Prediction of potential genes in microbial genomes Time: Thu May 19 21:11:19 2011 Seq name: gi|292606609|gb|ADGG01000001.1| Fusobacterium sp. 1_1_41FAA cont1.1, whole genome shotgun sequence Length of sequence - 54683 bp Number of predicted genes - 57, with homology - 50 Number of transcription units - 25, operones - 14 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 128 115 ## - 5S_RRNA 128 - 183 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 423 - 485 7.1 2 2 Op 1 . - CDS 488 - 1801 1136 ## COG2610 H+/gluconate symporter and related permeases 3 2 Op 2 . - CDS 1783 - 2574 734 ## gi|294781730|ref|ZP_06747063.1| conserved hypothetical protein 4 2 Op 3 . - CDS 2583 - 4235 1473 ## COG1091 dTDP-4-dehydrorhamnose reductase 5 2 Op 4 . - CDS 4268 - 4657 326 ## Lebu_1090 hypothetical protein 6 2 Op 5 . - CDS 4654 - 6885 1908 ## Lebu_1089 CRISPR-associated protein DxTHG motif protein - Prom 6908 - 6967 6.9 7 3 Op 1 . - CDS 7071 - 10634 3297 ## Daci_4191 cold-shock protein DNA-binding 8 3 Op 2 . - CDS 10634 - 11317 923 ## COG1401 GTPase subunit of restriction endonuclease 9 3 Op 3 . - CDS 11389 - 12612 1300 ## COG1401 GTPase subunit of restriction endonuclease 10 3 Op 4 . - CDS 12624 - 13223 940 ## gi|294781735|ref|ZP_06747068.1| conserved hypothetical protein 11 3 Op 5 . - CDS 13210 - 13680 456 ## gi|294781736|ref|ZP_06747069.1| hypothetical protein HMPREF0400_02268 - Prom 13769 - 13828 5.0 12 4 Op 1 . - CDS 13845 - 15335 1251 ## gi|294781737|ref|ZP_06747070.1| hypothetical protein HMPREF0400_02269 13 4 Op 2 2/0.000 - CDS 15322 - 15732 476 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 14 4 Op 3 . - CDS 15779 - 17572 1842 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 15 4 Op 4 . - CDS 17559 - 18644 1257 ## gi|294781738|ref|ZP_06747071.1| conserved hypothetical protein 16 4 Op 5 17/0.000 - CDS 18641 - 20083 1490 ## COG0515 Serine/threonine protein kinase 17 4 Op 6 . - CDS 20076 - 20780 780 ## COG0631 Serine/threonine protein phosphatase 18 4 Op 7 . - CDS 20780 - 21220 555 ## gi|294781741|ref|ZP_06747074.1| conserved hypothetical protein 19 4 Op 8 . - CDS 21210 - 23891 2309 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 20 4 Op 9 . - CDS 23888 - 24094 297 ## gi|294781743|ref|ZP_06747076.1| conserved hypothetical protein 21 4 Op 10 . - CDS 24087 - 25247 1240 ## Daci_4201 hypothetical protein 22 4 Op 11 . - CDS 25250 - 25519 474 ## Bpet4178 hypothetical protein 23 4 Op 12 . - CDS 25544 - 26233 928 ## COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain - Prom 26266 - 26325 10.6 24 5 Op 1 . - CDS 26334 - 27164 885 ## FN2078 DeoR family transcriptional regulator - Prom 27194 - 27253 8.2 25 5 Op 2 . - CDS 27420 - 27632 373 ## gi|294781748|ref|ZP_06747081.1| conserved hypothetical protein - Prom 27723 - 27782 11.6 - Term 27719 - 27757 5.2 26 6 Op 1 . - CDS 27787 - 28308 780 ## COG2109 ATP:corrinoid adenosyltransferase 27 6 Op 2 . - CDS 28374 - 28583 96 ## - Prom 28640 - 28699 5.9 28 7 Tu 1 . - CDS 28701 - 29888 1466 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 29916 - 29975 11.9 + Prom 29892 - 29951 12.7 29 8 Op 1 . + CDS 30174 - 30437 368 ## FN1563 hypothetical protein 30 8 Op 2 1/0.000 + CDS 30451 - 31455 1169 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 31 8 Op 3 . + CDS 31455 - 32180 755 ## COG1496 Uncharacterized conserved protein 32 8 Op 4 . + CDS 32185 - 32754 865 ## FN1560 hypothetical protein + Term 32761 - 32794 5.4 - Term 32738 - 32790 7.1 33 9 Tu 1 . - CDS 32795 - 34294 1650 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain - Prom 34403 - 34462 8.2 - TRNA 34482 - 34556 72.4 # Gln TTG 0 0 + Prom 34353 - 34412 4.4 34 10 Tu 1 . + CDS 34560 - 34709 107 ## - Term 34550 - 34596 -0.6 35 11 Op 1 1/0.000 - CDS 34693 - 35439 796 ## COG3022 Uncharacterized protein conserved in bacteria 36 11 Op 2 1/0.000 - CDS 35440 - 35997 747 ## COG3758 Uncharacterized protein conserved in bacteria - Prom 36036 - 36095 7.9 - Term 36069 - 36119 6.1 37 12 Op 1 2/0.000 - CDS 36129 - 37430 2001 ## COG0148 Enolase 38 12 Op 2 . - CDS 37454 - 38872 2003 ## COG0469 Pyruvate kinase - Prom 38931 - 38990 12.4 - TRNA 39013 - 39089 91.8 # Met CAT 0 0 + Prom 38847 - 38906 8.0 39 13 Tu 1 . + CDS 39094 - 39321 578 ## - TRNA 39095 - 39171 89.3 # Ala TGC 0 0 - TRNA 39186 - 39261 91.2 # Gly GCC 0 0 - Term 38965 - 39000 2.1 40 14 Op 1 . - CDS 39233 - 39415 75 ## - TRNA 39278 - 39361 68.7 # Leu TAG 0 0 - TRNA 39385 - 39460 81.3 # Thr TGT 0 0 41 14 Op 2 . - CDS 39423 - 39737 546 ## - Prom 39885 - 39944 7.6 - TRNA 39469 - 39545 95.0 # Asp GTC 0 0 - TRNA 39553 - 39628 94.0 # Val TAC 0 0 - TRNA 39645 - 39719 66.8 # Glu TTC 0 0 - TRNA 39727 - 39802 92.5 # Lys CTT 0 0 - TRNA 39808 - 39883 93.2 # Gly TCC 0 0 - TRNA 39936 - 40009 68.6 # Cys GCA 0 0 - TRNA 40023 - 40098 87.4 # Phe GAA 0 0 + Prom 39866 - 39925 11.1 42 15 Tu 1 . + CDS 40103 - 40231 121 ## + Term 40378 - 40415 1.2 - TRNA 40104 - 40180 95.0 # Asp GTC 0 0 - TRNA 40188 - 40263 94.0 # Val TAC 0 0 43 16 Tu 1 . - CDS 40343 - 41089 1070 ## FN1780 hypothetical protein - Prom 41305 - 41364 8.2 44 17 Op 1 1/0.000 - CDS 41410 - 43893 3630 ## PROTEIN SUPPORTED gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P 45 17 Op 2 . - CDS 43899 - 44168 370 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 44404 - 44463 12.7 + Prom 44200 - 44259 12.5 46 18 Op 1 8/0.000 + CDS 44403 - 44999 612 ## COG2452 Predicted site-specific integrase-resolvase 47 18 Op 2 . + CDS 44992 - 46152 986 ## COG0675 Transposase and inactivated derivatives + Prom 46154 - 46213 5.4 48 19 Tu 1 . + CDS 46355 - 47179 1192 ## COG4820 Ethanolamine utilization protein, possible chaperonin + Prom 47186 - 47245 10.2 49 20 Op 1 . + CDS 47271 - 48536 1976 ## COG0172 Seryl-tRNA synthetase 50 20 Op 2 . + CDS 48520 - 48996 266 ## FN0109 hypothetical protein 51 21 Op 1 . - CDS 49113 - 50243 1374 ## EUBELI_20462 hypothetical protein 52 21 Op 2 . - CDS 50236 - 50895 888 ## gi|294781769|ref|ZP_06747102.1| conserved hypothetical protein - Prom 50921 - 50980 12.8 + Prom 50905 - 50964 13.0 53 22 Tu 1 . + CDS 51155 - 51325 70 ## gi|291461158|ref|ZP_06600286.1| riboflavin synthase alpha chain + Term 51331 - 51380 4.1 - Term 51314 - 51371 15.6 54 23 Op 1 . - CDS 51384 - 53060 2503 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 53149 - 53208 10.3 - Term 53190 - 53237 1.2 55 23 Op 2 . - CDS 53275 - 53754 682 ## COG3212 Predicted membrane protein - Prom 53782 - 53841 12.6 56 24 Tu 1 . - CDS 53928 - 54272 130 ## COG1672 Predicted ATPase (AAA+ superfamily) - Prom 54391 - 54450 7.6 + Prom 54388 - 54447 8.3 57 25 Tu 1 . + CDS 54469 - 54682 247 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606609|gb|ADGG01000001.1| GENE 1 3 - 128 115 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ILGCPKIIISGISIRFQMLSLTVRQVLYALLTRPPPKPKFK >gi|292606609|gb|ADGG01000001.1| GENE 2 488 - 1801 1136 437 aa, chain - ## HITS:1 COG:BH3897 KEGG:ns NR:ns ## COG: BH3897 COG2610 # Protein_GI_number: 15616459 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Bacillus halodurans # 6 431 2 421 427 209 32.0 9e-54 MEINTIGLLLTFILLIFLIFKGWNIWIISIISTLFLALTNSLNIEEVIFETYSSFFKNFV GNWFLLFILSSIFGKIMEKSGASVIIAKSLASKIEEKRAILIILIITFILSYGGINIFVI VFSVYPICLFLFSKLNIPKEVCPGLILAIPASITMVVFPGTPSIQNTIPTKYFGTTIYSA PLIGILTSIFIFLCDYYFYSYVIKKLKKTDKKFILDEGEKLENIEKKNTKLEIILAYTPL LTLLVINYCLINIFAMKSSNFALCIGISISIILSIVIFRKNLNIKKDLEIGIKNGVEVLF MTASIISFGGVVSKTTAFKSIVDWTIKIKASPLTSMFIVINIICMITASSVGGLTIYLEN FSLELLKTEIPVEVLHRMAAIASSGLDAMPFASGIIVVNTIAKTKLKDTYKYIFVSQCII PMLSYGVACFLYALKIN >gi|292606609|gb|ADGG01000001.1| GENE 3 1783 - 2574 734 263 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781730|ref|ZP_06747063.1| ## NR: gi|294781730|ref|ZP_06747063.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 263 1 263 263 464 100.0 1e-129 MEIQVKNNILLIKPESLFEEKILNSEYFQSKLAYRITDELVEEKFKITFNGDIFFIDEKN NIANIGDKNLTEGRLFYMLRMIVDRYIVCNEGIGLHSGLAYGKGKAFFLIGDTKSGKSFY VKKLKENNIEVLGDDHTIVLNNYIMGNSKSRVRDNDGEHYEDNSPNIKYLNNYLVFDINI SGKKEISEISFENYVKILDFKPVLKYLYCGIETESQDIKIDSEIIENYRKRYLNFLKNAE KIIKINGNHFEDNKRCDIWKLIQ >gi|292606609|gb|ADGG01000001.1| GENE 4 2583 - 4235 1473 550 aa, chain - ## HITS:1 COG:APE1179 KEGG:ns NR:ns ## COG: APE1179 COG1091 # Protein_GI_number: 14601229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Aeropyrum pernix # 251 548 7 293 305 130 31.0 6e-30 MEELAKYQNLVSTINYMEEFCKERLLNLVIIGSVAYKGLNEREIYGDLDCIIIYDDLNKI EGSPFLNSNFFEIIKESIASKTIDLFATKLMLNDVKVSLDFVDINYLKNMINSGFKENEV LLRKLTDAEEYPFNDYYNFKGEKYIYEKVKEKKDEYNIYILPKYLKINGDFFSGVLHNKF IHNPNFKVIFNKEILSLHQEILLKYKEFYREEQKTKGDLDIIKSIRNWERFSKESRAFIY KIFDVETKEKRILITGINGFIGQYIGKELVKDFQIIGLDVVINKEKIWDKFYLGDIRDRN LLEEIFLQNKIDIVIHLGAEKALIKCENNKKECYEINYQATMDLYRLSKKHQAKFLFISS DQVFDGKLGNYKEDSLCSPINYYGELKLKVENDLLKEKDKNITICRTALDFGKIPENQRE IFDSVKKNDKLLVQGFIIDHIIYKLKSREKIILPQNEYMSPTSVELIYRQIKEVINKNIN GILHCCGGERISRYEFGLKIAKFYNLDSQYISPEDSNDPLRPKDVSLNVEESQKKLGFIF DNIEEMLKKL >gi|292606609|gb|ADGG01000001.1| GENE 5 4268 - 4657 326 129 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1090 NR:ns ## KEGG: Lebu_1090 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 129 1 129 130 90 47.0 1e-17 MKKVEHKVIVFLSHDLDDIQKNELKVKYGVEEIIFLPEDLQKIWSNVFCDENYEKDLEKL KIFMNKNLKEKDCIIAQGNWGYVYTLVTEAKKNGFIPLYGFSYRDGEDKIVNGEKIRISK FKHVKFMEY >gi|292606609|gb|ADGG01000001.1| GENE 6 4654 - 6885 1908 743 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1089 NR:ns ## KEGG: Lebu_1089 # Name: not_defined # Def: CRISPR-associated protein DxTHG motif protein # Organism: L.buccalis # Pathway: not_defined # 2 700 3 673 710 119 26.0 4e-25 MSNILMFSLGNKLNEKSQNASCIFNNQMHLNKYFLEVYFQEIEFDKIICFGNSNSSWDFL YKLMYLKYYGEKACEENLEFLKEIPDLETIKEFFLNDEKLKDKIIIKYFEEDLAKKEMID YIYELQELMMNSEKIWVDITGGKRDLPIFVVQLLNLIVGKNYKKNNIEILYTKEKDRDRK IYETISLKDFLDKLDYTDEISAFSKYACPMKFMGRLKDNKLKYILKKIYVYTQYNLTSEL VESLKNFKSKKWQYTVYIQRKIIETKIEQWRKLLSKTLEKDTLLDYHLELSNEPLGIIAK YEATNLSNLRNIRNSIVHPYSMKGVSYEILHKTIEENFYQNTKKEKYSEVLIVNIGNANN YEVVSYKKQNLSTRFSFKALMKDAKFEKIFLIGLYSNAWNKFIDNWILEEKLDIKRENDI TIDIPEKEFEETLNKELKKLDKKFEAIVIDNSFSEIERNKYFEKIAEKLIRGGKKYSITY DFTFSFRDISFLNYINLHCLELLGMIRIKKLVYIPIIKKGIVDVKDLDRVNSVMNLFKTV DEFKSYNKFDEKIDINVELKKLMEKISKVYNFNQISIVDKMKNEIENFHFVENKIEEDIL NFIKEKYIYKGTNKYLKAKETVRNQLGFNNFAQALFLLWDLILKMLIEKDMPNKEAEQRI KKDFLEESSRYGHKELYDFYKKYEYLNIIRNEGAHINLREMYFPLEKIEEEIEKCLKELD ALLENKEAYNKSFLQYEKDVKKK >gi|292606609|gb|ADGG01000001.1| GENE 7 7071 - 10634 3297 1187 aa, chain - ## HITS:1 COG:no KEGG:Daci_4191 NR:ns ## KEGG: Daci_4191 # Name: not_defined # Def: cold-shock protein DNA-binding # Organism: D.acidovorans # Pathway: not_defined # 67 497 64 480 1111 140 26.0 5e-31 MGNFIKTYKELCEKYNYEDLGINAKDIFELQDWIIKFENTSKKDYSEYFDYNLDNFLENY HEEIEKKDILLHILEKVKNSILYIMNNMRTKIIREDIMLPASKVKEINSKGIIWLSRKPG DTIRKKLASARNMLSIKRRLSIDTGENRLFVEFLKQIKYYLELRLDNLPKELTEKLFIEL YTIIDIFLKNDELEEVKRWTNLPPNNTLLSDQNYRKIWNAWNELRDLDIDIEKYSNKSEA YKRIDIVDNLKKILKARGNNYIFPQLPFKVDIKDYKIEEDRPIMAISPENKLVKLADIKN TKLKEKYNRKEEEVLINEKIISTDLFHIKPICVNENDEILNFNNKILFQQFSQNNFVSCE KSQAIFFNENIETFSFSKTLFSKILNENDKTEENFRRVMKIIERNIKSNILNTTFPDILD PFQVSTLSKKLRLSYKKVRILPRSIASVYALDDNEIFKNEYKNNENILIFDIVNKKITFT LLRGKEEESYSNFIWERHWTNKKEIDNSFFQKLEEILKIDNLALEELYSLGEIEDLIKGF EKLKLILNNNKIFEITSEMVDSIKNNKIDISEIVDEILKNNQEITKENLHIITLKNNLEI NENYYKTFTNLKLEELVVGCSRYHKILNELNKDKKNEVILWKDYLPYLGIKKMYGRFDLI KAKEAILPTYNQRQSIPVKEHITLIKGKDEHKFTLVGEDQNEEIIYEAFVKHRNTLKEDI ECKLELSYTYGSDDPYELYFTPVKSKEFTRVKVVWEERKEYEYKNLKYPQFPDREDWDNP EIQKIISNKEYLFLSFTNWCLLNTENINLDLLKGNSLILKDDYISKNLYIPYEKYNINLN TLNEEHIRLKLFFNEEELKIMKENKTISFFVKKKTKGVSDYKLENIVNLWKTDKNGELFI KTNADIIGKESYKILFIYQDKFLIPEDCNSYLNQIEFNIENHKGHYRAINIKVSNKKYVD YEIMGVKKGVNKILGGINPIYNGSLIFLLHTLFADGKSIEDFTCPKDFKEYLKDISKFLV EMYNVIEDKGYIFYILSLISKDLGEDYYNIALDIIEKEKIKTIRKNNIIKFIGYGLGNLN NEYSKKLFNSIEKSSLNFEEKVEILSKAIWKNRDFIFNINKELLINYFENSIDVLENKLK NGVDNQKRWQILGITYILELIYSVFRYREFYKNDEELLRRLSLNNIF >gi|292606609|gb|ADGG01000001.1| GENE 8 10634 - 11317 923 227 aa, chain - ## HITS:1 COG:HP0452_2 KEGG:ns NR:ns ## COG: HP0452_2 COG1401 # Protein_GI_number: 15645080 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Helicobacter pylori 26695 # 1 213 112 292 297 108 35.0 7e-24 MNQDETTKALSDKVLDRGIIINFPRPKTLESRKEMKNINTIIEKNKVKMLPEDIWKKWLN NREEDTSSDAQKKRIEEYKKIIEDINNELERVGRALGHRVWQSIEHYIFNHPYVRAQYEI EKKQEKDLGDELSNELKNNMDLAFEDQIVQKVMPKLRGIETRGKGQEVLDEILKILSDEN FDNLKRDFNFAKEQGFGQFVWGSADYLDKGKFELSSNNNDNEIEKEN >gi|292606609|gb|ADGG01000001.1| GENE 9 11389 - 12612 1300 407 aa, chain - ## HITS:1 COG:HP0452_2 KEGG:ns NR:ns ## COG: HP0452_2 COG1401 # Protein_GI_number: 15645080 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Helicobacter pylori 26695 # 322 395 1 79 297 83 58.0 1e-15 MSKEIDKKRKEDLKELEKEKEKEEKVLEELKKEIEKINNQKIQNENEQKRLELENKRINQ FEKVLESKISEEKERERKIVEIELNQVKEKFEEISEKYKDVLEKLKKFNDISENYGSIEN IHKIIKDKEKQIKDLNNELVNRPTNEALEGYNDLKKELEDYKNKNKDLNDELNSYDTEII EVDTLKREKRNLINEIDTLKLDYTHEKEEKEKLSARLSRIMTPEGALLTEAERIQQIKGS GLDYEAYPEKYLETDMNELSWLEKIEKTSEEYGIKLNKRILYAFHTALKISDWSIITVLA GVSGTGKSELPKLYARFGGLNFISVPVQPNWDSQESMLGYFNSIDNRFDTQPLLRFLANC IDEEKYNKYMSLVLLDEMNLAHVEHYFAEFLSKLEERRGKVKKIYHI >gi|292606609|gb|ADGG01000001.1| GENE 10 12624 - 13223 940 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781735|ref|ZP_06747068.1| ## NR: gi|294781735|ref|ZP_06747068.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 199 1 199 199 204 100.0 3e-51 MGKNKNKQKELVNDLDIKNIGQVKAESVESTVDNSIEKDNKIKELEREIKKLNGFEEEYK RLKSLEIAAEELKKKEENLNSRESQIKILEEKLKDKERNLQTQRKELEGSLEKDRNFLEI EIKRVDSLEKSINKEAERLTEKANKLNDQEIDLKEREIKINEKEKTLEEDLRKERTRFEL EEKNKIREELNNFYENEKK >gi|292606609|gb|ADGG01000001.1| GENE 11 13210 - 13680 456 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781736|ref|ZP_06747069.1| ## NR: gi|294781736|ref|ZP_06747069.1| hypothetical protein HMPREF0400_02268 [Fusobacterium sp. 1_1_41FAA] # 1 156 11 166 166 243 100.0 2e-63 MISPNKKESELPKGNDYIITLTRIIEDFLTYLDYEKIKYSNIEEAIQNIESFYGKKLSDS LRYTNSKRYINELKGEKSSLGAKVIVFLSSLKGDYESLLENLIKENFIELIEELIELRGH RNNIENNLKDIGEINLLRDRLFKSLKLIGGYCYGEE >gi|292606609|gb|ADGG01000001.1| GENE 12 13845 - 15335 1251 496 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781737|ref|ZP_06747070.1| ## NR: gi|294781737|ref|ZP_06747070.1| hypothetical protein HMPREF0400_02269 [Fusobacterium sp. 1_1_41FAA] # 1 496 1 496 496 793 100.0 0 MAQSKVLSLFGSKNINSLFEDIELLGKPKDVFYEVQSYNILVSVYQDNDEKSNIFEETIL KLLSIMELSIEKISEKLCLEKAFIKYLVESLETKGLINEKMEVTSYGKNLLESYNTDEGK IEQKLFKIFVDIRSKQILPFIYTDIENFETELIENETKDSLEIKVGNKTDERTIKGKKII FNGEDVFNIESFDIIKAIKKYNRIAEKTTYSKINWLGSSKIEITKSDKIFLHLQIGLQNG NIDEPFISDGFVPQIKLLLDTIKNSTIFKKIREQESSSTISYSQEKIGRESQNTLSELIK DINEEINYLQFLENNRDEIKERISREKDVVKNIFSLVEISLFTYLKENPLSNEKLNKFKE NEPDVNLEILKKMALEIGLNIDEENSSREESLLLSFSRIRINNVFNPPDIKVLLPYIIIK AKYDSNNTFHKIVNENRNILKDLYCLKKMADSSGHTTKVDLLTLYNQYSFDNNKFNNSMD LINSIFKNIKSLLKTY >gi|292606609|gb|ADGG01000001.1| GENE 13 15322 - 15732 476 136 aa, chain - ## HITS:1 COG:HP0447 KEGG:ns NR:ns ## COG: HP0447 COG1112 # Protein_GI_number: 15645075 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Helicobacter pylori 26695 # 10 132 251 360 360 84 42.0 5e-17 MITSGKGEKLTYGVISFYKAQVDEITEKLKKEGLSNKVKVGSVDAFQGMEFDVMFLSVVR TNTKESLNSSFPYGFLASENRLCVALSRQKRLLVVVGDSDIFHSNEWKELARKNVPAMVN LYELCLKEGEVIDGSK >gi|292606609|gb|ADGG01000001.1| GENE 14 15779 - 17572 1842 597 aa, chain - ## HITS:1 COG:HP0447 KEGG:ns NR:ns ## COG: HP0447 COG1112 # Protein_GI_number: 15645075 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Helicobacter pylori 26695 # 386 592 15 223 360 132 37.0 2e-30 MSKNKKKKKDNNRIKIYKINKEENSIIVENFNIKNIEKKHLILSILGDQLQIERREKARD KIKEGKAAMPTIGLILNGSLENIEKLMENKIDKIESLTPFVKEKIFKNEPTQKQKEAIEI ALNTPDIAVIQGPPGTGKTTVITAIIERLNERVDKKEDNKGKILITSFQHDAVKNVISRL RINSLPTLKFGRKDEDDFFTEKEIENWCEEVKDKLKQNVLSLEKNLKKEEILNLYKEYLI LPSEYTEEKLLLAIKRISVNSELIERIDTYLSESSFKEDSILLNNVRKFRTTKEGFLDGG AEICYNIYISLKELVKNNKKFENTLKLLEKGYLIKDNEVDENFLKSMFTLKNNLLNILIP KPVYKKERINNEIKEIYKIAEQELCASKDEEEKIIFNFYNEISNNSFFIKKILENYCFVY SATTQQSEGVEIRKAKGEVWEDPIYDVVIVDEAARVNPLDLMIPLSQATKKIILVGDHRQ LPHVYNEDIFDELQNDGEIDENLREKGIRQSMFEYLKEKADELEKKDNIKRTITLDRQYR MHKLLGNFINQNFYEVYNEGFHSPLEDEIFKQDFYKTPLVWIDVKNTVDKENKKRNK >gi|292606609|gb|ADGG01000001.1| GENE 15 17559 - 18644 1257 361 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781738|ref|ZP_06747071.1| ## NR: gi|294781738|ref|ZP_06747071.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 361 1 361 361 538 100.0 1e-151 MKVKDINFLKESMQKIKCEVIKPKIGKYEEIKGKFEKDGVIEVSDKKDEYLYIHNELSVS FKIVDKNQKNKLDDYFLRKYKNIAYIDSTFVTKDELKIFITIYFFYPDDRLNQNFSLYIN EEMKKKYSKELSGEYEKNFYISNGNNRYYIYSITEDTIKLFGRDYYLEFQLEEEDTVFKD EKLNFFEIKKIGKYSKKEKNFFVASLLKLGIGRSIKILDKKEHVSNSIAKRIKEDRGYLN LWEKYASIEGDFLINKARQIGEIKIKSTSNLEGGYRVLYLENREQIEKLKVGDCLELQKK LPSYFSNEENEEMNWNDYRNECKIRKMEDEESDMEDEEILDDNLFSETMDIPQFIVENEQ K >gi|292606609|gb|ADGG01000001.1| GENE 16 18641 - 20083 1490 480 aa, chain - ## HITS:1 COG:HP0432 KEGG:ns NR:ns ## COG: HP0432 COG0515 # Protein_GI_number: 15645060 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Helicobacter pylori 26695 # 13 282 4 277 296 89 27.0 1e-17 MDKKSGNLLTSGEKILDLNENEHVVRNFIAGGGQGEIYSTKDPSIALKINKKNDNNELFE TLLRLPIPKNINITLPIAILKEKSGYIMFFLEKMIPFEKVFGRNLLPQKGDVINSWLKSL DTEENRVLFNDFYNFQKTGGKAKRLLAYLKCGIIMAKLHTNGLVYCDFSTNNVFISENIE YNNVYFIDADNLNFQEYTKKQGYYTPWFAAPEVVNGRGCTYYSDDYSLILSFFWDLVGIH PFKGQKLDTEDDFDMEDFSDNLEEKAMTGILPWIRDKEDDSNFKDKGTYDLLVKENSELD ILFDRTFSQKGKEKKLTRPTSFELTYEIIKEFDRTIKCKNCEMEYVIRNEGNKCSWCDCT HNKILKVNTFKLYPNGKKNKIWDFMKEIKIDKDEISIPVRIAEDFLIDRLEEELFKIKFV DEAMIVCYFNEEFEFKLADDKNEKKLYEKVKIEKKKNIQLFCDKKNSPFVKNILIEVEII >gi|292606609|gb|ADGG01000001.1| GENE 17 20076 - 20780 780 234 aa, chain - ## HITS:1 COG:HP0431 KEGG:ns NR:ns ## COG: HP0431 COG0631 # Protein_GI_number: 15645059 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Helicobacter pylori 26695 # 3 177 7 175 228 69 33.0 4e-12 MKYGAYSEKGAYHKRNQDSFIIKKVRGIYVAGISDGLGSKKYSHVGSKLLCKSLLDTVYK VDDFEKISKEKLIELIFQNWLKKIKNLKKYPIEECSATFLFAIILKEKIIVSRIGDGFIS IFTDKNSYLLNDNKNDSFSNITMAFSKNFNIDNIEYLEIKNEKFNGLIACTDGIEISPNE NNVILRFSKELLEECKNNTKNKLDKETKKWIKEWPSSDDKTLVYLLDDKEEENG >gi|292606609|gb|ADGG01000001.1| GENE 18 20780 - 21220 555 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781741|ref|ZP_06747074.1| ## NR: gi|294781741|ref|ZP_06747074.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 146 1 146 146 249 100.0 4e-65 MKNNEKVFLLIDTSGSMIENEKSSILMYIYRPFKTIIGDRLLAYSWGDEIKEISKVSELK MQGKINNETTEKFLNNLEENSHLVIMSDGSFETDIFKKLEKKVNIYFVGIGSDVEKKILE YTFGKNNYFEAYDILNLANWLKREIS >gi|292606609|gb|ADGG01000001.1| GENE 19 21210 - 23891 2309 893 aa, chain - ## HITS:1 COG:jhp0061 KEGG:ns NR:ns ## COG: jhp0061 COG1674 # Protein_GI_number: 15611132 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Helicobacter pylori J99 # 64 837 28 750 806 219 27.0 3e-56 MRVKGLERIEDIILAMDDLISKKNKMINFIEKKYIKSNGNILSSEYDLYKEEKENLERNF KEKMDELLSILDNICKRVRKKQAALGELNKNNLNIGFNIPRKIAFGKRKIQYFDSVTKQK LMNDIYVPKLLEFPFKKNMFITGDEQIELLHQVYLRLLYALPIGKLEFYVFDPYGLGKAV ESFNSLFPNEKIFPNKKIIIEKKELKTTLDKLLAYTSELRHNKFNSEQKNWEEYNRFLYS KGEYNKILPYKIFTFMNVPDEMGEEEFNAYRKLLRNSEDCGVLIISSFNETILEGEDTRR QGKALELKKCIEDSYPLDDLLNSKTDKIETQNFVIKNISEKTPDRQKIQEKIDIFLKELE EKKNRLDNLSIFLDENNRFNRKSQLECQIPIGFDSKTNEIIEIKVGDNPVHYLIGGGTGS GKSTFLHSFILSACNRYSPNELKLYMLDFKEAVEFNVYANPVILPHVALVATDADISYGL SVLKHMTSLIKNRNKKFKLNGCKDINSYREKTKEGMPRIFLIMDEFQILFQSDLRDEVSE EMLIIAKQGRSCGIHMILSTQSLKGLDGFGNIAPQIGGRIILKSSAEDSKSLFGASDNNE EAAKIDKPYAILNVNSGYKEYNQKFIVPWHENKVEEKIANIKRFTEAKGLRIKNKVFDGS KNPSFPDENFFFNEGELTLKLGKILDYKSKDFEVKFGQEKDNNLLIIGIDKKIKRNLMNA ILLSIENNKDYKFIYVGKNRINVNLENRSSLLKIFNSIDSESINNSNIDEVLDLLKSKES KKIIIVDEVNLAFLKGYSLKGKDKELKEILDSMSYEGNIMISFYSKSKEATDNYVIDISR NIIAYNINDEERRKLTETKISTKDLLYIVNREAKVIFKNYAEKEIEEEVEDEE >gi|292606609|gb|ADGG01000001.1| GENE 20 23888 - 24094 297 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781743|ref|ZP_06747076.1| ## NR: gi|294781743|ref|ZP_06747076.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 68 1 68 68 115 100.0 6e-25 MFNGVIGYLSNERDRFNENVKDNFGNSIDLDMFYPIYQDLLKLQETYQNFKVKEAEINSL TMELRTII >gi|292606609|gb|ADGG01000001.1| GENE 21 24087 - 25247 1240 386 aa, chain - ## HITS:1 COG:no KEGG:Daci_4201 NR:ns ## KEGG: Daci_4201 # Name: not_defined # Def: hypothetical protein # Organism: D.acidovorans # Pathway: not_defined # 83 379 128 428 436 206 41.0 1e-51 MSGSKVFSLDIFESTINEVNQLVDETDNISKEVLSQCQRVLDETQSEERNSRFLLEEARM EEAMRLAEVISLTAGLPETAYELYQAEQAYEKAKARRERLEKRYELAQRCVEIATQNLEE TNSIFNSTLNNINQNKDNGLFRINRAYEDLKKYLSTLNSVSLNKVAEYINYNYKEKTPVR PDEIFKRLNLSSIEMTAILYDKYAKEEKFYNLINSYRKELETLSKEEIIIKLKKNLAGNL GEEIVIRAFAPYGKNVLTQERTVMEDGKYTKTDLILKDLKVPIILGKGEGMGAREGSDLA IEVKTGKSSYLYAQKEHMKFQSLGHLDSKLSCTICSKDIKDLSIEKEEELRNTMKNSGSP LFGMLPYKEELDKVCIDFVFGEDKDV >gi|292606609|gb|ADGG01000001.1| GENE 22 25250 - 25519 474 89 aa, chain - ## HITS:1 COG:no KEGG:Bpet4178 NR:ns ## KEGG: Bpet4178 # Name: not_defined # Def: hypothetical protein # Organism: B.petrii # Pathway: not_defined # 1 87 1 87 89 79 44.0 4e-14 MSMAIANPEELRNFANTLQKYLENIEEETGVLTSAFSSLGDTWQDQQKNKFEEVLKELLA VLKRFEEDASEQIPHLLKMAEDLETYLGR >gi|292606609|gb|ADGG01000001.1| GENE 23 25544 - 26233 928 229 aa, chain - ## HITS:1 COG:HP0428 KEGG:ns NR:ns ## COG: HP0428 COG4245 # Protein_GI_number: 15645056 # Func_class: R General function prediction only # Function: Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain # Organism: Helicobacter pylori 26695 # 32 202 9 177 185 103 37.0 2e-22 MAFNPNNYKPATAKHLPVVLLLDVSGSMSGEKIENLYDATNEMIKVFSDAVSKEKIIDIA IITFGENVELHTPYTSVVDFKSRGLNPFLASGMTPLGTALRMAKDMIEDKETTPSNIYRP AVVLVSDGVPTDEWRGPLDNFKNNGRSSKCQRFAVAIGNDADNQMLKSFAECNENFFIAE NVSDIVDKFKQISMSVSVKAPSSVNNNISTNGLAFDNSSANKDDDDDEF >gi|292606609|gb|ADGG01000001.1| GENE 24 26334 - 27164 885 276 aa, chain - ## HITS:1 COG:no KEGG:FN2078 NR:ns ## KEGG: FN2078 # Name: not_defined # Def: DeoR family transcriptional regulator # Organism: F.nucleatum # Pathway: not_defined # 1 274 1 279 280 157 36.0 3e-37 MKKVRITVSDFMFEILKGDSEYFKVPVGKIGNTLFKYYIDKNLSKIKLEESSGKKVQFNL SKENEDIFFDILREKQAETEAELMRDIFFTYINNLRFKREEIIFNDTFKQVREAIKNNKK IGIKYHSTARIVNPYFIELSSKENRSYLFCYCEKNQDFRNYRISDIENIWNLQNEIYVKD EDYIEAIRKNFDPFLSYGNEIKVRMTEEGKALYERVNQNRPKLLKEEEDIYTFECSDKLA KVYFAQFYDEIEIIEPESLRESFKENFKRTYEMYIK >gi|292606609|gb|ADGG01000001.1| GENE 25 27420 - 27632 373 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781748|ref|ZP_06747081.1| ## NR: gi|294781748|ref|ZP_06747081.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 70 1 70 70 89 100.0 8e-17 MGKLSKTLTILGGAVLAGVAYSLWKDKQELEEENDELYEELANLKKKNMEQDLEDDIVEE TKENPEDIVF >gi|292606609|gb|ADGG01000001.1| GENE 26 27787 - 28308 780 173 aa, chain - ## HITS:1 COG:FN1790 KEGG:ns NR:ns ## COG: FN1790 COG2109 # Protein_GI_number: 19705095 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Fusobacterium nucleatum # 1 173 1 173 173 292 90.0 2e-79 MEKGYVQIYTGNGKGKTTAALGLITRAVGSNFKIFFCQFLKGRDYGELHTLKKFETVVHE RYGRGVFIRSKEFVTDEDRKLMREGYESLKSALLSKKYDIVIADEILGTLRYDLISVDEI KFLIENKPETTELVLTGRNAPNELIELADLVTEMKEVKHYFQKGVMARKGIEK >gi|292606609|gb|ADGG01000001.1| GENE 27 28374 - 28583 96 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITCLPLVFQELHKGSFNNNGRRSNLVKTINYLVQRKFLMISYNVIHLFFTLSSKFYFAT ASFFIFEKK >gi|292606609|gb|ADGG01000001.1| GENE 28 28701 - 29888 1466 395 aa, chain - ## HITS:1 COG:FN2053 KEGG:ns NR:ns ## COG: FN2053 COG1301 # Protein_GI_number: 19705343 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 1 395 1 395 395 619 92.0 1e-177 MKTKKIGLVPRLIIAIIVGILIGQFMPLWFVRIFKTFSTFFGLFLSFFIPLMIVGFVVSG IAKLTEGAGKLLGFTAVVSYISTIVAGTFSYTVAANLYPKLVSGISQRISFEGKDVTPYF TIPLKPPIDVTAAIVFAFMMGITISIMRSQKKGETTFNLFVEYEEIISKILAGFVIPLLP FHILGIFSEMAYSGIVFKVLGVFAAIYGCIFAMHYIYMLVMFSIAGGVSKKNPFTLIKNQ VPAYFTAVGTQSSAATIPVNIQCGLKNGTSPEIVDFVVPLCATIHLSGSMITLTSCIMGI LLLNGMPHSFGMMFPFLCMLGIAMVAAPGAPGGAVMSALPFLFLIGIDAQGPLGSLLIAL YITQDSFGTAINVSGDNAIAIYVDEFYKKYIKKAA >gi|292606609|gb|ADGG01000001.1| GENE 29 30174 - 30437 368 87 aa, chain + ## HITS:1 COG:no KEGG:FN1563 NR:ns ## KEGG: FN1563 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 87 1 87 87 137 81.0 2e-31 MYNELDLHNLDFKVALSVFKKKYNEALKRKDRREILVIHGYGANKLGHKPVLATNLRNFL SSNKDKLSYRLDINPGVTYVTPISRLE >gi|292606609|gb|ADGG01000001.1| GENE 30 30451 - 31455 1169 334 aa, chain + ## HITS:1 COG:FN1562 KEGG:ns NR:ns ## COG: FN1562 COG2876 # Protein_GI_number: 19704894 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Fusobacterium nucleatum # 1 334 1 334 334 546 79.0 1e-155 MYIRLKNNKMSARLNDFLEKNNIKYFIIMDKFDIKYAILYIPNDFNQENFKEIQDIAEVI KLTSPYKFVSREFKEADTIIDVKGHLIGGDNFMLMAGPCSVENKEMLSNIAKEVKKGGAI ALRGGAYKPRTSPYDFQGLGEVGLKYLREVADENNMLVVTELMDSDDLELVSSYTDIIQI GARNMQNFSLLKKLGKLDKPVLLKRGLSATINEFLLSAEYILAHGNQNVILCERGIRTFE TMTRNTLDLNAIALVRELSHLPIIVDASHGTGKRSLVGPLTLAGIMAGANGAMIEVHENP DCALSDGPQSLDFKLFDKVANNIRKSLHFRKDLE >gi|292606609|gb|ADGG01000001.1| GENE 31 31455 - 32180 755 241 aa, chain + ## HITS:1 COG:FN1561 KEGG:ns NR:ns ## COG: FN1561 COG1496 # Protein_GI_number: 19704893 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 240 1 241 242 330 78.0 1e-90 MNYIDKDIVDHEDYIEFTTFNKFNIKIFFTKKHYGSIPEKSKEEVAEDFSLNKTMLSCYQ THSDNVVLVDENTNSDYFPNTDGILTSNKNAAVLTKYADCLPIFIYDEETKIFGAVHSGW KGSYQEIVKKAIEKINPKNLSTINILFGIGISCEKYNVGKEFYEDFKNKFSKEIVDKVFS IRNNEFFFDNQLFNYYLLKEYGVKEEKMFLNNRCTFSENFHSFRRDKELSGRNGAIIFME E >gi|292606609|gb|ADGG01000001.1| GENE 32 32185 - 32754 865 189 aa, chain + ## HITS:1 COG:no KEGG:FN1560 NR:ns ## KEGG: FN1560 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 21 158 17 155 167 126 54.0 4e-28 MKNKLMVSFLALVLVACGSSGSLELSKQDKEKINGDVNVARQVLVQKAILKEASTEKLSD DDKYNIQQAKEEVEVSYYLQKKFATELNNIQVTEDEVRKYYDIHKAEIGNVSFEEIKDAI VAQINYEKQTAIVNKYYEDLLSKYKIEEILKKDFPEAAQPAVEAPAPAQAPAPEAAPAPA EEPKTEEKK >gi|292606609|gb|ADGG01000001.1| GENE 33 32795 - 34294 1650 499 aa, chain - ## HITS:1 COG:FN1559 KEGG:ns NR:ns ## COG: FN1559 COG3263 # Protein_GI_number: 19704891 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Fusobacterium nucleatum # 1 499 29 527 527 759 86.0 0 MLLVFISLGMIFGENGIFKISYDNYELSRDICSFALIYIIFFGGFGTNLSMARGIIKKSL ILSSLGVIFTSLLTGLFSHYVLKLDWYSSLLIGSVLGSTDAASVFAILRSYKLNLKENTA SLLEIESGSNDPFAYVLTIAFLTLSKGSLNLPLLLFKQVCFGLAVGYIFARVSRYIIRKV NNIDSGMSMALITASMLLSYSTSEFIGGNGYITVYLLGVLLGNIHFNKKSEIVSFFNGLT SIMQILIFFLLGLLVNPLEALKYAIPAVLIMTVMTLLIRPFVVYALISPMKSSRGQKLLV SWAGLRGAASVVFAILVVVANKERGMVVFNIAFIVVLLSIAIQGSLLPYFSKKLNMIDED GDVLRTFNDYSDTEDVDFITAEIDETHKWVGRQVKNLELMPSVLLVLIIRNNENIIPNGN TVIEKGDRIVLCGSSFVDKGTRINLYESMVDKNSKYINKSIRELDRNILIVLIKRDNKTM IPSGNTVLLEDDLLVLLDR >gi|292606609|gb|ADGG01000001.1| GENE 34 34560 - 34709 107 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVGIARFELAAPKAGALPGCAIFRFKIPYKSTTYKHYCQIFFSFFRNFF >gi|292606609|gb|ADGG01000001.1| GENE 35 34693 - 35439 796 248 aa, chain - ## HITS:1 COG:FN1762 KEGG:ns NR:ns ## COG: FN1762 COG3022 # Protein_GI_number: 19705081 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 247 1 247 248 315 81.0 6e-86 MKIIFSPSKEMREENIFENKKIEFTESPFKDKTNILIDILKQKSIEEIESIMKLKADLLT KTYKDIQNYDKLKYIPAISMYYGVSFKELELEAYSEESLKYLKDKLFILSALYGLSKPFD LVKKYRLDMTMSIVDKGLYNFWKKEINEYISSSFTKDEVLLNLASGEFSKLIDTKKINMI NIDFKEEKDGTYKSVSTYSKKARGKFLNYLIKNQIDCLEEIEKINLDGYNLNKDLSNSKN LIFTRKNF >gi|292606609|gb|ADGG01000001.1| GENE 36 35440 - 35997 747 185 aa, chain - ## HITS:1 COG:FN1763 KEGG:ns NR:ns ## COG: FN1763 COG3758 # Protein_GI_number: 19705082 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 184 1 184 184 342 94.0 2e-94 MNKVIKKEDWKVSVWAGGTTNEIFIYPEDSSYADRIFKARISVATTNNGEKSLFTKLPGV ERYISKLTGDMKLQHTGHYDVEMEDYQIDRFKGDWETYSWGKFEDFNLMLKGIRGDLYYR QIRGRCRLHLEKGSTIVFLYVIDGKINVNGIDLETEDFYITDDNILDVFGNNPKIYYGFI KEWDQ >gi|292606609|gb|ADGG01000001.1| GENE 37 36129 - 37430 2001 433 aa, chain - ## HITS:1 COG:FN1764 KEGG:ns NR:ns ## COG: FN1764 COG0148 # Protein_GI_number: 19705083 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Fusobacterium nucleatum # 1 433 1 434 434 765 95.0 0 MTGIVEVIGREILDSRGNPTVEVDVVLECGARGRAAVPSGASTGSHEAVELRDEDKSRYL GKGVLKAVNNVNTEIREALLGMDALNQVAIDKLMIELDGTPNKGRLGANAILGVSLAVAK AAAEALGQPLYKYLGGVNAKELPLPMMNILNGGAHADSAVDLQEFMIQPVGAKSFQEAMR MGAEIFHHLGKILKANGDSTNVGNEGGYAPSKIQGTEGALNLICEAVKAAGYELGKDITF ALDAASSEFCKEVNGKYEYHFKREGGVKDTDAMIKWYEELINKYPIVSIEDGLGEDDWDG WVKLTKAIGDRVQIVGDDLFVTNTERLKKGIELGAGNSILIKLNQIGSLTETLDAIEMAK RAGYTAVVSHRSGETEDATIADVAVATNAGQIKTGSTSRTDRMAKYNQLLRIEEELGAVA QYNGKNVFYNIKK >gi|292606609|gb|ADGG01000001.1| GENE 38 37454 - 38872 2003 472 aa, chain - ## HITS:1 COG:FN1765 KEGG:ns NR:ns ## COG: FN1765 COG0469 # Protein_GI_number: 19705084 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Fusobacterium nucleatum # 1 472 4 475 475 786 86.0 0 MKKTKIVCTIGPVTESVETLKELLNRGMNVMRLNFSHGDYEEHGARIKNFRQALSETGKR AGLLLDTKGPEIRTMSLEDGKDVSIKAGQKFTFTTDQSFVGNSERVAVTYPDFAKDLKVG DMILVDDGLIELDVTEIKENEVICIARNNGELGQKKGINLPNVSVNLPALSEKDMEDLKF GCKNNIDFVAASFIRKAEDVREVRRILHENGGDRIQIISKIESQEGLDNFDEILEESDGI MVARGDLGVEIPVEDVPCAQKMMIKKCNRAGKPVITATQMLDSMIKNPRPTRAEANDVAN AIIDGTDAIMLSGETAKGKYPLEAVEVMDKIARKVDPTIVPFFVKHVTSKNDITSAVAEG SADISERLNAKLIIVGTESGRAARDMRRYFPKADILAITNNEKTANQLILTRGVIPYVDA TPKTLEEFFILGEAVAKKLNLVEKGDIVIATCGESVFIQGTTNSIKVIQVKA >gi|292606609|gb|ADGG01000001.1| GENE 39 39094 - 39321 578 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVEISGIEPLTYAVQVRRSPKLSYIPIFNCFGAGNEARTRDPNLGKVMLYQLSYSRKIPM SVVRRERLELSRLGH >gi|292606609|gb|ADGG01000001.1| GENE 40 39233 - 39415 75 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGSTPISGTRKMKQTKYAGMAELADALDLGSSVPDVRVQVSLSAPRSLESCGNSSVGRA >gi|292606609|gb|ADGG01000001.1| GENE 41 39423 - 39737 546 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHHTLAPFVQWLGHQIFTLETGVQFPYGVPLKYLIWSHSSVGRAPALQAGGHRFKSYCD HHSSGGVAQLVRAPACHAGGREFEPRHSRHYICRFSSSGRATDL >gi|292606609|gb|ADGG01000001.1| GENE 42 40103 - 40231 121 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGVTRLELATSCVTGRRSNQLSYTPTIMVVTIGLEPMTPCL >gi|292606609|gb|ADGG01000001.1| GENE 43 40343 - 41089 1070 248 aa, chain - ## HITS:1 COG:no KEGG:FN1780 NR:ns ## KEGG: FN1780 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 248 3 247 247 414 85.0 1e-114 MSSAFTGFVLLNETKFDREKFLKDLKEDWKITLDLGDDSENKEKDMLVGNIGDIMVAVAL MPAPIPNNEAVENAKTNYRWPDAVKVAEEHKAHILVSLLGEPDLIEGAKLYTKIVSALTK QENCIGINVLGTVLNPDMYRDFTKYYEENDMFPVENMIFIGLYAVEDNKISAYTYGMEAF GKKEMEIIASSQNPEDIYYFLQGVADYVITSDVILQDGETIGFSAEQKISITHSKAIAVD GISIKLGF >gi|292606609|gb|ADGG01000001.1| GENE 44 41410 - 43893 3630 827 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 827 1 827 827 1402 85 0.0 MEIIRAKHMGFCFGVLEAINVCNSLIEEKGRKYILGMLVHNKQVVEDMEKKGFKLVKEEE LLEDIDDLKENDIVVVRAHGTSKKVHEKLKERKVKVYDATCIFVNKIRQEIEIANEKGYN ILFMGDKNHPEVKGVISFADNIQIFESLEEAMKVKIDSSKTYLLSTQTTLNKKKFEEVKK YFKENYQNVIIFDKICGATAVRQKAVEELAIKADIVIIVGDTKSSNTKKLYEISKKLNSE SYLVENEEQLNLSIFSGKKVVGITAGASTPEETIMNIEKKIRGTYKMPNVNENQNEFLEM LEDFLPSEEKRLKGRIEKKERNYSYLDVPGLPTTVIVKTEELEGYDVGTVVEVLKIGQLD EKEKEEYYILASRKKIELEKNWEKIEDSLKNGTVLEGEVTKKIKGGYLVQALFYPGFLPN SLSEIPENEEKVAGKKVQVIVKDIKHDKDKKNKKITYSVKDIKLAEQAKEFAGLEVGQTV DCVVTEVLEFGLAVDINALKGFIHISEVSWKRLDKLSDAYKVGDKIKAIVVSLDEAKRNV KLSIKKLEADPWATVANEFKVGDEVDGVVTKVLPYGAFVEIKAGVEGLVHISDFSWTKKK VNVAEYVKEGEKVKVKITDLHPEDRKLKLGIKQLVANPWDSAEKDYAVDTVIKGKVVEVK PFGIFVELTDGIDAFVHSSDYNWIGEETPKFEIGNEVELKITELDLNDRKIKGSLKALRK SPWEHAMEEYKVGTTVEKKIKTVADFGLFVELTKGIDGFIPTQFASKEFIKNIRDKFNEG DIVKARVVEVNKDTQKIKLSIKEIEREEAKREEREQIEKYSVSSSEE >gi|292606609|gb|ADGG01000001.1| GENE 45 43899 - 44168 370 89 aa, chain - ## HITS:1 COG:FN1782 KEGG:ns NR:ns ## COG: FN1782 COG1925 # Protein_GI_number: 19705087 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Fusobacterium nucleatum # 1 89 1 89 89 145 97.0 1e-35 MKSVKVHIKNKKGLHARPSSLFVQLVTKYDSDITVKSEDETVNGKSIMGLMLLAAEEGRE LELIADGPDEDAMLTELVDLIEVKRFNEE >gi|292606609|gb|ADGG01000001.1| GENE 46 44403 - 44999 612 198 aa, chain + ## HITS:1 COG:MJ0014 KEGG:ns NR:ns ## COG: MJ0014 COG2452 # Protein_GI_number: 15668185 # Func_class: L Replication, recombination and repair # Function: Predicted site-specific integrase-resolvase # Organism: Methanococcus jannaschii # 1 198 4 203 213 131 37.0 1e-30 MKKIYKPKEFSELINKSVNTLQRWDRTGILIAHRTPTNRRYYTLEDYNKVMGIEVTQNQV YEVIIYARVSNHSQKDDLQNQIKFLRDYANAKGYIVSEVITDIGSGLNYQRKGFNSILYS DKKQKILISYKDRFVKFGFDWFDKFLKSKGSEIEIVNNEDLSPQEEMIQDLISIIHIFSC RIHGLRKYKKQIKEDKDV >gi|292606609|gb|ADGG01000001.1| GENE 47 44992 - 46152 986 386 aa, chain + ## HITS:1 COG:Z3664 KEGG:ns NR:ns ## COG: Z3664 COG0675 # Protein_GI_number: 15802939 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 3 379 5 373 402 155 28.0 1e-37 MYKALKIELNLTNEQKIQVNKTIGTERFIYNEYIKYNQEQYELGNKFVSANDFSKYINNV YLPNNPDKKWIKDVSSKSVKQAMIYGEKAFKNFFKGLSAFPVFKKKAKNDLGAYFVKNNK TDFEFYRHKIKIPTLKFVRVKEYGYIPKNAIIKSGTITKIADRYFLSLVMEVDDIVKTEN KNIKGLGVDLGIKDTAICSNGMVFKNINKTKKVKKIKKKLKREQRKMSRSVEYSKSKKIK LKECKNFNKKKLKVQKLFYRLNCIRDDYNNKIVDEITRTKLKYITIEDLKVSNMMKNKHL SKAIQEQNFYAIRTKLVNKCKEKNIELRLVDTFYPSSKTCSCCGEIKKDLKLNDRIYKCC NCGIEIDRDYNASINLEKAKIYKVIA >gi|292606609|gb|ADGG01000001.1| GENE 48 46355 - 47179 1192 274 aa, chain + ## HITS:1 COG:FN1783 KEGG:ns NR:ns ## COG: FN1783 COG4820 # Protein_GI_number: 19705088 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Fusobacterium nucleatum # 1 273 1 273 274 421 83.0 1e-117 MNLDKVNKYIKEFEKTITKPKTDFDKSKFFVGVDLGTANIMITILDKDGKPIAGAAQRSR VVKDGIVVDFIGAISIVKKLKEELEEKLGIEITKGYTAIPPGVEKGSVKAIVNVVESAGI DVIKVVDEPTAASYVLGISDGVVVDLGGGTTGISILKDGKVVFVADEPTGGTHMTLVLAG SYGVDFETAEDIKTDKKREKEVCLQITPVLQKMASIVKKYISGHDVKDIYLVGGACSFED SEKIFAKELGLNIYKPYMPLYITPIGIALAGLKD >gi|292606609|gb|ADGG01000001.1| GENE 49 47271 - 48536 1976 421 aa, chain + ## HITS:1 COG:FN0110 KEGG:ns NR:ns ## COG: FN0110 COG0172 # Protein_GI_number: 19703458 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 421 4 424 424 783 91.0 0 MLELKFMRENVEMLKEMLKNRNSNIDMDAFVALDTKRREVLSEVEALKRDRNNVSAEIAN LKKEKKDANHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHSSTPIGPDEDSN KEIRRWGEPRKFDFEPKAHWDIGEGLGILDFERGSKLSGSRFVLYRGAAARLERALISFM LDTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIHRK EILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEKM VNNAETILQRLELPYRVIQLCSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQAR RMGLKYKVTNGSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLVPKVLIPYMGGIDVIK K >gi|292606609|gb|ADGG01000001.1| GENE 50 48520 - 48996 266 158 aa, chain + ## HITS:1 COG:no KEGG:FN0109 NR:ns ## KEGG: FN0109 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 158 1 158 158 202 91.0 4e-51 MLLKSSLFILLLVNIFTSNLLILSGILLVVLILNLCLNKNLKKHSRQLKVLLFFYLSTFL VQLYYGQQGKVLFKFYNFYLTQEGLMNFGVSFIRILNLVLMSWLINEMKLLTGRFSKYQK IIDTVIDLVPVVFVLFKKKMKAKNFTRYILKDINKRYE >gi|292606609|gb|ADGG01000001.1| GENE 51 49113 - 50243 1374 376 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20462 NR:ns ## KEGG: EUBELI_20462 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 22 368 27 394 394 283 43.0 8e-75 MSSENLRKKRNLIIEKIDNNLSEMNDIYEETNRVKTVAENTRVILDDLDKQFCEKTGLNS EEVALMFFAVGLQIARQYLLTKFPKRLSDKEAAKKVKGKKEEHSNRKHRYYNPSLEEIAS NPVPFDANIGSNGNLKGGGKMGHRVTTLGHDPILGLIFGTANIATSTLTTSSFLSFHIYT ENKRDYFKSKASTYKVLEATVNKTLYQGIEGKKIIATSFIKEIIHLQSDMYTKNSLPIPF ISAMNPKLASKLAERGLDMANILTVSKQVEYAIFINTIIAMLHSLFYDGNTEMEEKLHEV KTRKIIAYSDMIASASNLGVVAFTKNLNLLDIGGITVAILDFIKYKEFQKKVKEEFIFGS YKDMVMGDKYNMIDIQ >gi|292606609|gb|ADGG01000001.1| GENE 52 50236 - 50895 888 219 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781769|ref|ZP_06747102.1| ## NR: gi|294781769|ref|ZP_06747102.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 219 1 219 219 300 100.0 6e-80 MSLFNFFLGIPGLGDKEPDPVGTIKKMHTIFFRDVETERGKDATVEVAKKYEIILAEMTE KFEKIIEMMENKKEELSKESDNYLNELEELEKKAEKLEELLKTKIAGNYTYNNSNNSIFQ PQSIMGPNPDINIDIFEIFLDTAYKIKIKKGEIAYQKKYEELESMYKNKISILNQEFDKK EQSSDSDIKELTSTIKEILNEMAIVKEKIVKLEEGIWHE >gi|292606609|gb|ADGG01000001.1| GENE 53 51155 - 51325 70 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291461158|ref|ZP_06600286.1| ## NR: gi|291461158|ref|ZP_06600286.1| riboflavin synthase alpha chain [Fusobacterium periodonticum ATCC 33693] # 1 53 1 50 63 65 79.0 1e-09 MEILDKKSNRMSRVNLGVFEANLLASLPNLQRILDFLSLRNLLSNELFFTFLFIYN >gi|292606609|gb|ADGG01000001.1| GENE 54 51384 - 53060 2503 558 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 75 558 1 484 484 687 84.0 0 MFTLLFTTASAEVYEGTGYGYHQDGIVLGVEIKDNKIVDIQIKKEQESDFAKPAIKEIIK KAIATQSYEVDGISGASLTSEGTKEAIEEAVKASGAKLTKVDAALKTNTKLPRQADVVVI GGGGAGLTSAIAAYEKGASVILIEKTGLLGGNTNYATGGINAAGTKIQKAAGIEDSPELF YEDTMKGGKNRNNKALVKVLTGKSSAIVDWLLERGADLNELTSTGGQSAKRTHRPTGGSA VGPNIITALSNVAEKDKIDIRKGTKAIALVKNNNKISGVKVKEANGEEYIIKAKAVIVAT GGFGANAKMVEKYNPKLKGFGSTNNPAIVGDGIVMIEKIGGALVDMDQIQTHPTVLHKKT NMITEAVRGEGAILVNKDGKRFIDELQTRDVVSKAILDQKGKSAFLIFDEEIRTKLKDAD GYVKKGYAVEGTLEEIAAKIGTDAKTLKATLDKYNEAVRAQKDPEFNKTKFARELVGDKY YVIEVSPAVHHTMGGVRINTNAEVLGKNGRPIKGLYAAGEVTGGIHGANRIGGNAVTDIT VFGKIAGENAATYSKSVK >gi|292606609|gb|ADGG01000001.1| GENE 55 53275 - 53754 682 159 aa, chain - ## HITS:1 COG:FN2085 KEGG:ns NR:ns ## COG: FN2085 COG3212 # Protein_GI_number: 19705375 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 159 1 161 161 194 72.0 6e-50 MKRLLLVGAIIIGSLGFSTNALATLSQEQIKTIVKKEVPNGQLTKFELDRENGRKVYEVE VMDGNVEKEFKIDAETGEVIKFKTEKKVAKRAKKEPKISYDRAKEIALKQSKNGKFKEIE LKHKNGVLVYDVEVAEGFMDREFLIDAMTGEILRDKKDF >gi|292606609|gb|ADGG01000001.1| GENE 56 53928 - 54272 130 114 aa, chain - ## HITS:1 COG:FN0123 KEGG:ns NR:ns ## COG: FN0123 COG1672 # Protein_GI_number: 19703471 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 37 114 377 454 454 100 67.0 5e-22 MNFLIFLLSTDYILSYSSTCLGLPTSTSFGVLPSGGIVVEPLGENNKIVFGESKYSKKQV GLSILKQLQEKAKNIKWNNSNREEYFILFSKSGFSEELEELAQKEKNIILKKLI >gi|292606609|gb|ADGG01000001.1| GENE 57 54469 - 54682 247 71 aa, chain + ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 71 1 71 407 87 53.0 8e-18 MEKAYKFRFYPTKTQITILNCTFGCVRYVYNHFLGLKQELYNKEKKSMSYNQCSKALTVL KQEKEWLKDVD Prediction of potential genes in microbial genomes Time: Thu May 19 21:14:22 2011 Seq name: gi|292606608|gb|ADGG01000002.1| Fusobacterium sp. 1_1_41FAA cont1.2, whole genome shotgun sequence Length of sequence - 22294 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 9, operones - 4 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 266 399 ## COG0675 Transposase and inactivated derivatives + Term 478 - 513 6.0 - Term 459 - 508 11.2 2 2 Op 1 1/0.000 - CDS 518 - 802 524 ## COG2088 Uncharacterized protein, involved in the regulation of septum location 3 2 Op 2 1/0.000 - CDS 818 - 1702 844 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 4 2 Op 3 3/0.000 - CDS 1683 - 1982 385 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 2014 - 2073 9.4 5 2 Op 4 . - CDS 2144 - 5083 3135 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 5103 - 5162 10.7 6 3 Tu 1 . - CDS 5537 - 5758 181 ## FN0064 putative cytoplasmic protein - Prom 5914 - 5973 15.1 + Prom 6242 - 6301 6.8 7 4 Op 1 . + CDS 6526 - 6711 126 ## gi|237738599|ref|ZP_04569080.1| predicted protein 8 4 Op 2 24/0.000 + CDS 6732 - 7964 1292 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 9 4 Op 3 10/0.000 + CDS 7961 - 8998 555 ## COG1459 Type II secretory pathway, component PulF + Prom 9148 - 9207 8.1 10 4 Op 4 . + CDS 9233 - 9709 707 ## COG2165 Type II secretory pathway, pseudopilin PulG 11 4 Op 5 . + CDS 9694 - 10176 299 ## FN2092 integral membrane protein 12 4 Op 6 . + CDS 10173 - 10586 289 ## FN2091 hypothetical protein 13 4 Op 7 . + CDS 10593 - 11135 312 ## FN2090 hypothetical protein 14 4 Op 8 . + CDS 11104 - 11625 246 ## FN2089 hypothetical protein 15 4 Op 9 . + CDS 11618 - 12796 815 ## FN2088 hypothetical protein 16 4 Op 10 . + CDS 12801 - 13538 618 ## FN2087 hypothetical protein 17 4 Op 11 . + CDS 13538 - 15082 1855 ## COG1450 Type II secretory pathway, component PulD 18 5 Tu 1 . + CDS 15439 - 15960 835 ## gi|237738588|ref|ZP_04569069.1| predicted protein + Term 15990 - 16040 8.1 - Term 15984 - 16021 1.5 19 6 Op 1 . - CDS 16052 - 17398 1715 ## COG0166 Glucose-6-phosphate isomerase - Prom 17446 - 17505 12.8 - Term 17404 - 17456 0.5 20 6 Op 2 . - CDS 17696 - 18151 726 ## COG3086 Positive regulator of sigma E activity - Prom 18316 - 18375 12.4 + Prom 18242 - 18301 10.1 21 7 Tu 1 . + CDS 18352 - 18846 673 ## FN0018 hypothetical protein + Term 18926 - 18970 2.7 - Term 18843 - 18892 3.6 22 8 Op 1 . - CDS 18901 - 20154 1375 ## COG3177 Uncharacterized conserved protein - Prom 20185 - 20244 7.9 23 8 Op 2 . - CDS 20251 - 21246 969 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 21354 - 21413 10.6 + Prom 21388 - 21447 14.1 24 9 Tu 1 . + CDS 21496 - 21978 562 ## FN0015 hypothetical protein Predicted protein(s) >gi|292606608|gb|ADGG01000002.1| GENE 1 3 - 266 399 87 aa, chain + ## HITS:1 COG:DR0178 KEGG:ns NR:ns ## COG: DR0178 COG0675 # Protein_GI_number: 15805214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 1 86 295 380 409 112 54.0 2e-25 NIADVSWSEFSRILEYKAKWYGKTIVRVDKFFASSQICNCCGYRNEEVKDLSVREWTCPI CGAVHNRDINAAKNILKEGLKILGISA >gi|292606608|gb|ADGG01000002.1| GENE 2 518 - 802 524 94 aa, chain - ## HITS:1 COG:FN0022 KEGG:ns NR:ns ## COG: FN0022 COG2088 # Protein_GI_number: 19703374 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein, involved in the regulation of septum location # Organism: Fusobacterium nucleatum # 1 88 1 88 93 141 82.0 2e-34 MIVTNVKIKKVDGDKLDRLKAYVDITLDESLVIHGLKLMQGEQGLFVAMPSRKMRNEEYK DIVHPICPDLRNYITKVVEEKYNSIDEETTVEIA >gi|292606608|gb|ADGG01000002.1| GENE 3 818 - 1702 844 294 aa, chain - ## HITS:1 COG:FN0021 KEGG:ns NR:ns ## COG: FN0021 COG1947 # Protein_GI_number: 19703373 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Fusobacterium nucleatum # 1 294 1 294 294 422 79.0 1e-118 MRISLNKYKIFPNAKINIGLNVYQKAGDGYHEIDSVMSPIDLSDEMDITFYSEIGDLKIS CSDKNIPTDERNILYKAYEIFFENSKKHKEKIEISLTKNIPSEAGLGGGSSDAGFFLKLL NEHYGNVYNEKELEELAIKVGSDVPFFIKNKTARVGGKGNKVELVENNLKDSLILVKPLG FGVSTKDAYNSFDELDEVRYANFEKIVECLRNDNRKDLEKYIENGLEQGISERNADIKMF KAILNSVVPGKKFFMSGSGSTYYTFVTEIERSQIETRLRTFVDNVKIIISKTIN >gi|292606608|gb|ADGG01000002.1| GENE 4 1683 - 1982 385 99 aa, chain - ## HITS:1 COG:FN0020 KEGG:ns NR:ns ## COG: FN0020 COG1188 # Protein_GI_number: 19703372 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Fusobacterium nucleatum # 1 99 1 99 99 156 96.0 1e-38 MRLDKFLKVSRIIKRRPIAKLVVDGGKVKLDGKVVKAAAEVKVGQTLEIEYYNKYFKFEI LQVPLGNVSKDKTSDLVKLLDTKGLDIEINLDKDEDFFE >gi|292606608|gb|ADGG01000002.1| GENE 5 2144 - 5083 3135 979 aa, chain - ## HITS:1 COG:FN0019 KEGG:ns NR:ns ## COG: FN0019 COG1197 # Protein_GI_number: 19703371 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Fusobacterium nucleatum # 1 979 1 981 981 1456 86.0 0 MEKKFRGEIPFWLKNKKNSIVYVCSSNRNIDDYFFVLKDFYKGRILRIKKENENGELKKY NYDLLELLKSDEKFIILISLEYFLEDYYSKANSIFIEKGKEVDIKALEEKLIEAEFEKTY MLTQRKEYSIRGDILDIFNINQENPVRIEFFGNEVDRITYFDLDSQLSIEKLNSIELYID NNKDKKDFFSLMYTSKNKVEYYYENNDILQAKVKRLISENSDRENDIINKITELSKIGKQ TEIQKFTEEELKQFEVIDRIKKLSENTNIVIYSEEATRYKEIFKGYDIKFEKYPLFEGYR TEDKLILTDREIKGIRVKRERVEKKALRYKTVDEIAEQDYVIHENFGVGIFLGLENIDGQ DYLKIKYADEDKLYVPLDGINKIEKYINISDVIPEIYKLGRKGFRRKKARLSEDIEIFAK EIIKIQAKRNLANGFKFSKDTVMQEEFEEAFPFTETPGQLKAIEDVKRDMESGKVMDRLV CGDVGYGKTEVAIRAAFKAIMDEKQVVLLVPTTVLAEQHYERFSERFKNYPINIEILSRV QTKKEQEESLKKIENGSADLIIGTHRLLSDDIKYNDIGLLIIDEEQKFGVKAKEKLKKLK GDIDILTLTATPIPRTLNLSLLGIRDLSIIDTSPEGRQKIQTEYIDNNKDLIRDIILTEV SREGQVFYIFNSVKRIEMKSKELRELLPEYIKVDYIHGQMLARDIKRAIHNFENGNTDVL IATTIIENGIDIENANTMIIEGVEKLGLSQVYQLRGRIGRSNKKSYCYMLMNENKTKNAQ KREESIREFDNLTGIDLSMEDSKIRGVGEILGEKQHGAVETFGYNLYMKMLNEEILKLKG ENEEELEDVNIELNFPRFLPDNYIEKNEKIKIYKRALALKTFEELEELHKELEDRFGRLK SEAKGFFEFLKIRIRARELGIVSIKEDKEKRLLINFNEEKINVDKIIYLLANKKISYLKF TQTIGFEGDIFEFFDLYSN >gi|292606608|gb|ADGG01000002.1| GENE 6 5537 - 5758 181 73 aa, chain - ## HITS:1 COG:no KEGG:FN0064 NR:ns ## KEGG: FN0064 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 3 57 1 55 117 89 72.0 5e-17 MEMSKLLVKDLMNGKFELISDYIYQIENYVIRVPQGFVTDYASIPRIFRAIVLPYGKVGQ VLCMTIFIQRAVS >gi|292606608|gb|ADGG01000002.1| GENE 7 6526 - 6711 126 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237738599|ref|ZP_04569080.1| ## NR: gi|237738599|ref|ZP_04569080.1| predicted protein [Fusobacterium sp. 2_1_31] # 17 61 17 61 61 69 97.0 8e-11 MIKKLFLCFLFLFICLNIFSKQSKKNVVRIDIIGKNANRSYFIKFSDENNLNSFEVYDED N >gi|292606608|gb|ADGG01000002.1| GENE 8 6732 - 7964 1292 410 aa, chain + ## HITS:1 COG:FN2095 KEGG:ns NR:ns ## COG: FN2095 COG2804 # Protein_GI_number: 19705385 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Fusobacterium nucleatum # 2 410 6 414 414 671 88.0 0 MEKIENYFKKSINSSMDNNKNSLIEDIEELYIRENLSSNKGIFYILLEAIKFLASDIHIE ALNNIVRIRYRINGILKEVARIDKSFLAAISSKIKILSSLDIVEKRKPQDGRFSLRYKGR EIDFRTSIMPTMNGEKIVIRILDKFNYNFTLDDLYLSEENKRIFYKAINQNNGIIIVNGP TGSGKSSTLYSILKYKNKEEVNISTVEDPIEYQIEGINQVQCKNELGLNFATILRSLLRQ DPDILMIGEIRDKETAEIAVKASLTGHLVFSTLHSNDSLGCINRLVNLGIDNYLLSLVLQ MIVSQRLVRKLCPHCKKEDKNYKEKLKSLNLAEENYKDIKFYTSGACEKCMNTGYIGRIP VFEIIYFDESLKNMLAQKKEIKQNFKTLLENAMDKAKEGLTSLDEIMRQL >gi|292606608|gb|ADGG01000002.1| GENE 9 7961 - 8998 555 345 aa, chain + ## HITS:1 COG:FN2094 KEGG:ns NR:ns ## COG: FN2094 COG1459 # Protein_GI_number: 19705384 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Fusobacterium nucleatum # 1 344 1 344 346 416 73.0 1e-116 MRNQKEKILFFTNELALLIKSGLTFTKAIEIILKEEKNKKFKDILKKIHKNLTMGKNIYD SFKPFENTFGSTYLYILKIGELSGNIVESLEDISKSLDFDLSRRKKLGGILIYPIVVICL TFLIVSFLLIYILPSFITIFEENQIELPLVTRILLGLSRNFHYILIFIICILTIIFIFNM YINKNKYKRIRRDKFLLNIFLFGELKKLLLASNLYHSFSILLNAGIGMVESLEIMYMNNN NYYLKDRLFEVKKAILAGNNITTSFKNLNLYNDRFSILITVGEESGYLSENFLQISKILK EDFDYKLKKLLAILEPLVVLVLGLIVGFVVLAIYLPILSIGDIFI >gi|292606608|gb|ADGG01000002.1| GENE 10 9233 - 9709 707 158 aa, chain + ## HITS:1 COG:FN2093 KEGG:ns NR:ns ## COG: FN2093 COG2165 # Protein_GI_number: 19705383 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Fusobacterium nucleatum # 8 158 1 151 151 176 61.0 2e-44 MKNRGFSLIEVIVAVAIIGILSGIVGLKLRSYIATSKDTRAVATLNSFRLAAQLYQIDND KPLIEDSSKYDDDTEIKKALKKLEIYLDNNAKEIIENNEITIGASREKKDSDLIYGGKVK FTFKNPDSNGNSDGYYMWLVPVNPTKNFDSKGKEWIKY >gi|292606608|gb|ADGG01000002.1| GENE 11 9694 - 10176 299 160 aa, chain + ## HITS:1 COG:no KEGG:FN2092 NR:ns ## KEGG: FN2092 # Name: not_defined # Def: integral membrane protein # Organism: F.nucleatum # Pathway: not_defined # 1 155 1 155 165 156 75.0 3e-37 MDKILIIFLYIALIFVMYIDINKKYIPNVLNFSILILSVFIRGISEIENFFIGAACYVLP ILIFYGYVSDILKREVFGFGDIKLIIALGGLLYHSEINIFLQIYIFYLLVFSIATLYITF YLCVYFCKNRALKIRGVEIAFAPYICIAFFIIYNYIEGIL >gi|292606608|gb|ADGG01000002.1| GENE 12 10173 - 10586 289 137 aa, chain + ## HITS:1 COG:no KEGG:FN2091 NR:ns ## KEGG: FN2091 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 137 1 128 128 134 60.0 1e-30 MKKSRAFSLMEVIVSVFILFLVLIPSIKLNSQQLKTYSKIRAKEKELHFFNSLGNYIKSK SISNSHLEFNSYSEFLNSFSDFQTYARNIQNDEFNLTIDVEDIEVDFSDRKERVSLINLE YKGASKTYKNKIIKFKD >gi|292606608|gb|ADGG01000002.1| GENE 13 10593 - 11135 312 180 aa, chain + ## HITS:1 COG:no KEGG:FN2090 NR:ns ## KEGG: FN2090 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 180 7 189 189 223 69.0 2e-57 MNKNKAFSLVEIIIAISLTLIVGSICLITFYSMNKSFLVMNKTYKRDKEIASFRDLLISH IKWNEGVEIRISNLSKNQNINSLGNLFLKESEKEGNLLVLKIQAYNEIEKTTSRYYRCFL FYEDKVSISYFDEGDIVNLFNGTVILENCSGKFNFNNNILKFYLKDKEKEYEEILYYDQK >gi|292606608|gb|ADGG01000002.1| GENE 14 11104 - 11625 246 173 aa, chain + ## HITS:1 COG:no KEGG:FN2089 NR:ns ## KEGG: FN2089 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 173 3 179 179 174 59.0 1e-42 MRKYCTTIKNKAYIFLEVIIISFLFISLTLFVQILLNNSFKLYKVDYETQENFQNLDFLN EIMKVEIRYIEKNINDGNIKNAVDYIVLNEAGEKIFLIADPSKKISLGGYSLLKDEIKIN TFNSVNIHFKKKIIIKDKNYLIFATVKYEVGSSRDLKSLYNGVLTRMWIKEDV >gi|292606608|gb|ADGG01000002.1| GENE 15 11618 - 12796 815 392 aa, chain + ## HITS:1 COG:no KEGG:FN2088 NR:ns ## KEGG: FN2088 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 387 1 388 389 432 69.0 1e-119 MSKKTLALSHIDNYINGGKNTILLLENKFFYIFKVQIENVLNEEDRKEKLEDRLEIVFPR YNSDDFVLRYEILKKDKKRENIVVYLMDINYLNDCIIDDMKDYGFISIIPSFFISREKKD LNHYFNFDISETMLVITEYMNNNILDIQSFKLSKSSLDSEDFEVEDKFSIINTFLANITE DIHIVFTGDKINFEDLELENKTYSFYSVENLDFSKYPNFLPEDLRNKYSLYYIENKYLYI LLGLSIITIILTIIIHYNLNSSEKKLEALELESTKLEEEIENARNEMEEIEVESKNLQEF LVKKEDMDIKISSFLEELTYLCPEYLKISSIEYDENKIFNIEGKTDKVERITKFLENITN SKNFILSNYDYILKKANEIEFKIEVKYRAVPR >gi|292606608|gb|ADGG01000002.1| GENE 16 12801 - 13538 618 245 aa, chain + ## HITS:1 COG:no KEGG:FN2087 NR:ns ## KEGG: FN2087 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 41 229 1 188 226 170 64.0 3e-41 MFKDLKIKNLKIIILLVCYLIVFYFLIFKNILKLVEIKELIEQEDIKIGRLNYEKNTVLK ALALKKEDFEKEQKKIVKNEEDETKKSFDNIPSLFKYIEDKITKNNINFQNFGRSRREED KLNLTMTFKGKEKDVKNFFSDIENEDYDINFSSSYLKITVDKNLLEVKSNLVATVLDKKE EVEIDTNMGDKNIFQSLNLNPKEKEDEENSYSYMRIGDKTYYRVSAKKENKKKNKKTKTK DKGED >gi|292606608|gb|ADGG01000002.1| GENE 17 13538 - 15082 1855 514 aa, chain + ## HITS:1 COG:FN2086 KEGG:ns NR:ns ## COG: FN2086 COG1450 # Protein_GI_number: 19705376 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Fusobacterium nucleatum # 114 514 1 401 402 604 84.0 1e-172 MKKFTLILFLILNNFLFSIGLNRDVDIIDMPLHEVLAILSKECGRNLICSKEAKDIVVDT YFNKGEDLDSVLGFLAETYGLTMKKENNTTIFMLASEKNSKKAKIIGRVTSNNMSLEGAR IELKDLNKFVYSDKSGNFIIDNLDKDVYVCKISKKGYEEKGEIIDSSKSISILNVDLKEK ADNYTNRQNEANLEDLNFYEVDGKFYYTKTFSLFNVSPDEVLKVLRETFGENIKVSSLSK VNKLVVSAERDILENAISIIEDIDKNPKQVKISSQILDISNNLFEELGFDWVYRQNIASE ERNTLTAIILGKAGLNGVGSTLNIVRQFNNKSDVLSTGLNLLESTNDLVVSSVPTLMIAS GEEGEFKVTEEVIVGVKTTRENKNDRHTEPVFKEAGLIMKVKPFIKDDDYIVLEISLELS DFKFKRNVLNIKDVNSGTYNSEGGSKVGRALTTKVRVKNGDTILIGGLKKSIQQNIESKI PILGDIPIISFFFKNTTKKRENSDMYIKLKVEIE >gi|292606608|gb|ADGG01000002.1| GENE 18 15439 - 15960 835 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237738588|ref|ZP_04569069.1| ## NR: gi|237738588|ref|ZP_04569069.1| predicted protein [Fusobacterium sp. 2_1_31] # 19 173 19 177 177 124 91.0 3e-27 MKKKLFGVLLFSLILSSLAYAKIRDAGNQEAAQNVAETSIVKLSPEEEKEAFKALERARK RIEKEDKEREEALKLAEKQAQEEAKRIEEAQAEAEEQQKQVQQVQETIVQENGNTVTEVV TTTSGLTPKEEKEAFKALERARKRIEKEDKERAEALKLAEEQAKAQAAQTAQE >gi|292606608|gb|ADGG01000002.1| GENE 19 16052 - 17398 1715 448 aa, chain - ## HITS:1 COG:FN2054 KEGG:ns NR:ns ## COG: FN2054 COG0166 # Protein_GI_number: 19705344 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Fusobacterium nucleatum # 1 448 1 448 448 791 90.0 0 MKKISLDYSKISKFVSENELNELKNKVELVSEKLHNKTGAGNDFLGWLDLPVNYDKEEFA RIKKASEKIKSDSEVLVVIGIGGSYLGARAVIECLSHSFFNSLSKEKRNAPEIYFAGQNI SGTYLKDLIEIIGDRDFSVNVISKSGTTTEPAIAFRVFKELLENKYGEAAKERIYVTTDK NKGALKKLADEKGYEEFVIPDDVGGRFSVLTAVGLLPIAVAGISIDDLMAGAQTAREDYS KDFTSNDCYKYAAIRNILYKKDYNIEILANYEPKLHYISEWWKQLYGESEGKDKKGIFPA SVDLTTDLHSMGQYIQDGRRNLMETILNVENPLKDISIKKEAEDLDGLNYLEGKGLSFVN NKAFEGTLLAHIDGGVPNLIINIPELNPFNIGYLIYFFEKACAISGYLLEVNPFDQPGVE SYKKNMFALLGKKGYEELSKELNERLKK >gi|292606608|gb|ADGG01000002.1| GENE 20 17696 - 18151 726 151 aa, chain - ## HITS:1 COG:FN0338 KEGG:ns NR:ns ## COG: FN0338 COG3086 # Protein_GI_number: 19703681 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Fusobacterium nucleatum # 37 150 1 114 114 196 87.0 1e-50 MVNKGIVTKIQGDTVAIKLYKSSSCSHCSCCSESNKMGSDFEFKINQKVELGDLVTLEIS EKDVVKAAMIAYVFPPIMMILGYIVADRLGFSEMQSIAGSFIGLVIGFIFLAIYDRFFAK KTIDEEIKIVSVEKYDPNACENLAERCEDFF >gi|292606608|gb|ADGG01000002.1| GENE 21 18352 - 18846 673 164 aa, chain + ## HITS:1 COG:no KEGG:FN0018 NR:ns ## KEGG: FN0018 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 6 163 1 155 156 69 30.0 4e-11 MKKLFLIFLSLFCISCTGLTAFTQHTANPDDVQKLMAKGALELMTPQERKDYEAGKTVNM IGFQSASRGVVLDKLTSMANLSKGKIDEDVVTAIAMMEKYPGTIFVSDNNDVFVRTIMYL GQSEEGRKLLKGSRFLFINNFNESKVRELAQKYNFKYSFPKLDN >gi|292606608|gb|ADGG01000002.1| GENE 22 18901 - 20154 1375 417 aa, chain - ## HITS:1 COG:FN0017 KEGG:ns NR:ns ## COG: FN0017 COG3177 # Protein_GI_number: 19703369 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 417 1 415 415 565 85.0 1e-161 MSNKYEKLIKLYYKKKNIEEEYIKRRENSSTFITDLKINPIKRGNKIFEKEYNLFYVNLL EHTLLQEKIMENSKKIISLSNPNKFPPIAIKEIINKILSNELYKTNKIEGIESSKSQIYS SLKENGKLNKKENKLDGIIKKYRDIMEKNFKDTQHIESLSSFRKIYDEMFEDFEKSGNYK LDGKYFRKDTVKVINGLGKTIHIGINGEETIEKNIENLIQFMNRKDIPFLVKASISHFFF EYIHPFYDGNGRFGRYLLSLYLARKLDILTAFSVSYSISRNLDDYYKSFVEVEDVTNYGE ITFFVENILKTIKNGQEMIIELLNDSVMKFNHSIEILNELTKDLSEKENIILQIYLQNYL FNDFEELTNIELSTIIGDLTQQTINKYTQELEKKGYLVKIKQRPLTYALSEKITEKM >gi|292606608|gb|ADGG01000002.1| GENE 23 20251 - 21246 969 331 aa, chain - ## HITS:1 COG:all5295 KEGG:ns NR:ns ## COG: all5295 COG0451 # Protein_GI_number: 17232787 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Nostoc sp. PCC 7120 # 3 324 4 326 334 122 30.0 1e-27 MKKIFIVTGSTGFLGNTIVKKLSKNKDYEVRALVYSKKEEDILKDIECKIFHGDITNKAS LKDIFTVEDNKDIYVIHCAAIVTIKSDEDPKVYDVNVNGTNNVIDYCLEVNAKLLYVSSV HAIKESEGKIFETKEFDKDSVHGYYAKTKAEAAKNVLEAVKNRNLKACVFHPAGIIGPGD SSNTHTTQLVKRMLENKLVFVVNGGYNFVDVRDVADGIINAADMGEVGETYILSGEYISI KDYAKLVEKILGKKKYIFSIPIWFVKMIAPAMEKYYDLVKKVPLFTRYSIYTLQTNSNFS NDKAHKELNFRNRKIEDSIKDTIIDITEKEI >gi|292606608|gb|ADGG01000002.1| GENE 24 21496 - 21978 562 160 aa, chain + ## HITS:1 COG:no KEGG:FN0015 NR:ns ## KEGG: FN0015 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 159 1 181 182 175 60.0 5e-43 MGMDLCYYGVKEENIPDILDGNFFEEDFSDSEPQHTLRVFSVKELYYVYSGRKELEEEDF QGKNERDLFIEAFLGEVTVSSPPKDIYSYCTCKEKVKEIANFLNKIDIKDCFEKIEKFYS SSEEEDYIFDIENIIDRFNDFKEFYNELVKNDLGVFIYIS Prediction of potential genes in microbial genomes Time: Thu May 19 21:15:12 2011 Seq name: gi|292606607|gb|ADGG01000003.1| Fusobacterium sp. 1_1_41FAA cont1.3, whole genome shotgun sequence Length of sequence - 26036 bp Number of predicted genes - 27, with homology - 26 Number of transcription units - 6, operones - 4 average op.length - 6.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 219 179 ## CLD_A0161 putative IS transposase 2 1 Op 2 2/0.000 - CDS 232 - 387 85 ## COG1943 Transposase and inactivated derivatives 3 1 Op 3 . - CDS 384 - 632 329 ## COG1943 Transposase and inactivated derivatives - Prom 654 - 713 12.5 + Prom 602 - 661 13.0 4 2 Tu 1 . + CDS 861 - 1364 859 ## HMPREF0868_0528 hypothetical protein + Term 1385 - 1426 2.6 - Term 1332 - 1389 1.6 5 3 Op 1 1/0.000 - CDS 1412 - 1921 640 ## COG1827 Predicted small molecule binding protein (contains 3H domain) 6 3 Op 2 13/0.000 - CDS 1914 - 2774 500 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 7 3 Op 3 10/0.000 - CDS 2752 - 4044 1472 ## COG0029 Aspartate oxidase 8 3 Op 4 . - CDS 4046 - 4942 1214 ## COG0379 Quinolinate synthase - Prom 4962 - 5021 3.3 - Term 5393 - 5455 -0.9 9 4 Op 1 . - CDS 5471 - 6082 879 ## COG1279 Lysine efflux permease 10 4 Op 2 11/0.000 - CDS 6098 - 7981 2775 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division - Prom 8044 - 8103 9.4 11 4 Op 3 4/0.000 - CDS 8205 - 9572 1671 ## COG0486 Predicted GTPase 12 4 Op 4 16/0.000 - CDS 9591 - 10361 1115 ## COG1847 Predicted RNA-binding protein 13 4 Op 5 18/0.000 - CDS 10363 - 10983 637 ## COG0706 Preprotein translocase subunit YidC 14 4 Op 6 16/0.000 - CDS 10980 - 11228 217 ## COG0759 Uncharacterized conserved protein 15 4 Op 7 . - CDS 11237 - 11572 304 ## COG0594 RNase P protein component - Term 11592 - 11624 2.1 16 4 Op 8 . - CDS 11627 - 11761 224 ## PROTEIN SUPPORTED gi|197735492|ref|YP_002164270.1| hypothetical protein FNP_0004 - Prom 11925 - 11984 11.5 17 5 Tu 1 . - CDS 12144 - 12347 73 ## + Prom 12259 - 12318 15.2 18 6 Op 1 . + CDS 12391 - 14286 1709 ## FN0001 chromosomal replication initiator protein DnaA 19 6 Op 2 9/0.000 + CDS 14336 - 14551 329 ## COG2501 Uncharacterized conserved protein 20 6 Op 3 . + CDS 14565 - 15674 530 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 21 6 Op 4 . + CDS 15652 - 15927 356 ## FN2127 hypothetical protein 22 6 Op 5 24/0.000 + CDS 15962 - 17869 2738 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 18002 - 18061 8.4 23 6 Op 6 1/0.000 + CDS 18095 - 20533 3311 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 24 6 Op 7 1/0.000 + CDS 20547 - 21014 420 ## COG0622 Predicted phosphoesterase + Term 21041 - 21079 -0.9 25 6 Op 8 40/0.000 + CDS 21095 - 22111 1401 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit + Term 22207 - 22259 -0.2 + Prom 22129 - 22188 7.0 26 6 Op 9 3/0.000 + CDS 22360 - 24759 3412 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 27 6 Op 10 . + CDS 24768 - 25487 1031 ## COG2849 Uncharacterized protein conserved in bacteria + Term 25530 - 25597 1.1 + 5S_RRNA 25858 - 25913 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|292606607|gb|ADGG01000003.1| GENE 1 3 - 219 179 72 aa, chain - ## HITS:1 COG:no KEGG:CLD_A0161 NR:ns ## KEGG: CLD_A0161 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_B1 # Pathway: not_defined # 1 62 1 62 480 67 62.0 2e-10 MANYVLTLALKTELWQEHILEKRLNIARMIYNSCLSEILKRHRKMINSSEYKGISNLDKK EQSKRYKELDKK >gi|292606607|gb|ADGG01000003.1| GENE 2 232 - 387 85 51 aa, chain - ## HITS:1 COG:asl7246 KEGG:ns NR:ns ## COG: asl7246 COG1943 # Protein_GI_number: 17233262 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 4 48 21 65 70 63 66.0 6e-11 MNFSKKTFLKHPEIKNKLWNGHLWNPSYFVATVSKNTEEQIKRYIQTQKER >gi|292606607|gb|ADGG01000003.1| GENE 3 384 - 632 329 82 aa, chain - ## HITS:1 COG:DR0177 KEGG:ns NR:ns ## COG: DR0177 COG1943 # Protein_GI_number: 15805213 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 7 82 4 79 131 80 40.0 6e-16 MSNINFGRGYVYSIQYHIVWYVKYRRKALSDDIEKTLKELLIEISNENNIKIVEMETDLD HIHILIECSPQHFIPNILKIFK >gi|292606607|gb|ADGG01000003.1| GENE 4 861 - 1364 859 167 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0528 NR:ns ## KEGG: HMPREF0868_0528 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 166 1 162 163 119 47.0 5e-26 MGMYAMYQEVKKEDFKKLLESDDFFETIEDLEEKDGTELCDIDKMWDALHFLLNGLSAIH GTPEDNILSEFIIGSESFDEESEDFTRYIPTERVIEIAKKLNEINFEDYLKDFDMNKFAE NGIYPDIWSYDEEREEIIEELSEHFETLKEFYNKVAKNKNIVVVTIC >gi|292606607|gb|ADGG01000003.1| GENE 5 1412 - 1921 640 169 aa, chain - ## HITS:1 COG:FN0011 KEGG:ns NR:ns ## COG: FN0011 COG1827 # Protein_GI_number: 19703363 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Fusobacterium nucleatum # 1 169 1 169 169 248 97.0 4e-66 MIEREEREKKILEILRDSETLVSGTYLAEFFDVSRQVIVQDIAILKAKNIDIISTNRGYR LLSKGIKKVIKVKHDDAEIRNELNAIVDLGASVEDVFVIHKTYGEIRVKLDIKSRRDVDL LVENINSKLSKPLKNLTDNCHYHTIIAENENIFKEVEDKLKELGILMEE >gi|292606607|gb|ADGG01000003.1| GENE 6 1914 - 2774 500 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 18 279 18 283 286 197 40 8e-50 MNLRKIDKFQMNESIRLALKEDITSEDISTNAIYKNSRLAEISLYSKEEGILAGIDVFKR VFELLDDNVEFIEYKADGDKLLNKDLILKIKADVKTILSAERTALNYLQRMSGIATYTQK MVETLDDENIKLLDTRKTTPNMRIFEKYSVRVGGGYNHRYNLSDAIMLKDNHIDAAGSIT EAIKLAREYSPFIKKIEIEVEDLKGVEEAVKAGADIIMLDNMDIETTKEAIKIINKKAII ECSGNVDINNINRFKGLEIDYISSGAITHSAKILDLSLKNLRYVDD >gi|292606607|gb|ADGG01000003.1| GENE 7 2752 - 4044 1472 430 aa, chain - ## HITS:1 COG:FN0009 KEGG:ns NR:ns ## COG: FN0009 COG0029 # Protein_GI_number: 19703361 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Fusobacterium nucleatum # 1 430 1 430 435 729 90.0 0 MKIENSDVVIVGSGVAGLICALTLSKKFKIILLTKKKLQDSNSYLAQGGISVCRGKEDRE EYIEDTLIAGHYKNDKRAVEILVDESEEAVNTLIENGVKFTGDKKGLFYTREGGHRKFRI LYCEDQTGKYIMESLIEKILERDNIKIIEDCEFLDIIEKENTCLGILAKKEEIFAIKSKF TVLATGGLGGIYKNTTNFSHIKGDGVAVAIRHNIELKDISYIQIHPTTLYSKENKRKFLI SESVRGEGAILLNQKLERFTDELKPRDKVTKAILEEMKKDKSEYEWLDFSTIKLDVKERF PNIYRNLMENNIDPLKDKVPVVPAQHYTMGGIKVDMDSKTLMKNLYAIGEVACTGVHGKN RLASNSLLESVVFGKRAAYSIIDENNISVYNEITDDIFENIADKIILTDEKENKNIIEKR IKEDEFEKNR >gi|292606607|gb|ADGG01000003.1| GENE 8 4046 - 4942 1214 298 aa, chain - ## HITS:1 COG:FN0008 KEGG:ns NR:ns ## COG: FN0008 COG0379 # Protein_GI_number: 19703360 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Fusobacterium nucleatum # 1 298 1 298 298 516 94.0 1e-146 MKDRIKKLQKEKDVAILAHYYVDGEVQKIADYVGDSFYLAKTATKLKNKTIIMAGVYFMG ESIKILNPEKTVHMVDIYADCPMAHMITIKKIKEMREKYDDLAVVCYINSTAEIKAYCDV CITSSNAVKIVSKLKEKNIFIVPDGNLAAYIAKQIKNKNIILNEGYCCVHNLVHLENVIK LKKEYPNAKVLAHPECKEEILNLADYIGSTSGIIEEALKDGDEFIVVTERGIQYKIYEKA PNKKLYFADTLICKSMKKNTLEKIENILLNGGDELEVDDEIAKKALIPLERMLELAGD >gi|292606607|gb|ADGG01000003.1| GENE 9 5471 - 6082 879 203 aa, chain - ## HITS:1 COG:FN1861 KEGG:ns NR:ns ## COG: FN1861 COG1279 # Protein_GI_number: 19705166 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Fusobacterium nucleatum # 1 201 1 202 207 264 76.0 1e-70 MDVYLQGFLMGLAYVAPIGVQNLFVINSAISQKRGRALLIALIVIFFDITLAFACFFGIG LLIDKLEWLKLIILLIGSLIVIYIGQGLIRSKSSFKETNTNISLAKVITTACVVTWFNPQ AIIDGTMMLGAFRVNLVASDATYFILGVVSASFAWFIGVTLFVSFFRDKFNDKVLRIINI VCGAIIIFSGIKLLLSFYKMLKG >gi|292606607|gb|ADGG01000003.1| GENE 10 6098 - 7981 2775 627 aa, chain - ## HITS:1 COG:FN0007 KEGG:ns NR:ns ## COG: FN0007 COG0445 # Protein_GI_number: 19703359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Fusobacterium nucleatum # 1 627 1 627 628 1119 92.0 0 MDKDYDVIVVGAGHAGVEAALASARLGNKVALITLYLDTISMMSCNPSIGGPGKSNLVTE IDVLGGEMGRHIDEFNLQLKDLNTSKGPAARITRGQADKYKYRKKMREKLEKNENISLIQ DCVEEILVEDIKDRQNLSYEKKVIGVKTRLGLIYNTKAIVLATGTFLKGKIVIGDITYSA GRQGETSAEKLSDSLRELGIKIERYQTATPPRLDKKTIDFSQLEELKGEEHPRYFSIFTK KEKNNTVPTWLTYTSEETIEVVRDMMKYSPIVSGMVNTHGPRHCPSIDRKVLNFPEKAKH QIFLEMESENSDEIYVNGLTTAMPAFVQEKILRTIKGLENAKIMRHGYAVEYDYAPASQL YPSLENKKISGLFFSGQINGTSGYEEAAAQGFIAGVNAAKKIKGEEPVIIDRSEAYIGVL IDDLIHKKTPEPYRVLPSRAEYRLTLRYDNAFMRLFDKIKEVGIVDKDRIEFLKNSINNV YTEINNLKNISISMNDANNFLESLGIEEKFVKGVKASEILKIKDVNYDDLKTFLNLNDYE DFVKNQIETMIKYEIFIERENKQIEKFKKLEHMYIDKNINYDDIKGISNIARAGLNEVRP LSIGEATRISGVTSNDITLIIAHMNDK >gi|292606607|gb|ADGG01000003.1| GENE 11 8205 - 9572 1671 455 aa, chain - ## HITS:1 COG:FN0006 KEGG:ns NR:ns ## COG: FN0006 COG0486 # Protein_GI_number: 19703358 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 455 1 455 455 753 95.0 0 MLLDTIAAISTPRGEGGISIVRMSGQDSLNILEKIFRAKNKKVSELKNYSINYGHIIDNE HIVDEVLVSIMKAPNTYTREDIVEINCHGGFLVTEQVLQVVLKNGARIAEIGEFTKRAFL NGRIDLTQAEAVIDVIHGKTEKSLSLSLNQLRGDLRDKIATIKKSVLDLAAHINVVLDYP EEGIDDPVPENLVDNLKKASAEIKDLISSYDKGKIIKDGIKTAIIGKPNVGKSSILNSLL REDRAIVTHIPGTTRDIIEEVININSIPLLLVDTAGIRNTDDIVENIGVEKSKELINSAD LILYVIDTSREIDEEDFRIYEIINTDKVIGILNKIDIKKEIDLSKFSKIDKWIEISALSK IGIDNLEDQIYKYIMNENVEDSSQKLVITNVRHKSALEKTNEALLNIIETIDMGLPMDLM AVDIKDALDSLSEVTGEISSEDLLNHIFSNFCVGK >gi|292606607|gb|ADGG01000003.1| GENE 12 9591 - 10361 1115 256 aa, chain - ## HITS:1 COG:FN0005 KEGG:ns NR:ns ## COG: FN0005 COG1847 # Protein_GI_number: 19703357 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Fusobacterium nucleatum # 98 256 2 162 163 202 84.0 4e-52 MEKTIEIKAIDKEKALKRALNILGVELTDNETVDIVEKVAPRKKFFGLLGTEPGLYEVSI KTKKEEKKEHKEHKPHVHKFEKEKTEKHVKTEKVEKPEKAEKVEKIERVNHSEQEKEISE KVAFFVEKMKLDIKYKIKRVKERVYVVEFFGKDNALIIGQKGKTLNSFEYLLNSMIKNCK IEIDVEKFKEKRNDTLRVLAKRMAEKVSKTGKTVRLNAMPPRERKVIHEVVNKYPDLDTF SEGRDPKRYIVIKKKR >gi|292606607|gb|ADGG01000003.1| GENE 13 10363 - 10983 637 206 aa, chain - ## HITS:1 COG:FN0004 KEGG:ns NR:ns ## COG: FN0004 COG0706 # Protein_GI_number: 19703356 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Fusobacterium nucleatum # 1 206 1 205 205 299 86.0 2e-81 MSYLYNLLKQFLALLLTTTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSTKEMKKLQP EIEKLKEKYANDKQMLNIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGIIPAD SSFLWLKLPEPDPFFILPVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFISYRMP SGLQLYWLTSSVLAVVQQYFIMKKGA >gi|292606607|gb|ADGG01000003.1| GENE 14 10980 - 11228 217 82 aa, chain - ## HITS:1 COG:FN0003 KEGG:ns NR:ns ## COG: FN0003 COG0759 # Protein_GI_number: 19703355 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 82 1 82 82 133 81.0 9e-32 MKKIFILLIRFYQKFISPLFPAKCRYYPTCSQYTLEAIQEYGAIKGTYLGIKRILRCHPF HEGGYDPVPKRKREDSEEKEKE >gi|292606607|gb|ADGG01000003.1| GENE 15 11237 - 11572 304 111 aa, chain - ## HITS:1 COG:FN0002 KEGG:ns NR:ns ## COG: FN0002 COG0594 # Protein_GI_number: 19703354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Fusobacterium nucleatum # 1 111 1 111 111 149 88.0 1e-36 MNTLKKNGEFQNIYKLGNKYFGNYSLIFFNKNKLDYSRFGFVASKKIGKAFCRNRIKRLF REYIRLNIEKLNANYDIIIVAKKKAGEIIETIKYQDIEKDLNRIFKNSKII >gi|292606607|gb|ADGG01000003.1| GENE 16 11627 - 11761 224 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197735492|ref|YP_002164270.1| hypothetical protein FNP_0004 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 44 1 44 44 90 100 8e-18 MKRTFQPNQRKRKKDHGFRARMSTKNGRKVLKRRRVRGRAKLSA >gi|292606607|gb|ADGG01000003.1| GENE 17 12144 - 12347 73 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYIIKNKKYHKKILTYFLYIFNNKIFNFSLSNFVRFKILYINITLKINIIIICIHIIIIC FNLKSSL >gi|292606607|gb|ADGG01000003.1| GENE 18 12391 - 14286 1709 631 aa, chain + ## HITS:1 COG:no KEGG:FN0001 NR:ns ## KEGG: FN0001 # Name: not_defined # Def: chromosomal replication initiator protein DnaA # Organism: F.nucleatum # Pathway: not_defined # 1 631 1 637 637 845 85.0 0 MKKEKVEQEEKKEVVEVIETENFEVSKTGSLADDLMKFENVKDIKIENKEVPDIEVQEIY IRETGNYLNLQENFINIPIEMIYFPFFTPQKQNKRINFKYTFEDLGVTMYSTLIPKDKKD KVFQPSIFEEKIYTFLISMYQEKSLQQDENEEVAIEFEISDFIVNFLGNKMNRTYYSKVE QALKNLKNTIYQFEISNHTKFGKNKFEDSSFQLLNYQKMKVGKKIFYRVVLNKNIVNKIK SKRYIKYNTKNLLEIMVKDPIASRIYKYISKIRYKNNKGEINVRTLAAIIPLKMEQRVEK IIKNGVKEYYLNRMKPVLTRILKAFDVLLELKYIVSFEEIYNKDEKTYYIAYVFNKERDG DCHMSEFIKKNEKNIVKENIDGVEEVIDLNADIDYQDNIEYLINKAKENPKISPKWNAWV DKKIKKILAEDGEEMLKRVLNILIHMDKNIEIGLPNYISGILKNIGGKGSKKANNINMTI FENVSKGKGLKSKNQIKQARKKGMEKISNIKEIMIENNFLEDKLEDKTSLLEKKAEVKNE KLDNVDEKIYNIEESNLEKTLSFFDEETRNTIEEKALENIKKEIDNSNIDVILNVKKFSK TMYYKMIGASIMKILKSEYSEVLENINKNDK >gi|292606607|gb|ADGG01000003.1| GENE 19 14336 - 14551 329 71 aa, chain + ## HITS:1 COG:FN2129 KEGG:ns NR:ns ## COG: FN2129 COG2501 # Protein_GI_number: 19705419 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 71 1 71 71 107 92.0 4e-24 MKNIEKVKISTEFIKLDQFLKWLAVVDSGSEAKEIILDGKVKVNDEVETRRGRKIYPEYK VEIFDKTYIVE >gi|292606607|gb|ADGG01000003.1| GENE 20 14565 - 15674 530 369 aa, chain + ## HITS:1 COG:FN2128 KEGG:ns NR:ns ## COG: FN2128 COG1195 # Protein_GI_number: 19705418 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Fusobacterium nucleatum # 1 369 1 369 369 552 93.0 1e-157 MKISNISYLNFRNLENTSIELSDKINVFYGKNAQGKTSLLEAIYYSSTGISFKTKKTTEM IKYNFDEFISSISYSDYIANNKISVRFKNIPGAKKEFFFNKKRISQTDFYGKINIIAYIP EDIILINGSPKNRRDFFDIEISQIDKEYLSNLKNYDKLLKIRNKYLKENKRNTEEFAVYE KEFIKYASYIIFTRLEYVKSLSIILNLQYRKLFNIEQELNLKYETNLDKTGKVTVEMIQE SLQKEILQKKHQEDRYKFSLVGPHKDDYKFLLNGYEAKISASQGEKKSIIFSLKLSEIEI IKKNRKENPVVIIDDITSYFDEDRRKSILEFFNKRDIQVLISSTDKLDIEAKNFYVEKGI IEDENNVNK >gi|292606607|gb|ADGG01000003.1| GENE 21 15652 - 15927 356 91 aa, chain + ## HITS:1 COG:no KEGG:FN2127 NR:ns ## KEGG: FN2127 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 90 1 90 90 88 65.0 7e-17 MKIMSISDMAISAIENEDKIKLMILREKWKELFSDLAEISTVIDFNEKIIYIKSYDSVLK HYIFANKQKLINEIMESLEIKFEIEDIKIKS >gi|292606607|gb|ADGG01000003.1| GENE 22 15962 - 17869 2738 635 aa, chain + ## HITS:1 COG:FN2126 KEGG:ns NR:ns ## COG: FN2126 COG0187 # Protein_GI_number: 19705416 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Fusobacterium nucleatum # 1 635 5 639 639 1175 94.0 0 MSYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCNKIDVKI LPDNIIEVVDNGRGIPTDIHPKYGKSALEIVLTVLHAGGKFENDNYKVSGGLHGVGVSVV NALSEWLEVEVRKEGNVYYQKYHRGKPEEDVKIIGSCEANEHGTTVRFKADGDIFETLVY NYFTLSNRLKELAYLNRGLTITLSDLRKEEKKEETYKFNGGILDFLNEIVKEEATIIDKP FYVSAEQDNVGVDVTFTYTTSQNETIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQ GLLKDKDGKLMGNDIREGVVAIVSTKIPQPQFEGQTKGKLGNSEVSGIVNSIVSSSLKIF LEDNPAITKIVVEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEI FIVEGNSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSIGD TFDISKLRYGKIILMTDADVDGAHIRTLILTFLYRYMRELINEGNIYIACPPLYKVSSGK QIIYAYNDLELKNVLAQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSVDN AREADMLFDKLMGDKVEPRREFIEEHAEYVKNIDI >gi|292606607|gb|ADGG01000003.1| GENE 23 18095 - 20533 3311 812 aa, chain + ## HITS:1 COG:FN2125 KEGG:ns NR:ns ## COG: FN2125 COG0188 # Protein_GI_number: 19705415 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Fusobacterium nucleatum # 1 812 1 811 811 1390 95.0 0 MSNVDNRYIEEELKESYLDYSMSVIVSRALPDVRDGLKPVHRRILFAMNEMGMTNDKPFK KSARIVGEVLGKYHPHGDSAVYGTMVRMAQDFNYRYLLVEGHGNFGSIDGDSAAAMRYTE ARMEKITAELLEDIDKDTIDWRKNFDDSLDEPTVLPAKLPNLLLNGAIGIAVGMATNIPP HNLGELVDGILALIDNKDIEILELMNYIKGPDFPTGAIIDGRAGIIEAYKTGRGKIKVRG KVDIEEQKNGKANIIVSEIPYQLNKANLIEKIANLVKEKKITEISDLRDESNREGIRIVI EVKKGEEPELVLNKLYKFTDLQNTFGVIMLSLVNNVPRVLNLKEMLNEYIKHRFDVITRR TAFDLDKAEKRAHILKGYQIALENIDRIIELIRASSDGTVAREQLIEKYGFTDIQARSIL DMKLQRLTGLEREKIDNEYKEIEALIKELREVLADNSKIYEIMKKELLEIKEKYNDKRRT QIEEERMEILPEDLIKDEEIIITYTNKGYVKRIEASKYKAQRRGGRGVSALNTIEDDYAE KIISASTLDTMMIFTDKGKVYNIRAYEIPDLSKQSRGRLLSNIINLSEGEKVSDTIVIKE FLPEKEIVFITKNGLIKKTSLGEFKNINNSGLIAIKIKEDDDIIFVGLIEDVTKEEILIA THDGYCTRFLTDTIRPTGRSTQGVKAITLREGDAVVSAMLIKNPETDILTITENGYGKRT SLDEYPQYNRGGKGVINLKASEKTGKVVSVLEVTEDEELMCITSNGIVIRTSISEISRIG RATQGVRIMKVADEEKVAAITKIKKEEEELED >gi|292606607|gb|ADGG01000003.1| GENE 24 20547 - 21014 420 155 aa, chain + ## HITS:1 COG:FN2124 KEGG:ns NR:ns ## COG: FN2124 COG0622 # Protein_GI_number: 19705414 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Fusobacterium nucleatum # 1 153 1 153 153 235 77.0 3e-62 MKRILVLSDSHSYFDKALKIFEKEKPDIVIAAGDGIGDIDDLSYVHPEATYYMVKGNCDF FERSHSEENIFEIEGKKFFLTHGHLYDVKRSLNSIKEMTKKLKANLVIFGHTHKPYIEYY EDEILFNPGATEDGRYGLIILKDGNIQLFHKQLKL >gi|292606607|gb|ADGG01000003.1| GENE 25 21095 - 22111 1401 338 aa, chain + ## HITS:1 COG:FN2123 KEGG:ns NR:ns ## COG: FN2123 COG0016 # Protein_GI_number: 19705413 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Fusobacterium nucleatum # 1 338 1 338 338 660 96.0 0 MKEEILKVKEEIQKHIEESKTLQKLEEIRVNYMGKKGIFTDLSKKMKDLTAEERPKIGQI INEVKEKISNLLDEKNKALKEKELNERLESEIIDISLPGTKYNYGTIHPINETMELMKNI FSKMGFDIVDGPEIETVEYNFDALNIPKTHPSRDLTDTFYLNDSIVLRTQTSPVQIRYML EHGTPFRMICPGKVYRPDYDISHTPMFHQMEGLVVGKDISFADLKGILTHFVKEVFGDRK VRFRPHFFPFTEPSAEMDVECMICHGEGCRLCKDSGWIEIMGCGMVDPEVLKYVGLNPDE VNGFAFGVGIERVTMLRHGIGDLRAFFENDMRFLKQFK >gi|292606607|gb|ADGG01000003.1| GENE 26 22360 - 24759 3412 799 aa, chain + ## HITS:1 COG:FN2122_2 KEGG:ns NR:ns ## COG: FN2122_2 COG0072 # Protein_GI_number: 19705412 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Fusobacterium nucleatum # 146 799 1 653 653 1102 88.0 0 MLISLNWLKQYVDIKESVEEIANALTMIGQEVEAIDIQGKDLGNVVIGQIVEFDKHPNSD RLTLLKVNVGEEAPLQIICGATNHKLNDKVVVAKIGAVLPGNFKIKKSKIRDVESFGMLC SDAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREVA AYYNRKVKYPVIEMAETIESVNTVIKVNIEDKDRCKRYIGRVIKNVKIKESPEWLKARIR AMGLNPINNVVDITNFVMFEYNQPMHAFDLDKVEGNITIRAAKENEEITTLDGVERVLKN GELVIADDEKAIAIGGVIGGQNTQIDSDTKNIFVEVAYFTPENIRKESRDLGIFTDSAYR NERGMDIENLAVVMNRAVSLLAEVAEGEVLSEVIDKYVEKPKRAEISLNLEKLNKFIGKT LTYEEVGKILTHLDIELKPLGDGTMLLIPPSYRADLTRPADIYEEVIRMYGFENIEAKMP VMSIESGEENTNFKISRIVREILKELGLNEVINYSFIPKFTKELFNFGEEVIEIKNPLSE DMAVMRPTLLYSLIANVRDNINRNQTDLKLFEISKTFKKLGEGQNGLAIEDLKIALILSG REEKNLWNQSKSDYNFYDLKGYLEFLLERLNVTKYSLTRLTNNKNFHPGASAEIKIGEDV IGVLGELHPNLVNYFGIKREKVFFAELNLTSLLKYIKIKVNYETISKYPEVLRDLAITLD RAVLVGEMVKEIKKKVNLIEKIDIFDVYSGDKIDKDKKSVAMSIVLRDKNRTLTDEDIDK AMTAILELIKDKYNGEIRK >gi|292606607|gb|ADGG01000003.1| GENE 27 24768 - 25487 1031 239 aa, chain + ## HITS:1 COG:FN2121 KEGG:ns NR:ns ## COG: FN2121 COG2849 # Protein_GI_number: 19705411 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 20 239 9 230 230 244 59.0 7e-65 MKKILASLFILLSITAFSVEKVAAERIEVKEEKVYLKGQQTPFTGVVEKKYANGRVEATL DIVDGKLNGKTYIYYENGIVKKEESYINGLMEGVERAYYPNGKLEFEVTNKNDLRNGIER HYSEEGKLIIEVPYQNNVVTGLVKQYTKDGKLEYETNYVNNKREGLSKKYYPSGRLLSQV TFKNDKEEGLMKGYSEEGKLEIEIPYLHGSVEGLVKRYDENGKVVEQAMYKNNQEVKSK Prediction of potential genes in microbial genomes Time: Thu May 19 21:15:53 2011 Seq name: gi|292606606|gb|ADGG01000004.1| Fusobacterium sp. 1_1_41FAA cont1.4, whole genome shotgun sequence Length of sequence - 54532 bp Number of predicted genes - 46, with homology - 43 Number of transcription units - 24, operones - 12 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 114 - 169 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 1 1 Op 1 . - CDS 434 - 1822 1713 ## COG0006 Xaa-Pro aminopeptidase - Prom 1845 - 1904 7.1 2 1 Op 2 . - CDS 1915 - 2442 791 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 2467 - 2526 9.4 - Term 2477 - 2506 1.4 3 2 Tu 1 . - CDS 2530 - 2910 767 ## FN1792 hypothetical protein - Prom 2934 - 2993 7.2 4 3 Op 1 25/0.000 - CDS 3146 - 4873 2733 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) - Term 4891 - 4927 4.8 5 3 Op 2 . - CDS 4942 - 5205 381 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 5298 - 5357 10.1 + Prom 5297 - 5356 11.5 6 4 Tu 1 . + CDS 5426 - 5671 473 ## FN1796 hypothetical protein + Prom 5676 - 5735 13.5 7 5 Op 1 26/0.000 + CDS 5779 - 6204 528 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 8 5 Op 2 . + CDS 6222 - 7106 1171 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 7127 - 7188 18.0 + Prom 7136 - 7195 11.7 9 6 Op 1 4/0.000 + CDS 7244 - 8410 1768 ## COG0153 Galactokinase + Term 8466 - 8498 -0.1 + Prom 8468 - 8527 4.8 10 6 Op 2 4/0.000 + CDS 8558 - 10090 1995 ## COG4468 Galactose-1-phosphate uridyltransferase 11 6 Op 3 . + CDS 10090 - 11079 1577 ## COG1087 UDP-glucose 4-epimerase + Term 11084 - 11116 4.2 - Term 11075 - 11101 0.3 12 7 Op 1 1/0.500 - CDS 11102 - 11908 1069 ## COG2849 Uncharacterized protein conserved in bacteria 13 7 Op 2 1/0.500 - CDS 11929 - 13086 1539 ## COG2849 Uncharacterized protein conserved in bacteria 14 7 Op 3 1/0.500 - CDS 13123 - 13860 957 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 13971 - 14030 9.1 - Term 14019 - 14046 0.1 15 8 Op 1 1/0.500 - CDS 14047 - 14553 815 ## COG2849 Uncharacterized protein conserved in bacteria 16 8 Op 2 . - CDS 14574 - 15305 869 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 15347 - 15406 13.8 - Term 15394 - 15434 4.4 17 9 Op 1 . - CDS 15447 - 17048 2129 ## FN1554 hypothetical protein 18 9 Op 2 . - CDS 17002 - 22863 7724 ## FN1554 hypothetical protein - Prom 23024 - 23083 11.7 - Term 23077 - 23125 4.4 19 10 Tu 1 . - CDS 23140 - 30402 9514 ## FN1554 hypothetical protein - Prom 30433 - 30492 10.8 - Term 30497 - 30550 13.5 20 11 Tu 1 . - CDS 30572 - 31813 1663 ## COG0786 Na+/glutamate symporter - Prom 31928 - 31987 12.4 - Term 31935 - 31968 4.0 21 12 Op 1 30/0.000 - CDS 31992 - 33176 1542 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 33198 - 33257 6.6 22 12 Op 2 51/0.000 - CDS 33260 - 35341 3001 ## COG0480 Translation elongation factors (GTPases) 23 12 Op 3 56/0.000 - CDS 35384 - 35854 778 ## PROTEIN SUPPORTED gi|237738896|ref|ZP_04569377.1| SSU ribosomal protein S7P 24 12 Op 4 . - CDS 35882 - 36250 627 ## PROTEIN SUPPORTED gi|19704890|ref|NP_602385.1| 30S ribosomal protein S12 - Prom 36297 - 36356 11.8 + Prom 36336 - 36395 18.8 25 13 Tu 1 . + CDS 36417 - 36938 773 ## gi|294781844|ref|ZP_06747176.1| conserved hypothetical protein + Term 36947 - 36978 3.1 - Term 36934 - 36965 3.1 26 14 Tu 1 . - CDS 36975 - 38123 1994 ## COG1454 Alcohol dehydrogenase, class IV - Prom 38267 - 38326 10.4 + Prom 38182 - 38241 12.9 27 15 Tu 1 . + CDS 38454 - 40520 2671 ## COG0480 Translation elongation factors (GTPases) + Term 40528 - 40566 5.5 + Prom 40547 - 40606 5.4 28 16 Tu 1 . + CDS 40634 - 40765 151 ## + Term 40930 - 40984 -0.0 - TRNA 40656 - 40732 95.0 # Asp GTC 0 0 - TRNA 40744 - 40819 94.0 # Val TAC 0 0 - TRNA 40831 - 40906 87.4 # Phe GAA 0 0 - TRNA 40929 - 41012 64.5 # Ser TGA 0 0 - TRNA 41019 - 41093 64.0 # Glu TTC 0 0 + Prom 40970 - 41029 3.0 29 17 Tu 1 . + CDS 41096 - 41275 281 ## - TRNA 41108 - 41185 96.0 # Met CAT 0 0 - TRNA 41193 - 41269 90.7 # Arg TCT 0 0 - TRNA 41277 - 41352 94.1 # Lys TTT 0 0 - TRNA 41362 - 41437 93.2 # Gly TCC 0 0 - TRNA 41462 - 41538 81.5 # Met CAT 0 0 + Prom 41390 - 41449 3.0 30 18 Tu 1 . + CDS 41480 - 41668 364 ## - TRNA 41546 - 41633 70.9 # Leu TAA 0 0 31 19 Op 1 1/0.500 - CDS 41719 - 42021 376 ## COG2827 Predicted endonuclease containing a URI domain 32 19 Op 2 1/0.500 - CDS 42033 - 42902 834 ## COG0470 ATPase involved in DNA replication 33 19 Op 3 1/0.500 - CDS 42905 - 43933 1562 ## COG1077 Actin-like ATPase involved in cell morphogenesis 34 19 Op 4 8/0.000 - CDS 43935 - 44330 479 ## COG1939 Uncharacterized protein conserved in bacteria 35 19 Op 5 1/0.500 - CDS 44318 - 45739 2095 ## COG0215 Cysteinyl-tRNA synthetase 36 19 Op 6 1/0.500 - CDS 45754 - 46449 320 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 37 19 Op 7 . - CDS 46425 - 48761 3077 ## COG1193 Mismatch repair ATPase (MutS family) - Prom 48937 - 48996 9.0 38 20 Tu 1 . - CDS 49005 - 50021 687 ## COG3177 Uncharacterized conserved protein - Prom 50122 - 50181 7.3 - Term 50131 - 50179 7.0 39 21 Op 1 . - CDS 50251 - 50829 604 ## gi|294781855|ref|ZP_06747187.1| hypothetical protein HMPREF0400_02083 40 21 Op 2 . - CDS 50852 - 51187 357 ## gi|294781856|ref|ZP_06747188.1| transcriptional regulator, AraC family - Prom 51209 - 51268 4.4 41 22 Op 1 . - CDS 51299 - 51871 645 ## gi|294781857|ref|ZP_06747189.1| hypothetical prolipoprotein 42 22 Op 2 . - CDS 51896 - 52288 474 ## FN0169 coproporphyrinogen III oxidase 43 22 Op 3 . - CDS 52291 - 52710 513 ## FN0169 coproporphyrinogen III oxidase - Prom 52745 - 52804 6.4 44 23 Op 1 . - CDS 52806 - 53363 812 ## Lebu_1175 hypothetical protein 45 23 Op 2 . - CDS 53363 - 53893 596 ## Lebu_1174 hypothetical protein - Prom 53982 - 54041 11.7 - Term 54022 - 54061 5.4 46 24 Tu 1 . - CDS 54089 - 54376 489 ## FN0038 hypothetical protein - Prom 54396 - 54455 4.1 Predicted protein(s) >gi|292606606|gb|ADGG01000004.1| GENE 1 434 - 1822 1713 462 aa, chain - ## HITS:1 COG:FN1949 KEGG:ns NR:ns ## COG: FN1949 COG0006 # Protein_GI_number: 19705251 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 462 1 462 462 820 90.0 0 MLDKEVYINRRKKLKENFKDGLILIMGNNFSPLDCEDNTYPFIQDATFKYYFGMDHNGLI GIIDIDKNEEMIFGNDYTMSDIIWMGKQKFLKELALEVGIEKFIEKEELKKYLENRKNIR FTNQYKADNIMYLSSILNINPFEFDEYVSFYLIKNIIKQRNIKDKVEIEEIEKGVNITKE MHLTAMKNVKAGMKEYELVAEVEKQPRKYNAYYSFQTILSKNGQILHNHNHLNTLKDGDL VLLDCGALTEEGYCGDMTTTFPVSGKFTERQKIIHNIVRDIFDRAKDLARAGITYKEVHL EACKVLAENMKKLGLMKGEVEDIVSSGAHALFMPHGLGHMMGMTVHDMENFGEINVGYEE GEEKSTQFGLASLRLAKKLEVGNIFTIEPGIYFIPELFEKWKNEKLHQEFLNYDEIEKYM DFGGIRMERDILIQEDGTSRILGDKFPRTADEIEEYMQASRK >gi|292606606|gb|ADGG01000004.1| GENE 2 1915 - 2442 791 175 aa, chain - ## HITS:1 COG:FN1951 KEGG:ns NR:ns ## COG: FN1951 COG2110 # Protein_GI_number: 19705253 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Fusobacterium nucleatum # 1 174 1 174 175 282 79.0 3e-76 MYKDTIKIVSGDITKIPEVEVIVNAANNQLEMGGGVCGAIFRAASGDLAKECKEIGGCAT GEAVITRAYNLPNKYIIHTVGPRYSTGENGEAEKLESAYYESLKLAKEKGLRKIAFPSVS TGIYRFPVNEGAEIALSIAKKFIDENPDSFDLILWVLDEKTYVVYKEKYEKIIKE >gi|292606606|gb|ADGG01000004.1| GENE 3 2530 - 2910 767 126 aa, chain - ## HITS:1 COG:no KEGG:FN1792 NR:ns ## KEGG: FN1792 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 11 126 1 121 121 112 82.0 4e-24 MKKFAMLALAMSLFLVACGEKKEEQKPAEQPAAEATATTTEAPAAEVKAFSVKTEDGKEF TLEVAADGATATLTDAEGKVTELKNAETASGERYADEAGNEVAMKGAEGILTLGDLKEVP VTVEAK >gi|292606606|gb|ADGG01000004.1| GENE 4 3146 - 4873 2733 575 aa, chain - ## HITS:1 COG:FN1793 KEGG:ns NR:ns ## COG: FN1793 COG1080 # Protein_GI_number: 19705098 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Fusobacterium nucleatum # 2 574 7 579 579 981 90.0 0 MKNNLIKGIPASPGIAIGKAFLYKETNLEILEKSILSKEEELERLIRGREVAKKQLEEIK ENTFKKLGKDKADIFEGHITLLEDEELFSEIDSKISEKKCTAEFALNEAIDEYANMLANL EDAYFKERAGDLRDIGKRWLYGVMNTQIVDLSKLEPETIIVARELNPSDTAQINLENVLA FVTEIGGKTAHSSIMARSLELPAVVGVGAVLENLEDNQILIVDALNGEVIVNPDEETLKI YREKRENFLKEKEELKALKDKEAVSKDGTKVDVWGNIGSPNDLKGIISNGGFGIGLYRTE FLFMEKDSFPTEDEQFEAYKIVAEGLKGYPVTIRTMDIGGDKSLPYMELPQEENPFLGWR AIRVCLDRQEILKTQFRALLRASKYGQIKIMLPMIMDIEEVRKAKAIFEKCKKELREEDI EFDEKIMLGIMVETPAVAFRAKYFAKECDFFSIGTNDLTQYTLAVDRGNEKIANLYDTYN PAVLQAIKMLIDGAHEGGIKISMCGEFAGDENAVAILFGMGLDAFSMSGISIPRVKRILM KLDKKECENLVERILELSTASEIKNEVKEFMKNID >gi|292606606|gb|ADGG01000004.1| GENE 5 4942 - 5205 381 87 aa, chain - ## HITS:1 COG:FN1794 KEGG:ns NR:ns ## COG: FN1794 COG1925 # Protein_GI_number: 19705099 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Fusobacterium nucleatum # 1 87 1 87 87 132 97.0 2e-31 MKSKTVEIVNETGLHTRPGNEFVSLAKTFSSQISVENEAGTKVNGTSLLKLLSLGIKKGS KITVYADGEDENEAVDKLSSLLENLKD >gi|292606606|gb|ADGG01000004.1| GENE 6 5426 - 5671 473 81 aa, chain + ## HITS:1 COG:no KEGG:FN1796 NR:ns ## KEGG: FN1796 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 78 1 78 79 92 85.0 3e-18 MERLKEDEIKKIIDELKKTGKYKEYQEMLLDDFEEHHVVYKIEADELIAIAHKKNTIPYK LIEFYDWQQMNYLIEEEDGIE >gi|292606606|gb|ADGG01000004.1| GENE 7 5779 - 6204 528 141 aa, chain + ## HITS:1 COG:FN1548 KEGG:ns NR:ns ## COG: FN1548 COG1585 # Protein_GI_number: 19704880 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Fusobacterium nucleatum # 3 141 1 138 138 177 75.0 4e-45 MTVGYIFWLILTIIFTIIEFAIPALVTVWFAFAAALTVFVSLISDSMKVEITFFTVVSLL SIIFLRPYARAILSKNKDNFDAEKIDTAIIIKKIVDTSKEEKIYDVSYKGSIWTALSNEL FEVGDTPVISSFKGNKIILKK >gi|292606606|gb|ADGG01000004.1| GENE 8 6222 - 7106 1171 294 aa, chain + ## HITS:1 COG:FN1549 KEGG:ns NR:ns ## COG: FN1549 COG0330 # Protein_GI_number: 19704881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Fusobacterium nucleatum # 1 293 1 293 294 474 92.0 1e-134 MFYIPFFVLLLILLAVIALKAIKIVPESQVYIIEKLGKYNQSLSSGLNLINPFFDKVSRI VSLKEQVVDFDPQAVITKDNATMQIDTVVYFQITDPKLYTYGVERPLSAIENLTATTLRN IIGDMTVDETLTSRDIINTKMRQELDDATDPWGIKVNRVELKSILPPNDIRIAMEKEMKA EREKRAKILEAQATRESAILVAEGEKQSAILRAEAEKEVKIKEAEGKAQAILEIQRAEAE AIKLLNEAKPAKEILALKSFETFEKVADGKSTKILIPSEIQNLAGFMQTIKEIN >gi|292606606|gb|ADGG01000004.1| GENE 9 7244 - 8410 1768 388 aa, chain + ## HITS:1 COG:FN2107 KEGG:ns NR:ns ## COG: FN2107 COG0153 # Protein_GI_number: 19705397 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Fusobacterium nucleatum # 1 388 1 388 389 683 89.0 0 MLENLKKEFKEIFKYDGEVETFFSPGRVNLIGEHTDYNGGFVFPCALDFGTYAVVKKRED KIFRMYSKNFKNLGTIEFNLDNLVYNKRDNWVNYPKGVVKTFLDENYKIDSGFDVLFYGN IPNGAGLSSSASIEVLTAVILKDLFKLDVDMVEMVKMCQVAENKFIGVNSGIMDQFAVGM GKKDHAILLDCNTLKFEYVPVKLKNMSIVIANTNKKRGLADSKYNERRSSCEEAVKVLNN NGINIKYLGELTVAEFDKVKHFITDEEQLKRATHAVSENERAKVAVEFLKKDDIAEFGRL MNQSHISLRDDYEVTGIELDSLVEAAWEEEGTIGSRMTGAGFGGCTVSIVENDYVENFIE NVGKKYKEKTGLKATFYIANIGDGAGKI >gi|292606606|gb|ADGG01000004.1| GENE 10 8558 - 10090 1995 510 aa, chain + ## HITS:1 COG:FN2108 KEGG:ns NR:ns ## COG: FN2108 COG4468 # Protein_GI_number: 19705398 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Fusobacterium nucleatum # 1 510 1 509 509 940 90.0 0 MEIYSLINRLIKYSLKNSLITEDDVMFVRNELMALLQLKDWEDVNEDNYQIPEYPQEILD KICDYAIEQKIIEDGTTDRDIFDTEVMGKFTPFPREVINTFKNLSDENIKSATDYFYNFS KKTNYIRTERIEKNLYWKSPTEYGDLEITINLSKPEKDPKEIERQKNMPQVNYPKCLLCY ENVGFAGTLTHPARQNHRVIPLTLENERWYFQYSPYVYYNEHAIIFCSEHREMKINRDTF SRTLDFVNQFPHYFIGSNADLPIVGGSILSHDHYQGGNHEFPMAKSEIEKEISFDAYPNI KAGIVKWPMTVLRLKSLDRNELIELSDKILKAWREYSDEEVGVFAYTNSTPHNTITPIAR RRGEYFEIDLVLRNNRTDEANPLGIFHPHSEHHNIKKENIGLIEVMGLAVLPGRLKFEMR KIAEFLKDKNFEKKISEDKDCQKHLSWLKAFINKYPNIENLSADEILENILNVEIGLTFS RVLEDAGVFKRDEKGKNAFLKFINHIGGRF >gi|292606606|gb|ADGG01000004.1| GENE 11 10090 - 11079 1577 329 aa, chain + ## HITS:1 COG:FN2109 KEGG:ns NR:ns ## COG: FN2109 COG1087 # Protein_GI_number: 19705399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Fusobacterium nucleatum # 1 329 1 329 329 670 96.0 0 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDEKAHLELGDLKDEEFLNR VFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLKVMKAHNVDKIVFSSTAAT YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL RNGGDSQVFNLGNGEGFSVKEVIEVTRKVTGHPIPAEVSPRRAGDPARLIASSQKALDTL KWVPKYDKLEQIIETAWNWHKNHPNGYED >gi|292606606|gb|ADGG01000004.1| GENE 12 11102 - 11908 1069 268 aa, chain - ## HITS:1 COG:FN2111 KEGG:ns NR:ns ## COG: FN2111 COG2849 # Protein_GI_number: 19705401 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 216 1 215 219 214 60.0 9e-56 MKKILLGVFLLVSVLSFSAERILSYEETFLDKETGIVYAIGEEIPYTGVVKNYKFLGGDS ILEGRIIFKNGLMEGTFKLLYPSGKTASIATYKNGKKEGEQKDFYENGVIRLEILYKNDK MNGIGKKYSTKGILRGEFPYKDDELNGVAKQYNEVTGKLEIEADYKNGKTEGSVKKYYPN GKLESEQRYKNDLREGLTELYYEDGSLKAEKFYKNGKLQGINRIYYPNGKLQTEANFKDD MLDGNFKEYDETGKLIKQGTYKDDVRLK >gi|292606606|gb|ADGG01000004.1| GENE 13 11929 - 13086 1539 385 aa, chain - ## HITS:1 COG:FN2111 KEGG:ns NR:ns ## COG: FN2111 COG2849 # Protein_GI_number: 19705401 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 212 1 215 219 238 70.0 2e-62 MKKIILGAFLLVSALSFSAGRKVPAGKIVMDQNTGIAYVQGEQIPFTGTVEVKFDNGKVL ALMEVKNGLMEGTYKLLYPSGKTAIIATYKNGKTDGIQKEYYENGQIKMEVLDKNGKAEG YLRTYYLNGKLEGEEKYQNGLREGLTKSYYEDGSLEGERFYKNNNLEGINKIYHPNGKLA KIAVFKNGELDGTVKTYYPNGKLEGIGTFKDGKIDGIQKEYYENGQIKMESLAKNDKKNG IARFYSITGVLIAEIPFKDDEVDGTIKNYNEVTGKLEAESEFKNGKVEGTTKEYYPNGKV AIEEKYQNNLREGLSKSYYENGVLKAEKFYKNDKLQGINKIYYPNGKIQMEANFKDDKLE GIVKRYNENGKLIEQEIYKNGNRIK >gi|292606606|gb|ADGG01000004.1| GENE 14 13123 - 13860 957 245 aa, chain - ## HITS:1 COG:FN2118 KEGG:ns NR:ns ## COG: FN2118 COG2849 # Protein_GI_number: 19705408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 245 1 245 245 387 87.0 1e-107 MKKILLGVFLLVSVLSFSAERVVKLENAYVDDKGIVYVIGEKAPFTGIVENYKVPPISEG DSVLEGKIPFKNGVMEGYSKLYYPSGKLASVATFKNGKVEGIQKDYYENGKIKREISHKN GLVDGVSKLYYPNGKVQNEITHKKGIPDGVSKTYYENGKLLAEVTYKNGIEVGIQKDYYE NGKLKVELPYKNGVVDGLAKVYYPTGKLMSEENYKNNQLDGIVKRYDENGKLIEQEVYKN GNRIK >gi|292606606|gb|ADGG01000004.1| GENE 15 14047 - 14553 815 168 aa, chain - ## HITS:1 COG:FN2116 KEGG:ns NR:ns ## COG: FN2116 COG2849 # Protein_GI_number: 19705406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 168 1 168 168 211 64.0 5e-55 MKKLLLGAFLLVSALSFSAERKVPAERIMMDQTTGIAYVQGEQTPFTGVVEVKFDNGKVQ ALMEIKDGLLDGKTITYFPNGKVQSRENYKNGYEEGANIIYYENGQVEYEKYVKDSGKIV YEKHYHPTGQLDFEASYKDEKLDGIVKKYDENGQVAQQGIFKDGGQIQ >gi|292606606|gb|ADGG01000004.1| GENE 16 14574 - 15305 869 243 aa, chain - ## HITS:1 COG:FN2118 KEGG:ns NR:ns ## COG: FN2118 COG2849 # Protein_GI_number: 19705408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 243 1 245 245 310 67.0 1e-84 MKKILLSVILLISSLSFSAERLTKIENTYMNDKGVVYVTGEDTPFTGIVENYKTSNGETT LEGKIPFKNGLMEGTSKLFYPSGRLGSIATFKNGKIEGVQKDYYEKGIIKKETSYKNGLI DGLTKLYYPNGNIQSEMLYKKGVLDGITRTYHKNGKVNVEASYKNGVQVGVQKDYYQNGR LKIELPLDKNGLMSGMVKIYYPSGKIMSEESYKNDKLDGIVKRYDESGNLTSEETYQNGN RIK >gi|292606606|gb|ADGG01000004.1| GENE 17 15447 - 17048 2129 533 aa, chain - ## HITS:1 COG:no KEGG:FN1554 NR:ns ## KEGG: FN1554 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 533 1049 1582 1582 690 68.0 0 MVQKKEKKSVARDLNKNLGLGKDKISIDVPAGATTGTIKLNDIVKIPEIIDTKKLELEET QVSTVGMYINTSGTKFTKPITGLSALTQLRKADLIIGAEATQSTTSKYIQVGKNILKPYN DTILHNPQINKWSIYSGSLTWMANISQNQVNGTIQNAYLAKIPYAVFAKDKNTYNFTDGL DQRYGKETLGNRENELFQKLNSIGNNEEVLLFQAYDEMMGHQYANTQQRVQSTGAILDKE FNYLRDEWKNVSKDSNKIKTFGTSGEYKTKTAGIIDYTNNAYGVAYIHEDETVKLGESTG WYTGIVHNTFRFKDIGNSKEEQLQGKLGLFKSIPFDHNNGLNWTISGDIFAGYNKINRKF LVVDEVFNAKGKYYTYGIGAKTELSSEFRLSEDFSLRPYASLKLEYGRVSKIREKSGEMK LDVKSNDYFSIKPEIGAELAYRHYFGANTVKATVGVAYENELGRVSNGKNQAKVAGTDAD YFNIRGEKDDRTGNVKTDFSVGWDNQRVGVTANIGYDTKGHNVRAGVGLRVIF >gi|292606606|gb|ADGG01000004.1| GENE 18 17002 - 22863 7724 1953 aa, chain - ## HITS:1 COG:no KEGG:FN1554 NR:ns ## KEGG: FN1554 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 870 1946 1 1053 1582 580 41.0 1e-163 MNNNLDTMEKNLRSIAKRYENVKYSVGLAVLFLMKGISAFSDDNKIQEIEKQKDILTDVK KEKSEIKEKKSVKQANQKLKASWTNMQFGANDMYSNYFFAPKAKVDKASLVKSEKTILVA SADNTSTLPMFAKLLTDIEETTETRTQVLTTAEIRASKDNLRNSVGNLQNKINIARQENN KEIEGLKLELTQLMEQGDQVVKSPWSSWQFGANYMYEKWNGAYKGRGDKKEKYAFEGIFT RSNDLFLRNISPLDNKDRDIYEKYTKSVKDNVINSALTSTLLQRGKSISYGLVTNTNTQE PLVSIEINAAVKPKTIQKTPLALSIPGINAPNVPIPTINLSAPINLELPHPNTPSKVVVI AKPNAEPFTGYYFDGTWSHRELRDNISIYSGIDPTSLIGNINNTNPTPAAMTGSYNGRAF EGTRIINENNRYTNAYYINSQTNATKLENNTFYLRGHYSTDTYNDSNTRAHLGISNNAQR VYNDGHGNGIPDEGVVGVHALGDLNIKNIVFNLYGRAGAVTNETWRHGILDFDNVTVNMY NSDNMGFYNMPVARYTYKYGKNVGGIGREWRVLAGGFSGKANVNMYGRNNSVYLTTGLSY MKHWQNEGLIQSDGASNIVYSSFSYAPTLSKLVNPAGAGYLHNTNMIKLSNVKLYGDENI GMYFGSRIKGDIAKVHMEAPNEIESLYGYNNKAAHIGLYQGEIDFSAKIGEKLTIDNRNK QTAEGNLNNTGYTNETVDGAVGIFSESGQRVGIVARGDVMEGPTPTAAEISAHSTDPTWD RWFWHKWNSTTQQIEIDKTGYGAGFYYAASNDFSKDPIHNLEVAKLDIRFGKYSKNGIMV LAKQGTVIDVGKNTSNYHITGVSSDITDGINGANTLEADASTGTIVAYAEGTWDQLKHRY GSEDARIAQNDADAVAINNGAARKSLTDANATTAAKLQGLGSEININPNVVLASKEGIAY MGDNQGIVNAMGTTEAVNYGSIIAYAKNKGQVTVNGAVKAEDKNTVSEANKFKNIGAFAE AGGKAELKGAVTINGIGAFAKGAGSEAILSSTNNDVTINAGTVGGIVATDNGYAKLNGGT INVTKDNSRLFYADATGKIDFTRTTNINVSKGIILPQEESNPAFYNSKVSTATGVTPTKY NGMENVTINLLSDDVVLRTVDNHTPETWTGGANFETNVKNIMKYSALNKNGHTYKAYYTN GKFKIVTNVNLDDATDIFNGIVMGNEEVTIDNGISITSNAGKGLAQAALKNTVDNSKTAY INNGTVNITGANSGSIALKVDHGTIENNGLVSMTDGIGLYGSSGSKISNNANGKISISSP SQHGIGIAGFLTGTTAQNYGTDKLIANLIATSGGNLPSSIKTIDITNNGKIEIAGKAVGI YADNTSKVAGFNNHITKENAVVNNNASLSFGDESIGILAKKAIVNLSGTGKDDISVGKNG IGVATEDSTVNLLTDYGFQIKDKGVGIYAKNTNTSTGTMNVKYTGAVDKVGTGAYFEGTG SPLTNKLNINLENTSHATKGMIGIYAKNGNFTNEGNIKITNTNTLGFGIISSGADITNKG NITLEDSLNSSKPNIGMYTAGSASLKNMGKITVGKNGIGVYGKNITNGDSVTLPNSTIEV GENGIGIYTKAGAGENVKLESGNIKVGKDGVGVYTEGNGGTIRATNTFNMTLGDGSSAAN KGAFGFVNVGSNNKIYSDISNVNLQNNSMYIYSKDTSGTSVNPQVVNNTNITTTGKNNYG IYSAGYVVNNGNMNMSAGTGNVGVYSINGGTIENRSGVITVGGSIPVNDEYGIGMAAGYT WTKKDLEKPISQRPQQTIGNIINRGTINVNGQFSLGMYGSGNGTTVNNYGTINLNADNTT GMYLTDGAVGKNYGTITNTPGVKNVTGVVVKNGARFVNDTSGVVRLNATNAVGILATKDE GKPLGTYIINYGTFDITGDGSKKRKKICSKRSK >gi|292606606|gb|ADGG01000004.1| GENE 19 23140 - 30402 9514 2420 aa, chain - ## HITS:1 COG:no KEGG:FN1554 NR:ns ## KEGG: FN1554 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 814 2420 1 1582 1582 1271 51.0 0 MGNNSLHNTEKNLRSIAKRYENVKYSVGLAVLFLMKGTSAFSDANVIQDVEKQKDILTDI KKEKTEIKETKKKSQSTQKLKASWANMQFGANDMYSNFFATPKTKVEKTSVVKSEKAVLV ASADNSVSLPMFAKLTSDIEATYTNTPTMEEIKVSKENLRDSVGNLQSKIDVAKKENEKE INGLRLELIQLMEQGNQVVKSPWPSWQFGANYFYDNWGSSYKGKGDKKEKYPFEGIYTRS NNLFLRNISPLDNVDRDIYKKYTESIKDNAVNSALNSTLNARGRSTRYGLASNSGAQEPV VTIEINAGIKPKSIQKNPITLNFTAPNAPNIPTPSISQVMPPSLSLPEPKAPSKEISIVK PNANPFTGFFFNSNHSSIGVGDTNMVLYSGVNPDDIKAGKEGEQVRPALKTGALNTTLGD ITNINQRPTNILYRMAPSLNNLTFHIRGYFGDGSDGYVDAGSGATGGSDTVGGPTLGTIG VHTLLNGTVSNVTANLYGRAGFLTSETWRHGKVTMHNTNVNVYGKDNAVYYIMPAAFKTI SKYTDSNYHLGAIQGETNVKMYGTGNTVYLSSGISAARLIKNTGKIELEGASNIVYSSFS YAPTWEVGVYGGKAGKMNSLIQFNQNVELYGDENVGLFFGSKIGGSPKSWETTDRDAESN AGYLRKASYIGIYQGEIDVKARVGGQLAIDPTATTQTASGQLVEDLTNPTAPKYKGYTDK TVDGGVGLYVTSGQRKGIDVLKDMGVPVSVTPTLDDLKLDPIHNLEVGKMDISFGKYSKN GFMMIAKDGSVIDVGKTTHQYYVTNLSTSITDGVNGATTTEADASTGTTIAYAEGTWDQS KHQLGTKQADLNQNNTDAAAVNAGAARKALTDTTASTAAKLQGLGSEINVYPNVVLASKE GIAYMGDNQGIVNAKGTTEAVNYGAIIAYAKNKGKVIVDGTVTAIDKNTTLEDNKYKNIA AFAESGGQVDINRKVTINGIGAFAKGTDSKAQLLSGTDEINAGVVGGMVATEGGYARLNG GTIKITKDNSRLFYADATGKIDFTNTTTIEMSKGIILPQEENNTAFYASKATTEAGAVPT KYNGMRNVTINLLSDDVVLKTVNNHPLETWTGSTNFESGIQSVMKYAALNKNGHTYKVYY TNGAFKVATNVNLDSTSDVFNSIIMANEKVTIDNGVSITSNTGKGLVQGSLANTVDNSKT AYINNGTVNITGANSSSIALRVNHGTIENNSLVKINDGIGLYGSNGSKLHNKSNGTIQIS SASNYGVGMAGFLSGTTPQNYGTDKLISALIAGGTANKLAPTIKTIDITNEGNIDITGKA IGIYADNTSTIAGFDNRVTKENAVVNNKASLNLGDGSIGILTKKATLNLTGTGTNDISVG KNGIGVYVKDSSVNFLTNYGFQIKDKGVGIYAENSDTSTGTMNVKYTGATTEAGTGAYFK GTGSNSLTNKLDINVDNVSNTTKGMIGIYAKDANFTNEGKIKVTNTNTLGFGIIASTADV TNKGEITLEDSLNPSKPNIGMYTVGSAPLRNLGKVTVGKNGIGIYGKNFSNGDSISQPNS TIEVGENGIGVYTEGGNGYLESGNIKTGKDGVGVYVAGNAGTITADNTFNMTLGDGSSGN NKGSFGFVNVGSNNKIYSDISNVTLQNNSVYIYSTDTSGTLANPQIINNTNITATGKNNY GLYSAGYVVNNGNMNLAAGTGNVGVYSIKAGTIENRNATITVGGSVPGEDEYGIGMAAGY TWTKKDLLKPVSQRPQQTTGNIINRGTINVNGQYSMGMYGSGNGTTVNNYGTINLNSDNT TGMYLTDNAVGTNYGTITNTSGVKNVTAVVVKNGARFVNDTSGVVRLNAANAIGILATKD EGKPLGTYIINYGTFQILGSNSERVKTQNGPKALNKSIGIGKDKISIEVPAGATTGTIKV AGEVKTPEVVDTKKVELEETQVSTVGMYINTSGTKFTKPITGLSALSQLKKADLIIGAEA AQSTTSKYIQVGKNILKPYNDSILNNPQIEKWNIYSGSLTWMANIAQNQTNGTIQNAYLA KMPYTNWAGNEATPVEKKDTYNFLDGLEQRYGVEKIGTRENKVFQKLNSIGNNEEILFHQ ATDEMMGHQYANIQQRIQATGNILDKEFKYLRSSWSNPSKDSNKIKTFGARGEYKTNTAG VIDYKNNAYGVAYVHEDETVRLGESTGWYTGIVHNTFRFKDIGNSKEEQLQAKLGLFKSI PFDHNNGLNWTISGDIFAGYNKINRRFLVVDEVFNAKGRYHTYGLGLKSQLNSEFRLSEG FSIKPYVAIGLEYGRVSKVREKSGEIKLEVKSNDYFSIRPEIGAELGFKHHFDRKTVRVG VSVAYENELGKVANGKNKARVAGTDADWFNIRGEKEDRRGNIKSDLNIGVDNQRVGVTAN IGYDTKGHNVRAGVGLRVIF >gi|292606606|gb|ADGG01000004.1| GENE 20 30572 - 31813 1663 413 aa, chain - ## HITS:1 COG:FN1801 KEGG:ns NR:ns ## COG: FN1801 COG0786 # Protein_GI_number: 19705106 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 1 411 1 411 413 681 90.0 0 MNFETIEGILNINLNSTMTLALAAILLIMGYSINKRVSILNKYCIPAPVVGGFIFMFLTW IGHVTGSFKFNFENIFQSTFMLAFFTTVGLGASFALLKKGGKLLIIYWLTCGIISICQNI IGITITKITGLEAPYALLSSAISMIGGHGAALAYGGTFAKMGYENAPLVGAAAATFGLIT AVLIGGPLGRRLIEKNNLRPDDSENFDQSVTEINTDKGEKLSDLDVIKNVVVILVCMAIG SYISTLIGKLINMDFPSYVGAMFMAVIVRNINEKTHTYNFNFSLVDGIGNVMLNLYLALA LMTLKLWELSGLIGGVLLVVACQVVFMIIIAYFVVFRILGSNYDAAVMCSGLCGHGLGAT PSAIVNMTAINEKYGMSRKAMMIVPIVGAFLVDIIYQPATVWFIKTFVENYAG >gi|292606606|gb|ADGG01000004.1| GENE 21 31992 - 33176 1542 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 392 1 405 407 598 72 1e-170 MAKEKFERSKPHVNIGTIGHVDHGKTTTTAAISKVLSDKGWAKKVDFDQIDAAPEEKERG ITINTAHIEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLSRQVGVPYIVVYLNKSDMVDDEELLELVEMEVRELLTEYGFPGDDIPVIRGSSLGALN GEQKWVDQILALMDAVDNYIPTPERAVDQPFLMPIEDVFTITGRGTVVTGRVERGIIKVG EEIEIVGIKPTTKTTCTGVEMFRKLLDQGQAGDNIGVLLRGTKKEEVERGQVLAKPGSIH PHTNFKGEVYVLTKDEGGRHTPFFSGYRPQFYFRTTDITGAVTLPEGVEMVMPGDNITMT VELIHPIAMEQGLRFAIREGGRTVASGVVSEITK >gi|292606606|gb|ADGG01000004.1| GENE 22 33260 - 35341 3001 693 aa, chain - ## HITS:1 COG:FN1556 KEGG:ns NR:ns ## COG: FN1556 COG0480 # Protein_GI_number: 19704888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 693 1 693 693 1319 96.0 0 MARKVSLDMTRNVGIMAHIDAGKTTTTERILFYTGVERKLGEVHEGQATMDWMEQEQERG ITITSAATTCFWKGHRINIIDTPGHVDFTVEVERSLRVLDGAVAVFSAVDGVQPQSETVW RQADKYKVPRLAFFNKMDRIGANFDMCVSDIKEKLGSNPVPIQIPIGAEDQFEGVVDLIE MKEVVWPVDSDNGQHFEVKDIRAELQEKAEEARQYMLESIVETDDALMEKFFGGEEITKE EIVKGLRKATIDNTIVPVVCGTAFKNKGIQALLDAIVNFMPAPTDVAMVEGRDPKDPEKL IDREMSDDAPFASLAFKVMTDPFVGRLTFFRVYSGIVEKGATVLNSTKGKKERMGRILQM HANKREEIEQVYCGDIAAAVGLKDTTTGDTLCAEDAPIVLEQMEFPEPVISVAVEPKTKN DQEKMGIALSKLAEEDPTFRVRTDEETGQTIISGMGELHLEIIVDRMKREFKVESNVGKP QVAYRETITQSYDQEVKYAKQSGGRGQYGHVKIILEPNPGKEFEFVNKITGGVIPREYIP AVEKGCREALESGVIAGYPLVDVKVTLYDGSYHEVDSSEMAFKIAGSMALKQAATKAKPV ILEPVFKVEVTTPEEYMGDIIGDLNSRRGMVSGMIDRNGAKIITAKVPLSEMFGYATDLR SKSQGRATYSWEFSEYLQVPASIQKQIQEERGK >gi|292606606|gb|ADGG01000004.1| GENE 23 35384 - 35854 778 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237738896|ref|ZP_04569377.1| SSU ribosomal protein S7P [Fusobacterium sp. 2_1_31] # 1 156 1 156 156 304 100 8e-82 MSRRRAAVKRDVLPDSRYSDKVVTKVINSIMLDGKKSIAEGIFYSAMDLIKEKTGQEGYD VFKQALENIKPQIEVRSRRIGGATYQVPVEVKADRQQTLAIRWLTTYTRARKEYGMIEKL AAELIAAANNEGATIKKKEDTYKMAEANRAFAHYRV >gi|292606606|gb|ADGG01000004.1| GENE 24 35882 - 36250 627 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19704890|ref|NP_602385.1| 30S ribosomal protein S12 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 122 1 122 122 246 100 3e-64 MPTLSQLVKKGRQTLTEKKKSPALQGNPQRRGVCIRVYTTTPKKPNSALRKVARVKLTNG IEVTCYIPGEGHNLQEHSIVLVRGGRTKDLPGVRYKIIRGALDTAGVAKRKQGRSKYGAK NA >gi|292606606|gb|ADGG01000004.1| GENE 25 36417 - 36938 773 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294781844|ref|ZP_06747176.1| ## NR: gi|294781844|ref|ZP_06747176.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 173 1 173 173 271 100.0 1e-71 MNLKEVKNILKNSKYLSKTKIEDEVEISGTISLWNRNDVDIIIEFDDENDINFSEDTLKL IEEKLNWIDKNKKLICKTFIEDEGVFYGLNDEIEKQLSKKEKAKIDDLEFSAPLTEDEFS NSLYIAYINFYIVDEDDISCNFDLDCEPDYLFGHLANIELDEDNEILMSGING >gi|292606606|gb|ADGG01000004.1| GENE 26 36975 - 38123 1994 382 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 2 382 4 383 383 418 57.0 1e-117 MNRYVLNETSYFGAGCRTELATEVKTKGYKKALLVSDRVLASCGVLDKVKEVLNKAEIVY DEFLEIKQNPTIKNCQDGLEAFKKSGADFIIAVGGGSVMDTSKAIGIVYNNPSFADIKSL EGVPNTTKRSVPIIALPTTCGTAAEVTINYVITVEEENRKIVCVDPKDIPVVAIVDAELM QSMPARTIASTGMDALTHAIEGYITKGAHILSDMYEIQAIELIAKHLRGAVKDKNIVDME GMSIGQYVAGMGFSNVGLGIVHSMAHPLGGVYDIAHGVANALLLPIVMEYNMPACIDKYG NIAKAMGVDITNMSKEEAAKAAIDAVRQLAIDVNIPQTLRELNIPKEGLPRLAKDALADV CTGGNPREVTYEDILKLYEIAY >gi|292606606|gb|ADGG01000004.1| GENE 27 38454 - 40520 2671 688 aa, chain + ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 688 3 690 690 1262 92.0 0 MKVFTTDNIRNISLLGHRGSGKTTLIESILYVKDYIKRKGDVENGTTVSDFDKEEIRRIF SINTSLIPVEHNNVKLNFLDTPGYFDFVGEVVSSLRVSASAVLVLDATAGVEVGTEKAWK LLEERKLPRIIFVNKMDKGYVNYTKLLTELKEKFGKKIAPFCIPVGEKDEFKGFVNVVDM VGRVFDGKECVDTPIPDDVDVSEVRNLLFEAIAETDEALMDKYFAGEEFTQEEIVKGLHK GVVNGDIVPVMVGSAQQNIGIHTLLNYLDLYMPCPTELFSGQRVGEDPVTQQEKVVKISD ENPFSAIVFKTLVDPFIGKITFFKVNSGVIRKETEVFNPKKNKKERIAQLITMQGNKQIE VEELHAGDIGATTKLLYTQTGDTLCDKSYPVVFNKIRFPKPNIFSGVLPTDKNDDEKLST ALQRVMEEDPTFVVTRNYETKQLLIGGQGEKHLYIILCKIKNKFGVHAELQDVIVSYRET ILGKAEVQGKHKKQSGGAGQYGDVFIRFEPSENDFEFVDEIKGGVVPRNYIPAVEKGLME AKEKGVLAGYPVINFKATLYDGSYHAVDSNDLSFKLAAILAFKLGMEKAKPILLEPVVKM KITIPEEYMGDVMGDLNKRRGRVLGMDHNEAGEQLLFAEVPEAEILKYSIDLRALTQGRG EFEYEFVRYEEVPENISKRVKEERNKDK >gi|292606606|gb|ADGG01000004.1| GENE 28 40634 - 40765 151 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVYYFIMAGVTRLELATSCVTGRRSNQLSYTPKNKNGGHNRT >gi|292606606|gb|ADGG01000004.1| GENE 29 41096 - 41275 281 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKKWWIQLDSNQRPLGYEPSALTKLSYGSTYMAYLEGFEPPTHALEGRCSIQLSYRYI >gi|292606606|gb|ADGG01000004.1| GENE 30 41480 - 41668 364 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLRPSGYEPDELPDCSTPRYKWCLEPESNRHGTKYHGILSPVRLPIPPSRHLYFCLSLS EH >gi|292606606|gb|ADGG01000004.1| GENE 31 41719 - 42021 376 100 aa, chain - ## HITS:1 COG:FN1575 KEGG:ns NR:ns ## COG: FN1575 COG2827 # Protein_GI_number: 19704896 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Fusobacterium nucleatum # 1 98 1 98 100 115 77.0 2e-26 MSFYLYMLRCEDRSIYTGTAKDYLKRYEEHLSGKGAKYTKSHKVKKIERVFLCENRSIAC ILESEIKKLTKNKKEAIIIEPDIYVKELENARKIKILKKI >gi|292606606|gb|ADGG01000004.1| GENE 32 42033 - 42902 834 289 aa, chain - ## HITS:1 COG:FN1576 KEGG:ns NR:ns ## COG: FN1576 COG0470 # Protein_GI_number: 19704897 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Fusobacterium nucleatum # 1 289 1 289 289 411 86.0 1e-115 MLDEFLKNELSFNREAGTYLFYGDDLEKNYRIALEFSAALFSRNIENEDEKSKIKDKTLR NLYSDLMVVDNLNIDTVRDIIKKTYTSSHEGGAKVFILKNIQDIRKESANAMLKIIEEPT RDNFFILISKRLNILSTIKSRSIIYRVRKSTPEELGVDKYVYNFFLGISNDIAEYKEQEI DLMLEKSYKSVAGVLKEYEKEKKIVVKIDLYKCLRNFVQESTSLKKYEKIKFAEDIYSNA SKESINLIVDYIINLVKKNKNLKEKLEYKKMLRYPVNMKLLLINLLLSV >gi|292606606|gb|ADGG01000004.1| GENE 33 42905 - 43933 1562 342 aa, chain - ## HITS:1 COG:FN1577 KEGG:ns NR:ns ## COG: FN1577 COG1077 # Protein_GI_number: 19704898 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Fusobacterium nucleatum # 1 342 1 342 342 598 95.0 1e-171 MGFFNFRANRSIGIDLGTANTLVYSKKHKKIVLNEPSVVAVEKETKKVLAVGNEAREMLG KTPDTIVAVKPLSEGVIADYDITEAMIKYFIKKIFGSYSFFMPEIMICVPIDVTGVEKRA VLEAAISAGAKKAYLIEEARAAALGSGMDIAAPEGNMIIDIGGGSTDVAIISLGGTVVSK TIRVAGNNFDNDIVKYVKKTYNLLIGDRTAEEIKIKIGTALPLEEEETIEVKGRDLLMGL PKVITITSEEVREAIKDSLDQILQCIRTVLEKTPPELAADIVDKGMMMTGGGSLIRNFPE MITKYTNLKVNLAENPLESVVIGAGLALDQIDVLRKIEKAER >gi|292606606|gb|ADGG01000004.1| GENE 34 43935 - 44330 479 131 aa, chain - ## HITS:1 COG:FN1578 KEGG:ns NR:ns ## COG: FN1578 COG1939 # Protein_GI_number: 19704899 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 114 1 112 129 185 85.0 2e-47 MDNVDKLSTKDIRDYTGLELAFIGDAIWELEIRKYYLQFGYNIPTLNKHVKNKVNARYQS LIYKQIIEELDEEFKVIGKRAKNSNIKTFPKTCTVMEYKEATALEAVVGAMYLLNKEEEI KKIINIVIKGE >gi|292606606|gb|ADGG01000004.1| GENE 35 44318 - 45739 2095 473 aa, chain - ## HITS:1 COG:FN1579 KEGG:ns NR:ns ## COG: FN1579 COG0215 # Protein_GI_number: 19704900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 473 1 473 473 873 90.0 0 MIKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK VTYVQNFTDVDDKMINKANAENVSIKEIAERYIKAYFEDTAQINLKEDGMIRPKATDNID GMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDVNEIKKDAL DFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLIFPHHENEM AQSKCACGGTFARYWMHNGYININGEKMSKSSGSFILLRDILKYFEGRIIRLFVLGSHYR KPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELLATKKEMEAKFIEAMD EDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVLDEVYSYLVMIIEEVLGVKLKLEAE VNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKDGKDKTTWTM >gi|292606606|gb|ADGG01000004.1| GENE 36 45754 - 46449 320 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 15 227 7 216 234 127 34 1e-28 MYSGDSKIEKKVTFILAAAGQGKRMNMSLAKQFLEYKGEPLFYSSLKIAFENQYIDDIII VTNKENIKNIREFCENKKLLSKVKYIVEGGSERQYSIYNAIKKIENTDIVIIQDAARPFL KDKYIEESLKILDNTCDGVIIAVKCKDTIKVIDENGIIVETPNRNNLIAVHTPQTFKFEI LKKAHQIAKEKNILATDDASLVENISGRIKFIHGDYDNIKITVQEDLKYLK >gi|292606606|gb|ADGG01000004.1| GENE 37 46425 - 48761 3077 778 aa, chain - ## HITS:1 COG:FN1581 KEGG:ns NR:ns ## COG: FN1581 COG1193 # Protein_GI_number: 19704902 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 778 1 778 778 1304 94.0 0 MNKHSFNVLEFDKLKELILENIVIDDNREVIENLEPYKDLSALNNELKTVKDFMDLISFD GGFEAVGLRNINSLMDKIKLIGTYLEVEELWDINVNLRTVRVFKARLDELGKYKQLRDTI GNIPNLRMIEDVINKTINPEKEIKDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSLAN AFQERIITERDGRMVTPVKFDFKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETK EKEEIRKILLRIAELLRNNRDDILAIGDKALYLDILNAKSIYAVDNKCEIPTVSNREVLS LERARHPFIDKDKVVPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPA SENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDP IEGAAFAMAVIDYLNEKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLV GIPGESNALTIAQRMGLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARL QEEARLDRERAKQETLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKED AKQIQKNLNMLSTALREEKNKTVEVVKKIKTKVNFKVGDRVFVKSINQFANILKINTSKE SASVQAGILKLEVPFEEIKIVEEKKEKVYNVNTHKKTPVRSEIDLRGKMVDEGIYELETY LDRATLNGYTEVYVIHGKGTGALREGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK >gi|292606606|gb|ADGG01000004.1| GENE 38 49005 - 50021 687 338 aa, chain - ## HITS:1 COG:MA1868 KEGG:ns NR:ns ## COG: MA1868 COG3177 # Protein_GI_number: 20090718 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 32 300 152 416 473 64 24.0 3e-10 MELSLPVNIYHTIAKIHEYKGKQELYVENYSDILEKMIDVAKIQSTKSSNAIEGIYTSDT RLKELMNKKVEPKNRNEEEIAGYRHVLDMIHENYAYIEFNKNDILTLHNQLYSYSYINNK GKFKTMDNTIVEVDALGNKKVRFQPVSSFETEHYFDEMVEAYKKAVKENIPPLILIPALI HDFLCIHPFDDGNGRMSRILTLLLLYKFDYFVGRYISIEMLIEESKESYYKELQNSSEKW HTGENDELPFIKYMLGVFLKAYKECDDRFNLIGKEKLTSAERVFSVIQKSLEPLSKKDIM ILCPNISQRTIERALKELQDNEKIKQVGSGRSTKYIKI >gi|292606606|gb|ADGG01000004.1| GENE 39 50251 - 50829 604 192 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781855|ref|ZP_06747187.1| ## NR: gi|294781855|ref|ZP_06747187.1| hypothetical protein HMPREF0400_02083 [Fusobacterium sp. 1_1_41FAA] # 1 192 1 192 192 365 100.0 1e-100 MRGHAVYFFMLKDDLIESFKRVEEKLGGLQYVVHTFYDEPKFEIFDSIEKITDIGLITPI EPNYFIALKNEKFSMREIKLKSGELCYDIQDKQGFLQFFPSGIFENSNCIKRGEINTVAE TDSRLMLFKELKKSILKNSMKINRGISTYVGKSIIENKEKYRIPYGSPASPPEEDFDVSD MVWQEKGRKKKD >gi|292606606|gb|ADGG01000004.1| GENE 40 50852 - 51187 357 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781856|ref|ZP_06747188.1| ## NR: gi|294781856|ref|ZP_06747188.1| transcriptional regulator, AraC family [Fusobacterium sp. 1_1_41FAA] # 1 111 1 111 111 174 100.0 1e-42 MKRVIYKKVINENKENRTEFLLINFDYEDGNDYLAKIFTKEFNMKVEEKKDYIWFSVIKL CKKNTCYELLWHEDIGNIIYSLEQDEDTVNELELRLQKVLDVVNIKILENN >gi|292606606|gb|ADGG01000004.1| GENE 41 51299 - 51871 645 190 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781857|ref|ZP_06747189.1| ## NR: gi|294781857|ref|ZP_06747189.1| hypothetical prolipoprotein [Fusobacterium sp. 1_1_41FAA] # 1 190 1 190 190 298 100.0 1e-79 MKCIRNICLYLKKYISDKQFERIFYQDIDDFKNSLEENIYWKILFSNFNEKEDIISINTD LYNYVEKNYKSLYDEISNAYIEKLIETNEKNEIIDILKKKYKQKEEVFINCCMIDTKLEL IYSIKKALNYPKHCANNWDAIEDFIYDVVLPKKIVLQNWDSIKEKLSQDTIILKKILDKI NPKYSTVLYE >gi|292606606|gb|ADGG01000004.1| GENE 42 51896 - 52288 474 130 aa, chain - ## HITS:1 COG:no KEGG:FN0169 NR:ns ## KEGG: FN0169 # Name: not_defined # Def: coproporphyrinogen III oxidase # Organism: F.nucleatum # Pathway: not_defined # 2 130 1 135 135 99 42.0 4e-20 MLKHDFGIVGEKKEFFLEDNLILYMIDSFEWIKTLSELENNVEKYGLNYHGITYFKEGSI TKLKNIILHWINIFSLGEDVIELRGMYYINIGKHSYNKYKKKYLIESLKKLVVLCEKAEK ENKIIEHWGI >gi|292606606|gb|ADGG01000004.1| GENE 43 52291 - 52710 513 139 aa, chain - ## HITS:1 COG:no KEGG:FN0169 NR:ns ## KEGG: FN0169 # Name: not_defined # Def: coproporphyrinogen III oxidase # Organism: F.nucleatum # Pathway: not_defined # 8 123 8 130 135 83 44.0 3e-15 MLVYSFEMSEKEKVYLSAGVIDTIFDSLKFLKTSDKLKIKKNKGLFYKGSTYIEKENISK LKKIVSSWKGLFSEATQNFVLIGFFNTKIDDYERRNCNKEEVIESLEKLVILCEKAEKEN KIIRCRKLTVKLTNNRGER >gi|292606606|gb|ADGG01000004.1| GENE 44 52806 - 53363 812 185 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1175 NR:ns ## KEGG: Lebu_1175 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 6 166 5 165 185 226 70.0 3e-58 MKYEEQERKIYAKYDDKTIRVYQAYNDKIADEAIKLGTFGEHFSLTRMTWIKPSFLWMMY RCGWAEKENQERVLAIDIKREAFDEIVKNSVISSYKPNLGITEDEWKEEVKNSLVRCQWD PERDIHGKLIGRRSIQLGIRGEAVEKYVNEWIVKITDITDDVKRIKKVLIMELLKKIYYQ KKKST >gi|292606606|gb|ADGG01000004.1| GENE 45 53363 - 53893 596 176 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1174 NR:ns ## KEGG: Lebu_1174 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 12 173 21 178 178 94 37.0 2e-18 MTIEEREMILNLTYLELAEKFKNEPRKVIKFLQDEQKKDIGNDTKYIIEILITLIMIIIE DYYLEDDSFNELLVELAYDKRHRQHEDLAFLLEKKHSPKLINCVYDLAVMELNYMKEDEF FNIARKCTYALGYTNTPKAKEKLELLAKNENELIREYAIKQLNRHDFTDKDVEEQD >gi|292606606|gb|ADGG01000004.1| GENE 46 54089 - 54376 489 95 aa, chain - ## HITS:1 COG:no KEGG:FN0038 NR:ns ## KEGG: FN0038 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 95 6 100 100 115 89.0 4e-25 MNATEKKELMGKYAKKLENAIKREATVMKEIENDKALIKYLEGQKTSGAAFDNTVYESYD AWIETIRKQIKKSESTLTNIEFKKVELEAIQKYIA Prediction of potential genes in microbial genomes Time: Thu May 19 21:17:59 2011 Seq name: gi|292606605|gb|ADGG01000005.1| Fusobacterium sp. 1_1_41FAA cont1.5, whole genome shotgun sequence Length of sequence - 31692 bp Number of predicted genes - 29, with homology - 29 Number of transcription units - 11, operones - 5 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 235 - 888 716 ## gi|294781863|ref|ZP_06747195.1| hypothetical protein HMPREF0400_02091 - Term 1162 - 1203 2.6 2 2 Tu 1 . - CDS 1245 - 1547 430 ## gi|294781864|ref|ZP_06747196.1| conserved hypothetical protein - Prom 1578 - 1637 11.6 3 3 Op 1 . - CDS 1642 - 2040 485 ## gi|294781865|ref|ZP_06747197.1| intracellular protein transporter USO1 - Prom 2083 - 2142 4.6 4 3 Op 2 . - CDS 2165 - 2575 609 ## Lebu_0275 hypothetical protein - Prom 2605 - 2664 15.1 - Term 2647 - 2697 10.5 5 4 Tu 1 . - CDS 2709 - 3020 572 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 3041 - 3100 14.4 + Prom 3103 - 3162 9.9 6 5 Op 1 1/0.000 + CDS 3190 - 4146 276 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 7 5 Op 2 1/0.000 + CDS 4139 - 4792 796 ## COG0164 Ribonuclease HII 8 5 Op 3 1/0.000 + CDS 4813 - 5172 325 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 9 5 Op 4 1/0.000 + CDS 5156 - 5380 129 ## COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 10 5 Op 5 . + CDS 5355 - 6002 483 ## COG1040 Predicted amidophosphoribosyltransferases 11 5 Op 6 . + CDS 6021 - 6620 621 ## FN1367 methyl-accepting chemotaxis protein 12 5 Op 7 1/0.000 + CDS 6635 - 7390 1341 ## COG0149 Triosephosphate isomerase 13 5 Op 8 3/0.000 + CDS 7413 - 8507 1671 ## COG0012 Predicted GTPase, probable translation factor + Prom 8512 - 8571 10.0 14 5 Op 9 . + CDS 8604 - 10040 2108 ## COG0260 Leucyl aminopeptidase + Term 10045 - 10106 12.2 - Term 10037 - 10084 8.1 15 6 Op 1 2/0.000 - CDS 10126 - 11763 2502 ## COG0492 Thioredoxin reductase - Prom 11802 - 11861 6.0 - Term 11832 - 11861 0.5 16 6 Op 2 . - CDS 11872 - 12438 1008 ## COG0450 Peroxiredoxin - Prom 12541 - 12600 12.6 - Term 12763 - 12792 1.4 17 7 Tu 1 . - CDS 12793 - 13053 239 ## gi|294781879|ref|ZP_06747211.1| hypothetical protein HMPREF0400_02107 - Prom 13076 - 13135 8.0 + Prom 13882 - 13941 5.8 18 8 Op 1 8/0.000 + CDS 13969 - 15630 2908 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 19 8 Op 2 . + CDS 15710 - 16921 1757 ## COG1171 Threonine dehydratase 20 8 Op 3 32/0.000 + CDS 16932 - 18650 2318 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 21 8 Op 4 . + CDS 18640 - 19131 725 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Prom 19186 - 19245 6.4 22 9 Op 1 6/0.000 + CDS 19274 - 20782 2202 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 23 9 Op 2 30/0.000 + CDS 20792 - 22186 1966 ## COG0065 3-isopropylmalate dehydratase large subunit 24 9 Op 3 10/0.000 + CDS 22183 - 22758 784 ## COG0066 3-isopropylmalate dehydratase small subunit 25 9 Op 4 . + CDS 22760 - 23818 1483 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 26 9 Op 5 . + CDS 23827 - 24603 240 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 27 9 Op 6 . + CDS 24628 - 25635 1706 ## COG0059 Ketol-acid reductoisomerase + Term 25704 - 25759 9.3 + Prom 25732 - 25791 12.4 28 10 Tu 1 . + CDS 25823 - 26488 671 ## FN0035 hypothetical protein + Prom 26679 - 26738 8.1 29 11 Tu 1 . + CDS 26917 - 31690 5269 ## FN0033 hypothetical protein Predicted protein(s) >gi|292606605|gb|ADGG01000005.1| GENE 1 235 - 888 716 217 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781863|ref|ZP_06747195.1| ## NR: gi|294781863|ref|ZP_06747195.1| hypothetical protein HMPREF0400_02091 [Fusobacterium sp. 1_1_41FAA] # 1 217 1 217 217 382 100.0 1e-105 MRYEYQGIKLGDSIEKIIDLLNNKNTKLNDAGTNLIYKTGSTIEDISTRIYICLYMGIVV MIKVFDQDFCLVEDLKIGLPITNEIIEKYGLYEDDIAEDEGYYESIKYKKLVINIDWGTG RLKRYNDGIERIIGYTFYEQDKLEFNIRKDEVDNCLECKNLKDIFYSLWKTNTIEVDVDK REIYGQLDNYKFTFDLVTRDIKSIQNLETGEFLKTYN >gi|292606605|gb|ADGG01000005.1| GENE 2 1245 - 1547 430 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781864|ref|ZP_06747196.1| ## NR: gi|294781864|ref|ZP_06747196.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 100 5 104 104 144 100.0 1e-33 MNFLKLKDAANKLLEFMEKYDLNNYNERLVKKFLNELIYVIDTDEIDDVKKYQEVKEIIV GLYPPRGGLTEMYVADEDREKMNKINDELEELKKKITLLD >gi|292606605|gb|ADGG01000005.1| GENE 3 1642 - 2040 485 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781865|ref|ZP_06747197.1| ## NR: gi|294781865|ref|ZP_06747197.1| intracellular protein transporter USO1 [Fusobacterium sp. 1_1_41FAA] # 1 132 1 132 132 186 100.0 6e-46 MICEELKSRKNFIEKDFIELRDSVEGLISVIEKYKDMEKDSDEYITELKEFLEEVNLTLE EKKITDKELKNLNFLRKSYFNSRIDNSIYSYYVYDKNNLEKTHKANDEIEIAKKRFGKIL YKITEKVIYHMI >gi|292606605|gb|ADGG01000005.1| GENE 4 2165 - 2575 609 136 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0275 NR:ns ## KEGG: Lebu_0275 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 134 1 136 136 103 47.0 2e-21 MNKNYVGTYGVIKKNRGIDLIYSETEGEGNIFFSILKCIEENDNYLKVVVIGKSKENTPK IAIIKKEGYEILKKPKFDVGDRVRLIKYPNEKAIVRLIIWHEKDRRIYYILDVEGNKKRS NSWYYEDENKFEKINE >gi|292606605|gb|ADGG01000005.1| GENE 5 2709 - 3020 572 103 aa, chain - ## HITS:1 COG:FN0093 KEGG:ns NR:ns ## COG: FN0093 COG0526 # Protein_GI_number: 19703445 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 1 103 1 103 103 175 90.0 1e-44 MAVIKGTKENFEAEVLKAEGIVVVDFGANWCGPCKSLVPILDEVVEEDPNKKIVKVDIDE EEELAAQYKIMSVPTLLVFRNGEIIDKSVGLIQKHEVKALFSK >gi|292606605|gb|ADGG01000005.1| GENE 6 3190 - 4146 276 318 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 34 290 32 275 285 110 31 8e-24 MENIKEKFEFEVSPEYEGMRLDKYLAEQIEEATRSYLEKLIDNSYVKINSKVINKNGRKL KSGEKIEISIPEEENIDIEAENIPLDIVFENDDFILVNKKYNMVVHPAYGNYNGTLVNAL LYYTNNLSSVNGNIRPGIIHRLDKDTSGLILVAKNNFAHAKLASMFTDKTIHKTYLCIVK GNFSDENLEGRIENLIGRDTKDRKKMAVVKENGKLAISNYRVVEQVKDYSLVEVLIETGR THQIRVHMKSINHPILGDVIYGSEDKNIKRQMLHAFKLEFLNPLDNKEYTFTGKLFDDFI EVAKRLNFNIDKYGGVHG >gi|292606605|gb|ADGG01000005.1| GENE 7 4139 - 4792 796 217 aa, chain + ## HITS:1 COG:FN1371 KEGG:ns NR:ns ## COG: FN1371 COG0164 # Protein_GI_number: 19704706 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Fusobacterium nucleatum # 1 210 7 215 215 298 81.0 4e-81 MDNPLYLYDLEYKNVIGVDEAGRGPLAGPVVAAAVILKQYSEELDEINDSKKLTEKKREK LYDIILNNFNVAVGIASVEEIDKLNILNADFLAMRRALKDLEKFYETKKDYIVLVDGNLK IKEYEGKQFPIVKGDAKSLSIAAASIIAKVTRDRIMKDLGLKYPDYDFEKNKGYGTKKHV EAIKTKGVLKNIHRKVFLRKILDETKDEPKEVQLRIL >gi|292606605|gb|ADGG01000005.1| GENE 8 4813 - 5172 325 119 aa, chain + ## HITS:1 COG:FN1370 KEGG:ns NR:ns ## COG: FN1370 COG0792 # Protein_GI_number: 19704705 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Fusobacterium nucleatum # 1 119 1 119 119 167 81.0 3e-42 MNTREIGNKYEDKSVEILIKNSYKILERNYQNKYGEIDIIAQKDDEIVFVEVKYRKTNKF GYGYEAVDRKKLFKIVKLAQLYMQSKKYEKYKMRFDCMSYLEDELDWIKNIVWGDEIGF >gi|292606605|gb|ADGG01000005.1| GENE 9 5156 - 5380 129 74 aa, chain + ## HITS:1 COG:FN1369 KEGG:ns NR:ns ## COG: FN1369 COG3478 # Protein_GI_number: 19704704 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Fusobacterium nucleatum # 1 74 1 75 75 104 90.0 3e-23 MKLAFSCPKCRCRHCEEKSIILPEKKKNFIKIELNTYYAKTCLNCGYTEFYSAKIVDDET EKKCKDNAEPEGSY >gi|292606605|gb|ADGG01000005.1| GENE 10 5355 - 6002 483 215 aa, chain + ## HITS:1 COG:FN1368 KEGG:ns NR:ns ## COG: FN1368 COG1040 # Protein_GI_number: 19704703 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Fusobacterium nucleatum # 12 213 1 202 204 276 75.0 3e-74 MLNLKEAIKKSLRVLLFDDSCTSCHNILDREGFICSKCLENLKREAYLKNKDNFFYVFIY EKAIRQIIADYKLRNRKDLAKDLAYLIQKPFFQLLEREKIDIIIPVPISDERMLERGFNQ IEYLLELLSVNYKKIQRIKDTKHMYNLKDVKKRAKNVKNVFKNKLNLTNKNVLIVDDVVT SGATIRSICEELEKTNENINIKVFSIAMARHFINN >gi|292606605|gb|ADGG01000005.1| GENE 11 6021 - 6620 621 199 aa, chain + ## HITS:1 COG:no KEGG:FN1367 NR:ns ## KEGG: FN1367 # Name: not_defined # Def: methyl-accepting chemotaxis protein # Organism: F.nucleatum # Pathway: not_defined # 1 199 1 201 201 211 64.0 9e-54 MEVYIDNQKTNFGRRTKDLEKILKAISKKLEKNNKVIENIYINGSSIEEFPFIDMNMKNV MEVTTKSYVDLSLESLNLSKEYIEIFFDINSGFQENIIEKEEISAIEIEETDVFLNWFSD LLYFLITNYSFTFPELEETFETFKGELAILSEFKEKKDYIAYVSTLNYCVSDILETFVAN IDYYQNCILNDEAQKNNLF >gi|292606605|gb|ADGG01000005.1| GENE 12 6635 - 7390 1341 251 aa, chain + ## HITS:1 COG:FN1366 KEGG:ns NR:ns ## COG: FN1366 COG0149 # Protein_GI_number: 19704701 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Fusobacterium nucleatum # 1 251 1 251 251 432 92.0 1e-121 MRRLVIAGNWKMYKNNSEAVATLTELKNLTKDVNNVDIVIGAPFTCLSDAVKAVEGSNVK IAAENVYPKIEGAYTGEISPKMLKDIGVEYVILGHSERREYFKESDEFINQKVKAVLEIG MKPILCIGEKLEEREEGKTLEVLATQIKGGLADLSKEEAVKVIVAYEPVWAIGTGKTATP EMAQETHKEVRNVLAEMFGKEVADKMIIQYGGSMKPENAKDLLSQEDIDGGLVGGASLKA DSFFEIIKAGN >gi|292606605|gb|ADGG01000005.1| GENE 13 7413 - 8507 1671 364 aa, chain + ## HITS:1 COG:FN1365 KEGG:ns NR:ns ## COG: FN1365 COG0012 # Protein_GI_number: 19704700 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Fusobacterium nucleatum # 1 364 1 364 364 641 89.0 0 MIGIGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNVGMVTVPDERLNALAQIINP ERIVPATVEFVDIAGLVKGASKGEGLGNKFLSNIRATSAICQVVRCFDDENVIHVSGQVD PINDIEVINTELIFADIETIEKAIEKHEKLARNKIKESVELMAVLPKVKKHLEEFKLLKT LDLTDEEKQVLKNYQLLTLKPMIFAANVAEDDLATGNKYVDLVKDYAEKIGSEVVIVSAK VEAELQEMDDESKKEFLETLGVKEAGLNRLIRAGFKLLGLQTYFTAGVKEVRAWTIRIGD TAPKAAGEIHTDFEKGFIRAKVVSYDDFIKYSGWKGSQENGVLRLEGKEYIVHDGDLMEF LFNV >gi|292606605|gb|ADGG01000005.1| GENE 14 8604 - 10040 2108 478 aa, chain + ## HITS:1 COG:FN1906 KEGG:ns NR:ns ## COG: FN1906 COG0260 # Protein_GI_number: 19705211 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Fusobacterium nucleatum # 1 478 1 478 478 780 81.0 0 MSFNCVKKVENDYDKYVLVSTTGKINLPDYLDKKSKDLAKAVIEKNEFTAKASEKLAMTL VNNKKVIDFIIVGLGDKAKLDCKNIRQYLFDTLKNETGKVLLSFANEELDNMDIVAEVVE HINYTFDKYISKKKDKFLEVSYLTDKKVPKLIEGYELGKISNIVKDLINEQAEVMTPKAL ADKAVELGKQFGFQAEIMDEKKIQKLGMNAYLGVARAAHHRPYLIVMRYKGDEKSKYTHG LVGKGLTYDTGGLSLKPTDSMLTMRCDMGGAGTMMGVMCAVAKMKVKKNVTCVIAACENS IGPNAYRPGDILTAMNGKTIEITNTDAEGRLTLADALTYIVRKEKVDEVIDAATLTGAVM VALGEDVTGVFTNNDEMAKEIISASNNWNEYFWQMPMFDIFKKNFKSPYADMQNSGTRWG GSTNAAKFLEEFIDDIKWTHLDIAGTAWASGANPYYSQKGATGQVFKTVFSYLKNSKN >gi|292606605|gb|ADGG01000005.1| GENE 15 10126 - 11763 2502 545 aa, chain - ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 1 332 1 332 332 549 91.0 1e-156 MEKIYDMIIIGGGPAGLSAGIYGGRAKLDVLVVEKENKGGQISLTSEVVNYPGILEISGT ELMTQTRKQAEGFGVNFVQGEVVDMDFTKDIKTIKTKDAEYSALSVVIATGAAPRKLGFP GEQEFTGRGVAYCATCDGEFFTGMDIFVIGAGFAAAEEAMFLTKYGKSVTIIAREPDFTC AKSIGDKVKAHPKITTKFNTELIELTGDMKPTAAKFKNNVTGEITEYKAKVGETFGVFVF VGYAPSSQIFKGHIEIGEGGFIPTNEDLMTNVKGVFAVGDIRPKRLRQVVTAVADGAIAA TSIEKYVHDLREELGLKKEEKEEQKTTSIKTEKEQFLDDDLKQQLVTVVDRFENPVEIVV FKNPAIEESLAIEEAVKDIASIAPEKLKFSSYNEGENKELEAKVKVERTPTIAVLDKDGN FSGLKYSSLPSGHELNSFILGLYNVAGPGQKVTPESLEKIEKIDKPVNIKIGISLSCTKC PKTVQATQRIATLNKNIEMEMINIFTFQDFKNRYDIMSVPAIIVDDQHVYFGEKTVEDML EIINK >gi|292606605|gb|ADGG01000005.1| GENE 16 11872 - 12438 1008 188 aa, chain - ## HITS:1 COG:FN1983 KEGG:ns NR:ns ## COG: FN1983 COG0450 # Protein_GI_number: 19705279 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Fusobacterium nucleatum # 1 188 1 188 188 367 96.0 1e-102 MSLIGKKVPEFKAQAFKKGEKDFITVTDKDLQGKWSVFVFYPADFTFVCPTELEDLQDNY AAFQKEGAEVYSVSCDTAFVHKAWADHSERIKKVTYPMIADPTGFLARAFEVMIEEEGLA LRGSFVINPEGKIVAYEVHDNGIGREAKELLRKLQGAKFVAEHGEVCPAKWQPGSETLKP SLDLIGEL >gi|292606605|gb|ADGG01000005.1| GENE 17 12793 - 13053 239 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781879|ref|ZP_06747211.1| ## NR: gi|294781879|ref|ZP_06747211.1| hypothetical protein HMPREF0400_02107 [Fusobacterium sp. 1_1_41FAA] # 1 86 1 86 86 119 100.0 6e-26 MNNNQKNTNYLYIIKRHPIFLSVLICTILFFTFLFFCLPPGWLVLGFLHNLYVNGGILGK IIFYFIVVSYLLLLFIIPADFIKENE >gi|292606605|gb|ADGG01000005.1| GENE 18 13969 - 15630 2908 553 aa, chain + ## HITS:1 COG:PAB0895 KEGG:ns NR:ns ## COG: PAB0895 COG0129 # Protein_GI_number: 14521553 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Pyrococcus abyssi # 3 553 2 551 551 660 59.0 0 MSRSNNLTEGAARAPHRSLLKGLGFVAEEMDRPIIGIANSFNEIIPGHVHLQTLVQAVKD GIRNAGGVPMEFNTIGICDGLAMNHLGMKYSLVTRQLIADSVEAVAMATPFDAIVFIPNC DKVVPGMLMAAARLNVPSIFISGGAMLAGVYKGKKVGLSNVFEAVGQYEAGLITRKELNT VEDLACPTCGSCAGMYTANTMNCLTEALGMGLPGNGTVPAVFSERLRLAKKAGMQILEIL KADLRPSDIMTKKAFENAVAVDMALGGSSNTALHLPAIAHEAGVDLTLDDFNDIAKKTPQ LCKLSPSGEYFIEDLYRAGGVTGVMKRLYENGRLNADEKTVALRTQGELAKDAYINDDDV IKPWDKPAYTTGGIAVLKGNLAEDGCVVKEGAVDKEMLVHSGPAKVFNSEEETIKAMREK KIVAGDVVVIRYEGPKGGPGMREMLAPTATIAGMGLGKDVALITDGRFSGATRGASIGHV SPEAAAGGTIAIVQDGDIIEIDIPNRKINVKLSDEEIARRKAELKPYEPNVKGYLKRYAA HVSSAAAGAIYVE >gi|292606605|gb|ADGG01000005.1| GENE 19 15710 - 16921 1757 403 aa, chain + ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 1 398 1 398 404 521 73.0 1e-147 MHKLYNFIEARERLTTVVVKTKLMHSPVFSEESGNEIYLKPENLQKTGSFKIRGAYNKIA KLTDEEKKKGVIASSAGNHAQGVAYAAKRLGIKAVIVMPKHTPLIKVEATRKYGAEVVLH GEVYDDAYKKALELQKENGYVFVHPFNDEDVIEGQGTIALEILDELPDADIILVPLGGGG LVSGIASAAKLKNPQVKVIGVEPEGAASAIAALEKGKVVELAEANTIADGTAVKRIGEKN FEYIKKYVDDIVTVSDYELMEAFLLLVEKHKLVAENSGILPVAAAKKLNIKGKKIVAVLS GGNIDVLTISSMINKGLIMRGRIFTFSVQLADKPGQLLKVSEILAKQNANVIKLEHNQFK NLSRFKDVELQVTVETNGEEHISKIAEAFKKEGYEIVRENPPM >gi|292606605|gb|ADGG01000005.1| GENE 20 16932 - 18650 2318 572 aa, chain + ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 563 5 559 564 605 51.0 1e-173 MANEMIKGARILLECLSRLGIKEIFGYPGGAVIPIYDELYSFKDIKHYFARHEQGAVHEA DGYARSTGKVGVCLATSGPGATNLVTGIMTAHMDSIPLLAITGQVTSTLLGKDAFQESDI VGITVPITKNNYLVQDIRELPRILKEAYYIASTGRPGPVLVDIPRDIQLEEIPFDEFKKL YEQEFELEGYNPVYEGHKGQIKTAIKMIKDSKKPLIIAGAGILKGHAYDELKEFVDKTNI PVAMTLLGLGSFPANHELALGMIGMHGTTYANYAANEADLVIAAGMRFDDRVTGNPQKFL PNAKIIHIDIDPAEIGKNKLIDVPIVGDLKNVLAELNEKVPKLSHTKWLDEVAKLKKKYS LTFRKTEEDVLIPQEILFEINKLTKGEVIVATDVGQHQMWSAQFIKFNNPYSILTSGGAG TMGFGLPAAIGAQVANPDKKVLAIVGDGGFQMTFQELMMVKEYNLPVKIFIINNSYLGMV RQWQELFNDRRYSSVNLSYNPDFIKIGEAYGIKSIQLKTKKDLKKHLKKILESDEAVLVE CIVEKEENVYPMIPAGKDVSCIVGKRGVLDAE >gi|292606605|gb|ADGG01000005.1| GENE 21 18640 - 19131 725 163 aa, chain + ## HITS:1 COG:MA3791 KEGG:ns NR:ns ## COG: MA3791 COG0440 # Protein_GI_number: 20092587 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Methanosarcina acetivorans str.C2A # 5 162 2 159 161 133 43.0 2e-31 MLNKEHQILIIAKNTNGIVARIMSLFNRRGYFVKKMSAGVTNKEGYARLTLTVDGDKESL DQIQKQVYKIIDVVKVKIFPEKDVIRRELMLLKVKADEETRSQIVQIANIYRGNILDVSP KSLVIELTGDIEKLRGFIGMMSNYGILEIAKTGIVAMSRGEKM >gi|292606605|gb|ADGG01000005.1| GENE 22 19274 - 20782 2202 502 aa, chain + ## HITS:1 COG:aq_2090 KEGG:ns NR:ns ## COG: aq_2090 COG0119 # Protein_GI_number: 15607049 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Aquifex aeolicus # 4 497 9 504 524 483 51.0 1e-136 MKCIKIFDTTLRDGEQTPRVNLNAKEKLRIAKQLEALGVDVIEAGFAAASPGDFEAIELI AQNIKNSTVTSLARAVKSDIEMAAKAIKKANKARIHTFIATSPIHREFKLKMSKEEILKT VDEMVRYARTFTNDIEFSAEDAMRTEKEYLVEVYETAIKAGATTINIPDTVGYRTPQEMY DTVKYLKENIKGIENIDISVHCHNDLGLAVANSIAAVQAGATQIECTINGIGERAGNTSL EEVVMLFKTRKDLFADFTTNIDTKQIYPTSKLVSLLTGVTTQPNKAIVGANAFSHESGIH QHGVLANPETYEIIKPEVVGRNVDSLVLGKLSGKHAFVDKLNSLGFSGFDDKKIEELFAN FKNLADKKKYVLDEDIISLISGDAAEVKGRFSLEHFEIIRTDIKAKAEIIMYVDGEKDVS SSYGSGPVDAAYKAINRLLNDNFILEEYKLESITGDTDAQAQVVVIIEKDNKRHIGRAQS TDIVESSIKAYINALNRLYKED >gi|292606605|gb|ADGG01000005.1| GENE 23 20792 - 22186 1966 464 aa, chain + ## HITS:1 COG:lin2096 KEGG:ns NR:ns ## COG: lin2096 COG0065 # Protein_GI_number: 16801162 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Listeria innocua # 2 457 3 454 462 665 69.0 0 MKTLFDKVWEKHVIIGNEGEAQLLYIDLHLIHEVTSPQAFSGLRIAGRRVRRPDLTFGTM DHNTPTIMADRYNIADETSKTQLEALKRNCEEFGVQLADMFNERNGIVHMVGPELGLTLP GKTVVCGDSHTATHGAFGAIAFGIGTSEVEHVLATQTLWQKKPKTMGIEITGKLQKGVYA KDIILHLIKTYGIGLGNGYAFEFFGDTIKSLSMEERMTICNMAIEAGGKSGIIAPDEITF EYIKGREFSPKDEELEKKIKEWKELYTDDVSAFDEYIKLDISNLVPQVTWGTNPEMGMNI TDTFPEIKDLNYEKAYKYMDLKPGDSPKNINLKYIFIGSCTNGRLSDLEVVAKIVKGKKV HPNIKAVIVPGSQMVKKQAEEKGFAKIFLDAGFEWREAGCSTCLGMNPDLIPGGEHCAST SNRNFEGRQGKGARTHLVSPAMAAAAAIHGHFIDVRELEEVQDS >gi|292606605|gb|ADGG01000005.1| GENE 24 22183 - 22758 784 191 aa, chain + ## HITS:1 COG:SA1865 KEGG:ns NR:ns ## COG: SA1865 COG0066 # Protein_GI_number: 15927635 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Staphylococcus aureus N315 # 1 188 4 188 190 226 57.0 2e-59 MKPFIKFEGTIVPIMNDNIDTDQLIPKQYLKSTEKTGFGKYLFDEWRYNEDGSDNLDFNL NKSEYKKGTILITGDNFGCGSSREHAAWALQDYGFHVIVAGGYSGIFYMNWLNNGHLPIT LPKEDRDELSKLPGDAVITVDLENNKLSANGKDYFFNLEESWKERLLKGLDSIGLTLQYE DKIKEYEKVGR >gi|292606605|gb|ADGG01000005.1| GENE 25 22760 - 23818 1483 352 aa, chain + ## HITS:1 COG:PA3118 KEGG:ns NR:ns ## COG: PA3118 COG0473 # Protein_GI_number: 15598314 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Pseudomonas aeruginosa # 1 349 1 354 360 426 59.0 1e-119 MEYKIAVLKGDGIGPEIVDVTTKVLEKIGEKFNHKFIFTRGYLGGESIDKYGVPLSDETI EICKNSDAVLLEAVGGPKWDKIEAELRPEKGLLKIRKELEVFTNLRPAILFNELKNASPL KEEIIGDGLDIMVVRELTGGLYFGPKKYSEEEASDTLVYKREEIERITKKAFEIAKLRSK KLTSVDKQNVLDSSKLWRKIVNEISQDYPEVKVDHMYVDNAAMQLVINPRQFDVILTENT FGDILSDEASMLTGSIGMLPSASLGYGKVGIYEPCHGSAPDIAGQNIANPIATILSAAMM LRYSFNLNVEADTIEKAIEEVLKDGYRTADIYSEGYKKVGTIEIGEEIINRI >gi|292606605|gb|ADGG01000005.1| GENE 26 23827 - 24603 240 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 14 221 15 214 311 97 33 1e-19 MEKILSYKNVSFRRDDREILKNINWEIKKGENWALLGLNGSGKSTLLSMIPAYTFATSGE VSVFEKKFGTCVWAEVKEKVGFVSSSLNTFSDSLNNQTLNNIVLSGKYNSIGIYQEITQK DREKANNIIKDFKLSHLKLNKYITLSQGEQRKTLLARAFMNEPSLLILDEPCSGLDIRAR EIFLKTLEESKSKIPFIYVTHQIEEIIPSITHVAILDNGEIVSQGNKFEVLTEENLSKLY GIDLKIEWSNNRPWLIVK >gi|292606605|gb|ADGG01000005.1| GENE 27 24628 - 25635 1706 335 aa, chain + ## HITS:1 COG:RSc2075 KEGG:ns NR:ns ## COG: RSc2075 COG0059 # Protein_GI_number: 17546794 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Ralstonia solanacearum # 10 334 3 327 338 418 60.0 1e-117 MAGNILGTTVYYDADCNLQKLVGKKITVLGYGSQGHAHALNLKENGMDVTIGLRKDSKTW SVAEEAGFVVKETGEAVKDADVVMVLIPDEIQGDTYTNSIAPNLKKGAYLGFGHGFNIHF KKIQPREDVNVFMVAPKGPGHLVRRTFQEGSGVPCLIAVYQDSSGDTKDVALAWASGIGG GRSGILETTFKQETETDLFGEQAVLCGGITELIKTGFEVLTEAGYDPVNAYFECLHEMKL IVDLIYEGGLAKMRHSISNTAEYGDFLTGPKIVTADTKKAMKEVLADIQSGKFADEFLAD SKAGQPFLKAHRKAASEHQLEKVGQELRQLMSWIK >gi|292606605|gb|ADGG01000005.1| GENE 28 25823 - 26488 671 221 aa, chain + ## HITS:1 COG:no KEGG:FN0035 NR:ns ## KEGG: FN0035 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 220 1 217 220 231 64.0 1e-59 MKRFPLKFMLIFILSLFSSFTYADGVFSKYYNGRFNYIINVPTTKYENGVGGTENLNFVK NSNLIPTKNFFSAYEGANSDGLTIQDINGNIIILAYGSYFLNSEEVNGLSRETIRNSFEY DRLNYNLFLRKYYNGNLPKNIEPLKYDYNKNLFIYGENVAYNTIGKNFYVISYIEENKIV YKKVIYSKDSNAYIVFQASYLPKDKKFMDKLVVEMVNSIKY >gi|292606605|gb|ADGG01000005.1| GENE 29 26917 - 31690 5269 1591 aa, chain + ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 114 1591 1 1477 1607 1974 75.0 0 MLIFYRKSLEENVEKFVENIKKASKNLDKESQKFIEDIFLEEKDELRYGYGIYLKDTIKK EFSSKKDVKLNDIFPKNIYPAMELLVGKKFLKIFLEISKNATKYSFSRGYSRRMVRSSSY YNYIDFLFDLFTDLVDLNFLNLDILTIVKGEYDNDGIYGLHNPYLIAYEIDNGNKELIDL IKGALGSQKSKIDLNYFIMQAIFISNNKELLELTGKLLLAAKLQEGVRQEICENMDRGLQ ENFEYMFKIIYDNNLIRFSSVKRALATWTGLTRDENADISKFGKKELEIINNLIANPKYE DELLKSDDNVEVYLALWNKSARDIKEAVEAMEKLLKSSKYHIKLLISYFLDVIQDIKYQR EIAKKVIKEYDDTKEIIEILACYLNFVITYGSASDLKENLKNRKIVPETFFKNKKEALEF FDILEKALVLMAGKDKVFNPCIFPWFYQSISTHTVATAMGLIAAFYPDDALKNRMMKHLK EINTWNRGYYLDVLFEKTSNKEEKDFVISMLSDRTNAGVVAYEIAKNNNLVKEYSKDIED FLRLKNGDTRKNSINLLMEQDKKGLLASIDNLISAKNENKRLAALDILNQVNSKEKALYD KKEVKKLIEKIAKPTDAEKILIENLSDKKKKESEDTLSKLYDVNYKVNLAYEVKKVEKVS KTVKKNKKDEYIIEISSEPKNFFSKTTDELFEIVKKLSELYIENEDYEYMSFHYNEYVLL RDKFSIIKNMDNILYGDEKKLTNYPLEDIWKDFYKKEIKDFPTLLQLYLLLMMGVEGRAR RVLTDAQKDIYMKMLGFDVMDLSNKLKKANLKYVFSRIPYDPEDYDPTGHVIKIISLLFE YYSEENKKYLFEFAKIFSLYILENIDAKYRLEEKKDYRDKTYYNIIFNAVSYTYSNLYYI PIKALKYLEDYYDEKSFTDAFLIRYHLDEKLNKYIDENLKGYKIDGNKRDLGLRNYAIAI RLNMIEKDFLYQNILNLDDIEEIEENLGSLNFFMHENKKLFNLNPFMLTEALEILYDEGI KIIDYLVQNELKRGDSPTKYSKAIYRIKRIEGIDYLVQILQALGKETLDRNSFYHNFSYY WSGTDKKREVLSHLLKVCHPSEKDNSKELAKKLKGTDITEQRLIEVAMYSSQWIEIIEGY LGWKGLASGCYYFQAHMSDISEKKEGLIAKYTPIPIEDLKEGAFDIDWFKSAYKELGEKK FEMLYDSAKYISDGAKHSRARMFADAVNGKLNLKETEKKIEDKRNKDLVASYSLIPLLKD KKKDALHRYQFLQKFLKESKKFGAQRRASEAKAVSISLENLSHNMGYSDVTRLIWNMETA LINEMKEYFVPKKLDDVDVYIKIDDLGQSEIIYEKAGKELKSLPTKLKKDKYIEDIKEVH KNLKEQYRRSRKMLEEAMEDATEFYGYEIENLMTNPVISPILKSLVFKMGNDLGYYEDKK LKSVNKKAIAIKDDSLLKIAHCFDLFESGDWASYQKDIFDRELKQPFKQVFRELYVKTVD EKGRDKSLRYAGHQVQPTKTVALLKTRRWIIDGQEGLEKVYYKKNIIAKIFALADWFSPA DIEAPTLEEVQFFDRKTFKPILIDNVPDLVF Prediction of potential genes in microbial genomes Time: Thu May 19 21:18:54 2011 Seq name: gi|292606604|gb|ADGG01000006.1| Fusobacterium sp. 1_1_41FAA cont1.6, whole genome shotgun sequence Length of sequence - 5140 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 8.2 1 1 Tu 1 . + CDS 296 - 5138 5620 ## FN0033 hypothetical protein Predicted protein(s) >gi|292606604|gb|ADGG01000006.1| GENE 1 296 - 5138 5620 1614 aa, chain + ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 117 1614 1 1501 1607 2092 78.0 0 MLSFSNHEYNEKAKEYIEEIKNSSKALNKESQDFIKTLFDLGNARYYSSFYGYVDIFSEQ TSEKLKTKNEVKLDDIFPESLYPAMELLIGEKFFKIFMAIAKNITKTPFSVGYFRRMVRS KNYFNYISILITLFKKFIDLHFLDIDALKILKKDYEKGLYNLDNNPYYIAYEIDNGNQEV IDLIKSALSSQKSEIDLTYYIFQAIFISSNKELVELTGKLLLAAKLQEGVRQQICKNMDR GIQENFEYMFKIIYDNDLIRFSSVKRSLATWTGLAKNDGTDISKIGKKELEIINKLITNP KYEDELLKSDDNIEVYLALWNKSTRDVKEAVETIEKLLKSSKYHIKLLISYYLHIIENKD YQREIAKKMIKEYSKDNKNIVEILACYFQFIINYIVGHKLKSDIEKGQIKAENYFKNKKE ALEFFDILENALSLITEKRKVFSPCIFPWNSEFIDTDILAKTLGLIAIFYPDDTLKAKVM KYIKEIDAWERQYFFEILFEKPNNKEEKDFVIATLSDRSGAGDAAYEIVKNNDLLKEYPR EIEDLLRLKNGDKRKSFIDLLMTQDKKALLVSIDNLISAKNENKRLAALDILNQVNSKEK ALYDKKEVKKLIEKISKPTDAEKILIENLSDKKKKESEDSLNKLYNTEYDLELAYEIKEV SKLSKTIKKNKKAEYIIENIFNPKKIFSKTSNELFEIIKKLSELYIKNENYEYMSSYEKE YVLLRDKFQILEDLMGVSYAERFKLSNYPLEDVWREFYKKEIKDFSVLWQINIALSVDYD SGYSKATEKEYQDLYKKVFGIDITELKKKLKEAKLRYVYTIDLYSGPVLKILDMLYKEYY EENKSYLFEIGKVCINSALENIKIEDIIEKREKYNNDPYYSVAMFNRNSGLYTLFAKSID YLEFYNDEKAFIESFVLRYVLDEKINKYIDENLKGCEISGGTKSLGLRNYAIAVNLKIAE KDLMYKKILEIEDKSDDEKRITFSNLDTYMNDYRTIVDKKENRRIPTLNQFMLNDALKII YDEGIKILDYVVKNELKRGDSPTIYSRSLNRIYRIEGIDYLVQILQALGKETFDRNSYYW GGNDTKKSVLSHLLKACYPSEKDNSKELAKKLKGTDITEQRLIEVAMYSSQWIEIIEGYL GWKGLASGCYYFQAHMSDIDRNKEGLIAKYTPISIDDLMEGAFDIDWFKSAYKELGEKKF EMLYDSAKYISDGAKHSRARMFADAVNGKLNLKETEKKIEDKRNKDLVASYSLIPLLKDK QKDALHRYQFLQKFLKESKKFGAQRRASEAKAVSISLENLSRNMGYSDVTRLIWNMETAL INEMKEYFVPKKLDDVDVYIKIDELGQSEIIYEKAGKELKSLPTKLKKDKYIEDIKEVHK NLKEQYRRSRKMLEEAMEDGTEFYGYEIENLMTNPVIAPILKSLVFKMDKNLGYYEDKKL KSAKKKSVAIKDDSLLKIAHCFDLFESGDWASYQKDIFDRELKQPFKQVFRELYVKTVDE KGRDKSLRYAGHQVQPAKTVALLKTRRWIIDGQEGLEKVYYKENIIAKIFALADWFSPAD IEAPTLEEVQFFDRKTFKPILIDNVPDLVFTEVMRDIDLVVSVAHIGDVDPEAS Prediction of potential genes in microbial genomes Time: Thu May 19 21:19:25 2011 Seq name: gi|292606603|gb|ADGG01000007.1| Fusobacterium sp. 1_1_41FAA cont1.7, whole genome shotgun sequence Length of sequence - 37043 bp Number of predicted genes - 33, with homology - 33 Number of transcription units - 15, operones - 6 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 64 - 252 147 ## FN0033 hypothetical protein + Term 306 - 338 1.1 2 2 Tu 1 . - CDS 351 - 596 332 ## COG2261 Predicted membrane protein - Prom 620 - 679 12.3 + Prom 593 - 652 11.2 3 3 Tu 1 . + CDS 765 - 1640 1110 ## FN0031 hypothetical protein + Term 1645 - 1685 9.4 - Term 1633 - 1673 9.4 4 4 Op 1 . - CDS 1689 - 5456 4705 ## COG3468 Type V secretory pathway, adhesin AidA 5 4 Op 2 . - CDS 5466 - 7964 3158 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Term 8208 - 8252 12.0 6 5 Tu 1 . - CDS 8278 - 8844 664 ## gi|294781897|ref|ZP_06747229.1| conserved hypothetical protein - Prom 9023 - 9082 11.5 + Prom 8882 - 8941 8.3 7 6 Op 1 . + CDS 9048 - 9596 699 ## COG0526 Thiol-disulfide isomerase and thioredoxins 8 6 Op 2 . + CDS 9608 - 10426 894 ## COG2849 Uncharacterized protein conserved in bacteria + Term 10446 - 10476 1.2 - Term 10421 - 10473 8.9 9 7 Tu 1 . - CDS 10474 - 11187 1121 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 11281 - 11340 11.9 + Prom 11290 - 11349 10.4 10 8 Tu 1 . + CDS 11375 - 12355 1539 ## COG3181 Uncharacterized protein conserved in bacteria + Term 12387 - 12449 1.2 + Prom 12373 - 12432 8.9 11 9 Op 1 . + CDS 12472 - 12912 415 ## FN2104 hypothetical protein 12 9 Op 2 . + CDS 12933 - 14423 2205 ## COG3333 Uncharacterized protein conserved in bacteria + Term 14432 - 14465 2.4 13 10 Tu 1 . + CDS 14490 - 15221 951 ## COG1262 Uncharacterized conserved protein + Prom 15233 - 15292 11.0 14 11 Tu 1 . + CDS 15441 - 17030 2287 ## COG1288 Predicted membrane protein + Term 17050 - 17102 10.6 - Term 17037 - 17090 7.0 15 12 Op 1 1/0.000 - CDS 17095 - 18936 1478 ## COG1835 Predicted acyltransferases - Prom 19048 - 19107 7.7 - Term 19040 - 19085 4.1 16 12 Op 2 1/0.000 - CDS 19116 - 21134 3100 ## COG3808 Inorganic pyrophosphatase 17 12 Op 3 . - CDS 21210 - 22226 1032 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 18 12 Op 4 . - CDS 22210 - 22431 378 ## FN2032 DNA-directed RNA polymerase omega chain (EC:2.7.7.6) 19 12 Op 5 8/0.000 - CDS 22432 - 22989 895 ## COG0194 Guanylate kinase 20 12 Op 6 1/0.000 - CDS 23001 - 23879 1033 ## COG1561 Uncharacterized stress-induced protein - Prom 23899 - 23958 5.0 21 12 Op 7 13/0.000 - CDS 24082 - 26409 3012 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 22 12 Op 8 58/0.000 - CDS 26475 - 28043 1806 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 23 12 Op 9 28/0.000 - CDS 28079 - 31639 844 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 31794 - 31853 5.6 - Term 31823 - 31859 4.2 24 13 Op 1 47/0.000 - CDS 31888 - 32253 570 ## PROTEIN SUPPORTED gi|237738814|ref|ZP_04569295.1| LSU ribosomal protein L12P 25 13 Op 2 43/0.000 - CDS 32302 - 32814 805 ## PROTEIN SUPPORTED gi|237738813|ref|ZP_04569294.1| LSU ribosomal protein L10P - Prom 32835 - 32894 2.5 - Term 32836 - 32867 0.1 26 13 Op 3 55/0.000 - CDS 32967 - 33674 1184 ## PROTEIN SUPPORTED gi|237738812|ref|ZP_04569293.1| LSU ribosomal protein L1P 27 13 Op 4 45/0.000 - CDS 33736 - 34161 701 ## PROTEIN SUPPORTED gi|237738811|ref|ZP_04569292.1| LSU ribosomal protein L11P 28 13 Op 5 46/0.000 - CDS 34195 - 34776 778 ## COG0250 Transcription antiterminator 29 13 Op 6 18/0.000 - CDS 34773 - 34949 244 ## COG0690 Preprotein translocase subunit SecE - TRNA 34979 - 35054 87.4 # Trp CCA 0 0 30 13 Op 7 . - CDS 35082 - 35234 266 ## PROTEIN SUPPORTED gi|19705334|ref|NP_602829.1| 50S ribosomal protein L33P - Prom 35309 - 35368 5.0 - Term 35335 - 35374 -0.5 31 14 Op 1 . - CDS 35503 - 36096 617 ## ACIAD0919 hypothetical protein 32 14 Op 2 . - CDS 36130 - 36558 509 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 33 15 Tu 1 . - CDS 36715 - 37029 376 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606603|gb|ADGG01000007.1| GENE 1 64 - 252 147 62 aa, chain + ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 62 1548 1607 1607 110 91.0 2e-23 MDLFIKKAGSAINVLPVHSQHRGRVFLPFIDDDPKTAEIMAKVILFAQDEKIKDVFILEQ IK >gi|292606603|gb|ADGG01000007.1| GENE 2 351 - 596 332 81 aa, chain - ## HITS:1 COG:BMEI1501 KEGG:ns NR:ns ## COG: BMEI1501 COG2261 # Protein_GI_number: 17987784 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 1 79 1 79 86 62 44.0 2e-10 MGVIAWLVLGALSGWLANKLMKNSSTGLIDNIITGIIGSFIGGFVFNFFGAKTITGLNLH SIFVSVVGACILLWIINKIRR >gi|292606603|gb|ADGG01000007.1| GENE 3 765 - 1640 1110 291 aa, chain + ## HITS:1 COG:no KEGG:FN0031 NR:ns ## KEGG: FN0031 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 289 2 263 271 384 78.0 1e-105 MKKFLFLLLSAFFISNTLFATTNYKHIFYLDNPTDKNIKITLDSKVYNLKPKTYEILNLK RGEHIAELSDGTKVYFKVFANSKGGIINPSGATYTINYFRYQSPRISVDWREPEDTVLPT YNDFIMDKNYITWEYDIFEEVTRESMPKKLHPDVDIHVFTKIYSPSEIKEPDYTKGKAIE VYNFKKSDIDMENPKANLPKLDSDYNIPNNDDEAFQNYIKQIIALDKAYMNTNDAKKQEK ILKEYDKIAKIIWSKYSKSNIVEGSYDKVSLKKLNLKSLDRGVIITKIESK >gi|292606603|gb|ADGG01000007.1| GENE 4 1689 - 5456 4705 1255 aa, chain - ## HITS:1 COG:ycgV_2 KEGG:ns NR:ns ## COG: ycgV_2 COG3468 # Protein_GI_number: 16129165 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 991 1255 140 413 413 86 27.0 4e-16 MSKKLTMLAIFLISLSSYSEIRIKENDIYKDSLKNQSNIRLVGDPVHTGYGVKTGVIFDF MKKSEDTKTQPDIITNKNISLKDAKFALIGDISNYPNSHRVGIVENSKITFEKGKDYNIK DNPSSEFGNTMEIKFGKVILKNSQIIDEDKATNIEIYNDPNGPEYGGELFAQKNPKNLTG LSIERDLLTAHGVYDLKLNGDIKLAITTVNPSNQRGPSLYYGEGATPVLKFGKNTRSKFR SLEAFAMPGFDAKGMVYGDVRDEHVIFDEGSEVEMQDFSAASVNVRFNGGKVKIHSTVNY LNYETKIFENTASIVKGKAVFDLKGGSIENAESANFFTASDRSESLAHHLIDLEMLPESK VDVGMILNGNDYDNEDPAKIMTTTLKPEEDRAPFRLQFDNNTKLYLKYVNEADLTMKQGS HLYMYREGEENQKLSSTNKPNQVEMRGKLKLENTNLHFRINMKEQLSDKMIVENNTISGT GGTIYVKNSGSTDTNGREKVVLIQAKKGVDSGVKFKLANNVEIGAYEYVLDNSLVGSGRD YYLIGEKAHIIPDVPSNVKNDVPTLLKPGNIKTQKGVSGNSINLQNSNLEISPINSKTYT AELTGGNINLTNSTLLVEEGRGLKLKNTPITIKDSAMLINTKDTNSGVKIDAETSTGTIL KVERTSANANANHRDLFVNGTFKVIGNKTSPNAITLGKNTVTQIYNPKGDTALDLRNTSM KIEDGAKLYLDGKRALNSKNSNISGKGVFHIKGDMIHEGDNGVNLTLENGSFIESSSIQF DESNVGSSLRFKAGSELRLNNLSNAKMTFDKGSRVYLYTSEQEAEEIKKEGTDKNIAKIK NNANTITFTGEVEMNDVDIYTRVNLKDNLGDNIVIDGDKGLLKGKGATLHLRNTGSLEVD NISRSIRFFTGKLANGFTWKIAHPLEVGAYVYDTTLSQIKDEKGITRVIFNLQEKRRRKA KLTSTAMGFMENTYADYFQELGTVDEVFKGMNDIEFSKKDSVWAKVGGTTLETKEGFKSN AKSVFVGFDRQLGQVEDLHAGIFVGNTSSSKKYDVYNGDGKSEIFHGGLYLSYRNMLGNG DFILKYSKGKTEYGVLDTVGDKISNKYDYSSKMAAFRFGRKFYPFSKENLYIEPAIQVSY GEIDNINSTASNGLKTRVKTIRTWTTGGDVKLGFKKNNLNTYVKAGISKEFLGDTDFLFN TQGDERKQVDNGIVTLGAGLEYRIGEHSVSVEVVRKESNLLKDFYQASIGYQYKF >gi|292606603|gb|ADGG01000007.1| GENE 5 5466 - 7964 3158 832 aa, chain - ## HITS:1 COG:FN0499 KEGG:ns NR:ns ## COG: FN0499 COG1629 # Protein_GI_number: 19703834 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 12 374 4 370 743 221 37.0 5e-57 MSKKILLLTAFLIGSAILKAEDTIELGTTNVKAKGFYRSQMKENSGKVIITQEEIQKKDY ASVSSIFEDAPVTVVHHTAFGPVVDLRGSGERTISRVKVMLNGVPINPLEESMGSIPFDA IPIDSIGAVEITPGSGTTLYGGGTTGGVINIITKSNKQNDYIVLNAGGSSYSTYTAGGAG GINITENLFMNVGEYYRNGKGYRDGEKTERTNFLGGFDYQMTPNQRIRLQTNLYRDNIDS STELKKVDLEKDRTAAGEKTRTEIDRRGYSLDYINTPTDNLKFTLNLNGAEFDRDVYQHG KQDLFVFPQVMHDFYIGKARLAVRNTETDLKGTFDEKVRGLKVQGEWKYKDKKAKLIFGY EYKKHELDREADMQQAEYFYKDMGLVPIGNQESAVQEGRKHQFESWRDHFAYDAYGKAIE GKNYTEAQKKAILKEQKERADILIGQVLGDTKTASHIISGSRVDKETHALYLLNEYPLTD KLVFKAGARWEHSTYGGTRYNDVKVLFSDISGAFQSALAWGFDISDEEQKGMMNGTVTSL EKDVSYKTMNTRASSDDFGGEVGFTYQYSPKTSFYFRYERGFVSPSPSQLTNRDFLTGVY YPSNVKSEKVDTLEVGTKQFVGNNSFFAATIFASITHDEITLIDYNGNNPMNKRWAYTNL AETNRYGIELQGQHWFGKLKIRESFTYINARIGKDSAYRDYLHSQYSQLDPNSYQNKVVP YKKGDKVPLVSDIKITFGADYQWTPSFTTGATYTYVSGYEMKAPQESFEISSFKTKGYGV LDIYGKYNISENASVRFGVNNVLGEKYNLREDSKYAVPAPERSYFIGLNYRF >gi|292606603|gb|ADGG01000007.1| GENE 6 8278 - 8844 664 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781897|ref|ZP_06747229.1| ## NR: gi|294781897|ref|ZP_06747229.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 188 1 188 188 344 100.0 1e-93 MVTRKILESKNILKKTFVFLVLSASFLSLNSQDTFAEVAGDQKEITSKLVRNVKEVEYDR YYKGDFYSDVGAYPEGMFLVVEKLIENYIAFAHMGDASYLAPVGQRFEEKIEGQTIKRYI AVSQKKKEGYYCIDIYNNVNDQPIATLTAGLKIEKKKNGYLISPKNDLKIVYKGKTYKNQ SALNFLGF >gi|292606603|gb|ADGG01000007.1| GENE 7 9048 - 9596 699 182 aa, chain + ## HITS:1 COG:FN1123 KEGG:ns NR:ns ## COG: FN1123 COG0526 # Protein_GI_number: 19704458 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 25 178 1 154 157 263 88.0 2e-70 MKKIIFILLLSILSLTSFAIPLNNMDKAGNVTLPNIELVDQYGKKHNLQDYKGKVIMINF WVSWCSDCKEEMPKVVELYKEYGENKKDLIILGVASPISKKYPNNKDRIGKKELLKYIAD NKYIFPSLIDETGKTFAEYEIEEYPSTFIINENGHLRAYIKGAISKEELKQNIDKVLNSI QK >gi|292606603|gb|ADGG01000007.1| GENE 8 9608 - 10426 894 272 aa, chain + ## HITS:1 COG:FN0774 KEGG:ns NR:ns ## COG: FN0774 COG2849 # Protein_GI_number: 19704109 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 26 264 3 243 248 162 40.0 9e-40 MKRFLILLFSLFSIFTYGANSVNEVEVNKYIREKLDRDKTITFTTKLNKTNNTLEGYSDE GVLCAITPLDKQPDMINLLQVKSTISEKNGKLKPVYEIRNNNNQLLVRSEYDLNKPINIF KTELFLAYFHGQVPFNSEVEDLIKSINSIKSEINYLDTNSKGYQNYVINHKTNKIRIEDK TTGPLVVTNFDIKTLNGTREFYHDNGKLKISHSLKNGVPNGEFKGYYENGKLLVKATLVN GDFSGVVTEYNEDGSIAGTYDAKDFDLDDLAK >gi|292606603|gb|ADGG01000007.1| GENE 9 10474 - 11187 1121 237 aa, chain - ## HITS:1 COG:FN2118 KEGG:ns NR:ns ## COG: FN2118 COG2849 # Protein_GI_number: 19705408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 237 1 245 245 204 51.0 1e-52 MKKLLIGLFLVSSVLAFSQRVVKGSQAYDEKGVVYIQGEKTPYTGVLQNINEKGILESEA EYKDGKMNGFSKLYYPNGKLQSEATFKDNVQDRLQKDYFEDGKVKLEIPYKNGKVEGTAK EFYPNGKLFVEATYKNGIKDGYEKSYYETGALQSEKIIKNGKMDGFSKLYYPNGKLGSEA TFKADVQVGVQKDYYESGKLKAEVPYKNGKVDGVAKAYDETGKVIEQATFKNGEQVK >gi|292606603|gb|ADGG01000007.1| GENE 10 11375 - 12355 1539 326 aa, chain + ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 18 325 1 307 308 561 94.0 1e-160 MKKKFLAVLTLLLSLLLVACGGEKKTAEANPDAYPEKPVNVIIAYKAGGGTDVGARILMA EAQKNFPQTFVIVNKPGADGEIGYTELAKATPDGYTIGFINLPTFVSLPHERQTKYKIDD VEPIMNHVYDPGVLVVKADSQFNTLADFVEYAKAHPEELTISNNGAGASNHIGAAHFAKE AGIQVTHVPFGGSTDMISALRGGHVNATVAKISEVASLVKSGELRLLASFTDKRLEGFED VPTLTESGYPVIFGSARAIVAPKGTPKEIIQKLHDVLKAALESPDNIEKSKNASLPLLYM SPEELAQYIKDQETYIIETVPTLGIK >gi|292606603|gb|ADGG01000007.1| GENE 11 12472 - 12912 415 146 aa, chain + ## HITS:1 COG:no KEGG:FN2104 NR:ns ## KEGG: FN2104 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 146 1 147 147 182 89.0 3e-45 MRKYDKFLTIGLFILEAFYFFLIKQLPEKAARYPYFVLGLMVFLTLLLAINTFIIKPKNE AEKEDDQFKGILYGQFFLIIALSAVYIVLIDIIGFFVTTAIYLFVTMLALKSNIKWSIVV SILFPIFLYLIFVSFLKVPVPRGFLL >gi|292606603|gb|ADGG01000007.1| GENE 12 12933 - 14423 2205 496 aa, chain + ## HITS:1 COG:FN2105 KEGG:ns NR:ns ## COG: FN2105 COG3333 # Protein_GI_number: 19705395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 493 1 493 494 749 95.0 0 MSDVLFGYVTALTPINLIAAIISVAIGITIGALPGLSAAMGVALLIPITFGMDPSTGLIT LAGVYCGAIFGGSISAILIRTPGTPAAAATAIDGYELTKQGKAGTALGTAITASFIGGIL SAIPLYLFAPRLAKLALLFGPAEYFWLSIFGLTIIAGASTKSIVKGLISGALGLMLSTVG MDPMLGNARFTFGVPALLSGIPFTAALIGLFSMSQVLMLAEKKIKEAGNMVDFDNKVLLS KEQILEILPTSLRSTVIGSIIGILPGAGASIAAFLGYNEAKRFSKKKELFGHGSIEGIAG AEAANNAVTGGSLIPTFTLGIPGESVTAVLLGGLMIQGLQPGPDLFTVHGKITYTFFAGF VIVNIFMLILGLFGSKLFAKVSRVSDSYLIPLIFALSVIGSYAINNQMADVWVMFVFGII GYFVQKFELNSASIVLALILGPIGESGLRRSLILNHNNYSILFQSTVSKVLLFLTLFSLL SPIVMAQLKKKKKTEE >gi|292606603|gb|ADGG01000007.1| GENE 13 14490 - 15221 951 243 aa, chain + ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 8 241 35 284 286 150 35.0 3e-36 MRSKFKDMIFVKGGKYTPCFTDDEKKVFDLEVCRYLTTQKIWLEVMNYNPSKFEGIYKPV DSVTWWEALEFCNKLSEKYNLEPVYDLSKKGILMINQLDGEKTSPDIADFKKTEGFRLPT EVEWNWFARGGQVAIDKGTFDYKYSGSDNIDEVAWYDKISNAETQNVGTKKPNQLELYDC SGNISEWCFDMDKSTKKNNKTVYRIIKGGSWFSEASWCSILPRFCYNSIYSSKEIGFRIV RTI >gi|292606603|gb|ADGG01000007.1| GENE 14 15441 - 17030 2287 529 aa, chain + ## HITS:1 COG:FN2106 KEGG:ns NR:ns ## COG: FN2106 COG1288 # Protein_GI_number: 19705396 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 14 529 3 518 518 830 89.0 0 MTLDIKYKEVKESLQTKIAITPIKMSEKQKKKRGFPSAFTVLAIILVLAAVLTYIVPSGQ FSRLTYDDSTNEFVITDHENNVTTEPATQEVLDRLQIQLSLDKFTEGVIKKPIAIPGTYQ RIEQKPQGFLDVLKAPITGALDTTDIMLFVFILGGIIGIINKIGAFDAGMAALSKRTKGK EFLLVTLVFVLTTLGGTTFGLAEETIAFYPILMPIFLLSGFDVLTCIAAIYMGSSIGTMF STINPFATVIASNAAGISFTEGLTFRIVTLVLASIITLAYMYWYAKKVNKDATKSYVYAD KEEIHKRFLGEYDSNSEKEFTWRRRLCLLIFAAAFPVLIWGVSRGGWWFEEMSALFLGVA LLLMFFSGLSEKDAVNTFIAGAGDLVGVVLTIGLARSINIVMDNGFISDTLLYYSTEFVA GMSKGTFAIAQLLIFSVLGFFIPSSSGLAVLSMPIMAPLADTVGLSREVVINAYNWGQGW MSFITPTGLILVTLEMAGTTFDKWLKYILPLMGIIGVFSAVMLVINTMF >gi|292606603|gb|ADGG01000007.1| GENE 15 17095 - 18936 1478 613 aa, chain - ## HITS:1 COG:FN2029 KEGG:ns NR:ns ## COG: FN2029 COG1835 # Protein_GI_number: 19705320 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Fusobacterium nucleatum # 1 612 1 601 604 772 72.0 0 MNELKKRSIGIDILKAISLISVIIYHFYEYKGTYIGVILFFVISGYLITEVLYERDDSYF SFIKRRYNKIFPPLIEVLTFTYLAFYYFYDYISEKLIYSSLSSLFGVSNLYQISTGMSYF ERSGDLFPLLHTWSLSIEIQFYILFPFLIYLFKKLKLDKKVIIAIIMALSFISAGQMFYK EYINWDISAIYYGTDTRIFSIFMGSAFYFLFKDRDLENEKQRLNTISYMCLGVIVVIVLS VDYLSKSNYYGFLFLISILGSFMTVTSLKTGFLDFENPVANTLAKLGEHSYVYYLWQYPL MIFSLEFFKWSDIDYNYTVGIQVIILIILSEISYEFLIKRRQESIVLRRIFLVLYVALLA FLPISSETNSEEVKNRANEIDKMAVVETTATEKVETSENPLKPDNKDYVEERLLAEKINT TKHNEIKVDTKPSKTNINVKTEEIKSQETKTVVKNTNTIEAKDFTFIGDSVMKMGEPYIK EIFKDANVDAKVSRQFTDLPKILEELKGSKKLKNTVVIHLGTNGVINKEAFESSMKLLKG KKVYIMNTVVPKPWEKSVNKNLAEWSQEYDNITMIDWHKYAKGEKQLFYKDATHPKPEGA KKYAEFIFKNIKR >gi|292606603|gb|ADGG01000007.1| GENE 16 19116 - 21134 3100 672 aa, chain - ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 1 671 1 671 671 996 95.0 0 MDLLTQVMYLGLVAGILSLLAAFYYAKKVEHYQINIPKVEEITSAIREGAMAFLTAEYKI LIVFVVVVAAALGIFISVPTAIAFVLGAITSAIAGNAGMRIATKANGRTAIAAKEGGLAK ALDVAFSGGAVMGLTVVGLGMFMLSLILLLTQKFGISVNDVTGFGMGASSIALFARVGGG IYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAGMGADLFESYVGSIIAT ITLAYLLPVADATPYVAAPLLISAFGIVASIIATLTVKTDDGSKVHAKLEMGTRIAGLLT IIASYGIIQYLGLDMGIFYAIVAGLVAGLVIAYFTGIYTDTGRRAVNRVSDAAGTGAATA IIEGLAIGMESTVAPLIVIAIAIIVSFKTGGLYGISIAAVGMLATTGMVVAVDAYGPVAD NAGGIAEMSELPHEVRETTDKLDAVGNSTAAVGKGFAIGSAALTALSLFAAYKEAVDKLT SEPLIIDVTDPEVIAGLFIGGMLTFLFSALTMTAVGKAAIEMVEEVRRQFREFPGIMDRT QKPDYKRCVEISTHSSLKQMILPGVLAIIVPVVIGLWSVKALGGLLAGALVTGVLMAIMM ANAGGAWDNGKKQIESGYKGDKKGSDRHKAAVVGDTVGDPFKDTSGPSLNILIKLMSIVS LVLVPLFVSVMK >gi|292606603|gb|ADGG01000007.1| GENE 17 21210 - 22226 1032 338 aa, chain - ## HITS:1 COG:FN2031 KEGG:ns NR:ns ## COG: FN2031 COG1477 # Protein_GI_number: 19705322 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Fusobacterium nucleatum # 19 338 1 320 320 509 82.0 1e-144 MVKTNKFIAFILVFLSIFLISCGKKVEKIEESKFLFGTYIKIVVYSDNKEKAMNSIEKTF NEIQRIDEKYNSKMEGSLIYKLNTTDNKSIKLDAEGLELFKGVKKAYELSEHKYDVTIAP LLELWGFTEEAMELPNLKLPTKEEIEYTKTFVDFSKVHISEDGTLTLESPVKEIDTGSFL KGYAIYRAKEVLKADGIDSAFITSISSMDLIGTKPEGKPWKIGLQNPENPSEILGIVPLK NRAMGVSGDYQTYVEIDGKMYHHILDKDTGYPVEDKKMVVVLCDNAFEADLLSTTFFLMP IDKAINYVNSRDDLEILIVDKDMNIITSKNFEYEEVKK >gi|292606603|gb|ADGG01000007.1| GENE 18 22210 - 22431 378 73 aa, chain - ## HITS:1 COG:no KEGG:FN2032 NR:ns ## KEGG: FN2032 # Name: not_defined # Def: DNA-directed RNA polymerase omega chain (EC:2.7.7.6) # Organism: F.nucleatum # Pathway: Purine metabolism [PATH:fnu00230]; Pyrimidine metabolism [PATH:fnu00240]; Metabolic pathways [PATH:fnu01100]; RNA polymerase [PATH:fnu03020] # 11 73 1 63 64 85 88.0 7e-16 MKKEITYDELLSKIPNKYVLTIVCGERARERAKERMERNGEPLPLTKYDKKDTEMKKVFK EILAGKVGYGKDE >gi|292606603|gb|ADGG01000007.1| GENE 19 22432 - 22989 895 185 aa, chain - ## HITS:1 COG:FN2033 KEGG:ns NR:ns ## COG: FN2033 COG0194 # Protein_GI_number: 19705324 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Fusobacterium nucleatum # 1 185 1 185 185 317 95.0 6e-87 MSLGALYVVSGPSGAGKSTVCKLVRERLGINLSISATSRKPRNGEQEGVDYFFITAEEFE RKIKNDDFLEYANVHGNYYGTLKSEVEERLQRGEKVLLEIDVQGGVQVKEKFPEANLVFF KTPTKEELEKRLRGRNTDSEEVIQARLKNSLKELEYEDKYDTVIINNEIEQACNDLISII ENGVR >gi|292606603|gb|ADGG01000007.1| GENE 20 23001 - 23879 1033 292 aa, chain - ## HITS:1 COG:FN2034 KEGG:ns NR:ns ## COG: FN2034 COG1561 # Protein_GI_number: 19705325 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Fusobacterium nucleatum # 1 292 1 292 292 390 86.0 1e-108 MRSMTGYSKLNYEDENYVISMEIKSVNNKNLTTKVKLPYNLNLLENYIRAEIASFISRGS IDFRIEFGDKNENLKSLKYDEDLAKSCMQILNKMEEDFNEKFSNKLDFLVRNFGVISQKD LDTDEEKYKEIISLKLRELLQDFIKTKVEEGNRLRSFFKEQLNILKSKVEEIKKLKPQVV ENYRERLLANVNSVKADIDFKEEDILKEILLFSDRVDITEEVSRLESHFKQLEYEFNADK DSQGKKIEFIFQEIFREFNTMGVKSNMYEISKLVVEGKNELEKMREQIMNIE >gi|292606603|gb|ADGG01000007.1| GENE 21 24082 - 26409 3012 775 aa, chain - ## HITS:1 COG:FN2035 KEGG:ns NR:ns ## COG: FN2035 COG0086 # Protein_GI_number: 19705326 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Fusobacterium nucleatum # 1 774 546 1319 1319 1388 92.0 0 METTPGRVLFNEILPEVDRNYHETYGKKQIKALIKSLYEAHGFTETAELINRIKNFGYHY GTFAGVSVGIEDLVIPPEKKILLKKADDEVTQIEKDYKSGKIINEERYRKTIEVWSRTTQ AVTKAMMDNLDKFNPVYMMATSGARGNENQMRQLAGMRGNMADTQGRTIEVPIKANFREG LTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNEEDCHTHEGIEVEALV GADGKVIEKLKERINGRVLAEDLVHDGKVIAKRNTMIHKDLLKKIEELEIKKVKIRSPLT CALEKGVCQKCYGMDLSNYNEILLGEAVGVVAAQSIGEPGTQLTMRTFHTGGVAGAATVV NSKKAENDGEVSFRDIKTIEINGEDVVVSQGGKIIIADNEHEVDSGSVIKVTEGQHVNEG DVIVTFDPYHIPIISSHDGKVQYRHFTPKNIRDEKYDVHEYLVVRSVDSTESEPRVHILD KKNEKLATYNIPYGAYMMVRDGAKVKKGDIIAKIIKLGEGTKDITGGLPRVQELFEARNP KGKAILSEIDGRIEILPTKKKQMRVINVKSLTNPDDFKEYLIPMGERLVVTDGLKIKAGD KITEGAISPYDILSIKGLVAAEQFILESVQQVYREQDVSVNDKHIEIIVKQMFRKVRIVD SGASLYLEDEVIEKRIVDLENKKLAEEGKALIKYEPVIQGITKAAVNTGSFISAASFQET TKVLSNAAIEGKVDYLEGLKENVILGKKIPAGTGFNKYKAIKVKYSSDEEKSEEE >gi|292606603|gb|ADGG01000007.1| GENE 22 26475 - 28043 1806 522 aa, chain - ## HITS:1 COG:FN2035 KEGG:ns NR:ns ## COG: FN2035 COG0086 # Protein_GI_number: 19705326 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Fusobacterium nucleatum # 1 519 1 519 1319 971 94.0 0 MGIRSFDKIRIKLASPEKILEWSHGEVTKPETINYRTLNPEKDGLFCEVIFGPTKDWECS CGKYKRMRYKGLVCEKCGVEVTRAKVRRERMGHITLASPVSHIWYSKGSPNKMSLIIGIS SKELESVLYFARYIVTSSEEDSIKVGKILTEKEYKLLKQTYSNKFEAYMGADGILKLLTT IDLEALRDELENELIDVNSAQKRKKLVKRLKIVRDFISSGNRPEWMILTNVPVIPAELRP MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIKAPEIVVKNEKRMLQEAVDALIDNGR RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK MALELYKPFIMRELVRRELANNIKMAKKLVEESDDKVWAVIEDVIADHPVLLNRAPTLHR LSIQAFQPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLTLSPESMMEAKLLMFAPNNII SPSSGEPIAVPSQDMVMGCYYMTKERKGEKEKENSFQTLIKL >gi|292606603|gb|ADGG01000007.1| GENE 23 28079 - 31639 844 1186 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 888 1142 1085 1391 1392 329 55 1e-89 MQKLIERLDFGKIKARGSMPHFLEFQLNSYEDFLQTNMSPNKREDKGFESAFKEVFPIES SNGDVRLEYIGYELHEAEAPLNDELECKRRGKTYSNSLKVRLRLINKKMGNEIQESLVYF GEVPKMTERATFIINGAERVVVSQLHRSPGVSFSKEVNTQTGKDLFSGKIIPYKGTWLEF ETDKNDFLSVKIDRKKKVLATVFLKAVDFFKDNKEIIEHFLEAKELNLKSLYKKYSKEPE ELVNVLKQELEGSLLKEDILDEETGEFIAETEAIITEELINILIENKIETISYWFVGPED KLLANTLANDETSTEEQAVVEVFKKLRPGDQVTIDSARSLIRQMFFNPQRYDLEPVGRYK MNKRLKLDVADNQISLTKEDVLGTMKYVTDLYNGDQNVHTDDIDNLSNRRIRGVGELLLM QIKTGLAKMNKMVKEKMTTQDIETVSPQSLLNTRPLNALIQDFFGSGQLSQFMDQSNPLA ELTHKRRISALGPGGLSRERAGFEVRDVHDSHYGRICPIETPEGPNIGLIGSLATYAKIN KYGFIETPYVKVENGVALVDDVRYLAADEEDGLFIAQADTKLGKDNKLQGLVVCRYGHEI VEIEPERVNYMDVSPKQVVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLRAEAPFIGT GLERKVAVDSGAVVTTKVAGKVIYVDGKKIVIEDADKKEHTYRLLNYERSNQSMCLHQTP LVDLGDIVKAGDIIADGPATKSGDLALGRNILMGFMPWEGYNYEDAILISDRLRKEDVFT SIHIEEYEIDARATKLGDEEITREIPNVSESALRNLDENGIIMIGSEVGPGDILVGKTAP KGETEPPAEEKLLRAIFGEKARDVRDTSLTMPHGSKGVVVDILELSRENGDELKAGVNKS IRVLVAEKRKITVGDKMSGRHGNKGVVSRVLPAEDMPFLEDGTHLDVVLNPLGVPSRMNI GQVLEVHLGMAMRTLNGGTCIATPVFDGATEEQVKDYLEKQGFPRTGKVTLYDGRTGEKF DNKVTVGVMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAY GASNILQEMLTVKSDDITGRTKTYEAIIKGEAMPESDLPESFKVLLKEFQALALDIELCD EEDNVINVDEEVEVEETPTEYSPQYEIDTFGLHEIDEDAEDVEDLE >gi|292606603|gb|ADGG01000007.1| GENE 24 31888 - 32253 570 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237738814|ref|ZP_04569295.1| LSU ribosomal protein L12P [Fusobacterium sp. 2_1_31] # 1 121 1 121 121 224 97 8e-58 MAFNKEQFIADLEAMTVLELKELVSALEEHFGVTAAAPVAVAAAGPAEAAEEKTEFDVVL KSAGGNKIAVIKEVRAITGLGLKEAKDLVDNGGVIKEAAPKEEAEAIKEKLTAAGAEVEV K >gi|292606603|gb|ADGG01000007.1| GENE 25 32302 - 32814 805 170 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237738813|ref|ZP_04569294.1| LSU ribosomal protein L10P [Fusobacterium sp. 2_1_31] # 1 170 1 170 170 314 96 4e-85 MATQVKKELVAELVEKIKKAQSVVFVDYQGIKVNEETSLRKQMRENGAEYLVAKNRLFKI ALKESGVEDNFDEILEGTTAFAFGYNDPVAPAKAVFDLAKTKAKAKQNVFKIKGGYLTGK KVSAQAVEELAKLPSREQLLSMLLNSMLGPVRKLAYATVAIADKKEGSAE >gi|292606603|gb|ADGG01000007.1| GENE 26 32967 - 33674 1184 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237738812|ref|ZP_04569293.1| LSU ribosomal protein L1P [Fusobacterium sp. 2_1_31] # 1 235 1 235 235 460 100 1e-129 MAKHRGKKYLEVAKLVETGKLYDIKEALELVQKTRTAKFTETVEVALRLGVDPRHADQQI RGTVVLPHGTGKTVKILAITSGENIEKALAAGADYAGAEEYINQIQQGWLDFDLVIATPD MMPKIGRLGKILGTKGLMPNPKSGTVTPDIAAAVSEFKKGKLAFRVDKLGSIHAPIGKVD FDLDKIEENFKAFMDQIIRLKPATSKGQYLRTVAVSLTMGPGVKMDPAIVAKIVG >gi|292606603|gb|ADGG01000007.1| GENE 27 33736 - 34161 701 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237738811|ref|ZP_04569292.1| LSU ribosomal protein L11P [Fusobacterium sp. 2_1_31] # 1 141 1 141 141 274 99 5e-73 MAKEVIQIIKLQLPAGKANPAPPVGPALGQHGVNIMEFCKAFNAKTQDKAGWIIPVEISV YSDRSFTFVLKTPPASDLLKKAAGISSGAKNSKKEVAGKITTAKLRELAETKMPDLNASS VETAMKIIAGSARSMGIKIED >gi|292606603|gb|ADGG01000007.1| GENE 28 34195 - 34776 778 193 aa, chain - ## HITS:1 COG:FN2041 KEGG:ns NR:ns ## COG: FN2041 COG0250 # Protein_GI_number: 19705332 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Fusobacterium nucleatum # 1 193 1 193 193 312 87.0 2e-85 MSIENVRKWFMIHTYSGYEKKVKTDLEQKIGTLQLRDVVTNILVPEEESIEIVRGKPKKI YRKLFPAYVMLEIEATREENENGISYKVDPDVWYIIRNTNGVTGFVGVGSDPIPMEDDEV KNIFNIIGMDTSKETIKLDFAEGDFVKILKGSFIDQEGQVAEIDYEHGRVKVMVDIFGRM TPVEIEVDGVLKV >gi|292606603|gb|ADGG01000007.1| GENE 29 34773 - 34949 244 58 aa, chain - ## HITS:1 COG:FN2042 KEGG:ns NR:ns ## COG: FN2042 COG0690 # Protein_GI_number: 19705333 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Fusobacterium nucleatum # 1 58 1 58 58 83 86.0 1e-16 MNLFQKVKMEYSKVEWPSKTEVIHSTIWVITMTVIVSVYLGVFDILAVKALNVLEALI >gi|292606603|gb|ADGG01000007.1| GENE 30 35082 - 35234 266 50 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19705334|ref|NP_602829.1| 50S ribosomal protein L33P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 50 1 50 50 107 100 1e-22 MRVQVILECTETKLRHYTTTKNKKTHPERLEMMKYNPVLKKHTLYKETKK >gi|292606603|gb|ADGG01000007.1| GENE 31 35503 - 36096 617 197 aa, chain - ## HITS:1 COG:no KEGG:ACIAD0919 NR:ns ## KEGG: ACIAD0919 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 6 196 7 188 189 105 31.0 8e-22 MKKYLFLVVLLLATLSSFSYSNYPRPNYKYYIVKEPMVVKNLELPVGTEIVYFDTSLFGD GESSRPLREKNIYQIFFPDDKPLIWGGIPVSLIERFFNRDMKGFTVYPELGNSLVSDENK RKLMEKNEFIKLWFMWAKNMDVYIKDEKDWSFNPDNMVLGGEADSRYIDYGNLEYFNGKN SMEEHLRKLNEAARNIK >gi|292606603|gb|ADGG01000007.1| GENE 32 36130 - 36558 509 142 aa, chain - ## HITS:1 COG:FN2045 KEGG:ns NR:ns ## COG: FN2045 COG0735 # Protein_GI_number: 19705335 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Fusobacterium nucleatum # 1 142 1 142 142 245 89.0 2e-65 MELQLHTGDIGNYLKNHDIKPSYQRMKIFQYLLDNHVHPTVDTIYKALCPEIPTLSKTTV YNTLNLFVEKKLVQVIVIEENETRYDLITHTHGHFKCNSCGALFDVELNIDYSMSPELAD CEIDEKHIYFKGLCKNCKGKQN >gi|292606603|gb|ADGG01000007.1| GENE 33 36715 - 37029 376 104 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 99 278 376 405 124 55.0 5e-29 MEDLQVKNMVKNHKLARNIVDVSWSEFSRILEYKAKWHGKTIVRVDKFFASSQICNCCGY RNEEVKDLSIREWTCSVCGAVHNRDINAAKNILKEGLRILEISA Prediction of potential genes in microbial genomes Time: Thu May 19 21:19:54 2011 Seq name: gi|292606602|gb|ADGG01000008.1| Fusobacterium sp. 1_1_41FAA cont1.8, whole genome shotgun sequence Length of sequence - 9307 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 5, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 440 736 ## gi|294781923|ref|ZP_06747255.1| conserved hypothetical protein - Term 461 - 495 1.1 2 1 Op 2 . - CDS 508 - 867 713 ## gi|294781924|ref|ZP_06747256.1| late embryogenesis abundant protein - Prom 890 - 949 9.2 3 2 Op 1 1/0.000 - CDS 960 - 2450 1996 ## COG2317 Zn-dependent carboxypeptidase 4 2 Op 2 1/0.000 - CDS 2469 - 3776 1854 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 3842 - 3901 10.4 - Term 3862 - 3916 8.3 5 3 Op 1 20/0.000 - CDS 3939 - 4325 552 ## COG0822 NifU homolog involved in Fe-S cluster formation 6 3 Op 2 1/0.000 - CDS 4400 - 5593 1676 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 7 3 Op 3 . - CDS 5673 - 6323 691 ## COG0177 Predicted EndoIII-related endonuclease - Prom 6369 - 6428 5.6 8 4 Op 1 . - CDS 6505 - 6966 398 ## FN0056 acetyltransferase (EC:2.3.1.-) 9 4 Op 2 1/0.000 - CDS 7019 - 7522 283 ## PROTEIN SUPPORTED gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase 10 4 Op 3 . - CDS 7532 - 7792 381 ## COG4115 Uncharacterized protein conserved in bacteria 11 4 Op 4 . - CDS 7785 - 8039 353 ## Dtox_4301 prevent-host-death family protein - Prom 8069 - 8128 11.5 - Term 8115 - 8159 9.4 12 5 Op 1 . - CDS 8319 - 8828 384 ## CCC13826_1945 carbon monoxide dehydrogenase 1 (CODH 1) (EC:1.2.99.2) 13 5 Op 2 . - CDS 8904 - 9098 56 ## gi|262067352|ref|ZP_06026964.1| conserved hypothetical protein - Prom 9232 - 9291 7.8 Predicted protein(s) >gi|292606602|gb|ADGG01000008.1| GENE 1 2 - 440 736 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781923|ref|ZP_06747255.1| ## NR: gi|294781923|ref|ZP_06747255.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 146 1 146 147 131 100.0 1e-29 MKKLVLVVGLILGLSAMAEDASVASKIESAKKGVVNTLKKTEDKVEEIKGKVEEKVDAMK ADAKKDATKDVEAAKKDVKEVKDKVETKADAAKADVKKDMKEVKDKVETKADAAKADVKK DMKEVKDKVETKADAAKADVKKDVKE >gi|292606602|gb|ADGG01000008.1| GENE 2 508 - 867 713 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781924|ref|ZP_06747256.1| ## NR: gi|294781924|ref|ZP_06747256.1| late embryogenesis abundant protein [Fusobacterium sp. 1_1_41FAA] # 1 119 1 119 119 120 100.0 2e-26 MGIFDEVTGKLGELKDTVVDEAKKAKDEAVAKAEELKDKAVDKSKELKEGAENKAAELKD KAEEKAKELKEGAENKANELKDKAEEKAKELKEGAEGKAAELKDKVIGGADDLLNKFKK >gi|292606602|gb|ADGG01000008.1| GENE 3 960 - 2450 1996 496 aa, chain - ## HITS:1 COG:FN0061 KEGG:ns NR:ns ## COG: FN0061 COG2317 # Protein_GI_number: 19703413 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Fusobacterium nucleatum # 1 496 1 496 496 760 83.0 0 MKEKFRELVKRKNRIHANLELIQWDLETKTPLKSRPYLSELVGELSMQDYALSTSDEFVN LVEELNKQKENLTEIEKREIELSMEEIEKKKKIPADEYEDYAKLTSYNQTVWEEAKAKKD FSIVKEGLKKIFDYNKKFATYRRKDEKTLYDVLLNDYEKGMDTERLDIFFSELKKEIVPF LKKIQEKKKTIKEVDKISVPVDEDVQLKFAKFLSSYVGFDFEKGLVETSEHPFTLNLNKN DVRLTTKNKKDSPISTVFSIIHESGHGIYEQQTADELIDTLLGTGGSMGLHESQSRFMEN IVGENKAFWKPLYNKAGEFYPFLKDLEFEEFYKQINRIEPGLIRVEADELTYSLHIMLRY EIEKMLINGEVNIDDLPKIWNEKVKEYLGLEPKNDSEGLMQDIHWYCGLIGYFPSYAIGN AYASQIYNTMKKDFDVEKALENQDLKKITDWLGEKIHKYGLLKDTPTIIKEVTGEELNPK YYIEYLKEKYSKIYEI >gi|292606602|gb|ADGG01000008.1| GENE 4 2469 - 3776 1854 435 aa, chain - ## HITS:1 COG:FN0060 KEGG:ns NR:ns ## COG: FN0060 COG1686 # Protein_GI_number: 19703412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Fusobacterium nucleatum # 64 435 3 368 368 430 69.0 1e-120 MFKRFKNLYLIMAILGLIFVSSYSSEVKEIKGIEEYSAQVLGEDEEDAEDTSQTIVMPVI KKIEKKEEVKKESEVKKEEIKEEVKKETKKEAVKEEPKKKEETKKEEIKKEPETKVVKEE AKKPEKIETKEVKKIEEEKKTETKNLALEEPENPEKDQQKYEMITYYSKDGVEWVLPDNF RAVLVGDLNGNVIFSKNADTMYPLASVTKVMSLLVTFDEINAGNIGLHDSVRISKTPLKY GGSGIALKEGQIFILEDLIKASAVYSANNATYAMAEYVGEGSIFNFVAKMNKKLKQLGLQ NDIKYHTPAGLPTRNTKMPMDEGTPRGIYKLSIEALKYDKYIEIAGIKNTKIYNGKISIR NRNHLIGEDGVYGIKTGFHKEAKYNITVAVKFEGIDLIIVVMGGETYKTRDDLVRTIIAN LKENYTVINGQLIRK >gi|292606602|gb|ADGG01000008.1| GENE 5 3939 - 4325 552 128 aa, chain - ## HITS:1 COG:FN0059 KEGG:ns NR:ns ## COG: FN0059 COG0822 # Protein_GI_number: 19703411 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Fusobacterium nucleatum # 1 125 4 128 128 212 92.0 1e-55 MQYTEKVMQHFMNPQNVGVIENPDGYGKVGNPSCGDIMEIFIKVDNNILTDVKFRTFGCA SAIASSSISTEMIIGKTVDEALQVTNKAVVDALGGLPAVKMHCSVLAEEAIKMAIEDYIA KRDGKKAE >gi|292606602|gb|ADGG01000008.1| GENE 6 4400 - 5593 1676 397 aa, chain - ## HITS:1 COG:FN0058 KEGG:ns NR:ns ## COG: FN0058 COG1104 # Protein_GI_number: 19703410 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Fusobacterium nucleatum # 1 397 1 397 397 708 92.0 0 MKVYLDNNATTKVDEEVVKAMMPYFSDYYGNPFSLHLFGNETGLAVTEARQTIADILKAK PSEIIFTASGSEGDNLAIRGIAKAYKHRGKHIITSTIEHPAVKNTFIDLMEDGFEITMVP VDENGVMILDEFKKALREDTILVSVMHANNEVGSFQPVEEIGKITKERKIIFHVDAVQTM GKVEIYPEKMGIDLLSFSGHKFHAPKGIGVLYKRDGIRFAKVITGGNQEGKRRPGTSNVP YIVGLAKALKIATENMKEEWVREENLRDYFEDEVSKRIPEIKINGKGARRLPGTSSITFK YLEGESMLLNLSLKGIAVSSGSACSSDSLQPSHVLLAMGIPAEYAHGTLRFSLSKYTTKE EIDYTIEALVEIIGKLRELSPLWKTFKDNKLTDTASF >gi|292606602|gb|ADGG01000008.1| GENE 7 5673 - 6323 691 216 aa, chain - ## HITS:1 COG:FN0057 KEGG:ns NR:ns ## COG: FN0057 COG0177 # Protein_GI_number: 19703409 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Fusobacterium nucleatum # 14 212 1 199 201 360 90.0 1e-99 MTKKEKVKKILEELHKKFGEPKCALNFETPFELLVAVILSAQCTDKRVNIVTEEMFKEVN TPEQFANMEIEEIENYIKSTGFFRNKAKNIKKCSQQLLEKYNGEIPQDMDKLTELAGVGR KTANVVRGEVWGLADGITVDTHVKRITNLIGLVKSEDPIKIEQELMKIVPKKSWIVFSHY LILHGRATCIARRPQCKNCEISEYCNYGKIKLLKEN >gi|292606602|gb|ADGG01000008.1| GENE 8 6505 - 6966 398 153 aa, chain - ## HITS:1 COG:no KEGG:FN0056 NR:ns ## KEGG: FN0056 # Name: not_defined # Def: acetyltransferase (EC:2.3.1.-) # Organism: F.nucleatum # Pathway: Tyrosine metabolism [PATH:fnu00350]; 1- and 2-Methylnaphthalene degradation [PATH:fnu00624]; Benzoate degradation via CoA ligation [PATH:fnu00632]; Limonene and pinene degradation [PATH:fnu00903] # 1 150 9 159 159 178 77.0 6e-44 MREDDIEIIYKNLHLDFVNKYFKNNKEKKKIHDNHSEWYKTHISSFDYLIYIFEDDEANF VAMTSYEILEDTAKINIYLNKDYRNKGYSQEILAESIDKFLNDNKNIKTLKACILEENLA SKKIFENLSFIYDKKEICRDELEYLIYRKIVRY >gi|292606602|gb|ADGG01000008.1| GENE 9 7019 - 7522 283 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase [Brachyspira murdochii DSM 12563] # 5 167 4 166 166 113 36 5e-25 MEIKIREIEVEDYKELLDFMKKVKGETNFLRGYPNEIKMSYEDEKEYIKKVKSSETSNHF VAIKGNKIIGCTSFNGNTARKMKHYGTIGISVLKEYWGRGIATTLLEKLISWSKEKGIKK INLDVFENNERAIKLYEKFGFKLEGCIEDGIFDGENYINLLVYGLKI >gi|292606602|gb|ADGG01000008.1| GENE 10 7532 - 7792 381 86 aa, chain - ## HITS:1 COG:SA2195 KEGG:ns NR:ns ## COG: SA2195 COG4115 # Protein_GI_number: 15927985 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 3 84 5 88 88 85 53.0 3e-17 MNNLVWTHKAWQDYLYWQTQDKKTLKKINELVKDIERNGALKGIGKPEVLKNESAYSRRI DEKNRLVYRIVDGFIWIIACKGHYEE >gi|292606602|gb|ADGG01000008.1| GENE 11 7785 - 8039 353 84 aa, chain - ## HITS:1 COG:no KEGG:Dtox_4301 NR:ns ## KEGG: Dtox_4301 # Name: not_defined # Def: prevent-host-death family protein # Organism: D.acetoxidans # Pathway: not_defined # 1 84 1 84 84 83 52.0 2e-15 MLAINYTTLRTNLKSYFDKAVDNDEDIIITRKNERNVVLLSLDKYNEFLKAMRNLEYMTK IREGIAELEAGKGKIHDLIEVDDE >gi|292606602|gb|ADGG01000008.1| GENE 12 8319 - 8828 384 169 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1945 NR:ns ## KEGG: CCC13826_1945 # Name: not_defined # Def: carbon monoxide dehydrogenase 1 (CODH 1) (EC:1.2.99.2) # Organism: C.concisus # Pathway: not_defined # 1 166 1 159 168 69 32.0 4e-11 MKEYILDTFKIGMSEKEAEKYFSKEIKKMNITERKIYLKNERKYLKFFKILLKRNRKFII KIREYFEYEISNLFKKEQKILKKEIININNFNFKFKNMHLKNRKYLEIFLKISYRDAFGY QGMYTIYFPKDKIYINAITDYQFIIIFINNNKEEIIKIAKKCKLFIGLL >gi|292606602|gb|ADGG01000008.1| GENE 13 8904 - 9098 56 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262067352|ref|ZP_06026964.1| ## NR: gi|262067352|ref|ZP_06026964.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 64 191 254 254 100 95.0 2e-20 MRGSYLNNKKIGIWHEYENNKVKIKVAFDEYEKFSGIYREFFPNGDIKEEKYYFQGKEIK ANEK Prediction of potential genes in microbial genomes Time: Thu May 19 21:20:22 2011 Seq name: gi|292606601|gb|ADGG01000009.1| Fusobacterium sp. 1_1_41FAA cont1.9, whole genome shotgun sequence Length of sequence - 5922 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 4, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 173 - 556 528 ## gi|294781936|ref|ZP_06747268.1| conserved hypothetical protein 2 1 Op 2 . - CDS 572 - 787 314 ## gi|294781937|ref|ZP_06747269.1| hypothetical protein HMPREF0400_02167 - Prom 811 - 870 8.1 - Term 850 - 896 7.3 3 2 Op 1 . - CDS 925 - 2100 1515 ## CHU_1410 hypothetical protein (EC:2.4.1.5) 4 2 Op 2 . - CDS 2102 - 2545 588 ## BT9727_1645 hypothetical protein - Prom 2636 - 2695 6.0 - Term 2667 - 2707 7.8 5 3 Tu 1 . - CDS 2727 - 3287 713 ## FN0142 hypothetical protein - Prom 3323 - 3382 7.5 - Term 4231 - 4270 5.4 6 4 Op 1 . - CDS 4288 - 4851 593 ## FN0142 hypothetical protein - Prom 4871 - 4930 8.5 7 4 Op 2 . - CDS 4934 - 5575 737 ## gi|294781943|ref|ZP_06747275.1| conserved hypothetical protein Predicted protein(s) >gi|292606601|gb|ADGG01000009.1| GENE 1 173 - 556 528 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781936|ref|ZP_06747268.1| ## NR: gi|294781936|ref|ZP_06747268.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 127 1 127 127 222 100.0 5e-57 MSELQIVRKKIQGDFFLEKSYKKGKLFYEVLRYKDDYIGINYAYLEDELREETYINDNRI GMVIVNEKDKIYICTLDEKRREVGITVTYHNKSGRLAHEIDYLDDICMSTNRIYKDSFIK NAPLIKI >gi|292606601|gb|ADGG01000009.1| GENE 2 572 - 787 314 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781937|ref|ZP_06747269.1| ## NR: gi|294781937|ref|ZP_06747269.1| hypothetical protein HMPREF0400_02167 [Fusobacterium sp. 1_1_41FAA] # 1 71 1 71 71 99 100.0 6e-20 MTEVTKDRRIYKTKEGYTIYADDFHSKVEYEVFYKKGKHIGTISAETIIKNGFHKEDIDT SKKDPKKRIDK >gi|292606601|gb|ADGG01000009.1| GENE 3 925 - 2100 1515 391 aa, chain - ## HITS:1 COG:no KEGG:CHU_1410 NR:ns ## KEGG: CHU_1410 # Name: not_defined # Def: hypothetical protein (EC:2.4.1.5) # Organism: C.hutchinsonii # Pathway: Starch and sucrose metabolism [PATH:chu00500]; Two-component system [PATH:chu02020] # 225 374 53 214 621 68 30.0 5e-10 MKIYEIGFDYANYNVIFTFKINKDASFFFSKEELDRYFRKDRFYEEANLKRYVEGEAKIL DVTLLDIYKDKYGTYEGLEKYVELIPDGKKSNVKDIISIPGFGMKVLLSRKAKEYIEKKY SGKLEYLKVSYDKKDFYIVTDIKNIEYCYSLKLPPNIIDVYDFSKVSGKNDIFKIGTIEK KDFLKERFFCIKNFKDYIEESDLKGYKFEEMKDINDIEIFKEEKQEETQFTEIEEKGYYK SGKLKYTGTIWKGFRIKQWKSWYENGNLESDGEFNMKGEEEGEWRYYHQNGKIKNVANYE NGKLVGLVKNFDENGKFYSSTYYEKGSNLTKWQFFYEDEKNIKKEGMAYDMGDKVEKRWD ITGEWKYYNKEGKLEKIETYENSKIIKVEEF >gi|292606601|gb|ADGG01000009.1| GENE 4 2102 - 2545 588 147 aa, chain - ## HITS:1 COG:no KEGG:BT9727_1645 NR:ns ## KEGG: BT9727_1645 # Name: yeeF # Def: hypothetical protein # Organism: B.thuringiensis # Pathway: not_defined # 10 138 421 544 544 70 35.0 1e-11 MENNKNKANSKILDKQLQNAGVKKPDYNCAAHHLVSDATMPKATKALNKYGIEINSATNG VYLPTPNADTSKVTTEVVHSKPNGKEYKELLEKSIPDIAENMENTNASYDEIQAELENEL NNTRIKLLTGELKINNAKFKTTEKGEK >gi|292606601|gb|ADGG01000009.1| GENE 5 2727 - 3287 713 186 aa, chain - ## HITS:1 COG:no KEGG:FN0142 NR:ns ## KEGG: FN0142 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 28 184 3 156 160 179 63.0 6e-44 MKLKKKLIWIFSISGILLLGFIAFISQYAYIVPKNNYSILDQSGDIRIESYPKLKEVKFM YNTDLYIEFTRPINLELEKINFRINDEIIGIIEINKNLNDLENFAEPYIDEKTKEKSIRK IYLVQNNFLKILGKKNEKYKVGTGTIEGRFYIDIYIKDLKTNETFIIKRDNIHIYYESAG IKLFSM >gi|292606601|gb|ADGG01000009.1| GENE 6 4288 - 4851 593 187 aa, chain - ## HITS:1 COG:no KEGG:FN0142 NR:ns ## KEGG: FN0142 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 24 187 1 160 160 168 57.0 8e-41 MRININSIGVVIIFSIIFLLLLILQFLHRVPENHYTISDQTQEIILEDYPELKEISFMYS TDLLIEFYKKRDNLELEKINFRFNDEVIGTIEINRNINDLENFGQTYTANNGKKVVIRKS YPLQKEFLRILGKRNEKYKVGTGTIEGRFYIDIYIKDLKTNKTFIIKRDNISIYYESAGI KLYLPSI >gi|292606601|gb|ADGG01000009.1| GENE 7 4934 - 5575 737 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781943|ref|ZP_06747275.1| ## NR: gi|294781943|ref|ZP_06747275.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 213 1 213 213 324 100.0 2e-87 MNDDTFIFLDEFLDTELYIFLNRCKEEILKFVWKEKDIEIIGKYQEKLESCYNTELQLEV LFDLAEIGYDAVAYRILSKVEEEYFECLEIYNWDDKYLVAEISIYNYPDEIRNLDNEIIW TKENINKEHMDIINEKNKKLEELKRKGREYFKYLDELEILRREGVNTPKREEKLIKKIEE REEVGKRYAEYKRNLKKWIKSLKDNEIINLLIN Prediction of potential genes in microbial genomes Time: Thu May 19 21:20:59 2011 Seq name: gi|292606600|gb|ADGG01000010.1| Fusobacterium sp. 1_1_41FAA cont1.10, whole genome shotgun sequence Length of sequence - 8138 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 6, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 258 - 713 536 ## gi|262067352|ref|ZP_06026964.1| conserved hypothetical protein - Prom 805 - 864 9.8 + Prom 780 - 839 11.6 2 2 Tu 1 . + CDS 901 - 1113 190 ## gi|291461158|ref|ZP_06600286.1| riboflavin synthase alpha chain 3 3 Op 1 1/0.000 - CDS 1075 - 2283 889 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 4 3 Op 2 1/0.000 - CDS 2325 - 3599 1728 ## COG1114 Branched-chain amino acid permeases 5 3 Op 3 . - CDS 3626 - 3988 521 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 4016 - 4075 10.9 - Term 4046 - 4084 6.4 6 4 Op 1 . - CDS 4091 - 4996 996 ## gi|294781949|ref|ZP_06747281.1| conserved hypothetical protein 7 4 Op 2 . - CDS 5025 - 5837 936 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 5857 - 5916 5.5 8 5 Tu 1 . - CDS 5920 - 7353 1969 ## COG0591 Na+/proline symporter - Term 7711 - 7753 4.3 9 6 Tu 1 . - CDS 7833 - 8123 426 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606600|gb|ADGG01000010.1| GENE 1 258 - 713 536 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262067352|ref|ZP_06026964.1| ## NR: gi|262067352|ref|ZP_06026964.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 149 1 149 254 231 94.0 7e-60 MSELQTIRKKIQGDFFLEKSYKKGKLFYEVLRYKDDYIGINYGYLEDELREETYINDNRI GMIVVNEKDKIYICTLDEKRREVGITVTYHNKSGRLAHEIDYLDDICMATNRIYKDSFIK NAPLIKNLEKRENINKKYYKKYYEFKYKKIY >gi|292606600|gb|ADGG01000010.1| GENE 2 901 - 1113 190 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291461158|ref|ZP_06600286.1| ## NR: gi|291461158|ref|ZP_06600286.1| riboflavin synthase alpha chain [Fusobacterium periodonticum ATCC 33693] # 1 54 1 54 63 85 96.0 8e-16 MEILDKKSNRMSRANAGVFECNEFPDLQRILDFLSLRNLLSNELFFTFYEFATAYFIFLF FYNIIEFLFT >gi|292606600|gb|ADGG01000010.1| GENE 3 1075 - 2283 889 402 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 395 12 410 418 347 45 2e-95 MANVYDVLKERGYLKQLTHEEEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ QHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVETIDHNVECIKKQMQKFIDFSDGKAILE NNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRMENGLSFLEFNYMIMQGYDFYVLN KKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKTAKGALWLD PKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKKVLAYEVTK IIHGEEEATKAKEATEALFGSGNNLDNAPKIELGAEDFSKELLDVLVDRKILKTKSEGRR LIEQNGMSLNDEKITDVKFTLNENTLGLLKLGKKKFYNIVKK >gi|292606600|gb|ADGG01000010.1| GENE 4 2325 - 3599 1728 424 aa, chain - ## HITS:1 COG:FN0053 KEGG:ns NR:ns ## COG: FN0053 COG1114 # Protein_GI_number: 19703405 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Fusobacterium nucleatum # 1 424 1 424 424 597 87.0 1e-170 MYNMIDVVTAGFALFAMLFGAGNLIFPPMLGYELGSNWGVATIGFILTGVGIPLMGIIAS ANAGKDLDSFSNKVSPLFAKFYGIALILSIGPLLALPRTGATAYEVTFFHAGFTTSTVKY VYLIVYFLLALLFSLKSSEVVDRVGKILTPILLIVLFIILVKGVFFNSSTIVEKVYELPF KKGFVEGYQTMDALATIVFSTVILNAIRGKTKLTEKQEFSYLLKVGLIAALGLTIVYAGL SYIGATFGGTELVVGTEKTDLLVKISINLLGKIGYLILAICVAGACLTTSIGLIVTVAEY FSGLMKVSYQKLVVITTIIGFIFAMFGVNKIVIISVPVLVFLYPISIALILLNFFRVKNA NVFKGVVLVSGLVGLYEGISVTGIAMPEVFTNIYNSLPLVNLGLPWLVPALVVGIVCNFI KTEK >gi|292606600|gb|ADGG01000010.1| GENE 5 3626 - 3988 521 120 aa, chain - ## HITS:1 COG:FN0052 KEGG:ns NR:ns ## COG: FN0052 COG1393 # Protein_GI_number: 19703404 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Fusobacterium nucleatum # 1 120 1 120 120 159 85.0 1e-39 MKDIIFFCYPRCSTCQKAKKWLEENSIKFTERDIVKDKPTEKELKEFFKKSGKELKKFFN TSGILYRELELKDKLPTMTEDEMIKLLATDGKLVKRPMIVTKDFVLNGFKEEEWKEKLKK >gi|292606600|gb|ADGG01000010.1| GENE 6 4091 - 4996 996 301 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781949|ref|ZP_06747281.1| ## NR: gi|294781949|ref|ZP_06747281.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 301 1 301 301 317 100.0 6e-85 MVKTKREEKPELKFTKETEKKPKIKKIIKKIDSEEDEIADIRSILDTSDIETEEEIVRNR GDKGNKGNKVVNKGKKKTSPTTTPPTSRKKDSLEDQKKSVLKMIFITLFLLAIGILIYFL YQKFTSEDTESLILDKKGTVAEADADTTGDGSDADNVDDTEENTEGTETAKEEDKEEVKP KEKEVTKDTKEKAKPKEEAKKDNVAKSSDSSDIRTIDEVISQVMDKKNPDYLLKYNAEEL ALIRNTLYARRGLKYTKGKYKEYFEGKSWYKPSVTSGKDLLPEKEEKLVEIIRKYEKRAK K >gi|292606600|gb|ADGG01000010.1| GENE 7 5025 - 5837 936 270 aa, chain - ## HITS:1 COG:FN2118 KEGG:ns NR:ns ## COG: FN2118 COG2849 # Protein_GI_number: 19705408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 6 119 130 242 245 83 43.0 4e-16 MKNREYYTNGNLKAEYERNEHGEKEGYELLYYESGVLRAEYHYKADKLDGVTKEYYENGN LVAEGNYRNGMLEGLSRIYYESGKLKAESSYKNDALDGLCKMYYESGQVKAEYYYRDGSL EKTISSPKDNKDVKVDDKDFFDVDYEDGQLNLKLDLNTLLKSNLSKKDICKISYEDNELK LKIYDEDTKETKQIPIDKEKNVKVVQEETKKVEVKKAEVKKEEPKVQNLVSPKKETKKDE LEIPSFLKSRYENELEQEIEVKESESKKII >gi|292606600|gb|ADGG01000010.1| GENE 8 5920 - 7353 1969 477 aa, chain - ## HITS:1 COG:FN0107 KEGG:ns NR:ns ## COG: FN0107 COG0591 # Protein_GI_number: 19703455 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Fusobacterium nucleatum # 1 472 1 472 482 765 89.0 0 MASYEIFITFGIYLVFLMAIGVYFYSKTTTHESYVLGDRGVGYWVTAMSAQASDMSGWLL LGLPGAVYTSGLTEIWVVIGLALGTYLNWKFVAPALRVQTEKYNSLTVPSFISQKLNDKK GYIRTFSAIVILFFFTIYSASGLVASGKLFDSLLGIDYKWGVLIGGGTIIVYTFLGGYLA TCWTDFFQGCLMFFAIIVVPVAAYYSGGGIDGISTAMEAKDISLNIFKYTKVWSLPIIIS GLGWGLGYFGQPHIIVRFMSIDSADELWKSRLIAMIWVFISLLGAIAVGITGIGVFTDIS QMGGDAEKVFIFLIHKLFNPWMAGILFAAILSAIISTISSQLLVSSNTLTEDFYKHIVKR EKTHKEMIWVGRLCVIVIFLIASILAMNPSSKVLELVSYAWAGFGGVFSPVILFTLYKKE LHWKTVLVSMIIATITVITWKTSGLSNTLYEMVPAFVINSISIYLLEKFKVFGNNEK >gi|292606600|gb|ADGG01000010.1| GENE 9 7833 - 8123 426 96 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 94 286 378 405 120 59.0 6e-28 MVRNHKLARNIADVSWSEFNRILEYKAKWYGKTIVRVDKFFASSQICNCCGYRNEEVKDL SVREWTCPVCGAVHNRDINAAKNILKEGLRILSISV Prediction of potential genes in microbial genomes Time: Thu May 19 21:21:41 2011 Seq name: gi|292606599|gb|ADGG01000011.1| Fusobacterium sp. 1_1_41FAA cont1.11, whole genome shotgun sequence Length of sequence - 57035 bp Number of predicted genes - 55, with homology - 55 Number of transcription units - 21, operones - 13 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 - CDS 2 - 374 170 ## COG0675 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 298 - 645 309 ## COG0675 Transposase and inactivated derivatives - Prom 667 - 726 7.7 3 2 Op 1 . - CDS 1269 - 1976 821 ## HAPS_0513 filamentation induced by cAMP protein Fic - Prom 2151 - 2210 10.2 4 2 Op 2 . - CDS 2222 - 2644 724 ## FN0106 hypothetical protein - Prom 2672 - 2731 11.2 5 3 Op 1 . - CDS 2758 - 3204 461 ## COG0456 Acetyltransferases - Prom 3237 - 3296 6.3 - Term 3247 - 3293 8.2 6 3 Op 2 . - CDS 3300 - 4007 635 ## COG2992 Uncharacterized FlgJ-related protein - Prom 4156 - 4215 12.1 7 4 Op 1 . - CDS 4222 - 4548 422 ## FN1895 hypothetical protein 8 4 Op 2 11/0.000 - CDS 4564 - 5652 1380 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 9 4 Op 3 21/0.000 - CDS 5645 - 6664 1562 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 10 4 Op 4 . - CDS 6666 - 8252 202 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 - Term 8263 - 8321 1.4 11 4 Op 5 . - CDS 8343 - 9599 2077 ## FN1899 lipoprotein - Prom 9650 - 9709 10.7 + Prom 9819 - 9878 15.0 12 5 Tu 1 . + CDS 9930 - 10922 1208 ## COG3641 Predicted membrane protein, putative toxin regulator 13 6 Op 1 1/0.500 - CDS 11223 - 11876 758 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 14 6 Op 2 . - CDS 11889 - 12371 567 ## COG2131 Deoxycytidylate deaminase 15 6 Op 3 . - CDS 12442 - 15480 3412 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 16 6 Op 4 . - CDS 15498 - 17120 1672 ## Lebu_0003 protein of unknown function DUF1703 - Prom 17148 - 17207 16.6 17 7 Op 1 4/0.000 - CDS 17234 - 17764 604 ## COG0732 Restriction endonuclease S subunits 18 7 Op 2 . - CDS 17826 - 19163 1458 ## COG0732 Restriction endonuclease S subunits - Prom 19378 - 19437 6.1 19 8 Tu 1 . - CDS 19444 - 19644 213 ## FMG_0077 hypothetical protein - Prom 19709 - 19768 2.5 20 9 Op 1 2/0.000 - CDS 19825 - 21255 1645 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 21 9 Op 2 . - CDS 21266 - 22828 2220 ## COG0286 Type I restriction-modification system methyltransferase subunit 22 9 Op 3 2/0.000 - CDS 22847 - 24199 1452 ## COG0534 Na+-driven multidrug efflux pump 23 9 Op 4 1/0.500 - CDS 24189 - 24674 732 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Prom 24708 - 24767 11.1 24 10 Op 1 1/0.500 - CDS 24792 - 25619 929 ## COG0457 FOG: TPR repeat 25 10 Op 2 . - CDS 25641 - 26606 1336 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase - Prom 26653 - 26712 9.8 + Prom 26612 - 26671 7.9 26 11 Op 1 . + CDS 26707 - 27165 481 ## Lebu_0879 hypothetical protein 27 11 Op 2 . + CDS 27217 - 27672 499 ## FN1784 hypothetical protein 28 11 Op 3 . + CDS 27698 - 28159 426 ## Lebu_0879 hypothetical protein 29 11 Op 4 . + CDS 28186 - 28638 547 ## FN1784 hypothetical protein 30 11 Op 5 . + CDS 28669 - 29133 565 ## FN1785 hypothetical protein 31 11 Op 6 . + CDS 29156 - 29611 659 ## FN1784 hypothetical protein + Term 29615 - 29671 3.0 - Term 29601 - 29659 -0.3 32 12 Tu 1 . - CDS 29881 - 30345 600 ## FN1938 hypothetical protein - Prom 30375 - 30434 15.7 + Prom 30545 - 30604 3.2 33 13 Tu 1 . + CDS 30652 - 33228 1811 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 33262 - 33306 9.2 - Term 33381 - 33412 1.1 34 14 Op 1 5/0.000 - CDS 33418 - 34734 978 ## COG4268 McrBC 5-methylcytosine restriction system component 35 14 Op 2 . - CDS 34734 - 36764 2446 ## COG1401 GTPase subunit of restriction endonuclease 36 14 Op 3 . - CDS 36804 - 37247 665 ## gi|294781985|ref|ZP_06747317.1| hypothetical protein HMPREF0400_02217 37 14 Op 4 . - CDS 37288 - 37995 1029 ## PTH_0699 hypothetical protein 38 14 Op 5 . - CDS 38015 - 39214 1160 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 39 14 Op 6 . - CDS 39227 - 40174 793 ## Bmur_2442 lipoprotein - Prom 40361 - 40420 14.1 + Prom 40326 - 40385 8.2 40 15 Op 1 . + CDS 40407 - 41492 1623 ## COG2849 Uncharacterized protein conserved in bacteria + Term 41503 - 41535 2.4 41 15 Op 2 . + CDS 41561 - 42322 1017 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 42328 - 42357 2.1 - Term 42312 - 42347 3.1 42 16 Op 1 . - CDS 42358 - 45315 3724 ## COG3468 Type V secretory pathway, adhesin AidA 43 16 Op 2 1/0.500 - CDS 45366 - 46127 939 ## COG0708 Exonuclease III 44 16 Op 3 4/0.000 - CDS 46130 - 46573 571 ## COG0757 3-dehydroquinate dehydratase II 45 16 Op 4 1/0.500 - CDS 46554 - 47357 754 ## COG0169 Shikimate 5-dehydrogenase 46 16 Op 5 1/0.500 - CDS 47354 - 47611 376 ## COG1605 Chorismate mutase 47 16 Op 6 . - CDS 47577 - 48122 591 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 48331 - 48390 17.1 + Prom 48107 - 48166 25.0 48 17 Op 1 1/0.500 + CDS 48236 - 49483 966 ## COG0772 Bacterial cell division membrane protein 49 17 Op 2 1/0.500 + CDS 49535 - 49723 358 ## COG4224 Uncharacterized protein conserved in bacteria 50 17 Op 3 1/0.500 + CDS 49735 - 51123 1950 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 51 17 Op 4 . + CDS 51135 - 51683 729 ## COG1658 Small primase-like proteins (Toprim domain) + Term 51686 - 51724 4.3 + Prom 51691 - 51750 8.3 52 18 Tu 1 1/0.500 + CDS 51809 - 52348 807 ## COG2849 Uncharacterized protein conserved in bacteria + Term 52357 - 52404 6.3 + Prom 52367 - 52426 12.9 53 19 Tu 1 . + CDS 52485 - 52982 780 ## COG2849 Uncharacterized protein conserved in bacteria + Term 52989 - 53047 6.6 - Term 52983 - 53028 2.5 54 20 Tu 1 . - CDS 53039 - 53719 960 ## gi|294782003|ref|ZP_06747335.1| conserved hypothetical protein - Prom 53778 - 53837 11.4 - Term 53821 - 53873 14.6 55 21 Tu 1 . - CDS 53895 - 57035 4472 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|292606599|gb|ADGG01000011.1| GENE 1 2 - 374 170 124 aa, chain - ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 12 123 202 313 407 123 54.0 9e-29 MEEAIQNLNLRKIIENPKYLQKSLNKLATLQRRLSRKPKGSSNRNKARIKVARLFEKISN QREDFLQKLSTMLIKEYDIICMEDLQVKNMVRNHKLARNIADVSWSEFNRILEYKAKWYG KTIV >gi|292606599|gb|ADGG01000011.1| GENE 2 298 - 645 309 115 aa, chain - ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 107 1 116 407 119 51.0 2e-27 MEKAYKFRFYPTKTQIAILNCTFGCVRYVYNHFLSLKQELYNKEKKSMSYNQCSKILTVL KKDKEWLKDVDKFSLQNSLKDLDKAYKNFFSGRGYPKFKSKKDNRKSKIFTKIFE >gi|292606599|gb|ADGG01000011.1| GENE 3 1269 - 1976 821 235 aa, chain - ## HITS:1 COG:no KEGG:HAPS_0513 NR:ns ## KEGG: HAPS_0513 # Name: fic # Def: filamentation induced by cAMP protein Fic # Organism: H.parasuis # Pathway: not_defined # 8 198 7 199 220 78 29.0 2e-13 MYKIGLNRALMIANKMFEKLIYDISLSEGNSMTLLETASTLSGKVPKNTRVKDVVLLANL KNGYDYIFEKIKENNFYFDKETFCTENRLVASNDNFDNLGGFRQHNIRIVGAKHTGVAVP NLEKSFFEISNKYYDDKRVGIKIVDLFLDLCKNKYFGKGNTRTAQLMMCGLLVSEGYAPF SINFKDVEYSEALINFYDDENKRDIILKKLLNEQKEVTKSFLNKDELKIFKEKEI >gi|292606599|gb|ADGG01000011.1| GENE 4 2222 - 2644 724 140 aa, chain - ## HITS:1 COG:no KEGG:FN0106 NR:ns ## KEGG: FN0106 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 140 1 140 140 215 82.0 4e-55 MEAKKEFLRMINECDEIALATSIHDMPNVRIVNYYYDQDNNIMYFATYKGREKISEFWKN NNVAFTTIPMKKGVREQVRARGHVRESEKTIVDLREEFSNKMSDFAEIIDKYSEELKVYE IRFTEATVTLDSRTYEKISL >gi|292606599|gb|ADGG01000011.1| GENE 5 2758 - 3204 461 148 aa, chain - ## HITS:1 COG:FN2046 KEGG:ns NR:ns ## COG: FN2046 COG0456 # Protein_GI_number: 19705336 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Fusobacterium nucleatum # 1 148 1 148 149 214 77.0 6e-56 MELIHIENPNFEIMQKIIELEESAFEGAGNVDLWIIKALIRYGMVFVVKEGDKIVCIVEY MQIFNKKSLFLYGISTLKEYRHKGYANFILNETEKILKDLGYTEIELTVAPENQIAIDLY KKHGYKQESFLKDEYGTGIDRFMMKKIL >gi|292606599|gb|ADGG01000011.1| GENE 6 3300 - 4007 635 235 aa, chain - ## HITS:1 COG:FN1894 KEGG:ns NR:ns ## COG: FN1894 COG2992 # Protein_GI_number: 19705199 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Fusobacterium nucleatum # 33 235 1 203 203 294 83.0 8e-80 MKKYLLAVVFLCLSILSYSNDTEALDQDTNTGIITQAKDFAKVKGKSKKQIFIDTLIPTI EKVRNKIAEDKEYVKTLIEKEILTAEEKLYLEEMYTKYKVKSKSKTELVHKMVVPPTSFI LGQASLESGWGNSKLAKEGNNLFAVRSSLKDPEKTVYLGPNQYYKRYESLEESLMDYVMT LSRHSSYSNLRKAINNGEETIVLIKHLGNYSEMKNLYEQRLTQIITKNNLFKYDN >gi|292606599|gb|ADGG01000011.1| GENE 7 4222 - 4548 422 108 aa, chain - ## HITS:1 COG:no KEGG:FN1895 NR:ns ## KEGG: FN1895 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 107 1 107 109 144 76.0 1e-33 MKHTLKVAIIVLILVVISVILFVTGKRHDILIENNSMAGIKYSINGEPYKTLDAGKKALG ISKGVGNVIFIKTADNKVIEKELPSKNINLFINQAINNGDDWYKESEK >gi|292606599|gb|ADGG01000011.1| GENE 8 4564 - 5652 1380 362 aa, chain - ## HITS:1 COG:FN1896 KEGG:ns NR:ns ## COG: FN1896 COG1172 # Protein_GI_number: 19705201 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 23 362 1 340 340 535 93.0 1e-152 MDKNNKVKNFILDNSVPILILIMVAIMFPLSGLSGDYLVREMIERISRNLFLIMSLLIPI VAGMGLNFGIVLGAMGGQLALILVTNWHIMGLQGVFLAMILSIPFSILLGYVGGVILNRA KGKEMITSMILGYFINGVYQLVVLYSMGKIIPVSDRTLLLSSGRGIKNTVDLTEISKAVD NAIPLKIFGYDIPVLTLLFIVGLCFFIIWFRKTKLGQDMRAVGQDMEVSKSAGIEVNKVR IYSIVISTVLAGIGQVIYLQNLGTINTYNSHEQIGMFSVAALLIGGASVARATIPNAIGG VILFHTMFVVAPRAGKELMGSSQIGEYFRVFISYGIIALVLIIYEWRRKKEKEREREKAI GF >gi|292606599|gb|ADGG01000011.1| GENE 9 5645 - 6664 1562 339 aa, chain - ## HITS:1 COG:FN1897 KEGG:ns NR:ns ## COG: FN1897 COG1172 # Protein_GI_number: 19705202 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 1 339 1 339 339 542 93.0 1e-154 MLKKFGLPRLIILIFLVSTYIIAPFVGIPITTALSDTIIRFGMNAILVLSLMPMIESGAG LNFGMPLGIEAGLLGSLISIELGFTGFVGFVLAILMAIVFAFIFGWAYGAILNKVKGGEM MIATYIGFSSVAFMCIMWIILPFKRPDMIWAYGGSGLRTTISVETYWKGVLNNVFGKISQ AIPVGEIIFFLLLAFIMWVFFRTKAGLSMSAVGKNEKFAQATGINADKSRKQSVIISTVI AAIGIVVYQQSFGFIQLYLAPFNMAFPAIAAILIGGASVNRVTIWHVMIGTFLFQGILTM TPTVVNAVIKTDMSETIRIIVSNGMILYALTRKDGGSRG >gi|292606599|gb|ADGG01000011.1| GENE 10 6666 - 8252 202 528 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 278 504 12 221 318 82 29 5e-15 MVSNTLLKIENLSKSFGENTVLKDINLELNEGEILGLVGENGAGKSTLMKIIFGMDVIRE TGGYNGKISFEGKEVNFASPFEALNAGIGMVHQEFSLIPGFKVSENIVLNRESIKNNVVT HFFGDSISKIDQKENLKRTQEAISKLGVNLTGQEQISEMAVAYKQFTEIAREIEREHTKL LVLDEPTAVLTEDEAEILLETMKKLSAKGIAIIFITHRLNEIMAVSDKVTVLRDGQLINT VPTKSTNVNEITEWMIGRKVNSSSDAKKVAHDELETLLEIRDLWVDMPGEMLKGLNLDIK KGEILGLGGMAGQGKIAVANGIMGLFKSKGDIKYKNEALVLNKPTYPLEKGIFFVSEDRK GVGLLLDESIERNIAFPAMQIKKQFFKKFLGLFNVIDDKAVTENAKKYIEKLEIKSMGEK QKVGELSGGNQQKVCVAKAFTMEPDLLFVSEPTRGIDVGAKQLVLETLKEYNRERNTTIV VTSSEIEELRSICDRIAIINEGKVAGILPASAGILEFGKLMSGIKEGE >gi|292606599|gb|ADGG01000011.1| GENE 11 8343 - 9599 2077 418 aa, chain - ## HITS:1 COG:no KEGG:FN1899 NR:ns ## KEGG: FN1899 # Name: not_defined # Def: lipoprotein # Organism: F.nucleatum # Pathway: not_defined # 3 415 1 414 416 754 90.0 0 MKIKRILFSILAVFMFVLVAACGKKEAPTEDANAQKEGATTEVTQNYHIGVVTTSVSQSE DNARGAEAVVKQYGASNEGGKITVVTIPDNFMQEQETTISQMVSLADDPEMKAIVVAEGI PGTYPAFKAIREKRPDILLIVNNTHEDPVQVSSVADVVVNSDSVARGYLIVKTAHDLGAT KFMHISFPRHLSYETISRRRAIMEQTAKDLGMEYIEMSAPDPLSDVGVPGAQQFILEQVP NWIAKYGKDIAFFATNDAQTEPLLKQIAANGGYFIEADLPSPTMGYPGALGIEFTDDEKG NWPKILEKVEKAVVEAGGSGRMGTWAYSYNFSGIEGLTDLAVKSIESGDKDFTLDKVLAS LDTATPGSKWNGSLMKDNNGVEVKNSFFVYQDTYVFGKGYMGVTSVEVPEKYGKISGN >gi|292606599|gb|ADGG01000011.1| GENE 12 9930 - 10922 1208 330 aa, chain + ## HITS:1 COG:FN1900 KEGG:ns NR:ns ## COG: FN1900 COG3641 # Protein_GI_number: 19705205 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Fusobacterium nucleatum # 1 330 1 330 330 470 92.0 1e-132 MKNFFIKSLNGMAFGLFSSLIVGLILKQIGTLFNIEFLTYLGGFSQLLMGAGIGVGVAYA LESHVLILIASAITGMYGAGSINFVEGQAILKVGEPMGAYFSVIFGLLIAKRIAGKTKFD IILLPMTTIIFGCLLGKFFAPYISAVISEIGIIVNKTTELRPILMGLTMSVIMGIILTLP ISSAAIGISLGLSGLAAGASLTGCCCQMIGFAVMSYDDNDLGTVFSIGFGTSMIQIPNII KNPMIWIPPIVSSAILGVLSTTVFNLSSNSIASGMGTSGLVGQIASFSVNGMSYLPTMII LHFLLPAIITFIVYKILKKKGYIKPGDLKI >gi|292606599|gb|ADGG01000011.1| GENE 13 11223 - 11876 758 217 aa, chain - ## HITS:1 COG:FN1901 KEGG:ns NR:ns ## COG: FN1901 COG0664 # Protein_GI_number: 19705206 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 1 217 1 217 217 284 77.0 8e-77 MLEALSKSVIFSKIKNEEIKEILEETKHEIKTYSPNEQIAFRGDEVKGLYVILNGTLSTE MLTEEGNVIKIEELVKSDVIASAFIFGSKNCFPVDLKAKEKAEVLYIERKEFLKLLFSQE QILENFLNEVSNKTQLLTTKIWNNFNNKTIKKKFCHYVNRKQEKGEFIIENLGALAEFFG VERPSLSRVLSDLVKDEKLERIGRNRYKILDKEFFEI >gi|292606599|gb|ADGG01000011.1| GENE 14 11889 - 12371 567 160 aa, chain - ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 1 160 14 173 174 296 86.0 1e-80 MRENYIDWDSYFMGIALLSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPW EREGDFLETKYPYVCHAELNAILNSIKSLKDCIIYVALFPCNECSKAIIQSGIKEIVYLS DKYDGTDTNRASKKMLDSAGVKYRQFTPNMDKLEIDFKNI >gi|292606599|gb|ADGG01000011.1| GENE 15 12442 - 15480 3412 1012 aa, chain - ## HITS:1 COG:XF2725 KEGG:ns NR:ns ## COG: XF2725 COG0610 # Protein_GI_number: 15839314 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 6 1010 10 1006 1007 1110 57.0 0 MSSVDYNMLISTLESTVVTEYIREDIPAYSYQSEADLEREFIKNLQNQGYEYLSIHNEKE LIANLKDKLEKLNNIIFSEKEWERFFKEKIANKNDSIVEKTRTIQEDYIKSFTRDDGSLV NISLINKKNIHNNFLQVINQYEEEGGNHNTRYDVSILVNGLPLIHIELKRRGVVIREAFN QINRYQRDSFWAGSGLFEYVQIFVISNGTNTKYYSNTTRARHIKEMSFNRKKVKKSSNSF EFTSYWADANSKSITDLVDFTKTFFAKHTILNILTKYCIFDTSETLLVMRPYQISATERI LSKIQLANNYKWVGKIDAGGYIWHTTGSGKTLTSFKTAQLASQLDYIDKVLFVVDRKDLD SQTQKEYDRFSKGSANGNTSTKILKAQLEDKYENKSKIIITTIQKLGHFIKQNKNHEVFR KNIVLIFDECHRSQFGELHLAIAKTFKNYFMFGFTGTPIFPKNSNGSSKTLFKTTEQTFG DKLHTYTIVNAINDGNVLPFRIDYINTIKEKENIQDKKVNAIDIEKAMSDPNRIKEVVSY IIDHFEQKTMRNKHYELKDQRLSGFNSIFAVSSIPVAKKYYFEFKKQLKEKNKDLRVATI FSYLVNEEENTDNLDDESFDTENLDLGSREFLEEAISDYNKMFGTNYDTSSDGFQLYYEN LSKRTKDKEIDILIVVNMFLTGFDATTLNTLWVDKNLRMHGLIQAFSRTNRILNSIKTFG NIVCFRDLQEETDEAIALFGNKEAGGIVLLKTYEDYYNGYQDDKGREKEGYSQLIEELQS KFPLSEQITGESNKKEFVILFGNILKIKNILSAFDKFAGNEILSEREFQDYQSIYLDMYQ EIRPKNKEKEIINDDIIFEIELIKQVEINIDYILMKVTEYYKSNKEDKEILIDIKKAINS SLELRSKKELIEGFIERVNSSKNITDDFQKFVREEKEKDLEKVIEEEKLKPEETKKFIDN SLRDGNFKTTGTDIDKLLPPVSRFSSGNRGIKKQGVIDKLKGFFDKYLGLTV >gi|292606599|gb|ADGG01000011.1| GENE 16 15498 - 17120 1672 540 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 540 3 545 545 593 60.0 1e-168 MKRLAIGIDDFRKIIKEDCYYVDKTKFIEAVLEDASNVKLFTRPRRFGKTLNMSMLKYFF DVRDSEENRKLFNGLDIEKSKYINEQGKYPTILISLKSIKYETWEESLEQLKSLVSNLYN EFEYIRECLNESEIELFNDIWFKKENGEYANSLKNLTSFLYKYYKKEVILLIDEYDIPLI TAHKYGYYDEIINFYKIFLGEALKTNQYLKMGVLTGIIRVIRTGIFSDLNNLKVYSILEK KYSDFFGFTEEEVKKALQYFNIEEELANVKYWYDGYKFGNSELYNPWSIINFLDGRELKN YWVGTSENFLIKNILENSTSRTNEILDKLFNEEEVEEAIIGTSDLSILMDSKEVWELLLF SGYLTVKEKLDDDIYSLKLPNMEVKKLFKKEFINVHFGISLFRKTMEALKNLNFNDFEKY FQEIMLKSTSNWDTSKEAFYHGLSLGMLSYLDNDYYVTSNFEAGFGRYDVVLEPKNRNDR AFILEFKVAEAENKLEKLSKEAIKQIEEKKYDINLKSKEIKEITSVGIAFYGKKLKVSYK >gi|292606599|gb|ADGG01000011.1| GENE 17 17234 - 17764 604 176 aa, chain - ## HITS:1 COG:HI0216 KEGG:ns NR:ns ## COG: HI0216 COG0732 # Protein_GI_number: 16272178 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Haemophilus influenzae # 1 173 212 384 385 236 67.0 2e-62 MCRRILKSETNSIGGIPFFKIGTFGKREDAYISIEKFYEYKEKYPYPKKGMILISTSGTI GRTVVFDGKPAYYQDSNIVWIDNDEERVLNKYLYYFYQTNPWKIDIGGTIERLYNENIEK TSIPLPPLEEQQRIVDILDRFDRLCNDISEGLLAEIEARQKQYEYYREKLLSFKKL >gi|292606599|gb|ADGG01000011.1| GENE 18 17826 - 19163 1458 445 aa, chain - ## HITS:1 COG:jhp0726 KEGG:ns NR:ns ## COG: jhp0726 COG0732 # Protein_GI_number: 15611793 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori J99 # 1 416 1 443 454 275 38.0 1e-73 MSKLDELIKELCPNGVEYKKLGELGTLYNGLTGKNKNDFIEGNQKYITYVNVFNNISIDI ETQDKVKIDRNEKQNKVEYGDVIFTASSENIEDVGMTSVLTNLIEEDLYLNSFCFGFRFS TDIMLPSFSKYLFRSENLRKQIRKTANGVTRYNISKEKIKEILVPILPLKIQEEIVRILD DYTKSVEELKEKLNKELIARKKQYSWYRDYLLKFENKVEKSKLSEVATIKARIGWQGLTK EEYLITGNYYLITGTDFQNGEINLKNCYYVNEERYIQDKNIQLKNDDVLVTKDGTLGKVA YVSNLDKPATLNSGIFVIRSIDTNKLLNRYLFHYLKAPYLMKYAQNKLTGGTIKHLNQNV IVDFEIPLPPLEVQKRIVEVLDNFEKICNDLNIGLPAEIEARQKQYEFYRNFLLTFNNEE IYALSKQASKQASKQASKQASPKSN >gi|292606599|gb|ADGG01000011.1| GENE 19 19444 - 19644 213 66 aa, chain - ## HITS:1 COG:no KEGG:FMG_0077 NR:ns ## KEGG: FMG_0077 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 2 60 6 64 344 68 55.0 9e-11 MEEVKFLLYSYLEDDVNIGVIVKNDTLWLTQKNMAELFGVGVPAISKHLKKIYESEELEK IRLFPK >gi|292606599|gb|ADGG01000011.1| GENE 20 19825 - 21255 1645 476 aa, chain - ## HITS:1 COG:MA2369 KEGG:ns NR:ns ## COG: MA2369 COG2865 # Protein_GI_number: 20091201 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 1 385 1 378 510 123 28.0 6e-28 MDNKIRLFVSSQENQYFERKSARVEPLDILKHLVAFANADGGSLVIGVEDNGEITGFNNS KAHKIDEFKNMTVTKLRDTPILPKYEIFDVKNKKGEEDKILVISVEPAYDRVIKSYDNNV YLRQFDKTEKLNHEQITQLEYDRGQRYFEDEVVEDSSIEDIDLELVESYRKNMNLTNSNL EDILKARNFIKKGLLTNACVLLFAKEPTKYLPQARLKFVRYDGTKAGVGTEINIIKEITF DKAIPRIITEVKEFIKTQLREFQYLDRKDGNFKLMPEYPEFAWFEGVVNALTHRNYSIRG EYIRFIMFDDRIEIQSPGRLPNIVTIENILTQRYSRNPRIARVLSEFGWVKEMNEGVKRI YSEMEKFFLKKPVYSEPGNNVLLVLENNILNRNVRIKDNLKKLINKDIYKKLNLIEKEII KFSFMNKKITTTDLTKKLNKSGLTTRKYLKKLVELGILEWHGTSARDPKQYYTLKK >gi|292606599|gb|ADGG01000011.1| GENE 21 21266 - 22828 2220 520 aa, chain - ## HITS:1 COG:XF2728 KEGG:ns NR:ns ## COG: XF2728 COG0286 # Protein_GI_number: 15839317 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 1 518 1 522 525 733 67.0 0 MDNKKEQERAELHRTIWSIANDLRGSVDGWDFKQYVLGILFYRYISENLTTYINKGEIEA GNPDFNYADLSDEDAIVAKEDLIATKGFFILPSELFVNVRKRADKDENLNVTLHNIFTNI ENSANGTESENDLKGLFDDIDVNSNKLGGTVAKRNENLVNLLNGVGDMKLGDYQENTIDA FGDAYEYLMGMYASNAGKSGGEYYTPQEVSELLTKLTLVGKTEVNKVYDPACGSGSLLLK FAKILGKDNVRNGFFGQEINITTYNLCRINMFLHDIDFDKFDIAHGDTLTEPAHWDDEPF EAIVSNPPYSIKWEGDASQILINDSRFSPAGVLAPKSKADLAFIMHSLSWLAPNGTAAIV CFPGVMYRSGAEQKIRKYLIDNNYIDCIIQLPDNLFYGTSIATCIMVMKKAKTDNKVLFI DASKEFVKVTNSNKMTEKHINDIVEKFTKRENVEYISNLVDYEKIVEENYNLSVSTYVEK EDTSEKIDIVELNKEIQRIVAREEELRKEIDKIIAEIEIK >gi|292606599|gb|ADGG01000011.1| GENE 22 22847 - 24199 1452 450 aa, chain - ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 449 10 458 459 677 87.0 0 MLDKTSFRKSVLTFLLPIAIQNLINVAISSTDVIMLGRYSEVALSASSLAGQVQFILILL FFGIASGATVLTAQYWGKKDIKSIEKVLAIGIKIAFFVSIGFFVFAFFFSRTAMRLFSND EATILQGIRYLKIVSFSYLTTSISIVYLVTMRSVERVGVSTVAYATSFVSNLIINYLLIY GNFGFPEMGVEGAAIGTLVARIIELGIVFYYNSKNHHFVSIKWKYIKSLDPVLKKDFFKY SAPTMMNELLWAGGTAAGIAILGRLGTSIVAANSITSVVRQLAMVFAFGLANTAAVMVGK EIGKKDFHTAEIYAKKLLFYSFLSSLVGVALLYIAKPFIISKFALNAEVEDFLNHTINVL FYYIPLQSISAVLIVGVFRAGGDTKFALISDAIPLWCGSVLLSAIGAFYLGLSTKLVYIL IMSDEIIKLPLIIWRYRSRKWINNITRELK >gi|292606599|gb|ADGG01000011.1| GENE 23 24189 - 24674 732 161 aa, chain - ## HITS:1 COG:FN1788 KEGG:ns NR:ns ## COG: FN1788 COG0245 # Protein_GI_number: 19705093 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Fusobacterium nucleatum # 1 157 1 157 160 273 94.0 1e-73 MLRIGNGYDVHRLVEGRRLMLGGVEVLHTKGVLGHSDGDVLLHAITDAIIGALGLGDIGL HFPDNDENLKDIDSAILLKKINNIMKEKNYRIVNLDSIIVIQKPKLRPYIDSIRDNIAKI LEIEPELVNVKAKTEEKLGFTGDETGVKSYCVVLLEKDNVR >gi|292606599|gb|ADGG01000011.1| GENE 24 24792 - 25619 929 275 aa, chain - ## HITS:1 COG:FN1787 KEGG:ns NR:ns ## COG: FN1787 COG0457 # Protein_GI_number: 19705092 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 16 241 16 226 628 154 46.0 1e-37 MGKKENDDLLKVIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYS NSTKGKYYRDRGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIE DYSRAIELSPYSVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIEEGWVTYRYYHARGEL YYYLGEYEKAIEDYSKAIEHYSIETDLFPLRIDYYIDRGDAYYCLKEYEKAIKDYSCALE FKSICEEVEDLEKIISGHLDSDFKKHRKQEQLDNF >gi|292606599|gb|ADGG01000011.1| GENE 25 25641 - 26606 1336 321 aa, chain - ## HITS:1 COG:FN1786 KEGG:ns NR:ns ## COG: FN1786 COG2870 # Protein_GI_number: 19705091 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Fusobacterium nucleatum # 1 321 3 323 323 530 90.0 1e-150 MIKKLIENFKNIKIAVIGDLMLDEYIMGKVERISPEAPVPVVKVIEEKFVLGGAANVINN LAALGANVYCGGLVGNDNNAEKLINAFPKNVDCNLILKADNRPTIVKKRVIAGHQQLLRL DWEEEFSINEEEENIIIENLKNHIKELDAIILSDYNKGLLTKSLSQKIINLCRENNVIVT VDPKPKNITNFVGASSITPNKKEAYLAVDANSREDIDIVGKKLKEQYKLDTVLITRSEEG MTLYDEGIHNIPTYAKEVYDVTGAGDTVISVFTLARAAGATWEEAAKIANAAGGIVVGKI GTSTVSEKELISTYNNIYNNN >gi|292606599|gb|ADGG01000011.1| GENE 26 26707 - 27165 481 152 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0879 NR:ns ## KEGG: Lebu_0879 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 151 1 156 159 94 35.0 9e-19 MKKIILGLFLILGALSFASPSFVDVNKIKQNSYEIYEEEEDFFTFVKSTDEAGISVTFIV IEGVSPKEVSDIVKSNTPDNQQFLNSINNKRAYVNKFANNENGGFTYNFVAKNTKIKDCY ISILYATDSELSPTELNNAVDKILNEVESYLK >gi|292606599|gb|ADGG01000011.1| GENE 27 27217 - 27672 499 151 aa, chain + ## HITS:1 COG:no KEGG:FN1784 NR:ns ## KEGG: FN1784 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 151 1 151 151 84 34.0 1e-15 MKKIILGLFLILGVISFAIPKNLDANKLKKAGYEITSEEENAIIFGKSTQTAGITVALFN GATSPKNINISLRETAPKSQKFLSSRENKRAYISKYKDNEYNGFTYSFVAKNSKSKDIVV SVLYMTDKELKDAELDKTIEQTLNEIESFLK >gi|292606599|gb|ADGG01000011.1| GENE 28 27698 - 28159 426 153 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0879 NR:ns ## KEGG: Lebu_0879 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 152 1 156 159 84 30.0 1e-15 MKKLILGLFLILGAVSFAAPKFIDTTKLQKAGYTIIEDSETVLTIVNTDIVDGDSILVAS FYLSDKTPKELSDAIKAEAQQQEAKFVASFDNNRAYVNEFKHVDFYSFTIVPKKQKINKY HIYVTYMSPKKLSKEDIDKVINATLNEAESLIK >gi|292606599|gb|ADGG01000011.1| GENE 29 28186 - 28638 547 150 aa, chain + ## HITS:1 COG:no KEGG:FN1784 NR:ns ## KEGG: FN1784 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 150 1 151 151 77 32.0 1e-13 MKKIILGLFLILGAVSFAVPSFIDTTKLQKSGHDIIQDEANLFTIGSPKEDTALVISYYL TDKNPQELSDAIKANAPAGEVKFLSAINNDQAYVNEFQSENFYSYVVVPKKQKLGKFKIY VTYATVQKLPKDAINSTVKSVINEAEGLIK >gi|292606599|gb|ADGG01000011.1| GENE 30 28669 - 29133 565 154 aa, chain + ## HITS:1 COG:no KEGG:FN1785 NR:ns ## KEGG: FN1785 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 154 1 157 157 80 38.0 2e-14 MKKIILGLFLILGAMSFAAARGLDINKVNKAGYQLSKQDDFSAIIDKMTDTEGTSIAIFF EIVENDAAKELFNGAKKSAPEVLKLVNTSETKRAYIAKYKGTDGPYFSYAFISKKLKFKD TFTTVIYTTDKDLNGSELDKVANSFFNQVESFLR >gi|292606599|gb|ADGG01000011.1| GENE 31 29156 - 29611 659 151 aa, chain + ## HITS:1 COG:no KEGG:FN1784 NR:ns ## KEGG: FN1784 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 151 1 151 151 233 84.0 1e-60 MKKLILGLFMILVASSYAVPSFVNSKRAEERGYKIVSDSEGTISMQKVDDESATTISYWY GFKNPDVAELNKILKEDASTDLQNKDSLKMGKAYVEKYVDGENFMYTIVFRNAKPADVLT SIAYYTRKEIPKNELNKYVDKLLAESEKYIK >gi|292606599|gb|ADGG01000011.1| GENE 32 29881 - 30345 600 154 aa, chain - ## HITS:1 COG:no KEGG:FN1938 NR:ns ## KEGG: FN1938 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 154 1 151 155 135 48.0 3e-31 MGIFIVAIFSLLIGYLSIGIAKISGEKANEIKKYLENNKENLLETKGTLELIKIEGGTNS HSFDVKIEFKNQDGKVFSYDETYTPSDSKVSFLWKCENKGKVAVTVIYNKRNPNKHYIKE LKELEVSENSKIVETIIGGLFILAGLCTIYVGIK >gi|292606599|gb|ADGG01000011.1| GENE 33 30652 - 33228 1811 858 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 6 857 5 811 815 702 44 0.0 MMSPNQFTENTITAINLAVDISKGNMQQSIRPEALALGLLMQNDGLIPRVIEKMNLNLKY IISELEKEMSNYPKVEVKVSNENISLDQKTNSILNRAEMIMKEMEDSFLSVEHIFKAMIE EMPIFKRLGISLEKYMEVLMNIRGNRKVDNQNPEATYEVLEKYAKDLVELAREGKMDPII GRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLD MGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKP MLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTISILRGLKDKFETYH GVRITDTAIVEAATLSQRYISDRKLPDKAIDLIDEAAAMIRTEIDSMPEELDQLTRKALQ LEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDIAKIKNIKREIEN VKLEMEKAEREYDLTKLSELKYGKLATLEKELQEQQNKVDKDGKENSLLKQEVTADEIAD IVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAVRAVADTMLRSVAGLKDPNRPM GSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEE GGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTS NIGSHLILEDPALSENTRERVADELKARFKPEFLNRIDEIITFKALDLEAIKEIVKLSLK DLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANEVHE KSNVLIDLDDNHIVFKEI >gi|292606599|gb|ADGG01000011.1| GENE 34 33418 - 34734 978 438 aa, chain - ## HITS:1 COG:YPO0388 KEGG:ns NR:ns ## COG: YPO0388 COG4268 # Protein_GI_number: 16120722 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Yersinia pestis # 69 397 65 388 438 186 31.0 9e-47 MNKIIQLKEFQNIISKKDYENEGNKYLPEKDFKELISFIEEFVGSEEETDVMDFMKVYKT KDRNLGTVVKVNNYVGLIQLKSGYKIEILPKIDFTDDEENNKTKAIFLKMLKSLKDFSGK NFKNADLKISKMNLYEIFINMYLNDVRTLVKNGLKSTYVTKEDNIKFYKGKLQVSQHIKM NLAHKEKFYMSYDEFLVDRAENRLVKATLLKLQKLTSSSQNSKEIRQLLIAFELVEASTN YEKDFSKVSIDRNTKDYINLMRWSKVFLFNKSFASFSGKVSSRAILFPMEKIFESYVAQQ VRKKFLPDNWEVSIQDKGYHLFDEKNEKNSRPIFSLRPDIVLRKENKIVILDTKWKRLIP ESRKNYGISSVDMYQMYAYAKKYEENGIIPEIYVIYPKTKDMIETKYFESNDGVKVNIFF IDLANVEESLEELRNMIE >gi|292606599|gb|ADGG01000011.1| GENE 35 34734 - 36764 2446 676 aa, chain - ## HITS:1 COG:DRB0143 KEGG:ns NR:ns ## COG: DRB0143 COG1401 # Protein_GI_number: 10957435 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Deinococcus radiodurans # 168 676 474 963 969 245 31.0 2e-64 MDNKKEKGLLLTWKPEVSVWDYEKVYSEIQNGKKVKTTGWRTRTLQEVKIGMEVFIMKLG EEPKGIIAHGHVVKGLYLKNETYYVDIEFDSIQNADDEKEIISLTELKNRFKTKTWDSQG DAVGSYIDETILPELREMWNKLINREENSKTSNGGDEKETMKNEFDKNVIFYGPPGTGKT YTTAKRAVEICKTESEEDLIDYSEIMKKYNELKENNRIEFITFHQSYGYEEFIEGIKPIV LNEDDEAENESENNQESKTDIKIENDVKYKIEAGIFKKFCDNAKKAIIESKSNIYISPKA IVWKVTVKDKVKEDCFTNNHVRINFKLGTAGASKFDNEIKKGDIIITTDGSRTKINGIAV VTDDKAYTLNKAQSDTTTRNVDWLVKGINEDIYEINDEKILPRKTVTKVPNMKVEDIIKL AKEKESIVLSKEELSKIDIKENKEPYVFIIDEINRGNISKIFGELITLIEPTKRSGKKEC ISTKLPYSKKEFTVPDNVYIIGTMNTADRSIALMDTALRRRFKFEEMLPDYHLLEDIFVE DKGVKVNIGAMLKVINERIEYLYDREHTIGHAVFLEKMENDKIDIDINKLENIFKKNIIP LLQEYFYEDYEKIRIVLGDNAKDEDEQFILAVSIPKDIFEGDIGDIDIPEKKYIINYDNF KNIMAYKNISKKLSDE >gi|292606599|gb|ADGG01000011.1| GENE 36 36804 - 37247 665 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294781985|ref|ZP_06747317.1| ## NR: gi|294781985|ref|ZP_06747317.1| hypothetical protein HMPREF0400_02217 [Fusobacterium sp. 1_1_41FAA] # 1 147 1 147 147 262 100.0 5e-69 MENTKVKGLLLSWKPEVSVWDYEKVYSDIQNGKKVKTIGWRTRALQEVKIGMEVFIMKLG EEPKGIIAHGHVVKGPYLENETYYVDIEFDSIQNTNNEKEIISLAELKNKFKSKTWDSQG DAVGSYIDETILPELKEMWDELVKKDK >gi|292606599|gb|ADGG01000011.1| GENE 37 37288 - 37995 1029 235 aa, chain - ## HITS:1 COG:no KEGG:PTH_0699 NR:ns ## KEGG: PTH_0699 # Name: not_defined # Def: hypothetical protein # Organism: P.thermopropionicum # Pathway: not_defined # 5 232 193 428 434 119 34.0 9e-26 MGKKYSKEEIIKKLEESKSEMGQFYSENFLNYISETSDKEGDYTEIIAGWLLDNIELFDD IEMISRKSNYKVKTHDGVIKNEGSKREEEKIAMKLFELSQNQGKVFDIIGKIIDYQTPLK NIRADKAGKIDLLAYNEEEKTLRILELKKPDSEETMLRCVLEAYTYLKVVDKDKLLKDFG LPEDTEIKACAFVFYDGKQHQEMKDDREKLEELIEKLDIEVIYLKEENGEYSVVI >gi|292606599|gb|ADGG01000011.1| GENE 38 38015 - 39214 1160 399 aa, chain - ## HITS:1 COG:PAB1035 KEGG:ns NR:ns ## COG: PAB1035 COG0595 # Protein_GI_number: 14521766 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Pyrococcus abyssi # 61 397 163 507 516 87 26.0 3e-17 MEINIIRGQNQIGGSIIEVSSKNTKIILDVGSNLDDKEIVVPEIEGLFKGKAKYDGALIS HYHSDHVGLATRILPEIPIYMGEKSYEIHKVTREYIKKEYLKEPKTFKADEEFLIGDIKI TLYLCDHSAFDSHMFLLECEGKKILYTGDFRSNGRKFFQSLLNKLPKVDALITEGTNLSN NKIGKINLTEKELEKRGIELLEGNDRPVFVLMAGTNIDRIVTLYKIANATKRLFLIDTYV GVITDTIGGNIPNPRTFSNVRIFLTNQDKYEILKNYPKNKIWKSKIAKSNFLMCIRASMK KYLESYPNEFSFEGCILFYSMWEGYKKQEDTKEFLEFMEEKGVKVISLHTSGHADEKDFD KLIKKVEPGIIIPIHTENSEWFKRYENCEVICDKNIIKI >gi|292606599|gb|ADGG01000011.1| GENE 39 39227 - 40174 793 315 aa, chain - ## HITS:1 COG:no KEGG:Bmur_2442 NR:ns ## KEGG: Bmur_2442 # Name: not_defined # Def: lipoprotein # Organism: B.murdochii # Pathway: not_defined # 23 306 2 269 789 236 49.0 7e-61 MKKLLLLLFMLILSISASSKNFKYHPKTKAELQELIENERVYLGDIDTSAITDMSYLFIK EKNKIDACGTTYEYITTKRKNFSGIGKWDTSNVTDMEGLFYKMKDFNEDISAWNTSKVEN MSSMFEDADSFNRSLNNWDVSKVKTMKNMFRGATSFNQPLNKWNVGEVMDMEEMFEAAYK FNQNINSWNVSKVKNMSYMFNSAKEFNQPLNNWNVSSVEDMTCMFRYTKKFNQPLNSWNV SKVKYMEEMFFEAVSFNQSLNRWNVSNVKDMARMFCDAKKFNQDLSMWKVQGATDTVNMF LGSPLENRKPKWEGQ >gi|292606599|gb|ADGG01000011.1| GENE 40 40407 - 41492 1623 361 aa, chain + ## HITS:1 COG:FN2119 KEGG:ns NR:ns ## COG: FN2119 COG2849 # Protein_GI_number: 19705409 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 361 1 337 338 207 42.0 2e-53 MKKSLIALFILTSVLAFSEGNIKKVPYESMTRNDNGIAYFGNEKTPFTGIVEKKSKDGKL EAVISLKDGKLEGKTFTYYPNGKVKREETFQNALVNGAVKSYSENGILEYEANYKNDKKD GLEKTYYPNGKVEKEISYKNGKIDGLSRHFSDKGILLAEAYFTEGQPNGISKEYYPSGKL MSEQTFLMGSLNGPAKLYYESGKIKISSNYKNDVLDGKSSQYQENGKLVEELSYQYNQLN GLIKMYDKDGKLEYETQYVNDKRNGLSKKYYPNGKLLSEVNFKDDKEVGIMKAYYESGKL QGEVPYKDGLIDGTVKFYHENGKLNEETVFKNGKKNGTLKLYDENGKLERQANFVDDKQV N >gi|292606599|gb|ADGG01000011.1| GENE 41 41561 - 42322 1017 253 aa, chain + ## HITS:1 COG:FN0048 KEGG:ns NR:ns ## COG: FN0048 COG0647 # Protein_GI_number: 19703400 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 252 1 252 252 377 81.0 1e-104 MKTYLIDLDGTMYSGNTNIDGAREFIAYLQEKGLAYIFLTNNATRTKTQAKEHMLNLGFK NIKEEDFFTSAIATAKYISKNYSERKCFMLGESGLEEALKEENFIFVEDKADFVVVGLDR KANYTKYSEALHHILAGAKFIATNSDRLLANNGTFDLGNGATVNMLEYASGVEAIKVGKP YQTILNILLEDKNLKKEDIILLGDNLETDIKLGYEGNIETIMVCSGVHDENDIERLKVYP TKVVKNLKELIRD >gi|292606599|gb|ADGG01000011.1| GENE 42 42358 - 45315 3724 985 aa, chain - ## HITS:1 COG:YPO3984_2 KEGG:ns NR:ns ## COG: YPO3984_2 COG3468 # Protein_GI_number: 16124111 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 680 985 169 476 476 140 33.0 2e-32 MKKSKKVFGLFAFLLVCGNINAGSVGAPEEYPGIRYDYNNVNVSLPVFNFTENLTNGGNY IRVGGNSTLDIASDLNINLTSNIPISYSPGVYGNAVGLGAFGKNNGAPTINAKNVKIKVE AGAADGNNAPRGMVMYDGAKYFGENIDINLITNSTTEGNDVIGLDFGTNDENLVGNPSNT VMNVKDINIKIENNQVVIPAGGEQNTLVGLWQYGEKNQTSSFTSTGNLNIEIDDKTNKAS YHTSVGIIVAGDSAAKMTLNNSNIKIKSKADNDYYGGAIVLGYPDYEAATTGQGATLESK GKMVLDTTEAPDVATLNLHGHGSLFKADFENSSTEIKSGGTAIRFAGVSQEFINEGEDTK PGRDLTISLKNAKITTSATAPYSAPLIVVEDGVKNATFNLSGPGSIAKAAEKNNLLSVKG KADVTLNISDGAKASGTITRGSSGEITTNITNNAVWSVPANSGSTYSSNLTLKNGGTLNL SDESHPHTSGINYYEVKVFGSKTDDGKLVNDNGVITMANTSYNDEVEIYGNYEGKNGAKI KMNTLWNAPGDANGTNSKSDILKILQGGSSKLGNATGVTEIVPVALDGRVNIIEGNIQKV AQAVNTVPVVVADKAVAGTFVGTAQTTGAGEVQLTSKLNSNGQRVFFWTLNALDGTNPYD DGTSKNYRLGKARTILNSSVAGYINTAKVNMDSGFTSLSTLHERRGENALDVNNRKGQAW ARIIGQHSKDEGKERFNYETDIYGVQAGYDFNIKNSEDGNRYTGLYFTNTAANTDFYDRY RAENGIIVSDKYTGKVKTKDFSLGLTTTKYYNNGFYLDLVGQLSFINNKYNSRDGVSAKQ RGNALAFSVEGGKNYGLGSNWTIEPQAQLIYQYLNLKDFNDGVREVHYGNDSALRARLGF RTTYKKSFYSIANVWHDFSNTTEANIGSDVVKEKYSATWGEIGLGVQLPITNSAYVYSDI RYERSFTSNPKHKGYRGTVGFKYTF >gi|292606599|gb|ADGG01000011.1| GENE 43 45366 - 46127 939 253 aa, chain - ## HITS:1 COG:FN0047 KEGG:ns NR:ns ## COG: FN0047 COG0708 # Protein_GI_number: 19703399 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Fusobacterium nucleatum # 1 253 1 253 253 480 93.0 1e-135 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLELKGYHQYWNYAEKK GYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELLRLDYRM VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKFTELLES GFIDTFRYFYPDLEHAYSWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEIHAQTEGS DHCPVVLFLDFKK >gi|292606599|gb|ADGG01000011.1| GENE 44 46130 - 46573 571 147 aa, chain - ## HITS:1 COG:FN0046 KEGG:ns NR:ns ## COG: FN0046 COG0757 # Protein_GI_number: 19703398 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Fusobacterium nucleatum # 1 147 1 147 147 249 83.0 1e-66 MKIMVINGPNLNMLGIREKNIYGTFTYEDLCKYIETYPNYKEKDIDFTFLQTNHEGEIVN FIHKAYTEKYDGIVLNAGGYTHTSVAIHDAIKAVSIPTVEVHISNIHAREEFRKVCMTSP ACVGQITGLGKLGYVLAVVYLTEERKK >gi|292606599|gb|ADGG01000011.1| GENE 45 46554 - 47357 754 267 aa, chain - ## HITS:1 COG:FN0045 KEGG:ns NR:ns ## COG: FN0045 COG0169 # Protein_GI_number: 19703397 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Fusobacterium nucleatum # 19 267 1 249 249 351 81.0 8e-97 MRKFGLLGKKLSHSLSPLLHKVFFEKFGVEAEYKLYEVEETEIDKFKSYMLENSIEGVNI TVPYKKVFLDKLDFISDEAKAIGAINLLYIKDNKFYGDNTDYYGFKETLISNQIEPSEKK IAIIGRGGASASVYKVLKDMEAEDITFYFRKDKLSEIEFPENIEGDIIINTTPVGMYPNI KDNIVDEQILKKFKIAIDLIYNPLETKFLKIARENGLKTINGMEMLIEQALKTDEILYDI VLSNQLREKIIKKIIKRVKEFYENNGN >gi|292606599|gb|ADGG01000011.1| GENE 46 47354 - 47611 376 85 aa, chain - ## HITS:1 COG:FN0044 KEGG:ns NR:ns ## COG: FN0044 COG1605 # Protein_GI_number: 19703396 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Fusobacterium nucleatum # 1 85 2 86 86 79 70.0 1e-15 MTELELMRKKIDEIDEKLLVLFKERLEVSKQIGILKKKYKMSIFDPEREKQIISEATEAM PDNEKKYTESFLHNLMDISKEVQSE >gi|292606599|gb|ADGG01000011.1| GENE 47 47577 - 48122 591 181 aa, chain - ## HITS:1 COG:FN0043 KEGG:ns NR:ns ## COG: FN0043 COG2849 # Protein_GI_number: 19703395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 26 181 3 158 158 183 57.0 1e-46 MKIKKISFLLILLFSINLLAANSKNKNIFDTSKLNVAKTQVLNGPVKTYHKNGKLKSKEY YVNNKKSGIWQYYHENGKLKSEAIFNTLSQDEEAIVKTYDEKGVIISSGKVVNGEMVDIW TYYDEMGRKLNTYDLKKGVIITYSEKGKVILQVSEKALLNRLEEIMVEVNNDRARANEEK N >gi|292606599|gb|ADGG01000011.1| GENE 48 48236 - 49483 966 415 aa, chain + ## HITS:1 COG:FN0042 KEGG:ns NR:ns ## COG: FN0042 COG0772 # Protein_GI_number: 19703394 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 1 413 1 415 417 410 61.0 1e-114 MKRKLDFNNRATDQVAIHNKINEINKEKEKERKEKIKKRRNNIIAFFVILVLIGTLNFIS SISRFDNAKVLEKGIKQLTILFASFIIFFIMRTKKIADFFDKNIRGKGFRTLFLIISLFI FGFIAYWPSSIFPTINGGKGWIRLGGLSIQVPELFKVPFVIAISTIFARGKDTKEKIPYI VNFCSVFLYTSIFALVISFALHDMGTAIHYIMIAAFMIFLSDISNKFLTFIISFLILLGS SVFYYTLKFSSGYKQHRLKVYLEGILHNNYDISDAYQIYQSLIAFGTGGIFGKGIGNGVQ KYNYIPEVETDFAIANLAEETGFIGMIAVLFSFFSLFVLIMSVAAKSKTFFHKYLVSGIA GYIITQVIINIGVAIGLLPVFGIPLPFISAGGSSILALSLSMGYIIYINNYHTAD >gi|292606599|gb|ADGG01000011.1| GENE 49 49535 - 49723 358 62 aa, chain + ## HITS:1 COG:FN0041 KEGG:ns NR:ns ## COG: FN0041 COG4224 # Protein_GI_number: 19703393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 62 1 62 62 73 96.0 9e-14 MEMKDIIAKVNYYAKLSKERKLTEEEIKDREIYRRMYLDQFKAQVKKHLDSIEIVDEKDF KN >gi|292606599|gb|ADGG01000011.1| GENE 50 49735 - 51123 1950 462 aa, chain + ## HITS:1 COG:FN0040 KEGG:ns NR:ns ## COG: FN0040 COG0017 # Protein_GI_number: 19703392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Fusobacterium nucleatum # 2 462 1 461 461 891 98.0 0 MMITVKDIFRHGEDYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENF DEISRLSIASTIKVKGTLVKSEGSGQDLEVKAKEIEIFQKADLEYPLQNKRHTFEYLRTK AHLRARTNTFSAVFRVRSVLAYALHKFFQENNFVYVHAPIITGSDAEGAGEMFRITTLDL NKVPKKENGEVDFSKDFFGKSTNLTVSGQLNLETFCAAFRNVYTFGPTFRAEYSNTARHA SEFWMVEPEIAFGDIFALMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVL NNDFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKKPVFVTDYPKDIK AFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDSYELLSKRMKELGLNEEDYEFYLDLR RFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRTPNNAEF >gi|292606599|gb|ADGG01000011.1| GENE 51 51135 - 51683 729 182 aa, chain + ## HITS:1 COG:FN0039 KEGG:ns NR:ns ## COG: FN0039 COG1658 # Protein_GI_number: 19703391 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Fusobacterium nucleatum # 1 180 1 180 183 315 96.0 2e-86 MKKKIKEVIVVEGKDDISAVKNAVDAEVFQVNGHAVRKNKSIEILKLAYENKGLIILTDP DYAGEEIRKYLCKHFPNAKNAYISRISGTKDGDVGVENASPEDIITALEKARFCLDNSEN IFNLDLMIDYNLIGKDNSADLRALLGAELGIGYSNGKQFMAKLNRYGISLEEFKKAYNKI IK >gi|292606599|gb|ADGG01000011.1| GENE 52 51809 - 52348 807 179 aa, chain + ## HITS:1 COG:FN0026 KEGG:ns NR:ns ## COG: FN0026 COG2849 # Protein_GI_number: 19703378 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 179 1 155 155 166 57.0 3e-41 MCSALSFSAKVIKATDIDVKGNVVYEAGQNAPYTGFIETYNEKNVLEARTEFKNGIQDGS SKIYFPNGKLSSEATFQNGKQVGPQKDYYENGKLKIETTYKNGQQTGPAKAYDENGKLVT EFNLVNGKAEGLVKTYYPSGKLRTEENYKNDERNGLAKAYDENGNLVQQATFQNGKQVK >gi|292606599|gb|ADGG01000011.1| GENE 53 52485 - 52982 780 165 aa, chain + ## HITS:1 COG:FN0026 KEGG:ns NR:ns ## COG: FN0026 COG2849 # Protein_GI_number: 19703378 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 11 165 1 155 155 197 70.0 1e-50 MKKILLALFVMCSALSFSAKVIKSSNIEVKGNVVYEAGQNAPYTGVLENYDEKGVLDARA EFKNGVMDGYSKLYYPSGKLSSEATFKNGVQVGIQKDYYEDGKIKMELNYKNGKPEGLGR SYYPNGKVFIEENYKNGERDGVAKAYDENGKLMQQATFKNGQQVK >gi|292606599|gb|ADGG01000011.1| GENE 54 53039 - 53719 960 226 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782003|ref|ZP_06747335.1| ## NR: gi|294782003|ref|ZP_06747335.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 226 1 226 226 427 100.0 1e-118 MKKGIRILAFMLLAIFFTGCFASNVDVKGQKIYAREYKGMKIELSRSDLSGIFVDIQNMS NLDIAIIWKESTLGGSRIIRHDAIVYPALNDENTVLTELQRRTFVIHRAEDFYYVDPVLY AQSGVRIKPLKYPVELKLVIRTNGAKETLSIFLDNNYRSDENAKSERYQEDAYTKQRKVD AKNLDKDYQKTKINRRDKADDLPDAKVVKENPPVQDELYINHRTKK >gi|292606599|gb|ADGG01000011.1| GENE 55 53895 - 57035 4472 1046 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 64 938 1316 2234 2712 140 27.0 2e-32 GNVDGTPTSTLVKSGDEVVFKAGDNLTVKQDLSAGKQEYTYKLNKDLVGLDSVTTKKITI PGATAGTNDVVIDKDGISAGNKVIKNVAPGVNPTDAVNVSQLTKLGTNTIQLGGDNASVT ATQQLDKTGGIKFNIVGENGIVTKATGDKVTVGVDTSTIGANIKLKYKSNSDAATAKDVK LSDGLDFKNGKFTTASVGANGEVKYDTVTQGITVTDGKATVPTTDGLTTAKDIANVVNNL GWKANIATVGTGEIATGTTPSAQLVKNGSTVSYIAGNNMIVNQVVDAAGNHNYTYSLNKQ LKALESAEFINPTSGNKTVVNGDGLTVTPATPGAKNISITKDGISAGDKKITNVADGDIT PTSKDAINGSQLYKLASNTISLGGDGATSTNTQQLNKNGGIKFHIVGDNGIITEANNDKV TVKVNTATIGNNITLKYAANGANAQTVKLSDGLNFQDGNFTKATVDTQGKVKYDTVTQAI APTTDGKAQVTPGSTPGLATATDVVNAINNTGWKATAGGNVTGTATPTVVKNGQEVEFKA GDNLKVKQTIDPTTGKQTYEYSLAKDLTGLNSAEFTNAAGDKTKITAGSTEYTNAAGDKT VVNSDGITISSSTPGAKDISVTKNGISAGDKVIKNVAAGVNPTDAVNVSQLKDVDNKVTN VNNTINKGLNFKGNTGATVNKQLGDTLEIVGEGNKADSEYSGENIKVVENGGKLVVKMDK NVKSETITANTVNTNTVAVGMPGKDGVITVKDANGKDGVSINGKDGSIGLNGKDGSSATI STVQGNPGAAGTPGSTMDRIQYTDKSGTPHQVATLDDGMKYGGDTGAVINKKLNQQVNVV GGITDTNKLSTKDNIGVVSDGSNNLKVRLAKDLDGLESVTVKNASGNSTVVNGNGVTITS PSGDTVSLSDKGLDNGGNVIKNVAAGKDGTDAVNVDQLNKTVSNVVNAAGDAVAQVNNKV DKLGDRVNKGLAGAAAMAGLEFMDIGINQATVAAAVGGYRGTHAVAVGVQAAPTENTRIN AKVAMTPGSRTETMYSIGASYRFNWR Prediction of potential genes in microbial genomes Time: Thu May 19 21:22:49 2011 Seq name: gi|292606598|gb|ADGG01000012.1| Fusobacterium sp. 1_1_41FAA cont1.12, whole genome shotgun sequence Length of sequence - 916 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 914 1164 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|292606598|gb|ADGG01000012.1| GENE 1 2 - 914 1164 304 aa, chain - ## HITS:1 COG:HI1731a KEGG:ns NR:ns ## COG: HI1731a COG5295 # Protein_GI_number: 16273668 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Haemophilus influenzae # 16 178 762 942 1020 73 42.0 4e-13 GKVKYDTVTQGITVTDGKATVPATDGLTTAKDIANVVNNLGWKANAGGNVDGTSTSTLVK SGDEVVFKAGDNITVKQDLSAGKQEYTYKLNKQLKDLTSAEFKTAAGDKTVINGDGLTIN PVTPATAPISVTKDGISAGNKVIKNVAPGVNPTDAVNVSQLTKLGTNTIQLGGDNSTVTA TQQLDKTGGIKFDIVGANGITTEAKNGTVTVKVDSATIGSNSKLKYTANGATPKQEVTLA DGLNFQDGKFTKASVDTAGKVKYDTVTQGITVTDGKATVPATDGLTTAKDIANALNNLGW KANA Prediction of potential genes in microbial genomes Time: Thu May 19 21:22:50 2011 Seq name: gi|292606597|gb|ADGG01000013.1| Fusobacterium sp. 1_1_41FAA cont1.13, whole genome shotgun sequence Length of sequence - 1118 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1118 1385 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|292606597|gb|ADGG01000013.1| GENE 1 2 - 1118 1385 372 aa, chain - ## HITS:1 COG:HI1731a KEGG:ns NR:ns ## COG: HI1731a COG5295 # Protein_GI_number: 16273668 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Haemophilus influenzae # 3 152 67 236 1020 63 40.0 9e-10 GANGAVKYDVKTTSLTSTDGKVNTPATNNLVTANDVANAINNAGWKANAEAIGTGAKTGT PSAQLVKNGSTVTYVAGDNLTVKQDVTSGDHKYTYSLNKDLTGLDSVTTKTITIPGATPG TNDVVINKDGISAGNKVIKNVAPGVNPTDAVNKSQLDKIGDNEIKLGGDNASSTTGQKLS KSGGLKFNVVGTTDEIVTVASGDQVKVGLAQAVKDNINNKADKNLSNITNAGKDVIKDTA AWKVKANSNPAETVKGGDEVVFKDGAGVKITQSGKEFTISADTSKISQATKISYTANGTT PKQEVSLADGLNFQDGKFTKASVDTAGKVKYDTVTQGITVTNGKATVPATDGLTTAKDIA NVVNNLGWKANA Prediction of potential genes in microbial genomes Time: Thu May 19 21:22:57 2011 Seq name: gi|292606596|gb|ADGG01000014.1| Fusobacterium sp. 1_1_41FAA cont1.14, whole genome shotgun sequence Length of sequence - 16812 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 8, operones - 6 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 4592 6134 ## COG5295 Autotransporter adhesin - Prom 4618 - 4677 8.5 + Prom 4834 - 4893 18.9 2 2 Op 1 1/0.000 + CDS 5058 - 5291 310 ## COG2849 Uncharacterized protein conserved in bacteria 3 2 Op 2 1/0.000 + CDS 5317 - 5859 644 ## COG2849 Uncharacterized protein conserved in bacteria 4 2 Op 3 1/0.000 + CDS 5875 - 6708 907 ## COG2849 Uncharacterized protein conserved in bacteria + Prom 6772 - 6831 12.3 5 3 Op 1 1/0.000 + CDS 6904 - 7734 1131 ## COG2849 Uncharacterized protein conserved in bacteria + Term 7745 - 7788 6.2 6 3 Op 2 1/0.000 + CDS 7797 - 8627 752 ## COG2849 Uncharacterized protein conserved in bacteria 7 3 Op 3 1/0.000 + CDS 8685 - 9518 1129 ## COG2849 Uncharacterized protein conserved in bacteria + Term 9533 - 9575 3.1 8 3 Op 4 . + CDS 9588 - 10508 1115 ## COG2849 Uncharacterized protein conserved in bacteria + Prom 10525 - 10584 5.6 9 4 Op 1 59/0.000 + CDS 10612 - 11046 741 ## PROTEIN SUPPORTED gi|237738730|ref|ZP_04569211.1| LSU ribosomal protein L13P 10 4 Op 2 . + CDS 11062 - 11463 656 ## PROTEIN SUPPORTED gi|237738729|ref|ZP_04569210.1| SSU ribosomal protein S9P + Term 11490 - 11525 5.1 - Term 11475 - 11511 -0.7 11 5 Tu 1 . - CDS 11734 - 12057 119 ## gi|294782015|ref|ZP_06747347.1| hypothetical protein HMPREF0400_02248 - Prom 12134 - 12193 12.7 12 6 Op 1 . - CDS 12232 - 12627 479 ## gi|294782016|ref|ZP_06747348.1| hypothetical protein HMPREF0400_02249 13 6 Op 2 . - CDS 12666 - 13058 496 ## gi|294782017|ref|ZP_06747349.1| hypothetical protein HMPREF0400_02250 - Prom 13098 - 13157 11.7 + Prom 13051 - 13110 13.9 14 7 Op 1 . + CDS 13299 - 13820 276 ## PROTEIN SUPPORTED gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 15 7 Op 2 1/0.000 + CDS 13848 - 14597 1099 ## COG0500 SAM-dependent methyltransferases 16 7 Op 3 . + CDS 14616 - 14924 356 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 14929 - 14977 1.0 - Term 14916 - 14964 6.1 17 8 Op 1 24/0.000 - CDS 15045 - 16091 919 ## COG0208 Ribonucleotide reductase, beta subunit 18 8 Op 2 . - CDS 16072 - 16557 496 ## COG0209 Ribonucleotide reductase, alpha subunit 19 8 Op 3 . - CDS 16602 - 16811 208 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606596|gb|ADGG01000014.1| GENE 1 2 - 4592 6134 1530 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 243 1415 245 1400 2712 75 22.0 1e-12 MNNKERDEKFLKSWLKKKISITTSTVVSFLITGVVGGGTAYGVNANGSGNGTAVAVGTQS NSTNGGVAVGRKAQATGNEGAVAVGVESTTREYGVAIGYKAGQENGTPGVASHSNITIGA NTRVGVKGSTDSVGQSIAIGSSQGIGAWAKGTQAIAIGSDTIAEGNSSVAIGGDDVDTAI AKTKSYVKKSYDKNGTETSTAVNNTSLDDIYKDLTGNSVGLGGYKGTTAGEASVALGVKA EAGDLATALGTMSQAKGINSLALGTGAQATQANAVAIGAGSSTDGLKAKRITDANVALSD GTTVNFANFAGTSGVTEGDMVSFGTVGRERQLKNIAPGELSATSTDAATGSQLYSVAKKL SEDINSKFRYVSIKSNDAGNKLNDGATANNAIAIGPNASTKVESGVSLGDGANIVPGPTK DKAGTLLQTVITSGSGVAIGKSATATQAGIAIGDTSTTVTSGIAIGREAKVNNKYETASG SYAKGDSQDGYMQYDRIQNPDNLVYSSEPTVNNVFSPDRYNGQGIAIGYKAESNVFGTSL GNSAVAKMGGLALGTYSKATGATATAIGLGANSSGARGISMGRQASATTADSVAIGTGAR GGASSAGGSVAVGGGAAATGTQAIAIGGLYGNDLYSSSATKDGAGNLTKNTQASGEASIA MGVNTKATGKQALAMGADAQATSEAALAVGVNAVSNKGIAIGKNSTSGGFSSSISLGTNA TSNVGGIAIGENATAQSKSIVIGSGTRTPGPGTVVIGDDAGIGSASGKSAKGDNSIAIGK GAGKNSDANTYLYNTITIGAHSKVGETGKARVSQSIAIGGVADLEANKGGATWARGDQSI AIGGDVKSLGDSSIAIGGDDLDLVATSSSSYEKKIFDKNGNQVGSTVTVSKNLNQIFSSL TGRGELLNFKGTSSIDGRRYERYQGTEAGQGAVALGVKAKAGDIALAIGTMAEATGLNSV AIGTGAQTPQANAVAIGGGSTTVGTQGRQITDADVTLTDGTTMNYGGFAGAKNVEEGSMV SFGREGKERQLKHIAPGEISATSTDGINGSQLYAVAKKLGEGWKADAGGNKIGSSTLTSV KPGNTVVYSAGSNLQVKQTIDTTNGKQTYEYSLNKDLTGLDSVTTKKITIPGTGGKDTVI DNNGINAGNNKITNVAPGVNGTDAVNKNQLDQKIGDNTIKLGGDKGTTGTQNLSKAGGLQ FNIKSGDGLETSASGTDVTVQLDTVTKQKLNKAVLPLKFSGDDYDPFDELSTVVSKELGQ KLEIVGGADTTDPTKLSNNNIGTMVDGTGKINLKLAKELTGLTSAEFKTAAGDKTVINGN GLTITPVASGAAPISVTKDGISAGDKKITNVAPGTISATSKDAINGSQLYNLASNTIQLG GDKGTTGTQQLDNAGGIKFDIVGANGITTEAKNGKVTVSVDPSKLSAGNSKLSYTANGAA PKQEVSLADGLNFQDGTLTTAKVGANGAVKYDVKTTSLTSTDGKVNTPATNNLVTANDVA NAINNAGWKANAEAIGTGAKTGTPSAQLVK >gi|292606596|gb|ADGG01000014.1| GENE 2 5058 - 5291 310 77 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 69 1 55 263 68 60.0 2e-12 MKKILLILLSLSAVLFSACGEVKYEFKNGIMYADGKKATGTFEFKVGSDNKGKGTFVNGI PDGIFERYYFKWKHFKR >gi|292606596|gb|ADGG01000014.1| GENE 3 5317 - 5859 644 180 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 180 84 263 263 139 44.0 4e-33 MFDLSSEKGFSLFFDDGQLVMISDFQTEEISNYYENGNPLLVTSRRAKRVLYSEDKEVLS KMENEILVDVGTTLKPLDDGSFEILKDNKLVGKIANNGIETYFYSTGEKLMIYDPIAKDT EIFFKNGNTFYKRNNETAKYFYKDGKIFFEAYRGQWRFFDREGKEMVTNSDNITDIKKID >gi|292606596|gb|ADGG01000014.1| GENE 4 5875 - 6708 907 277 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 23 276 10 262 263 241 50.0 1e-63 MRKILLVLLLLLLLPISISAKEKYEFKDGILYSDGKKVTGTFEFISGKNKAKGSFVNGLP DGIFERYYPDGSIMLKNTFVAGIRMTEETYYKGGKLFIKFSKKDDSLKVFYENGNLVLSR SIKTGIYIIYHENGKPLMVSNGNISTLYNENNEILFKLNGDESLDNQGDLEELKDGSYQL VKNNKVIATLDASGMIVTFLYSTGEPLMRVNDNNGLLQIFFKNGNVFFEANGNNFRINYK DGKPLYKTDKITEIFFNKDGEEIPNNLEKVIGIRKVK >gi|292606596|gb|ADGG01000014.1| GENE 5 6904 - 7734 1131 276 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 276 1 263 263 320 62.0 2e-87 MKKILSTLLLIFAMLLSACGGVKYEFKDGLMYGDGKEATGTFEFKSGKNKVKGNFVNGSP DGIFEKYYSDGNIMLKDAYVGGVNVAEELYYKGGQLMGAFSEAESLRLFYENGSIVMSVN PQTGETVVYHENGVPLMAILGGSAVIFNENNEMLFRIDNEQAVDLGATLTQLEDGSYQLV KDDKVIAKIDANGEVGTYLYSTGEPLMRFNSANGLSEIFFKDGTVLFESDGNNFTLNYKN GKPLYEAKGDSWKFFSTDGEEIISNFEVITDIKKLD >gi|292606596|gb|ADGG01000014.1| GENE 6 7797 - 8627 752 276 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 16 276 3 263 263 268 55.0 6e-72 MKKVLLIFLLLFLIPLSSCGKAKYEFKDGIMYENGKEASGTFELTINGFKSKGKFINGLA DGLLEVYYLDGSIMKKTLFSNGVHLKDEVYYRNGKLMSTYLKDKRIDIFYDDGQLVMSFN FQTGESSSYHENGNPLMIGNSYETTLYNENNEALFEVKNGESIDIGTTLKELEDGTFEIL KDNKIIAKVDAKGETITYLYSTGEKLMTSSSVSGDTEIFFKNGKTFFKGNTENAKWFYKD GKLLYESNNGEWKFFDREEKQIMSNFDEITDIKKID >gi|292606596|gb|ADGG01000014.1| GENE 7 8685 - 9518 1129 277 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 277 1 263 263 308 65.0 8e-84 MKKILSALLLIFAMLLSACGGVKYELKDGLMYDADGKEATGTFEFKTGKYKVKGNFVNGL PDGLFEEYYEDGSIMAKETFVNGEMTSKELFYKNGNLLGNFTENDDIKLYYDDGSLILSY DAEKEESIYYHENGNPLMIGNSYETTLYNENNEVVSKLKDDNLTDIGATLKKLDDGTFEL VKENEVIAKIDVNGEIINYLYSTGEPLLKVNENMGETEFFFKNGNTFMKGKEGGSILNYR DGKPLYEIDGDSETIYNEEGDKIVGGFDLVTDIKKLD >gi|292606596|gb|ADGG01000014.1| GENE 8 9588 - 10508 1115 306 aa, chain + ## HITS:1 COG:FN0248 KEGG:ns NR:ns ## COG: FN0248 COG2849 # Protein_GI_number: 19703593 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 306 1 308 308 456 84.0 1e-128 MKKGIILLALIFTACVNLDNIGGNSGGEVKEIKNTNISTSKNYERKNGSLYVDNVLANGK QEYKEKNGVIIKGNYKEGLADGLQERYYPSGKLYGKINIINNKVEGTETTYYENGKIISE LNYTQGKLISGKIYYENGDLLSKIEGKKITIFYSSGKKLFSMDKTDLAVYHENGKEVFSN SDEGIRINGEPAKKSLLDMFSKENLVKTALYLLTSDTIQAEYKSGKPSIQLKGTTAVMYY PSGKILLELSPSIDGTVNSKIYYENGQLMQVEDRSKNARSVKVYDKAGNLIAENIFNKDH EIKQIY >gi|292606596|gb|ADGG01000014.1| GENE 9 10612 - 11046 741 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738730|ref|ZP_04569211.1| LSU ribosomal protein L13P [Fusobacterium sp. 2_1_31] # 1 144 1 144 144 290 98 6e-78 MKKYTFMQRKEDVVREWHHYDAEGQILGRLAVEIAKKLMGKEKVTFTPHIDGGDYVVVTN VEKLVVTGKKLNDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKNKLGRQQ LTRLRVFVGTEHSHTAQKPNKVEL >gi|292606596|gb|ADGG01000014.1| GENE 10 11062 - 11463 656 133 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738729|ref|ZP_04569210.1| SSU ribosomal protein S9P [Fusobacterium sp. 2_1_31] # 1 133 1 133 133 257 99 4e-68 MAEKITQFLGTGRRKTSVARVRLIPGGQGVEINGKGMDEYFGGRAILSRIVEQPLALTET LDKYAVKVNVVGGGNSGQAGAIRHGVARALVLADDSLKAALREAGFLTRDSRMVERKKYG KKKARRSPQFSKR >gi|292606596|gb|ADGG01000014.1| GENE 11 11734 - 12057 119 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782015|ref|ZP_06747347.1| ## NR: gi|294782015|ref|ZP_06747347.1| hypothetical protein HMPREF0400_02248 [Fusobacterium sp. 1_1_41FAA] # 1 107 1 107 107 189 100.0 4e-47 MTFNEAQEKLISEYSRDAIPEETSIRSKYYTLVTKDREIGKHKNFIVDTKSKKPFSGRIL HEGKHSNTRVEELVKNRNIVVLLLYFPQGKTRSDYISIEQTLDYLII >gi|292606596|gb|ADGG01000014.1| GENE 12 12232 - 12627 479 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782016|ref|ZP_06747348.1| ## NR: gi|294782016|ref|ZP_06747348.1| hypothetical protein HMPREF0400_02249 [Fusobacterium sp. 1_1_41FAA] # 1 131 1 131 131 209 100.0 5e-53 MKKIFLLCLFVILSLGAFAQKVKSDGKAHFDKILWELWMTEASIEKLEQSYLFQIVKIDN DYYLTDSYYPKEQKKKIKKADRSGYEKLKIYKDIYLIDNDGNIYAYDLAKKKPVIVDKDL NILKYCQVYHD >gi|292606596|gb|ADGG01000014.1| GENE 13 12666 - 13058 496 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782017|ref|ZP_06747349.1| ## NR: gi|294782017|ref|ZP_06747349.1| hypothetical protein HMPREF0400_02250 [Fusobacterium sp. 1_1_41FAA] # 1 130 1 130 130 238 100.0 1e-61 MKKFFMFCLFMILSLGVFAQKLNTDGNPNFDQLVGVKFTKPYYEDGENYDGVYYCTITKK GNDYHIKGKMLLMGIEEIATINMKLKVYKKIYLEDEWGQLYAYDTNKKTLVLMESKENLN VMLYFRRASK >gi|292606596|gb|ADGG01000014.1| GENE 14 13299 - 13820 276 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 [Mesoplasma florum L1] # 3 171 2 169 170 110 39 5e-24 MDKIILVKPDLSYTDEIIKYKEESLAESSIINGSAGLDRFSSIEIWFEELKKRSCEDTVP KGLVPSSTYLGIREKDNYIVGMIDIRHYLNEYLTQVGGHIGYGVRKTERNKGYAKQMLKL ALEKCKELKIKKVLITCDEDNIASEKVILSANAKLEDIRNVDGENKKRFWIDL >gi|292606596|gb|ADGG01000014.1| GENE 15 13848 - 14597 1099 249 aa, chain + ## HITS:1 COG:FN1919 KEGG:ns NR:ns ## COG: FN1919 COG0500 # Protein_GI_number: 19705224 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 249 1 249 249 454 86.0 1e-128 MSYQDINAATIDRWIKEEDWEWGRAISHEDYIKALNGEWDVKLTPVKFVPHEWFGDLKGK KLLGLASGGGQQIPIFTALGADCTVLDYSDEQLASEKMVAEREKYKVNIVKADMTKALPF EDESFDIIFHPVSNCYIESVEPVFKECYRILKKGGILLCGLDTIINYILDENFEKVVFSM PFNPLKNEEHREFLKKMDCGYQFSHSLSEQLGGQLKAGFILTNIEDDTNGEGILHEMNIP TFIMTRAIK >gi|292606596|gb|ADGG01000014.1| GENE 16 14616 - 14924 356 102 aa, chain + ## HITS:1 COG:BS_ydfQ KEGG:ns NR:ns ## COG: BS_ydfQ COG0526 # Protein_GI_number: 16077618 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Bacillus subtilis # 11 100 13 104 112 67 34.0 5e-12 MEKIKTYNDLLEKIKNEEKFLLYIKSEGCSVCEADFPKVKEITDKNNYLAYYIQADEMTE AVGQLNLYTAPVVILFYNGKEIHRQARFIDFSELDYRIKQTL >gi|292606596|gb|ADGG01000014.1| GENE 17 15045 - 16091 919 348 aa, chain - ## HITS:1 COG:FN0103 KEGG:ns NR:ns ## COG: FN0103 COG0208 # Protein_GI_number: 19703451 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Fusobacterium nucleatum # 1 348 1 348 348 650 97.0 0 MKAVVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKV DLTQDKNDYENLTLPEREAYDGILSFLIFLDSIQTNNIPNISDHVTAPEVNMLLAIQTFQ EAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKV IIANYLLESLYFYNGFNFFYLLASRNKMVGTSDIIRLINRDELSHVVLFRSIVKEIKNDY PEFFSAETIYSMFKTAVEQEINWTEHIIGNRVLGITSQTTEVYTKWLANERLKSLGLEPL YSGFNKNPYKHLERFADTEGEGNVKSNFFEGTVTSYNMSSSIDGWEDF >gi|292606596|gb|ADGG01000014.1| GENE 18 16072 - 16557 496 161 aa, chain - ## HITS:1 COG:FN0102 KEGG:ns NR:ns ## COG: FN0102 COG0209 # Protein_GI_number: 19703450 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Fusobacterium nucleatum # 18 161 612 755 755 291 97.0 2e-79 MEPATLALVGCQSWEVQLVEANGLRNGELTAIAPNTSTSLLMGSTASVTPTFSRFFIEKN QRGAIPRTVKHLKDRAWFYPEFKNVNPISYVKIMAKIGSWTTQGVSMEMVFDLNKDIKAK DIYDTLITAWEEGCKSVYYIRTIQKNTNNISEKEECESCSG >gi|292606596|gb|ADGG01000014.1| GENE 19 16602 - 16811 208 69 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 1 68 348 415 416 100 76.0 2e-20 IPIYDKENLQEYVFSGKRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRGEL NTPKRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:20 2011 Seq name: gi|292606595|gb|ADGG01000015.1| Fusobacterium sp. 1_1_41FAA cont1.15, whole genome shotgun sequence Length of sequence - 4401 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 233 - 376 119 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 2 1 Op 2 . - CDS 423 - 2258 2150 ## COG0209 Ribonucleotide reductase, alpha subunit 3 1 Op 3 . - CDS 2258 - 2494 286 ## FN0101 glutaredoxin - Prom 2546 - 2605 10.8 + Prom 2546 - 2605 11.0 4 2 Tu 1 . + CDS 2751 - 3425 1040 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 5 3 Op 1 . - CDS 3520 - 3654 171 ## gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein 6 3 Op 2 . - CDS 3713 - 4066 478 ## COG0221 Inorganic pyrophosphatase 7 3 Op 3 . - CDS 4082 - 4285 441 ## - Prom 4310 - 4369 3.8 - TRNA 4156 - 4231 84.2 # Asn GTT 0 0 - 5S_RRNA 4240 - 4355 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Predicted protein(s) >gi|292606595|gb|ADGG01000015.1| GENE 1 233 - 376 119 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 1 47 43 89 89 78 85.0 2e-13 MRHVLVGYELHEDFSKHIGKLVCRRRVKLCNKETELLGTLKASITTT >gi|292606595|gb|ADGG01000015.1| GENE 2 423 - 2258 2150 611 aa, chain - ## HITS:1 COG:FN0102 KEGG:ns NR:ns ## COG: FN0102 COG0209 # Protein_GI_number: 19703450 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Fusobacterium nucleatum # 1 611 1 611 755 1134 93.0 0 MTNERRKVINRDNIVEDLNIEKIREKLLRACDGLEVNMVELESNIDSIYEENITTQKIQA SLINTAVTMTSFEESDWAYVAGRLLMMEAEREVYHSRKFSYGDFAKTIKHMVELGLYDER LLAYTEEELNQISQLIDLSRDMVYDYAGANMLVNRYLIKHDGKTYELPQETFMTISMMLA LNEKEGETRVNIVKEFYNALSLRKLSLATPILANLRIPNGNLSSCFITAIDDNIESIFYN IDSIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPWIRIINDTAVAVNQQGRRAG AVTVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSNLFMKRVKNNESWTLFDPYE IRKKYGVELCELYGYEFENLYEKLEKDNDIKLKRVLSAKELFKSIMKTQLETGMPYIFFK DRANEVNHNSHMGMIGNGNLCMESFSNFKPTINFVEEEDGNTSIRRSEMGEIHTCNLISL NLAELTSDELEKYVALAVRALDNTIDLTVTPLKESNKHNLMYRTIGVGAMGLADYLAREY MIYEESINEINELFERIALYSIKASALLAKDRGAYKAFKGSKWDQAIFFGKKREWYEANS KFKDEWNEAFY >gi|292606595|gb|ADGG01000015.1| GENE 3 2258 - 2494 286 78 aa, chain - ## HITS:1 COG:no KEGG:FN0101 NR:ns ## KEGG: FN0101 # Name: not_defined # Def: glutaredoxin # Organism: F.nucleatum # Pathway: not_defined # 12 78 1 67 67 108 92.0 4e-23 MENNEFKECLEMIKVYGKENCSKCTSLKGILTDRNIEFEYIEDVKTLMIVASKARIMSAP VIEYNDTVYSMEAFLKVI >gi|292606595|gb|ADGG01000015.1| GENE 4 2751 - 3425 1040 224 aa, chain + ## HITS:1 COG:FN0100 KEGG:ns NR:ns ## COG: FN0100 COG1018 # Protein_GI_number: 19703448 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Fusobacterium nucleatum # 9 224 1 215 215 343 82.0 2e-94 MKKIYDLNLVERNDVAENTIELIFTKPSDYEFKIGQYTFLNVGEDPQDKNFARALSIASH PDEDLLRFVMRTSDSEFKQRCLAMKKGDSATVTKAIGSFGFKFSDKEIVFLISGIGIAPI IPMLIELEKINYQGKVSLFYSNRTLAKTTYHERLGSYNIKNYNYNPVFTGIQPRINIDLL KEKLDDIYDAHYYIIGTGEFIKTMKTLLEENNISKDHYLVDNFG >gi|292606595|gb|ADGG01000015.1| GENE 5 3520 - 3654 171 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291460857|ref|ZP_06600222.1| ## NR: gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 44 1 44 44 64 93.0 2e-09 MEILDKKSNRMSRANAGVSERSEFPDFLEALSNLLLRASYDADS >gi|292606595|gb|ADGG01000015.1| GENE 6 3713 - 4066 478 117 aa, chain - ## HITS:1 COG:FN0099 KEGG:ns NR:ns ## COG: FN0099 COG0221 # Protein_GI_number: 19703447 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 1 117 1 117 117 194 83.0 4e-50 MLKDIEKYKFYLNKEVLVKVDRKLGEKHPNFDYIYPVNYGYIPNTLSEDGEEIDVYILGI FYPVDEFKGICKAVICRYDDNENKLIVVPRDKSYSVEQVEALIEFQEKFFKHKIIIE >gi|292606595|gb|ADGG01000015.1| GENE 7 4082 - 4285 441 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLGWKRPGRVWICQATVASLAQSVEHAAVNRSVNGSSPLGSAILEIQHTIQCVFLFYMI KFKKDLL Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:34 2011 Seq name: gi|292606594|gb|ADGG01000016.1| Fusobacterium sp. 1_1_41FAA cont1.16, whole genome shotgun sequence Length of sequence - 1030 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 508 - 552 5.0 1 1 Tu 1 . - CDS 583 - 1029 744 ## gi|294782028|ref|ZP_06747359.1| myosin IH heavy chain Predicted protein(s) >gi|292606594|gb|ADGG01000016.1| GENE 1 583 - 1029 744 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782028|ref|ZP_06747359.1| ## NR: gi|294782028|ref|ZP_06747359.1| myosin IH heavy chain [Fusobacterium sp. 1_1_41FAA] # 4 148 1 145 145 94 100.0 2e-18 KKDMKEVKDKVETKADAAKADVKKDMKEVKDKVETKADAAKADVKKDVKEVKDKVETKAD AAKADAKKEVEKAKDKVESKAEAVKEDAKKDLVKDKAEETSKMEELKEDVKEKATAVKKA TKKVVKKAKNKTKAVVKKVAEKVEEAAK Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:42 2011 Seq name: gi|292606593|gb|ADGG01000017.1| Fusobacterium sp. 1_1_41FAA cont1.17, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 508 541 ## Lebu_0003 protein of unknown function DUF1703 Predicted protein(s) >gi|292606593|gb|ADGG01000017.1| GENE 1 1 - 508 541 169 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 1 169 219 390 545 190 56.0 2e-47 IIRVIKAGIFSDLNNLRTYTILSDVYTDSYGLTEEEVEKSLKDYGIEQEISNVKDWYDGY RFGDSEVYNPWSILNFLDFKELRAYWVDTSGNDLIKDVLKNITKNTIEALERLFNGEGLK QNISGTSDLSKLLSEDELWELMLFSGYLTVEEKIDQKNYVLRLPNKEIK Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:46 2011 Seq name: gi|292606592|gb|ADGG01000018.1| Fusobacterium sp. 1_1_41FAA cont1.18, whole genome shotgun sequence Length of sequence - 606 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 124 - 183 5.3 1 1 Tu 1 . + CDS 263 - 454 140 ## gi|294782032|ref|ZP_06747361.1| hypothetical protein HMPREF0400_02375 Predicted protein(s) >gi|292606592|gb|ADGG01000018.1| GENE 1 263 - 454 140 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782032|ref|ZP_06747361.1| ## NR: gi|294782032|ref|ZP_06747361.1| hypothetical protein HMPREF0400_02375 [Fusobacterium sp. 1_1_41FAA] # 1 63 1 63 63 77 100.0 2e-13 MNNTTIENVALKFAILLVLVYNIFRTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIK VEV Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:50 2011 Seq name: gi|292606591|gb|ADGG01000019.1| Fusobacterium sp. 1_1_41FAA cont1.19, whole genome shotgun sequence Length of sequence - 1323 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 29 - 991 801 ## GWCH70_0818 putative IS transposase Predicted protein(s) >gi|292606591|gb|ADGG01000019.1| GENE 1 29 - 991 801 320 aa, chain + ## HITS:1 COG:no KEGG:GWCH70_0818 NR:ns ## KEGG: GWCH70_0818 # Name: not_defined # Def: putative IS transposase # Organism: Geobacillus_WCH70 # Pathway: not_defined # 2 294 183 483 487 294 55.0 3e-78 MYCRLLKRVVNGKNKYYVQITFEGTPPKKHKVGGENEIGIDIGTSTIAIVSDNKVELKIL AENIEINEKEKTRLQRKLDRQRRANNPNKYNKDGTINIENKEKWKKSKSYVKTKLKLSNL QRKIAEKRKQSHNILANSILEIGTIVKVENMNFKALQRRSKKTEISEKTGKFKKKKRFGK SLSNRAPALLIEIINRKLEYIGKNIIKIDTFKVKASQLNHSTNEYEKKSLSKRWVEILGN KIQRDLYSAFLIKNVKENLEEVNIEKAQKEFKNFVKLHNEEIERIKKGNVKTLNVWDFKI KTGFEPSQQDVNVLNGELVH Prediction of potential genes in microbial genomes Time: Thu May 19 21:23:55 2011 Seq name: gi|292606590|gb|ADGG01000020.1| Fusobacterium sp. 1_1_41FAA cont1.20, whole genome shotgun sequence Length of sequence - 589 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 589 775 ## FN0033 hypothetical protein Predicted protein(s) >gi|292606590|gb|ADGG01000020.1| GENE 1 1 - 589 775 196 aa, chain - ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 196 1413 1607 1607 379 95.0 1e-104 ARRWIIDGQEGLEKVYYKKNIIAKIFALADWFSPADIEAPTLEEVQFFDRKTFKPILIDN VPDLVFTEVMRDIDLVVSVAHIGDVDPEASHSTIEMRKAIIEFNCKLFKLKNVKFTENHV LIKGERAEYSIHLGSGLIHQKAGSAINVLPVHSQHRGRVFLPFIDDDPKTAEIMAKVILF AQDEKIKDVFILEQIK Prediction of potential genes in microbial genomes Time: Thu May 19 21:25:43 2011 Seq name: gi|292606589|gb|ADGG01000021.1| Fusobacterium sp. 1_1_41FAA cont1.21, whole genome shotgun sequence Length of sequence - 338886 bp Number of predicted genes - 361, with homology - 354 Number of transcription units - 131, operones - 79 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 177 91 ## gi|254303988|ref|ZP_04971346.1| hypothetical protein FNP_1655 + Term 191 - 259 30.4 + 5S_RRNA 49 - 164 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + TRNA 173 - 248 84.2 # Asn GTT 0 0 - Term 156 - 226 22.7 2 2 Op 1 . - CDS 284 - 778 724 ## gi|294782038|ref|ZP_06747364.1| conserved hypothetical protein - Term 816 - 852 4.2 3 2 Op 2 . - CDS 858 - 1088 397 ## gi|294782039|ref|ZP_06747365.1| hypothetical protein HMPREF0400_00002 4 2 Op 3 . - CDS 1136 - 2071 1167 ## FN0493 hypothetical protein - Prom 2179 - 2238 7.2 + Prom 2174 - 2233 9.6 5 3 Op 1 10/0.000 + CDS 2335 - 3054 266 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 6 3 Op 2 . + CDS 3113 - 4321 1973 ## COG0183 Acetyl-CoA acetyltransferase + Term 4345 - 4378 3.1 - Term 4365 - 4420 13.2 7 4 Tu 1 . - CDS 4444 - 4989 844 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 5024 - 5083 10.7 - Term 5006 - 5051 -0.4 8 5 Op 1 7/0.000 - CDS 5178 - 6227 684 ## PROTEIN SUPPORTED gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 9 5 Op 2 1/0.360 - CDS 6220 - 7602 1717 ## COG1066 Predicted ATP-dependent serine protease 10 5 Op 3 . - CDS 7605 - 7790 89 ## COG0669 Phosphopantetheine adenylyltransferase 11 5 Op 4 . - CDS 7762 - 8097 229 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 12 5 Op 5 . - CDS 8118 - 9359 1490 ## FN0155 hypothetical protein 13 5 Op 6 . - CDS 9385 - 9873 338 ## COG1530 Ribonucleases G and E - Prom 9913 - 9972 2.1 14 6 Op 1 1/0.360 - CDS 10056 - 10760 799 ## COG1530 Ribonucleases G and E 15 6 Op 2 3/0.000 - CDS 10753 - 11781 942 ## COG1243 Histone acetyltransferase 16 6 Op 3 1/0.360 - CDS 11768 - 12472 849 ## COG0571 dsRNA-specific ribonuclease 17 6 Op 4 27/0.000 - CDS 12487 - 13728 1870 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 13754 - 13813 8.1 - Term 13759 - 13796 3.1 18 7 Op 1 6/0.000 - CDS 13823 - 14050 490 ## COG0236 Acyl carrier protein 19 7 Op 2 14/0.000 - CDS 14130 - 15023 1374 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 20 7 Op 3 16/0.000 - CDS 15053 - 16039 1480 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 21 7 Op 4 . - CDS 16039 - 17037 1196 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme - Prom 17063 - 17122 18.0 + Prom 17123 - 17182 14.6 22 8 Tu 1 . + CDS 17260 - 18003 840 ## FN0721 hypothetical protein + Term 18010 - 18053 3.9 - Term 18000 - 18039 6.0 23 9 Op 1 4/0.000 - CDS 18048 - 18611 898 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 24 9 Op 2 . - CDS 18623 - 19663 1011 ## COG4394 Uncharacterized protein conserved in bacteria 25 9 Op 3 . - CDS 19663 - 20076 549 ## gi|294782057|ref|ZP_06747383.1| glycosidase CRH1 26 9 Op 4 . - CDS 20089 - 20769 873 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 27 9 Op 5 . - CDS 20769 - 21656 957 ## FN0716 phophatidylinositol-4-phosphate 5-kinase (EC:2.7.1.68) 28 9 Op 6 . - CDS 21640 - 22506 1094 ## FN0715 hypothetical protein 29 9 Op 7 . - CDS 22543 - 23292 840 ## FN0715 hypothetical protein 30 9 Op 8 1/0.360 - CDS 23371 - 24318 1257 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 31 9 Op 9 7/0.000 - CDS 24329 - 24859 485 ## COG2059 Chromate transport protein ChrA 32 9 Op 10 1/0.360 - CDS 24856 - 25428 495 ## COG2059 Chromate transport protein ChrA 33 9 Op 11 . - CDS 25415 - 26635 1612 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 34 9 Op 12 . - CDS 26632 - 27309 801 ## FN0710 hypothetical protein 35 9 Op 13 1/0.360 - CDS 27376 - 28851 578 ## PROTEIN SUPPORTED gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 36 9 Op 14 1/0.360 - CDS 28839 - 29516 697 ## COG1354 Uncharacterized conserved protein 37 9 Op 15 1/0.360 - CDS 29491 - 30447 398 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 38 9 Op 16 1/0.360 - CDS 30460 - 31356 749 ## COG1481 Uncharacterized protein conserved in bacteria 39 9 Op 17 . - CDS 31369 - 34119 3503 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 34156 - 34215 19.4 + Prom 34137 - 34196 12.6 40 10 Tu 1 . + CDS 34422 - 34679 303 ## gi|294782072|ref|ZP_06747398.1| hypothetical protein HMPREF0400_00037 + Term 34706 - 34753 1.6 + Prom 34756 - 34815 10.4 41 11 Op 1 15/0.000 + CDS 34855 - 35049 485 ## COG2608 Copper chaperone 42 11 Op 2 2/0.080 + CDS 35084 - 36709 2269 ## COG2217 Cation transport ATPase + Prom 36712 - 36771 3.0 43 11 Op 3 . + CDS 36801 - 37394 674 ## COG2217 Cation transport ATPase + Term 37399 - 37440 6.7 + Prom 37558 - 37617 8.8 44 12 Op 1 . + CDS 37675 - 37944 378 ## gi|294782073|ref|ZP_06747399.1| conserved hypothetical protein 45 12 Op 2 . + CDS 37959 - 38306 506 ## gi|294782074|ref|ZP_06747400.1| conserved hypothetical protein 46 12 Op 3 . + CDS 38321 - 39715 1319 ## jhp0940 hypothetical protein + Term 39731 - 39783 1.3 + Prom 39810 - 39869 13.0 47 13 Tu 1 . + CDS 39896 - 40726 1057 ## COG2849 Uncharacterized protein conserved in bacteria + Term 40734 - 40772 7.3 - Term 40722 - 40759 3.3 48 14 Op 1 12/0.000 - CDS 40767 - 41531 1322 ## COG0024 Methionine aminopeptidase 49 14 Op 2 1/0.360 - CDS 41567 - 42202 966 ## COG0563 Adenylate kinase and related kinases 50 14 Op 3 . - CDS 42261 - 43193 1087 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 43213 - 43272 5.3 51 14 Op 4 . - CDS 43281 - 43433 86 ## - Prom 43616 - 43675 7.6 + Prom 43553 - 43612 9.1 52 15 Tu 1 . + CDS 43640 - 45262 2455 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 45289 - 45327 -0.9 - Term 45316 - 45346 1.0 53 16 Op 1 1/0.360 - CDS 45353 - 45778 601 ## COG1959 Predicted transcriptional regulator 54 16 Op 2 1/0.360 - CDS 45802 - 46713 970 ## COG3872 Predicted metal-dependent enzyme 55 16 Op 3 1/0.360 - CDS 46728 - 48284 1352 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit 56 16 Op 4 5/0.000 - CDS 48320 - 50041 1812 ## COG0322 Nuclease subunit of the excinuclease complex 57 16 Op 5 . - CDS 50076 - 50948 906 ## COG1660 Predicted P-loop-containing kinase 58 16 Op 6 . - CDS 50963 - 52312 199 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 52342 - 52401 8.5 + Prom 52397 - 52456 13.6 59 17 Op 1 2/0.080 + CDS 52489 - 53145 704 ## COG0491 Zn-dependent hydrolases, including glyoxylases 60 17 Op 2 . + CDS 53146 - 54069 385 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 54072 - 54125 -0.1 + Prom 54071 - 54130 4.8 61 18 Op 1 . + CDS 54158 - 54718 711 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 62 18 Op 2 . + CDS 54693 - 55223 436 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 63 18 Op 3 . + CDS 55240 - 56187 464 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 64 19 Tu 1 . - CDS 56180 - 56368 66 ## - Prom 56404 - 56463 7.1 + Prom 56312 - 56371 10.2 65 20 Op 1 16/0.000 + CDS 56393 - 57421 1609 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 57446 - 57478 2.5 + Prom 57427 - 57486 7.8 66 20 Op 2 10/0.000 + CDS 57509 - 59011 192 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 67 20 Op 3 . + CDS 59029 - 60048 1498 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 60061 - 60098 5.1 + Prom 60062 - 60121 7.0 68 21 Tu 1 . + CDS 60241 - 60561 292 ## FN0337 hypothetical protein + Prom 60586 - 60645 12.3 69 22 Op 1 . + CDS 60723 - 61922 1603 ## FN0336 hypothetical protein 70 22 Op 2 1/0.360 + CDS 61954 - 62505 688 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 62530 - 62585 12.1 + Prom 62521 - 62580 5.0 71 23 Op 1 1/0.360 + CDS 62600 - 63847 1514 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase 72 23 Op 2 1/0.360 + CDS 63859 - 64419 774 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 73 23 Op 3 . + CDS 64466 - 65491 1098 ## COG0598 Mg2+ and Co2+ transporters + Term 65517 - 65571 3.3 + Prom 65542 - 65601 9.1 74 24 Op 1 . + CDS 65631 - 67127 2103 ## COG2268 Uncharacterized protein conserved in bacteria 75 24 Op 2 . + CDS 67187 - 67909 960 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 67936 - 67985 9.1 + Prom 67979 - 68038 12.7 76 25 Op 1 . + CDS 68063 - 69244 616 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 77 25 Op 2 . + CDS 69260 - 69799 519 ## FN1032 hypothetical protein 78 25 Op 3 22/0.000 + CDS 69808 - 70887 886 ## COG0795 Predicted permeases 79 25 Op 4 1/0.360 + CDS 70887 - 71978 1148 ## COG0795 Predicted permeases 80 25 Op 5 1/0.360 + CDS 71997 - 73223 1501 ## COG0612 Predicted Zn-dependent peptidases 81 25 Op 6 1/0.360 + CDS 73224 - 73664 838 ## COG0756 dUTPase 82 25 Op 7 1/0.360 + CDS 73684 - 74784 1035 ## COG0772 Bacterial cell division membrane protein 83 25 Op 8 1/0.360 + CDS 74784 - 75674 192 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Term 75679 - 75726 7.9 + Prom 75677 - 75736 3.5 84 26 Tu 1 1/0.360 + CDS 75756 - 77048 1586 ## COG2252 Permeases + Prom 77065 - 77124 7.3 85 27 Tu 1 . + CDS 77194 - 77502 670 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 77513 - 77557 7.4 + Prom 77594 - 77653 12.4 86 28 Op 1 4/0.000 + CDS 77697 - 78779 1380 ## COG0502 Biotin synthase and related enzymes 87 28 Op 2 12/0.000 + CDS 78769 - 79428 694 ## COG0132 Dethiobiotin synthetase 88 28 Op 3 . + CDS 79441 - 80778 1774 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase + Term 80810 - 80842 4.2 + Prom 80808 - 80867 7.9 89 29 Tu 1 . + CDS 80894 - 82549 1933 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 82603 - 82648 -0.6 + Prom 82563 - 82622 10.0 90 30 Op 1 . + CDS 82671 - 84806 2274 ## Hsero_0501 membrane protein 91 30 Op 2 . + CDS 84806 - 85504 508 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 92 30 Op 3 . + CDS 85497 - 86075 633 ## gi|294782118|ref|ZP_06747444.1| conserved hypothetical protein 93 30 Op 4 . + CDS 86084 - 86905 1063 ## FN0872 hypothetical protein 94 30 Op 5 . + CDS 86918 - 87274 310 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 95 30 Op 6 1/0.360 + CDS 87338 - 89350 2434 ## COG0337 3-dehydroquinate synthetase 96 30 Op 7 1/0.360 + CDS 89331 - 90194 1237 ## COG0607 Rhodanese-related sulfurtransferase 97 30 Op 8 1/0.360 + CDS 90204 - 90998 1112 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 91162 - 91221 12.8 98 31 Op 1 . + CDS 91242 - 92075 1004 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 99 31 Op 2 . + CDS 92084 - 92233 170 ## 100 31 Op 3 1/0.360 + CDS 92245 - 94755 3000 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 101 31 Op 4 . + CDS 94780 - 95466 805 ## COG0670 Integral membrane protein, interacts with FtsH 102 31 Op 5 . + CDS 95485 - 96261 1086 ## FN0865 hypothetical protein + Prom 96267 - 96326 4.2 103 32 Tu 1 . + CDS 96464 - 97036 792 ## PFLU4248 hypothetical protein + Term 97050 - 97103 5.9 + Prom 97069 - 97128 10.8 104 33 Op 1 7/0.000 + CDS 97223 - 98719 1458 ## COG1640 4-alpha-glucanotransferase 105 33 Op 2 4/0.000 + CDS 98733 - 101099 3316 ## COG0058 Glucan phosphorylase 106 33 Op 3 6/0.000 + CDS 101127 - 102965 2145 ## COG0296 1,4-alpha-glucan branching enzyme 107 33 Op 4 7/0.000 + CDS 102968 - 104101 1508 ## COG0448 ADP-glucose pyrophosphorylase 108 33 Op 5 17/0.000 + CDS 104119 - 105282 1326 ## COG0448 ADP-glucose pyrophosphorylase 109 33 Op 6 . + CDS 105298 - 106683 1797 ## COG0297 Glycogen synthase 110 33 Op 7 . + CDS 106750 - 106962 171 ## gi|294782136|ref|ZP_06747462.1| riboflavin synthase alpha chain 111 33 Op 8 1/0.360 + CDS 106992 - 107483 557 ## COG4807 Uncharacterized protein conserved in bacteria 112 33 Op 9 . + CDS 107499 - 109967 2152 ## COG1199 Rad3-related DNA helicases 113 33 Op 10 7/0.000 + CDS 109984 - 112056 2249 ## COG1480 Predicted membrane-associated HD superfamily hydrolase 114 33 Op 11 . + CDS 112071 - 112559 788 ## COG0319 Predicted metal-dependent hydrolase + Term 112583 - 112620 3.2 - Term 112569 - 112608 6.1 115 34 Op 1 16/0.000 - CDS 112632 - 113513 1579 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 116 34 Op 2 34/0.000 - CDS 113531 - 114298 258 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 117 34 Op 3 17/0.000 - CDS 114295 - 114975 680 ## COG0765 ABC-type amino acid transport system, permease component 118 34 Op 4 . - CDS 114956 - 115615 644 ## COG0765 ABC-type amino acid transport system, permease component - Prom 115840 - 115899 10.1 + Prom 115730 - 115789 10.1 119 35 Tu 1 . + CDS 115869 - 117851 2499 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases + Prom 117984 - 118043 8.0 120 36 Op 1 2/0.080 + CDS 118063 - 119868 1991 ## COG4907 Predicted membrane protein 121 36 Op 2 2/0.080 + CDS 119911 - 120462 863 ## COG1704 Uncharacterized conserved protein 122 36 Op 3 . + CDS 120471 - 121661 181 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 121665 - 121720 11.3 - Term 121656 - 121704 11.5 123 37 Op 1 . - CDS 121708 - 122250 750 ## FN0212 hypothetical protein 124 37 Op 2 1/0.360 - CDS 122280 - 122786 648 ## COG1778 Low specificity phosphatase (HAD superfamily) 125 37 Op 3 1/0.360 - CDS 122783 - 123367 822 ## COG0817 Holliday junction resolvasome, endonuclease subunit 126 37 Op 4 1/0.360 - CDS 123367 - 124119 279 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 127 37 Op 5 . - CDS 124144 - 124908 1009 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 124973 - 125032 15.6 + Prom 124925 - 124984 12.1 128 38 Op 1 1/0.360 + CDS 125085 - 125738 656 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 129 38 Op 2 . + CDS 125735 - 126604 1283 ## COG2071 Predicted glutamine amidotransferases + Term 126671 - 126708 1.0 - Term 126560 - 126617 -0.5 130 39 Op 1 9/0.000 - CDS 126630 - 127355 790 ## COG3279 Response regulator of the LytR/AlgR family 131 39 Op 2 . - CDS 127348 - 129024 1782 ## COG3275 Putative regulator of cell autolysis - Prom 129126 - 129185 14.3 + Prom 129060 - 129119 13.1 132 40 Tu 1 . + CDS 129281 - 130705 2147 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 130727 - 130771 7.5 + Prom 130744 - 130803 16.0 133 41 Tu 1 . + CDS 130902 - 131540 997 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 131668 - 131706 4.4 - Term 131656 - 131694 6.0 134 42 Tu 1 . - CDS 131702 - 133006 1751 ## COG0427 Acetyl-CoA hydrolase - Prom 133213 - 133272 18.4 + Prom 132987 - 133046 10.1 135 43 Op 1 . + CDS 133204 - 133857 787 ## COG1059 Thermostable 8-oxoguanine DNA glycosylase 136 43 Op 2 . + CDS 133854 - 134297 514 ## SEN0273 rhs-associated protein + Prom 134300 - 134359 5.2 137 44 Op 1 . + CDS 134403 - 135266 924 ## COG0679 Predicted permeases 138 44 Op 2 . + CDS 135331 - 135960 621 ## COG1309 Transcriptional regulator 139 44 Op 3 . + CDS 135948 - 136448 521 ## gi|294782165|ref|ZP_06747491.1| conserved hypothetical protein 140 44 Op 4 . + CDS 136525 - 137121 426 ## gi|294782166|ref|ZP_06747492.1| conserved hypothetical protein - Term 137062 - 137088 -0.7 141 45 Op 1 . - CDS 137089 - 137604 739 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 142 45 Op 2 . - CDS 137601 - 138947 1571 ## FN0748 hypothetical protein - Prom 139077 - 139136 13.0 - Term 139069 - 139116 7.9 143 46 Op 1 . - CDS 139144 - 139770 987 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase 144 46 Op 2 . - CDS 139793 - 140338 720 ## COG3236 Uncharacterized protein conserved in bacteria 145 46 Op 3 1/0.360 - CDS 140354 - 141595 1822 ## COG1228 Imidazolonepropionase and related amidohydrolases - Prom 141615 - 141674 2.7 - Term 141614 - 141655 3.0 146 46 Op 4 . - CDS 141677 - 142642 1534 ## COG3643 Glutamate formiminotransferase - Prom 142765 - 142824 11.4 147 47 Op 1 44/0.000 - CDS 142830 - 143591 565 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 148 47 Op 2 5/0.000 - CDS 143609 - 144388 252 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 149 47 Op 3 5/0.000 - CDS 144401 - 145963 2189 ## COG0747 ABC-type dipeptide transport system, periplasmic component 150 47 Op 4 49/0.000 - CDS 145999 - 146811 1088 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 151 47 Op 5 . - CDS 146808 - 147749 758 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 147878 - 147937 15.5 + Prom 147750 - 147809 11.5 152 48 Op 1 9/0.000 + CDS 147943 - 148497 309 ## COG3683 ABC-type uncharacterized transport system, periplasmic component + Prom 148626 - 148685 9.9 153 48 Op 2 . + CDS 148741 - 149532 782 ## COG2215 ABC-type uncharacterized transport system, permease component 154 48 Op 3 . + CDS 149534 - 149905 388 ## gi|294782180|ref|ZP_06747506.1| conserved hypothetical protein 155 48 Op 4 . + CDS 149918 - 150529 850 ## COG3340 Peptidase E + Prom 150559 - 150618 7.5 156 49 Tu 1 . + CDS 150649 - 151863 617 ## COG0477 Permeases of the major facilitator superfamily 157 50 Tu 1 . - CDS 152241 - 153323 1245 ## COG0582 Integrase - Prom 153381 - 153440 2.0 158 51 Tu 1 . - CDS 153456 - 154490 867 ## Smon_1019 Abi family protein - Prom 154589 - 154648 8.1 - Term 154499 - 154542 6.1 159 52 Op 1 . - CDS 154695 - 155486 987 ## gi|294782185|ref|ZP_06747511.1| hypothetical protein HMPREF0400_00152 160 52 Op 2 . - CDS 155473 - 155976 561 ## gi|294782186|ref|ZP_06747512.1| DNA-binding protein - Prom 156010 - 156069 12.0 161 53 Op 1 . - CDS 156082 - 156615 561 ## gi|294782187|ref|ZP_06747513.1| conserved hypothetical protein - Prom 156636 - 156695 2.9 162 53 Op 2 . - CDS 156698 - 157096 253 ## gi|294782188|ref|ZP_06747514.1| toxin-antitoxin system toxin component 163 53 Op 3 . - CDS 157103 - 157498 629 ## Sterm_3926 transcriptional regulator, XRE family - Prom 157519 - 157578 13.3 + Prom 157556 - 157615 12.2 164 54 Tu 1 . + CDS 157663 - 157881 197 ## gi|294782190|ref|ZP_06747516.1| conserved hypothetical protein + Term 157924 - 157962 -0.8 165 55 Tu 1 . + CDS 158322 - 158507 196 ## gi|294782191|ref|ZP_06747517.1| hypothetical protein HMPREF0400_00158 - Term 158437 - 158485 8.1 166 56 Tu 1 . - CDS 158497 - 159078 677 ## Sterm_0826 hypothetical protein - Prom 159104 - 159163 8.7 + Prom 158853 - 158912 7.4 167 57 Op 1 . + CDS 159132 - 159365 385 ## gi|294782193|ref|ZP_06747519.1| hypothetical protein HMPREF0400_00160 168 57 Op 2 . + CDS 159378 - 159506 99 ## + Prom 159538 - 159597 2.4 169 58 Op 1 . + CDS 159625 - 159948 500 ## gi|294782194|ref|ZP_06747520.1| conserved hypothetical protein 170 58 Op 2 . + CDS 159961 - 160209 401 ## gi|294782195|ref|ZP_06747521.1| hypothetical protein HMPREF0400_00162 + Term 160217 - 160256 0.4 171 59 Op 1 . + CDS 160284 - 160469 388 ## gi|294782196|ref|ZP_06747522.1| hypothetical protein HMPREF0400_00163 172 59 Op 2 . + CDS 160469 - 160717 403 ## gi|294782197|ref|ZP_06747523.1| conserved hypothetical protein 173 59 Op 3 . + CDS 160751 - 160975 322 ## gi|291461175|ref|ZP_06027378.2| hypothetical protein FUSPEROL_02051 174 59 Op 4 . + CDS 160987 - 161640 950 ## BB3533 hypothetical protein 175 59 Op 5 . + CDS 161659 - 162246 820 ## gi|294782200|ref|ZP_06747526.1| conserved hypothetical protein 176 59 Op 6 . + CDS 162259 - 164541 2041 ## Sterm_3911 toprim domain protein + Term 164551 - 164601 -0.8 + Prom 164818 - 164877 8.2 177 60 Op 1 . + CDS 164943 - 165116 127 ## gi|294782202|ref|ZP_06747528.1| hypothetical protein HMPREF0400_00169 178 60 Op 2 . + CDS 165130 - 165828 911 ## gi|294782203|ref|ZP_06747529.1| conserved hypothetical protein 179 60 Op 3 . + CDS 165833 - 166627 833 ## gi|294782204|ref|ZP_06747530.1| conserved hypothetical protein 180 60 Op 4 . + CDS 166608 - 166790 254 ## gi|294782205|ref|ZP_06747531.1| hypothetical protein HMPREF0400_00172 181 60 Op 5 . + CDS 166861 - 167334 600 ## gi|294782206|ref|ZP_06747532.1| dynein heavy chain 2 182 60 Op 6 . + CDS 167324 - 167605 252 ## gi|294782207|ref|ZP_06747533.1| hypothetical protein HMPREF0400_00174 183 60 Op 7 . + CDS 167592 - 167804 377 ## gi|294782208|ref|ZP_06747534.1| conserved hypothetical protein 184 60 Op 8 . + CDS 167791 - 167991 237 ## gi|294782209|ref|ZP_06747535.1| hypothetical protein HMPREF0400_00176 + Prom 168054 - 168113 3.0 185 61 Op 1 . + CDS 168135 - 168365 240 ## gi|294782210|ref|ZP_06747536.1| phage protein 186 61 Op 2 . + CDS 168365 - 168805 521 ## DSY2187 hypothetical protein + Prom 168831 - 168890 6.0 187 62 Op 1 . + CDS 168982 - 169530 404 ## gi|294782212|ref|ZP_06747538.1| conserved hypothetical protein + Term 169531 - 169565 2.4 188 62 Op 2 3/0.000 + CDS 169587 - 170027 567 ## COG3728 Phage terminase, small subunit 189 62 Op 3 . + CDS 170020 - 170478 140 ## COG1783 Phage terminase large subunit + Prom 170487 - 170546 7.0 190 62 Op 4 . + CDS 170569 - 171105 636 ## GFO_2427 HNH endonuclease family protein + Term 171131 - 171171 5.2 + Prom 171229 - 171288 3.6 191 63 Op 1 . + CDS 171323 - 172159 1034 ## COG1783 Phage terminase large subunit 192 63 Op 2 . + CDS 172173 - 173486 1640 ## Bcer98_2946 SPP1 family phage portal protein 193 63 Op 3 . + CDS 173473 - 174999 1641 ## COG5585 NAD+--asparagine ADP-ribosyltransferase 194 63 Op 4 . + CDS 174996 - 175247 312 ## gi|294782218|ref|ZP_06747544.1| conserved hypothetical protein + Term 175288 - 175328 4.2 + Prom 175339 - 175398 7.7 195 64 Op 1 . + CDS 175627 - 176202 969 ## gi|256027861|ref|ZP_05441695.1| hypothetical protein PrD11_07666 196 64 Op 2 . + CDS 176206 - 177054 1310 ## spyM18_1772 putative major head protein + Term 177063 - 177100 4.0 197 65 Op 1 . + CDS 177114 - 177443 402 ## gi|294782222|ref|ZP_06747548.1| conserved hypothetical protein 198 65 Op 2 . + CDS 177440 - 177805 430 ## gi|294782223|ref|ZP_06747549.1| conserved hypothetical protein 199 65 Op 3 . + CDS 177795 - 178175 595 ## gi|294782224|ref|ZP_06747550.1| phage protein, HK97 gp10 family 200 65 Op 4 . + CDS 178172 - 178621 535 ## gi|294782225|ref|ZP_06747551.1| conserved hypothetical protein 201 65 Op 5 . + CDS 178621 - 179700 1449 ## Amet_2420 phage-like element pbsx protein XkdK 202 65 Op 6 . + CDS 179713 - 180153 732 ## Amet_2421 phage-like element pbsx protein XkdM 203 65 Op 7 . + CDS 180163 - 180540 536 ## gi|294782228|ref|ZP_06747554.1| conserved hypothetical protein + Prom 180584 - 180643 10.8 204 66 Tu 1 . + CDS 180727 - 180882 179 ## + Term 180897 - 180942 3.1 + Prom 181076 - 181135 8.0 205 67 Op 1 . + CDS 181164 - 181883 660 ## gi|294782231|ref|ZP_06747557.1| conserved hypothetical protein + Term 181890 - 181921 3.1 206 67 Op 2 . + CDS 181928 - 182107 203 ## gi|294782232|ref|ZP_06747558.1| hypothetical protein HMPREF0400_00199 207 67 Op 3 . + CDS 182070 - 182213 96 ## + Prom 182220 - 182279 9.6 208 68 Op 1 . + CDS 182303 - 182950 582 ## gi|294782233|ref|ZP_06747559.1| conserved hypothetical protein + Term 182953 - 182992 -0.2 + Prom 182974 - 183033 8.6 209 68 Op 2 . + CDS 183056 - 183229 173 ## gi|294782234|ref|ZP_06747560.1| hypothetical protein HMPREF0400_00201 210 69 Op 1 . + CDS 183356 - 183559 362 ## gi|294782235|ref|ZP_06747561.1| hypothetical protein HMPREF0400_00202 211 69 Op 2 . + CDS 183549 - 184301 970 ## Sterm_0837 hypothetical protein + Term 184312 - 184343 0.1 212 69 Op 3 . + CDS 184353 - 186287 2440 ## COG5283 Phage-related tail protein 213 69 Op 4 . + CDS 186301 - 186747 257 ## gi|294782238|ref|ZP_06747564.1| conserved hypothetical protein 214 69 Op 5 . + CDS 186752 - 187810 1298 ## EUBELI_10013 hypothetical protein 215 69 Op 6 . + CDS 187807 - 188259 706 ## gi|294782240|ref|ZP_06747566.1| conserved hypothetical protein 216 69 Op 7 . + CDS 188261 - 188686 465 ## CDR20291_1214 phage protein 217 69 Op 8 . + CDS 188687 - 189751 1240 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 218 69 Op 9 . + CDS 189744 - 190394 437 ## CTC02112 phage-like element pbsx protein XkdT 219 69 Op 10 . + CDS 190398 - 191087 730 ## gi|294782244|ref|ZP_06747570.1| conserved hypothetical protein 220 70 Tu 1 . - CDS 191134 - 191412 72 ## gi|294782245|ref|ZP_06747571.1| hypothetical protein HMPREF0400_00212 - Prom 191436 - 191495 8.9 + Prom 191268 - 191327 12.4 221 71 Tu 1 . + CDS 191421 - 191717 61 ## gi|294782246|ref|ZP_06747572.1| hypothetical protein HMPREF0400_00213 - Term 191419 - 191478 -0.3 222 72 Tu 1 . - CDS 191723 - 192019 221 ## gi|294782247|ref|ZP_06747573.1| hypothetical protein HMPREF0400_00214 - Prom 192139 - 192198 4.8 + Prom 191756 - 191815 5.8 223 73 Tu 1 . + CDS 192025 - 192339 287 ## gi|294782248|ref|ZP_06747574.1| conserved hypothetical protein - Term 192185 - 192221 -0.2 224 74 Tu 1 . - CDS 192336 - 192641 215 ## gi|262067722|ref|ZP_06027334.1| conserved hypothetical protein - Prom 192772 - 192831 3.4 + Prom 192466 - 192525 7.8 225 75 Tu 1 . + CDS 192647 - 192913 326 ## gi|294782249|ref|ZP_06747575.1| hypothetical protein HMPREF0400_00217 226 76 Tu 1 . - CDS 192910 - 193239 125 ## gi|294782252|ref|ZP_06747578.1| hypothetical protein HMPREF0400_00218 - Prom 193404 - 193463 6.5 + Prom 192991 - 193050 4.6 227 77 Tu 1 . + CDS 193245 - 193571 279 ## gi|294782251|ref|ZP_06747577.1| hypothetical protein HMPREF0400_00219 - Term 193341 - 193384 -1.0 228 78 Tu 1 . - CDS 193563 - 193976 171 ## gi|294782253|ref|ZP_06747579.1| conserved hypothetical protein - Prom 194111 - 194170 9.1 + Prom 193913 - 193972 7.8 229 79 Tu 1 . + CDS 193994 - 194968 720 ## COG0582 Integrase + Term 194979 - 195035 -0.9 + Prom 195010 - 195069 11.1 230 80 Op 1 . + CDS 195158 - 195877 1148 ## gi|294782255|ref|ZP_06747581.1| hypothetical protein HMPREF0400_00222 + Prom 195879 - 195938 10.9 231 80 Op 2 . + CDS 195966 - 196466 641 ## Sterm_2506 hypothetical protein 232 80 Op 3 . + CDS 196479 - 196838 475 ## FN0636 hypothetical protein 233 80 Op 4 . + CDS 196838 - 197137 215 ## gi|294782258|ref|ZP_06747584.1| sensor histidine kinase KinD + Prom 197224 - 197283 13.3 234 81 Op 1 . + CDS 197319 - 197747 606 ## HPB8_12 hypothetical protein 235 81 Op 2 . + CDS 197740 - 198735 834 ## gi|294782260|ref|ZP_06747586.1| conserved hypothetical protein + Prom 198973 - 199032 10.3 236 82 Tu 1 . + CDS 199125 - 199520 407 ## gi|237740662|ref|ZP_04571143.1| conserved hypothetical protein - Term 199630 - 199669 -0.3 237 83 Tu 1 . - CDS 199681 - 199932 283 ## gi|294782261|ref|ZP_06747587.1| hypothetical protein HMPREF0400_00229 - Prom 200112 - 200171 7.5 238 84 Op 1 . - CDS 200192 - 200908 749 ## gi|294782262|ref|ZP_06747588.1| ABC transporter ATP-binding protein - Prom 200935 - 200994 10.8 239 84 Op 2 . - CDS 201015 - 201185 292 ## gi|294782263|ref|ZP_06747589.1| hypothetical protein HMPREF0400_00231 - Prom 201317 - 201376 12.3 + Prom 201289 - 201348 14.5 240 85 Op 1 1/0.360 + CDS 201419 - 202633 1241 ## COG1570 Exonuclease VII, large subunit 241 85 Op 2 5/0.000 + CDS 202614 - 203414 1165 ## COG0457 FOG: TPR repeat 242 85 Op 3 13/0.000 + CDS 203439 - 204293 1015 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 243 85 Op 4 1/0.360 + CDS 204356 - 208156 4051 ## COG0550 Topoisomerase IA 244 85 Op 5 . + CDS 208173 - 209444 1280 ## COG0270 Site-specific DNA methylase + Prom 209494 - 209553 12.4 245 86 Op 1 5/0.000 + CDS 209579 - 210883 1900 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation 246 86 Op 2 1/0.360 + CDS 210889 - 211731 758 ## COG4974 Site-specific recombinase XerD 247 86 Op 3 . + CDS 211744 - 212844 1477 ## COG1161 Predicted GTPases 248 86 Op 4 . + CDS 212846 - 213346 253 ## FN1073 hypothetical protein 249 86 Op 5 . + CDS 213371 - 214480 726 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 214489 - 214554 10.4 250 87 Op 1 . - CDS 216161 - 216823 589 ## TDE0330 CRISPR-associated Csn2 family protein 251 87 Op 2 4/0.000 - CDS 216820 - 217125 270 ## COG3512 Uncharacterized protein conserved in bacteria 252 87 Op 3 5/0.000 - CDS 217130 - 218008 717 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 253 87 Op 4 . - CDS 218032 - 222135 4584 ## COG3513 Uncharacterized protein conserved in bacteria - Prom 222265 - 222324 14.5 - Term 222455 - 222508 7.1 254 88 Op 1 . - CDS 222533 - 223300 976 ## FN1144 hypothetical protein 255 88 Op 2 . - CDS 223324 - 224070 906 ## FN1144 hypothetical protein 256 88 Op 3 . - CDS 224094 - 224837 987 ## FN1144 hypothetical protein - Prom 224974 - 225033 9.4 + Prom 224845 - 224904 12.1 257 89 Op 1 . + CDS 224957 - 226342 1466 ## COG2211 Na+/melibiose symporter and related transporters + Prom 226344 - 226403 6.8 258 89 Op 2 . + CDS 226439 - 226648 373 ## gi|237740642|ref|ZP_04571123.1| conserved hypothetical protein + Term 226660 - 226695 3.1 259 90 Op 1 1/0.360 - CDS 226678 - 228396 2011 ## COG1032 Fe-S oxidoreductase 260 90 Op 2 . - CDS 228403 - 229635 1894 ## COG2195 Di- and tripeptidases - Prom 229667 - 229726 12.0 + Prom 229722 - 229781 12.2 261 91 Tu 1 . + CDS 229846 - 230661 1149 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 262 92 Op 1 . - CDS 230824 - 232017 1280 ## COG1323 Predicted nucleotidyltransferase 263 92 Op 2 . - CDS 232036 - 232569 705 ## FN0731 hypothetical protein 264 92 Op 3 . - CDS 232581 - 233267 980 ## COG0588 Phosphoglycerate mutase 1 - Prom 233340 - 233399 15.5 + Prom 233314 - 233373 10.7 265 93 Op 1 . + CDS 233393 - 234115 649 ## COG3177 Uncharacterized conserved protein 266 93 Op 2 . + CDS 234128 - 234883 1115 ## FN0728 hypothetical protein + Prom 234885 - 234944 6.5 267 93 Op 3 . + CDS 234964 - 235281 393 ## gi|294782292|ref|ZP_06747618.1| surface protein + Prom 235499 - 235558 11.5 268 94 Tu 1 . + CDS 235616 - 236464 1027 ## FN0331 hypothetical protein + Term 236466 - 236515 10.3 - Term 236448 - 236503 13.3 269 95 Tu 1 . - CDS 236518 - 236721 331 ## - Prom 236750 - 236809 10.4 + Prom 236897 - 236956 16.0 270 96 Tu 1 . + CDS 237006 - 237512 699 ## FN0688 hypothetical protein + Term 237525 - 237573 3.1 - Term 237512 - 237559 -0.9 271 97 Op 1 . - CDS 237568 - 239139 2104 ## FN0616 hypothetical protein - Prom 239159 - 239218 7.3 - Term 239170 - 239211 -1.0 272 97 Op 2 1/0.360 - CDS 239225 - 241045 2667 ## COG1217 Predicted membrane GTPase involved in stress response 273 97 Op 3 . - CDS 241068 - 241931 981 ## COG0130 Pseudouridine synthase - Prom 241965 - 242024 7.8 274 97 Op 4 . - CDS 242031 - 242732 714 ## gi|294782299|ref|ZP_06747625.1| chaperone HtpG - Prom 242877 - 242936 7.5 275 98 Op 1 . - CDS 242939 - 243916 953 ## COG2849 Uncharacterized protein conserved in bacteria 276 98 Op 2 . - CDS 243934 - 244179 380 ## COG4443 Uncharacterized protein conserved in bacteria - Prom 244253 - 244312 9.7 + Prom 244209 - 244268 10.9 277 99 Tu 1 . + CDS 244288 - 245004 857 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 245009 - 245051 9.2 - Term 244997 - 245039 9.2 278 100 Op 1 1/0.360 - CDS 245047 - 245469 482 ## COG1959 Predicted transcriptional regulator 279 100 Op 2 . - CDS 245497 - 246228 1062 ## COG0560 Phosphoserine phosphatase - Prom 246277 - 246336 11.0 + Prom 246115 - 246174 10.1 280 101 Op 1 . + CDS 246414 - 247274 1156 ## FN0891 DNAse I homologous protein DHP2 precursor (EC:3.1.21.-) 281 101 Op 2 1/0.360 + CDS 247274 - 247897 728 ## COG1564 Thiamine pyrophosphokinase 282 101 Op 3 1/0.360 + CDS 247962 - 248345 658 ## COG5496 Predicted thioesterase + Term 248357 - 248387 1.3 283 102 Op 1 . + CDS 248402 - 249625 849 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 284 102 Op 2 . + CDS 249638 - 250117 671 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 285 102 Op 3 1/0.360 + CDS 250148 - 251650 2087 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 251659 - 251697 6.6 286 102 Op 4 . + CDS 251715 - 252749 1472 ## COG1363 Cellulase M and related proteins + Term 252773 - 252820 7.5 + Prom 252825 - 252884 12.2 287 103 Op 1 1/0.360 + CDS 252920 - 255394 2947 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Prom 255404 - 255463 10.2 288 103 Op 2 . + CDS 255490 - 257004 1634 ## COG4868 Uncharacterized protein conserved in bacteria + Term 257010 - 257054 9.3 - Term 257049 - 257082 3.1 289 104 Op 1 . - CDS 257126 - 258343 1570 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) 290 104 Op 2 1/0.360 - CDS 258349 - 258708 412 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Prom 258781 - 258840 23.4 - Term 258965 - 259014 3.4 291 105 Op 1 14/0.000 - CDS 259032 - 259316 489 ## PROTEIN SUPPORTED gi|237740609|ref|ZP_04571090.1| LSU ribosomal protein L27P 292 105 Op 2 14/0.000 - CDS 259317 - 259646 484 ## PROTEIN SUPPORTED gi|197736146|ref|YP_002164924.1| possible ribosomal protein 293 105 Op 3 . - CDS 259650 - 259961 501 ## PROTEIN SUPPORTED gi|237740607|ref|ZP_04571088.1| LSU ribosomal protein L21P - Prom 260025 - 260084 10.3 294 106 Tu 1 . + CDS 260195 - 261016 1256 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase + Term 261051 - 261092 6.1 - Term 261039 - 261078 1.5 295 107 Op 1 . - CDS 261086 - 262711 1349 ## FN0289 hypothetical protein 296 107 Op 2 . - CDS 262735 - 263538 995 ## COG1262 Uncharacterized conserved protein 297 107 Op 3 . - CDS 263550 - 264074 392 ## FN0167 hypothetical protein 298 107 Op 4 . - CDS 264089 - 264454 279 ## FN0166 hypothetical protein 299 107 Op 5 . - CDS 264468 - 264752 451 ## FN0165 hypothetical protein 300 107 Op 6 . - CDS 264780 - 265556 918 ## COG1262 Uncharacterized conserved protein - Prom 265576 - 265635 10.0 - Term 265583 - 265619 5.0 301 108 Tu 1 1/0.360 - CDS 265637 - 268882 4137 ## COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain - Prom 268908 - 268967 6.7 302 109 Tu 1 . - CDS 269059 - 269925 1063 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 269974 - 270033 3.9 - Term 269937 - 269970 4.0 303 110 Op 1 . - CDS 270127 - 271467 1596 ## COG0534 Na+-driven multidrug efflux pump 304 110 Op 2 . - CDS 271531 - 272277 1000 ## COG1262 Uncharacterized conserved protein - Prom 272487 - 272546 17.4 + Prom 272492 - 272551 12.3 305 111 Tu 1 . + CDS 272610 - 274616 1693 ## COG3711 Transcriptional antiterminator + Term 274656 - 274699 3.7 + Prom 274646 - 274705 7.1 306 112 Op 1 . + CDS 274726 - 275055 409 ## FN0199 hypothetical protein 307 112 Op 2 9/0.000 + CDS 275095 - 275499 670 ## COG0511 Biotin carboxyl carrier protein 308 112 Op 3 1/0.360 + CDS 275514 - 276656 1762 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit + Term 276702 - 276746 8.5 + Prom 276658 - 276717 10.5 309 113 Op 1 21/0.000 + CDS 276766 - 277731 1514 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 310 113 Op 2 3/0.000 + CDS 277734 - 278537 1288 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 311 113 Op 3 1/0.360 + CDS 278553 - 280307 2596 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) + Term 280323 - 280379 8.1 + Prom 280349 - 280408 8.5 312 114 Op 1 1/0.360 + CDS 280433 - 281692 1529 ## COG0786 Na+/glutamate symporter 313 114 Op 2 4/0.000 + CDS 281723 - 282517 1051 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Prom 282539 - 282598 5.5 314 114 Op 3 2/0.080 + CDS 282638 - 283963 1889 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 315 114 Op 4 . + CDS 283985 - 285133 1541 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 316 114 Op 5 . + CDS 285143 - 285736 750 ## COG3291 FOG: PKD repeat + Term 285747 - 285795 4.3 - Term 285739 - 285779 -0.0 317 115 Tu 1 . - CDS 285791 - 286387 680 ## Lebu_0573 hypothetical protein - Prom 286450 - 286509 8.5 + Prom 286403 - 286462 10.1 318 116 Op 1 . + CDS 286623 - 287366 1059 ## COG1262 Uncharacterized conserved protein 319 116 Op 2 . + CDS 287371 - 289149 2958 ## Alvin_1447 hypothetical protein 320 116 Op 3 . + CDS 289188 - 291488 3200 ## COG0464 ATPases of the AAA+ class + Term 291516 - 291552 4.1 + Prom 291497 - 291556 4.2 321 117 Tu 1 . + CDS 291585 - 292457 986 ## gi|294782344|ref|ZP_06747670.1| hypothetical protein HMPREF0400_00313 + Term 292462 - 292518 5.8 + Prom 292505 - 292564 5.0 322 118 Op 1 . + CDS 292584 - 292802 482 ## FN0210 CopG family transcriptional regulator 323 118 Op 2 . + CDS 292810 - 293076 346 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system + Term 293089 - 293126 3.3 + Prom 293116 - 293175 6.6 324 119 Op 1 . + CDS 293196 - 294686 1946 ## COG1492 Cobyric acid synthase 325 119 Op 2 . + CDS 294706 - 295632 950 ## FN0976 hypothetical protein 326 119 Op 3 . + CDS 295635 - 296606 1043 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB + Term 296646 - 296685 5.4 - Term 296629 - 296678 4.7 327 120 Tu 1 . - CDS 296718 - 296996 388 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 297153 - 297212 11.2 + Prom 297139 - 297198 15.8 328 121 Op 1 . + CDS 297290 - 298639 1238 ## COG0534 Na+-driven multidrug efflux pump + Term 298662 - 298721 2.0 + Prom 298641 - 298700 8.1 329 121 Op 2 . + CDS 298733 - 300100 473 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 330 121 Op 3 . + CDS 300166 - 301059 885 ## FN0821 hypothetical protein + Term 301067 - 301100 5.1 - Term 301053 - 301087 5.3 331 122 Op 1 1/0.360 - CDS 301107 - 302201 1311 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 332 122 Op 2 1/0.360 - CDS 302221 - 303249 1518 ## COG0687 Spermidine/putrescine-binding periplasmic protein 333 122 Op 3 . - CDS 303317 - 304162 916 ## COG0668 Small-conductance mechanosensitive channel - Prom 304298 - 304357 8.4 + Prom 304254 - 304313 14.9 334 123 Tu 1 . + CDS 304369 - 305355 935 ## FN0917 hypothetical protein - Term 305196 - 305249 1.2 335 124 Tu 1 . - CDS 305314 - 305919 385 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 305978 - 306037 7.9 + Prom 305902 - 305961 7.6 336 125 Tu 1 . + CDS 306008 - 306631 619 ## COG1451 Predicted metal-dependent hydrolase + Prom 306661 - 306720 12.6 337 126 Tu 1 . + CDS 306761 - 307573 1330 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 307581 - 307621 8.6 - Term 307568 - 307609 8.8 338 127 Op 1 1/0.360 - CDS 307617 - 308600 1183 ## COG2502 Asparagine synthetase A 339 127 Op 2 . - CDS 308669 - 309958 1731 ## COG1362 Aspartyl aminopeptidase 340 127 Op 3 . - CDS 310032 - 313163 3385 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 341 127 Op 4 . - CDS 313156 - 315852 2127 ## FN1150 hypothetical protein 342 127 Op 5 2/0.080 - CDS 315849 - 316370 586 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 316397 - 316456 17.4 - Term 316420 - 316461 5.2 343 128 Op 1 . - CDS 316469 - 317137 506 ## COG0500 SAM-dependent methyltransferases 344 128 Op 2 . - CDS 317141 - 317743 630 ## FN0850 putative cytoplasmic protein 345 128 Op 3 . - CDS 317744 - 318877 1127 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes - Prom 318910 - 318969 6.4 346 129 Op 1 . - CDS 318987 - 319592 642 ## FN0848 hypothetical protein 347 129 Op 2 1/0.360 - CDS 319670 - 321487 1914 ## COG0457 FOG: TPR repeat 348 129 Op 3 17/0.000 - CDS 321505 - 324849 2704 ## COG0515 Serine/threonine protein kinase 349 129 Op 4 . - CDS 324842 - 325603 853 ## COG0631 Serine/threonine protein phosphatase 350 129 Op 5 1/0.360 - CDS 325609 - 327441 524 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 351 129 Op 6 . - CDS 327453 - 328007 515 ## COG0602 Organic radical activating enzymes 352 129 Op 7 . - CDS 328007 - 328597 872 ## Lebu_0994 FHA domain containing protein 353 129 Op 8 . - CDS 328598 - 330037 1555 ## Lebu_0993 hypothetical protein - Prom 330061 - 330120 12.7 - Term 330110 - 330153 7.1 354 130 Op 1 3/0.000 - CDS 330171 - 330854 886 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 355 130 Op 2 4/0.000 - CDS 330869 - 331741 1210 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 356 130 Op 3 1/0.360 - CDS 331762 - 332637 376 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 357 130 Op 4 9/0.000 - CDS 332641 - 334494 694 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 358 130 Op 5 2/0.080 - CDS 334519 - 335502 309 ## PROTEIN SUPPORTED gi|114773040|ref|ZP_01450335.1| TRAP-type C4-dicarboxylate transport system, periplasmic component 359 130 Op 6 1/0.360 - CDS 335520 - 336521 1191 ## COG1609 Transcriptional regulators 360 130 Op 7 . - CDS 336538 - 337686 1447 ## COG3055 Uncharacterized protein conserved in bacteria - Prom 337734 - 337793 9.3 + Prom 337771 - 337830 12.8 361 131 Tu 1 . + CDS 338075 - 338479 368 ## Lebu_1625 protein of unknown function DUF1722 + Term 338688 - 338726 0.6 Predicted protein(s) >gi|292606589|gb|ADGG01000021.1| GENE 1 1 - 177 91 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|254303988|ref|ZP_04971346.1| ## NR: gi|254303988|ref|ZP_04971346.1| hypothetical protein FNP_1655 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 5 55 1 51 55 95 92.0 1e-18 KCSDLRIINLCDTIYMLGEYSYGGTPSYIPNLEVKPIYADGTWLEAAWESMDLPSNCC >gi|292606589|gb|ADGG01000021.1| GENE 2 284 - 778 724 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782038|ref|ZP_06747364.1| ## NR: gi|294782038|ref|ZP_06747364.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 164 1 164 164 175 100.0 8e-43 MKEKKIENEIEKLEEQIATLIALRKEKISQSSRNFSKIWNILKRKETTENEIEKLEKEIS SLSKELSALKVKISKPFGDLRSEIKNELKAYFIQKILNKPESTIIFNNINSIIDEIMKEI SATGKFLNKSEIKESIKNEMLRKLKENFDFIEDKNTNTLEAFKN >gi|292606589|gb|ADGG01000021.1| GENE 3 858 - 1088 397 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782039|ref|ZP_06747365.1| ## NR: gi|294782039|ref|ZP_06747365.1| hypothetical protein HMPREF0400_00002 [Fusobacterium sp. 1_1_41FAA] # 1 76 1 76 76 137 100.0 2e-31 MATLNPRAQIALVLAQIEREYSKGMEFFLEDLSTVQNCVSYSNYQTFFNLLRNNADLTKL VMRVGTVSGKNKYRRK >gi|292606589|gb|ADGG01000021.1| GENE 4 1136 - 2071 1167 311 aa, chain - ## HITS:1 COG:no KEGG:FN0493 NR:ns ## KEGG: FN0493 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 311 1 309 309 414 74.0 1e-114 MKDMRLLKLYNRLLKNDDIDVEEYAKENGVSTRTVERDIKCIKDFLADNEDKSRELIRIK RKKKYQLSYSEDSINLTKSEILAISKILLASRAFLKDEISLIIDKIVKQCGPGQDLDLIQ ELLKNEKFHYIELQHKKSFINCIWDLGEAIKDKKKVEIAYKKMDGNTVRRVIDPVGLMFS EYYFYLLAHIENIDKEKYFCNKDDEYPTIYRLDRIEDFEVLKEKYVPTLYKNRFQEGLFR KQVQFMTGGKLRKLKFIYRGSSIEALLDKIPTAKAKEIDKNIYEIKAEVFGNGIDRWILS QGDAIKIIEDN >gi|292606589|gb|ADGG01000021.1| GENE 5 2335 - 3054 266 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 235 4 238 242 107 31 8e-22 MNRLEGKIAVVTGSARGIGRAIVEKLAAHGAKMVISCDMGESSYEQANVVHKILNVTDRE AIKTFVDEVEKEYGKIDILVNNAGITKDGLLMRMTEDQWDAVINVNLKGVFNMTQAVSRS MLKARKGSIITLSSVVGLHGNPGQTNYAATKGGVIAMSKTWAKEFGARNVRANCVAPGFI QTPMTDVLPEETIKGMLDATPLGRLGQVDDIANAVLFLASDESAFITGEVISVSGGLML >gi|292606589|gb|ADGG01000021.1| GENE 6 3113 - 4321 1973 402 aa, chain + ## HITS:1 COG:FN0495 KEGG:ns NR:ns ## COG: FN0495 COG0183 # Protein_GI_number: 19703830 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Fusobacterium nucleatum # 1 402 1 402 402 697 90.0 0 MSKVYVVAAKRTAIGSFLGTLSPLKPGELGAKVVKNIIEETGIDPANIDEVIVGNVLSAG QAQGVGRQVAIKAGIPYEVPAYSINIICGSGMKSVITAFSNIKAGEADLVIAGGTESMSG AGFILPGTVRAGHKMADLTMKDHMILDALTDAYHNIHMGITAENIAEKYNITREEQDEFA LDSQKKAIAAVDSGRFKDEIVPVVIPNKKGDITFDTDEYPNRKTDLEKLAKLKPAFKKDG SVTAGNASGLNDGASFLLLASEEAVKKYNLKPLVEIVSTGTGGVDPLIMGMGPVPAIRKA LKKADLKLQDMQLIELNEAFAAQSLGVIKELCTEHGVTADWFKDKTNVNGGAIAIGHPVG ASGNRITVTLIHEMKKTGVEYGLASLCIGGGMGTALVLKNVK >gi|292606589|gb|ADGG01000021.1| GENE 7 4444 - 4989 844 181 aa, chain - ## HITS:1 COG:FN1078 KEGG:ns NR:ns ## COG: FN1078 COG2849 # Protein_GI_number: 19704413 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 181 1 181 181 270 95.0 1e-72 MNNQYNKDGKKEGLWVKIYDNGVVQEERNYVNGVREGVYKSYYMNGEVEIIKNYKNGNLH GKYQTFYSDGKLNSEYNLVDGRKVGDYKEFYPNGILKRETVYVNDGTTSKNIKYFPNGKI KLEVNFVDGHMEGPYKEYHSNEKLFKECFYNEKGKLEGNYKEYDVEGNLLKEVTYKNGVE I >gi|292606589|gb|ADGG01000021.1| GENE 8 5178 - 6227 684 349 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 [Bacillus selenitireducens MLS10] # 9 349 16 358 360 268 40 3e-70 MTKQDLMDIIIKVAPGSPLREGIDYILDAGIGALIVIGYDDAVEKVKDGGFSINCDYTPE KIFELSKMDGAIIINDDCSKILYANVHIQPDTSFTTTESGTRHRTAERVAKQLKREVVAI SERKKNVTLYKGNLKYRLKNFDELNIEVGQVLKTLESYRYVLNRSLDNLTILELDDLVTV LDVANTLQRFEMVRRISEEITRYLLELGARGRLVNMQVSELIWDIDDEEEGFLKDYLDTD TKPESVRRYLHTLSDAELLDIENIVVALGYTKSSSVFDNKVAARGYRVLEKISKLTKKDI EKITSTYKDISEIQELTDEDLAAIKISKFKIKALRAGINRLKFTIEMQR >gi|292606589|gb|ADGG01000021.1| GENE 9 6220 - 7602 1717 460 aa, chain - ## HITS:1 COG:FN0157 KEGG:ns NR:ns ## COG: FN0157 COG1066 # Protein_GI_number: 19703502 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Fusobacterium nucleatum # 1 460 1 452 452 754 93.0 0 MAKGSVYYCSECGYKSVKWAGKCPQCGAWSSFEEVEEMPRDVKKATSSVSVASRASDIKV YEFKDVEYNKEDRYKTKYEEFDRLLGGGLLKGEVVLVTGNPGIGKSTLLLQVANSYKDYG DVLYISGEESPAQIKNRGERLKISGDGIYIMAEMDILNIYEYVVSKKPKVVIVDSIQTLY NSSMDSISGTPTQIRECTLKIVEIAKKYNISFFIVGHITKDGKVAGPKLLEHMVDAVFNF EGDEGLYYRILRSEKNRFGSTNEIAVFSMEENGMKEIKNSSEYFLSEREEKNIGSMVVPI LEGTKVFLLEVQSLITDSGVGIPRRVVQGYDRNRIQILTAIAEKKLYLPLGMKDLFVNVP GGLAIEDPAADLAVLISILSVYKGVSISQKIAAIGELGLRGEIRKVFFLERRLKELEKLG FTGVYVPESNQKEIEKKKYKLKIIYLKNLDELLERMNKND >gi|292606589|gb|ADGG01000021.1| GENE 10 7605 - 7790 89 61 aa, chain - ## HITS:1 COG:FN0156 KEGG:ns NR:ns ## COG: FN0156 COG0669 # Protein_GI_number: 19703501 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheine adenylyltransferase # Organism: Fusobacterium nucleatum # 4 61 106 163 163 100 86.0 5e-22 MQIKKLSNGEVDTVFIPTSERYTYVSSTFVKELAFYNQSLEGYVDGKIIEEVLNRAKEYR G >gi|292606589|gb|ADGG01000021.1| GENE 11 7762 - 8097 229 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 107 4 109 164 92 45 3e-21 MKIAVYAGSFDPVTKGHQDIIERALKIVDKLIVVVMNNPKKNYWFNLDERKNLISKIFEG SENIKVDEHAGLLVDFMAKNSCGILIKGLRDVKDFSEEMTYSFANKKTFKW >gi|292606589|gb|ADGG01000021.1| GENE 12 8118 - 9359 1490 413 aa, chain - ## HITS:1 COG:no KEGG:FN0155 NR:ns ## KEGG: FN0155 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 413 1 413 413 493 80.0 1e-138 MIKKIIFFLVFSVVSLAQQIELKSIEKTISVDGQNYTTTLSQNYDEKDKKLEILYIEKGD YPFGTKEIIQFDAEGNKELSKEKFKYNISTGNWNKDYKSVTTYEKNKKIEETYMAEENKW TEYMKYEKENTNDSETYIIYNFKNKKWNPSTKTYTLLNKNKKDNIIELYTWNKNKQKWEL ESKSIYTYNQEGELEETVIYKKEDNWVAKQKLKYYTDNKGNEIYSDLFLENGEWIEQDKT VTEFDKVNNKKVTITQQLNKETKQLENTRRFIQTYKNDMIEQGVQYSWDKDEKKWYKNYE QNFFYNENKKLIRQQAFFNDGSGVQFTYKFDKNGNNIEILTENLNTKTKLWKNYEKTEYL YDLSIEKDEVIDRGHIIDEKEDSVNLILEKKYYLYDGKKWILTEKTKYLYDKK >gi|292606589|gb|ADGG01000021.1| GENE 13 9385 - 9873 338 162 aa, chain - ## HITS:1 COG:FN0154 KEGG:ns NR:ns ## COG: FN0154 COG1530 # Protein_GI_number: 19703499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Fusobacterium nucleatum # 1 162 297 458 458 212 74.0 2e-55 MIFNTNLEACEEIARQIKLRNLAGIIIIDFIDLKKISDRKKILEELKRYLKKDRMEINSL DFSHLGLVQFTRKRQGKELSFYYREKCLYCEGTSYLLSKDRIILNLLADLNSQIKYNDLN KIVVKTKKDIIKELKKLISNPKIEFVEDSSFYKEGYRIELYD >gi|292606589|gb|ADGG01000021.1| GENE 14 10056 - 10760 799 234 aa, chain - ## HITS:1 COG:FN0154 KEGG:ns NR:ns ## COG: FN0154 COG1530 # Protein_GI_number: 19703499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Fusobacterium nucleatum # 1 233 1 233 458 244 69.0 9e-65 MSKCLILSKNTYEAKLALLEDDKLEEIYIERDKEKEISGNIYKGKIVDILNKGEIIFVDI GLEKNAFLSFENKKNIPKFNISDSLIVQVETEARDGKGARLTLDYSINGENLILLPNSKN LSISKKIEDLEIVKKLKDTFLNIDKGLILRTKSVEKSSDNLLEEYKKLEAIDNQIKKDFK EKNTTLLYDNNSILKKALTLLDENIDEFIIDDEDSFNKIKNTLEENKKNYLLKN >gi|292606589|gb|ADGG01000021.1| GENE 15 10753 - 11781 942 342 aa, chain - ## HITS:1 COG:FN0153 KEGG:ns NR:ns ## COG: FN0153 COG1243 # Protein_GI_number: 19703498 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Fusobacterium nucleatum # 1 342 1 342 348 597 90.0 1e-170 MKHYNIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLKTLPKNSIKEVAF FGGTFTGISMELQKQYLEVVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVKTIELG IQSLDDEVLKATGRHYNYEIVKKSCDLIKKYGFTLGVQLMIGLPKSDFKSDLMSAVKSLD LNPDIARIYPTLVIKGTELEFMYKRNLYNSLTLEEAVNRTVPIYSLLELKDINVIRVGLQ PAEDLTADGVIISGPFHPAFRDLVENKIYFNFLSKIYEKEKKLDIEVNERNISKIVGQKA STKKTFYPNFKITINNNLALNELIINAKKYERKEILKGELNE >gi|292606589|gb|ADGG01000021.1| GENE 16 11768 - 12472 849 234 aa, chain - ## HITS:1 COG:FN0152 KEGG:ns NR:ns ## COG: FN0152 COG0571 # Protein_GI_number: 19703497 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Fusobacterium nucleatum # 1 234 1 234 234 372 86.0 1e-103 MKNLLDLEHKLNYYFNNRNLLKTALLHKSLGNEKKEYKNQNNERLELLGDAVLDLIVAEY LYRNYKSASEGTIAKLKAMIVSEPILAKISRQIGLGKFLMLSKGEILSGGRNRESILADA FEAVLGAVYMDSNLEDARSFALNHIEQYITHIEEDEDILDFKSILQEYVQKNFKTVPTYE LISEKGPDHMKEFEIQVVVGKYKEKAIAKNKKKAEQLSAKALCVKLGVKYHEAL >gi|292606589|gb|ADGG01000021.1| GENE 17 12487 - 13728 1870 413 aa, chain - ## HITS:1 COG:FN0151 KEGG:ns NR:ns ## COG: FN0151 COG0304 # Protein_GI_number: 19703496 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Fusobacterium nucleatum # 1 413 1 413 413 746 96.0 0 MKRVVVTGLGLISSLGIGLEESWKKLIAGETGIDLITSYDTTDQPVRIAGEVKGFEPTDY GIEKKEVKKLARNTQFALVATKMALDDANFKIDETNADDVGVLVSSGVGGIEVMEEQYGA MLSKGYKRISPFTIPAMIENMAAGNIAIYYGAKGPNKSIVTACASGTHSIGDGFDLIRHG RAKAMIVGGTEASVTQFCINSFANMKALSTRNETPKTASRPFSKDRDGFVMGEGAGILIL EELESALARGAKIYAEMVGYGETCDANHITAPIETGEGATKAMRIALKDANLSLDDVTYI NAHGTSTPTNDVVETRAIKALFGDKAKDLYISSTKGATGHGLGAAGGIEGVIIAKAIADG VIPPTINLHETEEECDLNYVPNQAIKTDVKVAMSNSLGFGGHNSVIVMKKFEK >gi|292606589|gb|ADGG01000021.1| GENE 18 13823 - 14050 490 75 aa, chain - ## HITS:1 COG:FN0150 KEGG:ns NR:ns ## COG: FN0150 COG0236 # Protein_GI_number: 19703495 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Fusobacterium nucleatum # 1 75 1 75 75 105 96.0 2e-23 MLDKVREIIVEQLGVEADQVKPESNFVDDLGADSLDTVELIMSFEEEFGVEIPDTEAEKI KTVQDVINYIEANKK >gi|292606589|gb|ADGG01000021.1| GENE 19 14130 - 15023 1374 297 aa, chain - ## HITS:1 COG:FN0149 KEGG:ns NR:ns ## COG: FN0149 COG0331 # Protein_GI_number: 19703494 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Fusobacterium nucleatum # 1 297 1 297 299 488 89.0 1e-138 MGKIAFVYPGQGTQFVGMGKELYENNLKAKELFDKIFSSLDIDLKKVMFEGPEDLLKRTD YTQPAIVSLSLVLTELLKETGVKPDYVAGHSVGEFAAFGGANYLSVEDAVKLVAARGRIM KEVAEKVNGSMAAVLGMDAEKIKEVLKSVDGVVEAVNFNEPNQTVIAGEKEAIEKACVAL KDAGAKRALPLAVSGPFHSSLMKEAGEQLKVEAQNYNFNIADVKIVANTTAELLETDAEV KEEIYKQSFGPVKWVDTINKLKALGVTKIYEIGPGKVLAGLIKKIDKEIEVENIEII >gi|292606589|gb|ADGG01000021.1| GENE 20 15053 - 16039 1480 328 aa, chain - ## HITS:1 COG:FN0148 KEGG:ns NR:ns ## COG: FN0148 COG0332 # Protein_GI_number: 19703493 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Fusobacterium nucleatum # 1 328 1 328 328 581 87.0 1e-166 MQSIGIKGVGYYAPENVFTNFDFEKIIDTSDEWIRTRTGITERRFATKEQATSDLACEAS LKAIESAKIKKEDIDLIILATVTPDYLAQGAACIVQHKLGLSNIPCFDLNAACTGFIYGL EVGYSMVKSGLYKNVLVIGAETLSRIIDMQNRNTCVLFGDGAAAAVVGEVEEGYGFLGFS IGAEGEDDMILKIPAGGSKKPNDDETIKNRENFVVMKGQDVFKFAVNILPKVTLDALEKA KLDVSELSMVFPHQANSRIIESAAKRMKFPIEKFYMNLSRYGNTSSASVGLALGEAVEKG LVKKGDNVALTGFGGGLTYGSAIIKWAF >gi|292606589|gb|ADGG01000021.1| GENE 21 16039 - 17037 1196 332 aa, chain - ## HITS:1 COG:FN0147 KEGG:ns NR:ns ## COG: FN0147 COG0416 # Protein_GI_number: 19703492 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Fusobacterium nucleatum # 1 332 1 332 332 538 91.0 1e-153 MKIALDAMSGDFAPISTVKGAVEALNEIENLEVILVGKESIIKEELKKYKYDTKRIEIKN ANEIIEMTDDPVKAVREKKDSSMNVCIDLVKDKIAQASVSCGNTGALLASSQLKLKRIKG VLRPAIAVLFPNKKDQGTLFLDLGANSDSKPEFLNQFATMGSKYMEIFLNKKNPKVALLN IGEEETKGNELTRETYILLKQNKDIDFQGNIESTKIMDGEVDVVVTDGYTGNVLLKTSEG VGKFIFHVVKESVMESWISKIGALLMKGAIKKVKKKTEASEYGGAIFLGLSELSLKAHGN SDSRAIMNALKVASKFIELNFIEELRKTMEVE >gi|292606589|gb|ADGG01000021.1| GENE 22 17260 - 18003 840 247 aa, chain + ## HITS:1 COG:no KEGG:FN0721 NR:ns ## KEGG: FN0721 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 245 1 238 239 320 72.0 2e-86 MKRKLFLIFSLFLIFSLYAFAENFPQKAKSINDFVPKGWKILKDENGSNFIAKGDLNKDK LEDIAIIIEKNDKKNIKKNESLGPDELNLNPRILLVLFKEKDGTYALAAKNDKGFIQSEG NEETPTLMDTLSGISIENNVLKIVFNYFLSAGSWWTSTEVYIFRFQNNRFELIGYENNGF MRNSGEEEGVSINFSTNKKKTTTGGNAFAGNENNPKDEWYNIKIEKKYTLDEMTINTIDE ILEIIDY >gi|292606589|gb|ADGG01000021.1| GENE 23 18048 - 18611 898 187 aa, chain - ## HITS:1 COG:FN0720 KEGG:ns NR:ns ## COG: FN0720 COG0231 # Protein_GI_number: 19704055 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Fusobacterium nucleatum # 1 187 1 187 187 349 100.0 2e-96 MKIAQELRAGSTIKIGNDPFVVLKAEYNKSGRNAAVVKFKMKNLISGNISDAVYKADDKM DDIKLDKVKAIYSYQNGDSYIFSNPETWEEIELKGEDLGDALNYLEEEMPLDVVYYESTA VAVELPTFVEREVTYTEPGLRGDTSGKVMKPARINTGFEVQVPLFVEQGEWIKIDTRTNE YVERVKK >gi|292606589|gb|ADGG01000021.1| GENE 24 18623 - 19663 1011 346 aa, chain - ## HITS:1 COG:FN0719 KEGG:ns NR:ns ## COG: FN0719 COG4394 # Protein_GI_number: 19704054 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 346 1 346 350 475 80.0 1e-134 MLIDNIDIFCEVIDNYGDVGVAYRLARELKRIYPNKRLRFIINKTEELNLIKKTDDITVI DYKDINKIESPADLIIETFACNIPEIYMDKALKSSKLMINLEYFSSEDWVDDFHLQESFL GGNLKKYFFIPGLSEKSGGVILDKEFLDRKNKVQENREYYLKQFNIDEKYDLIISVFSYE KNFDNFLKTLQKLDKKVLLLLLSEKTQKNFIKYFDNNDYYDKIKAVKLPFFTYDKYEELL ALCDVNLVRGEDSFVRALLLGKPFLWHIYPQDENTHIIKLESFLEKYCPNNKELRETFIN YNINKDHFSYFFKNLDEIKKYNEKYSDYLIENCNLIDKLINFIEKI >gi|292606589|gb|ADGG01000021.1| GENE 25 19663 - 20076 549 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782057|ref|ZP_06747383.1| ## NR: gi|294782057|ref|ZP_06747383.1| glycosidase CRH1 [Fusobacterium sp. 1_1_41FAA] # 1 137 1 137 137 94 100.0 2e-18 MKKNIILIISSLFLATACTTSFGIGTGFGLGGSSSGVSVGTGVSVEKKIPTKKDTKKKVE TKTSGNSHTNSNTKSTVKKTTDHPANTSKKAVEDKTQVKTEKNEVTASTTILETNTTTKS TETSLTIPKRVKQERQQ >gi|292606589|gb|ADGG01000021.1| GENE 26 20089 - 20769 873 226 aa, chain - ## HITS:1 COG:FN0717 KEGG:ns NR:ns ## COG: FN0717 COG1187 # Protein_GI_number: 19704052 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Fusobacterium nucleatum # 1 226 1 226 226 346 84.0 2e-95 MRLDRFLVECGIGSRKEVKKIISANEIKVNGSYDISAKDNINEYSDVIEYNGERLEYKKF RYYIMNKKAGYITATEDIREATVMDLLPEWVIRKDLAPVGRLDKDTEGLLLLTNDGKLNH RLLSPKNHVDKTYYVEIENNISQEDVLKLEEGVDIGNYITLPAKVEKISDTKIYLTIKEG KFHQVKKMLEAVNNKVTYLQRTTFAKLSLADLALGEVKEVNLEDII >gi|292606589|gb|ADGG01000021.1| GENE 27 20769 - 21656 957 295 aa, chain - ## HITS:1 COG:no KEGG:FN0716 NR:ns ## KEGG: FN0716 # Name: not_defined # Def: phophatidylinositol-4-phosphate 5-kinase (EC:2.7.1.68) # Organism: F.nucleatum # Pathway: not_defined # 1 295 1 314 314 281 54.0 2e-74 MKKDFKQFIILLIISIFVAFTVSFAYSVYQNYQREKKINQVKSLFDLGGSSEDKKEEVPK PEEVNSKDSWNNLIISEIEKDYILDDTRPFYKRLYDKIIGKKIYNYKSIDNENKTLIVEM NDNKITQKFFDSGKEVLEKELIANDDFSSYDLKAHNIDEEYTATFKDMLGKDTYLNTKNG LIEYQDGRKIEFIHKATLMNGPAIEYLANGDKIEFNYVNGKRYGEAQKFYANGDKEDFFY GNNEKKNGASIYYFANGEREEVAYKDDVLEGPAIYIFNDGIAEHYEYKNGKRVED >gi|292606589|gb|ADGG01000021.1| GENE 28 21640 - 22506 1094 288 aa, chain - ## HITS:1 COG:no KEGG:FN0715 NR:ns ## KEGG: FN0715 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 278 1 274 290 301 59.0 2e-80 MSMTNYIIVMKTLEDGKFLITFPDFEGLTATADSEENIQSVATETIKTKLAELKKDNLVI PEAKKMKDVSSTLNEGEFTTYIPVKEEFDFKTTMNSTMANFKDKESFKKGTEDLKNKATE LTNNIPKGSENLFGIIGGVIAIINTFLLAVFSVKVPIFGDYSIGFFKGLGILADFSKEAK NAQAILLFAGILFTALAGLLIYSSIIKNKNILLYSIIGNAVFLVIFYIILFVKLPGGEAG KYISVSFFKILLYLVALVLAFISYFLLNKVEENKTSTNNGDDRNEEGL >gi|292606589|gb|ADGG01000021.1| GENE 29 22543 - 23292 840 249 aa, chain - ## HITS:1 COG:no KEGG:FN0715 NR:ns ## KEGG: FN0715 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 245 1 264 290 177 42.0 4e-43 MTTKNYIAVAKYLEDNTILLSFPDFEGLTATADSEENIQNIAAKAIKSKLAELKNSNIEA PEPKKITEVSKNLQEGEFTTYIPVTETPSFNTLKDNETLKDVSNKVDNFINKDIKKSIPV GKEHFLGIGGAILAILNTLIFPVYTITGFFGFGGGGANFFQMNALYMLFGLAFLAFAGAT IYASLNRDMKILQISTLGILGTFVLCYLLVFITALTNSYLSVGIIKFILYAISVAVIYSG YRILNSLND >gi|292606589|gb|ADGG01000021.1| GENE 30 23371 - 24318 1257 315 aa, chain - ## HITS:1 COG:FN0714 KEGG:ns NR:ns ## COG: FN0714 COG1902 # Protein_GI_number: 19704049 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Fusobacterium nucleatum # 1 314 1 314 314 582 92.0 1e-166 MEKINIFTDFKIKNIHIKNRIVLPPMVRFSLVKDDGYVTEDLINWYGMIARSGVGLIIVE ASAVEESGKLRENQIGIWNDSFIEGLTKVANEIHKYDVPCMIQIHHAGFKDKIVEVHEEE LDRILKLFEEAFIRAKKCGFDGIEIHGAHTYLISQLNSKLWNKRTDKYGERLYFSRKLIE NTRYLFDDNFILGYRMGGNEPELEDGIENAKELESYGLDILHVSSGVPNPEYKRQVKIST FPKDFPLDWIIYMGTEIKKHVKIPVIGVSKIKKESQASWLVENNLLDFVAVGKAMISQDR WMEKARKDFMLKNRH >gi|292606589|gb|ADGG01000021.1| GENE 31 24329 - 24859 485 176 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 175 1 175 176 213 80.0 1e-55 MTYLKLFLVFFKVGLFSFGGGYAILPLMQHEVVDINKWISFHEFMEIVAVSQITPGPISI NLATHVGYRIAQTMGSTIATFSVVLPSIIIMTIIVVFLKKFSNLPVVKRTFAALRITVVG LILAAAVALFVKDNFIDYRSYIIFASVLIGGLFFRIGSITLIISSGLAGLLLYYIF >gi|292606589|gb|ADGG01000021.1| GENE 32 24856 - 25428 495 190 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 186 1 186 186 264 81.0 6e-71 MKKNKIIDIFILFFKIGAFTIGGGYAMLSLIEDEIVNKKNWLEKEEFVDGMAIAQSIPGV LAVNISLITGYKIAGFLGMFAGMLGAVLPSFFIVLFLSQILLAIGNHPIIVAIFNGIKPA IAALILISVYRIAKSANINRYTFIFPIIIAVLIRYLGVSPIIIIIATMILGNIYFLFKEK SKKEKEDDVQ >gi|292606589|gb|ADGG01000021.1| GENE 33 25415 - 26635 1612 406 aa, chain - ## HITS:1 COG:FN0711 KEGG:ns NR:ns ## COG: FN0711 COG0452 # Protein_GI_number: 19704046 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Fusobacterium nucleatum # 1 404 1 404 404 611 82.0 1e-175 MKNILVGVTGGIAAFKSASIVSLLKKKGYNVKVIMTENATNIIGPLTLETLSKNRVYVDM WDKNPHYEVEHISLADWADIVLIAPATYNMIGKVANGIADDMLSTVLSAVSLRKPIFFAL AMNVNMYENPILNENIDKLKTYGYRFIDTNEGLLACNYEAKGRMKEPEEIVDIIERYNIA SKIDNFRDALKGKKILITSGRTREDIDPIRYLSNKSSGKMGYSLAQAAVDLGAEVTLVSG PTNLNVPDGLKEFISVDSAIHMYEKVDEKFKDTDIFIACAAVADYRPKEYQDKKIKKSDL NLTIELVRNPDILFEMGKKKENQLLVGFAAETNNIIENALKKLEKKNLDMIVANNASTMG TDTNSIEIIRKDRSSTVINQKSKIELAYDILKEVILDLKKAKDEEK >gi|292606589|gb|ADGG01000021.1| GENE 34 26632 - 27309 801 225 aa, chain - ## HITS:1 COG:no KEGG:FN0710 NR:ns ## KEGG: FN0710 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 224 1 224 225 204 58.0 2e-51 MGLADLLFKEKEEKYLKQIEDLQNYLSIQEDQIADLKLQLEAVTKERDGRINSKQLEIFE KNFKHNIEVAKKYRSIIDSYNLDTEKKSYKYRVDLKHFYSEKKFEEVVKFLNEDNKFFID ELTEEIFDNVSKDAKNNNKAKQRFIDFKNGKMEWAITTLMNKGEELSKIYSKSRKLMTIF SELYFEYLDDIADFDFMTLKSQGFNISEIEEFILKRDNYYKERRK >gi|292606589|gb|ADGG01000021.1| GENE 35 27376 - 28851 578 491 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 [Vibrio campbellii AND4] # 1 421 3 434 520 227 31 5e-58 KKMLKKSINTMIITMVSRVLGLFRGTLVAYFFGASVLTDAYYSAFKISNFFRQLLGEGAL GNTFIPLYHKKKKEEGEERSREYIFSVLNITFLFSFVISVLMIIFSSYIIDFIVVGFSDE LKMVASRLLKIMSFYFLFISLSGMMGSILNNFGYFAIPASTSIFFNLSIIFSAMWLTKYF SIDALAYGVLIGGVLQFLVVFFPFIKLLKSYSFKIDFKDMYLKLLGIKLIPMLVGVFARQ VNTIVDQFFASFLVAGSITALENASRVYLLPVGVFGVTISNVLFPSISRAAANGDKEDTN RRLVSAINFLNFLTIPSLFVLTFFSKDVIRLIFSYGKFNEDAVKITSECLLYYSLGLIFY VGVQLVSKGYYAMGDNKRPAKFSIIAIIMNIVLNYLFIKNFQHKGLALATSISSGVNFFL LLFMYIKLYVKLDLKNIIATTIKICISSVIATALAFYVNNVILKLVIFSAVFLLQWAYPI YKYREKVFYKK >gi|292606589|gb|ADGG01000021.1| GENE 36 28839 - 29516 697 225 aa, chain - ## HITS:1 COG:FN0708 KEGG:ns NR:ns ## COG: FN0708 COG1354 # Protein_GI_number: 19704043 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 225 1 225 225 311 89.0 7e-85 MEELVVKVNNFEGPFDLLLNLIEKKKMMISDINISQLIDEYLEVLKLSERENIEIKSDFI IIASELIEIKTLNLLNLDSDKEKETNLKRRLEEHKLFKELTPKVANLEKEFNISYSRGES KRTIKKIAKDYDLTSLTTDDIFDVYKKYFDSVDMSEFMELNLIKQYDIKEIMDNLLIKVY FKNWLIDDLFLEAENKLHLIYIFLAILELYKDAKINIDDGEIRKC >gi|292606589|gb|ADGG01000021.1| GENE 37 29491 - 30447 398 318 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 19 305 20 311 317 157 33 4e-37 MIVVNDILTSNIEFEDTYVAIGNFDGVHYGHKKLINETIKAARENSKKAVVFTFEKHPLE FLFPERKFDYINTNEEKLYLLESLGVDVVIMQKLDKNFLEYTPLEFVRILKNKLKVKEIF VGFNFSFGKGGLGTAEDLEYLAEVHNIKVNELPPVTLDGELVSSSAIRKKIANSDFDGAI KLLDHPMIVIGEVIHGKKIARQLGFPTTNIKMDNRLYPPSGIYGAFLQVSDKNSKVLYGV VNIGYNPTLKQEMSLEVHILDFDREVYGEKLYIQIVKFMREEKKFSSIDELKATIQADVD RWKLFKREMKYGRTSSKS >gi|292606589|gb|ADGG01000021.1| GENE 38 30460 - 31356 749 298 aa, chain - ## HITS:1 COG:FN0706 KEGG:ns NR:ns ## COG: FN0706 COG1481 # Protein_GI_number: 19704041 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 298 1 298 299 432 87.0 1e-121 MSYSSNVKQEITQKIPVTNLECLAEISSIFENKANLVKEGIEIKMENSILAKRLYSLIKA TSSLQFGIKYSITKKFTEHRIYVITLYKQKGLKEFLESFKFSFLDIIQNDEIFRGYLRGF FLSCGYIKDPKKEYSLDFFVDNKELADKIYNILLSKKKKIFKTIKKNKILVYLRNSEDIM DILVSMNALKYFFEYEEITIIKNLKNKTIREMNWEVANETKTLNTGNYQIKMIKYIDEKL GLNTLTDVLKEAAMLRLNNPEDSLQSLADMINISKSGIRNRFRRIEEIYNNLLEEENS >gi|292606589|gb|ADGG01000021.1| GENE 39 31369 - 34119 3503 916 aa, chain - ## HITS:1 COG:FN0705_2 KEGG:ns NR:ns ## COG: FN0705_2 COG0749 # Protein_GI_number: 19704040 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Fusobacterium nucleatum # 416 916 1 501 501 812 88.0 0 MKRAVLLDVSAIMYRAYFANMNFRTKNEPTGAVYGFINTLLSIIKEFNPDYMAAAFDVKR SSLKRTEIYSDYKSNRQSTPEDLVAQIPRIEEVLDAFNINRYRIESYEADDVLGSIAKKI AKDDLEVIIVTGDKDLSQLVEKNITIALLGKGTEGEKFGMLRTAEDVVNYLGVVPEKIPD LFGLIGDKSDGIPGVTKIGEKKALAIFSKYDSLEKIYENIDDLKNIEGIGPSLIKNLTNE KDIAFLSRELAKIFTNLDIDIEEENLKYSMDKEKLYELCKILEFKMFIKKLNLEEKTQTS NSDHKPVLLSLFDKVEEVEKTEKVEKEIVYEKELNINFSNRELVIIDNETLLNEQKEYLN NYKKIASIYYEELGIILSTEEKDLYFPLNHGGLLSKNIDKNTLIKFISELDVKFISYNFK TLLNLGFTFKSMYMDMMIAYHLISSQTKMDVIIPITEYSNVDAKDFKTTFGKAHIETLLV GEFAGYLSKIGLGILAIYDEINHILHKEELYDILIQNEMPLIPVLSLMERKGIKIDVSYF KNYSSELEKELAKIEKSIYEEAGEEFNINSPKQLGDILFVKMNLPSGKKTKTGYSTDVMV LEDLESYGYNIARLLLDYRKLNKLKTTYVDTLPNLVDSNSRIHTSFNQIGTATGRLSSSE PNLQNIPVKTDDGIKIREGFVAGEGKVLMSIDYSQVELRVLTSMSKDENLIEAYREEKDL HDLTARRIFNLSDSDDVTREQRTIAKIINFSIIYGKTAFGLAKELKIPVKDASEYIKKYF EQYPRVTTFEKEVIEFGEEHGYVKTLFGRKRYISGIDSKNKTIKAQAERMAVNTVIQGTA AEVLKKVMLKVYETLKDKDDIALLLQVHDELIFEVEESSVEKYSEILADIMKNTVKLEDV NLNININIGKNWAEAK >gi|292606589|gb|ADGG01000021.1| GENE 40 34422 - 34679 303 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782072|ref|ZP_06747398.1| ## NR: gi|294782072|ref|ZP_06747398.1| hypothetical protein HMPREF0400_00037 [Fusobacterium sp. 1_1_41FAA] # 1 85 5 89 89 116 100.0 6e-25 MKLEDLFSLKKELSYDYEVIFQLNNKTVTILVTDEDEEGDEIEFSYKLNLLINLAEQYNY SLDKVTEFATCEADDITMLIFKRDR >gi|292606589|gb|ADGG01000021.1| GENE 41 34855 - 35049 485 64 aa, chain + ## HITS:1 COG:FN0244 KEGG:ns NR:ns ## COG: FN0244 COG2608 # Protein_GI_number: 19703589 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Fusobacterium nucleatum # 10 64 1 55 56 80 87.0 5e-16 MKLNLKIDGMGCEHCIKSVREALEGISGVKVIDVKIGSAEVEAENDSVLNEIREKLDDAG YDLV >gi|292606589|gb|ADGG01000021.1| GENE 42 35084 - 36709 2269 541 aa, chain + ## HITS:1 COG:FN0245 KEGG:ns NR:ns ## COG: FN0245 COG2217 # Protein_GI_number: 19703590 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 1 538 1 537 769 867 89.0 0 MENDIKLGTELDDRQEKDNKKLELKIDGISCQACVAKIERKLSRTDGVEKALVNISNNMA DIEYDEKEIKASEIMKIIEKLGYTPKRREDLKDKEEAIRAEKKLKSELTKSKIAIVLSLI LMYISMSHMFGLPVPHIIYPVDHIFNYVVIQFIIAVTVMIIGKRFYKVGFRQLFMLSPNM DSLVAVGTSSAFIYSLYISYKIFADNNIHLMHSLYYESAAMIIAFVMLGKYLETLSKGKA SAAIKKLVNFQAKKANIIRNGEIVEIDINEVSKGDIVFIKPGEKIPVDGTIIEGHSTIDE AMITGESIPVEKLENDKVYSGSINKDGALKVVVNATEGETLISKIAKLVEDAQMTKAPIA RLADKVSLIFVPTVIFIAIFAALLWWFLIKYNVVSVSQNHFEFVLTIFISILIIACPCSL GLATPTAIMVGTGKGAELGILIKSGEALEKLNEIDTIVFDKTGTLTEGTPKVIDIVSIGN ALSKDEILKIAASMEVNSEHPLGKAVYDEAKEKNVELYDVKKFLSISGRGVIGEIEEKNI Y >gi|292606589|gb|ADGG01000021.1| GENE 43 36801 - 37394 674 197 aa, chain + ## HITS:1 COG:FN0245 KEGG:ns NR:ns ## COG: FN0245 COG2217 # Protein_GI_number: 19703590 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 1 197 573 769 769 338 89.0 5e-93 MADEEKLIAFITLADVVRNESIKLIEKLKKENIKTYMLTGDNERTAKVIAKKLGIDDVIA EVSPEDKYKKVKDLQEQGRKVVMVGDGVNDSPALAQADVGMAIGSGTDIAIESADIVLMS KDIETILTAIRLSKATIKNIKENLFWAFFYNSCGIPIAGGLLYLFTGHLLNPMLAGLAMG LSSVSVVTNALRLKRFK >gi|292606589|gb|ADGG01000021.1| GENE 44 37675 - 37944 378 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782073|ref|ZP_06747399.1| ## NR: gi|294782073|ref|ZP_06747399.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 89 1 89 89 139 100.0 4e-32 MFNLEYFANDNYKVLKFLYDNQIQVKDEYYIVLSQQEIADMVQFSKLKTNGIMQELREKG FIANYENKRRKYVITDIGYKVIELMSKIR >gi|292606589|gb|ADGG01000021.1| GENE 45 37959 - 38306 506 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782074|ref|ZP_06747400.1| ## NR: gi|294782074|ref|ZP_06747400.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 115 1 115 115 145 100.0 8e-34 MSRNKEIKFAKWWEENILDEYREIKENYFLDDNWFNSLPKELRELILKIDDSSWEDNNYE HYLEELESEIKSYLRKYKHWNYNDEEIQYLFEFSDFCQAEEDDESETDIVKEKEY >gi|292606589|gb|ADGG01000021.1| GENE 46 38321 - 39715 1319 464 aa, chain + ## HITS:1 COG:no KEGG:jhp0940 NR:ns ## KEGG: jhp0940 # Name: not_defined # Def: hypothetical protein # Organism: H.pylori_J99 # Pathway: not_defined # 16 293 4 258 325 135 34.0 3e-30 MKLSKKSIQKAKIELIDFSNCEFSTKSYEESSMKKNAIIFKDEKYLLKYMEKNKARHYQD IKNQKETYFNSVYSEYISCHIGKMIGLDIQDTIIGFEKENNKLKGIQYIPCVACKDFCKS GENIVNFERIFEIVNRKENKRYNDENFNDVLKVIEKQEFIDKNKLKENFLDMFVFDSFIG NFDRNLKNFGIIENEKDKTYRIAPIFDCASSLHPKANRKRIKFLANSYKKNSQVVYEYPL SPNSYFKDDDGTKINYFDFLVNNSFNYNSDIAKSIVKIVPKLIELNNNGGIYDILDKLDG MIIPERIEVITKELNFKVDEMFIPTLEISKELLNKEIDKFMLKDYSRFNEYNKEEKREFL SEIKNILEMQKLLIKNNSNNFDTKDLYQRVDEFLESKNTKDMKAVFSYLEKNNFPIDYID HFEEKFRLEIEKIAENKEKSNNLKEINEDEEIEKKKEFDITDNL >gi|292606589|gb|ADGG01000021.1| GENE 47 39896 - 40726 1057 276 aa, chain + ## HITS:1 COG:FN0247 KEGG:ns NR:ns ## COG: FN0247 COG2849 # Protein_GI_number: 19703592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 276 1 263 263 275 58.0 5e-74 MKKVLSVLLLIFTMLLSACGGVKYEYKDGVMYENKKPATGTFEFKSGDYKVKSQFVDGVP EGVLEKYYLDGNLMIKDVFGSEGIIQEEIYYKNGNLMGFSDAEGVKMYYDDGQLLMSTTY STGETILYHENGNPMMEVLNDDIAIYNEDNERLFKAESGAMVDLGLTMKKLEDGSFEVLK GDKLVSTIDANGEITNYLYSSGEKMLTLSDVDALTEFFLKDGTTLMKQYADGKILINYKS GKPLYEVEENNWYIYDEDGNKITSENETVTDIKKIN >gi|292606589|gb|ADGG01000021.1| GENE 48 40767 - 41531 1322 254 aa, chain - ## HITS:1 COG:FN1297 KEGG:ns NR:ns ## COG: FN1297 COG0024 # Protein_GI_number: 19704632 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Fusobacterium nucleatum # 1 254 1 254 254 450 87.0 1e-126 MRLIKTLDEIKGIRKANQIIAKIYTDIIPPYLKPGITTREIDRIIDEYIRSCGARPACIG VEGIYGPFPAATCISVNEEVVHGVPGDRVIKEGDIVSLDTVTELDGYYGDSARTFAIGII DDESRKLLEVTEKAREIGIQTAIAGNRLGDVGHAIQTFVEQNDFSVVRDFAGHGVGLALH EEPMIPNYGRKGRGLKIENGMVLAIEPMVNAGTYKIAMLPDGWTIITRDGKRSAHFEHSI AIIDGKPVILSELD >gi|292606589|gb|ADGG01000021.1| GENE 49 41567 - 42202 966 211 aa, chain - ## HITS:1 COG:FN1298 KEGG:ns NR:ns ## COG: FN1298 COG0563 # Protein_GI_number: 19704633 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Fusobacterium nucleatum # 1 211 1 211 211 366 92.0 1e-101 MVDVNLVLFGAPGAGKGTQAKFIVDKYGIPQISTGDILRVAVANQTKLGLEAKKFMDAGQ LVPDEVVNGLVEERLAEKDCEKGFIMDGFPRTVVQAKALDEILTRLGKQIEKVIALNVPD ADIIERITGRRTSKATGKIYHIKFNPPVDEKEEDLVQRADDTEEVVVKRLETYHNQTAPV LDYYKAQNKVTEIDGTKKLEDITEDIYKILG >gi|292606589|gb|ADGG01000021.1| GENE 50 42261 - 43193 1087 310 aa, chain - ## HITS:1 COG:FN1299 KEGG:ns NR:ns ## COG: FN1299 COG0451 # Protein_GI_number: 19704634 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Fusobacterium nucleatum # 1 310 1 309 309 438 76.0 1e-123 MKKILVMGGNQFVGKEVAKKFLEKNYKVYVLNRGIRKNLDNAIFLKADRKNISEMKNILK NIEVDVIIDISAYTEEQVEILQRVMKNKFKQYILISSASIYTDITESPAKEEDPTGENPA WGDYAKNKYLAEIKTIENSRLYNFKYTIFRPFYIYGIGNNLDRENYFFSRIKYNLPIYIP NKGNNIVQFGYIEDLASAIELAVENSDFYGQVFNISGDEYVAITEFAEICGKIMNKKSII KHIDTEEKNIKARDWFPFREVNLFGDISKLENTGFRNKYSLIKGLEKTYKYNEEHDLIIE PNLNEIEKEN >gi|292606589|gb|ADGG01000021.1| GENE 51 43281 - 43433 86 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLLNSKLKTLNEKKAIIEAKKTELIAKHSELKTLKKVAEEKIIKSKLVF >gi|292606589|gb|ADGG01000021.1| GENE 52 43640 - 45262 2455 540 aa, chain + ## HITS:1 COG:FN1301 KEGG:ns NR:ns ## COG: FN1301 COG0488 # Protein_GI_number: 19704636 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Fusobacterium nucleatum # 1 539 1 539 539 1035 98.0 0 MIATASLGMRFSGRKLFEDVNLKFTPGNCYGVIGANGAGKSTFVKILSGELEATEGEVIF DKNKRMSVLKQDHFQYEEEEVLNVVLMGNKKLWDIMVEKNAIYAKTDFTDEDGIRAAELE GEFAELNGWEAETEAETLLMGLKIGADLHHKLMKELTEPEKVKVLLAQALFGEPDVLLLD EPTNGLDVKAISWLENFIMGLENSTVIVVSHDRHFLNKVCTHITDIDYGKIKMYVGNYDF WYESNELMKTLINNKNKKLEQKRQELQEFIARFSANASKSKQATSRKKQLEKLQLEDMQM SNRKYPFVEFKPEREAGNNLLKVENLSKTIEGVKVLDNVSFTIETGDKVVFLAKNDLVKT TLLSILAGEIEPDSGSYTWGVTTSQAYMPRDNSAYFNNTDVNLIEWLRPYSPDEHEAFIR GFLGRMLFSGDETLKKVSVLSGGEKVRCMLSKLMLSGANVLLFDNPSDHLDLESITSLNK ALIKFKGTILFGAHDHEFIQTVANRIIEITPKGIVDKVTTYDEYLEDETIQARLEEMYAE >gi|292606589|gb|ADGG01000021.1| GENE 53 45353 - 45778 601 141 aa, chain - ## HITS:1 COG:FN1093 KEGG:ns NR:ns ## COG: FN1093 COG1959 # Protein_GI_number: 19704428 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 141 1 142 142 223 90.0 6e-59 MKLKNEIEYVFRILNYLSLQDKDRIVTSTEIAENENIPHLFSIRVLKKMEKKGLLKIFKG ANGGYKLNKDPKDITLRDAVETIEEEIIIKDRSCVVGQTSCSVIFKALEEVENNFLNNLD KVNFKELTCPHVDLKIDDEIK >gi|292606589|gb|ADGG01000021.1| GENE 54 45802 - 46713 970 303 aa, chain - ## HITS:1 COG:FN1092 KEGG:ns NR:ns ## COG: FN1092 COG3872 # Protein_GI_number: 19704427 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Fusobacterium nucleatum # 3 303 4 304 304 543 93.0 1e-154 MSNNNRPSIGGQAVIEGVMMRGTECLATAVRKPSGEIVYKKTKIIGKNSNFAKKPFIRGV LMLFESLVIGVKELTFSANQAGEEDEKLSHKEAVFTTLFSLALGIGIFIVLPSLVGSFAF PENKMYANLTEAILRLIIFIGYIWGISFSKEVGRVFEYHGAEHKSIYTYENGLELTPENA KKFTTLHPRCGTSFLFIVMFIAIIVFSVIDYALPIPTNLFSKFLLKVVVRIVLMPVIASL SYELQKYSSCHLNNPLIKLISLPGLALQKITTREPDLDELEVAIVAIKASLGQEVNNATE VFE >gi|292606589|gb|ADGG01000021.1| GENE 55 46728 - 48284 1352 518 aa, chain - ## HITS:1 COG:FN1091 KEGG:ns NR:ns ## COG: FN1091 COG2208 # Protein_GI_number: 19704426 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Fusobacterium nucleatum # 71 517 1 447 447 706 87.0 0 MYLVYFSEVYMIIAFYMIVAFLIFMFFTYIYIKKLVNHYINEELKIVSGLNNKERLNDLP DNIKTEYNQTLEKIIKQENELNNSIDELKVYRNELDVTYSTLVSKSSQLEYTNSLLEKRV RNLSNLNHISRVALSMFNIDKIVETLADAYFVLTATSRISIYLWEGENLVNKKIKGSIDY TESMSFPMNLLTKFTNEDFSKIYSDLSRKITILNDEKVIITPLKVKERQLGVIFLVQNKD QLLEINNEMVSALGIQASIAIDNAISYAELLEKERISQELELASSIQKQILPKGFEKIKG MDIATYFSPAKEIGGDYYDLALKDNILSITIADVSGKGVPASFLMALSRSMLKTINYVSN FKPAEELNLFNKIVYPDITEDMFITVMNTELDLNSSVFTYSSAGHNPLVVYRKESDTVEL YGTKGVAVGFIENYSYKESSFELKNGDIVVFYTDGIVECENKKRELFGTERLLDVVYKNK NLSSKEIKGKILEAIEDFRKDYEQNDDITFVILKSVKK >gi|292606589|gb|ADGG01000021.1| GENE 56 48320 - 50041 1812 573 aa, chain - ## HITS:1 COG:FN1090 KEGG:ns NR:ns ## COG: FN1090 COG0322 # Protein_GI_number: 19704425 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Fusobacterium nucleatum # 1 573 17 589 589 944 90.0 0 MKKNNKVIYVGKAKNLKNRVSSYFNRVHESEKTNELVKNIEDIEFFLTNTEIDALLLENN LIKKYSPKYNILLKDEKTYPFIKISKEDFPSIKIVRTTKALDIKTGEYFGPYPYGAWRLK AVLMKLFKIRDCNRDMKKKSQRPCLKYYMKSCTGPCVYKDIKEDYNKNIESLKQVLRGNS SKLISDLSLLMNKSAEEMDFEKSIIYREQIKELKNIANSQIIQYERELDEDIFVFKTILD KTFICVLNMRDGKILGKTSTSLDLKNKITDNVFEAIFMSYYSKHILPKSLVLDAEYENEL AIVVEALTLEVSKKKEFHFPKIKSRRKDLLEMAYKNLERDIESYFSKKDTIEKGIKDLHD ILNLKRFPRKIECFDISNIQGKDAVASMSVSIEGRAAKKEYRKFKIRCKDTPDDFSMMRE VIERRYSKLADIDFPDVILIDGGLGQINAAAEILKKLGKLHLSELLSLAERNEEIYKYGE PEPYVLSKDMEALKIFQRVRDEAHRFGVTYHRKLRSKRIISSELDRIEGIGEVRRKKLLT KFGSVTAIKKASIEELKEIVPEKVALEIKNHIK >gi|292606589|gb|ADGG01000021.1| GENE 57 50076 - 50948 906 290 aa, chain - ## HITS:1 COG:FN1089 KEGG:ns NR:ns ## COG: FN1089 COG1660 # Protein_GI_number: 19704424 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Fusobacterium nucleatum # 1 290 1 290 290 496 89.0 1e-140 MKTKHIIIVTGLSGAGKTTALNILEDMNYYTIDNLPLGLEKSLLDTEIEKLAVGIDIRTF KNTKDFFKFINYIKKTGVKMDIIFIEAHEAIILGRYTLSRRAHPLKENTLLKSILKEKEV LFPIREIADLIIDTTEIKNVELEKRFKKFLSGKDELNIDINMNIHIQSFGYKYGIPTDSD LMFDVRFIPNPYYIEKLRDMNGYDEEVKDYVLSQKESTDFYSKLLPLIEFLIPQYIKEGK KHLTISIGCSGGQHRSVTFVNKLAEDLKNSKILSHINIYASHREKELGHW >gi|292606589|gb|ADGG01000021.1| GENE 58 50963 - 52312 199 449 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 103 399 127 407 458 81 26 5e-14 MNKKIIIIGGVAAGMSAASKAKRIDKSLDITVYEMTDAISWGACGLPYYVGDFYPNASLM VARTYEEFEKEGINVKIKHKVENIDFKNKKVFVRNLNENKVFEDSYDELVIATGASSTSP KDIKNLDAEGVYHLKTFNEGLEVKKEMMKKENENIIIIGAGYIGIEIAEAALKLGKNVRI FQHSARILNKTFDKEITDLLENHIREHKNISLHLNESPIEVRTFENKVIGLKTDKKEYTA NLIIVATGVKPNTEFLKDSGLELFKNGAIIIDRFGETNIPNVYAAGDCATVYHSVLEKNV YIALATTANKLGRLIGENLTGANKEFIGTLGSAGIKVLEFEAARTGITEQEAKDNNINYK TVFVGGEDHAAYYPGGEDVYIKLIYHADTKILLGAQVAGKRGAALRADSLAVAIQNKMTT QELANMDFLYAPPFATTWDIMNVAGNVAK >gi|292606589|gb|ADGG01000021.1| GENE 59 52489 - 53145 704 218 aa, chain + ## HITS:1 COG:FN1162 KEGG:ns NR:ns ## COG: FN1162 COG0491 # Protein_GI_number: 19704497 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Fusobacterium nucleatum # 1 202 1 202 207 332 82.0 3e-91 MKVKCFHLGAYGTNCFLAYDDNNLAYFFDCGGRNLDKLYSYIEEHNLDLKYIVLTHGHGD HIEGLNDLVDKYPEAKVYVGEEEKDFLYNSELSLSYNIFGDSFKFKGEVQTVKEGDMIGD FKVIDTPGHTIGSKCFYDEKSKILISGDTLFRRSYGRPDLPTGNSEMLCDSLKKLSKLPG ETVVYSGHTEETTIGEEENTIENAIKEMGLLLKIKEMV >gi|292606589|gb|ADGG01000021.1| GENE 60 53146 - 54069 385 307 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 4 294 1 296 306 152 34 1e-35 MEKIYDVVIVGAGPAGLTAGIYTGRGSLSTLILEKEGIGSMIMTHQVDNYPGLHVGASGK EIYDTMKKQALEFGCEIKPATVLGFDPYDEVKIVKTDAGNFKTKYIIIATGLGKIGAKKV KGENKFLGAGVSYCATCDGAFTKGRIVSLVGKGDELIEESLFLTRYAKEVNVFLTSDDLD CSEELKEAILSKENVKIVKKVKLLEIKGEEFVTELDLEVDGNKETVATDFVFLYLGTKNN LELYGEFVSLSDAGYIITDETMKTRTDKMYAIGDIREKDIRQIATATNDGVIAASFIMKE ILKAKKK >gi|292606589|gb|ADGG01000021.1| GENE 61 54158 - 54718 711 186 aa, chain + ## HITS:1 COG:XF1739 KEGG:ns NR:ns ## COG: XF1739 COG2220 # Protein_GI_number: 15838340 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Xylella fastidiosa 9a5c # 1 182 27 205 385 200 51.0 1e-51 MKTPAFGALPSGKSLEKVKNSKNYIDGEFRNKEKTELLTDTKKTPIKRLLEFAFEKDPEG TVPKIALPSVKTDLKTLDPNEDLIVWFGHSSLFIQIAGKKILVDPVFSKYASPVPFSNKA FEGTNIYTVDDLPEIDVLLITHDHYDHLDYPTVKKLKDKVAKVIVPLGVDAHLLRWGFDE EKNNYS >gi|292606589|gb|ADGG01000021.1| GENE 62 54693 - 55223 436 176 aa, chain + ## HITS:1 COG:RSp1122 KEGG:ns NR:ns ## COG: RSp1122 COG2220 # Protein_GI_number: 17549343 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Ralstonia solanacearum # 4 171 178 340 362 127 36.0 1e-29 MKKKITTVDWDDEVTIDENLKIYALESRHFSGREFFNINQSLWVSYLIEEKYNNGLYRLF LSGDGGYSSRFKAFKEKFKNIDLAVMEAGQYNEEWSLIHSLPEDIIKEVQDMKATKLFPI HNSKFKLSKHLWYEPLEKLDSFTANTNIQLLTPMIGEKLFLHKENSFKKWWENLEK >gi|292606589|gb|ADGG01000021.1| GENE 63 55240 - 56187 464 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 5 315 6 318 319 183 34 8e-45 MKHYIGIDLGGTNTKIGVVDLEGNLIISKIIKTHSKQKVDKTLERIWETSKDLLAKCDIP IFSVLGIGIGIPGPVKEQSIVGFFANFDWEKNMNLKEKMEKLTGIETRIENDANIIAQGE AIFGAAKGKKSSITIAIGTGIGGGIYLNGNLLTGMSGVAGEIGHMKVIKDGKTCGCGQNG CFEAYASASALVKEAKERLKLNEDNLLYKEINGNLEELEAKNIFDAARKGDEFSKDLLEY ESDYLALGIGNLLNIFNPECIVISGGISLAGDEILIPVKEKLKKYTLLPALENLEIKTGV LGNEAGVKGAVALFI >gi|292606589|gb|ADGG01000021.1| GENE 64 56180 - 56368 66 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFNKIMISLFIYMLSIYKHNIYSSLSFVNTFLLKINIFSFLRQYCVFIKHKPKGTQLKC FK >gi|292606589|gb|ADGG01000021.1| GENE 65 56393 - 57421 1609 342 aa, chain + ## HITS:1 COG:FN1165 KEGG:ns NR:ns ## COG: FN1165 COG1879 # Protein_GI_number: 19704500 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 342 1 341 341 576 95.0 1e-164 MKKFGMILGSIILASALVACGEKKEEAKTEAAPAAEKLSIGLTAYKFDDNFIALFRKAFE AEAAAKADTIEVTAIDSQNSVATEKEQIEAVLEKGVKAFAINLVDASAADGIINLLKEKG VPVVFYNRKPSDEAIASYDKLYYVGIDPNAQGIAQGELIEKLWKENPDLDLNKDGVIQYV MLTGEPGHPDAVARTKYSISTLNDHGIKTEELHQDTAMWDTATAKDKMDAWLSGPNGSKI EVVICNNDGMALGAIESMKATGKVLPTFGVDALPEALVKIEAGEMAGTVLNDAKGQASAT FNMVANLAAGKEPTEGTELKLDNKIILIPSIGIDKSNVADFK >gi|292606589|gb|ADGG01000021.1| GENE 66 57509 - 59011 192 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 273 478 17 217 245 78 26 3e-13 MENLKYVLEMENITKEFPGVKALDNVQLKLKPGTVHALMGENGAGKSTLMKCLFGIYEKD TGKILLDGVEVNFKSTKEALENGVSMVHQELNQVLQRNVLDNIWLGRYPMKGFFVDEKKM YEDTINIFKDLDIKVDPRKKVADLPIAERQMIEIAKAVSYKSKVIVMDEPTSSLTEKEVD HLFRIINRLKESGVAIVYISHKMEEIKMISDEITILRDGKWISTNDVSKISTEQIISMMV GRDLTERFPKKDNTVKEMILEVKNLTALNQPSIQDVSFELYKGEILGIAGLVGSKRTEIV ETIFGMRPKEKGEIILNGKTVKNKNPEDAIKNGFALVTEERRSTGIFSMLDIAFNSVISN LDRYKNKFRLLKNKDMEKDTKWIVDSMRVKTPSYTTKIGSLSGGNQQKVIIGRWLLTEPE VLMLDEPTRGIDVLAKFEIYQLMIDLAKKDKGIIMISSEMPELLGVTDRILVMSNGRVAG IVKTSETNQEEIMELSAKYL >gi|292606589|gb|ADGG01000021.1| GENE 67 59029 - 60048 1498 339 aa, chain + ## HITS:1 COG:FN1167 KEGG:ns NR:ns ## COG: FN1167 COG4211 # Protein_GI_number: 19704502 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Fusobacterium nucleatum # 1 339 1 339 339 540 96.0 1e-153 MFARNNEGKIDYKKIIIESGLYLVLFCMLIAIIIKEPTFLSLRNFKNILTQSSVRTIIAL GVAGLIVTQGTDLSAGRQVGLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTVLIVVLVGI IIASINGIVVATLNVHPFIATMGTMTIVYGINSLYYDKAGAAPISGFVDKYSKFAQGYIQ IGSYTIPYLIIYAAIATLIMWILWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLIGIYAL SGAYYAFGGFLEAGRIGSATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILT IINYGLTYTGVSPYWQYIIKGIIIVTAVAFDSIKYAKKK >gi|292606589|gb|ADGG01000021.1| GENE 68 60241 - 60561 292 106 aa, chain + ## HITS:1 COG:no KEGG:FN0337 NR:ns ## KEGG: FN0337 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 106 7 112 112 128 78.0 5e-29 MKRFQNATMEYNLAKNDLVIRDVNNNAIFFAVEFFENSKQIKRVFSLYPVSVEIEKNKVL ELKFSVQNQIGEQSVLNLLLELDQLVSDKRTVINISNEDLSNITLN >gi|292606589|gb|ADGG01000021.1| GENE 69 60723 - 61922 1603 399 aa, chain + ## HITS:1 COG:no KEGG:FN0336 NR:ns ## KEGG: FN0336 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 160 399 1 240 240 447 91.0 1e-124 MKKKILLFVLMIATSLNINAAQATSFAETVNNDKIEVIATYDNEMPQEIKNIYNPKHNGE GVSYLDYVFVTARSANLREKPDPKAKVIGKFTYDVKLKLLEKVRYQGNIWYLVEDAKGNR GYIAGSQTKKRDFRFQMALDKIGDLEYFINKSIEEGSTLMSVNTYAPNPSNINPQREKDK YGTSLDQNLLGISKKGERIIIPDRSVVKIIEDRGDKALIRALSVPEEVEVSKAKLSTYPS IKKGFRKIIAIDIENQNFMVFEKSRQTNEWELISYVYTKTGIDSQLGYETPKGFFTVPVV KYVMPYTDETGQKQGSAKFAIRFCGGGYLHGTPINVQEEVNKEFFLRQKEFTLGTTTGTR KCVRTSEGHAKFLFDWLINSPNKDSNEQRLSEDAYFIVF >gi|292606589|gb|ADGG01000021.1| GENE 70 61954 - 62505 688 183 aa, chain + ## HITS:1 COG:FN0335 KEGG:ns NR:ns ## COG: FN0335 COG2885 # Protein_GI_number: 19703678 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Fusobacterium nucleatum # 11 183 1 172 172 297 91.0 6e-81 MKKKIFAVLMLALLVTACSSSKKVIKNTGVGVDSANKYAIEDTEANKKPLEDIIVFDQEG VTIRREGNNLILSMPELILFDFDKYVVKDGIKPSLATLAKALGENKDIHIKIDGYTDFIG TEAYNLDLSVKRARAIKEFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFII SRG >gi|292606589|gb|ADGG01000021.1| GENE 71 62600 - 63847 1514 415 aa, chain + ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 1 415 1 414 415 693 86.0 0 MLAKRYTGKKLVDNIFTTSKKAKQAIKKYGKENVINATIGSLYDEEEKFAIYNVVEKVYR NLPSEDLYAYSTNVIGEDDYLDEVIKALFFDDYKEELKDLLYIASVATTGGTGAISNTIK NYMDTGDKVLLPNWMWGTYKNIVIENGGKIETYQLFDENGNFNFEDFRSKVLELAKTQKN VVLILNEPSHNPTGFRMTYEEWVNLMDFFKSIKDTNLIVIRDVAYFEYDDRTEEETKSLR KLLVGLPKNVLFMYAFSLSKSLSIYGMRIGAQIAVSSSEEVIQEFKDAISFSCRTTWSNV PKGGMKLFETIMKNPELKAEFLKEKQAYIELLKERADIFLNEAKEVNLDILPYKSGFFVT IPIGETIDKVIEDLESQNIFVIKFDKGIRIGICSVPKRKIVGLAKKIKETIEKSK >gi|292606589|gb|ADGG01000021.1| GENE 72 63859 - 64419 774 186 aa, chain + ## HITS:1 COG:FN0333 KEGG:ns NR:ns ## COG: FN0333 COG1954 # Protein_GI_number: 19703676 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Fusobacterium nucleatum # 1 186 1 186 186 265 81.0 3e-71 MKLKTILERNPIIPAIKDKITLEKALDSNSEIVFIILANIVNIKEYCDKLKEKKKIIYIH IDMIDGLNSTNNGIDYIMNTIKPDGILTTKSNVVAHAHKNNISVIQRFFVLDTLSYEKAL INIKENKIAAAEIMPGLMPKIIKKLSQKTHIPIITGGLIKEKEDVINAIKAGALSVSTTE TSLWEE >gi|292606589|gb|ADGG01000021.1| GENE 73 64466 - 65491 1098 341 aa, chain + ## HITS:1 COG:FN0332 KEGG:ns NR:ns ## COG: FN0332 COG0598 # Protein_GI_number: 19703675 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Fusobacterium nucleatum # 1 341 11 351 351 538 86.0 1e-153 MPGSVVYTGENPNYNITITVIYYSKDFHKRETFSSTDKIDIDLKFKGNIWINIDGINDVN LIKDIGKMFDIDTLSLEDIANPEQRVKIDDRDTYILIILKMLQMEILTKDVQYEQLSLVI KKNILITFQETPYDPFEIIRTRLEIAGARLRSQDVSYLAYILIDIIVDNYLLILDEVENE IDEIESQLIESADKDDLENILALKQNIAVLKKFISPVRELISKLQTRSMLNYFHEDMKYY LGDLNDHGIIVFDTVDMLNNRATELIQLYHSMISNTMNEIMKILAIISTIFMPLSFIVGL YGMNFDNMPELRWHYGYYITLGLMASLVGLMIFYFKKKKWF >gi|292606589|gb|ADGG01000021.1| GENE 74 65631 - 67127 2103 498 aa, chain + ## HITS:1 COG:BS_yuaG KEGG:ns NR:ns ## COG: BS_yuaG COG2268 # Protein_GI_number: 16080153 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 37 494 53 501 509 182 34.0 1e-45 MFSNIIVTAAIVVGVVILLSFFSYVRVPVNKMAFISGVGKNRVARGKLVIYLRFFERVDY LDLSVFSVDVNTAVAVPTNDFINIKVDAVVNLQVDETVGILEIAAKNFLNRKSSDIATSV KDVLEGNLREIVGQMQLKEIVQNRKNFNEKVQENVAPDLREMGLKVISFNVQNFQEDKQV IENLGAENISKISKEASIARAEADKEIEIAKANANKEAMDIKLKTEQEIAEKENALAIKK AELKVKADTEKAKADVTYELEKERKRKEIEEVSGQSNLVREQKAIETNKAKYEAETIVPK QADAEARKVEKTKEAEAKKIEEQQYAEAKLYKEQREAEAIKLRALAEAEAIREKALAEAE ATRQKGLAEAESKKALLLAEAEGLREKGLAEAEALDKKAEAMAKYGDAAKLEMYYNALPL VAKNLSEPLSKISNITMYGEGNTTKFMSEMTQNLDKVLKAASDGLGIDAKTLLTSYLGGK IAQPKNEAPKESKDVGCK >gi|292606589|gb|ADGG01000021.1| GENE 75 67187 - 67909 960 240 aa, chain + ## HITS:1 COG:FN1891 KEGG:ns NR:ns ## COG: FN1891 COG0584 # Protein_GI_number: 19705196 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Fusobacterium nucleatum # 1 239 22 260 261 390 83.0 1e-108 MKIFAHKGASGYAPENTLIAIKKAIEMKVDGIEIDIQLTRDGRIVLMHDWKVDRTTTGRG YVYELDFDYIRTLDAGQWFTKDFIGEVVPTLEEVLDILPQDMMLNIEIKDTARHHSKIEE KLLEVLKKYPDKFENIVVSSFHHDKIKKLQELEPKLKLALLTNSEFIEIEKYLSTNGVSS YSYHPEINHVSKEDIEKLHAKGVKILVWTVNKEEDLNYLVKLGVDGVISDYPDLMKELIS >gi|292606589|gb|ADGG01000021.1| GENE 76 68063 - 69244 616 393 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 1 392 1 394 396 241 35 2e-62 MSKIIVKKDKEQKILNFYPNIYKDEIKDIIGNVKTGDIVDIITSDMKFLARAYVTEGTSA FARVLTTKDEKIDKKFIFERIKNAYEKRKHLLEETNSFRAFYSEADYIPGLIIDKFDKYV SIQFRNSGVEVFRQDVIEAVKKYLKPKGIYERSDVENRVIEGVETKTGIIFGEIPERTIM LDNGVKYSIDIVDGQKTGFFLDQRDSRKFIAKYINNQTKYLDVFSSSGGFSMAALKNGAK EVVAMDKDSHALELCYENYKLNEFTADFSTVEGDAFLMLNTLATRNKKFDIITLDPPSLI KKKTDIYKGRDFFLDLCDKSFKLLENGGILGVITCAYHISLQDLIEVTRMAASKNNKLLS VIGVNYQPEDHPWILHIPETLYLKALWVKVEER >gi|292606589|gb|ADGG01000021.1| GENE 77 69260 - 69799 519 179 aa, chain + ## HITS:1 COG:no KEGG:FN1032 NR:ns ## KEGG: FN1032 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 179 1 179 179 233 89.0 3e-60 MYLDILILIIFIFGIFSGIRNGIFIEIISVFGFAINLLITKMYTPVVLKFLKRSDATFAN NYVITYIVTFITVYLVVSMILVFVKKAFKGLKKGFFNKLMGGIAGFVKSLIVSLVIILIY TYSSKLAPSLEKYSQGSSAIGIFYEIIPNFESYIPDILVEDFNKNATKKIIEKNINTML >gi|292606589|gb|ADGG01000021.1| GENE 78 69808 - 70887 886 359 aa, chain + ## HITS:1 COG:FN1031 KEGG:ns NR:ns ## COG: FN1031 COG0795 # Protein_GI_number: 19704366 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 359 1 359 359 564 89.0 1e-160 MKIINKYILDELKGPIILAVFVFTFIFLLDIVVTMMEHIIVKGISVFDVLRLLSFYIPPI LTQTIPIGMFLGIMICFTKFSRNSESVAMVSTGMSIRAILKPILAIAIGSAIFILFLQES IIPRSFVKLKYVGTKIAYENPVFQLKEKTFIDNLDQYSIYVDKVESDGKAKNIIAFEKPE DKTKFPMVLTGEEAFWKDNSIILKQSQFISFDETGKKNLTGTFDEKRVVLTPYFENLNLK IKDVEALSITDLVKNIRKVEAEEVLKYKIEIFRKLALIFSTIPLAVIGFCLSLGHHRISK KYSFVLAMIIIFAYIIFLNIGIVMASAGKLHPFIATWTPNVLLYFLGYKLYRAKEVKGI >gi|292606589|gb|ADGG01000021.1| GENE 79 70887 - 71978 1148 363 aa, chain + ## HITS:1 COG:FN1030 KEGG:ns NR:ns ## COG: FN1030 COG0795 # Protein_GI_number: 19704365 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 363 1 363 363 583 86.0 1e-166 MIKKLDIYISKYFIKYFLMNIIGFMGVFLLAQTFKIIKYINQGKLEGGEIFDYIVNLLPK MFVETAPLSVLLAGLITISIMASNLEIVSLKTSGIRFLRIVRAPLIIAFIISLFVFFVNN SIYTKSLAKINFYRKGEIDASLRLPKTKENAFFINNTDGYIYLMGNINRETGEAEKIEIV IYDTEISKPVEIITAQSGKYDKDNKKWLLSGVNIYNVETKKTITKVAYDSDRFGEDPNNF IRAAAEDPRMLTIKELKKTIKEQKNIGEDTRIYLAELAKRYSFPFASFIVAFIGLSVSSK YVRGGRTTLNLVICVVAGYGYYLVSGAFEAMSLNGILNPFISSWIPNILYFIIGMYFMNR AEY >gi|292606589|gb|ADGG01000021.1| GENE 80 71997 - 73223 1501 408 aa, chain + ## HITS:1 COG:FN1029 KEGG:ns NR:ns ## COG: FN1029 COG0612 # Protein_GI_number: 19704364 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Fusobacterium nucleatum # 1 408 1 408 408 653 91.0 0 MENIKLKKLDNGITLITEHLPNVSTFSMGFFIKTGAINETKKESGISHFIEHLMFKGTKN RTAKEISEFVDFEGGILNAFTSREVTCYYIKLLSSKMDVALDVLTDMLLNSNFDEESIEK ERNVIIEEIRMYEDIPEEIVHEKNIEFALKGIHSNSISGTIASLKKINRKAILKYLEEHY VAENLVVVACGNIDEKYLYKELNKRMKDFRKAKKEEVLDLTYQIKKGKKVIKKPSNQIHL CFTTRGVSNKSELRYPAAIISNILGEGMSSRLFQKIREERGLAYSVYTYLTRFTNCGLLS VYVGTTKEDYKEVIKLIKEEFKNIKENGISERELRKAKNKYESAFTFSLESTSSRMNRLA STYLTYGEIISLDKVREDIEKVSLKDIKKAAEFLFDEEYYSQTIVGDI >gi|292606589|gb|ADGG01000021.1| GENE 81 73224 - 73664 838 146 aa, chain + ## HITS:1 COG:FN1028 KEGG:ns NR:ns ## COG: FN1028 COG0756 # Protein_GI_number: 19704363 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Fusobacterium nucleatum # 1 146 1 146 146 248 92.0 3e-66 MKKIQVKVVREEGVQLPKYETEGSAGMDVRANIKEAITLKSLERVMIPTGLKVAIPEGYE IQVRPRSGLAIKHGITMLNTPGTVDSDYRGELKVIVVNLSNEAYTIEPNERIGQFVLNKV EQIEFVEVEELDDTSRGEGGFGHTGK >gi|292606589|gb|ADGG01000021.1| GENE 82 73684 - 74784 1035 366 aa, chain + ## HITS:1 COG:FN1027 KEGG:ns NR:ns ## COG: FN1027 COG0772 # Protein_GI_number: 19704362 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 1 366 1 366 366 562 89.0 1e-160 MQNSTYLKKISKFSVFFIANIILLFVISLSTIYSATITKSEPFFIKEIIWFVLGLIVFVI VSLIDYRKYYKYSMAIYIFNIIMLLSVLVIGTSRLGAKRWIDLGPLALQPSEFSKLLLIF TFSAYLINNYSDKYTGFKAMFMCFLHIFPVFFLIAIEPDLGTSLVIILIYGMLLFLNKLE WKCIITVFASIAGLIPIAYKFLLKEYQKDRIDTFLNPESDALGTGWNITQSKIAIGSGKI FGKGFLNNTQGKLKYLPESHTDFIGSVFLEERGFIGGSMLLLIYIVLLAQILYIADTTQD KFGKYICYGVATIFFFHIFVNMGMIMGIMPVTGLPLLLMSYGGSSLVFSFLILGVVQSVK IHRGNK >gi|292606589|gb|ADGG01000021.1| GENE 83 74784 - 75674 192 296 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 91 295 83 277 285 78 29 3e-13 MMEFIIDEEYETVRIDRFLRKHLKNIALSEIYKMLRKAKIKVNNKKVSQDYRLILGDIIF VFLPENFKEKNEDETFIELNEIRKEKLKSMITYENENLFIINKNLGDVIHKGSGHDISLL EEFRAYYSNNKVNFVNRIDKLTSGLVIGAKNIKTAREIAKEIQLGNITKKYYILVYGKIE KEEFILENYLKKDEEKVIVSDIEKEDYKKSITHYKRINGNDDYTLLEAELKTGRTHQLRA QLNHIGHTIVGDTKYGKNIKEETMYLFSYYLKIDLYDLELEMGIPDFFFKKYNIQK >gi|292606589|gb|ADGG01000021.1| GENE 84 75756 - 77048 1586 430 aa, chain + ## HITS:1 COG:FN1025 KEGG:ns NR:ns ## COG: FN1025 COG2252 # Protein_GI_number: 19704360 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 1 430 6 435 435 617 86.0 1e-176 MEFLDSYFKISERKSTISHEVMGGITTFLAMAYIIIVNPSVLSLSGMDKGALITVTCLAS FIGTIIAGVWANSPIALAPGMGLNAFFTYTLTLERQVPWQTALGIVFLSGCFFLILSIGG IREKIASSIPVSLRLAVGGGIGLFIAFIGLKGMGIVVANQATFVGIGEFTKTTCVSIIGL LIIIVMEVKKKKGGILIGIIITTILGIVIGDVAIPSKILSLPPSPAPILFKLDIMSAFKL SLIGPIFSFMFVDLFDSLGTLMSCSKEMGLIDDSGEVKNLGRMLYTDAGSTIIGATMGTS TVTAYVESAAGIMLGARTGLAATVTALGFLLSLFFTPLISIVPGYATAPALIVVGIFMFR QVSNLEFGDLKILFPAFITIFTMPLTYSISTGLALGFLSYILVHLLTFDFKKLNITLFFI GAICLLHLLV >gi|292606589|gb|ADGG01000021.1| GENE 85 77194 - 77502 670 102 aa, chain + ## HITS:1 COG:FN1024 KEGG:ns NR:ns ## COG: FN1024 COG0776 # Protein_GI_number: 19704359 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Fusobacterium nucleatum # 1 92 1 92 102 102 85.0 2e-22 MTKKEFVDAFAKKAELKLKDSERLVAAFLETVEEALLKGEGVRFIGFGSWEVKERAAREV TNPQTKKKIKVDAKKVVKFKVGKPLADKVAEQKVAKKSTKKK >gi|292606589|gb|ADGG01000021.1| GENE 86 77697 - 78779 1380 360 aa, chain + ## HITS:1 COG:FN1000 KEGG:ns NR:ns ## COG: FN1000 COG0502 # Protein_GI_number: 19704335 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Fusobacterium nucleatum # 1 360 1 360 360 624 88.0 1e-178 MLKEKNSAGGGKFKFFNLSKEKDNELAESVNVKEFISYLKDKIINEKYEITREEAIFLSR IPNNDMETLNLLFDAADQIREAFCGKYFDLCTIINAKSGKCSENCKYCAQSSHFKTGAET YGLVSKELALCEAQKNETEGAHRFSLVTSGRGLKGNEKELDKLVEIYKYIGENTNKLELC ASHGICTKEALQKLVDAGVLTYHHNLESSRRFYPNVCTSHTYDDRINTIKNAKAVGLDVC SGGIFGLGETIEDRIDMALDLRELEICSVPINVLTPIPGTPFENNEAVEPLEILKTISIY RFIMPETYLRYGGGRIKLGDYVKTGLRCGINSALTGNFLTTTGTTIEKDKKMIEELGYEL >gi|292606589|gb|ADGG01000021.1| GENE 87 78769 - 79428 694 219 aa, chain + ## HITS:1 COG:FN1001 KEGG:ns NR:ns ## COG: FN1001 COG0132 # Protein_GI_number: 19704336 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Fusobacterium nucleatum # 1 219 1 219 219 377 88.0 1e-104 MNFKDFFVIGTDTDVGKTYVSTLLYKALRKHNFQYYKPIQSGCFLRDNKLTAPDVDFLTK FVDIPYDDSMVTYTLKEEVSPHLASEMEGTVIEIENVKKHFEDLKKKYSNIIVEGAGGLY VPLIRDKFYIYDLIKMWNLPVVLVCGTRVGAINHTMLTLNALNTMGIKLEGLVFNNYKGQ FFEDDNIKVILELSKVKNYLIIKNGQKEISDEEIETFFN >gi|292606589|gb|ADGG01000021.1| GENE 88 79441 - 80778 1774 445 aa, chain + ## HITS:1 COG:FN1002 KEGG:ns NR:ns ## COG: FN1002 COG0161 # Protein_GI_number: 19704337 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Fusobacterium nucleatum # 1 443 7 449 452 842 90.0 0 MINNLSELQKKDLKYVFHPCTQMKDFEKNPPLVIKKGEGLYLIDENGNRYMDCISSWWVN LFGHCNERINKVISEQVNTLEHIIFANFAHEPAAELCEELTKVLPKGLNKFLFSDNGSSC IEMALKLSFQYHLQTGNPQKTKFLSLENAYHGETIGALGVGDVDIFTETYRPLIKEGRKV RVPYVNSKLSNEEFTKLEDECIKELEEIIEKNHNELACMIVEPMVQGAAGIKIYSARFLK AVRDLTKKYNIHLIDDEIAMGFGRTGKMFACEHAGIEPDMMCIAKGLSSGYYPIAMLCIT TDIFNAFYADYKEGKSFLHSHTYSGNPLGCRIALEVLRIFKEDNVLNTINEKGKYLKEKM NEIFKGKSYIEDIRNIGLIGAIELKDNLLPDVRVGKEIYNLALKKGVFVRPIGNSVYFMP PYVITYEEIDKMLEICKEAIEELCL >gi|292606589|gb|ADGG01000021.1| GENE 89 80894 - 82549 1933 551 aa, chain + ## HITS:1 COG:FN0873 KEGG:ns NR:ns ## COG: FN0873 COG0616 # Protein_GI_number: 19704208 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Fusobacterium nucleatum # 58 551 1 494 494 797 90.0 0 MVILYALLQAVIISIVIIIAICIFILLVKRKFKNKDIISLKGVKTVVFNIGDLVEDYMVS AVSINKALSHDIVLKALENLVDDKKIEKIIIDVDEIDLSRVHIEEIKEIFKKLSADKEII AIGTTFDEYSYQIALLANKIYMLNTKQSCLYFRGYEYKEPYFKNILATLGVTVNTLHIGD YKVAGESFSHDKMTEEKKESLVNIKETLFQNFINLVKEKRKVDITNEILSGDLIFANSEK AKELGLIDGLSTYEEIGVDYDEDTVDFVEYISAYKRKKNKSKNTIAVINLEGEIDIRESR ESVINYDNVVEKLEVLEDIKNLKGLVLRINSPGGSALESEKIYQKLKKLEIPIYISMGDL CASGGYYIATVGKKLFATSVTLTGSIGVVILYPEFTEIINKLKVNMEGFSKGKGFDIFDV FSKLSEESKEKIIYSMNEVYSEFKEHVMQARNISEEDLEKIAGGRVWLGSQAKENGLVDE LGTLNDCIDSLAKDLELKDFKLVYIRGRQSIAEIVSAMKPQFIESDIVEKMEMLKSYSNK ILYYDESLENL >gi|292606589|gb|ADGG01000021.1| GENE 90 82671 - 84806 2274 711 aa, chain + ## HITS:1 COG:no KEGG:Hsero_0501 NR:ns ## KEGG: Hsero_0501 # Name: not_defined # Def: membrane protein # Organism: H.seropedicae # Pathway: not_defined # 423 700 182 431 435 109 28.0 4e-22 MFGIVFFKVIKYNKLDNKEKRNFYINLLPILGVIGTFLGICLGLANFDSTEIESSVPQLL QGLKTAFWTSFIGSSWAVFLNMRYSSKDKEEADDEEEEISLLKLQINELQKLNNNFYILF EENKKEKETLHQINKEILEGIKANNIMKEQLSQMEELKDIKQELVLMNQKEDNKTELLNK VLDSLNSSETVLGDISSFKEILNSIFEKENDKDEYMNKILDNMDNSKHILENILSFKEIL NLRFEKEASKDEQLKMILEKFEKIEETSNLQVEILKKIEDETFLLDDIHNDLENLNEKAN SQISQLESLEKLNVLDELNNNIDSQLEEISVVNANILTKLDSLNVLEEIKNNINSQLEKI SVINTNMFAKLDNLEKYDSNIFANSSKSIDFISSIYGEIEEYKNRFNSFIDNSTRENSEL VMAFKEFSNYMLEENSKVFIEALNKTIRDFNINLVETFGSNFKQLNEAVSKLLDWQEHYK DTIELTTENQKIIFDSFRNIETELDNFNQKAKGVNTIVSELALSTKEALEQNYRLNDSLE VLAQLDSQVKELLPNFMKINSNLDDNLKTFNEETNKITKELKEFTDNLSSSLDKSKNQVS KLLEDTIKNFSSIIEKSEENNKEIVRSTSEKIKSLNEDLDKHIREKITKIDKILKEKIQE TDDSLKDNLNDIIKMLGNISEKFAEDYEPLANKLREIVQLPNLIENDKKVK >gi|292606589|gb|ADGG01000021.1| GENE 91 84806 - 85504 508 232 aa, chain + ## HITS:1 COG:ECs5257 KEGG:ns NR:ns ## COG: ECs5257 COG2885 # Protein_GI_number: 15834511 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 226 9 234 235 184 43.0 1e-46 MKKKHYEDHFSPRVADLMSALTMIFLFISVTYMLQVNKQKEHIEVIAKDFRNTKQSIYKD LNKEFEEDLKRWNAYIDKDTLSITFKEPDVFFDVGSSEINSNFKLILKDFFPRYIEMLYK NYRDEIEEIRIEGHTSSEWNKDDDDLQAYFKNMSLSQARSKSVLEYCMLLDSMEEYRDFL IEKATANGLSYSHRIIENGKENYNKSRRVEFKIKTTAEAHIDQIIEAGGLNE >gi|292606589|gb|ADGG01000021.1| GENE 92 85497 - 86075 633 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782118|ref|ZP_06747444.1| ## NR: gi|294782118|ref|ZP_06747444.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 192 1 192 192 298 100.0 1e-79 MNKLNFIPLKEVMNKMGIDESIKPNIEMLEKRKIIWRKISDFSGLDVDINKVTCSKEGYI EYEGFSKLIAYIKEQNFSNNIDFNNPNNLKKFHIAYNCKVLNRARENKDNKYQIVLNKKP KFLIDIFVKKNLIEKDVEKELKVCQFCLDALHYKGYDYNKMAYKIREEFVNNFSFEEFLG EEFDKNEKDFKD >gi|292606589|gb|ADGG01000021.1| GENE 93 86084 - 86905 1063 273 aa, chain + ## HITS:1 COG:no KEGG:FN0872 NR:ns ## KEGG: FN0872 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 273 1 257 257 443 86.0 1e-123 MKNRIYKILVVFLLFSLQSFLYAEMKYLNKKGMTVETRYSVPNGYKRVSVEKGSFAEFLR NQKLKPYGEKALYHNGKEKSSRGIYDSVFDVEIGNQDLHQCADAIMLLRAEYFYSKKEYN KINFHFTSGFEAKYSKWIEGYRINVQGKGSYVKKANPSNTYKDFKSYMNMVFAYCGTLSL EKEMKLQSLDKMKIGDAFIKGGSPGHVVLIVDMAENDKGEKIFMLAQSYMPAQQTQILIN PSDRNLGVWYSLKGKDVLITPEWDFSLNQLRTF >gi|292606589|gb|ADGG01000021.1| GENE 94 86918 - 87274 310 118 aa, chain + ## HITS:1 COG:HP1225 KEGG:ns NR:ns ## COG: HP1225 COG0239 # Protein_GI_number: 15645839 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Helicobacter pylori 26695 # 2 118 3 126 130 68 41.0 3e-12 MFKFLYVGLGGALGAILRYSFSFLPIASNKTIFINIIGAIVIGFVSFFSKNIKVLDHRLV LFLTTGLCGGFTTFSTFSLETVQLIEKNEYFLALLYSLGTVSLSLIGIYIGYYLAKLF >gi|292606589|gb|ADGG01000021.1| GENE 95 87338 - 89350 2434 670 aa, chain + ## HITS:1 COG:FN0871_1 KEGG:ns NR:ns ## COG: FN0871_1 COG0337 # Protein_GI_number: 19704206 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Fusobacterium nucleatum # 1 350 1 350 350 594 92.0 1e-169 MKKIFDDIYVGSNIISKLNDYTKDFDKILVFSNETIADLYFEKFKSTLIEKDKIFYFTIK DGEEYKNIESILSVYDFMIENNFSRKSLVISLGGGVICDMGGYISATYMRGIEFIQVPTS LLAQVDASVGGKVAINHPKCKNMIGSFKSPYRVLIDVEFLKTLAEREFKSGMGELLKHSF LTKDKKYLEYIENNVEKIKALDNEVLENIVEQSIRIKKHYVDIDPFEKGERAFLNLGHTY AHALESFFAYKAYTHGEAVAKGIIFDLELSLLRGQIDEAYLERARNIFNLFNIDTDLIYL DSDKFIPLMRKDKKNSFNKIITIILDNEGNLSKTEVKEDEIIKIIAKYENNFLRASIDIG TNSCRLFIAEVKKIENEIIFKKEIHKELEIVKLGEDVNKNKFLKEEAIERTLKCLKKYRE LIDKYSIEEKEIICFATSATRDSSNRDYFIKKAYDEAKIKINCISGNEEAYINFKGVISS FDKNFKENILVFDIGGGSTEFTLGNMNGIEKKISLNIGSVRITEKFFLEDGIYNYSEENR DKAKEWIKENLEKLEEFKNENFILVGVAGTTTTQVSVREKMEVYDSEKIHLSDLTTEEIS DNLDLFIKNIKNDKNIKGLDTKRRDVIIGGTIILKEILEYFKKDSLVVSENDNLMGAILE GVNENDRCSK >gi|292606589|gb|ADGG01000021.1| GENE 96 89331 - 90194 1237 287 aa, chain + ## HITS:1 COG:FN0870 KEGG:ns NR:ns ## COG: FN0870 COG0607 # Protein_GI_number: 19704205 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Fusobacterium nucleatum # 48 287 1 240 240 387 86.0 1e-107 MIDVVNNISGYFDEDFENIIYKDLRTNGLSDEEVEKLLSDKYRDLPMMEENIFKLNNYKL GSIGFTSRELENLKIDFCEEKLLSNDYNGENPTNQIVYLKVLFDKESKKILGCQIANERN IEARLKAVKTIMEKGGDLKELVKYKVNPTDNEWNPDILNLLALTALGKDKEVSTDVEAKD IETLSKNKEFLLDVREEYEYEEGHVKGAVNLPLREILSQKDSLPKDRDIYVYCRSAHRSA DAVNFLKSLGFDKVHNVEGGFIDISFNEYHKDKGNLENSIVTNYNFD >gi|292606589|gb|ADGG01000021.1| GENE 97 90204 - 90998 1112 264 aa, chain + ## HITS:1 COG:FN0869 KEGG:ns NR:ns ## COG: FN0869 COG0561 # Protein_GI_number: 19704204 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 264 7 270 270 435 87.0 1e-122 MKLVVSDLDGTLLNDDSEVSLETIQAIKQLKEKGIEFAIATGRSFNSANKIRKKIGLEIY LICNNGANIYNKNGELIKNNVMPADLIRKVVRFLTENKIGYFGFDGSGANFYVPYGTEID DEFLKEHTPHYIKSSEDIDKLPALEKILIIEEDSERIYEIKDLIHDSFDDELEIVISADD CLDLNIKGCSKRGGVEYISQELEINPREIMAFGDSGNDYKMLKYVGHPVAMKDSFMSKRD FENKTDFTNDESGVAKYLQQYFNL >gi|292606589|gb|ADGG01000021.1| GENE 98 91242 - 92075 1004 277 aa, chain + ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 1 277 1 277 277 494 92.0 1e-140 MENIITNEQINEAIFLNKKEKIEESLRTTYRKKIWKNFIKAIKEFDLIKDGDKIAVGVSG GKDSLLLCKLFQELKKDRSKNFEVKFISMNPGFEALDVDKFKENLIEMGIDCELFDANVW QIAFEEAPDSPCFLCAKMRRGVLYKKVEELGFNKLALGHHFDDIVETTMINMFFAGTVKT MLPKVPSTSGKMDIIRPLAYVREKDIINFMKYNEIQAMSCGCPIEAGKVDSKRKEVKFLL QELEEKNPNIKQSIFNAMKNINLDYVLGYTNGNKSKK >gi|292606589|gb|ADGG01000021.1| GENE 99 92084 - 92233 170 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNFYLKLLIKILERSMTAKDSEILKKLKSGYDLSSEEKKELEELIDNLI >gi|292606589|gb|ADGG01000021.1| GENE 100 92245 - 94755 3000 836 aa, chain + ## HITS:1 COG:FN0867_1 KEGG:ns NR:ns ## COG: FN0867_1 COG1022 # Protein_GI_number: 19704202 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Fusobacterium nucleatum # 1 606 1 606 606 997 85.0 0 MSIKFLYDRQKTAITYGEQKISYADVIKYVNFYSDFLDIEKGDRSALMMENRPESIFSFF SIWAKKGIAISLDAGYTVDQLAYVLGDSEPKYLFVSNKTKEVAEAANSKLNNAVKIINVD EIELPTDYKIKQEEFSNDSNEDVAVLVYTSGTTGNPKGVMITYENIETNMAGVRAVDLVN ENDVILAMLPYHHIMPLCFTLILPMYMGVPIVLLTEISSATLLKTMQENRVTVILGVPRV WEMLDKAIMTKINQSSIAKFMFKLASKTNSMSIRKMLFSKVHKQFGGHIRLMVSGGAKID KSILEDFRTMGFRAIQGYGMTETAPIITFNVPGRERSDSAGEVIPNVEVKIADDGEILVK GKNVMKGYYKNETATKEAFDAEGWFHTGDLGRMEGKYLIIIGRKKEMIVLANGKNIDPND IEAEIMKNTDLIKEIAVTEYNAQLLAIIYPDFEKLQAQQIVNIKDAIKWEVIDKYNVTAP NYKKIHDIKIIKQELPKTRLGKIRRFMLKDLLEDKVEAPEKKIEKKVVEVPSEIKEKYDI INKYITERYNKDIDLDSHIELDLGFDSLDIVEFMNFLNSTFEIEIVEQDFVDHKTISDII KLVEEKSGITSEKAVEKVDKNENLKKIIDSDSDVKLPPSAKYAKVLKFLFSPLFKFYFRY KYSGKENLGEGAGIIVGNHQSYLDAFMLNNAFSYKELNNNYYIATALHFKSKTMKYLAGN GNIILVDANRNLKNTLQAAAKVLKSGKKLLIFPEGARTRDGQLQEFKKTFAILAQELNVP IYPFVLKGAYEAFPYNKKFPKRHDISVQFLEKIDPQNKTVEELVEETKDKIAKNYY >gi|292606589|gb|ADGG01000021.1| GENE 101 94780 - 95466 805 228 aa, chain + ## HITS:1 COG:FN0866 KEGG:ns NR:ns ## COG: FN0866 COG0670 # Protein_GI_number: 19704201 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Fusobacterium nucleatum # 5 228 1 224 224 198 58.0 9e-51 MYYDMNDIDVRSSNNFLRKVFFYMALGVAISFGTGIYLYLYNQELLFSLARYFNILGIAG LGMVLVLNFFLKKMSAGIARILFILYSVVIGTIFSTVGFAYSPLAILYAFASALTIFVVM SIYGFFTKEDLSSYRTFLIVGLISLIVMGLFNIYLGVGRLYWIETIFGIVIFTGFTAYDV NRIKHISYQLENEEGENVEKLSIVWALELYLDFINLFLYLLRIFGKRK >gi|292606589|gb|ADGG01000021.1| GENE 102 95485 - 96261 1086 258 aa, chain + ## HITS:1 COG:no KEGG:FN0865 NR:ns ## KEGG: FN0865 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 20 258 1 241 241 367 83.0 1e-100 MKKILLLMFSVLCVNSFSYVERNEQVGSRGLELMRESNINQNMGLSKESGSTQIIDAYAG NGKFSKTKGFMIGTTSNLVAYPNITAGVTVAYDKYKYKPGSNDYWGRDYDLNTYFSYKLD KNLFTLGLGYSQSRHVEKRGYIGNLEYGRFLTPSTYLYAGIEEQNRNYKNSEDLNFVNYK VGVLRQDTWKKLKFVNGVEVNMDNKKYDREERGRGNVTFVSRASYYIYDDLLFDVQYRGT KNSKFYDNVVGVGFTHYF >gi|292606589|gb|ADGG01000021.1| GENE 103 96464 - 97036 792 190 aa, chain + ## HITS:1 COG:no KEGG:PFLU4248 NR:ns ## KEGG: PFLU4248 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens_SBW25 # Pathway: not_defined # 1 190 54 231 231 148 45.0 1e-34 MYPLAQFYLSNLPYIPEALKKFEYITVFMGEDFPEYSNTDGLVSRNGNGWILRTYTKDDV LVKNEYLRDDNFCPKAYPLEAKFHAEDYPIWDGGGLDEDLEIEICDLEEEFDDEVSYYQD IGNDHTYLHKFGGYPSYCQPGLGLEVEEGYNFVFQISSDDVAQYNVVDSGSLMFFYNENE DKWMMYFDFY >gi|292606589|gb|ADGG01000021.1| GENE 104 97223 - 98719 1458 498 aa, chain + ## HITS:1 COG:FN0858 KEGG:ns NR:ns ## COG: FN0858 COG1640 # Protein_GI_number: 19704193 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Fusobacterium nucleatum # 1 498 1 498 506 810 83.0 0 MKRECGVLLAISSLPSAYGIGDFGKEAYRFVDFLEASGQSLWQILPLCPVEYGNSPYQSP STFAGNFLYLDLEDLVDNEYLTQGDIDVLKSEVSSVDYEYIKSQKESLLKKASQAFFYKN TEESEFKKFQSENQFWLEDYALFLSLNKKFKGKMWNTWDKGYKFRERKSIEEAKKEFEEE YKYESFIQYYFYKQWKKLKDYANSKGIKIIGDLPIYVASNSADTWQHPKLFCFDKHLKIK AMAGCPPDYFSKKGQLWGNVLYDWEAMKKDNYSWWEQRIKHSFLLYDILRLDHFRGFASY WAIRYGEKTAINGRWEIGPRIQFFRDLERKVKNIDIIAEDLGTLTADVFKLLRQTNYPNM KVLQFGLTEWDNMYNPKNYTENSVAYTGTHDNMSMVEWYSTLNKNEKFICDENLKNFLNN YNTNIWEPIQWRAIEALYASKSNRVIVPLQDILGLGADSRMNTPSTVGDNWVWRVYWEYR HGDLENKLYNLAKRYQRI >gi|292606589|gb|ADGG01000021.1| GENE 105 98733 - 101099 3316 788 aa, chain + ## HITS:1 COG:FN0857 KEGG:ns NR:ns ## COG: FN0857 COG0058 # Protein_GI_number: 19704192 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Fusobacterium nucleatum # 1 788 1 788 789 1434 91.0 0 MEFNKEKWKKKLEEKLLERFSVSLKDASSFEVYRALGETVISFIARDWYETKEKYSKTKQ AFYLSSEFLMGRALGNNLINLGIDKEVREFLEEIGIDYNQVEDEEEDPALGNGGLGRLAA CFMDSLATLNLAGQGYSIRYRNGIFNQYLRDGYQVEKPETWLKYGDVWSIMRPEDEVIVN FGNGSVRALPYDMPIIGYGTKNVNTLRLWEAHSINDLDLGVFNQQDYLHATQDKTLAEDI SRVLYPNDSTDEGKKLRLRQQYFFVSASLQDIIKNFKKVHGREFTKIPEFIAIQLNDTHP VIAIPELMRILVDIEGVLWEDAWEIVKKTFSYTNHTILAEALEKWWVGLYQEVVPRIFQI TEGIHNQFKNELAQLYPNDQDKQNRMQIIQGNMIHMAWLAIYGSHKVNGVAELHTEILKE RELRDWYELYPEKFLNKTNGITQRRWLLKSNPQLASYITELIGDAWIKDLSELKKLEQFL DDKNVLDRIWDIKIEKKKELVEYLRETQGIDINPNSIFDVQVKRLHEYKRQLLNIFQVYN LYQQLKQNPSMDFTPTTYIFGAKAAPGYKVAKGIIRLINDVAQIINGDNDVKDKLKVVFV ENYRVTVAEKIFPAADISEQISTAGKEASGTGNMKFMLNGALTLGTLDGANVEIAKEAGE ENEYIFGMRVEDIDTLIKKGYDPRFPYNNVSGLKQVVDALIDGSLSDLGSGIYREIHSLL MERGDQYFVLEDFEDYRKTQRTINREYKDKYSWAKKMLKNIANAGKFSSDRTILEYANEI WNIKEAKI >gi|292606589|gb|ADGG01000021.1| GENE 106 101127 - 102965 2145 612 aa, chain + ## HITS:1 COG:FN0856 KEGG:ns NR:ns ## COG: FN0856 COG0296 # Protein_GI_number: 19704191 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Fusobacterium nucleatum # 1 607 4 611 611 1088 88.0 0 MSGQMEHYLFHRGEYRQAYEYFGAHPNRSSTIFRIWAPTAKSVAVVGDFNNWNAREEDYC KKITNEGIWEVEIKKVKKDAVYKFQIETSWGQKILKADPYAFYSELRPQTASVVNGKPKF RWGDKKWLNNREIGYAKPINIYEVHLGSWKKKEDGTYYNYREIAELLVEYMLEMNYTHIE IMPITEYPFDGSWGYQATGYYSVTSRYGTPEDFMYFVNYFHKNNLGVILDWVPGHFCKDA HGLYRFDGSACYEYEDQNLGENEWGTANFNVARNEVRSFLVSNLYFWIKEFHIDGVRMDA ISNMLYHKDGVSENRASIEFLQYLNQSLHEDYPDVMLVAEDSSAWPLVTKYQADGGLGFD FKWNMGWMNDTLKYIEQDPFFRKSHHGKLTFSFMYAFSENFILPLSHDEIVHGKNAILNK MPGYYEDKLAHVKNLYSYQMAHPGKKLNFMGNEFVQGLEWRYYEQLEWQLLKDNKGSKDI QKYVKALNTLYLEEKALWHDGQNAFEWIEHENIDENMLIFLRKTPDTDDFIIVVFNFSGK DHDKYPVGVNSEGEYECILDSNDKKFGGSYQGKKKNYKTIKKSWNNREQCIEVKIAKNST IFLKHKKGNEED >gi|292606589|gb|ADGG01000021.1| GENE 107 102968 - 104101 1508 377 aa, chain + ## HITS:1 COG:FN0855 KEGG:ns NR:ns ## COG: FN0855 COG0448 # Protein_GI_number: 19704190 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 376 3 378 384 684 89.0 0 MKRKKMIAMILAGGQGSRLKQLTEDLAKPAVAFGGKYRIIDFTLTNCSHSGIDTVGVLTQ YEPHILNNHIGRGSPWDLDRMDGGVTVLQPHTRKNDEKGWYKGTANAIYQNIKFIEEYNP EYVLILSGDHIYKMNYDKMLQYHIQKKADVTIGVFRVPLKDAPSFGIMNTRDDMTIYEFE EKPKEPKSDLASMGIYIFNWEELKKYLEEDEKNPNSDNDFGKNIIPNMLNDGKKLVAYPF EGYWRDVGTIQSFWDAHMDLLSENNDLDLFDKNWRINTRQGIYTPSYFETGSKIKNSLID KGCLVEGEIYHSVIFSGVKIGKNSKVIDSIIMADTEIGDNVTICKAIIANDVKIADNVVL GDGKEIAVVGEKKVIEK >gi|292606589|gb|ADGG01000021.1| GENE 108 104119 - 105282 1326 387 aa, chain + ## HITS:1 COG:FN0854 KEGG:ns NR:ns ## COG: FN0854 COG0448 # Protein_GI_number: 19704189 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 387 1 387 387 664 87.0 0 MIRNYMAIIYLGDNKQNISPLTKVRSLASIPVGGSYRIIDFALSNVVNSGIRNVGLFCGN EELNSLTDHIGMGAEWDLARKKDGIFIFKRMLDDDLSLNQSRISKNMEYFFRSTQDHIVA LNGHMVCNLDISDLIEKHKESGKEITMVYKKVKKANEHFNNCSSVKIDENNRVIGIGQNL FFREEENISLDAFVLSKELMLKLLIDSIQEGKYNVLSEIIARKLPSLNVNAYEFKGYLQC INSTKEYFNFNMNILKKEIREDIFGLKSGRRILTKVKDTPPTIFKETAEVENSLISNGCI IEGKVINSVLSRGTIVEKDVVLEECVILQDCHIKAGSHLKNVIVDKNNIIHENEKLSASE EYPLVIEKGMKWNTKEYQDLMDYIKNK >gi|292606589|gb|ADGG01000021.1| GENE 109 105298 - 106683 1797 461 aa, chain + ## HITS:1 COG:FN0853 KEGG:ns NR:ns ## COG: FN0853 COG0297 # Protein_GI_number: 19704188 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Fusobacterium nucleatum # 1 460 1 460 461 828 87.0 0 MKILFATGEAFPFIKTGGLGDVSYSLPKALVQKEKLDVRVILPKYSKISNELLKDARHLG HKEIWVAHHNEYVGIEEVELEGVIYYFVDNERYFRRLNVYGEYDDCERFLFFSKAVVETM DITDFKPDIIHCNDWQTALIPIYLKERGIYDVKTVFSIHNLRFQGFFYNNVIEDLLEIDR AKYFQDDGIKYYDMISFLKAGVVYSDYITTVSASYAEEIKTPEFGEGIHGLFQKYDYKLS GIVNGIDKASYPLSKKAHKTLKANLQAKLGLEIEEATPLVAIITRLDRQKGLDFILEKFD EMMTLGIQFVLLGTGEKSYENFFRYKESQYRGYVCSYIGFNQELSTEIYAGADIFLMPSV FEPCGLSQMIAMRYGCIPVVRETGGLKDTVKPYNEYTGEGDGFGFKQANGDDMIKALRYA VTMYRRPEVWKEIIANAKKRDNSWKEPAKRYKEIYQKLLEN >gi|292606589|gb|ADGG01000021.1| GENE 110 106750 - 106962 171 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782136|ref|ZP_06747462.1| ## NR: gi|294782136|ref|ZP_06747462.1| riboflavin synthase alpha chain [Fusobacterium sp. 1_1_41FAA] # 1 70 1 70 70 102 100.0 6e-21 MEILDKKSNRMSRANAGVSERSEFPDLQRILDFLSLRNLLSNKLFFTFYYFATALFVLIS KIFAIFFILV >gi|292606589|gb|ADGG01000021.1| GENE 111 106992 - 107483 557 163 aa, chain + ## HITS:1 COG:FN0742 KEGG:ns NR:ns ## COG: FN0742 COG4807 # Protein_GI_number: 19704077 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 8 163 1 156 156 232 79.0 2e-61 MRESEVIMTNNDFLRRLRYALNLRDSNTVQIFKKGGLTVTREDVINYLKKDIDEGFKKLS NSHLMIFLDGLIIYKRGEKKDAGPSPKIKITKNNLNNILLRKLRIALAFKSYDMIEVFKL GGVEISEAELNALFRSEDHRNYKECGDKYIRVFLKGLIEYYRD >gi|292606589|gb|ADGG01000021.1| GENE 112 107499 - 109967 2152 822 aa, chain + ## HITS:1 COG:FN0743 KEGG:ns NR:ns ## COG: FN0743 COG1199 # Protein_GI_number: 19704078 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Fusobacterium nucleatum # 82 822 1 741 741 1173 84.0 0 MVMDIKDRFSEKSLQVIKEYLIENDNKSIIFKATFDENEVIQEPFFLSLYKKKTFEETLT KVKRDEVVIRITKPNQLYPNDLELELSEELFNRRNIAYCLLSSDLDDFYFIQDIDRTNLE KIDIEDYFLEDGILVNEIKGFEHRHEQEEMAKNIQNSINNDKKIIVEAGTGTGKTLAYLI PAIKWAIANKKKVIIATNTINLQEQLLLKDIPLAKSVIKDEFTYALVKGRSNYLCKRLFT ELSLGKSVDIETFSMEAREQIEYILKWGNKTKTGDKAELPFEVYSDVWELVQSTTELCLG KKCPFRKECFHMKTRMKKMEADILISNHHVFFSDLNVRAETDFDSEYLILPRYDMVIFDE AHNIESVARSYFSVEVSKISFTRLLHRIYQKKSKKKKEKSALTRVEETIDEKYLEKSGDY LELLKTMKSEIYSLQTIGDEYFDEIRKMFETNTEAPIRKSLNNFEMTKSNFLENLRDKKE FFQAKLAEFLNLMMAFNNVIDEEKDKNPEVINFNNHLKMFKKYIDSFKFINNFSDANYVY WLDINSKRTNVVLTATPLNIAQKLSSVLFENLNRLVFASATIMANGNFEYFKKSLGLDEE ECIECFIESPFDYEHQMSVYIPADIQDSENLNAFVTDASKFILEILKKTKGKAFILFTSY TMLNQIYYSVVNKLKNSNFEIFLHGEKPRSQLIKEFKEAKNPVLFGTTSFWEGVDVQGEN LSNVIITKLPFLVPTDPIVAAISKKIEEAGGNSFSDFQLPEAIIKFKQGVGRLIRKKTDR GNVFILDSRIIKKRYGSAFIKALPSQKNIKILEKDDIIKEIE >gi|292606589|gb|ADGG01000021.1| GENE 113 109984 - 112056 2249 690 aa, chain + ## HITS:1 COG:FN0745 KEGG:ns NR:ns ## COG: FN0745 COG1480 # Protein_GI_number: 19704080 # Func_class: R General function prediction only # Function: Predicted membrane-associated HD superfamily hydrolase # Organism: Fusobacterium nucleatum # 62 690 1 629 629 990 86.0 0 MKKFTIFGFKFLFEVKKKDNSDEEKYSDTYFLKEKVFYLILALFLITISAKIPILFRNNN YMIGDVVKSDIYSPKTIVFRDKIGKDKIIQDMINQLDKEYIYSSDAADIYTNEFDNFHKE IIAIKKGNLQTFDYSGFERKMGKAMPETLVKKILEEDEDKINSTFEKLSEHLKNAYTAGI YKEKNSIRVNEPVKSEIDNLDAFERDLINYFLIPNYIYDEAKTKSAINEKVSQINDQYIE IKAGTLIAKTGEILTERKIDILDKLGIYNYKMSIFIITLNIIFLLVISSIFNVVTTRFYS KDVLEKKKYKAVMLLMIVTLLVFRIVPDSMIYLVPIDTMLLLLMFIVRPRFSIFLTMMLI SYLLPITDYDLKYFTIQSIAILATGFLSKNIGTRSSVIAIGIQLAILKILLYLILSFFSM EESFGVALNTIKLFVSGLFSGMFAIALLPYFERTFNILTVFRLIELADLSQPLLRKLSIE APGTFQHSMMVATLSENAVIEIGGDPIFTRVACYYHDIGKTKRPQYYVENQTDGKNLHNN ISPFMSKMIILAHTKEGAEMGKKYKIPKEIRDIMFEHQGTTLLAYFYNKAKEIDPNVQEE EFRYSGPRPQTKESAVILLADSIEAAVRSLDVKDPIKVEEMVRRIVNAKIADNQLSDANI TFKEIEIIINSFLKTFGAIYHERIKYPGQK >gi|292606589|gb|ADGG01000021.1| GENE 114 112071 - 112559 788 162 aa, chain + ## HITS:1 COG:FN0746 KEGG:ns NR:ns ## COG: FN0746 COG0319 # Protein_GI_number: 19704081 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Fusobacterium nucleatum # 1 161 1 161 162 233 85.0 2e-61 MELVLDFSYELDNEKYNEFIDKLYEDAYLENYIKKVLEIEEVEAERPLYLSVLLTDNKNI QVINREYRDKDAPTDVISFAYHETDDFNIGPYDTLGDIIISLERVEEQSSEYNHSFEREF YYVLTHGILHILGYDHIEEEDKKVMREREEAILSSFGYTRDN >gi|292606589|gb|ADGG01000021.1| GENE 115 112632 - 113513 1579 293 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 5 292 2 279 279 265 47.0 9e-71 MKIWKKILKLATVGVAVFALAACGNKTEEKTEAQAPAQEASVAKARTVQEIKDSGVIRIG VFTDKAPFGYIDENGKNQGYDVYFTDRLAKDLGVQVEYISLDPASRVEYAETGKADIVAA NFTVTPERAEKVDFSLPYMKVSLGVVSPDGAVIKSVEELKDKTLIVSKGTTAEYYFSKNH PEVKLQKYDSYADAYNALLDGRGDAFSTDNTEVLAWAKSNPGFTVGIESLGDVDTIAVAV QKGNTDLLDWINNEIKELGKENFFHEAYKATLEPIYGDSADPDSIVVEGGEVK >gi|292606589|gb|ADGG01000021.1| GENE 116 113531 - 114298 258 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 238 1 253 563 103 28 7e-21 MKQLDKVVLSAKDAVKNYGELEVLKGINLDIHQGEVVVIIGASGCGKSTFLRCLNGLEDI QAGDIVLDNEIKFSDTKNNMTKIRQKIGMVFQSYELFPHLTILDNILLAPLKVQKRNKEE VKEQALKLLERVNLLDKQNSYPRQLSGGQKQRVAIVRALCMNPEIMLFDEVTAALDPEMV REVLDVMLELAREGMTMVIVTHEMQFARAVADRVIFMDNGNIAEQGEAEEFFSNPKTERA QKFLNTFTFKNKFYK >gi|292606589|gb|ADGG01000021.1| GENE 117 114295 - 114975 680 226 aa, chain - ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 6 223 6 223 225 225 57.0 5e-59 MLATVIDLLSKGTNLERLLYGLWITIKLSLISAILSVIFGILFGLFMVIKNPLIRIISQV YLQIIRIMPPLVLLFIAYFGVTRMYGLHISPEASAIIVFTIWGTAEMGDLVRGAIESIPK IQIESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQ QIIDTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLAKFLEKRWSRI >gi|292606589|gb|ADGG01000021.1| GENE 118 114956 - 115615 644 219 aa, chain - ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 27 219 7 199 206 198 53.0 5e-51 MDWEFIAKYTPEFIHAGILTLKIGGIGIMLSIVVGILGSWVLYENFKFFKQIIIGYVELS RNTPLLVQLFFLYYGLPKIGIKFSPELCGIIGLTFLGGSYMIETFRSALETIDKIQKESA LSLGMTKWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFVTKDLIGLY YKTEESLFMLVVGYLIILLPLSLFGVWLERKLKYVGYSN >gi|292606589|gb|ADGG01000021.1| GENE 119 115869 - 117851 2499 660 aa, chain + ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 1 660 1 660 660 1128 85.0 0 MENLHLKSFLEYKFLSNLDFNPEGKNLAFSLSESDYEKNSYKHYIYSLNTETKEIRKLTH FGKEKNSLWLNNDIILFSSDRDTDIEEKKKLGETWTLFYALDIKNGGEAYEYMRLPLDVS NIKIVDENNFILLADYDNNSYHLNDLKGEEREKAIKEIEENKDYEVLDEIPFWSNGHGFR NKKRDRLYHYDKLNNKVTPISDEYTNVELVNVKDNKVIFAGRTFTDKQGLTSGLYVYDVK SQNLEVIVDKNLYDISYANFIEDKIICALSDMKAYGVNENHKLYLIDSNKNITLLNDNDT WLSCTVGSDCRLGGGKSFKVIGNKLYFLATIAERVYLKSIDTNGKVEILSDKDGTIDFFD IANGEIYYVGMRDYTLQEVYKLENNESTKLTSFNEEINKKYKISKPEVFDFTTNGATTKG FVIYPVDYDKNKTYPAILDIHGGPKTVYGNVFYNEMQVWANMGYFVFFTNPHGSDGYGNE FADIRGKYGTIDYEDLMNFTDYVLEKYPIDKSRVGVTGGSYGGYMTNWIIGHTDRFRCAV SQRSISNWISKFGTTDIGYYFNADQNQATPWINHDKLWWHSPLKYADKAKTPTLFIHSEQ DYRCWLAEGIQMFTALKYHGVEARLCMFRGENHELSRSGKPKHRLRRLTEITNWFEKYLK >gi|292606589|gb|ADGG01000021.1| GENE 120 118063 - 119868 1991 601 aa, chain + ## HITS:1 COG:FN1127 KEGG:ns NR:ns ## COG: FN1127 COG4907 # Protein_GI_number: 19704462 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 562 1 567 606 731 68.0 0 MKKNILKIFLFFLISIVSFAASFRIEKLDIEANLQKDGSMVVSEAVTYDIDEINGVYFDI DAKGFGELQYIQVFEDDSTGGFKEVDTSNYEVSVSDELYRIKLYSKNHNNRRTFKFVYKL PEAITVYDDVAQFNRKMVGKEWQQGINYITAKVIIPVSASYDNSNILVFGHGPLTGEVDK EGNTVVYRLNNYYPGDFLEAHILMEPEIFSEYNKSKIVHKDMKQKLLDMEAKFADEANAE RDKAIRQQEMINKVFEKPGLIFGVLSSIWGALMYYIHVIFKRKNKVKNSVGKYLRELPDN SSPALVGGFMTNSINDNEILATIVDLVRRKILTLETSDKNSIIILTGSTENLSAQEKAIV DIYINDFGDGKSLDLKSFGFFQKVPMSVARKFEKWRAMVQSEMNRKNLTYEGFGCLGVIF FALFGPILAFAGLIFGMVTGNKMFLLIVVMGIILFVSGAKAKYPRKELAEAKDKWQAFKN FLSDYSQLEEAKITSVHLWEQYFVYAVALGVSDKVVKAYKKALDMGVINDVQGVNSLAYS PIFNPMFSRSFSNLNGMVSRTNSGASSAIASSRRSSSSGGGGGFSSRSSGGGGSRGGGGG F >gi|292606589|gb|ADGG01000021.1| GENE 121 119911 - 120462 863 183 aa, chain + ## HITS:1 COG:FN1125 KEGG:ns NR:ns ## COG: FN1125 COG1704 # Protein_GI_number: 19704460 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 18 183 18 183 183 286 93.0 2e-77 MIVLGIVLGIVVVLALLAISYKNKFVVLDNRVKNAWSQIDVQMQNRFSLVPNLVETVKGY AKHEKETFEGIANAKAKYMSANTAAEKMEANNQLSGFLGRLFAISEAYPELKANTGFENL QGQLVEVENKIRFARQFYNDTVTEYNQAIQMFPGSLFAGFFNYHNAELFKANDMAREEVQ VKF >gi|292606589|gb|ADGG01000021.1| GENE 122 120471 - 121661 181 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 263 391 211 344 347 74 31 6e-12 MKKVYLAVAVLALIFGFSYCYKKDKTEKTATEKEAVVNEVKNEEMIIPGYALGEIPAISI PEIPNLSVSENPDAKITLDMAKKISSVPGITISPVKVEDSNIVGGSYSMQIGKNGDGQYS DKNKSVQTDGNGAGQYEDDKVTIQRDEDGAGQYINKVTGVTLQVDKDGAGQYIDEKNDLS IQVNKDGTGLYTNKKNNVTIYVNENDVRYVSTNIEMVNNGDGSGTYTDKSKNLVIENDGK GKAKITFNGQTTEVDAKPLEKPGKLAKLEMVPPVPSIEANSLLINLDSEVLFDVDKYDVR VHPEAEEVLKNLAIVLKEMDVKNFEIDGHTDSDGSDEYNQVLSEKRANSVKNFLVSQGVT AEITTKGYGESKPVASNDTAEGKQKNRRVEIIIPTI >gi|292606589|gb|ADGG01000021.1| GENE 123 121708 - 122250 750 180 aa, chain - ## HITS:1 COG:no KEGG:FN0212 NR:ns ## KEGG: FN0212 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 180 1 180 180 259 83.0 4e-68 MLNFEKINNMIDLIEKNEIMPGLSFNEFAIAFYQEVKLVPLSRYLKTNNRAKRMPKIMTM KKAGELLLFTKTDDETLSFLKRKGYNEIPELDYKTMMLLRRLDPIDNWKKILAFFDGDKT VEEINLSTKPILFPQEIKKLEEFIKDELSINDEEFEKFMKLSSLAIKNKELTKAIRKLTR >gi|292606589|gb|ADGG01000021.1| GENE 124 122280 - 122786 648 168 aa, chain - ## HITS:1 COG:FN0213 KEGG:ns NR:ns ## COG: FN0213 COG1778 # Protein_GI_number: 19703558 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Fusobacterium nucleatum # 1 168 1 168 168 272 87.0 3e-73 MKDIKILVLDVDGTLTDGKIYVDDKDNSFKAFNVKDGFALVNWLKLGGEVAILTGKKSNI VERRAKELGIKYVIQGSKNKTQDLKKLLDELDITFENTAYMGDDLNDIGVMKKVGLTACP KDSVAEVLEICDFISTKNGGDAAVREFLEFIMKQNGMWQEVLNKYSNE >gi|292606589|gb|ADGG01000021.1| GENE 125 122783 - 123367 822 194 aa, chain - ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 189 1 189 190 307 87.0 6e-84 MRVIGIDPGTAIVGYGIIDYNKNKYSIVDYGVILTSKDLSNEERLEIVYNELDKILKKYK PEFMAIEDLFYFKNNKTVISVAQARGVILLAGKQNNIPISNYTPLQVKIGITGYGKAEKK QVQLMVQKFLGLSEIPKPDDAADALAICITHINSLSSNISFTGTSNLKKITLSSDTNKIS LEEYKKLLKNKEVL >gi|292606589|gb|ADGG01000021.1| GENE 126 123367 - 124119 279 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 22 250 11 232 236 112 31 2e-23 MMHIFEVLDNFLKIKFTGELTVEIVCFRLILSILFGGIVGYEREKNNRPAGFRTHILVCF GAAIVSMVQDQLRLNILDLAHTEGPTVAAVIKTDLGRLGAQVISGVGFLGAGSIMKEKGE TVGGLTTAAGIWATACVGLGIGWGFYNIAAVAVVFMIIIMVTLKKLESKLVRKARLLKFE VKFFDSEDFANGLIEAYEVFRQRSIKITEIDKYQDDALVTFTVSMRGRNNISDVVVSLSS IQNVEYVRDV >gi|292606589|gb|ADGG01000021.1| GENE 127 124144 - 124908 1009 254 aa, chain - ## HITS:1 COG:FN0216 KEGG:ns NR:ns ## COG: FN0216 COG1028 # Protein_GI_number: 19703561 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Fusobacterium nucleatum # 1 250 1 250 250 393 82.0 1e-109 MKVFIIGGSSGIGLSLAKRYLSLGNEVAICGTNDEKLKKIEEVNKGLKLYKVDVRNKNDL KSAIEDFSQGNLDLIINSAGIYTNNRTTKLTNDEAFAMIDINLTGVINTFEAVRDMMFTN NKGHIAIVSSIAGLIDYPKASVYARTKLTIMGVCETYRAFFRDYNINVTTIIPGYIATDK LKSLSKEDITNKPTVLSEEKSTDIIVKAISDKKEKVIYPLSMRILIAIITKLPKKLLTYL MIKQATWGEKDTRK >gi|292606589|gb|ADGG01000021.1| GENE 128 125085 - 125738 656 217 aa, chain + ## HITS:1 COG:FN0217 KEGG:ns NR:ns ## COG: FN0217 COG0664 # Protein_GI_number: 19703562 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 1 217 1 217 217 288 80.0 7e-78 MISKEDIKQLETIFPFWFELNQNDRAKIILSSRVLSLKKEAIFFNYHELDGLLFLKSGRL RFFLSSLDARDLPLYYLKETEVEFFEDFNNKLISPILDIAFVVERNSEVLLIPCSILNLF RKKYSIMERFLHDLTREKLSKSLLSLQNILLIPLKERLLNFLYSLKKSEILLTHEEIAKK IGSSREVISRNLKILEKENFLKMNRKKIIIIGRGEVL >gi|292606589|gb|ADGG01000021.1| GENE 129 125735 - 126604 1283 289 aa, chain + ## HITS:1 COG:FN0218 KEGG:ns NR:ns ## COG: FN0218 COG2071 # Protein_GI_number: 19703563 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Fusobacterium nucleatum # 1 289 1 289 289 461 82.0 1e-130 MKKPIIGISASMIFEEKDELFLGDKYSCVAHSYVDAIYKSGGIPVVLPILKDVSAIREQV KLLDGIVLSGGRDVDPHFYGEEPLEKLEAIFPERDVHETALIKAATDLKKPIFAICRGMQ ILNVVYGGTLYQDISYAPGEHIKHYQIGTPYQATHSIKIDKSSTLFRMADKLEVERVNSF HHQALKKLADGLKVVATAPDGIIEAVEGTNEDGMFILGVQFHPEMMYDKSTFARSMFKRF ITICLESRPADVVLKNELHHEEEYKTKEIADRIKELEEEEKKEFFKGDL >gi|292606589|gb|ADGG01000021.1| GENE 130 126630 - 127355 790 241 aa, chain - ## HITS:1 COG:FN0219 KEGG:ns NR:ns ## COG: FN0219 COG3279 # Protein_GI_number: 19703564 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Fusobacterium nucleatum # 1 239 1 238 240 368 87.0 1e-102 MISCIIVEDELPAREELKYFINEEKEIKLIAEFDNPLDTLTFLEKNAMDVIFLDINMPDM NGISLGKIITKMYPNMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIRNLLKSLVNIK NENITNEIKNNNFRKITINMDDRLYVVSLNDVDYIEADEKETLIFSNQKKYVSKIKISKW EEMLKGNNFYRCHRSFIINLDKITEIEQWFNSSWVIKIKNYSTAIPVSRNNIKELKELFL G >gi|292606589|gb|ADGG01000021.1| GENE 131 127348 - 129024 1782 558 aa, chain - ## HITS:1 COG:FN0220 KEGG:ns NR:ns ## COG: FN0220 COG3275 # Protein_GI_number: 19703565 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Fusobacterium nucleatum # 18 558 1 541 541 850 86.0 0 MNIQFISHLISNIGCSAIIAFFFIKIDKANIIIKSKAKSKKDIVALSFFFSLLSISGTYI GLNFNGAILNTRNMGVVAGGLLGGPYVAAITGLIAGTHRAIVNLGRETAIPCAIATIIGG FLTAYVSRFAKNKDRMFFAFLLAFVIENLSMALILLIQKDKVLAQSIVKNFYIPMVFMNS VGAAILILLVEDIIQKSELIAGNQAKLALEIANKTLPYFRKTENLSEVCKIIANSLGARA TVITDTKEIIAGFSSDKTVINRSNIRSSNTRKVLKTGEVMLVIKDDDEIIEDFFYISPHI KSCIILPLKEKNDVSGTLKIFFDTAEKITEKNRYLMIGLSHLISTQMEISKVENLISLLK YSELKALQSQINPHFLFNVLNTMTSLIRTNPEKAREVTIDLSKYLRYNLDNNLKNVELIK ELNQIDTYIKIEKARFGDKLNIIYDVDESLYNFQIPSLIIQPLVENSIKHGILKKRDKGF VKIIIKKIERDIEVEIEDDGIGIEQTIIDNLDKKIEENIGLKNVHQRLKLLYGEGLNITK LEQGTRIKFKILGGLKYD >gi|292606589|gb|ADGG01000021.1| GENE 132 129281 - 130705 2147 474 aa, chain + ## HITS:1 COG:FN0221 KEGG:ns NR:ns ## COG: FN0221 COG1966 # Protein_GI_number: 19703566 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Fusobacterium nucleatum # 1 474 1 474 474 753 88.0 0 MYSFIGSIIALVLGYFIYGKIVDRIFGSDDTKITPAKRLADGVDYMEMGWARAFLIQFLN IAGTGPIFGAVAGALWGPAAFLWIVFGCIFGGAVHDYLLGMMSVRQDGASVSEIVGENLG NGAKQIMRVFSVVLLLLVGVVFIMSPAQILKDITGVSYEIWLAVIIVYYLCATVLPVDQV IGKIYPVFGLSLLIMAVGIGGGLIINNADIPEIAFVNMHPAGKSIFPYLCISIACGAISG FHATQSPMMARCLRTEKDGRKVFYGAMISEGIIALIWAAAAMSFFGGIPQLAEAGPAAVV VNKISVGILGKVGGALALLGVVACPITSGDTAFRSARLTIADSLKYKQGPIVNRFVVAIP LFVLGIALCFIPFNVIWRYFGWANQTLATIALWAAVKYLANRGKNFWIALIPAMFMTVVV TSYILAAPEGFVRFFGDKDIKVIEHIAIIVGCVVSLGCTAAFFMSNKKANLITE >gi|292606589|gb|ADGG01000021.1| GENE 133 130902 - 131540 997 212 aa, chain + ## HITS:1 COG:FN1265 KEGG:ns NR:ns ## COG: FN1265 COG2885 # Protein_GI_number: 19704600 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Fusobacterium nucleatum # 11 212 1 202 202 272 85.0 4e-73 MKNRKIIASCMLALSLVGCTGFEAGNGGYTTGGAAGGAAVGALAGQIIGKDTKGTLIGAA VGSLLGMGWGAYKDNQARELKAALKGTQAEVRNDGNALVVNLPGGVTFASDSANISSGFY SALNGVAQTLVRYPETRIQVNGYTDSTGGDAHNQELSQRRANSVAQYLISQGVSSNRIVA NGFGSLNPIASNATPEGRQANRRVEVRILPAQ >gi|292606589|gb|ADGG01000021.1| GENE 134 131702 - 133006 1751 434 aa, chain - ## HITS:1 COG:FN0621 KEGG:ns NR:ns ## COG: FN0621 COG0427 # Protein_GI_number: 19703956 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Fusobacterium nucleatum # 1 431 1 431 434 746 85.0 0 MEKWQEKYKAKICSPDEAIQKIKSAKRISFGHICSESSVLTEALIRNKKLFKKLEIDHLL SIGKCEYAKEENSEYFHHNALFIGSKTREAANSSYGDYTPIFFYETAKIFGKDGDLSPDA MLLQVSTPDEHGYCSYGLSCDYTKSATESAKIVVAQINKFVPRTLGNCFIHIDDIDYIIL EDTPIPEIPTPVVGELEEKIGANCASLINDGDTLQLGIGAIPFAVLNFLKDKKDLGIHSE MVSDGIVDLIQAGIITNKRKNFNPNKVIATFLLGTKKLYDYANNNPAIELHPVDYVNNPM IIAQNNNMISINSAIQVDLMGQVNAEYINSKQFSGPGGQVDFVRGATMSNGGKSIIALPS TTADEKISRIVFTFEEGVPVTTSRNDVDYIITEYGIAHLKGKTLRERARLLIEIAHPKFR EELRRKAIEKFEIL >gi|292606589|gb|ADGG01000021.1| GENE 135 133204 - 133857 787 217 aa, chain + ## HITS:1 COG:FN0622 KEGG:ns NR:ns ## COG: FN0622 COG1059 # Protein_GI_number: 19703957 # Func_class: L Replication, recombination and repair # Function: Thermostable 8-oxoguanine DNA glycosylase # Organism: Fusobacterium nucleatum # 1 217 1 217 217 341 86.0 5e-94 MKKNEYFKEIEKIYKEIKVDIKKRLEEFKNTWEKGSNKDIHLELSFCILTPQSKALNAWQ AITNLKKDDLIFKGSAEELVEYLNIVRFKNNKAKYLVELREQMTKKGKIITKDFFNSLPT VYEKRDWIVKNIKGMSYKEAGHFLRNVGFGADVAILDRHILKNLVKLEVIDELPKTLSPK LYLEIEEKMRRYCEFVKIPMDEMDLLLWYKEAGVIFK >gi|292606589|gb|ADGG01000021.1| GENE 136 133854 - 134297 514 147 aa, chain + ## HITS:1 COG:no KEGG:SEN0273 NR:ns ## KEGG: SEN0273 # Name: not_defined # Def: rhs-associated protein # Organism: S.enterica_Enteritidis # Pathway: not_defined # 7 141 3 141 148 76 35.0 3e-13 MTFSEEIENEIKEFVNRTENIYYFPDSDYGVEYLNNNFSFLGTKIDLSKENNYISYDFKK NNFLDMIKFFEFKNIKEEILASNEIHYIGDGITNSELVFSGKDFFKVLEFLFINIPEHHY IFDVEKKWCLLIATEGWIAYGEKSIER >gi|292606589|gb|ADGG01000021.1| GENE 137 134403 - 135266 924 287 aa, chain + ## HITS:1 COG:FN0623 KEGG:ns NR:ns ## COG: FN0623 COG0679 # Protein_GI_number: 19703958 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 287 32 318 318 382 78.0 1e-106 MVDESSLNTMNKLVFRVFMSTLLFLNVYNIGDLSKLSINNLKLLGYAFIIIFVVVFLAWL IYMPKVKEKKKLSVLIQGVYRGNFVLFGLAIVDSIYGKEGLATVSLLTIVVIPTFNVLAV IILEYYSGREISKLKLVKQVFKNPLIIATLLGIVFILFKINIPKPIYKTLSDISKISTPL AFIVLGAELQFGNMLKNIKYLISVNLLRLIVNPLITIGIGKLIGFQGIELVALLSMSACP TAVASYTMAKEMKADGDLAGEIVATTSMFSILTIFCWVLILKNMAWI >gi|292606589|gb|ADGG01000021.1| GENE 138 135331 - 135960 621 209 aa, chain + ## HITS:1 COG:FN1803 KEGG:ns NR:ns ## COG: FN1803 COG1309 # Protein_GI_number: 19705108 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 205 12 216 217 248 66.0 7e-66 MMYFIEATQELILDEGLEKLSIKKIAEKAGYNSATIYNYFENLEVLILYASINYLKDYLN DLKNEITADMKAIEVYETVYKIFTKHSFEQPEIFHTLFFGKYSYKLENIIKKYYEIFPDE IEGHIDLTKAMLIQGNIYDRDLPIINKMVKDGNIKEEEAKFIMETIIRVHQSYLSDLLYK NDDSLIEKYTEGFFKIFNFLLKKEDTWQQ >gi|292606589|gb|ADGG01000021.1| GENE 139 135948 - 136448 521 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782165|ref|ZP_06747491.1| ## NR: gi|294782165|ref|ZP_06747491.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 166 1 166 166 281 100.0 8e-75 MATIIRLEKDGYMKDAFVGYSYTTAFFNAFVPAARQDLKSFLFMGGIYLFNSFISNFYRI YVQRNFVEYKYGVLISFIALIVSWVIGFFYNKYYTQKMLAEGWKPLKDDDYSNVLLKKYN YFEYTDNYLISDERTKEILDGVKKTEKKKALMFVVAAIIQILLYWL >gi|292606589|gb|ADGG01000021.1| GENE 140 136525 - 137121 426 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782166|ref|ZP_06747492.1| ## NR: gi|294782166|ref|ZP_06747492.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 198 1 198 198 305 100.0 7e-82 MGFSWTLLFWGFWVPLFRGRKKDFGLFFLFFLVKIGIIVLTVKAEFRALRSAEIFGFYRP SYILLIPTLIFVIIEVIEAWLTYYYNRYCTNTLLANGYYPEENDEYSIALLKEFTYIPYT KEELEDKSIREKYKKFSDFARKEERDKFKTFFAICLIICVIILIFWGVQYLRFYNFYNFK KYKGAICPLSYYISIDMK >gi|292606589|gb|ADGG01000021.1| GENE 141 137089 - 137604 739 171 aa, chain - ## HITS:1 COG:FN0747 KEGG:ns NR:ns ## COG: FN0747 COG0494 # Protein_GI_number: 19704082 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 171 1 171 171 293 89.0 1e-79 MKLLDIPNLKFLKVGVDSDPLNNNNLEYLEKQNAIAALIVNHVGDKVLFVNQYRAGVHNY IYEVPAGLIDEGEEPIHALEREVREETGYRREDYDIIYDSNTGFLVSPGYTTEKIFIYII KLKSDDIVPLELDLDETENLYTRWIDIRDAGKLTLDMKTIFSLHIYANIIR >gi|292606589|gb|ADGG01000021.1| GENE 142 137601 - 138947 1571 448 aa, chain - ## HITS:1 COG:no KEGG:FN0748 NR:ns ## KEGG: FN0748 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 20 448 1 429 430 619 82.0 1e-176 MDNIKRRIRQIEILALTLFMIILVCFLTYIINESENIFLGLFRIITSPAILVTDFIKVGG IGAAFLNALLILSFNYFLVRLFKIKITGVVIAMFFTVFGFSFFGKNILNILPFYLGGILY SVYTSTDFSEHLTSIAFSSALAPFISSVAFYGEVAYETSYINAILIGVLIGFIVVPLAKS LYDFHEGYDLYNLGFTAGILGSVIMAVLKLYHFEINPQFLVSSEYDMALKIICSSVFVAF IIVGFYINNNSFSGYFKLMRDDGYKSDFTQKYGYGLTYINMGMMGLVSVAFVTFTGQTFN GPILAGLFTVVGFSANGKTIFNTIPIFIGVLLASFGSKGSMFTVAISGLFGTALAPISGI FGPVAGIIAGWLHLAVVQNVGLVHGGLNLYNNGFSAGIVAGFLLPIFNMITDNNNQRKMN IQKKHMNFLKAVQKNIKNKMKKDEGENK >gi|292606589|gb|ADGG01000021.1| GENE 143 139144 - 139770 987 208 aa, chain - ## HITS:1 COG:FN0739 KEGG:ns NR:ns ## COG: FN0739 COG3404 # Protein_GI_number: 19704074 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Fusobacterium nucleatum # 1 206 1 206 212 335 95.0 3e-92 MKLVELDVLKFLDVVDSNSPAPGGGSVSALASSLGASLARMVAHLSFGKKNYEALADDVK AKFVANFDELLKIKNELNDLIDRDSEAYNTVMAAYKLPKETDKEKAARSAEIQKSLKYAI QTPYDIVVLSGKAISLLGEILANGNQNAITDIGVGTMLLMVGLEGGILNVKVNLSSIKDA EYVEKITKEIYDIKATAEKRKRKNNGNS >gi|292606589|gb|ADGG01000021.1| GENE 144 139793 - 140338 720 181 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 4 181 6 184 184 185 46.0 5e-47 MKYNLENLIKDFNSKKKLKFLFFWGHTENGDEITKACFSQWYSCKFVVDDITYHTAEQYM MAQKALLFGDNEIFHKIMSSKSPKEYKELGRKIKNFSDSKWNENKYQIVLKGNIAKFSQN EKLKAFLLNTGTKVIVEASPYDKIWGIGLSADQENIENPLTWNGENLLGFALMEVRDLIS E >gi|292606589|gb|ADGG01000021.1| GENE 145 140354 - 141595 1822 413 aa, chain - ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 1 413 1 413 413 775 97.0 0 MQADLVLYNIGQLVTSRELDNTKKMDNIEVIENNGYIVIEKDTIVAVGSGEVPKEYLSPA TEMVDLSGKLVTPGLIDSHTHLVHGGSRENEFAMKIAGVAYLEILEKGGGILSSLKSTRN ASEQELIEKTLKSLRHMLELGVTTVEAKSGYGLNLEDELKQLEVTKILGYLQPVTLVSTF MAAHATPPEYKDNKEGYVQEVIRMLPIVKERNLAEFCDIFCEDKVFSVDESRRILTAAKE LGYKLKIHADEIVSLGGVELAAELGATSAEHLMKITDSGINALANSNVIADLLPATSFNL MEHYAPARKMIEAGIQIALSTDYNPGSCPSENLQFVMQIGAAHLKMTPKEVFKAVTINAA KAVDKQDTIGSIEVGKKADITVFDAPSMAYFLYHFGINHTDSVYKNGKLVFKR >gi|292606589|gb|ADGG01000021.1| GENE 146 141677 - 142642 1534 321 aa, chain - ## HITS:1 COG:FN0741 KEGG:ns NR:ns ## COG: FN0741 COG3643 # Protein_GI_number: 19704076 # Func_class: E Amino acid transport and metabolism # Function: Glutamate formiminotransferase # Organism: Fusobacterium nucleatum # 1 321 1 321 321 624 96.0 1e-179 MAKIVECIPNYSEGKDLAKIDRIVAPYKNNPKVKLLGVEPDANYNRTVVTVLGDPEEVKK AVIESIGIATKEIDMNVHKGEHKRMGATDVVPFLPIQEMTTEECNEISREVAKAVWEQFQ LPVFLYESTATAPNRVSLPDIRKGEYEGMAEKLKQPEWAPDFGERAPHPTAGVTAIGCRM PLIAFNINLATTDMDVPKEIAKAIRFSSGGFRFIQAGPAEILDKGFVQVTMNIKDYTKNP IYRIMETVKMEAKRWGVKVTGCEIIGATPFASLTDSLKYYLACDGIKDDVDAMSMEKVVE LMVKYLGLTDFDVKKVLEANI >gi|292606589|gb|ADGG01000021.1| GENE 147 142830 - 143591 565 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 247 8 265 329 222 46 2e-56 MSEDLLIIENISKSFTVDKNKELKALKNINIRLKKGECIGIVGESGCGKSTLARIIVGIE KKTSGKIIFDDKEIDGISKTKDIQMIFQSPLSSFNPRMKIIDYMWEPLRNYFKLSKKESI PLITKSLIDVGLDETALEKYPHEFSGGQLQRITIARAIIIKPKLIVCDEITSALDVSVQK QILELLKKLQKDLALSYLFIGHDLAVVQNISQKIVVMYMGEIVEELNSIDLKTKAKHPYT NLLLNSVFEVNKV >gi|292606589|gb|ADGG01000021.1| GENE 148 143609 - 144388 252 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 232 1 221 223 101 31 3e-20 MKPLLEIKNLNINYKNSIKAVKNVSLTLEDNQIISIVGESGSGKSTLIRAILKLLPTGGK IESGNIFFLEKDILTLNKKELNKLRGKDIGMIFQDPNSTMDPIKTIEKQFIEYILEHNNI SKKEAINLAKEYLLKLSLTDVDRILKSYPFELSGGMKQRVAIAMSMAQSPRLLLADEPTS ALDVTVQAQVIQELKKIRENFKTAIILVTHNMGVASYISDKIAVMKDGELIEFGDKEQII NNPQKEYTKLLLNAVINLK >gi|292606589|gb|ADGG01000021.1| GENE 149 144401 - 145963 2189 520 aa, chain - ## HITS:1 COG:FN1111 KEGG:ns NR:ns ## COG: FN1111 COG0747 # Protein_GI_number: 19704446 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 520 19 538 538 910 90.0 0 MKKKVLLGIFLALISIGVLTACGAKKEKEEVSTEAQATGGHMNITLYWFGETLDPALDWD GWTLTRAAVGETLVTVDENLQLVGQLADSWENVDETTWKFHIRQGVTFQNGNPLTPEAVK ASIERTVKMNERGESALKLASIDVDGEYVVIKTKEPYGAFLANISDPMFIIVDTSVDTSK FKETPVCTGPYMVTSFKPATSFEVVAYENYWGGKPALDSVTVFNIEDDNTRALALQSGDV DMAQGIRAGDIALFTDNKDYIVKTTTGTRIEFLTMNTVKSVLSDKNLRLAVNSAVDYDTI AKVVGGGAVAARAPFPASAPYGYDELNKQTFDLEKAKTLLAEAGYKDTDNDGYVDKDGKN LELNIYGTAGGNTRANSTVAELLESQLKTAGIKANIKIAENLEDIKKNLEFDLLFQNWQT VSTGDSQWFLDNAFKTDGSGNYGKYSNKELDDLINKLATTFDVKERQKITKEASQLIIDE AYGTYIVSQANVNVSNNKVENMYNFPIDYYFLTADTKITK >gi|292606589|gb|ADGG01000021.1| GENE 150 145999 - 146811 1088 270 aa, chain - ## HITS:1 COG:FN1112 KEGG:ns NR:ns ## COG: FN1112 COG1173 # Protein_GI_number: 19704447 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 270 1 270 270 409 92.0 1e-114 MINKKFNYKFSIILTLAIIIIFITVFANYLAPFNPDYQNYEAISQAPNSTYLMGTDYVGR DIFSRILYGGRYSLLIALLVTLLVAFIGIVIGLISGYLGGIVDIVIMRIVDMIMAFPYIV FVIAVVTIFGGGLKNLILAMTLISWTNYARVTRAMVISLKNNDFINQAKLSGASNIRIMY KYLAPNVLPYLIVLTTQDIANNLLTLSSLSLLGIGVQPPTAEWGLMLSEGKKFIQTAPWI LFFPGLAIFICVVVFNLLGDSLRDILDPKK >gi|292606589|gb|ADGG01000021.1| GENE 151 146808 - 147749 758 313 aa, chain - ## HITS:1 COG:FN1113 KEGG:ns NR:ns ## COG: FN1113 COG0601 # Protein_GI_number: 19704448 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 312 1 312 312 517 92.0 1e-146 MIRYTIKRLLYLIPILFGVTFLTFLMLYLAPSDPISMKYSSMATVGDSKYIEEKKEEMGL NDSFIKQYVRWSKNVLSGDFGISTKYNVPVKDEITKRLPKTLALTGTSILITIFLAFPLG IISAKYKNKWIDYIIRFFSFTGISIPSFWLGLMLMYIFSVKFKLLPIVGSKGIKSLILPS VTLSVWLVAVYIRRIRACILEEINKDYVVALESKGISSSKIMLFHILPNSLLTIITMFGM SIGSILGGTTIIETIFEYRGLGKMAADAITNRDYFLMQGYVIWTAIIYVVINLLVDILYK YLNPKIKIGDDSL >gi|292606589|gb|ADGG01000021.1| GENE 152 147943 - 148497 309 184 aa, chain + ## HITS:1 COG:FN1114 KEGG:ns NR:ns ## COG: FN1114 COG3683 # Protein_GI_number: 19704449 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Fusobacterium nucleatum # 7 184 23 196 196 216 75.0 2e-56 MKRIFFILFFIFSFNIFSHPHVFFETALTLKTDNKKMEGVEIQLILDELNTKLNRKVLKP DKDMNVEKGNIVFLKHLYKHIRIKYNNKTYKENDIIFEQAKLEDDSLEIYFFVPIDEKID KNSKLTIALYDTKYYYNYDYDLSSLRMDKSNKNDLKAKVKFFTNDKIKFYFNLVSPDEYE VTFE >gi|292606589|gb|ADGG01000021.1| GENE 153 148741 - 149532 782 263 aa, chain + ## HITS:1 COG:FN1115 KEGG:ns NR:ns ## COG: FN1115 COG2215 # Protein_GI_number: 19704450 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Fusobacterium nucleatum # 20 263 1 244 244 332 89.0 5e-91 MKKIIKYLVGIAAIGLIYLLISNFNLIMYKIAIYQQVIVDKISELTEKENNKVVYTILFF TFLYGVVHSLGPGHGKTLVLTYSVKEKLNFLKLLLVSALIAYLQGLSAYLLVKFIINLSD KASMLLFYDLDNRTRMIASILIILIGLYNIYSILRNKSCEHCHETKVKNILVFSIVLGLC PCPGVMTVLLFLESFGLSENLFLFTLSMSTGIFLVILFFGILANTFKNTLVEDENLRLHK ILALVGAILMILFGIFQILILGE >gi|292606589|gb|ADGG01000021.1| GENE 154 149534 - 149905 388 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782180|ref|ZP_06747506.1| ## NR: gi|294782180|ref|ZP_06747506.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 123 1 123 123 171 100.0 9e-42 MNLTVEKIEEQFNLYLKGEKKLEAIKEWADKYDVYKEELVFSPNENKKELLKWIKIFKNI EIEKTQKSDIEKLYREFLNNFNRNKKEMSFKFKSLGNELDSSTKNSHWDSFSIFLNLIKF FLK >gi|292606589|gb|ADGG01000021.1| GENE 155 149918 - 150529 850 203 aa, chain + ## HITS:1 COG:FN1116 KEGG:ns NR:ns ## COG: FN1116 COG3340 # Protein_GI_number: 19704451 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Fusobacterium nucleatum # 1 203 1 203 203 310 89.0 2e-84 MKNLFLCSYFTGVKDIFKDFMSNDTEEKKVLFIPTANIDEETKFLVDEAKEVFKSLGMEV ENLEISKLDEKTIKNKIEKANYLYIGGGNTFYLLQELKRKNLIDFIKNRVNFGMTYIGES AGAIITSKDIEYNDLMDDKTIAKDLKEYSGLNLVDFYIVPHLNEFPFEESAKQTVEKYKD NLNIIAINNSQAIILKNDKFEIK >gi|292606589|gb|ADGG01000021.1| GENE 156 150649 - 151863 617 404 aa, chain + ## HITS:1 COG:FN1168 KEGG:ns NR:ns ## COG: FN1168 COG0477 # Protein_GI_number: 19704503 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Fusobacterium nucleatum # 1 273 1 273 302 323 78.0 5e-88 MQSKESNIKLLLLGRAVSLFGNTVYLIVLPLYILNITQNLKITGFFFAMVNLPTVVISIF VGTIIEKFNKKNIILICDFLTSILYFILFLYFKNFSSLTFLFLISLIVNIISKFFEIASK VLFSEINTTETLEKYNGLQSFIENTIMIIGPVIGTYLFSIFDFNFILLIVSLAYFLSFLQ ELLIKYEKDSNLVKEDSNFIKDFKEGIIYIKNNKIVLNFFILVMFLNFFIASNDEIINPG ILIQKYEISEKLFGFSATSYGVGSVFAGIFIYYNKKFRFLQKLKLLFILNSLLMCLLGFL SIVLFKYNHYIYFVIFIFFQFLIGMITTFVNVPLISSFQKNVEIKYQSRFFSLLSFFSGG LIPLGVLYAGYLSSYIGADITYIINNVAIIFIVFIVFRKNKKEL >gi|292606589|gb|ADGG01000021.1| GENE 157 152241 - 153323 1245 360 aa, chain - ## HITS:1 COG:FN0402 KEGG:ns NR:ns ## COG: FN0402 COG0582 # Protein_GI_number: 19703744 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Fusobacterium nucleatum # 302 359 1 58 58 63 53.0 5e-10 MRAANGMGTVSKLSGKRRKPWLLRDNKRFNEETGKFERLALGVFETKKEAEIYRIAYFTN NLDMLKKTDIKIHKKKEKSITFEQVYKLWLKDKDVNKGTLSNYETQFKRSKKLHKMEMKE INGILLQDIFYSLDLTNSTLRVLKSFWSMIFDFAILNDMCSKNYAKYLKTKTVEKGNKTS DRERVITQEELQVLWDNISNNETNKHGIIDMVLILCYTGLRISELLRVKRKDVYLNEYYF EVEKSKSKAGIRKVPIADKIVDLFRARYFSKDTFLWQRLDGLEYDYDSFDNHFRILFRDL GLSYHSLHDTRHTFASLLSNNVADKDAIIKIIGHSNYKTTSDVYIHKEIKRLKKVVDEIK >gi|292606589|gb|ADGG01000021.1| GENE 158 153456 - 154490 867 344 aa, chain - ## HITS:1 COG:no KEGG:Smon_1019 NR:ns ## KEGG: Smon_1019 # Name: not_defined # Def: Abi family protein # Organism: S.moniliformis # Pathway: not_defined # 3 331 4 326 332 139 36.0 2e-31 MTIKYDKPFLTYEEQIKKLREDYKLSVGDEEIELELLSTLSYYELINGYKDCFMENNKFI EDRSLIDIFVFNIIDKKFQNILLHYSIYVENIFKTKLAYHIAKNKGIHYSEYLDENKYHT STPDRKAKLLAVIGNFTKVHFNSEDTPTVFYRKRHNHIPPWILFKNVTFNNAIDLYSFLK RNEKLEIISEYFLIDNKNITDDERLELFKNMLIITRKFRNKIAHNYKVIGVNLEKVSLNT SVFKKIDTFGCISNIDIKKKRGRNDIYAMLISVLFLLNTNLLYTLFLKDLAFFTENNLTN PSENLKQLIELYINKLNLPNNFFELFKNIYNLELKKLNEKANKK >gi|292606589|gb|ADGG01000021.1| GENE 159 154695 - 155486 987 263 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782185|ref|ZP_06747511.1| ## NR: gi|294782185|ref|ZP_06747511.1| hypothetical protein HMPREF0400_00152 [Fusobacterium sp. 1_1_41FAA] # 1 263 4 266 266 483 100.0 1e-135 MNLNNLISKITIQDLTPAQKRSCLLSWVALNLKLRLKDYDVNKGPTAYSTRLWAGGRGEP GSRNYMKNLIKENIILNIAGAESKEEVYEILQEMADGIIEESLIICEELFAEARQARTQK VRDKYFKAMDNLQYLRVAFIVATSNYANSLINSGVDIDHTLLTIRLGAAQTYKKELNRIW KEYANGDKEQEDLDNANQKTEQIFNQFEKEYIITDKALDQLAEEKLLYNLAGERNIEQLV DIIVDEIRERITYKVRLIPVTKF >gi|292606589|gb|ADGG01000021.1| GENE 160 155473 - 155976 561 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782186|ref|ZP_06747512.1| ## NR: gi|294782186|ref|ZP_06747512.1| DNA-binding protein [Fusobacterium sp. 1_1_41FAA] # 1 167 1 167 167 239 100.0 3e-62 MDIANILKIIRKKYKLTQKEIAKIIGVSHQTISLIERGDYKASKKTVNSLIKNFTLEFKE KTYSKKEITEFEKEVLETYEMLREEKNPFSAIASFKRSLINLNQEISKTSININTLEENP EFKKISIRLKRPIKTTLKYLDLIKNQLIDILNDDYIILEEDDFNESE >gi|292606589|gb|ADGG01000021.1| GENE 161 156082 - 156615 561 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782187|ref|ZP_06747513.1| ## NR: gi|294782187|ref|ZP_06747513.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 177 1 177 177 263 100.0 5e-69 MKELYCYYDEVFKDYLSDGVFLHKCYIIENISINKESKNINKKKIAFFIKSKEEIEINFN ISRNDVPYIRGFYDELQTCENFNKKHLNPFYNYWLSNLKKTSKEEVDMKLSQIGRDYNII FLTSLEEIKEIKKIYVEYKEKSKKEENVTFSEIAESVSILLEKIISGINEILNEISE >gi|292606589|gb|ADGG01000021.1| GENE 162 156698 - 157096 253 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782188|ref|ZP_06747514.1| ## NR: gi|294782188|ref|ZP_06747514.1| toxin-antitoxin system toxin component [Fusobacterium sp. 1_1_41FAA] # 1 132 1 132 132 235 100.0 9e-61 MTLKHVIDTAQKLLEEYGNIYNLIKDKGIILKYVDLDSSIRGLSIDNIIFINSNISNFDK EFVIAHEIGHYIFHDDSIRQFSKIEAFKGSREETQANLFATIFLQAKYKDCDNNDEIQKI INYVWCNYLNFK >gi|292606589|gb|ADGG01000021.1| GENE 163 157103 - 157498 629 131 aa, chain - ## HITS:1 COG:no KEGG:Sterm_3926 NR:ns ## KEGG: Sterm_3926 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.termitidis # Pathway: not_defined # 1 131 1 126 127 71 41.0 1e-11 MDMYDRIRNRRKELGMTQDELARLTGYNDRSSIAKIEAKKADLSQSKIIAFAEALKVTTS YLMDGDGKEKIIKKEENNIFSQLTEDELAKLEKFKNMSTVMFMNEGNDISDKDKETLAIA YAEVLISQRKK >gi|292606589|gb|ADGG01000021.1| GENE 164 157663 - 157881 197 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782190|ref|ZP_06747516.1| ## NR: gi|294782190|ref|ZP_06747516.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 72 4 75 75 114 98.0 2e-24 MTDTKLLKEKIDNSGYRFNWIAKNLNLTPYGLRKKVNGETEFKATEIVKFQEILKISNTE RDKIFLSNLLKK >gi|292606589|gb|ADGG01000021.1| GENE 165 158322 - 158507 196 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782191|ref|ZP_06747517.1| ## NR: gi|294782191|ref|ZP_06747517.1| hypothetical protein HMPREF0400_00158 [Fusobacterium sp. 1_1_41FAA] # 1 61 1 61 61 92 100.0 6e-18 MERHSFEIQRKDGKPIKILMDEKELNGVIEVEISSINSGERAKDSITITFIDIESLKITN L >gi|292606589|gb|ADGG01000021.1| GENE 166 158497 - 159078 677 193 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0826 NR:ns ## KEGG: Sterm_0826 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 14 187 15 194 197 85 31.0 9e-16 MSFDFDKINDDAFKRLSDTFSLERAGKIINNEIFAFFCSNKYPSSIQTIDFKDIFENDIL IHNETGKRCIIVDVKPLRRAVIAKYETETQRAREQQKINNISIGSISGSAIIGNQQFAII DNSSISNLKEIISNKVQDKELLEKLLNRIEIIIEDNQPISKGTFSKFADIFRKYPDVFNA VGAIITKWISSTN >gi|292606589|gb|ADGG01000021.1| GENE 167 159132 - 159365 385 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782193|ref|ZP_06747519.1| ## NR: gi|294782193|ref|ZP_06747519.1| hypothetical protein HMPREF0400_00160 [Fusobacterium sp. 1_1_41FAA] # 1 77 1 77 77 134 100.0 1e-30 MQDLYFKNHEARLIFGLVILSKKMQMDFLGIDYNHYSDKKIAEIWYTNIKDILAVSKHEM RDVALDNLEKLYSGMKH >gi|292606589|gb|ADGG01000021.1| GENE 168 159378 - 159506 99 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGVHRNEFLRLIKIIPFPATAKLKDVVAIMEAYQKMEGNNEK >gi|292606589|gb|ADGG01000021.1| GENE 169 159625 - 159948 500 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782194|ref|ZP_06747520.1| ## NR: gi|294782194|ref|ZP_06747520.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 107 1 107 107 200 100.0 3e-50 MAKFEIMKEGNFKGCKYVITHTDDGLYNWYCGYVEVPKNHIYYEQHYDDINDIDCHGGLT YSGYRFENGIYYIGFDTAHFDSEPANNLTFVENECLNIIEQLIKLNN >gi|292606589|gb|ADGG01000021.1| GENE 170 159961 - 160209 401 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782195|ref|ZP_06747521.1| ## NR: gi|294782195|ref|ZP_06747521.1| hypothetical protein HMPREF0400_00162 [Fusobacterium sp. 1_1_41FAA] # 1 82 1 82 82 156 100.0 5e-37 MANYKITVDEAVALSGGELNKDDVYSLIRANEVPGCIYKKKNEENERGAYLIIKAHWLNF LAGKSYKKEKTSATPDQSCTDV >gi|292606589|gb|ADGG01000021.1| GENE 171 160284 - 160469 388 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782196|ref|ZP_06747522.1| ## NR: gi|294782196|ref|ZP_06747522.1| hypothetical protein HMPREF0400_00163 [Fusobacterium sp. 1_1_41FAA] # 1 61 1 61 61 92 100.0 1e-17 MFSLPKKKEIKVSGRTTEVIRVRNSTLEYVDEMVEESGLSRQEIIDRAVRYAYDNLEWEE E >gi|292606589|gb|ADGG01000021.1| GENE 172 160469 - 160717 403 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782197|ref|ZP_06747523.1| ## NR: gi|294782197|ref|ZP_06747523.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 82 6 87 87 130 100.0 3e-29 MKLYEITSEMRALDELFLSCIDEETGEVRDDGVIDILEQELKLQLQTKGAGIIKSFKNSE AMLNGVDEEIKRLQALKKSISN >gi|292606589|gb|ADGG01000021.1| GENE 173 160751 - 160975 322 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291461175|ref|ZP_06027378.2| ## NR: gi|291461175|ref|ZP_06027378.2| hypothetical protein FUSPEROL_02051 [Fusobacterium periodonticum ATCC 33693] # 1 74 100 173 173 101 100.0 1e-20 MEMMGITKIETELGNLSLRKSKSVNIYDESLIDKKFIEIETKEKISKTEIKKAIEAGENV QGANIVEKNSLNIK >gi|292606589|gb|ADGG01000021.1| GENE 174 160987 - 161640 950 217 aa, chain + ## HITS:1 COG:no KEGG:BB3533 NR:ns ## KEGG: BB3533 # Name: not_defined # Def: hypothetical protein # Organism: B.bronchiseptica # Pathway: not_defined # 1 216 1 210 216 202 47.0 7e-51 MANMIMVLGESGTGKSTSIENLNEKETFIIQAVDKPLPFKEFKKRYSLRSKENPKGNRFI SDRPEVIMKILSTLDKEKEIKNIIIDDSQYIMANEFMRRAKEKGYEKFTEIGQNFYNLVD KANSMREDINVIFLQHIEVTDDGRKKAKTIGKLIDDKVGLEGRFTIVLATEIEDGVYYFR TQNNGNDTCKSPKGMFDELRIPNDLNYVIQKSNEYFN >gi|292606589|gb|ADGG01000021.1| GENE 175 161659 - 162246 820 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782200|ref|ZP_06747526.1| ## NR: gi|294782200|ref|ZP_06747526.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 195 1 195 195 327 100.0 4e-88 MMNLWTENEEDLREETKEGSKTVNKSGVYNCTIEEALIISGKNGSQSQGLKLVLKTDEEQ YFYPVEFFRKADGTENEYARKKLNKLTYLCKLKNKDLVPIESPNKVFIPALADKKIGVIV EVSLNGDFLRYNIIGYYDIQSKKTADEIQNKKNPEIYERFRKKFESAAPIEKPSNNHTEE KTEEKNEDLPEEFPF >gi|292606589|gb|ADGG01000021.1| GENE 176 162259 - 164541 2041 760 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3911 NR:ns ## KEGG: Sterm_3911 # Name: not_defined # Def: toprim domain protein # Organism: S.termitidis # Pathway: not_defined # 7 254 18 276 607 80 29.0 2e-13 MKIKHYGDEARLDYCPVCQKTKKNPCFSVNVNTGKYMCHSTGKSGHISEFPELQKELNIS EIEEKIEEKPILDFSSLILNSKKLNKKWLDYLKSRGIENENNINKLYRMGTHESMIIPVT NGETVVGIKYRSLDKKLWSEKGSCLDYLLNWQNITDFDYLVIVEGEIDLLSALEAGVENT VSLPSGATNIKCIKMQKNWLSKFQKIIIATDDDEAGVEARKRIVHELRDLLIPLYKTYFY KKKDVNEVLVKNGKDKVYKYLLESCSQIKTGFRNFKIDDGGYNYYGGEETVRVSNFLVEV EAFSENFLIGKAINNGRERKFKARISDLLSIKGIAEAMGVYLASPSTIPKFIDWLKEENQ EKYIEEIEYYGIRNDKYYDEDSDVVCDKRDLKITKISEIGALTTEDKEWLEKNLIHMRSD VNQSLLGICWALGRFHTQGTYPILEVSGTTSIGKTEYVEFISRILFGGRENIKSLSTLSN HQIRSFSSCSNITPWAIDEVKITGKFQLEKMNDLYSTIRSVYDNKIINQGNTTNKLAEFH LCTPLIISGETKLSDVSIQNRMISTSLTKKNKGDFEIYKKLKNTDILEKLGKTALMDRLE NGVIATDSTILDKVKDERQLYNLNCLLKGLKALSRVLKIDMKIISNFVSFLNTDFSKEYT TTDNFIELLKLVEDAGIENLESFYVSTPNEHWARFQLLYTAIDEQKRKTNSTLELLDMKT LRKQLIEEEFIVSNSEVKKIKDSFTGEPKTYKIAKFKIIK >gi|292606589|gb|ADGG01000021.1| GENE 177 164943 - 165116 127 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782202|ref|ZP_06747528.1| ## NR: gi|294782202|ref|ZP_06747528.1| hypothetical protein HMPREF0400_00169 [Fusobacterium sp. 1_1_41FAA] # 1 57 1 57 57 81 100.0 2e-14 MQIIEFYYMCLFAETSSELLSLVKKHKWYFNKLKPEAQEQLRRLYKIYRKNEEALYK >gi|292606589|gb|ADGG01000021.1| GENE 178 165130 - 165828 911 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782203|ref|ZP_06747529.1| ## NR: gi|294782203|ref|ZP_06747529.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 232 13 244 244 326 100.0 7e-88 MNELINKNEMTSLELLEQINLFRQEEYKIKKETRTLTEAEIKRESYVELRHDTLLDIIRD EFEEEISLQKILESTYKNDRGKEYPLFILTLNQAKQVLLRESKYVRRATIQYIEKLEQFI KELPEKEKTLKGFEKTVEAIANVYGCKKDFKTIPLKDLIQLKKIIEKNFKEEKPQEILKD LAQDIYCIFKVDSKETPTLPFEEILRLIEKYIEIRPMNLYKVEVKEKLFLLE >gi|292606589|gb|ADGG01000021.1| GENE 179 165833 - 166627 833 264 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782204|ref|ZP_06747530.1| ## NR: gi|294782204|ref|ZP_06747530.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 264 1 264 264 480 100.0 1e-134 MGKKIDVNEIVDKRFKNKNDEEFYVIKYLFKEKTNYCYDIEFIETKNIQMATLNQIRKGT CIDIVQRKKMKRIQTELKLKERNRLVKQPRNQVHIPSNINQINVLSIDLASRSVGIAYSC KGKIVRWKTIKADLEDFRERGYLIVNEIVNVLETSKKIKGATIDLVVIEDVYLGLNSSIL SILSEIRGMLTYNLKKLNIGLLLVPAVFWKNKFDNLPLERKEQKEFMMNKFNEFTGKIAD SDDVADAYMMLKACLGGIDAEYKN >gi|292606589|gb|ADGG01000021.1| GENE 180 166608 - 166790 254 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782205|ref|ZP_06747531.1| ## NR: gi|294782205|ref|ZP_06747531.1| hypothetical protein HMPREF0400_00172 [Fusobacterium sp. 1_1_41FAA] # 1 60 1 60 60 97 100.0 3e-19 MLNIKINKDGVFFEQNGEVVRIEDKTVDELTKNLVSYICARDNVNFKIYGNILAVEEDKK >gi|292606589|gb|ADGG01000021.1| GENE 181 166861 - 167334 600 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782206|ref|ZP_06747532.1| ## NR: gi|294782206|ref|ZP_06747532.1| dynein heavy chain 2 [Fusobacterium sp. 1_1_41FAA] # 1 157 4 160 160 277 100.0 2e-73 MRKIRVTHKDGDMQGITLMYLINKYLKINRELWDKEGMVLNRYYKAILTRTIKASDKIVD KFKKNINYNAEKEILKVLDEVFVACEHKENGDNLELLRTMFLVIMMLGTINFHKKKMIGV VLKSMITDVFNVFEDFKTMWLKEIDDSVVRLEEAGAC >gi|292606589|gb|ADGG01000021.1| GENE 182 167324 - 167605 252 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782207|ref|ZP_06747533.1| ## NR: gi|294782207|ref|ZP_06747533.1| hypothetical protein HMPREF0400_00174 [Fusobacterium sp. 1_1_41FAA] # 1 93 1 93 93 169 100.0 5e-41 MHADDKELFDALVLAIGSRRDPMRKFKGIYFYINNSRVEKTQDYGNDLDNERYDLGNYFL FSDEATKVLESKEYQNFWEKVRNGEIGGENVGV >gi|292606589|gb|ADGG01000021.1| GENE 183 167592 - 167804 377 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782208|ref|ZP_06747534.1| ## NR: gi|294782208|ref|ZP_06747534.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 70 8 77 77 117 100.0 2e-25 MWVCKECGEKIQGYYVGYVDIDKKGCAIDGTQEEEELIRYTCACCRIIKFGDIKELKRVA DWVDDEDVER >gi|292606589|gb|ADGG01000021.1| GENE 184 167791 - 167991 237 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782209|ref|ZP_06747535.1| ## NR: gi|294782209|ref|ZP_06747535.1| hypothetical protein HMPREF0400_00176 [Fusobacterium sp. 1_1_41FAA] # 1 66 4 69 69 103 100.0 5e-21 MWRDKQSKKIVYLQKVEFCVTDKNGNIKKVFREEKFYNCESWLYGKEMTLDELKRIAYWE EEDERD >gi|292606589|gb|ADGG01000021.1| GENE 185 168135 - 168365 240 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782210|ref|ZP_06747536.1| ## NR: gi|294782210|ref|ZP_06747536.1| phage protein [Fusobacterium sp. 1_1_41FAA] # 1 76 15 90 90 120 100.0 4e-26 MQYTGLKDKNNKEIYEGDIIKFLNGIFEVIWCNEKASFMLKNKEYKEFLNFIYENNNGME IVGNIYQNLELYEEVR >gi|292606589|gb|ADGG01000021.1| GENE 186 168365 - 168805 521 146 aa, chain + ## HITS:1 COG:no KEGG:DSY2187 NR:ns ## KEGG: DSY2187 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 6 136 33 166 175 62 28.0 7e-09 MATQEQRIVLKEIEDVLYSYPKYKNRIKEETEHLANPQLKKCCGVGGQGGNGYEIKSEYE QLEELKQRISNNISRYREMIFRIEECLSMVKDNKDFKFIELKYFQGLTYEEIAEKLEVHV TSTYKMRNRILGALKVHFKAQRLIEF >gi|292606589|gb|ADGG01000021.1| GENE 187 168982 - 169530 404 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782212|ref|ZP_06747538.1| ## NR: gi|294782212|ref|ZP_06747538.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 182 1 182 182 328 100.0 7e-89 MVHRANTLARRDGLSLVKIQYARHLDVNTLTVLKCTGYVPMWEYFLLYIIFLSFQFTLYI FIFFSKRYNKRKIKIGDGSMKYLLYPDITEDYKEKVIACVLVKSLEDYTPIEKDRVKEEL IKKNKGLSDKLTEVIFVTREGKVAGNFYYVNKKMDDIILKFTTDIEVKKKLAKDIEENGE VI >gi|292606589|gb|ADGG01000021.1| GENE 188 169587 - 170027 567 146 aa, chain + ## HITS:1 COG:SA1820 KEGG:ns NR:ns ## COG: SA1820 COG3728 # Protein_GI_number: 15927588 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Staphylococcus aureus N315 # 2 146 3 161 189 79 35.0 3e-15 MKLNARQKSFCEYYVASGNATDAAIKAGYKEKYAGVNADKLLKNTNIQKYIDELMQKLES ERIASAEEVLQNLTAMMRGEIQEEVIVVEGEGDGVSSARIMKKQVSAKERIKAAELLGKR HALFTDKTKIEGTLPVMIVGEDDLDE >gi|292606589|gb|ADGG01000021.1| GENE 189 170020 - 170478 140 152 aa, chain + ## HITS:1 COG:SPy0972 KEGG:ns NR:ns ## COG: SPy0972 COG1783 # Protein_GI_number: 15674984 # Func_class: R General function prediction only # Function: Phage terminase large subunit # Organism: Streptococcus pyogenes M1 GAS # 2 146 4 148 429 144 50.0 6e-35 MSKFIKISLPQIVGKGYKSFWNFKGRYKVVKGSRASKKSKTTALWIIYNMMKYKNANTLV VRKVFRTLKDSCYSDLRWAINRFQVQDYWELKESPLEMTYKPTGQKILFRGFDDPLKITS ISVSVGSLCWCWINISVQHVNQNLFNCWNTLT >gi|292606589|gb|ADGG01000021.1| GENE 190 170569 - 171105 636 178 aa, chain + ## HITS:1 COG:no KEGG:GFO_2427 NR:ns ## KEGG: GFO_2427 # Name: not_defined # Def: HNH endonuclease family protein # Organism: G.forsetii # Pathway: not_defined # 1 177 134 312 312 97 39.0 2e-19 MDKEIWKDIEGFEGFYQVSNLGRIKSLGGWCGSSKRKEKIRTLNHTKDGYLKVRLMYQGK DITCRVHRLVAKAFIPNPNNFETVNHKDGNKENNKVENLEWCDRDYQMEHAYKMRLKTSQ KGSDNSNSKLTDDDIKYIRKVYKKYSKDFNTISLAKQFNVTNRVIGLIVRNKSYKNVK >gi|292606589|gb|ADGG01000021.1| GENE 191 171323 - 172159 1034 278 aa, chain + ## HITS:1 COG:SPy0972 KEGG:ns NR:ns ## COG: SPy0972 COG1783 # Protein_GI_number: 15674984 # Func_class: R General function prediction only # Function: Phage terminase large subunit # Organism: Streptococcus pyogenes M1 GAS # 4 265 152 415 429 228 43.0 7e-60 MLDESIRGIVEEPLFKQIIISFNPWNERHWLKGRFFDKVDDNILALTTNYQCNEWLDDAD KKLFEDMKKNNPRRYQVAGLGNWGIVDGLVYENWQELEFDWREILNKRQKAKAVFGLDFG YTNDPAAFFCGILDQEQKEIYVFDEIYQKGMQNTAIYNNIEKLGFKKEIIVADSAEPKSI DHLKGLGLYRIKASKKGKDSINAGIQFIQDFKIFIHPRCVNFLTEISNYAWDKDKFGKAV NKPIDDFNHLMDAMRYALEDYMRNNSVRTIDRNVLGIR >gi|292606589|gb|ADGG01000021.1| GENE 192 172173 - 173486 1640 437 aa, chain + ## HITS:1 COG:no KEGG:Bcer98_2946 NR:ns ## KEGG: Bcer98_2946 # Name: not_defined # Def: SPP1 family phage portal protein # Organism: B.cereus_NVH # Pathway: not_defined # 21 407 24 412 451 285 41.0 3e-75 MTVEDLKEALEAFIKNELPELQKMEDYYSGKHNILNKKDRSDKKKDTKLINNYPEYVTTI ATAYFLGKPIAYALQDDKLKKDFEELSEYLATEEEQQENFEHSQNCSIFGKSYELWYKNL DNTIGNVVVDPRDCFILRDNTVKKGIIAAVRWDKTKNKEDKWVYTLEVYDSTSVTTYEFL SDTDKKEVPTVTGETKLHGFNQVPIIEFLNNKRANGDFKSVISLIDGYNEATSTAIDDMK DFTDAYLVLVNMGGTTDEEIERMNKNKVMLINEQGDAKWLVKQVNDNYAQNNKNRLNQDI HKFSMIPDMQDKEFSGNSSGVALGYKLLALEQLAAQKEMYFKKAINQRLELMIDFHNLKI KSTDIQKVFTRNIPKNLVEAADTAQKLQGIVSHETILSTLPFIEDAKGELEKIKAEEDIN AMKDMNTPFGVGADGKE >gi|292606589|gb|ADGG01000021.1| GENE 193 173473 - 174999 1641 508 aa, chain + ## HITS:1 COG:BH3531 KEGG:ns NR:ns ## COG: BH3531 COG5585 # Protein_GI_number: 15616093 # Func_class: T Signal transduction mechanisms # Function: NAD+--asparagine ADP-ribosyltransferase # Organism: Bacillus halodurans # 3 306 5 300 490 123 27.0 1e-27 MAKNRAYWEERQIKREAKAFTTIQDVEKEYQIALSKAKQDIIKEISRITTTYMNDNILNY NEALKHLKGDDYKVWKKDLHDYMKEYNKLLKNAPLQAQKLYLEIETLSAKSRISRLDSLK TQIDMELTKLIFGVEDNAKNTLTSVYRDTYTEVTKDLGINTIVSRDKIKAVLDRPWSGAN FSERLWSNTDKLAQTVKQEIVNGMIQGINLQIMTKRVSERFETAKKNDVERLLRTEVNYT LNQATLASYIEAGIEKYEFSATLDSRTSQICSELHGNIFEIKNIAVGLNYPPMHPRCRST TIPIIDYDKLIKEGKEELEKNNYNLDENNWEGIKDYGTLKANDLKEREDIEDEEYKKRIG DFYFLKKVDKIDYNIAKEIFAEYEPNMVNLKYENAIVIKADGSVYIVFGGENFVNTTVVG DLTGAYITHNHPKKYTDFTFSNQDVSSFINDKLAYLRGVDYKYEYEMSLSIFSTDILPDK PFIEENFHHSNIILRSNEYNLRYRRRER >gi|292606589|gb|ADGG01000021.1| GENE 194 174996 - 175247 312 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782218|ref|ZP_06747544.1| ## NR: gi|294782218|ref|ZP_06747544.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 83 1 83 83 112 100.0 6e-24 MTKLEEAQKIVWEIYKKYCLECKKLETPYEAGLDGFKNYKQKKELTSKMLSDVNNVKEKY NIENLEISAKDLYEFEKKLFETK >gi|292606589|gb|ADGG01000021.1| GENE 195 175627 - 176202 969 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256027861|ref|ZP_05441695.1| ## NR: gi|256027861|ref|ZP_05441695.1| hypothetical protein PrD11_07666 [Fusobacterium sp. D11] # 1 156 1 156 201 189 89.0 9e-47 MKTFKINIQQFAEPEETKTYTQEEVDKMIDKRFARMKADFEKEKKELERKHNESIEDYEE RIKNANLTAEEKHKKELEKIQKDLDAKNAELTKIKTDEIKRTTLAKYKMPDKFLDRISGA NEEEIEASVKGFAEVMGEYVKGLGASGVPGAMNGGSEDKKYTKDDFSKMTLSERTELFNT NKKLYDELKGE >gi|292606589|gb|ADGG01000021.1| GENE 196 176206 - 177054 1310 282 aa, chain + ## HITS:1 COG:no KEGG:spyM18_1772 NR:ns ## KEGG: spyM18_1772 # Name: not_defined # Def: putative major head protein # Organism: S.pyogenes_M18 # Pathway: not_defined # 3 273 4 267 272 167 37.0 5e-40 MAGETKVEHLIIPEVLEDMVRQELPHKLVFGPLVDINNKLEGVPGNVLTIPKWGLLGIAE DVAELGAVPYENLTTSKTEVTIKKIAKGVHFSDEALLSGYGDPLGEGVSQLTVSIARKID SDVLDEIKKAKLKYNRKSVKLSYDVLADALTKFGEKIDNPRVIFITPDQYAELRKDKNFL ALKDIAGKPLMMTGVIGELCGIQLVVTSNPALVKANEVTNPIIEAGAIGLLLKRSPQVEK ARDIDHKATKVNIDQHYGLYIKNDSKILLLTTKKPEITVSEA >gi|292606589|gb|ADGG01000021.1| GENE 197 177114 - 177443 402 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782222|ref|ZP_06747548.1| ## NR: gi|294782222|ref|ZP_06747548.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 109 1 109 109 176 100.0 3e-43 MEEIYNKIVEKVKELRTISNEAKLKIQVTILVRKSLNFMNRDDFPVELIEPFAEHLALKT IEETNLQGNISKVTEGDTTIEYDTSNNTTDEMFVSLKSQLFRFRKVGTI >gi|292606589|gb|ADGG01000021.1| GENE 198 177440 - 177805 430 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782223|ref|ZP_06747549.1| ## NR: gi|294782223|ref|ZP_06747549.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 121 1 121 121 241 100.0 1e-62 MSILDKLHNDRVTVIRSVTITDEYGGAFEEQREILSNIPCRLSQKWLRSVTPGPVNSSGQ EYKLFVGLDVDIKQNDLLKVIRKADGAIYMFKASKPLAYNIIKHKEITLTEVSENEVDYG A >gi|292606589|gb|ADGG01000021.1| GENE 199 177795 - 178175 595 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782224|ref|ZP_06747550.1| ## NR: gi|294782224|ref|ZP_06747550.1| phage protein, HK97 gp10 family [Fusobacterium sp. 1_1_41FAA] # 1 126 1 126 126 217 100.0 2e-55 MELKGFKEFDKILIEIKEKAPQATEKFLMLQAEELKKDAKELTPVDTGTLKNAWQRENGK RLTGKKFSQIVFNMTDYAAHVEYGHRAGRSKTKFVRGRFMLRTAVAMRQIKFYKDLKNFY GGLIKK >gi|292606589|gb|ADGG01000021.1| GENE 200 178172 - 178621 535 149 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782225|ref|ZP_06747551.1| ## NR: gi|294782225|ref|ZP_06747551.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 149 1 149 149 264 100.0 1e-69 MKWIDIRNALNNIISEKLKVIPYSEDIDNIKKPCFYIDLVSYKKEFNSEYRELKTIDVDI IYYPKTNGKLTNAEILENLENLDDALEIEGKKVLHVLDRYLTLRNTDITIVDRVGHYVFT LSLYDLYGKPYDYELMKDLKLRFKEGGSN >gi|292606589|gb|ADGG01000021.1| GENE 201 178621 - 179700 1449 359 aa, chain + ## HITS:1 COG:no KEGG:Amet_2420 NR:ns ## KEGG: Amet_2420 # Name: not_defined # Def: phage-like element pbsx protein XkdK # Organism: A.metalliredigens # Pathway: not_defined # 12 359 4 351 351 160 32.0 5e-38 MGNEVGQIKASPNINIEFKTLATTAIQRSERGIVCLILKDTKKTIKWNILKTIADLKDDE WDAKNVKYIKLAMHYGAKKILIRVLQTGENLDDVLGEFKERKMHWLAYPGAEETDDQKLV IWTKQVFGNDGAIGKTVKYVSSFADNTDHVAIVELGNTGTYKSIYGEFTAQEYTAAIAGL IAGMPLNRSADNFVMSDLKEVDYYEPKLGKFSLYNDDEKVRVNYGVNSKTTFDSTWKKDT RKIKIVEGMCFITDDIRDTFKNYWLGIYINDYNNKMNFCSNVTKVYFKEMAPNVLSGDYD NKIEIDLEAQKRLIVLDGKDPEEMTEMEILKYPSGDDVFLTGDVRFADTMSNLSILIKM >gi|292606589|gb|ADGG01000021.1| GENE 202 179713 - 180153 732 146 aa, chain + ## HITS:1 COG:no KEGG:Amet_2421 NR:ns ## KEGG: Amet_2421 # Name: not_defined # Def: phage-like element pbsx protein XkdM # Organism: A.metalliredigens # Pathway: not_defined # 1 139 1 140 147 79 34.0 4e-14 MADTNIRGYHTIAGAHGTLWIDNEKIAEFTKVNAKVTADRKDVQLGLSVDSKIVALKGEG SVTLEKVYSRGKKILEKLVKGRDVRVRIVTNLADPDTPGKQEERISLDNVWFNSIDLINI ARGEVVEEEYPFGFTPEDLKYENNIK >gi|292606589|gb|ADGG01000021.1| GENE 203 180163 - 180540 536 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782228|ref|ZP_06747554.1| ## NR: gi|294782228|ref|ZP_06747554.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 125 1 125 125 158 100.0 1e-37 MLATIEDLLKAGKEREKKKKFKVLVKELDREIECETISRKDYLDIILENKKDSDVEVIYN SCSIFRDDKLIDELKCNMNPTDVVEKILSFSTIYSLAKTILEKSDISQAGTISKFISVID DDIKN >gi|292606589|gb|ADGG01000021.1| GENE 204 180727 - 180882 179 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIGLIIIILIIVYAGKYYRWTERLGYFKSMGITALVVFSVVGLAIIVGNAN >gi|292606589|gb|ADGG01000021.1| GENE 205 181164 - 181883 660 239 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782231|ref|ZP_06747557.1| ## NR: gi|294782231|ref|ZP_06747557.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 239 1 239 239 385 100.0 1e-105 MKKVLLALMLLFSVISFGLDDSQKIEIAELMIFNTKNTNGDGLNLDVKKAFKDLVIKKDD FEKIIMEKNKNETKTDILTFTIIKPISNKKTFPLGYNMRIGYYSKELLGFKKIIIATDNK TYEKNFNYLDGIRDISSSGVYEYYDIKISLDDKETINMLKDIVKSKSSKIRFYSREKHKD KVFTDREKKLILNFLAITGFYHVANSNIIEDTVQEIQNKFNIPEDSAFQYLKDIYKKNK >gi|292606589|gb|ADGG01000021.1| GENE 206 181928 - 182107 203 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782232|ref|ZP_06747558.1| ## NR: gi|294782232|ref|ZP_06747558.1| hypothetical protein HMPREF0400_00199 [Fusobacterium sp. 1_1_41FAA] # 1 50 1 50 59 85 100.0 8e-16 MKDKTLKGIGVFITDPQGKNIGYIMVNEKLEVIDNLKNGYHIKRGLNNEWKIKAKKQKK >gi|292606589|gb|ADGG01000021.1| GENE 207 182070 - 182213 96 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGKSKQKNRKNKRYQRKLYKKALFHLYKLKDEIVQELKNMEIKVKL >gi|292606589|gb|ADGG01000021.1| GENE 208 182303 - 182950 582 215 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782233|ref|ZP_06747559.1| ## NR: gi|294782233|ref|ZP_06747559.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 215 1 215 215 372 100.0 1e-102 MFLTFIIFTGIAVFAVLMYQDYLKEKEEIKQYGNFLKGTNVTLDEFIEERDKMDKKFSEN DVLWAIYNKRLLNSFFKKEFWMYRVTLYDMLKLLHKEKNNREELRYCLKILYYDLSGADK KTPKKLLMIVPDLYKRIIKLKKYFTENMIDDCFKIKFPFHYCNKEIFSNIVNDIFLEENL TIILDKYLDKMKKEPKKAQPIDYNDIINGTWEDDD >gi|292606589|gb|ADGG01000021.1| GENE 209 183056 - 183229 173 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782234|ref|ZP_06747560.1| ## NR: gi|294782234|ref|ZP_06747560.1| hypothetical protein HMPREF0400_00201 [Fusobacterium sp. 1_1_41FAA] # 1 57 1 57 57 79 100.0 1e-13 MDDKKKIGRPKSLKPKSIKLTVRVDEETNKILEDYCNRKNKTIVEGVRDGINYLKEK >gi|292606589|gb|ADGG01000021.1| GENE 210 183356 - 183559 362 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782235|ref|ZP_06747561.1| ## NR: gi|294782235|ref|ZP_06747561.1| hypothetical protein HMPREF0400_00202 [Fusobacterium sp. 1_1_41FAA] # 1 67 6 72 72 117 100.0 3e-25 MYANMEKVIKESRKHLTTYYDMTFDQLNDIRDNSKGIFEMIHKAFTFGFGQGIKCQKKRG KVNKNGK >gi|292606589|gb|ADGG01000021.1| GENE 211 183549 - 184301 970 250 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0837 NR:ns ## KEGG: Sterm_0837 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 3 139 2 132 209 105 46.0 2e-21 MENKLVKINDVELGIKEYKKERVVTAWDIAKVHKREVKTINQSFKLVKDKMIENEDYFII EKSEKLRSENLTLKNLWDNAPAAKEIILFSESGYLMLVKTFTDDLSWDIQRQLVKGYFKL KELKSSIDKDKRLEIMEKNANVRMAKMLKSLIPFSKSERYKDILVSEATKVLTGRELIPP PEVEAKTITATQIAEILGVSVQKIGIISNKYNLKTEQNGYWVHEKAKYCNKEVPNFRYFE SAIEEFKKYI >gi|292606589|gb|ADGG01000021.1| GENE 212 184353 - 186287 2440 644 aa, chain + ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 105 448 227 595 696 120 25.0 9e-27 MEHVLSATLELKDKFTSKIKSASKELGAFTKNTTHVKGAVKETADCIRNSLGTLNKLTIG FGAFKGIMAGFDFIKDVYTGYAKLDAAITRNRGIMRASIEDTAKLKSQVLELGKTMPFTA QEVAEAQYYQAMAGMKTNEVLEMTPKLLKMSIASGQDLASTSDILTDNISAFGLALEDAD RLMDVMVATANNANTDIAGLGEAYKYVASTSRSFESMEEVNILLGTLANNGIKSGQAGRN LAAVYTRLAKSTPDIDKALKVMNLKLYDSQGKFKGLRKIVEEMRPILARMTDEQRNYILT TIFGSEQMRIITSLLGTSKEGFDTLANSIYNSKGATEEFNKLQENTPEYKIKALASAWDN LKLHIGEAAAPAITSLIENLTGKIIELTESDTFSKENVQAFFDTVISYLNTTIDLVSDLA TLLEPVIWGLKVVGKTAEVGGNIGSYLTTGKSTNQNKLESEIIAIDNKIMEMNPQTVEEE EKRKKLFFENEKRKKEYWDEYGKTIDKRAEAGNPHAKKDFIFKPVSYDSEELASIYDERY KYRKPKKDKNLDEKTTQIIDSKSIANGYKYVIKPPERQKSDLEKVSEKLGYKAPVSPLST TFSPQVNVNMGGVTIKNEADLETLSEMTKRKIKEEMLNYVQTTK >gi|292606589|gb|ADGG01000021.1| GENE 213 186301 - 186747 257 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782238|ref|ZP_06747564.1| ## NR: gi|294782238|ref|ZP_06747564.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 148 1 148 148 259 100.0 3e-68 MKPTFILLKNSTNTPFFFVVPPLDLKIESEQDTQIFKIIDVGEKILIGNRKAERISFSTF FPNLKSPFFNYLLSATPSGCVETLTKLKNDKEPLTLIVPEFNIFFKCYIQTLNFSIIERT GDIDVEISLIEFTKNKTLLDVVRGLLQR >gi|292606589|gb|ADGG01000021.1| GENE 214 186752 - 187810 1298 352 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_10013 NR:ns ## KEGG: EUBELI_10013 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 22 311 3 300 301 127 29.0 8e-28 MEKVKIYVNGKEYKNIFIQVIWSGAIHGTARKLEVEYLGDIITEIGDEIEFSYDDEKLFV GKVFFHSRKGDTDVKTFYAYDNSIYLNKNNFVKNFFRKKPSEILKEICGELNLKVGKIPQ DEVTCTYPAIDRSGYEIILNAYTIQHRKNKKIYSIVSNDKAIDIVEQGTHADVLLTSADN ISTSSYEESIENMINQIVIYKVENEKQQILNKVENAEDKKKFGLFQQVMQYEKDVDNIAN AKDMLKSVEKSSRLHCLGNVLIQAGYNIGIQEPHTGLVGDFLVKSDTHVFEGETHFCNVE LAFENVMDKAEFENKEKVKKSDKTKKSKKAKKEKNKKVDKLDQLFPEGWDKK >gi|292606589|gb|ADGG01000021.1| GENE 215 187807 - 188259 706 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782240|ref|ZP_06747566.1| ## NR: gi|294782240|ref|ZP_06747566.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 150 1 150 150 288 100.0 6e-77 MSDLGIMISEMIGQATKGTSIIKASVETPPPNLTIKFDGQVIPSEQIYCSNYLLPHYHRD YTIDGIIDKIEIDVSKYDYHNTTQDVMGHKIPKLEGSGTFQGNGTYKSHKDIWFEDTLQK GDEVLVLVMGVHYVVVTKIVKMPSGAIEGV >gi|292606589|gb|ADGG01000021.1| GENE 216 188261 - 188686 465 141 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1214 NR:ns ## KEGG: CDR20291_1214 # Name: not_defined # Def: phage protein # Organism: C.difficile_R20291 # Pathway: not_defined # 15 141 18 142 142 83 41.0 2e-15 MEKDFNIFLKKAETEVEEMAIFKEYAIDFRTGEYIKEGNDIKVLEENEALKVWIFKALKT ERFRYTDVHSDDYGSELETNIGTIYHKTVKDALMINQIRDTLLVNPYIIECYNFEISNEE EYVPQITFNVRTIYGELEMEV >gi|292606589|gb|ADGG01000021.1| GENE 217 188687 - 189751 1240 354 aa, chain + ## HITS:1 COG:lin1287 KEGG:ns NR:ns ## COG: lin1287 COG3299 # Protein_GI_number: 16800355 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Listeria innocua # 10 348 15 354 361 119 30.0 8e-27 MKDKIELRNNFLDNLKNPLSKMEGTYNFDIAATFGITAEEVYKELEFWEKQTFIDTATED EYVDKHALMFGVKRRVGTKAKGILKITGKANSIIEENTIFLNRDGIKYKSLRKEYLSTAG VAEIEIECLSEGKIGNAAIGEITTFEIQNSNIYSVTNEKEIINGYDKEPNSVLVERAKEK ATRSAHSGNIYDYEQWAKQVDGVGKVLVKPLWNGNGTVKVLIANYNNDIADSSLIQKVRE RIQSDDGRPVGADVTVDSFTAKNINVSIQLILKAGFSISDVKEKIESLLKAVIKTGNATF EKANKSILSINRLEKAILEIEGINDNFVKVNNSNSNLEIAEDEILIVGTVVINE >gi|292606589|gb|ADGG01000021.1| GENE 218 189744 - 190394 437 216 aa, chain + ## HITS:1 COG:no KEGG:CTC02112 NR:ns ## KEGG: CTC02112 # Name: xkdT # Def: phage-like element pbsx protein XkdT # Organism: C.tetani # Pathway: not_defined # 69 186 94 218 219 70 34.0 3e-11 MSDRLIKKVSKIARNTLQEDLIRTLDLICEYAKNDIQKYKELLFIAFFNEQQVANYERFM ELDYKNGWSLQDRKDRIIYTLLSKNIFTTHVLKEQAKIFTNGEIEVIENYNDYSFIIKFT SVVGIPSNLDNFKNFIHINKPAHLNFSIEFRYNTHNQVAYLVHNILKSKTHKQIYDTRLY NDADVIGKYHKHIELSSMKHTSLKTIKNRNIYDERR >gi|292606589|gb|ADGG01000021.1| GENE 219 190398 - 191087 730 229 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782244|ref|ZP_06747570.1| ## NR: gi|294782244|ref|ZP_06747570.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 229 1 229 229 453 100.0 1e-126 MAEYTKHLRLIKPGGNDYYNIDDFNQNSELIDKETEKLNNAVTKIQEGATREKAGIVQYG TTEGKALEGMMLARMFGCVGYGGDIQETGVKDVNYIYYDRNTRKMYKCLNQNSDVSANVT NFIPLDNNSLLDRLENLDRNLLYKIDRWSPKDEDELVKTGIFQIKATTSKLKRGFCGSQC FVLVFNTSVNGDDYVTQIAFSYYDTFSIAIRTRNGGTKQWAPWRYLSAN >gi|292606589|gb|ADGG01000021.1| GENE 220 191134 - 191412 72 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782245|ref|ZP_06747571.1| ## NR: gi|294782245|ref|ZP_06747571.1| hypothetical protein HMPREF0400_00212 [Fusobacterium sp. 1_1_41FAA] # 1 92 1 92 92 147 100.0 2e-34 MENLIKIKKYSATTQDYISINSGTLVISEVVIYNLKNKIGIPLNSTIVSVSVGQSAGYCE HCTYNYETDTAHIGHIVPANNSRTANIYVAYI >gi|292606589|gb|ADGG01000021.1| GENE 221 191421 - 191717 61 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782246|ref|ZP_06747572.1| ## NR: gi|294782246|ref|ZP_06747572.1| hypothetical protein HMPREF0400_00213 [Fusobacterium sp. 1_1_41FAA] # 1 98 1 98 98 172 100.0 7e-42 MENLYKIEYKTDYDVLTILNRKIVIGSLETKGATASKTLIANGFSFKNSIVMATAKKDNC SVAVIHTGDNLDFSTLDATSGNVQNGICKVDFFILLRN >gi|292606589|gb|ADGG01000021.1| GENE 222 191723 - 192019 221 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782247|ref|ZP_06747573.1| ## NR: gi|294782247|ref|ZP_06747573.1| hypothetical protein HMPREF0400_00214 [Fusobacterium sp. 1_1_41FAA] # 1 98 2 99 99 171 98.0 2e-41 MENFIKVKNNKIFTIGNICIETINCTPNIAGVRTVKIESDFKNIFSIFLTGYITEGQNAE HLMRQVVRDYYSKIVATKQVRLYAAGNQSIELTIIGTI >gi|292606589|gb|ADGG01000021.1| GENE 223 192025 - 192339 287 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782248|ref|ZP_06747574.1| ## NR: gi|294782248|ref|ZP_06747574.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 104 1 104 104 172 100.0 5e-42 MENLIKFDNFNSHNQGWFQIASRLIVYGSFEYTYGINSLQNFTLSLPIPNWQNANVITSS LDTTTNNILSSMQARLTSATTLTVKASNSFGGKGLVSYLIIARV >gi|292606589|gb|ADGG01000021.1| GENE 224 192336 - 192641 215 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262067722|ref|ZP_06027334.1| ## NR: gi|262067722|ref|ZP_06027334.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 101 134 234 234 185 95.0 9e-46 MENLNTKPNGDIASVTSFRLGFNTSNILNTSKIKDKKIVYVTVRSDNMHISTQLPKNISR AMLVHGTNARTAILSIEETGFWLYGDITGITGIFLAEYVYA >gi|292606589|gb|ADGG01000021.1| GENE 225 192647 - 192913 326 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782249|ref|ZP_06747575.1| ## NR: gi|294782249|ref|ZP_06747575.1| hypothetical protein HMPREF0400_00217 [Fusobacterium sp. 1_1_41FAA] # 1 88 16 103 103 169 100.0 4e-41 MENLIKVEVIQMTNVLDYIAGLNITEWYAPLPSHIDVNKVISVTNVNQGNWGEYCNLDIK AKTLRIGAFGNGKTYPLNQLQVIVAYLA >gi|292606589|gb|ADGG01000021.1| GENE 226 192910 - 193239 125 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782252|ref|ZP_06747578.1| ## NR: gi|294782252|ref|ZP_06747578.1| hypothetical protein HMPREF0400_00218 [Fusobacterium sp. 1_1_41FAA] # 1 109 1 109 109 203 100.0 3e-51 MENLNRNWKILWQGISHEVQFYTTNIGANINFDNIFSLTIVGNTTCTIPGVLLKKLAINQ ELIIGHDNAVRSDAVFFFKKISNTFGIFGTRGVAEDIHLHGYNTLIIEY >gi|292606589|gb|ADGG01000021.1| GENE 227 193245 - 193571 279 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782251|ref|ZP_06747577.1| ## NR: gi|294782251|ref|ZP_06747577.1| hypothetical protein HMPREF0400_00219 [Fusobacterium sp. 1_1_41FAA] # 1 108 19 126 126 204 100.0 1e-51 MENLNRYEFINKTKGTRYTDLQFEKIGNIGHVFLDIPSGVSKTLTEGSLLFTFPKEFKPK SFNLKALVSYPNGQTARTRYDENSRNLYILSPIQVVESMYLDTFYILD >gi|292606589|gb|ADGG01000021.1| GENE 228 193563 - 193976 171 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782253|ref|ZP_06747579.1| ## NR: gi|294782253|ref|ZP_06747579.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 137 1 137 137 209 100.0 6e-53 MIKILYKINSLENLFTKYGNFSTDNNKLSGNISLIFKSNANDVLNQKFSVTENGLYLISA TQRVTNTVDTSETVKILKNSELLTRHDFNIPIVNSRRETNVTLSTIVYLTTSDIVLITRS NCDYICRQRDLLIFKLI >gi|292606589|gb|ADGG01000021.1| GENE 229 193994 - 194968 720 324 aa, chain + ## HITS:1 COG:CAC1110 KEGG:ns NR:ns ## COG: CAC1110 COG0582 # Protein_GI_number: 15894395 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Clostridium acetobutylicum # 13 314 23 325 340 62 23.0 1e-09 MNLVVLENFKKENVEIYLEYLNSCKSSNWETWETTYKTYCNNFKLFLVWFQKAYKNRLLL SKDTLLEMPTIIESYRNYCRNLGNSKRTLMNKTTAISTFYAWCVRRNKIKYHPFSEKLDR LRFTEKDKIRNSYFLTTEQILTVRLYMQVESKKYDLQDRILWELFLDSACRISAIHSLKL SQLDLENGYFKDVKEKEGYIVNAFFFNKCKELLKEWLKEREEKEIESEYLFIAKYKGKYA QMTQGAIRGRIKKLGKILGIEDLYPHTLRKTSINLINNLAGLGLASSYANHSSSGVTSKH YIQKVSATEIRNTLIVARKKLGIF >gi|292606589|gb|ADGG01000021.1| GENE 230 195158 - 195877 1148 239 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782255|ref|ZP_06747581.1| ## NR: gi|294782255|ref|ZP_06747581.1| hypothetical protein HMPREF0400_00222 [Fusobacterium sp. 1_1_41FAA] # 1 239 1 239 239 448 100.0 1e-124 MKTINFYKKEKLIFSVYAESLEDVLKSPTSYFQGYTQDMIITDITYQYPFFKDDVLREMS KEEKVRAGIDVQLDDGEFIKDKKLIAVPKPAGNSKYMYWDKEKSLWILDNQKEYDDYCNL IDDLKAKSLEYGFDYKVDGKEHRQRCRDKDIAFMVANVMALQIAEKLGKNKKTTWYFEDN HGMPAGLNELGMLMLYGTTFVQSVYDTENHFKTKVNPKELSKAEFETKRKEIHNKLVNG >gi|292606589|gb|ADGG01000021.1| GENE 231 195966 - 196466 641 166 aa, chain + ## HITS:1 COG:no KEGG:Sterm_2506 NR:ns ## KEGG: Sterm_2506 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 93 1 86 142 85 51.0 5e-16 MFVLSENSLEKLNGVHPKLVVFMEELIKESPYDFKITCGLRTAEEQNHEYQKGRTLLYDS NGNKLSKVSWCDGYKLKSKHQMKADGYGYAVDIAVLEKEKYTDKKTGEEKEKTVARWDYK YYKAIYDVAKSKGLIDKYGIVWGGNWKQKDLVHFQLGTADNIQFKR >gi|292606589|gb|ADGG01000021.1| GENE 232 196479 - 196838 475 119 aa, chain + ## HITS:1 COG:no KEGG:FN0636 NR:ns ## KEGG: FN0636 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 112 2 111 119 107 47.0 1e-22 MPELDEFNLKYYDGKDFILEKDYRYMIGEKLIHIPAGFKCDLASVPRIFRNVINTYGDHT KAAVIHDWLYRNGHNLGVSRKEADKVFLAVMKEQGVGFFKRQLMYRAVRTFGMFAYKED >gi|292606589|gb|ADGG01000021.1| GENE 233 196838 - 197137 215 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782258|ref|ZP_06747584.1| ## NR: gi|294782258|ref|ZP_06747584.1| sensor histidine kinase KinD [Fusobacterium sp. 1_1_41FAA] # 1 99 1 99 99 167 100.0 1e-40 MELEITLTLLGMLGTSLITVGGVILGYHNYLMRQINKRLKKETYYIDQEKLDKQLEEIKN SFEKQKDEIKAMISKLGDKVEADYQKIYDHLLNCNRRNG >gi|292606589|gb|ADGG01000021.1| GENE 234 197319 - 197747 606 142 aa, chain + ## HITS:1 COG:no KEGG:HPB8_12 NR:ns ## KEGG: HPB8_12 # Name: not_defined # Def: hypothetical protein # Organism: H.pylori_B8 # Pathway: not_defined # 1 142 1 139 145 72 32.0 3e-12 MFDAVQLAWFILRRCANSGTPISNLQLQKMLYFLQRANLQRENEALFFQNIRAWQFGPVV REVYYTFSVFSSLKIIPEDSDPNPVDIILEPFLLEEIDRRSTQRPWDLVDETHQKGGAWD IIFRDGLGNDKIIPLELIRNDG >gi|292606589|gb|ADGG01000021.1| GENE 235 197740 - 198735 834 331 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782260|ref|ZP_06747586.1| ## NR: gi|294782260|ref|ZP_06747586.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 331 1 331 331 553 100.0 1e-156 MDKNKKQINDIKREKLKNCIKTLSKEMSKENYQELFNDFKKIYDDGFRHFYSDISILLLN SDISYSLEPLKNDTRKDNFNNGINLDLLAENMRNFYEYAEEKDFVYLDQLNKLNDHITMD IARINYWKKLNDSYSLSFKGLSDQLSTSKDLLENTNNESKEVKKDLVSIMGIFLGIFLFF QLNFSQIKDLLEYDPFSRIIYLIIFNIVFLVGLYLIFVIIDFLIHREPRLLKLFIDTEKK LPNKLGGLCIVFYIGILGTCGWFLYSDNSRKTISKIENSIEETNESLNHEIKKKNVEINI LKEKITELENQIKEINKNDTKLEENTKIKQD >gi|292606589|gb|ADGG01000021.1| GENE 236 199125 - 199520 407 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237740662|ref|ZP_04571143.1| ## NR: gi|237740662|ref|ZP_04571143.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] # 1 131 1 131 159 245 97.0 7e-64 MEINDIYFAKREFYQIIRDIGGVWNDSKERPIVCLLKMDDTDIYWAIPMGNLNHRSEKAK ERLDFYLNIEESDIRSCFYHIGKTTTDTIFFISDVVPIKEIYIDREYLGFNNIHYVIKNK KLISELERKLK >gi|292606589|gb|ADGG01000021.1| GENE 237 199681 - 199932 283 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782261|ref|ZP_06747587.1| ## NR: gi|294782261|ref|ZP_06747587.1| hypothetical protein HMPREF0400_00229 [Fusobacterium sp. 1_1_41FAA] # 1 83 1 83 83 130 100.0 3e-29 MNNQEKAKEEFIQVYIEHCKKCKEIAYIKNPYGMLDGHGRETKELTIKLLEEMERIKKKY DVHKIDFYYEDASKIFNKVFFDE >gi|292606589|gb|ADGG01000021.1| GENE 238 200192 - 200908 749 238 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782262|ref|ZP_06747588.1| ## NR: gi|294782262|ref|ZP_06747588.1| ABC transporter ATP-binding protein [Fusobacterium sp. 1_1_41FAA] # 1 238 60 297 297 370 100.0 1e-101 MLKLCDENKESIKFRFLGSNEIDARDLSKFLDATVTTFEKIVNNSEQDAFIKLNISAIEK GSFLIELVSLISKKLPKIFETIKNSKEIIGAFKEFLEIKEKLKDKNIEAKEDGLYYKDTK KIENYYYKPTMIKAKKEVDEALRNFAINLPRERELNVETSMGNFKIDEKVKESILEPLPK KENKKETVTNKYRREVIVKKTDLPCQSMWELITDKVIKATILDEDFKKLVIDNKIRKF >gi|292606589|gb|ADGG01000021.1| GENE 239 201015 - 201185 292 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782263|ref|ZP_06747589.1| ## NR: gi|294782263|ref|ZP_06747589.1| hypothetical protein HMPREF0400_00231 [Fusobacterium sp. 1_1_41FAA] # 1 56 1 56 56 90 100.0 2e-17 MTRIIDPEFHRLAMLIDPYLVYDEEKGTFVIPEDAPKEIHEAYKRKKEIWEKYQEY >gi|292606589|gb|ADGG01000021.1| GENE 240 201419 - 202633 1241 404 aa, chain + ## HITS:1 COG:FN1066 KEGG:ns NR:ns ## COG: FN1066 COG1570 # Protein_GI_number: 19704401 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Fusobacterium nucleatum # 1 402 1 402 404 620 82.0 1e-177 MEKVYSVSEFNRMVKSYIDDIDDFQDFYIEGEISNITYYKSGHLYFSVKDSKSQIKCAAF NYKMKRIPEDLKEGDAIKLFGDVGFYEVKGEFQVLVRHIEKQNALGALFAKLEKVKEKMA EKGYFDESHKKELPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYVYPAKVQGAGAE QEIIKGIETLNKIEEIDLIIAGRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAVGHEIDF LLSDLTADKRAATPTQAIELSVPEKESLIKSLDDKKIYLAKLLKSYLEDMKRELSIRMDN YHLKNFPSTINNYRELIVEKEEILTKSIKDFLEQKRHLFEIKIDKVSVLNPINTLKRGYS VSQVKNKRIDVLEDVEVNDEMTTILKNGRLISIVKEKIYEKNND >gi|292606589|gb|ADGG01000021.1| GENE 241 202614 - 203414 1165 266 aa, chain + ## HITS:1 COG:FN1067 KEGG:ns NR:ns ## COG: FN1067 COG0457 # Protein_GI_number: 19704402 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 55 266 26 237 237 304 78.0 1e-82 MKKIMISLFILVSMLGFAEGENEGSSIREVPTLGNQSAPVENTGTVSNGGGENQTPDDGG ETVENPETPKEATGVREYRPQSLIQLDEQMKRGTRSSIIQLNARYEQELNAYLESVSYNS DVIFYLANEYMMLNNYSRANKIFLKDNKDLRNVFGAATTYRFMGQHRNAIEKYNQAISIN SGFAESYLGRGLSYRNLNEYDNAVSDLKTYLSKTGAHDGYVALADVYFKMGKNKEAYSIA SQGIAKYGNSGILKVLANNILKNKID >gi|292606589|gb|ADGG01000021.1| GENE 242 203439 - 204293 1015 284 aa, chain + ## HITS:1 COG:FN1068 KEGG:ns NR:ns ## COG: FN1068 COG0758 # Protein_GI_number: 19704403 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Fusobacterium nucleatum # 1 284 5 288 288 455 84.0 1e-128 MNYDFITINDDIYPECLKEISDPPEKLYYKGNLELLKSERMIAVVGTRNPSSYGKLCCEY MIKKMSKANITIVSGFAKGIDSIAHKTSLLTGTKTIAVIASGLDIIYPASNLSLYKEIEE KGLILTEYEAGTKPFKGNFPQRNRIIAALSKGVIVVESKDRGGSLITADLALEYNRDVYA IPGDIFSEYSKGCNNLIRDAKAKSLSNIKELLEDYNWESKEEVNHLNLTKNQKLILDSLS SEKNLDRILEETKIEETEILSELITLEIMGLIKSIAGGRYKKIL >gi|292606589|gb|ADGG01000021.1| GENE 243 204356 - 208156 4051 1266 aa, chain + ## HITS:1 COG:FN1069_1 KEGG:ns NR:ns ## COG: FN1069_1 COG0550 # Protein_GI_number: 19704404 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Fusobacterium nucleatum # 1 681 4 684 684 1077 89.0 0 MAKKLDKNKLVIVESPAKAKTIEKILGSSYKVISSYGHIIDLPKTKIGVDVKDNFKPSYL TIKGKGEVIKKLKEAAKKADEIYLASDPDREGESIAWHIANTLKLDYNEKNRIEFNEITE KAIKEAVKNPRKINIARVNSQQARRILDRLVGYEISPFLWKLISPNTSAGRVQSVALKII CELEDKIKSFVPEKYWDVKGIFEGQYNLNLYKIDEKKIDKLKDEKLLERVKKDLKKKYEV ISSKVSNKIKNPPLPLKTSTLQQLASSYLGFSASKTMTVAQKLYEGISINGEHKGLITYM RTDSTRISEEAKEMARKYITKEYGKEYLGSVSPKTKKNDKNVQDAHEGVRPTDINLTPQS IMQFLDKDQFKLYNLIWQRFLISQLAAMKYEQFEYILEKDKIQYRGSINKIIFDGYYKVF KEEEDLPVGDFPEIKEGDKFTLDKLDIKEDYTKPPARLTESSLVKTLESEGIGRPSTYAS IIDTLKKREYVELQNKSFVPTEIGYEVKTQLDKFFPNIMNIKFTAKLEDELDEVDSGDKD WIDLLKTFYTELQKYEEKCKVSVEKELEKLVESDIIGKDGKPLIMKIGRFGRYLTSQDED SKENISLKGIEISLEEIKSGKIYVKDKIEELLKKKEGEKTDIILENGARLILKYGRFGAY LESEKFKEDNVRKTIPKDIKTKIENNTIKRENGILCLKEIFEKIEAENAAILKKAGKCEK CGKPFEIKSGRWGKFLACTGYPECKNIKKISKEMLEKSIINKQDLNNKNMEVENMKENKP YDDANLESIFKYSQKLIGMTFKNVLEKYYIENKQDASLLEEEISKYNNSKAKGGLGNLLE KYYYFYEPNNISEPDFPKVGTELKVTPYEKKSSSVNELRAGERLVISMIPNNEEISPKFE NSHLKKKISKILMIWYERKKEQLKTLNKINFVNLFDIYDKLYEKDFEIICEDYEKIANKI REGKAHELSEGDTRYLGACTKGATAEDSLQPQYYNKEVYAKRRAFSLKQSYMTYLLNSYV KTGLMEYDSIFSNENLKNNKFDEYIINKINQHIGKTEKELYEKFKINDEANHRNRLLVNK ILGVNTENSEEFAKANIVIKTIRVQKNGTPKESMSFPKICIKDFVKQNFEDSYEYTYFSE TRFLFVVFRENESGIYELRGAKFWNMPIDELETIGKLEWEAYKNKFIEGVNFKISSIVGN DLPKKSDHKIFHLRPHSRNSAYLINGERYGNGKDSDMDLLPNGDKIVYQCFWLNNTYIKE IIKDIL >gi|292606589|gb|ADGG01000021.1| GENE 244 208173 - 209444 1280 423 aa, chain + ## HITS:1 COG:SP1336 KEGG:ns NR:ns ## COG: SP1336 COG0270 # Protein_GI_number: 15901190 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Streptococcus pneumoniae TIGR4 # 5 190 4 170 407 97 31.0 4e-20 MKLTVIELFAGVGGFRVGLNNIIKIDSQNKAVENGKWEFIWANQFEPSTKAQYAFDCYVT RFGKENISNEDINKVKKNLIPKHSLLVGGFPCQDYSVARTLSNEKGIEGKKGVLFWDIKD ILVEKGTPFVLLENVDRLLKSPSIKRGKDFAVMLKTFDELGYNVEWRVINAGEYSMPQKR KRVFIFAHKKNLNYSKFFLESDINILNKNLFNKIFPVKNLEVLKEVDLKKYKDIVDVSEN YLEEKFLDTGVMINGKVFSSSIEEITEPIFSLGQILEISSKFNPKLDEFIVENDKLEKWK YLKGAKKINRISKTGHEYTYSEGTISFPENLDEPARTILTSESNLSRSSHIIYDQNIKKY RTLTPIECELIQMFPVNWTDTMPKKNRYFMMGNALVTGIIKRLEPKLREIIEKEKENELK KMN >gi|292606589|gb|ADGG01000021.1| GENE 245 209579 - 210883 1900 434 aa, chain + ## HITS:1 COG:FN1070 KEGG:ns NR:ns ## COG: FN1070 COG1206 # Protein_GI_number: 19704405 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Fusobacterium nucleatum # 1 434 1 434 434 737 94.0 0 MEKEVIVVGAGLAGSEAAYQLAKRGIKVKLYEMKAKQKTPAHSKDYYSELVCSNSLGSDS LENASGLMKEELRILGSMLIEVADRNRVPAGQALAVDRDGFSEEITKILKNTENIEIIEE EFTEIPEDKIVIIASGPLTSDKLFEKISEITGEESLYFYDAAAPIVTFESINMDIAYFQS RYGKGDGEYINCPMNKEEYYNFYNELIKAERAELKNFEKEKLFDACMPIEKIAMSGEKTM TFGPLKPKGLINPKTDKMDHAVVQLRQDDKEGKLYNIVGFQTNLKFGEQKRVFSMIPGLE NAEFVRYGVMHRNTFINSTKLLDKTLKLKNKDNVYFAGQITGGEGYVTAIATGMYAAINV ANRLNGEKEFILEDISEIGAIVNYITEEKKKFQPMGANFGIIRSLDENIRDKKEKYRRLS QRAIEYLKKSIKGV >gi|292606589|gb|ADGG01000021.1| GENE 246 210889 - 211731 758 280 aa, chain + ## HITS:1 COG:FN1071 KEGG:ns NR:ns ## COG: FN1071 COG4974 # Protein_GI_number: 19704406 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Fusobacterium nucleatum # 2 280 7 285 290 336 74.0 3e-92 MIEKSIKNFIYYLEFEENKKHNTVISIRKDLNQFLIYLNEHDIIDFNKLDELLIKEYFTK LKTEEISASTFNRRLSSIKKFYKYLVDKGLKEKGSEILIESEKNDEKKIEYLTPEEINLV RTTMEGENFNILRDRLMFELLYSSGMTVAELLSLGEVNFNLEKREIYILKNKLSKTMYFS ETCKKFYIKFLNSKKEKFKEDYNPNIIFNNNSNERLTDRSVRRLINKYAEMANLNKEISP YTLRHSFCIYMLKNGMPKEYLARLLDLKVVGLLDVYEGLC >gi|292606589|gb|ADGG01000021.1| GENE 247 211744 - 212844 1477 366 aa, chain + ## HITS:1 COG:FN1072 KEGG:ns NR:ns ## COG: FN1072 COG1161 # Protein_GI_number: 19704407 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 366 1 366 366 662 88.0 0 MTKKCVGCGIELQNTDKDLQGYTPKSIDSKEDTYCQRCFQLKHYGKYSTNKMTREDYKKE VGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDLIPDEKHPSEVANWV KDRLAEESIAPLDIAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLL GKRIATVSKYPGTTIKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDSCAQKIIPAGEIS RKTFKAKYDRIIMIDNLVKIRVLNDEEVKPIFAIYAAKDVKFHETTIERAKELEEGNFFD IPCECCRDEYNKHKKITKTLTIKTGEELVFKGLGWVSVKRGPLKIEVTLAEEIEISIRKA FIKPRR >gi|292606589|gb|ADGG01000021.1| GENE 248 212846 - 213346 253 166 aa, chain + ## HITS:1 COG:no KEGG:FN1073 NR:ns ## KEGG: FN1073 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 166 1 168 168 206 61.0 3e-52 MKNKKTVKQKNSLFEKISTLSFFTLIPFVIFLLYGLTSVFRETNDEVELPKIMIKDIKNV RIAIDQYYKATGTFPNLELVNTDEKLEQIFFEQDGERIYFKDFLKENTMPSTPAYKKLSK TNKVTIVKSFKKTTNDGGWNYNIKTGEIHANLPGNFFGQGIDWNSY >gi|292606589|gb|ADGG01000021.1| GENE 249 213371 - 214480 726 369 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 60 368 9 320 336 284 43 4e-75 MGIFDKLFRRNKNVETEEVEKVEEKKEEIKEEIKEEVKVESTENIQNTENIEKIENEVVE EVTKVEEPVKVNISQRLTKSKEGFFSKLKNIFTSKSKIDDSIYEELEDLLIQSDVGLGMT TNLINDLEKKVKANKISETSEVYEILKGLMSEFLLSQDSKVHLKDNRINVILIVGVNGVG KTTTIGKLALKYKKLGKKVLLGAGDTFRAAAVEQLEEWARRADVDIVKGREGADPASVVY DTLSKAEATKADVVIIDTAGRLHNKANLMRELEKINNIIKKKIGEQEYESLLVIDGTTGQ NGLNQAKEFNSVTDLTGFIVTKLDGTAKGGIVFSVSEELKKPIKFIGLGEKIEDLIEFNA KDFVEAIFN >gi|292606589|gb|ADGG01000021.1| GENE 250 216161 - 216823 589 220 aa, chain - ## HITS:1 COG:no KEGG:TDE0330 NR:ns ## KEGG: TDE0330 # Name: not_defined # Def: CRISPR-associated Csn2 family protein # Organism: T.denticola # Pathway: not_defined # 11 220 11 224 224 68 31.0 2e-10 MIFQYQGFNFKIDFENKSIFSLIIENKKLYRKIIEDLINNISIDDGNIILSKNNKLIVPE KEIFVFSDYFNFDVNKFVLNKYYKELKNLSENDFFDETVEIKEVLRNYVTKLVENEYSIK LEEDLDISQILKAFGVKFQRNEDLLLNLFEWIKILNELLGYEIFFFINLENFLSDDELVE FSKFILYNKYKVVFLENFNRNKLFDDDNLIIIDNDLCEIF >gi|292606589|gb|ADGG01000021.1| GENE 251 216820 - 217125 270 101 aa, chain - ## HITS:1 COG:SPy1048 KEGG:ns NR:ns ## COG: SPy1048 COG3512 # Protein_GI_number: 15675043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 101 6 106 113 101 50.0 4e-22 MRMLLFFDLPSVTNSDLKEYRKFRKFLIENGFSMLQESVYSKLLLHNTASHMMLEKLQKN KPGKGSVCVLIITEKQYQKMVLLIGELKGTFLETDERLVIL >gi|292606589|gb|ADGG01000021.1| GENE 252 217130 - 218008 717 292 aa, chain - ## HITS:1 COG:SPy1047 KEGG:ns NR:ns ## COG: SPy1047 COG1518 # Protein_GI_number: 15675042 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 287 1 287 289 226 40.0 4e-59 MSGWRVVVVTGRSKLDLRYNSISIRRDNGTDFIHIGEVGTLILETTAISITAALMCELIN QKVKVIFCDEKSNPHFELLPFYGSHDCSAKIKEQISWTDFFKESLWTIIVREKIENQMKL LKKLNKEEYKLLQEYSSQIEHNDSTNREGHSAKVYFSSLFGNDFSRNKENSLNAFLNYGY QILLSTFNKEIVANGYLTQIGLFHKNMFNYYNLSSDLMEPFRVIIDELAYKENPQKFEKD EKRKLQNILNFKYRINENNHYLSEVIKIYTKSIFDTLNSNDLSLVRFFTDEL >gi|292606589|gb|ADGG01000021.1| GENE 253 218032 - 222135 4584 1367 aa, chain - ## HITS:1 COG:lin2744 KEGG:ns NR:ns ## COG: lin2744 COG3513 # Protein_GI_number: 16801805 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 9 1177 5 1176 1334 444 33.0 1e-124 MKKQQFSDYYLGFDIGTNSVGWCVTDFNYNVLRFNKKDMWGSRLFDEAKTAAERRVQRNS RRRLKRRKWRLNLLEEIFSDEILKIDSNFFRRLKESSLWLEDKSSKEKFTLFNDDNYKDY DFYKQYPTIFHLRNELIKNPEKKDIRLVYLALHSIFKSRGHFLFEGQNLKDIKNFETLYN NLMAFLEDNDIYKNIDSSYIGNLENIICDSKKGLKDKEKEFKEIFNSDKQLVGFFKLSVG SSVSLNDLFDTDEYKKGEVEKEKISFREQIYEDDKPIYYSILGEKIEFLDIAKSFYDFMV LNNILADSQYISEAKVKLYDEHKRDLKNLKYIIRKYNKENYDKLFKDKNESNYSAYIGLN KEKGKKEVIEKSRLKIDDFAKIIKGYLPKAEKIDEKDRSIFNEILDKIELKTILPKQRIS DNGTLPYQIHEAELEKILENQAKYYDFLNHEENGISTKDKLLMTFKFRIPYYVGPLNSYH KNKGGNSWIVRKEEGKILPWNFEQKVDIEKSAEEFIKRMTNKCTYLNGEDVIPKDSFLYS EYIILNELNKVQVNDEFLNKEIKKKIIEDLFKKSKKISEKNFREYLLVNQITNKTVELKG VKDAFNSNYVSYIKFKDIFGDKLNLDIYKEISEKSILWKCLYGDDKKIFEKKIKSVYGDI LTKDEIKKINSFKFNTWGRLSEKLLTEIEFIDLETGECYSSVMDALRRTNYNLMELLSSK FTLQENIDNENKEVSEFSYRDLVEESYVSPSLKRAILQTLKIYEEIRKITGRIPKKVFIE MARGGDETMKNKKIPARQEQLKKLYDSCGKDISNFSIDIKEMKNSLNSYDNNSLRQKKLY LYYLQFGKCMYTGKEIDLNRLLQNNDTYDIDHIYPRSKVIKDDSFDNLVLVLKNENAEKS NEYPLKKEIQEKMKSFWKFLKEKNFISDEKYKRLTGKDEFELRGFMARQLVNVRQTTKEA GKILQQIEPEIKIVYSKAEIASSFREMFDFIKVRELNDTHHAKDAYLNIVAGNVYNTKFT EKPYRYLQEIKENYDVKKIYNYDIKNAWDKEKSLEIVKKNMEKNTVNITRFIKEEKGQLF DLNPIRKGETSNEIIAIKPKFYEGSTEKLNEKYGYYKSLNPAYFIYVEHKEKNKIIRSFE RVNLVDVNKIKDEKSLIKYLIENKGLIEPKVIKKVYKRQVILINNFPYSIVALDSNKLMD FENLKPLFLERKYEKILKNAIKFLEDNQGKTEEYYKFLYLKKKDRNEKNETIDSVKERYN IEFNEMYDKFLEKLDSKDYKNYINNKKYSELVNVKEKFIKLNLFDKAFTLKSFLDLFNRK TMADFSKVGLTKYLGKIQKISSNVLSKNELHLLEESVTGLFVKKIKL >gi|292606589|gb|ADGG01000021.1| GENE 254 222533 - 223300 976 255 aa, chain - ## HITS:1 COG:no KEGG:FN1144 NR:ns ## KEGG: FN1144 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 253 1 247 249 207 49.0 4e-52 MKKSLKKILFTVLTVFAIFFVVACGNKEDTKINKEEVIKNFSEASNNVKSADVVTTVNMT PKKGGESINVTVAASLIVEPLTLKMTMETKGQNIKINSFIKDDVMYIQNPVDNTWIKQTL PKEVSEQFKHITNNNIDNYELFKDNLDKIDIKEKDGNYLISIIKDTGFLKEAMKKQNSNM GILGQGENFEVDNITLEYVVDKETYFTKSSVASFETKLQGQDVKVSTNTEFSNINNIKEI TIPEEALNAFTIPGK >gi|292606589|gb|ADGG01000021.1| GENE 255 223324 - 224070 906 248 aa, chain - ## HITS:1 COG:no KEGG:FN1144 NR:ns ## KEGG: FN1144 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 245 1 242 249 162 40.0 1e-38 MKKSFKKILFTILTVFAVFFVVACGNKEDAKINKEEVLKKSAEVANDIKSGNKLVNTIME IKGGVTVEYIIDSSIIIEPFSMKLTLEQKGQDAKVTTFVKDGIMYMSNPVDNTWEKQAAT FETIEPFKNALDTSTEIYNMLKDHLDKVDIKEKDGNYIITVPKNSDFIKESLKEQMNSIV GQNPDFNPDNVTWEYVIDKETYFSKVLSLSFEAKLDGQDVKITTTNTLSNINSVEEITVP EEALNLNN >gi|292606589|gb|ADGG01000021.1| GENE 256 224094 - 224837 987 247 aa, chain - ## HITS:1 COG:no KEGG:FN1144 NR:ns ## KEGG: FN1144 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 245 1 243 249 156 39.0 5e-37 MKKSLKKILFTVLTVFAVFFVVACGNKEDSKLNKEEILQKNVEATNNIKSVNKLVTAKIE LKSGESVEYMADISLIKDPFATKIVMDAGPENGELTTFIKDGMMYVTGTGGNTWEQQAIP EETIEEYKNILNDSIEIYEVLKDNLDKVSIKEDGGNYIVSVSKNSDFLNEYIKNQMSDIV GGEDFEPNNSTLEYIIDKETYFLKSLLITFIAEVQGQKIKAKTETTFSNINNVEEIIIPE EALNSNN >gi|292606589|gb|ADGG01000021.1| GENE 257 224957 - 226342 1466 461 aa, chain + ## HITS:1 COG:FN0222 KEGG:ns NR:ns ## COG: FN0222 COG2211 # Protein_GI_number: 19703567 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Fusobacterium nucleatum # 15 457 1 443 448 676 91.0 0 MSISENNFILKGVRMKKLTTKVQVLYALGVSYAIVDQIFAQWILYFYLPSESSGLKPFMA PVLVSIALAISRLVDMITDPLVGFLSDKYNSKYGRRIPFVAVGTIPLIIVTIAFFYPPTS SEKASFYYLMLIGSLFFTFYTIVGAPYNALIPEIGRTPEERLNLSTWQSVFRLSYTAIAI ILPGILIKMIGGNDVLFGIRGMIMFLCVIVFIGLTTTVFTVRERDYSTGEVSNVSFKETI GIIIKNKNFILYLFGMMFFFIGFNNLRAIMNYYVEDIMGYGKKEITIASALLFGAAAICF YPTNKLSKKYGYRKIMLYCLAMLIVSTSMLFFLGKIFPVKFGFILFAIIGIPLAGAAFIF PPAMLSEISTQISEDTGARIEGLSFGIQGFFMKTSFLISIVTLPIILVMGNDVSILSAIS SGVSKVEKNGIYLASLSSVFFFIISFIFYYKYSDSKKVDKK >gi|292606589|gb|ADGG01000021.1| GENE 258 226439 - 226648 373 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237740642|ref|ZP_04571123.1| ## NR: gi|237740642|ref|ZP_04571123.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] # 1 69 1 69 69 73 100.0 3e-12 MENLEKETLIQKIKDLEVILKEMDLKIETAKKEVKMLENNKENLTDLLDLYTRQLEYGKK DFKQRASDK >gi|292606589|gb|ADGG01000021.1| GENE 259 226678 - 228396 2011 572 aa, chain - ## HITS:1 COG:FN0734 KEGG:ns NR:ns ## COG: FN0734 COG1032 # Protein_GI_number: 19704069 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 1 566 1 566 568 1137 96.0 0 MKFLPTTKEEMKSLGWDSIDVLLISGDTYLDTSYNGSALVGKWLVEHGFKVGIIAQPEVD IPDDITRLGEPNLFFAISGGCVDSMVANYTATKKRRQQDDFTPGGENNKRPDRAVLVYSN MIRRFFKGTTKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGEMSMLQL ANALKNGEDWQNIRGLCYLSKEPREDYLSLPSHADCLADKDKFIEAFHTFYLNCDPITAK GLCQKCDDRYLIQNPPSESYSEEIMDKIYSMEFARDVHPYYKKMGAVRALDTIKYSVTTH RGCYGECNFCAIAIHQGRTIMSRSQNSIVEEVKNIAETPKFHGNISDVGGPTANMYGLEC KKKLKLGACPDRRCLYPKKCPHLQVNHNNQVELLKKLKKIPNIKKIFIASGIRYDMILDD NKCGQMYLKEIIKDHISGQMKIAPEHTEDKILGLMGKDGKSCLNEFKNQFYKINNELGKK QFLTYYLIAAHPGCKDKDMMDLKKYASQELRVNPEQVQIFTPTPSTYSTLMYYTEKDPFT NQKLFVEKDNGKKQKQKDIVTEKRNNNNYKKR >gi|292606589|gb|ADGG01000021.1| GENE 260 228403 - 229635 1894 410 aa, chain - ## HITS:1 COG:FN0733 KEGG:ns NR:ns ## COG: FN0733 COG2195 # Protein_GI_number: 19704068 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 2 410 4 412 412 722 92.0 0 MEKYSTLKERFLRYVKFNTRSDEKSETIPSTPSQMEFAKMLKKELEDLGLSNVFINKACF VNATLPSNIDKKVATVGFIAHMDTADFNAEGINPQIIENYDGNDIVLNKEKNIVLKVDEF PNLKNYISKTLITTDGTTLLGSDDKSGIVEIIEAVKYLKEHPEIKHGDIKMAFGPDEEIG RGADYFDVKEFAADYAYTMDGGPVGELEYESFNAAQATFKIKGVSVHPGTAKGKMINAGL IASEIIQMFPKDEVPEKTEGYEGFYYLVETNTSCESGEVVYILRDHDKAKFLAKKEFVKE LVKKVNEKYGKEVVELELKDEYYNMGEIIKDHMYVVDIAKQAMENLGIKPLIKAIRGGTD GSKISFMGLPTPNIFAGGENFHGKYEFVALESMEKATDVIVEISKLNAER >gi|292606589|gb|ADGG01000021.1| GENE 261 229846 - 230661 1149 271 aa, chain + ## HITS:1 COG:YGR231c KEGG:ns NR:ns ## COG: YGR231c COG0330 # Protein_GI_number: 6321670 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Saccharomyces cerevisiae # 28 219 59 253 315 84 26.0 2e-16 MEGKKYFKMVLFGAIGVFVLLLILTNCYTVDTGEVVIISTFGKITRVENEGLHFKIPFVQ SKTFMETREKTYIFGKTDEMDTTMEVSTKDMQSIKLEFTVQASITDPEKLYRAFNNKHEQ RFIRPRVKEIIQATIAKYTIEEFVSKRAEISKLIFEDLKDDFSQYGMSVSNVSIVNHDFS DEYERAIESKKVAEQEVEKARAEQEKLKVEAENKVRLAEYSLQEKELQAKANAVESNSLT PQLLRKMAIEKWDGKLPQVQGNNGSTLINLD >gi|292606589|gb|ADGG01000021.1| GENE 262 230824 - 232017 1280 397 aa, chain - ## HITS:1 COG:FN0732 KEGG:ns NR:ns ## COG: FN0732 COG1323 # Protein_GI_number: 19704067 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Fusobacterium nucleatum # 1 393 1 393 396 589 81.0 1e-168 MFKNVIGLVVEYNPFHNGHLHHIQEIDKLFEDNIKIAVMSGDFVQRGEPSLINKFEKTKI ALSQGIDIVIELPVFYSSQSAEIFAKGSVSLLDKLSCSHMVFGSESNDLDNLKKITSLSL TDEFTKALKEFLDKGFSYPTAFSKAISDKKFGSNDILALEYLKAIETIDSKIKAYCIKRE KTGYYDDEKDNFASASYIRKVLLSSNETEDNKLNKIKNLVPEFSYKILEENFGAFSCLND FYDLMKYNIIRNYSSLKNIQDLEVGLENRLYKYSLENLSFKDFFDKILSKRLTISRLQRI LLHTLLDLTDELTDKVKNKAPYVKILGFSNKGQEYLNYLKKLDDYNERKILTSNRNLKEI LSEEELELFNFNELASQIYRIKSSYNNIGYPIINSKT >gi|292606589|gb|ADGG01000021.1| GENE 263 232036 - 232569 705 177 aa, chain - ## HITS:1 COG:no KEGG:FN0731 NR:ns ## KEGG: FN0731 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 177 1 177 177 228 79.0 8e-59 MKKLVLISCFVLSVLSFGAGKTLPENVENNIRSAVSNYSGSERRENYDWLKDSYLEMVDR LDKAGIPEIDKQTIIKRLEAMYGSNYPKQLARVNDEINDYKGLVNRIREEQNAIQQKVEA QNKKSKEEINSILSSSSIPKADLKKIEENAKIEYPDDYTLQKAFIKGAIKTYNDLKK >gi|292606589|gb|ADGG01000021.1| GENE 264 232581 - 233267 980 228 aa, chain - ## HITS:1 COG:FN0729 KEGG:ns NR:ns ## COG: FN0729 COG0588 # Protein_GI_number: 19704064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Fusobacterium nucleatum # 1 228 1 228 228 430 95.0 1e-120 MKLVLIRHGESAWNLENRFTGWKDVDLSPKGIEEAKAGGKILKEMNLVFDVAYTSYLKRA IKTLNIVLEEMDELYIPVYKSWRLNERHYGALQGLNKAETAKKYGDEQVHIWRRSFDIAP PSIDKDSEYYPKSDRRYADLPDSEIPLGESLKDTIARVLPYWHSDISKSLQEGKNVIVAA HGNSLRALIKYLLNISNEDILNLNLVTGKPMIFEIDKDLKVISAPELF >gi|292606589|gb|ADGG01000021.1| GENE 265 233393 - 234115 649 240 aa, chain + ## HITS:1 COG:pli0008 KEGG:ns NR:ns ## COG: pli0008 COG3177 # Protein_GI_number: 18450294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 26 209 17 210 254 75 28.0 1e-13 MNKILETLLEEKETKLKGSLYHLTQIKFSYNSNHIEGSKLTEDETRYIYETNSFIGDKEK IVSIDDINETVNHFKCFDYILENIDILDEKLIKNLHKILKNNTSDSQKEWFKVGDYKLKA NFISNIKTTSPSNVKKEIKKLLDEYNSKIKITFDDIVDFHYKFEAIHPFQDGNGRVGRLI MFKECLRNDIVPFIIDEEHKLFYYRGLKNYKEDKTYLIETCLSAQDRYIKLLDELEINVK >gi|292606589|gb|ADGG01000021.1| GENE 266 234128 - 234883 1115 251 aa, chain + ## HITS:1 COG:no KEGG:FN0728 NR:ns ## KEGG: FN0728 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 41 251 1 211 211 379 90.0 1e-104 MQATKEWLEKWEKVKNKLQPNSNLLDYFTLKEIAGKEIDVMDIGPCSIPTGEFLVADPLV YLVSKYETEYFQKIPTGEFRTEVCVVKATDGDCDRYAAVRLKFNDNEVSYFEEAMKGTED LENINEGDFFGFNVDAGLACICDKKLHELYCEFDKKWCDENPDGNTYDDYFADLFKKSYE DNPKYQRDGGDWINWTIPGTDYHLPMFQSGFGDGAYPVYLAYDKDGNVCQLIVELIDIEL VYSDVDDEDDE >gi|292606589|gb|ADGG01000021.1| GENE 267 234964 - 235281 393 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782292|ref|ZP_06747618.1| ## NR: gi|294782292|ref|ZP_06747618.1| surface protein [Fusobacterium sp. 1_1_41FAA] # 1 105 1 105 105 152 100.0 6e-36 MFWKLLGAVSLFNLLKSNENKNNNLECEIEKLEEKIGNIEKEQKKSKLKREIRSLKYRIS EIDKEIYEGDLSVEDPYFHSLCEEVAPLELKLLDLEYELQKLEDY >gi|292606589|gb|ADGG01000021.1| GENE 268 235616 - 236464 1027 282 aa, chain + ## HITS:1 COG:no KEGG:FN0331 NR:ns ## KEGG: FN0331 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 279 20 308 329 272 54.0 1e-71 MQEQEIIALINSKGSFILEDSKANAEFIAYVDCKTDELFETSAKIEWKVSDKISLEDIKR FKIYHLKVKELGENTFLLIDILQKDVKNALLENTLKECEQNASVTVEEPNLGKFVLDKKT KSLYSKLKWLSEKEEIDVRLDINEDNRINTLKKVGAFFITLEKIFNDKRDWDKKLKTYSA EHLVDLATELRKNSKSLFKFLKVWKWYFVAKMKLISLVVETDGEIVATFNDRKLFLGHNI IVKANVNKNEISSATVENFNIEDYKKIEVVETDIETKEDKEG >gi|292606589|gb|ADGG01000021.1| GENE 269 236518 - 236721 331 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKISLVILVLAGILVGCTHTEKTATGGAIAGAAVGAMLGNDVRGTAVGAAIGGALGAGA GELTKNK >gi|292606589|gb|ADGG01000021.1| GENE 270 237006 - 237512 699 168 aa, chain + ## HITS:1 COG:no KEGG:FN0688 NR:ns ## KEGG: FN0688 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 18 162 1 146 153 176 63.0 2e-43 MKKMFRYVLLVFVFLMLVACGKPDSQKAFEKNFKQTITDVSKKMKDGNEVSKMLAGILEK GSYKVNKVNEEKNMAELDVTIKSADFVKYMTEYLVALKPLFDSNMGEEAFQKKSLEYFEN LTKKELDYTETDVTVHMEKVDGEWKVINTEDVLTAIFGGLTDAAADFN >gi|292606589|gb|ADGG01000021.1| GENE 271 237568 - 239139 2104 523 aa, chain - ## HITS:1 COG:no KEGG:FN0616 NR:ns ## KEGG: FN0616 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 31 523 2 495 495 799 84.0 0 MEVDMKKFKFLMLFCLFGSMAFATPKTTKAVKNEYDLKFNPNKYVSKETEVNGKKVKYRA YENIVYVKNPVDKEYQNMNIYIPEEYFKNSSIGNYNSSNAPIFLPNSVGGYMPGKADKVG VGRDGKANSLSYALSKGYVVAAPGARGRTLKDKNGAYTGKAPAAIVDLKAAVRYLYFNDE VMPGDANKIISNGTSAGGALSALLGASGNSQDYLPYLTELGAADTRDDIYAVSSYCPITN LENADSAYEWMYNGVNTFSRMEFTRNTSAQEYNDRSLTHTTVQGSLTEDETKISNRLKNM FPSYLNNLKLKDDKGNLLTLDKNGNGTFKSYLSLIIKNSANKALEEGKDISEFKKAFTIE NGKVVAVDLDVYTHIGDRMKSPPAFDSLDASSGENNLFGDKRTDNKNFTKFSFDITNKEA IEYYRKGKFNDKSIKIVIPKMADKTIIKMMNPMNYIESAPTKYWRIRHGAIDKDTSLAIP AILAIKLKNSGKIVDFAAPWGQGHGGDYDLDELFNWIDTVVNK >gi|292606589|gb|ADGG01000021.1| GENE 272 239225 - 241045 2667 606 aa, chain - ## HITS:1 COG:FN0634 KEGG:ns NR:ns ## COG: FN0634 COG1217 # Protein_GI_number: 19703969 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Fusobacterium nucleatum # 1 604 1 604 605 1169 97.0 0 MKIKNIAIIAHVDHGKTTLVDCLLRQGGVFKTHELEKVEERVMDSDDIERERGITIFSKN ASARYKDYKINIVDTPGHADFGGEVQRIMKMVDSVLLLVDAFEGPMPQTKYVLKKALEQG HRPIVVVNKVDKPNARPEDVLYMVYDLFIELNANEYQLEFPVVYASGKAGFARKELTDEN TDMQPLFETILEHVQDPDGDVAKPTQFLITNIAYDNYVGKLAVGRIHNGTLKRNQDVMLI KRDGKQVKGKVSVLYGYEGLKRVEIEEAEAGDIVCVAGIDDIDIGETLADINDPVALPLI DIDEPTLAMTFMVNDSPFVGKEGKFVTSRHIWDRLQKEIQTNVSMRVEATDSPDSFIVKG RGELQLSILLENMRREGFEVQVSKPRVLFKEKDGKRLEPIELALIDVDDSFTGTVIEKMG VRKAEMVSMVPGQDGYTRLEFKVPARGLIGFRNEFLTDTKGTGILNHSFFDYEEYKGDIP TRNKGVLIATEPGVTVPYALNNLQDRGTLFLDPGIPVYEGMIVGEHNRENDLVVNVCKTK KLTNMRAAGSDDAVKLATPRKFTLEQALDYIAEDELVEVTPTNIRLRKKILKEGDRRKNW SALNNK >gi|292606589|gb|ADGG01000021.1| GENE 273 241068 - 241931 981 287 aa, chain - ## HITS:1 COG:FN0635 KEGG:ns NR:ns ## COG: FN0635 COG0130 # Protein_GI_number: 19703970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Fusobacterium nucleatum # 1 287 1 287 287 444 85.0 1e-125 MEGIILVNKPKGISSFDVIRKLKKILKTKKIGHTGTLDPLATGLMLICVGKATKLASDLE AKNKVYLANFEIGYATDTYDIEGKRIAENLIDISKDNLELSLKKFIGDIKQIPPMYSAIK IDGNKLYHLARKGIEIERPERDVTIEYINLLDFKDNKAKIETKVSKGCYIRSLIYDIGLD LGTYATMTELQRINVGEYSLTNSYTLEQMEEMAQNNNFSFLNSVEEVFSYDKYNLETEKE FTLFKNGNTVKIEDNLENKKYRVYYQDEFLGLANIENNNLLKGYKYY >gi|292606589|gb|ADGG01000021.1| GENE 274 242031 - 242732 714 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782299|ref|ZP_06747625.1| ## NR: gi|294782299|ref|ZP_06747625.1| chaperone HtpG [Fusobacterium sp. 1_1_41FAA] # 1 233 1 233 233 370 100.0 1e-101 MYSDNEELLYEDDYFQKAYFPYPEVKEIKYTITENEGEITIDFEFYKEDLILYVKGFKKY EKNSKFDIIKEISNSNRPNILPFHMEINIHKKAGELNEFILNQPKTINGLKLNEISMSEY DIEGNIIKNLNFKNEEIIVEYFYLANRIIAEVKTDKNGYTIKYYNWDRELIATAIFKDER TIKIYDLNNKLIMTEVVTDDGEILIYNENNKLIERVPLKNKNSNTSSKKHNQF >gi|292606589|gb|ADGG01000021.1| GENE 275 242939 - 243916 953 325 aa, chain - ## HITS:1 COG:FN0637 KEGG:ns NR:ns ## COG: FN0637 COG2849 # Protein_GI_number: 19703972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 152 325 1 172 172 162 58.0 1e-39 MRRKNFILTVLIFLFINILSMAVESTNFIMPNTNMTGSSTNFQEVLKDYKPNLENIDKIF NYIEKNIKEKGRAVFYSKLEKGKNEIIVTDENNNIIYTEKISEKLINVAPYFEAKEMYQL KEGKTFSYIDYRTEMLGKNVSIKSENLLKKKMNKKDAIEILNKLRDYNSFTKNSISNIEY AKSECYDEEGNLLFTMQIKDSKVITETQKTINENIIKMIYIVNDIDTDSGLMETYINGKL SAIMRMKNSLPNGEAKIFYPSGKLLSIFTLENGKTNGIVKVYYENGKIQAIHNFKDNVLN GEAIEYDENGNVVKKVLYKNGKIVR >gi|292606589|gb|ADGG01000021.1| GENE 276 243934 - 244179 380 81 aa, chain - ## HITS:1 COG:CAC0545 KEGG:ns NR:ns ## COG: CAC0545 COG4443 # Protein_GI_number: 15893835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 6 72 5 71 74 63 50.0 8e-11 MEDKELKFEVLNDLGTISESTKGWSKKLTHIIWNEDEPKYDIRAWDSEFKKMGKGITLTE KELRSLKDLIDKELEFLDSEK >gi|292606589|gb|ADGG01000021.1| GENE 277 244288 - 245004 857 238 aa, chain + ## HITS:1 COG:FN1185 KEGG:ns NR:ns ## COG: FN1185 COG0846 # Protein_GI_number: 19704520 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Fusobacterium nucleatum # 2 238 6 242 252 380 77.0 1e-105 MENKIEKLADIIKNSKHLVFFTGAGVSTESGLKSFRGKDGLYSSLYKGKYRPEEVLSSDF FCSHRKIFIEYVEEELNINGIKSNKGHLVLAELEKMGILKAVITQNIDDLHQMAGNKNVL ELHGSLKRWYCLSCGKTSNKNFSCDCGGIVRPDVTLYGENLNQDVVNEAIYQIEQADTLI VAGTSLTVYPAAYYLRYFRGKNLVIINNESTQYDGEASLVLKTNFADTMEKVLNIIKQ >gi|292606589|gb|ADGG01000021.1| GENE 278 245047 - 245469 482 140 aa, chain - ## HITS:1 COG:FN0893 KEGG:ns NR:ns ## COG: FN0893 COG1959 # Protein_GI_number: 19704228 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 140 1 140 140 223 92.0 7e-59 MKIKNEVRYALQIVYYLTLHRDKDIISSNEISAEENIPRLFCLRIIKKLEKAGVVKIFRG AKGGYVLTRDPKRLTFRDIIEIIDDDIVLQPCIDSSTICSTRGANCSIRLALKKIQDELL DDFDKINFHDLVEENTGLYV >gi|292606589|gb|ADGG01000021.1| GENE 279 245497 - 246228 1062 243 aa, chain - ## HITS:1 COG:FN0892 KEGG:ns NR:ns ## COG: FN0892 COG0560 # Protein_GI_number: 19704227 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Fusobacterium nucleatum # 1 243 5 247 247 430 91.0 1e-120 MIAAFFDIDGTIYRNALLIEHFKKMIKYELFKDIQYRLKVEEAYQLWDTRKGDYDDYLLD LAQLYVVAIKGLPLKYNDFISDQVLLLKGNRVYTYTREMIEWHKKEGHKVFFISGSPSFL VSRMAKKMGVDDFCGSVYEIDEETQTFSGKITKPMWDSVHKQEAIEDFIKKYDIDLSKSY AYGDTNGDYSMLSSVGNPRAINPSKELIQKIKSDENLKSKIQIIIERKNVIYKLDSNVEL IEF >gi|292606589|gb|ADGG01000021.1| GENE 280 246414 - 247274 1156 286 aa, chain + ## HITS:1 COG:no KEGG:FN0891 NR:ns ## KEGG: FN0891 # Name: not_defined # Def: DNAse I homologous protein DHP2 precursor (EC:3.1.21.-) # Organism: F.nucleatum # Pathway: not_defined # 9 286 2 279 279 444 83.0 1e-123 MQRSINLKKKLSLFIASVLMIFTMFSTISSADEAYIASFNILRLGAAEKDMVQTAKLLQG FDLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYVYKKDKVKFI KSEGFYKDGKSSLLREPYGATFKIGNFDFTLVLVHTIYGNNESQRKAENFKMVDVYDYFQ DKDKKENDILIAGDFNLYALDESFRPMYKHRDKITYAIDPAIKTTIGTKGRANSYDNFFF SQKYTTEFTGSSGALDFSEKDPQLMRQIISDHIPVFIVVETSKDDD >gi|292606589|gb|ADGG01000021.1| GENE 281 247274 - 247897 728 207 aa, chain + ## HITS:1 COG:FN0890 KEGG:ns NR:ns ## COG: FN0890 COG1564 # Protein_GI_number: 19704225 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Fusobacterium nucleatum # 1 207 1 207 209 257 71.0 1e-68 MKIAYLFFNGQLRGSKKFYSNLIEKQEGDIYCADGGANIAYQLNLIPKEIYGDLDSIKDE VKDFYAKKNVKFIKFNVEKDYTDSELVLNEIEKKYDKIYAIAALGGSIDHELTNINLLNR YSNLIFVSEKEKMFKIEKFYNFSNMKNKKVSFIIFSDKVKDLTLKGFKYDVENLDLTKGE TRCVSNIIEKNEARLTLKNGALLCVVK >gi|292606589|gb|ADGG01000021.1| GENE 282 247962 - 248345 658 127 aa, chain + ## HITS:1 COG:FN0889 KEGG:ns NR:ns ## COG: FN0889 COG5496 # Protein_GI_number: 19704224 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 1 127 1 127 127 183 81.0 7e-47 MLEVGMKYEIDRVVTENDTASKAASGSVEVLATPVMIAWMEEASLRLAQKELEEGLTTVG TEVNIKHLKGTLVGKTVKVLSTLKEIDRKRLVFDVEVIEDGVAVGTGSHTRFIIDTAKFY EKLKNTK >gi|292606589|gb|ADGG01000021.1| GENE 283 248402 - 249625 849 407 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 2 406 9 421 447 331 43 2e-89 MEKLSLQTKLVLGIQHVLAMFGATVLVPFLTGLNPSIALICAGVGTLIFHSVTKGIVPVF LGSSFAFIGATALVFKEQGIAILKGGIISAGLVYVLMSFIVLKFGVERIKSFFPPVVVGP IIMVIGLRLSPVALSMAGYANNTFDKDSLIIALIVVVTMISISILKKSFFRLVPILISVV IGYIVAYFMGDVDLSKVHEASWLGLPAGAWETITTLPKFTFTGVIALAPIALVVFIEHIG DITTNGAVVGKDFFKDPGVHRTLLGDGLATMSAGLLGGPANTTYGENTGVLAVTKVYDPA ILRIAACFAIVLGLIGKFGVILQTIPQPVMGGVSIILFGMIAAVGVRTIVEAQLDFTHSR NLIIAALIFVLGIAIGDITIWGTISVSGLALAALVGIVLNKILPEDK >gi|292606589|gb|ADGG01000021.1| GENE 284 249638 - 250117 671 159 aa, chain + ## HITS:1 COG:CAC2942 KEGG:ns NR:ns ## COG: CAC2942 COG1854 # Protein_GI_number: 15896195 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Clostridium acetobutylicum # 1 159 1 158 158 201 59.0 4e-52 MERIASFQVDHKKLNRGIYVSRLDEINGNYLTTFDIRMKLPNREPVINIAELHTIEHLGA TFLRNHPTRKDDIIYFGPMGCRTGLYLILKGKLESKEVVDLIKELFEFISKFEGDIPGAS AIECGNYLDQNLPMARYEAQKFLEETLNNIKEKNLVYPE >gi|292606589|gb|ADGG01000021.1| GENE 285 250148 - 251650 2087 500 aa, chain + ## HITS:1 COG:FN0998 KEGG:ns NR:ns ## COG: FN0998 COG0747 # Protein_GI_number: 19704333 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 500 1 500 500 897 90.0 0 MKKLVYVLMLVSLFLIGCGESKNESPNGNTVVIGQGAKPKSLDPHMYNSIPDLLVSRQFY NTLFSREKDGSIKPELAESYEYKNDKELDVVLKKGVKFHDGTELTADDVLFSFERMKEKP GSSIMVEEIDKVEKVDDYQIKILLKNPSSAMLYNLAHPITSIVNKKYVEAGNDLSIAPMG TGAFKLIAYNDGEKIELEAFKDYFEGAPKVEKITFRSIPEDTSMLAALETGEVDIATGMP PVSTQTIEANDKLELISEPTTATEYICLNVEKAPFDNKDFRVALNYAIDKKSIIDSIFSG RGKVAKSIVNPNVFGYYDGLEEYPYDVEKAKELIEKSGLKDAKFSLYVNDSPVRLQVAQI IQANLKDVGIEMTIETLEWGTYLQKTGEGDFLAYLGGWISGTSDADIVLYPLLDSKSIGF PGNRARYSNPEFDKEVEAARVALSPDERKEHFKNAQIISQNDSPLIVLYNKNENIGINKR VKRFEYDPTTMHKFKNLEIK >gi|292606589|gb|ADGG01000021.1| GENE 286 251715 - 252749 1472 344 aa, chain + ## HITS:1 COG:FN0999 KEGG:ns NR:ns ## COG: FN0999 COG1363 # Protein_GI_number: 19704334 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Fusobacterium nucleatum # 1 344 4 347 347 604 86.0 1e-173 MDIDLKYTLKKTVELLAIPSPVGYTHNAIEWVRKELESLGVKKYNITKKGALIAYVKGKD SDYKKMISAHVDTLGAVVKKVKKNGRLEVTNVGGFAWGSVEGEHVTIHTLSEKTYTGTIL PVKASVHVYGDVAREMPRTEETMEIRIDEDVKTDQDVFKLGILQGDFVSLDPRTRVLENG YIKSRYLDDKLCVAQILAYLKYLKDNKLKPRTDLYIYFSNFEEIGHGVSVFPEDLDEFIA VDIGLVAGEDAHGDEKKVNIIAKDSRSPYDYTLRKKLQEAADKNKIQYTIGVHNRYGSDA TTAILQGFDFKYACIGPNVDATHHYERCHNDGIVETIKLLIAYL >gi|292606589|gb|ADGG01000021.1| GENE 287 252920 - 255394 2947 824 aa, chain + ## HITS:1 COG:FN1122_1 KEGG:ns NR:ns ## COG: FN1122_1 COG1022 # Protein_GI_number: 19704457 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Fusobacterium nucleatum # 1 600 1 600 600 943 86.0 0 MQIVTDKNKVALYFKDNAVSYKEFILNTKKIKQYANIKEFTNNMIYMENRPELLYSFFSI WDSRATCVCIDASSTAEELSYYIDNSEVEKIFTSRGQLEKVEEAFTILNKKVELVIVDDI EFDKIKIDENIEANLVINSPEREDTALILYTSGTTGKPKGVMLTFDNILANVDSLDVYKM YEETDVTIALLPLHHILPLLGTGVMPLLYSATIVFLDDMSSVALIDAMKKYKVTMLIGVP KLWEVMHKKIMDTINSKGITRFIFKIAKKINSLSFSKKIFKKVSEGFGGHIKFFVSGGSK LNPQVTEDFLTLGIKICEGYGMTETSPIIAYTPKDDIMPNSAGRVIKDVEVKIAEDNEIL VKGRNVMKGYYKNPEATAEIIDKDGWLHTGDLGTLKDGYLYVTGRKKEMIVLSNGKNINP IDIEAKLISMTNLIAEVVVTEYNSILTAVIHPDFNKVKEEKVDNIYEVLKWSVVDKYNQK SPDYKKILDVKIVNEDFPKTKIGKIKRFMIADMLEGKIEKKERKPEPDFEEYNKIKKYLV TAKEKEVFFDSHIEIDLGMDSLDMVEFQHFLDLNFGVKEENLISKHPTLLELANYVKENR NQEKIGNLNWKEIINKDTDAKLPSSSFLAIILKFISCILFNTFFRVKVKGKEKIEMDKPT IYVANHQSFLDGFLFNYAVPSKLVKKTYFLATVAHFKSSIMKSFANSSNVVLVDINKDIA EVMQILAKVLKENKNVAIYPEGLRTRDGKMNKFKKAFAILAKELNVDIQPYVISGAYELF PTGKKFPKPGKISIEFLDKIKVEDLSYDEIVDKSYKAIEEKLTK >gi|292606589|gb|ADGG01000021.1| GENE 288 255490 - 257004 1634 504 aa, chain + ## HITS:1 COG:FN1121 KEGG:ns NR:ns ## COG: FN1121 COG4868 # Protein_GI_number: 19704456 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 504 1 506 506 946 94.0 0 MKIGFDHAKYLEEQSKYILERVNKHDKLYIEFGGKLLGDLHAKRVLPGFDENAKIKVLNK LKDQIEVIICVYAGDIERNKIRGDFGITYDMDVFRLIDDLRENELKVNSVVITRYEDRPS TDLFITRLERRGIKVYKHYATKGYPSDVDTIVSDEGYGKNAYIETTKPIVVVTAPGPGSG KLATCLSQLYHEYKRGRNVGYSKFETFPVWNVPLKHPLNIAYEAATVDLNDVNMIDPFHL EEYGEIAVNYNRDIEAFPLLKRIIEKITGKKSIYQSPTDMGVNRVGFGITDDEVVKEASQ QEIIRRYFKTGCDYKKGNTDLETFKRAEFIMHSLGLKEEDRKVVTFARKKLELLNNEEKS DKQKTLSAIAFEMPDGEIITGKKSSLMDAPSAAILNSLKYLSNFDDELLLISPTILEPII QLKEKTLKNKHIPLDCEEILIALSITAATNPMAELALSKLSQLAGVQAHSTHILGRNDEQ SLRKLGIDVTSDQVFPTENLYYNQ >gi|292606589|gb|ADGG01000021.1| GENE 289 257126 - 258343 1570 405 aa, chain - ## HITS:1 COG:FN1120 KEGG:ns NR:ns ## COG: FN1120 COG1866 # Protein_GI_number: 19704455 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Fusobacterium nucleatum # 1 405 123 527 527 786 92.0 0 MPSQNLFIHQLLIRTDEEYNENNEIDFTVISAPNFHCVPEIDGVNSEAAIIINFEKKMAI ICGTRYSGEMKKSVFSIMNYIMPHENILPMHCSANMDPVTHETAIFFGLSGTGKTTLSAD PNRKLIGDDEHGWCDTGVFNFEGGCYAKCINLKEESEPEIYHAIKFGSVVENVTMDEKTR KINYEDPSITPNTRVGYPIHYIPNAELAGVGGIPKVVIFLTADSFGVLPPISRLSQEAAM YHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAKMLGERLEKHNTKVYLIN TGWSGGAYGTGKRINLKYTRAMVTAVLSGYFDNAEYKHDEIFNLDIPQSCPNVPSEIMNP IDTWEDKEQYTIAAKKLANLFYKNFKEKYPNMPENITNAGPRYND >gi|292606589|gb|ADGG01000021.1| GENE 290 258349 - 258708 412 119 aa, chain - ## HITS:1 COG:FN1120 KEGG:ns NR:ns ## COG: FN1120 COG1866 # Protein_GI_number: 19704455 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Fusobacterium nucleatum # 1 102 1 103 527 174 79.0 3e-44 MMMYGLEKLGIANVLAVHYNLSPAELTEKALANGEGKLNDTGALVIETGKYTGRAPDDKF FVDTPSVHKHIDWSRNKPIEKEKFDAILGKLIAYLQKKKFMFLMERLELILNIQEDFVL >gi|292606589|gb|ADGG01000021.1| GENE 291 259032 - 259316 489 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237740609|ref|ZP_04571090.1| LSU ribosomal protein L27P [Fusobacterium sp. 2_1_31] # 1 94 1 94 94 192 100 1e-47 MQFLLNIQLFAHKKGQGSVKNGRDSNPKYLGVKKYDGEVVKAGNIIVRQRGTKFHAGNNM GIGKDHTLFALIDGYVKFERLGKNKKQVSVYSEK >gi|292606589|gb|ADGG01000021.1| GENE 292 259317 - 259646 484 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197736146|ref|YP_002164924.1| possible ribosomal protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 109 1 109 109 191 87 4e-47 MTKVEIFRKNGNIIGYKASGHSGYSEQGSDIICSAISTSLQMTLIGIQEVLKLKVDFKIN DGFLDVDLKNISQDKLTQTNILTEAMAIFLKELTKQYPKYIRLVEKEDK >gi|292606589|gb|ADGG01000021.1| GENE 293 259650 - 259961 501 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237740607|ref|ZP_04571088.1| LSU ribosomal protein L21P [Fusobacterium sp. 2_1_31] # 1 102 1 102 103 197 99 4e-49 MYAVIKTGGKQYKVTEGDVLRVEKLNAEVNATVELTEVLLVAGGDNIKVGKPLVEGAKVV VEVLSQGKAAKVINFKYKPKKASHRKKGHRQLFTEVKVTSIIA >gi|292606589|gb|ADGG01000021.1| GENE 294 260195 - 261016 1256 273 aa, chain + ## HITS:1 COG:FN1263 KEGG:ns NR:ns ## COG: FN1263 COG4822 # Protein_GI_number: 19704598 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Fusobacterium nucleatum # 1 273 11 283 283 484 92.0 1e-137 MSKKALFMVHFGTTHNDTRELTIDKMNKKFADEFKDYDLFTAYTSRIVLKRLKDRGENYS TPLRVLNALTDQGYEELLIQTSHVIPGIEYENLVREVNSFSNKFKTVKIGKPLLYYIDDY KKCVEALADEYVPKNKKEALVLVCHGTDSPLATSYAMIEYVFDEYGYDNVFVVCTKAYPL MDTLIKKLKKAGIEEVRLAPFMFVAGEHAKNDMAVTYKEELEENGFKVNKVILKGLGEFD AIQNIFLNHLKLAIEKDDEDIADFKKEYTEKYL >gi|292606589|gb|ADGG01000021.1| GENE 295 261086 - 262711 1349 541 aa, chain - ## HITS:1 COG:no KEGG:FN0289 NR:ns ## KEGG: FN0289 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 290 540 53 306 308 142 41.0 3e-32 MERKEIKLNHFNFYSIIAIIALIYFSIKCIQFYLVVEIPKEIWEIITTEKKLFISNESNL AAKLMANFFILLSIFLPPFLVYLFVKKIYIICNYFLSEEKIIISDEHFYYTRKLAMINFE KFEINLNEIKRISKILMKAPVRISTNIPALAILWYFNEQKRILIKDKNGKEYKIWNIPAK KFSPSTYYRTPKDGVDLYIKELKEYLKLEEENIEDDQETESLNVEMKKLIYSHPDLSEKK KSFFILFFAQLFFTLIFLVVFSEGITVLYEGGIEILFFIIMGIACIIISYLLIKAMKNAI IYFFPYEEYEIIDDKLHYKKKLKLFGKSFVMEKFDVSLKDIESISSLAPKSSYLGIKSID DFKPSKRIHISLKNGEGYDVCNWRKMSYDYVDFYGDINKVLEIEFKEVFNKIKFFIENGE KKYNFETQLDETKSNYNLKKSERYNFILNKIIEEEKLYLYKDEEKFIVNAGELAIKNLAI FKTMNFEEIDFYVFYVDYLSKKEYEKKIVLVGFNGVDGKEVTMLKLKNDINEIRDSKSTF I >gi|292606589|gb|ADGG01000021.1| GENE 296 262735 - 263538 995 267 aa, chain - ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 13 265 32 284 286 138 36.0 1e-32 MEKKEIDLKNFEDEYMIKVKGGKYIPSFSNELKEVFDIEVCKYPTTQLIWLEVMENNPSE VKALYKPVETVNWWQALEFCNKLSEKYGLEPVYDLSRSEQEILMIKELGKKIVSPEKANF KNTEGFRLPTEVEWEWFAKGGQKAIEQGTFECKYSGSNNIDEVAWYLNNSDFKNTNISIK DVALKKSNQLGLFDCSGNIWEWCYDTIGDIENGKLYTYKTFEPYNIYRRIKGGSGAYSAK SSLIISRSETIATYSYKNFGFRIVRTI >gi|292606589|gb|ADGG01000021.1| GENE 297 263550 - 264074 392 174 aa, chain - ## HITS:1 COG:no KEGG:FN0167 NR:ns ## KEGG: FN0167 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 71 3 74 76 79 66.0 7e-14 MEIEIKEKIDSLEITKNCKHELRKNSIISFCIIILVYSVFIYNNPFFFFIPLFTIHFVFL FYNFMCREYKYERISINFKELAFSSSYFKKNFELCYKKIFLVENIKEIEIIEYHKLLLRK ILFKDKLEDKPSYVISFSFFEGENLNFAYSMEKNESRRVLRRIKSFLEKEKIYS >gi|292606589|gb|ADGG01000021.1| GENE 298 264089 - 264454 279 121 aa, chain - ## HITS:1 COG:no KEGG:FN0166 NR:ns ## KEGG: FN0166 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 121 1 121 121 82 70.0 5e-15 MELIILTSISIILIVFLVLSFINEHLGFEKFNLKSKITTSIIILLIVNLIYFFDSYHEDD IILSSNIIIVGIDILFVLSNFFLLIFKRKGFHFIFFLLGLLFLILPFFSIMMFALRGLPH G >gi|292606589|gb|ADGG01000021.1| GENE 299 264468 - 264752 451 94 aa, chain - ## HITS:1 COG:no KEGG:FN0165 NR:ns ## KEGG: FN0165 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 20 94 1 75 75 117 96.0 1e-25 MLEEKLLKKLKTINENFINLGFDLEEDLVELVSQREDIKDRIENTKYKKMTFSKDEEANS YILNLEDCQISFDIIEGEDEEGPWFEVECNIIFF >gi|292606589|gb|ADGG01000021.1| GENE 300 264780 - 265556 918 258 aa, chain - ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 8 256 32 284 286 132 32.0 7e-31 MELQKFKDEYMVKVKGGIYKPSFEDKEKVVFDIEVCKYPVTKKMWLDIMGEISLETERNN KPAENTTWWKALEFCNKLSEKYDLEPVYDLSKSKQGILAIRELKGKTIKTVDPKMANFKS TEGFRLATEIEWEWFARGGQVAIEQGTFDYNYSGSNDIDEVAWYVENSNYSLQDVGLKKP NQLGLFDCSGNIWEWCYDTEEMENIKSLHFNFDPSSAYRRIRGGSWLHSAESCATFYRIF ETAAYVVLNTGFRIVRTI >gi|292606589|gb|ADGG01000021.1| GENE 301 265637 - 268882 4137 1081 aa, chain - ## HITS:1 COG:FN0163 KEGG:ns NR:ns ## COG: FN0163 COG0646 # Protein_GI_number: 19703508 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I (cobalamin-dependent), methyltransferase domain # Organism: Fusobacterium nucleatum # 8 315 1 308 309 553 89.0 1e-157 MFEFEKELRERILVLDGAMGTVLQKYELTPEDFNGAKGCYEILNETRPDIIFEVHKKYIE AGADIIETNSFNCNAISLKDYHLEDKVYDLAKKSAEIARDAVKQSGKKVYVFGSIGPTNK SLSFPVGDVPFKRAVSFDEMKEVIKVQVAGLIDGGVDGILLETIFDGLTAKAALLATEEV FEEKNVKLPISISATVNRQGKLLTGQSMESLIVALDRDSVTSFGFNCSFGAKDLVPLILK IKELTTKFVSLHANAGLPNQNGDYVETAQKMRDDLLPLIENQAINILGGCCGTNYDHIRA IAELVKDQKPRVLPEENLLETCLSGNEIYNFNDKFTCVGERNNISGSKLFRTMIEEHNYL KALEVARQQIDAGAKVLDINVDDGILDSVEEMKNFLRVLQNDSFIAKVPIMIDSSDFAVI EEGLKNTSGKAIVNSISLKEGTEEFLRKAKIIRKFGASIIVMAFDEKGQGVSAERKIEIC QRAYDLLKSIGVKNSDIVFDPNILSVGTGQEADRYHAREFIKTIDYIHENLKGCGVVGGL SNLSFAFRGNNVLRAAFHHIFLEEAVPRGFNFAILNPKEKAPQWTDDEREKIKSFIFGES TDMEALLSLNLIKRKEEAQIFAETPEDKIRKALIQGGSESLQEVIGDLLKKYKALEILEN ILMSAMQEIGRLFEQGELYLPQLIRSASVMNNCVDILTPYLDKVDKTSSKGKILMATVDG DVHDIGKNIVGTVLECNGYEVIDLGVMVPRDKIVEKAKEINADVVTLSGLISPSLKEMER VADLFQKVGMQVPILIAGAATSKLHTGLKVLPNYDYSLHVTDAMDTITVVSQLLSTKRKD FIETKQNQLRKIAKRYIDNNNETEEKKVFPEVKKTVSYIPKVLGKQFLSLPVEIFKDTLK WDIALYALRVKNTPEEEKTLNDLKKIYEKLIEEKVEFRAAYGYFRCKKTETFLEMEGMTF EVSPNLAQYIEKEDYVGGFVISVGSKIFKDDKYLGLLETLLCNAIAETASEYMETRVSED IVPTFLRPAVGYPILPDHSLKKVVFDLIDGERTGAKLSPAFAMTPLSTVCGFYLCNDNAK Y >gi|292606589|gb|ADGG01000021.1| GENE 302 269059 - 269925 1063 288 aa, chain - ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 15 282 5 271 282 241 47.0 2e-63 MKIADIYKGKSLTTSFEVFPPNDKVGLDQVYNCLDVLSLEKPDYISVTYGAGGNTKGRTV EIADRIKNQNGVESVAHLTCIGAKKEEIDRVLEDLEKHNIENILALRGDYPVGRELEVGD FSYARDLINYIHEKKSDKFSIGAAYYVEGHRETNDLLDLFHLKEKVNAGVDFLISQIFLD NEFFYSFRDKLEKLQINVPLVAGIMPVTNAKQIKKITSLCSCTIPKKFLKILEKYEDNPS ALKEAGLAYAIEQVVDLVASDINGIHLYTMNRPETAKKIIDATGIIRK >gi|292606589|gb|ADGG01000021.1| GENE 303 270127 - 271467 1596 446 aa, chain - ## HITS:1 COG:FN0162 KEGG:ns NR:ns ## COG: FN0162 COG0534 # Protein_GI_number: 19703507 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 446 1 446 446 725 90.0 0 MNNSSNVGRKTLFALTMPIFLELLLVTIVGNIDTIMLGYYSDEAVGAIGGITQLLNIQNV IFSFINMATSILTAQFLGAKDYKRVKQVISVSLVLNILLGLILGGIYLFFWKSLLQRMNL PTELVNIGKYYFQMVGGLCIFQGIILSCGAILKSHGRPTETLIINVGVNILNIIGNAFFI FGWLGMPVLGPTGVGISTVISRGIGCVVAFYMMCKYCNFTFKKKYIKPFPFNIVKNILSI GLPTAGENLSWNVGQLMIVAMVNTMGTTIITSRTYLMLIASFIMTLSIALGQATAIQVGH LVGAGEVDKVYTKCLKSVKIAFIFAFLTTSIVCVFRKPIMSIFTTNPDILKASLKIFPLM IILEMGRVFNIVIINSLHAAGDIKFPMFMSISFVFLIAVLFSYLFGISLGWGLVGIWIAN AMDEWIRGLAMYFRWKSKKWQNKSFV >gi|292606589|gb|ADGG01000021.1| GENE 304 271531 - 272277 1000 248 aa, chain - ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 10 219 33 258 286 137 37.0 1e-32 MKKLEDFQKEYMIFVRGGKYKKKVFNLEVCKYPVTQSMWENIMGYNPSGFKGVNKPVEIV NWWEVLKFCNKLSEKYNLKPVYDLSQEEKGILKIIHLDGEIVEEDKSDFKKTEGFRLPTE AEWEWFARGGQKAIDEGTFDYKYSGSNNIDEVAWYYENSGAKNKEGRTQNVGLKEANQLG LYDCSGNVWEWCYDMPDDESIEDGIVYRKLKGGAWISNLELCQNFFCTTENAIFEDVDIG FCIVRTIH >gi|292606589|gb|ADGG01000021.1| GENE 305 272610 - 274616 1693 668 aa, chain + ## HITS:1 COG:FN0198 KEGG:ns NR:ns ## COG: FN0198 COG3711 # Protein_GI_number: 19703543 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Fusobacterium nucleatum # 9 665 1 658 660 777 77.0 0 MLKKQHFEILKIIENERKLSKVAELLNLTERSVRYKIDEINEELGSKKIEIKKREFFSSV TENDMDKLFENIEESNYIYSQKEREELIILYTLMKKDNFLLKELADKLSTSKSTIRNDLK NLKKILLEYNIKLLQDDKLKYYFDYSEEDYRYFIAVYLYKYVSFDKKYDKIFFADLSYFR KIIYKEIKEEYINEIDSISKRIKKAELDFMDETLNILVILMLISKKREEKNSNLILDNIE ILEKREEYTQLKKNFSDFSNTNLLFFTDYLFKISRDEKDVFIKFRNWLDITVAVIKIVRA FEIESKTNLKNVDVFLDEIFYYIKPLIFRTKRKIKLKNSILRDVENLYPLIFNFLKKNFY YLEDIIEEKVSEEEIAYLVLFFHKALQNNNKMNKKAVLVTTYKENIALFLKEDIETEFLV DIDKILTLKNFEQIKDQLNDYDYILTTFNVEEDFMKEIKLAKVIELNPILTEKDIKKLED SGLIKNKKIKMTNLLKVILENSSEVNVKNLIHNLDEAFPEKIYNDIDRNKFSIANFLKEE NIFRTNLDSFEKILNKFFSSSFLQKNDINDIINKASNNNFYTYLGFKTAIIFHKFNTKKK QDGMIIAVNEKELYINSQKINTIILINSTCEIKFRGIIYNFVKLFFQNNDFNFDEQTDIY NFLITMDN >gi|292606589|gb|ADGG01000021.1| GENE 306 274726 - 275055 409 109 aa, chain + ## HITS:1 COG:no KEGG:FN0199 NR:ns ## KEGG: FN0199 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 109 1 100 100 96 71.0 2e-19 MWTSDTMTLSESIITFLIGFSIVFAALIALALFIIISSKVINALVKEEEVVAPKPVANVS NNNANTASAKAVAEKDNQEAENLAVIISAISEELREPVENFTIISVTEI >gi|292606589|gb|ADGG01000021.1| GENE 307 275095 - 275499 670 134 aa, chain + ## HITS:1 COG:FN0200 KEGG:ns NR:ns ## COG: FN0200 COG0511 # Protein_GI_number: 19703545 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Fusobacterium nucleatum # 1 134 1 134 134 157 86.0 6e-39 MKYVVTVNGKKFEVEVEKVGGAGKSLSRQPAERRETVKSEPVVETKAAVAPAPVEAAPAA TTTGGTTITSPMPGTILDVKVNVGDKVKYGQTLAILEAMKMENDIPATGDGEVAEIRVKK GDAVETDAVLIVLK >gi|292606589|gb|ADGG01000021.1| GENE 308 275514 - 276656 1762 380 aa, chain + ## HITS:1 COG:FN0201 KEGG:ns NR:ns ## COG: FN0201 COG1883 # Protein_GI_number: 19703546 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Fusobacterium nucleatum # 1 380 1 375 375 558 95.0 1e-159 MNFFNVLAELLEASGFAALTWQNLAMILVSFVLFYLAIVKKFEPLLLLPISFGMFLVNLP LAGLMNEGGVDKGGIIYFMSYGVKSNLFPCLVFMGVGAMTDFSPLIANPISLLLGAAAQL GIYVAFIFATQIGFTPAEAAAIGIIGGADGPTSIYIANNLAPHLLAPIAVAAYSYMALIP LIQPPIMKALTTKKERAVKMGQLRKVSKTEKIVFPIAVVLFCSLLLPSVAPLLGLLMMGN LFKESGVVQRLSDTAQNAMINIITIMLGLSVGAKADGSTFLDVSTLKIIAMGLAAFCFST AGGVLLGKLLYIVTGGKINPLIGSAGVSAVPMAARVSQTVGAKENPTNFLLMHAMGPNVA GVIGSAVAAGFFMMIFKGTM >gi|292606589|gb|ADGG01000021.1| GENE 309 276766 - 277731 1514 321 aa, chain + ## HITS:1 COG:FN0202 KEGG:ns NR:ns ## COG: FN0202 COG1788 # Protein_GI_number: 19703547 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Fusobacterium nucleatum # 1 321 1 321 321 640 95.0 0 MSKVMSLHDAIAKYVESGDSLCFGGFTTNRKPYAAVYEIIRQGQTDFIGYSGPAGGDWDM LIGCGRIKAFINCYIANSGYTNVCRRFRDAVEKKHNLLLEDYSQDVIMLMLHASSLGLPY LPVKLMEGSDLEYKWGISAEIRKTIPKLPDKKLERIPNPFKEGEDVIAVPVPRLDTAIIS VQKASINGTCSIEGDEFHDIDIAIAARKVIVIAEEIVTEEEIRKDPSKNSVPEFCVDAVV HAPYGCHPSQLYNYYDYDPAFYKMYDSVTKTDEDFEKFIQEWVIDVKDHDGYLAKLGLPR VSKLRVVPGFQYAAKLVKDGE >gi|292606589|gb|ADGG01000021.1| GENE 310 277734 - 278537 1288 267 aa, chain + ## HITS:1 COG:FN0203 KEGG:ns NR:ns ## COG: FN0203 COG2057 # Protein_GI_number: 19703548 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Fusobacterium nucleatum # 1 267 1 267 267 531 97.0 1e-151 MAKNYKNYTNKEMQAITIAKEIKDGQIVIVGTGLPLIGATVAKNKFAPNCKLIVESGLMD CSPIEVPRSVGDLRLMGHCAVQWPNVRFIGFETNEYLNGNDRMIAFIGGAQINPYGDLNS TIIGDDYVKPKTRFTGSGGANGIATYSNTVIMMQHEKRRFIEKIDYVTSVGWAGGPGGRE KLGLPGNRGPLAVVTDKGILRFDEVTKRMYLAGYYPGVTIEDIVENTGFELDTSRAVQLE APTEEIIKMIREDIDPGQAFIKVPVEE >gi|292606589|gb|ADGG01000021.1| GENE 311 278553 - 280307 2596 584 aa, chain + ## HITS:1 COG:FN0204 KEGG:ns NR:ns ## COG: FN0204 COG4799 # Protein_GI_number: 19703549 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Fusobacterium nucleatum # 1 584 1 584 584 1135 96.0 0 MNYSMPKYFQNMPQVGNSLANIDEANENAVREVEAAIAESIAAMQDAGTPDEKIHDKDQM TALERIAELVDEGTWYPLNTLYNPEDFETGTGIVKGLGRIGGKWAVVVASDNKKIVGAWV PGQADNLLRASDTAKCLGIPLVYVLNCSGVKLDEQEKVYANRRGGGTPFFRNAELQQLGI PVIVGIYGTNPAGGGYHSISPTILIAHKDANMAVGGAGIVGGMNPKGYIDMEGAIQIAEA TMAAKQVEVPGTIHVHYDKTGFFREVYDDEIGVIDGIKKYMDYLPAYDLEFFRVDEPTEP ALDPNDLYSILPMNQKKIYNIYDIIGRLFDNSEFSEYKKGYGPEVVTGLAKVDGLLVGVV ANAQGLLMNYPEYREKAVGIGGKLYRQGLIKMSEFVTLCSRDRLPIVWLQDTSGIDVGNP AEEAELLGLGQSLIYSIENSHVPQIEITLRKGSAAAHYVLGGPQGNNTNAFSLGTAATEV YVMNGETAASAMYSRRLAKDHKAGKDLQPTIDKMNQLINEYTAKSRPAYCAKTGMVDEIV PLYDLRGYISAFANAVYQNPKSICAFHQMILPRAIREFETYTKK >gi|292606589|gb|ADGG01000021.1| GENE 312 280433 - 281692 1529 419 aa, chain + ## HITS:1 COG:FN0205 KEGG:ns NR:ns ## COG: FN0205 COG0786 # Protein_GI_number: 19703550 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 1 418 1 418 419 637 89.0 0 MEELKVLKLDMFTTLMLSVLAIYFGEFLRKIFPVLKKYCLPASVVGGTVFALLSLLLFKM GIVQLDFDYKAVNQLFYSIFFAASGAAASMALLKKGGKLVVIFAILAAVLAAFQNAVALA VGKFMNIDPLISMMTGSIPMTGGHGNAASFAPIAVDAGAPAAMEVAIAAATFGLISGCML GGPFGNFLVKRFKLDEKSTEKEVMNEIDAEGESGNLLVDKPNIIQAVFLMCIAIGIGKII ELALKSVQDSTGWKVALPIHVCCMFAGIVIRLIYDRKQGNHEVLYESIDIVGEFSLALFV SMSIITMKLWQLSGLGLALVALLIAQVILIVIFCYFLTFKLLGKNYDAAVMAVGHMGFGL GAVPVSMTTMQAVCKKYRYSKLAFFVVPVIGGFISNLTNAMIITKFLNFAKDLHAVWIG >gi|292606589|gb|ADGG01000021.1| GENE 313 281723 - 282517 1051 264 aa, chain + ## HITS:1 COG:FN0206 KEGG:ns NR:ns ## COG: FN0206 COG1924 # Protein_GI_number: 19703551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 2 264 3 265 265 478 97.0 1e-135 MSIFTMGIDVGSTASKCIILKDGKEIVAKAVISVGTGTSGPARAMKEALDQIGLSSVTEL QGAVATGYGRNSLAEVPAQMSELSCHAKGAYFLFPNVHSIIDIGGQDSKALKIGDNGMLE NFVMNDKCAAGTGRFLDVIAKVLEVNLEDLEKLDEKSTVDVAISSTCTVFAESEVISQLA KGTKIEDIVKGIHTAIASRVGSLAKRIGIKDDVVMTGGVALNKGMVRALERNLGFKLHTN EYCQLNGAIGAALFAYQKYTMTHQ >gi|292606589|gb|ADGG01000021.1| GENE 314 282638 - 283963 1889 441 aa, chain + ## HITS:1 COG:FN0207 KEGG:ns NR:ns ## COG: FN0207 COG1775 # Protein_GI_number: 19703552 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 2 441 3 442 442 894 97.0 0 MGKMEKLPNKTPRPIEGHKPAAAILRGVVDKVYANAWEAKKRGELVGWSSSKFPIELAKA FDLNVVYPENHAASAAAKKDGLRLCQAAEDMGYDNDICGYARISLAYAAGEPTDARRMPQ PDFLLCCNNICNMMTKWYENIARMHNIPLIMIDIPFSNTVDVPEEKIDYLVGQFNHAIKQ LEELTGKKFDEKKFEDACARANRTAAAWLKSCKYMGYKPSPLSGFDLFNHMADIVAARCD EEAAMGFELLAEEFEQSIKEGTSTWEYPEEHRILFEGIPCWPGLKPLFEPLKDNGVNVTA VVYAPAFGFRYENVREMAAAYCKAPCSVCIETGVEWRETMAKENGISGALVNYNRSCKPW SGAMPEIERRWKEDLGIPVVHFDGDQADERNFSTEQYNTRVQGLVEIMQERKEERLANGE EVYTNFENTKETDWSKETIKH >gi|292606589|gb|ADGG01000021.1| GENE 315 283985 - 285133 1541 382 aa, chain + ## HITS:1 COG:FN0208 KEGG:ns NR:ns ## COG: FN0208 COG1775 # Protein_GI_number: 19703553 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 1 382 1 382 382 730 95.0 0 MAEIKELLEQFKYYAENPRKQLDKYLAEGKKAVGIFPYYAPEEIVYAGGMVPFGVWGGQG PIEKAKDYFPTFYYSLALRCLEMALDGTLDGLSASIITTLDDTLRPFSQNYKVSAGRKIP MVFLNHGQHRKEEFGKQYNARIFRNAKEELEKICDVKITDENLKNAFKVYNDNREEKRRF IKLAAKHPQSIKASDRSNVLKSSYFMLKDEHTALLRKLNQELEAIPEEQWDGVRVVTSGV ITDNPGLLEVFDNYKVCVVADDVAHESRALKVDIDLSIADPMLALADQFARMDEDPILYD PDIYKRPKYVLDLVKENNADGCLLFMMNFNDTEEMEYPSLKQAFDAAKVPLIKMGYDQQM VDFGQVKTQLETFNELVQLSRF >gi|292606589|gb|ADGG01000021.1| GENE 316 285143 - 285736 750 197 aa, chain + ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 46 168 547 673 1734 73 37.0 3e-13 MDQNIWEYDDFIFKGDELKGMTAKGKDKVKAGGQTDLVIPAVTPDGLALKKIADNAFYRR GLTSVVIPDTVESIGYDAFGVCKLKEVKLPEALVNIEGFAFYRNKLTKVEFGSKVKRIEP SAFAMNELSEITLPETLEYIGASAFYKNAFETITFPKALTKIDMYAFRKNNIHKVQVANS VDLHKFAFESFTTVERV >gi|292606589|gb|ADGG01000021.1| GENE 317 285791 - 286387 680 198 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0573 NR:ns ## KEGG: Lebu_0573 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 195 1 195 205 228 68.0 9e-59 MNFLGHSLISLEIDENTNKKTLYANFTGDYYKGLVDRIELPEALKKGITLHRTIDKISDR KENFLNELLVDKFGIFKGIVSDMFIDHFLSKNFHKLFNKDIKFIEKKILNTIEENRNIFP KDFDRMFKWLNDRNVMSNYKDIDFLERAFEGLARNIRKGEILNLATTELKKNYNLFEEKS IKEFFYVKDKSIEEFLNK >gi|292606589|gb|ADGG01000021.1| GENE 318 286623 - 287366 1059 247 aa, chain + ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 11 211 33 254 286 135 37.0 5e-32 MKKNTEILEIENMIFVRGGKYKSLFLNKEREVCDLEVCKYTITQNMWIEIMGNNPSYHIG GRKPVEQISWWDTLEFCNEMSKKYHLEPVYNITYDNFDNPILKINQIGGKAVEVNKADFK KTEGFRLPTEIEWEWFARGGEVAKEQGNFDYDYSGSDNIDEVAWYWGNSKEGTQDVGMKK ANQLGLYDCSGNVWEWCFKTGDCYMLKGGSFYDFNEFCLVNNRDRDTTPNRKEGNIGFRI VRTKNKE >gi|292606589|gb|ADGG01000021.1| GENE 319 287371 - 289149 2958 592 aa, chain + ## HITS:1 COG:no KEGG:Alvin_1447 NR:ns ## KEGG: Alvin_1447 # Name: not_defined # Def: hypothetical protein # Organism: A.vinosum # Pathway: not_defined # 103 447 82 435 529 75 26.0 6e-12 MFSLRGSRKRKTEKIIQKFLKSYAENEKSQEKKDLKTWLIIELQNELPNKKEEDIEKIAT ELIEGIEVYYTKKKEVEKYQSLGITNGDYVGNEILEKVANEIEEAEIVDTKEVIEAMQEA SNILSQFNEAMIYETATIKEPQLVANILSTNSVNNYVDTINTAIGNANKATIESITTKAG TINQNPNLDGFIFEEYHAGTFNVDATVKQKPYYAEALKPELGETYGKNSIDIVIEDSGKY VKKYSAKAYKNANETAKSFYDKITGYKYKFQSKLVPTDQTKEIVNSVDKIKFDNVESKGI TKTEIKNIQSELQSGNKKTDIFSFKKDVNTISISKQIGKQAMVNGTMGLGIGMVANIGAN IITGKGLEAEEVIEAGIKTGASMGMATAVAGGIRVAVEKKVIPTVFSRVLTNNTIGAIAA VSMDIIGTAFKLGSGEISLGKAVKDIGKSVGAAYGAIVASGWGYAGGMAIAGMIGLGTIG AVGTILGVGVAVVAGAVCATVGSKVAGAIASGIGAVAGTIVDGAVGIVKAGKEVVKSVAS GVWNGVKAVGGAIVGGATAIVKGVGSAIGSIASGIGSAVSSFCSGVASFFGW >gi|292606589|gb|ADGG01000021.1| GENE 320 289188 - 291488 3200 766 aa, chain + ## HITS:1 COG:all4296 KEGG:ns NR:ns ## COG: all4296 COG0464 # Protein_GI_number: 17231788 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Nostoc sp. PCC 7120 # 9 508 11 501 503 288 33.0 2e-77 METNLVKYLRARRPIIWVNNGDYKEIDTIIKEATKEYEDKSIYEYRALGAVDFETKVKEE RITDLYSFLDILYSEGIKRNIFLLIKNVEEEMKDARNIAYIKKIAETRYSSPDYNFTIIV ITETETVPKELEKFTSILDIPNMSKDEIEKYILKFSKDNNIKVDEKDIGEVAISLKGLTK LEIDHVLNMIIESKNNISISGRDIIIKEKGQIIKKSSILEIIDFKEKIEDIGGLEGLKEW LKSKAQVFRRLDEAKKFGVDTPKGVLLVGMPGCGKSLAAKASARLFNVPLLRLDIGRLLG KYVGESEHNMRVALKTAESISPCILWIDEIEKAFAGINQDGGASDITKRLFGQFLTWLQE KENTVFVVATANDITAFPPEFLRKGRFDEVFFIDFPNEEERERIFEIHLEKRGKLTDDID INKLAKQTEGYCGADIEEVVKNAIEDIFILETENEKEITTKDLLESAKNIDSLTNILADK IEILKKSYDKFKIKSASKKLPSTQRIKKNKKGKSGNPTFRDMVIINGGKYTPSFFNEERE VFDIEVCKYPVTQDMWMEVMEKNPSSCKGGRRPVESVSWWDALEYCNKLSEKYDLEPVYD LSKKEEGVLRINQIGGESEYPNIADFRKTEGFRLPTKLEWEWFARGGEIAVQDGTFNYTY SGSNNIDEVAWYEKNSGKQTHDVGTKKPNQLGLYDCSGNVWEWCYDTSTSGYISEETSYI YDATVEYRIIRGGSYYEYDYCVVTLNLGREDVDYSSDLGFRIVRTI >gi|292606589|gb|ADGG01000021.1| GENE 321 291585 - 292457 986 290 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782344|ref|ZP_06747670.1| ## NR: gi|294782344|ref|ZP_06747670.1| hypothetical protein HMPREF0400_00313 [Fusobacterium sp. 1_1_41FAA] # 1 290 1 290 290 417 100.0 1e-115 MSEDKKLKEEFCVYFNISSNLEEEKLLHRYEMFIRDIKRTLKDNNFNEYELNLEANNISI NILNNTLKEIANILKCLADIQIMAIEKYKFLLKGVVEYNKKDLADSFEEKEFNYPLIMLG DSIKKTNKAIVEDFSQSLIKIFDEYYIDYLSVYYENNNEDDFFNIMLKHKKFIKERLKEN SKEFYKATSISGKRILEEQFFYEEPKILEKISQYKVLYNKERDDKYINAVLEFEKEFPNF KENGEKLLKIREKYLYLLNYHKKIVFSLIKFGVYKEDRRSKCSINLEEII >gi|292606589|gb|ADGG01000021.1| GENE 322 292584 - 292802 482 72 aa, chain + ## HITS:1 COG:no KEGG:FN0210 NR:ns ## KEGG: FN0210 # Name: not_defined # Def: CopG family transcriptional regulator # Organism: F.nucleatum # Pathway: not_defined # 1 72 1 72 72 108 97.0 4e-23 MGTTATLRLDETEKAIIQDYASSKGMTMSEFMKKVVLDYIEDEYDLKIYKEYLKEKENGT LKTYSHKEVWGE >gi|292606589|gb|ADGG01000021.1| GENE 323 292810 - 293076 346 88 aa, chain + ## HITS:1 COG:FN0211 KEGG:ns NR:ns ## COG: FN0211 COG2026 # Protein_GI_number: 19703556 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 1 88 1 88 88 148 93.0 2e-36 MKYNVEYSKTAMNTIKKMDSSTSKLIRTWIEKNLIDAENPRVKGKALTGDLKGLWRYRVG DYRILADIQDDKIVILILDIGHRSKIYL >gi|292606589|gb|ADGG01000021.1| GENE 324 293196 - 294686 1946 496 aa, chain + ## HITS:1 COG:FN0977 KEGG:ns NR:ns ## COG: FN0977 COG1492 # Protein_GI_number: 19704312 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Fusobacterium nucleatum # 1 496 1 496 496 833 91.0 0 MKKANLMVVGTSSGAGKSLFVTALCRIFYKDKYKVSPFKSQNMALNSYITKDGKEMGRAQ VVQAEASGLEPEVEMNPILLKPSSMNKIQIIVCGKSIGNMSGVEYNQYKKNLIPILKETY SKIEAKNDIVIIEGAGSPAEINIKEEDISNFVMARIADAPVILVADIDRGGVFASIYGTI MLLKEEDRKRVKGIVINKFRGNKEVLKPGFEIIENLTGVKTLGVIPYADIDIEDEDSLSE KYKSFKLNKNSNKIKVSVIKLKHISNVTDIDALSIHDDVEIQFVTERSQIGDEDLIIIPG SKNTIDDLKWLKESGIAEEIIKKARTKTIIFGICGGFQILGNKVKDPHHIEGDIEELNGL GLLDLETTMENEKTLVQYKGKLIVEEGLLKPLNDLEIKGYEIHQGLTEGNEKNLTSDNRT VLVNKNNIIATYLHGIFDNKDFTNNLLNEIRRRKGLEEVNSNISYEEYKIQEFDKLEKLV RENIDIEEIYKIIGLK >gi|292606589|gb|ADGG01000021.1| GENE 325 294706 - 295632 950 308 aa, chain + ## HITS:1 COG:no KEGG:FN0976 NR:ns ## KEGG: FN0976 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 305 1 304 305 356 64.0 6e-97 MSISFYIKNKRKIIAYEPVLTVKEALALSDKELNVFAISDIDINKLLLSPLSDYECLLIG VKNKSARGFELSYDKKNKDYVVRIFTPSSREDWLLALDYIKTLAKKFNSEIENNRGEIYT IKELDKFDYESDILYGISSISAKINDREGAQYIILGINRLVVFNKKMLDKIYSSGNTIDA FSTIVREIQYLDASSAPQNFFKNNDNGKIMGNYTLVEGVRTILPYIPNVEFENSNIVKNE DISVWNITLLIIELNKNDGKNYYCSVGNLEYDKFIKKIPTDKYKFIDGAYIMLEPLTKEE ILKLLDGE >gi|292606589|gb|ADGG01000021.1| GENE 326 295635 - 296606 1043 323 aa, chain + ## HITS:1 COG:FN0975 KEGG:ns NR:ns ## COG: FN0975 COG1270 # Protein_GI_number: 19704310 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Fusobacterium nucleatum # 1 319 1 319 325 511 87.0 1e-145 MFNYFFIKFGIAYILDLILADPRWLYHPVIIIGKLISFLEKFLYKAKNKIYSGAILNILT LSVTFIVSLFLARTNYVVEIFFLYTTLATKSLANEGNKVYKILKSGDIEKAKKELSYLVS RDTNTLSLDKIIMSVVETIAENTVDGFVSPAFYAFVGNFFHIELFGQGVSLALPFAMTYK AINTLDSMVGYKNEKYIDFGKVSARVDDVANFIPARLTGLIFVPLSTLILGYDFKNSLRI FFRDRNKHSSPNSGQSESAYAGALGIQFGGKISYFGKDYEKPTIGDKLKNFDYEDIKKAV NILYLVSFIATITIIPCSLFYNS >gi|292606589|gb|ADGG01000021.1| GENE 327 296718 - 296996 388 92 aa, chain - ## HITS:1 COG:FN0818 KEGG:ns NR:ns ## COG: FN0818 COG0776 # Protein_GI_number: 19704153 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Fusobacterium nucleatum # 1 91 1 91 91 138 90.0 3e-33 MTKKEFAKLLFEKGVFTTRTEAEKKVDIIFETMEKTLLDGEDISIINWGKLEVVERAPRL GRNPKTGEEVNIGERKSVKFRPGKAFLEKLNK >gi|292606589|gb|ADGG01000021.1| GENE 328 297290 - 298639 1238 449 aa, chain + ## HITS:1 COG:FN1151 KEGG:ns NR:ns ## COG: FN1151 COG0534 # Protein_GI_number: 19704486 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 449 1 448 448 515 67.0 1e-146 MEIKNNYFIENRKLIKNIFQITLPAVFDLLAQTLIMAFDMKMVSSLGPSAISSVGVGTAG MFALIPALIAVATGTTALLSRAYGADNKIEGKKAFTQSFFIAVPLGIFLTIIFLLFSEQI INLVGNAKDMNLKDAILYQNMTVIGFPFLGISIATFYAFRAMGENKIPMIGNTLALVLKL ILNFLLIYLFKWGIFGAALSTTLTRLFSAIFSIYLVFWSKKNWISLKVKDLKFDYFTSKR ILKVGIPAAVEQLGLRIGMLIFEMMVISLGNLSYAAHKIALTAESISFNLGFAFSFAASA LVGQELGKGSSQKALKNGYICTIIAMIVMSTFGLFFFIIPQFLVSLFTKDKDVIELATMA LKIVSICQPFSGASMVLAGALRGAGDTKSVLLITYLGIFLIRIPITYLFLDVLNLGLAGA WIVMTIDLAIRSSLAFYIFRRGKWKYLQV >gi|292606589|gb|ADGG01000021.1| GENE 329 298733 - 300100 473 455 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 2 450 4 444 458 186 29 8e-46 MYDLIVIGWGKAGKTLAAKLAAKGKKIAVVEENPKMYGGTCINVGCLPTKSLVHSAKLIS QVKNYGIDGDYEFKNNFFKEAMKKKDEMTTKLRNKNFSILDTNENVDIYNGKGSFISNNE VRVVTKDGEVVLKADKIVINTGSVSRNLDIEGANNKNVLTSEGILELKELPKKLLIIGAG YIGLEFASYFRNFGSEVSVFQFDDSFLAREDEDEAKIIKEILENKGVKFYFNTSVKKFED LGDSVKATYVKDKEEFIEEFDKVLVAVGRKANTENLGLENTSVELGKFGEVIVDDYLKTN APNIWAAGDVKGGAQFTYVSLDDFRIIFPQILEGAKGRKLSDRVLIPTSTFIDPPYSRVG INEKEAQRLGIAYTKKFALTNTIPKAHVINETDGFTKILINENNEIIGASICHYESHEMI NLLSLAINQKIKANVLKDFIYTHPIFTESLNDILG >gi|292606589|gb|ADGG01000021.1| GENE 330 300166 - 301059 885 297 aa, chain + ## HITS:1 COG:no KEGG:FN0821 NR:ns ## KEGG: FN0821 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 297 1 288 288 244 52.0 4e-63 MKKIFLSLSLLLFVSCVNIDKLNVFNKNDSKVAEKTTANTNKNVASSKKDKQKKSAPIVP TKGTKSKNLLRDAEVMPEDNYANRVKKYKAYNSLIAFNPNYKSNVEAKMGELKSKIESTY TIKVSVTDLILQNLTKKEEFNNIGSKVFNYSNTNPDLNLLVDISSVNYIKPTVNVKTAPK EYSEEYVNSEGNKVLNVVKYYENETTKTTALSFVVTYKLVSNLTGEVLFHYKKTVDKSYK ESWKNYYVSSFRMNKRKQIPSDEPEKSVPTKEQIYQIAYEEMYDMIQKEINNLPSIK >gi|292606589|gb|ADGG01000021.1| GENE 331 301107 - 302201 1311 364 aa, chain - ## HITS:1 COG:FN0617 KEGG:ns NR:ns ## COG: FN0617 COG0592 # Protein_GI_number: 19703952 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Fusobacterium nucleatum # 1 364 1 364 364 509 78.0 1e-144 MKFSINKENVIGIISEYTNILKDNPVKPSLAGLFIEVKNNQVVFKGANTEVELIRYANCN IEVEGQVLIKPSLLLEYIKLVESENINFEKKDGYLIVNNAEFSILDETTYPEIKEVVSTT IAKENSQKFSNLLEKVKFLTNSSSNLDALFNSIKITFKDNFVELASTDSYRLIYLKKPLE NVVSKDILVPADSMAVIYKILKDLNEDVTLATSEDKLIVTWKDAYFSCKLLSLSFPDFIP LITNPNHDKKFEFNRDELNSSLKKVISVTKNSNDSKNVATFNFKGNQLLISGMSSNAKIN QKVNMIKTGEDLKLGINCKYIKEFVDNTDKNIIIEATNSSSMLKIVEEANEDYIYLVMPV NIRV >gi|292606589|gb|ADGG01000021.1| GENE 332 302221 - 303249 1518 342 aa, chain - ## HITS:1 COG:FN0618 KEGG:ns NR:ns ## COG: FN0618 COG0687 # Protein_GI_number: 19703953 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Fusobacterium nucleatum # 1 342 1 342 342 607 92.0 1e-173 MKKIFLLFLATIMLVSCGDSKDENTLYVYSWADYIPQFVYEDFEAETGIKVVEDIYSSNE EMYTKIKAGGEGYDIIMPSSDYYEIMMKEDMLAKLDKSQLENTKYIDDAYMAKLREFDPE NDYGVPYMRGITCIAVNTKFVKDYPRDYTIYDREDLAGRMTLLDDMREVFVPALALNGYK QDADSEEAMEKAKAKVLAWKKNIAKFDAESYGKGFANGDFWVVQGYPDNIYRELSEEDRK NVDFIIPPGDQGYSSIDSFVILKDSKNIENAMKFINYIHRPDVYAKISDFIEIPSINLEA DKLVTKKPLYDVSKTKDAQLLIDIGDKLNIQNKYWQEILIAN >gi|292606589|gb|ADGG01000021.1| GENE 333 303317 - 304162 916 281 aa, chain - ## HITS:1 COG:FN0619 KEGG:ns NR:ns ## COG: FN0619 COG0668 # Protein_GI_number: 19703954 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Fusobacterium nucleatum # 9 280 1 272 281 418 77.0 1e-117 MNKTFFEKMLEKLLVDLETYLPLLAGKLVAFLLVCFIWPKITKFILRLLDKSRTLKNDDP LLLSFLKSLVKAIMYVIQAFLLIGIIGIKATSLVTILGTAGVAVGLALQGSLANLASGIL ILFFKQVSKGDFVSSLDKSIEGTVESIHILYTVIKQANGPLIFVPNNQIANASIINYSRN PYRRLDLVYSSSYDVPVDKVISVLHEVVNDEKRIIKDNPDMPITITLNKHNASSLDYIFR AWVKKEDYLDTMFACNANVKKYFDKNNIEIPYNKLDLYMKK >gi|292606589|gb|ADGG01000021.1| GENE 334 304369 - 305355 935 328 aa, chain + ## HITS:1 COG:no KEGG:FN0917 NR:ns ## KEGG: FN0917 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: Purine metabolism [PATH:fnu00230]; Pyrimidine metabolism [PATH:fnu00240]; Metabolic pathways [PATH:fnu01100]; DNA replication [PATH:fnu03030]; Mismatch repair [PATH:fnu03430]; Homologous recombination [PATH:fnu03440] # 1 322 1 322 322 424 78.0 1e-117 MIEFETEKKTEEILEKYPNISAKYYDCALKEEDEFLSALQVNSIFKTVDFLVLKRAETLK SSGVQKLFKTLKNYDLNEKNIIIIYNVPIQYGKVASEYEITKASIKAIEEIATFLDCTLI KENNIILNYVKDNLNITEKDAKDLIELLGSDYYHIKNETNKIAAFLDGQPYSFEKIKNLI SIDKEYNMKDLVENFFKTKNFTDIFNFLETNKDSYLGIVYMLADELIVFLKLTSLINSGK ISQHMNYNVFKELYNDFSDLFIGRNFKAQHPYTIFLKLNSLTYFSEEFLENKLKELLYIE YGLKTGEKEINIELDLFFKKFWKDVPSY >gi|292606589|gb|ADGG01000021.1| GENE 335 305314 - 305919 385 201 aa, chain - ## HITS:1 COG:FN0945 KEGG:ns NR:ns ## COG: FN0945 COG0671 # Protein_GI_number: 19704280 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Fusobacterium nucleatum # 3 197 2 197 199 193 68.0 2e-49 MKDNLQRLKIKYIIFITIFFTVLYKGAEFYTRTLDYVPSYFMAWEKKIPFLTIFMLPYMT SAPFFFGTFLTIKDEKSLNFYVKQAIFLTVVSIAIFFIIPMKFYFPKPEIANPIFNFFFY VLGQLDSSFNQCPSLHVSFAFLSIAIYCKEMKTKLKYLISIWGFLIAISVHFVYQHHFID FVGGFIMFLITWYIFPKFLKK >gi|292606589|gb|ADGG01000021.1| GENE 336 306008 - 306631 619 207 aa, chain + ## HITS:1 COG:FN0946 KEGG:ns NR:ns ## COG: FN0946 COG1451 # Protein_GI_number: 19704281 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Fusobacterium nucleatum # 1 207 14 227 229 246 71.0 3e-65 MEYTITKKKIKNFILRIYPDLTIAVSAPLSATSKDIENFVLSKKEWIEKTLEKLEKLKDD SIKILGKKVEKKVIQSDLERISLTDRNIFIYTKNTEEIEVEKKFLEWKYNKLKEIIDEAI EKYTKLLNTEINYYKIKKLSSAWGIYHRRENYISFNIDLIEKEIESIDYVVLHEICHIFY MDHQKKFWALVEKYMPDYKIRRKKLKS >gi|292606589|gb|ADGG01000021.1| GENE 337 306761 - 307573 1330 270 aa, chain + ## HITS:1 COG:FN0947 KEGG:ns NR:ns ## COG: FN0947 COG5266 # Protein_GI_number: 19704282 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 270 1 270 270 486 89.0 1e-137 MLSKKLLIGALVATMSMSAFAHFQMIHTADSDISGKSSVPFELIFTHPADGTEAHSMDMG KDEKGTIQPVVEFFSVHNGEKKDLKANLKASKFGPASKQVTSYKFNLDKNSGLKGGGDWG LVVVPAPYYESAEDVYIQQIAKVLVNKDELATDWNKRLANGYPEIIPLSNPITWKGEIFR GQVVDKDGKAVANAEIEIEYLNANIKNSKFVGELQKDKTATVIYADENGYFSFVPIHKGY WGFAALGAGGELKHNGKELSQDAILWIEAK >gi|292606589|gb|ADGG01000021.1| GENE 338 307617 - 308600 1183 327 aa, chain - ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 1 327 1 327 327 628 94.0 1e-180 MAYTSSLDILETEIAIKKVKDFFESHLSKELDLLRVSAPLFVIPESGLNDNLNGTERPVS FDTKNGERVEIVHSLAKWKRMALYRYNIENHKGIYTDMNAIRRDEDTDFIHSYYVDQWDW EKIISKEDRNEEYLKEVVRKIYSVFKATEDYITKEYPKLTKKLPEEITFITSQELEDKYP TLTPKNREHAAAKEYGAIFLMKIGGKLTSGERHDGRAPDYDDWDLNGDIIFNYPLLGIGL ELSSMGIRVDENSLEEQLKISHCEDRRSMPYHQMILNKVLPYTIGGGIGQSRICMFFLDK LHIGEVQASIWSQEVHEICRQMNIKLL >gi|292606589|gb|ADGG01000021.1| GENE 339 308669 - 309958 1731 429 aa, chain - ## HITS:1 COG:FN0775 KEGG:ns NR:ns ## COG: FN0775 COG1362 # Protein_GI_number: 19704110 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Fusobacterium nucleatum # 1 428 1 428 429 697 83.0 0 MNKQKLAKDLIKFIDESPSNYFACINAKEILNKNGFTELSEAEEWKLKKGEKYYVTINDS GIIAFTIGTDKIYKSGYRIAASHTDSPGFLIKPNPEMNKKDYDILNTEVYGGPILSTWFD RPLSFSGRVFVEGDSAFKPKKYFINYDKDIFIIPSLCIHQNRGVNDGMAINAQKDTLPLV SISKDKNKFSLTALLAKELKVKENEILSYDLSLHSREKGCILGANDEFVSVGRLDNLAAF HASLNSLIDNKDKKNTCIVVGYDNEEIGSHTIQGADSPTLANILGRISNAMDLTLEEHEQ ALAKSFVISNDAAHSIHPNYLEKADPTNEPKINCGPVIKMAANKSYITDGYSRAVIEKIA KDAKIPLQIFVNRSDVRGGSTIGPIQQSQIRIQGIDIGSPLLSMHSVRELGGVEDHYNLY KLISELFKN >gi|292606589|gb|ADGG01000021.1| GENE 340 310032 - 313163 3385 1043 aa, chain - ## HITS:1 COG:FN1149 KEGG:ns NR:ns ## COG: FN1149 COG1074 # Protein_GI_number: 19704484 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Fusobacterium nucleatum # 1 1042 1 1056 1056 1214 72.0 0 MNKIKNLVVSASAGTGKTYRLSLEYITALSKKANAEAIDYKNILVMTFTRKATSEIKEGI LKKLSEFLEIYDICKNSKLSVRDTISNNKNLDEKKKNNYLSLIESIEKNEKDLVVDCEFL ENLSNVYKDIIRNKEKLKIYTIDAFLNIIFKNIVLNLMKIKSYSLIDENENSVYYKKVLE NIFTNKKLFYDFKKFFSENSEKNIDNYISIIQKLISSRWKYILSLNDSKEYIKKEKLSID EKPVEILRELFSYLENDAKKDLYDVLKKDCTDYIGKTIEAQRKLLFKNFNFFFQKGTAGL IYNGNKLKKESDREHKEYIISRQEVLKENLAKEVYNEVLIPYEEKIFELSLEIFRLYDMF KVRDKNFTFNDIAIYTYMAIFNKENGLIDENGLTDVFFESLDMNIETIFIDEFQDTSILQ WKILYEFTKKAKIVVCVGDDKQSIYGWRDGEKRLFENLKTILNAQKDPLKKSYRSDINIV SYCNELFSTISKKDNWPFNPSEINSKNQGYIKAICMSDQGEEDNIYSVLLEELQHFAPYD NVAIIARTNNELNEIAQLLESEGIPYILNNDKDISEYPGIFECFELLKYLIYGYELALFN FISSPLSNIGTEDIEVLLKNKNDVLSYINFSQDNEFINSLENKKIINFLNKIIDIKKNFK SFKVQNLIYEIIKKFQFLDYFVEFNEVKNIYDFYLLSNSYHSVIELLNDYNENKLILSDI KSNKKGVELVTIHKSKGLEFKTTFVIKNDKKSKSSDIDFLFEMNETYDKTTFSLFSKKGY KNILEACFEDRVAEYNKKIQEEEINNFYVALTRPKNNLIVLYNDRLFEEKPLENSIFKDF FSCEIGEVHKSEVIVEEETSEETQYNSTSYFIDSSNENENLNDFDINNSKFLLETEEKRM TGILVHYFFENLKYGTEEEVTFAKNLCYKRYLSYFGKKKLDEIFSKENIEMFLNKDKEIF SKKWDYIYNEYVLYDSIEKQEYRIDRLMIKDNEDGTGEIYIVDYKTGGKDENQLKTYVSV LKKTFKELKNYEIKTNFLEFDIF >gi|292606589|gb|ADGG01000021.1| GENE 341 313156 - 315852 2127 898 aa, chain - ## HITS:1 COG:no KEGG:FN1150 NR:ns ## KEGG: FN1150 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 891 1 898 903 955 66.0 0 MKQIKYNYLNYNQLTNNELLSTIEKIPEDTLIIVENELAKKQYSSYINKGQLRIKTNIIS FEDFLDKIFISNRKILRDIKRFFLFYSYLKDETKKKFNITSYFDCIEIADDFFEFFSYIK NKEDLDNLNLSKWQEEKFELFFEIKNEMDKFLNENAYLPSDWLYSITNLKLDFLKKYKKL VFFDIVDFPYNFSKILETLKNYYDIEITLQMEDKDFNKDKLKLNKVSLIDKKLDIELVKY SNELELYTMILSKQYDNYYTTDANKEDKYSIFTKSNKFYLNDTKFYKIIEAYLNLLNGID YKNRNLIDIFLVKENIFNSAFMEFYGLDVEDYKCFEKIISRDYRYISLTLLKEEYYSHFL NDDENLKTKLNLIFETLNSIEKINDISDLNSFLCANFFNSKTDINFFIENKFDSLYDKIY EVLGLLNSNENIEFFNNFNSFFKTNIGKNIFTLFFNYLNKIDIYSVENNKNKDKELKNLN LIKYSAKNIENSALLYADSQSLPKTKVNNTMFTEQQKIKLALKTNEEEILIQKYRFFQNI LNLDKITVYSLVNQDINIDFSPFIYELINKYSAKELDISDLKGFFKACYLQNKTEVFKKE KVFFRAFSKKNTDFINNTLTIGAYDYILLKKNETFFFLDKICGIESISETSPVNGISPKV LGNILHKTLEDIFKTNWKNILNDSNKLLLSKEEIKKYLEKYIWQENLKIENFMELYLNEV LFPRLIDNIEKFLEVLHEELKDTKIKRIEAEKESTTKNVAYLEHKGIQIVLNGRADLLIE TEKARYIIDFKTGSYDKNQLEFYALMFYGSDTSLPVYSATYNFWEEEKAFDFNKHLVNNL EEKDSNFKTFLRDFLDKDHYTLPSKSSLKENGFDFNEYYRYRNIISLEKISDIGGSDE >gi|292606589|gb|ADGG01000021.1| GENE 342 315849 - 316370 586 173 aa, chain - ## HITS:1 COG:FN0874 KEGG:ns NR:ns ## COG: FN0874 COG0494 # Protein_GI_number: 19704209 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 170 1 170 171 265 82.0 4e-71 MKFKHISKNQVFKNDVITVFEETLALPNDNVVTWTFTGKKEVVAIIAEVENEIFFVKQYR PAIKKELLEIPAGLVEKDEDILDAAKREFEEEIGYRANKWEKICTYYNSAGINAGQYHLF YATDLEKTHQSLDENEFLEIIKIPFNDIDIFSLEDSKTMLALSYLKIKKEGAL >gi|292606589|gb|ADGG01000021.1| GENE 343 316469 - 317137 506 222 aa, chain - ## HITS:1 COG:FN0851 KEGG:ns NR:ns ## COG: FN0851 COG0500 # Protein_GI_number: 19704186 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 222 1 222 222 292 71.0 4e-79 MNFDKHYSTYEKNSLAQKQVAEHLLAYMEDDDILKREINSIFEIGCGTGIFTREYRKFFP SSSLILNDIFDVKSFIKDIDYNIFIKENIEEIDIPKSDLVLSSSVFQWIDGLENLVRNIA KNTDILCFSTYVFGNLLEIKKHFDISLEYLKTEEIEKIIAKYFQKFKIYKETIKIDFESP LSVLRHLKYTGVTGFQRASFSRIKSFKATSLTYEVAYFICQK >gi|292606589|gb|ADGG01000021.1| GENE 344 317141 - 317743 630 200 aa, chain - ## HITS:1 COG:no KEGG:FN0850 NR:ns ## KEGG: FN0850 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 196 1 196 196 260 72.0 2e-68 MSKIYFFNGWAMDENLLSPLKNSTEYEIKVINFPYSIDKTSISKGDIFLAYSFGVYYLNK FLSENQDLIYEKAIGINGLPETIGKFGINEKMFNMTLETLNDENLEKFLLNMDIDESFGR AKKTLEEARYELQYFKDNYKSIPNYIHFYYIGKNDRIIPANKVEKYCQVNNIAYELIACG HYPFSYFRDFKDIINISEEK >gi|292606589|gb|ADGG01000021.1| GENE 345 317744 - 318877 1127 377 aa, chain - ## HITS:1 COG:FN0849 KEGG:ns NR:ns ## COG: FN0849 COG0156 # Protein_GI_number: 19704184 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Fusobacterium nucleatum # 1 377 5 381 381 544 79.0 1e-155 MLKENIIKELEGFKSENRFRTIKTNDKSLYNFSSNDYLGLANDKTLSQRFHENYTFDNYK LSSSSSRLIDGSYQTVMRLEKKVEEIYGKSCLVFNSGFDANSSVIETFFDKNSLIITDRL NHASIYDGCLNSEAKLLRYNHLDVDSLEKLLKKYSKTYEDILVVTESIYSMDGDCADLKK ICDLKDEYKFTLMIDEAHSYVVHSYGIAYNEKLIDKIDFLIIPLGKAGASVGAYVICDKI YKNYLINKSRKFIYSTALPPINNLWNLFILENLTLFHDKIEKLKDLVNFSLTTLKKANIK TSSTSHIISIIIGDNLKTINLSETLKEKGYLIYPIKEPTVPKDTARLRISLTANMKKEEL DTFFKILKTEMKKLGVI >gi|292606589|gb|ADGG01000021.1| GENE 346 318987 - 319592 642 201 aa, chain - ## HITS:1 COG:no KEGG:FN0848 NR:ns ## KEGG: FN0848 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 201 1 201 204 278 84.0 1e-73 MEKEKIINEILEKEWKYFSNLNNIGGRADCQDNREDFIIMRKSQWETFNEETLLSYLEDL NSKNNPLFQKYAQMMKYNSPEEYEKIKDILEKPSEEKTDLVNKIMFIYMEWEKEFFERYP IFSSMGRPLYSSEDDNIETSIETYLRGELLSYSEKTLSLYLDYIIDNKEKNINLAIKNMD NLAKMQGFNNSEDVESYYKIL >gi|292606589|gb|ADGG01000021.1| GENE 347 319670 - 321487 1914 605 aa, chain - ## HITS:1 COG:FN0847 KEGG:ns NR:ns ## COG: FN0847 COG0457 # Protein_GI_number: 19704182 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 605 1 599 599 957 84.0 0 MKLDELNKKREQYQTEGNILKEIEILREILIETEKLYGLESDEYIKALNELGGTLKYVGY YDEAEANLLKSLEIIKKKYGDNNLPYATSLLNLTEVYRFAQKFNLLEENYKKIVKIYQDN SADNTFSYAGLCNNFGLYYQNVGDMKAAYDLHLKSLDVLKNYDSEKYLLEYAVTLSNLFN PCYQLRMKEKAVEYLYKAIEIFEKNVGKEHPLYSASLNNMAIYYYNERQLEKAIEFFEKA AEISKKTMGLDSDNYKNILSNIEFIKDELGKNSDDKSSQKTKVNKNNKVIENSTKGELEN IKGLELSKRYFYDIVLPEFEKNLSDILPLCAFGLVGEGSECYGYDDKISQDHDFGPSVCI WLKKDDYLKYGDRIKEALKTLPKTYLGFQELKESEWGSDRRGLLDIENFYFKFIGSSNVP KTIAEWQKIPETALATVTNGEVFLDNLGEFTKIRKDLLNYYPEPIRQNKIATRLMNISQH GQYNYTRCLKRNDLVAANQCLYLFVDEVIHLVFLLNRRYKIFYKWSNRALLDLKILGKEI YKLLEDMVFAQNKIPYVRKICKVLAEELRNQKLTNCDSEFLGDLGVDIQKNIDDEFFKNY SPWLD >gi|292606589|gb|ADGG01000021.1| GENE 348 321505 - 324849 2704 1114 aa, chain - ## HITS:1 COG:YOL016c KEGG:ns NR:ns ## COG: YOL016c COG0515 # Protein_GI_number: 6324557 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Saccharomyces cerevisiae # 104 292 66 245 447 80 33.0 2e-14 MNNNKTPTISESKDNVNDTDISQNENLKRAVTLVDDTGDDSLKKLSQDKDISRQSTTLLD NSSTDESIFDNSLYISDNKLLELKIKKEDRLDIESGESILFKNKVSNNEKKEVEVLIKVF KNIDIESDAKKLENRKKILELVYEKRKEVEENNLARVISYGKVIANSKEYFAEVYRYYSG GDLLDKTPLKYEEIKTNIIPSLLKALRYLHSHNIVHRDIKPENIYMDEKRKIYLGDFGIA RYIGDELIDYDKEKYGTPGYTAPELLLLNTGRVLKESDYYSLGQTLYTLYTGELMYKSII NNKKLFHNDMFRDKYYGFSKFKEHKLLEALIKGLLKYSVSERFKDEDIKKFLEGNESLKR KVNMEDNNSFDSSLNIYGEKLWSKSEVYDFLIKNKDKIDKILNEEVLSEFFERNKMPTDR NTIQEIEENYLKGRNSFEKKYQIFKLYRFFKEENIFIWDNEEIKTYKDITTIPAQDLKKL LEKGVIKEFFTNLKCEPDFIKKLDEIKKYPEDRIACILNIYFDTNNNGKKADEYTYQGKN LNSLITEYIETKDKNNLLIPLLSLLYIYGYPNIDENNLLPILEENAKENSVKIKIREEYL KSKIILTNENISISDRYKSLEDMIQDIKNHKYEATGKESKEILANICSCEIFPNRMNINE IRKSINNFEYEYQRFQAKFEDNPYAVMNKTYTEDSIITRYCNKYLRTEKLSEKLDEYRKE FKQEVSQKKSSFGELKPDNANNERIPLLFLVSVISFVLAYAFSRTDLYIKYITVDNSVIK LLLPQFRYLFYSIAIYFLVKAMIFLILTSTLNHKAIEKKYNNLYDENFGKNFDNTLDYIY NSITSKEDVKFEQDYSETNEKLDKLKEKYDDVIVRYEKLRKIQLFLPVISMMLILFFVFK NLNIFNNEYFLFKLYGYFLSVAIIYVLATERKLKTLYYSKNIFLALSIISIVGLYLYQYS TFYTLDFNLGLLENLKLHKVGLIGVSLLVLLNLNLQGIIKTNKSYFFYILLIPGIIVPLT FLTLNLNLKWYYFYFLLALPGAIGIVSYRDHKRIIGYLMYKIPFALLGYSLITMTRTPMF KLTGFFNAFVMLFMGDIFVGIVLVIVLGIIVTIL >gi|292606589|gb|ADGG01000021.1| GENE 349 324842 - 325603 853 253 aa, chain - ## HITS:1 COG:SPy1626 KEGG:ns NR:ns ## COG: SPy1626 COG0631 # Protein_GI_number: 15675502 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Streptococcus pyogenes M1 GAS # 31 250 10 243 246 92 30.0 1e-18 MFKYCSINDIGVSYKVNDDKIMINDVIIEEGTYRGETKDYISAILCDGVSGEFEGNRAAL ETLQNLKSIVKENLIKEEVIEKIKETNTLIRKIQNDENKKNALKTTLVGIYSNNDIFIYY NLGDSRAYRYRNTYFQRLTKDDSKVQNMIDAGLLTEEEAITYPERNIISNCIGYSDECKI NIHSSIGLIPNDIIFLCSDGVTDVIDDDTLKSIFDKKNSIEETLKEIHSLSIKNGSKDNI SLILIKKENEVNE >gi|292606589|gb|ADGG01000021.1| GENE 350 325609 - 327441 524 610 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 236 610 450 813 815 206 32 9e-52 MTDKKPKWQKEIESFKGIKSTFIIEGNINDIYPYYDEKDQLNYYNLDSLLIKLFKIEELI VEAVTKLEYNFVFCNPVLGFYNKKSSVPEILKDFDEANNIFKNDGRESYKVDDIEKLSVI IKEALTTKKEKPITIVMNFAARYISSPTSLDSCENNMFINLFEASMNAKAIKGYSNTLIL VVEKFNDLPSWFYYNNPNVRTITIPNPDKNIRLDFIEMNYKEELESNLKIKGKFIDNTEG LKNIELKELKNLYERHKKKDENYSLLDALTMYKYGIKENMWESIDDEAVNNLENSLKDRV KGQDKAIKKVSSVIKRAVTGMSGLQHSSTGNKPKGILFFAGPTGTGKTELTKALAEVLFG DENNCIRFDMSEYSESHSDQKLFGAPPGYVGYEAGGQLTNAIKERPFSILLFDEIEKAHP SIMDKFLQILEDGRMTDGQGNTVYFSEALIIFTSNLGITKKIIDSSGNERREMLVSIDES YEDMENKVINGIKAHFKPEVVNRIGNNIVVFDFIRDEVSQLIVKSQIKKINENIEKIKKI KILISPEILEYYYKLAKEKNILEMGGRGIGNMIEDKYINELSDYIFNSRNENGNIIAYIE NEKINFKREE >gi|292606589|gb|ADGG01000021.1| GENE 351 327453 - 328007 515 184 aa, chain - ## HITS:1 COG:MTH287 KEGG:ns NR:ns ## COG: MTH287 COG0602 # Protein_GI_number: 15678315 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Methanothermobacter thermautotrophicus # 1 166 39 204 237 94 33.0 1e-19 MYIDRILYPIYTLGPGSRVVIWTKGCSKRCKNCSNPELWNINKSKNRDVKSLFQIILNIS KENHIDGITFTGGDPLEQFNELIEFVGLLKNITNDILVYTGDYFKDLGKDIQKEIKKNIP VLIDGPYIDELNFKDVKLRGSKNQNIIYFNKKLRHTYKQYMSKDRMIQNVIMRRKLISVG IHNK >gi|292606589|gb|ADGG01000021.1| GENE 352 328007 - 328597 872 196 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0994 NR:ns ## KEGG: Lebu_0994 # Name: not_defined # Def: FHA domain containing protein # Organism: L.buccalis # Pathway: not_defined # 4 196 2 234 234 145 47.0 6e-34 MTRECEICGSEIEDTDKECPICSPKKDEKVIKNEKKKMIARCVESGYETEIDEDAEKFYC EECGFEHRINGDDFIKIPIGEEIKEETVVEKEQVEEALYLIFKKNEKEVIKVSKTGGIIG RDGDYGSDLFTKYSMLTVSRQHIKIEHNKIGDWIVWHLGTNDTEINGEKMLPNSPKILKN NDEITLAKISFRVEIK >gi|292606589|gb|ADGG01000021.1| GENE 353 328598 - 330037 1555 479 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0993 NR:ns ## KEGG: Lebu_0993 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 479 1 477 477 328 52.0 3e-88 MSGPKVSRVDLDMQRRAELQRENERKSKIIFEIKNKVRILNSFNVKTIDSIISDKLARKL ELLKEKFYKSLNNIVNKANVNESFNELEIINRDSEKILGEFKEDYDSIFKKIETAINKIN KFQIQEDRNNIISLIDKISLEKKEGAKSISIDIKKIVDKILKIDSQNTENIKKSEFKEIK IEKVKTDEVFNFSIFSEKEDKKNENALSTKDIEIITKEIFEKLSDFLENNECTVDYRQEV LDMKIQFLELEKKDIDLDLKKELLLERREIIESSLKIIKSNVKEIESLYEDYLKQVYSLN YSDIKSIRDFASKEEIRNEIEIFKKKVENISVKNYIKEQLDDVMMKHGYNMVDSEYIERV KTDNRLLYKVNDSTGIDVFMSDTQEKMLTLKIVGIGFDEEMSEKESDKLYEEQCNFCSMF PELVEELRVRGVIFKEVRYNEPDKKHNTKIKVKINSENRVNKRKVKENINKIKYKEIER >gi|292606589|gb|ADGG01000021.1| GENE 354 330171 - 330854 886 227 aa, chain - ## HITS:1 COG:FN1476 KEGG:ns NR:ns ## COG: FN1476 COG3010 # Protein_GI_number: 19704808 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Fusobacterium nucleatum # 1 224 1 224 224 331 87.0 5e-91 MNKTLENIKGKLIVSCQALEDEPLHSSFIMGRMAYAAHVGGAGGIRANTVEDIKEIKKNV SLPIIGIIKKVYDNCNVYITPTIKEVEALVNEGVQIIAIDATKRERPDKKDLKDFINEVR KKYPNQLIMADISSVDEALYAEEIGFNIVGTTLVGYTEYTKNFKALEELEKVIKTVKIPV IAEGNIDTPLKAKNALELGAFAVVVGGAITRPQQITKKFVDEMEKIK >gi|292606589|gb|ADGG01000021.1| GENE 355 330869 - 331741 1210 290 aa, chain - ## HITS:1 COG:FN1475 KEGG:ns NR:ns ## COG: FN1475 COG0329 # Protein_GI_number: 19704807 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Fusobacterium nucleatum # 1 290 1 290 290 533 94.0 1e-151 MKGIYSALMVPYNEDGSINEKGLREIVRYNIDKMKVDGLYVGGSTGENFMISTEEKKRVF EIAIDEAKDAVHLIAQVGSINLHEAVELGKYVTKLGYKCLSAVTPFYYKFDFSEIKDYYE TIVRETGNYMVIYSIPFLTGVNMSLSQFGELFENEKIIGIKFTAGDFYLLERVRKAFPDK LIFAGFDEMLLPATVLGVDGAIGSTYNVNGIRAKQIFELAKNSKIAEALEIQHTTNDLIE GILSNGLYQTIKEILKLEGVDAGYCRKPMKRISKEQVEFAKELHERFFKN >gi|292606589|gb|ADGG01000021.1| GENE 356 331762 - 332637 376 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 286 5 319 319 149 32 1e-34 MNILAIDIGGTMIKYGLVSSKGEILSTDKIKTEAEKGLDNILEKIDTILKKCKENDLVGI AVSGTGQINGMIGEVIGGAPIIPNWIGCNLVEILEKRYNLPAILENDVNCMALGEKWIGS GKDLNNFICLTIGTGIGGGIILNNELFRGENFVAGEFGHILIKKGEFQDFASTTALIRLT REKTGKILNGEEIFNLEKQGLIEYKNIIAEWIENLTDGLSSLVYCFNPKDIILGGGVIEQ GDYLIKKIEDSLSKKIGPRFKENLNIKQAKLGNNAGMIGAAYLLLEKINQK >gi|292606589|gb|ADGG01000021.1| GENE 357 332641 - 334494 694 617 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 191 613 4 428 431 271 33 2e-71 MKIFNKLEEWIGGSLFIGLFLILVIQIFARQVFDSPLIWSEELSRLMFVYVGLLGVSMGI RSQQHIMIDFLYAKFPKSMQKVVFTIIQILILGCLIFFLYFGYDLFIKKEELEIVSLGIS MKWMYLALPLITLLMLVRFYQAYSENYTEGKVCIKPIFMLALMIILVLIAFIKPELFKVL KLSEYFDLGEMTVYYVLLAWLIMIFFGVPVGWSLLIACILYFALTRWKVVYFASDKLVYS LDSFSLLSVPFFILTGILMNGAGITERIFNFAKAMLGHYTGGMGHVNVAASLIFSGMSGS AIADAGGLGQLEIKAMRDEGYDDDICGGLTAASCIIGPLVPPSISMIIYGVIANQSIAKL FLSGFVPGFLTTIALMIMNYFVCKKRGYKKAAKATPQERWIAFKRSFWALLTPVLIIGGI FSGIFTPTEAAVIATFYSIILGGFIYKELTVKSFFGHCIEAVAISGVTVLMIMTVTFFGD IIAREQVAMRIAEVFIKYATSPMMVLVMINLLLLFLGMFIDALALQFLVLPMLIPIAEQV GIDLVFFGVMTTLNMMIGILTPPMGMALFVVAQVGKMSVSTVAKGVFPFLLPILITLIII TVFPQLVLFLPNLIMGG >gi|292606589|gb|ADGG01000021.1| GENE 358 334519 - 335502 309 327 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|114773040|ref|ZP_01450335.1| TRAP-type C4-dicarboxylate transport system, periplasmic component [alpha proteobacterium HTCC2255] # 9 326 9 322 329 123 25 8e-27 MRKTSFLKMAILFGVMATSAFAAKYNLKMGMTAGTSQNEYKAAEVFAKELKKRSNGEIEL KLYPNAQLGKDDLAMMQQLEGGALDFTFSETGRFSTFFPEAEVFTLPYMIKDFNHMKKAV NTKFGKDLFKKVHDKKGMTVLAQAYNGTRQTTSNKAIKTLADMKGMKLRVPSAAANLAYA KYTGAAPTPMAFSEVYLALQTNAVDGQENPLSTIKAQKFYEVQKYLAITNHILNDQLYLV SNITMEELPENLQKVVKESAEVAAEYHTKLFMDEEKSLKDFFKGKGVTITEPNLEEFKKA MKPFYNEYTKKNGKVGEDAIKAIDAVR >gi|292606589|gb|ADGG01000021.1| GENE 359 335520 - 336521 1191 333 aa, chain - ## HITS:1 COG:FN1471 KEGG:ns NR:ns ## COG: FN1471 COG1609 # Protein_GI_number: 19704803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 1 333 1 333 333 501 84.0 1e-142 MITQKELAARLGLSRTTIARAINNSPNINPETKEKILKLVKELGYEKNYVGTLLASKKKI IYSFIVESKNSYYTEQIKLGIQGAKKEYKHHNLEIIEIITDINKPVEQVLELKKLLDSNK QIDGIIIIPLDREKILNLINPYLEKIKFISMSVFLSKKIAYVGTDYQKCGRLAAEFLGKS LNVNDKVLVIDNGDDNISSKYYLNGFLDRANEDKMNVIGPIRKNGLEDSLVYLEELFKKE NISSIFINRYAQDILLELPDDILRKQKNITTGIGNRIRKLIIEKKILATVADDVYGTGYK ACQLMVDILYKEMGKKIKNIILEPKVLLIENLK >gi|292606589|gb|ADGG01000021.1| GENE 360 336538 - 337686 1447 382 aa, chain - ## HITS:1 COG:FN1470 KEGG:ns NR:ns ## COG: FN1470 COG3055 # Protein_GI_number: 19704802 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 12 382 2 372 372 641 88.0 0 MGKKILYFLFFMFLSSLGYANQKTMSIEKNRLVWDYAGSLPAQKDFDKNIGTAGLLQGVI GNYVIVGGGANFPEVLEKGGKKVTHKDLYLLKDVNGKLETIDQIQLDYPIGYGASVSVKE ENAIYYLGGSPDAEHMRDVLKVTVKNGKLKTEIYAKLPLGFENGVAQYKDGKIYYGVGKI ENSEGKNVNSNKFYAFDLKTKETKELAAFPGEARQQTVGQILNSKFYVFSGGSNVSYVDG YAYNFKTNTWEKTADVVIDNEKILLLGANSIKIANDKMLVIGGFNYDLWNEANNKLTNLK DDELKNYKTAYFGAEPSWYNWNRKILIFDATKNSWKSIGEIPFDAPCGAALLMMNNNIYS INGEIKPGVRTERMYKAYIISK >gi|292606589|gb|ADGG01000021.1| GENE 361 338075 - 338479 368 134 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1625 NR:ns ## KEGG: Lebu_1625 # Name: not_defined # Def: protein of unknown function DUF1722 # Organism: L.buccalis # Pathway: not_defined # 7 134 7 134 134 154 73.0 1e-36 MEFKKIRKDCEELWARNKYYVLSKSHKTYLEIREYLKEKEVNTLFINEKIERIRGIEESK KDFKNAILHVWGYFKNEATEIEKQVLHNLLEEYMRGKKDQKSVIEYINILLKKYPNEYLQ KSTLLKGEEDETLA Prediction of potential genes in microbial genomes Time: Thu May 19 21:38:33 2011 Seq name: gi|292606588|gb|ADGG01000022.1| Fusobacterium sp. 1_1_41FAA cont1.22, whole genome shotgun sequence Length of sequence - 2643 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 882 921 ## CLK_A0269 putative IS transposase - Prom 1008 - 1067 16.1 2 1 Op 2 . - CDS 1156 - 2196 1083 ## COG2855 Predicted membrane protein - Prom 2242 - 2301 9.7 3 2 Tu 1 . - CDS 2340 - 2642 329 ## COG1943 Transposase and inactivated derivatives Predicted protein(s) >gi|292606588|gb|ADGG01000022.1| GENE 1 3 - 882 921 293 aa, chain - ## HITS:1 COG:no KEGG:CLK_A0269 NR:ns ## KEGG: CLK_A0269 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 1 292 1 297 480 305 58.0 1e-81 MANYVLTLALKTELWQEHILEKRLNIARMIYNACLYEILKRHKKMINSSEYKEISNLEKK EQSKRYKELDKKYSISKFELNKYVKPMTQRFKKNIGSQMGQELAERAFATYEKFKYGKAK KVYFKSYENFYSVREKGNITGLRFFKEDCCISWLGLKIPVIIKNNDKYAQSCFLDKLLYC RLLKRVANGKNKYYVQITFEGTPPKKHKVGGENEIGIDIGTSTIAIVSDNKVELKILAEN IEINEKEKTRLQRKLDRQRRANNPNKYNADGTINIENKEKWKKSKSYVKTKVK >gi|292606588|gb|ADGG01000022.1| GENE 2 1156 - 2196 1083 346 aa, chain - ## HITS:1 COG:FN0533 KEGG:ns NR:ns ## COG: FN0533 COG2855 # Protein_GI_number: 19703868 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 346 1 346 346 486 88.0 1e-137 MNSKLNGIILCLILALPAWKLGKEFPVVGGPVFGIIIGVIIALILKNRAKFDIGISFVSK KVLQYAVILLGFGLNLQTVISVGSSSLPIIISTISISLIVAYILAKFMNIPTKIATLIGV GSSICGGSAIAATAPVIDAHDDEIAQAISVIFLFNVIAALIFPTLGDILNFSNKGFALFA GTAVNDTSSVTAAASAWDSIHNTGTQVLDSATIVKLTRTLAIIPITLFLAVYNSKKNSNT KNFSLKKIFPMFIVYFILASIITTICNYFIEVGIITEDISMIINNVFSFLKYLSKFFIIM AMVAIGLNTNIKKLIFSGAKPLTLGFCCWLAVSLVSIGLQKILDLF >gi|292606588|gb|ADGG01000022.1| GENE 3 2340 - 2642 329 100 aa, chain - ## HITS:1 COG:DR0667 KEGG:ns NR:ns ## COG: DR0667 COG1943 # Protein_GI_number: 15805694 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 5 100 44 139 140 109 46.0 1e-24 KNFKKNYLIEISNENNIKIIEMETDLDHIHILIECSPQHFIPNILKIFKGISARKLFLKH PEIKNKLWNGHLWNPSYFVATVSENTEEQIKRYIQTQKER Prediction of potential genes in microbial genomes Time: Thu May 19 21:39:14 2011 Seq name: gi|292606587|gb|ADGG01000023.1| Fusobacterium sp. 1_1_41FAA cont1.23, whole genome shotgun sequence Length of sequence - 130380 bp Number of predicted genes - 134, with homology - 134 Number of transcription units - 43, operones - 24 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 357 216 ## COG1943 Transposase and inactivated derivatives - Prom 396 - 455 17.3 2 2 Op 1 . - CDS 688 - 1512 1001 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 3 2 Op 2 2/0.000 - CDS 1550 - 2437 1148 ## COG1210 UDP-glucose pyrophosphorylase 4 2 Op 3 2/0.000 - CDS 2449 - 3066 788 ## COG0457 FOG: TPR repeat 5 2 Op 4 1/0.273 - CDS 3089 - 5002 2614 ## COG0143 Methionyl-tRNA synthetase 6 2 Op 5 1/0.273 - CDS 5012 - 5635 635 ## COG2121 Uncharacterized protein conserved in bacteria - Term 5641 - 5690 6.6 7 2 Op 6 . - CDS 5692 - 6039 169 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Prom 6065 - 6124 11.4 + Prom 6062 - 6121 15.0 8 3 Tu 1 . + CDS 6180 - 8171 2452 ## COG0556 Helicase subunit of the DNA excision repair complex + Term 8178 - 8211 2.3 - Term 8166 - 8199 2.3 9 4 Tu 1 . - CDS 8227 - 8721 378 ## gi|294782397|ref|ZP_06747723.1| hypothetical protein HMPREF0400_00366 - Prom 8831 - 8890 10.2 + Prom 8725 - 8784 11.4 10 5 Tu 1 . + CDS 8895 - 9953 1239 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Prom 10237 - 10296 13.1 11 6 Op 1 1/0.273 + CDS 10340 - 14068 4886 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 12 6 Op 2 4/0.000 + CDS 14081 - 14554 746 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 13 6 Op 3 2/0.000 + CDS 14595 - 15308 1146 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 14 6 Op 4 13/0.000 + CDS 15355 - 16704 1850 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 15 6 Op 5 21/0.000 + CDS 16740 - 17771 821 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 16 6 Op 6 10/0.000 + CDS 17759 - 18343 718 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 17 6 Op 7 . + CDS 18384 - 19898 2104 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 18 6 Op 8 . + CDS 19918 - 20991 1053 ## TDE0552 ankyrin repeateat-containing protein 19 6 Op 9 . + CDS 21014 - 22294 1844 ## COG0151 Phosphoribosylamine-glycine ligase 20 7 Op 1 . - CDS 22493 - 22786 244 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 21 7 Op 2 1/0.273 - CDS 22722 - 23036 486 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 22 7 Op 3 . - CDS 23050 - 24096 1041 ## COG3053 Citrate lyase synthetase - Prom 24124 - 24183 15.8 + Prom 24059 - 24118 8.2 23 8 Tu 1 . + CDS 24204 - 25211 1263 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 24 9 Op 1 2/0.000 - CDS 25403 - 26578 1211 ## COG3581 Uncharacterized protein conserved in bacteria 25 9 Op 2 1/0.273 - CDS 26619 - 29546 3421 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 29617 - 29676 10.6 - Term 29676 - 29730 2.2 26 10 Tu 1 . - CDS 29783 - 30208 836 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - Prom 30276 - 30335 10.7 27 11 Op 1 9/0.000 - CDS 30341 - 31909 1173 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 28 11 Op 2 15/0.000 - CDS 31878 - 32621 224 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Term 32639 - 32671 1.6 29 11 Op 3 1/0.273 - CDS 32687 - 33568 1204 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component - Prom 33640 - 33699 8.5 30 12 Tu 1 . - CDS 33708 - 34163 590 ## COG2731 Beta-galactosidase, beta subunit - Prom 34190 - 34249 11.9 + Prom 34144 - 34203 7.9 31 13 Tu 1 . + CDS 34283 - 35440 1724 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 35452 - 35480 -0.1 - Term 35440 - 35468 -0.1 32 14 Op 1 . - CDS 35477 - 36451 990 ## COG2849 Uncharacterized protein conserved in bacteria 33 14 Op 2 . - CDS 36467 - 36838 548 ## FN0638 hypothetical protein 34 14 Op 3 . - CDS 36831 - 37715 849 ## COG1266 Predicted metal-dependent membrane protease 35 14 Op 4 . - CDS 37742 - 38389 668 ## gi|294782421|ref|ZP_06747747.1| conserved hypothetical protein 36 14 Op 5 6/0.000 - CDS 38390 - 39850 1841 ## COG0007 Uroporphyrinogen-III methylase 37 14 Op 6 4/0.000 - CDS 39866 - 40771 1190 ## COG0181 Porphobilinogen deaminase 38 14 Op 7 . - CDS 40787 - 41788 964 ## COG0373 Glutamyl-tRNA reductase - Prom 41874 - 41933 13.2 39 15 Tu 1 . - CDS 41941 - 42480 638 ## COG1335 Amidases related to nicotinamidase - Prom 42513 - 42572 12.7 - Term 42697 - 42747 0.1 40 16 Tu 1 . - CDS 42894 - 43880 1025 ## COG0582 Integrase - Prom 43949 - 44008 7.3 41 17 Op 1 . - CDS 44018 - 45103 1051 ## Lebu_0718 hypothetical protein 42 17 Op 2 . - CDS 45116 - 45412 538 ## FN0836 hypothetical protein 43 17 Op 3 . - CDS 45431 - 46099 951 ## FN0835 hypothetical protein 44 17 Op 4 . - CDS 46112 - 46651 768 ## Sterm_0139 hypothetical protein - Prom 46690 - 46749 7.7 + Prom 46745 - 46804 8.4 45 18 Tu 1 . + CDS 46840 - 47103 267 ## SGO_1740 integral membrane protein + Term 47114 - 47151 4.0 - Term 47096 - 47141 8.3 46 19 Op 1 . - CDS 47147 - 48646 1915 ## FN0834 hypothetical protein 47 19 Op 2 . - CDS 48643 - 50265 1855 ## FN0833 hypothetical protein 48 19 Op 3 . - CDS 50266 - 51213 1226 ## FN0833 hypothetical protein - Prom 51250 - 51309 15.2 49 20 Tu 1 . - CDS 51312 - 51776 598 ## FN0832 hypothetical protein - Prom 51821 - 51880 8.8 + Prom 52224 - 52283 3.6 50 21 Tu 1 . + CDS 52369 - 52647 230 ## gi|294782434|ref|ZP_06747760.1| nitrite/sulfite reductase-like protein + Term 52719 - 52761 1.1 - Term 52707 - 52747 1.5 51 22 Op 1 . - CDS 52920 - 53420 723 ## FN0600 hypothetical protein 52 22 Op 2 1/0.273 - CDS 53494 - 53964 547 ## COG2849 Uncharacterized protein conserved in bacteria 53 22 Op 3 . - CDS 53983 - 55785 2163 ## COG1164 Oligoendopeptidase F - Prom 55889 - 55948 9.7 + Prom 55823 - 55882 13.9 54 23 Op 1 . + CDS 56047 - 56697 847 ## FN0997 hypothetical protein 55 23 Op 2 . + CDS 56710 - 57411 564 ## COG5522 Predicted integral membrane protein + Term 57420 - 57454 5.5 + Prom 57476 - 57535 10.8 56 24 Op 1 41/0.000 + CDS 57563 - 57835 501 ## COG0234 Co-chaperonin GroES (HSP10) 57 24 Op 2 . + CDS 57851 - 59470 1597 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 58 24 Op 3 . + CDS 59483 - 60943 1985 ## COG2195 Di- and tripeptidases + Term 60946 - 60993 5.6 - Term 60936 - 60979 7.1 59 25 Op 1 1/0.273 - CDS 60984 - 61559 678 ## COG2096 Uncharacterized conserved protein 60 25 Op 2 . - CDS 61572 - 62036 673 ## COG0629 Single-stranded DNA-binding protein 61 25 Op 3 17/0.000 - CDS 62111 - 62839 253 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 62 25 Op 4 21/0.000 - CDS 62849 - 63853 1538 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 63 25 Op 5 1/0.273 - CDS 63840 - 64613 644 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - Prom 64640 - 64699 5.3 - Term 64628 - 64663 1.1 64 26 Op 1 . - CDS 64795 - 65715 1204 ## COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain 65 26 Op 2 1/0.273 - CDS 65742 - 66635 1243 ## COG1159 GTPase 66 26 Op 3 1/0.273 - CDS 66635 - 67402 724 ## COG0582 Integrase 67 26 Op 4 17/0.000 - CDS 67392 - 69053 2219 ## COG0497 ATPase involved in DNA repair 68 26 Op 5 1/0.273 - CDS 69047 - 69850 912 ## COG0061 Predicted sugar kinase 69 26 Op 6 1/0.273 - CDS 69863 - 71353 2222 ## COG4942 Membrane-bound metallopeptidase 70 26 Op 7 . - CDS 71325 - 72254 1161 ## COG2177 Cell division protein - Prom 72276 - 72335 12.1 - Term 72313 - 72372 16.4 71 27 Op 1 . - CDS 72405 - 72791 616 ## FN0264 hypothetical protein - Prom 72846 - 72905 12.2 72 27 Op 2 . - CDS 72911 - 73570 1014 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 73771 - 73830 15.4 73 28 Op 1 11/0.000 + CDS 73884 - 76115 3491 ## COG1882 Pyruvate-formate lyase + Term 76127 - 76157 3.6 74 28 Op 2 . + CDS 76177 - 76908 685 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 77073 - 77126 4.2 + Prom 77073 - 77132 10.1 75 29 Tu 1 . + CDS 77162 - 78448 1857 ## COG2873 O-acetylhomoserine sulfhydrylase 76 30 Op 1 . - CDS 78673 - 79851 585 ## COG0658 Predicted membrane metal-binding protein 77 30 Op 2 . - CDS 79864 - 81051 1417 ## FN0749 hypothetical protein 78 30 Op 3 . - CDS 81141 - 81881 689 ## FN0750 hypothetical protein 79 30 Op 4 1/0.273 - CDS 81895 - 82905 1046 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 80 30 Op 5 1/0.273 - CDS 82895 - 83872 1146 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 81 30 Op 6 . - CDS 83915 - 84799 1192 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 82 30 Op 7 21/0.000 - CDS 84829 - 85359 764 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 83 30 Op 8 31/0.000 - CDS 85375 - 86829 440 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 84 30 Op 9 1/0.273 - CDS 86838 - 87128 343 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 85 30 Op 10 12/0.000 - CDS 87138 - 87842 683 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 86 30 Op 11 1/0.273 - CDS 87832 - 88377 672 ## COG1386 Predicted transcriptional regulator containing the HTH domain 87 30 Op 12 1/0.273 - CDS 88393 - 89439 1264 ## COG1077 Actin-like ATPase involved in cell morphogenesis 88 30 Op 13 . - CDS 89455 - 90033 811 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 89 30 Op 14 . - CDS 90035 - 90697 613 ## FN0760 hypothetical protein - Prom 90792 - 90851 11.4 - Term 90933 - 90980 10.2 90 31 Op 1 1/0.273 - CDS 90987 - 91559 620 ## COG1309 Transcriptional regulator 91 31 Op 2 . - CDS 91579 - 93030 2065 ## COG2067 Long-chain fatty acid transport protein - Prom 93076 - 93135 9.9 + Prom 93089 - 93148 12.2 92 32 Tu 1 . + CDS 93187 - 93735 555 ## FN0691 hypothetical protein + Term 93741 - 93783 3.4 - Term 93731 - 93767 4.1 93 33 Op 1 . - CDS 93776 - 94291 790 ## FN0612 hypothetical protein 94 33 Op 2 . - CDS 94306 - 96219 2624 ## COG0441 Threonyl-tRNA synthetase - Prom 96270 - 96329 1.7 95 34 Op 1 . - CDS 96388 - 99891 4189 ## FN0610 hypothetical protein 96 34 Op 2 10/0.000 - CDS 99961 - 100407 620 ## COG0691 tmRNA-binding protein 97 34 Op 3 1/0.273 - CDS 100421 - 102538 1220 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 98 34 Op 4 . - CDS 102553 - 103140 760 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism - Prom 103164 - 103223 11.5 + Prom 103174 - 103233 13.6 99 35 Tu 1 . + CDS 103268 - 104032 933 ## COG4884 Uncharacterized protein conserved in bacteria 100 36 Tu 1 . - CDS 104266 - 105552 1585 ## COG1114 Branched-chain amino acid permeases - Prom 105600 - 105659 8.4 101 37 Tu 1 . - CDS 105661 - 106395 544 ## FN1058 hypothetical protein - Prom 106487 - 106546 6.8 102 38 Tu 1 . - CDS 106624 - 107013 187 ## gi|254303100|ref|ZP_04970458.1| hypothetical protein FNP_0739 - Prom 107034 - 107093 5.0 103 39 Op 1 . - CDS 107131 - 107505 408 ## FN1054 hypothetical protein 104 39 Op 2 . - CDS 107524 - 108249 803 ## FN1058 hypothetical protein 105 39 Op 3 . - CDS 108328 - 108744 576 ## gi|294782486|ref|ZP_06747812.1| hypothetical protein HMPREF0400_00459 106 39 Op 4 . - CDS 108748 - 109215 430 ## FN1053 hypothetical protein 107 39 Op 5 . - CDS 109268 - 109735 405 ## FN1052 hypothetical protein 108 39 Op 6 . - CDS 109761 - 110462 497 ## FN1051 hypothetical protein 109 39 Op 7 . - CDS 110476 - 111192 364 ## FN1051 hypothetical protein 110 39 Op 8 . - CDS 111206 - 111589 613 ## COG0346 Lactoylglutathione lyase and related lyases 111 39 Op 9 . - CDS 111604 - 111930 513 ## FN1049 hypothetical protein 112 39 Op 10 . - CDS 111951 - 113015 830 ## FN1048 hypothetical protein 113 39 Op 11 . - CDS 113040 - 113720 576 ## FN1047 hypothetical protein 114 39 Op 12 . - CDS 113740 - 114492 701 ## FN1047 hypothetical protein 115 39 Op 13 . - CDS 114528 - 114905 152 ## FN1047 hypothetical protein 116 39 Op 14 . - CDS 114880 - 115281 331 ## FN1047 hypothetical protein 117 39 Op 15 . - CDS 115328 - 116014 424 ## FN1046 hypothetical protein 118 39 Op 16 . - CDS 116014 - 117168 1308 ## TDE0809 hypothetical protein - Prom 117237 - 117296 8.9 - Term 117275 - 117312 4.1 119 40 Op 1 . - CDS 117320 - 118405 1336 ## Acfer_1552 hypothetical protein 120 40 Op 2 . - CDS 118433 - 119173 803 ## Lebu_1563 hypothetical protein 121 40 Op 3 . - CDS 119186 - 120031 255 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains 122 40 Op 4 . - CDS 120046 - 121638 1704 ## Athe_2404 hypothetical protein - Prom 121868 - 121927 12.3 123 41 Op 1 . - CDS 121997 - 122524 571 ## gi|294782501|ref|ZP_06747827.1| conserved hypothetical protein 124 41 Op 2 1/0.273 - CDS 122543 - 123721 1092 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 125 41 Op 3 8/0.000 - CDS 123733 - 124056 183 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) 126 41 Op 4 . - CDS 124049 - 124753 822 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 127 41 Op 5 1/0.273 - CDS 124821 - 125642 1111 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 128 41 Op 6 . - CDS 125645 - 126562 993 ## COG1242 Predicted Fe-S oxidoreductase 129 41 Op 7 . - CDS 126602 - 127519 1196 ## FN0976 hypothetical protein - Prom 127541 - 127600 10.4 130 41 Op 8 . - CDS 127602 - 128909 1302 ## COG1757 Na+/H+ antiporter - Prom 129031 - 129090 10.6 + Prom 128979 - 129038 19.1 131 42 Op 1 . + CDS 129087 - 129494 502 ## FN0979 hypothetical protein 132 42 Op 2 . + CDS 129507 - 129764 334 ## FN0980 hypothetical protein + Term 129766 - 129822 13.1 - Term 129760 - 129805 6.9 133 43 Op 1 . - CDS 129813 - 130019 196 ## BAD_1365 hypothetical protein 134 43 Op 2 . - CDS 130070 - 130360 358 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606587|gb|ADGG01000023.1| GENE 1 3 - 357 216 118 aa, chain - ## HITS:1 COG:DR0667 KEGG:ns NR:ns ## COG: DR0667 COG1943 # Protein_GI_number: 15805694 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 1 118 17 134 140 138 47.0 3e-33 MYSIQYHIVWCVKYRRKVLINDIEKTLKELLIEISNENNIKIIEMETDLDHIHILIECSP QHFIPNILKIFKGISARKLFLKHPEIKNKLWNGHLWNPSYFVATVSENTEEQIKRYIQ >gi|292606587|gb|ADGG01000023.1| GENE 2 688 - 1512 1001 274 aa, chain - ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 7 274 7 279 290 161 31.0 1e-39 MSIQDTKVLLINDIAGYGKVALSAMLPILSYKGFNLYNLPTAIVSNTLNYEKFRIEDTTE YIEETLKIWKELNFSFDVISTGFIFTKKQMETISKFCEEQSKKGVFIFNDPIMADNGELY SGISPDTVDYMKNIISVSDVTMPNYTESCLLTKTKYKEGISTEEINAIINKIREIGVKSV VVTSIPSVETKMVAGFDSKINEYFYLPYEEIPTYFPGTGDIFSSVIISETLEGKSLKVAT EKAMKIVKEIVFENKDQEDKKKGIHIEKYLSLFD >gi|292606587|gb|ADGG01000023.1| GENE 3 1550 - 2437 1148 295 aa, chain - ## HITS:1 COG:FN1266 KEGG:ns NR:ns ## COG: FN1266 COG1210 # Protein_GI_number: 19704601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 294 8 301 301 509 88.0 1e-144 MKKVTKAVIPAAGLGTRVLPATKALPKEMLTIVDKPSLQYIVEELVASGITDIVIITGRN KNSIEDHFDFSYELENTLKNEHKSELLDKVSHISTMANIYYVRQNMPLGLGHAILKAKSF IGNDPFVIALGDDIIYNPEKPVTKQMIEKYELYGKSIIGCQEVATEDVSKYGIAKLGNKF DEVTFQMLDFLEKPSIEDAPSRIACLGRYLLSGKVFKFLEETKPGKNGEIQLTDGILAMM KDGEDVLSYNFIGKRYDIGSKAGLLKANIEFGLRNEETKDNIREYLKNLDIDKIY >gi|292606587|gb|ADGG01000023.1| GENE 4 2449 - 3066 788 205 aa, chain - ## HITS:1 COG:FN1267 KEGG:ns NR:ns ## COG: FN1267 COG0457 # Protein_GI_number: 19704602 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 205 1 205 205 328 89.0 4e-90 MGIISQKDKEFFENVEYFSEIIDRINDIQTDNNYSDEEMNNDLDVALWRAFVYINLWNYK GYAKAEKILKKVERKGIKNPTWYYRYAVSIARLRKYKEALKYFILGTEVDSTYPWNWLEL ARLYYKFGELDKVYKCIEKGLELVPNDYEFLTLKDDVKNDRGYFYSINHYINEEVDKTED RGLDFSDEKEWEKFKKETHYGEKCL >gi|292606587|gb|ADGG01000023.1| GENE 5 3089 - 5002 2614 637 aa, chain - ## HITS:1 COG:FN1268_1 KEGG:ns NR:ns ## COG: FN1268_1 COG0143 # Protein_GI_number: 19704603 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 527 1 526 526 994 90.0 0 MKKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMGMDTHFVTGLDEHGQKVEQAA EQNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKG EYEGKYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHPD FILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFE NDDKKFDKFWNDARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMS KSKGNVVDPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLANDLGNLLNR TLGMYKKYFNGIVVASSASEEIDDVIKAMFDETIKDVEKYMYLFEFSRALETIWRFISRL NKYIDETMPWALAKDETKKARLAAVMNILSEGLYKIAFLIAPYMPESAQKISNQLGIEKD ITSLEFDEIKEWNIFKEGHQLGNASPIFPRIEIEKEEVVEEVKKELKIENPIAIDDFNKV QIKVVEILDVDKVKGADKLLKFKVFDGEFERQIISGLAKFYPDYKALVGEKVLAVANLKF AKLKGELSQGMLLTTEDKNGVSLIKIDKSVQAGAIVS >gi|292606587|gb|ADGG01000023.1| GENE 6 5012 - 5635 635 207 aa, chain - ## HITS:1 COG:FN1269 KEGG:ns NR:ns ## COG: FN1269 COG2121 # Protein_GI_number: 19704604 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 206 3 208 209 288 84.0 7e-78 MEENKKYRILGTILYYILRIISFTLRVEIVNNYNIDMQKAHIYGFWHSKLFITPIFFKDV EKKLAMSSPTKDGELISVPLEKMGYVLVRGSSDKKSISSTISLLKYLKKGYSIGTPLDGP KGPKEKAKKGLLYLCQKTSVPLVPVGISYSNKWILKKTWDKFEIPKPFSKVRIVLGEAMI IDENEDLDKYTEIVEKTINDLNKIYEG >gi|292606587|gb|ADGG01000023.1| GENE 7 5692 - 6039 169 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 6 112 3 107 114 69 35 7e-11 MVRKLKGAKPAGNQADIVKQAQVMQQQMLEIQEQLKSKEVSSSVGGGAVSVKVNGQKELV EVKLSDEIVKEAATDKEMLEYLILTAVKNAMAEAEEMAEKEMAKVTGGINIPGLF >gi|292606587|gb|ADGG01000023.1| GENE 8 6180 - 8171 2452 663 aa, chain + ## HITS:1 COG:FN0224 KEGG:ns NR:ns ## COG: FN0224 COG0556 # Protein_GI_number: 19703569 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Fusobacterium nucleatum # 1 653 1 653 663 1130 94.0 0 MENNLFKIHSEYKPMGDQPTAIESIVKNIERGVKDQVLLGVTGSGKTFTIANVIERLQRP ALIIAPNKTLAAQLYSEYKKFFPENAVEYFVSYYDYYQPEAYIKTTDTYIEKDSSVNDEI DKLRNAATAALIHRRDVIIVASVSSIYGLGSPDTYRKMTIPIDKQTGIERKELMKKLIAL RYERNDIAFERGKFRIKGDVIDIYPSYMNNGYRLEYWGDDLEEISEINTLTGQKIKKNLE RIVIYPATQYLTADDDKDRIIEEIKDDLRVEVKSFEDEKKLLEAQRLRQRTEYDLEMITE IGYCKGIENYSRYLSGKRPGETPDTLFEYFPKDFLLFIDESHITVPQVRGMYNGDRARKE ALVENGFRLKAALDNRPLRFEEFREKSNQTVFISATPGDFEVEVSDNNIAEQLIRPTGIV DPEIEIRPTKNQVDDLLDEIRKRVAKKERVLVTTLTKKIAEELTEYYIELGVKVKYMHSD IDTLERIEIIRALRKGEIDVIVGINLLREGLDIPEVSLVAIMEADKEGFLRSRRSLVQTI GRAARNVEGRVILYADIMTDSMKEAIIETERRRKIQKEYNAYNNIDPKSIVKEIAEDLIN LDYGIEDKKFENDKKVFRSKADIEKEIIKLEKKIKKLVGELDFEQAIVLRDEMLKLKELL LDF >gi|292606587|gb|ADGG01000023.1| GENE 9 8227 - 8721 378 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782397|ref|ZP_06747723.1| ## NR: gi|294782397|ref|ZP_06747723.1| hypothetical protein HMPREF0400_00366 [Fusobacterium sp. 1_1_41FAA] # 1 164 1 164 164 269 100.0 4e-71 MKNNKTFKIVGLVTNFNTLLLTTVITILAASGFIRDFSRVTIKSLVIGALILLILLLLSY VSWKNYFAIKEGIIIDIDKDEFTYPVKVKIWSFNENPRKTIPLSSIFAISSTFNMVRKIT SHFRPNYSVIIQSTEVNRPITCSFYKIENSQRLSGVLGASNSLR >gi|292606587|gb|ADGG01000023.1| GENE 10 8895 - 9953 1239 352 aa, chain + ## HITS:1 COG:FN1199 KEGG:ns NR:ns ## COG: FN1199 COG0389 # Protein_GI_number: 19704534 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 350 1 350 350 530 84.0 1e-150 MERIIMHYDMDAFYASIEINRNPKLKNKPLVVGENIVTTASYEARKYGIHSAMKVSDAKL LCPKLIAIPVDKKEYIRISNEIHNLILKITNKVEFIATDEGYIDLTGIVKPENKKQFALK FKERIKELTNLTCSVGIGFNKLSAKIASDINKPFGIYIFENEKDFIEYISDKKIKIIPGV GRKFSEILKHDKIFLVKDVFKYSLDYLVKKYGKSRGENLYCSVRGINHDEVEYEREIHSI GNEETYSIPLQTTSELEREFNSLFEYTYQRLIKNNVFSQSITVKIRYISFKTYTKSKKLK FATKDKDFLYNEMLELLNSFELEDEIRLLGIYFGDIKRNTLIQLSINKSLKK >gi|292606587|gb|ADGG01000023.1| GENE 11 10340 - 14068 4886 1242 aa, chain + ## HITS:1 COG:FN0990_1 KEGG:ns NR:ns ## COG: FN0990_1 COG0046 # Protein_GI_number: 19704325 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Fusobacterium nucleatum # 1 976 5 983 983 1732 92.0 0 MSDLRFFVEKKKGFDLDAKRLEKQLREELGIDIKDLRLINCYDIFNLSADKENVKKMILS EPVTDSITEELDLKGKKYFAVEFLPGQFDQRADSAIQCIDIVSTVKQNVDVLTSKIIILN DEITDEELNRIKKFYINPIEMREKDLSVLKKEEILFNSEVITYDNFTSLNDAEIEKMRTD LGLSMSFEDLKFVQDHYKEIGRNPTETEIKVLDTYWSDHCRHTTFETKINKVTFPNSEFG KQMEKEFNEYLKLKEDVSKKRAVSLMDMATIVAKYLKKEGKLDNLEVSEENNACSVYVDV EVEDFEGKKSIEKWLLMFKNETHNHPTEIEPFGGASTCLGGAIRDPLSGRAYVYQAIRVT GSGNPLETVEETLKGKLPQKKITTGAASGYASYGNQIGIATSLVSEIYHDGYKAKRMEVG AVVAAAPVENVVRKSPVPTDSIIIIGGKTGRDGCGGATGSSKEHNDKSLLLCEAEVQKGN APEERKIQRLFRNAEATKLIKKCNDFGAGGVSVAIGELADGVEVNLDLVPVKYDGLNGTE LAISESQERMAVIVSKEDTEKFLKFVDEENLLGTVVGYVTDKNRLTLNWKGKAIVDISRD FLNTNGVQQNIDIEVRDYENENVFEKFKTSDSSLEKKWLHNIKKLNVASQKGLVEMFDSS VGAGTILAPFGGKYQMSPTDVSIMKFPVLDKNTDTASAITWGFNPYISEWSTYHGAIYAV VESLAKLVAAGVDYKTARLSFQEYFEKLGKDAYKWSKPFLALLGAMKAQKDFDVAAIGGK DSMSGTFNDISVPPTLISFAVSPVNIHDVISTEFKKAKNKLYLVENKIDEKDFLFNSEEL KENFEFVLKNIKDKKIVSAMVIKMGGLAEALSKMSFGNRLGFEINNKEVDLFSLKLASIL IETTEELSYKNAIYLGEVSDKFEGKVNGENINLEEVESVWLNKLKPIFPYKLEEEVETYD IKNKISEKKIYKSSITVAKPRVVIAAFPGTNSEYDMYNRFNENGAEAKITLLRNLTQNHL AESVDQMCKDLRNSQIFVLPGGFSAGDEPDGSGKFMAAVLQNPKLMDEIKAFLGRDGLIL GVCNGFQALVKSGLLPYGEIGNVHENSPTLTFNKIGRHISQLVKTKIVTNNSPWLSSFEI GETFDIPVSHGEGRFYASDEVLKELFENGQIATQYVDFDLNATSEFRFNPNGSSLAIEGI ISPDGKIFGKMGHSERYSRDAFKNIPGNKDQNLILNGIKYFK >gi|292606587|gb|ADGG01000023.1| GENE 12 14081 - 14554 746 157 aa, chain + ## HITS:1 COG:FN0989 KEGG:ns NR:ns ## COG: FN0989 COG0041 # Protein_GI_number: 19704324 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Fusobacterium nucleatum # 1 157 1 157 157 278 96.0 3e-75 MKVGIIFGSKSDVDVMKGAADCLKKFGIEYTAHVLSAHRVPELLEETLEKFEKEDYGVII AGAGLAAHLPGVIASKTVLPVIGVPIKAAVEGLDALFSIVQMPKSIPVATVAINNSYNAG MLAVEILAVGNKDLRGKLLEFRKEMKEDFKKNIHVEL >gi|292606587|gb|ADGG01000023.1| GENE 13 14595 - 15308 1146 237 aa, chain + ## HITS:1 COG:FN0988 KEGG:ns NR:ns ## COG: FN0988 COG0152 # Protein_GI_number: 19704323 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Fusobacterium nucleatum # 1 237 1 237 237 425 96.0 1e-119 MEKGKFIYEGKAKQLYETDDKDLVIVHYKDDATAGNGAKKGTIHNKGVMNNEITTLIFNM LEEHGIKTHFVKKLNDRDQLCQRVTIFPLEVIVRNIIAGSMAKRVGIKEGTKINNTIFEI CYKNDDYGDPLINDHHAVAMGLATYDELKEIYDITGKINNLLKEKFDKIGITLVDFKIEF GKNSKGEILLADEITPDTCRLWDKETGEKLDKDRFRRDLGNIEEAYIEVVKRLTEAK >gi|292606587|gb|ADGG01000023.1| GENE 14 15355 - 16704 1850 449 aa, chain + ## HITS:1 COG:FN0987 KEGG:ns NR:ns ## COG: FN0987 COG0034 # Protein_GI_number: 19704322 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Fusobacterium nucleatum # 1 448 1 448 448 833 93.0 0 MGILALHSKKVRKDLVGIAYYGMYALQHRGQEGAGYTICDSKTNNEVRIKTVKNIGLVSD VFKVEDFQKYLGTILIAHTRYGSKNTVSIRNCQPIGGESAMGYISLVHNGDLSNREELKQ ELLNNGSLFQTSIDTEIILKFLSINGKYGYKEAVLKTVEKLKGCFALGIIINDKLIGVRD PEGLRPLCLGRIAEDDMYVLASESCALDAIGAEFVRDIEAGEMVVIDDNGVESIKYKEST KKASSFEYIYFGRPDSVIDGISVYDFRQQTGKYLYEQNPIEADIVIGVPDSGVPAAIGYA EASGIPYSAALLKNKYVGRTFIAPVQELRERAVRVKLNPIKELIKDKRVVVIDDSIVRGT TSKKLIDVLFEAGAKEVHFRSASPVVIEESYFGVNIDPNNKLMGSYMSIEEIRQAIGATT LDYLSSKNLKKILNGGEDFYTGCFKEDEE >gi|292606587|gb|ADGG01000023.1| GENE 15 16740 - 17771 821 343 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 8 335 13 339 356 320 49 2e-86 MGGIMINSYKDSGVDKEEGYKAVELMKKNVLKTHNKSVLTNLGSFGAMYELGQYKNPVLI SGTDGVGTKLEIAMKQKKYDTVGIDCVAMCVNDVLCHGAKPLFFLDYLACGKLDAEVAAQ LVSGVTEGCLQSYAALVGGETAEMPGFYQEGDYDIAGFCVGIVEKDNLIDGSKVKEGNKI IAVASSGFHSNGYSLVRKVFTDYNEKVSLKEYGENVTMGDVLLTPTKIYVKPILKVLEKF NVNGMAHITGGGLYENLPRCMGKDLSPVVFREKVRVPEIFKLIAERSKIKEEELFGTFNM GVGFTLVVEEKDVESIIELLTSLGETAYEIGHIEKGDHNLCLK >gi|292606587|gb|ADGG01000023.1| GENE 16 17759 - 18343 718 194 aa, chain + ## HITS:1 COG:CAC1394 KEGG:ns NR:ns ## COG: CAC1394 COG0299 # Protein_GI_number: 15894673 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Clostridium acetobutylicum # 8 191 3 186 204 172 52.0 4e-43 MSEINKKKIAVLVSGSGSNLQSIIDNVENGNLNCEITYVIADRECYALQRAEKHGIETLL LDRKIIDDKSVNEIIDSTLEGCKTDYIILAGYLSILNEKFIKKWDKRVMNIHPSLLPKFG GKGMYGIKVHEAVIKAGEKESGCTVHFVTNEIDAGEIITNVKVPVLEDDTPETLQKRVLE QEHKLLIKGIKKIL >gi|292606587|gb|ADGG01000023.1| GENE 17 18384 - 19898 2104 504 aa, chain + ## HITS:1 COG:FN0982 KEGG:ns NR:ns ## COG: FN0982 COG0138 # Protein_GI_number: 19704317 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Fusobacterium nucleatum # 1 504 1 504 504 911 94.0 0 MKKRALISVYDKTGILDFAKFLVSKGIEIISTGGTYKYLKENNIEVIEVSKITNFEEMLD GRVKTLHPNIHGGILALRDNEEHMRTLKERNIDTIDYVIVNLYPFFEKVKENLSFEEKIE FIDIGGPTMLRSAAKSFKDVVVISDVKDYELIKEEINNSDDVSYETRKRLAGKVFNLTSA YDAAISQFLLDEDFPEYLNVSYKKSMEMRYGENSHQKAAYYTDNMSDGAMKNFKQLNGKE LSYNNIRDMDLAWKVVSEFDEICCCAVKHSTPCGVALGDNVEEAYRKAYETDPVSIFGGI VAFNREVDEASAKLLNEIFLEIIIAPSFSNSALGILSKKKNIRLIECKDKPSDKKELIKV DGGILVQDTNNRLYEDLEVVTKAKPTSQEEKDLIFALKVVKFVKSNAIVVAKNLQTLGIG GGEVSRIWAAEKALERAKERFNTTDVVLSSDAFFPFRDVVELAAKNGVKAIIQPSGSVND KDSIEECDKNNISMIFSKLRHFKH >gi|292606587|gb|ADGG01000023.1| GENE 18 19918 - 20991 1053 357 aa, chain + ## HITS:1 COG:no KEGG:TDE0552 NR:ns ## KEGG: TDE0552 # Name: not_defined # Def: ankyrin repeateat-containing protein # Organism: T.denticola # Pathway: not_defined # 1 354 1 354 354 483 65.0 1e-135 MIKLKDIGSFKSIPEILDDIIKENISKLDEHLAKAWDINKNISISKYTDLSPLDCALIME AFESVKWLVEHGVNLNAKDRPSFLTAVRYCDEKIIQYLVSHGAKVNLTNNVKSDAFMEAI YGKNYKYLQLIHDLGHTVEKYGGKAFRNVVSDRNYDVLKFFISNGVDINYNEADMVYPFK PTPLCVAVRYVDLAMCKFLVENGADVTLTEKDGMRPYSIALEKGDIEMAEYFKSLEPLEY HNLQNKLDELKSFKLPKNLIEFLQGDKLHFELDDCDFKWIEFFSLIDTIPMKVGRQKLLR ISKATGDYEDIYIVWNPKTKKIVFYDMEHKELKDITDFVDFIENTSSYMQKIIEGDL >gi|292606587|gb|ADGG01000023.1| GENE 19 21014 - 22294 1844 426 aa, chain + ## HITS:1 COG:FN0981 KEGG:ns NR:ns ## COG: FN0981 COG0151 # Protein_GI_number: 19704316 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Fusobacterium nucleatum # 1 425 1 425 426 748 94.0 0 MKVLIVGSGGREHAIAWKISQNPKVNKIFAAPGNAYNKVIKNCENINLKTSNEILNFAIK EKVDLTIVGSEELLVDGIVDKFQENNLTIFGPNKEAAMLEGSKAFAKDFMQKYGVKTAKY QSFTDKEKAIKYLDEMSYPVVIKASGLAAGKGVVIAQNRKEAEDTLNDMMTNKVFAAAGD TVVIEEFLDGVEISVLSITDSEVIIPFISAKDHKKISEKETGLNTGGMGVIAPNPYYTKT IEEKFIQNILNPTLKGIKEEKMNFAGIIFFGLMVANGEVYLLEYNMRMGDPETQAVLPLM KSDFLDVINSALNKDLKNIKIDWENKSACCVVMAAGGYPVKYEKGNLISGLEKFDVSNSD NKVFFAGVKEENDKFYTNGGRVLNVVSIQDNLEKAIEAAYKNVKEISFKDNYCRKDIGTL YVPIKN >gi|292606587|gb|ADGG01000023.1| GENE 20 22493 - 22786 244 97 aa, chain - ## HITS:1 COG:FN0318 KEGG:ns NR:ns ## COG: FN0318 COG3697 # Protein_GI_number: 19703663 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Fusobacterium nucleatum # 12 84 95 167 171 108 84.0 3e-24 MNYLSLLIVQLKKIKNITIAIEESSQLGRLFDIDVIDVNFEKLSRKSFRKCLICEKQAQE CGRSRKHSIEELQNKVEEILENGLLQNLNLNSKVKNK >gi|292606587|gb|ADGG01000023.1| GENE 21 22722 - 23036 486 104 aa, chain - ## HITS:1 COG:FN0318 KEGG:ns NR:ns ## COG: FN0318 COG3697 # Protein_GI_number: 19703663 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Fusobacterium nucleatum # 1 98 1 98 171 135 80.0 2e-32 MQGVEVGIEEVLMCRERRVDIQNEMIKKYKMPLISFTMNIPGPIKTNQKIKKAFDIGKKL ILEKLKENNIEVLEIKELDENTGNELFISVDSTAEKNKKYNYCY >gi|292606587|gb|ADGG01000023.1| GENE 22 23050 - 24096 1041 348 aa, chain - ## HITS:1 COG:FN0319 KEGG:ns NR:ns ## COG: FN0319 COG3053 # Protein_GI_number: 19703664 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Fusobacterium nucleatum # 6 348 3 345 345 595 90.0 1e-170 MSEYNISKIYENDKRSFKLIDNLLAKEEIRRDKNLDYTCAMFDDDMNIIATGSCFKNSLR CLAVDNSHQGEGLMNQIVTHLVDYEFSRGLSHLFLYTKNKSMKFFKDLGFYEIINIENQI VFMENKRTGFSDYLDNLKKDMREGKEIASLIMNANPFTLGHQYLVEKAANENDILHLFIV SDDSSLVPFKVRKKLVIEGTKHLKNISYHETGDYIISSATFPSYFQKDEVAVIESQANLD IEIFTKIAKSLNINRRYVGEEPNSLVTNIYNQTMLKKLPENNIECVVVPRKKYSDKVISA STIRQIIKNGNLEDLKNLVPKTTYNYFLSDEAKPVIDKIRSQADVIHY >gi|292606587|gb|ADGG01000023.1| GENE 23 24204 - 25211 1263 335 aa, chain + ## HITS:1 COG:BS_yddN KEGG:ns NR:ns ## COG: BS_yddN COG2141 # Protein_GI_number: 16077571 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Bacillus subtilis # 4 333 2 329 339 275 45.0 1e-73 MENKKVKVSALNLVPQFQGETTIEAINRAVDLAKILEDLDYYRYWVAEHHNFRGVVSSAT ALLIQHILANTKKIKVGSGGVMLPNHSPLQVAETYGTLETLYPHRVDLGVGRAPGTDAET ASLIYRQKYANIHNFMEDILQLERYFGSEEEQGVVIANPGINTNVPIIILGSSTSSAYVA AELGLPYSFATHFAPAMAEEALSIYRKHFKASKYLDEPYFILGVLAHGADTDEEAEKLYT IAQQGSIRLLREEKGLYPLADEKFEENLNLSSAEKIFLKSRMGINLMGSKETMTKIWKEV KAKFDPDEVIAVSYMPKLEELEKSYRILKEVVENN >gi|292606587|gb|ADGG01000023.1| GENE 24 25403 - 26578 1211 391 aa, chain - ## HITS:1 COG:FN1140 KEGG:ns NR:ns ## COG: FN1140 COG3581 # Protein_GI_number: 19704475 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 391 13 403 407 719 91.0 0 MDIHFDLIAGVLKNEGYDVEVLKTDHRGVIEEGLKSVHNDMCYPALLVIGQFIDALKSGK YDTDNVALLLTQTGGGCRASNYIHLLRKALEINGFHKVKVLSLNFEGLDKKNEFSLSFKG YFNLFYSILYGDLLMSIYHQSVAYEENPGDSKNILAYWKEKLISEVGKKPFKKLKENYKK IIEHFLTIPKNLSKKKIRVGIVGEIYMKYSPLGNNHLTDYLEKEGVEAVNTGLLDFLLFN LYDTIFDRKIYGRKGLKYYFVKYVVGYIEKKQKEMIDVIKQYKSFIPPSPFAKVREMTKG YLGHGVKMGEGWLLTAEMLEFIEMGVKNIVCAQPFGCLPNHIIAKGMIRKIKDNHPEANI IAVDYDPGASSVNQENRIRLMLENARMLATE >gi|292606587|gb|ADGG01000023.1| GENE 25 26619 - 29546 3421 975 aa, chain - ## HITS:1 COG:FN1139_1 KEGG:ns NR:ns ## COG: FN1139_1 COG1924 # Protein_GI_number: 19704474 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 1 640 1 640 640 1206 93.0 0 MYYKIGIDVGSTTLKTVILNEKDEIIEKSYQRHFSKVREMTLEHFKSLKDLLNGKKFKLA ITGSAGLGISKDYGIPFVQEVFSTAGAVKKCYPQTDIVIELGGEDAKILFLKGAIEERMN GTCAGGTGAFIDQMASLLDMEVSELDKISFEHERIYPIASRCGVFAKTDVQPLLNQGAKK SDIAASIYQAVVEQTITGLAQGRPIKGTVIFLGGPLYFLKGLQERFVEVLKLSKEEAIFP ELAPYFVALGSAYFADTTEEIFDYDEVVNLLSQKKEKKVEHLENPLFTSEEEFETFLKRH QKVTVPTRDITTYSGRAYLGLDSGSTTIKVVLLDEDENILYRYYSSSKGNPVSLFLEQLK KIRELCGDRIEIVSSTVTGYGEELMQVAFGVDIGIVETIAHYTAAKHFNPNVDFIIDIGG QDIKCFHIKDGAIDSIVLNEACSSGCGSFLETFAKSLGYSTQDFAKKAIFSKSPAELGSR CTVFMNSSVKQAQKDGAEVEDISAGLARSVVKNAIFKVIRARDINDLGENIVVQGGTFLN NAVLRSFEQELGREVLRPEISELMGAYGAALYGKKVQKEKSKLLNLEELENFQHNSSPGM CKLCTNHCQLTINTFTNGEKFISGNKCERGAGKKLQSDLPNMVAYKNQLFNSIPLKAGGR AKIGLPRALNIYEMLPFWAELFCSLDCDVVLSKVSNRNLYMKGQNTIPSDTVCYPAKLVH GHIIDLLEKNVDAIFYPCMSYTFDEGISDNCYNCPVVAYYPELIQANISEVEKTNFLYPH LGIENHKLFAEQMYEEFKNIIPKLTKKEMEQATEKAFKTYHEYRETVRQEGSKVLKFAEE NNYPVIILASRPYHIDPEINHGLDRLLNSLQFVIVTEDALYPVEGKLTTKTLNQWGYHAR MYNAAKYVSQHKNMELVHLVSFGCGIDAITTDEIQDILRSKNKLYTQLKIDEVSNLGAAK IRLRSLQATMKEREM >gi|292606587|gb|ADGG01000023.1| GENE 26 29783 - 30208 836 141 aa, chain - ## HITS:1 COG:FN1138 KEGG:ns NR:ns ## COG: FN1138 COG3576 # Protein_GI_number: 19704473 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Fusobacterium nucleatum # 1 140 4 143 143 265 94.0 2e-71 MAKLTDAIKDLILNPVKEGAWTAQLGWIATVREDGAPNLGPKRSCRIYDDATLVWNENTA GEIMKDIERGSKVAIAFANWDKLDGYRFVGTAEVHKEGKYYDEAVEWAQGKMGVPKAAIV FHIEEVYTLKSGPNAGKRIDE >gi|292606587|gb|ADGG01000023.1| GENE 27 30341 - 31909 1173 522 aa, chain - ## HITS:1 COG:FN1137 KEGG:ns NR:ns ## COG: FN1137 COG3639 # Protein_GI_number: 19704472 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Fusobacterium nucleatum # 1 521 1 521 522 670 88.0 0 MTLDKFIKVHNTKTFLKILTIVIVLVLFFFTLNLDFQDYIDGFYRLKGLVAGMMRIESED KKIVLFKMFETIITAFASSFIGVLLAVLCSPFLATNISNKYLARFLTVCFSIFRTVPALV MAAILVSLIGIGSFTGFISLLIITFFSATKLLKEYLEEINPAKIQSFRSFGFSKFTFLRS CIYPFSKPYIISLFFLTLESSIRGASVLGMVGAGGIGEELWKNLSFLRYDKVSFIIVILL GFIFLTDTLSWFFRKKDNLIKITTSEGYKKSKFISNFVIIGVLILLVFSLNILYEDTNKI SAPIFFERLFTFFKKFRNLDFTYTGKALLALWQSFLVAFFATVFAAPSAIIVSYFANSVT SNKIIAFLIKIFINFIRTFPPVIVAILFFSGFGPGLISGFFALYLYTTGVITKVYVDVLE SVEVDYGLYGKSLGLRNFYIYLKLWLPSTYTNFVSIFLYRFESNMKNSSVLGMVGAGGIG QLLMNHIAFRNWEKVWVLLIFLIITIILIENLSEYIRNKVNK >gi|292606587|gb|ADGG01000023.1| GENE 28 31878 - 32621 224 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 226 1 219 223 90 25 3e-17 METIIEVKNLKKNYGDREILKDISFSIEKGEIISIIGESGAGKSTLMRCINGLEGINSGS IKFYDIDITKLKEKERNSIKKQMAYVFQDLNIIDNMYVIDNVLIPFLNRKNFIQVLLNRF SRAEYERALYCLEKVGISKLAYTKAKYLSGGEKQRVAIARSIAPNVDLILADEPISSLDE KNSFQIMEIFKRINAKKNKTIILNLHNVEIAKKFSDKILALKNGEIFFFKKSSEVNENDI RQVYQSS >gi|292606587|gb|ADGG01000023.1| GENE 29 32687 - 33568 1204 293 aa, chain - ## HITS:1 COG:FN1135 KEGG:ns NR:ns ## COG: FN1135 COG3221 # Protein_GI_number: 19704470 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 12 293 1 282 282 485 90.0 1e-137 MKLKKVWKLLALVSLIFLLISCGKKKEEKPLVMGLSPIANSEKLLEDAAPLYKMLGDDIG RPVEGYIATNYIGVVEALGTGTIDFALIPPFAYILANKKNGSEALLTSIGKNDEPGYYSV LLVRTDSGIEKVEDLKGKKVAFVDPSSTSGYIFPAVILMDHGIDVEQDVTYQFAGGHDKA LQLLINGDVDAIGTYESAITKFAKEFPEVTEKVKVLEKSDLIPGITLTVSSKLDDTTKQK IKDAFIKVTNSKEGQELTLKLFGIKGFEDAKVDNYKLIEDKLNKMGIDIEKVK >gi|292606587|gb|ADGG01000023.1| GENE 30 33708 - 34163 590 151 aa, chain - ## HITS:1 COG:FN1134 KEGG:ns NR:ns ## COG: FN1134 COG2731 # Protein_GI_number: 19704469 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Fusobacterium nucleatum # 1 151 5 155 155 217 76.0 7e-57 MIYGELKDIKNYKGVNKNLDKAIDFIADKKYLNADFGKNVIDGDKIYFNHPEKPTTRENI GLELEYHKKYADIHIVIEGEESIIYSPFVECVETKTYDMEDDYALVKGKTQVEFLMNAKN FLILFPEEPHLALLKVDEPKEIKKVIFKVEI >gi|292606587|gb|ADGG01000023.1| GENE 31 34283 - 35440 1724 385 aa, chain + ## HITS:1 COG:FN1133 KEGG:ns NR:ns ## COG: FN1133 COG1820 # Protein_GI_number: 19704468 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Fusobacterium nucleatum # 1 384 1 384 386 619 83.0 1e-177 MKKILLKNANLVLENKIEKATVLVCEDKIEKIFSKDSDLSQITYDELIDLDGKYLGPAFV DVHVHGADGADVMDMDEEALRRISKYLAKEGTANFLVTTLTSTKDELKNVLEIAGKLQNK EIDGANIFGVHMEGPYFAIEYKGAQNEKYIKPAGIEELEEYLSVKDGLVKLFSISPHTQE NLEAIKYLSDRGVVVSVGHSNATYEAVIKAVDYGLSHATHTYNAMKGFTHREPGVVGAVF NSDNIMAEIIFDKVHVHPEAVRTLIKIKGVDKVVCVTDAMSATGLAEGKYKLGELDVNVK DGQARLVSNNALAGSVLRMDIAFKNLIDLGYSITDAFKMTSTNAAKEFKLNSGLIKENKD ADLVVLDKDYNVCMTIVKGRVKYTK >gi|292606587|gb|ADGG01000023.1| GENE 32 35477 - 36451 990 324 aa, chain - ## HITS:1 COG:FN0637 KEGG:ns NR:ns ## COG: FN0637 COG2849 # Protein_GI_number: 19703972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 152 322 1 171 172 180 60.0 4e-45 MRGKNFILTTLVFLFISILGFAVENPNPLTPESVIAALDPDFAEGIKEYKPNLENIDKMF NYIEKNIKQKGRAIFYAKLDQEKKELIVTDENNKIIYIEKLPEKLVNSIPYFETKQTYSL KNGKTLEYSEATLGTFDKRIKIKNETLRKNRINKKDAIKALNLIGDMNKASQTGFSKIEY SNVEIFDENDNLILTAKFKNNKMIMEEEIEGDKVKMITYFDNFNTMNGKLEKYKNDTLVS TMQIKNSIPEGEFKVYYPSGKLLYIMNAKNGVLNGTAKSFYENGKIRMIGHFKDGKKDGE FIEYDEDGSIIDKALYKNDEMVSQ >gi|292606587|gb|ADGG01000023.1| GENE 33 36467 - 36838 548 123 aa, chain - ## HITS:1 COG:no KEGG:FN0638 NR:ns ## KEGG: FN0638 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 123 1 119 119 114 62.0 1e-24 MNKEILELVTKIFTFLKLEDYTKLTNILSMIEKEFPNYYKFFEKFKDKSMGEKASNVLSN IFETLTLGGTPLALLGKKAEKEEKEREIISEKNSLKNGIKEILKNYSDSSEEKRFLEFLS EKL >gi|292606587|gb|ADGG01000023.1| GENE 34 36831 - 37715 849 294 aa, chain - ## HITS:1 COG:FN0640 KEGG:ns NR:ns ## COG: FN0640 COG1266 # Protein_GI_number: 19703975 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Fusobacterium nucleatum # 1 293 1 293 293 336 74.0 4e-92 MTNKFQIYVDSIQSKSKLKLLLVPILVTILIIILNQLLIIPLVLFFNDNFKEVISFSGTS NLVTEIVSLFLAIFLITKISKLSTEQLGFSKDNIAVSYLKGAFFGTLQVLSVFLIIFCLN AIEVYYVANIPILIFIKILVFFVFQGLFEEILFRSYLMPFFSKVIGIKFTIILLSFLFTC IHLLNPNLSMIGLTNVFLAGVTFSLIYYYTGNLWLVGAMHTLWNFILGFVVGSYVSGIPT IYSIFFSVPIEGKDLISGGEFGFEASIVETILELGVSLFVIYLIKKEKKGENYE >gi|292606587|gb|ADGG01000023.1| GENE 35 37742 - 38389 668 215 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782421|ref|ZP_06747747.1| ## NR: gi|294782421|ref|ZP_06747747.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 215 1 215 215 375 100.0 1e-103 MFEKLNSRSAEIIKQSSTVYNLKWKRNIEFLLFGYENSGSGWYYILKNNEQISPTYHYSE INDIFLKNLQRIIDDIESGKYNNKKTPSEKIRLIVEERGLYSLMNNTKWKELITTIKEKI PDIPIKYKTLFEEDTPTYYWTMAGDEYFEYLNMKSIEWFRISCEIKEIKHRGRLIEDKVI IYDKRAEIYEILEKFNIPYQYDEIENAFVIYGYKN >gi|292606587|gb|ADGG01000023.1| GENE 36 38390 - 39850 1841 486 aa, chain - ## HITS:1 COG:FN0644_1 KEGG:ns NR:ns ## COG: FN0644_1 COG0007 # Protein_GI_number: 19703979 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Fusobacterium nucleatum # 1 251 1 251 251 457 91.0 1e-128 MKKGKAYIIGAGPGDFELLTIKAKRIIENADCIIYDRLISEDILRLPKKDAELIYLGKVN TEGGLIQDEINQTLVKKCLEGKSVARVKGGDPFVFGRGGEEVESLFQNEIDFDIIPGITS SISVPAYAGIPVTHRGIARSFHIFTGHTMENGKWHNFENIAKLEGTLVFLMGVKNLDLIV SDLIKYGKDSKTPVAIIEKGATKNQRVTVGNLENILELVEKNKILPPAITIIGEVVNLRE TFKWFESDKLAKRILVTRDKKQAVEMSENISKRGGIPVELPFIEIENLKIDLNNLSKYKA ILFNSPNGVKAFFENIKDIRSLANIKIGAVGVKTKEALEKNKIVPDFVPEEYLVDRLAED VVKYTEENDNILIVTSDISPCDTDKYNSLYKRNYEKVVAYNTKKLRVDREKVLETLKDID IITFLSSSTVEAFYESLDGDFFILGDKKIASIGPMTSETIRRLGMKVDYEAEKYTADGIL DEIFGA >gi|292606587|gb|ADGG01000023.1| GENE 37 39866 - 40771 1190 301 aa, chain - ## HITS:1 COG:FN0645 KEGG:ns NR:ns ## COG: FN0645 COG0181 # Protein_GI_number: 19703980 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Fusobacterium nucleatum # 1 298 1 298 298 511 87.0 1e-145 MKKNIIIGTRGSILALAQANLVKTSLEANYPDLTFEIKEIVTSGDKDLKSNWENSNASLK SFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNGFLVTLP QGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMA DKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKIFDG GCHTPMGCYSQVDEDKIKFIGAYSHDGKQIRVVIEDDLAKGKEIAHMAAEEIKAKINKGN L >gi|292606587|gb|ADGG01000023.1| GENE 38 40787 - 41788 964 333 aa, chain - ## HITS:1 COG:FN0646 KEGG:ns NR:ns ## COG: FN0646 COG0373 # Protein_GI_number: 19703981 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Fusobacterium nucleatum # 1 329 1 329 329 503 86.0 1e-142 MLDLDKIVVIGVSHENLSLLKREDFMRTRPKYIIEKLYKEKEINAYINLSTCLRTEFYIE LNSNISIDEIKKLFSVEMLSKTGIEAIEYLFKVSCGFYSVIKGEDQILAQVKSSHSEALE NEHSSKFLNIIFNKTIELGKKFRTKSMIAHNALSLEAISLKFIKNKFPNIEDKNIFILGI GELAQDILTLLSKEQLKNIYITNRTYHKAEQIKKQFEMVNIIDYKEKYKEMFEADVIISA TSAPHIVVEYDKFVPKMREDKDYLFIDLAVPRDVDERLANFKNIEICNLDDIWKVYNEHS MNRDKLLEDYSYLIDEQMKKLIKSLNYYKENSL >gi|292606587|gb|ADGG01000023.1| GENE 39 41941 - 42480 638 179 aa, chain - ## HITS:1 COG:BS_yrdC KEGG:ns NR:ns ## COG: BS_yrdC COG1335 # Protein_GI_number: 16079729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Bacillus subtilis # 2 178 5 181 187 130 41.0 9e-31 MEALIIIDMQKGFFKNILGKRNNLQAENNILRILENFRKENKEIIHIQHLSTDEKGILFS NEDRKFLKGFEPLSDEIVFQKHVNSAFIGTNLENYLRDKSIDKLIVVGMTLAHCVSTTVR MAANLGFKVILIEDATITFEIADYFSDKLLSADEIHKYHISALNEEFCEILSAKNFLNL >gi|292606587|gb|ADGG01000023.1| GENE 40 42894 - 43880 1025 328 aa, chain - ## HITS:1 COG:FN0837 KEGG:ns NR:ns ## COG: FN0837 COG0582 # Protein_GI_number: 19704172 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Fusobacterium nucleatum # 1 328 1 328 328 519 93.0 1e-147 MEIKKIDERDLVVNQRKKRNQDKKKTIFEIYKSEKTVKDYMFHLKDFLHFVYEGENDFSI SEVIPLMQDIEKEDVEAYIVHLFEDRKLKKTSVNTILSALKSLYKELESNGLKNPVKYIK LFKVNRNIENVLKVSIDDIRKIIGLYKIDSEKKYRNITILYTLFYTGMRSKELLTLQFKH FLRREDEYFFKLVQTKSGKDVYKPIHKSLVKKLEEYRSYLMNMYSLDSKDLDEHYIFATS VLNNSPLSYRSLNVIIQDMGKLIEKDISPHNIRHAIATELSLNGADILEIRDFLGHSDTK VTEVYINARSVLEKKVLEKLPEINLDEE >gi|292606587|gb|ADGG01000023.1| GENE 41 44018 - 45103 1051 361 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0718 NR:ns ## KEGG: Lebu_0718 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 354 1 366 439 311 50.0 2e-83 MLFNKKEKNLSVEIIDIKLDTSTIPSIKEARLVHINGKAKLVKDMGKYDDNYTSPYQIKL NDVPLLQAKIPNCPTCCSLLATGYGIENANCEELLDIQENINSNYISLEKSIRDIEPLLT LFETGFYLIADAICYPTDGDKNFFWNIPNKLEKENYFEYIYGQPVYLYPTQTTDSYDKNR VEYYIDKFIELDDSSPRTIVYNFTDYINFIIDGHHKACASALLGEPLRCILIIPAIVTKY YNVLEEKNETYLDFSSIKVSQAEIPEKYLPFVKEKRFKSKKKEIIIEDGSLNKREWEKEY LDSVKNYINLYNYAKIIDILRKEKININNNLMEEYLSNFDLDTQNKMKKIIYKLKVFDME K >gi|292606587|gb|ADGG01000023.1| GENE 42 45116 - 45412 538 98 aa, chain - ## HITS:1 COG:no KEGG:FN0836 NR:ns ## KEGG: FN0836 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 98 1 98 98 163 90.0 2e-39 MLNHIVMWKIKEDVEDKEKVKLDIKNGLEGLFGKIKELREIRVETFMETTSTHDIALFVK VDNEETLKNYATNPLHVEVVKNYIKPFVYDRVCIDFFE >gi|292606587|gb|ADGG01000023.1| GENE 43 45431 - 46099 951 222 aa, chain - ## HITS:1 COG:no KEGG:FN0835 NR:ns ## KEGG: FN0835 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 26 222 1 198 198 277 72.0 2e-73 MNTWNEIFSANLGKIMAIQTACAEYVVKNRDWNIDFDRGIISFGKDEYPLQFLGSEATSS NTWLWAWENISEFDDKIISLAREIKAKGEKLNLEALTTAEINISDELNGHTLSIVACGLA DKNYCYYRDPYSDGAIFVAFDGVDEKVFKPIDAKDFADIVVNSIQQFPLNHKLFVESFLS WNKNKYEWKENTLIANFKDSKLEIDFEEKTELARIINIRLNS >gi|292606587|gb|ADGG01000023.1| GENE 44 46112 - 46651 768 179 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0139 NR:ns ## KEGG: Sterm_0139 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 31 149 56 166 171 66 36.0 5e-10 MNKVYNEIKEFLENPVDNMENFFNSRAITWIDWREYDEDIIGYFNGLLAHDDIIELETKE IDLGRGIDLILKKDNKVLTIPYEDDETDRDITIKTLDEFISPKYQIRLFSESLGDDTLAF TVLNSNEWKDLENEFGKEKLEFFFTPVSQFKGIFNMSMKEVKKIYTEREVLRDKIFKNN >gi|292606587|gb|ADGG01000023.1| GENE 45 46840 - 47103 267 87 aa, chain + ## HITS:1 COG:no KEGG:SGO_1740 NR:ns ## KEGG: SGO_1740 # Name: not_defined # Def: integral membrane protein # Organism: S.gordonii # Pathway: not_defined # 1 87 1 87 87 128 80.0 8e-29 MTKSKFNAIVGSIGAFIGIFVFISYIPQIIANLNGAKSQPLQPLFAAVSCLIWVIYGWTK EPKKDYILIAPNLAGVILGTITFLTAL >gi|292606587|gb|ADGG01000023.1| GENE 46 47147 - 48646 1915 499 aa, chain - ## HITS:1 COG:no KEGG:FN0834 NR:ns ## KEGG: FN0834 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 497 1 505 511 519 58.0 1e-145 MKKIGIIILLTFSFLLLTNCNKGKNEEVKNEKIKFSKESYDLFEKFATDKKETIEKLKSL NKEEANNLYEEYQAQNNHTLYDIEDALAGFLDSIYNDTNGENFTDKDWADANKILNKYDL ELWDIGEGMVTIRELPHLYYDVFKDYVTDDYKEYLKIWAKDSEELYQADAGLLVSFEEIG ERIVTWENFLNKYPNSTLKPKVTALLNSYREDYLLGMENTPTLDGGYDNIPITVDEVAKK EYDRFMKKYPNSPTVELIKYFLENYQNNNIYDLIRNKILNEFELDLTKEALSENLGRVLA IQDNFNEKIFTSADWTVNLDDNTFSNAKEKYPIEFIGTAILKENGETIWIWEDSSLATEI QATAGNNAIPILTYNSFELPKNMSANAFVSLACGILHDKIAFSGIDYTEKGGMYYFVVSK LPETVFSPVAIKKFADITELAIKNYDIDHKIFVENFLEWNKTKYEWQGDKIIADFGNEDK LEIQFEKIEDEYKIKEIIL >gi|292606587|gb|ADGG01000023.1| GENE 47 48643 - 50265 1855 540 aa, chain - ## HITS:1 COG:no KEGG:FN0833 NR:ns ## KEGG: FN0833 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 535 17 536 539 465 58.0 1e-129 MKKILLILFTVAIFAIGSIFGYKKILSIEKENKIIQLFNKDSLENFSKNKNEMLEKLKTL NKEEADELYEQYLESNNTILENLNIEHDKLLSGGIYNNEDTSENFTDEEWKIANKFLNKY DLELWYLARGTCIIKEVPDFYYKTFKDYVTDDYKEYLKITSKENEEHYVADSGLCITLEE LGDRIVTWENFLEKYPNSKLNDKVNNICNSYRRDYILGVPGGIYDYRESAEEYNRFIKKY PDSPTTELLGYYLEEVNLDEPENNDSEDLSKMIDEYIEKYFYLGSLENRKKGNLFSEQTN TLLKEFNKNKEEVINKLKTLNKEEANKFYEDYLESNNEILEKMNENDYDMLDNAFYIGEG DIDKEKLNKQNKFLYNYGLEVIEIEEGFMLTEKKNFYYNIFKNYVSDDYKDFLKLRSEDI EYIDYLSSINEHPEIVADKVINWEKFLEKYPDSKLKKKANDICYSYRGDYIIALTSLPTT EALKNGKINEDVKELNRFIKKYPNSPTTEIIKYYLENYKNENINDMLVDKNEEIYNRGNK >gi|292606587|gb|ADGG01000023.1| GENE 48 50266 - 51213 1226 315 aa, chain - ## HITS:1 COG:no KEGG:FN0833 NR:ns ## KEGG: FN0833 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 283 17 282 539 257 55.0 5e-67 MKKFLLFLFVIAIFAIGGLYGYKKLHSDERKNEIIQMFNKELLNDFVESKKSVMERLKTA KDKEEGNKIYNEYVATNKLMLEKINEAHSELLENVFMADSKYNFTPEEWKTVNNYLKDYD LELIDMGEGNAMIAQVPNFYYDIFKDYVTDDYRDYLELVKKEYSEPYFGIEEILVSHEKI ADRLLAWEDFQKKYPNSDFLAEADIEANVYRRAYILGAYNLHTREGGSENPELYYIPDNI LKEFNRFIQANPDSPTVEYINFYLENLKNPNIEEILYDKFEKEIVKDYELENSNEPVMKD TLEVITEEDKESKGE >gi|292606587|gb|ADGG01000023.1| GENE 49 51312 - 51776 598 154 aa, chain - ## HITS:1 COG:no KEGG:FN0832 NR:ns ## KEGG: FN0832 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 154 1 154 154 287 94.0 8e-77 MGLMDLVKKAFLGATDEENQKNKARMREIFNESVPNGDDYKLIYCHSEDTTNAVVVKVTK HNNFIVGYKEGEVVVIPVNPDLLDYGKAIIFNRKNESHTEASFGFCKVSNPETTLYFHPI TYEPALAGKGKYSVAVTQSSAEVAEFKNFFKKGL >gi|292606587|gb|ADGG01000023.1| GENE 50 52369 - 52647 230 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782434|ref|ZP_06747760.1| ## NR: gi|294782434|ref|ZP_06747760.1| nitrite/sulfite reductase-like protein [Fusobacterium sp. 1_1_41FAA] # 1 92 1 92 92 161 100.0 1e-38 MGQELNLIAGNYICGKDFIAGTYDIELIKNYGYITIREKKNVSNIKFRKYLGENIGELKD FKNCSIEIEEKVEISGGLEVKLTPSKSTYLYN >gi|292606587|gb|ADGG01000023.1| GENE 51 52920 - 53420 723 166 aa, chain - ## HITS:1 COG:no KEGG:FN0600 NR:ns ## KEGG: FN0600 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 166 1 166 166 231 88.0 5e-60 MKLTLQQAIFTISNLSKKQRRLLDLIRDSYVVPLKVNGTEVFEQAQADEMLKNLSELDLI NQDIVTLKDGINVANTENFIENKSLFALLEEVRLKRNILFDLEYLLKRDSTTVENGVGVV QYGVLNKKELAEKFNKLENEVNSLSEKIDSVNAKTEIEVKLFSSID >gi|292606587|gb|ADGG01000023.1| GENE 52 53494 - 53964 547 156 aa, chain - ## HITS:1 COG:FN0601 KEGG:ns NR:ns ## COG: FN0601 COG2849 # Protein_GI_number: 19703936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 16 154 1 139 141 217 85.0 7e-57 MKRKLLLVAFALLFSVSAISNSQEIRKKDLRIVEKLYYLKDSDVPFTGKVSEGRDRLYYL NGKQDGKWISFYKNGNIKSIINWKDGKLNGKYIIYENNGTKSTETIYKDGKENGVYFLYN TNGTYRTKGAYIMGRPVGLWEYYDKDGKLKDKVIVN >gi|292606587|gb|ADGG01000023.1| GENE 53 53983 - 55785 2163 600 aa, chain - ## HITS:1 COG:FN0887 KEGG:ns NR:ns ## COG: FN0887 COG1164 # Protein_GI_number: 19704222 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 1 600 1 600 600 1003 90.0 0 MKDRKTIEQKYKWNLNDIYENYDMWESDLEKFEKLTKEVPKYKGQIKNSSEKFVELELLM EKIARLLDRLYLYPYMLKDLDSTDEMTSIKMQEIEMIYTKFGTETAWIAPEMLEIPEETM NEWIKKHPELEERRFGLSEMYRLRKHVLSEDKEQLLSHFSQFMGSSSDIYGELSISDMKW NTVKLSTGEELAVSNGVYSKILATNRNQEDRKLAFEALYKSYENSKNTFAAIYRAIIQQN VASCNARSYESCLDRALENKNIPKEVYFSLVNSAQENTAPLRRYIELRKKALKLKEYHYY DNSINIVDYNKVFKYDDAKEIVLNSVKPLGEDYQAKMKRAISEGWLDVFETKNKRSGAYS INIYDVHPYMLLNYQETMDAVFTLAHELGHTLHSMHSSEAQPYSTADYTIFVAEVASTFN ERLLLDYMLENSDDSLEKIALLEQALGNIVGTYYIQTLFASYEYEAHKMIEEYKAITPDI LSDIMYNLFKKYFGESITIDELQKIIWSRIPHFFRSPFYVYQYATSFASSAKLYENLKTN PESREKYLTLLKSGGNNHPMEQLKLAGVDLTKKESFDSVAKEFDRLLDVLEEELKKINLI >gi|292606587|gb|ADGG01000023.1| GENE 54 56047 - 56697 847 216 aa, chain + ## HITS:1 COG:no KEGG:FN0997 NR:ns ## KEGG: FN0997 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 216 1 216 216 330 73.0 2e-89 MTKQKYYAYFFDDKRNGIVESWTECEKIVKGTKARYKSFIDKSVAQNWLDSGANYERKMS STTPINTKLEKGIYFDSGTGRGIGVEVRITDENKVSFLETLPKETVKKILKGTNWSVNEY GNIYLGANRTNNFGELVGLYFALEIAKILDCTLILGDSRLVIDYWSLGHFHENNLELDTI SYINKVIVMRKEFEKNKGVIKHISGDINPADLGFHK >gi|292606587|gb|ADGG01000023.1| GENE 55 56710 - 57411 564 233 aa, chain + ## HITS:1 COG:FN0996 KEGG:ns NR:ns ## COG: FN0996 COG5522 # Protein_GI_number: 19704331 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Fusobacterium nucleatum # 1 233 1 232 232 288 72.0 8e-78 MGDKFVLFSDPHLITMGIGFGVCFLLIFLGFFTERKQGFAKIIAVLVLGVKIAELIYRYK YYGESVVQLLPLHLCPLVIVISIFMMFFHSEVLFQLVYFWCMGAFFAIIMPDIKEGMHDF ASQSFFITHFFILFSAAYAFIHFRFRPTKTGFIMSFLILVSLAFAMYFVNIKLGTNYLFV NRPPSSAAKLIDYVGPWPYYLYSIVGIYILLSFILYLPFKRNKKSKYGSWKKY >gi|292606587|gb|ADGG01000023.1| GENE 56 57563 - 57835 501 90 aa, chain + ## HITS:1 COG:FN0676 KEGG:ns NR:ns ## COG: FN0676 COG0234 # Protein_GI_number: 19704011 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Fusobacterium nucleatum # 1 89 1 89 90 125 84.0 2e-29 MNIRPIGERVLIKPIKKEEKTKSGILLSSKTAPAEKPNQAEVIALGKGEKLEGIKVGDKV IFNRFSGNEIEDGEEKYLVVNAEDILAVIE >gi|292606587|gb|ADGG01000023.1| GENE 57 57851 - 59470 1597 539 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 539 3 547 547 619 59 1e-176 MAKIINFNDEARKKLETGVNILADAVKVTLGPRGRNVVLEKSYGAPLITNDGVTIAKEIE LEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPIFLKKGIE LAAKEAIEVLKDKAKKIESNEEISQVASISAGDEEIGKLIAQAMEKVGETGVITVEEAKS LETTLETVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEQTVQ MSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVIS EEKGMKLEEASIEQLGRAKTVKVTKDLTVIVDGAGEQKDISARVNLIKSQIEETTSDYDK EKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILLDI IDSMKEFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDAKNE KYVNMIESGIIDPAKVTRAAIQNSTSVASLLLTTEVVIAHKKEEEKASMGAGGMMPGMM >gi|292606587|gb|ADGG01000023.1| GENE 58 59483 - 60943 1985 486 aa, chain + ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 1 486 1 486 486 761 80.0 0 MSNKLVNLKPERVFYYFEELSKIPRESGNEKAVSDFLVDTAKKLGLEVYQDKMNNIVIKK AASKNYENSPGVILQGHMDMVCEKDLDSNHNFKTDGIDLIVDGNYLRANKTTLGADNGIA VAMGLAVLEDNTIEHPQIELLVTVEEETTMGGALGLEDNILTGKMLINIDSEEEAWVTVG SAGGRTIRAIFDDKKEKLNITNPEFFRLEVKNLFGGHSGAEIHKNRLNANKVISELIIQL KKEFDIRLCDVKGGSKDNAIPRECYFDVAIDKDASESFTLKVKEVFENFKNKYKAQDENI TFEITKLENSSNEAFSNDVFERLLSLINTLPTGVNTWLKEYPDIVESSDNLAIVKLIDDK ITIITSLRSSEPSILDSLEEKIVNIIKEHKVNYEVGEGYPEWRFRPVSHLRDTAVKTYKD LFNEDMQVTVIHAGLECGAISTHYPDLDMISIGPNIYDVHTPKEKMEIASVEKYYKYLVE LLKNLK >gi|292606587|gb|ADGG01000023.1| GENE 59 60984 - 61559 678 191 aa, chain - ## HITS:1 COG:FN1303 KEGG:ns NR:ns ## COG: FN1303 COG2096 # Protein_GI_number: 19704638 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 191 1 192 192 325 90.0 3e-89 MEDKKYVNITKVYTKRGDKGETDLLGGSSARKDSLKVEAYGCIDETSSFIGLARYYTKNK IIKERLKEIQNKLLVLGGFLASDDKGKEMMKDQIKEEDIKLLEGYIDEYNQKLPPLTHFI LPGDDEVAAHFHVARTVVRRAERRIVSLATQEDLNPLIQKYVNRLSDLMFVLARYSEEVE NKKWKSTNLNI >gi|292606587|gb|ADGG01000023.1| GENE 60 61572 - 62036 673 154 aa, chain - ## HITS:1 COG:FN1304 KEGG:ns NR:ns ## COG: FN1304 COG0629 # Protein_GI_number: 19704639 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Fusobacterium nucleatum # 1 154 1 154 154 186 69.0 2e-47 MNLVVLNGRLVRDPELKFGQSGKAYSRFSIAVDRPFQTSTDSQTADFINCVAFGKTAEFI GEYFRKGRKILLKGSLQMNQYESEGKKLTTYVVIAENVEFGEAKANVNTEGNDFKGTRVS TEKQSNFEELHSEDFQSADDDMESAPVADDEFPF >gi|292606587|gb|ADGG01000023.1| GENE 61 62111 - 62839 253 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 205 1 216 223 102 29 1e-20 MKKTLEIKNLSYSFGDNHILKDINICVKENEMVAIVGSSGVGKSTLFNLIAGVLKKQNGE ITINGSDDYIGKVAYMLQKDLLFEHKTIINNIILPLIIAKIDKKVALEEGRKILKQFNLE KYADKYPKQLSGGMRQRVALIRTYMFKRNIFLLDEAFSALDAITKKELHKWYLNLKNEFN LTTLLITHDIEEAIFLSDRIYILANKPGEIIKEIKIEINPNEDIDVQRLFYKKEILNIMN IE >gi|292606587|gb|ADGG01000023.1| GENE 62 62849 - 63853 1538 334 aa, chain - ## HITS:1 COG:FN0236 KEGG:ns NR:ns ## COG: FN0236 COG0715 # Protein_GI_number: 19703581 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Fusobacterium nucleatum # 1 334 1 334 334 578 93.0 1e-165 MKKIKYLLFGIFTIFMLAACGEKKEEAKTEAPVELKKVDFLLDWVPNTNHTGLFVAKEKG YFAEEGIDLDIKQPANESTSDLIINNKAPMGVYFQDYMASKLAKGAPITAIAAIIENNTS GIITNKNLNINSPKELAGHKYGTWDIPIELNMLQFIMEKDGGDYSKVELVPNTDDNSITP LSNGVFDAAPVYYAWDKIMGDSLNIETNFFYYKDYAPELNFYSPVIIANNDYLKDNKEET IKILRAIKKGYQYAIEHPEEAAEILIKYAPELENKKAMIIESQKYLASQYATDKDKWGYI DPVRWNAFYNWLNEKGLTKNPISENTGFSNDYLE >gi|292606587|gb|ADGG01000023.1| GENE 63 63840 - 64613 644 257 aa, chain - ## HITS:1 COG:FN0237 KEGG:ns NR:ns ## COG: FN0237 COG0600 # Protein_GI_number: 19703582 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Fusobacterium nucleatum # 17 257 1 241 241 406 94.0 1e-113 MKKFLNRNISFISIIILITVWQVCGNLGLLPKFIFPTPLEIANAFVRDRALFLFHFKITM LEALIGLALGIFFACLLAIIMDSFEMINKIVYPLLIFTQTIPTIALAPILVLWLGYDMTP KIVLIVINTTFPIIISILDGFRHCDKDAIQLLKLMNASRWQILYHLKIPTALTYFYAGLR VSVSYAFISAVVSEWLGGFEGLGVFMIRAKKAFDYDTMFAIIILVSAISLISMELVKRSE KKFIKWKYLEEEENEKD >gi|292606587|gb|ADGG01000023.1| GENE 64 64795 - 65715 1204 306 aa, chain - ## HITS:1 COG:FN0238 KEGG:ns NR:ns ## COG: FN0238 COG4874 # Protein_GI_number: 19703583 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria containing a pentein-type domain # Organism: Fusobacterium nucleatum # 1 306 5 310 310 498 84.0 1e-141 MKKNITNKILMVRPALFAFNEETAVNNYYQKRDNKTVQEIQNSALIEFDKMVEKLKNIGI DVKVIQDTKEPHTPDSIFPNNWFTTHYSNTVVLYPMFAENRRLERTDRIYEFFDNVDNLN VVDYSSLEKENIFLEGTGALVLDRKNKKAYCSLSQRADEKLLDIFCEDAGYKKIAFHSYQ TINEERKAIYHTNVMMAMGENYAILCADSIDNLEERAAVINELEKDKKEIVYISEQQVEN FLGNTIELVNNEGVNVCVMSATAYSALTEEQKNIIEKYDVILPVDVHTIEKYGGGSARCM IAELFI >gi|292606587|gb|ADGG01000023.1| GENE 65 65742 - 66635 1243 297 aa, chain - ## HITS:1 COG:FN0270 KEGG:ns NR:ns ## COG: FN0270 COG1159 # Protein_GI_number: 19703615 # Func_class: R General function prediction only # Function: GTPase # Organism: Fusobacterium nucleatum # 1 296 1 296 296 484 92.0 1e-137 MKAGFIAIVGRPNVGKSTLINKMVAEKVAIVSDKAGTTRDNIKGILNVKDNQYIFIDTPG IHKPQHLLGEYMTNIAVNILKDVDIILFLIDASKTIGTGDMFVMDRINENSNKPKILLVN KVDLISDEQKEEKLKEIEEKLGKFDKIIFASAMYSFGIAQLLEALDPYLEEGVKYYPDDM YTDMSTYRIITEIVREKILLKTRDEIPHSVAVEIIDVERNEGKKDKFNINIYVERDSQKG IIIGKNGKMLKDIGMEARQEIEDLLGEKIYLGLWVKVKDDWRKKKPFLKEMGYVEEK >gi|292606587|gb|ADGG01000023.1| GENE 66 66635 - 67402 724 255 aa, chain - ## HITS:1 COG:FN0269 KEGG:ns NR:ns ## COG: FN0269 COG0582 # Protein_GI_number: 19703614 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Fusobacterium nucleatum # 16 254 1 240 241 236 65.0 4e-62 MRSNVDILKKYIENLVIKKNLLDSSVEAYKLDISEYLTFLENKEKDIFNSNEDLFIEYFK EIEDKYSVASFKRKYSTIRNFYKFLLKNRYIDKIFEYKLTKKTNDKVSKENRTEVFKKNE YEAYINSLSDNFNEVRLKLISRMIAEAKISLINIFEIEIKDLLKYNFEKIIVFRNSKIVT YEISAEISKELKEYYEKYAIEKRYLFGSYKKSSLISDLKRYNLDFKTLKNCLQEDEEEIN KKIREIYFKIGIGDN >gi|292606587|gb|ADGG01000023.1| GENE 67 67392 - 69053 2219 553 aa, chain - ## HITS:1 COG:FN0268 KEGG:ns NR:ns ## COG: FN0268 COG0497 # Protein_GI_number: 19703613 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 553 6 558 558 758 89.0 0 MLRELKIENLAIIDELDIEFEKGFIVLTGETGAGKSIILSGINLLIGEKASVDMIRDGEE NLVAQGVFDVDEEQKKKLEVMGIDTDGDEIIIRRYYNRNGKARAFVNNVRITLADLKEIA STLVDIVGQHSHQMLLNRNNHIKLLDSFLTKDDKDIKEKLSSLLSQYREIKSRIEKIESE KKETLEKKEFYEYQLEEIEKLKLKDGEDEILEAEYKKVFNAEKIREKVYESLEYLKYDDD SALGFILESIKNIEYLGKYDERYLELAKRMESAYYELEDCVGEIEDISKNIEVTESDLDK IAGRMNTLKRIKEKYKRTLAELIEYREDLKEKLSDMNSGDFKTRELQKELDKIKAEYDKL AEKLSKSRKEIALKIEDELLNELKFLNMEDAKLKVQMNKVDRMTNDGYDEIEFFISTNIG QELKPLNKIASGGEVSRVMLALKVIFSKVDNIPILIFDEIDTGIGGETVRKIALKLKEIG DSTQIISITHSPVIASKASQQFYIEKYVENSKTISRVKKLSANERIKEIGRMLVGEKIND EVLEIANKMLNEV >gi|292606587|gb|ADGG01000023.1| GENE 68 69047 - 69850 912 267 aa, chain - ## HITS:1 COG:FN0267 KEGG:ns NR:ns ## COG: FN0267 COG0061 # Protein_GI_number: 19703612 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Fusobacterium nucleatum # 1 267 1 267 267 390 80.0 1e-108 MIKLSIIYNNEKESAINIYKELLEFLKSKKEFEILDEENLYKANYIVIIGGDGTLLRAFR NIKNKKAKIIAINSGTLGYLTEIRKDKYKEIFENIQKNKISIEERFFFMVSIGNKKYKAL NEVFLTRDTIKRNIVASEIYVDDKFLGKFKGDGVIISTPTGSTAYSLSAGGPIVTPEQKL FIITPIAPHNLNTRPIILSGDVKLVLTLSEPSQLGLVNIDGHTHKTIKLEDKVEIFYSKE SLKIVIPEARNYYDVLREKLKWGENLC >gi|292606587|gb|ADGG01000023.1| GENE 69 69863 - 71353 2222 496 aa, chain - ## HITS:1 COG:FN0266 KEGG:ns NR:ns ## COG: FN0266 COG4942 # Protein_GI_number: 19703611 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Fusobacterium nucleatum # 12 234 6 230 403 236 78.0 6e-62 MMNLKITTFSKLFLFFLISANVNSTTVKDMNKRLKNIDQEIEKKNTRIKAIDTETSQIEK KIKDTEVEIEKMAQERKEIEEEITIVKKNIDYGRKNLEISEDEHNRKESEFIAKIIAWDK YSKVHRKDLPEKVILMKNYREVLYGDLQRMGYIEKVTGNIKENQDKIETEKIKLDKLEAQ LRENARKMDAKKEEQKKLKEKLQVEKKNHQSSIEKLKKEKQRISKEIERIIIENARKAAE KAAKEKAERERIAREKAARERAEREKAIREKAAREKAAREKAAKEKAERERIAREKAAKE AEAKKNSTKPSDNKIKTPTKSVEVPIVVDTSDIELEEKREIEKLREEEKQELREIKVATT VDMQKISNPEAYKRIGKTIKPLNGQIVVYFRQKKAGVVESNGIEIRGKVGNPVVAAKGGT VIYASNFEGLGKVVMIDYGEGMIGVYGNLLAIKVGYNSRVSAGQAIGVLGLSSEKEPNLY YELRANLRAIDPLPTF >gi|292606587|gb|ADGG01000023.1| GENE 70 71325 - 72254 1161 309 aa, chain - ## HITS:1 COG:FN0265 KEGG:ns NR:ns ## COG: FN0265 COG2177 # Protein_GI_number: 19703610 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Fusobacterium nucleatum # 1 278 1 278 308 389 75.0 1e-108 MYKLFGYGLKDIPYINRLKNRVFYIIVITIVSLNIFISFSLNLKKVSNETLINSFIIVDL KNNLDEEKRNEIEKYILTIDGVRSVRFMDKSESFKNLQNELNISIPEASNPLTDSLIVSV KGAELMNGVQEIIEAREEVKEVYKDEPYLKQSQEQSYIIYIAQIGSAIFSFLIALVTIVI FNLGVAIEFLNNANTGLDYRENIKNSKLKNLIPFSMSSIVATLIFFNIYVFFRKYVTNAN FDSSLLSLKEIFLWHIGAIGILNFLVWLIPANLGRIEYEEENDDDLEYEFYEDNDKKDEF YDEFEDYDI >gi|292606587|gb|ADGG01000023.1| GENE 71 72405 - 72791 616 128 aa, chain - ## HITS:1 COG:no KEGG:FN0264 NR:ns ## KEGG: FN0264 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 128 1 129 129 112 92.0 4e-24 MKKFLLLAVLALSASAFAANTADLVGELQALDAEYQNLASQEEARFNEERAQADAARQAL AQNEQVYNELSQRAQRLQAEANTRFYKSQYEELASKYEDALKKLEGEMEQQKQVISDFEK IQALRAGN >gi|292606587|gb|ADGG01000023.1| GENE 72 72911 - 73570 1014 219 aa, chain - ## HITS:1 COG:FN0263 KEGG:ns NR:ns ## COG: FN0263 COG0760 # Protein_GI_number: 19703608 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Fusobacterium nucleatum # 1 218 5 221 231 206 65.0 4e-53 MEDDKVLHNILLKKAKEAEYSNFEIEQINLQTETLFIRYFLEREAAKVVEETKIEDEVLK KIYDENKEFYTFPEKVKLDTIFVKEKEKAEELLKIVNVGNFNEIKEKNDEKTDATQKDVD DNFIFITDIHPAIAEELLKENRKDVIIENLIPVQEGFHIVYLKDKEDAKQATFEEAKETI LNDVKRNLFGQVYNQIITDIANEKLTLETNDTKEEATEK >gi|292606587|gb|ADGG01000023.1| GENE 73 73884 - 76115 3491 743 aa, chain + ## HITS:1 COG:FN0262 KEGG:ns NR:ns ## COG: FN0262 COG1882 # Protein_GI_number: 19703607 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Fusobacterium nucleatum # 1 743 1 743 743 1476 96.0 0 MDAWRGFKSGDWQNNINVSDFIKHNYTEYTGDEAFLEGPTENTKKLWDILSGMLKIEREK GIYDAETKIPSKIDAYGAGYIDKNLETIVGLQTDAPLKRAIFPNGGLRMVENSLEAFGYK LDPTTKEIYEKYRKSHNAGVFSAYTPAIKAARHTGIITGLPDAYGRGRIIGDYRRVALYG VDRLIAERKREFDAYDPAEMTEDVIRDREEMFEQLEALKALKRMAAAYGFDIGRPAETAQ EAVQWTYFGYLGAIKDQNGAAMSLGKTAGFLDVYIERDLKEGRITERDAQEFIDHFIMKL RIVRFLRTPEYDQLFSGDPVWVTESIGGMNNEGNSWVTKNAFRYLNTLYNLGTAPEPNLT ILWSEKLPENWKRFCSKVSIDTSSLQYENDDIMRPQFGEDYGIACCVSPMAIGKQMQFFG ARANLPKALLYAINGGKDELKKEQVTPVGEFEKITSEYLDFDEVWEKYDKMLTWLASTYV KALNIIHYMHDKYSYEALEMALHSLDIKRTEACGIAGLSIVADSLAAIKYGKVRVIRDED GDAVDYVVEQPYVPFGNNDDRTDELAVKVVRTFMNKIRSHKMYRDAEPTQSVLTITSNVV YGKKTGNTPDGRRAGAPFGPGANPMHGRDTKGAVASLASVAKLPFEDANDGISYTFAITP ETLGKTDDEKKNNLVGLLDGYFKQTGHHLNVNVFGRELLEDAMEHPENYPQLTIRVSGYA VNFIKLTKEQQLDVINRTISSKM >gi|292606587|gb|ADGG01000023.1| GENE 74 76177 - 76908 685 243 aa, chain + ## HITS:1 COG:FN0261 KEGG:ns NR:ns ## COG: FN0261 COG1180 # Protein_GI_number: 19703606 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Fusobacterium nucleatum # 1 243 1 243 243 461 90.0 1e-130 MQGYINSFESFGTKDGPGIRFVVFMQGCPLRCLYCHNVDTWELKDKNYIYTPNEILAELN KVKAFLTGGITASGGEPLMQASFILELFKLCKENGIHTALDTSGYIFNDQAKKVLEYTDL VLLDIKHIDKDMYKKITSVDLEPTLKFIQYLQEINKPVWLRYVLLPGYTDDIKDLNDWAK YVSQFDVVKRVDILPFHQMAIYKWEKTNREYKLKDVSTPTKEQIQKAEEIFKKYDLPLYK ERS >gi|292606587|gb|ADGG01000023.1| GENE 75 77162 - 78448 1857 428 aa, chain + ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 8 425 1 418 422 419 49.0 1e-117 MSIDLKNLEIETQLVQSLEEFEEGESRTVPLVQSTTFNYTNPDTLAELFDLKKLGYFYSR LSNPTVAAFENKIAILEKGVGALAFASGQAAITAAILTICKAGDHIVAVSTLYGGTITLL ASTLKNYGIETTFVNPEASEEEFKAAFRENTKILYGETLGNPEMNTLDFEKIVKVAKEKD VPTIVDNTLASPYLCNPISYGVNIVVHSATKYIDGQGSVLGGVIVDGGNYNWDNGKFPML VEPDASYHNMSYYKTFGNLAYIIKARANILRDMGAALSPFNAFILLRGLETLHLRMERHS ENALALATALEKNPNITWVKYSKLPSHYSYKNAEKYLTKGGSGVILVGVKGGREGAEKFI KGLGWIRAVVHVGDSRTCLLHPASTTHRQLSEEDLIKCGVLPEAVRINVGIENINDIIAD IEQALAKI >gi|292606587|gb|ADGG01000023.1| GENE 76 78673 - 79851 585 392 aa, chain - ## HITS:1 COG:FN0223 KEGG:ns NR:ns ## COG: FN0223 COG0658 # Protein_GI_number: 19703568 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Fusobacterium nucleatum # 15 386 1 372 378 439 74.0 1e-123 MKKLFLLTFLVIILMLRIATGVRITEIFPKEVYRMDFNLVDGKIKDLKINNKYPLKNIYG KLGYKENGKYEGYFLVNSIKEYKNIYFLELEDIKSEKIENNFLENYLQVLFDRAEEGYLY ETKNLNRAILLGDNSRIKKSLQEKIRYIGLSHVFAMSGLHIGLVIAIFYLILKKIIKNKI VLEVSLILLLSLYYFSIKESPSFTRAYIMALVYLLGKLFYEKINLPKSLIISAYLSILIK PTVVFSLSFQLSYGAMVVIIYIFPYIRKINYKKIKFLDYFLFTTTIQVFLIPITVYYFNT IQFLSLISNLVVLPLASFYITINYIALFLENFYLSFLLKPIIKISYNFLIYLIDFFSNFS YLSIEYENQKLIYIYSLVIILILIHKKSLLKK >gi|292606587|gb|ADGG01000023.1| GENE 77 79864 - 81051 1417 395 aa, chain - ## HITS:1 COG:no KEGG:FN0749 NR:ns ## KEGG: FN0749 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 391 28 405 405 379 61.0 1e-103 MVTTEADAKPQKVILDVKSVYDSLNIKGKIDYSIFQKAYLGYVQIPNKNPGVLVIIDYTK PSNEERFYVLDLNMKKLVYSTRVAHSKNSGLEIPLEFSDDPNSYQSSLGFFLTLGEYNGA YGYSLRLKGLEENINANAESRAIVIHGGDIVDDEYIKKFGFAGRSLGCPVLPTALTKEIV NYIKHGRVLFIYGNDEEYIEESLYLSKLAPVFEGKPQNIVELEKPRETTKVVTTASSSTT LTSTSVVSTSVASNPDQKNISIMLDVIKKEAEYKQHLSFRKSEKFIDYLAIIKNVIIDKT NSTVVKQSEKSSILLDSDKINEKKETEKTIEKVENNSQIIEEIKKEDTKQEEIKIEEIKK EEPKKEEVKKVNRKYSEEVIRKSLGLGVKLKSKIK >gi|292606587|gb|ADGG01000023.1| GENE 78 81141 - 81881 689 246 aa, chain - ## HITS:1 COG:no KEGG:FN0750 NR:ns ## KEGG: FN0750 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 239 1 242 243 218 58.0 2e-55 MKKWILLILAIILFGIFSIIRSCQRSSREVVNVYTDKEIEYFIGKFAKKFERNESKIQVK INNLKNISDYDIIITDEKESVTNLKKDFKSKDLFKDELVVIGRRRIENISQVVNSTIAMP NYKTNIGKTGLDILAKLDNFSEISKKIEYKDDAISSLESVDLYEVDYAFIPRKSLAFAKN SEICYRFPSTMEGNKILYRIYIDNNSSDNSKNFYNFLEEEFTEKIQEKPKSEKNKGVITK DVEGKS >gi|292606587|gb|ADGG01000023.1| GENE 79 81895 - 82905 1046 336 aa, chain - ## HITS:1 COG:FN0751 KEGG:ns NR:ns ## COG: FN0751 COG0252 # Protein_GI_number: 19704086 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Fusobacterium nucleatum # 1 336 1 336 336 605 92.0 1e-173 MENKVLIINTGGTIGMVGKPLRPAYNWSEITKGYSVLEKFPTDYYQFEKLIDSSDVTTDF WIRLAEVIEENYDKYLGFVILHGTDTMAYTGSMLSFLLKNLAKPVVLTGAQAPMVNPRSD GLQNLINSIYIAGHELFDIPLIPEVTICFRDSLMRANRSKKTDSNNYYGFSSPNYQPLAE IATEIKVIKDRILKLPTEKFYVEKNIDANVLLLELFPGLNPSYISSFIESNKNIKALILK TYGSGNTPTSEDFINTLKIIVEKGIPILDITQCISGSVRMPLYESTDKLSKLGIINGSDI TSEAGLTKMMYLLGKKLTLKEIKEAFSISICGEQTV >gi|292606587|gb|ADGG01000023.1| GENE 80 82895 - 83872 1146 325 aa, chain - ## HITS:1 COG:FN0752 KEGG:ns NR:ns ## COG: FN0752 COG0596 # Protein_GI_number: 19704087 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Fusobacterium nucleatum # 1 313 1 313 319 571 87.0 1e-163 MGNYDFYPAIEPFKSYMLPVSDIHSIYVEECGNPNGEPIIFLHGGPGAGCGKKARRFFDP EYYHIILFDQRGCGRSLPFVELKENNIFYSVEDMEKIRLHIGIDKWTIFAGSYGSTLGLT YAIHHPERVKRMLLQGIFLANESDVKWYFQEGISEIYPAEFKVFKDFIPKEEQDDLLKAY HKRFFSDDIKLRNEAIKIWSRFELRTMESEYTWSLEEDIQNFEISLALIEAHYFYNKMFW EDRDYILNRVDKIKDIPIQIAHGRLDFNTRVSSAYKLSEKLNNCELVIVESVGHSPFTEK MAKVLIKFLEDNKNSNYERMRKNGK >gi|292606587|gb|ADGG01000023.1| GENE 81 83915 - 84799 1192 294 aa, chain - ## HITS:1 COG:FN0753 KEGG:ns NR:ns ## COG: FN0753 COG0064 # Protein_GI_number: 19704088 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Fusobacterium nucleatum # 1 293 188 480 481 466 89.0 1e-131 METGSLRCDANISVMEKGSKVFGTRVEVKNLNSFKAVARAIDYEIARQIELIENGGKVDQ ETRLWDEENQITRVMRSKEEAMDYRYFNEPDLLKLLITDEEIEEIKKDMPETRLAKVERF KNAYSIDEKDALILTEEMELSDYFEEVVRVSNNPKLSSNWILTEVLRVLKHQNIDIEKFA ISSENLAKIITLIDKNIISSKIAKELFEIALTDNRDPEIIVKEKGMVQVSDSSEIEKMVE EVLTNNQKMIEDYKTADEGRKPRVLKGIVGQVMKLSKGKANPEIVNELIMSKLN >gi|292606587|gb|ADGG01000023.1| GENE 82 84829 - 85359 764 176 aa, chain - ## HITS:1 COG:FN0753 KEGG:ns NR:ns ## COG: FN0753 COG0064 # Protein_GI_number: 19704088 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Fusobacterium nucleatum # 1 175 1 175 481 343 94.0 1e-94 MIKEWESVIGLEVHLQLKTGTKVWCGCKSDYDETGINTHVCPICLGHPGALPKLNKKVVD YAVKAALALNCQINNESAFDRKNYFYPDAPKNYQITQFEKSYAEKGYIEFKLNSGREVKI GITKVQIEEDTAKAIHGKNESYLNFNRASIPLIEIISDPDMRNSEEAYEYLNTLKI >gi|292606587|gb|ADGG01000023.1| GENE 83 85375 - 86829 440 484 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 20 483 21 463 468 174 31 3e-42 MFIYELTAKELRDKFLSGEISAEEIVNSFYERIEKIEDKVKSFVSLRKELALEEAKKLDE KRKNGEKLGKLAGIPLAIKDNILMEGQKSTSCSKILENYVGIYDATVVKKLKEEDAIILG VTNMDEFAMGSTTKTSYHHKTANPWDLDRVPGGSSGGAAASVAAQEVPISLGSDTGGSVR QPASFCGVVGLKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGADDYDATV SKNEVPDYTEFLNKDIKGLKVGLPKEYFIEGLNPEIKKIVDNSVNALKELGAEIVEVSLP HTKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRTEGFGAEVKRRIM MGTYVLSAGFFDAYFKKAQKVRTLIKQDFENVLADVDVILTPVAPSVAFKLSDVKTPIEL YLEDIFTISANLAGIPAISLPGGLLDNLPVGVQFMGRPFDEGTLIKVSSALENKIGRLNL PKLD >gi|292606587|gb|ADGG01000023.1| GENE 84 86838 - 87128 343 96 aa, chain - ## HITS:1 COG:FN0755 KEGG:ns NR:ns ## COG: FN0755 COG0721 # Protein_GI_number: 19704090 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Fusobacterium nucleatum # 1 96 1 96 96 117 82.0 4e-27 MSLTKEEVLKIAKLSKLSFEEAEIEKFQLELNDILKYIDMLNEVDTSEIQPLVHINDVVN NFREREEKASIDIEKVLLNAPESAENAIVVPKVVGE >gi|292606587|gb|ADGG01000023.1| GENE 85 87138 - 87842 683 234 aa, chain - ## HITS:1 COG:FN0756 KEGG:ns NR:ns ## COG: FN0756 COG1187 # Protein_GI_number: 19704091 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Fusobacterium nucleatum # 1 234 1 234 234 359 87.0 2e-99 MRINKFLSSLGIASRRAIDKYIEEGRIKVNGAIPSIGIDVNEDDEIYIDNKKIETKRIEE KVYFILNKPLEVLSASSDDRGRRTVVDLIKTDKRIFPIGRLDYMTSGLILLTNDGELFNR LVHPKSEIYKKYYIKVFGEVKKEEIEELKKGVLLEDGKTLPAKVSGIKYDKNKTSMYISI REGRNRQIRRMIEKFGYKVLMLRREKIGELSLGDLKEGKYRELTKEEIEYLYSV >gi|292606587|gb|ADGG01000023.1| GENE 86 87832 - 88377 672 181 aa, chain - ## HITS:1 COG:FN0757 KEGG:ns NR:ns ## COG: FN0757 COG1386 # Protein_GI_number: 19704092 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Fusobacterium nucleatum # 1 181 1 181 181 281 87.0 3e-76 MSIKNQVEAIIFLGGDENKIKDLARFFKISLEDMLKIILELKDDRKDSGINIEVDAELVY LATNPIYGEVINSYFEQETKPKKLSSASIETLSIIAYKQPITKSEIESIRGVSVDRIISN LEERRFVRNCGRQESGRKANLYEVTEKFLSYLGIKNISELPDYDLFKDKIKDMENISTDE N >gi|292606587|gb|ADGG01000023.1| GENE 87 88393 - 89439 1264 348 aa, chain - ## HITS:1 COG:FN0758 KEGG:ns NR:ns ## COG: FN0758 COG1077 # Protein_GI_number: 19704093 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Fusobacterium nucleatum # 1 348 6 353 353 588 89.0 1e-168 MKKFMGNILGVFSDDLGIDLGTSNTLIYMKNKGIILREPSVVTISSKTKELFEVGEKAKH MIGRTPNIYETIRPLRNGVIADYEVTEKMLRCFYKRIKSGTFLNKPRVIICVPAGITQVE KRAVIEVTREAGAREAYLIEEPMASAIGVGINIFEPEGSMIVDIGGGTSELAVVSLGGVV KKSSFRVAGDRFDMAIVDYVRQKHNLLIGEKSAEDIKIQIGTVDPEAEELQIDVSGKYVL NGLPKDITLTSSELVETLSALVQEIIEEIRVIFEKTPPELAADIKKKGIYISGGGALLRG IDKKISSGLNLKVTVAEDPLNAVINGIGVLLNDFSTYSRVLVSTETEY >gi|292606587|gb|ADGG01000023.1| GENE 88 89455 - 90033 811 192 aa, chain - ## HITS:1 COG:FN0759 KEGG:ns NR:ns ## COG: FN0759 COG0424 # Protein_GI_number: 19704094 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Fusobacterium nucleatum # 1 192 1 192 192 281 79.0 5e-76 MILASKSERRQEILRDMGFNFKVITADIEEASDKKEISEMILDIAEKKLDKIAKENINDF VLAADTVVELEGKIFGKPKNREEAITFLKILSGKTHKVITAYVLKNISKNVVIKDVVVSK VKFFDLDDETINWYLDTNEPFDKAGAYGIQGQGRALVEKIEGDYFAIMGFPISNFLKNLR KNGYNISQIDRI >gi|292606587|gb|ADGG01000023.1| GENE 89 90035 - 90697 613 220 aa, chain - ## HITS:1 COG:no KEGG:FN0760 NR:ns ## KEGG: FN0760 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 220 40 269 270 155 45.0 9e-37 MGLMLIPTLLFFVLYGFVFMIENKKRRLFWELRLYYLYAISFVVVYIFILSNLGINLTSA LTFEIDADFIRNLINNSLFEYKIGYLPTYLLYEFVNLSLRFKQIPFHYFYYGLYGVGFFL FLLIIFGPLIRSMNRAKEKKRKERERIKAESKIREQIEIKKKLEKGEKVSTIKAENRVEK KNSSSLKKMRKVQTGVGTRVGEEMEKSGMVLQKTVTLEDE >gi|292606587|gb|ADGG01000023.1| GENE 90 90987 - 91559 620 190 aa, chain - ## HITS:1 COG:FN1004 KEGG:ns NR:ns ## COG: FN1004 COG1309 # Protein_GI_number: 19704339 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 188 1 188 188 251 70.0 8e-67 MPKKVLFSKEIILDTAFKLFKEEGYDAISARNVAKALDSSPAPIYKSIGSMEVLKAELVT RTKKLFIEYLLKERTGIKLFDIGMGICVFAREEKQLFLQIFSRHNVKSPLIDEFLNVIHE ELRTDERIISIDKEKQEELLHNCWIFAHGLSTLIAIDFFKDSSDEFIERSLKNGPARLFY EYLSKYSKKQ >gi|292606587|gb|ADGG01000023.1| GENE 91 91579 - 93030 2065 483 aa, chain - ## HITS:1 COG:FN1003 KEGG:ns NR:ns ## COG: FN1003 COG2067 # Protein_GI_number: 19704338 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Fusobacterium nucleatum # 211 483 1 273 273 414 80.0 1e-115 MKKLLFFIGILSSGLYGASIDHIQTYSPDYLANQSQTGMVDEVSSYYNPAGLSRLEKGKY IHLGLQFARGHEKMSYEGKEHKAILNQLIPNVSLTSVDDNGAYFFTFGGIAGGGKLKYDG VSGIDVLSDLDQFKPLGVYDKGSSLTGKNLYEQATLGRAFTINDQLSVSIAGRIVHGSRN LKGSLNIGANPTTAYKQAKARQVAQEVSKAVDAATQGSGLSATQIAAIKQQKTTEALTVL QTKMNGLQKAGLSGDLDSKREAWGYGFQLGVNYKVNDKLNLAARYDSRIKMNFKAKGSEN QLQTTDIIGSNIGLSTFYPQYTINSKIRRDLPAILSVGASYKVTDNYLVSTSVNYYFNRH AKMDRVTTFGGHKHGTDYKNGWEVALGNEYKLNDKFTLIGSLNYARTGAKNSSFNDTEYA LNSVTLGAGLRYKYDETLSFTGSVAHFIYEKEDGNFKEKYKVNENQKYHKEITAFGLSVT KKF >gi|292606587|gb|ADGG01000023.1| GENE 92 93187 - 93735 555 182 aa, chain + ## HITS:1 COG:no KEGG:FN0691 NR:ns ## KEGG: FN0691 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 182 4 181 181 137 49.0 1e-31 MYKLFLIFFIILNFSLFSSENYHVKEVLPIESIHNEIIEIEEDISVKKNTLSDEEKELFE KGKKEYTLEELRASNLISTNKDLKENKKDEYNNDVKFEEISERTSRIMALGSAMGAVDLG KIEERKFRIGAGVGSSGNNQAVAVGVGYAPTDRFRVNTKFSTSSTSKKGSAISIGASVDL DW >gi|292606587|gb|ADGG01000023.1| GENE 93 93776 - 94291 790 171 aa, chain - ## HITS:1 COG:no KEGG:FN0612 NR:ns ## KEGG: FN0612 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 171 1 166 166 184 61.0 9e-46 MKKILLISLLCLAVIACGKKEEVKEEVAEVSTNQTQDYGVPNPFEIVDTLDEAAKIAGFS LEAPTEYADYNSLVIQAIADDMIEVIYFDAEKTHEGLRIRKANGTDDISGDYNEYKEEIV VKLGELEITEKGNDGNISVATWTDGTYSYSINVDEALLNADDIAKLVETIK >gi|292606587|gb|ADGG01000023.1| GENE 94 94306 - 96219 2624 637 aa, chain - ## HITS:1 COG:FN0611 KEGG:ns NR:ns ## COG: FN0611 COG0441 # Protein_GI_number: 19703946 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 18 637 1 620 620 1217 96.0 0 MLVKYNGENKEYDSNINMFEIAKGISNSLAKKSVGAKVDGKNVDMSYVLDHDAEVEFIDI DSPEGEDIVRHSTAHLMAQAVLRLYPETKVTIGPVIENGFYYDFDPVEQFTEEDLEKIEA EMKRIVKENIKLEKYVLPRDEAIDYFRDVDKNKYKVEIVEGIPQGEQVSFYKQGDFTDLC RGTHVPSTGYLKAFKLRTVAGAYWRGNSKNKMLQRIYGYSFSNEDRLKKHLKFMEEAEKR DHRKLGKELELFFISEYGPGFPFFLPKGMVFRNVLIDLWRKEHEKAGYLQLETPIMLNKE LWEISGHWFNYRENMYTSEIDELEFAIKPMNCPGGVLSFKHQLHSYKDLPARLAELGKVH RHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIELST KPEKAIGSQEIWDMAESALAGALDKLGRKYKINPGDGAFYGPKLDFKIKDAIGRMWQCGT IQLDFNLPERFDVTYIGEDGEKHRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQV KVLTLNDECIPYAKEIMAKLQELGIRAELDDRNETIGYKIREANGRYKIPMQLIIGKNEV ENKEVNIRRFGSKDQFPKSLDDFYEYVVDEAAIKFDK >gi|292606587|gb|ADGG01000023.1| GENE 95 96388 - 99891 4189 1167 aa, chain - ## HITS:1 COG:no KEGG:FN0610 NR:ns ## KEGG: FN0610 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 14 1167 1 1155 1155 1707 79.0 0 MRRKFMFLFILSAMIVNNAYSETITADSDEVVIDLNDNTLTSDHGVAVTNGNMKGLFYKF RRNPETGEISFEDNAIMNIAQPTGNIKIETEGGKISQANEEGEFYNSFAYVNVAKMTGAE APNDKIYFGSPLIKYSDEKINAKDAWVTTDFNIVNFQKEPEKAGYHIFSSDVLIEPDKQI TLKKSDLFIKGTDVMPFNFPWFRANIRSGSKVPLFITIQSSDDYGAATSMGFLYGNRKDK FRGGFAPKFADKMGILVGRWENWYKFDKIGETRLNIDDWLIYAKNKEKPTASNELPEYEK RRKRYKVELSHDYEGDNGNFHFLSVNSTRSMVGSLADVMEKFDDNNVYNSLGLDRYKFDK NIGFYTLDSNLYNLGEKKDLSFTGKMSLVSDKKTYGLLVYDKIDDISYGSSIDHDLYTNL SLTKDNEKYKFNTRYDYLYDMDPGSTRKDTMSRNERIGADLLLKENGASISYDKRRGDDY RTFSFWEEDISTSAKKRNILGIDFSYTPTTVAKYKFNNFENIKASLGNYKMGRYTFTPTF AYNFLDRRLDEARDTYRKTVMGDNRLAEFNRFENTIYENTLERRADLNLYNDNEIYRVGL GKYNSEIWSRDGLFNATYRRYENKSKFYEIELGRKNIELVDKGTLGINATFRQDEFDGSS DKTSLLNLKLDNELFLYKGTDLDVTNKFRIEGQKYSFSGNKNNEEGRLINKSDFIKVDDS LVFDGKSTVTTYNIGYKTSKNPYGDKSKNGEQVNTGLNIKFDEDTSLDFKYVDDKRFTTR TRSEKKVNDLTTRQYSVKFETKKYDLGFTNTDIDFIGDDFYTINNFKEDINEHRVTAGYK FYNSKLSLSYAQGTDKLRVDGGGYLDRKNRMYSLVYNIYGDVEQDFAASYKTYRYGNNRI EDDIRNTDKYSFSYAYRDKRFEKEELMKYATLEYEKPESEITANDIDQIRAILDRKSDFY NQFELTRIKDETFRIGNYKKALRLYANIEKNNKRYSQTGNLRNSMSQFTGGLTYTYNRLG IGYKFTEKASWKRSAGNYYWSKNSKEHEFSLYAKVGKPSQGWKVKTYAMFYENKNDPTGK LYRKKSLDSIGIEIGKEMGFYEWAVSYENRYKSSSKDYEWRVGVHFTLLTFPNNSLLGVG AKNRGGNASTRPDGYLLDRPSQLKNSY >gi|292606587|gb|ADGG01000023.1| GENE 96 99961 - 100407 620 148 aa, chain - ## HITS:1 COG:FN0609 KEGG:ns NR:ns ## COG: FN0609 COG0691 # Protein_GI_number: 19703944 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Fusobacterium nucleatum # 1 148 1 148 148 231 95.0 3e-61 MIIANNKKAFFDYFIEEKYEAGIELKGSEVKSIKAGKVSIKESFVRIINDEIFIMGMSVV PWEYGSIYNPEERRVRKLLLHRKEIKKIHEKVKIKGYTIVPLDVHLSKGYVKVQIAIAKG KKTYDKRESIAKKDQERNLKRDIKINNR >gi|292606587|gb|ADGG01000023.1| GENE 97 100421 - 102538 1220 705 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 696 1 697 730 474 38 1e-133 MNLEKDLEKIKEILKTVKYLSFDQITSLLEWSPKKRKDNKAIILSWVDAGELLLDKKNRI TAIEDSSLYAKGIFRIIKNKFGFVDNENSEERNGIYIARENFNSALDGDRVLVKITSEGY DSKGKPGAEGEIIKIIERRKNTVVGILEKNKNFSFVLPTSAFGSDIYIPNSQVGNADNKD IVVAEITFWGDENRKPEGKIIKILGSSTNSKNMIEALIYREGLSDHFSDEAMQEVREVIK RKIDYTDRKDLTELPIITIDGADAKDLDDAVYVEKLKNGNYRLIVAIADVSYYVKKDSTL DLEARNRGNSVYLVDRVLPMFPKEISNGICSLNEREDKATFACEMEIDLKGDVVNYEVYK SVIKSVHRMTYKDVNAILDGNEKLIDSYSDIHEMLKEMLELSKILRNKKYTRGSIDFELP ELKVVLDEENNKVEEVLLRERGEGEKIIEDFMIAANETVAERIYWLELASIYRTHEKPDR EKVFKLNEMLAKFGYKIPNFDNLHPKQFQEIIERSKNQETSMLVHKTILTSLKQARYTVD DIGHFGLASSHYTHFTSPIRRYADLMVHRVLFSSINNSIKQLKLSDLDEIAHHISKTERV AMKAEDESVRIKLVEYMKKYVGEELELMVTGFASRKVFFETSEHIECSWDVTISGNFYNF DEENYCMKDYYNGTVFSLGEKVKALVEKADLLTLEIAVVPLKDIF >gi|292606587|gb|ADGG01000023.1| GENE 98 102553 - 103140 760 195 aa, chain - ## HITS:1 COG:FN0607 KEGG:ns NR:ns ## COG: FN0607 COG1713 # Protein_GI_number: 19703942 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Fusobacterium nucleatum # 1 179 1 179 193 268 84.0 3e-72 MKYNFNQLKEIVKSKMSLKRFTHTLGVVEMAGKLADIYKADIEKCKLAALLHDICKEMDM EDIKNICKNNFLNELSEEDLENNEILHGFVGTYYVNKEFGIEDKEVLNAIKYHTIGSKDM TLVEKIIYIADAIEYGRNYPSVTEIREETFKNLNKGILMEIEHKEKYLESIGKKSHPNTS QLKENILTELSKTYL >gi|292606587|gb|ADGG01000023.1| GENE 99 103268 - 104032 933 254 aa, chain + ## HITS:1 COG:FN1060_2 KEGG:ns NR:ns ## COG: FN1060_2 COG4884 # Protein_GI_number: 19704395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 75 254 1 180 180 280 86.0 2e-75 MIQALHFKDEKSDKFWFIETLDYELMVNYGKTGATGKYEIKEFDTVEECEKEALKLINSK KKKGYQEFPEFDRDNHYYFDDEECGLHILTSHINFRKYFTDEFYYDCGDEEAPFGSDEGN DALYELQEAIQKKKKINFFDFPKVIIEKIWEMDYLSPDVEKTDEELKEEVKTKYNGLLGD QIILQSDQVILAVTFGQAKITGKIDSDLLELALKSLTRIDRLNRLIWNWDKEEATYYIET MRKDLIKFREDFQK >gi|292606587|gb|ADGG01000023.1| GENE 100 104266 - 105552 1585 428 aa, chain - ## HITS:1 COG:FN1059 KEGG:ns NR:ns ## COG: FN1059 COG1114 # Protein_GI_number: 19704394 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Fusobacterium nucleatum # 1 424 1 424 425 620 88.0 1e-177 MYKTKDVLLTGFALFAMLFGAGNLIFPPMLGYETNSSWIMTMLAFTITGVGFPFLGILSV SIAGNGIKNFANRVSPKFSIIFAIISILAIGPMLAIPRTGATAYEITFLYNGMDSPVYKY IYLVAYFGIVILFSLRANKVIDRVGKILTPVLLILLFLIIVKGIFFTNLTVKPDIYPHAF KRGFLEGYQTMDTIASIAYAGIILTAIKSGRTLTQKQEFSFLIKSGLVAITSLALIYGGF AFVGAKMHSVLDTQDKIELLVKTTSYLLGSYGNLVLAVCVAGACLTTAIGLVATVGEFFS SITSFKYEKIVIFTVLISFALSVLGVESIIRISVPILIFIYPVTISLILLNLFGKYIKND YVYKGVVFFTGIVGLIESLDSLGIENYYTKSVLEILPFSDYGLTWLFPGLIGYILCSLIF RKAEIKEK >gi|292606587|gb|ADGG01000023.1| GENE 101 105661 - 106395 544 244 aa, chain - ## HITS:1 COG:no KEGG:FN1058 NR:ns ## KEGG: FN1058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 38 241 38 245 255 145 51.0 1e-33 MDLMFTTFFIFILFIFLVCSVFIIRKRLIKKAMLLGIDEDLKKLAPKEFFLNILKREKFS KIINYVGFLFFLLFSIFIVFQGYQEYILFKEESDSSINLISFILDKFKIPIFIWFVVSAN LLLALLMKKRENKRIYEMLDNLENSKLLKSAQVDFMIPNKIVETGLLGNDIKFGSKFLFV IYPGYIIPYCWLDDVKIVENPSRYGSKSHYVNIILKTSSKSINITFAKKEICEKIRELLL KKIK >gi|292606587|gb|ADGG01000023.1| GENE 102 106624 - 107013 187 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254303100|ref|ZP_04970458.1| ## NR: gi|254303100|ref|ZP_04970458.1| hypothetical protein FNP_0739 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 127 1 127 193 183 86.0 3e-45 MTYDFRYSKLAPNSILGFLFILMFVLVGLVISIIILFYILNYKILVAKEGTFWGEHQKLV FISILCLPIIVPSLFSIIGSISYRHLIDDKSGVLDISNNYAILYYKGEEIRLEKNKFSIS SAEIHFFQC >gi|292606587|gb|ADGG01000023.1| GENE 103 107131 - 107505 408 124 aa, chain - ## HITS:1 COG:no KEGG:FN1054 NR:ns ## KEGG: FN1054 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 122 7 125 125 132 71.0 5e-30 MYTSMIFIMIIIIIIMLVVTISLLKRKNWECFYIENEILYLPSLFVKEIPLSNIRNIEFE TFRSRGSHSGIIRVYQKDAKVVKRYFQTSKLAFFVNEQMVLEEIEKITPILKKYYIPYTI NKRK >gi|292606587|gb|ADGG01000023.1| GENE 104 107524 - 108249 803 241 aa, chain - ## HITS:1 COG:no KEGG:FN1058 NR:ns ## KEGG: FN1058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 15 234 34 254 255 205 59.0 1e-51 MAYLFRERKVEKILFSEFDESEKDLEAREFFNRMLKIERSAKSFYYAEVIFLIINTFFIL FGGYKTYLKEVEFVKEYPRFTESPLSSTLIKFMIPIFLWAVVFFLIIFAMIMKKKENKRI TEMLDNLEKVKHLKFAKEDFLRSDRILATGVVSMSDIKLGDRYLFSVYPAYIIPYIYIQK MEVERFYRRGGSIYYLDITLKRTFQNIKIYFAKEDVAEKVKEFILEKNKNLNEKENTKWN I >gi|292606587|gb|ADGG01000023.1| GENE 105 108328 - 108744 576 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782486|ref|ZP_06747812.1| ## NR: gi|294782486|ref|ZP_06747812.1| hypothetical protein HMPREF0400_00459 [Fusobacterium sp. 1_1_41FAA] # 1 138 1 138 138 271 100.0 1e-71 MNIELAKELLSFHSCRNENIDDPRWENGFLGILRPFQGELNEKNFIEIMECLKVLVPEIQ KENIDKNIVSDIMNIIHFTRNWVSEGGMLTRNSKLTAEQTKYLLAWIDIIETCFIYLLED ASDIAFDDYTAYCSNEYF >gi|292606587|gb|ADGG01000023.1| GENE 106 108748 - 109215 430 155 aa, chain - ## HITS:1 COG:no KEGG:FN1053 NR:ns ## KEGG: FN1053 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 155 1 181 182 214 72.0 5e-55 MYSYLYDNKFLLWITIIFMFIGMITVTIILYLFFLSIVKRKKKGKLSEKHSPYDFESSQQ NVINKSFNFQKYLYSGDYVKVIKTFKDYDGFTHPIGEKWYFACQYFLESEYGDVLYISTD KINIDTIYLEDREDNLYAHPEEYFKILEQGRFKRD >gi|292606587|gb|ADGG01000023.1| GENE 107 109268 - 109735 405 155 aa, chain - ## HITS:1 COG:no KEGG:FN1052 NR:ns ## KEGG: FN1052 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 155 1 155 155 197 74.0 1e-49 MSKIILILPFVFLFIGVFTVIYIMYMTIFEKRRKKMKNKEMNKLRETLSPYEFESTQKNA VNKRFSFMEYLYSEDYIKVIKEFKDYYGFTHQEGEKFYFACAYFLPYEDGYTLYISKDKI NIKAIYLQDRPETQREICYNLKKYFEIIEQGRFKR >gi|292606587|gb|ADGG01000023.1| GENE 108 109761 - 110462 497 233 aa, chain - ## HITS:1 COG:no KEGG:FN1051 NR:ns ## KEGG: FN1051 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 231 11 237 239 134 42.0 3e-30 MPDFKSRKIALNIMLFVLLISLMIILFGDKLFEIERDFEIKNKIFCGFLAFFYLALLGDT YFTKRRKEVKEKIEVPNEFKVFAFKQNLHILLYTFALLFDIFLIISGKARSSGIVGIIFS IALLIFLPYFIYNMIKRRYYSLEVKSKNIKIFFKNEEIGSFEIKNISLVKFFGSGVFLKK RGFLQKRNAGYPIMKIYAYGTDAVEISLTLRDYWVLKNYFKRYRVNINDIYVE >gi|292606587|gb|ADGG01000023.1| GENE 109 110476 - 111192 364 238 aa, chain - ## HITS:1 COG:no KEGG:FN1051 NR:ns ## KEGG: FN1051 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 236 1 237 239 231 63.0 2e-59 MNKDLNNNISDFSRRKKALKIVLFLLVISLIILAIQLFYIDDLSYLQGNLTIINSFIAFI LLFLYITLTADMYVSIKRIKEREKVEVPNEFRVDAFKQTYFIVLDTVILIIFIFIFVLSI VFKIGIFGIIFSLLGIGIFSYFLSVMIKSRKYSLEVRNRNIKVLYKNQEIEFLEIKDIPF VAFFGSGKKKVKKGDYPIMEICNIKGEILRIPLSLRNYWLMKKYFLKYAVEISDTYEN >gi|292606587|gb|ADGG01000023.1| GENE 110 111206 - 111589 613 127 aa, chain - ## HITS:1 COG:FN1050 KEGG:ns NR:ns ## COG: FN1050 COG0346 # Protein_GI_number: 19704385 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Fusobacterium nucleatum # 1 127 1 127 127 232 96.0 1e-61 MYIEHIAMYVNDLEKTKEFFIKYLGAKSNNIYHNKKTDFKSYFLTFDSGCRLEIMTKPEL VDDIKDLKRTGFIHIAFSVGSKEKVDELTEILKIDGYEVISGPRTTGDGYYESCIVGIEG NQIEITV >gi|292606587|gb|ADGG01000023.1| GENE 111 111604 - 111930 513 108 aa, chain - ## HITS:1 COG:no KEGG:FN1049 NR:ns ## KEGG: FN1049 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 108 1 108 108 154 86.0 1e-36 MRAKEFAEMCYAEKEIQLKEYMNGNKSLVAKLKNDLALSTEQEKILYKLVDTVLTDTYLT LLYALDGTASLGNGRQENFKLYGEDGELVFDSGELEMATYEAFYENKK >gi|292606587|gb|ADGG01000023.1| GENE 112 111951 - 113015 830 354 aa, chain - ## HITS:1 COG:no KEGG:FN1048 NR:ns ## KEGG: FN1048 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 352 1 365 367 368 72.0 1e-100 MELLKEDEEYISFLLKQGKKVEAIAFIKNKTGMTLKEAKDYIDKKNIPISKEDEQYLSSL INENKELEAVVFLHKNKDMSLLEAKNYTDRLILMKNIETNKKRSRKFGYVYDEELNTFVP NLARQKKVLKIMLNIFLVLLVITLIQFIFLDRSSDIKMIIFKFSISGISVLIITLPLGSL SIHYIENKLKKLKNLELSNQFEVKAFISNFHLSLHVLLILIFIIIIPIFLLKIEYKDYKG IFYFFGLIAITVAGIYELLKMLKYKKYSLKIDSREITLLYDKNEIKSIKFEKINFIKFYA KKFKGGENDIPTIEIFDMEKNIFTELDIKISDYILLKMYFEKHKVLVKDEFKRL >gi|292606587|gb|ADGG01000023.1| GENE 113 113040 - 113720 576 226 aa, chain - ## HITS:1 COG:no KEGG:FN1047 NR:ns ## KEGG: FN1047 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 45 226 60 238 238 160 58.0 2e-38 MKLLEKDEEYISSLLKQGKKVEAIAFIKNKTGMSLIEAKDYIEKLILEKNIHLLEKRSQE IEKIELSDKFEIKSLRINSWWLFLYIIFFIILIFILFSLINILLKELTYKHIFYSIIFTG AIIFNYYNFLKELKSRKYLLTVSGKTIKIYYENNETEVITTDNISQVRFYIIDSGRGIGN KNPTLQIFDSEEKILVEMTIKPIDYHSLKKYFEKYNVRIDNQYKEF >gi|292606587|gb|ADGG01000023.1| GENE 114 113740 - 114492 701 250 aa, chain - ## HITS:1 COG:no KEGG:FN1047 NR:ns ## KEGG: FN1047 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 250 1 238 238 281 77.0 2e-74 MNEPKKWGYIYDEKLNMYVPNLPRQKKFAKVLLILALISFVALLIQIYFFDKSSYEKISF LTYTSVMVFLFLALYLVLKINIRMVEKRLEEVKELKLSKELEIKALKNRRFFAYMMLWIL LIVMFVFRPHMIKTKYIFYLIFAIPLSIYNFYILFKELKNNKHSLTIFEKTIKIYYENNE KEVITTDNISYVRFYAIVLGRGRDRNPTLQIFENKEKMLVEMTIKPIDYYSLKKYFEKYN VRIDNQYREF >gi|292606587|gb|ADGG01000023.1| GENE 115 114528 - 114905 152 125 aa, chain - ## HITS:1 COG:no KEGG:FN1047 NR:ns ## KEGG: FN1047 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 4 123 117 236 238 108 52.0 8e-23 MNKKKLSFDYLFKLVLVIGICAFIFYRSLRKFQNSKYSLYIKGNTVKIFYENNEKEIITA ENINYVSFFALRRGKRGRERKPTLQIFDLEERILAEMTIEVIDYFRLKRYLKKYNVEIVD NYEWS >gi|292606587|gb|ADGG01000023.1| GENE 116 114880 - 115281 331 133 aa, chain - ## HITS:1 COG:no KEGG:FN1047 NR:ns ## KEGG: FN1047 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 124 1 109 238 70 44.0 1e-11 MNENKKWGYIYDKKLEMYIPNLPRFKKFTSIIFILLILSIFSGIVLSFLDLSSYDKIKIF VYNRMLVFIFLILWIFLLINTHYTEKILQELNELEVPREFEIKALKRRIIPQIIMTVIIL ISMFAFEQKKAFI >gi|292606587|gb|ADGG01000023.1| GENE 117 115328 - 116014 424 228 aa, chain - ## HITS:1 COG:no KEGG:FN1046 NR:ns ## KEGG: FN1046 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 69 227 4 161 245 199 73.0 5e-50 MFFLGYLVFYSALSLLIDVSIFFSILSFVLGGTLYFNSNSPLQGIAICAFGLLILISSLC YHSKGKCARGSSFVNYNTSCNFLSISIATVIFSIPIWYIIVKTNIIEIKSSPLYIFIPSL LISWAILFKIVDRILIHNRETKEVVLEDYFTIHRSRRDLTHIYIFKFKNSSDLYSTGMLR QRIFIDKIGSKFSCTFGKGIFGTNYITSIKLIKDAGIDTSENQTSHSF >gi|292606587|gb|ADGG01000023.1| GENE 118 116014 - 117168 1308 384 aa, chain - ## HITS:1 COG:no KEGG:TDE0809 NR:ns ## KEGG: TDE0809 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 5 380 5 377 381 355 54.0 2e-96 MKLIFELTNERRKYLGLIPVEEHWELVKFDNGIYYYFEDDIIRKEIKVSKNYYHEAELNE KTAENRTMILPKTKRGKIKKFNYTATQSFSPFGTYFTFSTNGVIIANYTTQRTYYSEIFS EKEKISLDNLKKWLDKWMKETTEEDLEEIEEFKNAKRKHCKFNEGDFFAFKISRREWCFG RILLDVSKLRKDENFKKNKNYGLANLMGKPLIIKVYHKISDNKNIDLKELSKCLALPSQA IMDNIFYYGEAIILGNLPLKPEENDMFISVSESISGIDKNIAYLQYGLIYREIPLSDYEK LIKDLKIGPQTLRREGIGFGIYTDDLKECIEAKSNSPFWKKYKKHNIPDLKNPDHIELKR KIFKAFGLDADKTYEENLKMLEVK >gi|292606587|gb|ADGG01000023.1| GENE 119 117320 - 118405 1336 361 aa, chain - ## HITS:1 COG:no KEGG:Acfer_1552 NR:ns ## KEGG: Acfer_1552 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 45 339 10 313 506 145 30.0 2e-33 MEILKKLSLILILVVGATLFIRCNKKTNDISKEKENKQLETKDLSIFELIKTSIQNNGEL PEDFKLPPKDPNGVPWADGAMDGVFMYHTVGKEEDIEALKKIVFQISEGKFEEAQTNLDK LDFSMISRANSLLDWIIQEQKQINLNNLYEFATLQLTTTKNIEVVKFCLSVLTILNVETD KDTIEKVKVLALSDEFTLYCLIIFVKLEDSNEEIFEIAKKVKGWGRIHSIAFLEATNDEI KEWILEEGCHNNVFPAYTAYACAKEINLIEILNEDKISNKKFNDISYLMNALLDESAITG MSALEDRELLIERYLEKAKTLSSTEEDYEAIRLIKEYVEDNEEIDKKFIKICDEILKSDK K >gi|292606587|gb|ADGG01000023.1| GENE 120 118433 - 119173 803 246 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1563 NR:ns ## KEGG: Lebu_1563 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 246 1 251 251 275 56.0 1e-72 MNGEVAQIRDIVIYAKNALKTKSKISYKPDKYENKIEFLFTENFEAKDVSEWYEHCIEKG LEDIKLSMPIAVKDPSLLAFSNTSQAGLVCYFKDNLVTYFIPKWEPGDKGWNVIYKEYKW ENPPKEKVQFEDNTEDFKNTLSKIATLADKIDFQNFTNIFTEAYNMLDGKEVESYYHKKY FSLMPERNARLLCSAGISDVFGGMGSWNDSPSWYAYEKGLESEYKKLSSELLTQIRLALL YSVNEW >gi|292606587|gb|ADGG01000023.1| GENE 121 119186 - 120031 255 281 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 30 280 24 280 285 102 29 7e-21 MIKVGKRQKLVINNFSSVGAYLFAGTDDDKDNILLPNNELEGRDLKEGDEVEVLIYRDSE DRLIATFRKTEALVGTLAKLEVVDDNPRLGAFLDWGLNKDLMLPNSQKETKVEIGKKYLV GLYEDSKGRVSATMKIYKFLMPSNDIKKGDIVNATVYRVNDEIGTFVAVEDRYFGLIPKS ECFEEYSVGDELTLRVTRVREDKKLDLSPRKLLSDQIESDAELVLGKMRLLKEHFRFNDN SLAEDIKDYFGISKKAFKRAIGSLLKNGLIEKSGDYFILKK >gi|292606587|gb|ADGG01000023.1| GENE 122 120046 - 121638 1704 530 aa, chain - ## HITS:1 COG:no KEGG:Athe_2404 NR:ns ## KEGG: Athe_2404 # Name: not_defined # Def: hypothetical protein # Organism: A.thermophilum # Pathway: not_defined # 11 514 15 486 491 229 33.0 2e-58 MNFFGKTLEILKKTWNNAVTNESTLNFNLDMFAYSSRYYKQNYEKNKNRFKNALIENDEI ALANLLYTLDIRNGKGERALFKSYFSTLIEMNKDYAIQILPYISELGRWDYVFEGIGTEI EENVYELIRAYLMIDIKNYNDNKPVSLLAKWLPSIKTHNKKNYFAIKLAKKLNLTEKEYR KILSKLRDRLNIVEKHITNKEYEKIEYISVPSKAMVKYKNLFFVKDEVRFKEFIEELKAT KKSKYDNLFMNDFAKMYLDNLGKIGVNYLYGKSIKEAYKNSISDLVKDLSLKELEDRQIL LQRFRDEKNLINTMWKKQSKIEFDKNVLVIADTSGSMQGTPFETAISLAIYISQNNKSEE WRNRFIIFSSDCIEYSYNKNAEFTDIIDEIPLIVDNTDIDKVFTKILNDSLEKNLPQLDE VIIISDMEFDMVQDKRDMSNFKHWKSEFAKHNYELPKIIFWNVARNVESFPVTKLDYGTC LVSGYSKNILKSIIDIENFDPIDVMLKTLEEKKYFEMVRAIKENLNSREF >gi|292606587|gb|ADGG01000023.1| GENE 123 121997 - 122524 571 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782501|ref|ZP_06747827.1| ## NR: gi|294782501|ref|ZP_06747827.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 175 1 175 175 284 100.0 1e-75 MSIEDIIKNEDILDCWKEIQKSNSNKNISKGIFEYDIEEYHTFLLDEIVEASEYMNMSTD ILINEMLLFTKDNKSLVINFSNERLNKKIPFSSPLTYEELSGGYTEEELGIAYQDLEDET NAIIDIGTLVSYLIDLIFLFKESKNYIKYLIEKLCYSEIHAKEFIDYEKNIVKNL >gi|292606587|gb|ADGG01000023.1| GENE 124 122543 - 123721 1092 392 aa, chain - ## HITS:1 COG:FN1041 KEGG:ns NR:ns ## COG: FN1041 COG4552 # Protein_GI_number: 19704376 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Fusobacterium nucleatum # 1 392 1 391 391 519 80.0 1e-147 MKIRYAKKSEKEMAIKFWKDSFKDSEEQIKYYFDNIYNEKNYLVLEDNSKIVSSLHENDY IFNFNNESIKSKYIVGVSSDIAMRNKGYMSKLLISMLEISKKKSMPFVFLTPINPQIYRK FGFEYFSNIEYYNFSIEELVDFKLPNGDYSYIEINEENKKSYLDDLVKIYNFNMEDKFCY LERDNFYFDKILKEAISDEMKIFILYKNKVASAYIIFGLYEENIEIRECMALDGLSYKEI LALIYGYRDYYKNVSLASPNNSNLEFLFENQLSIEKIVKPFMMLRILDPLAIFKNLKLEN HNIYIYIEDKILKENTGLYYFLNKKFTFYALPVEKSIYHLRIDIADLVFLITGYFSIDDL VKMGKIDISNKETLRKLKRIFSKKNSYLYEFI >gi|292606587|gb|ADGG01000023.1| GENE 125 123733 - 124056 183 107 aa, chain - ## HITS:1 COG:FN1040 KEGG:ns NR:ns ## COG: FN1040 COG1687 # Protein_GI_number: 19704375 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Fusobacterium nucleatum # 1 105 1 105 107 131 74.0 2e-31 MNNNLYLFLAILSAGVGMVICRLLPFIIFANGKLPKLVKFYEKYLPYSLMAILFCYCFAS VKFSVYPHGFPETITLIVIILLHIWKKNVMLSLFLGTVVFLILSRIF >gi|292606587|gb|ADGG01000023.1| GENE 126 124049 - 124753 822 234 aa, chain - ## HITS:1 COG:FN1039 KEGG:ns NR:ns ## COG: FN1039 COG1296 # Protein_GI_number: 19704374 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Fusobacterium nucleatum # 1 232 18 249 250 285 69.0 6e-77 MEEFKFAFKRAILIAFPYLFIGITCGFLMKEAGFGAIWSLLSCLLVYGGTIQLLMVGLLK ANTPIISMGLISLIVNSRHMFYGLSFLQEFKKIRKESFLKFFYLAFSLTDEVYSIYAAIK IPERLNKTKTMLYINLLAQFTWTFGCVVGNLAFNFIKFDLKGIDFIITEFFCIVVISQLI GDKSYISSSVGIISSIIAFLIMGSNFIVLAICLSMLTLLILKKKLAVKEVDKHE >gi|292606587|gb|ADGG01000023.1| GENE 127 124821 - 125642 1111 273 aa, chain - ## HITS:1 COG:FN1143 KEGG:ns NR:ns ## COG: FN1143 COG0363 # Protein_GI_number: 19704478 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Fusobacterium nucleatum # 1 273 1 273 274 444 79.0 1e-125 MRFVVTDNKRVGDWAAVYVANKIKEFNPTAERKFVLGLPTGSTPLQMYKRLIEFNKAGII SFKNVVTFNMDEYLGLEATHDQSYHYYMYNNFFNHIDIEKENINILNGKAENYEEECKRY EEKILELGGIDLFLGGVGVDGHIAFNEPGSSFKSRTRKVQLTENTIIANSRFFDNDITKV PRFALTVGIETITSAKEVLIMVEGENKARALHKGIESGINHMWAISSLQLHENAIIVADE AACSELKVGTYRYYKDIESENCDVNKLLEKVQK >gi|292606587|gb|ADGG01000023.1| GENE 128 125645 - 126562 993 305 aa, chain - ## HITS:1 COG:FN1142 KEGG:ns NR:ns ## COG: FN1142 COG1242 # Protein_GI_number: 19704477 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 1 302 1 302 304 525 85.0 1e-149 MIRKIYMLNDFLKEKFNEKIYKVSLDGGFTCPNRDGKVSRGGCIFCSENGSGDFTATKLK SIHEQIEEQIDLVSKKYKGDKYIAYFQNFTNTYAEVSYLRKIYQEALSHEKIVGLAIATR PDCLGDDVLELLAELNKKTFLWVELGLQTVNDDVAKYFNRAYETEIYKEASEKLNRLNIK FVTHIIIGLPKEEEDDYLKTAIFAQNCGTWGIKLHLMYVVKNTPLEKLYLNGDLKVNTKE EYVEKVINVLENISSEIVIHRLTGDGDRETLVAPLWSIKKIDVLNSIHKELKRRNTYQGK LYYGG >gi|292606587|gb|ADGG01000023.1| GENE 129 126602 - 127519 1196 305 aa, chain - ## HITS:1 COG:no KEGG:FN0976 NR:ns ## KEGG: FN0976 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 305 1 305 305 434 75.0 1e-120 MSISFYVKNKKKFLGYEPVLNVEAALSLLDKELNIYGTDGIDINDLLLSPLSKYPCLLVG TEDESARGFELAYDNKNKVYAVRVFTPSSREDWLLALEYMKALAKKFETEIVNERGETYT INNIDKFDYEPDILYGIKVITENIKSGESSNYIIFGTTRPVSFDEKMIDEINNSDSPIDT FSRIVRDIQNLDAYSANQQFYQNREDGKIMGAYTITESVRTIIPYKPSVEFHNSDIVKND DIAYWNMAFVVINGDENDRNSYQPVGRIAYDDFIKKLPKEKYKFIDASYIMVEPLTKEEI SDFLK >gi|292606587|gb|ADGG01000023.1| GENE 130 127602 - 128909 1302 435 aa, chain - ## HITS:1 COG:FN0978 KEGG:ns NR:ns ## COG: FN0978 COG1757 # Protein_GI_number: 19704313 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 1 430 1 430 431 565 82.0 1e-161 MGSIVAILLFSLSLIFCLLLKYSVIYALIVGYIIFVTYGLIKGHDLKVLTKKSFEGVLTV KNILLVFILIGMITALWRASGTIAFIVYMGSKLISPSILILLTFLLCSILSFLIGTSLGT AATMGVICVSIGKAIGINPYYLGGAVLSGIYFGDRCSPMSTSALLITELTKTNLYTNIKL MFKTSIIPFVTTCLFYLFLGLKRSTSPVGIDATNIFKENYNLNIVVIVPAILIIILSLFK VNVKKTMLVSIVISFIIAMFFQKESVTSLVNYCVYGFHHSNEKLNLMMRGGGILSMLNVG LIVAISSSYSGIFKETKMLVLMKKYLKEFSEKTSNYFVIFLSSIISGAIACNQSLGTILT YELCEELEDKQNMAIILENTIVLLAGLIPWNIAMAVPLKTIDIGLMSGLFAFYLYFLPLW NLFLGIIKEKLSDKN >gi|292606587|gb|ADGG01000023.1| GENE 131 129087 - 129494 502 135 aa, chain + ## HITS:1 COG:no KEGG:FN0979 NR:ns ## KEGG: FN0979 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 14 135 1 122 122 200 83.0 2e-50 MFGLFGGKKKKEFMSDNTKAYLHIYCAKNIIVDEQKFSELEHIKGDDLEDVIKVSTDKHI VTANYDLPSNSVFNSRIKAKDISISCPLLEAGKHYVISIYEVTPEVAATEESTFMDYVHA EEIEKGYSICLYRKK >gi|292606587|gb|ADGG01000023.1| GENE 132 129507 - 129764 334 85 aa, chain + ## HITS:1 COG:no KEGG:FN0980 NR:ns ## KEGG: FN0980 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 84 1 84 85 89 67.0 5e-17 MRIRLSGAVGGVVLVVITGVILASIVDGILSFIEKYVVKEDESGKKFISLLKKINWGFFI LFIILDLIGVFPLFRTLLFAIFERF >gi|292606587|gb|ADGG01000023.1| GENE 133 129813 - 130019 196 68 aa, chain - ## HITS:1 COG:no KEGG:BAD_1365 NR:ns ## KEGG: BAD_1365 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 15 68 250 303 303 63 53.0 1e-09 MANKSNYYPRTLRLQSREVQMYAEADYSEGTTTYMWIMSKIQELAQSIVDEEKSRLAASI SDSPKHLN >gi|292606587|gb|ADGG01000023.1| GENE 134 130070 - 130360 358 96 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 91 286 376 405 117 58.0 5e-27 MVKNHKLARNIVDVSWSEFNRILSYKAKWYGRTIVRVDKFFASSQICNCCGYRNEEVKDL SVREWTCPVCGAVHNRDINAAKNILKEGLRLLKESA Prediction of potential genes in microbial genomes Time: Thu May 19 21:42:56 2011 Seq name: gi|292606586|gb|ADGG01000024.1| Fusobacterium sp. 1_1_41FAA cont1.24, whole genome shotgun sequence Length of sequence - 43899 bp Number of predicted genes - 44, with homology - 42 Number of transcription units - 18, operones - 12 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 269 - 1036 1137 ## EUBREC_2750 hypothetical protein 2 1 Op 2 . - CDS 1047 - 2150 1198 ## Vpar_1397 hypothetical protein - Prom 2175 - 2234 7.4 3 2 Tu 1 . + CDS 2568 - 3755 1806 ## COG0133 Tryptophan synthase beta chain + Term 3769 - 3801 -0.2 - Term 3753 - 3791 5.2 4 3 Tu 1 . - CDS 3834 - 6020 2675 ## Dred_0528 XRE family transcriptional regulator - Prom 6100 - 6159 14.9 - Term 6196 - 6248 5.2 5 4 Tu 1 . - CDS 6257 - 6652 296 ## Sdel_2190 GCN5-related N-acetyltransferase - Prom 6866 - 6925 13.9 - Term 6933 - 6978 2.3 6 5 Tu 1 . - CDS 7001 - 7618 807 ## COG3339 Uncharacterized conserved protein - Prom 7755 - 7814 7.8 - Term 7737 - 7780 1.0 7 6 Op 1 . - CDS 7936 - 8148 198 ## Lebu_0003 protein of unknown function DUF1703 8 6 Op 2 . - CDS 8190 - 9410 1437 ## Lebu_0003 protein of unknown function DUF1703 - Prom 9436 - 9495 8.7 - Term 9453 - 9493 4.5 9 7 Op 1 . - CDS 9501 - 9683 298 ## gi|294782518|ref|ZP_06747844.1| hypothetical protein HMPREF0400_00495 10 7 Op 2 . - CDS 9691 - 9849 112 ## - Prom 9892 - 9951 9.7 11 8 Op 1 1/0.000 - CDS 9990 - 11381 1698 ## COG1262 Uncharacterized conserved protein 12 8 Op 2 . - CDS 11429 - 12811 1572 ## COG1262 Uncharacterized conserved protein 13 8 Op 3 . - CDS 12891 - 13334 631 ## gi|237740388|ref|ZP_04570869.1| predicted protein 14 8 Op 4 . - CDS 13356 - 13877 539 ## gi|294782522|ref|ZP_06747848.1| DeoR family transcriptional regulator - Prom 14017 - 14076 13.7 15 9 Op 1 . - CDS 14238 - 15047 1068 ## SSUBM407_p004 toxin of epsilon-zeta postsegregational killing system 16 9 Op 2 . - CDS 15049 - 15288 380 ## gi|294782524|ref|ZP_06747850.1| hypothetical protein HMPREF0400_00501 - Prom 15370 - 15429 14.0 + Prom 15313 - 15372 12.3 17 10 Op 1 . + CDS 15407 - 15574 326 ## 18 10 Op 2 . + CDS 15630 - 15920 468 ## gi|294782526|ref|ZP_06747852.1| hypothetical protein HMPREF0400_00503 19 10 Op 3 . + CDS 15935 - 16228 430 ## gi|237740382|ref|ZP_04570863.1| predicted protein + Term 16248 - 16297 0.1 + Prom 16301 - 16360 9.9 20 11 Op 1 . + CDS 16454 - 17278 806 ## PsycPRwf_1121 hypothetical protein 21 11 Op 2 . + CDS 17313 - 18365 904 ## COG0827 Adenine-specific DNA methylase 22 11 Op 3 . + CDS 18385 - 19254 1125 ## gi|294782528|ref|ZP_06747854.1| hypothetical protein HMPREF0400_00506 + Term 19268 - 19317 8.6 - Term 19251 - 19310 4.9 23 12 Op 1 . - CDS 19328 - 20368 1601 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 24 12 Op 2 . - CDS 20365 - 20676 291 ## FN1158 hypothetical protein 25 12 Op 3 4/0.000 - CDS 20669 - 21193 799 ## COG0242 N-formylmethionyl-tRNA deformylase 26 12 Op 4 1/0.000 - CDS 21203 - 23518 2290 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 27 12 Op 5 1/0.000 - CDS 23519 - 25681 2327 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 28 12 Op 6 . - CDS 25665 - 26915 918 ## COG1295 Predicted membrane protein 29 12 Op 7 . - CDS 26931 - 27260 463 ## FN1153 hypothetical protein 30 12 Op 8 . - CDS 27285 - 28475 1695 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 28681 - 28740 12.2 + Prom 28475 - 28534 7.4 31 13 Tu 1 . + CDS 28728 - 30278 1541 ## Cphy_1523 hypothetical protein - Term 30255 - 30313 2.1 32 14 Op 1 . - CDS 30327 - 31742 1585 ## jhp0940 hypothetical protein 33 14 Op 2 . - CDS 31754 - 32080 533 ## gi|294782539|ref|ZP_06747865.1| DNA double-strand break repair Rad50 ATPase 34 14 Op 3 . - CDS 32095 - 32364 350 ## gi|294782540|ref|ZP_06747866.1| conserved hypothetical protein - Prom 32423 - 32482 10.0 - Term 32456 - 32507 7.2 35 15 Op 1 . - CDS 32594 - 33934 1132 ## COG0534 Na+-driven multidrug efflux pump - Prom 33981 - 34040 6.2 36 15 Op 2 . - CDS 34051 - 34464 600 ## COG2510 Predicted membrane protein - Prom 34489 - 34548 8.5 + Prom 34453 - 34512 14.5 37 16 Tu 1 . + CDS 34586 - 35788 997 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog + Prom 35807 - 35866 11.1 38 17 Op 1 25/0.000 + CDS 35898 - 36803 1356 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 39 17 Op 2 42/0.000 + CDS 36826 - 37512 263 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 40 17 Op 3 10/0.000 + CDS 37520 - 38437 920 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 41 17 Op 4 . + CDS 38434 - 39291 715 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 39339 - 39382 7.1 + Prom 39404 - 39463 11.8 42 18 Op 1 27/0.000 + CDS 39567 - 41063 2051 ## COG0286 Type I restriction-modification system methyltransferase subunit 43 18 Op 2 4/0.000 + CDS 41050 - 42165 820 ## COG0732 Restriction endonuclease S subunits 44 18 Op 3 . + CDS 42165 - 43325 1112 ## COG0732 Restriction endonuclease S subunits Predicted protein(s) >gi|292606586|gb|ADGG01000024.1| GENE 1 269 - 1036 1137 255 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2750 NR:ns ## KEGG: EUBREC_2750 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 255 1 258 307 335 65.0 1e-90 MSNIIAVIWDFDKTLVDGYMQDPIFEKYGVDSKKFWEEVNALPNKYWEEQEVKVNRDTIY LNHFINKTKEGVFKGLNNHVLFELGKELKFYKGIPEIFGKTKELIEKDSIFQEYNIKVEH YIVSTGMKRMIEGSIIKEYVEDIWGCELIQTKDENGNFEISEIGYTIDNTSKTRAIFEIN KGVNKNTGYDVNAKIKEGNRRVLFKNMIYIADGPSDVPAFSVIKKGGGSTFAIYPKSDLK AFKQVEKLREDNRVD >gi|292606586|gb|ADGG01000024.1| GENE 2 1047 - 2150 1198 367 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1397 NR:ns ## KEGG: Vpar_1397 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 366 1 328 332 151 30.0 3e-35 MSEVWRLHTKPKLSKKNKLEDKVTNELIRRKIVAIGWTLREDIYNELTNEDKIKVEENEK SIKDDFEKYKEIIEKNSYKTIKDDKRKFFYGKVNPNLIRLNNLKKDDLIWMRSKGIYYLG RVTEKSHYLYAYRDSKKDSDILKLGISNQFTDIEWHEIGTESEIPGRILIAFYQREALIE IDEKFVVDISQILYNKKDNYYKISDKLENNKTNFYGLLSPNDCEDLLYFYLYHKFKYIVI PSTNKINTQNYEFVMLNSNNRDKKIYIQVKNGYSKGSDLYLEDYQKLDGKVYLLTTAGNF YETKTKKKLLQIAFKQNYEFEEIGSTKNNNKIYAINPEALYEFAKEAYENESILMPHSIL QWFEYLK >gi|292606586|gb|ADGG01000024.1| GENE 3 2568 - 3755 1806 395 aa, chain + ## HITS:1 COG:FN0317 KEGG:ns NR:ns ## COG: FN0317 COG0133 # Protein_GI_number: 19703662 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Fusobacterium nucleatum # 1 395 1 395 395 726 94.0 0 MTTENKKGYFGEFGGSYVPEVVQKALDELEIAYNKYKGDDEFLKEYHHYLKDYSGRETPL YFAESLTNYLGGAKIYLKREDLNHLGAHKLNNVIGQILLAKRMGKKKVIAETGAGQHGVA TAAAAAKFGMQCDIYMGALDVERQRLNVFRMEMLGATVHAVEAGEKTLKEAVDGAFEAWI NNIEDTFYVLGSAVGPHPYPSMVKDFQKVISQEARRQILEKENRLPDMVIACVGGGSNAI GAFAEFIPDKNVKLVGVEAAGKGIDTDRHAATLTLGTVGVIDGMNTYALFNEDGSVKPVY SISPGLDYPGVGPEHAFLRDSKRAEYVPATDDEAVNALLLLTKKEGIIPAIESSHALAEV IKRAPKLDKNKIIIVNISGRGDKDVAAIAEYLKNK >gi|292606586|gb|ADGG01000024.1| GENE 4 3834 - 6020 2675 728 aa, chain - ## HITS:1 COG:no KEGG:Dred_0528 NR:ns ## KEGG: Dred_0528 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: D.reducens # Pathway: not_defined # 3 727 4 734 738 362 34.0 4e-98 MSEFNLKNFRENYLKLTQAELAELIGVRQDRISRLEQNLDSISLEELVILSKKTGKSLDE ITNYKKNVINKLEVKDSWSKVRYIKNTVINYIKDYSPKNNLNYENKIENLRRDIEGIARK PRIVFSGKSDSGKSTMINALLGKEKMPTNWTPTTSIIVYVKDILDRPAYMEEELWIFKKG KNKEWDDTRLYDEKYCREWKVAGGNAEMLSQYGVRKGEEYNKDIGSAVLFIDSPILKNCD ILDIPGITAGIESDNIAASQAKLKADVLVYLSQASGFLQTEDANYLKEALEVLPPLEKTE GTALSPMSNLFVVATHAHHVIPRTDLKKICDSGCNRFTKTLPESFWERYSNSSKKLFSEK DLRKRFFTYTTDIEDLREDFEKELKNTIENLPKLLENKIFNLAKDYAKNESKKMSDEVIK YEKLINERDAYSKRLEDIKKNEPKRKFLLEENNRNVKNKIFDLDSETKKKFREDFNQMLT EENIVKIIDRREYKNKKADLEELGSYISSEVQDIYRKNLEKTTEKFKDTMDEYLVETQKS LELANNSNNMNINLDFDFKSAFIGGLAGAATLGGLAFWASTLGNLGAYILVAKGVSVLSA LGISIAGGTATATAFVASIGGPITLGIAAALLVGVAIWGFFSDSWKKKIAKKIIEEIKKS VPKYEDAITQYWLDTENGFDIAKNKMEEEWEKYINNLENELYNYDINKLKENLRNAKEVK DFFTNIPL >gi|292606586|gb|ADGG01000024.1| GENE 5 6257 - 6652 296 131 aa, chain - ## HITS:1 COG:no KEGG:Sdel_2190 NR:ns ## KEGG: Sdel_2190 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: S.deleyianum # Pathway: not_defined # 4 130 50 180 180 136 51.0 3e-31 MQREEDINKSLETKGAIAYKAVMNDEIVGGTIVVIDELTQHNQLDFLYVKYGIQGKGIGK FIWSEIEKKHPNTKVWETVTSYFEKRNIHFYVNLCKFSIVEFFYPSHEEKNILNDMMGNG YLFRFEKVMKR >gi|292606586|gb|ADGG01000024.1| GENE 6 7001 - 7618 807 205 aa, chain - ## HITS:1 COG:mlr4351 KEGG:ns NR:ns ## COG: mlr4351 COG3339 # Protein_GI_number: 13473675 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 94 168 25 97 120 65 42.0 6e-11 MDKKYFECMTELGLEPGFNLSELRKKWLELLKKYHPDKYQTEDESVIKSAEEKIIKINEA YEYLKENFLEGQKEDIDTMDYDYEEYTDDYSENKFWDKFKEGAKKIGLKATSYALILYYV LQKKEVPFKDKVLITGCLGYFILPIDLIPDFIPVVGYSDDIAGMIFAIKKCMNYVDDEIK QNVSNKLVSWFDIEKDYVDDLLKDI >gi|292606586|gb|ADGG01000024.1| GENE 7 7936 - 8148 198 70 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 1 69 477 545 545 89 63.0 3e-17 MEPRNKNNRAYILEFKVTKNEEDLEKESKEAIEQIISKKYDTSLKERGIKEIVFLGIAFC SKLVKVNFKL >gi|292606586|gb|ADGG01000024.1| GENE 8 8190 - 9410 1437 406 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 403 3 405 545 486 66.0 1e-136 MKKIPIGIDDFKKIRENSYYYIDKTNFIEEIGKNVGKTLLFTRPRRFGKTLNISMLKYFF DIKNKEENKKLFQNLYIENSDFFKEQGAYPVVYISLKGIKADTWESSFFLIKSLISSIYN EFEYIREKLNESQLESFNKIWLKKDDGEYRNALKNLTSFLYEYYKKEVILLIDEYDSPLI NAYEHGYYDEAIVFFQVFYGEALKTNPYLRMGIMTGIIRVIKAGIFSDLNNLKVYSILEK EYSDFYGFTQEEVEKALKDFNIEYELPEVKAWYDGYRFGNSDVYNPWSILNFIQSEELRA YWIETSGNFLINDILKNVSIETIEILEHLFNGISMEENISGNSDLSVLMGEDEIWELLLF SGYLTIDEKIGESYEDIYTLRLPNREVKEFFRKKFIDINFGESTLL >gi|292606586|gb|ADGG01000024.1| GENE 9 9501 - 9683 298 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782518|ref|ZP_06747844.1| ## NR: gi|294782518|ref|ZP_06747844.1| hypothetical protein HMPREF0400_00495 [Fusobacterium sp. 1_1_41FAA] # 1 60 1 60 60 67 100.0 3e-10 MKTLKELFKDYDKNNKKTVRETFSEMDRKDIRTNREIFKDMENVGRSVKEIFEDMSEKKK >gi|292606586|gb|ADGG01000024.1| GENE 10 9691 - 9849 112 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFESLLYGAVGIFIIFCASILMLKSAGENCLGCVATILCIIFLIWLFRKCAT >gi|292606586|gb|ADGG01000024.1| GENE 11 9990 - 11381 1698 463 aa, chain - ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 196 429 34 254 286 144 38.0 3e-34 MKENISKFITEEKALLWIKTSNFQEVERVMIESLNSLENKKFYIYEKGKTINFLNGGIES GMDNLFNTLDELYPQGIKRVPIFLLVKDGIDEILRKENLDYFKEIVETKKETPKYNITII ITNKENVPPELEDMVEFIDKEIIDNEVAIKNYILDLAEFEKLEINEVKLDKIVKLLKKDI HKFSKNNNTLDENMANMIFVEGGEYKPPFADGKKEVLDLEVCKYPTTQKMWQEVMEYNPS QFKGDNKPVEMVSWWRALEFCNKLSEKYGLQPTYDLSNSSNGILMINQLNGKAVYPDEAD FGKTEGFRLPTEVEWEWFARGGQEGLDDGSFYFLYAGSDDLAEVGWYVHNSGAINRNGSS KEVGLKKPNKLGIYDCSGNVFEWCYDTVEFTKNAIYARVECENRLGNGKDYLYKHGNLDL ERRLKGGGWGQYGAYCFVRTRHHAYPHQHYSDLGFRIVRTVHL >gi|292606586|gb|ADGG01000024.1| GENE 12 11429 - 12811 1572 460 aa, chain - ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 191 422 25 254 286 128 35.0 3e-29 MKESISKFITEGKALLWIKTNDFQEVERAMIESLNSLENKKFYIYEKGKTINFLNDSIES GMDDLFNTLDELHPQGMRKIPVFLLIKGAMDEILKENNLDYFREILEIKKESTRYNFSIV VADNEDIPTQLANISDFIDKKITDNEGAIKKYILDLAKFEKLELDENDVEKIINTLKNNI NRYAEKNGRKNSESKFKDMVFVQGGKYQPSFADEEKEVFDIEVCKYLTTQKIWKEYRYSS NHNPSEFKGENRPVERISWSDALNFCNYLSEKYCLQPVYENRNGSIMVRQLSGKVVSLDL ADFKDTEGFRLPTELEWEWFARGGQKAIDEGTFNYKYSGSDDINEVAWYYDNSGNQTHDV GLKKPNQLGLYDCTGNVWEWCYDTTKYKNFEGESENRIEKDKLYVYNLNPLDRYQRIRGG GWSDSDWFEPDWSEPGYIDYRSCTNRAWTNYIGFRVVRTV >gi|292606586|gb|ADGG01000024.1| GENE 13 12891 - 13334 631 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237740388|ref|ZP_04570869.1| ## NR: gi|237740388|ref|ZP_04570869.1| predicted protein [Fusobacterium sp. 2_1_31] # 1 147 1 147 147 234 100.0 9e-61 MAFEKRVIDFREVMFKDNELFTGIYYEYHENGLDKYECSYRDGLKHGMEWMFDEYGMAIE VRTYKKGEMTTFEEYYPSGALKQKIELKDEMKNGIEMAFEENHNILYYGLNKDDKRYGEW QFYKNGKLEKYVSYKNGEIIGEEKVEY >gi|292606586|gb|ADGG01000024.1| GENE 14 13356 - 13877 539 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782522|ref|ZP_06747848.1| ## NR: gi|294782522|ref|ZP_06747848.1| DeoR family transcriptional regulator [Fusobacterium sp. 1_1_41FAA] # 1 173 1 173 173 287 100.0 2e-76 MLKKESEKVNIKALVPIYIREILDEDIKHFRIAKYTLCNQILIKFSCCSDNNFSKITPFE KKEYLQFAVQKENITRYSELRELNKDKTESEMIREIFASYTTMPPFLREINLFEEKIVFL ITAKKEYKKLKLHTDDGFIEGKIEDIRRNEENNYLEVIINSKSYYISRLTIIS >gi|292606586|gb|ADGG01000024.1| GENE 15 14238 - 15047 1068 269 aa, chain - ## HITS:1 COG:no KEGG:SSUBM407_p004 NR:ns ## KEGG: SSUBM407_p004 # Name: not_defined # Def: toxin of epsilon-zeta postsegregational killing system # Organism: S.suis_BM407 # Pathway: not_defined # 4 240 6 245 287 165 41.0 2e-39 MEKNYTDKELELVFEKILKMYKSSYSPKEKPKVFLLGGQPGAGKTGLENMINAKDEYISI SGDDFREYHPKFKEINLEHGREASKYTQQWCGAITEKLIEALGKEKYNLIIEGTLRTAEL PIKEATRFKKLGYEVGLNVVAVKGEKSRLGTIQRYEEMIKQGKTPRMTPKEHHDLVVNSI GDNLETIYNSKLFDEIRLFDRENNLLYSYKETPDVSPKDILEKEFCREWEKEEIEEYNER WNNLIKTMENRKASAEEISKVIIEKENNL >gi|292606586|gb|ADGG01000024.1| GENE 16 15049 - 15288 380 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782524|ref|ZP_06747850.1| ## NR: gi|294782524|ref|ZP_06747850.1| hypothetical protein HMPREF0400_00501 [Fusobacterium sp. 1_1_41FAA] # 1 79 1 79 79 126 100.0 4e-28 MKLYDLTLKKEVARECAWGVMGTITRIEYKKGESPVLSLIEKEFWEEVRKIPRMTFEEVE ALNVKINFIMKVLSKLEEI >gi|292606586|gb|ADGG01000024.1| GENE 17 15407 - 15574 326 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMSNINITVDEEIDDFTYFNAETIEAIEETERNLKNSNRKRYSSIQELREALEND >gi|292606586|gb|ADGG01000024.1| GENE 18 15630 - 15920 468 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782526|ref|ZP_06747852.1| ## NR: gi|294782526|ref|ZP_06747852.1| hypothetical protein HMPREF0400_00503 [Fusobacterium sp. 1_1_41FAA] # 1 96 1 96 96 155 100.0 6e-37 MGLFGKTRELPFESNGRLVEVINQNDAYLDEGIEEKKSYKALERQLERRFLYRNVESITP TGTFGIVIVKYKDLKVRSEEEVAEIRRQLRKEAGLE >gi|292606586|gb|ADGG01000024.1| GENE 19 15935 - 16228 430 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237740382|ref|ZP_04570863.1| ## NR: gi|237740382|ref|ZP_04570863.1| predicted protein [Fusobacterium sp. 2_1_31] # 1 97 1 97 97 155 100.0 6e-37 MKKILLALSVVFLLVACGKPKAYTLPEKEKESIFAIAENNQQKLDELHKNMEEWKKLAEK GDEQGKKEYQEWQIVETLVSDPSYVEVNYKALKADGK >gi|292606586|gb|ADGG01000024.1| GENE 20 16454 - 17278 806 274 aa, chain + ## HITS:1 COG:no KEGG:PsycPRwf_1121 NR:ns ## KEGG: PsycPRwf_1121 # Name: not_defined # Def: hypothetical protein # Organism: Psychrobacter_PRwf-1 # Pathway: not_defined # 1 274 46 322 325 293 57.0 3e-78 MPSVFNILLIDRTKTTKRCIKNIIWANENYIKYDAEKYSPTSEIRIELITGEYNNIIQPR ALKAADLQKKRTKAIAEVFTPIETLKEQIDEIDKNYQNDDLETYTKRTWIEITCGEGPYI ATRYNVVTGNFIYLDERVGFLDRKLKRINKECDIKDKWKELVNEAYKATYAFEWNGDSLL LARENLLYTYFDYYYDKWNSEPSLEDIEEIALIISYNIFQMDGLKCIIPLSDVEPQKNEQ LNLFNKIEKIVPNKKGQYVKIMNWKKNKMEFFKK >gi|292606586|gb|ADGG01000024.1| GENE 21 17313 - 18365 904 350 aa, chain + ## HITS:1 COG:MPN108 KEGG:ns NR:ns ## COG: MPN108 COG0827 # Protein_GI_number: 13507847 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Mycoplasma pneumoniae # 1 126 248 371 404 72 34.0 2e-12 MKFDAVIGNPPYQENDNGIREEGAAINASAKPLYNHFFYLAQEITSDKINLIFPARWLVG AGKGLTEFTKKMLNDKHIKSVTIFQKASDVFVNTDIKGGVLHLTYDKTYKGKTHIKVIDW KKRLHEYTAYLNSCGSGFLIPYEKLVSIYKKVRNLSEESIQKHISTRKPYGLATDFFKNP AKYSMPEIFEQKNNEEDLSIFGLEKNKRVIKYVPKDYPITTGNDTIYKWKFFVGKAMGNG EFGEIYPDYPIAAPGEIATETFIRIGAFDSKEEAEALKKYFYTKFFRALLGIAKVTQDAT SKVYCFVPNQNFGKNSDINWNEDIKKIDLQLYKKYKLNKTEIKFIEENIK >gi|292606586|gb|ADGG01000024.1| GENE 22 18385 - 19254 1125 289 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782528|ref|ZP_06747854.1| ## NR: gi|294782528|ref|ZP_06747854.1| hypothetical protein HMPREF0400_00506 [Fusobacterium sp. 1_1_41FAA] # 1 289 1 289 289 489 100.0 1e-136 MEFIRESSERSDSKNILKKAILKDSNFKLISFEGSPTRDNNVTILMDKFKVNKDLSTTNS DDRLKIFNELYKYSEFKDEFVLKRLTVEDKKLKWGILLYDDNEYSLFFIKNCEDRWAFCK EFKNAKEFSDWLYENYSTIRENISDYQENGLPEYDISMRENKKPWPGNVDGILFYNNTIV AVIEFQTTNKQSVKDHDNNDWWFPKYDKDGNEKRKGDKERWKSIYINSKSLNLSIIVGVW NKKEEEYCIKLIKDFNFETEKAPFIFWEKKEIANDENISTKLLEILDIK >gi|292606586|gb|ADGG01000024.1| GENE 23 19328 - 20368 1601 346 aa, chain - ## HITS:1 COG:FN1159 KEGG:ns NR:ns ## COG: FN1159 COG1494 # Protein_GI_number: 19704494 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Fusobacterium nucleatum # 1 346 1 346 346 618 98.0 1e-177 MKRELALEFARVTEAAALAAHKWVGRGKKESADQAGVDAMRTMLNRLAIDGEIVIGEGEI DEAPMLYIGEKVGLIYNEEEKDSATYVDPVDIAVDPVEGTRMTAQGQPNAITVLAVGKKG SFLKAPDMYMEKLIVGPEAKGKIDLSKPLEDNIHAVAKALNKELKDLMIVILDKPRHKEL IKDLQNMGVKVYALPDGDVAGSILTCMIDSDVDMLYGIGGAPEGVISAAVIRALGGDMQA RLKLRSEVKGTSLENDKISKFEKLRCEEQGLKVGEILKLEDLAKDDEIIFSATGITGGDL LEGVKRKGSIARTQTLVVRGLSKTVRYINSIHNLDFKDEKITHLVK >gi|292606586|gb|ADGG01000024.1| GENE 24 20365 - 20676 291 103 aa, chain - ## HITS:1 COG:no KEGG:FN1158 NR:ns ## KEGG: FN1158 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 18 90 18 90 104 73 67.0 2e-12 MSKRVGWLILIIGLCLVTLRVIVQINHNMSKKKSIQEEIKIINKKIEETEANIAKYDRKI ESLDDDFEKERVARNMFQMVRDNEVIYKYVEKDKHANNIKEER >gi|292606586|gb|ADGG01000024.1| GENE 25 20669 - 21193 799 174 aa, chain - ## HITS:1 COG:FN1157 KEGG:ns NR:ns ## COG: FN1157 COG0242 # Protein_GI_number: 19704492 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Fusobacterium nucleatum # 1 174 1 174 174 263 83.0 2e-70 MVFEIRKYGDDVLKQIAKEVELSEINDEFRKFLDDMVETMYETDGIGLAAPQVGVSKRVF VCEDGNRKIRKIINPVIEPLTEETQEFEEGCLSVPGIYKKVERPKKVKLNYLNENGETVE EIAEDLLAVVVQHENDHLNGILFVEKISPIAKRLIAKKLANMKKETKRIMEENE >gi|292606586|gb|ADGG01000024.1| GENE 26 21203 - 23518 2290 771 aa, chain - ## HITS:1 COG:FN1156 KEGG:ns NR:ns ## COG: FN1156 COG1198 # Protein_GI_number: 19704491 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Fusobacterium nucleatum # 6 771 1 766 766 1105 82.0 0 MFEVNMQYFDIYIDSTKGIYTYSDKNDEFEIGDNVIVPFRNIKKTGFIIRKNLKENFDFK VLNISSKVKNSLKLSEEQIKLIEWINDYYLASYDSIIKAMIPKNVKIKYNNIYCINFEKN NLLIENSTNDIIKYIISLATISYNTAKTKFKKKTIDSLVEKEFLSLEDNSIQVKIEKFLE LKEENKDIFEYLYKKTFIKKEKLEEKFKRNDIKELEEKEILKVEASLNEKKEYSTEEVEK IQKNGSLLNEEQLAVKDKIINSDKKYFLLKGVTGSGKTEIYIELIKSAFFEGYGSIFLVP EISLTPQIIERFQSEFKNNIAILHSALSDVERAKEWESIYTGEKKIVLGVRSAIFSAVKN LKYIILDEEHEATYKQDSSPRYNAKYVAIKRCLDEGAKLILGSATPSIESYYYAKSGIYE LLNLDKRFANAELPDIEIVDMKQEDDLFFSKTLLEEIKNTLLRDEQVILLLNRKGYSTYI QCKDCGYVEECDSCSIKMSYYKSLNKYKCNYCGRQIHYTGKCSKCGSTNLIHSGKGIERV EEELRKYFDVPMVKVDSDLSKNKDNFSKIYKDFLNKKYSILIGTQIIAKGLHFPDVTLVG VINSDIILNFPDFRSGEKTFQLLTQVSGRAGRAGKKGKVIIQTYEPENNVIKDSKEENYE LFYNREINSRKVFSYPPFSKILNIGFSSEDEKRLIEVSREFYEEIKNQDIELYGPMPSMV YKVQKRYRMNIFAKGSRAKIDMFKRYLKKKLDEFNDDKVRIVVDIDPINLM >gi|292606586|gb|ADGG01000024.1| GENE 27 23519 - 25681 2327 720 aa, chain - ## HITS:1 COG:FN1155 KEGG:ns NR:ns ## COG: FN1155 COG0768 # Protein_GI_number: 19704490 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Fusobacterium nucleatum # 14 720 2 711 711 1025 76.0 0 MRKKFNILRFLIFLTITTISGYFIYIKNFFLLVTLGFLLIYGTFSYAVMKNWKKKKLFGQ RSSLMLLIILFFLIIYALQLLRTQFLLKSKYVGQMNKQLISVSKEVGQRGAIYDSNGKKL AFNKRLYTISINPASLNDEKFHDNILKDIRAIKESGIIPLSENIEEELLELAKENVKYKR IARNVDDEQKKEIIELIANIEREKVKGRPKYKSVLDFERSIDRKYYKSEEYDKLVGMVKE TEDTNDEKIGISGLEKQYQNYLVERKRDITKLYGLNKKNTLALSKETLFSDLNGKNIYLT IDADLNFILNDEMKTQFKNVNAYEAYGLIMDPNSGKILAVAAFSKDKDLLRNNIFQSQYE PGSIFKPLIVAAAMNEGFITPNTQFNVGDGRIVRSKKTIKESSRSTRGVITTREVIMKSS NVGMVLISDYFTNALFEQYLKDFGLYDKTGVDFPNELKPYTLPYEEWDGLKKNNMAFGQG IAITPIQMITAFSAVVNGGTLYKPYLVEKITDGEGIVIRRNTPTVVRKVISDKVSESMRS ILADTVDKGTGKRARIEGYSVGGKTGTAQLSGGKSGYVRNEYLSSFIGFFPADKPKYVIM AMFMRPQSEIQSNRFGGVVAAPVVGNVIRRIIKEEEGFAKDIEKININSEKIGVPKSNLE AVNYEDVMPDLEGMSPQEVLSVFKETDIDIEVVGTGLVVEQKPAAGDSLKDVKKVKIILK >gi|292606586|gb|ADGG01000024.1| GENE 28 25665 - 26915 918 416 aa, chain - ## HITS:1 COG:FN1154 KEGG:ns NR:ns ## COG: FN1154 COG1295 # Protein_GI_number: 19704489 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 21 415 1 395 396 565 84.0 1e-161 MINLFENFKLKDFNTKNLKLMLKRAYEKYKGANSSFWVTSLSFYTILAIVPILAILVSLG SWFGAKDYIINQIKDIAPLKGETLELLTDFSNNLLMDARSNVLAGVGFIFLGSTFIKMFS LIEDAFNEIWHIKKSRSLIRKISDYISFFIFLPLVFITLNGISLFFLAKIKDIGFLYYLI KNILPLLSMTIFFTAVFLVMPNTTVKVFPALVASIIVSVAFFMFQYIFILLQFLLIGYST VYGSFSVIFIFIIWIRIFWFIVILGVHICYLIQNANFDINIENDAINISFNSKLYITFKV LEEMVNRYLNNQSPVNITELRKVTTSSPFLIGNILDELIRGGYVVSSLDYSEKVFCLTKN IEEIHLKEIYDFIANTGEEIFILQDGKITDDIEKIIIDKDYNRTLKSLGGEVAEKI >gi|292606586|gb|ADGG01000024.1| GENE 29 26931 - 27260 463 109 aa, chain - ## HITS:1 COG:no KEGG:FN1153 NR:ns ## KEGG: FN1153 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 109 12 109 109 123 74.0 2e-27 MKKILAMLALLSITSNATEVFSEYYVMEKVIPLLTNAESYTLNGEEVKAVKVDRKVLKAL GTTDDPFYYTNSNQEKKLVRVGDYMVTPVTFATIDSASSKEFNSNFIKK >gi|292606586|gb|ADGG01000024.1| GENE 30 27285 - 28475 1695 396 aa, chain - ## HITS:1 COG:FN1152 KEGG:ns NR:ns ## COG: FN1152 COG0436 # Protein_GI_number: 19704487 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 1 396 1 396 396 698 87.0 0 MRISEKALNMKYSAVRKLAPLATEAESKGVKVYRLNIGQPNIETPELFFEGLRNIPDHVI RYADSRGIKELLDQVIEVYSRDGHVLKKEDIIVTQGGSEALTMAMLAICNPGDEVLVPEP FYSNYKSFIDIAGAKIVPIATDITNDFALPKKEGIKKLISPRTKAILYSNPCNPTGKVYT KEEVELMAELAVENDLFIVADEPYREFIYDDNDKHYSLLDVEKARENTIIIDSVSKHYSA CGARVGFLISRNEEFMTYIMKFCQARLAAPTVEQYAVANLMKAPKEYFKEIKEIYNRRRD IIVNSLNKIEGVTCSAPKGAIYAFAKLPVDSSEEFCKWLLTDFRYDNSTVMLAPGEGFYE TEGLGKQEVRFSFCVGEEDIEKAMKVLEEALKVYKK >gi|292606586|gb|ADGG01000024.1| GENE 31 28728 - 30278 1541 516 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1523 NR:ns ## KEGG: Cphy_1523 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 73 372 71 313 353 99 29.0 4e-19 MLLNTQNINEITDFLNTLSFNDFKNIVEQYSNKNNANFDTQMETMVTMSLQSRLNKLGVN CTCPKCNSSLKVKNGKRKNDIQEYKCKECGTKFTAFTNTILEKTRWHWDIWIKVLEMTIN NFSIKKMVNILENDYGCTNINEKTVWLWRMKLIHSIATLPMPKLNGVIQVDETFIRESQK SSRKLVSYINGEERTARYGRVSSKYGIMGTEFATVTTAIDSSGYSVCKVTGLGKLTNEMF IDLFSDYFNNPSYICSDGNLVYEKYCEIFNIPHYIKPSNYSDILLKNGYDDCKTVEDREK LMLKLYNNDLIDKITYKGKLNYIEFKNLKTNNKLSLARVNELHKDLKKFIYTDKTNVSTK YLEDYIGFFTYLKNWKVRFNHYPSSKKDIEQIFEEILTAKVNYIVNDIKTKELDLPKPSG KYMNILIEETKKVREITKNKYFKFNEEDGVVTFNKREYLLDIPRYKLYNLCKEYNIKRFR KLAIWSIVTLLLKQSDIDIKIYQLLEKDRYLRNNDE >gi|292606586|gb|ADGG01000024.1| GENE 32 30327 - 31742 1585 471 aa, chain - ## HITS:1 COG:no KEGG:jhp0940 NR:ns ## KEGG: jhp0940 # Name: not_defined # Def: hypothetical protein # Organism: H.pylori_J99 # Pathway: not_defined # 20 325 4 282 325 138 33.0 4e-31 MKLNRNKLKILEKDLGFSLVNFSECKSSFKDYGRSSMRIESKNINDELYLIKVMEREVAN HYRDNKNPKSTYVNSIYSEYISCNIGKMLELNIQEVILGYKTHNQANKSLSPILTPCVAC KDFCKKEERLIPFDVIFTGISEDEKINYNKNNIYDVLEVIKKQKFVNSDSLKEHFLDMFV FDSFIGNFDRHGKNWGIIENTSTNEYRIAPIFDCGSSLHPKTDRYRIKKYAKAFKESNNN IREKAFGTPVSYFKDENGKKLNYYEFLINDDFDCNCNIAKSILKIVPKIVRLNEDSVIDN LINSLKVAIGEERAYVITNELKFKVEEMLMPTLEISKELLNKEIDEFILKDYSEFNQYNN KEKREFLSEIKNILEMQKLLIENNSNNFDTKDLYQRVDEFLESKNTKDMKAVLSYLEKNN FPINYTDHFKEKFRLEIEKSSENKEKTYNPKKTKEDEKVEKKKEFDISDKF >gi|292606586|gb|ADGG01000024.1| GENE 33 31754 - 32080 533 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782539|ref|ZP_06747865.1| ## NR: gi|294782539|ref|ZP_06747865.1| DNA double-strand break repair Rad50 ATPase [Fusobacterium sp. 1_1_41FAA] # 1 108 1 108 108 132 100.0 6e-30 MSRNQEIKFVKYWEENVKEEYKNERHNFFTYDWWFEKLPKDLKEIILKIDNSSSEDDNYD SYLEELEMEIKDFIFEKKHGNYEDEEVEYLFEFMGFSEMTNNDDLEEE >gi|292606586|gb|ADGG01000024.1| GENE 34 32095 - 32364 350 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782540|ref|ZP_06747866.1| ## NR: gi|294782540|ref|ZP_06747866.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 89 1 89 89 137 100.0 3e-31 MFNLEYFANDNYKVLKFLYNNQIQVKDEYYIVLSQQEIADMVQFSKLKTNGIMQELREKG FIANYENKRRKYIITDMGYKVIELMSKNR >gi|292606586|gb|ADGG01000024.1| GENE 35 32594 - 33934 1132 446 aa, chain - ## HITS:1 COG:FN0667 KEGG:ns NR:ns ## COG: FN0667 COG0534 # Protein_GI_number: 19704002 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 416 6 421 426 613 90.0 1e-175 MKKSYDMTKGKIWVTILSFSLPLLGASLIQQLYNTADMIFVGNFVGKEATGAVGASSLLF TCIIGLFTGVSIGVGVAVAQKIGSKDYDIASKVSHTAITFGIFGGVILTILGYFSAEFLL MIMKTPKEIMTDSVIYLKVYFLSMLPMILYNIGAGIIRSTGNSKTPFYILIIGGITNVLA NYFFIVILKKGVLGVAIATTLSQTLTALIVLSYLFKNKTIIKFKTSELKIDFSLLKQILY FGLPAGIQSMLITFSNIIVQYYINGYGGDAVAAYATYFKLENFIWMPIVAIGQASMTFSG QNVGANNYQRVKKGAFISILLSGGLSILLATIILTFSHTFMRIFIKNEDIIYLGSQIAFT TFPFYWLYSILEVLGSSLRGMGYSIVSMYITTICLCAVRISLLYLISKFNFDFKSVAYVY PMTWFITASIFIIVFLKIINKKIKKH >gi|292606586|gb|ADGG01000024.1| GENE 36 34051 - 34464 600 137 aa, chain - ## HITS:1 COG:AGl3039 KEGG:ns NR:ns ## COG: AGl3039 COG2510 # Protein_GI_number: 15891634 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 135 59 176 180 114 54.0 6e-26 MWFIFAILSAIFAALTSILAKIGIEGVNSNLATAVRTIVVVLMAWLMVFITGSQNGLMDI SKKSWIFLILSGLATGASWLCYYKALQIGEASKVVPIDKLSIVITVALAFLFLGEQITLK TLIGCSLIAVGTFVMIL >gi|292606586|gb|ADGG01000024.1| GENE 37 34586 - 35788 997 400 aa, chain + ## HITS:1 COG:CAC0707 KEGG:ns NR:ns ## COG: CAC0707 COG1508 # Protein_GI_number: 15893995 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Clostridium acetobutylicum # 9 397 13 462 464 183 32.0 6e-46 MILEQKLNQSLKLSQTMKMSLNILEMSMLNLNNFIKNEFSSKFGVEINYSKQETYSDDDR LEFSFPCEEENFFQILEEQLSYFNINQKIKDICIFIINNLNNKGYLEISKIEIKDILSLS NKELEEAFNIIYSLDPCGVGAYSLEECLKIQLERKKIKDKKLNLLIDNFLFPLADKKYDL IKEKLNIDESTLTKYIDIIKSLNPIPSRGYNVGKIRKIIPDIFVKQINNEITYEINQDLI PQINIKNNINDEEYKRLNEIIHCIEKRFHTLEKIIKIVLREQKDFFITKGKKMNVLKISE LASELNLSSSTVSRAIKEKYIKSDFGIISLRKLFNLSSTIFLCQEKIAEYIENEDRKKPY SDQDIVKLLENDGIKIARRTVSKYRIDLGYKSSVERKISL >gi|292606586|gb|ADGG01000024.1| GENE 38 35898 - 36803 1356 301 aa, chain + ## HITS:1 COG:FN0668 KEGG:ns NR:ns ## COG: FN0668 COG0803 # Protein_GI_number: 19704003 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 301 5 312 312 499 89.0 1e-141 MKKIFKLLTIMMISLLVIACGEKKESGKIKVTTTLNYYTNLIEEIGGDKVEVTGLMKEGE DPHLYVATAGDVDKLQNADLVVYGGLHLEGKMTEIFDNLSNKYILNLGEQLDKNLLHKEN ENTYDPHVWFNTKFWAIQAQAVKDKLAEISPENKEYFESNLQAYLKSLDEATEYIQAKIN EIPEESRYLITAHDAFAYFAEQFGLQVKAIQGVSTDSEIGTKQIEDLATFIVEHKIKAIF VESSVNHKSIEALQEAVKAKGGNVEIGGELYSDSMGDKENNTETYIKTIKANADTIANAL K >gi|292606586|gb|ADGG01000024.1| GENE 39 36826 - 37512 263 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 3 208 11 222 312 105 32 4e-22 MNAIEIKNLTVAYGENIALEDLNLNIEVGSLMALVGPNGAGKSTLIKTILKFLKQITGEI KINAKTLAYVPQRNSVDWDFPTTLFDVVEMGCYGRVRLFKRVSKEEKQKVLKAIEQVGML EFKDRQISELSGGQQQRAFIARALVQEADIYLMDEPFQGVDSTTEKSIVEILKQLKAEGK TIIVVHHDLQTVPTYFESVALINKAVIVSGKVSEVFTQENIDVTYRKI >gi|292606586|gb|ADGG01000024.1| GENE 40 37520 - 38437 920 305 aa, chain + ## HITS:1 COG:FN0670 KEGG:ns NR:ns ## COG: FN0670 COG1108 # Protein_GI_number: 19704005 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Fusobacterium nucleatum # 1 303 1 303 305 397 85.0 1e-110 MNEILKLFLSSYTFKVVTLGCTLLGIVSAIIGTFAVLKKESLLGDGISHSALAGICLAFL ISGKKELYILLTGALVIGFLCIFLIHYIERNSKVKLDSAIALLLSTFFGLGLVLLTYLKK VPGAKKAGLNRFIFGQASTLIAKDIYLIIIVGLVLISLVILFWKEIKISIFQADYAKTLG IQSNKINFLVSTMIVVNVIIGIQIAGVILMTAMLVLPSVAARQWSKKLSIVTILAAIIGG ISGAMGSIISTLDASLPTGPLIILVSGTFVLISFLFSKKGIIARNYRIYTRNRKLRLQEN KGDNI >gi|292606586|gb|ADGG01000024.1| GENE 41 38434 - 39291 715 285 aa, chain + ## HITS:1 COG:FN0671 KEGG:ns NR:ns ## COG: FN0671 COG1108 # Protein_GI_number: 19704006 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Fusobacterium nucleatum # 1 280 1 280 280 321 87.0 9e-88 MSAGLTIQLIAILISVACSLLGVFLVLRSMSMLTDAISHTVLLGIVLSFFITHKLDSPLL IVGATLTGLLTVYFVEVLSDSKLVKEDAAIGIVLSILFSIAVILISKYTANIHLDIDAVL LGEIAFAPFHTTEIFGFKIATGLVNGFAILVVNLLFITIFFKEIKISIFDKALALTLGLL PEVFHYLLMTLVSVTSVVSFDIVGATLMISFMVGPATTAYMISKNLKTMLVYSSLIGIIS SIIGYHLAVFLDVSISGSIAVVIGIIFFLVLFGKRFKKYVKIEEN >gi|292606586|gb|ADGG01000024.1| GENE 42 39567 - 41063 2051 498 aa, chain + ## HITS:1 COG:SP0886 KEGG:ns NR:ns ## COG: SP0886 COG0286 # Protein_GI_number: 15900769 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 494 1 496 497 534 57.0 1e-151 MITGEIKSKVDKMWEYFWTGGLTNPVDVIEQLTYLIFMKRLDQEEQRKEKEQKLGSIFGN FDEKFIFGENHQDIRWSNLIQLGDPKQLYDKVRNEAFEFIKNLDEDKDSVFSQYMENAIF KVPTPAVLQNTMDTIEEIFNNPQMVEDKDTKGDLYEYLLSKLSTSGKNGQFRTPKHIINM MVELMKPTVEDKIIDPACGTSGFLVSSIEYIKKNFKDILATSPEIYKYFSTAMIHGNDTD ATMLGISAMNLLLHDMKTPKLKRIDSLSTDYSEESDYTLILANPPFKGSVDEALLSNTLT RVVKTKKTELLFIALFLRLLKIGGRGAVIVPDGVLFGASNAHKNLRKELIENNQLEAVIS MPSGVFKPYAGVSTGILIFTKTGKGGTDNVWFYDMTADGYSLDDKRNPVEENDIPDIIER FSNLENEKDRKRTDKSFFVPKQEIIDNDYDLSINKYKEIVYEKVEYEEPKVILEKLEELS KSIDEKLKELKVMLDEDI >gi|292606586|gb|ADGG01000024.1| GENE 43 41050 - 42165 820 371 aa, chain + ## HITS:1 COG:MJ1531 KEGG:ns NR:ns ## COG: MJ1531 COG0732 # Protein_GI_number: 15669726 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanococcus jannaschii # 113 349 136 394 425 148 40.0 2e-35 MKIFNKNEWKKVKLGDVCEVITGNTPLKKIKEYWDKDEVPFITPPELKYEGINYITPNIY VSKIGAKQGRIIPKNSICVCCIGSLGKLGILKEDAITNQQINSLILKDKNVDLLYLYFYL KTIKNNLESIASSTTVKIINKSSFEKIDINLPSLEIQKKISKKLELLENNINFRKSQLNS LNELSKSLFTKFNKNGVEKQLNDVADIIMGQSPLSQSYNKDKKGLPFYQGKTEFSDIYIK EATVYCNSPIKVVEENDILMSVRAPVGDVNIATQKSCIGRGLASIKPKKIDYLYLFYLLK EQKSKIEKIGVGSTFKAINKNNISTLKISIVEKDKQNKIRNYLSSIEKLKFIFGRPLIST TFKNSYKRVSA >gi|292606586|gb|ADGG01000024.1| GENE 44 42165 - 43325 1112 386 aa, chain + ## HITS:1 COG:MJ0130m KEGG:ns NR:ns ## COG: MJ0130m COG0732 # Protein_GI_number: 15669898 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanococcus jannaschii # 9 360 24 393 425 131 28.0 3e-30 MNKNIQYKKLGEICDFISGGTPSKSKNEYWKNGNIPWIKISDFKEKYIKFSDEKITKIGL ESSSAKILKKGTILYTIFASVGKVAILDIEATTNQAVVGINLKEDNSIDKDFLYYFLCSI ENNIKKQARGVAQNNINISILKNINIPILPMSFQKNIVKTLNKLENILDNLKQKKLLINF LNKSLFTTMFGDIEKKSEYHKLSNICDVRDGTHDSPEYITTDKRFPLITSKNLKGDKIDF SEVNFISEADFNKINVRSKVDIGDILMPMIGTIGNPIIVKIDKKFSIKNLALIKFKNSQI INTFLKFLLLSDYFNLIISQKNKGGTQKFLSLSDIRNFLIPIPPIELQNKFAERIEKIEK LKFEIEKSIETAQNLYDSLISKYFDN Prediction of potential genes in microbial genomes Time: Thu May 19 21:44:58 2011 Seq name: gi|292606585|gb|ADGG01000025.1| Fusobacterium sp. 1_1_41FAA cont1.25, whole genome shotgun sequence Length of sequence - 6137 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 91 - 282 172 ## gi|291461092|ref|ZP_06026918.2| conserved hypothetical protein - Prom 521 - 580 6.5 + Prom 66 - 125 5.6 2 2 Op 1 2/0.000 + CDS 252 - 566 186 ## COG3177 Uncharacterized conserved protein 3 2 Op 2 . + CDS 612 - 1601 1282 ## COG0582 Integrase 4 2 Op 3 . + CDS 1664 - 5047 3501 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 5052 - 5102 9.1 + Prom 5102 - 5161 11.1 5 3 Op 1 . + CDS 5194 - 5856 822 ## COG1373 Predicted ATPase (AAA+ superfamily) 6 3 Op 2 . + CDS 5903 - 6046 131 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 Predicted protein(s) >gi|292606585|gb|ADGG01000025.1| GENE 1 91 - 282 172 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291461092|ref|ZP_06026918.2| ## NR: gi|291461092|ref|ZP_06026918.2| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 63 1 63 63 77 100.0 2e-13 MNNTNIENVALKFAILLVLVYNIFRTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIK VAV >gi|292606585|gb|ADGG01000025.1| GENE 2 252 - 566 186 104 aa, chain + ## HITS:1 COG:pli0008 KEGG:ns NR:ns ## COG: pli0008 COG3177 # Protein_GI_number: 18450294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 29 104 156 242 254 66 39.0 1e-11 MQHFQCWCYSYPTSTCLTANTLTSARATSVLTHLIKFEKIHPFSDRNGRTGRLIMLALML ENRAKYMDILRNQDIENFVSLVEPLIEEEKKRIIAFKKSASLQI >gi|292606585|gb|ADGG01000025.1| GENE 3 612 - 1601 1282 329 aa, chain + ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 9 328 8 320 321 386 65.0 1e-107 MVDTLILDIKQAMSSTLTNGQMEKLHKVLAHYLYDLEIVKKEGADRDEKQNIEYLEAFLS AKHVEGCSRKSLKYYKATIENLFKKIDKSIKHITTNDLREYLDNYQKEGNASKITIDNIR RIFSSFFAWLEEEDYILKSPVRRIHKVKTGTVVKETYSDEAMEIMRDNCKSLRDLAIIDI LASTGMRVGELVKLNIEDIDFEGRECVVFGKGDKERKVYFDARTKIHLHNYLKTRDDDNS ALFVSLLKPHKRLQISGVEIMLRELGKKLNITKVHPHKFRRTLATKAIDKGMPIEQVQQL LGHQKIDTTLQYAMVSQNNVKISHRKYIG >gi|292606585|gb|ADGG01000025.1| GENE 4 1664 - 5047 3501 1127 aa, chain + ## HITS:1 COG:MA2418 KEGG:ns NR:ns ## COG: MA2418 COG4096 # Protein_GI_number: 20091249 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Methanosarcina acetivorans str.C2A # 1 1081 1 1093 1146 666 36.0 0 MSNFDFLKDEFIDLYELCLEAEKNCYIKPRTSAFYSRLALEFCVGLVYKFEKIQTSYNEM SLNDLINKKEFKDLFQDESQIAGLNLIRKFGNDAAHMLKNIISDTGRNLPLNKDIALNSL KGIFDFTLWIAYCYGSTLKTDDIKFDEKYITHSSSEEENINDIKLTDNDVKNNIEKIKVV PTKKHNTKINNSNFSEKETRKLFIDFLLMKAGWNLNDKNMFEYEVEGLKSTSSGKGNIDY VLWGDSAYPLAIIEAKKASYNAKKGEFQALEYAEALERKFNFFPIRFVTNGFEIFIYENK NSIPRRIYGFYRKEELLKIIARRNEKITSNDISINKKIIDRYYQERAVKKAIENYISGNR KSLLVMATGSGKTRVAISLVDCLSRLNMVKRTLFLADRVALVKQALNSFKNSLPDYTLVD LVAEKDRDNAKIVFSTYQTMMTESEKSREDGTNKYGVGAFDLIILDEAHRSIYQKYGDLF EYFDSLILGLTATPKNEIDRNTFKVFDMNSKEPTDSYDLFEAAKDEFLVLPKIKEISLNY PENGIVYSKLSEEEKEKYETLFDEEDSMPEEISGDSLNSWFFNEGTTSKVLTTLMEEGYK IESGDKLGKTIIFAKNDKHAEHIVETFNKLYKNLDGEFCQKITTKVEKAQTLIERFVNPN SLPQIAVSVDMLDTGIDVPQILNLVFYKKVKSKAKFWQMIGRGTRKCKDIYGPGQDKKDF LILDFCRNFSYFELQSSFDEDNTKLGKSLSSRIFENKVKMIYKLQNLEYQMDENYKKLWE DLVNEVYDLISALNEENISVRTKISYVKKYKNIDVLRNLEEKNVDEIIKNLSSLPFPVTE KTEMEKKFENLILKIQLKLFDNKKVENEKMEISDIAKGLAKKGTIKEIQKNTDYIMKLIK DENYLKNIDILELKNLKDIIEPLTIFIDADGKHLNYVTGDFEDTYISTEVKDINIFASAY INSKAKFQKYLDKNKELLSIKKLRNNIELDEEDLKELKQLLYSNEEVSLESLKNENNTEI EKISSLYGKKESFGIFIRSLVGLDRTAINKEFSEFLNKEKFNSNQIELINLVIENIVKYG AYSKSEIPKLSNDILGTSIFDIFTDNNDLQKIVNIIDKINSNAPKLL >gi|292606585|gb|ADGG01000025.1| GENE 5 5194 - 5856 822 220 aa, chain + ## HITS:1 COG:FN0672 KEGG:ns NR:ns ## COG: FN0672 COG1373 # Protein_GI_number: 19704007 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 220 1 220 438 379 90.0 1e-105 MLKKENELKNRSHYLEKLIEFKDTDFVKIITGIRRCGKSSLMKLMIKHLLDNGIEKNQII QINFESMEFKRITVEDLYNYVKSNLPKDKKAYLFFDEIQKVSEWQDAINSFRVDFECDIY ITGSNAFLLSSEYATYLAGRSIEIKVYPLSFIEFIDFHGYKIIEKKSLTGAISRKVENEN GEAYEIKELFDAYITFGGMPSLTELPLEIDKALTILDGIY >gi|292606585|gb|ADGG01000025.1| GENE 6 5903 - 6046 131 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 1 47 43 89 89 85 89.0 1e-15 MRHVLVEYELHEDFSKHIGKLVCRHGAKPCNKETKLLGTLKASITTT Prediction of potential genes in microbial genomes Time: Thu May 19 21:45:22 2011 Seq name: gi|292606584|gb|ADGG01000026.1| Fusobacterium sp. 1_1_41FAA cont1.26, whole genome shotgun sequence Length of sequence - 49388 bp Number of predicted genes - 56, with homology - 56 Number of transcription units - 16, operones - 9 average op.length - 5.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 704 543 ## COG0675 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 749 - 1456 689 ## COG1373 Predicted ATPase (AAA+ superfamily) + Prom 1497 - 1556 5.2 3 2 Tu 1 . + CDS 1604 - 1867 314 ## gi|294782557|ref|ZP_06747883.1| conserved hypothetical protein + Term 1891 - 1948 5.3 - Term 1877 - 1936 13.2 4 3 Tu 1 . - CDS 1952 - 2728 1130 ## COG2116 Formate/nitrite family of transporters - Prom 2790 - 2849 7.7 5 4 Op 1 1/0.250 - CDS 2869 - 3513 791 ## COG4122 Predicted O-methyltransferase 6 4 Op 2 . - CDS 3507 - 4811 1356 ## COG0144 tRNA and rRNA cytosine-C5-methylases 7 4 Op 3 . - CDS 4821 - 5513 1117 ## FN0602 hypothetical protein 8 4 Op 4 13/0.000 - CDS 5589 - 6356 171 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 9 4 Op 5 9/0.000 - CDS 6356 - 7240 1106 ## COG4120 ABC-type uncharacterized transport system, permease component - Prom 7265 - 7324 5.5 - Term 7317 - 7347 1.0 10 4 Op 6 . - CDS 7442 - 8458 1674 ## COG2984 ABC-type uncharacterized transport system, periplasmic component - Term 8473 - 8506 5.1 11 5 Op 1 22/0.000 - CDS 8529 - 9425 1078 ## COG0142 Geranylgeranyl pyrophosphate synthase 12 5 Op 2 1/0.250 - CDS 9427 - 9654 447 ## COG1722 Exonuclease VII small subunit 13 5 Op 3 1/0.250 - CDS 9676 - 10224 326 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 14 5 Op 4 1/0.250 - CDS 10236 - 11267 1155 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 15 5 Op 5 32/0.000 - CDS 11251 - 12399 1204 ## COG2890 Methylase of polypeptide chain release factors 16 5 Op 6 . - CDS 12399 - 13472 1516 ## COG0216 Protein chain release factor A 17 5 Op 7 . - CDS 13485 - 13913 566 ## FN1333 hypothetical protein 18 5 Op 8 1/0.250 - CDS 13918 - 14946 1082 ## COG0860 N-acetylmuramoyl-L-alanine amidase 19 5 Op 9 . - CDS 15012 - 15296 358 ## COG1862 Preprotein translocase subunit YajC - Prom 15328 - 15387 14.1 + Prom 15352 - 15411 11.2 20 6 Tu 1 . + CDS 15437 - 15661 296 ## COG1314 Preprotein translocase subunit SecG + Term 15672 - 15720 9.2 - Term 15664 - 15699 5.1 21 7 Op 1 . - CDS 15726 - 16532 988 ## FN1200 hypothetical protein 22 7 Op 2 . - CDS 16566 - 16937 484 ## FN1201 hypothetical protein 23 7 Op 3 1/0.250 - CDS 16944 - 17720 1265 ## COG0171 NAD synthase 24 7 Op 4 1/0.250 - CDS 17723 - 18601 1242 ## COG1161 Predicted GTPases 25 7 Op 5 1/0.250 - CDS 18582 - 19280 891 ## COG0313 Predicted methyltransferases 26 7 Op 6 1/0.250 - CDS 19291 - 20637 1699 ## COG0793 Periplasmic protease 27 7 Op 7 1/0.250 - CDS 20638 - 21426 901 ## COG1189 Predicted rRNA methylase 28 7 Op 8 1/0.250 - CDS 21413 - 22252 939 ## COG3481 Predicted HD-superfamily hydrolase 29 7 Op 9 1/0.250 - CDS 22236 - 24038 1932 ## COG1154 Deoxyxylulose-5-phosphate synthase 30 7 Op 10 1/0.250 - CDS 24052 - 24351 243 ## PROTEIN SUPPORTED gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 31 7 Op 11 1/0.250 - CDS 24360 - 26276 2407 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 32 7 Op 12 . - CDS 26221 - 28194 2152 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 33 7 Op 13 . - CDS 28184 - 28540 74 ## FN1212 hypothetical protein 34 7 Op 14 . - CDS 28617 - 29597 1519 ## FN1213 hypothetical protein 35 7 Op 15 5/0.000 - CDS 29587 - 30906 389 ## PROTEIN SUPPORTED gi|229207303|ref|ZP_04333755.1| SSU ribosomal protein S12P methylthiotransferase 36 7 Op 16 1/0.250 - CDS 30893 - 31600 741 ## COG1385 Uncharacterized protein conserved in bacteria 37 7 Op 17 1/0.250 - CDS 31610 - 32035 619 ## COG1959 Predicted transcriptional regulator 38 7 Op 18 1/0.250 - CDS 32013 - 33002 1225 ## COG2255 Holliday junction resolvasome, helicase subunit 39 7 Op 19 . - CDS 33040 - 33639 734 ## COG4399 Uncharacterized protein conserved in bacteria - Prom 33753 - 33812 10.3 + Prom 33632 - 33691 10.8 40 8 Op 1 . + CDS 33832 - 34287 601 ## FN1219 hypothetical protein + Prom 34344 - 34403 13.8 41 8 Op 2 . + CDS 34450 - 35370 653 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Prom 35419 - 35478 11.5 42 9 Op 1 1/0.250 + CDS 35498 - 36244 898 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 43 9 Op 2 . + CDS 36258 - 36761 721 ## COG0716 Flavodoxins 44 10 Tu 1 . - CDS 36922 - 38109 1581 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 38131 - 38190 8.8 - Term 38137 - 38180 8.2 45 11 Op 1 2/0.000 - CDS 38192 - 39166 1467 ## COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 46 11 Op 2 6/0.000 - CDS 39186 - 39989 1060 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 47 11 Op 3 . - CDS 39993 - 41060 1594 ## COG1145 Ferredoxin - Prom 41160 - 41219 11.7 - Term 41159 - 41198 6.3 48 12 Tu 1 . - CDS 41234 - 41941 923 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 41998 - 42057 9.3 + Prom 41974 - 42033 8.1 49 13 Tu 1 . + CDS 42055 - 43422 1187 ## COG0534 Na+-driven multidrug efflux pump + Term 43427 - 43458 3.1 - Term 43414 - 43445 3.1 50 14 Op 1 5/0.000 - CDS 43448 - 44521 1195 ## COG0082 Chorismate synthase 51 14 Op 2 . - CDS 44502 - 45758 1277 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 52 14 Op 3 . - CDS 45770 - 46255 601 ## FN0932 hypothetical protein - Prom 46290 - 46349 7.2 + Prom 46731 - 46790 8.9 53 15 Op 1 4/0.000 + CDS 46821 - 47117 122 ## COG0640 Predicted transcriptional regulators 54 15 Op 2 5/0.000 + CDS 47114 - 48115 1233 ## COG0701 Predicted permeases 55 15 Op 3 . + CDS 48146 - 48511 614 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Term 48852 - 48890 1.3 56 16 Tu 1 . - CDS 48918 - 49205 501 ## FN0038 hypothetical protein - Prom 49231 - 49290 7.9 Predicted protein(s) >gi|292606584|gb|ADGG01000026.1| GENE 1 3 - 704 543 233 aa, chain + ## HITS:1 COG:alr7153 KEGG:ns NR:ns ## COG: alr7153 COG0675 # Protein_GI_number: 17233169 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 2 209 176 381 408 166 44.0 3e-41 QRELNKENVLGIDLGIDNLCTCVTNTGASFIIDGRKLKSINQYYNKINAKLQSIKDKQKI ERTTLRQKRITRKRNNRINDYLSKAARTIVNYCLNNDIGKLVLGYNEDFQRKSNIGSINN QNFVNIPYGKLRDKLIYLCKLYGIEFKLQEESYTSKASFFDGDEIPIYDKENLQEYIFSG KRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRGELNTPKRIRVV >gi|292606584|gb|ADGG01000026.1| GENE 2 749 - 1456 689 235 aa, chain + ## HITS:1 COG:FN0672 KEGG:ns NR:ns ## COG: FN0672 COG1373 # Protein_GI_number: 19704007 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 16 235 219 438 438 370 90.0 1e-102 MEPATLALVGCQSWEVQSSVVIRDILEREKQKDRRQVTDSSLLRKIIMFLADNIGNNTSI NSISNVLLNEKLIETKPAVQTVQSYVATLLEAYVFYEIKRFDIKGKDFLKTLGKYYIVDI GLRNYLLGFRNRDIGHIIENIVYFELLRRGYDVAIGKIGDNEIDFIATNANIKIYIQVTE NIASSSTRERELAPFYKIQDNFEKIIITNDESYLGVHDGIKIIRLVDFLLDENIL >gi|292606584|gb|ADGG01000026.1| GENE 3 1604 - 1867 314 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782557|ref|ZP_06747883.1| ## NR: gi|294782557|ref|ZP_06747883.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 75 17 91 103 77 100.0 3e-13 MVKTINKNQVNIKLNENSNEIATLIEKYTETTVNSKKAIIAKKIIKYIIIVFGVFFVLSL FIIAIPIYLVILTLFIASSISILKSII >gi|292606584|gb|ADGG01000026.1| GENE 4 1952 - 2728 1130 258 aa, chain - ## HITS:1 COG:FN1141 KEGG:ns NR:ns ## COG: FN1141 COG2116 # Protein_GI_number: 19704476 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Fusobacterium nucleatum # 1 257 1 256 256 379 84.0 1e-105 MADGHKTPTELVDYIIKVGIDKATKPLFKLMLLGIFGGAFIALGGAGNIISSSTLVKTDP GFAKFLGAAVFPVGLILVVTLGAELFTSNCLLSVAFVNKKISFTQMIRNLVTVYLFNYVG SFIVAYITVKGGSFNADSLAYLQNIATHKVDASAYALFIKGILCNVLVCGAVIQSYTSRD TIGKLVGAWLPIMLFVLIGYDHSIANMFYLTAAKLADTSLFGVSGILYNLFYVTLGNILG ALAIGLPLYFSYYKKSDN >gi|292606584|gb|ADGG01000026.1| GENE 5 2869 - 3513 791 214 aa, chain - ## HITS:1 COG:FN0314 KEGG:ns NR:ns ## COG: FN0314 COG4122 # Protein_GI_number: 19703659 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 1 213 1 213 215 310 86.0 9e-85 MLEELKEANSYISSKIDKYRSKSLLIKEIEEDAEINNVPIISKEIREYLKFIIKSNKNIK NILEIGTATAYSGIIMAEEIQDRNGCLTTIEIDEDRFKIAKSNFEKANLKNIEQILGDAT EEIEKLNKNYDFIFIDAAKGQYKKFFEDSYKLLNKGGLVFIDNILFRGYLYKESPKRFKT IVKRLDEFIEYLYENFEDVTLLPISDGVMLVNKS >gi|292606584|gb|ADGG01000026.1| GENE 6 3507 - 4811 1356 434 aa, chain - ## HITS:1 COG:FN0313 KEGG:ns NR:ns ## COG: FN0313 COG0144 # Protein_GI_number: 19703658 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Fusobacterium nucleatum # 1 434 1 435 435 626 82.0 1e-179 MSVKYVAMKLISFVDKGSYSNIVLNDAFKEFYLTAKEKAFITEIFYGVLRNKNFLDYMIE KNTKVIKKEWIRNLLRISIYQLTFMSSDAKGVVWEATEIAKKHGIAISKFINGTLRNYLR NKDLEIKKLHDEKNYEILYSIPQYFCDILEKQYGSENLNQAIISLKKIPYLSVRVNKLKY SEEEFEEFLKEKDIQIIKKVDSVYYINSGLIINSKEFKVGKIIAQDASSYLAAKNLGVKP NELVLDICAAPGGKTAVLAEEMENKGEIIAIDIHQHKKKLIEENMKKLGIDIVKATVLDA RNVNKQGRKFDKILVDVPCSGYGVIRKKPEILYTKNRENIEELASLQLEILNSAADILKD GGELIYSTCTIIFQENTENVEKFLNERKEFKVKALNIPENVSGEYDKLGGFSINYKEEIM DNFYIIKLVKEEKC >gi|292606584|gb|ADGG01000026.1| GENE 7 4821 - 5513 1117 230 aa, chain - ## HITS:1 COG:no KEGG:FN0602 NR:ns ## KEGG: FN0602 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 230 1 231 236 379 83.0 1e-104 MRIRSVETAIRADVSRNIPNGVDALGIFDNLVQPIFPFPVESLSIILSFSEMEGPTMFQV RINAPNDDLVSKGDFGVLPDQFGYGRKVINLGGILISERGKYTIDIFELGVDKKLKFIKT RRLFFADYPPQREFTDAEKQAILEDESLIRVVKTEFKPFEFANDDTVKPIKLQISLDDSV PLEEGYIAVPEDNTILVKGKKFDLTGMRRHVEWMFGKPIPRQEEEPDEEK >gi|292606584|gb|ADGG01000026.1| GENE 8 5589 - 6356 171 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 24 237 28 245 563 70 27 2e-11 MPYIELKNINKVFNPNSNREHHALKNINLIINKGDFITIIGGNGAGKSTLFNAISGVFPL DSGSISINDVEISSTKEFERAKYISRVFQNPLDNTAPRMTVAENMALALNRGERRILKFS KNKDNIALFENLLKNLNLGLEQKLNTEMGVLSGGQRQAIALLMATMKAPELILLDEHTAA LDPKTQKKIMLLSEEKVKEKNLTALMITHNLQDALTYGNRMLLLHQGEIVRDFSEEEKRK LSVTDLYKIMVDLDE >gi|292606584|gb|ADGG01000026.1| GENE 9 6356 - 7240 1106 294 aa, chain - ## HITS:1 COG:SP1070 KEGG:ns NR:ns ## COG: SP1070 COG4120 # Protein_GI_number: 15900939 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 3 294 1 288 288 213 48.0 4e-55 MDLIISAISQGLLWSLLSLGLFISFRVLNIADMTTEGSYPLGAAVCVMLIQSGYSPLTAT IIAMLVGSLAGLVTAIFINVCKIPSLLAGILTMTALLSVNLRIMKRPNLSLLNKETIFDT LSKLNLPPYFDIILLGLVVISIVILAMHLFFDTELGQALIATGDNPKMATSLGISTKKMT TLGLMLSNSLIALTGAILSQNNGYADVNSGLGVIVVALAAIIIAEVIFTDVNFLTRLVCI VFGSMIYRLLLVFVLKLNVIQANDFKLVSALLIALFLSVPELKKFSLKLGKGDK >gi|292606584|gb|ADGG01000026.1| GENE 10 7442 - 8458 1674 338 aa, chain - ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 41 338 47 344 344 261 48.0 2e-69 MKKSVLFFGALLIIVLGYYFLNNKKDNSQEQVAQEKAQVTEEKVINVGVLQLLSHPALDS IYKGMVEELARQGYEDGKNIRIDLQNAQGEQSNLALMSEKLVSEKNDILVGITTPATLSL ANATKDIPIIMAGITYPVEAGLIASEEKPGNNITGVSDRTPIKQQLELMKEIIPNLKKIG LLYTSSEDNSIKQIEEAKKYAAELGLEVKLASIANSNDIQQVTESLASEVEAIFVPIDNT IASAMATVVKVTDKFKIGVFPSADTMVADGGVLGLGVDQYQIGVETAKVIVDVINGKKPA DTPIVLANEGVIYLNEAKAQELGIEIPATIKEKAQIVK >gi|292606584|gb|ADGG01000026.1| GENE 11 8529 - 9425 1078 298 aa, chain - ## HITS:1 COG:FN1327 KEGG:ns NR:ns ## COG: FN1327 COG0142 # Protein_GI_number: 19704662 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 3 297 2 296 297 470 85.0 1e-132 MNSDFKVYLKEKTNFFETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLFTTLELL NQDIQKGVKSAIGVEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILIGDALLT YAFYMLSEKNLNILSFEQITNIISKTSAYSGINGMIGGQMIDIESENKKINLETLKYIHK HKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEDLGKPVG SDDDLHKATYPSILGMEESKKILNETVERAKKIIHNMFGEEKGKILISLADFIRERKS >gi|292606584|gb|ADGG01000026.1| GENE 12 9427 - 9654 447 75 aa, chain - ## HITS:1 COG:FN1328 KEGG:ns NR:ns ## COG: FN1328 COG1722 # Protein_GI_number: 19704663 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Fusobacterium nucleatum # 6 75 1 70 70 73 85.0 1e-13 MKGVEMAKNTFEENLENLDEIIEKLESGELSLDDAIKEYENAMKLIKTASKMLNEAEGRL IKVIEKNGEIETEEI >gi|292606584|gb|ADGG01000026.1| GENE 13 9676 - 10224 326 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 180 13 192 199 130 37 2e-29 MRIIAGEAKNRIIKTRKGFDTRPTLESVKESLFSIIAPYVENSVFLDLFSGSGSISLEAV SRGAKRAVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMD PPYQDNITTKVLKAIDKADILADDGLIICEHHLFEDLEDNIASFRKTDERKYNKKILTFY TK >gi|292606584|gb|ADGG01000026.1| GENE 14 10236 - 11267 1155 343 aa, chain - ## HITS:1 COG:FN1330 KEGG:ns NR:ns ## COG: FN1330 COG0809 # Protein_GI_number: 19704665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Fusobacterium nucleatum # 1 343 9 351 351 600 92.0 1e-171 MSTYLSDYDYFLPEELIGQKPREPRDSAKLMLINRKTGEIEHKHFYNIIDYLQKGDVLVR NATKVIPARIYGYKESGGVLEILLIKRISIDTWECLLKPAKKLKLGQKLYIGENKELIAE LLEIKEDGNRILKFYYEGSFEEVLDKLGSMPLPPYITRKLENKDRYQTVYAQRGESVAAP TAGLHFTEELLKKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHKMHEESFEISEKAAKA INEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYQFKIVDALITNFH LPKSTLLMLVSALYDREKMLEIYKLAVKEEYHFFSFGDSMFIY >gi|292606584|gb|ADGG01000026.1| GENE 15 11251 - 12399 1204 382 aa, chain - ## HITS:1 COG:FN1331 KEGG:ns NR:ns ## COG: FN1331 COG2890 # Protein_GI_number: 19704666 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Fusobacterium nucleatum # 30 382 1 353 354 525 85.0 1e-149 MNLLKILKFIEEYLKKYSFSKPRLESEKLVSYVLNLDRIALYIHHERELTEEEKTSIKQF LKQMVEEKKSFDEIKGEKKDYKTENLDIFNKSVEYLKKNGVPSALVDTEYIFSEALKVSR NTLKYSMSREIKEEDKNKIREMLMLRAKNRKPLQYILGEWEFYGLPFKVRENVLIPRPDT EILVEQCIQLMREIEEPNILDIGSGSGAISIAIANELKSSSVTGVDINEDAIELANENKV LNKVENVNFMKSDLFEKLDEDFKYDLIVSNPPYITKEEYESLMPEVKNFEPKNALTDLGD GLHFYREISKKAGSYLKDTGYLAFEIGYKQAKDVSKILEDNNFAILSVVKDYGGNDRVVL AKKAIKADNFEEIEEEEDVDLS >gi|292606584|gb|ADGG01000026.1| GENE 16 12399 - 13472 1516 357 aa, chain - ## HITS:1 COG:FN1332 KEGG:ns NR:ns ## COG: FN1332 COG0216 # Protein_GI_number: 19704667 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Fusobacterium nucleatum # 1 357 9 365 365 588 98.0 1e-168 MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF IKESFKTEKDADMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV HRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDTYRSGGAGGQHVNMTD SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVESERRLQVGTG DRAEKIRTYNFPDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQAELLSASEQ >gi|292606584|gb|ADGG01000026.1| GENE 17 13485 - 13913 566 142 aa, chain - ## HITS:1 COG:no KEGG:FN1333 NR:ns ## KEGG: FN1333 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 141 9 138 138 134 60.0 7e-31 MSKNKRVTFKSTAILLGILIILLIIKISMTSKNKIGEIEVRKVEVKAEELVKIPAYAVDK DSDSPRKYAISTKEAATSDLLQVAVQDMTKNYSEDLELKNIYFSDTTVYYEFNKKDLSEG FMQALQMVTEEIMGISEINFIK >gi|292606584|gb|ADGG01000026.1| GENE 18 13918 - 14946 1082 342 aa, chain - ## HITS:1 COG:FN1334 KEGG:ns NR:ns ## COG: FN1334 COG0860 # Protein_GI_number: 19704669 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Fusobacterium nucleatum # 5 342 1 338 338 507 78.0 1e-143 MKKKLITTLLFFLLSVLSFSAQVKDVRFHNNTCSISLNAREGEYLVSADEESRLIYIEIQ NLDSNSCEKFTKNLEYDIRDSNLFEDVAIDKTRDTVSITLQVAPKVGYVMDATNNRIDVN FHRTTKNKHLIVIDPGHGGKDPGAMRGSVVEKKIVLSVGTFLKEELSKDFNVVMTRDSDV FVVLSQRPKMANKSNAKLFVSIHANASESKNANGVEVFYFSKKSSPYAERIANFENTIGE QYGDSSDKIIQISGELAYKKNQENSIRLARKIAENISSGLALKNGGVHGANFAVLRGFNG TGVLIELGFVSNSYDAAILVDRDSQQKMAEEIAKSIKEYLTR >gi|292606584|gb|ADGG01000026.1| GENE 19 15012 - 15296 358 94 aa, chain - ## HITS:1 COG:FN1335 KEGG:ns NR:ns ## COG: FN1335 COG1862 # Protein_GI_number: 19704670 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Fusobacterium nucleatum # 1 94 1 94 94 125 86.0 2e-29 MQEIFAKYGSTGIFIVLWIGVFYFLLIRPNKKRQKEQQNLLNSLKEGTEVITIGGIKGTI AFVGEDYVELRVDKGVKLTFRKSAIANVINNSNQ >gi|292606584|gb|ADGG01000026.1| GENE 20 15437 - 15661 296 74 aa, chain + ## HITS:1 COG:FN0538 KEGG:ns NR:ns ## COG: FN0538 COG1314 # Protein_GI_number: 19703873 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Fusobacterium nucleatum # 1 74 1 74 74 111 95.0 3e-25 MSTLLNVLLFLSAFILIVLVLIQPDRSHGMTASMGMGASNTIFGINKDGGPLAKATEVVA TLFIVCSLLLYLTR >gi|292606584|gb|ADGG01000026.1| GENE 21 15726 - 16532 988 268 aa, chain - ## HITS:1 COG:no KEGG:FN1200 NR:ns ## KEGG: FN1200 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 268 1 259 259 450 88.0 1e-125 MRKKLVLLFMLALSISSFAAKPSLPKSYTVRYTHNFGRISGFVQIPKGGQFNTTSDRRPT FDELDIKNINYPELFVGAKWDKFGVYYGMKYKSFKGSATLNEDLKTHDIQLRKGDRISSK HLYAFHNLGFSYDFNINPKFTLTPKVEFSVFQFSYKFSSSGSTSVTNDERRFNAGGVRVG GEANYQFTDDFGLRFDVMTHIPHDSIKSSLDASLTASYNLYRSGNTEINAIAGIGYDSFK YKDTQKDMQNFMDSKTKPVYKLGVELKF >gi|292606584|gb|ADGG01000026.1| GENE 22 16566 - 16937 484 123 aa, chain - ## HITS:1 COG:no KEGG:FN1201 NR:ns ## KEGG: FN1201 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 122 3 124 124 143 83.0 2e-33 MQNQLKEDLNEFLKEKEELREVIGKIGGSNNSQAKIITTLFMGIVLVIFVTGIILKQLSP MTTLLLLLLIISFKIIWMLQQMQKSMHFQFWVLNSIEIRINELDKRQKKIEKILEGLEDK KKE >gi|292606584|gb|ADGG01000026.1| GENE 23 16944 - 17720 1265 258 aa, chain - ## HITS:1 COG:FN1202 KEGG:ns NR:ns ## COG: FN1202 COG0171 # Protein_GI_number: 19704537 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Fusobacterium nucleatum # 1 258 1 258 258 442 90.0 1e-124 MDKLDLNMKEVHKELVDFLKENFKKNGFSKAVLGLSGGIDSALAAYLLRDALGKENVLAI MMPYKSSNPDSLNHAKLVVEDLGIDSKVIEITDMIDAYFKNEKDPTSLRMGNKMARERMS ILYDYSSKENALVVGTSNKTEIYLGYSTQFGDAACAFNPIGDLYKTNVWELSRYLNIPKE LIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEILNEGFDKSLVENIVRR MNRSEYKRRMPLIAKIKR >gi|292606584|gb|ADGG01000026.1| GENE 24 17723 - 18601 1242 292 aa, chain - ## HITS:1 COG:FN1203 KEGG:ns NR:ns ## COG: FN1203 COG1161 # Protein_GI_number: 19704538 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 289 1 289 289 476 93.0 1e-134 MSMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVL NKSDLLEKKELEVWKKYFKEQDFADEVVEMSAETGYNLKKLYEAIEFVSKERKEKLLKKG LKKVSTRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTRGKQWVRIKEGIELLDTPGI LWPKFESETVGVNLAISGAIRDEILPIEDVACSLIRKMLKQGRWTSLKDRYKLLEEDRDD EIMENILSKIALRMAMLNKGGELNVLQAAYTLLRDYRAAKLGKFGLDEIKEV >gi|292606584|gb|ADGG01000026.1| GENE 25 18582 - 19280 891 232 aa, chain - ## HITS:1 COG:FN1204 KEGG:ns NR:ns ## COG: FN1204 COG0313 # Protein_GI_number: 19704539 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Fusobacterium nucleatum # 1 232 1 235 235 412 94.0 1e-115 MLYIVATPIGNLEDMTFRAIRTLKEVDYIFAEDTRVTRKLLDHYEIKNTVYRYDEHTKQH QVANIINLLKEEKNIALVTDAGTPCISDPGYEVVDEAHKNNIKVVAIPGASALTASASIA GISMRRFCFEGFLPKKKGRQTLLKQLAEEKERTIVIYESPFRIEKTLRDIETFMGKREVV IVREITKIYEEVLRGSTTELIEKLEKNPIKGEIVLLVEGQQKGGNKYVNDTD >gi|292606584|gb|ADGG01000026.1| GENE 26 19291 - 20637 1699 448 aa, chain - ## HITS:1 COG:FN1205 KEGG:ns NR:ns ## COG: FN1205 COG0793 # Protein_GI_number: 19704540 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Fusobacterium nucleatum # 13 441 1 426 427 676 89.0 0 MKVSLRKAAMVLMIAISGLSFSDDDRTGFLSNMRELKEISDIMDVIQDSYVENANAHKNK EEKNKKTPQDAQKSTKVTKKSLMQGALKGMLESLDDPHSVYFTREELRSFQEDIKGKYVG VGMVIQKKVGEPLTVVSPIEDGPAYKAGIKPKDQIVEIDGESTYNLTSEEASKRLKGKAN TSVKVKVYREANKLTKVFELKRETIELKYVKSKMLEGGIGYLRLTQFGDNVYPDMKKALE GLQAKGMKALILDLRSNPGGELGQSIKIASMFIEKGKIVSTRQKKGEETVYSREGKYFGN FPMVVLINGGSASASEIVSGALKDYKRATLMGEKTFGKGSVQTLLPLPDGDGIKITIAKY YTPNGISIDGTGIEPDKKVEDKDYYLISDGTITNIDENQQKENKKEIIKEVKGEKAAKEV DTHKDIQLEAAIKFLNTPTQKNTPSPKK >gi|292606584|gb|ADGG01000026.1| GENE 27 20638 - 21426 901 262 aa, chain - ## HITS:1 COG:FN1206 KEGG:ns NR:ns ## COG: FN1206 COG1189 # Protein_GI_number: 19704541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Fusobacterium nucleatum # 1 257 9 266 266 321 75.0 9e-88 MRLDEYLCENEYFEDLEVTKKQIMAGNVIINEQKMDKPGIIISLDKIKTVRIKEKNIPYV SRGGLKLKKAIDVFDLNFKDKIVLDIGASTGGFTDCSLQNGAKLVYAVDVGTNQLDWKLR NHNQVVSIENKHINDLEKSEIKDEIDIIVMDISFISIKKVLYKIKEFLSENSYAVFLIKP QFEAEKEYIDKGIVKDLEIHKKIIIDVIEDAKKYDLFLENLTISPIKGTKGNTEYLAKFS KKNNFSDKEIENMINNNIREEK >gi|292606584|gb|ADGG01000026.1| GENE 28 21413 - 22252 939 279 aa, chain - ## HITS:1 COG:FN1207 KEGG:ns NR:ns ## COG: FN1207 COG3481 # Protein_GI_number: 19704542 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Fusobacterium nucleatum # 1 274 1 274 274 431 85.0 1e-120 MEEKNNKSKKFIDCLLNFQDVKDLELCDDQGVKVSTHTYDVLNISINKIKEKYVDYEFAS QKIDFFAITVGIIIHDISKSSLRRNEENFSHSQMMIKNPEYIKAEVYSVLELIEKESGYK LIDSVKQNIAHIVESHHGKWGKVQPETEEANLVYMADMESAKYHRINPIQANDILKYSAK GLGLSDIEKKLNCSAAVIKDRIKRAKKELNLRTFSELLDVYKEKGRVPIGDKFFVLRSEE TKKLKKYVDKNGFYNLFMKNPLMEYMIDDKIFKKENEIR >gi|292606584|gb|ADGG01000026.1| GENE 29 22236 - 24038 1932 600 aa, chain - ## HITS:1 COG:FN1208 KEGG:ns NR:ns ## COG: FN1208 COG1154 # Protein_GI_number: 19704543 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Fusobacterium nucleatum # 1 600 1 600 600 1034 85.0 0 MSTELTEKCKEIRKQLIEVVSKNGGHLGPNLGVVELTVCLDEVFNFKEDIVLFDVGHQAY VYKILTDRDDKFHTIRTRGGLSPFLDPSESTYDHFISGHAGTALAAGVGFATANPDKKVV IIVGDASISNGHSLEALNYIGYKKLDNILVIVNDNDMSIGENVGFISKFLKKVISSGKYQ NFREDVKSFINRIKANRLKNTLERMERSLKGYVTPFYALESLGFRFFSVSEGNNIEKLLP MLRKVKDLKGPIILLVKTEKGKGYCFAEENKEKFHGIAPFNIETGNTYKNSVSYSEIFGN KIVNLAREDKEIYTLSAAMIKGTGLDKFLKEFPDRCIDTGIAEGFAVTFSAGLARSQKKP YVCIYSTFIQRAISQLIHDISIQNLPVRFVIDRSGIVGEDGKTHNGIYDLSFFLTIQNFT VLCPTTAKELEEALELSKDFNSGPLVIRIPRDSVFNIEDDKPLEIGRWKEIKKGSKNLFI ATGTMLKIILEIHEELKNRGIDATIVSAASVKPLDENYLLNYIKEYDNIFVLEENYVKNS FATSILEFLNDNGINKLIHRIALDSAIIPHGKRDELLAEERLKGESLIERIEEFVYGRKK >gi|292606584|gb|ADGG01000026.1| GENE 30 24052 - 24351 243 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Anoxybacillus flavithermus WK1] # 1 94 2 95 97 98 47 8e-20 MNSKKRAFLKKKAHNLEAIVRIGKDGLNQNIIQSILDAIESRELIKVKILQNCEEEKTVI YSKLMDNKDFEVVGMIGRTIIIFKENKEHPTISLEWKNI >gi|292606584|gb|ADGG01000026.1| GENE 31 24360 - 26276 2407 638 aa, chain - ## HITS:1 COG:FN1210 KEGG:ns NR:ns ## COG: FN1210 COG0595 # Protein_GI_number: 19704545 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Fusobacterium nucleatum # 26 636 2 608 608 1013 89.0 0 MKKEKSKQQVVQVKEKKTSIKERLKSIKDDVLSLKAKKTKAKDENKNEKPKKKKEVKTVK VTEITQVVETKVKKSKKSKNDLEKMYVIPLGGLEEVGKNCTIVQYKDEIIIIDAGAIFPD ENLPGIDLVIPDYSFLENNKSKIKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNA LIKSKFENFGVKKDLPKMIEVGSRSKISVGKYFTVEFVKVTHSIADSYSLSIKTPAGHVF ITGDFKIDLTPVDNEKVDFVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEF QKATGRIVVAVFASHVHRIQQIIDNAAYFGRKIAIDGRSLLKVFEIAPSVGRLNIPKNLL IPISAVEQFQDDEVVILCTGTQGEPLAALSRIAKNMHKHIMLREGDTVIISSTPIPGNEK AVSTNINNILRYDVDLVFKKLAGIHVSGHGSKEEQKLMLNLINPKNFMPVHGEYRMLKAH MKSAIETGVPKDKILITQNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQ QLSEDGIVIVAYSIDKQTGKILSGPEMSTKGFVYYKDSEDTMKEAQDLLLKKIRKEETYL GRDWQDLKGDVRDLLSRFFYEKLKRNPIIVPMLLEIES >gi|292606584|gb|ADGG01000026.1| GENE 32 26221 - 28194 2152 657 aa, chain - ## HITS:1 COG:FN1211 KEGG:ns NR:ns ## COG: FN1211 COG0768 # Protein_GI_number: 19704546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Fusobacterium nucleatum # 1 631 1 630 657 1038 88.0 0 MKLNKYRDNDVILGDKKNTREIWFKVIVFLCFFVLFLRLLYLQVLQGNEFSYLAERNQYK LIKIDSPRGKILDSKGKLVVTNGTGYRLIYSLGREEKEEYIREIAKLTDKTEEVVRKRIK YGEIFPYTKDNVLFEDLEEEKAHKLMEIINNYPYLEVQVYSKRKYLYDKVASHTIGYVKK ISEKEYENLKEAGYTPRDMIGKLGIEKTYDDLLRGRNGFKYIEVNALNKIEREVEKVKSP IVGKNLYMGINMELQQYMEEEFEKDGRSGSFVALNPKTGEIITIVSYPTYSLNTFSSQIS PEEWNRISNDPRKILTNKTIAGEYPPGSTFKMISAMAFLKSGIDPKLIYNDYNGYYQIGN WKWRAWKRGGHGPTDMKKSLVESANTYYYKFSDQIGYAPIVKVARDFSLGQKSGIDIPGE KTGIIPDPDWKKKRTKTVWFRGDTILLSIGQGFTLVTPIQLAKAYTFLANKGWAYEPHVV SRIEDVQTGKTETVVTQKTVLTDYPTSFYETINDALIATVDQNNGTTKIMKNPYVKVAAK SGSAQNPHSKLTHAWVAGYFPADTEPEIVFVCLLEGAGGGGVMAGGMAKRFLDKYLEIEK GIEVVKKTPQTETKQTNTSTTQRNVNNNSSEQGRGEEIVNEEREIETTSSTSEGEEN >gi|292606584|gb|ADGG01000026.1| GENE 33 28184 - 28540 74 118 aa, chain - ## HITS:1 COG:no KEGG:FN1212 NR:ns ## KEGG: FN1212 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 117 24 139 140 113 64.0 2e-24 MGVILPFLSFVVGKRRSAFFIFLAWILYSLQTDKYSYNFLILVLFSIVNFFLFHYVEYNK KSILYLVPLDVGFYMLVVLKSIVSNELDIVYLVINIISFFIFNYFYSSRKNKRKVDET >gi|292606584|gb|ADGG01000026.1| GENE 34 28617 - 29597 1519 326 aa, chain - ## HITS:1 COG:no KEGG:FN1213 NR:ns ## KEGG: FN1213 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 326 11 327 327 456 80.0 1e-127 MGAKKGKKKGRATEIVILLIVILSVLLFFNFRGNNIKLSKDEKVLIIGKQNLFAIYEDRL AVKIPYELYIDSEETVEDLVSTRNYEQVLEKINSIVPEKLTRYIVIKSGEIKLDVENQRN IPETNIGDKRFILTSSVYAMFKELYHEKNSVDEQNENILVDVLNANGVGGYARKTGELIK TSLGMKYNAANYETTQDQSYVILNDISKEKAAEILEKLPEKYFKIKTKSSIPTLANIVVI IGSEKDINFKIDIYGTDSVLKDATDKVKKIGYTNVSTSVAKEGTEQSVIEYNKEDYFVAL RVAKELGITDMIENNDLVNKIGVTIK >gi|292606584|gb|ADGG01000026.1| GENE 35 29587 - 30906 389 439 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229207303|ref|ZP_04333755.1| SSU ribosomal protein S12P methylthiotransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] # 1 399 1 432 480 154 25 9e-37 MSFSKKVAFHTLGCKVNQYETESIKNQLIKRGYEEVPFEDKSDIYIINSCTVTSIADRKT RNMLRRAKKINPEAKVIVTGCYAQTNSREILEIEDVDFVIDNKNKSNIVNFVGAIEDISF EREKNGNIFQEKEYQEYEFATLREMTRAYVKIQDGCNHFCSYCKIPFARGKSRSRKKENI LKEIEKLVEDGFKEVILIGIDLSAYGEDFEKKDSFESLLEDILKIKDLKRVRIGSVYPDK ISDKFIDLFKNKNLMPHLHISLQSCDDTVLKNMRRNYGSSLIRESLLKLKSKVKNMEFTA DVIVGFPKEDDSMFQNTRNVIKEIEFSGLHIFQYSDREGTIASNMDSKVDAKTKKQRADS LDQLKQEMILESREKYLGEVLEVLVEEEKEGEYFGYSQNYLRVKFKSEEKNLINELINIK IKSIENDILIGEKEKFYGS >gi|292606584|gb|ADGG01000026.1| GENE 36 30893 - 31600 741 235 aa, chain - ## HITS:1 COG:FN1215 KEGG:ns NR:ns ## COG: FN1215 COG1385 # Protein_GI_number: 19704550 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 235 1 235 235 344 86.0 8e-95 MLSVLVTEVYDEYILVIDANDINHIKNVFRKEKGDIVRAVDGSNEYLCEIEEINDKEIKL KIIEKKADKFSLDIELDAGISILKGDKMDLTIQKLTELGINKIIPIAVKRCVVKLDKKKD RWDTIAKEALKQCQGVVPTVVDEIKKIDKLNLKDYDLVLVPYENEEEIFLKDILRNLKVK PSKILYIIGAEGGFEKEEIDFLKSQGAKIISLGKRILRAETAAIVTGGVIINEFF >gi|292606584|gb|ADGG01000026.1| GENE 37 31610 - 32035 619 141 aa, chain - ## HITS:1 COG:FN1216 KEGG:ns NR:ns ## COG: FN1216 COG1959 # Protein_GI_number: 19704551 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 141 1 141 143 227 83.0 6e-60 MKINTKVRYGLKALAYIAENSSDKKLVRIKEISEDQDISIQYLEQILFKLKNENIIEGKR GPTGGYKLTLKPNQINLYTIYKILDDEERVIDCNENAEGKAHNCNEEACGETCIWSRLDN AMTKILSETSLEDFIKNGKKI >gi|292606584|gb|ADGG01000026.1| GENE 38 32013 - 33002 1225 329 aa, chain - ## HITS:1 COG:FN1217 KEGG:ns NR:ns ## COG: FN1217 COG2255 # Protein_GI_number: 19704552 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Fusobacterium nucleatum # 1 322 10 331 332 575 95.0 1e-164 MPNEIEIQKSLRPKSFDEYIGQENLKEKMNISIKAAQKRNMTVDHILLYGPPGLGKTTLA GVIANEMQANLKITSGPILEKAGDLAAILTSLEENDILFIDEIHRLNNTVEEILYPAMED GELDIIIGKGPSAKSIRIELPPFTLIGATTRAGLLSAPLRDRFGVSHKMEYYNIDEIRAI IIRGAKILGVKISEEGAIEISKRSRGTPRIANRLLKRVRDYCEIKGNGTIDVVSAKNALD MLGVDSSGLDELDRNIINSIIENYDGGPVGIETLSLLLGEDRRTLEEVYEPYLVKIGFLK RTNRGRVVTPKAYQHFKKDEVKNEDKHEG >gi|292606584|gb|ADGG01000026.1| GENE 39 33040 - 33639 734 199 aa, chain - ## HITS:1 COG:FN1218 KEGG:ns NR:ns ## COG: FN1218 COG4399 # Protein_GI_number: 19704553 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 2 198 3 199 200 277 80.0 1e-74 MKLVIMVIISAAIGWITNWVAIKMLFRPHNEINLGLFKIQGLIPKRRAEIGIGIADVIQN ELISIKDVIANIDREEFSKRLNDLIDDVLEKNLKTKVKEKFPVMQIFFSDKIAKDVSNTI KGIVMENQEKIFEIFSNYAEENIDFSTIITDKISNFSLDKLEEIINGLAKKELKHIEVIG AILGAFIGLVQYFITLFVK >gi|292606584|gb|ADGG01000026.1| GENE 40 33832 - 34287 601 151 aa, chain + ## HITS:1 COG:no KEGG:FN1219 NR:ns ## KEGG: FN1219 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 151 1 151 151 233 87.0 1e-60 MSTLYIKILTDYFHYIIGDLEENRKNFLGKFYSYLLEKDEYGFAPVFEGELERIEYLLKQ ISIEAKGMSLDEFLKLMSWYNEDAWANGEIFEYFLHHKKEKEIKLITDIHSLSDKEIQFI KDLDSFLNTKGRILKFFNVHNGKYQNLKEIL >gi|292606584|gb|ADGG01000026.1| GENE 41 34450 - 35370 653 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 303 5 302 308 256 47 2e-67 MLANSVIDLIGNTPLVKINNIDTFGNEIYIKLEGSNPGRSTKDRIALKMIEEAEKEGLID KDTVIIEATSGNTGIGLAMICAIKNYKLKIVMPNTMSVERIQLMRAYGTEVILTDGSLGM KACLDKLEELKKEEKKYFIPNQFTNPNNPKAHYENTAEEILKDMDNRVDVYICGTGTGGS FSGTAKKLKEKLPNIKTFPVEPASSPLLSKGYIGPHKIQGMGMSIGGIPVVYDGSLADGI LVCDDEDAFKMMRELSFKEGILAGISSGATFKAALDYSKENANKGLRIVVLSTDSGEKYL SNAYNY >gi|292606584|gb|ADGG01000026.1| GENE 42 35498 - 36244 898 248 aa, chain + ## HITS:1 COG:FN0725 KEGG:ns NR:ns ## COG: FN0725 COG1179 # Protein_GI_number: 19704060 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Fusobacterium nucleatum # 15 248 1 234 234 388 87.0 1e-108 MLLFSKLVNNQGEHMFLQRTELLIGSDNLEKLKNSNVIVFGLGGVGGAAVESLVRAGIGN LSIVDFDTVDKTNLNRQIITTQSTIGRAKVEVAKERILAINPEINLTVYHEKFLKENIDL FFKDKKYDYIVDAIDLVTAKLDLIEFATKSKTPIISCMGTGNKLDPSRFQVADIKKTSVC PLAKVIRKELKNRRINKLKVVYSDEVPRKPLNLDGGREKFKNVGSISFVPPVAGMLLASA VIKDICEL >gi|292606584|gb|ADGG01000026.1| GENE 43 36258 - 36761 721 167 aa, chain + ## HITS:1 COG:FN0724 KEGG:ns NR:ns ## COG: FN0724 COG0716 # Protein_GI_number: 19704059 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 167 1 167 167 273 89.0 2e-73 MKTIGIFYATLTKTTVGVVDELEFFLKHDDFKTFNIKSAVKEIENYENLIFVTPTYQVGE AHAAWMNNLKKLEEIDFTGKVVGLVGLGNQFAFGESFCGGIRHLYDVIVKKGAKVVGFTS TDGYHYEETSIIEDGKFIGLALDEENQANLTPKRIENWIAEVKKEFK >gi|292606584|gb|ADGG01000026.1| GENE 44 36922 - 38109 1581 395 aa, chain - ## HITS:1 COG:FN0625 KEGG:ns NR:ns ## COG: FN0625 COG1168 # Protein_GI_number: 19703960 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Fusobacterium nucleatum # 1 395 1 395 398 668 88.0 0 MQKEKFLKEYLVERKGTYSLKWDALDKRFGNADLISMWVADMEIKAPKEVIEALKERCEH GVFGYSYVSDEYYNSVINWLKEKHNYEIKKEWLRFTNGVVTAIYCFVNIFTKVDDAILIL TPVYYPFHNAVKDNNRKLITYDLKNTDGYFTIDYEEVEKKIVENKVKLFIQCSPHNPAGR VWKEEELAKILEICKKYNVLVISDEIHQDITMKGYKHIPSAIVANGKYADNLITVSAASK TFNLAGLIHSNIIISNDELRKKYDEEIKKINQTEINILGMLATQVAYEKGSEWLENVKEI IEDNFNYLKTELNKHIPEITITNLEGTYLVFLDLRKIIPIDKVKEFIQDKCNLAIDFGEW FGASFKGFIRINLATDPEIVKKAVESIIFEYKKLK >gi|292606584|gb|ADGG01000026.1| GENE 45 38192 - 39166 1467 324 aa, chain - ## HITS:1 COG:CAC1515 KEGG:ns NR:ns ## COG: CAC1515 COG2221 # Protein_GI_number: 15894793 # Func_class: C Energy production and conversion # Function: Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits # Organism: Clostridium acetobutylicum # 4 322 2 320 320 438 62.0 1e-123 MIRDLNIRKVMKNAFRITKTKYKTALRVRVPGGLIDPECLMLVSEIASKYGDGQVHITTR QGFEILGIDMEDMPAVNEMAQPLIDKLNINQDEKGKGYSAAGTRNVSACIGNKVCPKAQY NTTAFAKRIEKVIFPNDLHVKVALTGCPNDCIKARMHDFGIIGTCLPEYEMDRCVTCGAC VKKCKKVSVEALRIENNKIVRDENKCIGCGECVINCPMSAWTRSPKKYYKLMIMGRTGKQ NPRLAEDWLRWVDEDSIVKIIENTYKYAKEFISKDAPNGKEHVGYIVDRTGFKVFREWAL KDVNLPKETIEREPIYWSGPKYNY >gi|292606584|gb|ADGG01000026.1| GENE 46 39186 - 39989 1060 267 aa, chain - ## HITS:1 COG:CAC1514 KEGG:ns NR:ns ## COG: CAC1514 COG0543 # Protein_GI_number: 15894792 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 6 267 4 264 264 323 56.0 2e-88 MCNCDNPYIPCPAEIIEITKHTDIEWTFRVKADTSKTKPGQFYEISLPKFGESPISVSGI GPNFIDFTIRAVGRVTNEIFEYKIGDKLFIRGPYGNGFDLNEYVGKDLVIVVGGSALAPV RGIIQFVYNNPEKVKSFKLIAGFKSPKDVLFAKDLEEWSQKLDVVLTVDGAEEGYKGNIG LVTKYIPELKFNDLSNVSAVVVGPPMMMKFSVAEFLKLNVAEKNIWVSYERNMHCGIGKC GHCKMDATYICLDGPVFDYEFAKNLVD >gi|292606584|gb|ADGG01000026.1| GENE 47 39993 - 41060 1594 355 aa, chain - ## HITS:1 COG:CAC1513 KEGG:ns NR:ns ## COG: CAC1513 COG1145 # Protein_GI_number: 15894791 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 1 336 1 338 338 344 50.0 2e-94 MKLRLSVEEFDKGLEELSKKYLILAPRTFEKRGTYSDTDVVRYAKVSSFSEMNWEDKSHF PAKEALLPVNEVLFYFTEDEYKVAAEDTRERLVFLRACDMNAVKRIDQIYLGNGASNDFF YTRTRKRTKFVVVGCTKSFRNCFCVSMGTNKADNYDAAMNIRGNEIQLELRDDDLKVFSG REVDFDIDYVSKNDFEVELPDKVDFMYMQNHKMWDEYDTRCIACGRCNYSCPTCTCFSMQ DIHYKENKNMGERRRVWASCQVDGYTNIAGGHSFRVKHGQRMRFKTLHKIHDYRKRFGEN MCVGCGRCDDMCPQYISISEAYEKVARAMKEKDNEELISEVYEKVVKAMKEKREE >gi|292606584|gb|ADGG01000026.1| GENE 48 41234 - 41941 923 235 aa, chain - ## HITS:1 COG:CAC1511 KEGG:ns NR:ns ## COG: CAC1511 COG0664 # Protein_GI_number: 15894789 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 15 234 8 226 228 134 37.0 2e-31 MSEGDIMKAKNSDIEKIEVFSGISKNSIVEIKNSADVIELKKNKALYSDRQQLDYVYFLI SGNVSLIKSSESGENRVVFLLNDGSMINEPLMRKNTSGIECWGFEDSKILRIGLKTFDKI MSKDYILARNCMLEMEKRIRRLYRQLKNLTSSNIEKKLAAKLYRLGTQYGLKENEIEDYT YINLNLTVTYIAKMLGYQRETVSRSLKLLAQKEIILQKDRKFYVNIEKARQFFKK >gi|292606584|gb|ADGG01000026.1| GENE 49 42055 - 43422 1187 455 aa, chain + ## HITS:1 COG:FN0944 KEGG:ns NR:ns ## COG: FN0944 COG0534 # Protein_GI_number: 19704279 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 455 1 455 455 694 88.0 0 MDEEIKTVNPLGYQKISKLLRSLAIPAIIANLVNALYNVVDQIFIGQGIGYLGNAATNIA FPITTICLAIGLTLGIGGASNFNLELGKGNPEKSKHTAGTAASTLIIIGIILCISIRIFL EPLMISFGATDKILQYAMEYTGITSYGIPFLLFSIGVNPLVRADGNARYSMMAIITGAVL NTILDPLFMFVFHWGIAGAAWATVISQVVSASLLLIYFPRFKSVKFSLNDFIPQVHYLKR IISLGFASFIYQFSNMIVLVTTNNLLKFYGAKSIYGSDIPIAVFGIVMKINVIFIAIVLG LVQGAQPIFGFNYGAKNYHRVRETMRLLLKVTFCIASILFVIFQVFPKQIISLFGEGDEL YFSFATRYMRIFLLFISLNSIQVSIATFFPSIGKAIKGAIVSLAKQILFLFPLLLILPRF FGLEGVIYATPVTDLLAFCVAIIFLIHEFKHMPKE >gi|292606584|gb|ADGG01000026.1| GENE 50 43448 - 44521 1195 357 aa, chain - ## HITS:1 COG:FN0934 KEGG:ns NR:ns ## COG: FN0934 COG0082 # Protein_GI_number: 19704269 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Fusobacterium nucleatum # 1 357 1 357 357 624 87.0 1e-178 MNTWGTKIRLSIFGESHGEALGIVIDGLEAGTKLNLENINKFIDRRRAGKSSFTTSRKEK DEFRILSGYKDGHTTGAPLCVIFENTNTQSKDYENLKALLRPNHADYPAAIKFEGFNDIR GGGHFSGRITLALTFAGAVAMDILEEKGIKIFSHIKKVLDIKDKSFLEFKEVDIDKFKNL KESSLAFIEDDLEIKAKELLEKIKLSGNSVGGEIECACYNLPVGLGSPFFDSLESKISHL AFSVPAVKGIQFGIGFDFSNILGSEANDLYYLDNNQIKTRTNNNGGILGGLSTGMPLVFS VVIKPTPSISIKQETVNIKEMKNDILKISGRHDACIVPRVMPVIEAITALAILDEIL >gi|292606584|gb|ADGG01000026.1| GENE 51 44502 - 45758 1277 418 aa, chain - ## HITS:1 COG:FN0933 KEGG:ns NR:ns ## COG: FN0933 COG0128 # Protein_GI_number: 19704268 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Fusobacterium nucleatum # 2 417 7 424 424 621 80.0 1e-178 MKIIKADKLVGELSPPPSKSVLHRYIIASSLAKGISKIENISFSEDIIATIEAMKKLGAK IEQKENYLLIDGSDTFKKLNENIEIDCNESGSTLRFLFPLSIVKENKVLFKGRGKLFKRP MTPYFKNFGKHKIKYSYIDENKILLEGQLKAGIYKIDGNISSQFITGLLFSLPLLDGKSK IIINGKLESSNYIDISLDCLSKFGIKIINNSYQEFIIEGNQSYRAGNYRTEADYSQAAFF LVANAIGSNIKINDLSENSLQGDKKIIDYISEIDNWNSKDTLVLDGSETPDIIPILSLKA AVSGKKIEIVNVERLRIKESDRLKATVEELSKLNFDLIEKKDSILINSREALKANKNEKI VSLSAYSDHRIAMMIAIAATCYDGEILLDNLDCVKKSYPNFWEVFLSLGGKIYEYLGN >gi|292606584|gb|ADGG01000026.1| GENE 52 45770 - 46255 601 161 aa, chain - ## HITS:1 COG:no KEGG:FN0932 NR:ns ## KEGG: FN0932 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 161 7 167 167 184 72.0 8e-46 MLFYEDLVKKIETGKIEDIKKIEKFGLNKAKNISGYGIAIPLILIGLFEVYSYTIYHKWY LLLIGALFFALGLKQAKTVFTYSIKVDTEARNIKFKNLNLNFDDVESGTLKEMKLGKKVL PVIDMITKDRKQVIIPLYMNKQERFILLVKELLIGRFSIEK >gi|292606584|gb|ADGG01000026.1| GENE 53 46821 - 47117 122 98 aa, chain + ## HITS:1 COG:pli0034 KEGG:ns NR:ns ## COG: pli0034 COG0640 # Protein_GI_number: 18450316 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 95 1 95 97 97 47.0 8e-21 MNTIDIALICKALGDSNRLQIIQMLSDGEKCGCKILEAFEITQPTLSHHMKILNECGLVN YWKEGRWHHYSLNCETLNTFKTFIEGLSCYKEESGGSQ >gi|292606584|gb|ADGG01000026.1| GENE 54 47114 - 48115 1233 333 aa, chain + ## HITS:1 COG:MTH894 KEGG:ns NR:ns ## COG: MTH894 COG0701 # Protein_GI_number: 15678914 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 29 328 20 326 327 265 44.0 7e-71 MMIWDFIQNQILGMKWMNTLIGNLLEKAGVDTSGRIGGSVQFFLYDVLKITILLCILIFM ISYIQSYFPPERSKKLIGRFHGVWANCIAALLGTVTPFCSCSSIPLFIGFTSAGLPLGVT FSFLISSPMVDLGSLVLLMSIFGSKVAIIYVIVGLVIAVIGGTIIEKLGLENEVEEFVRK ANAVDIDMDEPTQKERISFAKQQVIDTFKKVFPYILIGVGIGAVIHNWIPKSWVEKILGN NNPFGVILATLVGIPMYGDIFGTIPVAEALLAKGAQLGTILSFMMAVTTLSLPSIIMLRK AVKPKLIWIFIVICAIGIVIVGYFFNKIQYLLV >gi|292606584|gb|ADGG01000026.1| GENE 55 48146 - 48511 614 121 aa, chain + ## HITS:1 COG:asl1510 KEGG:ns NR:ns ## COG: asl1510 COG0526 # Protein_GI_number: 17229003 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Nostoc sp. PCC 7120 # 44 118 6 80 80 70 48.0 5e-13 MSLFRKKKEEKEMVKEQSNCTCVGTCNEENVEAVKETLSSGASVKVLGSGCDKCNALEKN VKEALSELGMTDEVDHVTDFAQIAAMGVMSTPALAIDNKVVSMGKVLGKDEVIKALKKIR G >gi|292606584|gb|ADGG01000026.1| GENE 56 48918 - 49205 501 95 aa, chain - ## HITS:1 COG:no KEGG:FN0038 NR:ns ## KEGG: FN0038 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 95 6 100 100 115 88.0 7e-25 MNATEKKELMGKYAKKLENAIKREATVMKEIENDKALIKYLEGQKTSGAAFDNTVYENYD AWIETIRKQIKKSESTLTNIEFKKVELEAIQKYIA Prediction of potential genes in microbial genomes Time: Thu May 19 21:46:05 2011 Seq name: gi|292606583|gb|ADGG01000027.1| Fusobacterium sp. 1_1_41FAA cont1.27, whole genome shotgun sequence Length of sequence - 29146 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 11, operones - 8 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 191 - 787 786 ## gi|294782611|ref|ZP_06747937.1| conserved hypothetical protein - Prom 833 - 892 6.4 - Term 873 - 912 4.3 2 2 Tu 1 . - CDS 930 - 1658 1092 ## FN0557 hypothetical protein - Prom 1690 - 1749 14.7 + Prom 1654 - 1713 13.8 3 3 Op 1 . + CDS 1787 - 2251 643 ## COG3467 Predicted flavin-nucleotide-binding protein 4 3 Op 2 . + CDS 2328 - 3044 1211 ## FN0558 TraT complement resistance protein precursor 5 3 Op 3 . + CDS 3074 - 3796 799 ## FN0558 TraT complement resistance protein precursor 6 3 Op 4 1/0.000 + CDS 3826 - 5514 2573 ## COG1109 Phosphomannomutase 7 3 Op 5 2/0.000 + CDS 5498 - 6601 1249 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 8 3 Op 6 14/0.000 + CDS 6623 - 7294 926 ## COG0325 Predicted enzyme with a TIM-barrel fold 9 3 Op 7 1/0.000 + CDS 7316 - 7765 764 ## COG1799 Uncharacterized protein conserved in bacteria 10 3 Op 8 . + CDS 7749 - 8753 1268 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain + Term 8756 - 8798 7.1 - Term 8744 - 8786 7.1 11 4 Op 1 7/0.000 - CDS 8787 - 9626 1459 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 12 4 Op 2 . - CDS 9642 - 10418 1168 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 10504 - 10563 11.8 + Prom 10484 - 10543 8.7 13 5 Tu 1 . + CDS 10719 - 13307 3069 ## COG0474 Cation transport ATPase + Term 13315 - 13366 12.1 - Term 13299 - 13357 12.2 14 6 Op 1 . - CDS 13382 - 13531 146 ## gi|294782624|ref|ZP_06747950.1| hypothetical protein HMPREF0400_00602 - Prom 13562 - 13621 9.8 15 6 Op 2 . - CDS 13635 - 13964 469 ## FN0737 hypothetical protein - Prom 13996 - 14055 10.2 - Term 14023 - 14066 5.4 16 7 Op 1 . - CDS 14079 - 14318 335 ## gi|294782626|ref|ZP_06747952.1| pupal cuticle protein Edg-91 (Ecdysone-dependent protein91) 17 7 Op 2 1/0.000 - CDS 14390 - 15973 1850 ## COG2509 Uncharacterized FAD-dependent dehydrogenases 18 7 Op 3 1/0.000 - CDS 15980 - 16951 1265 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Prom 17092 - 17151 7.2 19 7 Op 4 1/0.000 - CDS 17162 - 17704 810 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 20 7 Op 5 1/0.000 - CDS 17697 - 18284 848 ## COG1573 Uracil-DNA glycosylase 21 7 Op 6 . - CDS 18299 - 19078 1039 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 22 7 Op 7 . - CDS 19084 - 19800 739 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Prom 19891 - 19950 5.6 23 8 Op 1 . - CDS 19972 - 21834 1649 ## COG1533 DNA repair photolyase 24 8 Op 2 . - CDS 21852 - 22079 396 ## gi|294782634|ref|ZP_06747960.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein 25 8 Op 3 . - CDS 22151 - 22819 261 ## PROTEIN SUPPORTED gi|241889384|ref|ZP_04776685.1| 30S ribosomal protein S8 - Prom 22954 - 23013 8.9 + Prom 22773 - 22832 15.2 26 9 Op 1 . + CDS 22922 - 24229 1297 ## Lebu_0718 hypothetical protein 27 9 Op 2 . + CDS 24222 - 25805 1627 ## GYMC10_2788 hypothetical protein 28 9 Op 3 . + CDS 25829 - 26734 1053 ## FN0895 hypothetical protein + Term 26783 - 26821 -0.9 29 10 Op 1 . + CDS 26838 - 27221 392 ## FN0896 hypothetical protein 30 10 Op 2 . + CDS 27239 - 27367 101 ## gi|237740261|ref|ZP_04570742.1| conserved hypothetical protein + Term 27594 - 27645 1.2 + Prom 27622 - 27681 12.9 31 11 Op 1 . + CDS 27764 - 28909 1054 ## COG0675 Transposase and inactivated derivatives 32 11 Op 2 . + CDS 28955 - 29131 95 ## gi|294782641|ref|ZP_06747967.1| hypothetical protein HMPREF0400_00620 Predicted protein(s) >gi|292606583|gb|ADGG01000027.1| GENE 1 191 - 787 786 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782611|ref|ZP_06747937.1| ## NR: gi|294782611|ref|ZP_06747937.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 198 11 208 208 327 100.0 3e-88 MEYRYKNIYLEETIEEIFPKLNNSNTEYERSTFSLAYRPYEYVEVTIYLKFGEVLLIKIF DENFQIDNTLKVGIALTDEIINRYDLYYDDFEEVYLSKKYKELVVIVDLADNIIGFSFAK EDGKDFSFPKDKIKNYLECKNLLDIYGSLRNNKTLDADIEKREIYGQLDNYKFTFDLVTR DIKSIQNLETGEFVKTYN >gi|292606583|gb|ADGG01000027.1| GENE 2 930 - 1658 1092 242 aa, chain - ## HITS:1 COG:no KEGG:FN0557 NR:ns ## KEGG: FN0557 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 242 3 244 244 348 80.0 1e-94 MKFLMALLVTVFAFSFSAEIQAKSVSKNKEVVDVIFILDRSGSMGGLESDTIGGFNSVLE KQRKEEGKAYITTVLFDDQYELLHDRVDITKVQNITEKEYYVRGSTALLDAIGKTIAKEK AIQDTLSKGEKATKVLFIIITDGLENASKEYNSATVKRLIETQKEKYGWEFLFLGANIDA IETASAIGISAERAVNYNSDSVGTQLNYKSLNNAVSEVRSGKELKKEWKADIEADYQQRN KK >gi|292606583|gb|ADGG01000027.1| GENE 3 1787 - 2251 643 154 aa, chain + ## HITS:1 COG:FN1023 KEGG:ns NR:ns ## COG: FN1023 COG3467 # Protein_GI_number: 19704358 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Fusobacterium nucleatum # 1 154 3 156 156 224 73.0 6e-59 MRKANREVKDRNEIIEIMKRCDVCRLVFNNGDYPYIVPLNFGLDADEEKVIIYFHSALEG TKVDIMKREMKATFEMDCNHELQYYEDRGYCTMAYESVIGRGKIRILSEEEKMEALKKLM AQYHKDKEAYFNPAAIPRTLVYCLEVEEMTAKRK >gi|292606583|gb|ADGG01000027.1| GENE 4 2328 - 3044 1211 238 aa, chain + ## HITS:1 COG:no KEGG:FN0558 NR:ns ## KEGG: FN0558 # Name: not_defined # Def: TraT complement resistance protein precursor # Organism: F.nucleatum # Pathway: not_defined # 23 238 1 216 216 330 87.0 3e-89 MKKFWKSIIFLGLLLTMVSCSTMHTVISKRNLDVQTKMSDTIWLEPAAANQKTVFVKVSN TSGKNLNIEQKLINVLSAKGYRIVNDPAEAKYWLQANILKVDKVNLNNENGFSDAVLGAG IGGVLGAQRSGGAYTALGWGLAGAAIGTIADALVSDTAYAMVTDILISEKTGKNVQSSTR NSVKQGNSGTMTSSTSSSSNMEKYSTKVLSTANQVNLNFDSAIPILEDELGKVISGIF >gi|292606583|gb|ADGG01000027.1| GENE 5 3074 - 3796 799 240 aa, chain + ## HITS:1 COG:no KEGG:FN0558 NR:ns ## KEGG: FN0558 # Name: not_defined # Def: TraT complement resistance protein precursor # Organism: F.nucleatum # Pathway: not_defined # 23 240 1 216 216 214 56.0 3e-54 MKKILKTVFILTIILTIVLSSTIHTIISKRNLEVQTKMSNTIWLEPVDTDQKIIFVKISN TSDKDLDIESKVINALKTKGYKIVKEPSEAKYSLQVNILNVEKSNLNDANGSGFSEVFMA AGIGSILATQSPEDRANIVGLGMASATLARISSAFVKDVVYAMITDVLVSEKIGKNVQVT TVNSVSQGILGTRTSTSSETSNIEKYSTRVLSTANKVNLKFENAMPVLEDELVKVITGIF >gi|292606583|gb|ADGG01000027.1| GENE 6 3826 - 5514 2573 562 aa, chain + ## HITS:1 COG:FN0559 KEGG:ns NR:ns ## COG: FN0559 COG1109 # Protein_GI_number: 19703894 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Fusobacterium nucleatum # 1 562 19 580 580 993 90.0 0 MYLDEYKKWLNSTMLSENEKEELKSIANDEKEIENRFYTDLSFGTAGMRGIRGIGKNRMN KYNIRKATQGLANYIIEATGETGKKKGVAIAYDSRLDSVENAINTAMTLAGNGIKVYLFE GIRSTPELSFAVRELKAQSGVMITASHNPKEYNGYKVYWEDGAQIVDPQATAIVSAVEAV DIFNGVKLMDEKEAIEKGLLVYVGEKLDDRFIEEVKKNAINPDVENKDKIKIVYSPLHGV AARPVERILKEMGYTSVYPVKEQEQPDGNFPTCDYANPEDTNVFKLSTELADKVGAEICI ANDPDGDRVGLAVLDNNGKWFFPNGNQIGILFAEYILNHKKDIPANGTMITTVVSTPLFD TIVKNNGKKALRVLTGFKYIGEKIRQFENKDLDGTFLFGFEESIGYLVGTHVRDKDAVVA SMIIAEMATTFKNNGSSIYNEIIKIYEKYGWRLETTIPITKKGKDGLEEIQKIMKSMREK THTEIAGIKVKEYRDYQKGVEDLPKSDVIQIVLEDETYLTVRPSGTEPKIKFYISVVDSD KKVAEEKLAKLEKEFLNYAENL >gi|292606583|gb|ADGG01000027.1| GENE 7 5498 - 6601 1249 367 aa, chain + ## HITS:1 COG:FN0560 KEGG:ns NR:ns ## COG: FN0560 COG0635 # Protein_GI_number: 19703895 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 365 1 365 365 575 83.0 1e-164 MLKIYNTYIHIPFCERKCNYCDFTSLKGTDNQIEKYVNYLLKEIDIYSKNYDLSEKQDTI YFGGGTPSLLPIDSLKRILSKFSYDENTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQ TFNNENLKILGRIHNSEEAIEVYNMAREVGFKNISLDIMFSLPNQTLEMLKIDLEKLILL NPEHISIYSLIWEEGTKFFRDLKAGKLKETDNELEATMYEYIIDYLKSKGYGHYEISNFS KKDFEARHNSIYWENKNYLGLGLSAAGYLGNLRYKNFFHLKDYYDKLDKNVLPVDEKEVL TEADIEQYRYLVGFRLLNNPLIPSKEYLEKCEILEKEAYLVKKENGYILSSKGLMLFNDF IANFIDD >gi|292606583|gb|ADGG01000027.1| GENE 8 6623 - 7294 926 223 aa, chain + ## HITS:1 COG:FN0561 KEGG:ns NR:ns ## COG: FN0561 COG0325 # Protein_GI_number: 19703896 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Fusobacterium nucleatum # 1 223 1 223 223 349 92.0 2e-96 MSIQASVEEILEDIKKYSPYPEKVKLIAVTKYSSVEDIEEFLKTGQNICGENKVQVVKDK IEYFKNKNTDIKWHFIGNLQKNKVKYIIDDVVAIHSVNKLSLAQEINKKAEQSGKTMDVL LEINVYGEESKQGYSLDELKCDIIELKNLKNLNIIGVMTMAPFTDDEKILRMVFSELRKI KDELNKEYFDNNLTELSMGMSNDYKIALQEGSTYIRVGTKIFK >gi|292606583|gb|ADGG01000027.1| GENE 9 7316 - 7765 764 149 aa, chain + ## HITS:1 COG:FN0562 KEGG:ns NR:ns ## COG: FN0562 COG1799 # Protein_GI_number: 19703897 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 39 149 1 111 111 168 89.0 4e-42 MGFIKEIKELVGFNTEEEDYDEEEVVEETKRTVTRREQMEMDTVDDFRYDDYSTIFIDPK QFEDCKKIATYIENEKMITINLENIGPNVAQRIMDFLAGAMEIKNANFAQIAKNVYTIVP ENMKVYYEGKRREKKLIDLEKGEKFEREN >gi|292606583|gb|ADGG01000027.1| GENE 10 7749 - 8753 1268 334 aa, chain + ## HITS:1 COG:FN0563 KEGG:ns NR:ns ## COG: FN0563 COG0482 # Protein_GI_number: 19703898 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 3 334 2 333 333 582 88.0 1e-166 MKEKIKALALFSGGLDSALAIKVVQDQGVEVIGLNFVSHFFGGKNEKAEKMAEQLGIKLE YIDFKKRHMFVVEDPVYGRGKNMNPCIDCHSLMFKIAGELLEEYGAHFVISGEVLGQRPM SQNAQALEKVKKLSGMEDLVLRPLSAKLLPPSKAEIMGWVDREKLLDINGRSRHRQMELM DSYGLVEYPSPGGGCLLTDPGYSSRLKVLEDDGLLKDEHSWLFKLIKEARFFRFSKGRYL FVGRDKESNMKIAEYRKEKNLKFYIHSAEVPGPHLLANVDLSDEEIEFAKNLFSRYSKVK GNEKINLNNSGNIETVDVVDLKKLDEEIKKYQQL >gi|292606583|gb|ADGG01000027.1| GENE 11 8787 - 9626 1459 279 aa, chain - ## HITS:1 COG:FN1019 KEGG:ns NR:ns ## COG: FN1019 COG1250 # Protein_GI_number: 19704354 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Fusobacterium nucleatum # 1 279 1 279 279 502 93.0 1e-142 MKVGIIGAGTMGAGIAQAFAQTEGFTVALCDINNEFAANGKNKIAKGFEKRIAKGKMEQA EADAILGRITTGTKEICADCDLVIEAAIENMEIKKQTFKELDEICKADAIFATNTSSLSI TEIGAGLKRPMIGMHFFNPAPVMKLVEIIAGLHTPTEIVEKIKKISEDIGKVPVQVEEAP GFVVNRILVPMINEAVGIYAEGIASVEGIDAAMKLGANHPIGPLALGDLIGLDVCLAIMD VLYHETGDSKYRAHTLLRKMVRGKQLGQKTGKGFYDYTK >gi|292606583|gb|ADGG01000027.1| GENE 12 9642 - 10418 1168 258 aa, chain - ## HITS:1 COG:FN1020 KEGG:ns NR:ns ## COG: FN1020 COG1024 # Protein_GI_number: 19704355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Fusobacterium nucleatum # 1 258 1 258 258 441 86.0 1e-124 MSVVSYRQEDFIGIVTIERPEALNALNTAVLNELNSTFANINLETTRVVILTGAGTKSFV AGADISEMSHLNNTEAARFSNKGNEVFRKIETFPLPVIAAINGFALGGGCELAMSCDFRV CSENAVFGQPEVGLGITPGFGGTQRLARLIGLGKAKEMIYTANAIKADEALNVGLVNHVY PQETLLEETKKLAAKIAKNAPFAVRASKKAINEGIDTDMDRAIIIEEKLFGSCFTTEDQK VGMKAFLEKIKGVEYKNK >gi|292606583|gb|ADGG01000027.1| GENE 13 10719 - 13307 3069 862 aa, chain + ## HITS:1 COG:FN1022 KEGG:ns NR:ns ## COG: FN1022 COG0474 # Protein_GI_number: 19704357 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 1 862 1 862 862 1452 90.0 0 MKHFTKSKKHLFEEFETSSTGLIEEEVLKRRKKYGENKFVEKEKDGLIKIFFNQFKDSLV IILLIAAIISFFSGNKESALVIVLVLILNSILGAYQTIKAQKSLDSLKKMSSPKCKVIRD HEQLEVDSAELVPGDIVIVEAGDIVPADGRIIENFSLLVNENSLTGESNSIEKTDEVLGY EDLALGDQVNMVFSGSLVNYGRAKILVTETGMNTQLGKIATLLDQTEENVTPLQKSLDIF GKRLTLGIVVLCVLIFGIYVYHGNTVLNSLLLAVALAVAAIPESLNPIITIVLSMETEKL SKENAIVKELKSIEALGSISVICSDKTGTLTQNKMTVKRIFINGKLDNEYSLDKNKKIDK LLLDSFILCTDATDTIGDPTETALIHLTQKYDMSFRDERKDSKRISEIPFDSVRKLMTVL YETKNAKHIIFTKGAFDSLVTRFKYYLDENGNVQNVNEEFIKKIEKVNNELAEEGLRVLT FAYKYIDGEKELSNEDENDYIFHALVGMIDPPREESKLAVQECIRGGIKPVMITGDHKIT ARTIAKNIGIFREGDIALEGVELEKMTDEELEKNVEHISVYARVSPEHKIRIVNAWQKLG KIVAMTGDGVNDAPALKKANIGIAMGITGTEVSKNAASMILADDNFSTIVKAIITGRNVY RNIKNAIGFLLSGNTAAILAVLYSSLANLPVIFSAVQLLFINLLTDSLPSIAVGVEPKNE DILDEKPRDPNEAILTKRFSSKLLIEGVLIAAFIIRAFYIGLKDSPLKGSTMAFATLCLA RLFHGIDYRGQRNVFAIGFFKNKFSLIAFALGFILLNAVLLCPPIYHMFGITKLEPNNFI QIYVLSLIPTVLVQIYKAVKYR >gi|292606583|gb|ADGG01000027.1| GENE 14 13382 - 13531 146 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782624|ref|ZP_06747950.1| ## NR: gi|294782624|ref|ZP_06747950.1| hypothetical protein HMPREF0400_00602 [Fusobacterium sp. 1_1_41FAA] # 1 49 4 52 52 65 100.0 1e-09 MKKLIILTALVSIFSISAIAATYCYGYDYSRGSNNNNYFNNVPSCCSRY >gi|292606583|gb|ADGG01000027.1| GENE 15 13635 - 13964 469 109 aa, chain - ## HITS:1 COG:no KEGG:FN0737 NR:ns ## KEGG: FN0737 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 109 1 109 109 192 91.0 2e-48 MPHLKIRGIEKNLIVENSKEIIDGLTEIIGCDRTWFTIEHQNTEYIFDGKIVDGYTFVEV YWFARDEKIKKDTADFLTKLIKRINNNKDCCIIFFTLTGDNYCDNGEFF >gi|292606583|gb|ADGG01000027.1| GENE 16 14079 - 14318 335 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782626|ref|ZP_06747952.1| ## NR: gi|294782626|ref|ZP_06747952.1| pupal cuticle protein Edg-91 (Ecdysone-dependent protein91) [Fusobacterium sp. 1_1_41FAA] # 1 79 1 79 79 126 100.0 4e-28 MKKLFVFVILLLVVGVSSMAATFYHRPRHMGYMNGGSQYHNFGMYERTYNRDYCSNNYYS DGYNNGGNRGYCHSGSRWY >gi|292606583|gb|ADGG01000027.1| GENE 17 14390 - 15973 1850 527 aa, chain - ## HITS:1 COG:FN0904 KEGG:ns NR:ns ## COG: FN0904 COG2509 # Protein_GI_number: 19704239 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 527 1 527 527 928 92.0 0 MKVNISNIIVSINKNQEKEIYKELEKNGISRDNIENLKYLKKSIDSRKKNDIKFIYTLEI SLKKNINLEKYSKLSLAKDESYDKRIALYPKREVAVVGTGPAGLFSALRLAELGYIPIVF ERGEEVDKRNITTDNFIKTSILNPNSNIQFGEGGAGTYSDGKLNTRIKSEYIEKVFKEFI ECGAQEEIFWNYKPHIGTDVLRIVVKNLREKIKSLGGKFHFSSLVEDIEVKNNEISSLKI LEVDSGKRYNYDIDKVIFAIGHSSRDTYKMLYSKGIAMENKPFAIGVRIEHLRKDIDKMQ YGEAVSNPLLEAATYNMAFNNKKETRGTFSFCMCPGGEIVNASSEIGASLVNGMSYSTRN GKFSNSAIVVGVSERDYGSQIFSGMYLQEELEKKNYEIVGNYGAIYQNVIDFMKNQKTSF EIESSYKMKLFSYDINNFFPDYIRRNLHSAFENWSKNKLFISNKVNLIGPETRTSAPVKI LRDLKGESISIKGIFPIGEGAGYAGGIMSAAVDGIKIVDLAFSKKIV >gi|292606583|gb|ADGG01000027.1| GENE 18 15980 - 16951 1265 323 aa, chain - ## HITS:1 COG:FN0903_1 KEGG:ns NR:ns ## COG: FN0903_1 COG0794 # Protein_GI_number: 19704238 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Fusobacterium nucleatum # 1 206 1 206 206 372 94.0 1e-103 MLDQEIIEIAKNIYDTEIKSLEKRMNKLSENFVKVVRKIFDCKGKVVVTGIGKTGIIGKK ISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAFV IGMTGNINSRLAKASDLYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLRNFSP QNFAMYHPGGSLGRKLLTKVGNLMKTGEALALCKANTSMEDIVILMSEKKLGVVCVMNDD NSLLVGIITEGDIRRALSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRPHQIN VLPVFDDNNFVGVIRIHDLLKVR >gi|292606583|gb|ADGG01000027.1| GENE 19 17162 - 17704 810 180 aa, chain - ## HITS:1 COG:FN0902 KEGG:ns NR:ns ## COG: FN0902 COG0212 # Protein_GI_number: 19704237 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Fusobacterium nucleatum # 1 179 2 180 181 245 79.0 4e-65 MNKKDARNLIKERRMSLSMEYIESASDKILEKLLENEDFKNAKVIMSYMDFKNEVKTDKI NEYIKKAGKILVLPKVITKEKMIAIEDKNKYIVSPFGNSEPDGEEYIGEIDVIITPGVAF DRDKNRVGFGRGYYDRFFAIHKNAKKIAIAFEKQIIEEGIETTEFDMKVDTLVTEDNIIN >gi|292606583|gb|ADGG01000027.1| GENE 20 17697 - 18284 848 195 aa, chain - ## HITS:1 COG:FN0901 KEGG:ns NR:ns ## COG: FN0901 COG1573 # Protein_GI_number: 19704236 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Fusobacterium nucleatum # 1 195 1 195 195 276 74.0 1e-74 MEEISELWEELKFELGSVGIETLPKDKQEIYIGMGNRNADVLFIGNDPKLYLSEDYKVEA QSSGEFLIRLFDLAGIVPEAYYITTLTKREVKIKNFDVEEKKILLDLLNMQIALISPKII VFLGKEVAQMIENREVDLEKERGKFKKWKGDIECYLTYDVETVIKARNESGKKAAVATNF WLDIKNIKERLDHNE >gi|292606583|gb|ADGG01000027.1| GENE 21 18299 - 19078 1039 259 aa, chain - ## HITS:1 COG:FN0900 KEGG:ns NR:ns ## COG: FN0900 COG1235 # Protein_GI_number: 19704235 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Fusobacterium nucleatum # 1 259 1 259 260 462 92.0 1e-130 MNISILGSGSSGNSTFVEIEDYKLLVDTGFSCKKTEEKLEMIGKKLSDISAILITHEHSD HINGAGVIARKYDIPIYITPESYRAGASKLGEIDKSLIKFIDGSFILDDKVKVSPFDVMH DAERTIGFKLESQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCSYPWN LKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKDSNHLSIIKETLEDEFTGMLR KPNCEITSQDKVTKLFTIE >gi|292606583|gb|ADGG01000027.1| GENE 22 19084 - 19800 739 238 aa, chain - ## HITS:1 COG:all3753 KEGG:ns NR:ns ## COG: all3753 COG0300 # Protein_GI_number: 17231245 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Nostoc sp. PCC 7120 # 2 183 7 195 263 95 33.0 1e-19 MKIALVTGASSGIGYEIAKTLLNMDYQVYGVARNFIKNETKIFEEYENFFPVVCDLAKLD ELEKTLHSLKKIKFDLIVNSAGLAYFGLHEEINIAKIKNMISVNLQAPLVISQYFLRTLK ENKGTIINISSVTANKESPLACVYSATKAGLSQFSKSLFEEVRKNDVKAITIYPDMTKTN FYQNNTYFECDDDEKAYIKSEDIAKTIEFILNQSDNIVFTDVTIKPQRHKIKKIKRKE >gi|292606583|gb|ADGG01000027.1| GENE 23 19972 - 21834 1649 620 aa, chain - ## HITS:1 COG:FN0898_2 KEGG:ns NR:ns ## COG: FN0898_2 COG1533 # Protein_GI_number: 19704233 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Fusobacterium nucleatum # 292 620 2 330 330 523 90.0 1e-148 MLYIVTALYIEAKPLISLFNLKKDNSYTKFQVFSNENVKLIISGTGRVKSATALTYLVSK EDIKKNDYIVNVGFVASNKNSQLGDIVYVSKIQNTYSDFDFYPEMIYKHNFLEGSLTTFD SIVEKKNENIEYIDMEAYGFFQTASIFFKKDKIMVLKIVSDILKNKAEDRILVDFKDENL FSESYNNIYKFLVNFKTVNDDSDFTITEQELIKKVLENLRLSDTMTYELFNILRYLKIKY GNIDILKKYENIEVTSKVQAKKLFEEIKNISLQKNSSEKTVSPEINKKKIALNNRFSHIY VEKKILGNKNTLEILSKFRDAKIIEIDNYKEVFSSNNQDFHLQKLGQNLILASNKPNMIY EGAIVCEDFENDNFYYTSSIINCVYDCEYCYLQGVYSSGNIVIFVDIEKVFEEVEELYNK LKSLYLCVSYDTDLLAIENICSFSEKWYHFIKDKKDLKIELRTKSGNIDKFLNLDVLDNF IIAFTLSPEEIALKNEKYTASFKNRVKAIKELQNKGWKVRICIDPLIYTDDFEKNYSEMI EYLFSEIDKNKVIDVSIGVFRTSKEYLKKMRNQNKKSEILYYPFECIDGVYTYSDKLKSY MIDFIKENFLKYINIEKIYI >gi|292606583|gb|ADGG01000027.1| GENE 24 21852 - 22079 396 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782634|ref|ZP_06747960.1| ## NR: gi|294782634|ref|ZP_06747960.1| toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein [Fusobacterium sp. 1_1_41FAA] # 1 75 1 75 75 125 100.0 7e-28 MATLTINTDEKTTENFYAFCEELGLDMSTAITLYMKACLREQKIPFELKVAKKEVVQNVR TAPATIEELLENYDI >gi|292606583|gb|ADGG01000027.1| GENE 25 22151 - 22819 261 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241889384|ref|ZP_04776685.1| 30S ribosomal protein S8 [Gemella haemolysans ATCC 10379] # 16 222 14 216 216 105 33 4e-22 MREVKDFIKNKKIDLKRLEKFGFKLKDNSYYYDTSLLKNQFKMCVKINLDNSIFTELIDV ETNEPYVLHLLEMKRSGYSEKVYMAYSEILERIKKECFEDEIFKTNYTNEIINYIKNKYG DELEFLWEKSPKTAVIRRKYSKKWYAVILTLSKRKLNLDSDELVEVINLHNSPEEIEKLI DNKRYFLAYHMNKKHWCTICLDGTVELKEIYKLIDISYELAK >gi|292606583|gb|ADGG01000027.1| GENE 26 22922 - 24229 1297 435 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0718 NR:ns ## KEGG: Lebu_0718 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 430 1 438 439 369 50.0 1e-100 MFFFKKKENLFVDILDLKVDYSEIINIKEAKLVYVNGKGKLTVEIGKTEPNIWQAPSKIK LNDIPLIQSKVSDIPTWCNLLATGYGIENANCKELLDIQEKINSDYVNLETSINNMKPLL TLLKSGFYLIADAICYPTDGENFFWNVPNNLTENLTTAPVYLGEGTYVFDQPVYLYPTQT TNSYNKDRVDYYIEKFKNSTYNKPRAIVYNFEEFINFIVDGHHKACASTILKEPVSCILI IPAKIYEDYYKNTCLNFSGILIDYKNIPKEYTRYIKKERFSPSQEKIEIKDGIVNNREWE KEYINSAKYYPSIIDYANVIDIMQDKKIEVNDIFIENCLENFDEDSQVKMKKLLYLLEFT DIKKAQEIALKYARKTLREEEIDKELKQLVYRILLSAKNNEEVEKIFIDYLVYYSENKED PILKIINLYWGENNG >gi|292606583|gb|ADGG01000027.1| GENE 27 24222 - 25805 1627 527 aa, chain + ## HITS:1 COG:no KEGG:GYMC10_2788 NR:ns ## KEGG: GYMC10_2788 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 1 525 1 528 551 225 33.0 3e-57 MDKTLKEKIIKATFEGIDKIIESEYKNHPNEKSYSSCRIQEGYNDYLKIVFRKGKINYFR YNFEWSTTPDEKINCEELKETQRDDFVKEIVPEIKAKFEDLFFKYEDSFLFRYKFLLVLE FEGEEGLAKDRTYKEEFYFENKKRKEELKSKMEEYIKEVFLEEKRAIKDERECVIFAGNL LDFNLMGYSEKYIIELIEKILQVMKSVKNRRFDTTLKNDIKYYLDKWTREIFLKLEPEKV TEEQIDLYIYSALLKIKYRTYSFDVKNACNDLENAMNNYSSQKAKQYLEKGSGTLADELI HYKDKNLECKANDILSIVDIKIKNEVSSSYEKALNFIITLLNNGFPHSYSIKFSSKSEKI FLDIKGLAKSSTHRFFRRILDFPELYDKLEVYAKTAMKEFEWYQDVEAGEKSLLPGSYAV FALGLYDEKYFPLIKEYYSKLDDEHQLAHQHFITALIDRYGLTEKSLPIFLDGFLSGQFD KVFKNLAILLEDEENKKLLIKELENYGKHERQTILYSIWGNKWKKFL >gi|292606583|gb|ADGG01000027.1| GENE 28 25829 - 26734 1053 301 aa, chain + ## HITS:1 COG:no KEGG:FN0895 NR:ns ## KEGG: FN0895 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 160 1 146 154 125 54.0 2e-27 MDNTLKEKVVNTIFEGVYKIIENEYKHHPDEKPYSCSAIQEGYNDYLRIVFKKEEINYFR HNFNWITKSDLKIVCEELNEIKKDDFEQEIVPEIKAKFEDLFFKYEDSFLFRYKILLILE FDTYSNEFYIENKERKEELKSKMDEYIKEITLEGNNLIKDHRECYIFCRNFLDFNLMEYS ERYLIELIEKILQVMKSTKNEQIESDFKYNTILFLENWTKNIFLKLEPKGVTEEQIDLYV YKALFQLKYSKYKDDIIYAYEDLTNASDIYYSQKAKQYLEKGSGTLADELIYYRNEYLEE F >gi|292606583|gb|ADGG01000027.1| GENE 29 26838 - 27221 392 127 aa, chain + ## HITS:1 COG:no KEGG:FN0896 NR:ns ## KEGG: FN0896 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 125 1 126 127 149 64.0 3e-35 MKKEEKVAEFLREEGYNVSAEDILIGQFVPSFLQNFITFVPKYVFLAYNDKEFFVIGTNV WKGTPDKNKLRSYSLNEVDIKLKNALLNGKLVLTFNDGKKEKYRIFKLNFASFASRNFKK ALEHFDR >gi|292606583|gb|ADGG01000027.1| GENE 30 27239 - 27367 101 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237740261|ref|ZP_04570742.1| ## NR: gi|237740261|ref|ZP_04570742.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] # 1 42 1 42 529 65 83.0 1e-09 MDNFLKEKLINTTFEGLDKIIESEYKNHSNEKSYSSCRIQEG >gi|292606583|gb|ADGG01000027.1| GENE 31 27764 - 28909 1054 381 aa, chain + ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 4 375 1 371 407 239 41.0 7e-63 MKIIKKAYKFRIYPTLEQVIFFSKNFGCVRKVHNLMLDDRKKDYEEYKSTGIKTKYPTPA KYKEEYPYLKEVDSLALANAQLNLEKAFKNFLKNKDFGFPKYKCKSNPVQSYTTNNQNTI YIKDSYIKLPKLKSLVKIRLHREIKGIIKSVTISKNSLDHYFASILCDEEIEELAKTNKN IGIDLGIKEFATMSDCTKVENLKLSKEYEKKLKREQRKLSKRCKVAKDSAKKLSDSKNYQ KQKKKVAKIHNKIRNKRKDFVNKLSTKIINNHDIICIEDLNIKGMLKNHKLAKSISDVSW SEFVRQLEYKANWYRRKIIKVPTFYPSSKTCSSCGNIKETLKLSERIYHCECCGLEIDRD YNASINILRKGLEILREEKVS >gi|292606583|gb|ADGG01000027.1| GENE 32 28955 - 29131 95 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782641|ref|ZP_06747967.1| ## NR: gi|294782641|ref|ZP_06747967.1| hypothetical protein HMPREF0400_00620 [Fusobacterium sp. 1_1_41FAA] # 1 58 1 58 58 97 100.0 4e-19 MWLTKAHTSQEAPTSISGSGSLLIYCRIIVSNMTDKNISEVTTYLNLETIAFIINNFY Prediction of potential genes in microbial genomes Time: Thu May 19 21:47:10 2011 Seq name: gi|292606582|gb|ADGG01000028.1| Fusobacterium sp. 1_1_41FAA cont1.28, whole genome shotgun sequence Length of sequence - 9487 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 6, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 5.4 1 1 Tu 1 . + CDS 159 - 1190 689 ## VV1_2035 Na+-driven multidrug efflux pump + Term 1286 - 1321 3.1 2 2 Tu 1 . - CDS 1305 - 3326 2221 ## COG1479 Uncharacterized conserved protein - Prom 3357 - 3416 10.6 3 3 Op 1 12/0.000 - CDS 3474 - 4118 173 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 4 3 Op 2 1/0.000 - CDS 4099 - 4560 612 ## COG0802 Predicted ATPase or kinase 5 3 Op 3 1/0.000 - CDS 4573 - 5037 621 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 6 3 Op 4 . - CDS 5024 - 5641 755 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 7 3 Op 5 . - CDS 5652 - 6191 763 ## COG1859 RNA:NAD 2'-phosphotransferase - Prom 6218 - 6277 9.8 - Term 6237 - 6296 4.2 8 4 Tu 1 . - CDS 6309 - 7034 615 ## gi|294782649|ref|ZP_06747975.1| conserved hypothetical protein - Prom 7220 - 7279 6.1 9 5 Op 1 . - CDS 7295 - 7771 419 ## gi|294782650|ref|ZP_06747976.1| conserved hypothetical protein 10 5 Op 2 . - CDS 7782 - 8996 1531 ## gi|294782651|ref|ZP_06747977.1| conserved hypothetical protein - Prom 9026 - 9085 15.2 - Term 9074 - 9120 8.2 11 6 Tu 1 . - CDS 9306 - 9485 274 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606582|gb|ADGG01000028.1| GENE 1 159 - 1190 689 343 aa, chain + ## HITS:1 COG:no KEGG:VV1_2035 NR:ns ## KEGG: VV1_2035 # Name: not_defined # Def: Na+-driven multidrug efflux pump # Organism: V.vulnificus # Pathway: not_defined # 38 337 88 397 408 127 27.0 8e-28 MWLTKAHTSQEAPTSISGSGSLLIYCRIIVSNMTDKNISEVTTYLNLETIAFIINNFINF FMVILIFINKAKYFYLSCLLKTVFIIIGDLYLIPKFQVNGVAFSNILVNLLILIFCLFVL YKEDLFPKFSLNFDKALIKDYFYGGSFIGLQIILDNLIYVLIVGKMITTVNEQGNYWVAN NVIWGLLLIPIMSLGDIIKKEANTLTNYKIKYFSKVIVINFILFLIYLLFSDAFLEKVMQ LKDYTLITSIIKVSTIFYLFYMVSLVVDNIFIAQNQSKYLFYISVIVNLIYYPIVYYLVK INFFITNINFICYMFGTGMLIHMLLSFIFLYSAIKSKKIIISK >gi|292606582|gb|ADGG01000028.1| GENE 2 1305 - 3326 2221 673 aa, chain - ## HITS:1 COG:Z5943m_1 KEGG:ns NR:ns ## COG: Z5943m_1 COG1479 # Protein_GI_number: 15804980 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 556 1 556 592 319 36.0 1e-86 MKASERKITKLFSESDTVFSIPVYQRDYNWQEKQCQRLFKDILQTGKNEKVSSYFLGSIV YIHDGIYGVGEKEFHVIDGQQRMTTLTLLFLAIYFKLKGTILAKDADKIYNQYVVNPYSE KEIKLKLLPPEENLYILNKISHNKFNELEAFQDRNMLKNYLFFEKELETLSFEDMKHLSN GIEKLIYIDIALEKGKDDPQKIFESLNSTGLDLSQGDLIRNYILMDLERGEQNRIYKEIW IPIENNCKVSDGSEITSYVSDFIRDYLTLKTEKISSKPKVFETFKVYYEKENDEKLEDMK KYSEAYSYIIKPSLEKDRDIQRELDYLKSLDKTVINTFLIGILKDYKDNILEKDELLNIL ILLQSYLWRRYITEKPTNALNKIFQGMYGKISRSGNYYENLVDVLMAEDFPTDEELESAL KLKNVYKDKEKLNYVFKKLENYNHNELIDFENEKITIEHIFPQKPNKAWKENYSDNELEQ MISFKDTISNLTLTGSNSNLSNKAFHEKRDDEVHGYKNSKLYMNKYLGRLEEWNLLSMEA RFESLYDDIIKIWKRPEDKATNDMEKITFVLKGKITSGKGRLLSNEKFEILKGTSIVLEV KSDNPSTFRRNKNLIEDLIRKNLIEKLEDRYVFKENYIATSPSAAAILVLGRSANGWTEW KTYEGKLLSDYRK >gi|292606582|gb|ADGG01000028.1| GENE 3 3474 - 4118 173 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 43 214 1 183 380 71 28 3e-12 MLLLGIDTSTKICTCSIYDSEAGVIAETSLSVKKNHSNIVMPIVDNLFKISDLNIKDIDK IAVAIGPGSFTGVRIALGIAKGLAMALNKGLVAVNELDILEAMASDNENEIIPLIDARKE RVYYKYQGKCQDDYLINLLSSLDKNKKYVFVGDGAINYADILKENLGENAIIVPRYNSFP RASVLCELSLNREDANIYTVEPEYISKSRAEKNF >gi|292606582|gb|ADGG01000028.1| GENE 4 4099 - 4560 612 153 aa, chain - ## HITS:1 COG:FN0929 KEGG:ns NR:ns ## COG: FN0929 COG0802 # Protein_GI_number: 19704264 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Fusobacterium nucleatum # 1 153 1 153 153 232 90.0 3e-61 MEKVLTFSQIDELAKKLANYVEENTAIALIGDLGTGKTTFTKTFAKEFGVKENLKSPTFN YVLEYLSGRLPLYHFDVYRLCSSEEIYEIGYEDYINNGGVALIEWANIISEDLPKEYIRI EFKYAEKEDERIVDISYVGNKEKEEKFNVAFGN >gi|292606582|gb|ADGG01000028.1| GENE 5 4573 - 5037 621 154 aa, chain - ## HITS:1 COG:FN0930 KEGG:ns NR:ns ## COG: FN0930 COG2870 # Protein_GI_number: 19704265 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Fusobacterium nucleatum # 1 154 7 160 160 263 91.0 1e-70 MNINRKLATELVEEAKKNGKKVVFTNGCFDILHVGHVTYLTEAKRQGDILIVGVNSDASV KRLKGETRPINSEYDRAFVLDALKSVDYTVIFEEDTPEELIACLKPSIHVKGGDYKKEDL PETKIVESYGGEVIILNFVEGKSTTNIIEKINKK >gi|292606582|gb|ADGG01000028.1| GENE 6 5024 - 5641 755 205 aa, chain - ## HITS:1 COG:FN0931 KEGG:ns NR:ns ## COG: FN0931 COG0494 # Protein_GI_number: 19704266 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 205 1 205 205 309 80.0 2e-84 MNKNRILLRERYFESAVMFCIANIGGKDCFILEKRAKNIRQAGEISFPGGKKDKTDKTFK ETAIRETMEELQIKRNKISNVSKFGLLVAPLGVLIECYICKLNIENLDEINYNRDEVEKL LAVPIEFFMETEAIKGEVEICNKAKFDIKKYNFPKRYENDWRIPNRYVYIYMFEEEPIWG MTAEIICDFINTLKKEGKVGFYEYK >gi|292606582|gb|ADGG01000028.1| GENE 7 5652 - 6191 763 179 aa, chain - ## HITS:1 COG:FN1102 KEGG:ns NR:ns ## COG: FN1102 COG1859 # Protein_GI_number: 19704437 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNA:NAD 2'-phosphotransferase # Organism: Fusobacterium nucleatum # 1 179 1 179 179 303 93.0 1e-82 MDNDVKLGKFISLILRHKPETIDLKLDENGWADTKELIEKISKSGREIDFETLERIVNEN NKKRYSFNEDKTKIRAVQGHSIEVNLELKEVVPPAILYHGTAFKNVESIKKEGIKKMERQ HVHLSADLETAKNVATRHSSKYVILEIDTEAMLKENYKFYLSENKVWLTDFVPSKFIKF >gi|292606582|gb|ADGG01000028.1| GENE 8 6309 - 7034 615 241 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782649|ref|ZP_06747975.1| ## NR: gi|294782649|ref|ZP_06747975.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 241 58 298 298 367 100.0 1e-100 MEDNGDSENFQDKVQEIYNKISNFEIEYESSSKNYGKSEGAIYERKKENLKADYFLNILK LKRIITKSLNINVIKTYKNLNRKRQNEEIIFKGNKKINGSKLVVAIDVSGSITEADLEKF INMLYGLNKKKKDYLFDIIYWSDNDIKENQTYYEDVKDIKEFAKKEIYSSGGTDISYLHS YLNERYKEAIEVVNITDGYFYYDKNLNKNIVKYHFVLTEGIDKDFSSFYSEKKFSIVSIE N >gi|292606582|gb|ADGG01000028.1| GENE 9 7295 - 7771 419 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782650|ref|ZP_06747976.1| ## NR: gi|294782650|ref|ZP_06747976.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 158 1 158 158 226 100.0 4e-58 MEIKVNRRRRKFDISSENERKKLIEKLLIEHINEFPFFINLLISVFDIKDVENNHKDELA YTKANFENQRIEIYINFKKIEKYQLIVNNKENNFVFGNKEILFIIFHELLHHYLYHFTRF KENNLLINIITDYYVNSLCLELLNNQKNVDIFYILKKF >gi|292606582|gb|ADGG01000028.1| GENE 10 7782 - 8996 1531 404 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782651|ref|ZP_06747977.1| ## NR: gi|294782651|ref|ZP_06747977.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 404 1 404 404 709 100.0 0 MIGKYGQIIINDKKTLLKEITTMLPYTTIHLIGPSGSGKTSLVESLINIKELEIDELKIV RLQGVSSEDFRLPVVKTLKKNFSFEEERKVVELINMGIFQEILDNPDKKYLVFFDELLRA EASITPLLFGLLERRINGIKAPNMLVMCSSNYGDEYISNFDFSDSALRRRQIFIEYKPSK DDILDFMKENRYNDILISAISDMKIEEIISHDDTSLELEQDTQLGSWSLLNDRWKKLKIE TFKAGRLDISKYGEYFFSSKTKKKFLNNLTLLEQLDDIDVHKQIIVNKGLENDKDILNQQ GEVINKGIMLTELKIRTKKFIINQTLNKDENYFLDYFDDILQVFKNDTLLFIILIEEFKE RAKGNNKNKSIWRRIAVKILKEISETSELGKSLYRVTDLLNLKV >gi|292606582|gb|ADGG01000028.1| GENE 11 9306 - 9485 274 59 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 54 323 376 405 90 66.0 9e-19 SRFFASSQICNCCGYRNEEVKDLSVREWTCPVCGAVHNRDINAAKNILKEGLKILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 21:48:10 2011 Seq name: gi|292606581|gb|ADGG01000029.1| Fusobacterium sp. 1_1_41FAA cont1.29, whole genome shotgun sequence Length of sequence - 71379 bp Number of predicted genes - 67, with homology - 64 Number of transcription units - 23, operones - 16 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 297 - 524 332 ## FN1099 hypothetical protein 2 1 Op 2 . - CDS 581 - 934 417 ## gi|254303060|ref|ZP_04970418.1| hypothetical protein FNP_0699 3 1 Op 3 . - CDS 1006 - 1569 665 ## gi|254303060|ref|ZP_04970418.1| hypothetical protein FNP_0699 - Prom 1675 - 1734 8.8 - Term 1711 - 1760 4.9 4 2 Tu 1 . - CDS 1773 - 1973 346 ## gi|262068197|ref|ZP_06027809.1| putative flagellar protein - Prom 2072 - 2131 11.1 + Prom 2088 - 2147 12.5 5 3 Op 1 . + CDS 2307 - 2417 79 ## 6 3 Op 2 . + CDS 2414 - 2797 553 ## COG3654 Prophage maintenance system killer protein + Prom 2813 - 2872 9.9 7 4 Op 1 2/0.000 + CDS 2901 - 3983 965 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 8 4 Op 2 . + CDS 4005 - 6389 2651 ## COG0210 Superfamily I DNA and RNA helicases 9 4 Op 3 . + CDS 6463 - 6681 482 ## FN1302 hypothetical protein + Term 6689 - 6744 9.1 - Term 6676 - 6731 8.3 10 5 Op 1 36/0.000 - CDS 6738 - 7964 359 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 11 5 Op 2 24/0.000 - CDS 7961 - 8623 316 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 12 5 Op 3 . - CDS 8638 - 9777 1418 ## COG0845 Membrane-fusion protein 13 5 Op 4 . - CDS 9790 - 11055 1259 ## FN0825 putative cytoplasmic protein 14 5 Op 5 . - CDS 11102 - 11863 774 ## FN0824 DeoR family transcriptional regulator - Prom 11900 - 11959 6.2 15 6 Op 1 1/0.000 - CDS 11989 - 13791 540 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 16 6 Op 2 . - CDS 13806 - 14324 456 ## COG0703 Shikimate kinase - Prom 14403 - 14462 13.6 + Prom 14403 - 14462 11.7 17 7 Op 1 8/0.000 + CDS 14504 - 16249 1740 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 18 7 Op 2 . + CDS 16239 - 17921 194 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 18002 - 18044 -1.0 + Prom 18056 - 18115 5.4 19 8 Op 1 2/0.000 + CDS 18140 - 18649 566 ## COG0716 Flavodoxins 20 8 Op 2 . + CDS 18714 - 19184 459 ## COG1309 Transcriptional regulator + Term 19186 - 19242 5.7 21 9 Op 1 . - CDS 19575 - 20144 601 ## FN1315 hypothetical protein 22 9 Op 2 1/0.000 - CDS 20160 - 20936 878 ## COG0327 Uncharacterized conserved protein 23 9 Op 3 1/0.000 - CDS 20933 - 21712 941 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 24 9 Op 4 31/0.000 - CDS 21773 - 23275 2158 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 25 9 Op 5 1/0.000 - CDS 23306 - 25111 1945 ## COG0358 DNA primase (bacterial type) - Term 25121 - 25167 8.2 26 9 Op 6 1/0.000 - CDS 25170 - 26861 2122 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 27 9 Op 7 1/0.000 - CDS 26886 - 28271 1900 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - Prom 28294 - 28353 3.8 28 9 Op 8 1/0.000 - CDS 28361 - 29380 1165 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 - Term 29390 - 29434 -0.6 29 9 Op 9 1/0.000 - CDS 29436 - 30110 851 ## COG0125 Thymidylate kinase 30 9 Op 10 15/0.000 - CDS 30098 - 31261 1482 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 31 9 Op 11 32/0.000 - CDS 31279 - 32160 1052 ## COG0575 CDP-diglyceride synthetase 32 9 Op 12 . - CDS 32153 - 32845 905 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 32865 - 32924 10.6 - Term 32917 - 32967 10.0 33 10 Tu 1 . - CDS 32968 - 33330 368 ## Ctu_00950 hypothetical protein - Prom 33491 - 33550 5.8 + Prom 33311 - 33370 6.0 34 11 Op 1 . + CDS 33399 - 33614 202 ## 35 11 Op 2 . + CDS 33553 - 33747 175 ## gi|294782683|ref|ZP_06748009.1| hypothetical protein HMPREF0400_00663 + Prom 34356 - 34415 5.0 36 12 Op 1 . + CDS 34451 - 34600 89 ## 37 12 Op 2 . + CDS 34648 - 34827 94 ## gi|294782684|ref|ZP_06748010.1| hypothetical protein HMPREF0400_00664 - Term 35070 - 35117 9.7 38 13 Op 1 13/0.000 - CDS 35120 - 35449 365 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 39 13 Op 2 . - CDS 35454 - 36461 1091 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 40 13 Op 3 . - CDS 36475 - 37866 1450 ## TherJR_2016 CRISPR-associated protein Csm6 41 13 Op 4 . - CDS 37859 - 38581 528 ## COG5551 Uncharacterized conserved protein 42 13 Op 5 . - CDS 38565 - 39731 1208 ## Vpar_1802 CRISPR-associated RAMP protein, Csm5 family 43 13 Op 6 7/0.000 - CDS 39728 - 40732 978 ## COG1567 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 44 13 Op 7 . - CDS 40732 - 41439 951 ## COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 45 13 Op 8 . - CDS 41476 - 41835 424 ## TherJR_2021 CRISPR-associated protein, Csm2 family 46 13 Op 9 . - CDS 41839 - 44379 2346 ## COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs) - Prom 44490 - 44549 11.2 + Prom 44480 - 44539 16.1 47 14 Tu 1 . + CDS 44699 - 45499 819 ## Lebu_1194 hypothetical protein + Prom 45596 - 45655 15.0 48 15 Op 1 . + CDS 45706 - 47004 1126 ## COG1373 Predicted ATPase (AAA+ superfamily) 49 15 Op 2 1/0.000 + CDS 47068 - 47826 1150 ## COG0084 Mg-dependent DNase 50 15 Op 3 1/0.000 + CDS 47823 - 48191 579 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Prom 48307 - 48366 2.5 51 15 Op 4 . + CDS 48390 - 49316 1128 ## COG1186 Protein chain release factor B + Term 49322 - 49368 9.3 + Prom 49328 - 49387 10.1 52 16 Op 1 . + CDS 49445 - 50029 669 ## gi|294782699|ref|ZP_06748025.1| conserved hypothetical protein 53 16 Op 2 . + CDS 50038 - 50625 465 ## gi|294782700|ref|ZP_06748026.1| hypothetical protein HMPREF0400_00680 + Prom 50629 - 50688 2.1 54 16 Op 3 . + CDS 50709 - 52241 2331 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 52252 - 52309 16.1 55 17 Op 1 . + CDS 52726 - 53247 732 ## gi|294782702|ref|ZP_06748028.1| conserved hypothetical protein 56 17 Op 2 . + CDS 53259 - 64178 14049 ## Sterm_0989 outer membrane autotransporter barrel domain protein + Term 64195 - 64250 12.2 - Term 64191 - 64232 10.0 57 18 Tu 1 . - CDS 64258 - 64506 364 ## FN1084 hypothetical protein - Prom 64543 - 64602 10.5 58 19 Op 1 . - CDS 64631 - 65227 688 ## COG2431 Predicted membrane protein 59 19 Op 2 . - CDS 65224 - 65499 284 ## FN1082 hypothetical protein + Prom 65770 - 65829 19.2 60 20 Tu 1 . + CDS 65893 - 66336 863 ## COG2849 Uncharacterized protein conserved in bacteria 61 21 Tu 1 . + CDS 66811 - 67692 939 ## gi|294782708|ref|ZP_06748034.1| conserved hypothetical protein + Term 67710 - 67752 -0.4 - Term 67688 - 67747 14.1 62 22 Op 1 1/0.000 - CDS 67764 - 68537 937 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 63 22 Op 2 . - CDS 68537 - 69154 1006 ## COG0461 Orotate phosphoribosyltransferase 64 22 Op 3 . - CDS 69170 - 70045 1007 ## gi|294782711|ref|ZP_06748037.1| hypothetical protein HMPREF0400_00691 65 22 Op 4 . - CDS 70035 - 70748 1033 ## COG0284 Orotidine-5'-phosphate decarboxylase 66 22 Op 5 . - CDS 70765 - 71022 251 ## gi|294782713|ref|ZP_06748039.1| conserved hypothetical protein 67 23 Tu 1 . - CDS 71169 - 71378 304 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606581|gb|ADGG01000029.1| GENE 1 297 - 524 332 75 aa, chain - ## HITS:1 COG:no KEGG:FN1099 NR:ns ## KEGG: FN1099 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 75 1 75 75 96 88.0 2e-19 MSVVSIRFNDEEEEIVKNYVKSKGTNLSQYIKNIIFERIEEEYDLKLVQEYIKAKSEETL NLIPFEEAVKEWDTE >gi|292606581|gb|ADGG01000029.1| GENE 2 581 - 934 417 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254303060|ref|ZP_04970418.1| ## NR: gi|254303060|ref|ZP_04970418.1| hypothetical protein FNP_0699 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 115 218 332 332 129 72.0 6e-29 MIKANKESLTLKILKDDIEIEQEDIEDFINELKSFPTVTEYYSNNKIIKKDIFKVERIME ISDSCIFYANLSLDGVLEKTEKYNDNNEIDEIEEINRYIRVVNADFGDYLPGIKFSN >gi|292606581|gb|ADGG01000029.1| GENE 3 1006 - 1569 665 187 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254303060|ref|ZP_04970418.1| ## NR: gi|254303060|ref|ZP_04970418.1| hypothetical protein FNP_0699 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 186 7 191 332 182 75.0 6e-45 MEEKETFIEQEKKFLKELLEKYRIENPKEEINLEEEIKRIEEEMKRMEEEDPSIIERAEE FWDNLLFEEDDDENDLENEEVNIEKKERVYTLKNKIKIIHKYEENTLNLDNCGTKLLKIE KYNKDGKMEIECFYQHGLLKKIIYYNEDQTINNIDYFDIYYDSKQSSISDIYLFFLSKMD KYFKIKI >gi|292606581|gb|ADGG01000029.1| GENE 4 1773 - 1973 346 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262068197|ref|ZP_06027809.1| ## NR: gi|262068197|ref|ZP_06027809.1| putative flagellar protein [Fusobacterium periodonticum ATCC 33693] # 1 66 1 66 66 80 95.0 3e-14 MSYLLTSMEEVRKENEKRQRILELKEAIKKAEAEWNTSDVEKLKKELKGLTNESFLTKIF KSDARY >gi|292606581|gb|ADGG01000029.1| GENE 5 2307 - 2417 79 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTEEINENKLAKDEELKKIALKIMEKFEKTFEVLAK >gi|292606581|gb|ADGG01000029.1| GENE 6 2414 - 2797 553 127 aa, chain + ## HITS:1 COG:alr9029 KEGG:ns NR:ns ## COG: alr9029 COG3654 # Protein_GI_number: 17227494 # Func_class: R General function prediction only # Function: Prophage maintenance system killer protein # Organism: Nostoc sp. PCC 7120 # 4 127 5 128 128 89 39.0 1e-18 MIILSKEQILNLHSQLINKFGGIDGVRDEGLLESALNNAYGVYFGLENYPTVEEKAARLA YSLTKNHPFLDGNKRIGVLIMLVFLEINKTELTCNNEELTDLGLKIAASQKSYEDILEFI NIHKKDI >gi|292606581|gb|ADGG01000029.1| GENE 7 2901 - 3983 965 360 aa, chain + ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 360 1 360 360 627 89.0 1e-180 MKKTLILIPALNPPKQLIDYVKSLLDNNLKDILLVDDGSKEEFKEIFEIIEKFPDANIKV FRHAKNFGKGRALKNAFNYFLTLPNLDEYNGVVTADSDGQHRVEDVIRLAKEVEENPNTL ILGCRDFDLEQVPPKSKFGNKITNGAFKLFYGKDISDTQTGLRGFPTAIIKDFLDIAGER FEYETKMLIFCFQKEIPIKEVVIETIYFDDNSETHFNPIIDSIKIYKVTLSPFLKYIASA ISSFVLDILSFKWILVLLLAFGNIEGASVITIATIVARIISSSFNFYLNKKFVFKYEKNT KKSLLKYYSLCAIQMLVSAFFVTLVWKHTKHSETSIKIVVDSVLFLLSYFIQQRWVFKRK >gi|292606581|gb|ADGG01000029.1| GENE 8 4005 - 6389 2651 794 aa, chain + ## HITS:1 COG:ECs5264 KEGG:ns NR:ns ## COG: ECs5264 COG0210 # Protein_GI_number: 15834518 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 4 486 238 693 704 98 24.0 5e-20 MSEIILSSEQRTVARYNENGVIRVNGGPGSGKTLVAVKRAIFLAKDYKYSEKNDKILFLF YNKSLERTIRKLFESDEDYEKVKDKIEIKSIDAFLVNDYINSNNKEFLEFVKRARNNIKF VKTKNPERKERIKNILKTRSIEFKNFTVEDAEFILSEIDWLRDCSYLTEEEYLQINRDGR GSQNPLTTKKRMEIYKILRLYRENGPKDSDLRYTDFYDLASLFLFYFEKEENKGKIKKYN HVIVDEAQDLSKIHFRFINLICEISKTSGNTISLFMDKNQSIYSKQAWISKKRTLKQVGI SISKSFSLNRAYRNAKEIFDVAIKLNPETEVGDISTDKNQNLTLTFSVDRGIKPLFLRYP DLSFEEGIKNLSKNIEILVDKFNYKYDDISVISLNKLYNPKKKEEYKTEVDRMIESLHDK GTDVTTYYSAKGTENKVIFIPSIDEFDIDKLSERYPDKTKEEILEEFKKLLYVGMTRATE VLIISSLNSEASDSLKKLLEVFDFENDFINIDTDSNDFYSVFNKEINKNENIEKNHTKFS EIKEVIEEEKITDIVIQKEKEALKIDIDERDNIEIEKEIENKFPSAHKFTKMGLIKAENF FLGADKNGNALHTEGFEYLKAFEYEIRTYYITIQEKAKESYSKNERMHTILKKLKTHHEF KNIVSKCFDSKVFDERNDLAHDYNEFTYNDLLEIRKLIMEDLLPSFIKAFNKYKINKGID EFIIVGKLETSYNKVDIQKKKYYSYCIIDENNNSFLAFSENKYKQDIIYKLTVNKLMLKG NEYYRILEANNFRD >gi|292606581|gb|ADGG01000029.1| GENE 9 6463 - 6681 482 72 aa, chain + ## HITS:1 COG:no KEGG:FN1302 NR:ns ## KEGG: FN1302 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 72 1 72 72 112 81.0 4e-24 MKALLEKLAWKKCHIATVNHKFKDATILEVADGFVLIETDEKEKALINLDFIRIVVEAKE GALPPVFVPHDL >gi|292606581|gb|ADGG01000029.1| GENE 10 6738 - 7964 359 408 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 7 408 9 413 413 142 28 4e-33 MSFFDILKGSLATLKANKLRTLLTMLGIIIGISSVIAMWAIGNGGRDSILGDLKKVGYGK FTVTIDYKNENFKYKDYFTMENIDMLKNSHKFKAVSINVEDAFRMLKDNEPYYSYGTVTT EDYEKISPVTMTSGRNFLPFEYTSNERVIILDSMSARKLFADEKLSLGQTVEITKDRKKT GHSYKIVGVYKSPYETLGSLFGDGDNYPILFRMPYKAYSIAFNDDSDVFSSLIIEAKNAD TITDSMREAKNILEFNKNVKDLYLTQTVSSDIESFDKILSTLSLFVTMAASISLLVGGIG VMNIMLVTVVERTKEIGIRKALGAKNRDILKQFLFESIILTVFGGLVGMGVGVLFGFLAG AVMGIKPIFSLTSIIVSLSISIIVGVIFGVSPARRAAKLNPIDALRTE >gi|292606581|gb|ADGG01000029.1| GENE 11 7961 - 8623 316 220 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 2 220 1 218 245 126 33 4e-28 MIITVDKVNKTYKNGSLELQVLKNISFKVDKGEFLAIMGSSGSGKSTMMNILACLDSQYE GTYILDGIDISKLTENQLSEIRNKKIGFIFQSFNLLPRLSALENVELPLVYSSVPKAERH KRATELLEMVGLKDRMHHKPNELSGGQRQRVAIARALVNDPSIILADEPTGNLDSKSEEE IIEILQELNRTGKTIVIVTHEPNIGDIAQRKIVFKDGEII >gi|292606581|gb|ADGG01000029.1| GENE 12 8638 - 9777 1418 379 aa, chain - ## HITS:1 COG:FN0826 KEGG:ns NR:ns ## COG: FN0826 COG0845 # Protein_GI_number: 19704161 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 43 379 1 338 338 474 82.0 1e-133 MKNIFKGKLKFVILLLVLIFILFYYFTHRGKKEEVYVDEYSYMKVEQTDEIGTINLNGYV KANNPIGIFVDKKLKVKEVFIKNGDFVEKGQILMTFDDDETNKLNRSIEKERINLEKIQR DLNTTRELYKLGGASKDEVRNLEDSARITQLNIDEYVEVLSKTATEVRSPVDGVVSNLKA QENYLVDTDSSLLEIIDADDLRIIVEIPEYNTQTVKLGQSIKVRQDISDDDKVYDGEITK ISRLSTTSSMTGENVLEAEVKTNETIPNLVPGFKIKAVLQLKSDVKNIIIPKIALQNEEG KYFVYTLDEKNTIKKKTITIKNIVGDNIIVLSGLNPGEEIVLTPDNRLRDGLVLAEGDNH NSSEEVTSVPADKAKVIVN >gi|292606581|gb|ADGG01000029.1| GENE 13 9790 - 11055 1259 421 aa, chain - ## HITS:1 COG:no KEGG:FN0825 NR:ns ## KEGG: FN0825 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 12 420 1 409 410 505 78.0 1e-141 MASISSFSQESLTIDEALSRVGNNKESYEFKSFENTKEATDIRIKDNKLGDFNGVTISSS YNITENNFEDRDRKYDKTFQNKASYGPFFVNYNFVERDRSYVSYGVEKNLKDVFYSKYKS NIKVYDYQQELNKISYDKTIENKKINLVNLYNDILNTKNELEYRRKAYEHYKVDLDKFKK SYELGASPKINLESAELEAEDSKLQIDILKTKLKSLYEIGKTDYNIDFENYKLVDFIDNN ESIEKLLANYMEKDIAELKLNLSVAEERKKYSNYDRHMPDLYLAYERVDRNLRGDRYYRD QDIFSIRFSKKLFSTDSDYKLSELEVENLKNDLNEKIRLINAEKIKLKAEYYELSKLLSI ASKKSQLAYKKYLIKEKEYELSRASYLDVIDEYNKYLSLEIENKRAKNTLNSFIYKLKIK G >gi|292606581|gb|ADGG01000029.1| GENE 14 11102 - 11863 774 253 aa, chain - ## HITS:1 COG:no KEGG:FN0824 NR:ns ## KEGG: FN0824 # Name: not_defined # Def: DeoR family transcriptional regulator # Organism: F.nucleatum # Pathway: not_defined # 1 251 32 282 283 372 88.0 1e-101 MNYIFLNLNDKYKNFKGNPAIAEQSKEKSSIQFNLNKESSLIYYDVLRDNNAQNESEFMR SLLIRYATNPKNKRELFIFKESVERINLAIKDKKNVYITFNDNRKVKVSPYYIGSSDLEI ANYIFCYDFSEEKYKNYKLNYLKQVYTTSEGAKWEDNDYIEDVIKNFDPFLSKGQVIKVR LSENGKKLLKTIKINRPKLISEDGDLFEFEASDEQIKRYFSYFFDEATVIEPIELKEWFI EKYENALKNLKNK >gi|292606581|gb|ADGG01000029.1| GENE 15 11989 - 13791 540 600 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 183 596 24 424 425 212 34 4e-54 MVNGNTSGLKEHILNSLDELYNSKIEKGKIINQEIIDYIAEVSNKINREINIAMDRSGNV IDISIGDSSTVNLPVVPVYDRRLSGVRIVHTHPGGNPHLSSVDISALIKLKLDCIVSIGV SDEGVTGYEVAVCSILNDELTYDRTLVKNLDDFDYLDAIKEVEEALRKRNITEDDKEYAL LIGIDDEIYLDELEELASACDVEVVGKFFQKRSKPDPLFLIGSGKIQELALFRQIRKANL LIFDEELSGLQLKMIEEVTGCKVIDRTTLILEIFARRARTREAKLQVELAQLKYRSNRLI GFGITMSRLGGGVGTKGPGEKKLEIDRRVIKKNIAYLNNELENIKKVRNTQRERREESGM PRVSLVGYTNVGKSTLRNVLVDMFPNDKTLKKEEVLSKDMLFATLDTTTRTIELKDKRVV SLTDTVGFIQKLPHDLVESFKSTLEEVIFSDLIIHVADASAKDVIEQIDAVENVLTELNC MDKTKILLLNKIDNATKDNTYAMIEQKIDEIKAKYTNYQILIISAKNRFNIDELMTLIKD NLAVKTYDCKVLVPYSKMDVSAKLHRNVIVKSEEFVDEGVVMEVILNEKQYNQFKEYIVE >gi|292606581|gb|ADGG01000029.1| GENE 16 13806 - 14324 456 172 aa, chain - ## HITS:1 COG:FN0822 KEGG:ns NR:ns ## COG: FN0822 COG0703 # Protein_GI_number: 19704157 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Fusobacterium nucleatum # 1 172 1 172 172 259 85.0 2e-69 MKDNIALIGFMGSGKTTIGKLLAKTMEMKFVDIDKIIEATEKKSINEIFKEKGQIYFRDL EREIILQESSRNNCVIATGGGSILDNENVKSLQETSFIVFLDASIECLYLRLKDNTTRPI LNGAEDKKKLIEELLEKRKFLYQISANFIIHIDENTSIYETVDKIKESYINS >gi|292606581|gb|ADGG01000029.1| GENE 17 14504 - 16249 1740 581 aa, chain + ## HITS:1 COG:FN1819 KEGG:ns NR:ns ## COG: FN1819 COG4988 # Protein_GI_number: 19705124 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Fusobacterium nucleatum # 1 581 1 581 581 957 91.0 0 MIDKRLYNFSGNIKKYISITTFLSCVKLIANIFFYFIFAFLLVSLINKDFSFSYKYIIIS ILIIVLVRQFSTIKVAHMLGSLVVDVKRNLRKLIFEKTLKLGLAYSQLFKTQELIHLSVD NVEQLEVYFGGFLTQFFYCIVSSFILFFSIAYFNLKIAFILLLFSLAIPMSLYIILNKVK KIQKKYFAKYMNVGTLFLDSLQGLTTLKIYGTDEKREEEIAKMSEEFRVETMRVLKMQLL SIAVINWIIYAGTILAIITSIKLFIDGSLALFPMLFIFMLAPEFFIPMRSLTSLFHVAMT GVSAAENIISFIDSPEKNSIGDKEFKNEREFKVSNLSFTYPDGTQSLKGINMTFKKANLT AVVGHSGCGKSTLVSVLAGELKSNENEIFVDDTDIHNINLEDKVKNILKITHDSHIFSGT VRDNLSMANENLSDETMVEVLKTVKLWDIFSKAKGLDTVLESQGKNLSGGQAQRVALARA LLYDASVYIFDEATSNIDIESEEIILNIIHSLSKEKTVIYISHRLPAIKNADCIYVMDKG RVIESGKHNDLYAKKELYYNMYKHQEELETYLTKRGETNEK >gi|292606581|gb|ADGG01000029.1| GENE 18 16239 - 17921 194 560 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 352 546 2 197 245 79 30 5e-14 MKNRSTFNIVFNLLKLLDSLWKFMTIAVSTGVIGFIFSFCITLFGAYAFLSVIPTTKDSL KYVFLGGYSTQTYFYAMMFCGFFRAILHYLEQFANHYIAFHILANIRVKLFKIMRKLAPA KMENKNQGNLISMITSDIELLEVFYAHTISPVLIATITSIFLFLYFFQLNYLYALYMLLA QFIVGIVVPYIAHKRSAKSGVEVRAKLGKLNDEFLDKLKGIREIIQYSQGKKVLKKIDEI TSSLGENQKDLRNKASEVQMMVDSAIILLSIAQLLLSISLVSKGLVSIEASILAGVLQVG SFAPYINLAALGNILSQTFASGERVLNLMDEKPAVMDNVSLSSEDISERDDISIDNISYS YANTDNKILKDFSLKIKKGQLTGIMGASGCGKSTLLKLIMRFWDVDSGKIVLDKKDVKSI PLKELYQKFNYMTQSTSLFIGNIRDNLLVAKVDATDEEIYTALKKASFYDYIMSLPDKLD SIVEEGGKNFSGGERQRIGLARAFLANREFFLLDEPTSNLDILNEAIILKSLADEAKDKT VILVSHRESTLSICDKIFRI >gi|292606581|gb|ADGG01000029.1| GENE 19 18140 - 18649 566 169 aa, chain + ## HITS:1 COG:FN1822 KEGG:ns NR:ns ## COG: FN1822 COG0716 # Protein_GI_number: 19705127 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 168 1 168 169 280 89.0 1e-75 MKTLIIYSSETGNTKMVCEKAFEYVNGEKIIIPVKEKDSINLDEFDNIIVGTWIDKANAN SEAKKFINTLANKNLFFIGTLAASLTSEHAKKCFNNLRKLCSKKNNFVDGVLARGRVSED LQEKFTKFPLNIIHKFVPNMKEIILEADAHPNETDFLLIKDFIDKNFNN >gi|292606581|gb|ADGG01000029.1| GENE 20 18714 - 19184 459 156 aa, chain + ## HITS:1 COG:FN1823 KEGG:ns NR:ns ## COG: FN1823 COG1309 # Protein_GI_number: 19705128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 155 1 155 156 195 79.0 3e-50 MARKCAYTKEMILEAAIKLFKKEGSDAITAKNIAKELGCSVAPIYSVYMSLDDLKRDLAF EIEKNILEEKEIHPLLSKMLDKLEIDENDEEFSKKLKELKLKIHNKENQVNIFSQFSDFV SLIYKSRRTKFSKIKILELIAKHKRYITEFRNSKSN >gi|292606581|gb|ADGG01000029.1| GENE 21 19575 - 20144 601 189 aa, chain - ## HITS:1 COG:no KEGG:FN1315 NR:ns ## KEGG: FN1315 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 11 186 1 175 177 236 81.0 2e-61 MKKIVITFLFLISSVLSFATINDNLNILKDEDKVEINEKIEEIKKEKDLTVFVNTLSMDV GFAVSDPERALILNLKKSDKEIYKVELSFSKDIDIEDFQDDINTTLNDAAPFLERKEFGK YILTVLDGASSVLQEVNIEALNQMTMTKEQENASSTPIMIAAFVIIILFIVYKMYTAYKD KNNQKEKKN >gi|292606581|gb|ADGG01000029.1| GENE 22 20160 - 20936 878 258 aa, chain - ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 258 1 258 258 370 82.0 1e-102 MITRDIINILEKKFPKINAEEWDNVGLLVGDYDKEVKKIQFSIDASLEVVENAIKEKVDM IITHHPFIFKAIKSINEQDILSKKIRALIRNDINVYSIHTNLDSSVSGLNDYVLEKLGYT DYKFLDYDEEKNCGIGRIFKLDEEKDLKKFIEELKLKLQISNLRVISNDLNKKIKKVALI NGSAMSYWRKAKKEKIDLFITGDVGYHDALDARESGLAVIDFGHYESEHFFHEILIKELK ETNLEFLVYNPEPVFKFY >gi|292606581|gb|ADGG01000029.1| GENE 23 20933 - 21712 941 259 aa, chain - ## HITS:1 COG:FN1317 KEGG:ns NR:ns ## COG: FN1317 COG0568 # Protein_GI_number: 19704652 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Fusobacterium nucleatum # 1 259 15 270 270 304 77.0 1e-82 MTEEDFKKLVLEISEPLELALPEDRKLTDEEIDYEYIDLLVTETLENLKDDVCTCEKDCG IADCCGTRVEKNLKKVYQIALYMLRDGILYEDLTQEGVIGLIKAHELFEDDKDFKLYKDY YIARAMFNYIESYANYRKTAFKEYAEYEIHKENHPKISLKDKSKSEELKKLEKENKEKHI EEMKQLEKRAKYQFNYLNLKYRLAEREIEAISLYFGLDGHKRKNFSEIQSIMKIDNDSLD KIVKDALFKLSVVDEKVEL >gi|292606581|gb|ADGG01000029.1| GENE 24 21773 - 23275 2158 500 aa, chain - ## HITS:1 COG:FN1318 KEGG:ns NR:ns ## COG: FN1318 COG0568 # Protein_GI_number: 19704653 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Fusobacterium nucleatum # 192 500 23 331 331 469 96.0 1e-132 MKESTRTKDINIIRSEKGRDFITRVKEAGETTYEEINEELAADFPTEDIEGLINTFLDEG IKILNKTKKKTKTKTKTEAKDETKTKSKSKTEVKKETKTKAKSKTKSKTKENEDLEEEKE LVTKVVEEKTKIKFEEKELDDDKELDDDKELDDDERDEDEENEEKELDEEYVEDSLEEEE EKDEDDIDSDTFIDFGDEFNPDYIEDINEEELSNEKLLNLGNSAKVDEPIKMYLREIGQV PLLTHDEEIEYAKKAYEGDEEASQKLIESNLRLVVSIAKKHTNRGLKLLDLIQEGNIGLM KAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIKKESRIYLQE TGKDASPEILAERLGMEVEKIKAIQEMNQEPISLETPVGSEEDSELGDFVEDQKTTSPYE ATNRAILREELDGVLKTLSPREEKVLRYRYGLDDSSPKTLEEVGKIFNVTRERIRQIEVK ALRKLRHPSRKKKLEDFKVD >gi|292606581|gb|ADGG01000029.1| GENE 25 23306 - 25111 1945 601 aa, chain - ## HITS:1 COG:FN1319 KEGG:ns NR:ns ## COG: FN1319 COG0358 # Protein_GI_number: 19704654 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Fusobacterium nucleatum # 1 601 1 603 603 773 72.0 0 MYFRNEDIEKLLDSLKIEEVVGEFVDLKKSGSSYKGLCPFHADTNPSFSVKPEKRICKCF VCGSGGNAINFYSKIKNIPYMEAVKELAQKYRVNIKEHNAKNIDIDNEKFYQIMEDSHNF FIDKIFAQESRTALNYLANRGLDTDLIKEHRLGYAPAKWSELYEFLKEKNYSDEDLLTLG LIKKNEEGRIYDTFRNRIIFPIYSISNRIIAFGGRTLEKDNSTPKYINSPDTPIFKKGKN IYGIERAVNIRNKNYSILMEGYMDVLSANIFDFDTSVAPLGTALTVEQAQLIKRYSSNIL LCFDTDKAGKTATERASFILKSQGFNIRVLDFENAKDPDEYLRKNGKEAFLEVVKNSLEI FEFLYELYSSEYDLTNIIAKQNFIDRFKEFFTCLTTDLEKEVYLKNLSEKIEISADILRK TLIEKNKKKFVINDYTEKKEELLEKKEFKKANNLELSIVEMLFKKPEYYEFFKNEKLESD IGNKTLKFFEEKIKENFKIESNTLMREFEEYIKNDDNCSKDTKEDIARIILNYAVNLDEE KEQKKYIELFKSYFRIKIKLRDKTKDDFQTKIYFSKFKVKIEETQSAEEFIEVYNSFRYL F >gi|292606581|gb|ADGG01000029.1| GENE 26 25170 - 26861 2122 563 aa, chain - ## HITS:1 COG:FN1320 KEGG:ns NR:ns ## COG: FN1320 COG0760 # Protein_GI_number: 19704655 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Fusobacterium nucleatum # 208 563 1 356 356 473 76.0 1e-133 MSIRKFRKQMKPFIIVLTVIFILSLAYGGYESFRTSRANKKAQEAMLLNKDYIQKIDIER AKQEVSRAYAETVDKDIVDIIAFNDVIDKKLTLDLAKSLKVKVPSSEVNAQYEELESSMG DKEQFRRMLQVQGLTKDSLKNKIEENLLMQKTREEFSKNINPTDEEINAYMSLYSIPSDK KEDAISLYKMEKGEEAFKLALIKARKEMQIKDLAPEYENLVEKVSYEEDGFKVTNLDLAK IMATFMINQKATKEQAEELAKNMLAKQIKVAKMAKEKGVKVNEELDLMSQLQEYTVGLSE KLREEIKPTDAELESFFNANKSRYNIPETADAKLIFITVKSTKEDDAVAKAEAEKLLAEL TPENFSEKGKSIGNNQDIIYQDLGTFGKQAMVKEFEEALKDVPSNTVINKVIKTKFGYHV VYVKKNDNNQQWSAEHILIVPYPSEKTVEEKLEKLNKLKADIEAGTVALNNKIDEDVIQS FDAKGITPDGIIPDFIYSPEIAKAVYETPLNKVGIINPNKATIIVFQKTKEVKAEEANFS NLKEEVKKDYINIQVGEYMSKLF >gi|292606581|gb|ADGG01000029.1| GENE 27 26886 - 28271 1900 461 aa, chain - ## HITS:1 COG:FN1321 KEGG:ns NR:ns ## COG: FN1321 COG2204 # Protein_GI_number: 19704656 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Fusobacterium nucleatum # 1 461 9 469 469 768 94.0 0 MKNAILAISEKKEILKQIRKELAEKYEVITFNNLLDAIDMVRESDFDLVLLDNALEGVTV GEAKKKLASIGKEFVTIALVDEVNAETTKELENSGIFAYLLKPIKVEDLDAIILPSLNGL ELIKENKRLEEKLAVLEEDTDIIGQSAKIKDVRNLIEKIADNDLPVLIVGETGTGKDIIA KEIHKKSERNKGRYAQISCALYPGELIERELFGYERGAFMGANASKKGLLEEIDGGTIYI EDVSKMDIKIQSRFLKAIEYGEFKRVGGTKVRKTNVRFLVGTDIDLKQETEKGKFRKDLY HRLTALTIEVPPLRERKEDIPVLANYFLNKIVRILHKETPVISGEAMKFLMEYYYPGNIM ELKNLIERMALLSKDKILDVDQLPLEIKTKSDIVENKTVVGVGPLKEILEQEIYSLEEVE RVVIAIALQKTRWNKQETSKILGIGRTTLYEKIRKYGLDTK >gi|292606581|gb|ADGG01000029.1| GENE 28 28361 - 29380 1165 339 aa, chain - ## HITS:1 COG:FN1322 KEGG:ns NR:ns ## COG: FN1322 COG0750 # Protein_GI_number: 19704657 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Fusobacterium nucleatum # 1 339 1 339 339 521 83.0 1e-148 MTFLIAVAMLGLIIFVHEFGHFLTAKLFKMPVSEFSIGMGPQVFSLDTKETTYSFRAIPI GGYVNIEGMEVGSQVENGFNSKPAYQRFIVLFAGVFMNFLTAFLIIFLIAQMSGRMEYEE KAIIGALVKGGANEQILKVDDKILELDGKKITLWADIPEVTKEALDKKEISALIERDGKE EKLVLKLTKDEENNRVVLGISPKSKKINLSFSESLIFAKNSFISILKDTVGGFFTLFSGK ANLKEISGPVGILKVVGEVSKFGWTSIASLAVILSINIGVLNLLPIPALDGGRIIFVLLE LFRIKINKKWEENLHKFGMVVLLFFIVMISVNDVWKLFN >gi|292606581|gb|ADGG01000029.1| GENE 29 29436 - 30110 851 224 aa, chain - ## HITS:1 COG:FN1323 KEGG:ns NR:ns ## COG: FN1323 COG0125 # Protein_GI_number: 19704658 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Fusobacterium nucleatum # 1 223 1 223 225 363 91.0 1e-100 MGKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTD ATKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDIEAKDE YLNWLVDLEYKKNEIPEPDIVIFLKMPTNKAKELMENRKNKIDGSEKKDIHEVNEDYLKK SYDNATAISKKYSWCEIECVENNKIKTIERINDEIFSKIEELIK >gi|292606581|gb|ADGG01000029.1| GENE 30 30098 - 31261 1482 387 aa, chain - ## HITS:1 COG:FN1324 KEGG:ns NR:ns ## COG: FN1324 COG0743 # Protein_GI_number: 19704659 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Fusobacterium nucleatum # 1 387 4 390 390 637 84.0 0 MKKILILGSTGSIGTSALELIRNNREEYQVVAISGNRNIELLKKQIEEFKPLAIYVGAEE EAVKIKNEYSFIEDIYFGENGLAELAKNSDYDIILTAVSGAIGIDATVEAIKREKRIALA NKETMVSAGTYINRLLKEYPKAEIIPVDSEHSALFQSLQGFKKENVKKLIITASGGTFRG RTLEFLENVTVEEALKHPNWSMGKKITIDSSTLVNKGLEVIEAHELFNVPYDDIEVVVHP QSIIHSMVEYVDGSIIAQMGVPSMKTPILYAFSYPEKEFNNSIDFLDLIKTKTLTFEEAD RKVFKGIDLAYRAGRTGKTMPTVFNAANEVAVELFMKKKIKFLDIYRIIEEAMDSHKLIS LDTDEALSIIKKVDKETRRKVREQWER >gi|292606581|gb|ADGG01000029.1| GENE 31 31279 - 32160 1052 293 aa, chain - ## HITS:1 COG:FN1325 KEGG:ns NR:ns ## COG: FN1325 COG0575 # Protein_GI_number: 19704660 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Fusobacterium nucleatum # 1 293 1 294 294 372 75.0 1e-103 MFKWNRVLVALIGVPLLFFVYMGEAFFHMSLQGLPMLIFTNLVVAIGTYEFYKMVKISGK EVYDKFGILVSIIIPNLIYLANRSKYLDQSMVGLVIIIATMSLLIYRVFKNQIKGTLEQV SFTILGIVYVSVFFSQIINLYFIGAIFPFVLQVLVWVSDTAAGIVGVAIGRKFFKNGFTE ISPKKSVEGALGSIIFTAIAFVLFVVYFEKIKDISLEEGIVAFLIGAFISVIAQIGDLIE SLFKRECGVKDSGTILMGHGGILDRFDSMILVLPFVTVLIYLFHLYISYQYGI >gi|292606581|gb|ADGG01000029.1| GENE 32 32153 - 32845 905 230 aa, chain - ## HITS:1 COG:FN1326 KEGG:ns NR:ns ## COG: FN1326 COG0020 # Protein_GI_number: 19704661 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 1 230 1 230 230 406 92.0 1e-113 MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFST ENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETK NNDKITLNIAFNYGSRAEIIDAVNDIIKDGKENINEEDFSKYLYNDFPDPDLLIRTSGEM RISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGVKNV >gi|292606581|gb|ADGG01000029.1| GENE 33 32968 - 33330 368 120 aa, chain - ## HITS:1 COG:no KEGG:Ctu_00950 NR:ns ## KEGG: Ctu_00950 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 2 119 5 124 128 67 36.0 2e-10 MKTKGENILTFKDENNGDQITMYYDIWLTVIREILMKYADKTYAESLKILNKHYYKKPTN YFECIYLSHELEYHWAMIGAYGERYWLNDDCSELLPTDYYEWYKKFLDENNFNEPFEFYG >gi|292606581|gb|ADGG01000029.1| GENE 34 33399 - 33614 202 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELYSFLLKKNTTVIGDTLFFKFPSPYGVSFIIILKKSVYEQIKWAMFPSPYGVIFILTC KCFSWNVCGSY >gi|292606581|gb|ADGG01000029.1| GENE 35 33553 - 33747 175 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782683|ref|ZP_06748009.1| ## NR: gi|294782683|ref|ZP_06748009.1| hypothetical protein HMPREF0400_00663 [Fusobacterium sp. 1_1_41FAA] # 1 64 1 64 64 92 100.0 1e-17 MELYSFLPVNVLVGMSAEVIKEFPSPYGVSFILIRYFQVFLGLKGEVFPSPYGVSFILIL LQIL >gi|292606581|gb|ADGG01000029.1| GENE 36 34451 - 34600 89 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPYSFRLLAEYYSYMKLFTFLINHFETLFPSPYGVSFILMEESYTMSLE >gi|292606581|gb|ADGG01000029.1| GENE 37 34648 - 34827 94 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782684|ref|ZP_06748010.1| ## NR: gi|294782684|ref|ZP_06748010.1| hypothetical protein HMPREF0400_00664 [Fusobacterium sp. 1_1_41FAA] # 1 59 1 59 59 97 100.0 2e-19 MEVRAFIMSQLIEFPSPYGVSFILMKDFEISSAQACRNVSVSLWSIIHSYLMLVYINTF >gi|292606581|gb|ADGG01000029.1| GENE 38 35120 - 35449 365 109 aa, chain - ## HITS:1 COG:MT2883 KEGG:ns NR:ns ## COG: MT2883 COG1343 # Protein_GI_number: 15842357 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Mycobacterium tuberculosis CDC1551 # 22 107 28 113 113 68 40.0 3e-12 MENWDFLDEDFEKEIFEDNFTVIVIYDIISNKRRMQLSKLLSAFGFRIQKSAFECLLTRE KYKLLIERISRYVKSEDLIRIYRLNQNVVTEIYGEKSEVENENKTYYFF >gi|292606581|gb|ADGG01000029.1| GENE 39 35454 - 36461 1091 335 aa, chain - ## HITS:1 COG:alr1468_2 KEGG:ns NR:ns ## COG: alr1468_2 COG1518 # Protein_GI_number: 17228961 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Nostoc sp. PCC 7120 # 1 333 2 332 335 216 33.0 4e-56 MSNLYIYEQGIVLRYKENRLLITYANDDSKSIPIENIDNVVIFGGIQLSTSCIHNLLAKG IHVTFLSKNGSYFGRLESTSNINIDRQREQFRKSDDKEFCLEIAKKFIKGKGTNQRTILI RANKELKNEVLATTITTMFGIIKDINDTKTIEELMGIEGYLAKLYFNALNHIIDKKYSFK TRTKRPPKDPFNAVISFGYTLLHYEIFTILVTKGLNPYAAFLHSDRHKHPALCSDLMEEW RSILVDSLAIALLNNNKIAYEDFDFDEESGGVFLNKKACEKFVEQFEKRLRQEVSYIKEV PYKMSFRRIIEYQVMLLIKALEANNADIYNPVLIR >gi|292606581|gb|ADGG01000029.1| GENE 40 36475 - 37866 1450 463 aa, chain - ## HITS:1 COG:no KEGG:TherJR_2016 NR:ns ## KEGG: TherJR_2016 # Name: not_defined # Def: CRISPR-associated protein Csm6 # Organism: Thermincola_JR # Pathway: not_defined # 1 458 1 452 460 159 28.0 2e-37 MSKKVLLTFAGNTDPTRGEHDGPIIHICRYYRPDKIYLILTKEMEEKDEEVNNIYERAIK ENLKGYEPEIIKIKTGIEKAHHFDAYFDVIYQTFEEIKKEECIEVYLNMTSGTSQMTTNL LMYYMDSIDLKLIPVQVATYTGQSNQTKENNKTVDKAYDIEAEAICNLDNEEKTRTCRIE KPDLRKYSRILTKNQIEKLLEQYKYEAISALLKRNIFDKNLELNTLVNFAIERTTLKGLD TNKKLDFLDNKDYNKLYYFTKDKTVSKIPEWYQIVDYFALANIKQKTEDISSYILMLEPI IVKIYLSILKDIMKKDLDELFRKDSHGYKIELKRLEEDLKEMIKEDLNREYLKNDVYISA QTLASTIKYYLKKEKKLANIMDVDYFISLAETLAKMKSVRNTLAHELKSISREDFNKESE TTVEQINSKILDFFNKFYTPLGYKKEMIEIYDNINREIVKLLI >gi|292606581|gb|ADGG01000029.1| GENE 41 37859 - 38581 528 240 aa, chain - ## HITS:1 COG:MT2891 KEGG:ns NR:ns ## COG: MT2891 COG5551 # Protein_GI_number: 15842365 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 5 240 62 302 314 77 22.0 2e-14 MLAQINMELEAVGLNVNMASLFHGYLMENIDPAYAEYFHYNMTNPFTSCIFKDTKEDKYF WRITTFSQKAYDMIMSYFSKEIPEKIYLKNKDLEINVKSFSIQKKSYEDLFLEATERKRI KLISPTSFKSEGVTHIFPNISTLISGVITKINQHSETTELEDKKIVDELLEKVYIKDYNL RTKIFHLESIKIKGFIGTMDLAIKGEDRSLINILNFLILMSEYTGLGIKTSLGMGGVKVE >gi|292606581|gb|ADGG01000029.1| GENE 42 38565 - 39731 1208 388 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1802 NR:ns ## KEGG: Vpar_1802 # Name: not_defined # Def: CRISPR-associated RAMP protein, Csm5 family # Organism: V.parvula # Pathway: not_defined # 1 377 1 389 391 100 28.0 7e-20 MSNIIKYKMKLEVLTPLHIGGADYKSKLDKKEYVFDKENGELTLIDSEKFISFLIKKNLF DEYIFYIQKNLNLKKNEQDKNIKLIDFLKNKDIYKNIEEFRKKAPFRVNPEIEEMNDIKL MLRNFQGKPYIPGSSIKGALVNFLLVNYIINNRDKFKVEKNRILEIAKKFNNDNDIKRAK NDIKRIVNEIEKSIIFGNNKELEKSKRFGLSVSDTYNYSNTRTNFYGDIDEKRDTSKEEK EQAMPVYREYIMADSIFDFDITLDIDLMQKSKFKIKNIDGLISSIESAISYLIDVLEDKN SPRTENLILGANTGFLQKTIVYALFEDEKERLEVIKKLLHTKKGDKIKDHLNDKFAPRVL NRIKINNKNLLAGLVKIMKVEEKNVGTN >gi|292606581|gb|ADGG01000029.1| GENE 43 39728 - 40732 978 334 aa, chain - ## HITS:1 COG:MT2887 KEGG:ns NR:ns ## COG: MT2887 COG1567 # Protein_GI_number: 15842361 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 332 1 297 302 119 26.0 6e-27 MSYLLYKLRFQNGIHVGTASGNTLEETMMSVYSDTFYSAVFNEYMKIYNDDELYKISEAG EFLVSDLLPFKEKEDMSTDFYLPKPFISVQRQEIEKNEEEVVDRKKVKATNFIPADKLGE YLTFLKTGKNFPEIDDDFGKKELYTKNKVSLQNEDTKLYNIEVFKFNEKSGLYFIVKIPE DNRWQEIFQGVLDSLALTGIGGKRNSGFGQFRREEPMFFDGETFDAIESESDAYINRGLY SDEKNFLSLSSYSPKKEEIDKIKESENYYQLIKRSGFVNSSLYSEQAEKRKQVYMLSSGS VLTFKPEGKILDLNLHGKHSIYRMGKPIVLGVKI >gi|292606581|gb|ADGG01000029.1| GENE 44 40732 - 41439 951 235 aa, chain - ## HITS:1 COG:TM1809 KEGG:ns NR:ns ## COG: TM1809 COG1337 # Protein_GI_number: 15644553 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Thermotoga maritima # 6 224 7 231 247 159 42.0 5e-39 MYTLKGKLLIKGTIKLITGLHIGTSGDFSAIGAVDTIVIRDSVTNKPMIPGSSLKGKMRY LLARTKYHSSLELEDIKKEDICIKRLFGSSDPIMTSRLQFQDILLSNKSIEEFKEFEFDL PYTEIKYENTIDRTKGVANPRQLERVPAGSEFDFQIVYNVENPKEFEEDMKNILLMMDVL EDDYLGGHGTRGYGRIKFKNLSLELKTYTEENKKELVTIEKEIEKIRKELESKVE >gi|292606581|gb|ADGG01000029.1| GENE 45 41476 - 41835 424 119 aa, chain - ## HITS:1 COG:no KEGG:TherJR_2021 NR:ns ## KEGG: TherJR_2021 # Name: not_defined # Def: CRISPR-associated protein, Csm2 family # Organism: Thermincola_JR # Pathway: not_defined # 8 116 11 121 125 67 41.0 1e-10 MNNINVQEKIEKYQEDKKNTVTTTQLRLLLSNAVIIKNKIQVETRTKKGDEISEKLENEI KYLLVKHIYQCGREPKVKRFDNEFYISEKIKEIGRSAKKFNEFYRYLEEIVAYMKYYES >gi|292606581|gb|ADGG01000029.1| GENE 46 41839 - 44379 2346 846 aa, chain - ## HITS:1 COG:MT2890 KEGG:ns NR:ns ## COG: MT2890 COG1353 # Protein_GI_number: 15842364 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HD superfamily (permuted catalytic motifs) # Organism: Mycobacterium tuberculosis CDC1551 # 1 846 6 814 817 404 32.0 1e-112 MDEKLICLQLGALLHDIGKIVRRAGLDKNEYSIAGSNYLKENNLLEEKYKEVYNIMNYHH KKYLSSAKLKEDSLAYIVYEANNIASGMDCEKYEDEGTKGNEMDNLNSIFNVVKEEKNNI KKTFKFFDFDRNNFNMPTSHAIKLTNSDYKKVLDYIQKKLSSFKENLNPEKLAIILEVCC SYFPSSFYVDTPDVSYYDHVKLTAAVAACFYLYDKEKGTKDYQKEYFSKANRNIEKFLLV SGEFSGIQNFIYTISSKMAMKSLRGRSFYLELFAEHIIDEILSELELSRVNLLYSGGSHF YLLLPNTEKSKEVLEKYKEKINSFILEKIGATIYFEMVYSETSAEELGNGLSKDIKDENK IGELFRKTSAKVSKAKLNRYSLDQLKELLDEDSFINKVKSYTKECNICKKPEDEKILERN TKYFDEEAGVELCNSCKSYIDLGKDISRLYHSSNESFIVEENCEENENALIFPKYSKSCV KILIKSKEYILRNINKIHRYYAINSNSIGDRFCKNIWVGNYNVMNKDATIGENLIEFKEL VKKAKGIERLAVFRADVDNLGTLFQSGFENKNSKEPYKNVTLSKSVVLSRYLSDFFKRKI NLILEKKDAIKDTNELFKKYCDIICEGNSNPRDIVIVYSGGDDIFAIGTWNDTIEFAIDL RTAFKEFTNDKITLSAGIGFFYENYPIHQMAEKTGNLESLAKANKNSSGEIIKDSVALFG EMSPELNHIYTWDIFIDKVLNEKYKFIKSVTVLNEEDKEKYKDRIVIGKSKWYKLMDLVV SRLTKNANKLDIARFAYILGRINHTTNNKENYDKFKKNLLLWLKNKEDAKQILTAINILI YQERGE >gi|292606581|gb|ADGG01000029.1| GENE 47 44699 - 45499 819 266 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1194 NR:ns ## KEGG: Lebu_1194 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 183 266 90 174 176 65 38.0 3e-09 MNDNDDLKQELNNENIEAPKTNDVTPTTIIPVVQDELKSNNQAKKTNINMAPKKKSGMKA GTKTQLIILAVTLLFWIFLASSLIHFIRNIGRGLKKPKTYYTQVNYDTNQVAPQVQTTVV EPITTTEVAPPVENTPVTTVPEPVNNTNVPQSIPETNNNVASQQNTVNQVQNTQQYSAYD DYDLQVLEQVYDEVINRGNESYLYNFSSSELAIIRNTLYARRGYRFKKKKYQQYFGSKPW YTPTTDSQNILPKNEERLANIIKKYE >gi|292606581|gb|ADGG01000029.1| GENE 48 45706 - 47004 1126 432 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 429 23 450 470 294 40.0 2e-79 MYRKIFEYLKEWKNSPYRKPLIIQGARQVGKTYSILNFGKSEYENIAYFNFETNPKLKET FEENIEPSYLIPILSRLVNQTIVKEKTLIFFDEIQLCERALTSLKYFQEQAPEYHIIVAG SLLGVAVNRENFSFPVGKVDIKTLYPMDIEEFLLAMGEDELIRQIKTSFNKNSPLPIILH ELAMEYYRKYLLIGGMPECVAKFKETENYTLIRHTQEMILLSYLNDMSKYNTNNEIKKTR LVYDNITVQLSRENTRFQYKLVKTGGRASEFENAIEWLNLSGIISKIYCVQDIKKPLENY RNIDAFKIYISDVGLLCAKKQIVPEDILYLSDELNDFKGGMTENYVNIHLDINSYTPYFW KNEKGTSEIDFVIVRDGKIIPIEVKSSNNIRSKSLDYYIKTYKPEYSIRISSKNFGLENN IKSIPLYAVFCL >gi|292606581|gb|ADGG01000029.1| GENE 49 47068 - 47826 1150 252 aa, chain + ## HITS:1 COG:FN1343 KEGG:ns NR:ns ## COG: FN1343 COG0084 # Protein_GI_number: 19704678 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Fusobacterium nucleatum # 1 252 7 258 258 457 92.0 1e-129 MKIIDSHVHLNLHQFDSDREEVFKRIEEKLDFVVNIGFDLESSEKSVEYADKYPFIYAVI GFHPDEIEGYSDEAEKRLEELAKNPKVLAIGEIGLDYHWMTRPKEEQFKIFRRQLELARR VNKPVVIHTREAMEDTINILNEYPDVKGILHCYPGSVESAKRMIDRFYLGIGGVLTFKNA KKLVDVVKDIPIEHLVIETDCPYMAPTPYRGQRNEPIYTEEVAKKIAELKNMSYEDVVRI TNENTRKVFKML >gi|292606581|gb|ADGG01000029.1| GENE 50 47823 - 48191 579 122 aa, chain + ## HITS:1 COG:FN1342 KEGG:ns NR:ns ## COG: FN1342 COG0736 # Protein_GI_number: 19704677 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Fusobacterium nucleatum # 1 122 1 122 122 179 85.0 8e-46 MIVGIGNDIIEIERVEKAISKEGFIAKVYTQREIENIVKRGNRTETYAGIFSAKEAISKA IGTGVREFALTDLEILNDDLGKPYVIVSDKLNKIIQRKKENYQIEIAISHSKKYATAMAI II >gi|292606581|gb|ADGG01000029.1| GENE 51 48390 - 49316 1128 308 aa, chain + ## HITS:1 COG:FN1341 KEGG:ns NR:ns ## COG: FN1341 COG1186 # Protein_GI_number: 19704676 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Fusobacterium nucleatum # 1 308 1 308 308 540 94.0 1e-153 MNFEKNIVSRYEKLATEVEDEEVLIDFVESGESSFENELIEKHKTLKYDIEEFEVNLLLD GEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVT FLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIR IDTYRASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIEL KKKEEEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINS YLRWIKNN >gi|292606581|gb|ADGG01000029.1| GENE 52 49445 - 50029 669 194 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782699|ref|ZP_06748025.1| ## NR: gi|294782699|ref|ZP_06748025.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 194 1 194 194 328 100.0 1e-88 MKEIKARPLDENNKEGKMFAYIFFFQPFLTLAMAIFMISLNKEIFKNNLAAQLIMGVFFL LAISSFFTNMPYIANGIFAEEVCYVKNKVFYYTKTRNFLGIKKIIKSFEIPIREITDVKE NEKKLKVNMFSIFKPRNSVEIETRDGIKYAIMNDFHLGSKNDTNTETREERAKRIFNEVK DLITEAKNENTFNI >gi|292606581|gb|ADGG01000029.1| GENE 53 50038 - 50625 465 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782700|ref|ZP_06748026.1| ## NR: gi|294782700|ref|ZP_06748026.1| hypothetical protein HMPREF0400_00680 [Fusobacterium sp. 1_1_41FAA] # 1 195 1 195 195 353 100.0 5e-96 MKRKELKISPVPEDSKFYYIYAHILLLWPFAPIIIALVIFSSVGDETRSKIMEEFMKEKV LLTLVIIAFLISTLNMFRELFNYLIVEEVCYVDKKTFFYQKFRRAFGMRKLMTNLEIPFS DISEVKDGKKPSFLYYFFSPIAHRNSVEIVTTDGKKYQIMNSVLFGSRNSLKPNSKVTDD RTTKIYNEVKNMILK >gi|292606581|gb|ADGG01000029.1| GENE 54 50709 - 52241 2331 510 aa, chain + ## HITS:1 COG:FN1340 KEGG:ns NR:ns ## COG: FN1340 COG0008 # Protein_GI_number: 19704675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Fusobacterium nucleatum # 1 508 7 514 516 962 93.0 0 MCVDCKKRVRTRVAPSPTGDPHVGTAYIALFNIAFAHVNNGDFILRIEDTDRNRYTEGSE QMIFDALKWLDLDYAEGPDVGGEYGPYRQSERFDLYGKYAKELVEKGGAYYCFCDQERLE NLRERQKAMGLPPGYDGHCRSLTKEEIEEKLKAGVPYVIRLKMPYEGETVIHDRLRGDVV FENSKIDDQVLLKADGFPTYHLANIVDDHLMGITHVIRAEEWIPSTPKHIQLYKAFGWEA PEFIHMPLLRNDDRSKISKRKNPVSLIWYKEEGYLKEGLVNFLGLMGYSYGDGQEIFSLQ EFKDNFNIDKVTLGGPVFDLVKLGWVNNQHMKMKDLGELTRLTIPFFVQEGYLASENVSE KEFETLKKIVAIEREGAKTLKEIAKNSKFFFVDEFTLPEVKEDMDKKERKSVEKLLNSLQ DEVGLKAIQLLIDKLEKWESNEFTAEEAKDLLHSLLDDLQEGPGKIFMPIRAVLTGEPKG ADLYNVLYVIGKERALKRIKDTVKKYSIKL >gi|292606581|gb|ADGG01000029.1| GENE 55 52726 - 53247 732 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782702|ref|ZP_06748028.1| ## NR: gi|294782702|ref|ZP_06748028.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 173 1 173 173 165 100.0 1e-39 MKKIVLFSLLAISVLSFASEKSAEQIMDELREKITKREEAKLREEQEKLRREEEARKEKE LLEAKQKEANEREAMKLLKEKRRQIIEEPLEEKYIRGEDKIKAYEKAIETAESRMSFKEV KNSEDPVVKEYRTNVSKKYNDANEELQKNLAVKEQIEEQLKSLDELERKVKSW >gi|292606581|gb|ADGG01000029.1| GENE 56 53259 - 64178 14049 3639 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0989 NR:ns ## KEGG: Sterm_0989 # Name: not_defined # Def: outer membrane autotransporter barrel domain protein # Organism: S.termitidis # Pathway: not_defined # 7 3639 9 3685 3685 1627 37.0 0 MNKQELEKSLKRFLKRKLSYTLSLLISFLITGGFAVASELNKEDLLSRIKEDRVRLEQML KENSKERANLQKNYLDVLKEADFYVKPNKGSLFSMQYFNKRVKHVDIEWQGSVREATDHD SDREKFNSLQKGNNQLSEAGRYTYRSSKLSSGWVNKNTNYGSNANAYDVESKLFILPVVK APVVNTPSAPNVTFTPPTAQQELKIVTPAKINIQMGTITVTAPTVTAPTVTVPSTIATPT LATVTVNEPNVAINIGSINVAGPTGLTLPSLTPPTVNVTTSVLIPEGIKTPELSVNPPES PAAPSFEVFSRGRGGSWLGGAWGSDSNTSFHAYHEGFNNFDPQVTMDSGVPGQLKDFINE APMFNLSGVIYGNNKATAEIVATSTVTKVDNHYKNIASTTATRNLWGNDAYTLRATPGAT ITFSPHSFPAVAANTYVSNTDTRPLRYQHTWIFQGSPALVKDMTITIGGARTAGTTIFAQ TPTAKLDNVDINLKGYAQVANLESEVDHSLSLNSVNINMENKKNTLVSISSVTINAHGYN NQDHRNTTSGWGAYQGDRGTGASTGINLGTTNLTIKSQESALYYIRHTDTHRWWGSNNLY SASAAANAQKYEINPGKYRMYYPSPGNTTFKNEGTIQFIGDGNVGAWIANYAPNRQQIKQ YSGTTLQNITGAVRPTLKLGALVKMQGDNNTAYYFASHPNMPNHNGVFEGDVKVNVEIGT SLGTAGTTQNIGDSIGNPNKSEKNVAVFVASGQRSEMTTKVLNGFNQYYPASLSSKITNI DLYNGRVGDLNGDGVVDTNDYRIWGINTSSAHPAYNNIGAYQLGENGNVYATVNDFDLSD FSVKFGKYSKNSIGVVAKNGTVINLGKNTTISDSADPGAEDNIMVYAEGVWFNPRLKWSN QPIDAGTYGEEAYRRGESVTGQQNISDFNTTVKLKQGITMGSIKSTALFAKDGAKIDGSG KDVTMNGYGSKAVIAYGTKNYSDIVDSNNANANEQPDTIVNVANIIAKTNGPAPDNINTN IAAVAISQEGALKGKGDVQVNVSGKVDVYGVGAYAKGDKATVTIGGTNSYILTGSNSGLV ATSGGTINFGGGTIDHKIDKQVPFYSENASKLNFKGATTVNMYKGIAFYGAASDFTAATT GTSLYNGMSNVTVELKDNGVNLGVFKGANLTWKGNTDTTYVNGIKNIPHVYAINTGTYWY SSSLENGSLTVETDVDRDNISSGATRGDGFNDIQMERERVILQAGKTIKSLAGSGLILAS NKNATSNTESGYTIKNGTVNISNGANPTTGAYVNFGHIVTEKTATDEGIIKVSKGVAAYG VNGSKIQNEGTVNVASSDASNPGVGIMLLAKTDGKTETYGIANNKAAANSKWMEIVNKGT IDITGTNAIGIYAKNNHTAAATRALSTIYNEAPIELGDQGKAIVVQTTNTEGATLTLKDS GRTTTSQDIKVGKEGIGVYAEYSDVKFDGNYGIVIEDDGIAVQAKGVGKIEKTGATDKLN VEYKGAAAKTAMALAYTGVLNTDTFTNDINLNLTNTGNAKTLVGIYASGLGTLTNNGDIT VEYDGTYGILSKGVDIVNNGTIKVGKTTSTDSDALGIYVENAGLTTNGDKLKVQGHGGTN NKPIGIYVKENAATTNKVITINQGTDAMKVEGKKGLGLYLDGNSGDKLKLVNKSDIELTA STASADKRIGLVLKAARNTGNLTSGKIVVKKNNIGIYNENSMLTHQGTLEVKHSEDSTTN IGIHNKAAGNNFVFKVEQTPTNPGLVDVEGHAGTVGISVETDGANTGTVTLTDAEIKVKA TNMAAGKIPLGIYAKGNKININSTSSGSTFTVSPNAVGIYLEGDNTSKVSGSHKYSLSSE NTADRLGIGTYFKGGSYATTTTTEKIEIESTQTKSNSDGPIRPIGLFYGQGSTKNEANLE ILSTSNEVIGMYGKNLTLTNTGKIDVGAKGIGAYFAGTNLTNKGEVNVTAAGAYGLYLNG GSSNTQAKITVSGKDAVGVLITGKNSTFENKAPNSIISKGDNSIAVYVEKDAEFKNSGKV TSEEVSSKSIGIFADKAKVTNVSNATIESKNVGIYAKTSSTVNNAGKITIVDGSGIVATD KTTVNLNASGLINSTATKANGVIATNKTTVNLSGTNISLTGNKSTGIYSDNKSTVNLTSG NVTIGQEGLGLYTNNGTVNLTSYTGTFSLGNKSVGIYSKASTVNGGTLKVAYNNTDMGVG IFYDGGTITNNTVVQHTGKNLVNVLSKGVTLTNTANQNIQENSIGVYAVGGEVTNSGTMT LTGDKSVAFYLDNGAKLKAIGTINGTVPSNYKVGVYAKNGKIEGTGTYNFAVDNGVAMYL DNNGVNDFKGTLNMSADSLSGKRAVGIYTTPSTTARNINTNINVTGKDSIGMLLSGNATT GSTVNYGGTLDISGASSNKYGIGAMVQQNSVFNLTSTGKVKIGGTNNIGFYVKQGGTLQV TGGTVENTKDGTFAYLENGNLDFKAGTVPNINYLNVSVSGASGLIKNSTSISVGTSGLQA TDGAKILNTSVGTINGKVDNAKALVGIGAGTNITNQGTIKLTGKESVAMYLNDNAIGTST GSVEVGKNSVAYFVKDNGLINVSGTTKIGKDSSVFYINKGRVNYTGKDIVLPDSTTGVTL IGTNPGVVAANFNGKSMTVGEKATGIYITGQATVDNNTIQNLQKINVGKLGNGIYINNNN PFTTNTTLEITGEEGIGIYSTKNGNLTYGGKIDSTVAKAKGIVHTGAGDTINNGVIKLTG DSSIGAYAKGGNLLENTNKIEIAKGTSSATAVGLYGLNQTTVKNSGSIKLLESSIGIYGE NTAVINTGSILNSGKNNNGIYAKNSDVTNTGPITLGDSSNGIFATSTGVKTITNSGNITV GNTNSAGIFGAGKTGINNLGGNITVGKESVGLATKEGNITVASATNFNVGESSTYIYSQK GNVVNSANLTLSDYSVGAYTETGNVQNNATITVGKSLVGGSVNKVSVGMATEKGTITNNS TINVPDKYGVGMVATKGGTAINAVGATINANGELSYAMQATGSSNLINNGTINVRGKDAR GMAATNNSKILNTGTITIDSSATKAQGIYVDFGSEVENSGTINLNSTTGVGILAGTGGVI KNNNTGTINLGPGVSPAQKSKREGASQLSAGAITIKGPKAYIDGVEIQNSGVINVNGPLD LGTIKLGSAAGHIGTINAESFNNGKFIVLPNATLGSNRDMYTIQYLGGIQNVPNNGSITA ISHSATFVADIQKDTTSHNITRIVLVRVPYTKLLAGTAAENFGKGLDDLYKGLSQKGPKD PEQKIFDGLKMISDKNQLGATFDMELRGNTYANVQGRILNINENFSNSYENLKNSNLYAR ERFKTGAIITSGNAKDKNPAVEDYKSTTTGLIVMKEKDFVTYGRSADVSLAFTETNFKFD YGSKERVHSLQAGVGFENFLTENNWKYSTRGEFTINRHNMKRKIHLSNGTFENRGKYWSE TVEWKNKLRYEIGSHNGLVTAGVFGTFNLGYGKFHNIKENGDGVELEIRDKDMYMVRPGV GVDVAINHYTKGGKVSLVGTATAEYEAGKVYNGVNQAKIKNSNAGYYDLEKPKEIREIFK VGAQVQYETNAGHKIGVGVTREAGSVNATKVGINAVYKF >gi|292606581|gb|ADGG01000029.1| GENE 57 64258 - 64506 364 82 aa, chain - ## HITS:1 COG:no KEGG:FN1084 NR:ns ## KEGG: FN1084 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 82 4 85 85 136 90.0 2e-31 MFESWAENLYDETFSDMFDALVAEYKNGEVTVEQLKINLAEQQQILLNAFTEGEVKSTYC NAMVDAHQYVIALISNGKIVKE >gi|292606581|gb|ADGG01000029.1| GENE 58 64631 - 65227 688 198 aa, chain - ## HITS:1 COG:FN1083 KEGG:ns NR:ns ## COG: FN1083 COG2431 # Protein_GI_number: 19704418 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 198 1 198 198 250 85.0 1e-66 MIAVSCAVIIGMLLGYFTKSHFEFDIGLVIQFGLYFLLFFIGIDIGKNENIITDLKKLNK KVLFLPFITILSSLAGGAVASIFLSLTMPETIAVSAGMGWYSFSAIELSKVSVELGGIAF LSNIFRELLAIIFIPIIAKKVGALESVSVAGATAMDSVLPIINRSTSAEISIISFYSGLV ISIVVPILIPILVNIFSL >gi|292606581|gb|ADGG01000029.1| GENE 59 65224 - 65499 284 91 aa, chain - ## HITS:1 COG:no KEGG:FN1082 NR:ns ## KEGG: FN1082 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 91 1 91 91 107 89.0 1e-22 MLDIFIYICIILFAVFLVRKKLFPEKLLKKISLLQSLSLYFLLGAMGYKIGSDDRLISNL HILGIKALVVSVFAIIFSIVFVKFFYWGDKK >gi|292606581|gb|ADGG01000029.1| GENE 60 65893 - 66336 863 147 aa, chain + ## HITS:1 COG:FN2118 KEGG:ns NR:ns ## COG: FN2118 COG2849 # Protein_GI_number: 19705408 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 25 146 76 188 245 89 44.0 2e-18 MSEKEIYSGPNFRYRPDKNNFTEKEGSEFFYYESGQLKAEYNYKNGKLDGFAREYYENGQ LIAEGNYSNGKLEGISKMYYESGQLRSENSYKNNLLNGISKTYYENGQLKEEVNYKDGQI VQENLETELKDFCNIAYEDDKLKLEFD >gi|292606581|gb|ADGG01000029.1| GENE 61 66811 - 67692 939 293 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782708|ref|ZP_06748034.1| ## NR: gi|294782708|ref|ZP_06748034.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 293 5 297 297 435 99.0 1e-120 MCEQKQLKQIYFRSNLIRNEELCKLYSVDGRLKLDVVYTNPVKKEKGKVAGINTFDIETF NNNSMEVVGKYKNTENATDIKVTIVPNDQVGIEQQVNIGANSEKPQRYNVEVDPVVVAKD TKNVKLPSNELFSSVDYVVASKDSTIESKPEKPKRHSVRVMPIGARNTTKKEESIKVGAA QNNVEPVVEEKVNLQVETPVETTKTNNTTKDYRVIPEQPKVEKMQEEPIIEKEVVTSNTN VHYEEVSPKGQRKNSFLLPILFIGIGILLGGFLGLKSSFMFNAPKTVETAQNK >gi|292606581|gb|ADGG01000029.1| GENE 62 67764 - 68537 937 257 aa, chain - ## HITS:1 COG:FN0428 KEGG:ns NR:ns ## COG: FN0428 COG1387 # Protein_GI_number: 19703770 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Fusobacterium nucleatum # 1 257 2 258 258 361 82.0 1e-100 MFDQHVHSNFSFDSNEALENYINVSNKNDIVTTEHLDFANPVINYEDSSINYLKYIEEID SLNKKYSNKFFSGIEIGYTPNSEKRIEDFLKDKNFNLKLLSIHQNGIYDYMCVNKKLISL EALIQEYFEKMIQALESSIEFNVLAHFEYGIRIIDISVADFDSLASKFLNKIIELIVKKE IAFEVNTKSMYKYKKENLYSYMIEKYLKKGGKLFTLGSDAHNIKDYAYKFDEARKFLLAR NVKEIILFKDKIKMEKI >gi|292606581|gb|ADGG01000029.1| GENE 63 68537 - 69154 1006 205 aa, chain - ## HITS:1 COG:FN0427 KEGG:ns NR:ns ## COG: FN0427 COG0461 # Protein_GI_number: 19703769 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 205 7 211 211 393 97.0 1e-109 MLDREIINALLEIKAVELRVDKENWFTWASGIKSPIYCDNRLTMSYPKIRKQIAEGFVKK IKELYPNVDYIVGTATAGIPHAAWISDIMDLPMLYVRGSAKDHGKTNQIEGKYEKGKKVV VIEDLISTGKSSVLAAQALQEEGLEVLGVIAIFSYNLNKAKEKFDEAKIPFSTLTNYDVL LELAKETGLIGDKENQILVDWRNNL >gi|292606581|gb|ADGG01000029.1| GENE 64 69170 - 70045 1007 291 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782711|ref|ZP_06748037.1| ## NR: gi|294782711|ref|ZP_06748037.1| hypothetical protein HMPREF0400_00691 [Fusobacterium sp. 1_1_41FAA] # 1 291 1 291 291 435 100.0 1e-120 MKSKIIKILLFLFIGLECLALTNRERIEKDLRKLNINDSKIIAQTITIDEKIGDKLLQGE GVEVLLKDLKSLVAENPKNFYISYQIARYYLETEKNIEEVKKNKKYFDLYIENVPQEDEK LSMKMLYYEKVGDKVNFKKYYDKFFKKTSGKGLGVLARTKYKKDAASIKKDFALALDLFK KEIEDGNKDEVTEEELFLIQNSYDSLVIQEMLEKKEYQKIIDYYLNNMANQNYYTTGVMM KYGDRLTSQFYIITNLNEKFLNKNKENLKKITNTKLYRELEKFGKVIVVNK >gi|292606581|gb|ADGG01000029.1| GENE 65 70035 - 70748 1033 237 aa, chain - ## HITS:1 COG:FN0426 KEGG:ns NR:ns ## COG: FN0426 COG0284 # Protein_GI_number: 19703768 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Fusobacterium nucleatum # 1 235 1 235 237 421 97.0 1e-118 MKKEVIIALDFPTLEKTLEFLDKFKEEKLFVKVGMELYLQNGPVVIDEIKKRGHKIFLDL KLHDIPNTVYSAAKGLAKFNIDILTVHAAGGSEMLKGAKRAMTEAGVNTKVIAITQLTST SEEDMRKEQNIQTSIEESVLNYARLAKESGIDGVVSSVLETKKIREQSGEDFIIINPGIR LAEDSKGDQKRVATPIDANRDGASYIVVGRSITGNENPEERYRLIKNMFELGDKYEK >gi|292606581|gb|ADGG01000029.1| GENE 66 70765 - 71022 251 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782713|ref|ZP_06748039.1| ## NR: gi|294782713|ref|ZP_06748039.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 85 1 85 85 173 100.0 3e-42 MLRNELAKEKLFPSNKDEVTGLLETLGICGILETKEHRGFWDSFTPMFERDSGDLRQYFS YPFHWWKGKDRVNYENVKNIFKIAV >gi|292606581|gb|ADGG01000029.1| GENE 67 71169 - 71378 304 69 aa, chain - ## HITS:1 COG:DR0178 KEGG:ns NR:ns ## COG: DR0178 COG0675 # Protein_GI_number: 15805214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 2 68 314 380 409 89 53.0 2e-18 KWYKRIIVRVDKFFASSQICNCCGYRNGEVKDLSIREWTCPVCGAVHNRDINAAKNILKE GLKILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 21:51:10 2011 Seq name: gi|292606580|gb|ADGG01000030.1| Fusobacterium sp. 1_1_41FAA cont1.30, whole genome shotgun sequence Length of sequence - 20342 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 7, operones - 3 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 272 - 754 446 ## gi|294782715|ref|ZP_06748041.1| hypothetical protein HMPREF0400_00695 2 1 Op 2 . - CDS 795 - 1472 911 ## FN0425 putative cytoplasmic protein 3 1 Op 3 13/0.000 - CDS 1469 - 2383 1384 ## COG0167 Dihydroorotate dehydrogenase 4 1 Op 4 3/0.000 - CDS 2395 - 3207 1345 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 5 1 Op 5 24/0.000 - CDS 3251 - 6427 4619 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 6 1 Op 6 7/0.000 - CDS 6484 - 7560 1609 ## COG0505 Carbamoylphosphate synthase small subunit 7 1 Op 7 15/0.000 - CDS 7576 - 8856 1853 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 8 1 Op 8 8/0.000 - CDS 8871 - 9761 1237 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 9 1 Op 9 . - CDS 9849 - 10370 665 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase - Prom 10505 - 10564 9.8 - Term 10414 - 10462 1.0 10 2 Op 1 2/1.000 - CDS 10627 - 11790 1093 ## COG0732 Restriction endonuclease S subunits 11 2 Op 2 . - CDS 11801 - 12772 1133 ## COG0582 Integrase - Prom 12902 - 12961 12.9 + Prom 12696 - 12755 9.0 12 3 Tu 1 . + CDS 12871 - 13461 559 ## COG0732 Restriction endonuclease S subunits 13 4 Op 1 27/0.000 - CDS 13440 - 14018 571 ## COG0732 Restriction endonuclease S subunits 14 4 Op 2 4/0.000 - CDS 14005 - 15642 1629 ## COG0286 Type I restriction-modification system methyltransferase subunit 15 4 Op 3 . - CDS 15665 - 18811 3242 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 18852 - 18911 10.7 - Term 18881 - 18927 7.4 16 5 Tu 1 . - CDS 18933 - 19484 736 ## COG0431 Predicted flavoprotein - Prom 19522 - 19581 10.8 17 6 Tu 1 . + CDS 19647 - 19994 428 ## gi|294782731|ref|ZP_06748057.1| hypothetical protein HMPREF0400_00711 + Term 20103 - 20141 0.6 18 7 Tu 1 . - CDS 20171 - 20341 121 ## gi|254304086|ref|ZP_04971444.1| hypothetical protein FNP_1756 Predicted protein(s) >gi|292606580|gb|ADGG01000030.1| GENE 1 272 - 754 446 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782715|ref|ZP_06748041.1| ## NR: gi|294782715|ref|ZP_06748041.1| hypothetical protein HMPREF0400_00695 [Fusobacterium sp. 1_1_41FAA] # 1 160 1 160 160 285 100.0 6e-76 MIDKKAKRLFLKYMENKSSLNHEEVEYIKEMDLLREDIPVTEKEFITNLEKMLTEISLEE VSNVFLYSLSTRDLDYRYILASYIYARSWLKHDRGKEYKIPKKITPTFFNWVKYCSGGIW GEIHKPYYYLSEFLNMEKKIPKEEDYQILREILSFADNFD >gi|292606580|gb|ADGG01000030.1| GENE 2 795 - 1472 911 225 aa, chain - ## HITS:1 COG:no KEGG:FN0425 NR:ns ## KEGG: FN0425 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 220 1 220 221 310 88.0 2e-83 MKLIFKDYLDIFEKYPKDEYLTREERKERYKLLQEYEKRNYQDEISIDEFKDFISLYIDK IDISSQFIGKFLKVLKKDIDNGGTFALKFLIGDKDENDYYLKFFSLLYDEFGDKINLVNK LLEKEPDYLPAIKQKYAILSNYIDFSIHEMPWGLLLDKASSEKNAKAEALADLDDFLELS KKLGKDNKEYIEECRIYYNAWFDFLDNKDKYKSYEEYLEKNNIEY >gi|292606580|gb|ADGG01000030.1| GENE 3 1469 - 2383 1384 304 aa, chain - ## HITS:1 COG:FN0424 KEGG:ns NR:ns ## COG: FN0424 COG0167 # Protein_GI_number: 19703766 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Fusobacterium nucleatum # 1 304 1 304 304 556 97.0 1e-158 MSERLRVQIPGLDLKNPIMPASGCFAFGIEYAELYDISKLGAIMIKAATKEARFGNPTPR VAETSSGMLNAIGLQNPGVDEIISNQLKKLEAYDVPIIANVAGSDIEDYVYVADKISKVP NVKALELNISCPNVKHGGIQFGTDPDVARNLTEKVKAVSSVPVYVKLSPNVTDIVAMAKA VEAGGADGLTMINTLVGIVLDRKTGKPIIANTTGGLSGPAIKPVAIRMVYQVAQAVNIPI IGMGGVMDEWDVIDFISAGASAVAVGTANFTDPFVCPKIIDNLESALDKLGVNHILDLKG RAFK >gi|292606580|gb|ADGG01000030.1| GENE 4 2395 - 3207 1345 270 aa, chain - ## HITS:1 COG:FN0423 KEGG:ns NR:ns ## COG: FN0423 COG0543 # Protein_GI_number: 19703765 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Fusobacterium nucleatum # 1 270 1 259 259 461 88.0 1e-130 MKMEDCTVEENVQIAKDTYKMKIKGNFVKECRTPGQFVNIRIGDGREYMLRRPISISEID RGENLVTIIYRIVGEGTKFMADIKKGSEIDIMGPLGRGYDVLSLKKGQTALLVGGGIGVP PLYELAKQFNQRGIKTIAILGFNTKDEVFYEEEFKKFGETYVSTVDGSVGTKGFVTDVIK KLQAENNLVFNKYYSCGPVPMLKALISTVGEDGYVSLENRMACGIGACYACVCKKKKKDK DIIAYDEKKVEYTRVCYDGPVYLASDVEIE >gi|292606580|gb|ADGG01000030.1| GENE 5 3251 - 6427 4619 1058 aa, chain - ## HITS:1 COG:FN0422 KEGG:ns NR:ns ## COG: FN0422 COG0458 # Protein_GI_number: 19703764 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Fusobacterium nucleatum # 1 1058 6 1063 1063 2039 97.0 0 MPKRKDIKTILVIGSGPIIIGQAAEFDYAGTQACLSLREEGYEVILVNSNPATIMTDKEI ADKVYIEPLTVEFLSKIIRKERPDALLPTLGGQVALNLAVSLHESGVLDECGVEILGTKL SSIKQAEDRELFRDLMNELNEPVPDSAIVHTLEEAEKFIKEIGYPVIVRPAFTMGGTGGG ICYNDEDLQEIVPNGLNYSPVHQCLLEKSIAGYKEIEYEVMRDSNDTAIVVCNMENIDPV GIHTGDSIVVAPCLTLTDRENHMLRDVSLKIIRALKIEGGCNVQIALDPNSFKYYIIEVN PRVSRSSALASKATGYPIAKIAAKIAVGMTLDEIINPVTNSSYACFEPAIDYVVTKIPRF PFDKFGDGDRYLGTQMKATGEVMAIGRTLEESLLKAIRSLEYGVHHLGLPNGEEFSLEKI IKRIKLAGDERLFFIGEALRRDVSIEEIHEYTKIDLFFLNKMKNIIDLEHLLKDNKGNIE LLRKVKTFGFSDRVIAHRWEMTEPEITELRHKHNIRPVYKMVDTCAAEFDSNTPYFYSTY EFENESTRSEKEKIVVLGSGPIRIGQGIEFDYATVHAIMAIKKLGYEAIVINNNPETVST DFSISDKLYFEPLTQEDVMEILDLEKPLGVVVQFGGQTAINLADKLVKNGIQILGSSLDS IDTAEDRDRFEKLLIELKIPQPLGKTAFDVETALKNANEIGYPVLVRPSYVLGGRAMEIV YNDEDLKKYMEKAVHINPEHPVLIDRYLIGKEIEVDAISDGENTFIPGIMEHIERAGVHS GDSISIYPPQSLSEKEIETLIDYTKKLASGLKVKGLINIQYVVSKGEIYVLEVNPRASRT VPFLSKVTGVPVANIAMQCILGKKLRDLGFTKDIADVGNFVSVKVPVFSFQKLKNVDTTL GPEMKSTGEVIGTDINLEKALYKGLTAAGVKIKDYGRVLFTIDDKNKEAALNLAKGFSDV GFSIVATEGTGTYFEGHGLKVKKVGKIDNSDYSVLDAIQNGDVDIVINTTTKGKSSEKDG FKIRRKATEHGVICFTSLDTANALLRVIESMSFRVQSL >gi|292606580|gb|ADGG01000030.1| GENE 6 6484 - 7560 1609 358 aa, chain - ## HITS:1 COG:FN0421 KEGG:ns NR:ns ## COG: FN0421 COG0505 # Protein_GI_number: 19703763 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Fusobacterium nucleatum # 1 358 1 358 358 716 98.0 0 MYNRQLILEDGTVYKGYAFGADVENVGEVVFNTSMTGYQEILSDPSYNGQIVTLTYPLIG NYGINRDDFESMKPCIKGMIVKEVCTTPSNFRSEKTLDEALKEFGIPGIYGIDTRALTRK LRSKGVVKGCLVSIDKNVDEVVAELKKTVLPTNQIEQVSSKSISPALGRGRRVVLVDLGM KIGIVRELVSRGCDVIVVPYNTTAEEVLRLEPDGVMLTNGPGDPEDAKESIEMIKGIIGK VTIFGICMGHQLVSLACGAKTYKLKFGHRGGNHPVKNILTGRVDITSQNHGYAVDIDSLK DTDLELTHIAINDRSCEGVRHKKYPVFTVQFHPEAAAGPHDTSYLFDEFIKNIDKNMK >gi|292606580|gb|ADGG01000030.1| GENE 7 7576 - 8856 1853 426 aa, chain - ## HITS:1 COG:FN0420 KEGG:ns NR:ns ## COG: FN0420 COG0044 # Protein_GI_number: 19703762 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Fusobacterium nucleatum # 1 425 1 425 425 785 92.0 0 MLLKNCKILKNGKFEKVDIFIKDDKIEKISENIDVVDENTIDVKNKFVTAGFIDAHVHWR EPGFSKKETVYTASRAAARGGFTTVMTMPNLNPVPDSLETLNKQLEIIEKDSVIRAIPYG AITKEEYGRELSDMEDIADKVFAFTDDGRGVQSANVMYEAMLMGSKLNKAIVAHCEDNSL IRGGGMHEGKRSAELGIKGIPSICESTQIARDILLAEAADCHYHVCHISAKESVRAVREG KKNNIRVTCEVTPHHLLSCDEDIKEDNGMWKMNPPLRGREDRDALIVGILDGTIDIIATD HAPHTMEEKIRGIEKSSFGIVGSETAFAQLYTKFVKTDIFSLEMLVKLMSENVAKIFNLP YGKLEENSFADIVVIDLEKEMTINPEEFLSKGKNTPYANEKVSGIPVLTISNGKVAYVDK KEINLL >gi|292606580|gb|ADGG01000030.1| GENE 8 8871 - 9761 1237 296 aa, chain - ## HITS:1 COG:FN0419 KEGG:ns NR:ns ## COG: FN0419 COG0540 # Protein_GI_number: 19703761 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Fusobacterium nucleatum # 1 296 9 304 304 521 93.0 1e-148 MKSLLSMEDLTNEEILSLVKRALDLKKGAENKKRNDLFVANLFFENSTRTKKSFEVAEKK LNLNVVDFEVSTSSVQKGETLYDTCKTLKMIGIDMLVIRHSENEYYKQLENLKIPIINGG DGSGEHPSQCLLDIMTIYENYGKFEGLDIIIAGDIKNSRVARSNKKALTRLGAKISFVAP EIWKDETLGEFVNFDDVIDKVDICMLLRVQHERHTDNKEKSEFSKENYHKNYGLTEERYK KLKEGAIIMHPAPVNRDVEIADSLVESEKSRIFEQMKNGMFMRQAILEYIIEKNKM >gi|292606580|gb|ADGG01000030.1| GENE 9 9849 - 10370 665 173 aa, chain - ## HITS:1 COG:FN0418 KEGG:ns NR:ns ## COG: FN0418 COG2065 # Protein_GI_number: 19703760 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 173 5 177 177 279 93.0 2e-75 MKILLDENGIQRSITRISYEIIERNKTVDNIVLVGIKNRGDILAERIKEKLMELENVDIP LETIDITYYRDDIDRKNFDLDIKDTEFKSNLTGKVVVMVDDVLYTGRTIRAGLDAILSKS RPAKIQLACLIDRGHRELPIRADFIGKNIPTSHSENIKVYLKETDGKEEVVIL >gi|292606580|gb|ADGG01000030.1| GENE 10 10627 - 11790 1093 387 aa, chain - ## HITS:1 COG:XF2741 KEGG:ns NR:ns ## COG: XF2741 COG0732 # Protein_GI_number: 15839330 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Xylella fastidiosa 9a5c # 23 387 32 403 412 95 20.0 1e-19 MRYILKELIKIKNGKDYKTCKLGSIPVYGTGGIINYVGEFLYNDESILLPRKGSLSNIRY VNQPFWTVDTMYWTCVNKELVLPKYLYFYLKLLDLSSRDSGSTLPSMTFDAYYELEVEIP RIKKQKKILDLLNPIEEKIMINNKINDNLFSQISIIYNYWFTQYEFPNTNGKSYKSNNGE LYYNNIVKKDIPKNWVVETLASNSLSEIIKPGVDLFEEKIYYTTADIVNKNITNGSIVSY NTKEDRANMQPIPYSVWFAKMKNTIKHLFLAPNMKFIIENSILSTGLCGLKCKEIAFEYI SSYILHPYFENHKDVLSHGATQEAVNNDDLNYIYIIVPEEKILRQYHNLTKSIFKKIAEN MCENKELITIRDFLLPLLMNGQATISE >gi|292606580|gb|ADGG01000030.1| GENE 11 11801 - 12772 1133 323 aa, chain - ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 3 322 2 320 321 362 62.0 1e-100 MKEKIISNILQRMQNKINNKQLEELKIILIDEFSEENEEDKGKSNEQLKKLFIDAKRLEG CSDKTILYYVSTIETMITKINKSIVEIETEDLRTYLSDYQINNNSSKVTIDNIRRILSSF FSWLENENYIIKSPVRRIKKVKAPSIVKETYTDEELETMRDNVEALRDLVLIDILASTGM RVGELVKLNIEDINFTERECIVLGKGNKERVVYFDARTKIHLKRYLENRKDNNKALLISL KAPCNRLSIAGVELRLRKIGEKLGIKKVHPHKFRRTLATIAIDKGMPIEQVQKLLGHEKI DTTLQYAMVKQSNVKIAHQKYIG >gi|292606580|gb|ADGG01000030.1| GENE 12 12871 - 13461 559 196 aa, chain + ## HITS:1 COG:MYPU_0840 KEGG:ns NR:ns ## COG: MYPU_0840 COG0732 # Protein_GI_number: 15828555 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Mycoplasma pulmonis # 3 186 176 348 348 75 29.0 4e-14 MTINDNLEKQMKLLYEIFMFKAENKKINGSFVTARDLVEVLTGKEDANFSIQNGKFNFFT CSNEILKCNEYKYDSSSILIAGNGDFNVKHYSGKFNAYQRTYILTPQKDYYALLYLASLY RIESFKSKSTGSIVKFITKEDIENIPLFIPENKSIINILNKMIILKENNFSENEILIKLR DFLLPLLMNGQATISE >gi|292606580|gb|ADGG01000030.1| GENE 13 13440 - 14018 571 192 aa, chain - ## HITS:1 COG:alr4602 KEGG:ns NR:ns ## COG: alr4602 COG0732 # Protein_GI_number: 17232094 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Nostoc sp. PCC 7120 # 5 164 218 377 390 79 32.0 3e-15 MNKIKLGEILKVKHGFAFKSQNYVNKSEFALVTLANISSTNNFQFNEKKLTYYNGEFPNE YILNEDDLIIPLTEQVIGLFGNTAFIPKVKGISFLLNQRVGKIIPIKNRANNYYLHYLLA TDLVRKQLEHRASGTKQRNISPNDVYDVTVFICDVKEQKKIGELLYNMERKINLNNKIND NLDYLNYSDIVA >gi|292606580|gb|ADGG01000030.1| GENE 14 14005 - 15642 1629 545 aa, chain - ## HITS:1 COG:jhp0415 KEGG:ns NR:ns ## COG: jhp0415 COG0286 # Protein_GI_number: 15611483 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Helicobacter pylori J99 # 3 543 7 543 543 484 49.0 1e-136 MNLLVKEKTIKLIDELKSTCQIYGMGNDGNEYKIITQVFLYKFINDKFGYEIKKINEELK NAEKWEILYSNMNEEDRLYLLDELSADVPLLEPQHLISNLWNQQSKGDFALIFDQTMVDI AQKNEDIFATQTTLNTKIPIFEKLTIYVTDENERSNFARALVDKLVNFSFEEVFGEHYDF FAAIFEYLIKDYNTNGGGKYAEYYTPQSIATIMARLLVGNKKDYHSVECYDPSAGTGTLV MALSHQIGEDKCTIFTQDISQRSNKMLKLNLILNGLVSSLDHAIQGDTLVYPYHKSDNGE DLRTFDFVVSNPPFKMDFSENREKIAAMPARFWAGVPNIPAKKKESMAIYTLFIQHVINS LKSKTGKGAIVIPTGFITAKSGVEKKILEKIVESKIVYGCVSMPSNVFANTGTNVSVLFF DNAKNHDKVILIDASKLGEDYQDGKNKKRRLREEDIELIINTFNDKKNVDDFSIAVSYEE IKEKKYSLSAGQYFDIKIEYIDMTPEEFEAKMKEYQKELQEYFEEGEKLQKEIMEQLGKI KYEQD >gi|292606580|gb|ADGG01000030.1| GENE 15 15665 - 18811 3242 1048 aa, chain - ## HITS:1 COG:HP0464 KEGG:ns NR:ns ## COG: HP0464 COG0610 # Protein_GI_number: 15645092 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Helicobacter pylori 26695 # 4 1017 3 1022 1055 543 37.0 1e-154 MGKFNENTRVQLPALVHLTRLGYEYFGKISENSAGEVYDPDTNILIEVFKKQFDILNPKF EGMGNQILLDIRQELNNDDLGQSFYKRLMSTEKKLIDFENIENNVFHFTAEFTCKNGYDE FRPDITLFINGLPLVFIEVKKPNNIGGIISEIERMNNSRFPNKKFRRFINITQLMIFSNN MEYSSKGGIVPIEGAFYCTASKDKSFFSCFREETIDNDEMYFYKNYAYKCVDDIVEKEIL NDFNCQVLHNAPEYQKNLKETTPTNRILTSMCSPERLLFLLKYGIAYVNMTKEEDGKIVS INQKQIMRYQQMFASFAIRERLEESKKSGVIWHTQGSGKTALSFYLIKFLTDYFARKNKV AKFYFIVDRLDLLEQSKQEFEARGLSVKTANNREELMEQFRTKQSMEGTSGNLEITVVNI QRFTEDKRKVDLPQYATNLQRIFIIDEAHRGYKPEGSFLGNLFNADSDSIKIALTGTPLL KEERASWKIFGDYIHTYYYDKSIQDGYTLKIIREDIETSYREKLNEIYEKLDILVQKKDI KKSDIVEHESYIKELTKYIIEDLKSFRLIQGDNTLGGMVICETSTQAKKICEVFDKVQNE LNRNSSIPTNFKIGLILHDSDDKETRKKIITDFKKNMTIDILIVFNMLLTGFDAPRLKRL YFGRKLKEHNLLQAITRVNRPYKDNRYGYIIDFADIKQNFEETNATYLEELGRFNETDED NIVGKFNNVIEDKEKLIQKVEEVKDILFDYTTKNLEDFSSEISSIEDKKELLLLKKALIE AKDCFNIVKSFGDEELKEKFNKMQIVNLPQMISEIQYRINIVNQKLTLESNESMKNLINE AMLDIEFSFSKLSVEELKIVSKYDLNEKLKRTVNAFIENIDKEDPEYITIQEAFRQRFKE KGFSISNMKEYEENSKHLDEIIAKLSELKRKNETLSRKYKGDNKFTRIHKRIREINIVKK DNNLKSIVSDRESEIMDILLIIKTDLDKEVYDRNDILKKDAYFEKTVLSNVTSIFKKRNI VSEREDRFFIMDKIKTEYLNQYNETYMM >gi|292606580|gb|ADGG01000030.1| GENE 16 18933 - 19484 736 183 aa, chain - ## HITS:1 COG:SPy1959 KEGG:ns NR:ns ## COG: SPy1959 COG0431 # Protein_GI_number: 15675757 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pyogenes M1 GAS # 3 172 2 169 180 116 38.0 3e-26 MNKKVLFVVGSLREKSFNRTVAEYISKRLEEKGIETSFLDYSKLPFMSQDIEFPAPIEVE KVRNDVKGADALWIVTPEYNGSVPGALKNFLDWISRPVVKGNFGAPEFVKGKLVAVSGVA GKSEASLVITEISGLLSRMGLNLLEEKVGLSLPVEAFQTGVFNLSDEQKVKLDKEIKVFI EKL >gi|292606580|gb|ADGG01000030.1| GENE 17 19647 - 19994 428 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782731|ref|ZP_06748057.1| ## NR: gi|294782731|ref|ZP_06748057.1| hypothetical protein HMPREF0400_00711 [Fusobacterium sp. 1_1_41FAA] # 1 115 1 115 115 206 100.0 3e-52 MKKFFLCLFVLLSFSIFAGITTDGKPHFDKMIGRKIDYPDTADSFKIVKKGNSYKLIYYG YDPETQKSSKETSTLRIYKKIYLIDNNGIVYGYDTAKKKVAFLRENLEVIYYEGH >gi|292606580|gb|ADGG01000030.1| GENE 18 20171 - 20341 121 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254304086|ref|ZP_04971444.1| ## NR: gi|254304086|ref|ZP_04971444.1| hypothetical protein FNP_1756 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 56 420 475 475 87 96.0 2e-16 QRDLYSAFLIKNVKENLEEVNIEKVQKEFKNFVKLHNEEIERIKKGNVKTLKCMGF Prediction of potential genes in microbial genomes Time: Thu May 19 21:51:34 2011 Seq name: gi|292606579|gb|ADGG01000031.1| Fusobacterium sp. 1_1_41FAA cont1.31, whole genome shotgun sequence Length of sequence - 3285 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 586 604 ## CLK_A0269 putative IS transposase - Prom 713 - 772 17.3 2 2 Op 1 1/0.000 - CDS 1109 - 1573 577 ## COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 3 2 Op 2 . - CDS 1563 - 2867 1944 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 2894 - 2953 13.5 - Term 2932 - 2981 8.8 4 3 Tu 1 . - CDS 2998 - 3285 380 ## FN2058 hypothetical protein Predicted protein(s) >gi|292606579|gb|ADGG01000031.1| GENE 1 1 - 586 604 195 aa, chain - ## HITS:1 COG:no KEGG:CLK_A0269 NR:ns ## KEGG: CLK_A0269 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 1 195 1 196 480 216 59.0 4e-55 MANYVLTLALKTELWQEHILEKRLNIARMIYNSCLSEILKRHRKMINSSEYKEISNLDKK EQSKRYKELDKKYSISKFELNKYVKPMTQKFKKNIGSQMGQELAERAFATYEKFKYGKAK KVYFKSYENFYSVREKGNITGLRFFKEDCCISWLGLKIPVIIKNNDKYAQSCFLDKLLYC RLLKRVVNGKNKYYV >gi|292606579|gb|ADGG01000031.1| GENE 2 1109 - 1573 577 154 aa, chain - ## HITS:1 COG:FN0539 KEGG:ns NR:ns ## COG: FN0539 COG1648 # Protein_GI_number: 19703874 # Func_class: H Coenzyme transport and metabolism # Function: Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) # Organism: Fusobacterium nucleatum # 1 152 1 152 152 179 76.0 2e-45 MPNKFFPVSIDLNNKNILVIGAGKIALRKVKTLLDYNCNITVITKEISEEKFLELEKENK IKILKNQEFEEKFLENTFLVVSATDNKELNDKISKLCMSKNILVNNITSQDNMNLRFMSI LSNDDIQISITANGNPKKAVEVKNKIKEFLEKIF >gi|292606579|gb|ADGG01000031.1| GENE 3 1563 - 2867 1944 434 aa, chain - ## HITS:1 COG:FN0540 KEGG:ns NR:ns ## COG: FN0540 COG0001 # Protein_GI_number: 19703875 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Fusobacterium nucleatum # 1 434 1 434 434 790 89.0 0 MVFKNSIDLYKKALNLIPGGVNSPVRAFKSVNREAPIFVKKGQGAKIYDEDNNEYIDYIC SWGPLILGHNHPKVIEEVKKIIENGSSYGLPTKYEVDLAELIVEIVPSIEKVRLTTSGTE ATMSAVRLARAYTGRNKILKFEGCYHGHSDALLVKSGSGLLTDGYQDSNGITDGVLKDTL TLGFGDLEKVENLLRNEEIACVIVEPIPANMGLIETNKEFLQGLRRITEETKTILIFDEV ISGFRLALGGAQEFFGITPDLTTLGKIIGGGYPVGAFGGKREIMDLVAPVGRVYHAGTLS GNPIASKAGFATISYLKENPNIYKELAENTNYLVDNVEKLAEKYGVDVCINSMGSLFTIF FVDLEKVENLEDSLKANTENFSIYFNTMLDNGIVVPPSQFEAHFLSIAHTKKELDKTLEV MEMAFKKIGEKNAK >gi|292606579|gb|ADGG01000031.1| GENE 4 2998 - 3285 380 95 aa, chain - ## HITS:1 COG:no KEGG:FN2058 NR:ns ## KEGG: FN2058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 95 1702 1794 1794 143 81.0 1e-33 VVFKHYFGRNALKAGVSVAYENELGRVANPKNKARVGYTTAGWYDLRGEKEDRRGNVKSD LNIGWDNQRIGVTANVGYDTKGNNVRGGVGLRVIF Prediction of potential genes in microbial genomes Time: Thu May 19 21:51:41 2011 Seq name: gi|292606578|gb|ADGG01000032.1| Fusobacterium sp. 1_1_41FAA cont1.32, whole genome shotgun sequence Length of sequence - 7401 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 6970 9272 ## FN2058 hypothetical protein 2 1 Op 2 . - CDS 7018 - 7365 192 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 Predicted protein(s) >gi|292606578|gb|ADGG01000032.1| GENE 1 1 - 6970 9272 2323 aa, chain - ## HITS:1 COG:no KEGG:FN2058 NR:ns ## KEGG: FN2058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 695 2323 1 1599 1794 1726 65.0 0 MGNNSLSNTEKNLRSIAKRYENVKYSVGLAVLFLMNGTSAFSDVNAIQGPEKQNDVVSDA KAIKSAVKEKKEVKQASQKLKASWVNMQFGANDMYSNFFATSKTKVEKTSVVKSEKTVLV ASADNSASLPMFAKLLSDIEETTENRTEVLATIANKEETPTMEEIKASKQELRSSVGNLQ DKIDTARRENQKEIDGLRLELIKLMEQGNQVVKSPWSSWQFGANYFYEDWGGSYKGRGDK KEKYPYEGVFARSTNPFGRATSITSTTTATQKAALGSIVAKNGGFNPNDKGLNYGLIGRA EISEDPISIEVSAGIRPKNIQKGALTLSVPPVNVTQPRPSVAPGIPNTPGAPNINIPAFS PVAPKVEAPEIPAPPTFAVILGADCNTACSGNEQDTKAGFLTSPQNKSKQNIPIRVRYTW GNNSGAEKRYAFKMDLEENLNWGTRPDTMYFNSYNFGYNGLANGEYASALTASQDTDGDR NNQYFFIGGSRFIEFDNNDSGTHEIPASKTIHLGGILSLGFVVQDNGITAINSGKITDKS ENEDKWIQDMPYTPGKDYLEIKGPSYDPTKHEETVYKIRRSKDGYVGYKVGMAQVQEDGD TGNEFYNKGTLEFYGERSIGMYSYLPTHTSKIKLVNKKFITMSGKESYGMRLNSHTDSTA ELLNDVDGVITLRKNPDSTNGNLADRADNSAAMALMTDGTVANKVTLDPGKALNKGKIEL KDNISNALGMFINIDSNMTNQGEINISAIAQKDANNKYKPNVGMRADQVESKYSTATTYD TSVINDAAGKISITGQGNIAMLASGKNTAGPNGKGTATATNKGEIKIDKGTVVAKDNYGM LSINEGSAINDAAGKINIGNAEGTVGMAALKQGTTHSTAENKGTITINGPKSTAVYNTGH FLMDNATAKINVKGSQSIGLYAKGIDTTHTKTELKQGTIKSEDGAVGLYSDEANVILDNT SNNLKLVAGNGGLLFYNYKSANPAVSDGKFTLKGAVTADIESGGYGFYLKNATINSVNGQ VQGVPNFLNGMFDLAPGAQKLKVKMQAGGTFMVLHKPTGGSMKLTSVSSLASINSALGTK VELVAPTTGSYKVYSVYRGKLEINQNVNLDNDESTATPDTFYKVDFRSSNMVVETGKTVS GTKQGQVALFQGNFNEGAGGDVGAVGDVSIVNNGTIKLTGNSITTGPAASRKTTTAMAGD FITLTNNKTIEVTGNNGIGIYGAGGSKILNSAGASITVGQEGVALYGANKLNNSTLGNGK ISVTNAGTLKGVSGKTKAFGIFAENTSTVANSTLTNSGTIDFSSSQESIGIHSINSTVSN TGNIKMGLKGVAINAKNSNITSTGDIVLAGNGIAFNLGGAFTGRTLNFSSKVTLTGDGNS IFNLKDMSFNSVGASLTENVNIVPNGKSFAYFSMDNSSLIYDRNKTFTGNKITLVSAKNS SVDWRSNVTLNGQENVAFYLNGRKTGAAFELKTATGKTITLGNKSVGAYGTNGARIENNS NMVIGSDGAALYSTGATGSLKNTGKLTIGKNSVGMFMKDGTALTNTGEIVSTAEGAKGLV INRTAAGTYTNNGKIKLTGTSSIGIHAEGAAHNIISGADVEVGNTTGTSQSVAIHLKDGG QVRVLGNTSVKAGNDSIAIYGSTVSTTVDNNAKVEVGNGAVGIYAKAGNVNLNTGSKMKI GQSLGANKEAVGVYYVGNGGTINNNLASFDIGKGSIGIVDAGTGTTTINNNLATVNLKGD SVYTYTSNTGSNVIGNTAITSTGNGNYGYYVAGNLSNYGTMDLSSGNGNVGIYSAYGAGT GSGVARNYANIKVGKTDLENELYSIGMAAGYTNNNRPSENKVGHIVNMAGSTITVGNENS IGMYASGAGSTAENFGTIKVTAKKGIGMYLENGATGYNRAGGLIEIDPSAQNAIAVYSTG GTTVFKNYGTIRLKAPASKGIVTANNAQGTNETGGIIDVQHSSAEATKKIEGTAGGDKKF GDKTLSVPRGGLTDSKVKDSTGNIITPTVIDTTAATNTAKIQVSNDPIAKATYNRDILKE HQDFGSISKIGMYVDTSGVNFTNPIEGLSNLAGLKKADLIVGAEAAEYTNAKTITVGKNI LKRYNNALLGSGVDKWDILSGSLTWAAVPLKLGASGEVQGVMMAKTDYKEYAKNSTTPYN FLDGLEQRYDKNALDSREKRVFNKLNSIGKNEPILLSQAFDEMMGHQYANVQQRIQATGN ILDKEFNYLRNEWQNPSKDSNKIKTFGARGEYNTDTAGIKDYKSHAYGVAYVHEDETVRL GESTGWYAGIVHNTLDFKDIGNSKEEQLQAKLGIFKSVPFDEN >gi|292606578|gb|ADGG01000032.1| GENE 2 7018 - 7365 192 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 10 113 244 347 347 78 36 1e-14 MTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSVGSNQYNIGLS RRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR Prediction of potential genes in microbial genomes Time: Thu May 19 21:52:08 2011 Seq name: gi|292606577|gb|ADGG01000033.1| Fusobacterium sp. 1_1_41FAA cont1.33, whole genome shotgun sequence Length of sequence - 9123 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 10 - 408 615 ## gi|294782739|ref|ZP_06748065.1| translation initiation factor 4 gamma 2 1 Op 2 . - CDS 424 - 822 515 ## FN2052 hypothetical protein - Prom 1027 - 1086 9.9 - Term 1022 - 1081 4.5 3 2 Tu 1 . - CDS 1101 - 8456 10452 ## FN1554 hypothetical protein - Prom 8563 - 8622 10.6 - Term 8529 - 8586 3.0 4 3 Op 1 . - CDS 8630 - 8806 125 ## gi|294782742|ref|ZP_06748068.1| conserved hypothetical protein 5 3 Op 2 . - CDS 8903 - 9121 80 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606577|gb|ADGG01000033.1| GENE 1 10 - 408 615 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782739|ref|ZP_06748065.1| ## NR: gi|294782739|ref|ZP_06748065.1| translation initiation factor 4 gamma [Fusobacterium sp. 1_1_41FAA] # 1 132 1 132 132 128 100.0 1e-28 MKKFVKAILFLFALSSIAYAEDDGMSVLNKKRAEIEKAEKAKAKLAKEAEEKARKEAEEQ ARLAEKAAKEQAQAVEVVEAPVETVVATEGLNPQDEKEAMEILDDMRKKIKKEDTETLKL QQEDKRIRNIYI >gi|292606577|gb|ADGG01000033.1| GENE 2 424 - 822 515 132 aa, chain - ## HITS:1 COG:no KEGG:FN2052 NR:ns ## KEGG: FN2052 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 132 1 119 119 114 87.0 9e-25 MKIKYLLASMLVLGSLSYSAEATDTVAQEVINEVKNIEAEYQALMQKEAERKEEFIQEKA NLEKEVKELKEKQLGREELYAKLKQDSKIRWHRDEYKKLLKRFDEYYNKLEQKIADKEQQ IVELTKLLEVLN >gi|292606577|gb|ADGG01000033.1| GENE 3 1101 - 8456 10452 2451 aa, chain - ## HITS:1 COG:no KEGG:FN1554 NR:ns ## KEGG: FN1554 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 897 2451 7 1582 1582 1142 49.0 0 MRKNNLYDVEKNLRSIAKRYENVKYSVGLAVLFLMKGANAFSDNNIIQEVEKQKEVITGD QAIKSTNKIAKKEEQKVTNAKQGLKASWTNMQFGANDMYSNFFTTRKTKVEKASVVKNEK TVLVASADNSTSLPMFAKLMSDIEETKDTKDTTTNTPTMEEIKTSKENLRSSVGNLQDKI DVARRENNKEINGLRLELIQLMEQGNQVVKSPWASWQFGANYFYDDWGSAYKGRGDKKEK YPFEGVFTRSTNPFERYLSPESSNYSSLAKSTNPYSATTSARKGLRSSYGIASTTPVYEP IATLELNAGIRPRKVDKQPLNIEPVNITAPSAPDIRVNASTPVAVTPPTVTPPTVTLNIP TPNTKPFNDFSFTNGRYGTYDSGGSPTSGLNIIEGSGRVYTLGVNPNNPDIDSSNLQAGD LNNRTYKVEGGTVSGGGVAAAIFRISSKRGSLRGQNNEAYWNSIMTEDPTNPIVEGFTYG GTSATDRVKFYVAGDIKDDGSNRLGTNNRKGAIALHSVWNGTYHDIEGYLKGRSTMFSIE TWHSPKLVFKNIKVDIQGNENTLFYIYPHSYNGLVNNSVGDYNAFAQRGAFIGEVNADIK SQKNAIYSVMGLSGGLNITSTGTYKLEGSNNLVYSGLGYSPSFQNFIGNNAAHGYVSDRY KTGMTPVINLKTAPESYGDGNVIMYFSDLLPDNAAGYTETTVYDGNDNNWKKTKIGIFQG EVRASARIGEKLNIDGTATQTTEGNKIQQANGTLINGDNKYVENNVGILAQSGQRGALTA GGRTIVPTEDLGAASFTWVDQDKIHALYVNDIDVTFGKYSKGGLMVVSERGTQVDVAVTD PANPHHTDVVKDGSGNPIGNKKDAATIPVKTTPVLDYNKASTDYTNDNKILSSTVDSKNE AAIGTIIAYAKGSWKDSDTRMGQVTGVDPMSVTTRNAFKDAKSEINFGVPVEMSAKYAEI AGKKYNPVAYVAEGGKVTAKDTKAYGYGSVIAYAKNQIVGGAVKSSGEIAISGNIEAVDA WAASDANTTKEKYKNIGAYADGQGTKIIVSGNAKINGLGAFANDGGRVVISGTNSVLNSG ESTALAAKAGGNITFAGGDINVGSNASANSTPFYADTNANSKINFTGPTKINMTKGTFLV GNATDYQAAVATTNADGQITGGTKYNGMSNVELTASGSAKIVRNKDVPHTITWTGPGSLA ANIKIDTHISKITAPAANYLAYYSNGNYIINANAQLGNLTAADSFDNIKMTRELLTINAG KKIYSTTGVGLGMASSAGATSNAVSGYINNGTIDISGGSSRKTAVNVSYGTITNNGTVKV DKGVGLYGTNGSKIENKASGIVNVTNSGYGIVGMATGATTQTYGRDKLATGSAVEIKNDG LINVAGAQAIGIYADDNKGVALNEITIANNNKITVAGNKSVGIALRDSKNSGSGGILTLT GTGSSDIVTGTNGTGVYTENSQVNLNTNYGIETKDGGVGLYLKNSDILTNTTFEYKYSGS TNGRGIGIVYDKANATNNTKINLVNSTSTTGGMVGIFANGGGTFTNNGTINGTSAAKEFG IIGENTNIDNKAAITLGNASNMLNPNIALYTKTNNLITNSSNLTVGKNSIGIYGYGVNNS GDITVGDKGSAIYTQGGNVNVTSGTINVGKNEAVGIYSAGKSQVITNNATAMNIGEGSFG FANVGVGNTINSNVANVNLKDNSIYIYSKNAGTVNNATNLTATGTIGNNYGIYSAGQVNN TGNINFTSGKGNVGIYSINGGRAVNTATISVGASDPGNSVYSIGMAAGYVGDASTPAYTG NIVNEGTINVTGKDSIGMYGIGSATTVYNGASKGSTATINLSADGAMGVYLDEGAKGFNY GTIQTVGAPKKAVGVVVRKGAEFTNKGTININSAGGYAFVKIAGGVIKNYGTFNVSGGAT KEHLPGMSDTTKKVGGVEIKVDNKVSPATVTVTDPAGNIVTPTLVTAEQNKINAPISQIG MYIDTLSPTNPVGGLSSIGVTKADLIIGNEASQKTDKKYIQVDKNLIAPYNRAILSNPQI TDWNIYSGSLTWMSTATIDVNNGTINNIYLAKIPYTTFAGNEASPVDKKDTYNFLDGLEQ RYGVEKIGTRENKVFQKLNSIGNNEKILLFQATDEMMGHQYANTQQRIVATGDILDKEFK YLRNEWSNPSKDSNKIKTFGARGEYKTNTAGVIDYKNNAYGVAYVHEDETVKLGESTGWY TGIVHNTFKFKDIGNSKEEQLQGKLGIFKSIPFDHNNGLNWTISGDIFAGYNKMNRKFLV VDEVFNAKGRYHTYGLGLKSQLNSEFRLSESFTLKPYVALGLEYGRVSKVREKSGEIKLE VKSNDYFSIKPEIGAELGFKHHFDRKTVRVGVSVAYENELGKVANGKNKARVAGTDANWF NIRGEKEDRLGNIKSDLNIGVDNQRIGVTANVGYDTKGHNVRAGIGLRVIF >gi|292606577|gb|ADGG01000033.1| GENE 4 8630 - 8806 125 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782742|ref|ZP_06748068.1| ## NR: gi|294782742|ref|ZP_06748068.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 58 1 58 58 63 100.0 3e-09 MTDIKEYYFVLIFSIFIFVKKSKYENATIKPAIIFTFLYLILGILKFEILFKMLRKFF >gi|292606577|gb|ADGG01000033.1| GENE 5 8903 - 9121 80 72 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 2 71 346 415 416 103 75.0 2e-21 GDEIPIYDKENLQEYVFSGKRIKRGLYQTSGGKLINADCNGALNILRKSKVVDLSVLYNR GELNTPKRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 21:53:22 2011 Seq name: gi|292606576|gb|ADGG01000034.1| Fusobacterium sp. 1_1_41FAA cont1.34, whole genome shotgun sequence Length of sequence - 110299 bp Number of predicted genes - 104, with homology - 104 Number of transcription units - 32, operones - 24 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 108 - 293 139 ## gi|294782743|ref|ZP_06748069.1| hypothetical protein HMPREF0400_00723 2 1 Op 2 . - CDS 301 - 453 115 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 3 1 Op 3 . - CDS 491 - 859 241 ## FN1061 hypothetical protein - Prom 950 - 1009 10.0 + Prom 981 - 1040 14.4 4 2 Op 1 . + CDS 1104 - 2108 1526 ## COG0280 Phosphotransacetylase 5 2 Op 2 . + CDS 2127 - 2645 756 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 6 2 Op 3 1/0.364 + CDS 2659 - 3855 1875 ## COG0282 Acetate kinase 7 2 Op 4 . + CDS 3942 - 7511 4800 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 7525 - 7582 13.0 + Prom 7617 - 7676 16.9 8 3 Op 1 12/0.000 + CDS 7727 - 8539 1247 ## COG3959 Transketolase, N-terminal subunit 9 3 Op 2 . + CDS 8562 - 9491 1541 ## COG3958 Transketolase, C-terminal subunit 10 4 Op 1 . - CDS 9745 - 10467 1054 ## FN0296 putative cytoplasmic protein 11 4 Op 2 . - CDS 10543 - 11415 835 ## COG4296 Uncharacterized protein conserved in bacteria 12 4 Op 3 . - CDS 11433 - 12038 920 ## CLH_2545 hypothetical protein - Prom 12138 - 12197 13.2 + Prom 12038 - 12097 20.1 13 5 Op 1 1/0.364 + CDS 12170 - 13393 1272 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 14 5 Op 2 13/0.000 + CDS 13405 - 14643 1648 ## COG0124 Histidyl-tRNA synthetase 15 5 Op 3 . + CDS 14661 - 16439 2436 ## COG0173 Aspartyl-tRNA synthetase + Term 16444 - 16493 9.3 - Term 16432 - 16481 12.2 16 6 Op 1 . - CDS 16485 - 17342 1185 ## COG1397 ADP-ribosylglycohydrolase 17 6 Op 2 . - CDS 17362 - 18138 379 ## TTE0399 hypothetical protein 18 6 Op 3 . - CDS 18135 - 18833 207 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 18970 - 19029 13.2 + Prom 19088 - 19147 14.2 19 7 Op 1 12/0.000 + CDS 19197 - 21395 2584 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 20 7 Op 2 . + CDS 21400 - 21906 469 ## COG0602 Organic radical activating enzymes + Term 21911 - 21948 1.5 - Term 21890 - 21942 6.9 21 8 Op 1 27/0.000 - CDS 21947 - 25015 3291 ## COG0841 Cation/multidrug efflux pump 22 8 Op 2 13/0.000 - CDS 25012 - 26082 1155 ## COG0845 Membrane-fusion protein 23 8 Op 3 . - CDS 26091 - 27533 1705 ## COG1538 Outer membrane protein - Prom 27669 - 27728 13.3 + Prom 27708 - 27767 14.6 24 9 Op 1 3/0.000 + CDS 27797 - 28876 1201 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 25 9 Op 2 1/0.364 + CDS 28910 - 30244 1445 ## COG1797 Cobyrinic acid a,c-diamide synthase 26 9 Op 3 1/0.364 + CDS 30244 - 31236 1158 ## COG3177 Uncharacterized conserved protein 27 9 Op 4 . + CDS 31264 - 31914 956 ## COG2082 Precorrin isomerase 28 9 Op 5 . + CDS 31939 - 32721 562 ## FN0969 hypothetical protein 29 9 Op 6 . + CDS 32718 - 33491 600 ## FN0969 hypothetical protein 30 9 Op 7 . + CDS 33488 - 34240 618 ## FN0968 hypothetical protein 31 9 Op 8 . + CDS 34237 - 34983 588 ## FN0969 hypothetical protein 32 9 Op 9 . + CDS 34980 - 35717 541 ## FN0968 hypothetical protein 33 9 Op 10 6/0.000 + CDS 35733 - 36860 1607 ## COG1903 Cobalamin biosynthesis protein CbiD 34 9 Op 11 1/0.364 + CDS 36814 - 37500 846 ## COG2241 Precorrin-6B methylase 1 35 9 Op 12 1/0.364 + CDS 37490 - 38449 1277 ## COG1052 Lactate dehydrogenase and related dehydrogenases 36 9 Op 13 . + CDS 38473 - 39042 872 ## COG2242 Precorrin-6B methylase 2 + Prom 39077 - 39136 8.6 37 10 Op 1 . + CDS 39193 - 40431 1491 ## COG1373 Predicted ATPase (AAA+ superfamily) 38 10 Op 2 . + CDS 40471 - 41175 550 ## Fisuc_0312 hypothetical protein 39 10 Op 3 . + CDS 41179 - 41739 654 ## FN0960 hypothetical protein 40 10 Op 4 . + CDS 41776 - 42681 1029 ## Sterm_3574 hypothetical protein 41 10 Op 5 . + CDS 42697 - 43419 1041 ## COG2243 Precorrin-2 methylase 42 10 Op 6 . + CDS 43434 - 44114 736 ## FN0958 hypothetical protein 43 10 Op 7 . + CDS 44153 - 44926 1318 ## COG2875 Precorrin-4 methylase 44 10 Op 8 . + CDS 44944 - 45330 517 ## COG0346 Lactoylglutathione lyase and related lyases + Prom 45349 - 45408 7.2 45 11 Tu 1 . + CDS 45454 - 46707 1458 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Prom 47108 - 47167 3.9 46 12 Op 1 . + CDS 47192 - 47824 747 ## COG0693 Putative intracellular protease/amidase 47 12 Op 2 . + CDS 47903 - 48151 341 ## FN0956 hypothetical protein 48 12 Op 3 . + CDS 48154 - 48681 695 ## FN0955 hypothetical protein 49 12 Op 4 . + CDS 48710 - 49612 988 ## gi|294782790|ref|ZP_06748116.1| hypothetical protein HMPREF0400_00770 50 12 Op 5 . + CDS 49681 - 50580 1025 ## gi|262067173|ref|ZP_06026785.1| hypothetical protein FUSPEROL_01440 51 12 Op 6 . + CDS 50573 - 51151 400 ## gi|262067172|ref|ZP_06026784.1| putative membrane protein + Prom 51201 - 51260 12.6 52 13 Op 1 . + CDS 51294 - 52544 1341 ## COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif 53 13 Op 2 . + CDS 52581 - 53312 457 ## FN0953 hypothetical protein 54 13 Op 3 6/0.000 + CDS 53325 - 54335 1312 ## COG2073 Cobalamin biosynthesis protein CbiG 55 13 Op 4 4/0.000 + CDS 54328 - 55077 1192 ## COG1010 Precorrin-3B methylase + Prom 55119 - 55178 8.2 56 13 Op 5 1/0.364 + CDS 55208 - 55954 1003 ## COG2099 Precorrin-6x reductase + Term 55966 - 56002 3.1 57 14 Op 1 1/0.364 + CDS 56016 - 60440 4817 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 58 14 Op 2 . + CDS 60427 - 61545 1131 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 61667 - 61703 -0.7 + Prom 61643 - 61702 12.4 59 15 Tu 1 . + CDS 61760 - 62959 1523 ## COG0786 Na+/glutamate symporter + Term 62974 - 63036 7.7 + Prom 63002 - 63061 7.7 60 16 Tu 1 . + CDS 63100 - 63894 974 ## COG0796 Glutamate racemase + Term 64101 - 64136 1.1 + Prom 63899 - 63958 10.3 61 17 Op 1 32/0.000 + CDS 64164 - 65171 1007 ## COG1135 ABC-type metal ion transport system, ATPase component 62 17 Op 2 22/0.000 + CDS 65161 - 65862 968 ## COG2011 ABC-type metal ion transport system, permease component 63 17 Op 3 . + CDS 65878 - 66663 1094 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 64 18 Op 1 . - CDS 66926 - 67474 782 ## COG0693 Putative intracellular protease/amidase 65 18 Op 2 . - CDS 67490 - 68395 1044 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 68531 - 68590 12.0 + Prom 68380 - 68439 10.7 66 19 Op 1 . + CDS 68682 - 70256 1886 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 67 19 Op 2 . + CDS 70257 - 72056 2554 ## Sterm_0484 thioredoxin domain protein 68 19 Op 3 24/0.000 + CDS 72068 - 72820 820 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 69 19 Op 4 17/0.000 + CDS 72833 - 73609 1051 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 70 19 Op 5 . + CDS 73624 - 74661 1319 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 71 20 Tu 1 . - CDS 74791 - 76611 2264 ## COG0457 FOG: TPR repeat - Prom 76639 - 76698 12.9 + Prom 76556 - 76615 8.8 72 21 Op 1 35/0.000 + CDS 76809 - 78548 193 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 73 21 Op 2 . + CDS 78560 - 80359 2330 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Prom 80430 - 80489 11.5 74 22 Op 1 . + CDS 80516 - 81424 1120 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 75 22 Op 2 3/0.000 + CDS 81434 - 82528 1144 ## COG0859 ADP-heptose:LPS heptosyltransferase 76 22 Op 3 . + CDS 82525 - 83382 789 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 77 22 Op 4 . + CDS 83394 - 84110 713 ## FN1240 lipopolysaccharide core biosynthesis protein RfaY + Prom 84233 - 84292 8.4 78 23 Op 1 . + CDS 84461 - 84778 400 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 79 23 Op 2 8/0.000 + CDS 84771 - 85529 846 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 80 23 Op 3 25/0.000 + CDS 85554 - 86744 1216 ## COG0438 Glycosyltransferase 81 23 Op 4 . + CDS 86746 - 87816 939 ## COG0438 Glycosyltransferase 82 23 Op 5 . + CDS 87813 - 89003 748 ## Sterm_3102 hypothetical protein + Term 89011 - 89056 4.5 - Term 88999 - 89044 4.5 83 24 Op 1 . - CDS 89054 - 89881 949 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 84 24 Op 2 . - CDS 89920 - 90903 1447 ## Sterm_1566 hypothetical protein 85 24 Op 3 . - CDS 90975 - 91391 624 ## Sterm_1566 hypothetical protein 86 24 Op 4 1/0.364 - CDS 91407 - 92147 921 ## COG3713 Outer membrane protein V 87 24 Op 5 1/0.364 - CDS 92144 - 93943 2130 ## COG0438 Glycosyltransferase 88 24 Op 6 2/0.000 - CDS 93954 - 94847 1115 ## COG1032 Fe-S oxidoreductase 89 24 Op 7 . - CDS 94871 - 95674 1061 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 95747 - 95806 12.0 90 25 Tu 1 . - CDS 95842 - 96129 496 ## FN0514 hypothetical protein - Prom 96160 - 96219 5.2 - Term 96148 - 96206 11.1 91 26 Op 1 21/0.000 - CDS 96221 - 97234 1526 ## COG1984 Allophanate hydrolase subunit 2 92 26 Op 2 1/0.364 - CDS 97227 - 97976 962 ## COG2049 Allophanate hydrolase subunit 1 93 26 Op 3 7/0.000 - CDS 97990 - 99177 1668 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family 94 26 Op 4 . - CDS 99195 - 99965 1190 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B - Prom 100192 - 100251 78.9 + TRNA 100175 - 100251 79.4 # Arg TCG 0 0 - Term 100308 - 100355 8.1 95 27 Op 1 1/0.364 - CDS 100369 - 100884 756 ## COG0778 Nitroreductase 96 27 Op 2 1/0.364 - CDS 100947 - 101741 1081 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Prom 101801 - 101860 4.8 - Term 101829 - 101859 -0.6 97 28 Op 1 11/0.000 - CDS 101988 - 103277 662 ## PROTEIN SUPPORTED gi|149195935|ref|ZP_01872991.1| Ribosomal protein L16 98 28 Op 2 11/0.000 - CDS 103293 - 103763 507 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - Prom 103795 - 103854 7.8 - Term 103780 - 103819 1.2 99 28 Op 3 . - CDS 103857 - 104900 298 ## PROTEIN SUPPORTED gi|90020579|ref|YP_526406.1| ribosomal protein L22 - Prom 105036 - 105095 10.7 + Prom 105025 - 105084 13.1 100 29 Tu 1 . + CDS 105184 - 105777 634 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 101 30 Op 1 40/0.000 - CDS 105778 - 107082 1402 ## COG0642 Signal transduction histidine kinase 102 30 Op 2 . - CDS 107086 - 107760 721 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 107801 - 107860 7.3 + Prom 107835 - 107894 8.5 103 31 Tu 1 . + CDS 107983 - 109542 1505 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family + Prom 109569 - 109628 9.3 104 32 Tu 1 . + CDS 109664 - 109909 377 ## gi|237744984|ref|ZP_04575465.1| conserved hypothetical protein + Term 110115 - 110152 0.4 Predicted protein(s) >gi|292606576|gb|ADGG01000034.1| GENE 1 108 - 293 139 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782743|ref|ZP_06748069.1| ## NR: gi|294782743|ref|ZP_06748069.1| hypothetical protein HMPREF0400_00723 [Fusobacterium sp. 1_1_41FAA] # 1 61 1 61 61 114 100.0 2e-24 MRIWYRCDGSESRKNILDGARLNPKHYDNRQSAAKPEKESSTTIPREGSTIQAIGIGSGF A >gi|292606576|gb|ADGG01000034.1| GENE 2 301 - 453 115 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 2 50 41 89 89 93 93.0 5e-18 MLVMRHVLVGYELHEDFSKHIGKLVCRHGAKPCNKETELLGTLKASITTT >gi|292606576|gb|ADGG01000034.1| GENE 3 491 - 859 241 122 aa, chain - ## HITS:1 COG:no KEGG:FN1061 NR:ns ## KEGG: FN1061 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 122 1 122 184 160 79.0 1e-38 MIYKLNLLGFLLIVVAFFLGIKLPDWDFKLKLRHRNILTHSPFVTVIFIALYETDTSYFF KYFIVGFSSAIAIHILFDLFPRKWHGGALLKIPFNGITCSKETTKLFFIATSLVSVFLAI FY >gi|292606576|gb|ADGG01000034.1| GENE 4 1104 - 2108 1526 334 aa, chain + ## HITS:1 COG:FN1172 KEGG:ns NR:ns ## COG: FN1172 COG0280 # Protein_GI_number: 19704507 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Fusobacterium nucleatum # 1 334 4 337 337 602 94.0 1e-172 MSFLGQVRKKALQANRRIVLPETSDERVIRAASLILKENLAQVVLVGNQEAIMNSAKAYE VSLAGAKIVDPYNFERMNDYVNKLVELRAKKGMTPEEAKKLLLNDPNFFGAMLIKMGDAD GMVSGSASPTANVLRAAIQVIGTQPGVKTVSSVFIMELSQFKDLFGSILVFGDCSVIPFP TSEQLADIATSAAETAVKIAGINPRVALMTFSTKGSAKHECVDRVIEAGRILRERKVSFR FDDELQADAALVKSVGEIKAPLSDVSGNANVLIFPTLSAGNIGYKLVQRLAGANAYGPII QGLNAPVNDLSRGCSVEDIVVLTAITSAQACTEC >gi|292606576|gb|ADGG01000034.1| GENE 5 2127 - 2645 756 172 aa, chain + ## HITS:1 COG:FN1233 KEGG:ns NR:ns ## COG: FN1233 COG2249 # Protein_GI_number: 19704568 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Fusobacterium nucleatum # 3 169 6 179 180 110 38.0 1e-24 MKKTLIILAHPDLTRSMANKKLKEEAEKNTDIIVHDIYKEYPNGKINLEKELNLVKETGT LVLQFPMQWFNCPSLLKEWIDTVFMAAHFTESDEKILANKKIGLAVTTGAPKEVYEGKLE GILAPFVLSIDYLNAKNIPIFSVHGVMPGKISETEIEENAKKYVEYLKNNIE >gi|292606576|gb|ADGG01000034.1| GENE 6 2659 - 3855 1875 398 aa, chain + ## HITS:1 COG:FN1171 KEGG:ns NR:ns ## COG: FN1171 COG0282 # Protein_GI_number: 19704506 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Fusobacterium nucleatum # 1 398 1 398 398 770 96.0 0 MKILVINCGSSSLKYQLVNPETEEVFAKGLCERIGIDGSKMEYEVPAKDFEKKLEAPMPS HKEALELVISHLTDKEIGVIASVDEVDAIGHRVVHGGEEFAQSVLIDDAVLKAIEANNDL APLHNPANLMGIRTCMELMPGKKNVAVFDTAFHQTMKPEAFIYPLPYEDYKELKVRKYGF HGTSHLYVSGIMREIMGNPEHSKIIVCHLGNGASITAVKDGKSIDTSMGLTPLQGLMMGT RCGDIDPAAVLFVKNKRGLTDAQMDDRMNKKSGILGLFGKSSDCRDMENAVKEGDERAIL AESVSMHRLRSYIGAYAAVMGGVDAICFTGGIGENSSMTREKALEGLEFLGVDLDKEVNS VRKKGIVKLSKDSSKVLVYKIPTNEELVIARDTFRLAK >gi|292606576|gb|ADGG01000034.1| GENE 7 3942 - 7511 4800 1189 aa, chain + ## HITS:1 COG:FN1170_1 KEGG:ns NR:ns ## COG: FN1170_1 COG0674 # Protein_GI_number: 19704505 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Fusobacterium nucleatum # 1 410 1 410 410 809 96.0 0 MAKKMQTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYTDEWAAKGMKNIFGVPVKLVE MQSEGGAAGTVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARSLSAQA LSIFGDHQDIYAARQTGFAMLATNSVQEVMDLAGVAHLAALKSRVPFLHFFDGFRTSHEI QKVEVMEYDDLKKLVDWKALEEFRKRALNPEHPVTRGTAQNDDIYFQAREVQNKFYDAVP DIVADYMKEISKITGREYKPFNYYGAPDAERVIIAMGSVCEAAQEVIDYLVEQGEKVGLI SVHLYRPFSAKYFFDVLPKTVKRISVLDRTKEPGSLGEPLLLDIKALFYNKENAPLIVGG RYGLSSKDTTPAQILAVFENLKKDEPKDAFTVGIVDDVTHTSLEVGPAIALADPSTKACL FYGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKKPIRSTYLV SKPTFVACSVPAYLHQYDMTSGLKEGGKFLLNCVWTKEEAIENIPNNVKRDLAKNKARLF IINATALAHEIGLGQRTNTIMQAAFFKLAEIIPFEEAQQYMKDYAKKSYAKKGDEIVQLN YNAIDRGANDIVEIEVDPAWANLEATALNEPKETAGCGGCCASVPDFVKNIAKPINAIKG YDLPVSAFLGYEDGTFENGTSAFEKRGVAVDVPIWNIDKCIQCNQCSYVCPHAVIRPFLI NEEELKASPIELATKKPTGKGLDGLGYRIQVSTLDCVGCGSCAHVCPAKALDMMPIADSL NDKEDIKADYLFNNVEYRSDLMPLDTVKGSQFAQPLFEFHGACPGCGETPYIKLITQLYG NRMMVANATGCSSIYSGSAPSTPYTTDANGEGPSWASSLFEDNAEYGFGMHIGVEALRSR IQHTMEENMDKVDEEIATLFKDWIANRQYSVRTREIRDILLPKLEALNTEFAKEILDLKQ YLVKKSQWIIGGDGWAYDIGYGGLDHVLASNEDVNILVVDTEVYSNTGGQASKSTPTGAV AKFAASGKPVKKKDLAAIAMSYGHIYVAQVSMGANQQQVLKAIKEAEAHQGPSLIIAYSP CINHGIKKGMSQSQTEMKLATECGYWPIFRYNPSLEKLGKNPLQLDSKEPKWEKYEEYLT GEVRYQTLTKSNPEEAKVLFESNKKEAQKRWRQYKRMAALDYTEEKEEE >gi|292606576|gb|ADGG01000034.1| GENE 8 7727 - 8539 1247 270 aa, chain + ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 1 270 1 270 270 514 93.0 1e-146 MKDISFLKEKAKEIRKSIVSMITEAKSGHPGGSLSATDILTALYFSEMNIDPANPKMEGR DRFVLSKGHAAPAIYATLAERGYFSKDELLTLRKFGSRLQGHPDMKKLPGIEISTGSLGQ GLSVANGMALNAKIFNENYRTYIVLGDGEVQEGQIWEAAMTAAHYKLDNLCAFLDSNNLQ IDGNVTEIMGVEPLDKKWEAFGWNVIKIDGHNFEEILSALEKAKECKDKPTMILAKTVKG KGVSFMENVCGFHGVAPTAEELEKALAELA >gi|292606576|gb|ADGG01000034.1| GENE 9 8562 - 9491 1541 309 aa, chain + ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 1 309 1 309 309 572 95.0 1e-163 MSKKSTRQAYGEALVELGRINNDIVVLDADLSKSTKTDLFKKEFPKRHLNIGIAEADLIG TAAGFATCGKIPFASTFAMFAAGRAFEQIRNTVAYPKLNVKIAPTHAGISVGEDGGSHQS IEDIALMRAIPGMVVLCPCDAVETKKMVQAAAEYNGPVYLRLGRLDVETVLDDSYDFQIG IANTLREGNDVTIVSTGLLTQEALKAADELAKENISVRVVNCGTIKPLDGETILKAAKET KFIITAEEHSVIGGLGSAVSEFLSETHPTLIKKLGVYDKFGQSGKGAEMLEKYELTAAKL VSMVKENLK >gi|292606576|gb|ADGG01000034.1| GENE 10 9745 - 10467 1054 240 aa, chain - ## HITS:1 COG:no KEGG:FN0296 NR:ns ## KEGG: FN0296 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 240 16 255 255 377 80.0 1e-103 MCTVDEKAASIRLNFALTEIAPVEDYTHRLTIFIKMNNPTEDGLSSNEEYPILCDIEDEV VDKLETLEDIFAGTVKTQGRLELYLFTKNPEKSEELCKEALAKFPDYLWKTYIDEDKEWD FYYNFLYPDVYSYQAIMNRSVIENLLENEDKLEKEREIDHWLYFKIEENANLAIKKFEEL AYKILSSKKLEDKSEHKYQVNISRVDNAIYSHINEIVWELVEIAESLDGYYDGWGCNITK >gi|292606576|gb|ADGG01000034.1| GENE 11 10543 - 11415 835 290 aa, chain - ## HITS:1 COG:all0924 KEGG:ns NR:ns ## COG: all0924 COG4296 # Protein_GI_number: 17228419 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 209 290 63 145 145 69 46.0 9e-12 MEKIQEIHKEILEGNTDILKDFPLPYCLSENKEDFVVLRKARIVKEENHIKYFFPNSESN ESNSIYCLIWGRKNEESYGIGGTPIPDDFPIKEMKFEANKLFLLSTEDEKIVASLKQFNK ALQKVWRNFTMEELSVAFREAPDTVLDEIKQENMPKTVTIKNFGKFTYKKDDKAYKLVKE GIEYYFSADNKSELKKVKDIFLNIEVIDFIEKAKEYTVKKLLKLKNDLWLEEDEKEVTKK EFKARMKFTSLYVFSESANFYFDDGDLFWGHSIEVNINQNLEFFDANIVG >gi|292606576|gb|ADGG01000034.1| GENE 12 11433 - 12038 920 201 aa, chain - ## HITS:1 COG:no KEGG:CLH_2545 NR:ns ## KEGG: CLH_2545 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 191 1 191 193 246 66.0 5e-64 MDILEKILNNPELTEKIRLKCDIELYPELQDLYDEDGHITWNIEGKAFGADGSGGEFVLL SDGTIGFNSSEGETGRIAENMKELFSLLVNCPCFFDFLMPDIYDDKALLKKYADKIEKEY REEFNDITDYDWDEIKREIAKELDLSVDDNIAENTLIKFYEIATREPQYQATYHEDDGTL TPSEPLISRPMGEWIRKKIGE >gi|292606576|gb|ADGG01000034.1| GENE 13 12170 - 13393 1272 407 aa, chain + ## HITS:1 COG:FN0297 KEGG:ns NR:ns ## COG: FN0297 COG2256 # Protein_GI_number: 19703642 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Fusobacterium nucleatum # 1 407 1 407 407 739 92.0 0 MNLFQNNYKNVEPLAYKLRPKNLDDFVGQEKLLGKDGVIRRLILNSALSNSIFYGPPGCG KSSLGEIISNTLDCNFEKLNATTASVSDIRTVVETAKRNIELYNKRTILFLDEIHRFNKN QQDALLSYTEDGTLTLIGATTENPYYNINNALLSRVMVFEFKALTNEDISKLIDKGLNFL NISMSDKIKEIIIDIAQGDSRIALNYVEMYNNIHSQMTEDEIFSIFKERQVSFDKKQDKY DMISAFIKSVRGSDPDAAVYWLARLLDGGEDPKYIARRLFIEASEDIGMANPEALLIANA TMNACERIGMPEVRIILSHATVYLAISSKSNSVYEAINNALSDIKNGELQEVPLNICHDN VGYKYPHSYSDNFVKQKYMNKKKKYYKPGNNKNEKMIAEKLNKLWNE >gi|292606576|gb|ADGG01000034.1| GENE 14 13405 - 14643 1648 412 aa, chain + ## HITS:1 COG:FN0298 KEGG:ns NR:ns ## COG: FN0298 COG0124 # Protein_GI_number: 19703643 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 412 1 413 413 702 86.0 0 MELIRKPKGTKDIIGEDAVKYIYISNVTQEMFENYGYKFAKTPIFEETDLFKRGIGEATD VVEKEMYTFKDKGDRSITLRPENTASMVRCYLENSIYAKEDVSRFYYNGSMFRYERPQAG RQREFNQIGVEVFGEKSPILDAEVIAMGYNFLTKLGITDLEVKINSVGSKGSRTIYREKL VEHFQSHLDDMCEDCKDRINRNPLRLLDCKVDGDKDFYKSAPSIIDYLFEDERKHYEEVK KYLTIFGVKFTEDPTLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKELGDKDIP AFGFAAGVERVMMLVEDYPKDVPDVYIAWLGDDTIETAMKIAETLRKNNAKVYVDYSSKG MKSHMKKADKLETKYCIILGEDELNKGIVLLKDFSTREQKEVKIEEIINHIK >gi|292606576|gb|ADGG01000034.1| GENE 15 14661 - 16439 2436 592 aa, chain + ## HITS:1 COG:FN0299 KEGG:ns NR:ns ## COG: FN0299 COG0173 # Protein_GI_number: 19703644 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 592 1 592 592 1127 94.0 0 MIYRTHNLAELRVKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEK VLEEVQKLKSESVIRVVGEVKERSNKNPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDI EMSFVEKEDVMNEIEGLAKYVFKNVTGEEANYTFQRMPYAEAMDRFGSDKPDLRFAVELK DLSDIVKNSSFNAFSSTVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKGLAYI KLGADGISSPIAKFLTEDEMKAIIEKTEAKTGDLIFIVADKKKVVAAALGALRLRIGKDL DLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTEDIRTNTYD LVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFIDAFKYGAPPHGGLAFGI DRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFIKSTFEK >gi|292606576|gb|ADGG01000034.1| GENE 16 16485 - 17342 1185 285 aa, chain - ## HITS:1 COG:alr3188 KEGG:ns NR:ns ## COG: alr3188 COG1397 # Protein_GI_number: 17230680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Nostoc sp. PCC 7120 # 1 234 5 234 266 221 47.0 1e-57 MIGAMIGDIIGSVYEFKDNVEDKNFKLFVSYAMTTDDSIMTLAVGQALVNTYEEKETVKI QEELVKQLQKFGREYPYGGYGLRFKKWLKEDNPQPYNSYGNGSGMRVSSVAWLYDNLDDV NKYAEITASVSHNHPEGIKGACAIASAIYLARKKKTKDEIKKYIEDKFGYNFEPISSVRK WHTFDETCQVTVPIAIQAFLEGKDFEDVLRTAIYAGGDSDTIACMACSIAETYYEIPDKF IEFCYPKISPSMKIALKNILLLVKKQNRLNNNLEKVLNLLKKENV >gi|292606576|gb|ADGG01000034.1| GENE 17 17362 - 18138 379 258 aa, chain - ## HITS:1 COG:no KEGG:TTE0399 NR:ns ## KEGG: TTE0399 # Name: not_defined # Def: hypothetical protein # Organism: T.tengcongensis # Pathway: not_defined # 1 258 1 259 259 110 34.0 5e-23 MKKYLNAFKSEIITNLIIAKNYKFSFLMDIGIFISILSFLILSKSGYKYTLYYSKNFDFR ELVLIAYIMWIISLSAINTICSEIRSENIQGTLELKFMSILPFQILLLGKILSTLLIQIL EIIVVLLFTKFVFNLSIGINLKIIGIMLLTYIGMYGFSLVVGSLILSKKKIGQLNMIIQI LLLVFSNVFTISNIGFFSYLIPLGIGNHLIHLSYLKEEISSSKLLIFIFVCLLWIIIGQY LFNKAINYVKEKGTLSSY >gi|292606576|gb|ADGG01000034.1| GENE 18 18135 - 18833 207 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 215 1 226 245 84 25 2e-15 MLVLNNVNKSFKNIEVLKNISFTVKENKIFAFLGPNGVGKTTLIKIISGLISADSGTVLL DDKKISMDKISTMFDGSRNLYWNISVRENFYYFTALKGKLKKEVDYLLEKNKELFQIDNL LDKKYGELSLGQKQIVSVINTLLSSPELACFDEPSNGLDIYYEEKLIQIISNYIKNDSNK IIISSHDINFLYKVVDNFIVINKGEIIGEFSKNNLSLEEVTAKYLEFLEGKK >gi|292606576|gb|ADGG01000034.1| GENE 19 19197 - 21395 2584 732 aa, chain + ## HITS:1 COG:FN0311 KEGG:ns NR:ns ## COG: FN0311 COG1328 # Protein_GI_number: 19703656 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Fusobacterium nucleatum # 5 732 1 728 728 1412 95.0 0 MEAVMKRVIKRDGSVIEFDKKRIINAISKTFIQASREPNMKLIEKIATQVEELPSKVLSV EEIQDIVVKKLMASSEKDIAMSYQSYRTLKAEIRDREKGIYKQISELVDASNEKLLSENA NKDAKTISVQRDLLAGISSRDYYLNKIVPKHIKLAHIKGEIHLHDLDYLLFRETNCELVN IETMLRGGCNIGNAKMLEPNSVDVAVGHIVQIIASVSSNTYGGCSIPYLDRALVRYIKKT FKKHFLRGAKYIDDLKEEEIEELKKENLEYSNQFIKNKYPKTYEYSVDMTEESVKQAMQG LEYEINSLSTVNGQTPFTTIGIGTETSWEGKLVQKYVLKTRMAGFGAKKETAIFPKIVYA MCEGLNLNEEDPNWDISQLAFECMTKSIYPDILFITDEQLKNETVVYPMGCRAFLSPWKD ENGKEKYAGRFNIGATTINLPRIAIKNRGDEEGFYRELDRILEICKDNCLFRAKYLENTV AEMAPILWMSGALAEKHQKDTIKDLIWGGYSTVSIGYIGLSEVSQLLYGKDFSESEEVYE KTFNILKYMADKILEYKQKYNLGFALYGTPSESLCDRFARVDKQEFGDIKGITDKGYYDN SFHVSSRINMSPFEKLRLEALGHKYSAGGHISYIETDSLTKNLEAIPEILKYAKMVGIHY MGINQPVDKCHICGYKGEFTATKEGFTCPQCGNHDSNEMSVIRRVCGYLSQPNARPFNKG KQEEIMHRVKHS >gi|292606576|gb|ADGG01000034.1| GENE 20 21400 - 21906 469 168 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 168 1 168 168 296 89.0 1e-80 MNYSGIKYADMINGRGIRVSLFVSGCTHACKNCFNEETWKETYGKKFTEKEEDEIIDYFK KYGKTIRGLSLLGGDPTYPKNIKTLLKFIKKFKENLPDRDIWIWSGFTWEEILEDENRFS LIKECDILIDGKYMDNLKDLNLKWRGSSNQRVIDIKKSLENNIIVEYI >gi|292606576|gb|ADGG01000034.1| GENE 21 21947 - 25015 3291 1022 aa, chain - ## HITS:1 COG:FN0515 KEGG:ns NR:ns ## COG: FN0515 COG0841 # Protein_GI_number: 19703850 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 1022 1 1022 1022 1715 86.0 0 MKIIEYSIKNKIVVLFATFVLTLAGIISYFRLGKLEDPEFKVKEAIVVTLYPGASPESVE QEVTDKIEMALRKIPNADIDSVSKASYSEVHIKIDESTPSDKVDQEWDVVRKKINDVKTS LPLGALPPIVLDDYGDVYGMFFAITSEGFSKEELYNYAKEIRKELEKTDGVAKTTLFGNS DTVIEVLVDRDKIASLGINEKMIALAFTGQNIPAYANSVLHGDKNLRFDIDQSFESIEDI ENLVIYSTPAVLSIQKPTTVLLKDIAEVRRTEVKPYTTKMRYNGKEAIGLMLSPVSGTNV VETGKEISKKIELLKEDLPHGIEIEKVYYQPELVSTAINQFIINLVESVIVVVGVLLITM GIRSGLIIGSGLILSILGTLIAMLAMKIDLQRVSLGAFIIAMGMLVDNSIVVVDGVLDSL DNGDNKYTALTKPTSKTAIPLLGATFIAVIAFLPMYMMPTTAGEYIKSLFWVVAISLGLS WIISLTQTTVFCDIYLSENDFKGVESKGKLFHNRFVVILEKILIYKKLSMIVLLGAFFLS LLLFIKVPLSFFPESDKKGFVINLWNPEGTDIEYTNKINQVVESEVLKQEGVVSVTSAIG GSPSRYYISSIPELPNTALSQLIISVEKLEYINKIGEDVKDFVDNNFPDTRVEIRKYTNG IPTRYPIQLRIVGEDSNILREYSKKFENILRNIDGAENIQTDWKEKQLVIKPEIDKVKER ESLVTALDIASSLNRTTNGIKIGTFKDGEENIPVLFKEKNDGREFNINNLGQVPVWGLGP RSIPFRELIKKENLVWENPIIVRKDGFRAIQIQADVKNGYRVEAVRKEFVKAIKESEIEL PKGYKLEWSGEFYEQEKNTEEIISYIPLQLIIMFMTCVLLFGNLRDPFIIFGVLPLSFIG ILPGLFITGRTFGFMAIIGTISLSGMMIKSGIVLIDQIRYEIYTLNKEPFKAVIDSSASR IRAVILAAGTTVLGMIPLMFDPLFSDMAITIVFGLTVATLLILFVVPLLYSIFYKIDKPK EN >gi|292606576|gb|ADGG01000034.1| GENE 22 25012 - 26082 1155 356 aa, chain - ## HITS:1 COG:FN0516 KEGG:ns NR:ns ## COG: FN0516 COG0845 # Protein_GI_number: 19703851 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 15 356 16 357 357 506 81.0 1e-143 MKKYILVILLICLFTACKKEAKEEVIRSVKIQEINSMQDENFNIDFPAQISPSQKTVLAF KYAGKIKNINFESGDFVKKGQVIAIIDDTDYKVNLDAFSKKYEAAKAVAQNAEQQFARAE KLYKGDALAKKDYDNALMQRNVAISTFKEASAGLQNARNTLTDTKIVAPYDGYIDKKVAN VGTVVPEGGPVVSFISNEITDISINASVKDIDYIKNAENISFKDSTKDKIYSLKIKSIAQ NPDSINLTYPVVFTFSELNENDKFLSGQTGTVTIAVKNKGKEEILIPINAIFEDKGSNVY LFKDGQAVKTPIEIGELRETDKISVVKGLKTGDKVIVAGVSKLADGDKVKLLGGNK >gi|292606576|gb|ADGG01000034.1| GENE 23 26091 - 27533 1705 480 aa, chain - ## HITS:1 COG:FN0517 KEGG:ns NR:ns ## COG: FN0517 COG1538 # Protein_GI_number: 19703852 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Fusobacterium nucleatum # 32 480 1 449 449 658 81.0 0 MTVRSYGWRDRMKIRSSLIFVSLILLVSCSKVNIENENNDMISRLREKKESTEKLRIEKE GMIDLEEAVDLALKNNTQIKLKEIESQIAKIDKNISFGNFLPRISAIYSISELDRYMSAT IPAPDVTIGVLGGITLPSLPVTLTSRMVDKDFRNYALSAQLPIFVPATWFLYSAREKGEN ISLYTENLTKKMIKLKVISEYYYTLALASEKNVLEKEYAYAQKLNKNAKLALKTGSILKW QEEETELLVKQKENALKNNERDLKIAKMNLMNDIGLDPYAEFRLVIPEDTVYKLPPLEDV VYDALVNSEVIKINHNLVAISKDKIKIAMSRFLPQISLDAGLVGTSVSYLNPQNILFGAI TGFLSLFNGFKDVNEYKKAKLQSEAAYIQREDAIMNTIISAVNSYNNVQKSIEDKELADL NYNVAKKKFKQKELEVEVGSATDTDLLKAMSELEKAESIKLKTEYKYSVSVETLKMLIEK >gi|292606576|gb|ADGG01000034.1| GENE 24 27797 - 28876 1201 359 aa, chain + ## HITS:1 COG:FN0973 KEGG:ns NR:ns ## COG: FN0973 COG0079 # Protein_GI_number: 19704308 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Fusobacterium nucleatum # 3 358 2 357 357 590 87.0 1e-168 MTKDLHGGNIYKFQREGKNDILDYSSNINPLGVPQKFINIAKESFDKLVNYPDPYYIDLR KKIAEFNSLDLSNIIVGNGATEILFLYLKALKPKKVLILAPCFAEYERALKSVSAEINYF ELKESDNFYPNIENLKREIETNSYDLLLFCNPNNPTGQFIKLEYIKKVVEVCENKNTKIF VDEAFIEFIENWQEKTVSLFKNKNIFIMRAFTKFFAIPGLRLGYGIGFDDEILNKMWDEK EPWTVNTFANLAGLVMLDDKEYIEKSEKWILEEKKFMYKELSEFQYLKAYKTECNFILLK IQNISSASLRDKMIEKNILIRDASNFKFLDYHFVRLAIKDRESNIKVLEALADIMEYRG >gi|292606576|gb|ADGG01000034.1| GENE 25 28910 - 30244 1445 444 aa, chain + ## HITS:1 COG:FN0972 KEGG:ns NR:ns ## COG: FN0972 COG1797 # Protein_GI_number: 19704307 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Fusobacterium nucleatum # 1 444 1 444 444 756 82.0 0 MKAFMLAGVSSGIGKTTISMALMSAFANVSPFKVGPDYIDPGFHEFITNNKSYNLDLYMM GEQGVRYSFYKHHKDISIVEGVMGLYDGIDNSLDNNSSAHVARFLGIPVILVVDGVGKST SIAAQILGYKMLDPRVNIAGVIINKVSSEKTYAIFKEAIEKYTSVKCLGFIEKNEALNIS SRHLGLLQAEEVEDLRDKLFILKNLVLKNIDLEALEKIATEETRTINIDKDEIEYPLHLS ALKDKHKGKVIAIARDRAFSFYYNDNIEFLEYMGFRMAYFSPIKDKKVPYCDAIYLGGGY PENFAEELSNNKEMIESIKENYEQGKNILAECGGFMYLSHAIEQKDETLHQMCGLVPCTV VMNNRLDISRFGYISIRDKDDIEVAKGHEFHYSKLKTVLEDTRKFKAVKKDGRNWECIFH EKNMYAGYPHIHFFGSYKLLEELF >gi|292606576|gb|ADGG01000034.1| GENE 26 30244 - 31236 1158 330 aa, chain + ## HITS:1 COG:FN0971 KEGG:ns NR:ns ## COG: FN0971 COG3177 # Protein_GI_number: 19704306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 330 1 330 330 546 90.0 1e-155 MKKELSPPFKITNDILNLVYEIGELVGKISAEKEFEKNLTLRKENRIKTIYSSLAIEQNT LTLEQVTDVINGKRVLAPLKDIKEVQNAYEIYERLDELNENSMKDLLLAHKIMTSELIKE SGRFRSKNAGVYQGDKLIHMGTLPEYIPELIDNLFLWLKNSKEHPLIKAAVFHYEFEFIH PFQDGNGRIGRLWHSLILSKWKKFFAWLPIESLVQKYQKEYYIAINNSNKDGESTEFILF ILEIIKETLIELVETQKMTDKVIDKMTDKNKERVKLLMKYLGQNDSISNKEAQSLLGISE ATARRFLNSLVKENLLVAVGEYKARKYIKK >gi|292606576|gb|ADGG01000034.1| GENE 27 31264 - 31914 956 216 aa, chain + ## HITS:1 COG:FN0970 KEGG:ns NR:ns ## COG: FN0970 COG2082 # Protein_GI_number: 19704305 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Fusobacterium nucleatum # 1 216 4 219 219 384 94.0 1e-107 MSYIKVPGDIEKRSFEIIEEELGDKAKKFSESEMPIVKRIIHTSADFEYADLIEFQNNAI ESGLKALEKGCKIYCDTNMIVNGLSKPALSKYNCSAYCLVSDKEVIEEAKKEGLTRSIVG MRKAGKDPETKIFILGNAPTALYQLKEMIENGEIEKPALVIGVPVGFVGAAESKEEFKKL GIPYITINGRKGGSTIGVAILHGIIYQIYKREGFHA >gi|292606576|gb|ADGG01000034.1| GENE 28 31939 - 32721 562 260 aa, chain + ## HITS:1 COG:no KEGG:FN0969 NR:ns ## KEGG: FN0969 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 260 1 258 258 327 73.0 3e-88 MKIISKFKDFYDYKVTKYGVDEKLIYNRKTCYDYYKMKFQYLNLHKNIPEKVSVEDFDNI LKEHIKFFDKTNHNKILIVGEEIVHLFFTEDGVYTHFDIKNPKDIVGETIYKYWAYYDGT KEITFNDGKKIEIHITFNELWDDFFNYDRKRFLSYLNISKEEVLFNEPIILVEYIGGIDR KIARYDNSIYKFTYNPNLSQMGVYIDEDFIWQSLVEFLSNKRSEKEISPEVSNENKILSK GFDLKTSFRPNMKKKHKGDI >gi|292606576|gb|ADGG01000034.1| GENE 29 32718 - 33491 600 257 aa, chain + ## HITS:1 COG:no KEGG:FN0969 NR:ns ## KEGG: FN0969 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 257 1 258 258 287 67.0 2e-76 MKIISKFKDFYDYKVAKYGVDEKLVYTRKTYCEYYETNFISIYTSSDDRILEENFNKNLK EEVEYFKRNNCHKILILGEKLIHLFFTENGVYTHFDIKNPEDIKKKYGYYSYYNEVREIT FNDEKKFDIYSSFKYVWDELFSYDRKRFLPRVNISKDDILFNEPMILIECLGEIFNKKNS SDRIFIYKFTYNPILSKLGVYIDEDFIWQSLVEFLSNKRSEKEISPEVSNENKILSKGFD LKTSFRPNMKKKHKGDI >gi|292606576|gb|ADGG01000034.1| GENE 30 33488 - 34240 618 250 aa, chain + ## HITS:1 COG:no KEGG:FN0968 NR:ns ## KEGG: FN0968 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 245 1 246 247 271 68.0 1e-71 MKIISKFKDFYDYKVVKYGVDEKLVYTRKTYCEYFESLVIDVYTASDDRISEENFNKNLK ENFEYFRGINFHKILILGEKLIHLFFTENGVYTHFDAKKLDVSKGTYQSYCSKEITFNDG RNFEITTDFGWDKLFSYDRKKLFPSMRIDKSDIIFNEPMILIEYFGKSYNKNLKYHRPLY KFTYNPNLSQMGVYIDADFVWQSLVEFLSNKRSEKEISPEVSNENKILSKGFDLKTSFRP NMKKKHKGDI >gi|292606576|gb|ADGG01000034.1| GENE 31 34237 - 34983 588 248 aa, chain + ## HITS:1 COG:no KEGG:FN0969 NR:ns ## KEGG: FN0969 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 248 1 258 258 181 50.0 3e-44 MKIISKFRDFYDYKVVKYGMDEKLVYTRVTKNFRNSPRLFSINKTQPDYNNKILFVGDKI VLIFKTEEKLYTQFDLKDIELLKAKNSNVRVKNFSYYMKDSEITFLDGNTIFVNSFINID LYDLLKMNRRTFYNFFIKNKKDFFDMDEENNFFNEPIVLIEFLENVTDHDNRRSTSVYKK TYNPNLSQLGIYFDEDFIWQSLVEFLSNKRSEKEISPEVSNENKILSKGFDLKTSFRPNM KKKHKGDI >gi|292606576|gb|ADGG01000034.1| GENE 32 34980 - 35717 541 245 aa, chain + ## HITS:1 COG:no KEGG:FN0968 NR:ns ## KEGG: FN0968 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 245 1 247 247 325 79.0 8e-88 MKIISKFRDFYDYKVAKYGVDEKLVYIRKTYCEYFQVLIGNISNINIDYRISEDDFNKNL KDDINPIDEKNIHKILFIGEKLIHLFFTENGVYTHFDIKNENDLRKLNDFQYKKEITFKD GKKFNIFSKFGNDWDNLLSFNRKKLITYDIDKDDIILNEPMLLIELIGKSKSSRYLYIYK FTYNPNLSQMGVYIDADFIWQSLVEFLSNKRSEKEISPEVSNDNKILSKGFDLKTSFRPN MKKKK >gi|292606576|gb|ADGG01000034.1| GENE 33 35733 - 36860 1607 375 aa, chain + ## HITS:1 COG:FN0967 KEGG:ns NR:ns ## COG: FN0967 COG1903 # Protein_GI_number: 19704302 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Fusobacterium nucleatum # 1 375 1 375 375 701 96.0 0 MEEKELKNGYTTGTCATAAVKVALEALVYGKKATEVDITTLNYTNLKIPVQKLRVRNNFA SCAIQKYAGDDPDVTNGISICAKVQLVKELPKVDRGAYYDNCVIIGGRGVGLVTKKGLQI AIGKSAINPGPQKMITTVVNEILSGIDEKAIITIYIPEGRAKALKTYNPKMGVIGGISVL GTTGIVKAMSEDALKKSMFAELKVMREDKNRDWVIFAFGNYGERHCEKIGLDTEQMIIIS NFVGFMIEAAVKLEFKKIIMLGHIAKAIKVAGGIFNTHSRVADGRMETMASCAFLVDEKP EIIRKILFSNTIEEACDYIENNEIYHLIANRVAFKMQEYARADIEVSAAIFSFKGETIGE SDNYQRMVGECGAIK >gi|292606576|gb|ADGG01000034.1| GENE 34 36814 - 37500 846 228 aa, chain + ## HITS:1 COG:FN0966 KEGG:ns NR:ns ## COG: FN0966 COG2241 # Protein_GI_number: 19704301 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 1 # Organism: Fusobacterium nucleatum # 1 228 1 228 229 374 91.0 1e-104 MITIKEWLVNVVQSNKINVVGLGPGNIKYLSTSGIECIKEAEIIVGSTRQLSDLKAIISE KQEIYILGKLAELIAYLKENIERKITIIVSGDTGYYSLVPYLSKNLSKDILNIIPNISSY QYLFSKLGENWQNFRLASVHGREFDYVKNIDDKDIAGLVLLTDDIQNPYEVSKNLYNNGI RNLTVIVGENLSYDNEKITILEIEDYEKLNRKFDMNVLVLKKGENYGK >gi|292606576|gb|ADGG01000034.1| GENE 35 37490 - 38449 1277 319 aa, chain + ## HITS:1 COG:FN0965 KEGG:ns NR:ns ## COG: FN0965 COG1052 # Protein_GI_number: 19704300 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Fusobacterium nucleatum # 2 319 3 321 321 521 85.0 1e-148 MENKLKIIFLDRNTVGPFELKEIFSKYGEYTEFNLTNDDVASYLKDYDVVILNRIRLGKK EFEKAKHLKLVLLTGTGFNHIDLVAAKEHGVSIANVAGYSTNSVSQLTMTFLLNELTKVE KLSQKVKENKWNELSINMDNYYHVDTEDKILGILGYGNIGQKVAEYAKSFGMKVMVAKIP GRKYTDNSDNRYDLDEVLEKCDVFSIHAPLTDLTKDLINLDRMKKMKKSAIILNLGRGPI INEEDLYYALKNNIIASAATDVMTTEPPKNDCKLLELDNFTVTPHLAWKSQKSLERLFAA IENNLNLFLENKLIGVESK >gi|292606576|gb|ADGG01000034.1| GENE 36 38473 - 39042 872 189 aa, chain + ## HITS:1 COG:FN0964 KEGG:ns NR:ns ## COG: FN0964 COG2242 # Protein_GI_number: 19704299 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Fusobacterium nucleatum # 1 189 1 189 189 353 96.0 1e-97 MHIYDKEFTQTELPMTKQEIRAISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQGKVY AIEKEEKGLDTIKLNAEKFNLDNFELIHGKAPDAIPNIAYDRMFIGGSTGGLEEIINHFL TYAKDEAILVINCITLETQSKSLEILKEKGFKDIEVITVTVGRAKRVGPYTMMFGENPIC IIKVIKRNK >gi|292606576|gb|ADGG01000034.1| GENE 37 39193 - 40431 1491 412 aa, chain + ## HITS:1 COG:SP0298 KEGG:ns NR:ns ## COG: SP0298 COG1373 # Protein_GI_number: 15900232 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 1 410 1 400 402 343 49.0 3e-94 MIRIDREEYLDFLIKSKDKQIIKVVSGVRRCGKSTLFEIYKDYLLKNKVEKKQIISINFE DMDYEELTDYKKLYKYIKSKMIDNKKNYIFLDEIQHVDKFEKVVDSLFIKDNVDLYITGS NAYFMSSELATLLSGRYIELKMLPLSFKEYYQAKLKYEELEKKETKILKTLIQYYNEYIV NSSFPYTLQLKNNLKNIYEYLSGIYNSVLLKDIVARLKISDVMRLESVVKYIFDNIGNLT SISKIANTLTSMGRKTDTKTVEKYVKGLVDGLLIYEVNRYNIKGKEFLSTLSKYYVSDLG LRQMILGNRNIDMRHILENIIYLELLRRKANVYIGQFDKNEIDFVVINSNEVEYYQVALT ILDENTLKRELAAFKNIKDNYPKYLITLDNVLPNTDYEGIKIINALEWLLGE >gi|292606576|gb|ADGG01000034.1| GENE 38 40471 - 41175 550 234 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_0312 NR:ns ## KEGG: Fisuc_0312 # Name: not_defined # Def: hypothetical protein # Organism: F.succinogenes # Pathway: not_defined # 10 169 4 164 245 65 31.0 2e-09 MEELKIDESYDNELKEIEFYKNSTTHQYMLPYIGFNYQEHKVLLVAESHYLGNDEDRKKV ANFKEWYEDKGNISLSKKGYEHIHTRGVVQTWFSNGNGLFQKIKKELENANIDIKYFWER IAFMNFFIVPSTNGSREIYSTKEVEEKSLTNFEEVIKILKPNYILFLSKRSYYIFEKNNS EYLNKTFPFSHPTSIWWYRKRKDGKRAKGEFKEKIEIIFKSKNRKNSFQKMEDT >gi|292606576|gb|ADGG01000034.1| GENE 39 41179 - 41739 654 186 aa, chain + ## HITS:1 COG:no KEGG:FN0960 NR:ns ## KEGG: FN0960 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 161 1 159 164 195 67.0 6e-49 MQILLLIFKLLGFFINHASEKKKFYIDDKWTIELPPDWERIFLEIELELDNSPIFETIFF KPGSDLSIGVYYLNLLKDDNYRDVEADIPDVIAVFEEIMDKIEDKKEYKIPNYKSSKIKS YEYTYYKNDKKFYAIKTGFFMKGCLLRVNIASTIKKEVEKAMYYLFSIKQVDLKDITYFD KNNSYK >gi|292606576|gb|ADGG01000034.1| GENE 40 41776 - 42681 1029 301 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3574 NR:ns ## KEGG: Sterm_3574 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 263 1 245 265 84 30.0 4e-15 MKKILILIYFIFSISIIAEYYKKGNEVYYEGYDHKNGKFIDYNEKVEDVDLNSLEQINDF YARDKNRVYFRGKKTDIDRDYIQIVRLNLVKDRDFVYYEDKKLKVSPNDSLFVNRNVTNK SLPDINVGYGFYVKDFQNAYYVKIDEDRNIEEIKLEDANVDKLVSWNDILAKDGKNIYYY GKKIDYIDASTFDGRGFGYAKDKNNIYYDVTIVKNADYKSFKEIKGSISFAKDKYNIFYE GKIIEGADIKSFEPLKNGFSKDKYGYFYNEQRLEGINYEDIKDFMNTFGVDKKKVPGYKY K >gi|292606576|gb|ADGG01000034.1| GENE 41 42697 - 43419 1041 240 aa, chain + ## HITS:1 COG:FN0959 KEGG:ns NR:ns ## COG: FN0959 COG2243 # Protein_GI_number: 19704294 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Fusobacterium nucleatum # 1 240 9 248 248 429 97.0 1e-120 MTNKFYGIGVGVGDPEEITIKAINTLKKLDVVILPEAKKDDGSVAYEIAKQYMKEDVEKV FVEFPMLKSLEDRENARKENAKIVQKLLDEGKNVGFLTIGDTMTYSTYVYILEHLPEKYL VETVPGVSSFVDMASRFNFPLMIGDETLKVVSLNKKTNIEFELENNDNIVFMKVSRNFEN LKQALIKTGNIDKIIMVSNCGKESQKVYYDIKDLTEDDIPYFTTLIVKKGGFEKWRKFSI >gi|292606576|gb|ADGG01000034.1| GENE 42 43434 - 44114 736 226 aa, chain + ## HITS:1 COG:no KEGG:FN0958 NR:ns ## KEGG: FN0958 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 226 1 226 226 340 87.0 2e-92 MKKLLAILFLIIAIQGIAETVVKGTYETKRKRYVELTQTLEKEIFLNYTLPDNKKEIVTY KGKDFDILVSKNDLLELYNRRRVDKIDDIKNKISYKDEKFEYFRNYFSELIENNKAVVYD RKNEKEINYLIKVKYSNAIFYDKGRGSLYNGYNFYADKEWTELALQSDVITQFGVEIHSS IGDNPYNRELSPEAKKNFENNKSFNQRKELYEKAMQTPDVTQSFSY >gi|292606576|gb|ADGG01000034.1| GENE 43 44153 - 44926 1318 257 aa, chain + ## HITS:1 COG:FN0957 KEGG:ns NR:ns ## COG: FN0957 COG2875 # Protein_GI_number: 19704292 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Fusobacterium nucleatum # 1 257 1 257 257 456 94.0 1e-128 MEKYKEKVYFIGAGPGDPELITIKGQRIVKEADVIIYAGSLVPKEVIDCHKEGAEIYNSA SMSLDEVIDVTVKAIKANKKVARVHTGDPAIYGAHREQMDMLDEYGIEYEVIPGVSSFLA SAAALKKEFTLPTVSQTVICTRIEGRTPVPEKESLESLAKHRASMAIFLSVHMIDKVVET LATSYPMTTPVAVVQRASWPDQKIVLGTLETIEQKVKEAGINKTAQILVGDFLGNEYEKS KLYDKYFTHEYREAVKK >gi|292606576|gb|ADGG01000034.1| GENE 44 44944 - 45330 517 128 aa, chain + ## HITS:1 COG:CAC2466 KEGG:ns NR:ns ## COG: CAC2466 COG0346 # Protein_GI_number: 15895731 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Clostridium acetobutylicum # 1 128 1 130 132 103 44.0 1e-22 MKYNDLIPELVVSNINISRDFYVNMLGFKVEYEREEDKFIFLSLGNIQLMLEEGSEEELS QMEYPFGKGINFTFGVNNVDELYSKFKIKKNLLKRDIEVREFRVNDEIIYVKEFSIVDPD GYFIRISE >gi|292606576|gb|ADGG01000034.1| GENE 45 45454 - 46707 1458 417 aa, chain + ## HITS:1 COG:MA2370 KEGG:ns NR:ns ## COG: MA2370 COG2865 # Protein_GI_number: 20091202 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 3 415 11 446 458 119 25.0 1e-26 MKESKELELKSTITNTFLKTVSAFSNYNSGKIIFGVDDNGKIIGLENIEELCLDLENKIN DNISPKPDFKFIKDTKKNIITLIVEEGFNKPYLYKGKAYKRNDTSTVEVDRIELNRLTLL GLNQYYEELKARKQDLEFKVLTKELEEKLSLKDVSKDVLKTLNLYDDKIGYNNAAELFAD NNTFSGTDIAKFGKNIDEILDRNLFINMSIISQFQKTSEVFNRYYKYEQILGSERIEKEL IPEKAFRETIANALIHRTWDVNSNIRVSMYEDKIEISSPGGLPSGISEKEYLNGQISQLR NPILANIFFRLKYIEMFGTGIRRINESYKDYAVKPAFEIFENSIKITLPIIKTELFLTTD EKIIMDILEKGAILSSSEILKMTEFKKDKLNRLLKKLIQKNYIDIIGNGRGTKYLKK >gi|292606576|gb|ADGG01000034.1| GENE 46 47192 - 47824 747 210 aa, chain + ## HITS:1 COG:lin0465 KEGG:ns NR:ns ## COG: lin0465 COG0693 # Protein_GI_number: 16799541 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Listeria innocua # 1 209 1 211 212 163 44.0 2e-40 MKKICMYLMNGMADHEHGYLLTALSSQIKPKYEFCTVALTKEPIVTMGGLKIIPDYVLNE INKDDIIALILIGADIQLWLNKEQETILNLAVELLKRNILVAGICGATLGLASKGLLDER IHTSNIEFLLTNFVKSYKGIKNYKNDVVAVSDKNLITASSAGSLLWAKYILENLEIFSKT AIESWYKYYNLGISKYYIEFMEKISKEEDF >gi|292606576|gb|ADGG01000034.1| GENE 47 47903 - 48151 341 82 aa, chain + ## HITS:1 COG:no KEGG:FN0956 NR:ns ## KEGG: FN0956 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 82 1 82 82 115 73.0 4e-25 MKTLNKKTWQYEKHGIDGEVELFGVNIFDYKWENTNTVAILDPKYNNEYHFNVYKVIIDG KEYEFAAGEVSNNVWCFYLPKE >gi|292606576|gb|ADGG01000034.1| GENE 48 48154 - 48681 695 175 aa, chain + ## HITS:1 COG:no KEGG:FN0955 NR:ns ## KEGG: FN0955 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 173 1 173 175 294 90.0 1e-78 MKRKFINVTKEYIENLAPTDFCVELIQPAWETVNIYGSYEEYEESLKPYTTEQRYLLAMH WLGAEVDNGGFQQFLGNSTGIVWEDAYKGYQAIGSEKLAYLIEELIKVYGRNIPFDREER GNILESFSQEKLAEIDTITDLYYEIEEPEWRKVTLWVKANSEKFFIQAEINDYSR >gi|292606576|gb|ADGG01000034.1| GENE 49 48710 - 49612 988 300 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782790|ref|ZP_06748116.1| ## NR: gi|294782790|ref|ZP_06748116.1| hypothetical protein HMPREF0400_00770 [Fusobacterium sp. 1_1_41FAA] # 1 300 1 300 300 477 100.0 1e-133 MKNKIEESYNKCLNLFKEGKRDTEEYRKELENVIELAKDNNEFKLCYFNAKFRLAQFYNE KHKYDLSKKHFLELINDKNMKEFKLDAIMHHAYNLRILKKYDEATFWYEKLSELSTSKYY DEVVLEGLAKCATMVNDLEKERENYRILLSSCLNKEDFKGLAEKILNLRSQLLSTVDQKQ KEKINTEIIYLNNDLDTGYYKLIDLKMKIAKSYFNEKKYEDCRKEVETIFEFLEYSISDM QDYAITNANMILGKTYFEEANFEKAREYFEPIANTPKEDKYYKYMISDIHAARNFLAKMK >gi|292606576|gb|ADGG01000034.1| GENE 50 49681 - 50580 1025 299 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262067173|ref|ZP_06026785.1| ## NR: gi|262067173|ref|ZP_06026785.1| hypothetical protein FUSPEROL_01440 [Fusobacterium periodonticum ATCC 33693] # 1 299 1 299 299 392 100.0 1e-107 MEIKLKSYFIEIPDDRLNLFSKIKNKLDKNNLYDKIITDIQTIDIIDPKKFKSIKNDEKK IFKKENKLIGTVYYGKYGIERRVYNIENEEKEEITENEAIQDRYLYFINRFRDEKNSKDY IIFIIETKENKSPLEMFYYHFKNKYNLIIEAVTEKDIMEYFLKNSVIDMRYVSYKEKDVN NIFGKLLDEKEIVEIKPDIKKVELKIKLDSDLKEKEKIEILNSHFRSKISHDEYISLSLK NGRKIKITNQKVELDKYFYVEDVEKFYSEDGELLLEKIEGILDDNFEYIKNILIGGKNV >gi|292606576|gb|ADGG01000034.1| GENE 51 50573 - 51151 400 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262067172|ref|ZP_06026784.1| ## NR: gi|262067172|ref|ZP_06026784.1| putative membrane protein [Fusobacterium periodonticum ATCC 33693] # 1 192 1 192 196 190 99.0 4e-47 MFSWGIITIFIIIATFYIKWIFFDNTKDSKISFKEIFKNLDYLKTSKNKINMKDLLMFLI FPFIISITSIFILEIRIDFNNSLTLIISIISSILLNFWTILLTARDKMEKEKYKYVINLS SNIVLEIFISIIFIILFIFKELKLDFLDEIISKINLIKIIKTVYLFLILLYTINFLMILQ RIYLISNYEKKE >gi|292606576|gb|ADGG01000034.1| GENE 52 51294 - 52544 1341 416 aa, chain + ## HITS:1 COG:FN0954 KEGG:ns NR:ns ## COG: FN0954 COG4277 # Protein_GI_number: 19704289 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with the Helix-hairpin-helix motif # Organism: Fusobacterium nucleatum # 1 414 1 414 415 776 94.0 0 MSKSIEEKLRILSDAAKYDVSCSSSGSSRKNTNNGLGNAAINGICHSWSADGRCISLLKI LMTNYCIYDCKYCINRKDNDIERAILSPDEIVKLTINFYRRNYIEGLFLSSGIIKSADYT MELMIAVAKKLRLEEKFNGYIHMKVIPGASRQLINEIGLYVDRVSVNIEFAENTALKLLA PDKKATDISTSMGLIRKNMIENAEDKKIFKSTPSFIPAGQTTQMIIGASGESDYAILSRS ENLYKNFDLKRVYYSGYVPVNKSGILVSTEQAVPMIREHRLYQADWLLRFYDFKADEILD EKDPFVDPLLDPKTNWAIKNSHFFPIEVNKASYRDLLRVPGIGVTSAKRIVMTRKYSTIR YEHLKKLGIVIKRAKYFITINGEFLGFKKENPELLRNTLMEKEKMVTEQLRLFNGL >gi|292606576|gb|ADGG01000034.1| GENE 53 52581 - 53312 457 243 aa, chain + ## HITS:1 COG:no KEGG:FN0953 NR:ns ## KEGG: FN0953 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 243 1 243 243 407 88.0 1e-112 MANYYYDGSFDGLLTVIYMAYEDRENKMLRVNANTEQLILSLDGIHIVTDFSKARRVEKA ICEKLSYNFLNNIRTCFLSYDKNKDTVIIHTVYKALKQGEEILNSLDEHAFYVNKLVKQV LNERHKYLGLVRFKEMKDGTMFSTIEPKNNVLPILISHFKNRMKREKFAIFDSGRKMIVY YDGEKAEIFFVESLEIEWSDEEIEYSKLWKTFHKTISIKERENKKLQQSNLPKYYWKYLV EDM >gi|292606576|gb|ADGG01000034.1| GENE 54 53325 - 54335 1312 336 aa, chain + ## HITS:1 COG:FN0952 KEGG:ns NR:ns ## COG: FN0952 COG2073 # Protein_GI_number: 19704287 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Fusobacterium nucleatum # 1 322 1 322 337 526 93.0 1e-149 MKLAFWTVTKGAGNIAREYKEKLQEHLKEDSIDVFTLKKYDVENTIQIEDFTANINEKFS QYDGHIFIMASGIVIRKIASLIGTKDKDPAVLLIDEGKHFVISLLSGHLGGANELTHSLA NILKLVPVITTSSDVTGKIAVDTISQKLNAELEDLKSAKDVTSLIVNGQKVNILLPINVK VTNEISADGFILVSNKKNIEYTRIYPKNLILGIGCKKDTKAEDILRAIEDCLDKNNLDIK SVKKVATVDVKENEQGLIDAVKFLNLDLEIISRDEIKKVQDQFEGSDFVEKNIGVRAVSE PVALLSSSGNGKFLVMKEKYNGITISIYEEEIDKYE >gi|292606576|gb|ADGG01000034.1| GENE 55 54328 - 55077 1192 249 aa, chain + ## HITS:1 COG:FN0951 KEGG:ns NR:ns ## COG: FN0951 COG1010 # Protein_GI_number: 19704286 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Fusobacterium nucleatum # 1 249 1 249 249 467 94.0 1e-131 MSNGKIYVVGIGPGNMEDISIRAYNILKNINVIAGYTTYVDLVKDEFPDKEFLVSGMKRE IERCREVLEVAKTGKNVALISSGDAGIYGMAGIMLEVAMGSGIEVEVVPGITSTIAGAAL VGAPLMHDQAIISLSDLLTDWEVIKKRIDCASQGDFAISLYNPKSKGRTEQIVEAREIML KHKLPTTPVALLRHIGRKEENYTLTTLEDFLNFDIDMFTIVLVGNSNTYVQDGKMITPRG YEKKSNWGK >gi|292606576|gb|ADGG01000034.1| GENE 56 55208 - 55954 1003 248 aa, chain + ## HITS:1 COG:FN0950 KEGG:ns NR:ns ## COG: FN0950 COG2099 # Protein_GI_number: 19704285 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Fusobacterium nucleatum # 1 247 19 265 266 405 89.0 1e-113 MIWVIGGTKDSRDFLEKFVEYENDIIVSTATEYGAKLIENLPVKTSSEKMDKEAMLKFVE NNKITKVIDTSHPYAFEVSKNAMEVAEEKNIQYFRFEREKVDILPKKYKNFEEIKDLIEY VENLEGNILVTLGSNNVPLFKDLKNLSNIYFRILSRWDMVKRCEDNNILPKNIIAMQGPF TENMNIAMMEQFNIKYLITKKAGDTGGEREKVSACDKLDVEIIYLDKKEMSYRNCYTDID ILIKNLII >gi|292606576|gb|ADGG01000034.1| GENE 57 56016 - 60440 4817 1474 aa, chain + ## HITS:1 COG:FN0949 KEGG:ns NR:ns ## COG: FN0949 COG1112 # Protein_GI_number: 19704284 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Fusobacterium nucleatum # 51 1473 1 1424 1425 2078 80.0 0 MDKRGNIIALYQYIAEVVKSIKTEKKDVNNEEWCYFLEELPKYPGVTLNYLDNKNSSSNP KILQIEKLPFLNPLAIDKELLDWLSGDWGDYKSPVKLLSEKIIKEDTSTKVVNISKKDKE TLEKLLKDRKFWVEEQKKIEVVRKLFDTLYNKYLILDRDSDSLELLVANGLVKVPNEDIC YPILLKKVNFSVDTEKNLISITDGSDNDLITQELYLNFLAEVENINLDKVFYLEDKILEN NIHPISKNDTIKDFFREFIHNLNPRAQFTEDISTDNKENIITIEWKPILFIRKKDDGKVE TINNIIKDIENGGEIPEFLSELVGIIENDKKTIEQVPDILFTKETNNEQMEIIKSLYSHR AVVVQGPPGTGKTHTIANLLGHFLAEGKNVLITSQTKKALDVLKEKIPTDIQDLCISMLD DDSSDLGTSVESISEKLGYLNLENLKNECIEIENQRNELKEDIRNIKRKIFNIKYQESHP IIYNNESITLKEAGEFLRKNQRKLDRIPGIVSSGVPCPINNENLAFLKSGYKKAVSKEEE KEIELGLNKLSDFWTLEEFKEMFESKKEIISRLELLLKDRKYHMDDNLFYIEDKTIIDLE KLKNYSDVDKIIPKDLKTIEVWKRDVCIAGTENAGDRKIWLSFIKDIRRLYDLTNMTKDQ LFKKDVVYKDIDVTTAKKLITALKKGIEKPGFFFKHRLRKARREISDKVTINNRILETLY DCNVALEYTNLTELKENTKNTWDILMTGSTLKDKENNKNLYKQLYSYAEQMEYLLNWYDR EKKAFLHKIENAGFEKIDFNKTEGNPIHVDEINQILDFIPSLEELITIGKVALEYREIYK KRNEYLEKIENIVKDRSPLGREIKNAILNENMDKYSETLEKLKVLSEKEVLYKKYKTLLN DVKTVANSWGDELENSLFNDKIENIYNVWRYKQISQKLKELAEKPYVNLQTDILEKSEEL KKLTTELVTKKTWYNIINFIEEKDNLAISQALRGWKQTIQKIGKGTGKNTGIHKKHAKEK MLLCQKVVPAWIMPLNKVFDTLNPVENKFDIVIIDEASQSDISSLILLYMAKKVIIVGDD KQVSPSDVGVNIDKINMFRRKYIKGKVANDDLYGIRASLYSIVSTTFQPISLREHFRSVP EIIGYSDKTSYDNQILPLRDSNSSILKPAIVEYKVDGKRDEKNKINKIEAETIVSLIETC LAMKEYKNSSFGVISLLGDEQAELIQDLIVQRIPASEIEKHKILCGNSASFQGDERDVMF ISLVDNSEKHKSLRLVGEGVEGATRKRYNVAISRAKDQLWIVHSIDKNTLKDGDLRKELF DYIDSLKENTLENTILENAVPSDFENEVAKHLLEKNYTIKQKWRVGSYDIDIVAIYEDKK IAIECDGKTLNHTEEEVIASLEEQEILERCGWQFIRVRASEYFRNPEKAIKDLIIQLDDK GVYPNHKEVHIDKNELLNNIKSEALELMEKYEEE >gi|292606576|gb|ADGG01000034.1| GENE 58 60427 - 61545 1131 372 aa, chain + ## HITS:1 COG:FN0948 KEGG:ns NR:ns ## COG: FN0948 COG0053 # Protein_GI_number: 19704283 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Fusobacterium nucleatum # 1 372 1 372 372 493 79.0 1e-139 MKKNNEEKRETVIVKTSIIGIFVNILLVIFKATVGLLSNSIAIILDAVNNLSDALSSIVT IIATKIADSEPDKKHPLGHGRVEYLSAMIVAGIIFYAGITSLIESIKKIINPEKVEYSKI TLLVLLVSIILKLALGKYVKTKGKNFNSPSLIASGSDAMSDAILSLSVLLSAILYIFTNI NIEAYVGVLISIFIIKAGLEIFMDAVNEILGKRVNKDIKNKIKKTICEIENVHGAYDLVL HNYGPDKYIGSVHIEIPDSMTAEEIDPLERHITNVVLAKHNVYLSGITIYSMNTRNEEFK KIHSDILKTVMSNEGVLEFHGFYIEEKNKSIRFDIIIDYSKKNRNEIYEKIYNDVKNKYP DYIINIKVDIDI >gi|292606576|gb|ADGG01000034.1| GENE 59 61760 - 62959 1523 399 aa, chain + ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 1 398 1 398 399 607 85.0 1e-173 MFEYQLNMAETVGFAIILLLLGRWIKKKVNFFERFFIPAPVIGGTLFSIILLIGHQTESF TFTFNNDIKNLLMIAFFTTVGFSASLKILAKGGVGVALFLLAATILVILQDIVGPVLAKA LGIDPLLGLAAGSIPLTGGHGTSGAFGPYLEELGASGATVVAVASATYGLISGCLIGGPI ARRLMIKNNLKPTEGKAGFDSSLLNNESEMTEESLFSAVVYVGIAMGIGATINIILEKYG IKFPAYLMGMVVAAIMRNIIDASQKPLPFNEIGVIGNISLSLFLSMALMSMKLWELVELA GPLSIILIVQTIVMALFAYYVTFNIMGRDYDAAVIATGHCGFGLGATPNAIANMETFTAT NGPSVKAFFIIPIVGSLFIDFVNAMVIKGFASWIVANFR >gi|292606576|gb|ADGG01000034.1| GENE 60 63100 - 63894 974 264 aa, chain + ## HITS:1 COG:FN1161 KEGG:ns NR:ns ## COG: FN1161 COG0796 # Protein_GI_number: 19704496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Fusobacterium nucleatum # 1 264 1 264 264 447 84.0 1e-126 MADKRQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERI LDFFVKNNCKLVIVACNTASTAAIDYLRERFPLPILGIVEAGIKIARKNTKTKNIAVIST KFTAESHGYKNKAKMIDTELIVKEIACIEFPMMIETGWETFDNREELLNKYLAEIPKNVD TLVLGCTHYPLIRKDIENHTNLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGKKIFFVTG ETYHFKPTAEKFLGEEIEIYRIPK >gi|292606576|gb|ADGG01000034.1| GENE 61 64164 - 65171 1007 335 aa, chain + ## HITS:1 COG:FN0660 KEGG:ns NR:ns ## COG: FN0660 COG1135 # Protein_GI_number: 19703995 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 334 1 334 335 572 90.0 1e-163 MITLEKVNKVYSNGLHAVKDVSLKVNRGDIFGIIGLSGAGKSSLIRLINRLEEPTSGKIF INGENVLEFNKKQLLERRKKIGMIFQHFNLLSSRTVEENVAFALEIANWNKNEIKERVAM LLDIVGLSDKAKYYPSQLSGGQKQRVSIARALANNPDILLSDEATSALDPKTTKSILELI KEIQQKFSLTVVMITHQMEVVKEVCNRVAIMSDGRIVEEGGVHHIFADPKNEITKELISY VHQQTDTEIDYLHHRGKKIVKVKFLGTSTQEPIISKVIKEYGIDISVLGGTIDKLATMNI GHLYLELDGDLSAQDKAIELMKTMDVIVEVIYNGY >gi|292606576|gb|ADGG01000034.1| GENE 62 65161 - 65862 968 233 aa, chain + ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 1 233 1 233 233 331 91.0 7e-91 MDISSLIEPLFENFENPIISMLAVSTVETLYMVLLSTLFSLLLGFPIGILLVITKEGGIY EMKKFNAILGVIINALRSFPFIILMIILFPLSRFVVGTTIGATAAVVPLSIGAAPFVARI VEGALLEVDPGLVEASQSMGASNSKIIFKVMLPECYPTLVHGIVVTIISLIGYSAMAGTI GAGGLGDLAIRFGYLRFKLDIMIYAIIIIIILVQIIQSVGNYIVNRRLKKIGK >gi|292606576|gb|ADGG01000034.1| GENE 63 65878 - 66663 1094 261 aa, chain + ## HITS:1 COG:FN0658 KEGG:ns NR:ns ## COG: FN0658 COG1464 # Protein_GI_number: 19703993 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Fusobacterium nucleatum # 1 261 1 261 261 453 93.0 1e-127 MKFTKLIGNVGAFLLLSVGALAGTIKVGATPVPHAEILELIKPDLKKQGVELKIVEFTDY VTPNLALADKEIDANFFQHKPYLDKFVEERKLNLVSIGNVHVEPLGLYSKKIKSINDLKK GDTIAIPNDPSNGGRALILLHNKGVITLKDPKNLFATEFDIVKNPKKIKFKPTEVAQLPR ILPDVTAAVINGNYALQANLSPAKDSIILEGKESPYANILVVRKGDEKKEDIQKLLKALR SQKVKDYINKKYSDGSVVPAF >gi|292606576|gb|ADGG01000034.1| GENE 64 66926 - 67474 782 182 aa, chain - ## HITS:1 COG:FN1085 KEGG:ns NR:ns ## COG: FN1085 COG0693 # Protein_GI_number: 19704420 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Fusobacterium nucleatum # 1 182 1 182 182 299 80.0 2e-81 MKTYIFLANGFEILETFSPVDVLKRCGAEVITVSTEKDLFVSSSQNNIVKADIMLNEIYY KDADLVVIPGGYPGYINLRENKDVVDIVKYFLENDKYVASICGGPTIFSHNKIANGAKIT AHSSVRKEIEENHIYVDAPTHVDGKIITGVGAGLALNFAFKIAEQFFEKEKIEEVKRGME LI >gi|292606576|gb|ADGG01000034.1| GENE 65 67490 - 68395 1044 301 aa, chain - ## HITS:1 COG:FN1038 KEGG:ns NR:ns ## COG: FN1038 COG0697 # Protein_GI_number: 19704373 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 301 2 302 303 465 85.0 1e-131 MNKKSYFGDLMLFLAAFIWGTAFVAQVTGMDKIGPFTFNMARSIVAVICLGGYLIFTKAK IPENKSFLLKGGLICGFFIFTGTSLQQIGLQYTTAGKTGFITSFYILILPFITMIFLKHK IDLLTWISIIIGFIGLYLLAIPNLSDFSMNKGDFIVFLGSFCWAGHILVIDYYSKKVNPV ELSFLQFVVLSILSGICALIFESETATLNNIFLSWKSVMYAGFFSSGVAYTLQMVGQKYT KPVVASLILSLEAVFAALAGYLILDEVMTSREFIGCFIVFLAMIFSQIPKDLFKKKYIGL K >gi|292606576|gb|ADGG01000034.1| GENE 66 68682 - 70256 1886 524 aa, chain + ## HITS:1 COG:CAC0094 KEGG:ns NR:ns ## COG: CAC0094 COG0155 # Protein_GI_number: 15893390 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Clostridium acetobutylicum # 10 512 9 504 516 250 33.0 5e-66 MEKLEGLENIDKVEEFIKLTKAALKDEEKYKLWNASKSMYGIYAERDKGTYMVRPRFIES KISLDNLIFFLDIAKRYGDKRLHLTTRQDIQLHGNKKEDLVDLLKELKSKGFLTKATGGD AARAVIAPPTTGFEEEIINVAPYSKAVTRLILETADFMFLPRKFKVAFSNKEENNLYVKI ADVGFEAIEKDGVKGFKVFGGGSLGINPREAIVLKDFIKPEEALYYVVAMRNLFNEHGDR KIRGKARLRFILIRLGEEEFLKLFNNYLDDLYKKVGDKYKNILLEEIEKYKNPYEVKAIK EKEKFVKKFNIVKGKIEGRYGYYIRFVKGDISLKEGEKLVEFLKNLNYKVEIRLTSHQEL FIANLKRADVYALENLSSKYSKKRFFSSLSCIGNTICNPGILDTPPILEMILNYFKNKQR LASYLPKIQLSGCPNSCAAHQIAELGFQGKRKKDGAYFNVFVGGRFKTDDTITLSSSVGE LKAETIPLFLEEMAKILKERKITYEDYSKQNEFIELVKKFEGVI >gi|292606576|gb|ADGG01000034.1| GENE 67 70257 - 72056 2554 599 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0484 NR:ns ## KEGG: Sterm_0484 # Name: not_defined # Def: thioredoxin domain protein # Organism: S.termitidis # Pathway: not_defined # 1 593 1 595 600 737 58.0 0 MGLPSIYPTGVTIYNPEKCWNGYNLVQTIESGALLFDMNGNEVRRWDQFHGFPNKLLPNG NLIGHSGDRNPKYGMQDGLDLVQIDYDGNIVWKFEKFEFVEDEGEEPRWMARTHHDYQRE GNPVGYYVPGQIPEVNKGNTLILAHQTLYNKKISDKKLLDDVFYEVDWEGNILWQWNANE HFEEIGFSEDAKKTLYENPNVRAADGGVGDWLHINCMSYLGPNKHYDNGDERFHPENIIF DSREANFIAIISKKTGKIVWKIGPNWNDDDVKHIDFIIGPHHAHLIPQGLPGAGNILVFD NGGWGGYGLPNPSSKNGLKNALRDYSRVLEIDPITLEIVWEFTPESIKAAIPTDAAKFYS PYVSSAQRLPNGNTLIDEGSDGRVFEVTVEKEVVWEWISPYFTDDGKTTNNMIYRAYRYP YEWVPQEEKPIEKEIKPLDIKIYRLENAGKFGAKTVVKVEGTIPYSVSDALCVAKIDESK KLNTEKLFTVNRNLFEEIVEDNKKVERLELILFGAERCRHCKALHPIIEKVLENDLAKSI KAKYVDVDKNPEITEKYKVQGIPVIIITDGEKELSRKAGEKTYSELYSWLEELISKNIK >gi|292606576|gb|ADGG01000034.1| GENE 68 72068 - 72820 820 250 aa, chain + ## HITS:1 COG:AGpT116 KEGG:ns NR:ns ## COG: AGpT116 COG0600 # Protein_GI_number: 16119871 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 248 75 307 313 168 40.0 9e-42 MKNKSEYIKFILPLLIIFFWFIFTYTGKVPPTSLPSLSAVKDTFIEMLKSGQLSNDLSLS LRRVLAGFFISSVLGISLGIFMGISSKAKEFFQLTLTAIRQIPMIAWIPLIILWAGIGEV SKIVVILFAATFPIVVNTMGGVDSTSETYLEVAKMYGLSKKDTFFKVYLPSALPNIFTGL RLGLGASWMAVVASELIASSSGIGYRLNDARSLMRSDVVIVCMIIIGLVGLLMDKLIVLI SHELTPWKKN >gi|292606576|gb|ADGG01000034.1| GENE 69 72833 - 73609 1051 258 aa, chain + ## HITS:1 COG:MJ0412 KEGG:ns NR:ns ## COG: MJ0412 COG1116 # Protein_GI_number: 15668588 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Methanococcus jannaschii # 6 243 17 256 267 224 48.0 9e-59 MSENIIKIKNISKKFQKNNEEVQILNDVNLDIKKGEFITIVGKSGCGKSTLLKLISGMVP ITEGEILINDKSVNGVSKDCSMIFQDARLFPWLKIKDNVAIGLKNISPEEKNRIVLEYLE LVGLKGVENSYPDHLSGGMAQRASIARGLALNSQIMLFDEPFSALDAMTKVQLQEELLKI HQEKGKTVILVTHDIEEAVYLGDRVVVMAANPGVIKDIINIDIEGRKDRTNTEFLSYKNK IYDYFFEDRNKNAVEYNI >gi|292606576|gb|ADGG01000034.1| GENE 70 73624 - 74661 1319 345 aa, chain + ## HITS:1 COG:BS_ssuA KEGG:ns NR:ns ## COG: BS_ssuA COG0715 # Protein_GI_number: 16077949 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Bacillus subtilis # 42 340 30 321 332 88 25.0 2e-17 MEGKSRKIKILIGLIALIVLAFGSFKPKDKNNENVNTAEVNLKKVIIGLPGISNQTLEAT GIAVNKGYIAEELKKVGYEPEFIYFQQAGPAVNEALATNKIDVAMYGDFPITVLKSNGGD VKVFAVDNSRFMYGVLVQNDDNIKSIKDLEGKKVLYRKGTVEQKFFKEILKKYNLDEDKF VSVNAGGADGQSIFSAKEAEAIFTFYYTALYMESKGLGKVIDSTLDKPEVGTQSLAVGRT KFLEENPDAAVAIIKALERAKDFAKENPEEVFNIYAQSGIPAEVYKKAYSADLTFSNFDP AITDDTKEKMQKLIDFLYDNQIVKNKITVDDIITTEYYDKYKSSK >gi|292606576|gb|ADGG01000034.1| GENE 71 74791 - 76611 2264 606 aa, chain - ## HITS:1 COG:FN1434 KEGG:ns NR:ns ## COG: FN1434 COG0457 # Protein_GI_number: 19704766 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 35 606 61 657 657 424 46.0 1e-118 MEEDTLLEKIEDLYILDKHQEIIDMIEALPTEKLNNGLIGKLARAYNNVQNYEKAIEVLK SIEKEEKNTMLWNYRMGCSYCYLDDYEKAEKYFLKAHELEPEDEDIKSFLFYIYMKILKQ INFNKDDLDNQKKALNYALKAKECATTNDDKIECYSYLGWLYNKFTEYQKAEDSLKKAIS LGRDDLLIHSELAYCLGELNKIEEALKHYFKIIELEPDNIWALSQIASYYTLLGEYKKAL KYFLKIQKFEINDDKLNIKIGNCYEEIENYAKALEYYLLAYKESEENIWLASKIGRCYVK IENYTKALEYYLLAYKEGEENIWLVSEIGWIYKNFEKYEEALKFLLRSIELGRDDTWVYA ITGLCYKELGKYEEALEKLKKALEILNEDDPDDNINKKIFLNSQIALIYRKIEGSNPDKA LHYLYAAKELGRDDEWINAEIGWELGYNSVDREEEAIKYLERAIELDEDDESNWAMAADI YFDLKRYEEALEAYNRAYELEPLDKEGDASLYIYKIRITLRRLERYDKAIEKLLESRRLA LEEGKKPVLEELELAYCYAALGNKTKAEEHLQLSINSLGVHAKNERYFKKQFDEIREMIN ILSHLS >gi|292606576|gb|ADGG01000034.1| GENE 72 76809 - 78548 193 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 340 567 131 357 398 79 27 1e-13 MKILRTYIKENIGILSLGAIFLTLNTFATLAIPFQISNIINLGIMKKDIDMVYSTSIKMV IILIVGTATGIIANHFVALFATNFTKKNRKLLIRNLESLTVDQVNDFGVASLVTRMGNDN NNAQRLIVAFFQMILPSPIMAVISIFMTIKLSPTLALIPLFTILVFAFAIVLTLFKSLPY ILKVQKKLDRMTLVLRERFIGAKIIRAFDNSKKERDKFNDVAQEYTDNYIITNKKFALLS PMAFSLMSIVITLIIFFGAMKVLNNTLEIGSITAIVEYSLTTIAALIMSSMVLVQMPKAV VSIERIEEVLNVTSEIKDKEELKDNSYYEDILKQNPISLTFDNVCFRYKGAEKQILKNIS FSVKAGERFAIVGATGSGKSTIAKVLLRLNDIESGKILINGVNALDLPLNCLRNQISYTP QKAYIFSGKIKDNFRFTNKDMTDKEMIKIAKIAQSYDFIDSLPDKFDSFVAQGGINFSGG QKQRLSIARALSKDANIYLFDDSFSALDYATDAKLRKELKTFLKDKITIIIAQRLNTIAD ADKIIVLKDSEITGIGTHQELLESNQEYIELAKSQGILE >gi|292606576|gb|ADGG01000034.1| GENE 73 78560 - 80359 2330 599 aa, chain + ## HITS:1 COG:CAC3281 KEGG:ns NR:ns ## COG: CAC3281 COG1132 # Protein_GI_number: 15896526 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 71 599 169 699 706 442 45.0 1e-124 MSKKKNQNEDSIKNFKKAVSNFLSLLGERKVPFLISVVANIISTVLVVAIPWISAIAIDD IVKILNDNTIIDKWSAVFGFLIKPVSLLGIIAVLIFALSYLQEYISAILGEEVAQSLRVK LSRKFTKLPMNFFDTNQVGDILSKLTTDIEKVAEVIGSSFTRFVYSFLIMILVIIMLFTI NAKLTLLVLAILLVSIVVTYYVSKLTQKIFSQDVKSLSELSSLTEEALTGNLVVQAFNKQ EDIITSIDQSIEKQYVAAKTLEFTIFSIYPSIRFITQIAFVTSAVMSAILVINGHLTLGL AQAFLQYITQISEPVTTSAYIINSLQNALVSVERVYDILELPEENELTEDTHLLDNTKGQ IVFENVSFGYSKDKLLMKNVNFTAKAEQMVAIVGPTGAGKTTLINLLMRFYDVNGGRILF DGVDISKVTRKELRANFGMVLQDTWLFKGTIAENIAYGKPDATREEIIEAAKLAKCDSFI RKLPQGYDTIITSENGMVSQGEQQLLTIARTILPNPKVMILDEATSSIDTKTEKDIQAVI SQLMKGRTSFVIAHRLSTIRNADLILVMKDGDIVEQGNHDELMTVNGIYANLYNTQFSS >gi|292606576|gb|ADGG01000034.1| GENE 74 80516 - 81424 1120 302 aa, chain + ## HITS:1 COG:SP1767 KEGG:ns NR:ns ## COG: SP1767 COG1442 # Protein_GI_number: 15901598 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 32 299 550 812 814 126 31.0 4e-29 MGLKILKNFKKNIYWRINRYSLSKSQNIRYIIKSRIETMDKLLDGYSISRYGDGELSLIY KKKKNGINYQEDNIEMRKRLAEILKSDLDNHIVGIPGPLVKIDDLILGEAYFWSKYYYTN KKNLNKYLSKTKVYYDQMISRFYLPYTDKNDCELIVEKLKQLFKDRDVLIVEGENTRFGL GNELLSLAKKVKRILCPPKNAYKIYNKILERIKLENKEQLILLALGPTATILAYDLAKEE YQAVDIGHMDIEYEWYLRKADRKIDIENKAVNEVSGVVNKEIKDKELKAVYETQIIDRIS LD >gi|292606576|gb|ADGG01000034.1| GENE 75 81434 - 82528 1144 364 aa, chain + ## HITS:1 COG:FN1247 KEGG:ns NR:ns ## COG: FN1247 COG0859 # Protein_GI_number: 19704582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 364 4 374 379 341 54.0 1e-93 MIRKLNRIFQDYMREKRLKIGKAIWDKKEKTNIIKGNNFIEDNNIKSILFLRYDGKIGDM IVNSLMFREIKKIYPNIKIGLVARGAAIDIVRDNPYVDEIYEYNKDRKKIKNLALKIKEE KYDLLIDFSEMLRVNQMMLINLCGARINIGIEKENWKLFDISLNIRDFNQHISELYIKIL KFLGIDNINSSYDVFSSNYLLKDLNLEKKKYCVFNPYAASKHRSFSSENIEKISKIILEK NYENLILIGSEDKIKELKRLDISKENKVKIVETKGMAEVAELIKGADLIVSPDTSIVHLG KAFDKKMICIYRKELGKEDKNSVLWGPNSEKAKIIFVEEKIKDGEEININQLNLDEFKKE MERI >gi|292606576|gb|ADGG01000034.1| GENE 76 82525 - 83382 789 285 aa, chain + ## HITS:1 COG:FN1243 KEGG:ns NR:ns ## COG: FN1243 COG0463 # Protein_GI_number: 19704578 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 2 271 4 272 286 186 41.0 5e-47 MKISVIVPVYNRLEHLRALFLCLLRQKKQADELIITDDGSSQKVLDFIGDLIPKAQFKVK HIYQEDKGFRKTRALNNAVRNSTGDLLIFCDQDLIFGEEYIETIVNNIKSNIFLMGRAHH TTEEQKNLILSDIENINSYNEIIKKLPAKYIETIDKMLKEDRKRRIIKTFKLAKRGIRLV GMSYALMKEAYLKVNGYDENYIGWGQEDDDFGNRLTVAGINGRELITKNIQLHLWHYSDP TKVHSSNEEYYYKRKKEIFSKKDFFCKKGYEDSKIRDDVTIKTLN >gi|292606576|gb|ADGG01000034.1| GENE 77 83394 - 84110 713 238 aa, chain + ## HITS:1 COG:no KEGG:FN1240 NR:ns ## KEGG: FN1240 # Name: not_defined # Def: lipopolysaccharide core biosynthesis protein RfaY # Organism: F.nucleatum # Pathway: Lipopolysaccharide biosynthesis [PATH:fnu00540]; Metabolic pathways [PATH:fnu01100] # 5 238 7 240 240 215 56.0 1e-54 MLLEEKYKGFFIFAYDKFYINIGKNIIDKEYKELNILKNTKRNYVSEIEINNTSYIFKEP RNEYIIPQRKFFTLLKKGEALTTLINVNEAIISDNLIEYAKPLLAIVKRKHGMICYSTLV QEKININDSRELNKMVEVTKKIHSKGYYHGDCNPSNFITSKDKVKILDTQAKKMTFGNYR AHYDMLTMKLDSYQEMEYPYKKNIFYYLAIFIKKIKKLKFIEKIKEKKKKLREKGWKI >gi|292606576|gb|ADGG01000034.1| GENE 78 84461 - 84778 400 105 aa, chain + ## HITS:1 COG:BS_yyaI KEGG:ns NR:ns ## COG: BS_yyaI COG0110 # Protein_GI_number: 16081137 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Bacillus subtilis # 28 83 128 183 184 72 57.0 2e-13 MLSYDIEIRNTDSHKIYDKSTNKRINEGNSVKIGNHVWLGMRAVILKGVNIDDNSIVAGG SIVTKDVMSNTIVSGNPAKQIKENVYWTREEVMQYKIEEDASLNA >gi|292606576|gb|ADGG01000034.1| GENE 79 84771 - 85529 846 252 aa, chain + ## HITS:1 COG:VC0238 KEGG:ns NR:ns ## COG: VC0238 COG0110 # Protein_GI_number: 15640268 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Vibrio cholerae # 87 252 21 186 188 104 39.0 1e-22 MLKFCLHLLLGFNLIKNKYKKIKNKIKILAKLNKTKMIILGDDNIFSANKDSFFKKTSFF IKNNNNMLFFKKKSILKNCQIIVEGFNNVLYIDKCTLLRDSYIKIEGNNNKIFIGSNCCL KNLTIDMKNDNSVIKIGDKTSIEEARITSFEPYKIEIGKDCMFSANIVIMNTDVHKIYDI DTGLKTNEGKEISIGNHVWLGIRTIILKGVSIGDNAIVAAGSIVTKDVKANTIVSGNPAK QIKENKNWSRDL >gi|292606576|gb|ADGG01000034.1| GENE 80 85554 - 86744 1216 396 aa, chain + ## HITS:1 COG:CAC2313 KEGG:ns NR:ns ## COG: CAC2313 COG0438 # Protein_GI_number: 15895580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 80 395 68 375 377 122 32.0 1e-27 MKKTFLHISEEFEYTWLGKDNGMIPIYMSEKLGYDSKILTVNLKNDLPDSERGVEFVKVK RKFPFLSNFAYWTKLVKRYNIFKYLIKNAKDIDVLMLFHVSRCSYWYAHFYKKLNPNGFI YVKADFNLAVYQKEWNIVNSKPKSLREFFRKRRESAEYNKRKKLVPMTDLISYESLEAYE FMKDSYAGIDTKDKTLYLPNGYDNEIIDKIKVKTLEEKENIILTVGRLGTEAKNTELLLE TLKEIDLKDWKVYLVGSIDKRFINYKENFFKENPYLVDKIIFTGEIKDREELYKYYNRAK VFVLPSRWESFGIVMVEAMAFGNYVITSNTCAAKDITNNNEVGKIVEIDSKKELKDEIIK TISGEIDLKEKYEKTLNHVSNFKYSYLIKKLGERIH >gi|292606576|gb|ADGG01000034.1| GENE 81 86746 - 87816 939 356 aa, chain + ## HITS:1 COG:FN1245 KEGG:ns NR:ns ## COG: FN1245 COG0438 # Protein_GI_number: 19704580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Fusobacterium nucleatum # 1 356 1 380 381 121 30.0 2e-27 MLKIGFCIDSLETGGAEKLLVDIVNALYETKDYEIHILTKLKSNSYFFNLIKGKIKYHFL LEKKSGGFFSKIKDSILKKINFRNFSLNVDVIIDFLDGDFCSYIRDIKNKKKIVWLHSSY KNLLIRKKNIDEKLKNYDKILVIADDMEKELLEMRKDLKNIYKIDNFVDYQEIDKKLNED LKIDFDFNQKYFLTVCRLNEEQKDVKTLIEAFSLYKGDEKLVIAGDGPDRKMLEDLCIEK KIKDKVIFLGMINNPFIFMKNSQAFILSSKVEGFGLVLIEALYCGTKVISSDCPTGPSQI LLNGEAGELFEVSNVDQLLNKLEIIHNKEYNKAKIEETLKRYTRENFINNFRKVIE >gi|292606576|gb|ADGG01000034.1| GENE 82 87813 - 89003 748 396 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3102 NR:ns ## KEGG: Sterm_3102 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 17 387 18 414 425 81 24.0 5e-14 MIKEKNNFWSQLIAFSILVYLLFLSRRGGNSKDIVSILIMLFTLVYSYKEGIKRYLSYKK EIVTGILYIALVTISYLILDDKGNDRFYTFTHATFFSIGFMLILLNYKLDNKYTKYILPL LIAISLPSMYKGVLDFYKNYAVISQYRIEGTSYTTKYAAEVGIYLLLAIFSFAYYKKIYI RLLLLPYILTNLGLILSTQSRNTFIAIPLTIIFLYTVVDWKKGIIILLILLGGLGILLKS NYNVSNINRIKSSISTVEKIKVDARYIIFLDGIEKAKNHIFIGDGFYKYKGGKLITPIEA VDHYHNIFIETAVTQGVFTLVVYIVFIITLFIRMLKNYFKENDRLKRYIKLYATAVLVFS VLYGLFEPIFYFEKIYQLIFTIIALSFIIDDTSTKE >gi|292606576|gb|ADGG01000034.1| GENE 83 89054 - 89881 949 275 aa, chain - ## HITS:1 COG:FN0395 KEGG:ns NR:ns ## COG: FN0395 COG0697 # Protein_GI_number: 19703737 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 274 13 286 286 406 89.0 1e-113 MLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSLMLSAFILFRQKESIKVEKANIPFVF GRSFFGFIGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKERVDKKQVIGIILML LAVVFVIKPSFSPEVIPSLAGLFSAVLAGFSYTIIRYLNGKVKSEINVFYFSLLSVICTF PLMMMNFVKPTLNEFLILLGGIGISAAMGQFGLTYAYTFAPASEVSIYNYVIIITSMFMD YVLFSTIPDLFSFIGGFIIMTTAIYLYIHNKKKDN >gi|292606576|gb|ADGG01000034.1| GENE 84 89920 - 90903 1447 327 aa, chain - ## HITS:1 COG:no KEGG:Sterm_1566 NR:ns ## KEGG: Sterm_1566 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 325 1 324 324 319 50.0 7e-86 MEKDELIGKLSNFIRKEKFQEIKEIIKKFKDEKKYDMVCFSSQAFINMDEYKEALEILDS IKNEYSENGEFCIRYAMALYNSNREDEALEWFKKAKEKGIKEIDETSSRYYPKSIDEWIK RAELWAPRRIEKNKFEKELREKRNKKPMLNVSFDEEVLKGLWYYDEFSLKEYLAKPVTDE DFEKVERELGYRLPDSYKALMRIQNGGELRKNNFEGPFKRNWTSGSFDAEYISGIDSSKR YSLCGEFGSKFWIEEWKYPNIGIAICGTSSGGHDMIFLDYSDCGPEGEPCVVHIDQEGGY EITYLADNFKDFVDGLFTSLDDEYEDD >gi|292606576|gb|ADGG01000034.1| GENE 85 90975 - 91391 624 138 aa, chain - ## HITS:1 COG:no KEGG:Sterm_1566 NR:ns ## KEGG: Sterm_1566 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 138 1 139 324 90 33.0 2e-17 MDKKELVNKISYLISKKNHDQAYAIIREFEKKNNFEMICVSAQGFINAYNYRDALKILES IKKEYSKNAEFCARYAIALFKSEKEDRSLQWFEKAKEKGLEDLSEISNDFFSKSIDDWIK KAKFWGPIRVEENSYKED >gi|292606576|gb|ADGG01000034.1| GENE 86 91407 - 92147 921 246 aa, chain - ## HITS:1 COG:FN0394 KEGG:ns NR:ns ## COG: FN0394 COG3713 # Protein_GI_number: 19703736 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Fusobacterium nucleatum # 1 246 1 246 246 340 72.0 1e-93 MKKYLLTMLALFSVVAVANDDFKASVTAAYGTRTSIYKGREENAIPIFPNLSYQNLYLKG TEVGFKFLDYSRFNSTLYVDLLDGHSIKGSRMDTGYESINRRRYQQAIGLKADMKLNEIS ENLTLSPSFSIGNRGSKTGLSLSYLYMPKENIIISPSVNVKYLSKKYTDYYFGVDRDELG GSITNEYTPDGAFEFGAGLYGEYYFTKNISALAYVNMKQYSSEVTKSPITEDRIITNVGA GLKYTF >gi|292606576|gb|ADGG01000034.1| GENE 87 92144 - 93943 2130 599 aa, chain - ## HITS:1 COG:FN0393_1 KEGG:ns NR:ns ## COG: FN0393_1 COG0438 # Protein_GI_number: 19703735 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Fusobacterium nucleatum # 1 350 1 350 350 597 90.0 1e-170 MNILMALSQLEITGAEVYATTIADELIERGNKVYIVSDTLTTPTKAEYIKLEFNKRSLIK RIEHIKFLYKLIKEKDIQIVHAHSRASSWSCQVACKLAGIPLITTTHGRQPIHFSRKLIK AFGDYSIAVCENIKKHMVNDIGFSENKTSVILNPVNYKELNLEKKLNDKKIISIIGRLSG PKGDVAYDILSILSDDELLKKYKVRLIGGKELPERFVKFKEKDIEFIGYVPNIQEKIFES DIVIGAGRVAFEALLNKSSLIAVGETEYMGFINKESLDKSLASNFGDIGSMKYPKIEKDI LLNDIKKALELSETEKEELKNIIFNETNLHNIVDRIEKKYFKLYVDKTKYEVPVIMYHRV INNSEDEGVHGTYIYENIFREHMQYLKDKNYTVITFRDLDKISWRNRFEKDKKYIILTFD DGYKDNYDLAFPILKEFGFKATIFLMGSSRYNEWDVKASGEKEFPLMSVDMIKEMQDYGI EFGAHTFNHPKINTLSNDEIEHQIIDVKKPLEEKIGREIITFAYPYGILNDYAKEMAEKA GYIFALATDSGSVCLSDDLYQIRRIAIFPNTNLFSFKRKVAGNYNFIKIKREEKNRSKK >gi|292606576|gb|ADGG01000034.1| GENE 88 93954 - 94847 1115 297 aa, chain - ## HITS:1 COG:FN0392 KEGG:ns NR:ns ## COG: FN0392 COG1032 # Protein_GI_number: 19703734 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 1 297 1 297 297 539 94.0 1e-153 MYDLYDFPLYRPPSEAYSLIIQITLGCSHNRCTFCSMYKDKKFVIKPIEDIKSDIDAFRA LYKNRAVEKIFLADGDALVVPTDILVQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLK KLYEKGLTLVYLGVESGDDEALKFIKKGIKAEKVVELSKKIMSAGIDLSITLIAGLLGKY QDNKMHAINTAKIITDISPKYASILNLRLYEGTELYDLMQQGKYDYMEGIEVLKEMKLIL SSMDASKITSPIIFRANHASNYLNLKGNLPEDIPRMIKEIDYAIENEAINVNNYRFL >gi|292606576|gb|ADGG01000034.1| GENE 89 94871 - 95674 1061 267 aa, chain - ## HITS:1 COG:FN0391 KEGG:ns NR:ns ## COG: FN0391 COG0561 # Protein_GI_number: 19703733 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 265 1 265 267 436 84.0 1e-122 MKYKLIVCDMDGTLLTSSHKISDHTANIIKKIEDSGVKFMIATGRPYLDARHYRDSLELR SYLITSNGARAHDEDNNPIVVENIPKELVKRLLNYKVGKDIHRNIYLNDDWIIEYEIDGL VEFHKESGYGFNIDDLSKYQNQEVAKVFFLGENKEIEDLEKKMKKDFKDELSITVSSPFC LEFMKKGVNKAETLKKVLKILDIKPEEVIAFGDSMNDYEMLSLVGKPFIMGNANKRLIEA LPNVEVIGNNNEDGIGEKLQEIFNVEI >gi|292606576|gb|ADGG01000034.1| GENE 90 95842 - 96129 496 95 aa, chain - ## HITS:1 COG:no KEGG:FN0514 NR:ns ## KEGG: FN0514 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 14 90 1 76 133 108 74.0 7e-23 MKEFQTEQKSNFFMGLICVIGGALVTCALYFGVARLGIFSSWASAVGVTISILGYNHFVK GASRSLGLVLGVILNAIGIIYGEFLDLCAIEDDAE >gi|292606576|gb|ADGG01000034.1| GENE 91 96221 - 97234 1526 337 aa, chain - ## HITS:1 COG:FN0436 KEGG:ns NR:ns ## COG: FN0436 COG1984 # Protein_GI_number: 19703774 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Fusobacterium nucleatum # 1 336 1 336 336 600 89.0 1e-171 MPSIKVHKPGLCTTVQDIGRIGYQQFGIPVSGVMDEFAFTVANYLVESDKNNAVLEIPFL GPTLEFDFDVTIAITGGEIQAKINNQDVKMWESINVKKGDNLSFGSLKSGMRAYLAFSAE IDVPVVMGSKSTLLKSKLGGFEGRQLKMGDIINFKNVKVLSKKNTLDKKYIPIYSHNQNI RIVLGPQDNYFEESSIKTMLENKYQVTKDTDRMGMRLAGEVIKHKDKADIISDAAVFGSI QVPGNGQPIILLADRQTTGGYTKIATVIKADLPKLAQMIPNDTIEFSLVNIEEAQKEYRE FYRILDEIKESFVVKPRIYTEKQLYVSKKLFGNRRKK >gi|292606576|gb|ADGG01000034.1| GENE 92 97227 - 97976 962 249 aa, chain - ## HITS:1 COG:FN0437 KEGG:ns NR:ns ## COG: FN0437 COG2049 # Protein_GI_number: 19703775 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Fusobacterium nucleatum # 1 249 14 262 262 446 92.0 1e-125 MENSVKFLFSGDSALVIEFGNEISVDINKKIRKMMDDIKKENIDGIDELVPTYCSLLINY DVLKIDYNTLVEKLKTFLNNDLETAEGEEVTLVEIPTLYNDEVGPDLSYVAEHNKLSKEE VIKIHTGTDYLVYMLGFMPGFTYLGGMSEKIATPRLESPRLQIYPGSVGIAGKQTGMYPS MSPGGWRIIGRTPLKLYNPDSDTPVYISSGDYVRYVSISEEEYNDILKKVENNEYKLNIR KIKRGELNA >gi|292606576|gb|ADGG01000034.1| GENE 93 97990 - 99177 1668 395 aa, chain - ## HITS:1 COG:FN0438 KEGG:ns NR:ns ## COG: FN0438 COG1914 # Protein_GI_number: 19703776 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Fusobacterium nucleatum # 1 395 1 395 395 590 95.0 1e-168 MEKKNNLSVLLGAAFLMATSAIGPGFMTQTAVFTKDMGATFAFVILVSVIMSFVAQLNVW RVLAVSKMRGQDIANSVLPGLGYFITFLVCLGGLAFNIGNVGGAALGFQVLFDLDLKIAA LVSGALGVIIFSFKSASKLMDKLTQVLGAMMILLIGYVAFSTNPPVGSAVKETFVPSSIN LMAIITLIGGTVGGYIMFSGGHRLIDAGIVGEENLPQVNKSAILGMSVATIVRIFLFLAV LGVVSLGNQLDAGNPAADAFKIAAGTVGYKIFGLVFLAAALTSIVGAAYTSVSFLKTLFK VVKDNENFFIIGFIVVSTLILIFLGKPVKLLVLAGSLNGLILPITLAITLIASKKEGIVG KYKHSNILFYLGWVVVLVTAYIGVKSLAKLAELFA >gi|292606576|gb|ADGG01000034.1| GENE 94 99195 - 99965 1190 256 aa, chain - ## HITS:1 COG:FN0439 KEGG:ns NR:ns ## COG: FN0439 COG1540 # Protein_GI_number: 19703777 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Fusobacterium nucleatum # 1 256 1 256 257 472 91.0 1e-133 MKFYVDLNSDIGEGYGAYKLGMDEEIMKCVTSVNCACAWHAGDPLIMDKTIKIAKENNVA VGAHPGFPDLLGFGRRKMVISPEEARAYMLYQLGALDAFAKANGVKLQHMKLHGAFYNMA AVEKNLADAVLDGIEEFNKDIIVMTLSGSYMAKEAKRRGLKVAEEVFADRGYNADGTLVN RTLPGAFVKDPDEAIARVIKMVKTKKVTAVNGEEIDIAADSICVHGDNPKAIEFVERIRK ALIENGIEVKSLHEFI >gi|292606576|gb|ADGG01000034.1| GENE 95 100369 - 100884 756 171 aa, chain - ## HITS:1 COG:FN1254 KEGG:ns NR:ns ## COG: FN1254 COG0778 # Protein_GI_number: 19704589 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 171 1 171 171 267 70.0 8e-72 MELLKLMSDRYTCRRYSEENIKEEDLNQILEAGRVAPTSHNNQPQRIYVVKSEEAKEKLM KDFAYNYKAPCYLVCGYNVDEVWRNDLDGDRESGDIDVSIVITHMMLMAEELGLGACWIG RITPELVKKNLDIPENVKVVAVLSLGYHREDDRPSKLHTIRRSNEELVKFL >gi|292606576|gb|ADGG01000034.1| GENE 96 100947 - 101741 1081 264 aa, chain - ## HITS:1 COG:FN1255 KEGG:ns NR:ns ## COG: FN1255 COG0647 # Protein_GI_number: 19704590 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 264 12 275 275 455 89.0 1e-128 MKDLKDIKCYLLDMDGTIYLGNELIDGAKEFLEKLKEKNIRYIFLTNNSSKNKDKYVEKL NNLGIEAHREDVFSSGEATTIYLSKKKKGAKVFLLGTKDLEDEFEKAGFELVRERNKNID FVVLGFDTTLTYEKLWIACEYIANGVEYISTHPDFNCPLENGKFMPDAGAMMAFIKASTG KEPTVIGKPNRHIIDAIIEKYDLKKSELAMVGDRLYTDIRTGIDNGLTSILVMSGETDKK MLEETIFVPDFVFESVKEIKETIE >gi|292606576|gb|ADGG01000034.1| GENE 97 101988 - 103277 662 429 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149195935|ref|ZP_01872991.1| Ribosomal protein L16 [Lentisphaera araneosa HTCC2155] # 1 426 2 427 432 259 34 4e-68 MEALYPVIVLFVLFFLNIPIAFALMGSALFYFIFLNTTMSMDMVIQQFVTSVESFPYLAV PFFIMVGSVMNYSGISEELMNMAEVLAGHMKGGLAQVNCLLSAMMGGISGSANADAAMES KILVPEMIKKGFSKEFSAAVTAASSAVSPVIPPGTNLILYALIANVPVGDMFLAGYTPGI LMTLSMMITVYIISKKRGYNPLRERMARPSEILRQAIKSIWALAIPFGIIMGMRIGIFTP TEAGGVAVFFCFLVGFFVYKKLKLHHIPIILMETVKSTGAVMIIIASAKVFGYYMTLERI PQFITNSLMDFTDNKFVLLMVINLLLLFVGMFIEGGAALVILAPLLVPAVKALGVNPLHF GVIFIVNIMIGGLTPPFGSMMFTVCSIVGVRLEGFIKEVWPFIVALLVVLFVVTYSESIA LFIPNLFLK >gi|292606576|gb|ADGG01000034.1| GENE 98 103293 - 103763 507 156 aa, chain - ## HITS:1 COG:FN1257 KEGG:ns NR:ns ## COG: FN1257 COG3090 # Protein_GI_number: 19704592 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Fusobacterium nucleatum # 10 156 1 147 147 182 88.0 3e-46 MKDFFKKFELYVGSVFISITTVVVIMNVFTRYFLKFTYFWTEEIAVGCFVWTIFLGTAAA YREKGLIGVEAIVVLLPEKIRNVVEFLTYILLTVLSGLMCLFSLTYVMSSSKITAALELS YGYINISIVISFALMTLYSIIFTIESFKKAFLSKGN >gi|292606576|gb|ADGG01000034.1| GENE 99 103857 - 104900 298 347 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020579|ref|YP_526406.1| ribosomal protein L22 [Saccharophagus degradans 2-40] # 3 326 10 320 331 119 27 6e-26 MKKILSLIFLSLFTLLLVACGGKKEEATKEGGEAKKEARVIKVTTKFVDDEQTAKSLVKV VEAINARSNGSLELQLFTSGTLPIGKDGMEQVANGSDWILVDGVNFLGDYIPDYNAVTGP MLYQSFEEYLRMVRTPLVQDLNAQALEKGIKVLSLDWLFGFRNIEAKKPIKTPEDMKGLK LRVPTSQLYTYTIEAMGGNPVAMPYPDTYAALQQGVIDGLEGSILSYYGTKQYENVKEYS LTRHLLGVSAVCISKKCWDSLTDEERTIIQEEFDKGAQDNLTETQRLEDEQAQALKDNGV TFHEVDAEAFNKAVAPVYEKFPKWTPGIYNKIMENLTQIREDIKNGK >gi|292606576|gb|ADGG01000034.1| GENE 100 105184 - 105777 634 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 6 195 3 192 192 248 57 7e-65 MTRDEKLNKLIEDIKNDEENKKYTEQGIDPLFSAPKEARIVIVGQAPGLKAQENKLYWKD KSGDKLRLWTGIDEKTFYSSNLLAIIPMDFYYPGKGKSGDLPPRKDFGEKWHNKILELLP NVELFILIGKYAQEFYLNGRTKENLTETVHSYKEYLPKFFPIVHPSPLNIGWLKKNPWFE KEVVPELKEMVTKIMKK >gi|292606576|gb|ADGG01000034.1| GENE 101 105778 - 107082 1402 434 aa, chain - ## HITS:1 COG:FN1260 KEGG:ns NR:ns ## COG: FN1260 COG0642 # Protein_GI_number: 19704595 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 8 432 1 425 427 581 77.0 1e-166 MKKISKELLKTYYWVIFLFTVFSVFIIINFSIYLWKENENDIKLVEEYIEYEMTALDERT DTSSKSKEEILMEIIDEAPKLRDVYLEIFYNDKKYAKAPYLPDRRHNFLDYYSVTKIYQP DNFNEVKVNITRRNVRDRKLIINAFASFVFFLLFCLFIIIKIQKKFFDKFKNSIDNLKIF TQDYDFNSKIKIHNEENFIEFSILQKSFKNMLTRLEEQSQSQSNFVNNASHELKTPIFVL KGYVDMLNDWGKNDKEVLDESLIVLKKEIQNMQDLTEKLLFLAKSKNLVVEKKSVNLDTI LKETIDNLNFAYPDQLINYSSAEIFIDSDDALLRLLFKNLIENAIKYGNNNPVNVILEKG RKIKVIIEDFGLGISKEALPHIFERFYREDEARNREIKSYGLGLSIVNEILSLLDIDIQV DSELGKGTKITLEM >gi|292606576|gb|ADGG01000034.1| GENE 102 107086 - 107760 721 224 aa, chain - ## HITS:1 COG:FN1261 KEGG:ns NR:ns ## COG: FN1261 COG0745 # Protein_GI_number: 19704596 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 224 10 233 233 355 82.0 4e-98 MNKILIIEDDKNIQRLLSLELKHKGYMVSSAYDGEEGLELFTKNSYDVVLLDLMLPKKSG KELCQEFRKLTDTPIIITTAKDNVLDKVELLDLGANDYICKPFAIEELLARIRVVTRNRE NSSDKQIYFENEIKLDLTTKKVFINQKEISLTKTEFLILEYFMKNRAISCSREKILTGVW GYDFDGEEKIVDVYINSLRKKMDTESKYIHTIRGFGYIFQYKED >gi|292606576|gb|ADGG01000034.1| GENE 103 107983 - 109542 1505 519 aa, chain + ## HITS:1 COG:FN1262 KEGG:ns NR:ns ## COG: FN1262 COG1807 # Protein_GI_number: 19704597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Fusobacterium nucleatum # 1 519 1 519 519 703 75.0 0 MFSTRRKDIFVLVVLSLFAYLSIIAIREIDSAEARNFIAAREMLENSSWWSPTVNGHFYF ENPPLPTWLTAIIMMITRSHSEAILRIPNMLCCIFTVLFLYRSMIRIKKDRLFAFLCSFV LLSTFMFIKLGAENTWDIYTYTFAFCASLAFYLYVRDGQRKNLYRMAILIFLSFLSKGPV GFYSVFIPFLLAHYIIFPKEIFKKRTFFVLLTLVISIALSLIWAFSMFFNHGDFFLSIVK DEVNAWATKHHRSFIFYTDYFVYMGSWLFFSIFVIFKIPEKKEEKVFWLWTILSLIFISI IQMKKKRYGLPIYLTSSITIGQLCIYYFRKTYAELKKREKTLLIIQQLFLLFVIFASLIF LTYFGYIKKEISFGLFFLYAALHLLFLFLFAVGYTEISYAKRVIIFSGLTMLLVNFSSSW ILESKFMQNNLLKFRMPIDEEILKSSDPIYAEAYDIEDVWKLGKQIKTLNKNMPDEREII FLGKEEPKSLSKVYEVKKVYEYQKVTHKMERIYILERIY >gi|292606576|gb|ADGG01000034.1| GENE 104 109664 - 109909 377 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237744984|ref|ZP_04575465.1| ## NR: gi|237744984|ref|ZP_04575465.1| conserved hypothetical protein [Fusobacterium sp. 7_1] # 1 81 1 81 131 145 93.0 6e-34 MKEKYIYPCVVYEEDGIYYANFKDFDACFTDGENIEEVIINAKDVLEGTIFSLLKNNLEV PKPTLTKPNLENNEFLVYIDI Prediction of potential genes in microbial genomes Time: Thu May 19 21:55:41 2011 Seq name: gi|292606575|gb|ADGG01000035.1| Fusobacterium sp. 1_1_41FAA cont1.35, whole genome shotgun sequence Length of sequence - 1709 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 225 139 ## COG1943 Transposase and inactivated derivatives - Prom 250 - 309 3.1 2 2 Op 1 . - CDS 328 - 909 880 ## COG3210 Large exoproteins involved in heme utilization or adhesion 3 2 Op 2 . - CDS 931 - 1461 444 ## gi|256028735|ref|ZP_05442569.1| hypothetical protein PrD11_12185 - Prom 1561 - 1620 4.9 Predicted protein(s) >gi|292606575|gb|ADGG01000035.1| GENE 1 3 - 225 139 74 aa, chain - ## HITS:1 COG:asl7246 KEGG:ns NR:ns ## COG: asl7246 COG1943 # Protein_GI_number: 17233262 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 12 74 1 63 70 99 69.0 2e-21 METDLDHIHILIECSPQHFIPNILKIFKGISARKLFLKHPEIKNKLWNGHLWNPSYFVAT VSENTEEQIKRYIQ >gi|292606575|gb|ADGG01000035.1| GENE 2 328 - 909 880 193 aa, chain - ## HITS:1 COG:FN1817 KEGG:ns NR:ns ## COG: FN1817 COG3210 # Protein_GI_number: 19705122 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Fusobacterium nucleatum # 2 188 2252 2440 2806 179 56.0 2e-45 MDEINDIGNVIANTIDNKGEDKRNFFGILRAQRGATDLYNISGDSLNLLNEAYKSNKIGA DEYKEGLRNIIEATGNDLGLNVSLVYLDTSTMPKDSKGSVGAAYIDKETGRTLIPINTDK IGSISELLGTVFEEISHIRDGLAGRQDKKVADDKSNNEKGLESLGRPSNDYAKKKFEKND SSINLTTDQYHIV >gi|292606575|gb|ADGG01000035.1| GENE 3 931 - 1461 444 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|256028735|ref|ZP_05442569.1| ## NR: gi|256028735|ref|ZP_05442569.1| hypothetical protein PrD11_12185 [Fusobacterium sp. D11] # 1 176 1 176 176 254 99.0 2e-66 MRKYFLKILLVILVILIILFFKACVTYRTKGKYTINSHEKYNIEKFTKIPNLKSVDILYS GKINFILYDNTCNLVLRKIEIYYKNKLLGRTNININICKLENLNESENSKFYSLQNFLLE VFGKENEKIELDYTNTGEYYFYIYIKDTNINKEYKIEKIESIFFEKKGFDIFVPNI Prediction of potential genes in microbial genomes Time: Thu May 19 21:55:53 2011 Seq name: gi|292606574|gb|ADGG01000036.1| Fusobacterium sp. 1_1_41FAA cont1.36, whole genome shotgun sequence Length of sequence - 18217 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 5, operones - 4 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 160 - 354 195 ## gi|294782848|ref|ZP_06748174.1| conserved hypothetical protein - Prom 571 - 630 18.1 2 2 Op 1 . + CDS 852 - 1766 1052 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 3 2 Op 2 . + CDS 1823 - 2542 935 ## FN0577 hypothetical protein 4 2 Op 3 . + CDS 2574 - 3317 1031 ## FN0577 hypothetical protein 5 2 Op 4 1/0.000 + CDS 3296 - 5140 1576 ## COG0514 Superfamily II DNA helicase 6 2 Op 5 . + CDS 5137 - 9984 5903 ## COG2373 Large extracellular alpha-helical protein + Term 10005 - 10052 7.2 + Prom 10029 - 10088 8.2 7 3 Op 1 . + CDS 10152 - 10964 868 ## gi|294782854|ref|ZP_06748180.1| stage V sporulation protein K 8 3 Op 2 . + CDS 10961 - 11836 925 ## gi|294782855|ref|ZP_06748181.1| conserved hypothetical protein + Prom 11977 - 12036 10.0 9 4 Op 1 1/0.000 + CDS 12173 - 14419 1941 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC 10 4 Op 2 23/0.000 + CDS 14423 - 15592 1603 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 11 4 Op 3 . + CDS 15567 - 16262 271 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 16301 - 16360 6.2 12 5 Op 1 40/0.000 + CDS 16392 - 17066 982 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 13 5 Op 2 . + CDS 17044 - 17724 700 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|292606574|gb|ADGG01000036.1| GENE 1 160 - 354 195 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782848|ref|ZP_06748174.1| ## NR: gi|294782848|ref|ZP_06748174.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 64 17 80 80 80 100.0 3e-14 MINSSEYKEISNLDKKEPSKRYKELDKKYLISKFELNKYVKPMTQKFNMKSLLIKVIILL ERKN >gi|292606574|gb|ADGG01000036.1| GENE 2 852 - 1766 1052 304 aa, chain + ## HITS:1 COG:FN0571 KEGG:ns NR:ns ## COG: FN0571 COG0758 # Protein_GI_number: 19703906 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Fusobacterium nucleatum # 1 304 1 304 304 412 77.0 1e-115 MYSKEELLIFSIINSKYDIGIQNLVNKIFKFSNKENLNFFNLNREDKIEFLSNFLSEENI EKILDIFDKDDFYKFEIEKIRKICEEKNIDIFYHSYENYPKSLINIKESPYVIFVKGTLP IDKELEKAFAIVGTRKASREGINFAKDIGTYLAKNDIYNISGLALGIDTIGHETCLHRTG AILGQGLDLEIYPRENINLVDRILENNGFLLSELIPKQELSMFSLIKRDRLQSALTSGII IAESGIKGGTVNTFKYAKEQKKKIFIADINKDFIEKYGKDLIIIKNSFDFEKKIKNNLEQ INLF >gi|292606574|gb|ADGG01000036.1| GENE 3 1823 - 2542 935 239 aa, chain + ## HITS:1 COG:no KEGG:FN0577 NR:ns ## KEGG: FN0577 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 238 1 240 241 248 57.0 9e-65 MSNINEFKKLYNFEFEEIKTGSFEEVSKKYLTLYKDGKEKGYTPVFLTVDDYLLKTFEIS MKDENTDNMIDIFNKNLEKAKNINPIELFNKFIEQNADSIKSNVNEDFKKNNYEINDSNK NNLKFLTIFNNEGNLKDNVILVKVPTTNPYEILAYFGMGSEGIATVKYWYEKYGAVPAAI TYDEIEFYVERPVLTFEEAKKLAVEQYAFCYGLLWECYDTLDELASAIYKNVHWYFWWS >gi|292606574|gb|ADGG01000036.1| GENE 4 2574 - 3317 1031 247 aa, chain + ## HITS:1 COG:no KEGG:FN0577 NR:ns ## KEGG: FN0577 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 247 1 241 241 323 74.0 3e-87 MSNIENFKELYNFEFEEIKAESFEEVSKKYLAAYKDGKEKGYTPVFLVLDDNLLETFEIS MEDEDTDNMMELVKSNLEKYKNINAVEFLKKFQEQTTDDVKENIEEYFTNDDYEFDDDDK SNLELSTVFDYDGNFKDNVILVKVPTTKPYEVLAYFGMGGYNSCPFPAEQVAVAKYWYEK YGAVPAAITYDEIEFYVERPVQTLEEAKKLAVEHYAFCYDLVDQCCGTFEALADGLYKNI QWYFWWD >gi|292606574|gb|ADGG01000036.1| GENE 5 3296 - 5140 1576 614 aa, chain + ## HITS:1 COG:FN0578 KEGG:ns NR:ns ## COG: FN0578 COG0514 # Protein_GI_number: 19703913 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Fusobacterium nucleatum # 1 613 1 613 614 1037 87.0 0 MVFLVGLKLKAEALRILKEYYGYDNFREGQEKIIDAILQKRNVLGIMTTGAGKSICYQVP ALVFKGLTIVISPLISLMKDQVDSLKLIGIDASYLNSTLTSDEYNKILFKIKKGQTKLLY ISPERLENKAFLNFIKTIKIAMVVVDEAHCVSQWGENFRKSYLRIADFIRYITDGVKIQT LAFTATATPKIKVDIIDKLKIENPFVFVDNFNRDNIYFKVIDNTGLDKDLNIDSKPFIID YLRKHKGKSGIIYCSTRKNVDDIYSYLVSFDRSVTKYHGGMTKEEREKNQNLFLNDDVEI MVATNAFGMGINKSNIRYVIHANIPADLESYYQEAGRAGRDGGKSEAILIYNEKDRDIQR FLMEKESEGRKDEDYLTKKLKSFNKMIEYAELKTCYREFILKYFGEKMIRNYCGFCENCK KEKNIKDFSLEAKKIISAVGRTKESLGISTLSNMLMGKADTKMLSKGLNKISTFGIMRED KQEWIESFINYMISEKYLIQSAGSFPVLKLGKNYKDILNDNIKIIRKENEKIDFDYYENA LFKELNSLRKEISKKENIAPYIIFSDMTLIEMAEKKPTNRWEMLKIKGIGNQKFTNYGER FLERINAYNMEEKK >gi|292606574|gb|ADGG01000036.1| GENE 6 5137 - 9984 5903 1615 aa, chain + ## HITS:1 COG:FN0579 KEGG:ns NR:ns ## COG: FN0579 COG2373 # Protein_GI_number: 19703914 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Fusobacterium nucleatum # 9 1615 2 1611 1611 2248 77.0 0 MKKFLKLFFALSLLMLALVACQKDKEKAQTEQGQTEQEQNYDYQEMLYVNNAGFNISGDL VIMFSDEIDKNQEFNKLIEVEGLDGDITIMPFNSKIIIKGDFQKEVPYSVKVSKGIKSVS GNELNEDYTRYNLYVGKKQPALAFADYGNVLPSVNNKKINFNSVNIKKVKLEIVKIYTNN ITQYLKLSSNEYSLDWSVKEDIGDVVFSKEYEIESKEDEVVKNSIDLNGVIDTKGIYYVK LTSVGEESIDYDIAKYGEPLSFGYEDQPIYAKATKTIILSDIGIVANSNDSKLDIKLLNL NTLNPIGSAKLEFINSKNQTLEEGTTNSNGEYRSKVNLENVYYVLVKSGNEFNVLYLSDS KINYADFDIGGSLEGSDLKLYTYTDKGYYRPGDEINVSLIARSKEKMNDEHPFEYSFTAP DGSNKINNEVVKESKNGFYTFKIKTDVNDLNGAWTLTIKFGGKEVTQKVFIESKVANSIA IEADEDKIYSKADIKDGLMRFKFDFKYLSGAKLDKDSNVNLDYNVIEREPRSKKYKNFVF VNPSNYKYQFRNFAETKTDDSGELELRLEMPQALQNKNLYLSTTVNVQDASGRYSTENKV FTIINRENSVGVQKLDQNGNEASVKYILLNEKTDSLVAGKKLKYRVYNKQNNWWYDYYED DEKSFKENMETTLLEEGEITSASDAEILKVSSLADGVNFIEIEDEETGHSSGVFVYNYHY GDKKTGTIENLKASTDKEKYDIGDIAKIKYTGSIGSKALVTIEKDGKIIKEYWKTLTSTE NEETIVIEKDFFPNAYVSISVFQKYVDKQNDRPLRLYASLPLMVEDKSKMLTINIDTKTE VLPAGDLNIKLSNKEKKKMYYEVFLVDEGVLRKTDYKKPDPYKFFYEKRAKLVQNFDNFS NIIEKYSDKVMNRLKTGGGDYEELAAEATDRAKVASDQKDELQLQGEAQRFKNLTIFRGV AESDENGNAELNIKVPNFFGQMRVFVVAVSDESYGSAEKSISVKAPVIVDSSAPRVLKVG DKFTVPVTLFPIEKAIGDSEVTLTYNGKTYSKKVNVKDGQNEKLLFELDAPDTVGTTKID IDFKSSKYSFKDSIDLNVDTNYPYQYVEKSLVLEPNQEFTLSMDEYKDFINGSIKSNISL SSYQKLGIERLIKSLMDYPYICLEQISSKGLSMLYIDKLTTDLVEKNDAKNEINTIIAKL NNNYQLRNGAFAYWPGSQEESMSTIYAIEFLIEAKERGYYIPEAMFENAQAYLNSIAMRV DIPKADVLYLLASLNDPNVSEMNIFFDRYYNDASLVDKWTLLGAYAKIGEKDFARKEAEK LPKKAETKDGIYYADQNAKILRYYTEIYGSPEPSLYSSVLGTAKSDEWLTTFEKAHIVQA LAEGEKVSPEKKNLSFKLIVDGKEQNLELKDGEYTLKNLGIKENAKKIVIKNTSTSKIYV NSFVKGKPVKYEEKDESKNITITRRFVDMSGKEIDVKNLKAGTRFRMIISSKVDNNNLDD ISLLQILPSGWEFDNSQAGAPQNSDPQVVPMNTADIDNAEYGGEMNIADNSSYTDMRDDR VAYFFPLYAGEDKEIEINLIAVTPGSYRLPGTKIESMYNKDFRAYLKGFEVKVSQ >gi|292606574|gb|ADGG01000036.1| GENE 7 10152 - 10964 868 270 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782854|ref|ZP_06748180.1| ## NR: gi|294782854|ref|ZP_06748180.1| stage V sporulation protein K [Fusobacterium sp. 1_1_41FAA] # 1 270 1 270 270 416 100.0 1e-115 MKIKLRIDKDEEFDYSESNYTMPIIINRTMILGVYDVCFFEMTDNIWRQLPEEYKKKIYK HNWKKFIKNMVIIITDITAYSFNFNYNNKQKENIAMEEIYKNFDKNKEINYFITGCDFPN SSMLVYFQNLGEVYAEVELDDIVAISDKNTFNDYFVELEKEYNRKKNREQNLAKLEQIYN KQLIVKSLVNKNINELSKEEIQKVLENFLLIDNLKYLLEVIKKSKEFEIVISNKLKDEIG HWLRDIQIKIKTEEEEKMYQEIKEFLKEQL >gi|292606574|gb|ADGG01000036.1| GENE 8 10961 - 11836 925 291 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294782855|ref|ZP_06748181.1| ## NR: gi|294782855|ref|ZP_06748181.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 291 1 291 291 434 100.0 1e-120 MKIKIKLESLENILNLSDSFCTTPIIMDKSMMFGAYGVDLNMSEYIWYQLPEECKNKIYN YKEHTIKAMIITLTNISAYSVSLSNHEKFKESITMEEFYEDFSENKKIERFLCECDFPYS NMSVYFQNLGEIYAEFELEDWVSYEKEVKEEWKIKERERRKIREIYKVEPEIIEGKVIKQ TLLEKTNEEKPEFASLIEKIFKTEKLSKKDFKIIFLIYPLILRYLDLEFLIKFTKSAEEL KIEIPENIKYDIGYQLVNMETEIKTEKEENLIKEIRDKLKLKKVLKIAYED >gi|292606574|gb|ADGG01000036.1| GENE 9 12173 - 14419 1941 748 aa, chain + ## HITS:1 COG:FN0580 KEGG:ns NR:ns ## COG: FN0580 COG4953 # Protein_GI_number: 19703915 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Fusobacterium nucleatum # 25 748 1 724 724 1209 89.0 0 MFKNINLKKVAIFIITLFILLFIYLIKIYVSYEPKKLVENINYSKIVLDRNGEILSVFLN KDEEFHLKYEGDIPETLKLAVLNYEDKKFYSHSGVDYPRILKSFFNNITGGKKMGASTIS MQVVKLLEPKKRTYFNKLIEIVKAYKLESQFSKEEILKIYLNNVPYGSNIVGYSAAIKMY FNKDVKDLSYAEASLLAVLPNSPGILNLKKNNDKLEEKRNRLLKTLLDKGLIDERQYKFS LLEKFPNKIYYYEKKAPQFSIFLKNRYKEKTIRSTLDYKLQKKLEKIVHDYSNTMKDTGI NNAAVLVVNNKTKEVLAYVASQDFYDKKNNGEIDGLQAKRSPASLLKPFLYALSIDEGLI VPDSIYPDVPIYFGNFYPKNSTGTFSGMVKMEDALIKSLNIPFVKLLSDYGIDKFYYFLE NNDNYPEDRFDKYGLSLILGTREMRPVDIVKLYVGLANYGKVSNLKYTLTEDVPKEYEQF SKGASYLTLETLSKVVRPGNEKLYSEERPISWKTGTSYGLKDAWSVGVSPDYTVLVWLGN FNQKSIFSLSGVETAGNLLFKVFNIVDINSKPFSKPMEDLKEIEIDEKTGYRKMYDVESK KVLYPKNAKLLRTSPYYKKIFVDEDDIEIDSRSEKFDKRKEKIVIEYPVEVSNYFFLNGV RENKKVKIAYPVENLNIFVPKDFEGYNKIAIKLYNPNNEYVYWYIDEEYMGFSNESERFF ELDMGKHKLTIVTEDGAREEVKFKINKR >gi|292606574|gb|ADGG01000036.1| GENE 10 14423 - 15592 1603 389 aa, chain + ## HITS:1 COG:FN0581 KEGG:ns NR:ns ## COG: FN0581 COG4591 # Protein_GI_number: 19703916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Fusobacterium nucleatum # 1 389 1 389 389 580 89.0 1e-165 MIEFFIAKKQMLERKKQSILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTSHINVY SPENIPNYEELVKNIEEVKGVKGAVPTIETQGIIKYEGHGEPYVAGVKVVGYDLDKAIKV MKLDDYIIDGKIDVEDKKSILIGKELAASMGAMVGDKVKLITSEETDLEMTIGGIFQSGF YEYDVNMVLIPLQTAQYVTYSDETVGRLSVRLDNPYDAQELIFDVARKLPTDLYIGTWGE QNRALLSALTLEKTIMLVVFSLIAIVAGFLIWITLNTLVREKTKDIGIMRAMGFSKKNIM LIFLIQGIILGIIGIILGIIVSLILLYYIKNYAVDLVSNIYYLKDIPIEISLKEIAIIVG ANFIVILISSIFPAYRAAKLENVEALRYE >gi|292606574|gb|ADGG01000036.1| GENE 11 15567 - 16262 271 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 218 1 225 329 108 31 2e-23 MWRHLDMNNMIIKLEDVDKFYMETGNKLHILKKLNLEVKRGEFVSILGKSGSGKSTLLNI MGLLDKIDGGKIWIDDKEVSSLNEAERNNIKNHFLGFVFQFHYLMSEFTALENVMIPALL NNFKNKAEIEKEAKELLEIVGLAERMKHKPNQLSGGEKQRVAIARAMINKPKLILADEPT GNLDEDTGEMIFSLFRKINKERNQSIVVVTHARDLSQVTDRQIYLKRGVLE >gi|292606574|gb|ADGG01000036.1| GENE 12 16392 - 17066 982 224 aa, chain + ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 224 1 224 224 345 84.0 5e-95 MRILVVEDEKDLNNIITKHLKKNNFSVDSVFNGEEALEYLDYGTYDLIVLDIMLPKVNGY EVIKKLRENKNETAVLMLTARDSIEDKIKGLDLGADDYLIKPFDFGELLARIRALVRRKY GNTSNTMEIDDLCIDIAKKTVVRGGKNIELTGKEYEVLEYLIQNKGHVLSRDKIRDSVWD YGYEGESNIIDVLIKNIRKKIDIGNSKPLIHTKRGLGYVLKEDE >gi|292606574|gb|ADGG01000036.1| GENE 13 17044 - 17724 700 226 aa, chain + ## HITS:1 COG:FN0586 KEGG:ns NR:ns ## COG: FN0586 COG0642 # Protein_GI_number: 19703921 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 1 225 1 225 445 296 72.0 2e-80 MFLKKMNRFLSRIPVSIRVTVWFSSVIVILFLIILSSLILIEDKVVNDLSQKELVEAVEE IYEEPEKFENFNDGIYYIKYNKENEIIAGKFPKDFDIALAFSIEDINIYQVENKKFLYYD TKLEDEDDWIRGIYPLGKVQKEIETLWNIAIALSVLFLIFVVIVGYRIIKNAFKPVKQIS DTALKIKRSKDFSNRIELEDSSDDEIHKMASTFNEMLDTVEEVFIK Prediction of potential genes in microbial genomes Time: Thu May 19 21:57:11 2011 Seq name: gi|292606573|gb|ADGG01000037.1| Fusobacterium sp. 1_1_41FAA cont1.37, whole genome shotgun sequence Length of sequence - 131726 bp Number of predicted genes - 127, with homology - 126 Number of transcription units - 45, operones - 30 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 217 92 ## FMG_P0136 putative transposase 2 1 Op 2 . + CDS 262 - 963 788 ## COG0642 Signal transduction histidine kinase + Term 968 - 1019 13.1 - Term 952 - 1009 16.1 3 2 Op 1 . - CDS 1012 - 1269 405 ## SSA_0394 hypothetical protein - Prom 1293 - 1352 14.0 4 2 Op 2 . - CDS 1420 - 1995 672 ## COG1802 Transcriptional regulators - Prom 2088 - 2147 15.4 + Prom 2108 - 2167 12.1 5 3 Op 1 . + CDS 2228 - 3223 1401 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 6 3 Op 2 . + CDS 3235 - 4425 1048 ## COG0786 Na+/glutamate symporter 7 3 Op 3 11/0.000 + CDS 4443 - 5468 285 ## PROTEIN SUPPORTED gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 8 3 Op 4 11/0.000 + CDS 5483 - 5974 501 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 9 3 Op 5 . + CDS 5971 - 7278 808 ## PROTEIN SUPPORTED gi|90020581|ref|YP_526408.1| ribosomal protein L16 + Term 7316 - 7363 11.1 - Term 7305 - 7348 6.5 10 4 Tu 1 . - CDS 7385 - 8566 1626 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 8780 - 8839 7.0 + Prom 8546 - 8605 10.5 11 5 Op 1 1/0.222 + CDS 8712 - 10925 2449 ## COG0210 Superfamily I DNA and RNA helicases 12 5 Op 2 4/0.000 + CDS 10936 - 11769 1050 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 13 5 Op 3 25/0.000 + CDS 11789 - 12214 615 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 14 5 Op 4 5/0.000 + CDS 12233 - 13006 1081 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 15 5 Op 5 5/0.000 + CDS 13006 - 13809 967 ## COG3494 Uncharacterized protein conserved in bacteria 16 5 Op 6 1/0.222 + CDS 13819 - 14889 1270 ## COG0763 Lipid A disaccharide synthetase 17 5 Op 7 . + CDS 14886 - 16637 2096 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 16651 - 16699 7.1 - Term 16639 - 16687 3.3 18 6 Op 1 1/0.222 - CDS 16702 - 17295 420 ## COG2849 Uncharacterized protein conserved in bacteria 19 6 Op 2 . - CDS 17340 - 18383 1188 ## COG2849 Uncharacterized protein conserved in bacteria 20 6 Op 3 . - CDS 18396 - 19712 1822 ## COG0527 Aspartokinases 21 6 Op 4 . - CDS 19712 - 20842 1628 ## COG0460 Homoserine dehydrogenase - Prom 20889 - 20948 9.8 + Prom 20817 - 20876 8.1 22 7 Op 1 19/0.000 + CDS 20935 - 22392 1902 ## COG0498 Threonine synthase 23 7 Op 2 . + CDS 22380 - 23264 1191 ## COG0083 Homoserine kinase 24 7 Op 3 . + CDS 23266 - 24336 1526 ## COG0136 Aspartate-semialdehyde dehydrogenase 25 8 Tu 1 . - CDS 24655 - 25380 837 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Term 25392 - 25426 4.0 26 9 Op 1 3/0.000 - CDS 25436 - 27262 2269 ## COG0747 ABC-type dipeptide transport system, periplasmic component 27 9 Op 2 3/0.000 - CDS 27291 - 29120 2583 ## COG0747 ABC-type dipeptide transport system, periplasmic component 28 9 Op 3 5/0.000 - CDS 29163 - 31001 2461 ## COG0747 ABC-type dipeptide transport system, periplasmic component 29 9 Op 4 49/0.000 - CDS 31038 - 31940 1052 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 30 9 Op 5 6/0.000 - CDS 31953 - 32915 1296 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 31 9 Op 6 44/0.000 - CDS 32940 - 33875 720 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 32 9 Op 7 . - CDS 33872 - 34879 627 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 35001 - 35060 10.4 + Prom 35051 - 35110 12.8 33 10 Tu 1 . + CDS 35334 - 37013 2113 ## COG1164 Oligoendopeptidase F + Term 37027 - 37092 15.1 - Term 37016 - 37076 17.2 34 11 Op 1 . - CDS 37137 - 38720 1588 ## gi|294782894|ref|ZP_06748220.1| hypothetical protein HMPREF0400_00875 35 11 Op 2 . - CDS 38710 - 38862 58 ## gi|294782895|ref|ZP_06748221.1| hypothetical protein HMPREF0400_00876 36 11 Op 3 6/0.000 - CDS 38933 - 40954 3017 ## COG2987 Urocanate hydratase 37 11 Op 4 . - CDS 40981 - 42531 2428 ## COG2986 Histidine ammonia-lyase - Prom 42635 - 42694 12.3 + Prom 42716 - 42775 12.8 38 12 Op 1 1/0.222 + CDS 42813 - 43931 851 ## COG1940 Transcriptional regulator/sugar kinase 39 12 Op 2 . + CDS 43949 - 44794 825 ## COG1284 Uncharacterized conserved protein 40 12 Op 3 . + CDS 44813 - 45232 474 ## FN0788 hypothetical protein + Term 45260 - 45292 3.2 - Term 45248 - 45280 3.2 41 13 Op 1 29/0.000 - CDS 45291 - 46466 1878 ## COG2025 Electron transfer flavoprotein, alpha subunit 42 13 Op 2 2/0.000 - CDS 46486 - 47274 1268 ## COG2086 Electron transfer flavoprotein, beta subunit 43 13 Op 3 . - CDS 47298 - 48443 1801 ## COG1960 Acyl-CoA dehydrogenases - Prom 48547 - 48606 11.7 + Prom 48526 - 48585 13.6 44 14 Op 1 1/0.222 + CDS 48647 - 49378 606 ## COG4123 Predicted O-methyltransferase 45 14 Op 2 12/0.000 + CDS 49390 - 50148 703 ## COG2966 Uncharacterized conserved protein 46 14 Op 3 1/0.222 + CDS 50166 - 50657 489 ## COG3610 Uncharacterized conserved protein 47 14 Op 4 1/0.222 + CDS 50676 - 51560 1174 ## COG0523 Putative GTPases (G3E family) 48 14 Op 5 17/0.000 + CDS 51571 - 52287 759 ## COG0500 SAM-dependent methyltransferases 49 14 Op 6 1/0.222 + CDS 52332 - 52796 368 ## COG0500 SAM-dependent methyltransferases 50 14 Op 7 . + CDS 52824 - 54626 2299 ## COG0481 Membrane GTPase LepA - TRNA 54802 - 54878 72.1 # Arg CCT 0 0 + Prom 54891 - 54950 10.5 51 15 Op 1 . + CDS 55062 - 55937 882 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 55971 - 56030 12.7 52 15 Op 2 . + CDS 56067 - 57449 1971 ## COG1262 Uncharacterized conserved protein + Term 57450 - 57503 6.1 - Term 57445 - 57480 3.8 53 16 Op 1 . - CDS 57485 - 57766 316 ## COG1171 Threonine dehydratase 54 16 Op 2 . - CDS 57822 - 58700 1173 ## COG1171 Threonine dehydratase - Prom 58826 - 58885 13.0 + Prom 58842 - 58901 18.0 55 17 Op 1 2/0.000 + CDS 58995 - 60695 1942 ## COG0500 SAM-dependent methyltransferases 56 17 Op 2 4/0.000 + CDS 60697 - 61296 438 ## COG0558 Phosphatidylglycerophosphate synthase 57 17 Op 3 . + CDS 61298 - 62104 595 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 58 17 Op 4 . + CDS 62172 - 62366 415 ## FN1309 hypothetical protein - Term 62381 - 62442 9.4 59 18 Tu 1 . - CDS 62451 - 63800 886 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Term 63862 - 63913 5.1 60 19 Op 1 . - CDS 64161 - 64742 772 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 61 19 Op 2 . - CDS 64739 - 65512 770 ## FN1131 hypothetical protein 62 19 Op 3 1/0.222 - CDS 65518 - 66522 1147 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 63 19 Op 4 . - CDS 66556 - 70107 4158 ## COG1196 Chromosome segregation ATPases - Prom 70133 - 70192 14.1 64 20 Op 1 1/0.222 - CDS 70212 - 71567 1861 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 65 20 Op 2 1/0.222 - CDS 71580 - 72938 1517 ## COG0569 K+ transport systems, NAD-binding component 66 20 Op 3 16/0.000 - CDS 72951 - 73445 651 ## COG0262 Dihydrofolate reductase 67 20 Op 4 . - CDS 73445 - 74272 1154 ## COG0207 Thymidylate synthase 68 20 Op 5 . - CDS 74332 - 74589 134 ## gi|237745328|ref|ZP_04575809.1| predicted protein - Prom 74616 - 74675 5.0 69 21 Op 1 . - CDS 74702 - 75085 224 ## gi|294782924|ref|ZP_06748250.1| conserved hypothetical protein - Prom 75111 - 75170 7.4 70 21 Op 2 . - CDS 75185 - 75568 206 ## gi|294782925|ref|ZP_06748251.1| conserved hypothetical protein - Prom 75593 - 75652 5.0 71 22 Op 1 . - CDS 75660 - 76001 334 ## gi|294782926|ref|ZP_06748252.1| membrane-spanning protein 72 22 Op 2 . - CDS 76017 - 76379 205 ## gi|294782927|ref|ZP_06748253.1| hypothetical protein HMPREF0400_00911 - Prom 76412 - 76471 8.5 - Term 76426 - 76467 5.8 73 23 Op 1 . - CDS 76481 - 76630 111 ## 74 23 Op 2 . - CDS 76706 - 77467 909 ## gi|294782929|ref|ZP_06748255.1| conserved hypothetical protein 75 23 Op 3 . - CDS 77486 - 78211 900 ## gi|294782930|ref|ZP_06748256.1| DNA/RNA non-specific endonuclease - Prom 78237 - 78296 9.2 76 24 Tu 1 . - CDS 78299 - 78808 519 ## gi|294782931|ref|ZP_06748257.1| conserved hypothetical protein - Prom 78945 - 79004 7.0 + Prom 78817 - 78876 6.0 77 25 Tu 1 . + CDS 78937 - 79806 1056 ## COG3878 Uncharacterized protein conserved in bacteria 78 26 Tu 1 . - CDS 79947 - 80474 863 ## COG0778 Nitroreductase - Prom 80499 - 80558 5.8 - Term 80510 - 80559 5.1 79 27 Op 1 3/0.000 - CDS 80608 - 81573 943 ## COG0679 Predicted permeases 80 27 Op 2 . - CDS 81598 - 83226 2098 ## COG0281 Malic enzyme - Prom 83285 - 83344 6.4 - Term 83298 - 83348 9.4 81 28 Tu 1 . - CDS 83386 - 84087 937 ## gi|294782936|ref|ZP_06748262.1| hypothetical protein HMPREF0400_00920 - Prom 84325 - 84384 11.9 + Prom 84035 - 84094 9.1 82 29 Tu 1 . + CDS 84265 - 85047 827 ## COG0388 Predicted amidohydrolase + Term 85053 - 85098 10.1 - Term 85033 - 85092 10.3 83 30 Op 1 1/0.222 - CDS 85112 - 85948 1174 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 84 30 Op 2 1/0.222 - CDS 85938 - 87395 1822 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 85 30 Op 3 . - CDS 87401 - 88078 685 ## COG0692 Uracil DNA glycosylase 86 30 Op 4 . - CDS 88091 - 88762 962 ## BCB4264_A2363 SMI1 / KNR4 family - Prom 88783 - 88842 2.8 - Term 88773 - 88821 6.3 87 31 Op 1 . - CDS 88844 - 89266 404 ## FN1229 hypothetical protein 88 31 Op 2 1/0.222 - CDS 89268 - 90089 1131 ## COG2849 Uncharacterized protein conserved in bacteria 89 31 Op 3 . - CDS 90105 - 91571 2039 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 91630 - 91689 5.2 90 32 Tu 1 . - CDS 91691 - 93103 1594 ## Lebu_0877 hypothetical protein - Prom 93133 - 93192 9.4 + Prom 93191 - 93250 10.5 91 33 Op 1 1/0.222 + CDS 93290 - 95209 2517 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 92 33 Op 2 . + CDS 95218 - 96615 1621 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 96638 - 96686 8.1 - Term 96621 - 96678 0.5 93 34 Tu 1 . - CDS 96697 - 96897 423 ## COG1278 Cold shock proteins + Prom 97096 - 97155 16.8 94 35 Op 1 . + CDS 97261 - 97791 723 ## FN1296 hypothetical protein + Term 97805 - 97849 4.2 95 35 Op 2 . + CDS 97856 - 98314 521 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 96 35 Op 3 . + CDS 98320 - 98844 474 ## FN1296 hypothetical protein + Term 98866 - 98896 -0.4 + Prom 98929 - 98988 10.7 97 36 Op 1 . + CDS 99010 - 99570 237 ## PROTEIN SUPPORTED gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase 98 36 Op 2 . + CDS 99567 - 101129 1489 ## FN1293 hypothetical protein 99 36 Op 3 . + CDS 101162 - 102601 1349 ## FN1292 hypothetical protein 100 36 Op 4 . + CDS 102588 - 104078 1278 ## FN1292 hypothetical protein 101 36 Op 5 . + CDS 104062 - 105618 1423 ## FN1291 hypothetical protein 102 36 Op 6 . + CDS 105628 - 107418 1609 ## FN1289 hypothetical protein 103 36 Op 7 2/0.000 + CDS 107483 - 107731 269 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 104 36 Op 8 . + CDS 107750 - 107863 200 ## PROTEIN SUPPORTED gi|197735973|ref|YP_002164751.1| hypothetical protein FNP_0496 + Prom 107980 - 108039 10.6 105 37 Op 1 48/0.000 + CDS 108059 - 108415 591 ## PROTEIN SUPPORTED gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P 106 37 Op 2 36/0.000 + CDS 108462 - 108851 660 ## PROTEIN SUPPORTED gi|237739947|ref|ZP_04570428.1| SSU ribosomal protein S11P 107 37 Op 3 26/0.000 + CDS 108894 - 109481 978 ## PROTEIN SUPPORTED gi|237739946|ref|ZP_04570427.1| SSU ribosomal protein S4P 108 37 Op 4 50/0.000 + CDS 109510 - 110490 1424 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 109 37 Op 5 . + CDS 110518 - 110868 575 ## PROTEIN SUPPORTED gi|237739944|ref|ZP_04570425.1| LSU ribosomal protein L17P + Term 110879 - 110927 8.6 - Term 110875 - 110908 2.3 110 38 Tu 1 . - CDS 110986 - 111489 922 ## COG0716 Flavodoxins - Prom 111683 - 111742 11.8 + Prom 111577 - 111636 15.1 111 39 Op 1 1/0.222 + CDS 111778 - 113085 497 ## PROTEIN SUPPORTED gi|229879795|ref|ZP_04499292.1| SSU ribosomal protein S12P methylthiotransferase 112 39 Op 2 . + CDS 113106 - 114344 1388 ## COG1158 Transcription termination factor 113 39 Op 3 . + CDS 114367 - 114735 257 ## gi|262066965|ref|ZP_06026577.1| cell wall endopeptidase family M23/M37 114 39 Op 4 1/0.222 + CDS 114735 - 115517 1082 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 115535 - 115569 2.0 115 40 Op 1 1/0.222 + CDS 115576 - 116631 1654 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 116 40 Op 2 . + CDS 116703 - 117152 258 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 117 40 Op 3 . + CDS 117153 - 117455 403 ## FN0480 hypothetical protein 118 40 Op 4 . + CDS 117472 - 117870 482 ## FN0481 hypothetical protein + Term 117871 - 117908 5.0 + Prom 117888 - 117947 11.0 119 41 Op 1 1/0.222 + CDS 117977 - 118222 421 ## PROTEIN SUPPORTED gi|237739934|ref|ZP_04570415.1| LSU ribosomal protein L31P + Term 118233 - 118264 1.1 120 41 Op 2 . + CDS 118280 - 118903 877 ## COG0035 Uracil phosphoribosyltransferase + Prom 118997 - 119056 6.0 121 42 Tu 1 . + CDS 119093 - 119881 742 ## FN0484 lipase (EC:3.1.1.3) + Term 119890 - 119939 4.1 - Term 119876 - 119925 4.1 122 43 Tu 1 . - CDS 119951 - 120961 1562 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 121007 - 121066 19.6 123 44 Tu 1 . + CDS 121339 - 122619 2014 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 122649 - 122684 5.3 - Term 122637 - 122672 5.3 124 45 Op 1 . - CDS 122761 - 126162 3399 ## COG0587 DNA polymerase III, alpha subunit 125 45 Op 2 . - CDS 126172 - 127956 1934 ## FN1385 hypothetical protein 126 45 Op 3 1/0.222 - CDS 127968 - 130658 2555 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 127 45 Op 4 . - CDS 130661 - 131374 713 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 131403 - 131462 15.4 - 5S_RRNA 131497 - 131612 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Predicted protein(s) >gi|292606573|gb|ADGG01000037.1| GENE 1 2 - 217 92 71 aa, chain + ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 1 70 346 415 416 102 75.0 4e-21 DEIPIYDKENLQEYVFSGKRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRG ELNTPKRIRVV >gi|292606573|gb|ADGG01000037.1| GENE 2 262 - 963 788 233 aa, chain + ## HITS:1 COG:FN0586 KEGG:ns NR:ns ## COG: FN0586 COG0642 # Protein_GI_number: 19703921 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 11 230 224 443 445 281 70.0 9e-76 MEPCDFSRGRFRHEKQFSSDVSHELRTPITVILAQSDYALQYSDTFEEAKESLEVINRHA KRMTNLINQIMELSKLERQKEIEKEKINLSNIVLQLLEDYKPLLESKNLNLVYNVEKDLR IQGNKIMLERVFLNILMNAVKFTKTNIEVSLTREDKTAVLKIRDDGIGISEENKKFIWER FFQVNDSRNKEENKGSGLGLSMVKKIVDLHSATIDLESELEQGTCFTIKFNMQ >gi|292606573|gb|ADGG01000037.1| GENE 3 1012 - 1269 405 85 aa, chain - ## HITS:1 COG:no KEGG:SSA_0394 NR:ns ## KEGG: SSA_0394 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 85 7 91 92 122 68.0 5e-27 MSDKQTKILGWLGTTLSILMYVSYIPQIMGNLNGNKTSFIQPLVAAINCTIWVCYGFFKK NRDLPLALANLPGIIFGLIAAFTAL >gi|292606573|gb|ADGG01000037.1| GENE 4 1420 - 1995 672 191 aa, chain - ## HITS:1 COG:BS_ydhC KEGG:ns NR:ns ## COG: BS_ydhC COG1802 # Protein_GI_number: 16077637 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 187 23 215 224 92 31.0 5e-19 MILSDEFKNEIKLNEVQIAAKLEVSPTPVREAFRMLAADGIVEIIPWKGVFIKKYSIEEI EEAYQCREVLEILAVKLCINIIPKDEIERLLKVLKENHDTIEERIKVSNEIHSIIIEYSN NKRLKNLITQLNDILTYDRRLSAYDGIRGKQIDQEHKLILKALKERNENAAIFYMKEHIQ NGFKYVKENHK >gi|292606573|gb|ADGG01000037.1| GENE 5 2228 - 3223 1401 331 aa, chain + ## HITS:1 COG:PH1048 KEGG:ns NR:ns ## COG: PH1048 COG2309 # Protein_GI_number: 14590885 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 23 321 24 319 320 192 38.0 7e-49 MKELLMCKIADKIIDVNLKMVAGEKLLIVTESEKLSIANAIATAAYRKNIEPIISLIIPR EADSQEPPEIIAASLKVADAFVSVVGKSITHTNAIKNAIENGARGLVLTQFSEDMMIHGG MEADFEKIKPVCLKVASKLANSKKVHLTTPFGTDLTFCAENRRGNALYCLVEKGKFSTAP TVEANVSPIEGTPEGIIVADASVPYIGIGLLKEPIICKVEKGFITSIEGGKQAEILSKDL ADKNDPNVYNVAELGIGLNPNCRFIGLMLEDEGVYGSCHIGIGTSLNLGGVLKAACHYDL IMTKPTIIADGVTIMKDGELVGEFYSDVYKK >gi|292606573|gb|ADGG01000037.1| GENE 6 3235 - 4425 1048 396 aa, chain + ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 4 392 5 390 399 299 44.0 5e-81 MKLELTMFNTTAIAVLILFLGSYIKAKVEILRKFCIPIPVVGGMIFTIFTLIGYTTNIFS ISFDFTLSDFFMLAFYTSIGFTASISLLKKGGVKTIKLLIVSSILVVLQNGIGIIICKFL GINPLIGIATGSIPMTGGHGTSAVFSVPLENLGLTAANTITLAAATFGLVAGSLTGGPLG RYLVEKSIKNNKINSNQKTSININKEMENKLSAKGFEQAIFLLLLAMALGTIISMLLGKT GLTFPASVGGMLASALIVNIKNFDKLYPIKHSEIHIFGEVSLAIFLSMSMMKLKLWQIID LAGPMLILLFAQVILIVIFIIFIAFPVMGKDYEAAVTCSGFCGYGLGAVPTGIANMDTLT EKYYPAPESFFIVPLVGSLFINIVNTFMITFFMNIV >gi|292606573|gb|ADGG01000037.1| GENE 7 4443 - 5468 285 341 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 [Alteromonas macleodii ATCC 27126] # 1 328 1 319 327 114 27 2e-24 MLKKFSLLLVIILSLFTFISCRPSENKKVETNEPIIIKIGHTDSSSRSTNIWSVELGKIL EEKAPGKFQVEVYPDGQLGDTPDLVAGVKLGTVTMMFDLSAAITAAAGPESACIDLPYLY PTYEDWVKGTFENGGLELFNEYLKKQGYYCIDMYYNGMRQVASVKRNYHNSNDLKGQKIR IAQNELNVDMWQAMGANPTPMSWGEVITSLSQGTIDALDHSLGVFNDFSLHKIAPYITLT NHASSPFPIVCSLDWINSLPEDLRKILEESIHEVAKKQREEERANELKYIERFKSEGATV QELTSDEVKAFQESVKPVYDKWRKKVGDDVVDKWLETVPKK >gi|292606573|gb|ADGG01000037.1| GENE 8 5483 - 5974 501 163 aa, chain + ## HITS:1 COG:FN1473_1 KEGG:ns NR:ns ## COG: FN1473_1 COG3090 # Protein_GI_number: 19704805 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Fusobacterium nucleatum # 7 144 1 138 188 71 28.0 8e-13 MKKSKFIQILDRLEETVLVGMFTLMVFIIFAQVIMRYIFNNSLSWSEELGKFLFVWISWL GISIGAKRKEHIKITMFVDKLSHKLNFLCDILSELIVFGICLVTAYYGFELVVSQSQVFF AGIKISMSWGYLSVVLGCILMMIRNLIIIMDTFTTFKKGGKEE >gi|292606573|gb|ADGG01000037.1| GENE 9 5971 - 7278 808 435 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020581|ref|YP_526408.1| ribosomal protein L16 [Saccharophagus degradans 2-40] # 1 430 3 422 435 315 37 5e-85 MTFLVLFIVLFIMLAIGVPVGFAIGGATMISMYFCSNLNMVVNAQYCFSGINSFTVMAIP FFMLAGLIMSTGGIAKRIVNFASALIDFVTGALGCVTILACMFFGALSGSGMATTSAIGG MMIPEMKKKGYSSEYAATLVCFGGIVGPIIPPSLSFVLYGATTNTSVPELFLAGVLPGIL LGVIFLLMNIFICKKTKIETREFEEEKNVTFKVLLQKRVKRIWVATKDGIWALLSPTIIL GGIYSGIFTPTEAACISVVYSAFVSFFIYKDLNLKALYNTLLDAAVLNGITSFLLGYSTV FSTFMTFEKVPQMISTFLTNISDNPFVVLFFINLILLFIGLFLDTVPAIIVMAPMLLPTI RSLGINPIHFGVVMAVNLAIGLCTPPYGCNLFVGAAVARIKLDKMFKLIIPFFLAAVFAL AIITYIPWLSLVFIK >gi|292606573|gb|ADGG01000037.1| GENE 10 7385 - 8566 1626 393 aa, chain - ## HITS:1 COG:FN0590 KEGG:ns NR:ns ## COG: FN0590 COG1473 # Protein_GI_number: 19703925 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 1 393 1 393 393 733 88.0 0 MEEKIKKLSEKYLERVMELRRELHKYPELGFDLFKTAEIVKKELDRIGIPYKSEIAKTGI VATIKGGKPGKTVLLRADMDALPLAEESRCSFKSTHEGKMHACGHDGHTAGLLGVGMILN ELKDELSGNIKLLFQPAEEEPGGAKPMIDEGILENPKVDAAFGCHIWPSIKAGHVAIKDG AMMSHPTTFEIIFQGKGGHASQPENTVDTVMVACQTVVNFQNIISRNISTLRPAVLSCCS IHAGEAHNIIPDKLFLKGTIRSFDEKITDNIIERMDEILKGITSAYGASYEFLVDRMYPA LKNDHELFNFSKNALEDILGKDNIEVMEDPVMGSEDFAYFGKHIPSFFFFVGVNDKQLEN ENMLHHPKLFWDEKYLITNMKTLSQLAVEFLNK >gi|292606573|gb|ADGG01000037.1| GENE 11 8712 - 10925 2449 737 aa, chain + ## HITS:1 COG:FN0592 KEGG:ns NR:ns ## COG: FN0592 COG0210 # Protein_GI_number: 19703927 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 3 736 1 734 735 1138 85.0 0 MNLNLLEKLNEKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENIGISPYSILAVT FTNKAAKEMRERVEDLVGEVAKSCTISTFHSFGMRLLRMYAAEVGYNPNFTIYDTDDQRR IIKAILKGQNITVNGNKLTERDLISIISKIKEEIKTVEEYSVMNKQIIEVYEKYNRNLIE SNAMDFSDILLNTYKLLQNSSILEKIQKKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC VVGDENQSIYGFRGANILNILNFENNYKNAKIIKLEENYRSTSTILDAANELIKNNKSSK DKKLWTQNGKGDLIKVLVCDNARDEVSKIIDIIKENHQNGIPYKDMTILYRTNMQSRVFE EGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIVNVPKRKVGEKGIE KIIAFARENNLNLLDALSHIKDISGLTATGKEKLSEMYDIIKELKDLSYSETASYIVETL LDKIKYIDYVKETYDDADARIENIEEFKNSILELENVVGVLRLSEYLENVSLVSATDDLE DEKDYIKLMTIHNSKGLEFPIVFLVGFENEIFPGARASFDEKEMEEERRLCYVALTRAEK KLYLSHTAIRFVYGQDRLATPSIFLKEIPEKLLDVEVKKERLYFEDDEFSDTRHSEKFKR FEKKKTEINTKNTIVIPDDVKKVLDTLGFKIGDKVKHKKFGLGVIKKMDAKKIYVQYVDE TREMAIILADKLLTKLN >gi|292606573|gb|ADGG01000037.1| GENE 12 10936 - 11769 1050 277 aa, chain + ## HITS:1 COG:FN0593 KEGG:ns NR:ns ## COG: FN0593 COG0774 # Protein_GI_number: 19703928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Fusobacterium nucleatum # 1 277 7 283 283 493 91.0 1e-139 MKRKTLKNVVEYDGIGLHKGEVIKMKLIPSKSTGIVFRMMNMPEGKNEILLDYRNTFDLT RGTNLKNEHGAMVFTIEHFLSALYVAGITDLIIELSGNELPICDGSAIKFLDLFHESGIV ELDEDVEEIVVKEPIFLSKGDKHIIALPYENGYKLTYAIRFEHTFLKSQLAEFEITEEVY KKEIAPARTFGFDYEVEYLKQNNLALGGTLENAIVIKKDGVLNPEGLRFEDEFVRHKMLD IIGDLKILNRPIRAHIIAVKAGHLIDIEFAKILDNIK >gi|292606573|gb|ADGG01000037.1| GENE 13 11789 - 12214 615 141 aa, chain + ## HITS:1 COG:FN0594 KEGG:ns NR:ns ## COG: FN0594 COG0764 # Protein_GI_number: 19703929 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Fusobacterium nucleatum # 1 141 1 141 141 259 93.0 9e-70 MLDVLEIMKRIPHRYPFLLVDRILEMDKENQTIKGKKNVTINEEFFNGHFPGHPIMPGVL IVEGMAQCLGVMVMENFPGKVPYFAAIESAKFKNPVKPGDTLIYDVKVEKVKRNFVKATG KTYVDDAVVAEANFTFVIADL >gi|292606573|gb|ADGG01000037.1| GENE 14 12233 - 13006 1081 257 aa, chain + ## HITS:1 COG:FN0595 KEGG:ns NR:ns ## COG: FN0595 COG1043 # Protein_GI_number: 19703930 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Fusobacterium nucleatum # 1 257 1 257 257 456 89.0 1e-128 MVDIHKTAIIEEGAIIEDGVTIGPYCVVGKDVIIKKGTVLQSHVVVEGITEIGENNTIYS FVSIGKANQDLKYKGEPTKTIIGNNNSIREFVTIHRGTDDRWETRIGSGNLLMAYVHVAH DVIIGDDCILANNVTLAGHVVVDSHAIIGGLTPIHQFTRIGSYSMIGGASGVNQDICPFV LAEGNKAVIRGLNSIGLRRRGFTDDEISNLKKAYRILFRQGLQLKDAIEELEKNFSDDKN IKYLVDFIKSSDRGIAR >gi|292606573|gb|ADGG01000037.1| GENE 15 13006 - 13809 967 267 aa, chain + ## HITS:1 COG:FN0596 KEGG:ns NR:ns ## COG: FN0596 COG3494 # Protein_GI_number: 19703931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 267 1 267 267 460 92.0 1e-129 MEKIGLIVGNGKFPLYFIEEAKNSNISVYPIGLFPSVDEEIKKLDNYAEFNVGHIGEIIK YLLLNDITKIVMLGKIEKKLIFENLILDKYGEKIMEIVPDKKDETLLFAIIGFIRLNGIK VLPQNYLMKRFIFEAKCYTEKEPDADDEKTISMGIEAARLLSRVDVGQTVVCRDKAVIAV EGIEGTDETLKRAGQYSDKDNILIKMSRPQQDMRVDVPVIGLHTVETAIQNGFKGIVAQA KKMIFLNQKECIELANKNNIFIIAKKI >gi|292606573|gb|ADGG01000037.1| GENE 16 13819 - 14889 1270 356 aa, chain + ## HITS:1 COG:FN0597 KEGG:ns NR:ns ## COG: FN0597 COG0763 # Protein_GI_number: 19703932 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Fusobacterium nucleatum # 1 356 1 356 356 603 92.0 1e-172 MKFFVSTGEASGDLHLSYLVKSVKSRYKDVDFVGVAGEKSKKEGVEILQDISELAIMGFT EAIKKYKFLKQKAYEYLQYIKDNQIENVILVDYGGFNVKFLELLKNEIMDIKIFYYIPPK VWIWGEKRVEKLRLADYIMVIFPWEVDFYKKHNIDAVYFGNPFTDFYKKVERTGDKILLL PGSRRQEIRAMLPVFEEIISDLKDDKFILKLNSEQDLVYTENLKKYANLEIIIDKELKDI VGDCKLSIATSGTITLELALLALPSIVVYKTSLINYLIGKYILKIGYISLPNLVLNDEIF PELIQKDCEAKNIEKHMKKILENLPEIEKKIENMRKKVEGKAVVESYADFLIKEGK >gi|292606573|gb|ADGG01000037.1| GENE 17 14886 - 16637 2096 583 aa, chain + ## HITS:1 COG:FN0598 KEGG:ns NR:ns ## COG: FN0598 COG1132 # Protein_GI_number: 19703933 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Fusobacterium nucleatum # 1 582 1 582 583 982 92.0 0 MKILNFKNKSLNVFLGYSYRYKWHMIAVIILSTIASAMSAIPAWLSKKFVDDVLIKQNKE MFLWIIGGIFAATVIKVISSYYSEITSNFVTETIKREIKIDIFSHLEKLPINYFKKNKLG DTLSKLTNDTTSLGRIGFIIFDMFKELLTVLILTGRMFQVDYILALVSLILLPLIIRVVR KYTKKIRKYGRERQDTTGKVTAFTQETLSGIFVIKAFNNTDFVIDKYKDLTKEEFEQAYK TTKIKAKVSPINEVITTFMVLLVVLYGGYQILVTKNITSGDLISFVTALGLMHQPLKRLI SKNNDLQDSLPSADRVVEIFDEKIETDVFGEAVEFDEKIENIKFENINYKYEDSNDYVLK NINLNVKAGEIVAFVGKSGSGKTTLVNLLARFFNTDEGSVTVNGVNIKNIPLGIYRNKFA IVPQETFLFGGTIKENISFGKEVTDEEIITASKMANAYNFIQEDLPNKFETEVGERGALL SGGQKQRIAIARALIKNPEIMILDEATSALDSESEKLVQDALDSLMEGRTTFVIAHRLST IVRADKIVVMDNGEIKETGTHSELIAMNGIYKNLYDIQFNENK >gi|292606573|gb|ADGG01000037.1| GENE 18 16702 - 17295 420 197 aa, chain - ## HITS:1 COG:FN0738_1 KEGG:ns NR:ns ## COG: FN0738_1 COG2849 # Protein_GI_number: 19704073 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 147 1 149 149 154 61.0 1e-37 MKKSFILFVLFILVSFSIFAERIVGTDKLEYNQKTQLYHYGNEKEPFTGIEKAYYEDKSL KYELPYKNGKFEGKAIEYYPSGKIESETFYLNGLLHGKSIEYYKNGNLKSDGNYKDGKRD GLTKTYFEDGTIRSEIYYKNGELDGLAKEYYGNGQVYIQENYKNGELDGESLNFYKNGKL KGREVYKDGKLIESSVK >gi|292606573|gb|ADGG01000037.1| GENE 19 17340 - 18383 1188 347 aa, chain - ## HITS:1 COG:FN0738_1 KEGG:ns NR:ns ## COG: FN0738_1 COG2849 # Protein_GI_number: 19704073 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 149 1 149 149 187 67.0 2e-47 MKKNFIIYTLIIFILTSFSIFAQREVNYGDLKYNEETELVYVEGEKEAFTGIAKDYYEDK SLKAEVPYVNGLIEGFGKQYYPGGKLKSEANFVKGLFQGRVTGYYENGNLKYEENYKDDE LDGLVKNYYESGQLKTELNYKNGKLDGLARAYHENGQLHIEENYKDGKLEGESTNYDENG NLTSKAIYKDDEMVEKLFGDSEEDVPSKKNIKLKGYTGPIILCGLIGLYVFLTAFKMLKS FPKTSHLTDEQRSRIFKILMKHDEGNKELFSSYTLNGIGSSYYRVASMMVDNEKVYIYAK MLSFIYLPTPITFGYLFGYSKDHILASYSNATFKEIKKEIEDTVLHI >gi|292606573|gb|ADGG01000037.1| GENE 20 18396 - 19712 1822 438 aa, chain - ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 4 436 5 437 437 399 48.0 1e-111 MLKVAKFGGSSVASAEQFKKVKEIVKMDSSRKFVVVSAVGKANKDDNKITDLLYLCYAHI KYNMNCDAIFSIIEKKFCDIAKELNLQFDIKGELAQLKEKLDQKSVSEEYLVSRGEYLTA LLMAEYLGYKFIDAKDVIFYNYDNTFDYIKSEEAFQEITKTGENFIIPGFYGSFPNKDVK LMTRGGGDVTGAIVASLANADVYENWTDVSGVLMADPRIIPNPLPIEVINYNELRELSYM GASVLHEEAVFPVALKKIPIQIRNTNRPEDVGTIINNSDEGAFKHVITGIAGKKDFSIIT IRKVRMSNEVGLIRKALSVFEDYNVSIEHIPSGVDSFSVVVETKAVKPFVHELMGRLKKV TSAGEVTLTTEISLIATVGLGMKNYKGLSGRLFSAIGKAGINIVVISQTSDEINIIVGVH NSDYERTIRTIYYEFNPQ >gi|292606573|gb|ADGG01000037.1| GENE 21 19712 - 20842 1628 376 aa, chain - ## HITS:1 COG:sll0455 KEGG:ns NR:ns ## COG: sll0455 COG0460 # Protein_GI_number: 16331527 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Synechocystis # 1 302 3 323 433 214 38.0 2e-55 MRIAILGFGTVGSGVYEIAKALKNIEVKKVLEKDLSKIDIATDNYDEIINDKEIELVVEC MGGLHPAYEFIMQALKSKKSVVSANKAVIAKYLDEFLEAAKENNVEFRFEASVGGGIPCL AGIQKIRRVENIDKFYGIFNGTSNFILDNMYRFENEFFTTLKTAQELGYAEADPSADIDG YDVTNKVIISSALAYDGFIKNEFPCFTMRNITKEDILYFKKNGLIAKYIGEATTVGNEYE ASVMLNLFPTNALEGNVLSNYNIVTIQSHTMGEVKFYGQGAGKLPTANAIIQDILDIQAN ISFNPISIEKKYSYSAKLFKHRYVLRSNEELKGEFDKIEKDGNNFYHYTKEITQADLLKV IEGKDCLVTKLSEVLA >gi|292606573|gb|ADGG01000037.1| GENE 22 20935 - 22392 1902 485 aa, chain + ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 3 477 6 490 496 468 52.0 1e-131 MNYRSTRNNTITKKDKIALLQGLSEDGGLFVLENFNEKKIDLKNLLDKSYTDIAFEVLKL FFSFDESKLKSVIEKAYSKFSTTKVTPLVELKDAHVLELFHGPTSAFKDVALTLLPYLIQ LALEGSDQEILILTATSGDTGKAALEGFKDIEQTEIIVFYPKNGVSKIQELQMRTQEGKN TKVCAIEGNFDDAQTAVKNIFLDEDLQKKLGNKKFSSANSINIGRLTPQIVYYIVAYIDL VKNNKINLGDKINFVVPTGNFGDILAGYYAKKLGLPVNKLVCASNKNNVLYDFLTTGIYD RNREFLKTISPSMDILISSNLERLLYDLSGSDDKYIKSLMDELKQNGKYQVNADILAKLK AEFGSGYASDEETSQVIKKVWEEEKYLLDPHTAVAYKVMLEQNLEGETVVLSTASPYKFC TSVANAVLNITDEDEFKLMEKLHEFTKVPVPENLKNLNSKEIRHSDLVKREDMAKYILEA DKCSK >gi|292606573|gb|ADGG01000037.1| GENE 23 22380 - 23264 1191 294 aa, chain + ## HITS:1 COG:CAC1235 KEGG:ns NR:ns ## COG: CAC1235 COG0083 # Protein_GI_number: 15894518 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Clostridium acetobutylicum # 1 286 1 292 296 193 38.0 4e-49 MFEVKVPMTSANVACGFDTLGLALQTHSIFHFELNDKLDFVGFEKEFCNEDNLVYIAFKK TLNFLNKSVNGVKISLIEQAPIARGLGSSATCVVAGIFGAYLLTGTEINKNDILKIATEL EGHPDNVAPAIFGNLCASCLVDDEAISVQYNVDERFNFMALIPNFETKTADARKALPKDL PLKDAIFSLSRLGIVLRAFETYDIQTLKKVLADKIHEPYRKNLIHEYDEVRSICESIESY GFFISGSGSTLINILVDETKLELIKEQLKNLKYNWKVLFTKVDKEGTTWKERNV >gi|292606573|gb|ADGG01000037.1| GENE 24 23266 - 24336 1526 356 aa, chain + ## HITS:1 COG:CAC0568 KEGG:ns NR:ns ## COG: CAC0568 COG0136 # Protein_GI_number: 15893858 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 17 355 18 358 359 422 60.0 1e-118 MERTKIAVVGATGMVGQRLLVLLENHPYFEVVKLAASKNSAGKRYGDLMANKWKLDMKIP EYTKDFIVEDAMDVKNVANGVKLIFCAVNLDKKELVALEEAYAKEEVVVVSNNSANRMKA DVPMIIPEINAKHLDIVDVQRKRLGTKKGFIVVKPNCSIQSYVPVFAAIKEFGIKEASIC TYQAISGSGKTFEDWPEMVENIIPYIGGEEEKSEIEPLKIFGNIENGEIKLNDTMKFSAQ CIRVPVLDGHLACVSFNLENNPGKEALIEKIKNFKSDITDLPLAPKEFIHYYEENDRPQP LLDRDNEKGMQITVGRLREDNLFDYKFVGLSHNTLRGAAGGAVLTAELVKKLGYLD >gi|292606573|gb|ADGG01000037.1| GENE 25 24655 - 25380 837 241 aa, chain - ## HITS:1 COG:TM0742 KEGG:ns NR:ns ## COG: TM0742 COG0639 # Protein_GI_number: 15643505 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Thermotoga maritima # 24 241 3 203 209 89 29.0 8e-18 MEKGTIIRKGQVKYINEDDYKRIFVISDLHGYYNLFLKFLEKVNLQKDDLLINLGDSCDR GTQSYELYVKCNEMIKEGYNVLHLLGNHEDMLLTAVNTLDESSIDHWYRNNGETTIESFK NVTGLTKEDFYDKEKNKFLVDFLSTFPTLIVSDKTIFAHAAYNPDLSPEEQEEYFLIWNR QNFWDRNITGKTIYFGHTPSKKEDHTIVYYSNNCACIDLGTYKYQKMVGVEIKSKEEYYI D >gi|292606573|gb|ADGG01000037.1| GENE 26 25436 - 27262 2269 608 aa, chain - ## HITS:1 COG:BH3636 KEGG:ns NR:ns ## COG: BH3636 COG0747 # Protein_GI_number: 15616198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 23 603 40 607 610 362 34.0 1e-99 MNGKLKKLISLFAGMMLLVSCGDVNGGKADAAKQDVNLNEIEQKYPAAYKNEGEVVPVDT LKVAVVSSSPYKGIFNGFLYSSSIDNDFMQYTMNGAFPTNPDFTLVLDSDETPIKVTVNP EEKTVTYKINPNFKWSNGDSVTTKDIVKTYEIFANQKYIESSSSSRFNKNRKKIVGIQEY NEGKADKIAGLEVIDDSTMKIHLTEITPSVYWGGNFVGEFINAKQFEGVPMDKIIESPAL RKSPLSYGPYYIKDIVQGEKVIFEANPYYYKGEPKIKTIEMEILPSSQQVAAIKSGKYDI VFNPELNIFPEIEKLDNINILARKAMYFSYLGFHVGKWDAEKNEVVTDTNSKMYDINLRK AMAYAIDNDSIAKQFYHGLAMRAPSPIAPIFTQLRNPEVEGFKIDLEKAKKLLEDAGYKD VDGDGIREGKDGKPFKINLAMMSGSEIQEPLSQYYIQQWKSIGLNVELVDGRLLDFNNFY DRLKADDPAIDCFFAAFGYGTDPQQMSLFGKNSQFNKARYTSETFEKALEAQISPEALDE AKRIEIYHNYDKIFMEELPVAPQLNKMEYIVVNKRVKEYDWKYDTDMKGFDWSKIEVTAK EPVSDSKN >gi|292606573|gb|ADGG01000037.1| GENE 27 27291 - 29120 2583 609 aa, chain - ## HITS:1 COG:BH3636 KEGG:ns NR:ns ## COG: BH3636 COG0747 # Protein_GI_number: 15616198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 63 575 81 583 610 357 38.0 4e-98 MKFKKALALISGMLLLASCGGINDGGAKDAKKEAVDVSTVESQYPSYVENEGTPVEATVL KVAVVSDSPFRGIFNGFLYSDSLDGSFMASTMNGAFPIDPDLKIILDSDETPIKVSVNPE EKTVTYKINPNFKWSNGETVTTKDIVKTYEIMANQEYITSSKSLRYNKNRKAIVGIEEYN EGKADKISGLEVIDDSTMKIHLKDMTPSVYWGGNFVPEFVNAKQFEGIPMDKITESDALR KNPLSYGPYVIKEIVQGEKVIFEANPYYYKGEPKIKRLEMEILPPSQQVAAIKSGKYDIV LKVSPEIFPELEKLDNINILTKKAGSMNYIAFKLGKWDDEKNEVVTDPNSKMYDLNLRKA IAYAIDMDAVSKQFYHGLSTPAKSQISPLFPSLHNPEINGFKQDVEKAKQLLDEAGFKDV DGDGIREGKDGKPVKYTLAMMSGGEIAEPLAQYYMQQWRAIGLDVELLDGRLLDSKNFYN RVNGDDPAIDFCIAGIGFGTDPQQLAIFGKNAKFNISRYISDELEAALDATVSKEAMNEE YRVKAYKDYEKLFMEEIPAVPILNKLDILVVNKRIKKYDWRPNVDGKPNTFKWSMIEVVA PQPIVDSKN >gi|292606573|gb|ADGG01000037.1| GENE 28 29163 - 31001 2461 612 aa, chain - ## HITS:1 COG:BH3636 KEGG:ns NR:ns ## COG: BH3636 COG0747 # Protein_GI_number: 15616198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 62 610 77 610 610 391 39.0 1e-108 MKTKWLKVFGLFTGLLLLASCGDVNGGSKDAGKEKELVDVSAIEKKYPSYFKSDAEAVQV DTLKVAIVSDSPFKGIFNGFLYSDHIDNRFMKYTMNGAFPIDDDLKLILDSDETPIKVTI NPEEKTVTYKINPNFKWSNGDPVTTKDIVKTYEIFANQDYIVSSKSLRFSKNRKAIVGIE EYNEGKADKISGLEVIDDSTMKIHLKEVTPSTYWGGNFAGELINAKQFEGIPMDKIAESD ALRKNPLSYGPYYIKEIVQGEKVVFEANPYYYKGEPKIKRIEMEVLPSSQQVAAMKAGKY DIIFGASNDVFPEVEKLDNINIVTKKASYMNYIAFKLGKWDAEKNEVVTNPNSKMYDINL RKAMAYAIDNDAIGEQFHHGLATTAKSQLSPLFPSLHDPSINGYRIDIEKAKQLLDEAGY KDVDGDGIREGKDGKPIKFTFAMMSGGDIAEPLSQYYLQQWKSIGLNVELVDGRLLDINN FYDRVEADDPAIDFCLAAIGFGSDPQQVSLFGKTAGFNISRYTSETLDKALANTVSPEAI DDQKRAEFYKEYERVFMDEIPVVPQLNKYEYLVVNKRVKMFDWTESMRAFGEEFDWSKLE VTAKDPLAAETK >gi|292606573|gb|ADGG01000037.1| GENE 29 31038 - 31940 1052 300 aa, chain - ## HITS:1 COG:BH3637 KEGG:ns NR:ns ## COG: BH3637 COG1173 # Protein_GI_number: 15616199 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 6 300 11 302 302 292 51.0 6e-79 MEKNIKNPVKTENPTGFSVIVREFKKDKIALFSFFAVTIFIIAVFVASMFINLQQLQTVD IFRKYETPSFNNFWNFFGRDSGGRSVMGYVIVGARNSITIGVIITIVTTFIGLFVGLCMG YYGGKIDAWGMRIVDFISIMPSVMIIIVFVSIVPKYGIFQFILIFSMFYWTRTTRLARSK TLSETRRDYVNASKTMGTSDLKIMFSEILPNISSIIIVNGTLALASNIGIEVALSFLGFG LPAATPSLGTLISYASKPEIIQYKAYVWLPAALVLLFMMLGINYIGQALRRAADAKQRLG >gi|292606573|gb|ADGG01000037.1| GENE 30 31953 - 32915 1296 320 aa, chain - ## HITS:1 COG:BH3638 KEGG:ns NR:ns ## COG: BH3638 COG0601 # Protein_GI_number: 15616200 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 1 320 1 322 322 328 49.0 6e-90 MWKTILRRVLLMIPQLFVLSLLIFILAKLMPGDALSGMIDPTVDAETIEKIRLQLGYYDP WYIQYFRWIKNAFHGDLGISYTYKLPVLTVIGARAMNSFSLSILALIIMYCIALPVGIFA GKNQGSKFDKGVILFNFFTYAIPSFVMYLFAILLFGYKLKWFPTIGSVDAGLIKGTFAYY MSRLHHMILPAMCIAILSTTGTIQYLRNEVIDAKTADYVKTARSKGVPMRKVYTKHIFRN SLLPIAAFFGFQISGLLGGAVIAESIFNYQGMGKFFIESILTRDYSVVTTLILLYGLLFL LGSLLSDITMAIVDPRIRIE >gi|292606573|gb|ADGG01000037.1| GENE 31 32940 - 33875 720 311 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 267 11 275 329 281 51 9e-75 MSLLEIKNLKVHYPIRGGFFNKVVDHVYAVDGVSMVIEQGKTYGLIGESGSGKSTIGKTI IGLEKATAGEILYNGKNILDPKVRKELKFNSEVQMIFQDSMSSLNPKKRVLDILAEPIRN FEKLSKEAEKEKIYELLEIVGMPQDSIYKYPHEFSGGQRQRLGIARAIACKPKLIIADEP VSALDLSVQAQVLNYLKNIQRELNLSYIFISHDLGVVRHMCDYIYIMHRGKFTETGTRED IYKDARHIYTKRLIASIPQINPEAREELKQRRENVEKEYEKLYSQFYDENGKVYNLEKIS ETHSVASSTKI >gi|292606573|gb|ADGG01000037.1| GENE 32 33872 - 34879 627 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 17 325 28 328 329 246 43 5e-64 MENKPILCEMKNLCTAFRIKDDYFNAVENVNLSLYQNEVLAIVGESGCGKSTLATTIMGL HNFNFTKVSGEVIFEGKNILNSTEDEYNKIRGGKIGMIFQDPLSALNPLQRIGQQIEEGL IYHTKLNAEQRKERAFELLKRVGIEKPERIYKQFPHQLSGGMRQRVVIAIALSCKPKILI ADEPTTALDVTIQAQILDLIADLQEEIKAGIILITHDLGVVAQIADRVAVMYAGEIVELA TSKEIFTNPLHPYTRSLLKSIPQLDTNENDELHVIKGMVPSLKNLPREGCRFSARIPYIP KEAHEEHPEFHEAFPGHFVRCTCWKTFKFQEEDKK >gi|292606573|gb|ADGG01000037.1| GENE 33 35334 - 37013 2113 559 aa, chain + ## HITS:1 COG:FN1145 KEGG:ns NR:ns ## COG: FN1145 COG1164 # Protein_GI_number: 19704480 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 1 559 1 559 559 936 87.0 0 MKFNDIPYQRPNMEEVKKYFKDLTKNLEVANSGAEQIKLIEEFANFKKDLNTTRELANAR HSIDTSDKFYEAEMDFFDENDPIIATLNTEVSRAIFNSKFRTELEERFGKHYFKLLECKL VLNEKAIPFMQKENALSTKYDKIIANSKIKFRGKEYTVSQMPPLLQNPDREFRKEAYQAR AKFFEEHQEEFDSIYDEMVKVRTEMAKALGYENYVELQYKLLNRTDYDHNDVARYREKVL KTLTPLAVKIKKLQAERLGIKDFKYYDEACDFKDGNSNPNGDVDFIVKNAQKMYRELSPE TGKFFDFMVENELMDLVTKPKKRVGGFCTSFDKYKEPFIFSNFNGTNGDIDVITHEAGHA FQCYMSQYQLLPDYIWPTYDAAEIHSMSMEFLTWPWMELFFGENANKYRYSALKGALTFI PYGVTIDHFQHYVYENPNATPEERRKKYHELELMYKPDLDYDNDFYNSGAFWFAQGHVFW APFYYIDYTLAQVCAFQYLLKYLENKEETLKEYITLCKAGGSESFFKLLDIGNLKNPMTT DVLEEIAPKLEELLNSIKI >gi|292606573|gb|ADGG01000037.1| GENE 34 37137 - 38720 1588 527 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782894|ref|ZP_06748220.1| ## NR: gi|294782894|ref|ZP_06748220.1| hypothetical protein HMPREF0400_00875 [Fusobacterium sp. 1_1_41FAA] # 1 527 1 527 527 978 100.0 0 MKFNKENLKWYGTTVGTLNINICDLNNGGKIIIVRDPKILDLDIRSKFWVSSYDKAQGVP HLMEHCLFSNVIDGKSIFKCQDELTRLGITLNAQTSYKDITLVANTASCMSVDKYPDDNI YSLLCSNYEYKILLKRLGDIHYNLVTTDVSSEYLEQEKGVIYGEMQNRYPGDAQSIRKIA EWSTLTGTKYSTIGNEFYLKNMTTDYINYMRLRTFLFENIKTIVISAPEFVNIDDILDIY VARLWEGLDINYKTINKDINKFSKEAIEFVDTYASPRFEPDQNSFLVRSIQAKYDNEHEE SSYIYKVKSEKNSAIIKDVIINLPTIKINLDMLIENTAKTIAQIYIQSKLNEYYREKYPV TYGVSRYHNIWRYDRENYNTTSFIIELSADASSEKFMDSLVEFKKWVYNPEEVDNTIRSW DVTCKNNWYSFMNGEINQMNPLDSFDDINSIVLGTLTETAEDKINMLNQYSVEKNKLFPK ALVDKFNYINNKKELIHKYVKTYIANWKVNIFDSTNLIEEDKDNKEF >gi|292606573|gb|ADGG01000037.1| GENE 35 38710 - 38862 58 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782895|ref|ZP_06748221.1| ## NR: gi|294782895|ref|ZP_06748221.1| hypothetical protein HMPREF0400_00876 [Fusobacterium sp. 1_1_41FAA] # 1 50 1 50 50 75 100.0 1e-12 MYFVINKNLKGYIYDVEYYLNGDDFIKVMIEDLLQVEMKFIAKEWLKNEI >gi|292606573|gb|ADGG01000037.1| GENE 36 38933 - 40954 3017 673 aa, chain - ## HITS:1 COG:FN0792 KEGG:ns NR:ns ## COG: FN0792 COG2987 # Protein_GI_number: 19704127 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Fusobacterium nucleatum # 1 673 1 673 673 1393 97.0 0 MLNNKTIYDAMTIKLTAEDIPMEIPKLDPSIRRAPKRIVKLSDHDIELALRNALRYIPEE FHEMLAPEFLQELEERGRIYGYRFRPEGNLYGKPIDEYEGKCTEAKAMQVMIDNNLDFDI ALYPYELVTYGETGQVCQNWMQYRLIMKYLQNMTQDQTLVVASGHPTGLFRSNPYAPRAI ITNGLMIGLFDNYEDWARGAAIGVANYGQMTAGGWMYIGPQGIVHGTYSTILNAGRLFCG VPADGDLSGKLFITSGLGGMSGAQGKACEIAKGVAIVAEVDLSRINTRLEQGWVNVIAKT PEEAFKIAEEKMASKTPYAIAYHGNIVEILEYAIEHNKHIDLLSDQTSCHAVYDGGYCPV GTSFEERTKLLGTDRPKFRELVNEGLKRHYKAIKTLHDRGVYFFDYGNSFLKSIYDVGIT EISKNGKDDKEGFIFPSYVEDILGPELFDYGYGPFRWVCLSRKKEDLLKTDKAALELVDP NRRYQDRDNYVWIQDADKNGLVVGTQARIFYQDAMSRTRIALKFNEMVRNGEIGPVMLGR DHHDVSGTDSPFRETSNIKDGSNIMADMATQCFAGNAARGMTMIALHNGGGVGIGKSING GFGMVLDGSKRVDEILWQAMPWDVMGGVARRAWARNPHSIETVVEYNLDNKGTDHITLPY IVSDELVKKVLKK >gi|292606573|gb|ADGG01000037.1| GENE 37 40981 - 42531 2428 516 aa, chain - ## HITS:1 COG:FN0791 KEGG:ns NR:ns ## COG: FN0791 COG2986 # Protein_GI_number: 19704126 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Fusobacterium nucleatum # 1 516 1 516 516 924 91.0 0 MEVFILEIVLGSKRITLEDLINVTRRGYKVKISDEAYEKIDKARALVDKYVDEARVSYGI TTGFGKFAEVSISKEQTGELQRNIVMSHSCSVGNPMPIDIARGVVFLRAVNLAKGHSGAR RIVVEKLVELLNKDVTPWIPEKGSVGSSGDLSPLAHMSLVLIGLGKAYYKGELLEGKEAL ERAGIEPIPALSSKEGLALTNGTQALTSTGAHVLYDAINLSKHLDIAASLTMEGLHGIVD AYDPRISEVRGHLGQINTAKNMRNILAGSKNVTKQGVERVQDSYVLRCIPQIHGASKDTL EYVKQKVEIELNAVTDNPLIFVETDEVISGGNFHGQPMALPFDFLGIALAEMANVSERRI EKMVNPAINHGLPAFLVEKGGLNSGFMIVQYSAAALVSENKVLAHPASVDSIPTSANQED HVSMGSIAAKKSKDILENVRKVIGMELITACQAIDLKGAKDKLSPATKVVYDEVRKVIPY VAEDRPMYIDIHAAEEIVRNNKLVEDVEKAIGQLEF >gi|292606573|gb|ADGG01000037.1| GENE 38 42813 - 43931 851 372 aa, chain + ## HITS:1 COG:FN0790 KEGG:ns NR:ns ## COG: FN0790 COG1940 # Protein_GI_number: 19704125 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Fusobacterium nucleatum # 1 372 16 387 387 571 81.0 1e-163 MYQKEIKQGNENIIFHSIYFTEDSFSIPDLTKVTNMTFPTVKRVVNEFLEKNIIVEWTLS TGCVGRRAVKYKYNPDFCYSIGVSINEEKIKFVLINTIGKIFQSKIIDTQNENFINFLTK NLKSFIKEIDEKYLVKVIGVGISIPGIYNKEDHFLEFNNTDRYEANIIKEMEKDVTLPIW VENEANMSILAEAIINKYKDLEDFTVINISNKVTCSTFHKFGNKSEDYFFKASRVHHMIV DYENQKKVGDCISFKVLKNEILEAFPKINSLEDFFSNKAYRESKKGKEILNRYLTYMGII LKNLLFTYNPKKLIICGDLSQFGSYLLDDILNIVYEKSHIFYRGKETIIFSDFKGNSSII GAALFPIVDNLM >gi|292606573|gb|ADGG01000037.1| GENE 39 43949 - 44794 825 281 aa, chain + ## HITS:1 COG:FN0789 KEGG:ns NR:ns ## COG: FN0789 COG1284 # Protein_GI_number: 19704124 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 278 1 278 280 341 76.0 1e-93 MSNKYLQFIKEYIIVALACIVMAFNTNYFFVGNKLAQGGVSGLSLIIHYLSNIDVSYLYF ALNIPLIILAYIFLGKNFLLKTLFATFVLSVFLKVFASFSEPLDDILLAAIFGGAINGIA IGIVFYAGGSTGGMDIIAKIVNKYTGIPISRILLATDFIVLSMVAVIFGKVIFMYTLISL VISSKMIDIIQVGIYSAKGVTIITTKEDEIRKRIMEETKRGITLINAKGGYTQKEIGMLY CVVGQYQLIRVKTIVKEVDPSAFMIVADVHEVIGNGFLVNK >gi|292606573|gb|ADGG01000037.1| GENE 40 44813 - 45232 474 139 aa, chain + ## HITS:1 COG:no KEGG:FN0788 NR:ns ## KEGG: FN0788 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 139 1 139 139 214 80.0 8e-55 MNNNEFINKYTDGHCLSYLEFQVVAKKYGIYFEKINNDIIVCYDGNEDPKVAAFKFYKTF FPETTLTPSDFDLIIHLNNFHMKFLRDKINEISQKYGMPPVYKTSMSIRENVLSLLNTLK TRYAIYREDMEFIKYSLNL >gi|292606573|gb|ADGG01000037.1| GENE 41 45291 - 46466 1878 391 aa, chain - ## HITS:1 COG:FN0785 KEGG:ns NR:ns ## COG: FN0785 COG2025 # Protein_GI_number: 19704120 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Fusobacterium nucleatum # 1 391 1 391 391 660 90.0 0 MNLNDYKGILVYAEQRDGVLQNVGLELLGKATELAYEINKQIALKDAGDELAEYASKQAA AIKSIDAVAATLEEEDEKVKEKVAEVKANNPDAAKVTALLIGHNVKALADELVKAGADKV LVVDQPKLEVYDTEAYTQVLTAAINAEKPEIVLFGATTLGRDLAPRVSSRIATGLTADCT KLELLKDKERQLGMTRPAFGGNLMATIVSPDHRPQMATVRPGVMKKLPKSDDRKGEIVDF PVTLDEAKMKVKLLNVVKEGGNKVDISEAKILVSGGRGVGAKQNFELLEDLAAEIGGIVS SSRAQVDAGNMPHDRQVGQTGKTVRPEVYFACGISGAIQHVAGMEESEFIIAINKDRFAP IFSVADLGIVGDLHKILPILTEEIKKYKANK >gi|292606573|gb|ADGG01000037.1| GENE 42 46486 - 47274 1268 262 aa, chain - ## HITS:1 COG:FN0784 KEGG:ns NR:ns ## COG: FN0784 COG2086 # Protein_GI_number: 19704119 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Fusobacterium nucleatum # 1 262 1 262 262 475 97.0 1e-134 MRIVVCIKQVPDTTEVKIDPVKGTIIRDGVPSIMNPDDKGGLEEALKLKDLHGAEVIVIT MGPPQAEAILREAYAMGADRAILITDRKFGGADTLATSNTIAAAIRKIENVDLIVAGRQA IDGDTAQVGPQIAEHLDLPQVSYVKEMEYKEDSKSFVIKRATEDGYFLLELPTPGLVTVL AEANQPRYMNVGAIVDVFERPIETWTFDDIEIDPAKIGLAGSPTKVNKSFTKGVKEPGVL HEVDPKEAANIILEKLKEKFII >gi|292606573|gb|ADGG01000037.1| GENE 43 47298 - 48443 1801 381 aa, chain - ## HITS:1 COG:FN0783 KEGG:ns NR:ns ## COG: FN0783 COG1960 # Protein_GI_number: 19704118 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 381 1 381 381 730 98.0 0 MEFNVPKTHELFRQMIREFVEKEVKPIAAEVDENERFPMETVEKMAKIGIMGIPIPKQYG GAGGDNLMYAMAVEELSKACGTTGVIVSAHTSLGTWPILKFGNEKQKQKYLPKMASGEWI GAFGLTEPNAGTDAAGQQTMAVQDPETGEWILNGAKIFITNAGYAHVYVVFAMTDKSKGL KGISAFIVESGTPGFSIGKKEMKLGIRGSATCELIFENCRIPKENLLGDKGKGFKIAMMT LDGGRIGIASQALGIAAGALDEAINYAKERKQFGRSLAQFQNTQFQIANLDVKVEAARLL VYKAAWRESNNLPYSLDAARAKLFAAETAMEVTTKAVQIFGGYGYTREYPVERMMRDAKI TEIYEGTSEVQRMVIAANIIK >gi|292606573|gb|ADGG01000037.1| GENE 44 48647 - 49378 606 243 aa, chain + ## HITS:1 COG:FN0782 KEGG:ns NR:ns ## COG: FN0782 COG4123 # Protein_GI_number: 19704117 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 1 243 1 243 243 344 85.0 1e-94 MNKKLESLIPLLNKNLKIIQRSDYFNFSIDSLLISEFVNLTKNTKKILDIGTGNAVIPLF LSKRTSAKIYGVEIQEISYQLALRNININNLNEQIYIIYDNIKNYLKYFTIGSFDIVLSN PPFFKVTENKELLNDLEQLSIARHEIELNLDELIEISSKLVKDRGYFYLVHRADRLSEIL VTLQKYNFEAKKIKFCYTTKQKNAKIVLIEAIKNGKVGLTILPPLVINKDNGEYTDEVLK MFE >gi|292606573|gb|ADGG01000037.1| GENE 45 49390 - 50148 703 252 aa, chain + ## HITS:1 COG:FN0781 KEGG:ns NR:ns ## COG: FN0781 COG2966 # Protein_GI_number: 19704116 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 252 5 256 256 387 83.0 1e-108 MQNDAFIIKVLSTANTIGKILLTSGAETYRVEEAITLVCRRFDLKSESFVTMTCVLTSAK KKDGEVITEVNRIYSVSNNLNKIDRIHKILLDIHKYEIDDLEKEIKKLQIQTVYKKKVLL ISYCFSAAFFSLLFDGKFRDFLVAGVGGVLIFYMAYFANKLKLNNFFINTLGGFLVTIFS SFATKLGIVSTPSYSAIGTLMLLVPGLALTNAIRDLINGDLLAGTSRSIEAALVGSALAI GTGFALFTMSYF >gi|292606573|gb|ADGG01000037.1| GENE 46 50166 - 50657 489 163 aa, chain + ## HITS:1 COG:FN0780 KEGG:ns NR:ns ## COG: FN0780 COG3610 # Protein_GI_number: 19704115 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 163 1 163 163 215 82.0 3e-56 MNYIEVFAAAFSTLFFGIIFNLTGRKLIYSSFAGGLGWYTYLLLYKEMGYSKTAAYLFSA IIITVFSEIIGRLKRTTVTTTLIPALIPLVPGGGIYYTMSFFVENKFPEALEKGRETIFL TVALSVGIFLVSTFSQILDRTIKYTKVLKKYRKFKQYKKSHKI >gi|292606573|gb|ADGG01000037.1| GENE 47 50676 - 51560 1174 294 aa, chain + ## HITS:1 COG:FN0779 KEGG:ns NR:ns ## COG: FN0779 COG0523 # Protein_GI_number: 19704114 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Fusobacterium nucleatum # 1 294 1 294 294 436 79.0 1e-122 MKILLISGFLGAGKTTFIKEMVKNINLEFVVLENEYADIGVDKDFLDEKNLDVWEMSEGC ICCSMKGDFKSSIKRIYSEINPEYLLIEPTGLGMLSSIIENIKELNNEDIEILRPISLID VTSFDEYLESFNNFFLDNLNNTGKVILTKLESIEPLEIENIKNRILELNANLKIETNDYR NFSKEWFAELLNRNLENKVIDKNFSMGTHINLRTFSKENINLKTMDELGLLLNRLVNGDF GKVYRAKGIIKVDGYWGKFNLVYKNFEMEAIEKAEVTKIVVIGNNLDIENLKNI >gi|292606573|gb|ADGG01000037.1| GENE 48 51571 - 52287 759 238 aa, chain + ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 237 1 237 412 311 83.0 1e-84 MEKENILFELIKNIQEDKLIKIVFSDRQSGDFNKVIIKPIILKSAKNIQIESFKDNKAFH KNIDLNNLQELEDSLKEYIDNFKQILLQIEGSDISFIRKKESFSKKEKESNLIKTSNEHN KKKQYILNEGDKIDFLIELGLMSVEGKILKSSFNKFKQINKYLEFIDDVIEELKAKKLIT NHINVLDFGCGKSYLTFALYYYLKNYRKDLTFSIVGLDLKKDVIEFCNKLAKKLNYEI >gi|292606573|gb|ADGG01000037.1| GENE 49 52332 - 52796 368 154 aa, chain + ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 154 255 412 412 244 86.0 6e-65 MDLVFSLHACNNATDYSLEKALSLDAKAILAVPCCHHEFFEKIQKNKNSEFYNTLKIMAD NGVVLDKFATLATDSFRSLSLELCGYKTKMIEFIDMEHTPKNILIKAIKSKSSNLKEKLV EYNKLKEFLGIKPLLEDLIKKYFLIDTNTEIPYN >gi|292606573|gb|ADGG01000037.1| GENE 50 52824 - 54626 2299 600 aa, chain + ## HITS:1 COG:FN0777 KEGG:ns NR:ns ## COG: FN0777 COG0481 # Protein_GI_number: 19704112 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Fusobacterium nucleatum # 1 600 5 604 604 1124 96.0 0 MLQKNKRNFSIIAHIDHGKSTIADRLLEYTGTVSERDMKDQILDSMDLEREKGITIKAQA VTLFYKAKDGEEYELNLIDTPGHVDFIYEVSRSLAACEGALLVVDAAQGVEAQTLANVYL AIENNLEILPIINKIDLPAAEPEKVKREIEDIIGLPADDAVLASAKNGIGIENILEAIVQ RIPAPNYDENAPLKALIFDSFFDDYRGVITYIKVLDGSIKKGDKIKIWSTEKELEVLEAG IFSPTMKSTDTLTSGSVGYIITGVKTIHDTRVGDTITTVKNPALFPLAGFKPAQSMVFAG VYPLFTDDYEELREALEKLQLNDASLTFVPETSIALGFGFRCGFLGLLHMEIIVERLRRE YNIDLISTTPSVEYKVRIDNQEERIIDNPCEFPEPGRGKITIQEPYIRGKVIVPKEYVGN VMELCQEKRGIFLSMDYLDETRSMLSYELPLAEIVIDFYDKLKSRTKGYASFEYELSEYR ESNLVKVDILVSGKPVDAFSFIAHNDNAFYRGKAICQKLSEVIPRQQFEIPIQAALGSKI IARETIKAYRKNVIAKCYGGDITRKKKLLEKQKEGKKRMKSIGNVEIPQEAFVSVLKLND >gi|292606573|gb|ADGG01000037.1| GENE 51 55062 - 55937 882 291 aa, chain + ## HITS:1 COG:FN0354 KEGG:ns NR:ns ## COG: FN0354 COG0697 # Protein_GI_number: 19703696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 68 291 1 224 224 293 84.0 3e-79 MNFSQIFKKLTAKHCAFIGIFFWATAFVLTKVVLKEVDAMSLGVLRYFFASIIVIFILIK KKIPFPNLKDIPAFIFAGFSGYAGYIVLFNIATVLSSPSTLSVINALAPAITAIIAYFMF NEKIKLIGWIAMGISFCGILVLTLWNGTLTINKGVLYMLLGCLLLSTYNISQRYLTKKYS SFSVSMYSLLIGGILLVIYSPHSILNIPNISSTSLILIIYMAIFPSIISYFFWTKAFELA KSTTEVTSFMFATPVLATILGMIILGDIPKLSTIIGGVIIISGMILFNKTK >gi|292606573|gb|ADGG01000037.1| GENE 52 56067 - 57449 1971 460 aa, chain + ## HITS:1 COG:BH0900 KEGG:ns NR:ns ## COG: BH0900 COG1262 # Protein_GI_number: 15613463 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 210 457 33 284 286 154 35.0 2e-37 MKEKILNFLNEGKPLLWIKGQNFHEIENIIVEGLNAFENKRYYIYEKGTTINRQNNSVEV GMGNLFTTLDELYPQGIRKIPVFLLIKDSLAEIVDENNLEYIKEIVETKTANPKYNFTLI VVDQQNTVPEDLREITSLVDDDEQKRTAEMALKKAILDITKIEKIELDLAKLEKIELDLD SIEKIVQSLKDDIKKITVGDKAIELKPTFEDMIFVKGGKYQPSFADEEKEVSNLEVSKYL ITQKLWQELIRNNPANFKGDENRPIEYISWWHALEFCNRLSEKYGLRPVYNLGKSDQGLL MINQLDGSVVYPDVADFNKTEGFRLPTEVEWEWFARGGQVAIENGTFDYTYSGSNNIDDV AWYTGNSKDTTQSVGLKMPNVLGLYDCNGNVWEWCYDTTESIESGKSYVYKAYDHSNVYR RLKGGSWCNNTEVCAVAVRGNSQATYAYSNAGFRIVRTVL >gi|292606573|gb|ADGG01000037.1| GENE 53 57485 - 57766 316 93 aa, chain - ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 1 93 312 404 404 150 80.0 7e-37 MINKGLIRRDRIFSFSVNISDKPGELAKVVDLIAELGANVVKLEHNQFKNLSRFRDVEVQ ITVETNGTDHIQNLIETFEKKGYEIIKIKSKIN >gi|292606573|gb|ADGG01000037.1| GENE 54 57822 - 58700 1173 292 aa, chain - ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 1 285 1 285 404 442 94.0 1e-124 MAKLEDFVKAKEKLSKVLLETHLIYSPIFSKESGNEVYIKPENLQKTGSFKIRGAYNKIS NLTEEEKKRGVIASSAGNHAQGVAYGARELGIKAVIVMPKSTPLIKVESTKQYGAEVVLY GDVYDDAYKKAKELEEKESYVFVHPFNDEDVLDGQGTIALEILNELPETDIILVPIGGGG LISGIACAAKLIKPEIKIIGVEPEGAASAYEAIKENKVVELKEANTIADGTAVKRIGDLN FEYIKKYVDEIITVSDYELMEAFLLLVEKHKIIAENSGILSIAATKKLKRKK >gi|292606573|gb|ADGG01000037.1| GENE 55 58995 - 60695 1942 566 aa, chain + ## HITS:1 COG:FN1306_2 KEGG:ns NR:ns ## COG: FN1306_2 COG0500 # Protein_GI_number: 19704641 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 265 566 1 302 302 527 90.0 1e-149 MENLYFTSFDNNKLFYRKWNFEQGKKTLILIHRGHEHSERLNSLAQDKKFLKYNIFAYDL RGHGYTETKTSPNAMDYVRDLDAFVKHIKNEYQIKEEDIFIVANSIGGVILSAYVHDFAP NLAGMALLAPAFEIKLYVPFAKQLVTLLTKIKKDAKVMSYVKAKVLTHDVEEQNKYNSDK LINKEINARLLIDLANMGQRLIEDSMAIELPTIIFSAQKDYVVKNSAQKKFYLNLSSKKR EFIELENFYHGIIFEKESQTVYQMLDDFIQDVFRNQKIELDVSPREFSRKEYERIGLEEY PLSEKIYYSIQKFSMKTFGFLSKGMSLGLKYGFDSGISLDYIYKNKASGKLLIGKLIDRF YLNQVGWAGVRVRKKNLLALIEEKINSLGEENVKILDVAGGTGNYLFDIKEKYPKLEILI NEFKKSNIEVGEEVIKRNNWENISFVNYDCFDKETYKKINYKPNIVIISGVFELFEDNKM LENTISGITEILDKDAAVIYTGQPWHPQLKQIALVLNSHKGNGKSWLMRRRSEKELDSLF EKYNLKKEKMLIDNEGIFTVSLAEMR >gi|292606573|gb|ADGG01000037.1| GENE 56 60697 - 61296 438 199 aa, chain + ## HITS:1 COG:FN1307 KEGG:ns NR:ns ## COG: FN1307 COG0558 # Protein_GI_number: 19704642 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Fusobacterium nucleatum # 1 198 1 198 199 285 84.0 5e-77 MDISIYKLKTKFQNLLMPICKKLVKLKVSPNQITITTVLLNIVFAGLIYEFNNYKLIYLT VPVFLFLRMALNALDGMIANKFNQKTKMGVFYNEAGDVVSDTIFFYVFLRVIGISEIHNL LFVFLSILSEYVGVTAMMVDNKRHYEGPMGKSDRAFLISLLAIIYYFIGNQYFDYILILA IVLLIFTIFNRVRSSVKGG >gi|292606573|gb|ADGG01000037.1| GENE 57 61298 - 62104 595 268 aa, chain + ## HITS:1 COG:FN1308 KEGG:ns NR:ns ## COG: FN1308 COG4589 # Protein_GI_number: 19704643 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Fusobacterium nucleatum # 55 266 1 212 213 240 82.0 2e-63 MLVAMFFVDILALIILFLIKNKISEKKFTNIKQRIFTWFIIIILFYLATMSKIYLLLLFV LISTLAFKEFLQFAYIKYNSELMITSVAINLAFYLGIYFKNLYVLLILFILIALRFYKRA FIIFAFFITTYLIGSISYIDDLNFIINYMILIELNDVFQYISGNIFGERKITPNISPNKT VEGLIGGMILTTLTAALLKYIFHINYQIKFIPYIALIGFFGDIFISALKRKVHLKDSGTI LLGHGGILDRVDSLIFTAPIILFIFKYS >gi|292606573|gb|ADGG01000037.1| GENE 58 62172 - 62366 415 64 aa, chain + ## HITS:1 COG:no KEGG:FN1309 NR:ns ## KEGG: FN1309 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 64 1 64 64 109 100.0 3e-23 MVTGDMNIMEAVEKYPVIVEVLQRNGLGCVGCMIASGETLAEGIEAHGLDTKAILDEINS LIKE >gi|292606573|gb|ADGG01000037.1| GENE 59 62451 - 63800 886 449 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 3 443 5 440 456 345 41 5e-94 MVNLIASINSLFWGSLLILLLVGTGIFFTIRLRFVQVRKFRKGITQLTGDFDLNGKDADH NGMSSFQALATAIAAQVGTGNLAGAATAIVSGGPGAIFWMWVSAFFGMSTIYAEAILSQL FKKKVEGEVTGGPAYYIEELFNKGVLAKVLAVFFSLSCILALGFMGNGVQANSIGEAVQN AFNISPYITGAVVALLGGFVFFGGLKRIASFTEKVVPVMAGLYILICIVIIVINHANILT AFESIFVNAFSTKSILGGFLGMGVKKAIRYGVARGLFSNEAGMGSTPHAHAIAKVKNPVE QGNVALITVFIDTFVVLTLTALVILTANVGNGTLTGITLTQKSFEAALGYSGNIFIAVAL FFFAFSTIIGWYFFGEANIKYIFGKKAISIYRVLVMISIFIGSTQKVDLVWELADLFNGL MVIPNLIALLLLNKLVLETSDEYDKIHNL >gi|292606573|gb|ADGG01000037.1| GENE 60 64161 - 64742 772 193 aa, chain - ## HITS:1 COG:FN1132 KEGG:ns NR:ns ## COG: FN1132 COG1057 # Protein_GI_number: 19704467 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Fusobacterium nucleatum # 1 193 1 193 193 284 87.0 6e-77 MRIAIYGGSFNPMHIGHEKIVDYVLDNLNIDKIIIIPVGIPSHRENNLEQSDTRLKICKE IFKGNKKIEVSDIEIKSEGKSYTYDTLLKLMDLYGENNEFFEIIGEDSLKSLKTWKNYEE LLKICKFIVFRRKDDKNIQIDEEFLNNKNIIILENEYYDISSTEIRNMVKNNEDISAFVN KKVKKLIEKEYLD >gi|292606573|gb|ADGG01000037.1| GENE 61 64739 - 65512 770 257 aa, chain - ## HITS:1 COG:no KEGG:FN1131 NR:ns ## KEGG: FN1131 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 257 1 257 257 303 75.0 4e-81 MKKDVKVEFLKAKNLDTCIELIKEKGKFNILSEYANFYDRRTYFKVNENGDIFQKTYNPI TLLYLFCDDEKKLADYLFKYSYVEEKQNIKKIDRASNLDIESLKKNLMKTLTNSHLDFSK IFAKELFLRDKKAFFELMYNFSFMGNPKDLKVLFVYALEEIFNQINYDENIFYTIIAYLT KFRDDYSIYMNSTDDNIKFDIENYNEDKKIYLNVAEKIFARYNLKNENKFRLSLCRYFEN DFELNQDLKDILKGKDI >gi|292606573|gb|ADGG01000037.1| GENE 62 65518 - 66522 1147 334 aa, chain - ## HITS:1 COG:FN1130 KEGG:ns NR:ns ## COG: FN1130 COG1663 # Protein_GI_number: 19704465 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Fusobacterium nucleatum # 10 334 1 325 325 588 92.0 1e-168 MKLLSYIYLLITTIRNFLYDEKILPIRKVPDVEVICIGNVSVGGTGKTPAVHFFVKKLLA KGRKVAVVSRGYRGKRKRDPLLVSDGMVIFATAQESGDESYLHALNLKVPVIVGADRYKA CMFAKKHFDIDTIVLDDGFQHRKLYRDRDVVLIDATNPFGGGNVLPAGLLREDFRRAVRR AYEFIITKSDLVNERELRRIKNYLRKKFKKEVSVAKHGISCLCDLKGNMKPLFWVKGKKV LIFSGLANPLNFEKTVISLAPSYIERIDFKDHHNFKPKDIALVKKKAEKMDADYIITTEK DLVKLPDNLNINNLYVLKIEFTMLEDNTLKDMKG >gi|292606573|gb|ADGG01000037.1| GENE 63 66556 - 70107 4158 1183 aa, chain - ## HITS:1 COG:FN1129 KEGG:ns NR:ns ## COG: FN1129 COG1196 # Protein_GI_number: 19704464 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Fusobacterium nucleatum # 1 1183 11 1193 1193 1445 84.0 0 MYLKAVEINGFKSFGEKVYIDFNRGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE SQDVIFSGGKEKKAATKAEVSLIIDNSDRYLDFDNDIVKITRRIHITGENEYLINDSKSR LKEIGTLFLDTGIGKTAYSVIGQGKVERIINSSPKEIKNIIEEAAGIKKLQANRLEAQKN LGNIEVNLDKVEFILNETRENKNKIEKQAELAQKYIDLKDEKSSLVKGIFITELEQKKKN LVENEDIKVKSEEECSILQEKFDKTLNRLTTIDLEKEEVKKQKILIDSRNKELKDVISTK ETEQAVTRERLDNFKKDKLLKEEYSLHLENKIEKKLEEINTLIAKKEELSKNILEMEAAN KEFERKINELEAIKVEKTDLIESRNKKIRDLELEKQLSSNEIENNERKLKSSLDEVESLK KELDETTKKELANNEEKDLLNSQIEAKQEELIKTEERNEFLVNQLSEISKTINKLSQDIR EYEYQEKTSSGKLEALIRMEENNEGFFKSVKEVLNSGISGIDGVLISLIKFDDKLAKAIE AAVSGNLQDIIVEDKEVAKKCIAFLTERKLGRASFLALDTIKVSRREFKGNMPGVLGLAA DLVSAEDKYKKVVDFVFGGLLIVENIDVATDILNKNLFAGNIVTVNGELVSSRGRITGGE NQKSSINQIFERKKEIKVLEEKVSNLKSKIVEESKRREDLSIKLENYENEIDKIDSLEDS IRKKMELLKKDFENLSEKSERISKELRNIKFNIDDAEKYKTSYQDKINSSVSNIEEIEKH INSLRKDLEADELTLKETLANIDELNKQFSDTRIIFLNNKNSIEQYERDIISKENENSDL KEEKEKNSNVVMELSQNIEELEKNEEQLQKEIEEHIKIYNSENRDIEVLNERENNLSNEE RELSKDKSKLETDLLHSNDRLEKIIEVIEKIKTDIENINEKLTELTDVTAKAVEVEKLKS SKDYLRSLENKINNFGDVNLLAINEFKELKEKYDYLARERDDVVKSRKQVMDLIQEIDER IHEDFHTTYENINENFNKMCEETIRNTEGRLNIINPEDFDNCGIEIFIKFKNKKKQPLSL LSGGEKSMVAIAFIMAIFMYKPSPFTFLDEIEAALDEKNTKNLLAKLRDFTDKSQFILIT HNKETMKESDSIFGVTMNKEIGISKIVSPDKIIKILDSNKESN >gi|292606573|gb|ADGG01000037.1| GENE 64 70212 - 71567 1861 451 aa, chain - ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 1 451 1 451 451 712 85.0 0 MNKVSINNFSEIEIEILRKLNKYGKGYIVGGAIRDILLGLKPKDIDFTTNLPYETLKDLF SEYNPKETGKAFGVLRIRVNDTEYEIAKFREDKYEEKDGLKIVPEDNKVDFVDDIKEDLS RRDFSINAMAYNEVDGIVDLYNGQKDIENKVINFVGNAEERIVEDPLRILRAFRFMSRLG FSLSENTIEAIKKQKDLLKSIPEERITIEFSKLLLGENVKNTLTAMKDTGVLELIIPEFK ATYDFEQHNPHHNLDLFNHIISVVSKVPADLELRYTALLHDIAKPLVQTFDEKGIAHYKT HEIVGADMARDILTRLKLPVKLIETVEDIIKKHMVLYRDVTDKKFNKLLSEMGYDNLLRL IEHCNADNSSKNNEVVNPENDLHERLKRAVEKQMQVTVNDLALNGKDLIDMGFKGTEIGK IKGELLDKYLSEEIPNEKEVMLAYVREKYLK >gi|292606573|gb|ADGG01000037.1| GENE 65 71580 - 72938 1517 452 aa, chain - ## HITS:1 COG:FN0242 KEGG:ns NR:ns ## COG: FN0242 COG0569 # Protein_GI_number: 19703587 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 452 1 452 452 709 94.0 0 MKIVIVGAGKVGELLCRDLSLEGNDIILIEQDAKILEKILANNDIMGFVGSGVSYDAQME AEVPKADVFIAVTEKDEINIIASVIAKKLGAKYTIARVRSTDYSSQLNFMTESLGIDLVI NPELEAAKDIKQNIDFPEALNVENFLDGRLKLVEFHIDKDSILDNVSLFDFKQKFFPNLL VCIIKRGDEVIIPSGNTFIKGDDRIYITGSNSEIIKFQDALGKDRRKIKSAFIIGAGIIT HYLAEELLKDKIAVKIVEMNPKKANKFSEYLPNATIINADGSNEEILREENFQNYDSCIS ITGIDEVNMFISIYAKKIGIKKIITKLNKLSFVDILGENSFQSIITPKKIIADNIVRVVR SIANKKKNLIENFYRLENNTVEAIEILVNSDSKINNIPLKDLKIKKNLIIAYIVRNNVAI FPKGTDVINEGDRVIIITKESFFDDINNIVAE >gi|292606573|gb|ADGG01000037.1| GENE 66 72951 - 73445 651 164 aa, chain - ## HITS:1 COG:FN0241 KEGG:ns NR:ns ## COG: FN0241 COG0262 # Protein_GI_number: 19703586 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Fusobacterium nucleatum # 1 164 1 164 164 271 87.0 4e-73 MEKKYYKNLKMIVCVGKDNLIGDRTPDENSNGMLWHIKEELMYFKERTMGNTVLFGGTTA KYVPVELMRKNREVIVLHRTMDVPKLIEDLTQENKTIFVAGGYSIYKYFLDNFEIDEIFL STIKDSVEVKDTVEPLYLPNVEEYGYKVVEKKEYDEFIAYVYKK >gi|292606573|gb|ADGG01000037.1| GENE 67 73445 - 74272 1154 275 aa, chain - ## HITS:1 COG:FN0240 KEGG:ns NR:ns ## COG: FN0240 COG0207 # Protein_GI_number: 19703585 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Fusobacterium nucleatum # 1 275 1 275 275 532 93.0 1e-151 MKAKFDKIYKEIVDTIAEKGIWSEGNVRTKYADGTAAHYKSYIGYQFRLDNSGDEAHLIT SRFAPSKAAIRELYWIWILQSNNVDVLNDLGCKFWDEWKQEDGTIGKAYGYQIAQETYGQ KSQLHYVINELKKNPNSRRIMTEIWVPNELSEMALTPCVHLTQWSVIGNKLYLEVRQRSC DVALGLVANVFQYAVLHKLVALECGLEAADIIWNIHNMHIYDRHYDKLIKQVNGETFEPA KIKINNFKSIFDFKPDDVEIVDYKYGEKVNYEVAI >gi|292606573|gb|ADGG01000037.1| GENE 68 74332 - 74589 134 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237745328|ref|ZP_04575809.1| ## NR: gi|237745328|ref|ZP_04575809.1| predicted protein [Fusobacterium sp. 7_1] # 1 85 33 117 117 80 85.0 4e-14 MENSKYIKLLKILEITVIIISCISFISLKILLIFLSLIYFIVLIYDFYRKKVDIKNFIIN FIFLFVDFYVMNLAIKIASQKLPNF >gi|292606573|gb|ADGG01000037.1| GENE 69 74702 - 75085 224 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782924|ref|ZP_06748250.1| ## NR: gi|294782924|ref|ZP_06748250.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 127 1 127 127 123 100.0 3e-27 MDFLVLLFFILFFFWAILTIFEVTIISRMKVSTFKYIKLLKFLEFFYVILIIILIDFYLY INVEIFSYFYYSLSIIIYFGILTYDFWEKKITKKDFIIYFLYFFIDITLIIALLYLIMIL MSDFPSV >gi|292606573|gb|ADGG01000037.1| GENE 70 75185 - 75568 206 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782925|ref|ZP_06748251.1| ## NR: gi|294782925|ref|ZP_06748251.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 127 1 127 127 123 100.0 3e-27 MGILVFLFLKLSFFWAILTVFEVTIISRMKVSTFKYIKLSKFLEFFYVILTIISTDFYLY IRPKVFSYLIYSLLITIYFGILIYDFWKKKITKKDFIIYFIYFFINVVLVYLSLIMIFLF FGSSSYV >gi|292606573|gb|ADGG01000037.1| GENE 71 75660 - 76001 334 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782926|ref|ZP_06748252.1| ## NR: gi|294782926|ref|ZP_06748252.1| membrane-spanning protein [Fusobacterium sp. 1_1_41FAA] # 1 113 1 113 113 106 100.0 5e-22 MEELLFGGIFLVLIISGIFSFFEIAFIRIFFEIKSTKYIKLLKILEILFFLMIFFGEILF IAFTFLYFLVLFSDFKKKIISKEELIINTLFYFTDILLIILVMLLILGNLPSI >gi|292606573|gb|ADGG01000037.1| GENE 72 76017 - 76379 205 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782927|ref|ZP_06748253.1| ## NR: gi|294782927|ref|ZP_06748253.1| hypothetical protein HMPREF0400_00911 [Fusobacterium sp. 1_1_41FAA] # 1 120 1 120 120 135 100.0 7e-31 MHLFFLLVFLGLLISSIFFTMAEINFVKHFLKIENTKYIVLLRILETMTPFVTLLIASGP RAILKSVFPVFCSLCFLYLIILIIEFFRKKINMKELIVNSVLCIIDVALVTIGLVMIFGF >gi|292606573|gb|ADGG01000037.1| GENE 73 76481 - 76630 111 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKRILLPVFLFILIVFVVVETLKISVLIQNKVSKEMISTSVERNMFFK >gi|292606573|gb|ADGG01000037.1| GENE 74 76706 - 77467 909 253 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782929|ref|ZP_06748255.1| ## NR: gi|294782929|ref|ZP_06748255.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 253 1 253 253 402 100.0 1e-110 MKKIILLIILLVLPACSSLGLDDFKFNSADNISTTRIIEKYEKVKQIISVSDGKAYILTE NYDFEFSGEQAKLLKEIVSINNIIGRHKTKSPQYVIDIDLNGIVNFGLSPVYDIEKKLDG EDKPSKEFLKNQEEKAMRFRNKLKENNMKFNFTENPKEYRFYIKESAKAKGKIVKLENRD EILAKNNLEDKDLKISLNIEKKLSQKEYEEKVKEAKYEDLKDKVKFALVSPFIVAAVVTI APVLFIESLTADY >gi|292606573|gb|ADGG01000037.1| GENE 75 77486 - 78211 900 241 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782930|ref|ZP_06748256.1| ## NR: gi|294782930|ref|ZP_06748256.1| DNA/RNA non-specific endonuclease [Fusobacterium sp. 1_1_41FAA] # 1 241 1 241 241 414 100.0 1e-114 MLKKIILFVLLLILTACSSTYVSKTEVIRKKETIKLAITTPDKDIYLLGDNYDYQFVGKE ARKLQTLIEFQKMKGLTKENLTQVKKRIRISKDGNMTLSISTEFTIYKKSEVDKSNKNFE KEQEDFINDFKKKLKEKDIEYIVKEDEEGWHFDLPNAIEVSGKTVRLPNRNDILQKSSDK IINLELDLAVEYQLSDAEYQKRVSNERWRSAGEFVLGVIAAPFVIAWGILTIPVWIYAVT Q >gi|292606573|gb|ADGG01000037.1| GENE 76 78299 - 78808 519 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782931|ref|ZP_06748257.1| ## NR: gi|294782931|ref|ZP_06748257.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 169 1 169 169 278 100.0 9e-74 MREYNFKASDSTGEILMALGFSFLFMGVAEIILTLRLILFPKIKYSSYVDNTYLEKFLLV VPALIITAYIMKLIKKYAIKNYHIYEDKEILKIENDKKIIELAYTAIKDIKIDKKGNKIS KCYKLVIKTNSKDLKFFVRPKENYFGGADDNDFDNLENFYLFLKEKISK >gi|292606573|gb|ADGG01000037.1| GENE 77 78937 - 79806 1056 289 aa, chain + ## HITS:1 COG:FN1221 KEGG:ns NR:ns ## COG: FN1221 COG3878 # Protein_GI_number: 19704556 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 289 1 288 288 376 68.0 1e-104 MDFKELLTKILSEVKKDEITIFTESNEDNEILNKSKIGGKPYLPKDFVWPYYQELPLSFL AQINLEEVNSLDKDRLLPSKGMLYFFYELETEEWGFKPENKGCSKVLYFEDTSNFELTDF PEDMEDYNIVPEFKVNFKSNISYPSYENFEKLNENDVLLEKYETFEGYDELNDNFFDNYY DFYEEYMDGLESHTKLLGYPDVVQNSMEEECVEVTRDFDMEAVKASPKKYKEEIKKAAEN WILLFQMDTVETDDYELMFGDSGHIYFWIKKEDLKNKNFDNVWLILQSC >gi|292606573|gb|ADGG01000037.1| GENE 78 79947 - 80474 863 175 aa, chain - ## HITS:1 COG:FN1223 KEGG:ns NR:ns ## COG: FN1223 COG0778 # Protein_GI_number: 19704558 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 175 1 175 175 310 81.0 9e-85 MNEVLKAIKERRSIRKYKSDMLPKEIIDQVIESGLYAASGKGQQSPIIISVTNKELRDKL SRMNCEIGGWKEGFDPFFNAPVVLIVLAPRDWANKTYDGSLVMGNMMLAAHALNIGSCWI NRARQEFETEEGKEILKSLGIEGEYEGIGHCILGYVDGEYPSVPARKANRVYYVE >gi|292606573|gb|ADGG01000037.1| GENE 79 80608 - 81573 943 321 aa, chain - ## HITS:1 COG:PM0712 KEGG:ns NR:ns ## COG: PM0712 COG0679 # Protein_GI_number: 15602577 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pasteurella multocida # 1 310 7 305 319 72 24.0 1e-12 MEAFISSIGSILSIVLLIVLGYILKEKNWFSDSFSGNISKLIMNIALPASIFVSVLKYLT LKSLLSLTGALVYTFLSVIIGYIFAYILVKILNVPVGRRGTFINTVVNANTIFIGLPLNI ALFGNESLPYFLVYYVTNTVSTWAFGAILIGNDTNDKDRQGAAFNWKKLFPPPLLGFIVA LIFLFLSIPVPAFINSTLGYLGGIVTPLSLIYIGIVLHNAGLKSIKFDRDTIFALIGRFI FSPIVMLILIKFSSDILPLKELSAIEVKTFIVQSAAPALAVLPILVNEAKGDVEYATNVV TTSTLLFVIVIPIITTLLGRI >gi|292606573|gb|ADGG01000037.1| GENE 80 81598 - 83226 2098 542 aa, chain - ## HITS:1 COG:L121483 KEGG:ns NR:ns ## COG: L121483 COG0281 # Protein_GI_number: 15672882 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Lactococcus lactis # 4 542 2 540 540 716 65.0 0 MTKKSYEVLNNPFLNKGTAFTKEERKELELTGLLPPQIQTIEEQAEQVYAQYKSKEPLIN KRRFLMEIFDTNRTLFYYLFSQHVVEFMPVVYDPVIAENIENYSELYVNPQNAVYLSIDS PEAIEESLKNATKDREIRLIVVTDAEGILGIGDWGTNGVDISVGKLMVYTAAAGIDPKSV LPVVLDAGTNRETLLEDKLYLGNRHKRIYGDKYYEFVDKFVQTAEKLFPRLYLHFEDFGR SNAANVLHKYWKTYPVFNDDIQGTGIITLAGILGALKISGEKLTDQKYMCFGAGTAGAGI ADRVYQEMLQQGLSEDEARSRFYLVDKQGLLFDDMDDLTPEQRPFARKRTEFTNANELTN LEAAVKAVKPTILVGTSTQPNTFTETIVKEMASYTARPIIFPLSNPTKLAEATAENLIKW TDGKALVATGIPADPVEYNGVTYEIGQANNALIYPALGLGAIASTAKLLTNEMISKAAHS LGGIVDTTKPGAATLPPVSKLTEFSQRVAEAVGQCALDQKLNREDITDIKVAIEKIKWTP KY >gi|292606573|gb|ADGG01000037.1| GENE 81 83386 - 84087 937 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294782936|ref|ZP_06748262.1| ## NR: gi|294782936|ref|ZP_06748262.1| hypothetical protein HMPREF0400_00920 [Fusobacterium sp. 1_1_41FAA] # 1 233 17 249 249 451 100.0 1e-125 MIKKIFMCLMLVLAFTACQSLNYVKEKNETIQLVVKGNDNNIYMLGNNYDYQFSGKDADR LLRLSNFPKELNFSREQLKNASVNIHVDARDGSVGLDFGSRITINKKSGNNANYEKEQKV FYENLKNELNRRKVRYKIEENSGEWVIVLLDVPYFEGKVVKLQNRSEFLEKGKGQYINVP SKLYLTDPPSQATEGAVGGLMGVVAVPVMAVLAIPALVVLPFLVPFMKIGNTP >gi|292606573|gb|ADGG01000037.1| GENE 82 84265 - 85047 827 260 aa, chain + ## HITS:1 COG:AF0115 KEGG:ns NR:ns ## COG: AF0115 COG0388 # Protein_GI_number: 11497735 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Archaeoglobus fulgidus # 4 259 5 253 257 127 36.0 2e-29 MKKKKIKIALAQMKIEQKNIEGNCKKILKKIEEAAKENVDIICFPELATIGYTITTDELQ NLPEDFENTFIEKLQEKARLFKIHILVGYLESKTTKKSRDFYNSCIFIDDEGKILANARK VYLWKKEKTKFKAGNKFVVKNTKFGKIGILLCYDLEFPEPARIECLKGAEIIFVPSLWSF NAENRWHIDLAANSLFNLLFIAGCNAVGDSCCGKSKIVEPDGSTLIEASGTNEELLMATI DLEKVSEVRAKIPYLSDLKR >gi|292606573|gb|ADGG01000037.1| GENE 83 85112 - 85948 1174 278 aa, chain - ## HITS:1 COG:FN1224 KEGG:ns NR:ns ## COG: FN1224 COG2877 # Protein_GI_number: 19704559 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Fusobacterium nucleatum # 1 278 9 286 286 549 96.0 1e-156 MLINDVNKVKVGNIVFGGKKRFVLIAGPCVMESQELMDEVAGGIKEICDRLGIEYIFKAS FDKANRSSIHSYRGPGLEEGMKMLAKTKEKFNVPVITDVHEAWQCKEVAKVVDILQIPAF LCRQTDLLIAAAETGKAVNIKKGQFLAPWDMKNIVVKMEESGNQNIMLCERGSTFGYNNM VVDMRSLLEMRKFNYPVVFDVTHSVQKPGGLGTATSGDREYVYPLLRAGLAIGVDAIFAE VHPNPTEAKSDGPNMLYLKDLEEILKTAIEIDKIVKGV >gi|292606573|gb|ADGG01000037.1| GENE 84 85938 - 87395 1822 485 aa, chain - ## HITS:1 COG:FN1225 KEGG:ns NR:ns ## COG: FN1225 COG0769 # Protein_GI_number: 19704560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Fusobacterium nucleatum # 1 485 1 485 485 853 89.0 0 MNIFSGVEYEVLRDVDLNRKYDGIEYDSRKVKENYIFVALEGANVDGHDYIDSAVKNGAT CIIVSRKVEMKHKVSYVLIDEIRHKLGYIASNFYEWPQRKLKIIGVTGTNGKTSSTYMIE KLMGDTPITRIGTIEYKIGDEVFEAVNTTPESLDLIKIFDKTLKKKIEYVVMEVSSHSLE IGRVDVLDFDYALFTNLTQDHLDYHVTMENYFQAKRKLFLKLKDINNSVFNIDDKYGKRL YDEFIEDNPEIISYGIDGGDLEGEYLDDGYIDIKFKEKVEKVKFALLGDFNLYNTLGAVA IARKMGISWEDILERVSNIKAAPGRFEALNCGQDYKVIVDYAHTPDALVNVIVAARNIRN GNRIITIFGCGGDRDRTKRPIMAKAAENLSDIVILTSDNPRTESPEQIFADVKAGFTKTD DYLFEPDREKAIKLAINMAEKNDIILITGKGHETYHIIGTKKWHFDDKEIARREIVRRRM VENVN >gi|292606573|gb|ADGG01000037.1| GENE 85 87401 - 88078 685 225 aa, chain - ## HITS:1 COG:FN1226 KEGG:ns NR:ns ## COG: FN1226 COG0692 # Protein_GI_number: 19704561 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Fusobacterium nucleatum # 1 225 1 225 226 385 89.0 1e-107 MSKINNDWKEILEEEFQKDYFVELKNILEKEYENYTVYPPKKDILNAFFLTPYSEVKVVL LGQDPYHQKGQAHGLAFSVNYGIKTPPSLVNMYKELHDDLGLYIPNNGFLEKWAKQGVLL LNTSLTVRDSEANSHSKIGWQTFTDNVIKKLNEREKPIIFILWGNNAKAKEKFIDTSKHY ILKGAHPSPLSANRGFFGCKHFSEVNRILKELKEKEIDWQIENKE >gi|292606573|gb|ADGG01000037.1| GENE 86 88091 - 88762 962 223 aa, chain - ## HITS:1 COG:no KEGG:BCB4264_A2363 NR:ns ## KEGG: BCB4264_A2363 # Name: not_defined # Def: SMI1 / KNR4 family # Organism: B.cereus_B4264 # Pathway: not_defined # 5 216 2 209 216 164 41.0 2e-39 MTEFNWDSFIKELEKFQKGIENIGGHSRETIIEAPAKEEEILEVEKKLGYTLPKDFRDIL LNYSSHFEYFWSTYRDEEEEQIEFPEKFCAIFAGNLHWGLKFLLDFEESRQGWVDICYPD YNNEYDKVWHNKLAFYEVGNGDYYGIELEKENYGKIVYLSHDGGDGHGHYIADNFKDLLN NWSKVGAVGGDDWQWEVFYTEGKGIDPESENAKEWREYIFSKI >gi|292606573|gb|ADGG01000037.1| GENE 87 88844 - 89266 404 140 aa, chain - ## HITS:1 COG:no KEGG:FN1229 NR:ns ## KEGG: FN1229 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 140 7 146 146 188 81.0 5e-47 MLISRVKQVYQYIFSKFDESNNFEIKKILSEEEFLIFSTMSNYDKVHSYSLYQKVKEEKT LSSEKLYLKLALLHDSGKGKVGLFRRIKKVLVGDKLLEQHPNIAFEKLKNINLDLAKLCL QHHDKDVDEKMKIFQELDDK >gi|292606573|gb|ADGG01000037.1| GENE 88 89268 - 90089 1131 273 aa, chain - ## HITS:1 COG:FN1230 KEGG:ns NR:ns ## COG: FN1230 COG2849 # Protein_GI_number: 19704565 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 112 273 1 162 162 247 82.0 2e-65 MNKFNKFIILAGLLFSFSVAYAEIKEVESLDTISKQILGENNTKSKKEKTKETQKKEVTK KETKRENENETEVKSENKASENEETVVNDIPDETATRVINKSEIVDFYEREVRDKIAYKE GSNTPFTGVFGIVIDDKIESYEEYKDGLLDGETAYFSKDKEVKLLSEMYSKGKLNGPQKT YYENGKLKSIVYYKNDRIDGIVEYDKSGKLLHKSIFENGTGDWKLYWSNGKVSEEGRYVS WKRDGVWKKYREDGSLDTILKYDNGRLLSEKWQ >gi|292606573|gb|ADGG01000037.1| GENE 89 90105 - 91571 2039 488 aa, chain - ## HITS:1 COG:FN1231_3 KEGG:ns NR:ns ## COG: FN1231_3 COG0516 # Protein_GI_number: 19704566 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Fusobacterium nucleatum # 204 488 1 285 285 508 92.0 1e-144 MMNGKILKEGITFDDVLLIPAKSDVLPNEVSLKTRLTKKITLNLPILSAAMDTVTESDLA IALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMITNPITLNKDSRVYQAEELMSRYKI SGLPVIEDDGKLIGIITNRDIKYRKDLDQPVGDIMTSKGLITAPVGTNLEQAKEILLANR IEKLPITDQNGYLKGLITIKDIDNIVQYPNSCKDELGKLRCGAAVGIAPDTLDRVAALVK AGVDIITVDSAHGHSQGVINMIKEIKKHYPDLDIIGGNIVTAEAAEELIEAGASAVKVGI GPGSICTTRVVAGVGVPQLTAVNDVYEYCKTRDIGVIADGGIKLSGDIVKALAAGADCVM LGGLLAGTKEAPGEEIILEGRRFKIYVGMGSIAAMKRGSKDRYFQAGEVDNSKLVPEGIE GRIAYKGSVKDVIFQLAGGVRAGMGYCGTKTIKDLQVNGKFVKITGAGLIESHPHDITIT KEAPNYSK >gi|292606573|gb|ADGG01000037.1| GENE 90 91691 - 93103 1594 470 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0877 NR:ns ## KEGG: Lebu_0877 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 470 1 454 454 142 28.0 2e-32 MRKILFAILCLLFVSCSNLYKANKAYERGDYVENVVLTFKYFDEKPENFKELNEKKKNEI NSKFSNIFEYYSKQKNSEKLEDRNRANIELFTIYIVSDNSEYAKEFQAEREFLASDNAKN LFNQALKTNRELFSQNIGLRDDHTYALKVINHTINMNIAINAVIDSNKSLDRNKAELYNY FKREIAKHRADGYISLAEVEEKEGSNEYLRSAQNLYYKANEIYSKYQKNYRNSYSKYEST KYKADLNDAEDNYNKGITEYRNAGSSKAKYRAANYYFKEAQKYVYNYKDTNKLLNETKEK GYFKYSLNSNNVDVKNKISNDLNSIAYPVTNGIELFIDYRDGDYNYNTSSNTNTEQLKKE VQTGVDSTGKPIMKVYNFTKITTTIEEIGTIRYTFSVRGAYYNNNIGNDVTIKNIVKNIK YSGEVPPSSEYRNSDNKALGSSELKKKVEEKVKKEVNGHIDSMIKDLKRI >gi|292606573|gb|ADGG01000037.1| GENE 91 93290 - 95209 2517 639 aa, chain + ## HITS:1 COG:SA2167_2 KEGG:ns NR:ns ## COG: SA2167_2 COG1263 # Protein_GI_number: 15927957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 104 469 5 383 385 241 35.0 3e-63 MEKEKLYQKISKEVLENIGGSENIQGAAHCATRLRIVLKDLSLAKTDKLENIDLVKGCFI AGSQLQLIFGAGTVNEVYKVFAKEAKLENMSLSDVKDIANNKENPLQKVIKALSDVFVEI IPAILAAAILLGVTGFLANFEAVKTNQTLYAINRLSNLASVGIFAVLPMVVVYSATKRFG GRAILGIVVGAIMLDGSLANAYSIGTPGFNPEILDLFGLKIQMVGFQGGIIVALMMGYIV AQLDKFFEKKIPSVIKLLVSPMLTVFISTFLLFTIVGPIGRELSNYITGGLVWVSTEFGL IGYMIFAGLQQIIVITGLHHILNAAEAQLIATTGRDFLNPLMSVALISQGGAVLGYYLLH RKERKVAEIALPSFVSILFGISEPAIFGVNLKYKFPLIAGCIAGAVAGAFVYIFKLSSLG FGATAIPGITIIDPANNGYINYIIVHLIGLVLGIVICYTFGKAKTKKVIANEEKVNKNTS EIKVESTTDTNLDEIALISPIKGEVKDISESSDETFASKVMGDGILVNPSEEIFVAPADA KIELVFPTKHAIGLSLKDGSQILMHCGINTVSMNGEGFEVYVEEGQEVKQGDKLIKMDLE KVKQAGHSTQTLMIVNELPDGRKVEVNPDSKTPIMIKKI >gi|292606573|gb|ADGG01000037.1| GENE 92 95218 - 96615 1621 465 aa, chain + ## HITS:1 COG:BH1858 KEGG:ns NR:ns ## COG: BH1858 COG1621 # Protein_GI_number: 15614421 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus halodurans # 2 453 8 473 487 312 37.0 8e-85 MLRKKYIELINKVNTDPYRLHFHLMAPTGWLNDPNGLCVIKGVNHIYFQYTPFSATWGLK SWGHYTTENWIDYTEHPIFLRPSIAEDIDGVYSGSALVENNKIHYYYTGNVKYTDKKYDY ILNGREQNVIEVISEDGFNYEKKNVLLKNSDYPQNMSTHVRDPKIFKVEDEYFMILGARK KQDIGCAILYKSLDLKKWEYFFEIYSEKKYGYMWECCDLIKIEDKWFLICCPQGVEQEGI NFANIYQIGYFPIDINFKEKTYSLGEFMELDRGFDIYAPQTFVDNKGRNILIAWMGIPDA TYTNNKTIKNGWQHALSMPRALKRKENKILQEPLVEFENLRKNKISSTDNHINFLASTFE MIIDIENSENFLVKMEDVKLSYDNNIFSLEMQESGEGRDKRSVYLEELKKLRIFVDTSSI EIFINDGEEVFTSRFYPNKAKINIEVFNHGSCSYYDLDEFKIDVE >gi|292606573|gb|ADGG01000037.1| GENE 93 96697 - 96897 423 66 aa, chain - ## HITS:1 COG:FN0528 KEGG:ns NR:ns ## COG: FN0528 COG1278 # Protein_GI_number: 19703863 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Fusobacterium nucleatum # 1 66 6 71 71 102 100.0 2e-22 MKGTVKWFNKEKGFGFITGEDGKDVFAHFSQIQKEGFKELFEGQEVEFEITEGQKGPQAS NIVVIK >gi|292606573|gb|ADGG01000037.1| GENE 94 97261 - 97791 723 176 aa, chain + ## HITS:1 COG:no KEGG:FN1296 NR:ns ## KEGG: FN1296 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 21 176 9 169 169 98 39.0 9e-20 MKKLVLLLLVIVSVFSFGANFKPYLKGNTSNPDAKKILFSAQMESTKKVVTLYKDREKVV YVFGLEGKKPEITLEGVIGENLFFNADDTESYSGKFLVFINEGHRYIVSFYNVNGKTRSY LLEAYKGTNPRPLYKKQLNNKTVYDKVFNDPNNAEGFNGLFYDQNYLDDESFYINY >gi|292606573|gb|ADGG01000037.1| GENE 95 97856 - 98314 521 152 aa, chain + ## HITS:1 COG:FN1295 KEGG:ns NR:ns ## COG: FN1295 COG0454 # Protein_GI_number: 19704630 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 16 146 1 131 135 194 82.0 7e-50 MIEINQLLNKEKDEALLFVKKVYIESKDESYSEKGIETFCNFVDNKEIIKSFKVYGAFED NVLKGVIATDRRKRHINLFFVDKSSQAKGIGKKLMNIVIDDNENSFITVNSSRYAVPIYE KIGFIKTEEEKEQDGLKFTPMKLILKDEVKGE >gi|292606573|gb|ADGG01000037.1| GENE 96 98320 - 98844 474 174 aa, chain + ## HITS:1 COG:no KEGG:FN1296 NR:ns ## KEGG: FN1296 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 20 164 8 162 169 90 42.0 3e-17 MKKIIIFFLMILSITIFSEEYKPYLKKNITNKNLVFSAQIKDSKKVISIYKENKKLVYVY GLEGEKAEKIIVGNANKNLFKNENEIPLNENNNNKLTENFILFKVKNYTYLISFYNNYGV KENSYTLTVAKNDEEILFDKELDISTVYNNLFNTDFFKKLPYDNGVVAYYITYD >gi|292606573|gb|ADGG01000037.1| GENE 97 99010 - 99570 237 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase [Capnocytophaga ochracea DSM 7271] # 12 163 4 152 175 95 36 9e-19 MNTEINISNVILETDRLILRAWEIRDLDDFFEYASINGVGEKAGWEHHKSKNESLEILKM FINEKKVFAIVLKENQKVIGSIGVEECRQDLDKNLENLLGRELGYVLSKDYWNKGIMTEA VSKVIEYCFKTLKLNYLVAIYFNYNIDSKKVLEKLNFKFYKDIIIETRYNTKEESTLMLL INRSLK >gi|292606573|gb|ADGG01000037.1| GENE 98 99567 - 101129 1489 520 aa, chain + ## HITS:1 COG:no KEGG:FN1293 NR:ns ## KEGG: FN1293 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 117 520 1 393 393 561 79.0 1e-158 MKMDNQKNANIMIKATVLSAIILIFLCLLLIIYVAMFKSDTTDLQYNSEEYENSIFYKNK DKIYALVYGNGLLEVEGVDIPTFKVFDTEANNGNVAYDKNRVYFGNIAVSDLDTNKLYYV GNNYYSDGTNSYFCSTSVETYEELSALSINIKNISHFLFKTKRPQYYFYPYKKLETNKRL EKVEELKNSATDGEEVYYAGEKLVNADIYTIKTIEDALFYFADKENVYYKSKLLSFKNNG KLKVFHENDYNVYYLYDEESKNVYANDYLFETVNAPYKVVGVDGTHHFSLLFISKDGVYF YDPLKRKQERIGDNIFKGEIKEIYPDIFSDDENVYYLDVYEDWAKRSGNNPFSLLKGPFN GQLISRNTRIRYLDKKTAWENDWEKVADINFGRDGSIWKKGNKYYYFDIYGFYQNINRTI YEIVDKEALSYLLNFSNLKDSYYMNLTNKIRDFISEKKLIAFNGEVKMTATIYFHEDPYA YSIPKIIFISIAFLIGLYARYRFDIANFLKKRKKSKFSKK >gi|292606573|gb|ADGG01000037.1| GENE 99 101162 - 102601 1349 479 aa, chain + ## HITS:1 COG:no KEGG:FN1292 NR:ns ## KEGG: FN1292 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 45 474 2 444 453 593 78.0 1e-168 MKTNDLDDLFKKKKTSNTSFYLKIAIIVFVIFPLFFIPFFISNWINADNNTYEIKTNGEQ YEKGNFFKYQGKIYVFTLNDGMQELKNVDIATFKPFEPEDYFTQNIALDKNSVYFENVII PDLNPNKLKVIGNGYYTDGTNTYFYSPFSELDKDSSKYIFPYKKIEGAKNLKALDNFGLF AVDGDNVYYKGEILNNADLNTLEIIDKSTEYFADKENVYYKSNLLPIKNSGKLKIVSSEH GDKFLYDEVNGYVFIEDYSFDREKAPYKVIGNNGTTLYNLIFIAKDGIYYYDNQKKQQLK AGDNIFIGNIEEITPNVFTDDENIYYFHAYDVSTATKKSIGELISKNTDICYLDKKEGWE KVADIKEGYVASIWKKEGKYYYFNNLGIFPFMDNTIYEISDKETLNYLLSKLDDKTDDIE ELIKNEKLIAVSGEKKMTITVKYKTDIVDTVFKYFIRIFLLAYLIFFIFKEFRRKNEKK >gi|292606573|gb|ADGG01000037.1| GENE 100 102588 - 104078 1278 496 aa, chain + ## HITS:1 COG:no KEGG:FN1292 NR:ns ## KEGG: FN1292 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 51 478 8 428 453 447 59.0 1e-124 MKKNNFDETLKFKKKRSSDTIFTFKIISAIILVIVFFIFLLVSSKITSLDSYEIEEKGQK YANSDFIQYQGKISVSVPSGGRYILENVDINSFRVLNSGDRNTRVIGLDKNSVYLGNIPI PDLDPNKLEIIGNGYYTDGTNTFFFSGVSERNKNLSLPMRIFQSLIYSFSKTKKPQTYIY PYKKIDTDKRLKPISDFSSFATDGDNIYYEGEILENVDLNTLKVVDPYHEYFADKENVYY KSKLLPIKNSGKLKIVSSEQGDEFLYDEANGYVFMENYSFDREKAPYKVLGNEGNHLYNL AFVNNEGIYYYDNQKKKQLRAGDNIFVGNVEEISPNIFTDDENIYYFHAYEVRKRLKHSS GNVLASRNTVIYSLGKKDAWEKVNDIESGTVGSIWKKGNKYYYFDNLGIFQLIDNAIYEI RDKETLEYLLNYNEGSDKIGEFIENEKLIKIEGEKKIEIRIKYTTFFISGLLAFILGIVI AKVSHYFREKKNAKKL >gi|292606573|gb|ADGG01000037.1| GENE 101 104062 - 105618 1423 518 aa, chain + ## HITS:1 COG:no KEGG:FN1291 NR:ns ## KEGG: FN1291 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 72 481 2 407 411 373 52.0 1e-101 MQKNSRISFIKFIFIIYVIILIFLSLSYTLLLMKKSGSNSDEIENYGQKYGNTQFIKYQG KISIPVPSGGRYFLEKVDIDSFKVLDSQDYSDRSTLIVGLDKNSVYFGNIRISDLDPNKL EVLGNGYYTDGINTYFCSDMSERNKNLSSPMEIFQTLIYAFSKTKRPQSYIYPYKKVETD KRLKAVDNLLFFATDGDNVYYKGEALVNVDLNTLVPVDGQYTYFTDKENVYYKSKLLPIK NSGNLKTVSLNPDDKFLYDEVNGYVFIEDYSFNREKAPYKIIGSNGTHLYSLIFVSDDGI YFYDSENKKQVKLKDNVFVGNIEEISPNVFTDDENMYYFQNYEIWKRYKNMVFLASRNTG VYSLGKKESWKKLTDVGNENIGSIWQKDSEYYYFDNLENSSQTDDYRATIFKITDKKTLD LESLLAYPEYISAEKIDEFILNKNFEEFKGEKLFIATIKFHNVLKIFLGFLLVLGFIFIV FFLYLKKLDKGDKKNIDKMLLEKYRNIKPLSKDYNDKE >gi|292606573|gb|ADGG01000037.1| GENE 102 105628 - 107418 1609 596 aa, chain + ## HITS:1 COG:no KEGG:FN1289 NR:ns ## KEGG: FN1289 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 596 1 571 571 569 60.0 1e-160 MKVNGEDLSNIEKNANEIEYYKSLNKIFKKNLIIIIIVLILLILFGAISLYKTDSEYNLN QKILNNGQKYEKSIYIKYEGKIYCNSFGDIYQLKDVDIDSFKTFDTGDYRDNYIATDKNN VYLGNNILPDLNPNRLKSLGSNYYSDGVNYYFLSDVYIRNEDISTWSIVKEYIIHFKKKQ LYFYPFKKIETTKALKGIKNFRYLASDGEKVYYKGELIENADFYTLKAVYKYNDDYFYDK NNVYYKTEALNLSSNDNLNLVSVEQGERTYLYDGLNGNVSLEEYIFDKKYIPYQILGIGS AHVRDLLFVSKDGIFFYNPETKEQERVGDNIFKGKIENILPSVISDDKNIYYLHSYDILR KSRPSSRHAHILVSKNIGIFSLGEKKDWEKIKDIDSGTTGQVWKRGNKYYYFDDLGVSQA IDDVVYEIIDNSSLKYLLGTNNIYSSTIRELINNKKLIVFKGEEVSTASVKYKESHVAEI FLAIFLTTFFGISILMISLKWKAQKKDREKLEEERKKIEKQMEFWDNYYNNNEEEKKEDE KIPTPSKSYDDEEEIKKEIDKIKPIVKNSDDIEGLKKREKKINSIIKNFNVDEEEK >gi|292606573|gb|ADGG01000037.1| GENE 103 107483 - 107731 269 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 10 81 1 73 73 108 71 2e-22 MNFYSMGGKMSKKDVIELEGTIVEALPNAMFKVELENGHTILGHISGKMRMNYIKILPGD GVTVQISPYDLSRGRIVYRKKN >gi|292606573|gb|ADGG01000037.1| GENE 104 107750 - 107863 200 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|197735973|ref|YP_002164751.1| hypothetical protein FNP_0496 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 37 1 37 37 81 100 2e-14 MKVRVSIKPICDKCKIIKRHGKIRVICENPKHKQVQG >gi|292606573|gb|ADGG01000037.1| GENE 105 108059 - 108415 591 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] # 1 118 1 118 118 232 99 8e-60 MARIAGVDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPIRK >gi|292606573|gb|ADGG01000037.1| GENE 106 108462 - 108851 660 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739947|ref|ZP_04570428.1| SSU ribosomal protein S11P [Fusobacterium sp. 2_1_31] # 1 129 1 129 129 258 99 8e-68 MAKKTVAKIKKKSKNIPNGVAHIHSTFNNTIVTITDVDGKVISWKSGGTSNFKGTKKGTP FAAQIAAEQAAQIAMENGMRKIEVKVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG CRPPKRRRV >gi|292606573|gb|ADGG01000037.1| GENE 107 108894 - 109481 978 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739946|ref|ZP_04570427.1| SSU ribosomal protein S4P [Fusobacterium sp. 2_1_31] # 1 195 1 195 195 381 100 1e-104 MARNRQPVLKKCRALGIDPVILGVKKSSNRQIRPNANKKPTEYAIQLREKQKAKFIYNVM EKQFRKIYEEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGHIAVNGR RVNIASFRVKVGDVVSVIENSKNVELIKLAVEDATPPAWLELDRAAFSGKVLQNPTKDDL DFDLNESLIVEFYSR >gi|292606573|gb|ADGG01000037.1| GENE 108 109510 - 110490 1424 326 aa, chain + ## HITS:1 COG:FN1283 KEGG:ns NR:ns ## COG: FN1283 COG0202 # Protein_GI_number: 19704618 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Fusobacterium nucleatum # 1 326 17 342 342 563 96.0 1e-160 MLKIEKQAKQINITEVKESNYKGQFVVEPLYRGYGNTLGNALRRVLLSSIPGAAIKGMRI EGVMSEFTVMDGVKEAVTEIILNVKEIVVKAESSGERRMTLSVKGPKVVKAADIVADIGL EIVNPEQVICTVTTDRTLDMEFLVDTGEGFVVSEEIDKKDWPVDYIAVDAIYTPIRKVSY EIQDTMFGRITDFDKLTLNVETDGSIEIRDALSYAVELLKLHLDPFLEIGNKMENLRDEI EEIIEEPIDIQVIDDKSHDMKIEELDLTVRSFNCLKKAGIEDVSQLASLSLNELLKIKNL GKKSLDEILEKMKDLGYDLEKNGSPE >gi|292606573|gb|ADGG01000037.1| GENE 109 110518 - 110868 575 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739944|ref|ZP_04570425.1| LSU ribosomal protein L17P [Fusobacterium sp. 2_1_31] # 1 116 1 116 116 226 100 6e-58 MNHNKSYRKLGRRADHRKAMLKNMTISLVKAERIETTVTRAKELRKFAERMITFGKKNTL ASRRNAFAFLRDEEAVAKIFNELAPKYADRNGGYTRIIKTSVRKGDSAEMAIIELV >gi|292606573|gb|ADGG01000037.1| GENE 110 110986 - 111489 922 167 aa, chain - ## HITS:1 COG:FN0472 KEGG:ns NR:ns ## COG: FN0472 COG0716 # Protein_GI_number: 19703807 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 167 1 167 167 274 95.0 7e-74 MKTVGIFFGTTGGKTQEVVDILAAQLGDAQVFDVANGVDEMEMFDNIILASPTYGMGELQ DDWASVIDEVADMDFSGKVVAFVGVGDAAIFGGNYVESMKHFYDAVEPKGAKIVGFTSTD GYDFEASEAVIDGDKFMGLAIDAAFDTDEITSKVEDWLENKVKDELL >gi|292606573|gb|ADGG01000037.1| GENE 111 111778 - 113085 497 435 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229879795|ref|ZP_04499292.1| SSU ribosomal protein S12P methylthiotransferase [Slackia heliotrinireducens DSM 20476] # 1 435 18 444 446 196 28 6e-49 MKKASIITYGCQMNVNESAKIKKIFQNLGYDVTEETDDADAVFLNTCTVREGAATQIFGK LGELKSLKEKKGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIENNES SHEVYTDNEDELPPRLDAEFASDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVK DVEQYVNKGAKEIVLLGQNVNSYGKDFKNGDNFAKLLEEICKVEGDYIVRFVSPHPRDFT DDVIDVIAKNDKISKCLHLPLQSGSSQILRKMGRGYTKEKYLALVDKIKSKIPDVALTAD IIVGFPGETEEDFLDTVDVVEKVSFDNSYMFMYSIRKGTKAATMDNQIDENVKKERLQRL MKVQNECSFNESSKYKDKVVRVLVEGPSKKNKEVLSGRTSTNKIVLFKGDTALKGQFVDV KINECKTWTLYGDIV >gi|292606573|gb|ADGG01000037.1| GENE 112 113106 - 114344 1388 412 aa, chain + ## HITS:1 COG:FN0476 KEGG:ns NR:ns ## COG: FN0476 COG1158 # Protein_GI_number: 19703811 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Fusobacterium nucleatum # 1 412 1 413 413 677 84.0 0 MDILNKFLLKDLQEIAKIMDIEVNGQKKEELKALIIEALEDNNTVLAYGVLDTAPEGFGF LKETTLGKNIYMSASQVKKFKLRRGDTILGEVRNPIGEEKNFAIRRVLRVNNDDLAKIAD RIPFEDLVPTYPREQIKLGLDHDNISGRILDLIAPIGKGQRSLIIAPPKAGKTTFISSIA NAIIKGEKDTEVWILLIDERPEEVTDIKENVEGATVFASTFDDDPKNHIKVTEEIIERAK MKVEDGENVVILLDSLTRLSRAYNIVIPSSGKLLSGGIDPMALYHPKNFFGAARNIKNGG SLTIIATILVDTGSKMDEVIYEEFKSTGNCDIYLDRQLAEFRVFPAIDITRSGTRKEELL LKKSQIEEIWNLRRLLNDYDNKVSSTAALIKAIKITKNNDELLKQLPKVLYK >gi|292606573|gb|ADGG01000037.1| GENE 113 114367 - 114735 257 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262066965|ref|ZP_06026577.1| ## NR: gi|262066965|ref|ZP_06026577.1| cell wall endopeptidase family M23/M37 [Fusobacterium periodonticum ATCC 33693] # 1 69 1 69 387 129 91.0 4e-29 MKRIVKRTMACLLILAIVVFSFRLYMISSKEVVDTTQFTDYFQLDEADNGGLELTTSNFT TFEKEYNFVKEEKVEEDKKRGKKRNLHLHHLQRELNKLHIKLKRKIQYQLLLKGMVLNKI LF >gi|292606573|gb|ADGG01000037.1| GENE 114 114735 - 115517 1082 260 aa, chain + ## HITS:1 COG:FN0477 KEGG:ns NR:ns ## COG: FN0477 COG0739 # Protein_GI_number: 19703812 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Fusobacterium nucleatum # 1 260 66 321 321 367 77.0 1e-102 MNNKNALNNKMKVGDTITFPSIDGLYYKLEKNDTLSKIAKKYGISVVDIVDYNNVNPKRL KAGTTIFLKGVTLQKYKDVEGRLIAAQQAKEDKKKNKDKEKPEKPPKGTKDAPPPPPPQD DGDDGGKAASYSGAGFAYPVRYAGVSSPFGNRYHPVLRRYILHTGVDLVAKYVPLRAAKA GVVTFAGNMSGYGKIIIIRHDNGYETRYAHLSVISTNVGEHVNQGDLIGKTGNSGRTTGA HLHFEIRQNGVPKNPMKYLR >gi|292606573|gb|ADGG01000037.1| GENE 115 115576 - 116631 1654 351 aa, chain + ## HITS:1 COG:FN0478 KEGG:ns NR:ns ## COG: FN0478 COG0821 # Protein_GI_number: 19703813 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Fusobacterium nucleatum # 2 351 5 354 354 584 92.0 1e-167 MTRVVKVGNLKIGGNNPIIIQSMTNTNSSDVEATVKQINELEKVGCQLVRMTINNVKAAE AIKEIKKRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIGSDENVKKVVEAAREKNI PIRIGVNSGSIEKEILEKYRKPCVEALVESALYHVRLLEKFNFFDIIISLKSSNVKMMVE AYRKISSLVDYPLHLGVTEAGTKFQGTVKSAIGIGALLVDGIGATLRVSLTENPVEEIKV AKEILKVLDLSDEGVEIISCPTCGRTEIDLIGLAKQVEEEFQNEKNKFKVAVMGCVVNGP GEAREADYGIAAGRGIGILFKKGEVVKKVSEENLLEELKKLIAEDLKKFKN >gi|292606573|gb|ADGG01000037.1| GENE 116 116703 - 117152 258 149 aa, chain + ## HITS:1 COG:FN0479 KEGG:ns NR:ns ## COG: FN0479 COG1595 # Protein_GI_number: 19703814 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Fusobacterium nucleatum # 1 149 1 149 149 229 95.0 2e-60 MDFDNIYEEYFDRVYYKVLSVVKNDDDAEDICQETFISVYKNLSKFREESNIYTWIYRIA INKTYDFFKKRKVEFEINDDVLSLPEDINFDTKLILQEKLKLISEKEREIVILKDIYGYK LKEIAEMKNMNLSTVKSVYYKALKDMGGN >gi|292606573|gb|ADGG01000037.1| GENE 117 117153 - 117455 403 100 aa, chain + ## HITS:1 COG:no KEGG:FN0480 NR:ns ## KEGG: FN0480 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 100 1 101 101 133 74.0 2e-30 MTPKEKVRANIYKALLEEEKRKNKRMSIFSIGLFFVGVVTMSTYNSFINTVPNSEINSAS VISADEREALITSIYDNSSVVDKKTTTLNPDELFIFNTQI >gi|292606573|gb|ADGG01000037.1| GENE 118 117472 - 117870 482 132 aa, chain + ## HITS:1 COG:no KEGG:FN0481 NR:ns ## KEGG: FN0481 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 132 1 132 132 182 84.0 2e-45 MKKFFYVLFFVISIFTFASEENGLGIVEDADLRAAGVKVENIKKAKELMNQVSSNYELKL LERKQIELQINKYILDGPEKYLKKIDELFDKIGAIEAAIMKERLRSQIQMKKYITTEQYM KAKEIALKRLSK >gi|292606573|gb|ADGG01000037.1| GENE 119 117977 - 118222 421 81 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739934|ref|ZP_04570415.1| LSU ribosomal protein L31P [Fusobacterium sp. 2_1_31] # 1 81 1 81 81 166 98 4e-40 MRKGIHPEFNVVVFEDMAGNQFLTRSTKVPKETTTFEGKEYPVIKVAVSSKSHPFYTGEQ RFVDTAGRVDKFNKKFNLGKK >gi|292606573|gb|ADGG01000037.1| GENE 120 118280 - 118903 877 207 aa, chain + ## HITS:1 COG:FN0483 KEGG:ns NR:ns ## COG: FN0483 COG0035 # Protein_GI_number: 19703818 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 207 8 214 214 401 98.0 1e-112 MSVIEINHPLIEHKMTILRSVETDTKSFRENLNEIAKLMTYEATKNLKLETTEVTTPLMK TQAYSLQDKVALVPILRAGLGMVDGILDLIPTAKVGHIGVYRNEETLEPVYYYCKLPTDI ASRKVILVDPMLATGGSAVYAIDYLKEQGVTDIIFMCLVAAPDGIAKLLNKHPDVPIYTA KIDQGLNEDGYIYPGLGDCGDRIFGTK >gi|292606573|gb|ADGG01000037.1| GENE 121 119093 - 119881 742 262 aa, chain + ## HITS:1 COG:no KEGG:FN0484 NR:ns ## KEGG: FN0484 # Name: not_defined # Def: lipase (EC:3.1.1.3) # Organism: F.nucleatum # Pathway: Glycerolipid metabolism [PATH:fnu00561]; Metabolic pathways [PATH:fnu01100] # 22 261 1 240 240 395 82.0 1e-109 MKKFFKILFFLIIISIAILWLVKIFFLTHKYQIKNYNEDKIEKDIVITFNGIYGYEKQLR FIDEKLAEDGYTVVNIQYPTVNENIAEMTEKYIAPNIEEQVKRLEQVNLERKAKNLPELK INFVVHSMGTCLLRYYLKENKLASLGKVVLITPPSHGSQLSDNPIADLIPYFIGPAVKDM KTDKDSFVNQLGNPDYPCYILIADSSNNFLFSLFIKGKDDGMVPLATAGLEGASLKTIEN TTHTSILEKQETVDEILQFLKN >gi|292606573|gb|ADGG01000037.1| GENE 122 119951 - 120961 1562 336 aa, chain - ## HITS:1 COG:FN0487 KEGG:ns NR:ns ## COG: FN0487 COG1052 # Protein_GI_number: 19703822 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Fusobacterium nucleatum # 1 336 1 338 338 603 89.0 1e-172 MKVLFYGVREVEVPLFHEQNKRFGFDLELIPDYLNSKETAEKAKGFECVVLRGNCFATKE VLDMYKEYGVKYLFTRTVGTNHIDVKYAKELGFKLAYVPFYSPNAIAELAVSLAMSLLRH LPYTAEKFNKKDFTVDAKMFSREIRNCTVGVVGLGRIGFTAAKLFKGLGANVIGYDMFPK TGVEDIVTQVSMEELVEKSDIITLHAPFIKENGKIVTKEFLSKMKENSILINTARGELMD LEAVVAALESGHLAGAGIDTIEGEVNYFFKNFSNDEAKFKLEYPLFNKLIELYPRVLVTP HVGSYTDEAASNMIETSLENLKEYLDTGACKNDIKA >gi|292606573|gb|ADGG01000037.1| GENE 123 121339 - 122619 2014 426 aa, chain + ## HITS:1 COG:FN0488 KEGG:ns NR:ns ## COG: FN0488 COG0334 # Protein_GI_number: 19703823 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Fusobacterium nucleatum # 1 426 15 439 439 770 94.0 0 MSKETLNPLASGQKQVKIACDALGLDPAVYELLKEPQRIIEISIPVKMDDGSIKTFKGYR SAHNDAVGPYKGGIRFHQNVNSDEVKALSLWMSIKCQVTGIPYGGGKGGITVDPSELSQR ELEQLSRGWVRGMWKYLGEKVDIPAPDVNTNGQIMAWMQDEYNKLTGEQTIGVFTGKPLS YGGSQGRNEATGFGVAVTMREAFTALGKDLKGATVAVQGFGNVGKYSVKNIMKLGGKVVA VAEFEKGKGAFAVYKAEGFTFEELEAAKAAGSLTKVPGAKELTMDEFWALDVEAIAPCAL ENAITNHEAELIKSGVIICEGANGPITPEADEVLYKKGVTVTPDVLTNAGGVTVSYFEWV QNIYGYYWTEKEVEEKEERAMVDAFKPIWALKKEFDEKGQPISFRQATYMKSIKRIAEAM KIRGWY >gi|292606573|gb|ADGG01000037.1| GENE 124 122761 - 126162 3399 1133 aa, chain - ## HITS:1 COG:FN1383 KEGG:ns NR:ns ## COG: FN1383 COG0587 # Protein_GI_number: 19704718 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Fusobacterium nucleatum # 1 1133 1 1133 1133 1799 83.0 0 MENNFVHLNLHTEYSLLEGVNSIDSFLTRAKELGMNSLAVTDYANMFCAIEFYEKAKKMG IKPIIGLELPLYEKEEQNIFTLTLLAKDYEGYKNLVKLASELYKKKDNRELRISKEILKE HSKGLIALSSSMKGEIGKAILMNFPSEKLDKIVDEYIEIFSKENFYLEIQANELLETKVI NDKFYEIAKLKNIELVATNNVHYVDRDGYELQDIVICIQSGWKLKDKNRKRAVSKELYLK SKEEMQRSLDERFHKAIENTNYIASLCNLEIKFGNLQFPYYEVPNQYSGMDEYLKSICYE NIKKIYKENLTKDILERLEYELSVIIKMGYSGYFIVVWDFIAYAKRNGIPVGPGRGSAAG SLVAYCLGITMIDPIRYNLLFERFLNPERISMPDIDIDICRERRDELIDYVVHKYGRERV AHIITFGRMKARAAIRDIGRVLDIDLKKIDRLSKLVSSFQTLEKTLKENVEVAKLYTTDI ELQKVIDLSIRIENKIRHVSTHAAGILITKEDLDRTVPIYLDEKEGVIATQYQMKELEDL GLLKIDFLGLKNLSNIQRTIDYIKKYKNIDIELYKIPLDDKKVFEMLSQGDSTGVFQLES TGIRKIMKRLKPNKLEDIVALLALYRPGPLQSGMVDDFINRKNGKEKIEYPHKNLEIILK ETYGVILYQEQVMKIASYMANYSLGEADLLRRAMGKKNFAIMRENREKFIQRAVENNYTE EKADEIFELIDKFAGYGFNKSHSVAYAMISYWTAYLKAYYPAFYFAAIMTSEISETGDIA YYFNDAKEHKIRIYPPNVNTPSAYFEIKNDGISYSLAAIKNLGLNLAKKIVEDYEKNGVY SKLDEFLIRNKKNGINKRALEALILSGALDELEGNRKEKFLSIDKVLDYVSKASKTDEIQ QMNLFGEASKTINKFTLTSCEDFNLDEKLTKEKEFLGFYLSSHPLDKYKDIITTFSINKL SEIDAEESKVLKTFGTITGLKKIITKKEEQMALFSILCYDRAISCIAFPKTYDKYLEEII EKRTVYIEGKIQIDDYKGEKTTKLLVEKIISLDKLYDYPAKKLFILIEEEDRYKYSRLRE LITSNKGNTDFVFAIKNKNEKRTQNTGMKVKLNREFFEQLVDLMGLEKIRIQI >gi|292606573|gb|ADGG01000037.1| GENE 125 126172 - 127956 1934 594 aa, chain - ## HITS:1 COG:no KEGG:FN1385 NR:ns ## KEGG: FN1385 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 18 594 1 578 578 799 81.0 0 MMNELEHILSKRYKQEALFGLFQRYFVDWIADAYIAKDMNIFEISAINEKTDKEVLVKFL AEFYGNEEIFKKIFETLPEEVKEIFKVVVWEEKFPIKKEDLKKYLESYVDKFEKEAYAPK EEYLFFDLDEFDKDMNTSFSMKDDIARFIRNYIDTKPKDYYLHKAEEENIVFKLYKDNNE NEFINNMNFYLDFYNSGENPISSSGKILKDFKKNMQKHCGITEYYNDVKGLEFLKTETLC LILTLLEKKYRVNTYFNNKNIKNILNDFMTAETFEKSDNYIYTNLFLNFLKGTRNIWEHP ENIKEVLKSLVELLKEMPENEVVSIENILKAFVYRGKNIELITFKDVKDYIYINEANGER AKITDYSQYKDYIIEPFIKSYIFLLGIFGVFEIFYEKPFFKKRLYLKNNYLSKYDGLKYV RLTNLGRFIFGHTERYELPKINEKAEIELDDKRQFVTIVGEAPAKMMFFEKIGTKVKDNM FKLTYDSFIKGIKTYDELMERIEKFKENIDNKKLTSNWEDFFENLEKKFNSVKIEDDYIV LKLKNNKELIQTVIRDKRFKTLALKGEEYHLLVKRENLKELIKIFSEYGYYIVE >gi|292606573|gb|ADGG01000037.1| GENE 126 127968 - 130658 2555 896 aa, chain - ## HITS:1 COG:FN1386 KEGG:ns NR:ns ## COG: FN1386 COG0553 # Protein_GI_number: 19704721 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 8 896 1 892 892 1258 82.0 0 MVDVSFYMLVEEEGSFSLALYDSEKNVISNYSNLRQNVVNDYIENLENEREFFISWDEKK SEYLSIDTTLLKYLLEHGNFVNSDFEKIEKSEIENISLLIRENREIEDKLDIFIEINDNL LSKKNIIDNYIYSQGVFYEVKGLGEFTLDELFQNIDKYELETYCSLILKNYNNIELKYED YETINAEEKLAIPQIIIEKISFDNSLYLKVNSIISTMDYDFFKKNNLENIVTVNEVEKKL EISRINLENLTSDMLEIVKVLVKLQKNTGLKSSYYIDNENFIILNEEIAKEFVKKELLQL ANKYSIIGTDKLRKYNIKAVRPRLSGKFSYHLNYLEGEVDIEIEGEKFSIQELLNKYRKD EYIVLSDGTNALINREYIEKLQRIFKDEDENKVKISFFDMPIVQDILDEKTFNNEFAGNK DFFEGINKINENDIVFPKLNATLRDYQKYGYKWLKYLTDNRLGACLADDMGLGKTLQAIA LISKTHEEKKKRSMVIMPKSLIFNWESEIKKFAPNLKIAVYYGINRELSILKKADVVLTT YGTIRNDIENLLKEKFDLLVLDESQNIKNINSQTTKAVLLLNAEKRVALSGTPVENNLLE LYSLFRFLNPEMFGTVQSFTNNYIIPIQKYSDTSTIEELRKKIYPFLLRRVKKEVLADLP DKIEKLVYVDMNDEHRKYYEEKRKYYYSLLENNTSSQGTFDKFFVLQAINELRHIVSSPE LDNNKIISSKKEVLIENVIEAIENDHKVLIFVNYLSSIESICNSLKENKIKFLKMTGQTK DRQSLVDKFQSDNRYKVFVMTLKTGGVGLNLVSADTIFIYDPWWNKTVENQAIDRAYRLG QDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDLISEDNLSTKNLSKNDIEFILGN >gi|292606573|gb|ADGG01000037.1| GENE 127 130661 - 131374 713 237 aa, chain - ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 1 237 1 237 237 359 82.0 3e-99 MIYYIYHSGFVLELEKSILIFDFYRIPTDKKNEEESFISKFIKRTDKKVYVFSSHSHSDH FNKEILKWLNLNENIKYILSDDIKIHKHKNFYFTKEGDSFELDNLKISTFGSTDLGSSFY VNVEDKNIFHSGDLHLWHWEDDTPEEEKTMYDAYMSELEKIKKLDRIDIAFVPVDPRLGV NTLEGVELFYKVLKPKLIVPMHFSDDYSQMKNFIGAFKNIKDVEVIEIDESMKKILE Prediction of potential genes in microbial genomes Time: Thu May 19 22:00:20 2011 Seq name: gi|292606572|gb|ADGG01000038.1| Fusobacterium sp. 1_1_41FAA cont1.38, whole genome shotgun sequence Length of sequence - 1657 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 1, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 524 752 ## FN2051 hypothetical protein 2 1 Op 2 . + CDS 539 - 1000 752 ## FN2050 hypothetical protein 3 1 Op 3 . + CDS 1021 - 1266 330 ## FN2049 hypothetical protein 4 1 Op 4 . + CDS 1236 - 1656 643 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins Predicted protein(s) >gi|292606572|gb|ADGG01000038.1| GENE 1 3 - 524 752 173 aa, chain + ## HITS:1 COG:no KEGG:FN2051 NR:ns ## KEGG: FN2051 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 34 154 21 141 179 73 58.0 3e-12 AKEAEEKARKEAEEQARLAEKAAKEQAQAVEVVEAPVETVVATEGLNPQDEKEAMEILDG MRKKIKKEDTETLKLQQEAKELGISTSEASSLAEIEAMVKAKKAEKAKPKTEAEKLEATR KEALDKLDFYERVVRSVAREEAEVAGYYQIMDEDIKTTEAIEEATPVVEPVQQ >gi|292606572|gb|ADGG01000038.1| GENE 2 539 - 1000 752 153 aa, chain + ## HITS:1 COG:no KEGG:FN2050 NR:ns ## KEGG: FN2050 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 153 1 126 126 83 53.0 2e-15 MKSKLMLTALLGVLLVGSFAYAEENDDEAKKRLLKEYEKVQKEREKEAEEAAKRQAEEGT QTVQDIANQTTENGEVVEGATVEGGEVAVAQEEVTPKKSRKNMTESEKMDEEIQRIKKRM LEINDKIENYNKTNEMLDNLEKNVGELERRVSY >gi|292606572|gb|ADGG01000038.1| GENE 3 1021 - 1266 330 81 aa, chain + ## HITS:1 COG:no KEGG:FN2049 NR:ns ## KEGG: FN2049 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 81 1 82 82 102 76.0 5e-21 MKKLALVLGVLSLVACTDQKVVNYNTARLDNIETYLANNKAVKPSENVDKLVEEGKVEYT EEYLSLEKEAEKWQRERVQQQ >gi|292606572|gb|ADGG01000038.1| GENE 4 1236 - 1656 643 140 aa, chain + ## HITS:1 COG:FN2048 KEGG:ns NR:ns ## COG: FN2048 COG2885 # Protein_GI_number: 19705338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Fusobacterium nucleatum # 34 140 1 107 151 166 79.0 2e-41 MAKRKSTTTIITLLLLFVFSLPALAVQALTTTQMRENTIRINALEIKNIDITNIEAPKEM TIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSVGSNQYNIGLSR RRAEAVKAKLIEFGLPEDRI Prediction of potential genes in microbial genomes Time: Thu May 19 22:00:50 2011 Seq name: gi|292606571|gb|ADGG01000039.1| Fusobacterium sp. 1_1_41FAA cont1.39, whole genome shotgun sequence Length of sequence - 73845 bp Number of predicted genes - 71, with homology - 70 Number of transcription units - 27, operones - 17 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 250 172 ## - 5S_RRNA 86 - 141 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + Prom 291 - 350 24.3 2 2 Tu 1 . + CDS 432 - 1205 935 ## COG0796 Glutamate racemase + Term 1210 - 1250 5.1 - Term 1198 - 1239 4.0 3 3 Op 1 . - CDS 1246 - 1596 573 ## PROTEIN SUPPORTED gi|19703772|ref|NP_603334.1| 50S ribosomal protein L19 4 3 Op 2 . - CDS 1677 - 2231 634 ## FN0429 hypothetical protein - Prom 2258 - 2317 7.2 5 4 Op 1 1/0.429 - CDS 2326 - 2919 721 ## COG0353 Recombinational DNA repair protein (RecF pathway) 6 4 Op 2 1/0.429 - CDS 2930 - 3226 418 ## COG2926 Uncharacterized protein conserved in bacteria 7 4 Op 3 5/0.000 - CDS 3245 - 4213 1693 ## COG0205 6-phosphofructokinase 8 4 Op 4 10/0.000 - CDS 4224 - 5165 1502 ## COG0825 Acetyl-CoA carboxylase alpha subunit 9 4 Op 5 . - CDS 5178 - 6092 1129 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 6183 - 6242 11.1 + Prom 6243 - 6302 13.5 10 5 Tu 1 . + CDS 6324 - 6845 542 ## FN0407 hypothetical protein + Term 6853 - 6906 1.1 + Prom 6890 - 6949 4.7 11 6 Op 1 1/0.429 + CDS 6977 - 8041 1155 ## COG0787 Alanine racemase 12 6 Op 2 . + CDS 8112 - 9089 1203 ## COG0180 Tryptophanyl-tRNA synthetase 13 7 Tu 1 1/0.429 - CDS 9304 - 11376 2305 ## COG1200 RecG-like helicase - Term 11384 - 11424 8.6 14 8 Op 1 . - CDS 11435 - 12184 1264 ## COG0217 Uncharacterized conserved protein 15 8 Op 2 1/0.429 - CDS 12263 - 14791 3200 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 16 8 Op 3 1/0.429 - CDS 14803 - 15357 716 ## COG1396 Predicted transcriptional regulators 17 8 Op 4 1/0.429 - CDS 15376 - 16572 1704 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 18 8 Op 5 1/0.429 - CDS 16588 - 17097 652 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 19 8 Op 6 1/0.429 - CDS 17097 - 19292 2570 ## COG0826 Collagenase and related proteases 20 8 Op 7 . - CDS 19289 - 19861 912 ## COG0237 Dephospho-CoA kinase + Prom 20019 - 20078 11.3 21 9 Op 1 . + CDS 20153 - 20689 258 ## FN0534 hypothetical protein 22 9 Op 2 . + CDS 20714 - 21292 904 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 21293 - 21338 6.8 - Term 21286 - 21318 -0.9 23 10 Op 1 1/0.429 - CDS 21327 - 22472 1396 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 24 10 Op 2 . - CDS 22490 - 23074 625 ## COG0344 Predicted membrane protein - Prom 23101 - 23160 8.1 - Term 23140 - 23187 8.1 25 11 Op 1 1/0.429 - CDS 23197 - 23607 617 ## COG1970 Large-conductance mechanosensitive channel 26 11 Op 2 . - CDS 23665 - 24753 1463 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 27 11 Op 3 . - CDS 24765 - 25367 647 ## FN0764 amino acid transporter LysE - Prom 25531 - 25590 10.7 + Prom 25431 - 25490 15.7 28 12 Tu 1 . + CDS 25514 - 25870 261 ## FN0762 hypothetical protein + Term 25880 - 25912 3.0 - Term 25867 - 25899 3.0 29 13 Tu 1 . - CDS 25908 - 26342 578 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 26365 - 26424 11.8 30 14 Op 1 24/0.000 - CDS 26494 - 27192 938 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 31 14 Op 2 1/0.429 - CDS 27194 - 29095 2600 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 32 14 Op 3 17/0.000 - CDS 29104 - 29760 940 ## COG0569 K+ transport systems, NAD-binding component 33 14 Op 4 1/0.429 - CDS 29770 - 31116 1079 ## COG0168 Trk-type K+ transport systems, membrane components 34 14 Op 5 1/0.429 - CDS 31131 - 32483 1572 ## COG0534 Na+-driven multidrug efflux pump - Prom 32534 - 32593 4.6 35 15 Op 1 1/0.429 - CDS 32659 - 34224 1958 ## COG0038 Chloride channel protein EriC 36 15 Op 2 . - CDS 34250 - 34894 819 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) - Prom 34942 - 35001 12.0 + Prom 34903 - 34962 9.8 37 16 Op 1 . + CDS 35050 - 35889 1124 ## CCC13826_0034 hypothetical protein 38 16 Op 2 . + CDS 35928 - 36815 992 ## CCC13826_0034 hypothetical protein 39 16 Op 3 . + CDS 36843 - 39506 4008 ## COG0525 Valyl-tRNA synthetase 40 16 Op 4 . + CDS 39532 - 41580 2180 ## COG0286 Type I restriction-modification system methyltransferase subunit 41 16 Op 5 . + CDS 41631 - 42737 1198 ## HSM_0573 hypothetical protein + Term 42777 - 42826 1.1 + Prom 42837 - 42896 10.0 42 17 Op 1 2/0.000 + CDS 42942 - 43388 559 ## COG1846 Transcriptional regulators 43 17 Op 2 12/0.000 + CDS 43385 - 44926 1755 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 44 17 Op 3 1/0.429 + CDS 44926 - 45648 362 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 45 17 Op 4 . + CDS 45705 - 46250 723 ## COG0386 Glutathione peroxidase + Term 46261 - 46294 3.1 + Prom 46257 - 46316 6.6 46 18 Tu 1 . + CDS 46374 - 48026 223 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 48112 - 48173 6.9 47 19 Tu 1 . - CDS 48273 - 49160 968 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 49184 - 49243 9.6 + Prom 49192 - 49251 13.2 48 20 Op 1 1/0.429 + CDS 49277 - 49978 1003 ## COG0775 Nucleoside phosphorylase 49 20 Op 2 . + CDS 49991 - 51226 1613 ## COG0285 Folylpolyglutamate synthase 50 20 Op 3 . + CDS 51219 - 52328 1742 ## gi|294783035|ref|ZP_06748359.1| axoneme-associated protein Mst101(2) 51 20 Op 4 . + CDS 52346 - 54193 2360 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 52 20 Op 5 . + CDS 54212 - 55180 254 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 53 20 Op 6 . + CDS 55191 - 56600 1651 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 54 21 Op 1 1/0.429 - CDS 56809 - 57594 1154 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 55 21 Op 2 13/0.000 - CDS 57643 - 58857 1479 ## COG0457 FOG: TPR repeat 56 21 Op 3 . - CDS 58867 - 61293 3145 ## COG0457 FOG: TPR repeat - Prom 61379 - 61438 13.8 - Term 61372 - 61424 12.3 57 22 Op 1 . - CDS 61445 - 62332 1320 ## COG3588 Fructose-1,6-bisphosphate aldolase - Prom 62393 - 62452 7.8 - Term 62474 - 62527 4.4 58 22 Op 2 . - CDS 62528 - 64351 2235 ## COG0326 Molecular chaperone, HSP90 family - Prom 64394 - 64453 9.7 - Term 64427 - 64471 8.8 59 23 Tu 1 . - CDS 64497 - 65039 768 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 65075 - 65134 12.5 + Prom 65159 - 65218 8.2 60 24 Op 1 . + CDS 65255 - 66025 997 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 61 24 Op 2 . + CDS 66054 - 66428 576 ## SSUBM407_1036 hypothetical protein 62 24 Op 3 . + CDS 66496 - 66849 243 ## Vpar_0189 hypothetical protein 63 25 Op 1 . - CDS 66891 - 67025 132 ## gi|262067237|ref|ZP_06026849.1| conserved hypothetical protein 64 25 Op 2 1/0.429 - CDS 67099 - 68124 679 ## PROTEIN SUPPORTED gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 65 25 Op 3 14/0.000 - CDS 68121 - 68696 517 ## COG2137 Uncharacterized protein conserved in bacteria 66 25 Op 4 1/0.429 - CDS 68665 - 69804 1878 ## COG0468 RecA/RadA recombinase 67 25 Op 5 . - CDS 69809 - 70819 851 ## COG0859 ADP-heptose:LPS heptosyltransferase 68 25 Op 6 . - CDS 70821 - 71225 371 ## FN0545 lipopolysaccharide core biosynthesis protein RfaY - Prom 71257 - 71316 6.2 69 26 Op 1 11/0.000 - CDS 71415 - 72446 938 ## COG0859 ADP-heptose:LPS heptosyltransferase 70 26 Op 2 . - CDS 72443 - 73462 981 ## COG0859 ADP-heptose:LPS heptosyltransferase 71 27 Tu 1 . - CDS 73628 - 73843 64 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606571|gb|ADGG01000039.1| GENE 1 2 - 250 172 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no FVSNVVPNCEASSLRVTHPSATQTEVQVDLHVLSILSAFILSQDQTLRSIFFNSSFCYFN LTPNLWLLFVFFSILLLMSLSH >gi|292606571|gb|ADGG01000039.1| GENE 2 432 - 1205 935 257 aa, chain + ## HITS:1 COG:aq_325 KEGG:ns NR:ns ## COG: aq_325 COG0796 # Protein_GI_number: 15605845 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Aquifex aeolicus # 5 226 3 220 254 94 29.0 2e-19 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDELKTIIEDSVDFL LKKGASFIVLASNAPSITVLDKIKNKDNVIGIYPPLKNVIKDKKKNTLIIGAKVMIDSPE LQEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTCEEKYGKLDS ITLSSTHLPWLSSYFQKIIPEAKLYDPADSLVKAIKNYTSEGSGKIYSIISESEKYPADE FLKILETLKIKLDYEII >gi|292606571|gb|ADGG01000039.1| GENE 3 1246 - 1596 573 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19703772|ref|NP_603334.1| 50S ribosomal protein L19 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 116 1 116 116 225 100 6e-58 MKEKLIELVEKEYLRSDIPQFKAGDTIGVYYKVKEGNKERVQLFEGVVIRVNGGGVAKTF TVRKVTAGIGVERIIPVNSPNIDRIEVLKVGRVRRSKLYYLRGLSAKKARIKEIVK >gi|292606571|gb|ADGG01000039.1| GENE 4 1677 - 2231 634 184 aa, chain - ## HITS:1 COG:no KEGG:FN0429 NR:ns ## KEGG: FN0429 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 74 180 1 107 107 140 74.0 2e-32 MGEISKEQYDMLKDIPKDERSKFVAAFERLEKDTAKDYRKYVAIALEKFKVLNDIKEKDI IEVAFDAIWLDKEVSNLQVTENIKFTCKRKASSILEIKKVKFYFNSVDNTFFQRGLGQKE SFWFDIIKEYMKLSELRDNQSLTKFINGFKEKYINKELDKEFYKRLIPKIDNLEIIENFY IDKG >gi|292606571|gb|ADGG01000039.1| GENE 5 2326 - 2919 721 197 aa, chain - ## HITS:1 COG:FN0412 KEGG:ns NR:ns ## COG: FN0412 COG0353 # Protein_GI_number: 19703754 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Fusobacterium nucleatum # 1 197 1 197 197 361 92.0 1e-100 MPTKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKDNVKRCSICG NYCESDICNICSDNTRNHNIICVVEESKDIMILEKTTKYRGVYHVLNGRLDPLNGITPNE LNIKSLIERLGKEDIEEIILATNPNIEGETTAMYLAKLIKNFGIKITKLASGIPMGGNLE FSDTATISRALDDRVEI >gi|292606571|gb|ADGG01000039.1| GENE 6 2930 - 3226 418 98 aa, chain - ## HITS:1 COG:FN0411 KEGG:ns NR:ns ## COG: FN0411 COG2926 # Protein_GI_number: 19703753 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 98 1 98 98 103 91.0 8e-23 MDTVLELVRKERRKNQIKREIEDNDRKIRDNRKRVELLLNLKDYLKESMSYSEIIDIIEN MESDYEDRVDDYIIKNAELGKERREISKTIKEFKKSLS >gi|292606571|gb|ADGG01000039.1| GENE 7 3245 - 4213 1693 322 aa, chain - ## HITS:1 COG:FN0410 KEGG:ns NR:ns ## COG: FN0410 COG0205 # Protein_GI_number: 19703752 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Fusobacterium nucleatum # 1 322 8 329 329 598 96.0 1e-171 MEKKLAILTSGGDAPGMNAAIRATAKIAESYGFEVYGIRRGYLGMLNDEIFPMTGRFVSG IIDKGGTVLLTARCEEFKEARFREIAANNLRKKGINYLVVIGGDGSYRGANLLYKEHGIK VVGIPGTIDNDICGTDFTLGFDTCLNTILDAMSKIRDTATSHERTILVQVMGRRAGDLAL HACIAGGGDGIMIPEMDNPIEMLALQLKERRKNGKLHDIVLVAEGVGNVLDIEEKLRGHI NSEIRSVVLGHIQRGGTPSGRDRVLASRMAAKAVEVLNKGEAGVMVGIEKNEMVTHPLEQ ACSVDRRKSIEKDYDLAILLSR >gi|292606571|gb|ADGG01000039.1| GENE 8 4224 - 5165 1502 313 aa, chain - ## HITS:1 COG:FN0409 KEGG:ns NR:ns ## COG: FN0409 COG0825 # Protein_GI_number: 19703751 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Fusobacterium nucleatum # 1 313 1 313 313 548 92.0 1e-156 MQFEFQIEELEHKIEELKKFSEEKEVDLTEEINKLKDQRDIALKVLYEDLTDYQRVIVSR HPERPYTLDYIENITTDFIELHGDRLFRDDPAIVGGLCKIDGKNFMVIGHQKGRTMQEKV YRNFGMANPEGYRKALRLYEMAERFRIPILTFIDTPGAYPGLEAEKHGQGEAIARNLMEM SGIKTPIISVVIGEGGSGGALGLGVADKVFMLENSVYSVISPEGCAAILYKDPSRVEEAA NNLKLSSQSLLKVGLIDGIIDEALGGAHRGPKETAFNLKRVVLETLEELEKLPLDELVEK RYEKFRQMGVFNR >gi|292606571|gb|ADGG01000039.1| GENE 9 5178 - 6092 1129 304 aa, chain - ## HITS:1 COG:FN0408 KEGG:ns NR:ns ## COG: FN0408 COG0777 # Protein_GI_number: 19703750 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Fusobacterium nucleatum # 1 304 1 304 304 523 88.0 1e-148 MSILKNLVKNLGLTNITPAKKKYVTVGESKSEEEKEKVKYKVKNIDNLKEEEITKCPTCG VLSHKVEIKENLKMCPNCNHYFNMSARERIELLIDKGTFKEEDSNLTAGNPIDFPEYTEK HEKAEHDSGMKEGVISGLGEINGMKVSIACMDFNFMGGSMGSVVGEKITAALERAIEHKI PAIVVAISGGARMQEGLFSLMQMAKTSAAAKKMRLAGLPFISVPVNPTTGGVTASFAMLG DIIISEPNARIGFAGPRVIEQTIRQKLPENFQKSEFLQECGMVDIIAKREDLKETIFKVL NNII >gi|292606571|gb|ADGG01000039.1| GENE 10 6324 - 6845 542 173 aa, chain + ## HITS:1 COG:no KEGG:FN0407 NR:ns ## KEGG: FN0407 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 171 1 171 174 209 66.0 3e-53 MNKNKIFLFLLSLMTLTACSSIESYIPSFITDASTPAAIQEAVASRVNPDKELYSVASSQ LSKSGSTLGQSRANKSASESLRKKVKAEVEAQLRGYLEDMDPFSKNVVNPAFSDLANYST DLSMKKSIQKGAWEDGEKVYSLLTVDRTEIMKITDTVFKDFIKTASKNLGNIK >gi|292606571|gb|ADGG01000039.1| GENE 11 6977 - 8041 1155 354 aa, chain + ## HITS:1 COG:FN0406 KEGG:ns NR:ns ## COG: FN0406 COG0787 # Protein_GI_number: 19703748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Fusobacterium nucleatum # 1 354 1 354 354 587 84.0 1e-168 MRTWVEIDKENLKYNILKLKELADNREVLGVVKANAYGLGSVEIAKILQEVGVNFFGLAN LEEVIELQEAGIKANFLILGASFEDELIEATKRDIHVAISSMQQLKFLVENNLNPNIHLK FDTGMTRLGFEVYEAEEVINFCKTHNLNLVGIFTHLSDSDGNTIDTKNFTLEQIEKFKNI VKGLDLKYIHISNSAGITNFHENILGNLVRAGIAMYSFTGNKKTPCLKNVFTIKSKVLFT KKVNKDSFVSYGRHYTLPADSTYAVIPIGYADGLKKYLTKGGYVLINNHRCEIIGNICMD MTMVRIPKELEKTIKISDEVTVINADIIDNLNIPEFCVWEFMTGIGRRVKRIIV >gi|292606571|gb|ADGG01000039.1| GENE 12 8112 - 9089 1203 325 aa, chain + ## HITS:1 COG:FN0405 KEGG:ns NR:ns ## COG: FN0405 COG0180 # Protein_GI_number: 19703747 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 325 1 325 325 599 93.0 1e-171 MKRSLSGIQPSGILHIGNYFGAMKQFVDLQSDYDGFYFIADYHSLTSLTNPETLRENTYN IVLDYLAIGLDPSKSTIFLQSNVPEHTELTWLLSNITPIGLLERGHSYKDKTAKGIPANT GLLTYPILMAADILIYDSDLVPVGKDQKQHLEMTRDIAMKFNQQYGVEFFKLPEPLILDD SAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPLEEPKNPDNNISKLYALF NNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYFAAAKEKREELEKDIDYVKDVLNEGS KKARAIAIEKVQKAKEIVGLVGNIY >gi|292606571|gb|ADGG01000039.1| GENE 13 9304 - 11376 2305 690 aa, chain - ## HITS:1 COG:FN1660 KEGG:ns NR:ns ## COG: FN1660 COG1200 # Protein_GI_number: 19704981 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Fusobacterium nucleatum # 1 690 1 689 689 1063 83.0 0 MIETYKKMYTKLEDLPSKYITAKQVLNLKSLGIDTIYDLIYYFPRAYDNRSNVKNIGDLT FNEYVVVKASVMSVLNMPNRSGKKIVKAMVTDGTGIMEVLWFGMPYISKSLKVGEEYIFI GQTKKSNLFQFINPEYKLYKGQEKETAEEILPIYSSNKSITQNTLRKIIKKFLENFLKYF EENIPNDLVKGYKEIFERTQAIKNIHFPESVQAIEAANLRFATEELLILELGILKNRFII DSLNTKKYEIEGKKEKVKKFLELLPFELTRAQKKVIKEIYDEISDGKIVNRLVQGDVGSG KTAVATVMLIYMAENGYQGALMAPTEILANQHYLGMKERLEKIGLRVGLLTSSIKGKKKT EILEAISNGDIDIVIGTHSLIEDNVVFKKLGLIVIDEQHRFGVNQRNKLREKGFLGNLLV MTATPIPRSLALSIYGDLDLSIIDELPPGRTPIKTKWIANDKDLSIMYDFIYKKVNSGNQ AYFVAPLIETSDKMALKSVDKVSEEIERRFSDKKIGIIHGKMKAKEKDEVMLKFKNKEYD ILIATTVIEVGIDVPASTIMTIYNAERFGLSALHQLRGRVGRGSKQSYCFLISESTTENS KQRLSIMEKTEDGFIIAEEDLKLRNSGEIFGLRQSGFSDLKFIDIIYDSKTIKDVRDLCI AYLKKNKGKIKNEFLKYDIERKFSDLQSGN >gi|292606571|gb|ADGG01000039.1| GENE 14 11435 - 12184 1264 249 aa, chain - ## HITS:1 COG:FN1661 KEGG:ns NR:ns ## COG: FN1661 COG0217 # Protein_GI_number: 19704982 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 249 1 249 249 437 95.0 1e-122 MSGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGSDPNFNPRLRLAIEKAKAGN MPKDILERAIKKGSGELEGVDFTEMRYEGYGPAGTAFIVEAVTDNKNRTASEMRMTFSRK DGNLGADGAVSWMFKKKGIITVKSEGIDMDEFMMAALEAGAEDVEENDGVFEVTTEYTEF QTVLENLKNAGYQYEDAEITMIPENTVEITDLETAKKVMALYDALEDLDDSQNVYSNFDI SDEILEQLD >gi|292606571|gb|ADGG01000039.1| GENE 15 12263 - 14791 3200 842 aa, chain - ## HITS:1 COG:FN1927_1 KEGG:ns NR:ns ## COG: FN1927_1 COG1461 # Protein_GI_number: 19705232 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 557 1 560 560 887 85.0 0 MKIEIKILTPLRLTKLFIAASRWLLKYADVLNDLNVYPVPDGDTGTNMSMTLQSVENALI GLQTEPKMEELVDIISEAVLLGARGNSGTILSQIIQGFLDEVRDTEEITVPKAARAFVSA KERAYMAVSQPVEGTILTVIRKVSEAAIAYEGPKDDFIPFLVHLKNAAAEAVDDTPNLLP KLKEAGVVDAGGKGIFYVLEGFEKSVTDPEMLKDLARIANSQVNRKQKLEYVNKNEIKFK YCTEFIIESGDFDLEEYKAKIQQLGDSMVVAQTRKKTKTHIHTNHPGQVLEIAGALGNLN NMKIENMEIQHNHVLVKEEELNGGKALVVEEEETVKLLFNEKNIENNVAIYAVVDNKNIA ELFLKDGAAATLIGGQTKNPSVADIEDGLKKISAKTIYILPNNKNIIASAKLAAQRDKRD IIVIDTKTMLEGYYFTKNRKMNLQSLLRQLKFNNSIEITKAVRDTKVNDIEIKIGDHIAL VNGALTERAATLEDLIKIVCDKYINNKTLSLTVVKGKTATEEANGIITAKNLKKFYMYNG EQDNYSYYIYLEQRDPSLSKIAILTDSASDLTHEMTEGLDITIIPVRLRIGENNYKDGVD LTKKEFWHKLITEKVVPKTAQPSPAEFRDYYEELFNKGYEKIISIHMSSKMSGTQQVAKV AREMIKREKDIIIVDSKSVTFGQAYQVLEAAKMAKEDAKLETILARLYEIADKMKVYFAV SDLTYLEKGGRIGRASSMIGSLLKLRPVLKIEDGEVTLETKTFGERGAISYMEKIIKNEG KNSIYLYTAWGGTNQELQSTDILKKTADTMRKIEYKGRFEIGATIGSHSGPVFGIGIISK IR >gi|292606571|gb|ADGG01000039.1| GENE 16 14803 - 15357 716 184 aa, chain - ## HITS:1 COG:FN1928 KEGG:ns NR:ns ## COG: FN1928 COG1396 # Protein_GI_number: 19705233 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 1 184 1 184 184 305 90.0 3e-83 MTIGEKLKKSRNDKGMSLRELATKVDLSASFLSQIEQGKASPSIENLKKIAHTLDVRVAY LIEDEEDDIRNIEFVKAANVRYIESIDSNIKMGLLLASNKEKNMEPIIYEIGIDGESGRD YYSHGNSEEFIYILEGELEVYVANKKYKLAKGDSLYFKSSLNHRFKNTSKKEVKALWVVS PPTF >gi|292606571|gb|ADGG01000039.1| GENE 17 15376 - 16572 1704 398 aa, chain - ## HITS:1 COG:FN1929_1 KEGG:ns NR:ns ## COG: FN1929_1 COG1058 # Protein_GI_number: 19705234 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Fusobacterium nucleatum # 1 237 1 237 237 381 93.0 1e-105 MKAGIFLVGTELLNGATIDTNSIYIAEELNKYGIEIEFKMTVRDVMDEIVKALKYAKKNV DLVILTGGLGPTDDDITKEAMAKFLKKKLVVDEKEKNELLKKYKSYKNPNKTNFKEVEKP EGAVSFKNDVGMAPAVYVDGLVAFPGFPNELKNMFPKFLKYYVKENNLKTQIYIKDIITY GIGESVLENTVKDLFTEEGIFYEFLVKDYGTLIRLQTSSENKKNVEKIIKKLYNRISEFI IGEDNDRIENTIYECLNLGKKPLTISTAESCTGGMIASKLIEVPGISENFIESIVSYSNE AKIKRLKVKKETLEKYGAVSEEVAREMLAGLKTDVAISTTGIAGPGGGTKEKPVGLVYIG IRVKDEVKIFRRELKGDRNKIRQRAMMHALYNLLKILK >gi|292606571|gb|ADGG01000039.1| GENE 18 16588 - 17097 652 169 aa, chain - ## HITS:1 COG:FN1930 KEGG:ns NR:ns ## COG: FN1930 COG1267 # Protein_GI_number: 19705235 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Fusobacterium nucleatum # 4 169 6 171 171 270 95.0 1e-72 MSGHNHKLIKNLATCFGLGEMSFMPGTFGTLGGIPIFLFLTYIKRFFLNVMVYNSFYLVF LVTFFAIAVYVSDICEKEIFKKEDPQAVVIDEVLGFLTTLFLINPVGVKATLIAMGLAFV IFRILDITKIGPIYKSQNFGNGVGVVLDDFLAGIIGNFILVFIWTKFFY >gi|292606571|gb|ADGG01000039.1| GENE 19 17097 - 19292 2570 731 aa, chain - ## HITS:1 COG:FN1931 KEGG:ns NR:ns ## COG: FN1931 COG0826 # Protein_GI_number: 19705236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Fusobacterium nucleatum # 1 731 1 720 720 1172 90.0 0 MKIVAPAGNMERFYSAISATADEIYLGLKGFGARRNAENFTVEELKKAIDYAHLRGSRIF LTLNTIMTNREIELLYPTLKELYNYGLDAIIVQDLGYAEYLHKNFPSIEIHGSTQMTVAN HYEINYLKELGFKRIVLPRELSFEEIKEIRENTDMELEIFVSGSLCISFSGNCYMSSFIG GRSGNRGMCAQPCRKEYKTSCGEKSYFLSPKDQLYGFDEIKKLQEIGVESIKVEGRMKDV SYVYETVSYFRSLINGIDKEENTHKLFNRGYSKGYFYNNDKAIMNRDYSYNMGEKIGEVL GKNIRLDEDIVSGDGVTFVSKDYKNLGGTYIGKINVANVKEDRKIAYKNEKLILNFPEGT KYIFRNYNKRLNDEISKKLKNTDKKLEVNFDFTAKLNEKLNLKIYLEDENGNRILNLEEI SETLTQKAQKRAISEEDIKEKLSEIGDSEFTVKNIEVDIDEDIFIPLSELKNLKRTAVEK FREEILSYFRRDLDSELKASNQEYFKLEIEKDEPKDVEIRVIVSNEEQRSFLEKVKDEYN ISEIYDRTYDIAKQSKLSQHNLDNKLASNLYELLENKNSAVMLNWNMNIVNSYTISVLER IKNLESFIVSPEINFAKIRELGKTRLKKALLVYSKLKGMTIDVDIAENKDEVITNKENDR FNIIRNEYGTEIFLDKPLNIINIEEDIKKLNVDIIVLEFTTETIDEIRKVLKQLKTRKGE YREYNYKRGVY >gi|292606571|gb|ADGG01000039.1| GENE 20 19289 - 19861 912 190 aa, chain - ## HITS:1 COG:FN1932 KEGG:ns NR:ns ## COG: FN1932 COG0237 # Protein_GI_number: 19705237 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Fusobacterium nucleatum # 1 190 4 193 193 254 83.0 6e-68 MIIGLTGGIASGKSTVSKYLAEKGFKVYDADKIAKDISEKISVQKEIVLNFGDKILTEEG KVDRKKLKEIVFADKDKLKKLNGIIHPKVIDFYRELKEKNTDETIIFDVPLLFESGIDKF CDKILVVISDYDVQLNRIIERDNIDRELASKIIKSQVSNEERIKKADIVIENNTSLEELY EKVERFCEKI >gi|292606571|gb|ADGG01000039.1| GENE 21 20153 - 20689 258 178 aa, chain + ## HITS:1 COG:no KEGG:FN0534 NR:ns ## KEGG: FN0534 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 37 178 1 142 142 164 70.0 1e-39 MKKIKFLLVFLPLLTGALIYLLYRSKNLYYYNFIHFLDINGFVLLARETATLYRKLFPTW VIYSLPDGLWLFSAGAVFLIARKRFFLHVIWFFFIYLFVILGEFVQKFFGGHGTPVGTFD KSDIVAFTYAYISINVVAIILRFFQNKDKYIFKNSKEILENICYTIIISIIGLLANMF >gi|292606571|gb|ADGG01000039.1| GENE 22 20714 - 21292 904 192 aa, chain + ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 1 192 1 192 192 363 89.0 1e-100 MKKKNVTVYCGASFGVDKSYQDITRKLGEWIGKNNYNLVYGGGRSGLMGLIADSVLENGG KVTGIITHFLSEREIAHDGITKLIKVDTMSERKKKMADLADIFIALPGGPGTLEEITEVV SWAVLALHPCPCIFFNYDNYYNHIRDFYDLMVEKGYMKKEAREKLCFADSFEEMEKFIAT YVPPKAREYHGE >gi|292606571|gb|ADGG01000039.1| GENE 23 21327 - 22472 1396 381 aa, chain - ## HITS:1 COG:FN0536 KEGG:ns NR:ns ## COG: FN0536 COG0592 # Protein_GI_number: 19703871 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Fusobacterium nucleatum # 1 381 1 381 381 540 85.0 1e-153 MHIKVNRQNFLTAVRIVEKSIKDNKIKPILSCVYAKVKDNKVYFTGTNLDTTIKTSIDVN EVIREGEVAFSPSIIDEYLKEIKDEFVVLRVENGNILFIETEDSTTEYDVFTTEDYPNTF ENINLNENNFKFEMPSQELVEIFEKVLFSADTPDNIAMNCIRIESNNKTLNFVSTNTYRL TYLKKDVEKEINNFAVSIPADTISSIVKIVKGLDNELIKIYKEDAHLYFKYKETTIITKL IELRFPNYADILSNITYDKKLSINNEKFTNLLKRVLIFSRSNMESKYSSTYQFKHGINEE SKLIISALNDIARINEELNISFEGEDLKISLNSKYLLEFIQNIPKEKELVLEFMYANSAV KVYEKDNEDYIYILMPLALRD >gi|292606571|gb|ADGG01000039.1| GENE 24 22490 - 23074 625 194 aa, chain - ## HITS:1 COG:FN0537 KEGG:ns NR:ns ## COG: FN0537 COG0344 # Protein_GI_number: 19703872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 194 1 194 194 260 81.0 9e-70 MTLFLLMVLAYFMGAIPSGVWLGKIFKNIDVRDYGSKNSGATNSYRVLGAKLGTAVLIMD VLKGFLPLYIASKFDLEYNDLVLIGLVAILAHTYSCFISFRGGKGVATSLGVFLFLIPVI TLILLAIFMVIVYFTRYISLGSISAAFLLPIFTFFSDKGSYLFVLSLIIGIFVIYRHKAN ISRLLSGTESKFKF >gi|292606571|gb|ADGG01000039.1| GENE 25 23197 - 23607 617 136 aa, chain - ## HITS:1 COG:FN0766 KEGG:ns NR:ns ## COG: FN0766 COG1970 # Protein_GI_number: 19704101 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Fusobacterium nucleatum # 1 136 7 142 142 202 83.0 1e-52 MKLVDEFKAFVMRGNVVDMAVGVIIGGAFGKIVTSLVNDIFMPIIGMILGNVDFTSLEIK IGEPVEGVEQAAIKYGMFIQEIINFLIIALCIFMFIKLIAKIQKKKDETPAPAPEPTKEE VLLTEIRDALNKMADK >gi|292606571|gb|ADGG01000039.1| GENE 26 23665 - 24753 1463 362 aa, chain - ## HITS:1 COG:FN0765 KEGG:ns NR:ns ## COG: FN0765 COG0482 # Protein_GI_number: 19704100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 1 361 1 361 362 633 89.0 0 MIDVKNVASEFSKYIEFDSDKKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTFKD EDSDAKKVCGDLGIEHYVLDVRDEFKEKVMDYFVNEYMNGRTPNPCMVCNRHIKFGKMLD FILSKGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLSKIIFPVGDLEKPKL RELAKQIGVRVYSKKDSQEICFVDDGKLKEFLIENTKGKAEKPGNIIDKNGKILGKHKGF SFYTIGQRKGLGISSEEPLYVLAFDKDNNNIIVGENEDLFKDELTATRLNLFSVPSLESL DNLECFAKTRSRDILHKCVLKKNGDNFQVKFIDNKVRAITPGQGIVFYNNDGNVIAGGFI ES >gi|292606571|gb|ADGG01000039.1| GENE 27 24765 - 25367 647 200 aa, chain - ## HITS:1 COG:no KEGG:FN0764 NR:ns ## KEGG: FN0764 # Name: not_defined # Def: amino acid transporter LysE # Organism: F.nucleatum # Pathway: not_defined # 48 200 1 150 150 153 69.0 4e-36 MGFILSLPFGPVGIYCMELTIVEGRWKGYITALGMVTIDMVYSAVALLFLSGVKEYIEKY ENYLSLIIGLFLLVVSLRKLLTKIELKDINVDFKSMLQNYLTGAGFAIVNISSILLIATV FTVLNVLDDGNTFPTITYMEAILGVGLGGTGLWFLTTYIISHFRKLFGKEKLIKIIKIAN ATIFILALAIIFYAIKKIIN >gi|292606571|gb|ADGG01000039.1| GENE 28 25514 - 25870 261 118 aa, chain + ## HITS:1 COG:no KEGG:FN0762 NR:ns ## KEGG: FN0762 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 118 1 118 118 133 82.0 2e-30 MTELEVKIIKFLLSSAVYSENAIIKNFGIDKETLDKSFKILEDNGYLESYEEYMKREGLN EEGDCCKTAKDSSCSSCSSCSSHSCSSGSSCCDHNIFSDLEDFSKIKVITMKAVDNFS >gi|292606571|gb|ADGG01000039.1| GENE 29 25908 - 26342 578 144 aa, chain - ## HITS:1 COG:FN1079 KEGG:ns NR:ns ## COG: FN1079 COG0783 # Protein_GI_number: 19704414 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Fusobacterium nucleatum # 1 144 1 144 144 234 89.0 3e-62 MKNKENLNRYLSNLAVLVTKTHNLHWNVVGARFKAIHEYTESLYDYYFEKFDDVAETFKM KGEYPLVKVADYLKHATVKELDAKDFTIPEVVASIKEDIELMLADAKKIREVANEEDDFS VANMMEDHIAYFVKQLWFIQAMSK >gi|292606571|gb|ADGG01000039.1| GENE 30 26494 - 27192 938 232 aa, chain - ## HITS:1 COG:FN1722 KEGG:ns NR:ns ## COG: FN1722 COG0357 # Protein_GI_number: 19705043 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Fusobacterium nucleatum # 1 232 1 232 232 353 91.0 2e-97 MKEYFKEGLEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLL QNLLKEEDKTLIDIGTGAGFPGMMLAIFNEDKNFTLLDSVRKKTDFLELVKSELVLNNVE VINGRAEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLKVNGRFLPQKMTGTDEIENSF NALKILNSKIIKEYNFKLPFSDEDRLIIEILKTKVSDKKYPRKTGIPLKKPL >gi|292606571|gb|ADGG01000039.1| GENE 31 27194 - 29095 2600 633 aa, chain - ## HITS:1 COG:FN1723 KEGG:ns NR:ns ## COG: FN1723 COG0445 # Protein_GI_number: 19705044 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Fusobacterium nucleatum # 1 633 1 633 633 1134 93.0 0 MQEFDIIVVGAGHAGCEAALASARMGMKTAIFTISLDNIGVMSCNPSLGGPAKSHLAREI DALGGEMGRNIDKTFIQIRVLNTKKGPAVRSLRAQADKMTYANEMKKTLEHTDNLSVIQG MVSELVVEEEDGKKIIKGIKIREGLEYRAKIVIMATGTFLRGLIHIGEINFKAGRMGELS SEELPLSLEKIGLKLGRFKTGTPARIDGRTIDFSVLEEQPGDTSQVLKFSNRTTDEEALS RRQIPCYIAHTNEKVHEIIKNARERSPMFNGRIQGLGPRYCPSIEDKVFRYPDKIQHHLF LEREGYETNEIYLGGMSSSLPVDVQEEMIRNVKGFENAKVMRYAYAIEYDYVPPEEIKYT LESRTVENLFLAGQINGTSGYEEAGAQGLMAGINAVRKLRNEEPIILDRADSYIGTLIDD LVSKGTNEPYRMFTARSEYRLYLREDNADLRLSKLGYELGLIPEEEYQRVEKKRRDVELI TEILTKTNVGPSNLRVNETLLKRGENPIKDGSTLLELLRRPEVTFEDIVYISEEIKGVDL KGYDHDTSYQVEITVKYQGYINRALKMIEKHKSMENKKIPADIDYDDLKTIPKEAKDKLK RIKPINIGQASRISGVSPADIQAILIYLKMRGN >gi|292606571|gb|ADGG01000039.1| GENE 32 29104 - 29760 940 218 aa, chain - ## HITS:1 COG:FN1724 KEGG:ns NR:ns ## COG: FN1724 COG0569 # Protein_GI_number: 19705045 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 218 1 218 218 323 83.0 1e-88 MKQYLVIGLGRFGTSVAKTLYEAEKNVLAIDVDEDNVQDKIDRNIIKNAIIGDPSDEKVL KDIGAENFDVAFICVADVEASVMITLNLKELGIKTIIAKAINKKHGKILTKVGATEIVYP EEHMGKRIAELIIDTDIKEHLKFSDDFVLVEVKAPSTFWNNSLINLDVRNKYNINIVGIK KANKEFLPNPTANIIIEEGDILMIITDKKSVEAFNKLI >gi|292606571|gb|ADGG01000039.1| GENE 33 29770 - 31116 1079 448 aa, chain - ## HITS:1 COG:FN1725 KEGG:ns NR:ns ## COG: FN1725 COG0168 # Protein_GI_number: 19705046 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 448 1 448 448 632 89.0 0 MKKLSLLKKWDNLSPYRKLIFGFLVAIFIGVILLKMPFSLRENQNISVLDSLFTIVSAIC VTGLSVVDVSQVFTSTGQLIILFFIQLGGLGVMTVSIIVFLLVGKKMSFETRELLKEERN SNSNGGITNFIKQLLLTVFIIEISGASILTYCFSKYYPLKKSIFYGLFHSVSAFCNAGFS LFTNNLEIFKYDRLINLTISFLIILGGIGFVTINSFVIIKRKKSKNLSITSKFTLIITFF LLTFGTILFLMFEYNNSSTLKDMNFLDKIINSFFQSVTLRTAGFNTVPLGNIKPATVFIS YIFMFIGASPGSTGGGIKTTTFGILILYAFGVLKRKEYVEVFKRRIDWELINKALAIVVI SIFYIVVVTTIILSIESFTTDKVIYEVLSAFSTTGLSMGITAGLGIISKLILVVTMFIGR LGPMTVALAFTSNKTSSIKYPKEDILIG >gi|292606571|gb|ADGG01000039.1| GENE 34 31131 - 32483 1572 450 aa, chain - ## HITS:1 COG:FN1726 KEGG:ns NR:ns ## COG: FN1726 COG0534 # Protein_GI_number: 19705047 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 450 8 457 457 717 90.0 0 METESITKLLIKFSIPAIVGMFVNALYNVVDRIYIGNIKGTGHLGITGVGLVFPVVILIF AFSLLIGIGSAASVSLKLGMKDREEAERFLGVAVFLSLVISAILMIIIYFNMDRIIYFIG GSKETFSYAKNYLFYINLGVPAAILGLVLNSVIRSDGSPKIAMGTLLIGAITNIVLDPIF IFMFGMGVKGAAIATIISQYVSMIWTIHYFMSKRSKIKLIKKDIRYDFYKSKEICLLGSS AFAIQIGFSLVTYILNTVLKKYGGDTSIGAMAIVQSFMTFMAMPIFGINQGIQPILGYNY GAKKYKRVKEALYKGIFAATIICLIGYTSVRLFSDSLIHIFTNKPELKEIAKYGLKAYTL VFPIVGLQIVSSIYFQAVGKPKMSFFISLSRQIIVMIPCLIILPKFFGLNGIWYAAPTAD SIATLITFILVRREIKKLDKLEEMLEKRDV >gi|292606571|gb|ADGG01000039.1| GENE 35 32659 - 34224 1958 521 aa, chain - ## HITS:1 COG:FN1727 KEGG:ns NR:ns ## COG: FN1727 COG0038 # Protein_GI_number: 19705048 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Fusobacterium nucleatum # 1 521 1 521 521 856 86.0 0 MNDAKSMVEKLYKGNGKLYLACLCVGLITGAIVSCYRWGLGKIGLIRREYFSEVNLNNPM ALLKVWALFIGIGLIVNYLFKKFPKTSGSGIPQVKGLILGRIDYKNWFFELISKFVAGVL GIGAGLSLGREGPSVQLGSYVGYGVSKLFKKDTVERNYLLTSGSSAGLSGAFGAPLAGVM FSIEEIHKYLSGKLLICAFVSSIAADFVGRRIFGVQTSFDIAIKYPLDINPYFQFLLYII FGVIIAFFGKLFTVSLVKSQDIFNGIKIPREIKVCFVMTISFILCFVLPEVTGGGHDLVE SLIHQKAIIYTLIIIFIAKLFFTSISYATGFAGGIFLPMLVLGAIIGKIFGECLDLFAAT GADFTVHWIVLGMAAYFVAVVRAPITGVILILEMTGSFHLLLALTTVSVVSFYVTELLGQ QPVYDILYDRMKKDDNLVDEENQEKVTIELPVMAESLLDGKAISEIIWPEEVLIIAIIRN GVEKIPKGRTVMMAGDILVLLLPEKIVGEVKESLMKHTSTE >gi|292606571|gb|ADGG01000039.1| GENE 36 34250 - 34894 819 214 aa, chain - ## HITS:1 COG:FN1728 KEGG:ns NR:ns ## COG: FN1728 COG2039 # Protein_GI_number: 19705049 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Fusobacterium nucleatum # 1 214 1 214 214 348 84.0 5e-96 MKKILVTGFDPFGGEKVNPALEVIKLLPKKIGENEVRILEIPTVYKKSVEKIEKEIESYK PDYVLSIGQAGGRASISIERVAINIDDFRIKDNEGNQPIDENIFEDGENAYFSTLPIKSI QDELSKNNIPSSISNTAGTFVCNHVFYGVRYLIEKKYKGIKSGFVHIPYIPEQVIGKANT PSMGLDNILKGIIIIIETIFNVETDIKKSGGTIC >gi|292606571|gb|ADGG01000039.1| GENE 37 35050 - 35889 1124 279 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0034 NR:ns ## KEGG: CCC13826_0034 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 3 279 17 299 299 194 44.0 4e-48 MKKYFKLFMLMLLVFSYSYSGVMPETDWKIKNLKGKVKSMVKTEYEYDSSGKLEKTWVTE TYFNEQGYITDEVQYVDNRLNQSIIYKNNSDGLPIKKDEVSRVYSYKYEETKDGNLLVTI KEEYVDKKHFPSLEKITYNKNGKKVHCLVYSGEELITNDTYIYNKKGNLIEIKDNTFPEN SMKITYNYKTNGDYEKTTEVATAKWTYLYDKNGNEKEYISMIKQGSQGKTKISIYLKFKD IARDEHGNLTRSTSVRYDYSKKKESSIYKKLENKYEYYK >gi|292606571|gb|ADGG01000039.1| GENE 38 35928 - 36815 992 295 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0034 NR:ns ## KEGG: CCC13826_0034 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 9 294 31 298 299 114 32.0 6e-24 MLMLLVFSYSYAGVMPETEWAKRGLKGKVKSMVKTEYGYENSGKIKFTSLVKTEFNERGY ITRESFTRDGVEYKIVQYQFDKNGFIARRIEEVPQASINNYKYSYKYSKDGNLIEKAELV ERVRGYYPMYDIITYNKLGKEINELKYVEGKLEGDVSTFYNERGDATEVKNNLNPDYPYI LIYYDYHKDGGYEKTVDGSGRRSFIVVDKNGFQRELAYVLFFGSRNPVVQLDIYEKNINE KRDKYGNITEFTSVRYDVLENNKAKAEDIYKQLREQKIKKIGVSGKVEITYEYYN >gi|292606571|gb|ADGG01000039.1| GENE 39 36843 - 39506 4008 887 aa, chain + ## HITS:1 COG:FN2011 KEGG:ns NR:ns ## COG: FN2011 COG0525 # Protein_GI_number: 19705307 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 887 1 887 887 1744 96.0 0 MNELDKNYSPNEIEEKWYKTWEESKFFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNS IQDTLIRYNRMRGKNTLWMPGCDHAGIATQNKVERKLAEEGLKKEDIGREKFLEMTWEWK EKYGGIITQQLRKLGASLDWDRERFTMDEGLSYAVKKIFNDLYHDGLIYQGEYMVNWCPS CGTALADDEVDHEEKDGHLWQIKYPVKDSDEYIIIATSRPETMLADVAVAVHPEDERYKH LIGKTLILPLVNREIPVIADEYVDKEFGTGALKITPAHDPNDYNLGKKYNLPVINMLTPD GKIVNDYPKYAGLDRFEARKKIVEDLKEQAFFIKTEHLHHAVGQCYRCQTVIEPRVSPQW FVKMKPLAEKALEVVRNGEIKILPKRMEKIYYNWLENIRDWCISRQIWWGHRIPAWYGPD RHVFVAMDEAEAKEQAKKHYGHDVELSQEEDVLDTWFSSALWPFSTMGWPEKTKELDLFY PTNTLVTGADIIFFWVARMIMFGMYELKKIPFKNVFFHGIVRDEIGRKMSKSLGNSPDPL DLIKEFGVDAIRFSMIYNTSQGQDVHFSTDLLGMGRNFANKIWNAARFVIMNLEGFDVKS VDKTKLDYELVDKWIISRLNETAKDVEDCLEKFELDNAAKAVYEFLRGDFCDWYVEIAKI RLYNDNEDKKISKLTAQYMLWTILEQGLRLLHPFMPFITEEIWQKIKVDGETIMLQQYPV ADNNLIDVKIEKSFEYIKEVVSSLRNIRAEKGISPAKPAKVVVSTSNSEELETLEKNELF IKKLANLEELTCGANLEAPAQSSLRVAGNSSVYMILTGLLNNEAEIKKINEQLAKLEKEL EPVNRKLSDEKFTSKAPQHIIDRELRIQKEYLDKIEKLKESLKSFEE >gi|292606571|gb|ADGG01000039.1| GENE 40 39532 - 41580 2180 682 aa, chain + ## HITS:1 COG:jhp1365 KEGG:ns NR:ns ## COG: jhp1365 COG0286 # Protein_GI_number: 15612430 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Helicobacter pylori J99 # 5 672 3 673 678 787 64.0 0 MVAKKEKSIEPNITDLVNGWLKSYNLDYKLEQESLNSEIDKALDEYKSKSGGDGGNRPDA KLLLQDEKLNYYPILIEYKGYKDKLVKFDGNGRVDNRTSKNEPNYKNINSYAVNGAIHYA NAILHYTSYTDVIAIGVTGYKKPDETIEHSIGVYYVSKKNLGIGQEVDKYTDLSFLKKEN FNNFIKKVNQLSLTNEELELLKEKREKEINTSLTKLNNDIYANEKGLSETDRVYLVSASI MATLGISGQVTPLEKSDLKSSLEEGSTDGEIIIRKIEAFLKRKNLPIKKQELIVRTLKNT LLSDNINKPVNGESQLKRIFSKIVDDLGIYYKIGLTTDFTGKLFNEMYSWLGFTQDKLND VVLTPSYVANFLVKLARVNKDSYVWDFATGSAGLLVAAMNEMLIDAKDKIKSPQELEQKT LKIKAEQLLGLEVLSNIYMLAILNMILMGDGSSNILNKDSLRDFNGNYAFGEENKKFPAT AFVLNPPYSAEGNGMIFVEKALSLMEKGYAAIIIQHSAGSGKAKEYNKKILEKNTLLASI KMPLDLFIGKSSVQTYIYVFRIGEVHQKDEIVKFIDFSNDGYTRSDRKKASNNLKDTDRA KERYQEMVDLVRFGKSKLNIFTEKEYYEGYIDPENGSDWNQSTPVDTKPTIEDFKKTVAD YLAWEVSNLLKNTERENESLKK >gi|292606571|gb|ADGG01000039.1| GENE 41 41631 - 42737 1198 368 aa, chain + ## HITS:1 COG:no KEGG:HSM_0573 NR:ns ## KEGG: HSM_0573 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus_2336 # Pathway: not_defined # 4 365 1 355 358 141 32.0 4e-32 MGDLFDVITSKGYDAGKLKFINKNRNVFDFIGRTKLNYGVQGLVERLNTDPNEENTISVS QIGSVYAQIRKNKWYSSQNIFVLVPKDKKIINLLVVTSINKTLEKYKGGHTSYPTLDSLK NDIIQLPTTKDGKIDFDFMDVYISELKEERISELVAYLKISGLDNYELLKDEKQIIEDFS NIRWKDYQIGNLFERVKTKKLSYKAKNLPKEPVKDYILPVLTSSFMNQGLNYYVPKAETT ILKNVISIPSNSDVYRAYYQSREFTVLSDAYAVEWKNKEEKFESNEYLFTVSCINKVTDL AIYSYKNKLGGWNVVKNKYIKLPVNSSGEIDFEYMKTFIQAVKKLIIKDVVLYADKKIEV TKEAIENS >gi|292606571|gb|ADGG01000039.1| GENE 42 42942 - 43388 559 148 aa, chain + ## HITS:1 COG:FN2010 KEGG:ns NR:ns ## COG: FN2010 COG1846 # Protein_GI_number: 19705306 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 1 144 1 144 160 194 81.0 4e-50 MQRLGGFLISKLKQLQSRALAQCISKKGIDAFSGEQGKILFVLWQKDKITQKELASKTSL AKNTITAMLEKMEKNNLIKRITDENDKRKSLVILTDYANSLKKSFDEISDEMLQKFYKNF SGEEIDKFEEYLHRIIRNLEENEEGEEL >gi|292606571|gb|ADGG01000039.1| GENE 43 43385 - 44926 1755 513 aa, chain + ## HITS:1 COG:FN2009_2 KEGG:ns NR:ns ## COG: FN2009_2 COG1732 # Protein_GI_number: 19705305 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Fusobacterium nucleatum # 207 513 1 307 307 554 92.0 1e-157 MISQLTKLLTEDFKFFLNLTVEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVN ILYTIPSIALLGFFITITGVGNTTALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMG STKLQQLFKVKLPLALPVLMSGIRNMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAM TFLGSLLIALLALIFDFILGIIEKRLTNHKKTKYKVNFKLIILGLFIIIFRTYFSLNSKK DKAINIATKPMTEGYILGQMLTELIEQDTDLKVNITNGVGGGTSNIHPAIVKGEFDLYPE YTGTSWEAVLKKEGSYDESQFDELQKEYKEKYNLEYVNLYGFNNTYGLAVNKDIAEKYNL KTYSDLAAVSNNLIFGAEYDFFEREDGYKELQKIYNVDFKKKIDMDIGLKYQAMKDKKID VMIIFTTDGQLAISDVVVLEDDKKMYPSYRAGTVVRSEILSKYPELKPVLEKLNNILDDK TMADLNYQVESEGKKPEDVAREYLQEKGLLGAK >gi|292606571|gb|ADGG01000039.1| GENE 44 44926 - 45648 362 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 235 1 239 245 144 34 2e-33 MIEFKNISKSYGNQEVIKDFNLTIECGTFLTIIGSSGSGKTTILKMINGLIKADKGKVLI NDKNIQDEDLIELRRKIGYVIQGNILFPHLTVFDNIAYVLNLKKYDKKEIEKIVNEKMDM LNLSRDLKDRLPDELSGGQQQRVGIARALAANPDIILMDEPFGAVDAITRYQLQKDLKEL HKKTEATIVFITHDITEALKLGTKVLVLDRGEIQQYDVPKNICSNPKNDFVKQLLKMAEM >gi|292606571|gb|ADGG01000039.1| GENE 45 45705 - 46250 723 181 aa, chain + ## HITS:1 COG:FN2007 KEGG:ns NR:ns ## COG: FN2007 COG0386 # Protein_GI_number: 19705303 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Fusobacterium nucleatum # 1 181 17 197 199 319 91.0 2e-87 MKIYDFTVKNRKGEDVSLENFKGKVLLIVNTATRCGFTPQYDELEALYSKYNKDGFEVLD FPCNQFGNQAPESDDEIHTFCQLNYKVKFDQFAKVEVNGENAIPLFKYLQEQKGFTGFDP KHKLTSILNEMLSKNDPDFAKKSDIKWNFTKFLVDKSGNVVARFEPTTGAEEIEKEIKKY L >gi|292606571|gb|ADGG01000039.1| GENE 46 46374 - 48026 223 550 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 333 544 39 250 329 90 31 2e-17 MFFLDLLAAFLISICDLFYPILTRSILYDFIPNRKLKTIFLFLFILALIYIFKMLSNYFV GYYGHIVGVKIQADMRRDLFKHIQNMPISYFDKNQTGDIMSRIVNDLIDISELAHHGPED VFISGVLVLGSFFYLINLNPLLTCIVFFFIPILALLTIFLRKRMMRAFAETRTTVGAINA NLSNSISGIRVSKSFNNSKFEFKKFEEGNSKYIIARKAAYFWLAVFQGGVYYIIDTLYLV MLLSGTLFTYYEKITVVDFVTYMLFVNLLITPVKRLINSVEQFQNGMSGFKRFYEVITVP QEEEGKIEVGKLNGNIVFDEVTFRYEENENVFENFSLNIKAGTNVALVGESGVGKSTICH LIPRFYEILSGKITIDDIDIKDMTLSSLRKNIGIVSQDVFLFTGTVKENIAYGKLDATDE EIFKAAKYANIHDYIMTLEKGYDTQVGERGIRLSGGQKQRISIARVFLANPPILILDEAT SALDSITERNIQKSLDELSEGRTTLVVAHRLTTVRKANVIIVITKDGIAEMGNHDELMKL KGIYYKLNQV >gi|292606571|gb|ADGG01000039.1| GENE 47 48273 - 49160 968 295 aa, chain - ## HITS:1 COG:FN1016 KEGG:ns NR:ns ## COG: FN1016 COG1560 # Protein_GI_number: 19704351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Fusobacterium nucleatum # 73 294 1 222 226 381 88.0 1e-105 MYYIQYIIARFFIFLLLLLPEKLRFKFGDFLGNLTYKLIKSRRMTALMNLKMAFPEKSDE EIEKIARKSFRIMIKAFLCSLWFDKYLKNPKNIKIINQESMLNACKKDKGVMAATMHMGN MEASTVCTGENKIITVAKKQRNPYINDYITKLRGKANYMEVIEKNERTSRVLISKLREKK VIALFSDHRDKGAIINFFGKETKAPSGAVSMALKFDLPFLLVYNTFNDDNTITIYVTDEI ELKKTGNFKEDVQNNVQYLINIMEDVIRKHPEQWMWFHDRWNSFREYKRSLKNKK >gi|292606571|gb|ADGG01000039.1| GENE 48 49277 - 49978 1003 233 aa, chain + ## HITS:1 COG:FN1015 KEGG:ns NR:ns ## COG: FN1015 COG0775 # Protein_GI_number: 19704350 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Fusobacterium nucleatum # 1 233 5 237 237 372 87.0 1e-103 MKIGIIGAMHEEIVELKSSMTDINEIEISNLKFYEGKLCSKDVVLVESGIGKVNAAISTT LLVSNFKVDKIIFTGVAGAVNPDIKVTDIVIATDLVESDMDVTAGGNYKLGEIPRMKSSN FKADSYLFTLADSVATKLFGTERVYKGRIISRDEFVASSEKVKKLREVFEAECVEMEGAA VAHVCEVLNIPFIVLRSISDKADDEAGMTFDEFVKIAAKNSKSIVEGILSIIK >gi|292606571|gb|ADGG01000039.1| GENE 49 49991 - 51226 1613 411 aa, chain + ## HITS:1 COG:FN1014 KEGG:ns NR:ns ## COG: FN1014 COG0285 # Protein_GI_number: 19704349 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Fusobacterium nucleatum # 1 411 5 415 415 712 91.0 0 MNIDALLEELYAYSMFSIRLGLDNIKEICKYLGNPQNSYKVIHITGTNGKGSVSTTVERV LIDAGYKVGKYTSPHILEFNERISFNDKYISNEDIAKYYEKVKKIIEEHKIQATFFEVTT AMMFDYFKDMKAEYVILEAGMGGRYDATNICDNTVSVITNVSLDHTEYLGDTIYKIATEK AGIIKNCPYTIFADNNPDVKKAIEEVTDKYVNVLDKYKDSTYKLDFNTFTTNININGNIY EYSLFGDYQYKNFLCAYEVLKYLGIDENIIKEAIKKVVWQCRFEVFSKNPLVIFDGAHNP AGVEELIKIVKQHFSKDEVTVLVSILKDKDRASMFKKLNEISSSIVLTSIPDNPRASTAK ELYDNVENKKDFEYEEDPIKAYNLALSKKRKLTVCCGSFYILIKLKEGLNG >gi|292606571|gb|ADGG01000039.1| GENE 50 51219 - 52328 1742 369 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783035|ref|ZP_06748359.1| ## NR: gi|294783035|ref|ZP_06748359.1| axoneme-associated protein Mst101(2) [Fusobacterium sp. 1_1_41FAA] # 1 369 1 369 369 256 100.0 1e-66 MDKKKNTKSSNREKPENKKQEVPKKKGNSNTNNIKTKINTSPKVEPKVKKKTSINFQKFL NFIVFLVFIAFTFFMYKKVSNQEKLEQALVENTTKQVVAAMNLRNNEFYGGTKTEIKKEE KVEKVKEEKKVEEDIVETPKEEKTETKTEEKKAIIKSEEPKKEEKKVEKTKADSKVEEKA KPKEATSEKKTETPKEVKAETKTEEKKAITKSEEPKKEEKKVEKPKAETKVEEEAKPKEA TSEKKTEASKEEKATKKAEEAKKIEEGRETVKKVMQEKEKKEAKKEEKKIEKTKTDSKVE EKAKPKETTSEKKTTVKAEEAKKEVKKEVKKEEIKTIKTKKEPVEHLSNEQVKRKLTKEI KEVEGTYTP >gi|292606571|gb|ADGG01000039.1| GENE 51 52346 - 54193 2360 615 aa, chain + ## HITS:1 COG:FN1012 KEGG:ns NR:ns ## COG: FN1012 COG1493 # Protein_GI_number: 19704347 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Fusobacterium nucleatum # 1 615 1 615 615 1062 88.0 0 MYTYTTVREIADSLNLEILNEGNLDLKIDIPNIYQIGYELVGFLDKESDELNRYINICSL KESRFMATFSKERKEKVISEYMALDFPALIFSKDAIIAEEFYYYAKKYNKNILLSNEKAS VTVRKLKFFLSRALSIEEEYEDYSLMEIHGVGVLMTGYSNARKGVMIELLERGHRMITDK NLVIRRIGENDLLGYNGKKKVKLGHFYLEDIQNGSVDVTDHFGVKSTRIEKKINILIVLE EWKEKEFYDRLGLDTQYETFVGEKIQKFVIPVRKGRNLAVIIETAALSFRLKRMGHNTPL EFLNKSQEIIQKKKKEREENMNTNSLAVTKLINEFDLEVKYGRDKVTSTYIKSSNVYRPS LSLIGFFDLIEEVSNIGIQIFSKMEFNFLEKLCPTERINNLKKFLSFDIPMIVLTEDANA PDYFFELVQKSGHILAIAPYKKSSQIIANFNNYLDSFFSETISVHGVLVELFGFGVLLTG KSGIGKSETALELIHRGHRLIADDMVKFYRDTQGDIVGKSAELPFFMEIRGLGIIDIKTL YGMSSVRLSKRLDMIIELKALDNSDYMSAPTTHLYEDVLGKPIKKRILEISSGRNAAAMV EVMVMDYMSGLLGQK >gi|292606571|gb|ADGG01000039.1| GENE 52 54212 - 55180 254 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 5 321 1 308 311 102 28 6e-21 MKEFIEKFKEIKTIIEENQNIILTAHVNPDGDAVGSGLGLFLTLKETYKNKNIRFVLQDS IPYTTKFLKGSEEIETYNSKEKYSTDLLIFLDSATRERTGETGKNIEAKLSINIDHHMSN PSYGDVNCVITYSSSTSEIVYHFIKYMDYKMNLAIAEALYLGLVNDTGNFSHSNVKVETM MMATDLISLGVNNNYIVTNFLNSNSYQTLKMLGDALTKFEFYPEKKLSYYYLDHETMQKY GAKKEDTEGVVEKILSYYEASVSLFLREETDGKIKGSMRSKYETNVNKIAALFGGGGHYK AAGFSSDLSPKEILDIVLKNLD >gi|292606571|gb|ADGG01000039.1| GENE 53 55191 - 56600 1651 469 aa, chain + ## HITS:1 COG:FN1313 KEGG:ns NR:ns ## COG: FN1313 COG4166 # Protein_GI_number: 19704648 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 469 1 474 474 668 75.0 0 MKKIKILVILILSLLLISCGNKEETVEKVEQIFYTAMPKQEYNLNPQSYTGNERALITQI FEGLTELKDEGARYVGVLNIEHSDDFKEWIFTLRDDLKWSDNQKITAETYLESWLNTLEN SNSDEIYRMFVIKGAEDFAKKKVNRNSVGIKVQGNKLIVTLNSSVKNFDEWVSNPIFYPI KEENNSLSLDKKIVNGAFKISTYNEDSIILVRNENYWDNVNTKLKEVNIALVENDIMAYE MFSRNEIDYFGEPFYSIPFDRLGQVNTLPEKLVFPSTRYWYISIPNETNEKIFEKAELRK LMYVVSDPEFMGKVIIENNSPSIFEHPHPSSEVLNKAKEDFEKLNIKFSETPYIAYFSAD KLLEKKLLLSTVKEWVGNFKIPIRVSSSTDSPITFKIENYLVGTNNKNDLYHYINYKYNT KIKTDEEFLNSLVVIPLLQEYNTVLSRSSVRGLNLTPSGDLYLKYINMQ >gi|292606571|gb|ADGG01000039.1| GENE 54 56809 - 57594 1154 261 aa, chain - ## HITS:1 COG:FN1433 KEGG:ns NR:ns ## COG: FN1433 COG4221 # Protein_GI_number: 19704765 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Fusobacterium nucleatum # 2 259 3 260 260 439 86.0 1e-123 MKSNIKGKIAFISGASSGIGKATAEKLAEMGANLIICARRENILNELKEKLEKQYGIKVK TLVFDVRSYSDVLKNINSLDDEWKKIEILVNNAGLAVGLEKLYEYNMEDVDRMVDTNIKG FTYIANTILPLMIATDKVCTVINIGSVAGEIAYPHGSIYCATKFAVKAISDSMRSELIDK KIKVTNIKPGLVDTEFSLIRFKGDKERADGVYGGIEPLYAEDIADTIAYVVNLPDKIQIT DLTVTPLHQANAIHIHREKNS >gi|292606571|gb|ADGG01000039.1| GENE 55 57643 - 58857 1479 404 aa, chain - ## HITS:1 COG:FN1434 KEGG:ns NR:ns ## COG: FN1434 COG0457 # Protein_GI_number: 19704766 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 41 367 79 436 657 193 38.0 6e-49 MDKMTKEYQEIFFEVKILPVEQLDIKRVEKLISAYITDKNYEEALEVLRVVEDREKNNPL INSEFGYCLVELKQFDEAIKYYLKAKNQGREDAWIYSQLGWAYRNAEKYKEALEAYLKAQ QLGDKVAWINAEIGMCYKELGNYDEALKYYLIIINSGELDNDIYKKTWVLLEIGNIYKNT NKFEEAVECFRIVEKIVVGDYQFYLDHAYCLIFMNHYTEAIAKIEKALELHEDIYPISQL AFCYRNLEEWEKALQYYLKAESLGREDAWINLEIGLCYKELLDFEKSLARYLKAYEDEIY KYNTFLLLEIARIYNIFDNYTEAFKFLVRVSEMSKKSKDVCIEMGKCLIGLGRYEEAIEN FLKARKLSLEVESSTYEEDKGLAYCYEVLGNNEKAKEYKKISNK >gi|292606571|gb|ADGG01000039.1| GENE 56 58867 - 61293 3145 808 aa, chain - ## HITS:1 COG:FN1434 KEGG:ns NR:ns ## COG: FN1434 COG0457 # Protein_GI_number: 19704766 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 155 808 1 657 657 759 66.0 0 MKTVEEILKKIDTLDNLEKYQEIIDMIEELPVEQLNNQIISEQGRAYNNIGEYEKAIEIL KTIETEERGTRRWNYRIAYSYYFLEDYENAEKYFLKANEIGPEDDEIKNYLLNIYIDLSK KHLNENKEEEAIEYALKAKDYITNDENKVHVYSYLAWMYDRIEAYDIAEDLLKSILNCKT DQRNEIWAYSELGYCLGEQHRYQESLEALIKASEMGRDDIWLNTQIGWTYRILGNYEEAL QYLFKAREMGRDDEWINAELGICYKETEKYEEALQYYLLANEQNGQKNIWVLSEIAWLYG VLDKYEDELKYLDRVKKLGRKDEWINAEYGKVHARIGKYEEALKYFRKAKKMGQDDAWIN IQMAICFKRLNKLKKALEYYLLAEKFKDYKKDIWLLSDIAWVYDGLGKYKEGLKYLKKVE KLGRKDCWLYTEYGFCLMRMKKYKEAITKYKKGLKLKEELNEEIFLNSQIGFCYRLLGSE KTALKYHLKARELGRNDAWINTELGICYKELDKYEKALECYLLAYKEEKEEIWLLSDIGW IFNELDKYEEALEFLLKAEELGRDDAWINAEIGQCLGRLEKLDEGIDRLKRALELLEEEK SNNTTEKIFINSEIGRLIGKKEISNPEEALHYLNIAKELGRDDIWINSEIAWELAYNDNK SEESIKYFEKAIKLGRKDEWIWSRVANVYFDLERIKDAFNAYSKAYKLAKKSWYICNIGR CLRKLGKYEEAVKKLVESRKLSLKEGDVVDLEDLELAYCYAALGDKKKAKKHMKLSMDSL GSRATDEEHLKKQFDEIKEMISVLSKPS >gi|292606571|gb|ADGG01000039.1| GENE 57 61445 - 62332 1320 295 aa, chain - ## HITS:1 COG:FN0322 KEGG:ns NR:ns ## COG: FN0322 COG3588 # Protein_GI_number: 19703667 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphate aldolase # Organism: Fusobacterium nucleatum # 1 295 1 295 295 538 94.0 1e-153 MNEKLEKMRNGKGFIAALDQSGGSTPKALKLYGVNEDQYSNEEEMFDLIHKMRTRIIKSP AFNEEKILGAILFEQTMDSKIDGKYTADFLWEEKRVLPFLKIDKGLNDLDADGVQTMKPN PGLADLLKKANERHIFGTKMRSVIKKASPAGIARVVDQQFEVAAQIVAAGLVPIIEPEVD INNVDKVECEEILRDEIRKHLNALPETSNVMLKLTLPTVENFYEEFTKHPRVVRVVALSG GYSREKANDILSKNKGIIASFSRALTEGLSAQQTDDEFNKTLAATIEGIYEASVK >gi|292606571|gb|ADGG01000039.1| GENE 58 62528 - 64351 2235 607 aa, chain - ## HITS:1 COG:FN0321 KEGG:ns NR:ns ## COG: FN0321 COG0326 # Protein_GI_number: 19703666 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Fusobacterium nucleatum # 1 606 1 606 607 944 90.0 0 MRKEEKIFKAETKELLNLMIHSIYTNKEIFLRELISNANDAIDKLKFQSLTNNELLKDDD KFKIEITVDKDNGTLTIKDNGIGMTYDEVDENIGTIAKSGSKVFKEQLEAAKKADIDIIG QFGVGFYSAFIVADKVTLETRSPYSENGVRWISSGDGNYEIEEISKENRGTEITLHLKDG EEYSEFLEEWKIKELVKKYSNYIRYEIYFKDEVINSTKPIWKRDKKELKDEDYNEFYKAT FHDWNDPLFHINLKVQGNIEYNALLFIPKKLPFDYYTKNFKRGLQLYTKNVFIMEKCEDL IPEYFNFISGLVDCDSLSLNISREILQQNSELQAISKNLEKKMISELEKILKNDREKYIE FWKEFGRCIKGGVQDMFGMNKEKLQDLLIFVSSYDDKYTTLKEYVDRMGENKEILYVPAE SIDAVKALPKMEKLKEQGREVLILTDKIDEFTLMAMRDYSGKEFKSINSSDFKLSDDKEK EEEVKKIADENKTLIEKAKEFLKDKVNEVELSNNIGNSASSLLAKGGLSLEMEKTLSEMT NNNDAPKAEKILAINPEHVLFDKLKAAEGTENFNKLVDVLYNQALLLEGFSIENPVEFIK NLNDLLV >gi|292606571|gb|ADGG01000039.1| GENE 59 64497 - 65039 768 180 aa, chain - ## HITS:1 COG:FN0320 KEGG:ns NR:ns ## COG: FN0320 COG1853 # Protein_GI_number: 19703665 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 1 180 1 180 180 295 86.0 3e-80 MTKKKIDVLDYSSKILKALSKGVLLTVKDDEKVNTMVISWGALGIEWNKVLFTTYIRENR YTKAILDKALNFTINIPLEKIDSKVFGIAGTKSGRNIDKIKEANLTLVDSDIISSPAIKE LPITLECKVLYKQKQVLENLPEDIVKKDYPQDVDGTFVGANRDPHTAYYAEIVAAYIIEE >gi|292606571|gb|ADGG01000039.1| GENE 60 65255 - 66025 997 256 aa, chain + ## HITS:1 COG:FN0761 KEGG:ns NR:ns ## COG: FN0761 COG1521 # Protein_GI_number: 19704096 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Fusobacterium nucleatum # 1 256 1 256 256 446 94.0 1e-125 MIIGIDIGNTHIVTGVYDDKGKLISTFRLATNDKMTEDEYFSYFNNITKFNNISIEKVDA ILVSSVVPNIIITFQFFARKYFKVEAIIVDLEKKIPFTFAEGINYTGFGADRIIDITEAM QKYPDKNLVIFDFGTATTYDVLKKGVYIGGGILPGIDMSINALYGNTAKLPRVKFTTPSS VLGTDTMKQIQAAIFFGYAGQIKHIIKKINEELGEEIFVLATGGLGRILSAEIDEIDEYD ANLSLKGLYTLYMLNK >gi|292606571|gb|ADGG01000039.1| GENE 61 66054 - 66428 576 124 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_1036 NR:ns ## KEGG: SSUBM407_1036 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_BM407 # Pathway: not_defined # 17 124 6 113 117 152 65.0 4e-36 MGIFDEKIAENLKVHKYEPPRHIVDFHVAGFAYYDGLDVINELSLGQAVTLVVETDNPYD NEAVAIYYKDKKLGYVPKEKNSFLSTLLYYGYGDILEARIQYVNVENHPERQFRVVVKIK DNRK >gi|292606571|gb|ADGG01000039.1| GENE 62 66496 - 66849 243 117 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0189 NR:ns ## KEGG: Vpar_0189 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 101 1 101 107 152 69.0 3e-36 MNNLDFTFICLVTFFSKKRKTPPNLTNGKYNPHLVIKGDTEYLGVTFIDGEEVVFDKEIM ASALPLYEEIDYSALTEGTKFMIMEGGNIVGEGIVNEVFQHISAKELKKRLLQINKK >gi|292606571|gb|ADGG01000039.1| GENE 63 66891 - 67025 132 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262067237|ref|ZP_06026849.1| ## NR: gi|262067237|ref|ZP_06026849.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 44 1 44 44 64 97.0 2e-09 MEILDKKSNRMSRTNAGVSERSEFPDFLEALSNLLLRASYDADS >gi|292606571|gb|ADGG01000039.1| GENE 64 67099 - 68124 679 341 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Slackia heliotrinireducens DSM 20476] # 2 316 439 763 781 266 42 3e-70 MIILGIESSCDETSIAVVRDGKEILSNNISSQIEIHKEYGGVVPEIASRQHIKNIATVLE ESLAEAKITLDDVDYIAVTYAPGLIGALLVGLSFAKGLSYARNIPIIPVHHIKGHMYANF LEHEVELPCISLVVSGGHTNIIHIDENHKFTNIGETLDDAVGESCDKVARVLGLGYPGGP VIDKMYYKGDRNFLKITKPKVSRFDFSFSGIKTAIINFDNNMKMKNQEYKKEDLAASFLG TVVDILCDKTLDAAIEKNVKTIMLAGGVAANSLLRSQLTEKAAEKGIKVIYPSMKLCTDN AAMIAEAAYYKLKNAKNEEDCFAGLDLNGIASLMVSDEKAI >gi|292606571|gb|ADGG01000039.1| GENE 65 68121 - 68696 517 191 aa, chain - ## HITS:1 COG:FN0548 KEGG:ns NR:ns ## COG: FN0548 COG2137 # Protein_GI_number: 19703883 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 61 190 1 130 130 180 90.0 2e-45 MRIQVKTVTIKGNKLFLENDKIIYLTKEMIAKFDLNGKTCLDDKTFYSLIYFRIKLSAYN MLVKRDYFKKELKNKLIEKIGFADIVEDVVEDFEEKGYLDDYEKAKSYASQHSNYGAKKL SFIFYQMGVDRETISEILEDDKDNQIEKIKQLWYKLGNKEKQKKIESILRKGFLYGDIKK AISSIEEEEEE >gi|292606571|gb|ADGG01000039.1| GENE 66 68665 - 69804 1878 379 aa, chain - ## HITS:1 COG:FN0547 KEGG:ns NR:ns ## COG: FN0547 COG0468 # Protein_GI_number: 19703882 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Fusobacterium nucleatum # 8 379 11 381 381 554 91.0 1e-157 MAAKKDKNTPDSKITDKEGKQKAVNDAMAAITKGFGAGLIMKLGEKSSMNVESIPTGSIN LDIALGIGGVPKGRIIEVYGAESSGKTTLALHIIAEAQKQGGTVAFIDAEHALDPVYAKA LGVDIDELLISQPDYGEQALEIADTLVRSGAIDLIVIDSVAALVPKAEIDGEMSDQQMGL QARLMSKGLRKLTGNLNKYKTTMIFINQIREKIGVTYGPTTTTTGGKALKFYASVRLEVK KMGTVKQGDDPIGSEVVVKVTKNKVAPPFKEAAFEILYGKGISRVGEIIDAAVARDVIVK AGSWFSFREQSIGQGKEKVRIELESNPELLAQVEADLKEAISKGPVDKKKKKSKKELASD DVDTDDAELDEDSSEDSND >gi|292606571|gb|ADGG01000039.1| GENE 67 69809 - 70819 851 336 aa, chain - ## HITS:1 COG:FN0546 KEGG:ns NR:ns ## COG: FN0546 COG0859 # Protein_GI_number: 19703881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 335 1 335 335 559 88.0 1e-159 MENRKRILVIRLSSIGDVILTTPVLKAFKEKYPESIIDFLVIDKFKDAISLSPYVDNLLL FNKEKNDGLSNLIKFAKELSKNEYDYVFDLHSKFRSKIITFILSKFYKVKSYTYKKRAFW KSILVNLKLIKYEVDNTIIKNYFSAFKDFGLKYQGEDLNFSFEPELKNKFEEYKNAIVFA VGASKETKKWTVEGFGKLAKKLYETYGKKIILVGGKEDYERCDTIEKISENSVVNLAGKL SLKETGALLSQARFLLTNDSGPFHIARGVGCKTFVIFGPTSPGMFDFGENDILVYNKIEC TPCSLHGDKVCPKKHFKCMKELSYEKVFKIIESKEW >gi|292606571|gb|ADGG01000039.1| GENE 68 70821 - 71225 371 134 aa, chain - ## HITS:1 COG:no KEGG:FN0545 NR:ns ## KEGG: FN0545 # Name: not_defined # Def: lipopolysaccharide core biosynthesis protein RfaY # Organism: F.nucleatum # Pathway: not_defined # 1 134 65 198 198 210 89.0 1e-53 MKKINSLGLKTAKPVFYNKEYLMYEYIEGNEPTIDDIDLVVKELKKIHSMGYLHGDSHIN NFLISPEKEVYIIDSKFQKNKYGKFGEIFEMMYLEDSVGIEIDYDKKSFYYKGAMLLRKY LTFFSKLKNIIRGK >gi|292606571|gb|ADGG01000039.1| GENE 69 71415 - 72446 938 343 aa, chain - ## HITS:1 COG:FN0544 KEGG:ns NR:ns ## COG: FN0544 COG0859 # Protein_GI_number: 19703879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 342 1 341 342 599 91.0 1e-171 MNILIIHTAFIGDIVLSTALVSKVKEKYPDSDIYYLTTPLGKEILKNNPKIKEIITYDKR GKDKGFKAFVSFVRKIRKLKIDVCLTPHRYLRSSVLSFLSGAKIREGYDIANLAFLFNKK IKYDKTKHEVEKLLSFVDDNNTKRYELEMYPDENDKIKIDSLLKNLLDNKKIILIAPGSK WFTKKWPEEYFRTLIQNLVKRDDLLIVITGGKEEKEINLELDSKVLDLRGEISLLELAEL TKRATLVVSNDSAPIHVTSAFPNTRIIGIFGPTVKEFGFFPWSQNSKVFEIDNLYCRPCA IHGGNSCPEKHFRCMREITPDLIENEIYNYIASTDDKKVKANE >gi|292606571|gb|ADGG01000039.1| GENE 70 72443 - 73462 981 339 aa, chain - ## HITS:1 COG:FN0543 KEGG:ns NR:ns ## COG: FN0543 COG0859 # Protein_GI_number: 19703878 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 339 7 345 345 567 87.0 1e-162 MEIKRILVSRTDKIGDLILSIPSFFMIKKMYPNAELVAIVRKYNMDIVKNLPYIDRFVII DDYTKAELLEKIAYFKADVFIALYNDSYIAALARASKAKIRIGPISKLNSFFTYNKGVLQ KRSRSVKNEGQYNLDLVAKLDKKKFSILYELNTKLVLTDDNRKVADTFFKENSIEGKCLV VNPFIGGSAKNITDEQYVSILKKVKEEMPDLNIIVTSHISDEERNEKFCKDIGKDKVFSF SNGASILNTASIIDRADVYFGASTGPTHIAGALGKRIVAIYPNKKTQSTTRWGIFGNSNV EYIVPDENNPNEDYKNPYFDNFTEEMEDKVVKKILEGLK >gi|292606571|gb|ADGG01000039.1| GENE 71 73628 - 73843 64 71 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 1 70 346 415 416 103 75.0 3e-21 DEIPIYDKENLQEYVFSGKRIKRGLYQTSGGKLINADCNGALNILRKSKVVDLSVLYNRG ELNTPKRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 22:02:19 2011 Seq name: gi|292606570|gb|ADGG01000040.1| Fusobacterium sp. 1_1_41FAA cont1.40, whole genome shotgun sequence Length of sequence - 40160 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 10, operones - 8 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 278 - 979 761 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2 1 Op 2 . - CDS 996 - 2102 954 ## COG0726 Predicted xylanase/chitin deacetylase 3 1 Op 3 . - CDS 2146 - 3204 1085 ## COG3180 Putative ammonia monooxygenase - Prom 3339 - 3398 10.8 - Term 3288 - 3324 0.3 4 2 Op 1 . - CDS 3407 - 3664 330 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 5 2 Op 2 . - CDS 3742 - 4842 1007 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 4930 - 4989 10.9 + Prom 4831 - 4890 7.9 6 3 Op 1 1/1.000 + CDS 4958 - 6145 1807 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 7 3 Op 2 1/1.000 + CDS 6187 - 7530 1561 ## COG1757 Na+/H+ antiporter + Prom 7547 - 7606 7.0 8 3 Op 3 . + CDS 7626 - 11192 4652 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 11217 - 11261 10.1 - Term 11203 - 11247 6.1 9 4 Op 1 . - CDS 11264 - 11980 843 ## FN1719 hypothetical protein 10 4 Op 2 1/1.000 - CDS 12020 - 14650 3831 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 11 4 Op 3 . - CDS 14709 - 16799 2722 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 12 4 Op 4 1/1.000 - CDS 16865 - 17896 1024 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 13 4 Op 5 . - CDS 17896 - 18600 800 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 18643 - 18702 12.2 - Term 18924 - 18962 0.5 14 5 Op 1 2/0.000 - CDS 18995 - 19249 240 ## COG3328 Transposase and inactivated derivatives - Prom 19320 - 19379 8.0 15 5 Op 2 . - CDS 19430 - 19822 605 ## COG3328 Transposase and inactivated derivatives - Prom 19954 - 20013 6.7 16 6 Tu 1 . - CDS 20046 - 20822 884 ## SCO6631 hypothetical protein - Prom 20852 - 20911 5.4 - Term 21209 - 21259 1.9 17 7 Op 1 7/0.000 - CDS 21367 - 22026 862 ## COG1299 Phosphotransferase system, fructose-specific IIC component 18 7 Op 2 10/0.000 - CDS 22108 - 23238 1540 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 19 7 Op 3 10/0.000 - CDS 23228 - 24157 1347 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) - Prom 24182 - 24241 3.6 20 7 Op 4 . - CDS 24272 - 25006 815 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 25040 - 25099 9.9 - Term 25287 - 25330 8.7 21 8 Op 1 . - CDS 25336 - 25578 244 ## FN1193 hypothetical protein - Term 25599 - 25634 4.2 22 8 Op 2 . - CDS 25648 - 25920 497 ## FN1192 hypothetical protein 23 8 Op 3 . - CDS 25981 - 26733 869 ## FN1191 hypothetical protein 24 8 Op 4 . - CDS 26746 - 28953 2620 ## COG2217 Cation transport ATPase 25 8 Op 5 . - CDS 28957 - 29343 482 ## FN1189 hypothetical protein 26 8 Op 6 . - CDS 29357 - 29851 603 ## FN1188 hypothetical protein - Prom 29891 - 29950 11.6 27 9 Tu 1 . - CDS 29970 - 30497 514 ## Coch_0117 hypothetical protein - Prom 30636 - 30695 13.2 + Prom 30592 - 30651 12.8 28 10 Op 1 . + CDS 30877 - 31629 899 ## FN1183 putative cytoplasmic protein 29 10 Op 2 . + CDS 31619 - 33163 1562 ## FN1182 hypothetical protein 30 10 Op 3 . + CDS 33176 - 34060 1360 ## COG1857 Uncharacterized protein predicted to be involved in DNA repair 31 10 Op 4 . + CDS 34071 - 35150 1113 ## CTC01145 hypothetical protein 32 10 Op 5 6/0.000 + CDS 35161 - 37662 2695 ## COG1203 Predicted helicases 33 10 Op 6 12/0.000 + CDS 37634 - 38206 491 ## COG1468 RecB family exonuclease 34 10 Op 7 13/0.000 + CDS 38218 - 39210 781 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 35 10 Op 8 . + CDS 39215 - 39493 267 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair Predicted protein(s) >gi|292606570|gb|ADGG01000040.1| GENE 1 278 - 979 761 233 aa, chain - ## HITS:1 COG:FN0542 KEGG:ns NR:ns ## COG: FN0542 COG0463 # Protein_GI_number: 19703877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 233 5 237 263 402 87.0 1e-112 MTLTVSIITLNEEKNLERTLKSVQDFADEIVIVDSGSTDKTEEIAKKFGAKFVYQEWLGY GAQRNKAIDLATSDWVLNIDADEEISPELAKRIKAIKENSRYKVYKINFMSVCFNKKIKH GGWSNSYRIRLFRKDAGRFNENSVHEEFETTQEIAKLHKFIYHHTYSNLADYFDRFNKYT TLGAIEYYKKGKKASIISIVLSPIYKFLRMYIVRLGFLDGLEGFLLATTSSLY >gi|292606570|gb|ADGG01000040.1| GENE 2 996 - 2102 954 368 aa, chain - ## HITS:1 COG:FN0541 KEGG:ns NR:ns ## COG: FN0541 COG0726 # Protein_GI_number: 19703876 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Fusobacterium nucleatum # 20 368 2 351 351 521 82.0 1e-148 MKGKKMIITLIILTIIMFFIIIFNKRAVPAFLYHQVNPISNVSPELFEEHLKVIKEYKMN TITISEFYNKEVPTNSILLTFDDGYFDNYKYVFPLLKKYNMKATIFLNTLYIMDKRETEP EIKDNNTVNLEAMKEYIKSGKATINQYMSWEEIKEMYDSSLIDFQAHSHKHMAMFVDTKI EGLTNKNRMEAPELYLYGELEDNFPSFPKRGEYTGKAILIKKEFFKIFKEFYEKNIENKV TDKNEVLKKSQEFIDENKEYFSIESEAEYRKRIEEDFSENKKIIEKNLGNEVKFFCWPWG HRSKETIKVLKELGVVGFISTKKGTNSIKANWNMIRRIELRNYSVKKFKINLLLARNLIL GKIYGWIS >gi|292606570|gb|ADGG01000040.1| GENE 3 2146 - 3204 1085 352 aa, chain - ## HITS:1 COG:FN0532 KEGG:ns NR:ns ## COG: FN0532 COG3180 # Protein_GI_number: 19703867 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Fusobacterium nucleatum # 5 352 2 349 351 434 81.0 1e-121 MNGNEIIFLILTLAIGILGGYLANKKKVPAAFMIGALFAVAIFNIFTDRAFLPTSFKFIT QVATGTFIGSKFRAKDVKMLRKVIIPGMVMVVLMIAFSFVLSFIMSHFLGIDYMTSFFAT APGGIMDISLIAYDFKANTSQVALLQLIRLISVISFVPFFTKKCYEKSKDKKVNFEKEIK NEIDEEEKILIKTEKSFTFTLVIGIIGGIIGYFSHLPAGTMSFAMAFVAFFNVRTQKAYM PLPLRKIIQTFGGALIGARVTLADVVALKTLVLPIILIIIGFCLMNVLVGFFLYKTTKFS LSTALLSASPGGMSDISLMAEDLGANGPQVASMQFLRAIFIVGVYPLIIKLL >gi|292606570|gb|ADGG01000040.1| GENE 4 3407 - 3664 330 85 aa, chain - ## HITS:1 COG:FN1418 KEGG:ns NR:ns ## COG: FN1418 COG1167 # Protein_GI_number: 19704750 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 1 79 394 472 475 136 77.0 1e-32 MHLPQGGFFIWTKLANYINSEKFYYKCRLRGLSILPGFVFYSNSEEVSTKIRISTVSSTI EEVERGLDIIQDVLNNCDFSEINLK >gi|292606570|gb|ADGG01000040.1| GENE 5 3742 - 4842 1007 366 aa, chain - ## HITS:1 COG:FN1418 KEGG:ns NR:ns ## COG: FN1418 COG1167 # Protein_GI_number: 19704750 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 1 359 1 359 475 577 81.0 1e-164 MNKKLVRNSDTTISTQLFEILKQDILENRWKENDKFFSVRQISIKYGLNPNTVLKVIKAL EEEGYLYSVKGKGCFIKKGYNLDISQRMTPILNTFRFGQISKDMEINFSNGGPPKEYFPI QEYKEILSEILLDKNEGRELMAYQNIQGLESLRETLVEFIKRYGIRREKDDIIICSGTQI ALQLISTTFGLVPKKTILLSDPTYQNAVNILKNYCNIENIDMKNDGWDMNEFENLLKNKR IDFVYIMTNFQNPTGVSWSFEKKKKMIELSIKYDFYIIEDECFSDFFYKSQNYPRPIKTL DKDERVFYIKTFSKIVMPSLALTMLIPPKKYTESFSLNKYFIDTTTSGINQKFLELYIKE VYWINI >gi|292606570|gb|ADGG01000040.1| GENE 6 4958 - 6145 1807 395 aa, chain + ## HITS:1 COG:FN1419 KEGG:ns NR:ns ## COG: FN1419 COG0626 # Protein_GI_number: 19704751 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Fusobacterium nucleatum # 1 395 1 395 395 734 91.0 0 MENKKCGLGTTAIHAGTLKNLYGTLAMPIYQTSTFIFDSAEQGGRRFALEEAGYIYTRLG NPTTTVLEDKIAALEEGEAAVATSSGMGAISSTLWTILKAGDHIVTDKTLYGCTFALMCH GLTRFGIDVTFVDTSNLDEVKNAMKENTRVVYLETPANPNLKIVDIEALAKLAHTNPNTL VIVDNTFATPYMQKPLTLGADIVVHSVTKYINGHGDVIAGLVITNKALADQIRFVGLKDM TGAVLGPQDAYYIIRGMKTFEIRMERHCKNARRVVEFLNNHPKIERVYYPGLETHPGYEI AKKQMKDFGAMISFELKGGFEAGKTLLNSLKLCSLAVSLGDTETLIQHPASMTHSPYTKE EREAAGITDGLVRLSVGLENVEDIIADLEQGLEKI >gi|292606570|gb|ADGG01000040.1| GENE 7 6187 - 7530 1561 447 aa, chain + ## HITS:1 COG:FN1420 KEGG:ns NR:ns ## COG: FN1420 COG1757 # Protein_GI_number: 19704752 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 5 444 1 440 445 699 91.0 0 MENKIENKASFKGLIPFLVFILLYLGTGIFLNIQGVELAFYQLPGPVAAFAGIVIAFIIF RGTITEKFNTFLEGCGHPDIITMCIIYLLAGAFAIVSKAMGGVDSTVNLGITYIPPHYIA VGLFIIGAFISTATGTSVGAIVALGPIAVGLGEKSGVPMPLILAAVMGGAMFGDNLSVIS DTTIAATKTQGVEMKDKFRINSYIALPAAILTIILLFIFARPDVVPEAVSHEYNLLKVLP YVFVLVMALVGVNVFVVLTSGILLSGIIGFIYGDFTLLSYGKEIYNGFTNMTEIFVLSLL TGGMAQMVTREGGIDWVINTVQKFIVGKKSAKLGIGLLVSLADIAVANNTVAIIITGGIS KKISENNKVDLRESAAFLDIFSCVFQGMIPYGAQMLILLGFAGDKVSPTQLIPLLWYQLL LAVFTIIYIAVPQISNKTLSFIDKKQS >gi|292606570|gb|ADGG01000040.1| GENE 8 7626 - 11192 4652 1188 aa, chain + ## HITS:1 COG:FN1421_1 KEGG:ns NR:ns ## COG: FN1421_1 COG0674 # Protein_GI_number: 19704753 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Fusobacterium nucleatum # 1 410 3 412 412 826 97.0 0 MKRVMQTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYVDEWAAKGMKNIFDVPVKLVE MQSEGGAAGTVHGSLEAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARSLSVQA LSIFGDHQDIYATRQTGFTMMASGSVQEVMDMGTIAHLTAIKSRVPILHFFDGFRTSHEI QKIELMDFDVCKKLVDYDEIQKFRDRALNPEHPVTRGTAQNDDIYFQTREAQNKFYDAVP DIAAYYMEEISKETGREYKPFKYRGAADADRVIIAMASVCQTAEETVDYLVEKGEKVGLI TVHLYRPFSEKYFFNVLPKTVKKIAVLERTKEQGAPGEPLLLDVKSIFYDKENAPIIVGG RYGLSSKDTTPAQIKAVFDNLSQDKPKTNFTVGIVDDVTFTSLEVGERLNVADPSTKACL FFGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKKPIRATYLV SSPSFVACSVPAYLKQYDMTSGLKKGGKFLLNCVWDKDEVLENIPDNIKYDLAKAEAKFY IINATKLAHEIGLGQRTNTIMQSAFFKLAEIIPYEEAQKYMKEYAFKSYGKKGDDVVQLN YKAIDVGASGLIEIEVNPEWINLKVSAQEKVDKNNDTSNCKTELLTSFVKNIVEPINAIK GNDLPVSAFIGREDGTFENGTAAFEKRGVAVDVPIWNLDKCIQCNQCSYVCPHAAIRAFL ITDEEKVASPIEFSTLKANGKGLENLSYRIQVTPLDCTGCGSCANVCPAKALDMNPIAVA LENQEDKKASYIYSKVSYKNDKLPTNTVKGSQFSQALFEFNGACPGCGETPYLKVISQMF GDRMMVANASGCSSVYSGSAPSTPYTKNCCGEGPAWASSLFEDNAEYGFGMHVGVEALRD RIQHIMEVSMDKVTPALQGLFHEWIENRCFAAKTREITPKILAALEGNNESYAKDIIGLK QYLIKKSQWVVGGDGWAYDIGYGGLDHVLASKEDINVIVMDTEVYSNTGGQSSKATPTAA VAKFAAAGKPLKKKDLAAICMSYGHIYVAQVSMGANQQQFLKAIQEAESYNGPSIIIAYS PCINHGIKKGMSKSQTEMKLATECGYWPIFRYNPLLESQGKNPLQLDCKEPKWELYQDYL MGETRYMTLKKTNPDEANELFEKNMWDAQRRWRQYKRLASLDFSDEKR >gi|292606570|gb|ADGG01000040.1| GENE 9 11264 - 11980 843 238 aa, chain - ## HITS:1 COG:no KEGG:FN1719 NR:ns ## KEGG: FN1719 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 238 1 239 239 345 74.0 1e-93 MIFTLVSCSSTTNKKDLIQKYSLDKEAAHNWETVMPNVMANEATNPDWYGEDNPLVSLRK QGKMSEKEFYFLDYLGKTPANEITDDEFDRFAKILTSFVNRTPRKFILEETNIKDPKGLV DFMVKESNSTQLDNPSKYIKEVVADKDEWSQIVALSEKSDLNDKDVRKLRKLLATFVKRD NFFNEDVWLQVEVSDRVLYLAQMSRKIPKTKMELNNVNAKALYLAYPQFLSKIDRWSR >gi|292606570|gb|ADGG01000040.1| GENE 10 12020 - 14650 3831 876 aa, chain - ## HITS:1 COG:FN1718 KEGG:ns NR:ns ## COG: FN1718 COG0653 # Protein_GI_number: 19705039 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Fusobacterium nucleatum # 1 876 1 869 869 1439 86.0 0 MIGGLLKKIFGTKNDREVKALTKIVDQINALEPEYEELSDEELREKTDIFKERLENGETL DDILIEAFATVREASKRVLGLRHYDVQLIGGIVLHQGKITEMKTGEGKTLVATCPVYLNA LAGKGVHVITVNDYLAKRDRDQMSRLYGFLGLSSGVILNGLPTEQRKRSYESDITYGTNS EFGFDYLRDNMVSDMKNKVQRELNFCIVDEVDSILIDEARTPLIISGAAEDKIKWYQVSF QVVSMLTRSYETEKIKNIKEKKAMNIPNEKWGDYEVDEKSRTVVLTEKGVKRVEKILKID NLYSPEHVELTHFLNQALKAKELFKRDRDYLVRENGEVVIIDEFTGRAMEGRRYSDGLHQ AIEAKEGVNIAAENQTLATITLQNYFRMYKKLSGMTGTAETEATEFMHTYGLEVIVIPTN LPVIRRDNADLVYKTKNGKIKSIIDRIEGLYEKGQPVLVGTISIKSSEELSELLKKRGVP HNVLNAKFHAQEAEIVAQAGRYKAVTIATNMAGRGTDIMLGGNPEFMALDEVGSRDDERF PEVLAKYQEQCKIEKEQVLALGGLFILGTERHESRRIDNQLRGRSGRQGDPGESEFYLSL EDDLMRLFGSERVSVWMERLKLPEDEPITHGMINSAIEKAQKKIEARNFGIRKSLLEFDD VMNLQRKAIYENRNEALGTDNLKDKILGMLKDTITAKVYEKFAAEHKEDWDIDGLNEYLE DFYVYEEEDEKAYLKDTKEGYIERIYNALVSQYNKKEEEIGSGLLRNLEKYILFEVVDNK WREHLKALDGLRESIYLRAYGQRDPVTEYKIISSQIFEEMISNIKEQTTSFLFKVAVKTE EERQSVEEFEEDVKKIDSEDSCPCGSGKPYNKCCGR >gi|292606570|gb|ADGG01000040.1| GENE 11 14709 - 16799 2722 696 aa, chain - ## HITS:1 COG:FN1717 KEGG:ns NR:ns ## COG: FN1717 COG0272 # Protein_GI_number: 19705038 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Fusobacterium nucleatum # 1 696 1 696 696 1122 90.0 0 MKIKERIEELKNSNAGLTLYSSQELKDLERIVKLKEDLDKYRDSYYNDNESLISDYEFDI LLKELESLEEKYPEYKEASSPTESVGASLKENKFKKVEHEHPMLSLANSYNIGEVVDFIE RIKKRISKEQELKYCLEVKLDGLSISLTYIQGKLVRAVTRGDGFIGEDVTENILQIASVV KTLPQAIDIEIRGEIVLPLASFEKLNKERLEKGEELFANPRNAASGTLRQLDPEIVKERA LDAYFYFLVEADKLGLKSHSESMKFLESMGIKTTGIFELLENSKDIEKRIDYWEKERENL PYETDGLVIKVDEINLWDEIGYTSKTPRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPV AELEEVELSGSKVKRASLHNISEIQRKDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEK TIEEPINCPVCNHKLEREEGLVDIKCVNEECPAKIQGEIEYFVSRDALNIMGLGSKIVEK FIDLGYIKTVVDIYDLKNHREELENIDKMGKRSIENLLNSIEESKNREYDKVIYALGIPF IGKVASKVLAKASKNIDKLMSMTFEELTSIEGIGEIAANEIIVFFKKEKTQKLVAALKEK GLKFEIAESEIKVENLNPNFAGKNFLFTGTLKHFTREQIKEEIEKLGGKNLSSVSKNLDY LIVGEKAGSKLKKAQEIPTIKILTEEEFIELKDKFD >gi|292606570|gb|ADGG01000040.1| GENE 12 16865 - 17896 1024 343 aa, chain - ## HITS:1 COG:FN1920 KEGG:ns NR:ns ## COG: FN1920 COG0482 # Protein_GI_number: 19705225 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 1 343 1 343 343 580 88.0 1e-165 MKKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDRLGIIHEV VNIRKDFENIVIKYFLDGYKSGKTPSPCVICDDEIKFKILFEIADKYKADYVATGHYTSV EYSETFSKYLLKSVHSIIKDQSYILYRLAPEKLERLIFPLKPYSKQEIREIALKIGLEVH DKKDSQGVCFAKEGYKEFLKENLKDEIVKGNYIDKEGKILGQHEGYQLYTIGQRRGLGIN LSKIVFITEIRAKTNEIVLGEFSELFTDEIELTNYKFAVKFEKLEDLNLLARPRFSSTGF YGKLIKNNDKIYFKYNEENAHNAKGQHVVFFYDNFVVGGGEIK >gi|292606570|gb|ADGG01000040.1| GENE 13 17896 - 18600 800 234 aa, chain - ## HITS:1 COG:FN1921 KEGG:ns NR:ns ## COG: FN1921 COG0340 # Protein_GI_number: 19705226 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Fusobacterium nucleatum # 1 234 1 234 234 385 85.0 1e-107 MKFLKFNEIDSTNNYMKENISSFENYDIVSAKVQTAGRGRRGNSWLSPEGMALFSFLLRP ERSLSMVEATKLPFIAGISTLNALKKIKDGAYSFKWTNDVFFNSKKLCGILIERVKDDFV VGIGINVANKIPEDIKNIAISLESDYDIDKLILKVVEEFSLYYEKFMSGKWQEIVEEINR NNFLKDKKIRVHIGEQIFEGTAKNIAEDGRLEIEMNGEIKLFSVGEITIEKDYY >gi|292606570|gb|ADGG01000040.1| GENE 14 18995 - 19249 240 84 aa, chain - ## HITS:1 COG:ECs2221 KEGG:ns NR:ns ## COG: ECs2221 COG3328 # Protein_GI_number: 15831475 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 3 84 197 278 289 75 41.0 3e-14 MTSWYQNWYVLIPIFKFSLEVRKVIYTTNAIESLNSTYKKLNRQRTVYPSDKALLKALYL STLETTKKWTQPLRNWEKYIENLV >gi|292606570|gb|ADGG01000040.1| GENE 15 19430 - 19822 605 130 aa, chain - ## HITS:1 COG:ECs2221 KEGG:ns NR:ns ## COG: ECs2221 COG3328 # Protein_GI_number: 15831475 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 19 130 18 133 289 106 40.0 1e-23 MKEKKEVYKVKLLTEGKKNIIATLIQEYDIKTAEDIQDWQNRPLEKVYPVIFIDATREDN RIKKIAAYVVLGIIKDGMKEVLSLEIGENESSKYWLGVLNALKNRGVNDIMVICADGLTG IKEAIATAFP >gi|292606570|gb|ADGG01000040.1| GENE 16 20046 - 20822 884 258 aa, chain - ## HITS:1 COG:no KEGG:SCO6631 NR:ns ## KEGG: SCO6631 # Name: SC4G2.05 # Def: hypothetical protein # Organism: S.coelicolor # Pathway: not_defined # 5 241 13 250 291 238 51.0 2e-61 MENIKFETMLLETTKLPMVKIDRESFLRKELQNRYTKEIVEKAIQYNPAYAGICVEDINK IAKSCITAETMKVSTISATAGLPGGLAIIGTIPADLAQYFGHILRILQKLLYLYGWSDLG LTSRELNDETMNLLTLFIGVMFGVNGAVGTINKLAVQVAKQIAKKLPQKALTKGMIYPIV KKIATLLGIKMTKQIFAGGVAKVIPILGAFISGGMTFISFKPMSEKLRKYLETTKLASVE YYKKMSLETIIVEETTDI >gi|292606570|gb|ADGG01000040.1| GENE 17 21367 - 22026 862 219 aa, chain - ## HITS:1 COG:FN1441_3 KEGG:ns NR:ns ## COG: FN1441_3 COG1299 # Protein_GI_number: 19704773 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Fusobacterium nucleatum # 1 219 110 328 328 341 91.0 7e-94 MSKQFDGMKSMVIYPIFSLVITGVLMYFIIGPIFTKINVIVANWLNNMGTANAVLLGAVL GGMMSVDMGGPINKAAYAFSIGVFTDTNNGAFMAAVMAGGMVPPLAIALAMTLFKDRFDE KEQQSKISNFILGLSFITEGAIPFAAKEPLKVISSCVVGAAIAGGLTQFWGVSAPAPHGG IFVIPAMPSVHSAIFFVVSIIIGTIVSGVIFGILRGKKK >gi|292606570|gb|ADGG01000040.1| GENE 18 22108 - 23238 1540 376 aa, chain - ## HITS:1 COG:FN1441_1 KEGG:ns NR:ns ## COG: FN1441_1 COG1762 # Protein_GI_number: 19704773 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Fusobacterium nucleatum # 14 165 1 152 153 263 90.0 3e-70 MEIKDLLKKDLMIMDLKANTKMEAIDEMIARLKEKNIVSDADVFKNLILKREERSSTGLG EGIAMPHAKTSVVNSPSVLFARSNKGVDYDALDGEPVHIFFMIAASEGAHDLHIETLAKL SKMLLNDDFTKGLLTCGSPDEVYALVDKYSEKPQESPKEEVKETQVTNKKRILAVTACPT GIAHTYMAEAALKEAGEKLGVDVKVETNGADGIKNNLTANDIDEAVGIIVAADKKVETAR FNDRKVIVTSTADAIKNAEALIKKVLNNEVPVFKAEASDNTEEDSQANDSIGRIIYKSIM NGVSNMLPFVIGGGILLALSFIVERFMGQNELFKLLYGVGGGAFHFLIPVLAGFIAMSIA DKPGFMPGAVAGYMAS >gi|292606570|gb|ADGG01000040.1| GENE 19 23228 - 24157 1347 309 aa, chain - ## HITS:1 COG:FN1440 KEGG:ns NR:ns ## COG: FN1440 COG1105 # Protein_GI_number: 19704772 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Fusobacterium nucleatum # 1 309 6 314 314 492 86.0 1e-139 MIYSVTLNPSIDFIVRVKDFQIGETNRAYEDNFFAGGKGIMVSKLLKNVGTECVNLGFLG GFTGAFIEENLKRLNIPSDFVTVEENTRINVKLKTEEETEINCPGPKISEKEKEEFLDKI RKIKSDDFVILSGSVPSNLGNDFYINIIEILNENSVKFTLDSSGETFKKSLKYKPFLIKP NKDELKEYAKREFKDNKEIIDYVRANLVGMAENVIISLGGEGALYIAKDFSLFAQPFKAK ESVVNTVGAGDSVVAGFVNYMLKENDVEKAFRFAVACGTATSFSEDIGELEFIEEISKKL VIEKEHYGN >gi|292606570|gb|ADGG01000040.1| GENE 20 24272 - 25006 815 244 aa, chain - ## HITS:1 COG:FN1439 KEGG:ns NR:ns ## COG: FN1439 COG1349 # Protein_GI_number: 19704771 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Fusobacterium nucleatum # 1 243 1 243 245 361 91.0 1e-100 MLFEDRISLILKLIETQGSIENSKIIKDLKISEATLRRDLAYLEKENKIKRVRGGAVLRK VARKEIEIKEKITNKDSKKKIAQVAAQFISDGDYIYLDAGTTTYEIIDYMKGKDIKVVTN GIIHLERLIANDIETYLIGGRIKKSTLAIVGVKALRDLSEFRFDKAFIGINGINENGYST HDVEEALIKKQAIENSNKAFILADSTKFDMIYFANVAKLEEATIITDKKEINKDIIKNTK IINV >gi|292606570|gb|ADGG01000040.1| GENE 21 25336 - 25578 244 80 aa, chain - ## HITS:1 COG:no KEGG:FN1193 NR:ns ## KEGG: FN1193 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 79 4 82 89 123 79.0 2e-27 MKDIDVLYKGEVLKLTRFWGNNKLCLWIKNPNQITMPKMEFVGGYPNEYCIFLEKLSVEE LKEIKTVDGKVLNLEEIKNN >gi|292606570|gb|ADGG01000040.1| GENE 22 25648 - 25920 497 90 aa, chain - ## HITS:1 COG:no KEGG:FN1192 NR:ns ## KEGG: FN1192 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 90 1 90 90 117 90.0 1e-25 MFGNTITKDHLVGAAVGVGVAAVAFYLYKKNQAKVDDFLRKQGINIKTSSCSNLEGLDIE GLTEMKEHIEDLIAEKSATESAEEIIVEAE >gi|292606570|gb|ADGG01000040.1| GENE 23 25981 - 26733 869 250 aa, chain - ## HITS:1 COG:no KEGG:FN1191 NR:ns ## KEGG: FN1191 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 250 1 243 243 410 90.0 1e-113 MKKLTITIVHILPNRVRLKLSAPVKDAKTFYSNIKNNLKFLEMRYNSRLKTVTLNFSPSE IFLQEIIYRVAISFSIENGLLPVKLVEENVYKSISPLSMYALASIMVSYLNGVINKNDTN LQSSMNVFSMGLTAGSVFEHAYGEVKKRGMFDIEILPALYLLKSFFTEQKLSTVLIMWLT TFGRHLTVSHKMTKLIKVFRVKTEKGYQYTATIIDDNTIENFSDFIHQIFFKKHIDYCQF NEKYVTLSKN >gi|292606570|gb|ADGG01000040.1| GENE 24 26746 - 28953 2620 735 aa, chain - ## HITS:1 COG:FN1190 KEGG:ns NR:ns ## COG: FN1190 COG2217 # Protein_GI_number: 19704525 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 1 735 1 735 735 1229 94.0 0 MKNDNLLACEIVHRIRGRIRIKSKAFKYIGASLKTEIEKQLVQVRYIESVEISLITGTIL IYFEDVSLSEQNLINLIQNTLNSHIFEICKNEKIEKSSKYVIERKLQEETPGEIIKKIIT TAGLLGYNLFFKSKQEVVTTGIRRFLNYNTLSTLALAMPVLKNGINSLVKNKRPNADTLS SSAIISSILLGKESAALTIMFLEEVSELLTVYTMEKTRGAIKDMLSVGESYVWKEISEDN VKRVPIEEIQKDDIIVVQTGEKISVDGKIIKGEALIDQSSITGEYMPLKKSEGETVYAGT IVKNGNISILAEKVGDDRTVSRIIKLVEDANFNKADIQNYADTFSAQLIPLNFILAGIVY ASTRSITKAMSMLVIDYSCGIRLSTAVAFSAAINTAAKNGILVKGSNFIEELSKAETIIF DKTGTITEGKPKVQSIEVFDNNMSENEMIGLAGAAEEQSSHPLATAIMTEIKDRGIEIPK HSKIKTVVSRGVETKVGKGKEAKVIRVGSKKYMLENNVNLIAAIDAERGIISRGEIGLYI AQDDKIIGLIGVSDPPRENIKKAINRLRNYGVDDIVLLTGDLRQQAETIASRMSIDRYES ELLPEDKAKNILKFQSKGSNVIMIGDGVNDAPALSYANVGVALGSTRTDVAMEAADITIT QDNPLLVPGVIGLSKSTVKTIKENFAMVIGLNTFALVLGATGILAPIYASVLHNSTTILV VLNSLKLLKYDIKTN >gi|292606570|gb|ADGG01000040.1| GENE 25 28957 - 29343 482 128 aa, chain - ## HITS:1 COG:no KEGG:FN1189 NR:ns ## KEGG: FN1189 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 127 1 116 116 183 89.0 2e-45 MFKDILKKTYLMFNKVKVVHSIPGRMRLLIPSLDKFPEEMKKHEHYISAIIKLKNGIKSI EYSYLTSKILIEYDKTKLKEQDIVDWLNKIWKIIVDNEEVYYGMSVDEVEKNVKRFYEML KGELEGRK >gi|292606570|gb|ADGG01000040.1| GENE 26 29357 - 29851 603 164 aa, chain - ## HITS:1 COG:no KEGG:FN1188 NR:ns ## KEGG: FN1188 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 163 1 163 165 210 73.0 1e-53 MKNNMLLPNFYGVFEVKSATKNRLRMEIEKLKNNKVEIANLKENLKKIEVIKSFKVVESL GSLTVEFDEKEIDTQFMVGIILKLLNLDEELLKGREAKAKTLFKTVAQIADITIYNKTKG LFDTKTLLGTGLLIYGLKKFKADMILPGGATLIWWSYRLLSKKS >gi|292606570|gb|ADGG01000040.1| GENE 27 29970 - 30497 514 175 aa, chain - ## HITS:1 COG:no KEGG:Coch_0117 NR:ns ## KEGG: Coch_0117 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 4 171 6 171 175 151 40.0 1e-35 MLKIEKIILKNKIVDKDNYFEIGYCEELKIYMMHVFVSWIASYYRYYKIDKEDYNLYKNN PQSFYKKYENEIKQNNNAYTENFIGSSALRDYDGVKDFQHSYPTKNEIINPFQNYVYIEG ILFARIIWEIGEFLIPPFQKIISKDGSYKFPLREICELKNNSSGNPICYYLPFDD >gi|292606570|gb|ADGG01000040.1| GENE 28 30877 - 31629 899 250 aa, chain + ## HITS:1 COG:no KEGG:FN1183 NR:ns ## KEGG: FN1183 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 250 1 250 250 429 90.0 1e-119 MRFILNFELDTVIIPVEIRKTIISFFKKSLTEAHNSKYYPEFFTGTQIKDYSFSVIFPLD KYLGEEIYLKKPEMKVIVSCSEKNNIGFLLVNVFLSQRNKNFPLPKNTHMILKDVRIVEE KNISGEEAIFQTTIGGGIVVREHNKENNKDICYSVGDEKFEEVLNWLMKERFKRLGYPED IFKDFSCKLLQGRKIIVKHFDLKFPITTGRFKIKAPKILLEEIYRTGMGSRLSQGFGLLE YLGGEIKDEV >gi|292606570|gb|ADGG01000040.1| GENE 29 31619 - 33163 1562 514 aa, chain + ## HITS:1 COG:no KEGG:FN1182 NR:ns ## KEGG: FN1182 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 514 1 517 517 729 86.0 0 MKYDIDKNEYAFDTAISASDWKYSAAITGLIYYFKELEKKYEIKNLTIDEISDSFLLYNK EDITEESYLNFIEMFYPEDTLAHKKIENQLKYTKEFTPEIIKSIKENMSANTVLKKVFSK IKFDGTNKEEALKLLNENRHLIIKETFRNKKDLYDNYCQTSRLLEKGDNNPCRLKGYYFD PNRKSKTTGYNFTSTSVDYFDDEVFDFIPFAFTGNSFETIFLNDNLDLEILENMNYKLRE YFSEEKERENEEIKKFKQEKAIKEKRNEEIEENLTSIPLKKIFLNILRKKSDYIKYGMEI IYKNRDKEYFETWYLRNDSIEVLKIVEDFSKLDIRIKITDKYYFNLLDEVFSAILNLSLL TNSIVYLLKDRENFIKLDVSKENLSKIFKYNYAIEQLIKINQTIRNGGKGMDKNLKNSIK ACASEVMKKFIKDNSLNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFSFDYI ENPTQNEDIIHYFILELDQSRLESKKNKENEDKE >gi|292606570|gb|ADGG01000040.1| GENE 30 33176 - 34060 1360 294 aa, chain + ## HITS:1 COG:FN1181 KEGG:ns NR:ns ## COG: FN1181 COG1857 # Protein_GI_number: 19704516 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 294 1 300 300 495 91.0 1e-140 MKKNALTVTIVANMTSNYSEGLGNISSVQKIYRDRNVYAIRSRESLKNAIMVQSGMYKDL ETEANGATQKKVDENLNATNCRALEGGYMNTKESTYVRNSSFYLTDAISTESFINETRFH NNLYLATNYANANNLNVQKDAGKVGLMPYQYEYEKSLKVYSLTIDLEKVGKDPNFPDKEA DNKEKFERVKSILEAIENLSLVVKGNLDNAEPVFAIGGLSLRKTHYFENVVRVEQGALVL GEALKEKKEDGFNCALLKGDIFTNEAEIVKELQPTSMREFFKSLIEDVKNYYGA >gi|292606570|gb|ADGG01000040.1| GENE 31 34071 - 35150 1113 359 aa, chain + ## HITS:1 COG:no KEGG:CTC01145 NR:ns ## KEGG: CTC01145 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 359 1 360 360 305 54.0 3e-81 MEALRIILKQSSANYRKAGTIDNKMTYPLPIPSTVIGALHNICGYTEYHSMDISIQGKFS SLSRKVYTDYCFLNSALDDRGNLVKVVDPDAFSGAFVKVASAKKSQGNSFKDRITIQVHN EELLQEYCNLKEKSKEIEELKNSEYKKKLEEFKVLKKEIADKKKKEDKKSEVFKKLSEEE KKIKLEEEKYKEEFKKFEYENYTKPYSHFQNLVTSLKSYEILNDIFLILHIKSDEETLKD IENNIFNLQSLGRSEDFVEVIECKIVELQEVEEVIENKLSMYINAKDFYEEKIFTETVDG DHGSGGTKYYLDKNYEIKKGKREFKKVTVIYSTRVQAEESSENVKADIYNEETILVNFI >gi|292606570|gb|ADGG01000040.1| GENE 32 35161 - 37662 2695 833 aa, chain + ## HITS:1 COG:FN1179 KEGG:ns NR:ns ## COG: FN1179 COG1203 # Protein_GI_number: 19704514 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Fusobacterium nucleatum # 14 833 4 812 812 1021 73.0 0 MENYKINSKLKIYEDIKNIYYAKPDKTLAQHNEELHIQKKKLINLGYLSDEKLIELLEYS IEFHDIGKINSEFQIRVKENKKFDVSKEVAHNILSIYFIDKKDYEDKNDYESITYAVFYH HRFGNGDNDSIRADENTKKIIETLLSKLEEKGIKVIKKLSPSLKLPNLHTDRNLKLLGLL MKCDHSASGGYQIEYPNDFLEVALNELLNEFKEKDKSADWNDMQKFCKENSDKNIIAIAD TGMGKTEGGFLWGGNNKIFFVLPLRTAINAMFKRFNEVIIKGENKEERVGLLHSDSLEYY LNNKKELVIDDKDEKEMDILEYNKRGKHLSLPVTICTPDQIFNFILKYKGYESKLATLSY SKIILDEMQMYDANLLAAVIFGITKIIEMGGKIAIVTATFPPIIEYFLNKYLMKNNQNVI KDLDKPNEIVGEEIFIKKKFTNNEKIRHNLVLIDDEIGIQEILWKFKDNRDKKKSSKKIL VICNTIKKAQEIYSKLKIELEDYFRELDKKKTCLTSKREDKEEINEILHLLHSNFIREDR ESKEQEILNFGKTEFYGEGIWISTSLVEASLDIDFDYLFTELQDLNSLFQRFGRCNRKGK KSVDETNCFIYLKIEDKYLKEKDSRYGFIDKDIYENSKKGLENYCKVVSKNELDNSEDYN ELFKSFSKKITEGEKITLIEENLSFENLKDSPFVDEFEKAYDKYQRVLNSDKNSQDDLKL RDIQSVTVIPYNIYEENEENIKEFIKKIKDTNLSLEERQKAKTDLLKKTLSIQYYQLSKY IREILKGKADANKYKSESINKFEKITIMEADYNKELGFRAKDFKDGLPIYEFI >gi|292606570|gb|ADGG01000040.1| GENE 33 37634 - 38206 491 190 aa, chain + ## HITS:1 COG:FN1178 KEGG:ns NR:ns ## COG: FN1178 COG1468 # Protein_GI_number: 19704513 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Fusobacterium nucleatum # 27 190 1 164 164 259 92.0 1e-69 MDFQYTNLFNEYKLKLYQLNYGEIDIMDKDITGLMVYYYEVCKRKLWYFTNDIQLEENNS NVILGKLLEENSYTRDEKKINIDGVINIDFIRSKKILHEIKKSNSIEPASILQVQYYLYY LEKKGLVGLKGILDYPLLKQTVEVNLTDSDRENLENIIIGIKEILRKESPPTLEKKNICK KCAYFDLCFV >gi|292606570|gb|ADGG01000040.1| GENE 34 38218 - 39210 781 330 aa, chain + ## HITS:1 COG:FN1177 KEGG:ns NR:ns ## COG: FN1177 COG1518 # Protein_GI_number: 19704512 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 330 9 338 338 577 93.0 1e-165 MKRSYFLYTNGTLKRKDNTITFINEQDEKRDIPIEMIDDFYVMSEMNFNTKFINYISQFG IPIHFFNYYTFYTGSFYPREMNVSGQLLVKQVEHYTNPQKRIEIAREFIEGASFNIYRNL RYYNGRGKDLKFYMEQIEELRRQLNEVTNVEELMGYEGNIRKIYYEAWNIIVNQEIDFEK RVKNPPDNMINSLISFINTLFYTRVLGEIYKTQLNPTVSYLHQPSTRRFSLSLDISEVFK PLIVDRLIFSLLNKNQITEKSFVKDFNYLRLKEDSSKLIVQEFEDRLKQVITHKDLNRKI SYQYLVRLECYKLIKHLLGEKKYQAFQMWW >gi|292606570|gb|ADGG01000040.1| GENE 35 39215 - 39493 267 92 aa, chain + ## HITS:1 COG:FN1176 KEGG:ns NR:ns ## COG: FN1176 COG1343 # Protein_GI_number: 19704511 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 92 15 106 106 163 94.0 7e-41 MYVVAVYDISLDEKGNRNWRKVFGICKRYLHHIQKSVFEGELSEVDIQRLKYEVSKYIRN DLDSFIIFKSRNERWMEKEMLGLQEDKTDNFL Prediction of potential genes in microbial genomes Time: Thu May 19 22:04:18 2011 Seq name: gi|292606569|gb|ADGG01000041.1| Fusobacterium sp. 1_1_41FAA cont1.41, whole genome shotgun sequence Length of sequence - 261644 bp Number of predicted genes - 291, with homology - 286 Number of transcription units - 97, operones - 65 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 681 - 740 7.7 1 1 Tu 1 . + CDS 760 - 906 84 ## + Term 951 - 1000 -0.8 + Prom 1174 - 1233 17.2 2 2 Tu 1 . + CDS 1335 - 2669 2234 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 2800 - 2841 -0.4 + Prom 2880 - 2939 15.2 3 3 Op 1 1/0.333 + CDS 3011 - 4138 1517 ## COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 4 3 Op 2 1/0.333 + CDS 4131 - 5207 1226 ## COG0820 Predicted Fe-S-cluster redox enzyme 5 3 Op 3 1/0.333 + CDS 5211 - 7448 2999 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 6 3 Op 4 5/0.000 + CDS 7450 - 7791 507 ## COG0210 Superfamily I DNA and RNA helicases 7 3 Op 5 1/0.333 + CDS 7805 - 10237 2376 ## COG0210 Superfamily I DNA and RNA helicases 8 3 Op 6 28/0.000 + CDS 10234 - 11403 1218 ## COG0420 DNA repair exonuclease 9 3 Op 7 . + CDS 11393 - 11701 436 ## COG0419 ATPase involved in DNA repair 10 3 Op 8 . + CDS 11742 - 13589 2115 ## COG0419 ATPase involved in DNA repair + Prom 13591 - 13650 6.4 11 4 Op 1 1/0.333 + CDS 13760 - 14161 521 ## COG0419 ATPase involved in DNA repair 12 4 Op 2 . + CDS 14170 - 14835 873 ## COG1636 Uncharacterized protein conserved in bacteria 13 4 Op 3 . + CDS 14828 - 15445 628 ## FN0520 hypothetical protein 14 4 Op 4 . + CDS 15455 - 16471 1361 ## COG2849 Uncharacterized protein conserved in bacteria 15 4 Op 5 . + CDS 16523 - 17170 782 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 17191 - 17250 8.2 16 5 Tu 1 . + CDS 17276 - 18148 470 ## gi|294783096|ref|ZP_06748420.1| conserved hypothetical protein - Term 18260 - 18302 -1.0 17 6 Tu 1 . - CDS 18371 - 18622 438 ## COG4545 Glutaredoxin-related protein - Prom 18646 - 18705 9.9 + Prom 18657 - 18716 2.5 18 7 Tu 1 . + CDS 18747 - 18938 139 ## gi|294783098|ref|ZP_06748422.1| hypothetical protein HMPREF0400_01082 + Prom 19083 - 19142 12.8 19 8 Op 1 1/0.333 + CDS 19174 - 20250 1266 ## COG0787 Alanine racemase 20 8 Op 2 1/0.333 + CDS 20254 - 21036 848 ## COG2035 Predicted membrane protein 21 8 Op 3 . + CDS 21056 - 21922 929 ## COG0682 Prolipoprotein diacylglyceryltransferase + Term 22007 - 22049 2.4 + Prom 22061 - 22120 10.3 22 9 Op 1 . + CDS 22143 - 23294 2158 ## COG0192 S-adenosylmethionine synthetase 23 9 Op 2 . + CDS 23307 - 23684 480 ## gi|237739785|ref|ZP_04570266.1| predicted protein + Term 23686 - 23726 8.5 - Term 23679 - 23709 1.2 24 10 Op 1 . - CDS 23712 - 24626 1423 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 25 10 Op 2 15/0.000 - CDS 24700 - 26541 2315 ## COG2217 Cation transport ATPase 26 10 Op 3 2/0.000 - CDS 26572 - 26787 413 ## COG2608 Copper chaperone 27 10 Op 4 . - CDS 26789 - 27175 591 ## COG0640 Predicted transcriptional regulators - Prom 27218 - 27277 10.4 - Term 27269 - 27316 7.2 28 11 Op 1 . - CDS 27365 - 27811 535 ## gi|294783106|ref|ZP_06748430.1| hypothetical protein HMPREF0400_01091 29 11 Op 2 1/0.333 - CDS 27847 - 29466 1767 ## COG1283 Na+/phosphate symporter 30 11 Op 3 1/0.333 - CDS 29502 - 30374 929 ## COG4866 Uncharacterized conserved protein 31 11 Op 4 1/0.333 - CDS 30387 - 31745 2024 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 32 11 Op 5 . - CDS 31788 - 32552 950 ## COG2853 Surface lipoprotein 33 11 Op 6 . - CDS 32542 - 33825 1454 ## FN0280 hypothetical protein 34 11 Op 7 1/0.333 - CDS 33837 - 38168 5033 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 35 11 Op 8 2/0.000 - CDS 38220 - 38783 664 ## COG4752 Uncharacterized protein conserved in bacteria 36 11 Op 9 30/0.000 - CDS 38792 - 39487 866 ## COG0336 tRNA-(guanine-N1)-methyltransferase 37 11 Op 10 12/0.000 - CDS 39517 - 40032 708 ## COG0806 RimM protein, required for 16S rRNA processing 38 11 Op 11 . - CDS 40041 - 40280 405 ## COG1837 Predicted RNA-binding protein (contains KH domain) 39 11 Op 12 . - CDS 40291 - 40539 293 ## FN0286 hypothetical protein 40 11 Op 13 1/0.333 - CDS 40546 - 41340 854 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 41 11 Op 14 . - CDS 41350 - 41877 747 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 41910 - 41969 8.1 42 12 Tu 1 . - CDS 41996 - 42307 460 ## FN0134 hypothetical protein - Prom 42372 - 42431 10.7 - Term 42412 - 42460 6.1 43 13 Op 1 1/0.333 - CDS 42475 - 42846 177 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 44 13 Op 2 42/0.000 - CDS 42856 - 43251 561 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 45 13 Op 3 42/0.000 - CDS 43262 - 44650 1909 ## COG0055 F0F1-type ATP synthase, beta subunit - Prom 44826 - 44885 8.2 46 13 Op 4 42/0.000 - CDS 44893 - 45741 1250 ## COG0224 F0F1-type ATP synthase, gamma subunit 47 13 Op 5 41/0.000 - CDS 45753 - 47255 1986 ## COG0056 F0F1-type ATP synthase, alpha subunit 48 13 Op 6 38/0.000 - CDS 47280 - 47804 629 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 49 13 Op 7 37/0.000 - CDS 47801 - 48292 504 ## COG0711 F0F1-type ATP synthase, subunit b 50 13 Op 8 40/0.000 - CDS 48337 - 48606 533 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 51 13 Op 9 . - CDS 48639 - 49388 623 ## COG0356 F0F1-type ATP synthase, subunit a 52 13 Op 10 . - CDS 49416 - 49793 211 ## FN0365 ATP synthase protein I, sodium ion specific 53 13 Op 11 . - CDS 49817 - 50035 183 ## gi|262066577|ref|ZP_06026189.1| putative ATP synthase protein I 54 13 Op 12 1/0.333 - CDS 50049 - 51407 2287 ## COG1109 Phosphomannomutase 55 13 Op 13 1/0.333 - CDS 51429 - 51944 292 ## COG4769 Predicted membrane protein - Prom 52095 - 52154 9.1 56 14 Op 1 1/0.333 - CDS 52173 - 53606 1910 ## COG0015 Adenylosuccinate lyase 57 14 Op 2 1/0.333 - CDS 53599 - 54030 189 ## PROTEIN SUPPORTED gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 58 14 Op 3 . - CDS 54049 - 55074 1283 ## COG0681 Signal peptidase I - Prom 55150 - 55209 8.1 + Prom 55085 - 55144 15.7 59 15 Op 1 . + CDS 55265 - 56029 826 ## FN0371 hypothetical protein 60 15 Op 2 . + CDS 56049 - 56792 748 ## FN0371 hypothetical protein 61 15 Op 3 . + CDS 56823 - 57587 933 ## FN0371 hypothetical protein + Prom 57590 - 57649 9.2 62 16 Op 1 . + CDS 57669 - 58433 916 ## FN0371 hypothetical protein + Prom 58441 - 58500 12.9 63 16 Op 2 1/0.333 + CDS 58533 - 61091 2751 ## COG0608 Single-stranded DNA-specific exonuclease + Prom 61100 - 61159 9.9 64 17 Op 1 7/0.000 + CDS 61243 - 62277 1570 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 65 17 Op 2 17/0.000 + CDS 62292 - 63404 1437 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 66 17 Op 3 . + CDS 63394 - 65040 1601 ## COG1178 ABC-type Fe3+ transport system, permease component + Term 65047 - 65097 15.1 - Term 65035 - 65084 12.4 67 18 Op 1 . - CDS 65087 - 65884 1141 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis - Prom 65921 - 65980 8.2 - Term 65983 - 66023 5.0 68 18 Op 2 1/0.333 - CDS 66032 - 66748 1055 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 66775 - 66834 9.7 - Term 66828 - 66864 3.4 69 19 Op 1 1/0.333 - CDS 66880 - 67374 766 ## COG2849 Uncharacterized protein conserved in bacteria 70 19 Op 2 1/0.333 - CDS 67397 - 67894 718 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 67929 - 67988 8.1 - Term 67976 - 68016 5.8 71 20 Op 1 1/0.333 - CDS 68036 - 68752 1076 ## COG2849 Uncharacterized protein conserved in bacteria 72 20 Op 2 1/0.333 - CDS 68823 - 69710 983 ## COG2849 Uncharacterized protein conserved in bacteria 73 20 Op 3 1/0.333 - CDS 69734 - 70459 1056 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 70505 - 70564 11.6 - Term 70558 - 70599 6.0 74 21 Tu 1 . - CDS 70611 - 71336 1101 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 71356 - 71415 7.2 - Term 71391 - 71427 1.7 75 22 Op 1 . - CDS 71497 - 71631 164 ## gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein 76 22 Op 2 . - CDS 71703 - 72131 567 ## gi|294783152|ref|ZP_06748476.1| conserved hypothetical protein 77 22 Op 3 . - CDS 72165 - 73664 2008 ## COG1288 Predicted membrane protein - Prom 73685 - 73744 6.9 78 23 Tu 1 . + CDS 74069 - 74245 352 ## gi|294783154|ref|ZP_06748478.1| conserved hypothetical protein + Term 74249 - 74301 13.0 + Prom 74602 - 74661 6.7 79 24 Tu 1 . + CDS 74754 - 75566 966 ## gi|294783155|ref|ZP_06748479.1| hypothetical protein HMPREF0400_01140 + Term 75573 - 75622 6.7 + Prom 75623 - 75682 9.2 80 25 Op 1 . + CDS 75749 - 75889 108 ## + Prom 75905 - 75964 13.9 81 25 Op 2 . + CDS 76016 - 76195 297 ## FN1884 hypothetical protein + Term 76203 - 76252 9.0 + Prom 76199 - 76258 9.6 82 26 Op 1 . + CDS 76316 - 76705 526 ## COG0824 Predicted thioesterase 83 26 Op 2 . + CDS 76768 - 76902 156 ## gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein 84 27 Op 1 1/0.333 - CDS 76975 - 78600 1656 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP 85 27 Op 2 1/0.333 - CDS 78602 - 79279 975 ## COG1846 Transcriptional regulators 86 27 Op 3 10/0.000 - CDS 79294 - 79941 742 ## COG0036 Pentose-5-phosphate-3-epimerase 87 27 Op 4 7/0.000 - CDS 79934 - 80737 651 ## COG1162 Predicted GTPases - Term 80927 - 80957 -0.6 88 27 Op 5 . - CDS 81094 - 81684 804 ## COG2815 Uncharacterized protein conserved in bacteria - Prom 81772 - 81831 9.7 - Term 81833 - 81880 12.6 89 28 Op 1 . - CDS 81881 - 82507 475 ## gi|294783164|ref|ZP_06748488.1| hypothetical protein HMPREF0400_01149 90 28 Op 2 . - CDS 82508 - 82867 348 ## gi|294783165|ref|ZP_06748489.1| conserved hypothetical protein - Prom 82902 - 82961 3.0 91 28 Op 3 . - CDS 82965 - 83726 1035 ## COG1192 ATPases involved in chromosome partitioning - Prom 83775 - 83834 12.6 + Prom 83760 - 83819 11.5 92 29 Op 1 . + CDS 83976 - 84614 705 ## FN1272 TetR family transcriptional regulator 93 29 Op 2 13/0.000 + CDS 84633 - 85910 1549 ## COG1538 Outer membrane protein 94 29 Op 3 27/0.000 + CDS 85928 - 87028 1511 ## COG0845 Membrane-fusion protein 95 29 Op 4 . + CDS 87031 - 90093 4065 ## COG0841 Cation/multidrug efflux pump 96 29 Op 5 . + CDS 90093 - 90506 504 ## FN1276 hypothetical protein + Term 90512 - 90553 5.6 + Prom 90536 - 90595 13.5 97 30 Op 1 . + CDS 90615 - 91142 505 ## COG4186 Predicted phosphoesterase or phosphohydrolase + Prom 91154 - 91213 8.8 98 30 Op 2 . + CDS 91268 - 92227 1539 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family + Term 92238 - 92276 7.2 - Term 92226 - 92264 3.4 99 31 Tu 1 . - CDS 92361 - 93224 596 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 93298 - 93357 14.4 - Term 93518 - 93578 14.3 100 32 Tu 1 . - CDS 93619 - 95253 2551 ## COG2759 Formyltetrahydrofolate synthetase - Prom 95281 - 95340 10.2 101 33 Tu 1 . - CDS 95413 - 96003 698 ## FN2083 hypothetical protein + Prom 96129 - 96188 8.6 102 34 Tu 1 . + CDS 96303 - 97016 729 ## COG3619 Predicted membrane protein + Term 97173 - 97218 -0.9 103 35 Op 1 . - CDS 97035 - 97565 1026 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 97586 - 97645 2.5 104 35 Op 2 1/0.333 - CDS 97648 - 99006 682 ## PROTEIN SUPPORTED gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 - Prom 99034 - 99093 7.4 105 36 Tu 1 . - CDS 99119 - 100672 2081 ## COG1492 Cobyric acid synthase - Prom 100693 - 100752 7.5 + Prom 100625 - 100684 8.3 106 37 Op 1 5/0.000 + CDS 100715 - 101782 1529 ## COG2252 Permeases 107 37 Op 2 . + CDS 101794 - 102327 737 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 108 38 Op 1 . - CDS 102645 - 103223 559 ## gi|294783182|ref|ZP_06748506.1| conserved hypothetical protein 109 38 Op 2 . - CDS 103233 - 103799 520 ## gi|294783183|ref|ZP_06748507.1| conserved hypothetical protein 110 38 Op 3 . - CDS 103828 - 104637 833 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 104670 - 104729 6.7 111 39 Tu 1 . - CDS 104897 - 105136 161 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 105242 - 105301 8.3 + Prom 105844 - 105903 8.2 112 40 Op 1 . + CDS 106112 - 106612 374 ## gi|294783185|ref|ZP_06748509.1| conserved hypothetical protein 113 40 Op 2 . + CDS 106584 - 107462 914 ## FN0289 hypothetical protein + Term 107694 - 107727 1.1 + Prom 107742 - 107801 14.2 114 41 Op 1 34/0.000 + CDS 107821 - 108531 866 ## COG0765 ABC-type amino acid transport system, permease component 115 41 Op 2 16/0.000 + CDS 108524 - 109252 605 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 116 41 Op 3 . + CDS 109281 - 110009 1066 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 117 41 Op 4 . + CDS 110082 - 110549 524 ## FN1264 hypothetical protein 118 42 Tu 1 . - CDS 110527 - 110757 180 ## gi|262068246|ref|ZP_06027858.1| riboflavin synthase alpha chain - Prom 110845 - 110904 11.0 - Term 110925 - 110971 11.1 119 43 Op 1 . - CDS 110988 - 112322 1919 ## COG0733 Na+-dependent transporters of the SNF family - Prom 112346 - 112405 5.6 120 43 Op 2 . - CDS 112435 - 114168 2639 ## COG3033 Tryptophanase - Prom 114202 - 114261 12.0 + Prom 114200 - 114259 10.9 121 44 Tu 1 . + CDS 114311 - 115003 727 ## COG2964 Uncharacterized protein conserved in bacteria + Term 115014 - 115056 5.4 - Term 114988 - 115055 13.2 122 45 Tu 1 . - CDS 115071 - 116381 1441 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 116409 - 116468 3.9 123 46 Op 1 1/0.333 - CDS 116536 - 117837 1836 ## COG2056 Predicted permease 124 46 Op 2 . - CDS 117885 - 118388 713 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 125 46 Op 3 . - CDS 118439 - 119098 632 ## FN0343 hypothetical protein 126 46 Op 4 1/0.333 - CDS 119082 - 120221 1439 ## COG0116 Predicted N6-adenine-specific DNA methylase 127 46 Op 5 1/0.333 - CDS 120218 - 121312 1140 ## COG0628 Predicted permease 128 46 Op 6 1/0.333 - CDS 121334 - 121726 354 ## COG5341 Uncharacterized protein conserved in bacteria 129 46 Op 7 1/0.333 - CDS 121713 - 122687 1113 ## COG0688 Phosphatidylserine decarboxylase 130 46 Op 8 . - CDS 122680 - 124185 1895 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 124254 - 124313 12.2 + Prom 124176 - 124235 10.0 131 47 Tu 1 . + CDS 124307 - 124762 734 ## COG1490 D-Tyr-tRNAtyr deacylase + Prom 124781 - 124840 16.6 132 48 Op 1 . + CDS 124956 - 125402 517 ## FN0350 hypothetical protein 133 48 Op 2 . + CDS 125426 - 125869 563 ## FN0351 hypothetical protein 134 49 Tu 1 . - CDS 126080 - 127594 1582 ## COG1288 Predicted membrane protein - Prom 127628 - 127687 9.8 - Term 127700 - 127759 8.7 135 50 Op 1 . - CDS 127769 - 128020 288 ## COG2261 Predicted membrane protein 136 50 Op 2 . - CDS 128033 - 128524 474 ## gi|294783208|ref|ZP_06748532.1| conserved hypothetical protein 137 50 Op 3 . - CDS 128544 - 128951 719 ## gi|291460986|ref|ZP_06026273.2| putative general stress protein - Prom 129019 - 129078 15.5 - Term 129154 - 129201 11.5 138 51 Op 1 1/0.333 - CDS 129225 - 129770 849 ## PROTEIN SUPPORTED gi|34763431|ref|ZP_00144379.1| PROBABLE SIGMA(54) MODULATION PROTEIN; SSU ribosomal protein S30P - Prom 129797 - 129856 7.9 139 51 Op 2 . - CDS 129869 - 130840 1140 ## COG0113 Delta-aminolevulinic acid dehydratase 140 51 Op 3 . - CDS 130853 - 131674 876 ## FN0458 hypothetical protein - Prom 131694 - 131753 4.4 141 52 Op 1 . - CDS 131759 - 132163 484 ## gi|294783213|ref|ZP_06748537.1| hypothetical protein HMPREF0400_01200 142 52 Op 2 . - CDS 132173 - 133087 1223 ## VS_1380 hypothetical protein - Prom 133112 - 133171 12.7 + Prom 133207 - 133266 9.7 143 53 Op 1 . + CDS 133417 - 133875 593 ## CDR20291_1745 hypothetical protein 144 53 Op 2 . + CDS 133898 - 134137 421 ## gi|294783216|ref|ZP_06748540.1| conserved hypothetical protein 145 53 Op 3 . + CDS 134164 - 134421 432 ## gi|294783217|ref|ZP_06748541.1| conserved hypothetical protein + Term 134668 - 134724 2.3 146 54 Op 1 . - CDS 134727 - 135071 417 ## gi|294783218|ref|ZP_06748542.1| conserved hypothetical protein 147 54 Op 2 . - CDS 135085 - 135270 260 ## gi|294783219|ref|ZP_06748543.1| conserved hypothetical protein - Prom 135303 - 135362 13.7 + Prom 135574 - 135633 11.4 148 55 Tu 1 . + CDS 135772 - 136065 123 ## COG0582 Integrase + Term 136097 - 136136 -0.6 - Term 136435 - 136471 5.0 149 56 Op 1 . - CDS 136476 - 136955 569 ## COG4824 Phage-related holin (Lysis protein) 150 56 Op 2 . - CDS 136999 - 137196 240 ## gi|294783222|ref|ZP_06748546.1| hypothetical protein HMPREF0400_01209 151 56 Op 3 . - CDS 137193 - 137558 577 ## gi|294783223|ref|ZP_06748547.1| hypothetical protein HMPREF0400_01210 152 56 Op 4 . - CDS 137568 - 138110 578 ## gi|294783224|ref|ZP_06748548.1| conserved hypothetical protein 153 56 Op 5 . - CDS 138107 - 138859 1034 ## gi|294783225|ref|ZP_06748549.1| penicillin-binding protein 1A 154 56 Op 6 . - CDS 138930 - 140105 1377 ## Sterm_2509 hypothetical protein 155 56 Op 7 . - CDS 140098 - 140751 542 ## Sterm_2510 hypothetical protein 156 56 Op 8 . - CDS 140748 - 141848 1109 ## COG3948 Phage-related baseplate assembly protein 157 56 Op 9 . - CDS 141835 - 142116 383 ## gi|294783229|ref|ZP_06748553.1| hypothetical protein HMPREF0400_01216 158 56 Op 10 . - CDS 142128 - 142796 838 ## Dred_1218 hypothetical protein 159 56 Op 11 . - CDS 142793 - 143320 736 ## gi|294783231|ref|ZP_06748555.1| conserved hypothetical protein 160 56 Op 12 . - CDS 143320 - 144366 1056 ## COG3500 Phage protein D 161 56 Op 13 . - CDS 144348 - 144560 370 ## gi|294783233|ref|ZP_06748557.1| hypothetical protein HMPREF0400_01220 162 56 Op 14 . - CDS 144541 - 147447 3954 ## COG5283 Phage-related tail protein - Prom 147489 - 147548 6.9 - Term 147496 - 147533 -0.2 163 57 Op 1 . - CDS 147620 - 148003 539 ## gi|294783235|ref|ZP_06748559.1| conserved hypothetical protein 164 57 Op 2 . - CDS 148015 - 148524 746 ## Spro_4913 major tail tube protein 165 57 Op 3 . - CDS 148534 - 149982 1609 ## COG3497 Phage tail sheath protein FI 166 57 Op 4 . - CDS 149991 - 150314 511 ## gi|294783238|ref|ZP_06748562.1| conserved hypothetical protein 167 57 Op 5 . - CDS 150302 - 150850 491 ## gi|294783239|ref|ZP_06748563.1| hypothetical protein HMPREF0400_01226 168 57 Op 6 . - CDS 150838 - 151383 567 ## gi|294783240|ref|ZP_06748564.1| conserved hypothetical protein 169 57 Op 7 . - CDS 151386 - 151712 336 ## gi|294783241|ref|ZP_06748565.1| hypothetical protein HMPREF0400_01228 170 57 Op 8 . - CDS 151705 - 151950 427 ## gi|294783242|ref|ZP_06748566.1| hypothetical protein HMPREF0400_01229 171 57 Op 9 . - CDS 151964 - 152992 1242 ## CLH_1724 hypothetical protein 172 57 Op 10 . - CDS 153005 - 153331 390 ## gi|294783244|ref|ZP_06748568.1| hypothetical protein HMPREF0400_01231 173 57 Op 11 4/0.000 - CDS 153340 - 154374 1281 ## COG0740 Protease subunit of ATP-dependent Clp proteases 174 57 Op 12 . - CDS 154343 - 155875 1527 ## COG5511 Bacteriophage capsid protein 175 57 Op 13 . - CDS 155884 - 156294 725 ## gi|294783247|ref|ZP_06748571.1| conserved hypothetical protein 176 57 Op 14 . - CDS 156291 - 158111 1700 ## COG5525 Bacteriophage tail assembly protein 177 57 Op 15 . - CDS 158104 - 158706 658 ## gi|294783249|ref|ZP_06748573.1| hypothetical protein HMPREF0400_01236 - Prom 158747 - 158806 3.1 178 58 Op 1 . - CDS 158820 - 159500 717 ## gi|294783250|ref|ZP_06748574.1| conserved hypothetical protein 179 58 Op 2 . - CDS 159503 - 160819 1478 ## COG0863 DNA modification methylase - Prom 160918 - 160977 12.1 - Term 160887 - 160921 -0.5 180 59 Op 1 . - CDS 160995 - 162080 578 ## gi|294783252|ref|ZP_06748576.1| hypothetical protein HMPREF0400_01239 181 59 Op 2 . - CDS 162080 - 162268 301 ## gi|294783253|ref|ZP_06748577.1| hypothetical protein HMPREF0400_01240 182 59 Op 3 . - CDS 162235 - 162483 276 ## gi|294783254|ref|ZP_06748578.1| conserved hypothetical protein 183 59 Op 4 . - CDS 162520 - 162705 267 ## gi|294783255|ref|ZP_06748579.1| hypothetical protein HMPREF0400_01242 - Prom 162739 - 162798 8.7 184 60 Op 1 . - CDS 162840 - 163301 263 ## gi|294783256|ref|ZP_06748580.1| conserved hypothetical protein 185 60 Op 2 . - CDS 163379 - 163594 201 ## gi|294783257|ref|ZP_06748581.1| hypothetical protein HMPREF0400_01244 186 60 Op 3 . - CDS 163601 - 164059 629 ## COG3600 Uncharacterized phage-associated protein - Prom 164140 - 164199 14.7 187 61 Tu 1 . - CDS 164221 - 164910 870 ## gi|294783259|ref|ZP_06748583.1| phage repressor - Prom 164938 - 164997 15.3 - Term 165322 - 165362 3.1 188 62 Op 1 . - CDS 165383 - 166114 670 ## gi|294783261|ref|ZP_06748585.1| conserved hypothetical protein - Term 166128 - 166172 4.3 189 62 Op 2 . - CDS 166182 - 166943 679 ## gi|294783262|ref|ZP_06748586.1| conserved hypothetical protein - Prom 166969 - 167028 3.7 190 63 Tu 1 . - CDS 167054 - 167269 272 ## Sterm_0816 transcriptional regulator, XRE family - Prom 167492 - 167551 10.9 + Prom 167341 - 167400 7.3 191 64 Tu 1 . + CDS 167619 - 167843 363 ## gi|294783264|ref|ZP_06748588.1| conserved hypothetical protein + Prom 167873 - 167932 5.7 192 65 Op 1 . + CDS 167984 - 168109 105 ## 193 65 Op 2 . + CDS 168102 - 168296 98 ## gi|294783265|ref|ZP_06748589.1| hypothetical protein HMPREF0400_01252 194 65 Op 3 . + CDS 168308 - 168484 305 ## gi|294783266|ref|ZP_06748590.1| hypothetical protein HMPREF0400_01253 195 65 Op 4 . + CDS 168499 - 168690 394 ## gi|294783267|ref|ZP_06748591.1| hypothetical protein HMPREF0400_01254 196 65 Op 5 . + CDS 168706 - 169677 1037 ## gi|294783268|ref|ZP_06748592.1| conserved hypothetical protein 197 65 Op 6 . + CDS 169689 - 169919 376 ## gi|294783269|ref|ZP_06748593.1| hypothetical protein HMPREF0400_01256 198 65 Op 7 . + CDS 169920 - 170303 498 ## gi|294783270|ref|ZP_06748594.1| hypothetical protein HMPREF0400_01257 199 65 Op 8 . + CDS 170313 - 171017 728 ## gi|294783271|ref|ZP_06748595.1| hypothetical protein HMPREF0400_01258 200 65 Op 9 . + CDS 171007 - 171552 622 ## gi|34762198|ref|ZP_00143205.1| hypothetical protein 201 65 Op 10 . + CDS 171629 - 171826 203 ## gi|294783272|ref|ZP_06748596.1| F-box/LRR-repeat protein + Prom 171844 - 171903 3.6 202 66 Op 1 . + CDS 171939 - 172145 253 ## gi|294783273|ref|ZP_06748597.1| hypothetical protein HMPREF0400_01261 203 66 Op 2 . + CDS 172208 - 172789 749 ## gi|294783275|ref|ZP_06748599.1| conserved hypothetical protein 204 66 Op 3 . + CDS 172806 - 173108 452 ## gi|294783276|ref|ZP_06748600.1| conserved hypothetical protein 205 66 Op 4 . + CDS 173101 - 173688 419 ## gi|294783277|ref|ZP_06748601.1| DNA double-strand break repair Rad50 ATPase 206 66 Op 5 . + CDS 173663 - 173896 271 ## gi|294783278|ref|ZP_06748602.1| hypothetical protein HMPREF0400_01266 207 66 Op 6 . + CDS 173898 - 174458 472 ## gi|294783279|ref|ZP_06748603.1| conserved hypothetical protein 208 66 Op 7 . + CDS 174455 - 175195 890 ## Swit_5209 hypothetical protein 209 66 Op 8 . + CDS 175176 - 176216 1038 ## COG0582 Integrase 210 66 Op 9 . + CDS 176218 - 177216 851 ## gi|294783282|ref|ZP_06748606.1| hypothetical protein HMPREF0400_01270 211 66 Op 10 . + CDS 177233 - 177463 375 ## CLL_A2772 hypothetical protein 212 66 Op 11 . + CDS 177466 - 178068 460 ## CLL_A2771 phage protein 213 66 Op 12 . + CDS 178061 - 178252 273 ## gi|294783285|ref|ZP_06748609.1| hypothetical protein HMPREF0400_01273 214 66 Op 13 . + CDS 178255 - 178644 561 ## CLJ_B1799 hypothetical protein 215 66 Op 14 . + CDS 178657 - 178848 137 ## gi|294783287|ref|ZP_06748611.1| hypothetical protein HMPREF0400_01275 216 66 Op 15 . + CDS 178858 - 179355 632 ## gi|294783288|ref|ZP_06748612.1| dUTP diphosphatase superfamily 217 66 Op 16 . + CDS 179365 - 179577 288 ## gi|294783289|ref|ZP_06748613.1| hypothetical protein HMPREF0400_01277 + Prom 179652 - 179711 4.8 218 67 Tu 1 . + CDS 179740 - 180876 747 ## COG0582 Integrase + Prom 180933 - 180992 6.4 219 68 Tu 1 . + CDS 181021 - 181230 372 ## + Term 181428 - 181477 0.3 - TRNA 181028 - 181116 67.4 # Ser GCT 0 0 - Term 181119 - 181178 4.1 220 69 Op 1 46/0.000 - CDS 181214 - 181564 564 ## PROTEIN SUPPORTED gi|237739652|ref|ZP_04570133.1| LSU ribosomal protein L20P 221 69 Op 2 36/0.000 - CDS 181600 - 181806 359 ## PROTEIN SUPPORTED gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P 222 69 Op 3 . - CDS 181879 - 182370 350 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 - Prom 182449 - 182508 9.5 - Term 182508 - 182543 -0.2 223 70 Op 1 . - CDS 182613 - 183230 607 ## FN0995 hypothetical protein 224 70 Op 2 . - CDS 183246 - 184031 806 ## FN0994 hypothetical protein 225 70 Op 3 1/0.333 - CDS 184060 - 185511 1253 ## COG0168 Trk-type K+ transport systems, membrane components 226 70 Op 4 1/0.333 - CDS 185515 - 186591 848 ## COG0859 ADP-heptose:LPS heptosyltransferase 227 70 Op 5 . - CDS 186593 - 187375 907 ## COG1183 Phosphatidylserine synthase - Prom 187408 - 187467 9.3 + Prom 187424 - 187483 12.6 228 71 Tu 1 . + CDS 187540 - 189474 1971 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Term 189540 - 189586 9.7 229 72 Tu 1 . - CDS 189607 - 191544 1977 ## COG3855 Uncharacterized protein conserved in bacteria - Prom 191604 - 191663 5.2 - Term 191632 - 191674 -1.0 230 73 Op 1 1/0.333 - CDS 191769 - 194318 3773 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 231 73 Op 2 . - CDS 194330 - 194929 579 ## COG0517 FOG: CBS domain - Prom 195088 - 195147 11.3 + Prom 194973 - 195032 7.9 232 74 Op 1 . + CDS 195163 - 195576 652 ## FN0794 hypothetical protein 233 74 Op 2 . + CDS 195585 - 196973 1331 ## FN0033 hypothetical protein 234 74 Op 3 . + CDS 197009 - 202069 5759 ## FN0033 hypothetical protein 235 75 Op 1 . - CDS 202175 - 203323 1586 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 236 75 Op 2 . - CDS 203385 - 204782 1213 ## FN0687 hypothetical protein - Term 204792 - 204834 9.8 237 76 Op 1 . - CDS 204836 - 206248 1553 ## COG4452 Inner membrane protein involved in colicin E2 resistance 238 76 Op 2 . - CDS 206309 - 207742 1629 ## COG4452 Inner membrane protein involved in colicin E2 resistance - Prom 207815 - 207874 11.2 + Prom 207686 - 207745 7.9 239 77 Tu 1 . + CDS 207862 - 209034 1436 ## FN1986 hypothetical protein - Term 209232 - 209280 -0.5 240 78 Op 1 2/0.000 - CDS 209351 - 209914 876 ## COG4929 Uncharacterized membrane-anchored protein 241 78 Op 2 . - CDS 209907 - 211712 1513 ## COG4984 Predicted membrane protein - Prom 211752 - 211811 12.6 + Prom 211974 - 212033 7.2 242 79 Op 1 7/0.000 + CDS 212125 - 212673 170 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 243 79 Op 2 15/0.000 + CDS 212683 - 213471 676 ## COG1122 ABC-type cobalt transport system, ATPase component 244 79 Op 3 34/0.000 + CDS 213455 - 214273 284 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 245 79 Op 4 . + CDS 214285 - 215073 344 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 246 80 Op 1 1/0.333 - CDS 215056 - 215997 1572 ## PROTEIN SUPPORTED gi|237739628|ref|ZP_04570109.1| ribosomal protein L11 methyltransferase 247 80 Op 2 . - CDS 215972 - 216763 1093 ## COG1692 Uncharacterized protein conserved in bacteria 248 80 Op 3 . - CDS 216789 - 218426 1564 ## FN1654 hypothetical protein - Prom 218611 - 218670 6.9 + Prom 218472 - 218531 10.1 249 81 Tu 1 . + CDS 218558 - 219586 1058 ## COG0457 FOG: TPR repeat + Prom 219626 - 219685 10.1 250 82 Op 1 21/0.000 + CDS 219743 - 220765 1151 ## COG1420 Transcriptional regulator of heat shock gene 251 82 Op 2 29/0.000 + CDS 220776 - 221378 954 ## COG0576 Molecular chaperone GrpE (heat shock protein) 252 82 Op 3 . + CDS 221415 - 223238 2660 ## COG0443 Molecular chaperone 253 82 Op 4 . + CDS 223256 - 223669 438 ## + Term 223778 - 223823 10.1 + Prom 223756 - 223815 4.9 254 83 Op 1 1/0.333 + CDS 223835 - 224350 579 ## COG0350 Methylated DNA-protein cysteine methyltransferase 255 83 Op 2 . + CDS 224400 - 225578 2151 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 225590 - 225633 1.0 + Prom 225608 - 225667 2.7 256 83 Op 3 . + CDS 225730 - 226119 533 ## gi|294783326|ref|ZP_06748650.1| conserved hypothetical protein + Term 226136 - 226190 13.2 - Term 226124 - 226177 15.1 257 84 Op 1 1/0.333 - CDS 226186 - 227730 1926 ## COG0500 SAM-dependent methyltransferases 258 84 Op 2 31/0.000 - CDS 227761 - 228717 1135 ## COG0341 Preprotein translocase subunit SecF 259 84 Op 3 1/0.333 - CDS 228717 - 229952 1843 ## COG0342 Preprotein translocase subunit SecD 260 84 Op 4 9/0.000 - CDS 229977 - 230393 634 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) - Prom 230619 - 230678 10.1 261 85 Op 1 . - CDS 230681 - 233284 3622 ## COG0013 Alanyl-tRNA synthetase 262 85 Op 2 . - CDS 233296 - 234021 291 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 263 85 Op 3 . - CDS 234049 - 236760 3305 ## FN0694 S-layer protein 264 85 Op 4 1/0.333 - CDS 236753 - 239383 2787 ## COG0249 Mismatch repair ATPase (MutS family) 265 85 Op 5 . - CDS 239434 - 240060 361 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 266 85 Op 6 . - CDS 240002 - 240358 144 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase - Prom 240381 - 240440 7.2 - Term 240404 - 240452 9.1 267 86 Op 1 22/0.000 - CDS 240472 - 240732 342 ## COG0851 Septum formation topological specificity factor 268 86 Op 2 22/0.000 - CDS 240747 - 241541 1136 ## COG2894 Septum formation inhibitor-activating ATPase 269 86 Op 3 1/0.333 - CDS 241543 - 242232 777 ## COG0850 Septum formation inhibitor - Prom 242252 - 242311 7.0 270 86 Op 4 . - CDS 242319 - 243275 1629 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 243394 - 243453 11.0 - Term 243390 - 243424 -0.9 271 87 Op 1 . - CDS 243455 - 244942 1657 ## FN0173 hypothetical protein 272 87 Op 2 . - CDS 244953 - 245696 272 ## PROTEIN SUPPORTED gi|227512216|ref|ZP_03942265.1| ribosomal protein S4e - Prom 245722 - 245781 8.9 - Term 245996 - 246040 -0.6 273 88 Op 1 . - CDS 246168 - 247493 1779 ## COG1160 Predicted GTPases 274 88 Op 2 . - CDS 247564 - 248529 1076 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Prom 248563 - 248622 9.8 - Term 248607 - 248653 7.4 275 89 Op 1 . - CDS 248662 - 248934 376 ## FN1871 hypothetical protein 276 89 Op 2 1/0.333 - CDS 248964 - 249302 476 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 277 89 Op 3 1/0.333 - CDS 249315 - 249485 171 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 249561 - 249620 4.0 278 90 Op 1 1/0.333 - CDS 249766 - 250251 176 ## PROTEIN SUPPORTED gi|225085052|ref|YP_002656490.1| ribosomal protein S2 279 90 Op 2 . - CDS 250315 - 250917 653 ## COG0693 Putative intracellular protease/amidase - Prom 250950 - 251009 9.2 + Prom 250906 - 250965 11.5 280 91 Op 1 . + CDS 251043 - 251339 500 ## FN1878 hypothetical protein + Prom 251392 - 251451 8.4 281 91 Op 2 . + CDS 251487 - 251759 417 ## PROTEIN SUPPORTED gi|237739595|ref|ZP_04570076.1| SSU ribosomal protein S20P + Term 251780 - 251818 1.3 + Prom 251786 - 251845 7.2 282 92 Op 1 . + CDS 251875 - 252441 695 ## COG0778 Nitroreductase 283 92 Op 2 . + CDS 252505 - 254043 2390 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 254149 - 254209 8.6 284 93 Op 1 . - CDS 254321 - 254503 222 ## gi|294783351|ref|ZP_06748675.1| hypothetical protein HMPREF0400_01342 285 93 Op 2 . - CDS 254539 - 255417 567 ## PROTEIN SUPPORTED gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 - Prom 255516 - 255575 5.8 286 94 Op 1 5/0.000 - CDS 255714 - 256034 230 ## COG0675 Transposase and inactivated derivatives 287 94 Op 2 . - CDS 256037 - 256585 495 ## COG0675 Transposase and inactivated derivatives - Prom 256651 - 256710 12.8 - Term 256687 - 256738 1.2 288 95 Tu 1 . - CDS 256748 - 258382 1870 ## FN1654 hypothetical protein - Prom 258428 - 258487 9.5 - Term 258437 - 258486 10.1 289 96 Op 1 . - CDS 258495 - 259694 1696 ## COG1088 dTDP-D-glucose 4,6-dehydratase 290 96 Op 2 . - CDS 259706 - 261220 1127 ## COG0728 Uncharacterized membrane protein, putative virulence factor - Prom 261326 - 261385 11.4 - Term 261305 - 261360 -0.7 291 97 Tu 1 . - CDS 261451 - 261642 271 ## gi|294783356|ref|ZP_06748680.1| N-acylneuraminate cytidylyltransferase Predicted protein(s) >gi|292606569|gb|ADGG01000041.1| GENE 1 760 - 906 84 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLETINKNQVNVILNKNTDEIATLIEKHRNTMITSKKIIKLKNYLNIH >gi|292606569|gb|ADGG01000041.1| GENE 2 1335 - 2669 2234 444 aa, chain + ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 2 444 3 455 456 576 65.0 1e-164 MKIVVVGANHAGTACINTMLDNYKGNEVVVFDSNSNISFLGCGMALWIGGQIAGSDGLFY SSKEKLEAKGAKIHMETGVTNIDFDKKIVYATGKDGKKYEESYDKLVLSTGSLPIDLPIV GKELENVQYVKLFQNAQEVIDKLNVNKSIEKVAVVGAGYIGVELAEAFKRWGKEVYLVDA ADGCLSTYYDKLFREKMDAQLEGHGIKLEYGQLVKEIQGNGKVEKIITNKGEFPADMVVL CAGFRPNTDLGKDKLELFKNGAYVVDKTQKTSLDDVYAIGDCATVYDNSIGGTNYIALAT NAVRSGIVAAHNVCGTNLESIGVQGSNGISIFGLNMVSTGLTFEKAEKLGIEVLETTFHD LQKPEFMEHNNEEVYIRIVYRKDNRKIIGAQMASKYDISMAMHVFSLAIQEGVTIDRFKL LDILFLPHFNKPYNYITMAALGAK >gi|292606569|gb|ADGG01000041.1| GENE 3 3011 - 4138 1517 375 aa, chain + ## HITS:1 COG:FN0527 KEGG:ns NR:ns ## COG: FN0527 COG2872 # Protein_GI_number: 19703862 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain # Organism: Fusobacterium nucleatum # 1 371 1 371 373 531 83.0 1e-150 MENKKINLKKISDMTYEVLNSPFYVDGKGGQLGDRGTIAEANIVEVKENIVILDRNLEDG EYTYSINEKRQEDIRQQHTAQHIFSAEAYNNFGLNTVGFRMAEEYTTVDLDQKDISKEVI EKLEELVNKDIKADILVEEEIYTNEEAHKFENLRKAIKEKIKGDVRFIKIGDVDICACAG FHVSRTSEIEIFKIINHENIKGNYTRFYFLAGDRAKNDYNKKHDIIKKLTNTFSCKDDEI LEMLDKSLKEKASVTAELKSLGMRYAELMAKDFENTFIDYKDFKILIYNEDENLVGILPK FINLDKFLLLIGYNTSYTLMSNIYDCKEIIINIVKNFPNIKGGGGKNKGNIKLDKAYNRN ELIEIIKKGIDNNNE >gi|292606569|gb|ADGG01000041.1| GENE 4 4131 - 5207 1226 358 aa, chain + ## HITS:1 COG:FN0526 KEGG:ns NR:ns ## COG: FN0526 COG0820 # Protein_GI_number: 19703861 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Fusobacterium nucleatum # 1 358 1 358 358 622 91.0 1e-178 MNNEKVNILNLTQEELTEFLVSLGLKKFYGKEVFIWLHKKIIRNFDDMTNLSLKDREILK ENAYIPFFNLLKHQVSKLDKTEKFLFELEDKGTIETVLLRHRDSKNKEIRNTLCVSSQVG CPVKCSFCATGQGGYMRNLSVSEILNQVYTVERRLRKKDESLNNLVFMGMGEPLLNIDNL STALSIISNENGINISKRKITISTSGIVSGIEKILLEKIPIELAVSLHSAINEKRDQIIP INKNFPLEDLSAVLVEYQKQTKRRITFEYILIDNFNISEVDANALADFIHQFDHVVNLIP YNEVEGVEHKRPSMKKIDRFYNYLKNVRKVNVTLRQEKGSDIDGACGQLRQRNKKGDN >gi|292606569|gb|ADGG01000041.1| GENE 5 5211 - 7448 2999 745 aa, chain + ## HITS:1 COG:FN0525 KEGG:ns NR:ns ## COG: FN0525 COG0744 # Protein_GI_number: 19703860 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Fusobacterium nucleatum # 21 745 2 731 731 1164 80.0 0 MKKLLVILLKLIAVLFVVGALGVFAIIVKYRLELPNIQSMVEDYKPQMATTIYDKNNNVV DVLEVDSRDAVKLEDVSPYVKEAFMAIEDKKFYSHHGLHFKGIIRAVLTNFLKGKATQGG SSITQQLAKNAFLTPERTFSRKVKEAILTYQIERTYTKDEILERYLNEIYFGSGSYGIKN AADQYFRKDPKDLNIAEAALLAGIPNRPTKYDPNRSLENALHRQQIILKEMFEDGRITKE EYEEALAYKFELENEENVKNVPKNTSIIYNRRPKKAYNNPELTTIVENYLAEIYDDEQIY TSGLKIYTTIDLDYQKVARDTFNAYPYFKNKDINGAMITLDPFTGGIISIVGGKNFKAGN FDRATMARRQLGSSFKPFVYLKALEEGYEPYSVVVNDFVAYGKWAPKNFDGRYTFNSTLV NSLNLSLNIPAVKLMDAVTVDGFKEEMTDKLKLTSEVQNLTTALGSVDSTPVNTAANFSI FVNGGYIVKPNIIREIRDNQDILIYVADIEKVKAFDSVDVSVITAMLKSVVSNGTATKAR VYDKSGRPIQQGGKTGTTSEHRTAWFVGITPEYVTVCYIGRDDNKPMYGNMTGGSGVAPM WARYYQTLINKGLYTPGKFEFLENYLETGDLVKQNIDIYTGLLDGPNSKEMVIRKGRLQV ESAAKYKNGIASLFGLEASAGGGVYVDSSSDGMIIDSASSESGSSEGGTSENSSRNNISP SAQSGQVETNKEKDGDSLTDRLLGD >gi|292606569|gb|ADGG01000041.1| GENE 6 7450 - 7791 507 113 aa, chain + ## HITS:1 COG:FN0524 KEGG:ns NR:ns ## COG: FN0524 COG0210 # Protein_GI_number: 19703859 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 8 113 2 107 919 170 84.0 7e-43 MSIVNEKTELNEKQLEAVNTVKGPVVIIAGPGTGKTKTLVERTVNILINEKVDAKKIMIT TFTNKAARELELRINERLEKLNKNIDISDMYIGTMHSIWARLIEENIIYSNFF >gi|292606569|gb|ADGG01000041.1| GENE 7 7805 - 10237 2376 810 aa, chain + ## HITS:1 COG:FN0524 KEGG:ns NR:ns ## COG: FN0524 COG0210 # Protein_GI_number: 19703859 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 1 810 113 919 919 1115 80.0 0 MSGDHEQHFFIYSKLKEYKKLEDYQKFFDNLSNNNGKYKGDWARSSFLQNKINDLNENAI DIENIQTSDIYINFIKEAYKLYIKQLYKTNIVDFSYLQVEFFNMLVKNKEFLDKINHDFE YIMVDEYQDSNKIQEKILLLISRLKKNICVVGDEDQSIYRFRGASSENILNFSKCFAEDE CKIIILENNYRSVVDIVEFNNKWISSIDWQGNRFEKNIVSMRDTNILGKNVFHISGKTMD ENIKNTVIFIKKLKQHNKITNYNQIAILFSNFKNNSAKKLEVALKKENIEVYSPRTKVFF EMYEIKLTLGIIFGCFKKYFSEDSINEYLAECIDLARLEIKKDTDFLTWIKEKVKNISAE NFDSLNEIFYELLNFTYYKNVLKEENPIDSRANHNLAILSKIFKNFQKYVSYRKITVEDD FSVVKYFFTGYLDILKESRIDVIFSEEDYPNECIPFLTIHQSKGLEFPVVIVFSLTSKPS RYDDDELSRQTSIDRLINSNSKLSENDKEKFDFYRKFYVAFSRAKNLLVLSCYEMGVSEN FKPFFYSVRGVNSLQFNINEIDLDQVSKKDERKVLSYTTDIAPYRHCPMKYYLVREKEYS TFSKKMFNLGIITHKAIEHINKVFLQKNNSSFNDEYIENLLKNIYRFQNMDLDDNFERIM SIVKKYIEEEKDSFEYIKKVEASEYRIEEDYILYGQIDLILEDENEIQIIDFKTGKYNEL EYSSNYRQQLSLYKLLLQKKYDKDIRTYLYYLEEDEPKKEILITDEELEEDFENINKTTQ NILDNKFPKIPYTQNICGICEFKNYCWGLK >gi|292606569|gb|ADGG01000041.1| GENE 8 10234 - 11403 1218 389 aa, chain + ## HITS:1 COG:FN0523 KEGG:ns NR:ns ## COG: FN0523 COG0420 # Protein_GI_number: 19703858 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Fusobacterium nucleatum # 1 284 1 284 291 427 78.0 1e-119 MKIVHCSDLHLGKKVSGNREYMKKRYEDFFSSFENFIDKVEEINPDVCIIAGDLFDKREI NPDILSKTENLFKRLRANVKKEIIAIEGNHDNSRFLEESWLEYLQKKGFLNVFYYTKNFE EENYLKIEDINFYPIGYPGFMIDEALTKISKKLNPTEKNIVIVHTGISGGENTLPGLVST SILDLFKDKAIYVAGGHIHSFSTYPKEKPFFFVPGSLEFSNAQNENSDRKGFFLFDTDTL AYSFIETKHRTRIQKSFSYTDLLNIETEFENFVIDLNLTGEEILVVSMGVKNNDYINTEK LENIAENNGALKTHILIKNIFNINNKSNENGASLTISEIEKNLIDSWGIFEKDDFSNNFN TLKELFRSDDEDSFIELFDKILEGTENAN >gi|292606569|gb|ADGG01000041.1| GENE 9 11393 - 11701 436 102 aa, chain + ## HITS:1 COG:FN0522 KEGG:ns NR:ns ## COG: FN0522 COG0419 # Protein_GI_number: 19703857 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 97 1 97 921 112 68.0 1e-25 MLIKKVSLENYRSHSSKVIEFSKGVNLILGKNGKGKTSILEAISSVMFNINDRTGRERGK NYIKYGQQNAKVEIEFTANDDKDYILITTFSQKKPKKTKNHR >gi|292606569|gb|ADGG01000041.1| GENE 10 11742 - 13589 2115 615 aa, chain + ## HITS:1 COG:FN0522 KEGG:ns NR:ns ## COG: FN0522 COG0419 # Protein_GI_number: 19703857 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 2 614 116 729 921 392 60.0 1e-108 MLELLCGIKVGFEKIYENIVIAKQNEFINVFKESPSEREKIFNKIFNTDIYKDMCEFFKL SRDLYKKERDEISTKINFSKENMENKDEVLTSLKNEEEKRDDLENKKNKLTVEVDNLIKK IENYNKTDIELKNLSENYLNEVNKLKKDRITLKENISEAKKAKKARNITKKNEKPYFEYL ESQEKLKKEREELDSFLEEERLNTQCQHNIDKLELSNKNLKTDISNLEENISKNLDKKEN LKNEISDLEIKEQDLSLKLKEYENLLVTLENFEKNKEEKLKQKLKKETEINIFEKDLISK KDLFENINIEDIEKHLLVFQELEKEIKSLEKQKVTFEIEINTLKNASNELSSKICPYLKE NCENLKDKEAEDYFSSKISLKIEELEILKKAIEEKSSILAKKSIFEEKKKEYFELNKTIK DLDFSLKNEELNLKEIDFDIKTLDNDIQKLIENQEIKDSLSLKEKKKELEFELRSLNLEE KRKNLKTIIESLEVDNKKVFKNQDTIKENLSKIEEYSKNIVENTNKKILFSKENINSLEL AIEKLKEFYDEYLKNNGLAKTLETFLLKVEKNIKDLYELRNNKNLLKEEVIILENEIKKI NIAELKENYTIKKKI >gi|292606569|gb|ADGG01000041.1| GENE 11 13760 - 14161 521 133 aa, chain + ## HITS:1 COG:FN0522 KEGG:ns NR:ns ## COG: FN0522 COG0419 # Protein_GI_number: 19703857 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 133 789 921 921 214 90.0 3e-56 MGRSISKYMLANISNIASLNFNKITGRTERIEWSNEDDDKYAVYLVGKGRRIAFEQLSGG EQVSVAIAIRGTMTEYFTNSRFMILDEPTNNLDTERKKLLAEYMGEILKNLDQSIIVTHD DTFREMAEKIIEL >gi|292606569|gb|ADGG01000041.1| GENE 12 14170 - 14835 873 221 aa, chain + ## HITS:1 COG:FN0521 KEGG:ns NR:ns ## COG: FN0521 COG1636 # Protein_GI_number: 19703856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 221 1 222 222 337 90.0 8e-93 MKVNYDLKMEEILKEITESGKKKRLLIHSCCGPCSSSVLEYLKEFFQIDIYFYNPNITFD YEYLARMDEQKEMLEKLDYDMNVIEGVYNPKEDFFEKIKGLENEKEGGQRCYSCYDIRIG ETAKKAKEEGYDFFSTVLSISPMKNVNYINEIGEKYSKEYDIPFLFADFKKKNRYLRSVQ ISKELNMYRQEYCGCVFSKVEKEQRDREKAEKEKQEETKND >gi|292606569|gb|ADGG01000041.1| GENE 13 14828 - 15445 628 205 aa, chain + ## HITS:1 COG:no KEGG:FN0520 NR:ns ## KEGG: FN0520 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 205 1 205 205 336 92.0 3e-91 MTSFSEKTVRGLSLIFLVIFSYLTYKNYYYSPLIILTIMMFFSTKGVQMFENKIFLSTRA IFWVLFSTLLFLRIYLNESSYMDMKNTKTLMTIALISICIGTWVGDFFAKYIYIRIKFCI NRFFSTSNKGTYRIVKMENTQQNYMKSLGKKMGIIFYHITLDVNGEERKFLLEKELFEKL QGKSEININIKKGCLGICYGVGMQE >gi|292606569|gb|ADGG01000041.1| GENE 14 15455 - 16471 1361 338 aa, chain + ## HITS:1 COG:FN0518 KEGG:ns NR:ns ## COG: FN0518 COG2849 # Protein_GI_number: 19703853 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 39 337 1 300 300 375 79.0 1e-104 MKKILVLLIFLFVSILTYSDSAFSYSKSVNIDFDIGIMMGLTKVEKNNNQRYKKFLNYID ENLAKKNEVKYSHKLNIDKRVVEFFSEKGDILLTEELSKEFLDIIDNSIRVAVNKEEIKK TIKNIYEDPYTYVSISKYKENLILFIEENMVNRGKIKNTISVVLKRELTDDEKNDLIYLK DNNSDEFFKKYRTYLESETTKTYINDRLEFFQEIRGLTEITILYKNEISKVVIEYTDDSR INSVYKAYRNDRLLTETFFKNKDIVLEKEYYYNEKLAREIPMKDGLIHGEVKDYYENGKI RAIAPFVNGNVDGILREYNQAGKVIKETLYKNGNKVKR >gi|292606569|gb|ADGG01000041.1| GENE 15 16523 - 17170 782 215 aa, chain + ## HITS:1 COG:FN1075 KEGG:ns NR:ns ## COG: FN1075 COG0596 # Protein_GI_number: 19704410 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Fusobacterium nucleatum # 1 215 1 215 215 362 93.0 1e-100 MNYRIALIHGFFRNYKDMEELENNLMNMGYTVDNLNFPLTFPSIDMSIDILKKYLLSLKE KKINKQNEIVLIGFGFGGVLIRETLKLEEVSGIVDKVILLSSPINDSTLHRRLKRTFPFI DLIFKPLAIYSKTRRDRRRFDKDIEVGLIIGRESSGFFGKWLGDYNDGYIEMKDVAFPAA KDKILIPITHNELNKRIGTARYIHNFIAKGKFRLE >gi|292606569|gb|ADGG01000041.1| GENE 16 17276 - 18148 470 290 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783096|ref|ZP_06748420.1| ## NR: gi|294783096|ref|ZP_06748420.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 290 32 321 321 379 100.0 1e-103 MALYQIYTEKDGFNRGMALIFLIVFSVLLSLIMCNLLKTFLNFFSKKVIISKKTFEKKHF SSLDKFEFFLKIILKIILRVLAYLFVFFLIGVNIVSVADENARDKGTFPLEVVQFFTAIA LIAVLIMLFKDFKKIYLFLSEKHKALPAFNKKVQKNIIKVKTKIKEQLKKIKDKKYSFKD FITKLKSKMNMKFISKFTKLLEDKTNFLKEKLFQERYEIFLNEKADKFLIGAYQVLSAMC LLAFHIIFISILVVLIYKILVFLFYLFGIIITLLIGAVVSFPYILFLFFL >gi|292606569|gb|ADGG01000041.1| GENE 17 18371 - 18622 438 83 aa, chain - ## HITS:1 COG:FN1077 KEGG:ns NR:ns ## COG: FN1077 COG4545 # Protein_GI_number: 19704412 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Fusobacterium nucleatum # 1 83 1 83 83 132 77.0 1e-31 MPKVYGSMLCPDCVEAKEYFEKVNYRYEFVNITESMKNLKEFLALRENRKEFEEIKKLGY VGIPAILTDDNKIILGDEVLQVK >gi|292606569|gb|ADGG01000041.1| GENE 18 18747 - 18938 139 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783098|ref|ZP_06748422.1| ## NR: gi|294783098|ref|ZP_06748422.1| hypothetical protein HMPREF0400_01082 [Fusobacterium sp. 1_1_41FAA] # 1 63 1 63 63 78 100.0 2e-13 MNNTNIENVALKFAILLILMYNIFRTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIK VAV >gi|292606569|gb|ADGG01000041.1| GENE 19 19174 - 20250 1266 358 aa, chain + ## HITS:1 COG:FN0491 KEGG:ns NR:ns ## COG: FN0491 COG0787 # Protein_GI_number: 19703826 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Fusobacterium nucleatum # 1 358 1 359 359 582 85.0 1e-166 MNTSFFVSLDKKALYHNIEYLREYKQKELLPVIKANAYGHDILLIAKALYDYDIKVWAVA RYSEAVSICEYFKTLSIDDFKILIFESLIDDYSLLEKYPQICPTLNSIKDLKNALANNIS IDRLSLKIDFGFGRNGIKYEEVDELKNLIKYNSLKFLSIFSHLFSASYTDGLEVIKKFTD LVNKLGRNNFEMIHLQNAAGIYNYDVDIVTHIRTGMLTYGLQEAGFYDLDMKPVFTGLIG YVDSVRYVNELDYVAYQELSSIDLGTKKIAKIKIGYGDGFSKANNKTTCLIKKKEYVISQ VTMDNTFIEVDDRVNVGDEVHLYHRPNEIKTKTGFSMLELLIAISPLRVKRIFKGEEN >gi|292606569|gb|ADGG01000041.1| GENE 20 20254 - 21036 848 260 aa, chain + ## HITS:1 COG:FN0490 KEGG:ns NR:ns ## COG: FN0490 COG2035 # Protein_GI_number: 19703825 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 260 1 260 260 363 86.0 1e-100 MILLFFKSIIIGVANIIPGVSGGTLAVMLNVYDPITEKIGNFFLVDRKTKFSYFWYLLIV LVGAATGIFLFANIIKYSITNYPKITVSVFTLLILPSIPYIVKGLDYKKKKNILAFCCGA ALMIIFILLGLKYGDKTTGAVTIQIAKGVCFTRAYRLKLFICGIIAAGAMIIPGISGSLL LMMLGEYYNVVYLISSLASSLKEKSFSILLPLITLAVGVGIGLVAFSKAINYLLKNHKEF TLFFIEGIITFSIVQMWLSI >gi|292606569|gb|ADGG01000041.1| GENE 21 21056 - 21922 929 288 aa, chain + ## HITS:1 COG:FN0489 KEGG:ns NR:ns ## COG: FN0489 COG0682 # Protein_GI_number: 19703824 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Fusobacterium nucleatum # 1 288 1 288 288 461 87.0 1e-130 MNPVFLKLGPIELHYYGLMYAIAFYVGITLGKKIAKERNFDVELVENYAFVAIISGLIGG RLYYVLFNLPYYLRNPLEIPAVWHGGMAIHGGIIGGIVGTFIYAKIKKVNPLTLGDFAAG PFILGQAIGRIGNFMNGEVHGVPTFTPFSVIFNLKPKFYEWYSYYQNLDLIEKSKYKELV PWGVVFPESSPAGSEFPNLALHPAMLYEMVLNLIGFFIIWFILRKKENKAPGYMWWWYII IYSINRIIISFFRVEDLMFFNFRAPHVISFILIAISIFFLKKGNKKIL >gi|292606569|gb|ADGG01000041.1| GENE 22 22143 - 23294 2158 383 aa, chain + ## HITS:1 COG:FN0355 KEGG:ns NR:ns ## COG: FN0355 COG0192 # Protein_GI_number: 19703697 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Fusobacterium nucleatum # 1 383 1 383 383 707 89.0 0 MKKFTYFTSEFVSPGHPDKVSDQISDAILDACLADDPNSRVACEVFCTTGLVVVGGEITT TTYIDVQEIVRKKINEIGYRPGMGFDSDCGTLSCIHSQSPDIAMGVDVGGAGDQGIMFGG AVKETEELMPLALVLSREILVRLTKMMKAGEIAWARPDQKSQVTLAYDENGNIDHVDSIV VSVQHDEEVSHAEIEKTVIEKVVNPVLEKYKLNTENIKYYINPTGRFVIGGPHGDTGLTG RKIIVDTYGGYFRHGGGAFSGKDPSKVDRSAAYAARWVAKNVVAAGFADKCEIQLSYAIG VDKPVSIKVDTFGTAKVDEDKISEAISKVFDLSPRGIEKTLELREGKFKYQDLAAFGHIG RTDIDTPWERLNKIKELKKAINL >gi|292606569|gb|ADGG01000041.1| GENE 23 23307 - 23684 480 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237739785|ref|ZP_04570266.1| ## NR: gi|237739785|ref|ZP_04570266.1| predicted protein [Fusobacterium sp. 2_1_31] # 1 125 1 125 125 208 100.0 8e-53 MLKKFSEAQEKGYNYMLFIELGYLTSKNDLSSFQVKAVTIEGYFETIKQIYDYVENIDFE ETEEKDGRYECEVSNIYDVSRKIYFIKNEGLTFTEVDDTDIVDRIVNKGPKEIVGKSKEF LEARL >gi|292606569|gb|ADGG01000041.1| GENE 24 23712 - 24626 1423 304 aa, chain - ## HITS:1 COG:MTH1430 KEGG:ns NR:ns ## COG: MTH1430 COG0115 # Protein_GI_number: 15679429 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Methanothermobacter thermautotrophicus # 6 303 32 330 330 372 60.0 1e-103 MINTEKIWMNGKLVGHDDANIHILSHVVHYGSSVFEGIRIYKTENGPAIFRLREHVKRLF DSAKIYRMEIPYTIEEIEQAIIETVKANKLEQGYIRPIAYRGYFELGVTPSRCPVEVAIA AWAWGAYLGEEALNKGIRVQVSSWRRPALNTLPSLAKAGGNYLSSQLIRLEALNNGYEEG IALDYLGNVSEGSGENLFVVLNGKIITPTLASSALGGITKDTVIQLAKKLGYEVVEQAIP RELLYICDELFLTGTAAEVTPVYSVDDIVVGNGDKTITKALQKEFFDLAHGRHELSEKFL AYVK >gi|292606569|gb|ADGG01000041.1| GENE 25 24700 - 26541 2315 613 aa, chain - ## HITS:1 COG:FN0258 KEGG:ns NR:ns ## COG: FN0258 COG2217 # Protein_GI_number: 19703603 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 12 612 12 612 614 931 86.0 0 MKKKKEIIIAISAILFALTLFIRMPQALQLVLILVAYVLVGKDTVLLAVKNIERGDFLDE NFLMTVATLGAILIGEYPEAVAVMLLYEIGELFQGYAINKSRKSIAAMMDIKPEYANVIR DNKTQRVDPDEVGLGEIIEIRPGERVPLDATIIKGETSLDTSALTGESVPVEVREGANIL SGCININGLITAKVTKEYFDSTVNKVLDLVENAAAKKSKSERLITRFAKVYTPIVIGLAI LLALLPPIISGEYNFRLWVFRALSFLVVSCPCAFVISVPLSFFSGIGAASKAGVLIKGGN YLEALAKVDTVVFDKTGTLTKGVFNVQKVVVHDKNIDENEFMFYVASAESGSNHPISKSI QKYYNKEIDNSSINSIKEISGKGIEAIINNKKVLVGNEKLVNLPKDISVTDVGTILYVEI DNVFSGYIVISDEIKEDAKRAIKELKNIGIKKNIMLTGDLEKVAKKVGEDLELDETYSNL LPQDKVSKFEEIIKNKTSKGSVIFVGDGINDAPVLARADVGIAMGAMGSDAAIEAADVVI MTDEPSKIVTAIKSSKKTMKIAMQNMALAFGIKVIALILSALGIADMWMAVFADTGVTIL AVLNSFRALKVEK >gi|292606569|gb|ADGG01000041.1| GENE 26 26572 - 26787 413 71 aa, chain - ## HITS:1 COG:FN0259 KEGG:ns NR:ns ## COG: FN0259 COG2608 # Protein_GI_number: 19703604 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Fusobacterium nucleatum # 1 71 1 73 73 87 82.0 7e-18 MKKVFKLEGLNCAHCASKIEEKVAKLEGVKSVMVNFMTTKMTLESENMEEVVEKVKKLVN EVEPDVNMIKA >gi|292606569|gb|ADGG01000041.1| GENE 27 26789 - 27175 591 128 aa, chain - ## HITS:1 COG:FN0260 KEGG:ns NR:ns ## COG: FN0260 COG0640 # Protein_GI_number: 19703605 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 4 128 1 125 125 213 88.0 6e-56 MKAIKSVKPVNSCDCDSVNKEIVEKVKKEFPNDEILGDLSDFFKVIGDGTRIRILWALDV SEMCVCDIANVLNMTKSAVSHQLRALREADLVKFRKSGKEVLYSLADNHVKEIFEQGLVH IQEEKGED >gi|292606569|gb|ADGG01000041.1| GENE 28 27365 - 27811 535 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783106|ref|ZP_06748430.1| ## NR: gi|294783106|ref|ZP_06748430.1| hypothetical protein HMPREF0400_01091 [Fusobacterium sp. 1_1_41FAA] # 1 148 1 148 148 278 100.0 6e-74 MDNLDIFENACKYFLEKMTEFKEILSSKVDSLNNKDWVLSKGSTKTCKADETGKKKRCKV GLNYGLKIELSVADVDIIWNEFSSFFTKAYVENIERISNNEEIARYEFLARSSIGDEIRC AIYLANEWNIPQISLSGFVAPRYKKSDY >gi|292606569|gb|ADGG01000041.1| GENE 29 27847 - 29466 1767 539 aa, chain - ## HITS:1 COG:FN0276 KEGG:ns NR:ns ## COG: FN0276 COG1283 # Protein_GI_number: 19703621 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Fusobacterium nucleatum # 15 539 1 525 525 878 90.0 0 MYIKIILQLIGGLGLFLYGMEHMSTSMQKIAGPKLKKILASLTNNRILGILVGIVITALV QSSSVSTVMTVGFVNASLLTLKQALGVILGANIGTTITGWLLVLDIGKYGLPIVGAAAIL YMFMKKEKARTNLSAIIGVGLIFFGLQLMSQALSPLKDMPEFIEMFKMFKVDSYFGLLKV TAVGAIITALIQSSAATIGITIALATQGLIDYQAAVALVLGENVGTTVTAFLASLGAKPN AKRAAFAHTLINLIGVLWVTSIFRFYLKFLNNFVDPVHHMGAAIAAAHTIFNITNVIILI PFVGLLDKILLYIVKDTGEDEQRVTKLASLKMTLPNVIIDQTKIEVSSMVTMINDVFLKL EESLKEKEKIAKYNEEIVAAEDKLDLYEKEIYDSNFSLLSKSLSKSLIEDTRMNLLACDE YETIGDYQNRIGNRLYMLYENSIDLDETRAKMIFKLHSLSVELFNDISRAVKTGEKELYS TGLKKYQELKSYYKEVKREHFSRSENIPARLNTGYLDIINYYKRIADHTYNIIEYVMKI >gi|292606569|gb|ADGG01000041.1| GENE 30 29502 - 30374 929 290 aa, chain - ## HITS:1 COG:FN0277 KEGG:ns NR:ns ## COG: FN0277 COG4866 # Protein_GI_number: 19703622 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 290 1 290 290 442 85.0 1e-124 MWKKLTIESKDTIEEYTKNRFEICDLSFSNLFLWSFGENTEYEIENDVLTIRSEYMGEAY YYMPIPKNDTPENIAAMKEKIKNIIEENVPIHYFTEYWYEKLKDDFNLQEKRDYEDYIYS YESLSTLKGRHYAKKKNRVANFRKNYEYSYESISKDNIGEVIAFQEKWYKLHSEFGGEIL KNENEGIIQLLKNYDSLDIKGGFLKVNNQIIAYSLGEALNDKMVLVHTEKALIDFIGSYQ AINMIYLQEEWQGYELVNREDDFGDEGLREAKMSYKPLYLLKKYSIEKNV >gi|292606569|gb|ADGG01000041.1| GENE 31 30387 - 31745 2024 452 aa, chain - ## HITS:1 COG:FN0278 KEGG:ns NR:ns ## COG: FN0278 COG0624 # Protein_GI_number: 19703623 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Fusobacterium nucleatum # 1 452 1 452 452 830 92.0 0 MDLKEKVLGYKDEVVKEIQNAIRVKSVKEAPLPGMPFGEGPAKALDHFMDLAKKLGFKAE KFDNYAMHIDMGEGDETLGILAHVDVVPEGDNWTYPPYSGTIADGKIFGRGTLDDKGPAI ISLFAMKAIADAGIKLNRKVRMILGADEESGSACLKYYFGELKMPQPTIGFTPDSSFPVT YAEKGSVRVKIKKKFNTLQDVVIKGGNAFNSVPNKANGEIPVDMLGEVRNKNKVEFEREG NIYKVVSAGIPAHGAYPSKGYNAVSALFEVLKDFEVKNEELKSIVTFFDKFVKMETDGES FGVKCTDGETGELTLNLGKIDLENNELEIWLDMRIPVKIKNEQIIETIKKNTEDFGYEFV LHSNTQPLYVPKDSFLVSTLMDIYKDLTGDMDAEPVAIGGGTYAKYANNTVAFGALLPEQ EDRMHQRDEYLEISKIDKLLQIYVEAIYKLAK >gi|292606569|gb|ADGG01000041.1| GENE 32 31788 - 32552 950 254 aa, chain - ## HITS:1 COG:FN0279 KEGG:ns NR:ns ## COG: FN0279 COG2853 # Protein_GI_number: 19703624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Fusobacterium nucleatum # 1 254 1 260 260 374 75.0 1e-103 MKIKKLLLLSILSLSLVSCTNTNDVKVSNTNQTDFSNVVVSPSEGNFIADEYDPWEPFNK RMYYFNYQIEKLVITPVVNTYKFITPDFVENSVTNFFKNTKVLNTMANSAFQFKGRKSMR ALGRFTMNAVLGLGGLFDVASKMGMPRPYEDFGLTLAHYGVGRGPYLVLPLLGPTYLRDA FGTGVDSAIAGQIDVYHRMSLFNTTSAPVTVLRGIDMRKNIDFHYYQTNSPFEYEYVRYL YGKYRGIQEHASEK >gi|292606569|gb|ADGG01000041.1| GENE 33 32542 - 33825 1454 427 aa, chain - ## HITS:1 COG:no KEGG:FN0280 NR:ns ## KEGG: FN0280 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 427 1 427 427 682 83.0 0 MRKTLTKVVLFLLLSLTAFSYNFPIEDPYSATIIGSSTMMTEGIMENIPLKVYEIQIKDP KDIPDAFWYANKFKFSLSKQKNKKAPLIFVLAGTGSDYNAARVKFMQRIFHTAGYHTIAI SSQMSQQFMISASSNSVPGLLMEDNRDIYKAMKLAYDKIKDQVEVTDFYIMGYSLGGTNA AVLSYIDETEKAFNFKRVFMVNPAVELYDSAVKLDKYLGDYTGGKTENIEKLLSTTLARL KNGLTNEYANIGADTIYNIVKGDFLSDEEKKAYIGLAFRLTSNDLNFLSDLLTKSGVYTK PTAKLTKFTNMKPYLKAVNFASFEDYVDKVGLPYYQKQNKASSIDDLKKASSLRLIEDYL RTSPKIVAVTNADELILSQKDIAFLKDVFKDRLIIYPRGGHCGNMFYKENVDTMVKFVNE GVLKYEN >gi|292606569|gb|ADGG01000041.1| GENE 34 33837 - 38168 5033 1443 aa, chain - ## HITS:1 COG:FN0281 KEGG:ns NR:ns ## COG: FN0281 COG2176 # Protein_GI_number: 19703626 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Fusobacterium nucleatum # 1 1443 12 1454 1454 2510 88.0 0 MIEPNMEVFEKLGVKSIEIKNILLNTRTKRITFNCSVSCMGCIDDIDTIYKDVLSKFGRE IEIEFVTENKELKLEDEEIKTIAIRAIERLKSRNTTSKSFLCFYKVYVKNNYIIIELNDE HIKFMLEEVKISSKIESILAEYGLKDYKIMFSVGDFSKEFSNVEEKIKADMEKQQNIISS EREKIIKENSVTETQVYKAKNDFKRGSKTKDIKGDVISIKDFYDLYDGEPCIVQGEIFSI EGMVLKSGKTLKTIRITDGESSLTSKIFLDENDNLDISEGKILKLSGKVQMDTYAGNEKT LMINTVNIIEKEVIKKEDTAEEKMVELHTHTKMSEMVGVTDVEDLIKRAKEYGHKAIAIT DYSVVHSYPAAYKTGKKLSKDDNKMKVIFGCEMYMIDDEALMITNPKDKKIDEEEFVVFD IETTGLNSHTNKIIEIGAVKIKAGRIIDRYSQLINPGISIPYHITEITSITNEQVANQPK IDEVIGKFVEFIGDAVLVAHNAPFDMGFIKRDIKEYLNIDLECSVIDTLQMARDLFPDFK KYGLGDLNKALGLALEKHHRAVDDSQATANMFIIFLEKYKEKGIEYLKDINKGFEVNVKK QSLKNIMVQVKTQEGLKNMYKLVSKGHIKYFGNKKARIPKSVLKENREGLIVGSSLSAHF MNSGELVELYLRHDLEKLEETAKFYDYIELLPKSTYNELIEKEGTGSLVSYDDVEKMNKY FYDLGKRLGILVTASSNVHYLDENEDIIRSILLFGSGTVYSPNQYRVNNGFYFRTTDEML KEFSYLGEQEAKEVIITNTNKIADMVEEGIKPIPEGFYPPKMDNAEEIVRTMTYEKAYRI YGDPLPNIVSARLERELNAIINNGFSVLYLSAQKLVKKSLDNGYLVGSRGSVGSSLVAFM MGITEVNALYPHYICDNPECKHSEFIEKEGVGIDLPDKICPNCGAPLRKDGYSIPFEVFM GFKGDKVPDIDLNFSGEYQSEIHRYCEELFGKENVFKAGTISTLAEKNAEAYVIKYFEKN NLEAAKAEIVRLGRLCQGAKKTTGQHPGGMVIVPQGNSIYEFCPVQRPANDETSESTTTH YDYHVMDEQLVKLDILGHDDPTTIKLLQEYTNMEIKDIPLADKDTLKIFSSTESLGVSPE EIGTEIGTYGIPEFGTGFVRQMLIDTRPTTFAELVRISGLSHGTNVWLNNAQEFVRNGQA TLSQIITVRDDIMNYLIDQGLDNSDAFKIMEFVRKGKPKKEPENWENYSNMMKEKNVPDW YIESCRRIEYMFPKGHAVAYVMMAMRIAYFKVHQPLAFYAAFLSRKADDFDMEVMSKGVL AKQKLEELSKESKLDPKKKNEQAICEIVVELEARGIELLPVDIYLSEGRKFKIEDGKIRI PLIGISGLGGAVIENILKEREETKFISVEDLKRRTKMSQTVANKLKSIGAFSSLSETNQI SLF >gi|292606569|gb|ADGG01000041.1| GENE 35 38220 - 38783 664 187 aa, chain - ## HITS:1 COG:FN0282 KEGG:ns NR:ns ## COG: FN0282 COG4752 # Protein_GI_number: 19703627 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 186 1 186 187 368 97.0 1e-102 MRNKVYLSLVHYPVYNRNKDIVCTSVTNFDIHDISRSCGTYEIKGYRLVVPVDAQKKLTE RIIGYWQDGTGGQYNKDREQAFRVTDVAESIEAVVEEIERIEGQKPLIITTSARIFDNSI SYENLSKQIFEDDKPYLLLFGTGWGLTDEVMAMSDHILEPIRANSKYNHLSVRAAVAIIL DRLFGER >gi|292606569|gb|ADGG01000041.1| GENE 36 38792 - 39487 866 231 aa, chain - ## HITS:1 COG:FN0283 KEGG:ns NR:ns ## COG: FN0283 COG0336 # Protein_GI_number: 19703628 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Fusobacterium nucleatum # 1 225 12 236 238 402 92.0 1e-112 MFEGFVSESIISRAIKFGAVEVNIIDIRDYCFDKHKQADDMPFGGGNGMVMKPEPLFLAL ENLSGKVIYTSPQGKTFNQEIAKELAKEEELTIIAGHYEGIDERVVENKVDMELSIGDFV LTGGELPAMVISDTIIRLLPDVIKKDSYENDSFYNGLLDYPHYTRPAEYKGLRVPEVLIS GNHKKIDEWRLKESLKRTYLRRRDLIEKRELTKLEKKLLDEIKEEIKKEEV >gi|292606569|gb|ADGG01000041.1| GENE 37 39517 - 40032 708 171 aa, chain - ## HITS:1 COG:FN0284 KEGG:ns NR:ns ## COG: FN0284 COG0806 # Protein_GI_number: 19703629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Fusobacterium nucleatum # 1 171 3 173 173 256 89.0 1e-68 MIVAGKVLGSHHLKGEVKVISDLQNIEMLVGNKVILELEDKQQKLLTVKKIAPLVANKWI FTFEEIKNKQDTIEIRNAAIKVRRDIVGIGEDEHLVSDMLGFKVYDVKGDEYLGEITEIM DTAAHDIYVIESEDFETMIPDVDVFIKNIDFENKKMLVDTIEGMKEPKVKK >gi|292606569|gb|ADGG01000041.1| GENE 38 40041 - 40280 405 79 aa, chain - ## HITS:1 COG:FN0285 KEGG:ns NR:ns ## COG: FN0285 COG1837 # Protein_GI_number: 19703630 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Fusobacterium nucleatum # 1 79 1 79 79 120 92.0 7e-28 MENLESLLNFIIKQLVETEDKVNITYEVLDSDVTFKVSVAKGEMGKIIGKNGLTANAIRG VMQAAGVKDKLNVSVEFLD >gi|292606569|gb|ADGG01000041.1| GENE 39 40291 - 40539 293 82 aa, chain - ## HITS:1 COG:no KEGG:FN0286 NR:ns ## KEGG: FN0286 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 82 1 80 80 124 85.0 7e-28 MLMKKSYEFIIQSKKEDIDFINKIVEAYEGAGVVRTLDSTNGIISVISTDDYKDMMREVL IDLGNRWVDLKIIEEGAWKGTL >gi|292606569|gb|ADGG01000041.1| GENE 40 40546 - 41340 854 264 aa, chain - ## HITS:1 COG:FN0287 KEGG:ns NR:ns ## COG: FN0287 COG0030 # Protein_GI_number: 19703632 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Fusobacterium nucleatum # 1 264 1 264 264 427 90.0 1e-119 MDFKHKKKYGQNFLNNKDEILNQIIEVSNIDENDEILEIGPGQGALTNLLVERAKKLTCV EIDKDLEAGLRKKFSSKENYTLVMGDVLEVDLTKYLNKGTKVVANIPYYITSPIINKLIE NKELIDEAYIMVQKEVGERICAKAGKERSILTLAVEYYGEADYLFTIPREFFNPVPNVDS AFISIKFYKDDRYKNKISEDLFFKYIKAAFSNKRKNIVNNLATLGYSKDKIKEILNQVEI SENERAENISIDKFIELIDIFEGR >gi|292606569|gb|ADGG01000041.1| GENE 41 41350 - 41877 747 175 aa, chain - ## HITS:1 COG:FN0288 KEGG:ns NR:ns ## COG: FN0288 COG0634 # Protein_GI_number: 19703633 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 175 1 175 175 288 88.0 5e-78 MNYRIENLIDRKTVENRIKELAKQIEKDYAGEEVYCVGLLKGSVVFLSDLVKEINSPVII DFMSVSSYGSETVSSGDVKILKDTDLDLRGKHVLIVEDIIDTGLTLEHVIRYFKESKGVK TLKTCTLLSKPERRKVNIDIDYVGFDVPDKFVIGYGLDYDQKYRNLPYIAVVVFE >gi|292606569|gb|ADGG01000041.1| GENE 42 41996 - 42307 460 103 aa, chain - ## HITS:1 COG:no KEGG:FN0134 NR:ns ## KEGG: FN0134 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 103 1 103 103 146 83.0 3e-34 MSKRKKNLEKVIQQCQKTLDKIDEELAKPEPKLTPYDIEMRNFDEVPRAILREAKRQIKI MMEVLDKNEYMPSYTYPLIDSYSFDTELSHLLFETESIYKICT >gi|292606569|gb|ADGG01000041.1| GENE 43 42475 - 42846 177 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 122 1 126 126 72 36 1e-11 MKFHFLHENFNVLDLEKSIKFYEEALGLKVEREKFAEDGSYKIVYLGDGITNFQLELTWL ADRTEKYDLGDEEFHLAFEVDDYEGAFKKHTEMGCVVFVNEKMGIYFITDPDGYWIEILP PKK >gi|292606569|gb|ADGG01000041.1| GENE 44 42856 - 43251 561 131 aa, chain - ## HITS:1 COG:FN0357 KEGG:ns NR:ns ## COG: FN0357 COG0355 # Protein_GI_number: 19703699 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Fusobacterium nucleatum # 3 131 6 134 134 173 76.0 7e-44 MLVSVVTQIKKVLEQEAGYLRLRTSEGDIGIMPNHAPLVAELSAGKMEIESPSKDRRDVY FLTGGFLEISNNQATIIADEIFPLDEINIENEQLELEKLKKELELDLTEEEKQKIQKRIK ISSAMIDAKTN >gi|292606569|gb|ADGG01000041.1| GENE 45 43262 - 44650 1909 462 aa, chain - ## HITS:1 COG:FN0358 KEGG:ns NR:ns ## COG: FN0358 COG0055 # Protein_GI_number: 19703700 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Fusobacterium nucleatum # 1 462 1 462 462 863 97.0 0 MNRGTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTD GLKRGMEVIDTGKPITVPVGKAVLGRILNVLGEPVDNQGPVNAETVLPIHREAPEFDDLE TETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVG ERTREGRDLYNEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLL FIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERITSTKSGSITSVQAVYVP ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGREHYEIARK VQEVLQRYKELQDIIAILGMDELSDEDKLTVSRARKIERFFSQPFSVAEQFTGMEGKYVP VKETIRGFREILEGKHDDIPEQAFLYVGTIEEAVAKSKDLVK >gi|292606569|gb|ADGG01000041.1| GENE 46 44893 - 45741 1250 282 aa, chain - ## HITS:1 COG:FN0359 KEGG:ns NR:ns ## COG: FN0359 COG0224 # Protein_GI_number: 19703701 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Fusobacterium nucleatum # 1 282 1 282 282 441 86.0 1e-123 MPGMKEIKSRIKSVQSTRQITNAMEIVSTTKFKKYSKLVSESRPYEESMRKILSHIAAGT KNERHPLFDGREEVKSIAIIVITSDRGLCGSFNSSTLKELEKLVKQNEGKKISIIPFGRK AIDFATKRNYDFSESFSKFSAEEMNKIARDVSEDIVLKYANHEYDEVYLIYNKFISALRY DLTCEKIIPIARMEGEVNSEYIFEPSTEYILSSLLPRFINLQVYQAILNNTASEHSARKN SMGSATDNADEMIKTLNIQYNRNRQTAITQEITEIVGGASAL >gi|292606569|gb|ADGG01000041.1| GENE 47 45753 - 47255 1986 500 aa, chain - ## HITS:1 COG:FN0360 KEGG:ns NR:ns ## COG: FN0360 COG0056 # Protein_GI_number: 19703702 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Fusobacterium nucleatum # 1 500 1 500 500 924 95.0 0 MNIRPEEVSSIIKKEIDNYKKTLEIKTSGTVLEVGDGIARIYGLSNVMSGELLEFPHGVM GMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGDNLLGRVINSLGEPIDGKGE IIADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAI DTIINQKGQNVKCIYVAIGQKRSTVAQIYKKLSDLGCMEYTTIVAATASEAAPLQYMAPY SGVAIGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLER AAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAG ISVSRVGGAAQIKAMKQVASKVKLDLAQYTELLTFAQFGSDLDKATKAQLERGHRIMEIL KQPQYHPYTVEKQVVSFYTVINGHLDDIEISKVRRFEKELLEYLKGNTDILTEIADKKAL DKDLEERLKESIANFKKSFN >gi|292606569|gb|ADGG01000041.1| GENE 48 47280 - 47804 629 174 aa, chain - ## HITS:1 COG:FN0361 KEGG:ns NR:ns ## COG: FN0361 COG0712 # Protein_GI_number: 19703703 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Fusobacterium nucleatum # 1 174 1 174 174 229 89.0 2e-60 MIKSQIGRRYSKAIFDIAEEKNQVKEIYEMLNSAMVLYRTDKEFKNFIRNPLIENEQKKA VLTEIFGKDNSENLNILLYILDKGRINCIKYIVAEYLKIYYRKNRILDVKATFTKELSEE QRTKLINKLSQKTGKEINLEVKVDKSILGGGIIKIGDKIIDGSIRRELDNWKKS >gi|292606569|gb|ADGG01000041.1| GENE 49 47801 - 48292 504 163 aa, chain - ## HITS:1 COG:FN0362 KEGG:ns NR:ns ## COG: FN0362 COG0711 # Protein_GI_number: 19703704 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Fusobacterium nucleatum # 1 163 1 163 163 186 87.0 2e-47 MPIISIDATFFWQIINFFVLLFIVKKYFKEPISKIINERKQKIEAELVEATKNREEAEKL HKEAEAQVLNSRKEASEIVKNAQRKAEEEAHLLIKEARENRENILRATELEVTKIKNDTK DELGREVKNLAAELAEKIIKEKVDDNQETSLIDKFIAEVGEDK >gi|292606569|gb|ADGG01000041.1| GENE 50 48337 - 48606 533 89 aa, chain - ## HITS:1 COG:FN0363 KEGG:ns NR:ns ## COG: FN0363 COG0636 # Protein_GI_number: 19703705 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 1 89 1 89 89 126 100.0 9e-30 MDLLTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILG QAVAESTGIYSLVIALILLYANPFLSKLG >gi|292606569|gb|ADGG01000041.1| GENE 51 48639 - 49388 623 249 aa, chain - ## HITS:1 COG:FN0364 KEGG:ns NR:ns ## COG: FN0364 COG0356 # Protein_GI_number: 19703706 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Fusobacterium nucleatum # 32 248 1 217 218 323 88.0 2e-88 MRLGPIEFTTGELVSGPSKIFSIFGFPITSTVVTTWFILLCFFVFFKLGTRNLQLIPGKF QSILEGIYEFLDGTIGQILGTWKKKYYTFFATLFLFIFLSNIITFFPIPWFGVKNGVFEI FPAFRSPTADLNTTVCLALIVTFLFISINIKNNGILGYLKGFGDPTPVMVPLNIVGEFAK PLNISMRLFGNMFAGMVIMGLIYMAVPYFIPAPLHLYFDLFAGLVQSFVFVTLSMVYVQG SLGDAEYTE >gi|292606569|gb|ADGG01000041.1| GENE 52 49416 - 49793 211 125 aa, chain - ## HITS:1 COG:no KEGG:FN0365 NR:ns ## KEGG: FN0365 # Name: not_defined # Def: ATP synthase protein I, sodium ion specific # Organism: F.nucleatum # Pathway: not_defined # 20 123 1 104 105 121 78.0 9e-27 MEDIKNLFKKTIITTIICFLLGLVFQNKYLFFGIGGGCAISVIALYLISVDSKAITYSKD VKVAKRIAYIGYAKRYFLHLLFFVALFYFFNDFRLFLCGFIGTLNVKLTIYCMNILKKIR SFFNS >gi|292606569|gb|ADGG01000041.1| GENE 53 49817 - 50035 183 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262066577|ref|ZP_06026189.1| ## NR: gi|262066577|ref|ZP_06026189.1| putative ATP synthase protein I [Fusobacterium periodonticum ATCC 33693] # 1 72 1 72 72 79 100.0 6e-14 MKIFDKDFFRYLALFTEIGLTLFINVFIAIYLYYLFEKYLFKSFILLIFMILLGIVNGFY SVYKLIFPKNKK >gi|292606569|gb|ADGG01000041.1| GENE 54 50049 - 51407 2287 452 aa, chain - ## HITS:1 COG:FN0366 KEGG:ns NR:ns ## COG: FN0366 COG1109 # Protein_GI_number: 19703708 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Fusobacterium nucleatum # 1 452 1 452 452 759 89.0 0 MGRYFGTDGIRGEANKELTVEKALRLGYALGYYLKNAYKNEEKIKVVMGSDTRISGYMLR SALTAGLTSMGIYIDFVGVIPTPGVAYITKLKKAKAGIMISASHNPAKDNGIKIFNSNGF KFSDEIENKIEDYMDDLNSILVDPLPGDKVGKFKYAEDEYFLYRDYLSHCVKGNFKDIKI VLDTANGAAYRAAKDVFLDLRAELVVINDAPNGRNINVKCGSTHPEILAKVVVGYEADLG LAYDGDADRLIAVDKFGNIIDGDKIIGILALGMKNAGTLKNDKVVTTVMSNIGFEKYLKE NNIELLRANVGDRNVLEMMQKEDVAIGGEQSGHIILKDYATTGDGILSSLKLVEVIRDTG KDLHELVSAIKDAPQTLINVKVDNAKKNTWDKNEKITSFIAEINKKHSDEVRILVRKSGT EPLIRVMTEGENKQLVHKLAEDIAKLIETELN >gi|292606569|gb|ADGG01000041.1| GENE 55 51429 - 51944 292 171 aa, chain - ## HITS:1 COG:FN0367 KEGG:ns NR:ns ## COG: FN0367 COG4769 # Protein_GI_number: 19703709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 171 1 171 172 211 92.0 5e-55 MIKKEYREEIYLIALVLLGLYLSLIENIIPKPFPWMKIGLSNISVLIALEKFNSKMALQT ILLRVFIQALMLGTLFTPNFIISFSAGLVSTLFMIFLYKFRKYLSLLSISCISAFMHNLL QLTVVYFLMFRNISLNSKSIIIFIIFFLGLGVIMGLVTGIIATRLNLKRNK >gi|292606569|gb|ADGG01000041.1| GENE 56 52173 - 53606 1910 477 aa, chain - ## HITS:1 COG:FN0368 KEGG:ns NR:ns ## COG: FN0368 COG0015 # Protein_GI_number: 19703710 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Fusobacterium nucleatum # 1 477 1 477 477 883 94.0 0 MNNEIYSNPLCERYSSKEMMYNFSPDKKFSTWRKLWIALAESEKELGLDISQEQIDEMKK NIHNIDYELAAKKEKEFRHDVMAHVHTFGTQAPLAMPIIHLGATSAFVGDNTDLIQIKDG LEIIKAKLVNVMNNLSKFALENKDVATLGFTHFQAAQLTTVGKRATLWLQSLLLDLEELE FRENTLRFRGVKGTTGTQASFKDLFNGDFSKVEELDVLVSKKMGFDKRFAVTGQTYDRKV DSEIMNLLANIAQSAHKFTNDLRLLQHLKEVEEPFEKSQIGSSAMAYKRNPMRSERISSL AKFVIALQQSTAMVASTQWFERTLDDSANKRLSLPQAFLAVDAILIIWNNIMEGLVVYNK IIEKHIMSELPFMATEYIIMECVKAGGDRQELHERIRVHSMEAGKQVKVEGKDNDLIDRI VNDDYFKLDKAKLLSILEPKNFIGFAAEQTEKFVNIEVKPILEKYKALLGMDSELKV >gi|292606569|gb|ADGG01000041.1| GENE 57 53599 - 54030 189 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Anaerococcus prevotii DSM 20548] # 1 137 1 141 146 77 35 5e-13 MIKKLTINDVDYIEQIFNLEKDIFKNSAFSKESTENLVKADNSFIYAYLIDEKVCGYLMV LDSIDVYEILAIATIEECRNKGIAQELLDKIKTKDIFLEVRKNNEKAINFYKKNNFKQIS IRKGYYSDPTEDAIIMKMEANNE >gi|292606569|gb|ADGG01000041.1| GENE 58 54049 - 55074 1283 341 aa, chain - ## HITS:1 COG:FN0370 KEGG:ns NR:ns ## COG: FN0370 COG0681 # Protein_GI_number: 19703712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Fusobacterium nucleatum # 1 320 1 283 286 358 61.0 7e-99 MKTILYGIFYFFLTLFFAYIFIKEKDLAKKFDTRREKFVNKIVKNEKKVKSFKKILYYVE TIGSALILVVVIQKFYIGNFKIPTGSMIPTIEVGDRVFADMVSYKFTGPKRNSIIIFDEP MRDEDFYTKRAMGLPGETIRIQDGSLYINGEKTDFRRYSNDGIGEQEWKIPQKGDKLEII PAGKYREALENAGVNVDAIVEEAFYKESFEFFKNVYYGLKHKIFDKLKIKYDINEYVNHR NDYRKQGSLTIVEMIMPNLKFVVNGEETGPILDFISDEKVRNKLLNGETVEIILEDDYYL ALGDNTDNSKDSRYIGFIKKSRMKGRVLVRFWPLNRIGLVK >gi|292606569|gb|ADGG01000041.1| GENE 59 55265 - 56029 826 254 aa, chain + ## HITS:1 COG:no KEGG:FN0371 NR:ns ## KEGG: FN0371 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 251 1 252 255 246 60.0 5e-64 MKKNFFILSLILFIFYSFNLFALNFPKKADKIEDFIPKGWKSIIIKKGDLNKDKIDDVVL IIEKNDPKNFKKNEESYQTSPENYNPRIILVLFKDKNSKYTLVAKNDKGFIISPGEAYES GLQNLESPDFDNDLSKSVTIKNNTLHIFTFAELTRSSGSSIYVFRYQNNRFELIGLENQN IFANAEYIDTYNYSFNFSTKKLKIHNLREKLESNMRKEEKIEKRLNIKESYILDTMLETT GVDILDKYAHEIKK >gi|292606569|gb|ADGG01000041.1| GENE 60 56049 - 56792 748 247 aa, chain + ## HITS:1 COG:no KEGG:FN0371 NR:ns ## KEGG: FN0371 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 245 1 249 255 217 56.0 3e-55 MKKKGLFFSFLLFIVCSFNLLAENFPQKANKVEDFIPKGWKSVVFKKGDLNKDKIDDVVL VIQKDDAKNFEKSEDNTILNYNPMAILVLFKNKNSQYNLISKNENGFIVSKDKALVEQLE TLSSPDLDDDLSKSINIKNDTLRLLTRSEYVKGARVTEYIFRYQNNKFELIGLEYKYWHT STEYAVDIAYSINFSTKKLIGTKDISGVRTDETKIEKVEKNIDVKDKYILDTMAQDTGIK ILEKYDN >gi|292606569|gb|ADGG01000041.1| GENE 61 56823 - 57587 933 254 aa, chain + ## HITS:1 COG:no KEGG:FN0371 NR:ns ## KEGG: FN0371 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 251 1 252 255 227 56.0 3e-58 MKKKGLFFSFLLFILCSFNLLAENFPQKASKVEDFIPKGWKKLIVEKGDLNKDKIDDVVL VIEKNDPKNFKKIEDSSRSNPVNFNPRIILVLFKDKNSKYTLVAKNDKNFIVSPGYASEE GLETLDSPDYDDNLSKAVTIKNNTLRIFTLADYIKAATSTAYIFRYQNNRFELIGLDAQS ILGDTEYANTRNYSLNLSTKKLIIHNMSEKLESNVKKEEKIEKNLNITEIYALDTMSETS GVDILDKYVHEIKK >gi|292606569|gb|ADGG01000041.1| GENE 62 57669 - 58433 916 254 aa, chain + ## HITS:1 COG:no KEGG:FN0371 NR:ns ## KEGG: FN0371 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 251 1 252 255 233 57.0 4e-60 MKRKYFFFSFLLFIFCSFNLLAINFPQKASKVEDFIPKGWKKLIVEKGDLNKDKIDDVVL VIEKNDPKNFKKIEDSSRSNPMNFNPRIILVLFKDKNSKYTLVAKNDKNFIVSPGYASEE GLETLDSPDYNDNLSKAVTIKNNTLHIFTLADYIKYATSTTYIFRYQNNRFELIGLDAQN ISGDTEYVDTTNYSLNLSTKKLIIHNMSEKLESNVKKEEKTEKNLNITEIYALDTMSETS GVDILDKYVFEIKK >gi|292606569|gb|ADGG01000041.1| GENE 63 58533 - 61091 2751 852 aa, chain + ## HITS:1 COG:FN0374 KEGG:ns NR:ns ## COG: FN0374 COG0608 # Protein_GI_number: 19703716 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Fusobacterium nucleatum # 1 852 1 844 844 1216 76.0 0 MKKNTKWIVENKINYERIFENKGEKKLDFVIESLIENRNLSLDTNFDFNPFDLKDIDIAV KRIFKAIENNEKIYIYGDYDVDGITSVSLLYLALSELGGNIDYYIPLRDEGYGLNKDAIQ SLKEEEANLVISVDCGINSIEEINLANELGLDFIITDHHEIIGNLPKAFAVINPKREENI YSYKYLAGVGTAFMLVYALYSKLDRLNDLEKFLDIVAIGTVADIVPLTSDNRKFVKRGLK LLNSTRWIGIKQLLRKVFPEDWDTREYCSYDVGYLIAPIFNAAGRLEDAKQAVSLFIEED GFKCLTIIEQLLANNSERKNIQKKILEASVAEIEKKELYNKNLILVANKSFHHGVIGIVA SKILDKYYKPSIIMEIKESEGVATASCRSIDGLNIVECLNSVSDILVKYGGHSGAAGFTI KIENIEEFYQRVDKYIGENFSKDLFVKNIKIENILAPYKVNYEFLRELEILEPYGAKNHT PIFAFKNCEYENLRFTRNSTEHLMLDIKKDNYYFKNCIFFGGGDYYDIIANSKKIDVAFK LKLETFKDRYMCKLQLEDIKNSMENTDFNDNYLELNGRDISFPIRTVVYPKRPDVENPLN LIFNDYGLAITKDRTIIENIDVNLANILKVLKNEFNYNFSVEIEKKYLKTENINLHLKID IDRNIILKTFPVKEALIFQEIKKELISNFDYNSIQKKVLASIFKDKKATLVVMEKGRGIR TIIETIKKYYLYKGKTISINDSSKKADFYIFTFDFKHEVDLENVMQTIGKYNSNNVLIIT NKEFELPKFNTIKDEYTVAKNIEYLPYSEIDKIKKSDIFYYPFLTNEEKEKILNLISQEK KIFSTREIIVHF >gi|292606569|gb|ADGG01000041.1| GENE 64 61243 - 62277 1570 344 aa, chain + ## HITS:1 COG:FN0375 KEGG:ns NR:ns ## COG: FN0375 COG1840 # Protein_GI_number: 19703717 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 344 10 352 352 639 95.0 0 MAIGMVMFVACGGEKEKTETAATPEAQGSNELVIYSPNADDEVNKIIPAFEEATGIKVIL QSMGSGDVLARIGAEKENPQADINWGAISMGVLATTPDLWESYTSENEKNVPDAYKNTTG FFTNYKLDGSAALLVNKDVFAKLGLDPEKFNGYKDLLWPELKGKIAMGDPTASSSAIAEL TNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKATADGEYAVGVTYENPAVTL LQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDEGQKIVAETSTRPV NTSIKNTSEFIKPFEEIKVAYEDIPYCAEHRKEWQERWTNILTK >gi|292606569|gb|ADGG01000041.1| GENE 65 62292 - 63404 1437 370 aa, chain + ## HITS:1 COG:FN0376 KEGG:ns NR:ns ## COG: FN0376 COG3842 # Protein_GI_number: 19703718 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Fusobacterium nucleatum # 1 370 1 371 371 646 90.0 0 MSVNIIIKNAQKRYGDNIIIEDLSLDIRQGEFFTLLGPSGCGKTTLLRMIAGFNSIENGD FYFNEKRINDLDPSKRNIGMVFQNYAIFPHLTVEQNVEFGLKNRKVSKDAMKVETDKFLK LMQIDEYRDRMPDRLSGGQQQRVALARALVIKPDVLLMDEPLSNLDAKLRVEMRTAIKEI QNSIGITTVYVTHDQEEAMAVSDRIAVMKDGAIQHLGQPKDIYQRPANLFVATFIGKTNV LRGTLDGTTLKIAGKYDINLTNIKDKNVKGNVTISIRPEEFVIDESQAKDGMKAFIDSSV FLGLNTHYFAHLENGEKLEIVQESKIDNIIPKGTEVYLKVKQDKINVFTEDGSKNILEGV NNDIGVAYAK >gi|292606569|gb|ADGG01000041.1| GENE 66 63394 - 65040 1601 548 aa, chain + ## HITS:1 COG:FN0377 KEGG:ns NR:ns ## COG: FN0377 COG1178 # Protein_GI_number: 19703719 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Fusobacterium nucleatum # 1 548 3 550 550 852 95.0 0 MLSKKKDIWIVISLCVLAFYIVFMIYPLGILFKNAVIENNGDFTFAYFAKFLSKNYYFST IFNSFKVSLAATALTLIIGTPLAYFYNMYKIKGKTFLQIIIILCSMSAPFIGAYSWILLL GRNGLITNTIKNLTGFNFPSIYGFGGILLVLCMQLYPLVFLYVSGALRNIDNSLLEASEN MGCTGTKRFFKIIIPLCIPTILAAALMVFMRAFADFGTPLFIGEGYRTFPVEIYNQFMNE TGSDKNFASAVSIIAIIITSLIFLLQRYINGKYKFTMNALHPIEAKEIKGIKSVLIHLFC YLIVFVSYAPQLYVIYTSFQNTSGKLFTKGYSLKSYTEAFSKLGNAIQNTFLIGGLSLIL IIVISILIAYLVVRRNNFINRTIDTLSMVPYVIPGSVVGIALVSAFNKKPFVLVGTFLIM VISLIIRRNAYTIRSSVAILQQIPLSIEEASISLGASRMKSFFKITTPMMMNGIISGALL SWITIITELSSSIILYNYKTITLTLQIYVYVSRGSYGIAAAMSTILTLMTVISLLVFMRV SKNKNIMM >gi|292606569|gb|ADGG01000041.1| GENE 67 65087 - 65884 1141 265 aa, chain - ## HITS:1 COG:FN0388 KEGG:ns NR:ns ## COG: FN0388 COG3315 # Protein_GI_number: 19703730 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Fusobacterium nucleatum # 1 265 5 269 269 467 91.0 1e-132 MKIKLDGVAETLLITLNARAKDYENPKSVLHDKKSFEIASQLDYDFKKFDTAWASYYGIL ARAYIMDEEVKKFIERYPDCVIVSIGCGLDTRFERVDNGKITWYNLDLPEVIETRKLFFI EHDRVKNISKSVFENEWTKEVITDGKELLIISEGVLMFFTEDEVKKVLEILVNNFEKFEL HLDLLYKGTIRMTAKHDTLKKMNNVKFKWGVKDGSEVVKLEPKLKQIGLINFTKKMSKIL PLSKKIFIPIFWLMNNRLGMYTYNK >gi|292606569|gb|ADGG01000041.1| GENE 68 66032 - 66748 1055 238 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 238 1 228 228 236 64.0 2e-62 MKKLLAGLLLVGSVLSFGAQRMQVEKMVMNGDLFYVQGEQKPYSGEIEKKYPSGKTLGLA TIKAGKLEGKVYEYYENGKVKSEGNYVNGKAEGVEKNYYKSGKLESEVPFKNAKREGVVK YYNENGMLVAEVPYKNDVTSGLGKQYNEKTGKLEYEVTLANGVRNGLSKNYYPSGKLLSE VNYKNDIQDGPAKFYYENGKLQAEGTYKNGEVEGVATTYDENGKILQQVTYKNGKEVK >gi|292606569|gb|ADGG01000041.1| GENE 69 66880 - 67374 766 164 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 15 155 1 146 228 77 39.0 2e-14 MKKLLVALLLVVSSVLSFGAEKVPYEKLSFSNGYIYYNNQEFTGEFEKKDPNTGIVKMVA SVKNGKLHGMSYTYDEIGRLIEETPYKNGLREGTGKAYYKSGVVSAKLTYKNDEYEGVQK YYYENGKLQTEIPTSQGVVTGAVKLYDKRGRFEGELYHMMRKKL >gi|292606569|gb|ADGG01000041.1| GENE 70 67397 - 67894 718 165 aa, chain - ## HITS:1 COG:FN0025 KEGG:ns NR:ns ## COG: FN0025 COG2849 # Protein_GI_number: 19703377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 165 1 166 166 89 38.0 3e-18 MKKLLVGLLLVASSVLSFGAQRVPYEKLSFPGGYISYNDEKFTGEFERKDPRTGKINMVG SVKNGELHGTSYSYDENGKVTEEITFKKGMKEGASKLYHPSGAVAAKLNYKNDRYEGLQK YYYENGKLQAEIEMSKGQLDGVTKMYDENGKLKEEIIYKNGKKVK >gi|292606569|gb|ADGG01000041.1| GENE 71 68036 - 68752 1076 238 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 238 1 228 228 289 78.0 3e-78 MKKLLAGLLLVSSVLAFGAQRVPIEKVVVNGDLLYVEGEQKPYSGEIERKYPNGKTLGVA TIKEGKLDGKVYEYYENGKVKSESNYVSGKIEGVAKSYYQNGKVEYETSFKNDKKEGIEK FYIETGILVSEVPFKNDEATGLAKLYNEKTGKLEYETTVVNGQRNGLSKKYYPSGKLLSE VNFKNNKEEGLMKAYYENGKLQGEAPYKNGQLDGVAKLYDESGKVIEEATFKNGKQVK >gi|292606569|gb|ADGG01000041.1| GENE 72 68823 - 69710 983 295 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 15 264 2 225 228 178 46.0 1e-44 MKKILLGLLLLSSALSFGATQRISLEKLETNESKDILYLAGTKTPYSGEAEIRYPSGQLL SVATFKNGKINGKAYEYYPSGQLKLEENYTNGKNNGLSKSYYENGQLRLEENYINGKLNG LSKSYYENGQLQDEIPYKNDKKEGIVKTYIENGTLISEVTFKNGVVVGKSKLYNTKTGKL ASVSNINNRKIEGVSREYYPSGKLLSEVRYNKNGRIDGIAKVYNEQTGKLEREIPHKDGK IEGIEKIYDEKGKLIGTITFENNQIMEEVTYKDGKIIDQKIYPLGKDLENELLKK >gi|292606569|gb|ADGG01000041.1| GENE 73 69734 - 70459 1056 241 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 14 241 1 228 228 268 68.0 9e-72 MKKLLLGLLLISSVLSFGATQRVGIEKLVTNENRDTLYLEETKKPYSGEVERKYPDGKLL GIATVKDGKFNGKSYEYYENGKLKIEENYVNGKSEGVAKVFYPNGKVKYETPYKNDKKEG VEKFYSENGILMSEIPFKNDVVIGVTKLYNAQTGKLEYEENLVNGKRNGLSKKYYPSGKV LNEVNFKDDKEEGIMRVYYETGKLQGEIPYKNGQVDGVVKAYDENGKLIEQAVYKNGEEV K >gi|292606569|gb|ADGG01000041.1| GENE 74 70611 - 71336 1101 241 aa, chain - ## HITS:1 COG:FN0024 KEGG:ns NR:ns ## COG: FN0024 COG2849 # Protein_GI_number: 19703376 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 15 241 2 228 228 285 74.0 5e-77 MKKLLVGLLLVSSALSFAATQRVPLEKLGPRGNGRELYLEGQAKPYSGEVERKYPNGKLL GVATMKDGKLEGKAYEYYESGKVFKEEIYVNGTANGVAKSYYENGKVQYETKFVNGKREG IEKGYTNTGVLVSEIPYKNGEANGLAKLYNEQTGKLEYETNVINGLRNGLSKEYYPSGKL VNEVNFKNDIEDGITKIYYESGKLKGEAAYKNGQLDGLAKIYDENGKLVEQATYKNGQKI K >gi|292606569|gb|ADGG01000041.1| GENE 75 71497 - 71631 164 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291460857|ref|ZP_06600222.1| ## NR: gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 44 1 44 44 71 95.0 1e-11 MEILDKKSNRMSRANSGVFECSEFPDFLEALSNLLLRASYDADS >gi|292606569|gb|ADGG01000041.1| GENE 76 71703 - 72131 567 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783152|ref|ZP_06748476.1| ## NR: gi|294783152|ref|ZP_06748476.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 142 1 142 142 200 100.0 2e-50 MKIRKYFLLVMTLVLINFVNLSASQKRLGEKEATGSLVSSTKLNLVQKNDKKTFTIEVYR SNGKLSTKSEYELEDKDKNIEKNEIKKLYEEVKSGKIDYSSKIIEEYHENGNLKTRLTDN HVKEKLEEYDENGKLIRVENGE >gi|292606569|gb|ADGG01000041.1| GENE 77 72165 - 73664 2008 499 aa, chain - ## HITS:1 COG:FN0023 KEGG:ns NR:ns ## COG: FN0023 COG1288 # Protein_GI_number: 19703375 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 499 1 499 499 844 95.0 0 MKKIKMPDTFVIIFFVVLFASLLTYIVPVGKFEMQEVTYITNTGAEKTRNVPVPGSFSYE LDDQGNELKKGIKIFEPGGEVGVTNYIFEGLASGDKWGTAVGIVAFLLVVGGAFGIILKT GAVESGIYSMISKSKGSELVLIPVIFILFSLGGAVFGMGEEAIPFAMLIIPIVIDMGYDS VTGILITYISTQIGFATSWMNPFSVAVAQGVSGIPVLSGAGFRMFMWTFFTAFGVIYTIF YARRVKRNPESSIAYKTDAYFRNNFKSEEQANREFKLGHKLIILVLILGMAWVVYGVIKE GYYLPEIATQFVIMGLIAGVIGVVFKLNNMSVNDIATSFRKGAEDMVGAALVIGMAKGIV LILGGTSADTPTILNTILNYVASGLSNMSAAFCAWVMYIFQSIFNFFVVSGSGQAALTMP IMAPLSDLVGVTRQVAVLAFQLGDGFTNMIVPTSGILMAVLGIAKIEWGVWAKYQIKFQL ILFALGSCFVFAAVLTNFS >gi|292606569|gb|ADGG01000041.1| GENE 78 74069 - 74245 352 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783154|ref|ZP_06748478.1| ## NR: gi|294783154|ref|ZP_06748478.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 58 1 58 58 67 100.0 3e-10 MTKKLENFIDNIIEEKKEQFKGLIGKENRVENMIEDLKTLNLSNDKLEEVIKVAKKHM >gi|292606569|gb|ADGG01000041.1| GENE 79 74754 - 75566 966 270 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783155|ref|ZP_06748479.1| ## NR: gi|294783155|ref|ZP_06748479.1| hypothetical protein HMPREF0400_01140 [Fusobacterium sp. 1_1_41FAA] # 1 270 10 279 279 445 100.0 1e-123 MQNNFDLKEIEKLKELGDILKIKFIPDLYKVYNIETPFNKFFVHRDDLDEYTDEIQKEFD ELFMTLFGVYILDKKEYFNLMETLRVRMELADDVFKKLRREVTLILKRTEKKNVSDNGEV CFQMWRSEQRQKFLSKVYNLEETGKQFKMLVEITYDKGVIEFLKKENHNLESLRNVFCLI YNEREWHYRLLEEMLLYDLRVSSDKIRYFEKVIVKNIGEKLMANFTNIEKACIINEGKEK NIFAFDNFELEIILETETDRKVKVPKKIFK >gi|292606569|gb|ADGG01000041.1| GENE 80 75749 - 75889 108 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLEKKIKELRKVKRYSKQEMPDLLEIKKITYFKYESGEIEVTLSIF >gi|292606569|gb|ADGG01000041.1| GENE 81 76016 - 76195 297 59 aa, chain + ## HITS:1 COG:no KEGG:FN1884 NR:ns ## KEGG: FN1884 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 57 1 57 59 67 89.0 1e-10 MVSCENMKKGEVYKCQCCDFEIEVKNACDCGTNDNCETHDASHECCEFTCCGKPLVKKG >gi|292606569|gb|ADGG01000041.1| GENE 82 76316 - 76705 526 129 aa, chain + ## HITS:1 COG:FN1881 KEGG:ns NR:ns ## COG: FN1881 COG0824 # Protein_GI_number: 19705186 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 1 129 1 129 129 202 83.0 1e-52 MFTFNYTIKQEDLNYGNHVGNERALLFFQWAREEFLRANNLSETDIGDGSGFIQTEATVQ YKKQLFLNQEIKINITKIEIKGLRIIFEHEIFCGEDLAITGTATVLAYNYEEQKVKKVPT SFKTLVENY >gi|292606569|gb|ADGG01000041.1| GENE 83 76768 - 76902 156 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291460857|ref|ZP_06600222.1| ## NR: gi|291460857|ref|ZP_06600222.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 44 1 44 44 71 95.0 1e-11 MEILDKKSNRMSRANSGVFECSEFPDFLEALSNLLLRASYDADS >gi|292606569|gb|ADGG01000041.1| GENE 84 76975 - 78600 1656 541 aa, chain - ## HITS:1 COG:FN0682 KEGG:ns NR:ns ## COG: FN0682 COG1293 # Protein_GI_number: 19704017 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Fusobacterium nucleatum # 1 541 1 541 541 766 86.0 0 MLYMDGISLSKIKEELKKTLEGKRINRIFKNNEYTISLHFGKIELLFSCIPALALCYISK NKEQAILDISSSLISNLRKHLMNAMLTDIEQLGFDRILAFHFSRINELGEIKKYKIYFEC LGKLSNVIFTDEEDKVLDTLKKFHISENIDRTLFLGETYSRPKYDKKILPTELNKDKFDS LLASGNVFSNEIEGVGKYLNNIKFFEEFTNILNSPVKAKIYFKDKKIKLATVLDLDFKDY DEVKEFSSYDEMINFYIDYEHTTTSYMLLKNRLESFLEKKLKKLNKILSLIKKDIEDSET MESIKEKGDILASVLYNVKKGMNSVKAYDFYNNEEIEIELDSLISPKENLDRIYKKYNKV KRGLTNAIRRDKEIREEISYIESTLLFIESSTDVSSLREIEEELIKLNYIKSLHNKKKTK LKKEVKYGLIEGEDYLILYGRNNLENDNLTFKISEKNDYWFHVKDIPSSHIILKATKLTD ELIVKAAQVSAYYSKANLGEKVTVDYTLRKNVSKPNGAKPGFVIYVSQKSVVVEKVELDK I >gi|292606569|gb|ADGG01000041.1| GENE 85 78602 - 79279 975 225 aa, chain - ## HITS:1 COG:FN0681 KEGG:ns NR:ns ## COG: FN0681 COG1846 # Protein_GI_number: 19704016 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 1 225 1 225 225 375 92.0 1e-104 MTVNIQRVNDVLEEYYKLFYKTEDMALKRGIKALTHTELHIIESVGQDTQLTMNELADKI GITMGTATVAISKLSDKGYIDRARSTTDRRKVFVSLTKKGIDALTYHNNYHKMIMASITE SIPEKDLQKFVETFEIILDSLRNKTDYFKPMTITDFKEGTKVSIVEIKGTPIVQNYFLSH GIENFTLLKVLKSGDKSLFKIEKEDGEVLTLDILDAKNLIGVKAD >gi|292606569|gb|ADGG01000041.1| GENE 86 79294 - 79941 742 215 aa, chain - ## HITS:1 COG:FN0680 KEGG:ns NR:ns ## COG: FN0680 COG0036 # Protein_GI_number: 19704015 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Fusobacterium nucleatum # 1 214 1 214 215 381 92.0 1e-106 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRADIDIEVDGGITDET IKVCADAGANIFVAGSYVFSGDYKERIDLLKSKAN >gi|292606569|gb|ADGG01000041.1| GENE 87 79934 - 80737 651 267 aa, chain - ## HITS:1 COG:FN0679 KEGG:ns NR:ns ## COG: FN0679 COG1162 # Protein_GI_number: 19704014 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 264 22 285 285 439 87.0 1e-123 MRGILKKTNNKYNCVVGDRVEISEDNAIVEIFERENMLIRPIVANVDYLAIQFAAKHPNI DYERINLLLLTAFYYKVKPLVIVNKIDYLSEEELTELKERLAHLKSIGVPTFLISCQENI GLQEVEDFLKDKTTVIGGPSGVGKSSLINFLQSERVLKTGEISERLQRGKHTTRDSNMIR MKAGGYIIDTPGFSSIEVPKIENREELISLFPEFTNIDSCKFLNCSHIHEPNCNVKKAVE ENKISQDRYNFYKKTLEILSERWNRYD >gi|292606569|gb|ADGG01000041.1| GENE 88 81094 - 81684 804 196 aa, chain - ## HITS:1 COG:FN0678 KEGG:ns NR:ns ## COG: FN0678 COG2815 # Protein_GI_number: 19704013 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 196 1 200 200 282 76.0 3e-76 MKKFRNNNDEDEFEDIEVEATSAKQPEKDNRRLIKIILNIILIIAIIKVGLGVFERYYFN EFYYKAPNLTGLSIEEAKKTISKSPLNIREMGEVYSDLPYGTVALQEPAEGTIVKRSRNM KVWISKESPSVFLDDLVGMNYIEASSLLNKNGMKVGEVKKMRSDLPINQIIATSPKSGEP ISRGQKFDFLISNGLE >gi|292606569|gb|ADGG01000041.1| GENE 89 81881 - 82507 475 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783164|ref|ZP_06748488.1| ## NR: gi|294783164|ref|ZP_06748488.1| hypothetical protein HMPREF0400_01149 [Fusobacterium sp. 1_1_41FAA] # 1 208 1 208 208 296 100.0 7e-79 MDCQDLEIIKNDIEKFIKQLELKSKNKVIFTDDEKSFLRFLAKHILFFKELYRFDKSKYF LEVLISDIFSYIISIIDGEKRYIFLNERSIIENYIRYLMKENHIKENTFYKLKEKFKLEN DVFSLLKEEYSTSCKYIHGGEILKTELLFYFFEFLKKEKEIFRDVKYYKRIKKMLNIYDK LILKEDEDFINGVFHRRKTLLKFLIKID >gi|292606569|gb|ADGG01000041.1| GENE 90 82508 - 82867 348 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783165|ref|ZP_06748489.1| ## NR: gi|294783165|ref|ZP_06748489.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 119 1 119 119 134 100.0 1e-30 MLLEEKLILFRNELKNKTIYNYKLSGIVLELLFSKKVFPKNIEIKKFVEEIFNLKLKDYI FKSRNSVGIKISKLIIQNDEKKNSVYKKNLSVFINEKIEKLKKSKKIKEEKNNFDGWIK >gi|292606569|gb|ADGG01000041.1| GENE 91 82965 - 83726 1035 253 aa, chain - ## HITS:1 COG:DR2040 KEGG:ns NR:ns ## COG: DR2040 COG1192 # Protein_GI_number: 15807034 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Deinococcus radiodurans # 1 220 17 248 331 105 31.0 8e-23 MADIISFINMKGGVGKTTLSIGIADYLSSIGKKVLLIDADPQFNATQALLDTYKVVNYKE DTKNYYTEEILPNSKTVYRLFMRTEELLENLEENSYQGDIIVNLKENLDIVCGDLRLVLI NNSGDYKNVKKFKKFIDINNLREKYDFILFDCPPTLTIYTDGALLVSDYYLIPNRIDRYS IVGIDSLQKAIKDLIIEEEIHLKCLGLIYTMVKKDMAQKQNKIRIDFENKKVVKEIDIFS STLSVVDHIQWGT >gi|292606569|gb|ADGG01000041.1| GENE 92 83976 - 84614 705 212 aa, chain + ## HITS:1 COG:no KEGG:FN1272 NR:ns ## KEGG: FN1272 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: F.nucleatum # Pathway: not_defined # 1 211 1 211 211 225 71.0 7e-58 MSFDNDKKLLILEKAKDMIITEGYSNLSINKLTSELGISKGSFYTYFPSKDNMLAEILDE YSENAKVFSENLASNSNNIDECLNYYVNSMLNLNDRNLKLELVMTSLKRNYEVFNEENFI KLKNTARKTINFIKSILKKYKKSINIKEKDMEKCSKMIFSITEVFLMMENINFETNKFSS KTLDEVKELYRSQDMKENLEFIKESIKKILYR >gi|292606569|gb|ADGG01000041.1| GENE 93 84633 - 85910 1549 425 aa, chain + ## HITS:1 COG:FN1273 KEGG:ns NR:ns ## COG: FN1273 COG1538 # Protein_GI_number: 19704608 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Fusobacterium nucleatum # 11 425 1 413 413 581 78.0 1e-165 MKKLLTFFVLLANVALARDLTLDQAIDLSLNNSKEMKISEKSLEISKLNVSKAFKEALPS VTYSGAVTLGEHERNILTQSGGNYVSKKKGYTQTLKVTQPLFTGGAISAGIKGAKAYENI ASYSYLQSKIQNRLDTIKIYSDIINAERNLAALKSSEEILLKRHYKQEEQLKLRLITKPD ILQTEYSLEDIRAQIINLQNLADTNKEKLYIRTGINKSEPLNLVSFDIPNNLSDSLNLNT DLNQALNQSLSAKIADEQVNIAAATRMAAAGDLLPQVSAYVSYGTGGQERASFSRSYKDA EWIGGVQVSWKVFSFGKDLDNYKVSKLEEEQQVLKNTSAKENIEINVKSAYLNVVSLEKQ VAAQKKAVEAAKSNFEMNQEKYDAGLISTIDYLDFENTYRQARIAYNKVLLDYYYAFETY RSLLI >gi|292606569|gb|ADGG01000041.1| GENE 94 85928 - 87028 1511 366 aa, chain + ## HITS:1 COG:FN1274 KEGG:ns NR:ns ## COG: FN1274 COG0845 # Protein_GI_number: 19704609 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 1 365 1 368 370 551 87.0 1e-157 MKKLLTILLATSLLVVACGKDKEAKDAKNEAAVTETQVAAKPVEVAAVTTRQMSKLFESS AVWEPLAKVDFSTNKGATVEKIYKRNGEYVNKGEIIVKLSDAQTEADFLQAKANYQSATA NYNIARNNYQKFKTLYDKQLISYLEFSNYEATFTSAQGNLEVAKAAYMNAQNSYSKLVAK ADISGIVGNLFIKEGNDIAAKETLFTILNDKQMQSYVGITPEAISKVKLGDEIDVKIDAL RKEYKAKITELNPIADSTTKNFKVKLTLDNSDGEIKDGMFGNVVIPVGESSVLSVEDEAI VTRDLINYVFKYEDGKAKQVEVTLGATNLPYTEISSPEIKEGDKIIVKGLFGLQNNDSVE IKNEVK >gi|292606569|gb|ADGG01000041.1| GENE 95 87031 - 90093 4065 1020 aa, chain + ## HITS:1 COG:FN1275 KEGG:ns NR:ns ## COG: FN1275 COG0841 # Protein_GI_number: 19704610 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 1020 1 1020 1020 1684 90.0 0 MSLAGISIRRPVATTMVMLSFIFIGLLAMFSMKKELIPDIKVPVVTISTTWSGAVSEDVE AQVTKKIKDSLSNVDAIDKIQTVSAYSSSTVVVNFDYGVDTDEKVTQIQREVSKITNSLP SDANTPLIRKVEAASGNMTAVIAFNADSKTALTTFIKEQLKPRLESLPGVGQVDIFGNPD KQLQIQVDSDKLASYNLSPMELYSIVRTSVATYPIGKLSTGNKDMIIRFMGDLDYIDQYK NILISSNGNTLRLKDVADVVLTTEDADNVGYLNGKEAIVVLLQKSSDGDTITLNNAAFKA IEEMKPYMPAGTEYSIEMDASENINSSISNVSSSAVQGLVLATIILFAFLKSFRTTVLIS VALPVAIVFTFAFLSMRGTTLNLISLMGLSIGVGMLTDNSVVVVDNIYRHITELNSPVRE AAENGTEEVTFSVIASALTTIVVFLPILFIPGLAREFFRDMSYAIIFSNLAAIIVAITMI PMLASRFLNRKSMKSEDGKLFKKVKGFYLKIINKAISHKGLTVLIMVGLFFFSILVGPKL LKFEFMPKQDQGKYSLTAELQKGTDLAKAERIAKELEEIVKNDPHTESYLMLVSTSSISI NANVGKKNTRKDSVFTIMDDIRKKASNVLDARVSMTNQFSGGQTQKDVEFLLQGSNQDEI KKFGKQLLEKLQNYDGMVDISSTLDPGIIELRLNIDRDKIASYGISPTVIAQTVSYYMLG GDKANTATLKTDSEEIDVLVRLPKEKRNDINTLSSLNIKVGDNKFVKLSDVATLQYAEGT SEVRKKNGIYTVTISGNDGGVGLGKIQSKIIEEFNNLEPPSTISYSWGGQSENMQKTMSQ LSFALSISIFLIYALLAAQFESFLLPFIIIGSIPLALIGVIWGLVVLRQPIDIMVMIGVI LLAGVVVNNAIVLIDFIKTMRTRGYDKEYAIIYSCEIRLRPILMTTMTTVFGMIPMALGL GEGSEFYRGMAITVIFGLAFSTILTLVLIPILYSVVDSFTTKMAAKLKGVFGGLKKKGAK >gi|292606569|gb|ADGG01000041.1| GENE 96 90093 - 90506 504 137 aa, chain + ## HITS:1 COG:no KEGG:FN1276 NR:ns ## KEGG: FN1276 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 137 1 131 131 221 90.0 8e-57 MNKIRNMNDTESENLKFVVLHINDTQVRLLEKFFEKIGIYYYTVENNVKRAIDKSIKHQQ TKVWPGSDALVTLPLGDQKIDEFLIKLKTFRMVLPKGLFLSVGIIPFERVIRSMYEEDIP VDEELMEELQNDKDYNI >gi|292606569|gb|ADGG01000041.1| GENE 97 90615 - 91142 505 175 aa, chain + ## HITS:1 COG:SMb20398 KEGG:ns NR:ns ## COG: SMb20398 COG4186 # Protein_GI_number: 16264132 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Sinorhizobium meliloti # 1 169 1 159 164 120 39.0 1e-27 MIYFTADIHFYHENIINHTKRPFKNADEMNRKIIDNWNNIVKANDEVYILGDVTMKGASN ANTVLSQLKGKKYLIKGNHDHFVEEKNFCSYIFEWVKDYYELEYEGNFFVLFHYPLEEWN KFYRGAYHLHGHQHNNSLYNFKNLKKGLRRYDVGVDANNFKPVSIDEIIKFFEML >gi|292606569|gb|ADGG01000041.1| GENE 98 91268 - 92227 1539 319 aa, chain + ## HITS:1 COG:FN0662 KEGG:ns NR:ns ## COG: FN0662 COG0010 # Protein_GI_number: 19703997 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Fusobacterium nucleatum # 4 318 3 317 318 591 90.0 1e-169 MEYWSGRVDGNDSDILRIHQVIQVKTLDELMQDEYNGKKVCFVSYNSNEGIRRNNGRLGA ADGWKHLKSALSNFPIFDTDIKFYDLKDPIDVVDGKLEEAQMKLADVVAKLKSKDYFVVC MGGGHDIAYGTYNGILSYAKTKTKDPKIGIISFDAHFDMREYAKGANSGTMFYQIADDCQ KNNIKFDYTVIGIQRFSNTKRLFERAQKFGVTYYLAEDILKLSDLNITPILERNDYIHLT ICTDVFHITCAPGVSAPQTFGIWPNQAIGLLNYIAKTKKNLTLEVAEISPRYDYDDRTSR LIANLIYQAILTHFGCEIK >gi|292606569|gb|ADGG01000041.1| GENE 99 92361 - 93224 596 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 284 1 284 290 234 41 3e-60 MIYLLIAAFLWGTSFIAGKIAYDMLDPSLVVAIRYILASIILLPMTFSFMKKKEESFTKK DFILLVILGILTYPLTSMLQFIGLSFTSASSATTIIGIEAVMITIVGFIFFKEKASPIVF LLGIIAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVRLSKKILTKMNSNYYTALT IQLGTLFALPIMLFLVKSWEIHYSLKGIIALLYLVVGCSIGAGWFWNKGLERSEASKSGV FLALEPVFGILLAVLVLGEKLNFLSIIGIILVILSAAICMILPKQES >gi|292606569|gb|ADGG01000041.1| GENE 100 93619 - 95253 2551 544 aa, chain - ## HITS:1 COG:FN2082 KEGG:ns NR:ns ## COG: FN2082 COG2759 # Protein_GI_number: 19705372 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Fusobacterium nucleatum # 1 544 1 544 544 1005 96.0 0 MTDIQIAQAAKKENIVEIAKRLGLTEDDIEQYGKYKAKINLDVLQKTNRPNGKLILVTAI TPTPAGEGKSTVTIGLTQALNKIGKLSAAAIREPSLGPVFGMKGGAAGGGYAQVVPMEDI NLHFTGDMHAIGIAHNLISACIDNHINSGNALGIDITKITWKRVVDMNDRALRNIVIGLG GKANGYPRQDSFQITVGSEIMAILCLSNSITELKEKIKNIVFGTSLEGKLLRVGDLHIEG AVAALLKDAIKPNLVQTLENTPVFIHGGPFANIAHGCNSILATKMALKLTDYVVTEAGFA ADLGAEKFIDIKCRLGGLKPDCAVIVATVRALEHHGKGDLKAGLENLDKHIDNIKNKYKL PLVVAINKFVTDTDEQIDMIEKFCNERGAEVSLCEVWAKGGEGGIDLAEKVLKAIDNNKV EFDYFYDINLTIKEKIEKICKEIYGADGVIFAPATKKVFDTIAAEGLENLPVCMSKTQKS ISDNPALLGKPSGFKVTINDLRLAVGAGFVIAMAGDIIDMPGLPKKPSAEVIDIDENGVI SGLF >gi|292606569|gb|ADGG01000041.1| GENE 101 95413 - 96003 698 196 aa, chain - ## HITS:1 COG:no KEGG:FN2083 NR:ns ## KEGG: FN2083 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 196 1 196 196 307 83.0 1e-82 MEAKINNIDLFKVKDNENTYYGFSQEWYKDEWQRRAGCGATVASSIINYYNQRNNFKKVG ISDALKIMEELWNYLLPTEQGLNSIKLFYDGIKSYYEDKEVTIDYINVDIKNKVSLEEVI KFICKELNEDRPLAFLNLCNGEENNLDKWHWVVVVEMFEENGEHFLNIIDDKEIIKINLS LWYRTIKNDGGFITFK >gi|292606569|gb|ADGG01000041.1| GENE 102 96303 - 97016 729 237 aa, chain + ## HITS:1 COG:FN2084 KEGG:ns NR:ns ## COG: FN2084 COG3619 # Protein_GI_number: 19705374 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 236 1 236 239 362 85.0 1e-100 MNKKKLHKFFNNKEEFAPNERLWLFCMLMLVAGFFGGFTFSLRGRVFVNAQTGNLVLLSL GFATWDTALIKNALATFLAYFCGIITAELISKKINKTSFLIWERILLIFSIIVTICLGFI PETAPYEFTNFPIAFTAAMQFNTFEKAHGMGMATPFCTNHVKQASANLVRFLRTRDNNKL RISLSHLSMILSFIIGATLSIFLGRFLFGKAIWLSTIFLIITFYFFSKSIKEYKKKL >gi|292606569|gb|ADGG01000041.1| GENE 103 97035 - 97565 1026 176 aa, chain - ## HITS:1 COG:FN2067 KEGG:ns NR:ns ## COG: FN2067 COG0526 # Protein_GI_number: 19705357 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 14 176 1 163 164 257 79.0 6e-69 MKRKLIMVLMFALMSFSLFAAKSNKNEDVKVPNIVLQDQYGKKHNLADYKGKVVVINFWA TWCGYCVREMPDFEKVYKEFGSNSKDVIIIGIAGPKSKLNANNVDVSKEEITAFLKKKNI TYPTLMDETGKTFDDYGVRAFPTTYVINKKGFLEGYVSGAITADQLKKAINETLKK >gi|292606569|gb|ADGG01000041.1| GENE 104 97648 - 99006 682 452 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 [Haemophilus influenzae 3655] # 3 452 2 445 456 267 33 4e-70 MESIYKIVDAVNGLLWGKNILVFMLIGAALYFSFKTKFMQFRLFHKIVKVLFKNEKGKKG GISSLETFFLGTACRVGAGNIAGVVAAISVGGPGAIFWMWLVAMLGSATAFIESSLAVIY RKKEKDGSYTGGTPFIIEKRLNMRWLGIIYALASVVCYFGVTQVMSNSITSSITSVYTWG AENKFLNLQNISSIAVAVMVAYVIFFSSSKKDSIIESLNKIVPFMAIIYVVAVIYILVTN LTNIPSMIGTIFSQAFGGKEIFGGTFGAVVMNGVRRGLFSNEAGSGNSNYAAAAVHIDNP SKQGMVQAFGVFIDTLIICSATAFIVLLVPESTIAGLSGMGLFQAAMTYHLSSIGAPFVV ILMFFFCVSTILAVAFYGRSAVNFIHESKYLNIGYQAILILMIYIGGIKQDMFIWSLADF GLGIMTVINILVIIPIAKPALDALKNYEKELK >gi|292606569|gb|ADGG01000041.1| GENE 105 99119 - 100672 2081 517 aa, chain - ## HITS:1 COG:FN2070 KEGG:ns NR:ns ## COG: FN2070 COG1492 # Protein_GI_number: 19705360 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Fusobacterium nucleatum # 25 514 1 490 491 800 87.0 0 MGEMINCQENLCYNKNKQISFGGRMKKHKNIMIQGTGSSVGKTLMVAGLCRIFAQDGYRT TPFKSQNMALNSFVDIEGLEMSRGTVIQAEAAYEIPRAFMNPILLKPNSDNNSQVIINGK VAYTVDAKTYFSNSKDLKKIALDSYKNNIEANFDIAVLEGGGSPAEINLREYDLVNMGMA ELVDAPVILVGNIDIGGVFASIYGTVMLLDEQDRKRIKGYIINKFRGDSDLLKPAIEILD KKLKDEGLDIKFLGVLPYADLRIEEEDSLSDEDKRVYSDNKEYIDISVIKTKKMSNFTDF HAFKQYDDVRLKYVYDAKDLGNEDIIIFPGSKNTITDLEDLKERGIFEKVKELKEKGKII VGICGGLQMLGKKIYDPKHLESDILETEGFNFFDYETAFDEIKKTEQVTKRLELTEGILK DFNNYEVKGYEIHQGISTFDSPVICKNRVFATYIHGIFDNSKFTNDFLNIVRKEKSMPEQ KEVFSFNEFKEKEYDKLADLLRKNLDMVEIYKILEKK >gi|292606569|gb|ADGG01000041.1| GENE 106 100715 - 101782 1529 355 aa, chain + ## HITS:1 COG:FN2072 KEGG:ns NR:ns ## COG: FN2072 COG2252 # Protein_GI_number: 19705362 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 1 355 1 355 355 487 93.0 1e-137 MTLSDVLAALGVVLNGIPQALLAATYGFASVPTAFGFVVGAVACLLYGSAIPISFQAETI ALAGMLGKDIRERLSIILFSGITMVILGLTGTLSIIVDFAGSTIINAMMAGVGIMLARIA LSGLKESRIVTASSIASAFITYFFFGQNLVYTIVVCVIFSSLVANIFKIDFGGGIVENYK KIEIKKPILNFNVIRGSLALACLTIGANIAFGNITASMTGKYEANIDHLTIYSGLADAVS SLFGGGPVEAIISATAAAPNPLNSGVLMMVIMAVILFFGLLPKISKYIPGHSVHGFLFIL GAIVTVPTNASLAFSGGTPQDYVVAATAMTVTAANDPFIGLLVALVVKYIFVFIG >gi|292606569|gb|ADGG01000041.1| GENE 107 101794 - 102327 737 177 aa, chain + ## HITS:1 COG:FN2073 KEGG:ns NR:ns ## COG: FN2073 COG0503 # Protein_GI_number: 19705363 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 1 177 1 177 177 263 85.0 1e-70 MKTYTLNIAGLKRELPIIKLSYDLSIASFVILGDTEIVRKTAPMIAKKLPDVDFIITAEA KGIPLAYEISRVLNLNEYIVARKSIKAYMEAPIEVDVDSITTNGSQKLYLNSIDAQKIKG KRVALVDDVISTGQSLKALETLVKKAGANVVAKAAILAEGEAKDRKDIIFLEALPVF >gi|292606569|gb|ADGG01000041.1| GENE 108 102645 - 103223 559 192 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783182|ref|ZP_06748506.1| ## NR: gi|294783182|ref|ZP_06748506.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 192 1 192 192 317 100.0 2e-85 MAIKVRLEKEGQLKNAFVGFSWTIFFFGFWVPLLRGKLKDFAYFFMFFLCKIIIFAVLAK EMFDIVYIGVEESKFEISYYIIVPFILMTALYPIDVFLAYTYNKYSITNMFKEGFYLIEN DEYSAAVLKDYTYLPYTEEEFADEELLKRYEQHVKKARKSEKNKCVVAIIIMASYQVFLG VVSSVPTIFSFF >gi|292606569|gb|ADGG01000041.1| GENE 109 103233 - 103799 520 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783183|ref|ZP_06748507.1| ## NR: gi|294783183|ref|ZP_06748507.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 188 1 188 188 323 100.0 2e-87 MAVKVKLEKDGFKKDAYVGFSWTTFFFGFWVPSFRLDLKGFLVFLGIMLFQTATILFVIL NALKTGEFYILTIFIFSYIGINYIISFLLAIYYNKIYTKNMLLDGWKPMDNDEYSLAILG SYGYIEYEIDSQDEEKIARCKGYVAEVKNEERRKWLIFLIPIFMTVLSIVVSIIGLIALI KVLSKVGY >gi|292606569|gb|ADGG01000041.1| GENE 110 103828 - 104637 833 269 aa, chain - ## HITS:1 COG:FN0185 KEGG:ns NR:ns ## COG: FN0185 COG3593 # Protein_GI_number: 19703530 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Fusobacterium nucleatum # 1 269 129 397 400 432 84.0 1e-121 MSFGFYRHLFIELLNEIIEKEKDHNFWNNTILLWEEPEFYLNPQQERACYEALSESTKLG LMSVVSTNSSRFIEIENYQSLCIFRRVKEEIEIYQYSGNLFSGDEVTVFNMNYWINPDRS ELFFAKKVILVEGQTDKIVLSYLAKHLGVFKYEYSIIECGSKSSIPQFIRLLNAFHIPYV AVYDKDNHYWRNETELMNSTLKNKTIQKLISKNLGTWIEFENDIEEEIYNESRDKKNYKN KPFYALETVIKSGYVLPEKLKEKIIKIFE >gi|292606569|gb|ADGG01000041.1| GENE 111 104897 - 105136 161 79 aa, chain - ## HITS:1 COG:FN0185 KEGG:ns NR:ns ## COG: FN0185 COG3593 # Protein_GI_number: 19703530 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Fusobacterium nucleatum # 39 73 1 35 400 64 88.0 4e-11 MELLKIQIKNWQTFSNISLECKEFLVFIGESSTGKSSFMKALLYFFQARNLHKGDIKNPE LPLEIIGTLKGEKRACISA >gi|292606569|gb|ADGG01000041.1| GENE 112 106112 - 106612 374 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783185|ref|ZP_06748509.1| ## NR: gi|294783185|ref|ZP_06748509.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 166 1 166 166 251 100.0 1e-65 MKTVTKKEDFTCIVYDEELKRKCDIVLSLHTILWILIPMYILLFRANDKIYNYLWIIFYV FFIISYRLEPYLSKIKIILYEDKIEIKKRKKTRLFLYSEIKEIKYNKKYISKVGEISFIK IMKKNGKIYEAMRGQLEKEIIEIFTIIKNSYEEWRIKNDESYNKEN >gi|292606569|gb|ADGG01000041.1| GENE 113 106584 - 107462 914 292 aa, chain + ## HITS:1 COG:no KEGG:FN0289 NR:ns ## KEGG: FN0289 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 162 292 176 308 308 164 76.0 5e-39 MMKVITKKINNTDEYSITRYSISGIILKTIIFLILYIICAYLGIYHLEEISLSKIIKFVI GSFPFFMFFYLEAILGSSKEVLCIKENNLILKKYILFFCYYSKILKVEDIRKIYYEKVVF KGFPILFFPTDLLKNIKFRVKENEFEDKIYAFGYKLSEHESTEIIEEIEEHIKVENVEKE NLSEKYNYSLNERYSYILNKILDEEKLFISEKDNNFIINGDSEAIKDLEISKDMNFEEID FYVFYVNYLSKKEFENKKVLVGYNGTDGKEVTMSKFKEDINEIRDSRSTFKN >gi|292606569|gb|ADGG01000041.1| GENE 114 107821 - 108531 866 236 aa, chain + ## HITS:1 COG:FN0802 KEGG:ns NR:ns ## COG: FN0802 COG0765 # Protein_GI_number: 19704137 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 1 236 1 236 236 366 94.0 1e-101 MEYLEILKDTFLTDDRYMYIVDGVIFSIGITLFSAILGIVLGLLLAVMKLSHWYPFKRIK FLENFNPLSKIAYIYIDVIRGTPVVVQLMILANLIFVGALRETPILVIGGIAFGLNSGAY VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSI IGFIGGIDLLRSASIITSQTYRGVEPLLAVGFIYLILTSIFTVFMRKVERGLKVSD >gi|292606569|gb|ADGG01000041.1| GENE 115 108524 - 109252 605 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 237 49 3e-61 MINITNLHKNFGDLEVLKNISTEIKKGEIISIIGPSGSGKSTFLRCINKLEEPSSGHIYI DGMDLMDKNTDINKVRERVGMVFQHFNLFPNMTVLDNLTLSPIMVKKESKEEAEKYALSL LEKVGLSDKANSYPTQLSGGQKQRIAIARALAMKPEVILFDEPTSALDPEMIKEVLDVMR DLAKEGMTMLIVTHEMGFARNVGNRILFMDKGEIIEDCSPKEFFENPTNERIKDFLNKVL NK >gi|292606569|gb|ADGG01000041.1| GENE 116 109281 - 110009 1066 242 aa, chain + ## HITS:1 COG:FN0800 KEGG:ns NR:ns ## COG: FN0800 COG0834 # Protein_GI_number: 19704135 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Fusobacterium nucleatum # 13 242 1 230 230 361 89.0 1e-100 MKKIFKLILMSLLSVVISVSAFAKNKVVYVGTNAEFAPFEYLEKNKVVGFDIDLLDAISK ETGLEFKVQDMAFDGLLPALQTKKVDMVIAGMSATPERKKAVAFSKPYFKAKQVVITKGV DKSLKSFKDLSGKKVGVMLGFTGDTVVSEIKGVKVERFSASYAAIMALSQNKVDAVVLDS EPAKKYTANNKQFVIASIPAEEEDYAIAVRKNDKELLDKINAALDKIKANGEYDKLLKKY FK >gi|292606569|gb|ADGG01000041.1| GENE 117 110082 - 110549 524 155 aa, chain + ## HITS:1 COG:no KEGG:FN1264 NR:ns ## KEGG: FN1264 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 35 155 1 120 120 170 71.0 2e-41 MKKVGSFFTLLTSKGYKKVVLIPLAFCLGFFLYSLYSNFTGGKAEKTTYDDGTTRISAQS DLGSVKLPKILDGLNIPIHDELKIRNYDVFLDKDENITSIDIYCKSNKDANEIIDWYKEK LNATDDRTKGEWNGFDMDVSYSEGSKLFSISLKKQ >gi|292606569|gb|ADGG01000041.1| GENE 118 110527 - 110757 180 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262068246|ref|ZP_06027858.1| ## NR: gi|262068246|ref|ZP_06027858.1| riboflavin synthase alpha chain [Fusobacterium periodonticum ATCC 33693] # 1 65 13 77 79 87 86.0 2e-16 MEILDKKSNRMSRANAGVFECNEFPDLQRILDFLSLRNLLSNELFFTFCEFTTASYFFTF NIFSFYIFLFIVFLDL >gi|292606569|gb|ADGG01000041.1| GENE 119 110988 - 112322 1919 444 aa, chain - ## HITS:1 COG:FN1944 KEGG:ns NR:ns ## COG: FN1944 COG0733 # Protein_GI_number: 19705249 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 1 444 16 459 459 716 89.0 0 MSEVEKRDGFSTKWGFILACIGSAVGMGNIWRFPVLVSAMGGMTFLIPYFIFVIFIGSTG VIEEFALGRSAGAGPVGAFGMCTEMRGNRSIGEKIGIIPILGSLALAIGYSCVMGWVFKY AWMSIDGSMYAMESNMDVIGSTFGQTASAWGANFWIVVALIVSFIIMSMGIASGIEKANK IMMPVLFILFVLLGIYIVFQPGSSSGYKYIFTVNLKGLVDPKVWIFAFGQAFFSLSVAGN GSVIYGSYLSKKEDIPNSAKNVAFFDTLAALLAAFVIIPAMAVGGAELSSGGPGLMFIYL INIMNNMAGGRIIEVIFYLCVLFAGVSSIINLYEAPVAFLQEKFKIKRIPATAIIHILGC AVAICIQGIVSQWMDVVSIYICPLGALLAAVMFFWIGGKKFAEESVNMGANKPIGSWFYP AGKYVYCLLALVALIAGALLGGIG >gi|292606569|gb|ADGG01000041.1| GENE 120 112435 - 114168 2639 577 aa, chain - ## HITS:1 COG:FN1943 KEGG:ns NR:ns ## COG: FN1943 COG3033 # Protein_GI_number: 19705248 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Fusobacterium nucleatum # 33 577 1 545 545 1108 96.0 0 MIIFSIFFSIKECCPLIKKNDNRGTKIFRRSTMKEYLLDVPVPRSFSYVKRNIPEVTLEQ RERALKATHYNEFAFPAGMLTVDMLSDSGTTAMTDQQWSAMFLGDESYGRNKGYYVLLDT MRDCFERGDNQKKIINLVRTDCQDIEKMMNEMYLCEYEGGLFNGGAAQLERPNAFLMPQG RAAESILFEIVRKVLAAREPGKVFTIPSNGHFDTTEGNIKQMGSVPRNLYNKELLYEVPE GGRYEKNPFKGDMDIKKLEKLIEVVGVENIPMIYTTITNNTVCGQAVSMKSIRETSKIAH KYEIPFMLDAARWAENCYFIKMNEEGYRDKSIAEIAKEMFSYCDGFTASLKKDGHANMGG ILAFRDKGYFWKKFSEFNEDGTVKTDVGILLKVKQISSYGNDSYGSMSGRDIMALAAGLY ECCNFNYLHERVEQCNYLAEGFYKAGVKGVVLPAGGHGVYINMDEFFDGKRGHESFAGEG FSIELIRRYGIRVSELGDYSMEYDLKTPEQQAEVANVVRFAINRSVYSQEHLDYVIAAVK ALYEDRESIPNMRIVSGHNLPMRHFHAFLEPYPNEEK >gi|292606569|gb|ADGG01000041.1| GENE 121 114311 - 115003 727 230 aa, chain + ## HITS:1 COG:FN1942 KEGG:ns NR:ns ## COG: FN1942 COG2964 # Protein_GI_number: 19705247 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 228 1 228 229 308 71.0 5e-84 MKNEILNQYKLLVNFLGKSLGPSYEIVLHEIKGEEVKMIAIANGEISDRVLEDTISSETL NILKNKSSNNEENMVNNTVLLKNGKKIRSSSMLIKENQKVVGMLCVNFDDSKFHELNCQL LRIIHPDMFVKNYLSDVSYNVLYDDFKKEADEDNEDEDIDAYMKKVYYEVNTKLNFPIGR PTRQEREKTIYALYERGFFNLKDSIDFVSKKLFCSTSTVYRYIALAEKNK >gi|292606569|gb|ADGG01000041.1| GENE 122 115071 - 116381 1441 436 aa, chain - ## HITS:1 COG:FN0340 KEGG:ns NR:ns ## COG: FN0340 COG3314 # Protein_GI_number: 19703683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 436 1 436 436 725 93.0 0 MENKKYPSSVVVKFLVCSLVGIFLFFVPISFNGKSTIPLDHIVNLVLKIPYFKEAYGTLV ILVGVFLPFYKKTWNKNTTSIVFSLLKILALPFLFMVLFNKGPEFLMNKDVIPFIWNKIV IPVTTIVPVGSIFLSLIISYGLMEFVGVFMRPVMKPIWKTPGRSAIDAVASFVGSYSLAL LITNRVYKEGKYTSKEAVIIATGFSTVSATFMVIVAKTLDLMDSWNLYFWLTVIVTFVVT AITARIYPIRNKSNAYFENQEGDVEKDIPKDKFKVAFNEGMEVCANSGSILDNVIINLKD GIMLAFNIGPSLMAVGTLGIVLANHTPIFDWIGYLVYPFTLISGFEEPLLTAKALALGIA EMFLPAILVTKLSFEVKMLVAITCVSEVLFFSASIPCMMATDIPISFKDYLIIWFERVVL SILVAVPLIYLVKIIM >gi|292606569|gb|ADGG01000041.1| GENE 123 116536 - 117837 1836 433 aa, chain - ## HITS:1 COG:FN0341 KEGG:ns NR:ns ## COG: FN0341 COG2056 # Protein_GI_number: 19703684 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 1 433 1 442 442 501 73.0 1e-141 MIFLNPVVLSVIVMSVLCLLKLNVLLALIVSALVAGLVAGMPIGDIMNTLIGGMGGQSET ALSYILLGTLAVAIGNTGVASIISRKVASVINGKKLVILIIIAFFGSFSQNLIPVHIAYI PILIPPLISVMNKLKLDRRAMACSLTFSLKAPYIAIPAGFGLIFQGIIATQMTENGMPVD KLDVWKSTWILGAAMVIGLLIAMFFSYRKNREYQDLPLKGIEIQEAEKMETKHWLTLLAA LAAFVVPVLYGSLPLGALAALVLMFVFGVLKWKDIDKTIGGGMQLMGLIAFIMLVASGYA AVIKQTGAVEELVNSIYGMIGGSKAIGVLLMLLVGLLVTMGIGTSFGTIPVVAAIYIPLC LKLGLSVPGSVVILAAAAALGDAGSPASDSTLGPTSGLNVDGQHDHIWDTCVPTFLHFNI PLIIAGFIGGMLF >gi|292606569|gb|ADGG01000041.1| GENE 124 117885 - 118388 713 167 aa, chain - ## HITS:1 COG:FN0342 KEGG:ns NR:ns ## COG: FN0342 COG0652 # Protein_GI_number: 19703685 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Fusobacterium nucleatum # 1 167 1 167 167 280 91.0 1e-75 MSLQAIIKTNKGEINLNLFSDVAPVTVLNFVTLAKSGYYNGLKFHRVIEDFMIQGGDPTG TGAGGPGYQFGDEFKRGVEFTKKGLLAMANAGPNTNGSQFFITHVPTEWLNYKHTIFGEV VSPKDQDVVDSIKQGDTMNEIVVVGDVDKLIEENKEFYTQLKNFLKI >gi|292606569|gb|ADGG01000041.1| GENE 125 118439 - 119098 632 219 aa, chain - ## HITS:1 COG:no KEGG:FN0343 NR:ns ## KEGG: FN0343 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 219 6 224 224 231 76.0 1e-59 MDIETKIKNFIDYAREVCLQSLLLADNIKVDLKSQDNLYEVERIDNEVISKYENIYLLLD ETTLLDIYKKDEKVFEKIEEAIKKMAEDNKIKDEYIKLQIKKRKELKGNSGSEVVERFFK YKIKELKKIKGDLIQKINKVLDKEEKLNLDLSNAIQEVEQMEIIEKLQPVRAEFRSLSLQ FDKYQKELEETENKLSKKWYYEIYGTTDKEILLEAYNTK >gi|292606569|gb|ADGG01000041.1| GENE 126 119082 - 120221 1439 379 aa, chain - ## HITS:1 COG:FN0344 KEGG:ns NR:ns ## COG: FN0344 COG0116 # Protein_GI_number: 19703687 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Fusobacterium nucleatum # 1 379 1 379 379 659 90.0 0 MIFIASATMGLESVVKEECLALGFKNIKVFDGRVEFEGDFKDLVKANIYLRCSDRVFIKM AEFKALSYEELFQNVKSIEWQDFIDENGEFPISWVSSVKSKLYSKSDIQRISKKAIVEKL KEKYKREIFLENGALYSIKIQCHKDIFIVMLDSSGEALTKRGYRAVKRLAPIKETLAAAL VYLSKWKSDEVLLDAMCGTGTIAIEAAMIARNIAPGANRNFAAEKWSVIDEKLWTDIRDE AFSNEDLSKELKIYASDIDEKSIEVAKENAEKAGVEEDIIFEVKDFKDIESPAKYGAVIV NPPYGERLMNDEDIEELYRDFGKFCKKNLTKWSYYIITSYEDFEKAFGRSATKNRKLYNG GIKCYYYQYFGDRKNGYRN >gi|292606569|gb|ADGG01000041.1| GENE 127 120218 - 121312 1140 364 aa, chain - ## HITS:1 COG:FN0345 KEGG:ns NR:ns ## COG: FN0345 COG0628 # Protein_GI_number: 19703688 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 35 363 3 331 331 390 78.0 1e-108 MNLKNIMKITGIILIFVILQSYFTNPESFSTIIGRWTGYFMTLIMAIFIAILLEPIEKYL KKKSKINDVLAISLSIVFVVLIVIIMSLIVIPEIISSLKVLNDMYPAISEKVLTIGKDVT NYLAEKNIYTVDTQELNDSFTNFISNNTSNIKEFVFAFVGGLVNWTLGFTNLIIAFTLAF LILLDKKNLMKTLENLIKIIFGVKNTPYVMNKLKLSKDIFISYVSGKIIVSFIVGLCVYI ILLITGTPYAALSAILLGVGNMIPYVGSIFGGIVAFFLILLVAPIKTLILLIAIIISQLV DGFIVGPKIIGNKVGLSTFWVMVSMIIFGNLFGIVGMFLGTPILSIIKLFYVDLLKRAEQ GGKE >gi|292606569|gb|ADGG01000041.1| GENE 128 121334 - 121726 354 130 aa, chain - ## HITS:1 COG:FN0346 KEGG:ns NR:ns ## COG: FN0346 COG5341 # Protein_GI_number: 19703689 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 130 1 130 130 228 95.0 1e-60 MKKTKYFKIGDLVIYGFLIIFFSILTLKIGSFKDVKGAKAEIWVDGELKYVYPLQEEEKN IFVDTNLGGCNVQFKDNMVRVTTSNSPLKIAVKQGFIKSPGEVIIGIPDRLVVKVVGDSE DDSELDFVAR >gi|292606569|gb|ADGG01000041.1| GENE 129 121713 - 122687 1113 324 aa, chain - ## HITS:1 COG:FN0347 KEGG:ns NR:ns ## COG: FN0347 COG0688 # Protein_GI_number: 19703690 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Fusobacterium nucleatum # 25 324 1 300 300 486 88.0 1e-137 MSKKKILIFLLILFFIIMYSKESTMKFEQIKYIERKTGEIKTEKVMGEGALKFLYYNPFG KLALNAVVKRKFISDWYGSKMSKPESKEKIKGFVEEMGIDMSEYKRSIDEYTSFNDFFYR ELKEGARDIDYDEKAIVSPADGKILAYQNIKEVDKFFVKGSEFTLEEFFNDKDLAKKYED GTFVIIRLAPADYHRFHFPTDGEISEVKKISGDYYSVSTHAIKTNFRIFCENKREYAILK TKNFGDIAMFDVGATMVGGIVQTYKANSLVKKADEKGYFLFGGSTCILVFEKGKVEIDKD ILENTQNKIETRIYMGEKFGNEKN >gi|292606569|gb|ADGG01000041.1| GENE 130 122680 - 124185 1895 501 aa, chain - ## HITS:1 COG:FN0348 KEGG:ns NR:ns ## COG: FN0348 COG1488 # Protein_GI_number: 19703691 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 501 1 501 501 896 90.0 0 MNNDIILTEFARVINSDRYQYTESDIFLMENMQNKIAVFDMFFRKTEDGGFAVVSGIQEV IHLIEVLNTTSEEEKRKYFSKVLEEEHLVDFLSKMKFTGDLYAIQDGEIVYPNEPIITIK APLIQAKILETPILNIMNMNLGIATKASMVTRAADPVKVLAFGSRRAHGFDSAVQGNKAA VIGGCFGHSNLITEYKYGIPSNGTMSHSYIQAFGVGAEAEKEAFVTFIKHRRQRKRNSLI LLIDTYDTIHIGIENAIKAFKECGIDDNYEGIYGVRLDSGDLAYQSKKCRKRFDEEGFTK AKITLTNSLDEQLIRSLREQGACVDMYGVGDAIAVSKSYPCFGGVYKIVELDEEPLIKIS GDVIKISNPGFKEVYRIFDKDGYAYADLISLVKNDKDKEKLLNNEDFTIRDEKYDFKSSL IEKDKYTYTKLTKQYIKDGKIDKDLYDELFDIMKSQKHYFDSLAKVSVERKRLENPHSYK VDLSSDLIELKYGLINKIKNV >gi|292606569|gb|ADGG01000041.1| GENE 131 124307 - 124762 734 151 aa, chain + ## HITS:1 COG:FN0349 KEGG:ns NR:ns ## COG: FN0349 COG1490 # Protein_GI_number: 19703692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Fusobacterium nucleatum # 1 151 4 154 154 253 92.0 7e-68 MRTVIQRVKYAKVNVDGKTIGEIDKGLLVLLGITHEDTIKEVKWLANKTKNLRIFEDEEE RMNLSLEDVKGKVLIISQFTLYGNSIKGNRPSFIDAAKPDYAKDLYLKFIEEFKSFGIET QEGEFGADMKVELLNDGPVTIIIDTKDANIK >gi|292606569|gb|ADGG01000041.1| GENE 132 124956 - 125402 517 148 aa, chain + ## HITS:1 COG:no KEGG:FN0350 NR:ns ## KEGG: FN0350 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 148 1 139 139 205 80.0 4e-52 MEKVYKSRIYRIIFNFLCAAVLSLVIFFIAQIWLSQTISIIIASLIFLFYIWLVIWGNFI TIIVTDKELIVKNGKKEDVYEFSKYYFRARTVSSRGDTECTLYAIDENANETIIDCELIG IGQFKCLLADLKLTGEQVNKLNTLKKDK >gi|292606569|gb|ADGG01000041.1| GENE 133 125426 - 125869 563 147 aa, chain + ## HITS:1 COG:no KEGG:FN0351 NR:ns ## KEGG: FN0351 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 4 147 1 144 144 212 79.0 3e-54 MRNIYIYVAIFIIFGVGYQIFMYMYANRRKKELLEWLEKNPKAAKVYIGKTSSLLGSIFT PSSIRLIAIDDNYPMTSFAEGFKQGFYLAPGNHRITSSFEKTRPGFFSKTVTTQYAPSTQ EVEVEAEKTYIYSFDKKNEQYTFTELN >gi|292606569|gb|ADGG01000041.1| GENE 134 126080 - 127594 1582 504 aa, chain - ## HITS:1 COG:FN0257 KEGG:ns NR:ns ## COG: FN0257 COG1288 # Protein_GI_number: 19703602 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 503 1 503 503 701 79.0 0 MKRKNWEFPTAYTVLFLILILVTVLTHIIPAGKYDRLSYQENTNEFVIESYGKDDEKLAA TQETLDKLNINIDVEKFTNGTIKKPMAIPNTYTKVSGQAQGVDDLILAPISGLADSIDII IFVLILSGIVGIVNKTGTFSLAMKAISQKTKGKEFLLVMISFLFFAAGGTIFGAWEETIP FYSILIPLFLVNGFDPLVPMATIFLASAIGCMFSTVNPFSTIIASNAAGISFNEGLKFRF GALVVFSLITLTYLYRYIKKVKENPEKSIVIEEKDEINERYLKDYQEETGVKFNWSKKLI LFLFVVQFAIMIWGVASQGWWFQEAAALFFLVSIIIMLVSGLSEKEAVNAFIAGASEVVG VALIIGLARAINIVMENGMISDTLLFYSSNLVSEMGKGLFAVVLLFIFVFLGIFIPSTSG LAVLSMPILAPLADTLGLSRAIVVDAFSWGQGLILFIAPTGLIFVVLQIVGIPYNKWLKF VMPLLIVITILTTIMIYILSVFFR >gi|292606569|gb|ADGG01000041.1| GENE 135 127769 - 128020 288 83 aa, chain - ## HITS:1 COG:BMEI1501 KEGG:ns NR:ns ## COG: BMEI1501 COG2261 # Protein_GI_number: 17987784 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 1 83 1 82 86 57 50.0 6e-09 MGIIAWLILGAFSGWIASIIMGKNASMGAIANIVTGIIGAFIGGVVFNFFGAQKVTGLNL HSALVSIVGACILLWILSAISKK >gi|292606569|gb|ADGG01000041.1| GENE 136 128033 - 128524 474 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783208|ref|ZP_06748532.1| ## NR: gi|294783208|ref|ZP_06748532.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 163 1 163 163 195 100.0 6e-49 MVTINLDMILKVLLGISLAVLLILLFIILIKIISIVSKINSLLEKNKEQIENSISQIPNL VKNSERILENTNDNLEKVNILVEDVTDILKASKRNIVNTSSSVSTTLENIKNVSSNVAES SRYIANNFAGKTSGSSNSGGIMATIDTILDCWDIFKTLLKKKK >gi|292606569|gb|ADGG01000041.1| GENE 137 128544 - 128951 719 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291460986|ref|ZP_06026273.2| ## NR: gi|291460986|ref|ZP_06026273.2| putative general stress protein [Fusobacterium periodonticum ATCC 33693] # 1 100 57 156 180 158 88.0 1e-37 MGLINYIHEKRLEKERAKRNEKIVGTLKVLAGVGAGVTLGVLFAPKSGKETRKNISDATK KGLNYVGENLANAKNYIEEKTSDIREALAEKYDELTDETISEKVEEIEEEIEEEIEEVAK KVEEKAKEVKEKAKK >gi|292606569|gb|ADGG01000041.1| GENE 138 129225 - 129770 849 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|34763431|ref|ZP_00144379.1| PROBABLE SIGMA(54) MODULATION PROTEIN; SSU ribosomal protein S30P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 180 1 180 181 331 95 2e-89 MKLSIHGRKITLTDAIKKYAEEKISRVEKFNDSILKIDATLAASKLKTGNAHVTEILAYL SGSTLKATATETDLYASIDKAVDIMENQLKKHKEKRSRAKVQDDTRKKSYSFDYIVEPEE KISDEKKLVRVYLPLKPMEISEAILQLEYLNRVFFAFTNSETGKMAVVYKRKDGDYGVIE E >gi|292606569|gb|ADGG01000041.1| GENE 139 129869 - 130840 1140 323 aa, chain - ## HITS:1 COG:FN0460 KEGG:ns NR:ns ## COG: FN0460 COG0113 # Protein_GI_number: 19703795 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Fusobacterium nucleatum # 1 320 1 320 322 578 87.0 1e-165 MFVRTRRLRRNALTREMVKNISIETSSLIYPLFICEGENIKSEIESMPEQFRYSLDRLNE ELDELLKLGINNILLFGIPAHKDEVGSQAYDKEGIVQKAIRHIRKNYSDKFLIITDVCMC EYTSHGHCGILHHHDVDNDETLKYIAKIALSHAEAGADIIAPSDMMDGRIAKIREILDEN NFKDIPIMAYSVKYSSAYYGPFRDAADSAPSFGDRKTYQMDFRSTNNFYAEVEADSQEGA DFIMVKPAMAYLDVIKAVSEVTHLPIVAYNVSGEYSMVKAAAKNNWIDEKKIVMENIFAI KRAGADIIITYHAKDIAKWLITK >gi|292606569|gb|ADGG01000041.1| GENE 140 130853 - 131674 876 273 aa, chain - ## HITS:1 COG:no KEGG:FN0458 NR:ns ## KEGG: FN0458 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 265 1 265 275 342 80.0 9e-93 MKKNFLFMFLLFLVNSIFSYSSIKAVNEKELQKVFNKNKEIIVVYRASIKDTIPKKYIEN IIPKEKINISNDNHIKNTIKYKQKNKLEVLAEIYTPSGDIIVKTEIKLKKEVLFNEIEKL VQEIKDNEASNQSDILNNKFSENFEENVKSFISYSYYDDRSLSSKTEYDFQRKNITMLTY SEGKILSESIAKYKGSIQDENMDIDFYENLSKTYTKMKVKKVENGQEVRTFYPNGKLQSV GIYKDNILNGVYKEYDDSGKLIKEVKNNGFIEE >gi|292606569|gb|ADGG01000041.1| GENE 141 131759 - 132163 484 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783213|ref|ZP_06748537.1| ## NR: gi|294783213|ref|ZP_06748537.1| hypothetical protein HMPREF0400_01200 [Fusobacterium sp. 1_1_41FAA] # 1 134 1 134 134 216 100.0 3e-55 MLNKLISFVKKNKALDVVTNSTDPTSFFTNLVEVYKEGKRTELEIEQLRLKKEVLLTEIE KKYDLYNKIFTEVFVERRMAIQKYFEIIDRGLAENNRDLISMGLSHLSQLVATSPFSDVA TLSKKLESKEIIEI >gi|292606569|gb|ADGG01000041.1| GENE 142 132173 - 133087 1223 304 aa, chain - ## HITS:1 COG:no KEGG:VS_1380 NR:ns ## KEGG: VS_1380 # Name: not_defined # Def: hypothetical protein # Organism: V.splendidus # Pathway: not_defined # 4 295 11 295 297 81 31.0 4e-14 MGWLKNLVTFGASGRIEKKVDEYDDYIYEYNQLYSQMEKKKEELNKTLEILVGKKVEAIK SLKKIKKISELLKGKDREAILEEIGDNQIKQNFYDVDETISAADIAMNTGKGLSAGIGTA VGAWALVSTYGVASTGTAIATLSGATATNAALAWFGGGSLAAGGGGMAAGSVVLGGIVAI PALALTGLFSHLKANKKIKEIEEKIYEVREANSKIKSNISGMEFADKRAVEIIDSLEKGK EVFESELKKAYNKIYPIPFFSALFKSIRKHIFRKAYFSEEDVAEIKYIGEIATNFAQIID SKVF >gi|292606569|gb|ADGG01000041.1| GENE 143 133417 - 133875 593 152 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1745 NR:ns ## KEGG: CDR20291_1745 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 49 150 14 115 117 73 38.0 2e-12 MKKEILAGKEYIVENGLYYPVNKECIFEKMGGAYRVVEIDKEYNVEVLIPDIEFEDIDNS KLNSIGRARLKYLQDYDKDKYLVFIATGELMSHLLSIQEEAEQMRENMLPSMKKEWGLTE QLKIDDQMKWVGLMNNLEATIKEIIFKELVYV >gi|292606569|gb|ADGG01000041.1| GENE 144 133898 - 134137 421 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783216|ref|ZP_06748540.1| ## NR: gi|294783216|ref|ZP_06748540.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 79 1 79 79 122 100.0 6e-27 MELCDLTLKKEVLREGIWEVLANFSKVENKMGTNSFLSLSSQKLFNQITKIPNMTEEEVK NLTAIKNFLNDILKEFKDE >gi|292606569|gb|ADGG01000041.1| GENE 145 134164 - 134421 432 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783217|ref|ZP_06748541.1| ## NR: gi|294783217|ref|ZP_06748541.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 85 1 85 85 139 100.0 5e-32 MKGYEATMKKEIAREFAHGVMGTACRIELKKGDSPILQIISKNIYEEICKIPNMTMEEVE NLNAISKFMMKTLVELEKYVRIKKS >gi|292606569|gb|ADGG01000041.1| GENE 146 134727 - 135071 417 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783218|ref|ZP_06748542.1| ## NR: gi|294783218|ref|ZP_06748542.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 114 1 114 114 207 100.0 1e-52 MEIKVYAGEVWFVDFPYEEDPAHIIQRPVVVLSEIDNQGTLEVLSVKVTSKDPRDEYDVP IIKYTEAGLRLKSVARTSKAIRLNKDYFIKKFGELDELDLESIIEAYKRYLENN >gi|292606569|gb|ADGG01000041.1| GENE 147 135085 - 135270 260 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783219|ref|ZP_06748543.1| ## NR: gi|294783219|ref|ZP_06748543.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 61 18 78 78 94 100.0 3e-18 MKKMINDFEKYLKENLKKVNELAAKNEVRDLNGRICIAKDDEWKDEVEWEESTTKTPSKI I >gi|292606569|gb|ADGG01000041.1| GENE 148 135772 - 136065 123 97 aa, chain + ## HITS:1 COG:lin0071 KEGG:ns NR:ns ## COG: lin0071 COG0582 # Protein_GI_number: 16799149 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 25 89 330 394 400 60 43.0 1e-09 MLLLLFYIREEGRELYKLKFLTNSFRKFLAKHNLTHIRFHDLRHSCATILCESNVNVKDI QMFLGHSSAKTTMDIYVHQMNKSNLSTVSIINEKIGI >gi|292606569|gb|ADGG01000041.1| GENE 149 136476 - 136955 569 159 aa, chain - ## HITS:1 COG:BH0965 KEGG:ns NR:ns ## COG: BH0965 COG4824 # Protein_GI_number: 15613528 # Func_class: R General function prediction only # Function: Phage-related holin (Lysis protein) # Organism: Bacillus halodurans # 22 131 18 133 135 65 33.0 5e-11 MTVEFLEIIAKICAYAIAFFIWLIGGWDTLSQVLFGLMFLDFLSGMFVGYKTQNLNSKRA FKGLRKKLLILVILCGASLMHKLVPELAFRTLVGLFYCANELLSIAENGARAGLPIPQKL KAALEQCKGDKCNTDSLKDKEKNIKPEDIKPEDFDKEIK >gi|292606569|gb|ADGG01000041.1| GENE 150 136999 - 137196 240 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783222|ref|ZP_06748546.1| ## NR: gi|294783222|ref|ZP_06748546.1| hypothetical protein HMPREF0400_01209 [Fusobacterium sp. 1_1_41FAA] # 1 65 1 65 65 100 100.0 3e-20 MKQIIFLLLMSFFIKGCANSDPGTTVVDIPLKVENISKEQLEETVKDKTVTVEKVGKKKF IRKKL >gi|292606569|gb|ADGG01000041.1| GENE 151 137193 - 137558 577 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783223|ref|ZP_06748547.1| ## NR: gi|294783223|ref|ZP_06748547.1| hypothetical protein HMPREF0400_01210 [Fusobacterium sp. 1_1_41FAA] # 1 121 1 121 121 240 100.0 2e-62 MAILDKTLEIVNKFVPDKNAQAELEKELRRLDIEDAKTKQKLFEKIIPITFPLCVWIGCA WCAWGLILSILAFILERRYIFFEVNVPTFLIMCCGMFGAGLWGKKNIGEYFKGKNNKGDE E >gi|292606569|gb|ADGG01000041.1| GENE 152 137568 - 138110 578 180 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783224|ref|ZP_06748548.1| ## NR: gi|294783224|ref|ZP_06748548.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 180 1 180 180 348 100.0 7e-95 MKVALIIGHNKRSEGAYSQIVGSEYSYWKRVAEKIKTVIPDLVDVYEREPNQYYTREMYK VLEQLNANDYKLCIELHFNAVENKMANGCECLVYYRNNKAKDLAINFMARLQNVFGSKIR GNHGIIEVKDSNVRGGYGICKSKDTYILVEPFFGTNNDEALKFSIESDVVNLFVNFIKEI >gi|292606569|gb|ADGG01000041.1| GENE 153 138107 - 138859 1034 250 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783225|ref|ZP_06748549.1| ## NR: gi|294783225|ref|ZP_06748549.1| penicillin-binding protein 1A [Fusobacterium sp. 1_1_41FAA] # 1 250 1 250 250 432 100.0 1e-119 MFYIYTKAKRAEVKFSVNLTAQEVRDYMNNNLFLDYPELNKDDYIIVESNEAFKNPTYDP STNMIREMSREELIEEGIEVQLEQGEVVRDKKIVKIPKPNKNEKYLTWNRDSAVWEYDSK REKDDYFNLVDQLKNEALEYGFDYKNHRQRLRTKDLIYMEISIKSLEIGKKKTKKDLKST WYFQDGFGMPMSVADLEDMMFSGTMFIQSIFNTESFFKTEIEPKELTISEFKDKVNELHN LVMKAVGGNE >gi|292606569|gb|ADGG01000041.1| GENE 154 138930 - 140105 1377 391 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2509 NR:ns ## KEGG: Sterm_2509 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 173 1 170 362 87 35.0 1e-15 MAEFNSHIITNAGRNLLARALAGEGKVIFTKAAFGDQKHSGNLREVTELKNKKLDLNVMN IRNDNGTAVLTVQISNQNVDQSFQTEEFGVYAKIENDVSEVLYSYTTAVSADTFPNNRLG KTYESIQDIYMAISSDVEAEIYVRDGVIYLTRDIANQVYTETGITAVGTLKGRSNLEENK QYLADNGHWYKNIGGNRSWNSLGTPDEQLIPITWEYLYKSLNTKEGQLIQNLNGLLGKNN GQFPVDQAVEGNVYYFPANQKYYYCLKSQSGRTSVPNADFEEMSIWANKKKLENLTRKTI LLFYNGGSLVPDGTTSIAINENWYFFGLGVGTAVQSGKERMCFLFRTIFQSNNDILRFNG IEIRYNATNKTLKVINNGGNLYFLEQYSSLI >gi|292606569|gb|ADGG01000041.1| GENE 155 140098 - 140751 542 217 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2510 NR:ns ## KEGG: Sterm_2510 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 4 173 2 171 213 76 33.0 7e-13 MKEQNFIYDVTNIRDLAPDILRNDKQYKIVLTVIDALISKHIVANIEYLEFLERINTMEE KEIDLVAKELSVDFYDFSMSIEEKRKACKLSFQIHSIKGTNKAIQDVLNIFYEKANILEF PEFNGDNGTFKIEIMGTTKSNLNIMIDRVEKTKKKSQHLIGITFKNNSISPLYVATHMRY GTRVILYPQQDYFYLNNLNLVSKTGKYILEKRGVNNG >gi|292606569|gb|ADGG01000041.1| GENE 156 140748 - 141848 1109 366 aa, chain - ## HITS:1 COG:STM4202 KEGG:ns NR:ns ## COG: STM4202 COG3948 # Protein_GI_number: 16767452 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 1 362 3 367 371 125 28.0 1e-28 MKEFNLIDSNPESILADALRFHEEITGERLELCTKEAYLYSTVAALLANIKANMNDVAKQ NFLKYSREERLDLKGNFYGERGIRLKANKARTTIRCHISSIVAKDVIIAKGTRFLYKNYM FYTEQEYKIKQGQTYVDVIAVAEIAGELGKILAGDIKEIVDRYEYIKEITNITDVTGGRE EENDDEYRKRLELIPESFTTGGSEGSYEYWVKKSSNLVTDVFINSPRPNYIDIYVVNGLE HLSQEEKQKIKNYITENKNIKVLNDQLEIKDPVFHNYNIDLDYWVYDNSLVSKSEIEKEL RSSLEQYTKSFKMGESINLQDIIDISKNVEGIRRVEIKSPQTYIGQKFHLAKCGTITISY KGAESR >gi|292606569|gb|ADGG01000041.1| GENE 157 141835 - 142116 383 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783229|ref|ZP_06748553.1| ## NR: gi|294783229|ref|ZP_06748553.1| hypothetical protein HMPREF0400_01216 [Fusobacterium sp. 1_1_41FAA] # 1 93 1 93 93 164 100.0 2e-39 MIVSNNVVPKHPKLMELYVLLNTKRGTVPLHRDLGIDNRMIDRPITVIKNNIFNELQMQV NKYIKGLTLNNVYCKATENGLEIECEVEIDERI >gi|292606569|gb|ADGG01000041.1| GENE 158 142128 - 142796 838 222 aa, chain - ## HITS:1 COG:no KEGG:Dred_1218 NR:ns ## KEGG: Dred_1218 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 24 149 2 128 129 73 30.0 7e-12 MNVLSRLTKDFLNNFTNLNFSSNLGSYGDIVFTVTRDNVLTPEGIDLTISSKIEEHDNLG EAPYTEFIHRNLRAISLNIKLVYTLTNISDALLKLEKICENGEYYPLILGNKPLSKYGFI LIDFKQGIKSTNSNGELEVVNCSLTLKEYIPKLDRLLLPTTNNLTTENKENTRNNNNNRS NQKNTKKNKKVLKKKSKTNVYSKNKDEKKWLRGLVEDDLRGY >gi|292606569|gb|ADGG01000041.1| GENE 159 142793 - 143320 736 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783231|ref|ZP_06748555.1| ## NR: gi|294783231|ref|ZP_06748555.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 175 1 175 175 294 100.0 2e-78 MTKLEGAVGIIQSVNTADYTASVKFPEYNNEILDGLQILSPITFGNKITSIPKVNTPVFC IFLGDKTEKGYIIGSYFSDENVSNSQEDEYKIDFQGSSLTIKEDGNIELKGTLTKIDSEV IITGDTTIEKNMTVTQNVTVSGGMSAKKGFETEKATLKNGKLDVQSIEYKEMSKK >gi|292606569|gb|ADGG01000041.1| GENE 160 143320 - 144366 1056 348 aa, chain - ## HITS:1 COG:STM4208 KEGG:ns NR:ns ## COG: STM4208 COG3500 # Protein_GI_number: 16767458 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 13 337 19 341 347 90 24.0 6e-18 MASSNLVRRASPTFFINNKDVTEEMLKHIVDMEIVDNLEGTLDEIIIKLNNENNRFLTTN WAIPKGTEAKIGIKTLNWNSEFEGESYSDIGIFNIDIRQFNRKTATFKGISAPLSSRDAK RSKIWANISLEALGKEFADRYKLKYFYKVKENITLKNIKQEEEEDFSFLNKIAQEEGVKL KISSGILILFEEEILSENTALLSISLDNVEEFEIKDKSNDIYDAIEVKYFDTKKQKEEKV IITKQELETGQKSDNYKKVYSIKSRAKSGDLKKLAKKTLENINKREIEASLKIIGCKELY SGCIISLSDAGEFSGNYVVTRLQHNFPKFITSIEMYKIKKDMKEENKK >gi|292606569|gb|ADGG01000041.1| GENE 161 144348 - 144560 370 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783233|ref|ZP_06748557.1| ## NR: gi|294783233|ref|ZP_06748557.1| hypothetical protein HMPREF0400_01220 [Fusobacterium sp. 1_1_41FAA] # 1 70 1 70 70 121 100.0 1e-26 MQEQVYKTEAGDTWDLIAFKLFGNENLMQELLEENIELSEIVIFPAGVELSIPEIKEDKK RGVAPWLVQI >gi|292606569|gb|ADGG01000041.1| GENE 162 144541 - 147447 3954 968 aa, chain - ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 24 641 33 629 696 172 24.0 3e-42 MFLAKRMDLIMKVQGLIDKSLPGNLKKLANEVKNLRAERQKMEKAQKTLKAQKELNKEIT ANVAKYRKLRNELKALDEIKKRNVNLTEAEKKKYESLTKKAKALETTIKSQSKSFQKYGM ELKKLKIPFDNLQSEIDQTIRKEKELIAQQKIVAKSQGFFKGAKDKVKTGMKVAAVATVG AAIGIGTSSAKEYLEFDKQMIKVKALTGATAQEYEALKKKAMEVGKTTIFTSEEAAAGME KFALAGFKPKEIISAIPPIFDLATASGEDFIMISDMISDNMTAFNIGIDDVGHASDILAN TMSRSNTNIQMLGEAFKYVSSSANNLNIDLSTTSAAIGLMGDQAIKSGQAGRDLKQAFSK IADAGVQKKLQKLGVNVKDAKGEFIGLVDFVRQLEKVTKMSGIDKQAFLKDLFGDQGSLA MNKLLTATKEVNGVMYEGADALAEFAKENENATGKAKEMAQTILDSDSGKWALVESAISD VKLKIGKAIFSSGGTQLMDTVMSWLNELSNVLDGNLNESEANKFWQSFIENGKMALNSIK NIGIVLWNVFKVLNTIGIDNILVFVTVFTATSKVLKFAGAVKEVFTTVKAAGGIMSALKA GIAALGGPISLVIAGVALLGFIIYKNWDKIKVFFKAAWKTVKGMGTIISGIFKAVVDGVV NLFKWLWNKLKTYFNNFGFLLLGPIGIFIKLGQLIYQNWDLIKEKLSSVWEYIKSIPEKV VETVLNFISTIGNFLVNPVNEVINGIKNLFIKLWDTAVQFFNNFGFLLLGPIGIFIKLGT VVHENWDLIKNKISSIFESFKNTIKNLAEQIKSFFANPFEYMSEAIAGAKEKVLDFARKI PGVKYLVGEKENVAKVNGSHANGLNYVPFDGYIAELHKGERVLTKDENESIFGSLRNRLH SATQSNQSENSSKETNVTYQINNTFNFTGVSEDTKNSIIEKLQESLNELQRQLEKIKEER ETYARTSL >gi|292606569|gb|ADGG01000041.1| GENE 163 147620 - 148003 539 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783235|ref|ZP_06748559.1| ## NR: gi|294783235|ref|ZP_06748559.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 15 127 15 127 127 170 100.0 3e-41 MEKFKEELKEAKEELNRINGVIETEIDEKIDGEEEKEKGLIRKVKISDGREFIFDFGKLT GNSIIEIKKNYGKLRKKTASLVEELDDFYYMLVAEYVSKYKYTTFLKLSYKDFAKIRDEV KDFLLDD >gi|292606569|gb|ADGG01000041.1| GENE 164 148015 - 148524 746 169 aa, chain - ## HITS:1 COG:no KEGG:Spro_4913 NR:ns ## KEGG: Spro_4913 # Name: not_defined # Def: major tail tube protein # Organism: S.proteamaculans # Pathway: not_defined # 20 166 21 169 173 67 30.0 1e-10 MIRSTIIEDAIIRLNGTDELVGIANITLPDIEHKTETISGLGVIEHDEPIPTAFNAMKLQ LKFINRNKNIMFGYGSNVNLTAKAAILVEDSETHENDEIEAIFSFKGKRIKTGGGDLGKA VKNETELEFSLTYYKEEIDGKVIHEIDVYNKKAIVNGKDLYEKVRSILS >gi|292606569|gb|ADGG01000041.1| GENE 165 148534 - 149982 1609 482 aa, chain - ## HITS:1 COG:STM4213 KEGG:ns NR:ns ## COG: STM4213 COG3497 # Protein_GI_number: 16767463 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 2 476 3 468 475 108 24.0 2e-23 MAKFQHGTSYKEMPSGLKIFVETQTPTVIVGTGTVNMGDMSCVNKPVLIQNAKDAATYFG STNNIKGFTINEALYLAFNVFNVKPIIVINVLNPSEHKTAHTEEGVVVKDFKATLVKPGI INDENLVVKNNETSVVVQKEKYTCSFDDEGKLTVTLAKTETAIKKIDVSYNFLDVSKLKE TDVIGSIDPQTLEAKGLECLKEIFPKYSMIPSCVVAPDFSTAKIRVALDAKSAVINDKWA SMSIPEMPNTTKYGEIIAFKKEKNYIDADQAITWGCPYIEDEVFHFSTVMALHMQSIDAQ FDGVPCESPSNKNIKMQGVGYYDGSTFKKVNLDEAEANLLNENGISTIIRQPNGTVFWGN RTSVFQPGGETDPKDIWIPVKRMFKYIGNTIMLNNTVEVDKGMTPSQAKSIETNINVWLN SLTNDNKLLGGRVEFKPEENSEQDMIAGKFKWHIYLGAIIPGESLEFRLEYDSKYLKLLF QR >gi|292606569|gb|ADGG01000041.1| GENE 166 149991 - 150314 511 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783238|ref|ZP_06748562.1| ## NR: gi|294783238|ref|ZP_06748562.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 107 1 107 107 119 100.0 7e-26 MAGIKNEKEKDKAVVAENTNSTETNVNNETTNTEVVTQNQVTTEIKAEIKEDKTYIYIGE EVTKDGFILKYKGFYTSEQLNKIKNGMSNYEEIEGNFIDLDEYSEDK >gi|292606569|gb|ADGG01000041.1| GENE 167 150302 - 150850 491 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783239|ref|ZP_06748563.1| ## NR: gi|294783239|ref|ZP_06748563.1| hypothetical protein HMPREF0400_01226 [Fusobacterium sp. 1_1_41FAA] # 1 182 1 182 182 315 100.0 7e-85 MERINPLKKNSLALESAIKKAFEEAKIEKFNFYRSYIQPENLENRIKNATNKENKFPFVI IRPVKSIQKAKGGFTTKVATFLIRLGTENKDYEEGFYEIAGIAEYLIAYFTKYSSATQKK DGFSYSIDLENIESYLNEEITGGDYWVYDILLQLNIPSVPHTAYLEESEKGVSKEKEEKW QE >gi|292606569|gb|ADGG01000041.1| GENE 168 150838 - 151383 567 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783240|ref|ZP_06748564.1| ## NR: gi|294783240|ref|ZP_06748564.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 181 1 181 181 293 100.0 3e-78 MYTLEISEESLKKLEKIGKEFSGMDNKIVKEALRKALNYAKKEEKKFIKSRYSLKQSLDS STLKSQITSTDGVLLGSTKRNKISEFAISKPNPGKSKQYIKTKIVKPRPEMTWKTLFWAF WKKGSPRLMFRVGKEKHKITLATSLSVRNMGLQIDNEKIYEEIQNIFSKVLEERIDAIWR E >gi|292606569|gb|ADGG01000041.1| GENE 169 151386 - 151712 336 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783241|ref|ZP_06748565.1| ## NR: gi|294783241|ref|ZP_06748565.1| hypothetical protein HMPREF0400_01228 [Fusobacterium sp. 1_1_41FAA] # 1 108 1 108 108 191 100.0 1e-47 MNNSFKADIDKTFFTDFAEKIDLSGIKLKAVITKVQNNPKMTGKFKESLDSSILVRNGLK VSIKTRDLPSSISIEVGENITIDDVSYYVYDVEKRHGMIHIYVQKYEG >gi|292606569|gb|ADGG01000041.1| GENE 170 151705 - 151950 427 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783242|ref|ZP_06748566.1| ## NR: gi|294783242|ref|ZP_06748566.1| hypothetical protein HMPREF0400_01229 [Fusobacterium sp. 1_1_41FAA] # 1 81 1 81 81 96 100.0 4e-19 MEKMIAIKNIRVGEILYKPGEEFEIDEVETQRLIDLNAAMFANNEIEATTEVTEEIKEET EAVVGAVKETTSVNKKGKKNE >gi|292606569|gb|ADGG01000041.1| GENE 171 151964 - 152992 1242 342 aa, chain - ## HITS:1 COG:no KEGG:CLH_1724 NR:ns ## KEGG: CLH_1724 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 342 1 348 348 105 24.0 3e-21 MSSKIFGLIALTAIIEQTKTPKNFLYNLLVGEEKAEKVQELEIHTKEAGRKKAPLVGKRQ QGIFIVKDSFAVQRVKPAWIKLQTVNEAEAVFEQQFGQTPYADPQAVGKQMLADSMKEFK NIAFRTRQWMLIETLKTGVCPMELGTEGVKYGDINTEVLTGNDLFSSPNCNPIDYLEKKQ TEIQKETGVVIDTVIFSPDVAGAFLKNEKVKEYLNTRHANYIRVNDSKSENDDGRKEIAY LPTLGITIFSFVDWYQDMETGNEEQVVPAKTCIGVKAKSFAFKYAAMSIRTEQGKPAQLL VKKEAIRKWYPDYSEDEELQYFSRPLCMPREDVKSWFIATVL >gi|292606569|gb|ADGG01000041.1| GENE 172 153005 - 153331 390 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783244|ref|ZP_06748568.1| ## NR: gi|294783244|ref|ZP_06748568.1| hypothetical protein HMPREF0400_01231 [Fusobacterium sp. 1_1_41FAA] # 1 108 1 108 108 178 100.0 9e-44 MKNKKEIHETSNLKRDLKFPFYTEKVEFEAGEYKMGDLVELTTDGKVKKLATAAEIYGVV TDDFTADSNDKKNTIYLTGSFNEKYVDFNGKDKAEVKRAARKLLIMIG >gi|292606569|gb|ADGG01000041.1| GENE 173 153340 - 154374 1281 344 aa, chain - ## HITS:1 COG:STM0912_1 KEGG:ns NR:ns ## COG: STM0912_1 COG0740 # Protein_GI_number: 16764274 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Salmonella typhimurium LT2 # 12 179 61 222 225 125 42.0 2e-28 MEILNQARKNKNELNIQIYGQIGGFSWFDEPVSADQVYKELENFGNDIDTINLYINSPGG SVTEGCAIYSALKRHKAVKNVYIDGQCSSIASVIAMAGDKIAMSPVATMMIHNPITALAG DAIELRKTAAILDIMKDTIINAYVTKSHLSREEISALMDTETYFTADQAIEKGFATEKIV FDIKNSEFSNLENFKIRDKKIINSGNTEKKGGESMGAKNMQELEAQNKELVEDIRKEAIA QERKRINDLDALNEQTQGKCKEIIDAAKESGKSKADIVEDVLARFIENKGTEEKTKVPEN KSPADILNTRREESKQIEIDNRTPGQTDDTKNLIADIVNMANEE >gi|292606569|gb|ADGG01000041.1| GENE 174 154343 - 155875 1527 510 aa, chain - ## HITS:1 COG:RSc0857 KEGG:ns NR:ns ## COG: RSc0857 COG5511 # Protein_GI_number: 17545576 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Ralstonia solanacearum # 67 500 54 478 508 148 28.0 2e-35 MKKVNTEINKLNQELKTEEIRYKIEAIRQQREFLNYSQSGASTTKIAFRNVYSSLDTTKD DIEDNKEILMARSRQLFMGNPISRGAILKIRTNVVGEGLKLKSKIKKNLLNLDNDEVEKI QKQIETIWDLWADSVECDFQGEDTFDFLQDLAMITYLMDGECFINLPYHQRKGELFDLKI QFLDSANCEAQESNDYLYEGVETDKNGVIIAYHFKDRHNEYTRIPVFDSTGRRQILKINE KERVNQLRGVPLLAPVLEILSQLSRFTNAELMNAVVSAMFTAFIKQDNNTGNTGKVLGVG EDKFKKPNGDQGKKYEGTELSMGYGNFGVLEPGQDLVFANPNRPNSRFEVFFNAMLKQIG TALEIPFEVLLAAFNASYSASRAALLEVWKMYRRRRKWLAKKFCQPVFEQVIEEAVLKGY IDLPGFLENPIAKKAYLGAVWYGNSPGQIDPVKEVTASVVKINNGLSTREREATELNGSD WNENLDQLAIENKKKKEVGLDGNIKSSKKE >gi|292606569|gb|ADGG01000041.1| GENE 175 155884 - 156294 725 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783247|ref|ZP_06748571.1| ## NR: gi|294783247|ref|ZP_06748571.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 136 1 136 136 238 100.0 1e-61 MRNIASFENKLIEIEEAEEDLILHGSAWVAGVEFLKENPDDMKKLADLKEHYKKKIDEIL NTKITIQECERYIRLYLEAEEAVLKGQEYTIDGQNLKRADLEQIRKGRIWWENKKSQIES GTGEGIRFFQIVPHEF >gi|292606569|gb|ADGG01000041.1| GENE 176 156291 - 158111 1700 606 aa, chain - ## HITS:1 COG:RSc0853 KEGG:ns NR:ns ## COG: RSc0853 COG5525 # Protein_GI_number: 17545572 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Ralstonia solanacearum # 2 558 6 585 660 271 31.0 3e-72 MYERTRELIKECLRILRQPPLVSIMEWANQYRVLDTTSAKEVGKFNVERTPYMIEIYEKI TKGETKQVTLMMAAQLAKSELIINTILRYAHLDPCPMLIVQPTDEMARSFSKERIQPAIN NSILHTIIKEPSKKDSGNTVTHKMFPGGYIAFVGANSPSKLAARPIRNIFLDEVDRYPKS SGNEGSPISLAKKRTSTFDDITKHIITGTPTVKGSSEIEDEYNNSSQAEWYIPCPNCKKE QTFKWGNIKFEPDGSNVRMVCPHCGKAFTEKEWKKGNEKTGRWIHKYPERTKNLGYHLNG LASPFRNWESIVQEWLEIKGDVEKLKAFINTVLAETFEQEYTGRLDPKKLIKRTREKYSY IPDKALILTAGVDIQDKWIAIDINAWGLGYESWGMEYIILHGDLNQQEIWDRLDKVLDKE YFYQNGDKLKIYSACIDTGGHHTQKVYDFVSPRQYRRIIGIKGLGGENVPINNGFRKTKN KEIDLLSIGSNALKDIVSGRLDARINEEGYCHFNGEYGKGYDLEYFKSLTAEIKVQENRK VVWKKIQTRNEGFDCKCYATVPFYIFRIEPENLVNLSRAELLELSINGVLTLKKQEIAID RKGVEV >gi|292606569|gb|ADGG01000041.1| GENE 177 158104 - 158706 658 200 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783249|ref|ZP_06748573.1| ## NR: gi|294783249|ref|ZP_06748573.1| hypothetical protein HMPREF0400_01236 [Fusobacterium sp. 1_1_41FAA] # 1 200 1 200 200 329 100.0 7e-89 MGENMILANEKQLSKILNISDRRVRELFKDYKSENGSYPLIKCVTEFINQTRSGDINLVT QKTFAEILGLSEKTVKELTNRGVLEKNSNGQFDLKDNLKRYLTVNDERNKKKAVERELQQ YKLEILQDKYHLDEDVKYVLTDILVKFKAKLQATAVKIDNEITEISEADRLDYLKNTLID CLEELANYNPPSNRRKAKDV >gi|292606569|gb|ADGG01000041.1| GENE 178 158820 - 159500 717 226 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783250|ref|ZP_06748574.1| ## NR: gi|294783250|ref|ZP_06748574.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 226 1 226 226 379 100.0 1e-104 MSKLDNFNEKQLKVLEIYVELELIKFSRKKKDIYDEIQKRTKYNKNTIISWINRYLTQYK EIRAEVVEKRNSKICNFEGLTEKQTKYVIYRMSGIGKEEAKIKAGYSENTKAANIEKSPK IATKITELREILFQDTELGILSIATRLNKILNSAIDGVDIIEYIDESSPDGHTVSKRVRK DKPLLAGVAAARELNSMLGYRVVDEVKLKATLNSENDTAVSDDDFE >gi|292606569|gb|ADGG01000041.1| GENE 179 159503 - 160819 1478 438 aa, chain - ## HITS:1 COG:BH3535_2 KEGG:ns NR:ns ## COG: BH3535_2 COG0863 # Protein_GI_number: 15616097 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Bacillus halodurans # 147 408 2 280 292 271 48.0 2e-72 MEITKINLDVLKENPNNPRKSTDSQINLYRNLLDRFGCVFPIIVDSNNYVVSDYAKVEAA KILGLTEIECIYIENLTEDEIQTIRIGEARAIELGEWDYQKLFEELTKLGENLDLTGFNI DEIEALLPVEILDENEIKEIDIPEVEEKHFSKQGDIWLLGKHRLMCGDSTNLEDVKKLVN NETMDLMVTDPPYNVNYEAKNGNKIKNDNMSSENFYSFLLEFYKNSFEVMRTGAAYYIFH ADSETKAFRGALEEAGFKISQCLIWVKNQFVLSRQDYNWRHEPCLYGWKEGAAHYFIKDF TQDTVIEKDLKSIENYSKKELINILKQLLKEQESIIRENKPQRNDVHPTMKPIKLIARLI HNSSKKEWNILDLFGGSGSTLIAAEQLNRKSFLMEYDPKYADVIVKRYRTLGKLDITLLR EGKEYKWEDIKDELISEA >gi|292606569|gb|ADGG01000041.1| GENE 180 160995 - 162080 578 361 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783252|ref|ZP_06748576.1| ## NR: gi|294783252|ref|ZP_06748576.1| hypothetical protein HMPREF0400_01239 [Fusobacterium sp. 1_1_41FAA] # 1 361 1 361 361 645 100.0 0 MYGLDRACIYIDVQTDILYVRERVKIIFPHSFSESLSNHTNNYKIDKKNINYIKLEEKKI KRLTTIKIDFSYPRFFSDDNIYPLSDETRKIIVENNLVKLINSLIDYEITAEAVRYEYLE FTTQEVVGNFYKFHNIVSYFFKALTRKYDDLDKVQYYNFNQNENKFYTTGFSFQPMSGWK IKLYSKGHENNKKNARKVKGAILRLEHRLTKKIIKNYFEFNSIKYITIENIKDCIHNTIS QTLGQILIDEVEKSVEVLKEKFFNFRCQDLDSLVRDNLEWIFDYKILDDIVTSSSTKCYR QIVFYRSKIKDILNHSQQRASPQRDFFSNIERLELFFANLILFNCKVKCDTKNHLAFFCK K >gi|292606569|gb|ADGG01000041.1| GENE 181 162080 - 162268 301 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783253|ref|ZP_06748577.1| ## NR: gi|294783253|ref|ZP_06748577.1| hypothetical protein HMPREF0400_01240 [Fusobacterium sp. 1_1_41FAA] # 1 62 1 62 62 108 100.0 1e-22 MPKAKNSDREIAHDYCSCGEYLYSVTEERIRVARGRRVTVYLKKRELEITCPHCNKEIKV KF >gi|292606569|gb|ADGG01000041.1| GENE 182 162235 - 162483 276 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783254|ref|ZP_06748578.1| ## NR: gi|294783254|ref|ZP_06748578.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 82 1 82 82 127 100.0 2e-28 MNFNQCDYTYLIKIISKEKIVYDNTEYQNVIEKCVFSNRKTFKQGYKELSKKYNEENYLI LTYQKIRRSWYECPKPRIRIEK >gi|292606569|gb|ADGG01000041.1| GENE 183 162520 - 162705 267 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783255|ref|ZP_06748579.1| ## NR: gi|294783255|ref|ZP_06748579.1| hypothetical protein HMPREF0400_01242 [Fusobacterium sp. 1_1_41FAA] # 1 61 1 61 61 90 100.0 2e-17 MKENQDTSFLKEVKKKLIDLDMTFSELRKKTSYSSDWGLRKALKNNKPAAVDEVQKILVE I >gi|292606569|gb|ADGG01000041.1| GENE 184 162840 - 163301 263 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783256|ref|ZP_06748580.1| ## NR: gi|294783256|ref|ZP_06748580.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 153 1 153 153 214 100.0 2e-54 MKLYDHINLDIARLQAIEAIDFKTEDNKKDFIKQLESKEKKLSKSIEKYSKKISDIEMDS MKKLTMFLSVFTLIAGNISIIFKGIDIKPNQLVALIFIVNSTLILAIHTLFNLATKEKYR KSILFFCIISILIGLSILVFSDVISLIMLFCLK >gi|292606569|gb|ADGG01000041.1| GENE 185 163379 - 163594 201 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783257|ref|ZP_06748581.1| ## NR: gi|294783257|ref|ZP_06748581.1| hypothetical protein HMPREF0400_01244 [Fusobacterium sp. 1_1_41FAA] # 1 71 1 71 71 90 100.0 2e-17 MTKKFMNEAETKELIGFIRKLSTENINEENINIYFDLLENIYGKDGKKDTYILQFFHFYI LFISIKKKELL >gi|292606569|gb|ADGG01000041.1| GENE 186 163601 - 164059 629 152 aa, chain - ## HITS:1 COG:Cgl0313 KEGG:ns NR:ns ## COG: Cgl0313 COG3600 # Protein_GI_number: 19551563 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Corynebacterium glutamicum # 6 141 6 138 148 71 33.0 7e-13 MLKYDALDIAKYIIRWCDKNKLRITNLQLQKILFFIQKESIRKRGYGIFSNRIEAWQYGP VVPDVFYQFAGFGAMKLVLYEDLFSDVSPKDIIDDQSKEIIEGILREYIHVSPWDLVAKS HVSNGAWANSISMGEKYPITDQDISYEILKGL >gi|292606569|gb|ADGG01000041.1| GENE 187 164221 - 164910 870 229 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783259|ref|ZP_06748583.1| ## NR: gi|294783259|ref|ZP_06748583.1| phage repressor [Fusobacterium sp. 1_1_41FAA] # 1 229 1 229 229 358 100.0 2e-97 MKLNEKEMIELGNFLAEKRKEKGYTLEELRLKLQSKGLIIEKSDIQRIENAERKLPNPIL LCHLANIYEFDIIEVYKKIGYLPKKERNISHNVAEEIKNDYSVTLEQNENTQQIKIYSSL SLALGKFSDIENSDEYTLSLPINEKNLNNRIIGVKEKNNKIIIIKKDEEVKNNEIGAFYF NKSWIIAVKKISNRDEIFLIDSKKDCPIYVKETDNFKEMGKVICEINML >gi|292606569|gb|ADGG01000041.1| GENE 188 165383 - 166114 670 243 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783261|ref|ZP_06748585.1| ## NR: gi|294783261|ref|ZP_06748585.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 243 1 243 243 370 100.0 1e-101 MSYKFSKEDLIKLENLKNLSNSQLKFISSINSQISFIDVGTLKRIKQIQNIDYDILEKIK LNIPKIDITALQKALLEITNFHNQFASVYDFKFISELQNTFAKLNIINKNYFKIFSQSSF VTSESNKDKKENEAIELLNSISEDIEKSLTEEDIENFSSIDEFNSIEKDAKNYNKMLSKN DIVVLISIFFYLLLIFKREEIIQLSILIREHFGKAGIWLLDRQEAILALIGICLTQIIDK DDK >gi|292606569|gb|ADGG01000041.1| GENE 189 166182 - 166943 679 253 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783262|ref|ZP_06748586.1| ## NR: gi|294783262|ref|ZP_06748586.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 47 253 1 207 207 355 99.0 1e-96 MKKIFIFFTFLSLLVACGNEKNGNNSTSNNITSEAAQSKILDYSFDVEQNIKNTKLQGDV SLDFINGKIPTFDEMKLIAEDIAKKYPNYQNYFINFKFPLTDTSERRNEDNYNSLCLFTK SDNSDFRLVLHYNNIPTMDLTLNKNIVGHLGINLISNISPIKEGMSLSQVKEKLGDPAEI NNETKESQYYILNENYQVLGILFIQYTGDNVKVANFFSLNNNFSKEQLSAIDSYIAGNIK LEDLKIKELKDIY >gi|292606569|gb|ADGG01000041.1| GENE 190 167054 - 167269 272 71 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0816 NR:ns ## KEGG: Sterm_0816 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.termitidis # Pathway: not_defined # 1 67 1 67 69 89 67.0 3e-17 MIKFKIHIKMAEKRLSQKTVSQYVGITPTVMGKYFHGTITRINPEHLDKFCKLLECNTQD LIEYIPDNTQD >gi|292606569|gb|ADGG01000041.1| GENE 191 167619 - 167843 363 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783264|ref|ZP_06748588.1| ## NR: gi|294783264|ref|ZP_06748588.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 74 1 74 74 97 100.0 2e-19 MENEFKEAALSFLEGLLDSGKVESKTKKEISDLYEELQKSNISEELQHLIFKTIENLKKE YFDFGFLAYKNFKE >gi|292606569|gb|ADGG01000041.1| GENE 192 167984 - 168109 105 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLTELQELINKYGENTKFIEIKEELKKLGYPCKIAGEKNV >gi|292606569|gb|ADGG01000041.1| GENE 193 168102 - 168296 98 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783265|ref|ZP_06748589.1| ## NR: gi|294783265|ref|ZP_06748589.1| hypothetical protein HMPREF0400_01252 [Fusobacterium sp. 1_1_41FAA] # 1 64 6 69 69 104 100.0 2e-21 MFENFRTIYIITNADKTILSAFTSEEEAKKEIDFKYSILPEKFYIQPCCLNIDKSFVEEI KKRF >gi|292606569|gb|ADGG01000041.1| GENE 194 168308 - 168484 305 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783266|ref|ZP_06748590.1| ## NR: gi|294783266|ref|ZP_06748590.1| hypothetical protein HMPREF0400_01253 [Fusobacterium sp. 1_1_41FAA] # 1 58 1 58 58 80 100.0 5e-14 MKSREYIENKIKQLEDLRSELLKEYQEKLDAGNNDEVLWQYISNKNIEIWTLKDILND >gi|292606569|gb|ADGG01000041.1| GENE 195 168499 - 168690 394 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783267|ref|ZP_06748591.1| ## NR: gi|294783267|ref|ZP_06748591.1| hypothetical protein HMPREF0400_01254 [Fusobacterium sp. 1_1_41FAA] # 1 63 1 63 63 85 100.0 7e-16 MYIKNREKLEKALANLIKEMINQEMIDENKKEVADQLLAAREYEIRQICENIADQYAFIK KPL >gi|292606569|gb|ADGG01000041.1| GENE 196 168706 - 169677 1037 323 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783268|ref|ZP_06748592.1| ## NR: gi|294783268|ref|ZP_06748592.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 323 1 323 323 510 100.0 1e-143 MLEKTFKQLLMSSNYYTLNKQIVKTLGIEPAFLLTILIEASDGLADDEGWFYQTIETLED LTGLSRHKQNKIIQDLIEASILIQENRGTPCRRFFKISFQEIENLVFKKTETSLLKIDKL DCKKLTNYSVKKSQTSLLKIDNNKEHNINNINKELNHKEEKAPDDLKKIKEWFKKNEIDF SKKHEDKIIELLKNNSIDYILNLFQGQIDILKNKKDVKNIAAVFSAHLFKGTCEVNLQAI EQKELEQEKIKKEQRKEYKGNDKAMEVFKSLPTEQQLKIEDEIIEEFKNPALREIKKNTE VVFYLMISQKIKEKITELGLLSA >gi|292606569|gb|ADGG01000041.1| GENE 197 169689 - 169919 376 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783269|ref|ZP_06748593.1| ## NR: gi|294783269|ref|ZP_06748593.1| hypothetical protein HMPREF0400_01256 [Fusobacterium sp. 1_1_41FAA] # 1 76 1 76 76 139 100.0 5e-32 MGETVKINMPFDKWCKLQKDFERVNSKLPENEKLDFEKYKYCVDWGRLSFDLHGIEMGAF KRLKEPEFYNKKGENY >gi|292606569|gb|ADGG01000041.1| GENE 198 169920 - 170303 498 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783270|ref|ZP_06748594.1| ## NR: gi|294783270|ref|ZP_06748594.1| hypothetical protein HMPREF0400_01257 [Fusobacterium sp. 1_1_41FAA] # 1 127 1 127 127 231 100.0 9e-60 MILHGKFYSITTGGVYKALNVDFKERKIKGTNKQAGEQEFNFSDVIWLESTGIKINKNYI YTDDYVLAVKDHNVIACGVVKKRADGSYAIVNKNQGIVNPLLQLQFDGAKLINLQNHKIY FAKKNQK >gi|292606569|gb|ADGG01000041.1| GENE 199 170313 - 171017 728 234 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783271|ref|ZP_06748595.1| ## NR: gi|294783271|ref|ZP_06748595.1| hypothetical protein HMPREF0400_01258 [Fusobacterium sp. 1_1_41FAA] # 1 234 1 234 234 434 100.0 1e-120 MGVILVKNNKGGVGKSWIALQLAAYKAFNNEKVLILTSDSQNNILNYSGIKVEDTSKKGL EDMLEGKPYNLTKLRPNLFFLHLQGYKVKGNLDEKFKKRINSLKDEFKHIIIDGSPVMDL DSIFVDVAEHIIVPTFLDSVTTSSILNLLKKTDISKIRAVIPNRVGRTRIEKNFYTFLKD TLTRSGVFLSIPINHSAVILKLLEKGTLLWESRSKKLDDIKEVFVKVWGEIDDE >gi|292606569|gb|ADGG01000041.1| GENE 200 171007 - 171552 622 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|34762198|ref|ZP_00143205.1| ## NR: gi|34762198|ref|ZP_00143205.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 3 180 5 181 209 199 69.0 4e-50 MMNDVMKQFENAISPNQLRKFDFKSYEISDIDKEKVEEQEAKLLNSFRKYKNNLFEICSS LAEVEKILKASGSFMAWYESAGLTKDMVSVFLKRWNLYNYFPDYKDKIFSLSDQAIKILS HNSIGFDDVKAVLITEASKVKEIKQLLAPAREEFKNHTSEPGEQKYFNFNKIKKWKKELK N >gi|292606569|gb|ADGG01000041.1| GENE 201 171629 - 171826 203 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783272|ref|ZP_06748596.1| ## NR: gi|294783272|ref|ZP_06748596.1| F-box/LRR-repeat protein [Fusobacterium sp. 1_1_41FAA] # 1 65 1 65 65 83 100.0 3e-15 MSNENQNNLINKEDLIKKAKETIDYNNSLVDDDAAVAMLGISRIVNLKNEIEELKVFIKV LNRLA >gi|292606569|gb|ADGG01000041.1| GENE 202 171939 - 172145 253 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783273|ref|ZP_06748597.1| ## NR: gi|294783273|ref|ZP_06748597.1| hypothetical protein HMPREF0400_01261 [Fusobacterium sp. 1_1_41FAA] # 1 68 1 68 68 116 100.0 4e-25 MLEIRKIWGDTYLVNGEHLTQDFNEAVVIAYENKEKIKNFEVEYAETTFWKKIKNKLNFP FLLLESWM >gi|292606569|gb|ADGG01000041.1| GENE 203 172208 - 172789 749 193 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783275|ref|ZP_06748599.1| ## NR: gi|294783275|ref|ZP_06748599.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 193 1 193 193 362 100.0 5e-99 MRKAKKTEKREIKINEKKTIKVTKKPTDEKLESALLATIILNISRTCTNHKNVWDKELRE NDGIIPFKNYMEICKVRASADKIYEKYFEPTDDDIEDDVRGNFFYTEVMGKQAMKCLSGI NETPILTPDDVSQKLPVGFMGTLCSWARMVKDLDTAKMKGAARRLGISEKELNKIFNFSD KYMAWVYEEISFK >gi|292606569|gb|ADGG01000041.1| GENE 204 172806 - 173108 452 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783276|ref|ZP_06748600.1| ## NR: gi|294783276|ref|ZP_06748600.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 100 1 100 100 152 100.0 6e-36 MKIKVNQFYENVDCPREFICAHCGAHVYVTDTKDKRVKYCSATCEKQYWRDKSKADAAYK KRSKEKTIGMRNYSAKDMAIKLYKEKKEAEEMDWKERKDG >gi|292606569|gb|ADGG01000041.1| GENE 205 173101 - 173688 419 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783277|ref|ZP_06748601.1| ## NR: gi|294783277|ref|ZP_06748601.1| DNA double-strand break repair Rad50 ATPase [Fusobacterium sp. 1_1_41FAA] # 1 195 1 195 195 280 100.0 4e-74 MAKNKSELFEEESTNFVLSICNNNFTLKINFLEIEVKLLEIHKKYFKKKKFKNKEITQLV IYGLIKTAKEKLKFLYYWELKEKIKNLIFKAKLEIQTRIDFLDSCYEEDINEVYFEANPG LKEFDNLIKTYTELSKLKNSGIDVSKFLEDTKNQLSSYPKNFYLKSPYFCNFLTEIIIEA EEKKRRNNEKNRISK >gi|292606569|gb|ADGG01000041.1| GENE 206 173663 - 173896 271 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783278|ref|ZP_06748602.1| ## NR: gi|294783278|ref|ZP_06748602.1| hypothetical protein HMPREF0400_01266 [Fusobacterium sp. 1_1_41FAA] # 1 77 1 77 77 128 100.0 1e-28 MKKIELVNNQLNVNLKPNDKILLQTKSGIAKFEYISRKNDEYLIKRIEVERKYILYFTVS KFWFVKNGTVTYLLGDN >gi|292606569|gb|ADGG01000041.1| GENE 207 173898 - 174458 472 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783279|ref|ZP_06748603.1| ## NR: gi|294783279|ref|ZP_06748603.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 186 1 186 186 373 100.0 1e-102 MHKIVEIYRECGNFYEAVQKSGLPILVAHKILLTSGLLKIQDKIKYGGRSTRLGGEAEEY FQKLVPKAIDANKYWQKNNPVFDFCLDGLYIDVKYSSIRMRSGKKSWGFDCKNGADLIVG FLESEPGAGLKNPYIVIFHNQFVPLKGNLTITEETPRFNDFQVKKEEVKNIVEEYAELKK ILEEQK >gi|292606569|gb|ADGG01000041.1| GENE 208 174455 - 175195 890 246 aa, chain + ## HITS:1 COG:no KEGG:Swit_5209 NR:ns ## KEGG: Swit_5209 # Name: not_defined # Def: hypothetical protein # Organism: S.wittichii # Pathway: not_defined # 23 231 8 219 267 107 25.0 4e-22 MNDNLNLFSGSVSSKNIIVEASVDNIVKKIQSLVHKQNYDEIFFDWVRCMFYTYSNTCNK IGAEDREEKYKNIVKKYGKGIIDIFIDCNVDLIQLFEKNIDDYLGKIHHKLEVHNKMKGQ FFTPFHLSKLLAYTRFEELKKELDSGKSIKITDSACGSGCLILGMLAVLKEKGVNYQNKI FISCSDLDENAIQMAYVQLTLAGAKARCKNEDALTGKCFGSWDTFSYSISGDTSLEFEVD YGRYKE >gi|292606569|gb|ADGG01000041.1| GENE 209 175176 - 176216 1038 346 aa, chain + ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 56 344 42 320 321 174 34.0 2e-43 MEDIKNSIINQITFEINKNNNFSIDDIERIKNTIIIQLKDYDIVSKKYEIVVSDRTNAEL WKKFFLTKKAENLSDKSLLYYKNSLELFSLFIKKDFLKVTTDDIRLYLAVEREKNQQKAV SIDNIRRILNSFFSFLNEEEYISNNPVKKIKKVKGQKTEKTAFTQLELEKLRMACENSLE KAMMEVLISSAVRATELANIKIRDIDFEKNEIKIIRKGNKEGVAFMSTIAALAIKKYISE RGNYNTPYLWIVDGLMYKCYKNQILGSKIETEGFRRVLKSIATRAKVENVHPHRFRRTFA TMALKKGMDVEEIQQVLGHQNINTTMIYVNVDKSSVKEKYKNIVGG >gi|292606569|gb|ADGG01000041.1| GENE 210 176218 - 177216 851 332 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783282|ref|ZP_06748606.1| ## NR: gi|294783282|ref|ZP_06748606.1| hypothetical protein HMPREF0400_01270 [Fusobacterium sp. 1_1_41FAA] # 1 332 4 335 335 557 100.0 1e-157 MEAISLKNDTFLRDYIKNNLMKKHKTLGQRLQIETSDIKELQKELFCELFDNYGIYEIDK VAKEMGYPYDSIFIKKLIECDADKIIEERRDREFEEQYIIEHLKEKSSVLAKKLFLSIQE VRNVKKKFLENLILSYPLLHYSKLAEKVNCTHSKFSRICRECRINLIGDIKIARDNSVNL IELKQRIQEGFTFDKLKKYFGLGEDRLKRILEQNKLELLNQRKVLRDEDKENIVIDYNNG VSIAKIMEKYHTSESRIKKILTAKCIFDKKNYELNDAEINFLKENAPNMTLKELSMKLGR KGSTLRTILGILKIKYKARNCKGELWEWKGFN >gi|292606569|gb|ADGG01000041.1| GENE 211 177233 - 177463 375 76 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2772 NR:ns ## KEGG: CLL_A2772 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 75 1 76 77 73 57.0 3e-12 MKNTLNDLNNYLFAQIERLDEEDISEEKLHTEILRAKAIVGVATAIINNADVAIQAIKMK ESGITENMKLPKMLEV >gi|292606569|gb|ADGG01000041.1| GENE 212 177466 - 178068 460 200 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2771 NR:ns ## KEGG: CLL_A2771 # Name: not_defined # Def: phage protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 9 190 20 203 206 115 38.0 8e-25 MRRKFKTIEFEFLRSFKGTKNKNELLELFNNNFEKITLNQLEYLLHRYKIPFKKLPSYTF KKGFTPWNKGKKTGVRPPNLFKKGNVTWNTRELYSERVDRDGYTYIKLVNKKRWKLKHRW IWEQKYGEIPVDHVIIFADGNKENFDIKNLLLVSRKELAVLNKNNLIKNDVEVTNIGVTI AKVKIAIAKKINKKQVKKND >gi|292606569|gb|ADGG01000041.1| GENE 213 178061 - 178252 273 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783285|ref|ZP_06748609.1| ## NR: gi|294783285|ref|ZP_06748609.1| hypothetical protein HMPREF0400_01273 [Fusobacterium sp. 1_1_41FAA] # 1 63 1 63 63 95 100.0 9e-19 MIKYKGTMEVIQDNSKRTVKFEINTEYLMTENELEEFERDFKNDFMRTHNGNIEIINFFI GVD >gi|292606569|gb|ADGG01000041.1| GENE 214 178255 - 178644 561 129 aa, chain + ## HITS:1 COG:no KEGG:CLJ_B1799 NR:ns ## KEGG: CLJ_B1799 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_Ba4 # Pathway: not_defined # 3 129 2 126 126 63 34.0 2e-09 MNRDIKFRAWVKDRKAIFEVVLINYVSKKVTYLFERVGHLLNIRHEKFNDVELMQYSGLT DMMEKEIYEGDILFESFGERYYKVVFKNGSFRAEFEGDFEEHSFDLIDVVAQGCKIVGNI YENPELIEL >gi|292606569|gb|ADGG01000041.1| GENE 215 178657 - 178848 137 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783287|ref|ZP_06748611.1| ## NR: gi|294783287|ref|ZP_06748611.1| hypothetical protein HMPREF0400_01275 [Fusobacterium sp. 1_1_41FAA] # 1 63 2 64 64 70 100.0 4e-11 MKIYIRIIIWITMLYFGLIEILAISSCFYFKNKNLDLDSRKVTFYIFFGSVIQIIGYFLL KII >gi|292606569|gb|ADGG01000041.1| GENE 216 178858 - 179355 632 165 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783288|ref|ZP_06748612.1| ## NR: gi|294783288|ref|ZP_06748612.1| dUTP diphosphatase superfamily [Fusobacterium sp. 1_1_41FAA] # 1 165 1 165 165 282 100.0 4e-75 MEIKKPENFKDILKLQENLDNNINSVRDRTFEDIQMSLIAECVEFNEETMLSHKTWKVKP YNKEKELEELTDIYFFFAQLLNYLDDEKNKELKYVICYSFDEQYISTNEPHLLKFIHYVY TEKLAIAMDELNAITYQHNYTTQNILDCYWEKWQKNMKRIGNEWN >gi|292606569|gb|ADGG01000041.1| GENE 217 179365 - 179577 288 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783289|ref|ZP_06748613.1| ## NR: gi|294783289|ref|ZP_06748613.1| hypothetical protein HMPREF0400_01277 [Fusobacterium sp. 1_1_41FAA] # 1 70 4 73 73 112 100.0 1e-23 MTTQEMRTSLEKELEKLPFFISTKDTADFLGISKSSVLKKTETGELKSIRNGRLIKIPKE CLIEYVLNAM >gi|292606569|gb|ADGG01000041.1| GENE 218 179740 - 180876 747 378 aa, chain + ## HITS:1 COG:mlr0475 KEGG:ns NR:ns ## COG: mlr0475 COG0582 # Protein_GI_number: 13470699 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 123 361 143 373 399 94 30.0 5e-19 MKSKSSKTDNEELAEEMLKVFEEECRKFFRISEDKKVDSRKNVFTKVDQDVNLFDKEISF CNFILGYVKMRFKTIDDATYSSYLSNTKISILPYFFKENKKLKDINTFDIQKYYFHELNV RGVSANTVIHYHNLLSLTFKYAQKIGVININPMLNVEKPKKVRYIAKVYNYEQIKEMLEI LKREDKALYLGVVITSFFGLRRSELLGLKWSAINFADNTMSIIHTVTETNLNGKNVLIKK DKTKSTAGLRSFVLPGSIKEMLLELKEEQKRNKERLGKGYYKKDEEYVYVNEGGELHKPK FLTNGFRKFLAKHNLTHIRFHDLRHSCATILCESNVNVKDIQMFLGHSSAKTTMDIYVHQ MNKSNLSTVSIINEKIGI >gi|292606569|gb|ADGG01000041.1| GENE 219 181021 - 181230 372 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFMAVREGFEPSVPKRYSDLAGQCIRPLCHLTKLTNILNAGRSFLHNLPRISYNIIFVIV LSRKIIMQI >gi|292606569|gb|ADGG01000041.1| GENE 220 181214 - 181564 564 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739652|ref|ZP_04570133.1| LSU ribosomal protein L20P [Fusobacterium sp. 2_1_31] # 1 116 1 116 116 221 99 2e-56 MRVKTGIIRRKRHKRVLKAAKGFRGASGDAFKQAKQATRKAMAYSTRDRKVNKRRMRQLW ITRINSAARMNGVSYSVLINGLKKAGIELDRKVLADIALNNAAEFTKLVETAKSAL >gi|292606569|gb|ADGG01000041.1| GENE 221 181600 - 181806 359 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 68 1 68 68 142 100 1e-32 MPKMKTHRGAKKRIKVTGTGKFVIKHSGKSHILTKKDRKRKNHLKKDAVVTETYKRHMQG LLPYGEGR >gi|292606569|gb|ADGG01000041.1| GENE 222 181879 - 182370 350 163 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 1 161 1 165 166 139 43 1e-31 INEKIRGKEFRIISFDGEQLGIMSAEQALNLASSQGYDLVEIAPGANPPVCKVMDYSKYK YEQTRKLKEAKKNQKQVVVKEIKVTARIDSHDLETKLNQVTKFLEKENKVKITLVLFGRE KMHANLGVTTLDEIAEKFAETAEVEKKYADKQKHLILSPKKAK >gi|292606569|gb|ADGG01000041.1| GENE 223 182613 - 183230 607 205 aa, chain - ## HITS:1 COG:no KEGG:FN0995 NR:ns ## KEGG: FN0995 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 204 11 206 208 129 38.0 7e-29 MSQVRGFEFKKEENKLKMSIAMFIVFLLTTLILYIFGILNWSSIYVSFIALGIPIGCATF IDNMLEKSKEKQTNTEDSWSTNPDELVKTKKTRFSKFKGTESKDISKFAVVLSIIVSYVS VYISEVFIWTKAVLENYPDNTFSDVFTYLLKNILTEEWSRKYLVMYWIFMTGFIIFIAIG YFWNKRKMAKMQKKDEEQNNNIRKS >gi|292606569|gb|ADGG01000041.1| GENE 224 183246 - 184031 806 261 aa, chain - ## HITS:1 COG:no KEGG:FN0994 NR:ns ## KEGG: FN0994 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 37 260 17 240 241 287 65.0 2e-76 MENNGKPKKIVGRNFRANLLLYSCIILGCYALFNVNKFFIKDFERGYSATGMGYVLAIVV INFFLILFAFIIPYFVAKLYPKIYFYDEGFTCGKNGAFIYYEKMDYFFIPGLIKGKTFLE IRYTNNEGEWKAIPGQGYPTNGFDLFQQDFVNVNYPKAMKCLENNEKIEFLFNDPKKKIR AFGRKNYMKKKLEQAMKITVTRESITFDNEVYEWDKYKIFVNLGNIIVKEQDGTNILSLG PTALIHRPNLLEVIVSTLGKK >gi|292606569|gb|ADGG01000041.1| GENE 225 184060 - 185511 1253 483 aa, chain - ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 483 1 483 483 685 81.0 0 MNTRIISYVISNLFKLMMFLLLFPLAVSVYYQEGLKLSMAYIIPIIILGISSYFLSNKAP ENQSFFSKEGLVIVALSWLLISFFGALPFVISGNIPNMIDAFFESVSGFTTTGATILPEV ESLNKSIIFWRSFTHLVGGMGVLVLVLAILPKGNNQALHIMRAEVPGPTVGKLVAKMSYN SRILYIIYIAMTIIMIILLLAGGMSFYDACIHAFGTAGTGGFSSKNTSIGYYNSAYIDYV ISVGMLVFGLNFNLFYLLLLGNIKQIFKSEEAKYYLLIIFGITALICVNIYPTYTSISRL IRDVFFTVTSVITTTGYSTVDFNTWPTFSKTLILFLMFSGGCAGSTAGGFKVSRVVILAK KVVREFKKIGHPNKVVNINFEGKTLDKEMLDGIDSYFILYSFTILILLLITSLESDTFLT AVGSVFGTFNNIGPGLDATGPTSNFSIFSPFLKFILSLGMLLGRLEIIPLLILVSPRIYR KRD >gi|292606569|gb|ADGG01000041.1| GENE 226 185515 - 186591 848 358 aa, chain - ## HITS:1 COG:FN0992 KEGG:ns NR:ns ## COG: FN0992 COG0859 # Protein_GI_number: 19704327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 358 1 358 358 548 82.0 1e-156 MFSQNDNINILVVRFKRIGDAILSLPLCHSLKLTFPNAKLDFVLYEEASPLFEDHPYIDN VITISKKEQKNPFSYIKRIYKITRKKYDIIIDIMSTPKSELFCMFSRKTPFRIGRYKKKR GIFYNHKMKEKDSLNKVDKFLNQLLPPLEEAGFDVKRDYDFKFFAKPEEKEKYRKKMIEA GVDFSKPIIAFSIYSRVISKIYPIEKMKILVQHLIDKYSAQIIFFYSADQKDEIQKIHKE LGDNKNIFSSIETPTIKDLVPFFENCDYYIGNEGGARHLAQGVGIPSFAVFNPSAELKEW LPFPSDKNMGISPIDMLEKKGISREEYDKLSFEEKFSLIDVETLIEMSDKLIEKNKRK >gi|292606569|gb|ADGG01000041.1| GENE 227 186593 - 187375 907 260 aa, chain - ## HITS:1 COG:FN0991 KEGG:ns NR:ns ## COG: FN0991 COG1183 # Protein_GI_number: 19704326 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Fusobacterium nucleatum # 1 259 1 261 261 388 81.0 1e-108 MVKKKYIAPNLITAGNMFLGYLSITESIKGNYTMAILFILLAMVCDGLDGKTARKLDAFS EFGKEFDSFCDAVSFGLAPSMLIYSILVTRVPGSPFVVPVSFLYALCGVMRLVKFNIINV ASSEKGDFSGMPIPNAAAMVVSYIMFCEVIYKTFGVQLFHINIFIAISVISASLMVSTIP FRTPDKTFAFIPKKLAVVLILALLASMYWTLDYSVFIISYTYVILNLLAYFYKRFGNAGD NDTSVEEYVEVEEDTNEREG >gi|292606569|gb|ADGG01000041.1| GENE 228 187540 - 189474 1971 644 aa, chain + ## HITS:1 COG:FN0799 KEGG:ns NR:ns ## COG: FN0799 COG1523 # Protein_GI_number: 19704134 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Fusobacterium nucleatum # 1 644 1 645 645 1094 81.0 0 MYYNYNQYVNLGAFLDKNACTFAIYAKNVSSLILNIFHSSEDVIPYMQYKLSPVEHKLGD IWSISLENIQEGTLYTWEINGFSVLDPYALAYTGNENVKNKKSIVVKRVGTETKHILIPK KDMLIYESHIGLFTKSTNSQTTTKGTYSAFEEKIDYLKELGINVVEFLPVFEWDDCTGNL NREVGLLKNVWGYNPINFFSLTKKYSSSTDINSFDEIKEFKELVSKLHQNGMEVILDVVY NHTAEGGTGGEEYNFKIMAEDVFYTKDREGNFTNYSGCGNTLNCNHKVVKDMIIQSLLYW YLEVGVDGFRFDLAPILGRDADSQWTRYSLLYELVEHPILSHAKLIAESWDLGGYFVGAM PSGWSEWNGAYRDTVRCFIRGDFGQVPELIKKIFGSVDIFHSNKSGYQASINFICCHDGF TMWDLVSYNIKHNLLNGENNQDGENNNHSYNHGEEGLTENPKIIALRKQQIKNMLLILYI SQGIPMLLMGDEMGRTQLGNNNAYCQDNVTTWVDWNRKKEFEDIFLFTKNMINLRKKYSI FRKESPLTEEEITLHGIELFKPDLTFHSLSIAFQLKDIETNTNFYIALNSYSEQLCFELP KLENKSWHVLADTAKTETCSFEEIKYERNHYCVLPKSAIILISK >gi|292606569|gb|ADGG01000041.1| GENE 229 189607 - 191544 1977 645 aa, chain - ## HITS:1 COG:FN0798 KEGG:ns NR:ns ## COG: FN0798 COG3855 # Protein_GI_number: 19704133 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 645 1 645 645 1206 94.0 0 MNTEIKYLELLSKTFKNIAETSTEIINLQAIMNLPKGTEHFMTDIHGEYEAFNHVLRNGS GTIRNKIEEVYKDKLTESEKKELAAIIYYPKEKIEIMQNTANFNVDRWMINIIYRLIEVC KIVCSKYTRSKVRKAMPKDFQYILQELLYEKKELANKREYFDSIVDTIISIDRGKEFIIA ISNLIQKLNIDHLHIVGDIYDRGPFPHLIMDTLAEYNNLDIQWGNHDILWIGAALGNKAC IANVIRICCRYNNNDILEEAYGINLLPFATFAMKYYGNDPCKRFRPKEGVDSDLIAQMHK AMSIIQFKVEGLYSERNPELEMSSRESLKFINYEKGTITLDGVEYPLNDTNFPTVNPENP LELLDEEAELLDKLQALFLGSEKLQKHMQLLFSKGGMYLKYNSNLLFHACIPMEPNGEFS EMYVVDGYYKGKALLDKIDNVVRQAYYDRKNVEVNKKHRDLIWYLWAGRLSPLFGKDVMK TFERYFIDDKSTHKEIKNPYHKLINDEKICDKIFEEFGLNPRTSHIINGHIPVKVKEGES PIKANGKLLIIDGGFSRAYQSTTGIAGYTLTYNSYGIKLASHLKFISKEAAIKDGTDMVS SHIIVETKSKRMKVKDTDIGKSIQSQINDLKKLLKAYRIGLIKSN >gi|292606569|gb|ADGG01000041.1| GENE 230 191769 - 194318 3773 849 aa, chain - ## HITS:1 COG:FN0796 KEGG:ns NR:ns ## COG: FN0796 COG0574 # Protein_GI_number: 19704131 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Fusobacterium nucleatum # 1 848 1 848 851 1542 90.0 0 MKQVYEFRDGGKEMMALLGGKGANLAEMAKIDLPIPKGIIISTTACNEYFKNDKKLSPVL EEEILRNIRVLEYETGKKFQSPKPLLVSVRSGAPVSMPGMMDTILNLGFNDYVAEKMLEI TKDEKFVYTSYLRFVQMFSEIAKGIDRRKFVHLKATNYKAQILESKKIYRDECGEIFPEN YRDQILIAVKSIFDSWNNDRAILYRKLHNIDNNMGTAVVIQEMVFGNFNEKSGTGVLFTR NPSTGEDKIFGEVLLNAQGEDIVAGIRTPDNIELLQNSMPDIYNQLVETAKKLEKHNRDM QDIEFTIENSKLFILQTRNGKRTAEASLKIAMDLVKEGIITKEEAVMKVEPASINKLLNG DFEEKYLKEATLLTKGLAASSGVAVGRIMFDAKRVKIREKTILVREETSPEDLQGMALAQ GIVTLKGGATSHGAVVARGMGKCCVTGCSEIKLDEINKTMTIGEHVLKEGDFISVSGHTG EIFLGKIPLKENSFSDELKEFVSWASEVKRMNVRMNADTVEDVEQGKSFGAKGIGLCRTE HMFFKNDKIWTIREFILSDRGEEKERALKKLHNLQKEDFLNIFEVLDGDEANIRLLDPPV HEFLPKTTDDKKKMAEILLISLEEIEKRIYKLKDENPMLGHRGCRLGVSYPELYRIQARA IIEAAYECEKKGIKVHPEIMIPFIMEAKELAFLRKEIEEEIEDLFKELGARVEYKLGTMI EIPRACLLADEIAEYADFFSFGTNDLTQMSMGLSRDDSVKFLDDYREKGIWEGEPFYSID RKAVSQLVELGVKNGKSRKTNLKIGVCGEHGGDPKSIEFFEEQNLDYISCSPFRVPTAIL AAAQAYLKK >gi|292606569|gb|ADGG01000041.1| GENE 231 194330 - 194929 579 199 aa, chain - ## HITS:1 COG:FN0795 KEGG:ns NR:ns ## COG: FN0795 COG0517 # Protein_GI_number: 19704130 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Fusobacterium nucleatum # 1 199 1 198 198 309 89.0 2e-84 MILTERQKKILKMLKEKSLLSGDEIAKNLNVTKSALRTDFSILTALKLVTSKQNKGYSYN NKCTIIRVKDCMSPQNSIDVKTSVYDAIIHLFNYDLGTLVVVENEKLVGIISRKDLLKAT LNKKNIEKTPVSMIMTRMPNIVHCFEDDNIMEAIEKLIKHEIDSLPVLRKENGKLSLVGR FTKTNVTKLFYQELKNKSI >gi|292606569|gb|ADGG01000041.1| GENE 232 195163 - 195576 652 137 aa, chain + ## HITS:1 COG:no KEGG:FN0794 NR:ns ## KEGG: FN0794 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 137 1 137 137 212 86.0 3e-54 MKLSINIKGLSRKKVIHQEEIEILNEISTAKDLIKELVTINVEKFNKKIDDKDILSIMTN EYIAEAARSGKIGDEVHGDKKANLEKALDTAYLAFEDGLYCIFVNDEQTEKLDDSLNLKD GDVLTFIKLTMLAGRMW >gi|292606569|gb|ADGG01000041.1| GENE 233 195585 - 196973 1331 462 aa, chain + ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 460 531 1027 1607 218 35.0 4e-55 MLSFSDYKFELAYKIKEVNQLSKNITKDENNIFIIEKTIDAKNIFSKTADELFELAKKLD ILITENADYEYINIYTNQKEVLKTGFFPMLNMKNHSSDVDKLEEYPLAELWKEFYENEIK DFSTLYQLHLLYQPYRKTGKFSDVINDILGIAPTTIINNIAQLFETTSSKNPRANIMAKI IDLLYMEYEGKNKEYVFETAKAFAIALLDRKTEDLVEKLSKPSFHYDKKIEYTTLFSIPS KVTFNYLSNYYNEKTFIESFILKLAIENKLSNYKHGEVFYSLIEIANSIELGLAPKELLI KNILSTSIENILDNLKIFYHLISGKKHDFYNDVDKMRETWNYDKAIKVLEKCVLEAVNSI VDSELKSEDSKTKYSKLITYIEKIEGIDYLIKILQALDNKKIARNKKETLNYLLKICYPS KEDNLKTFKEKIKNIDISKERLVEVAIYSPQWKKFIDDFLML >gi|292606569|gb|ADGG01000041.1| GENE 234 197009 - 202069 5759 1686 aa, chain + ## HITS:1 COG:no KEGG:FN0033 NR:ns ## KEGG: FN0033 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 111 1685 1 1606 1607 1499 54.0 0 MLNFYGNKFTSDINHFIKKAKDRVRAFDRDNQRFIEDIFTKRNYRGYGEILQENLINKFS RRENVKFEDIFPENIHPALEILIGESNLKNFIKIGEKITKTPYTMGYTRRMVRSSNCRNY IDKLFSVLSTFVHYKFFDINTKKLLLGNCNFKGLEGWDLKNLITSLENKYIIANDIDNGN QDVIDFINEALTSGSSKNINYGTLAAIFVSENKSLVEMAGKLLLAAQRQEGLRQQICETM DEGSQENFEYMFKIIYDNDLIRFSSVKRALGVWTGLLGENYNNPETVGKKELEIINKLID NPKYADELLKSDDNVEVYLALWYKASQDVKIALEAIQELLKVSKLHTKLLVAYNLDIFQD IKYQRTVTKDIIKEYSEKDDNDFLKIVACYWEHLSYNAYTNTSIKTNRGLFDTTDEAKEF FEIFKKVFALIDGKDKAFNPIIFPWVSRYIYKHNIASILFTIAISYPELNLKNEVLTYFK ALDTYSRGGYLKSMFYKPENEDEELFVVKMLADASVTNEVNKIIRANNLASKYSKEIEDT LRLKTADVRKNAIALILSLESSQLLEATESLVQDKNENKRLAGLDILTKIKDKQDFAKEK IEKIVATIKEPTDPEKILIDGLVGKVETTESSNLYDKTYKFELPYEVKEVKKLSKNVKKN KDGVYIIEKTIDAKDIFTKTEDELFELVKKFNALIVNNGTYEYTNGYTGEKILLRDNFLP IVKRANYYYSVDEHLDEYPLADTWREFYKNEIKDFSTLYQLYLLTQSHLRIENFNNVINK ILNTTPGIILNKIIHHFKTFSDNEIMEKIVYLLYKEYKEENKEYLFETSKAFFIELLKEN SANLIHRRNKNHNYNSIFDLEYSIPTVVFKNLSEYWDERTFTENLILKLNFEKKVSSYKT RENFYSLIDIANAVELGLIEKDLLIKSIFSEDIDKMDTNFRNLYNFLGIKNPNNYYYYNN YDDNEKIKNSWNYENAIKVLKKYGLEVVNYVVDNELKRGDSKTKYSKLITSINRIEGVDY LIKILQALGNEKLVRSDYWYGDNTSKKEVLSHLLKVCFPSEKDDLKTFKEKIKKTNITEE RLVEVAMYASQWIELIDKFLKWKGFTSGCYYFQAHMSDVSKDKEGIIAKYSPISIEDFQA GAFDIDWFKDAYKQLGKEHFDILYESAKYITDGTKHSRARKFADAVLGNMKIKDVEKEIS AKRNKDLVASYSLIPLAKNKIKDAVNRYKFLQNFLKESKQFGAQRRASEAKAFEISLENL SRNMGYSDVTRLTWAMESEMMAEMKKYFEPKKIQDYSVYIEIDELGQSSIKYEKDGKVLK SLPTKIKNEKYIEEIKEVHKNLKEQYSRSRKMLEQSMEDGIKFYAYEIKTLSTNPVVAPL IKDLVFKVDDILGYYVDNQLIGFDKKAKKVTLIEDIDKDTLLSIAHPFDLFNSKQWPLYQ QDILEREVKQVFKQVFRELYIKTKDELKMDKSRRYAGHQIQPTKSVALLKTRRWVVDDYE GLQKVYYKENIIAKMYAMTDWYSPAEVEAPTIEDIVFYDRKTFELMTIEDVPDLIFSEVM RDIDLVVSVAHVGDVDPEASQSTIEMRRAIVEFNAKLFKLKNVTFTESHALIKGTRAEYS IHLGSGVIHQKAGATIEVLPIHSQHRGRIFLPFIDEDPKTAEIMAKVLLFAQDEKIKDIF ILDQIL >gi|292606569|gb|ADGG01000041.1| GENE 235 202175 - 203323 1586 382 aa, chain - ## HITS:1 COG:CAC0390 KEGG:ns NR:ns ## COG: CAC0390 COG0626 # Protein_GI_number: 15893681 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 3 380 7 382 384 451 56.0 1e-126 MNKNVGTVCVHGKKQRRNVDNTGAVSFPIYQSATFVHPAFGESTGFDYSRLQNPTREELE RVVNDLEEGVDALAFSTGMAAVTALLDILEPGDHIVATDDLYGGTIRLMESICKKNGIKT TFVETDKVENVEKAIEKNTKMIYIETPTNPMMKIADIEEISKIAKKNNCILVVDNTFLTP YFQKPLKLGADVVLHSATKYLAGHNDTLAGFLVTNSQEISEKLRFITKTIGACLSPFDSW LVLRGIKTLHIRMEQHQKNAKKIVEWLKTQKAVVSVYYPGLEENESIEVSKKQGTGFGGM VSFHVDTPERAKKILKDIKLIQFAESLGGVESLITYPMFQTHADVPLEERLARGINECLL RMSVGIEDVNDLIEDLDQAINK >gi|292606569|gb|ADGG01000041.1| GENE 236 203385 - 204782 1213 465 aa, chain - ## HITS:1 COG:no KEGG:FN0687 NR:ns ## KEGG: FN0687 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 463 1 465 467 536 66.0 1e-151 MYVAITGKGKAKVIQFCEQHRIPKTNKKKTVVIKTIGNYEKLLKENPNIIEELKEEAKRL TIEKKEKVLKTNLFRFGHSLVNALWKELSLDEILGENLSKSLFALVIYRLGSSYSTFLEN RKTPFISLNSLSHSEFYDVLLQLDKKTKDLIKCFNKFFDKKIKRDKNIIYYHRGNYIYNS YWKVLYGLESNNFQKGEKDLPFNMNLFFDSYGIPISYHLSLKEDNSKNKLEDFKKNFKNS KLILVLTKESEIQEKGSISSISFEDLSEDIQNEILKDNKWKILERDIKTNEILEKEKILD IKDSKLYVYWNKKRAYKDYLENNLKNGYICLKTDENLEDYEISNIFQHSWNIEDKFKITD VDFSKRHIQGHFTLCFICLCIIRYFQYLLGDNGKVFIPMIYANKAISNPMIFMKKVGNDS SLYPIHLTNSYIKLSKILGLDELNEEINLEKFQDKIKMELEKLNN >gi|292606569|gb|ADGG01000041.1| GENE 237 204836 - 206248 1553 470 aa, chain - ## HITS:1 COG:FN1985 KEGG:ns NR:ns ## COG: FN1985 COG4452 # Protein_GI_number: 19705281 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Fusobacterium nucleatum # 19 467 1 453 454 661 74.0 0 MDNNSYKIPSNKKPFSPVMKKLIFLVVFVIILQIPLIFVGNLIDNRGRLFNQTVTEIGNE WGKSQKIIAPVISLSYKDSTLSKDDSIRNEKNVVVQPVERRIAILPEELNATIEMKDELR HRGIYNATVYTANIKLTGYFSLKDFPDKNDMIAYLSIGLSDTKALVKVNKFKLGNVEQDL ETMSGTMASPLFANGISGKIGPEYDGMMKEDKIPFEIDIDFRGSREISILPLGKKNNFDI KSNWKSPSFSGVLPVERNIDDNGFTAKWEVSNLIRNYPQVLDINEDKYSDFLDYENTYEA YGDYNSDGNSIVKVLLYNSVTDYTQIYRACNYGFLFILMSLVIVYIFEIVSKKVAHYVQY IVVGFSLVMFYLLLLSLSEHLGFEMAYLVASLAIVIPNSLYVASMTDNKKFGIGMFIFLS GIYAILFSILRMEQYALLTGTLLILAVLYVVMYLTKKADIFFKLEEENNQ >gi|292606569|gb|ADGG01000041.1| GENE 238 206309 - 207742 1629 477 aa, chain - ## HITS:1 COG:FN1985 KEGG:ns NR:ns ## COG: FN1985 COG4452 # Protein_GI_number: 19705281 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Fusobacterium nucleatum # 19 475 1 453 454 636 71.0 0 MDNNLYKIPSNKKPFSPVMKKLIFLVVFVIILQIPLLFVGKLVERRGRLFKETVKEIGNE WGKSQKIIAPVISLSYTDSSLSKDDSIRNEKNVVVQAVQRRLAILPEELNATIEMKDELR HRGIYNATVYTANIKLTGYFSPKDFPDKNDMIGYLSIGLSDTKALVKVNKFKLGNVEKDL EAMSGTMANPLFTSGISGNIGPEYDGMMKEDKIPFEIDIDIRGSRKISILPLGKKNNFDI KSNWKSPSFSGVLPTERNIDDNGFTAKWEISNLIRDYPQVLDINQDVYDDFKDSYSEADL EVYRDSEEYKYYNSDDSKIVKVLLYNSVTDYTQIYRACNYGFLFILMSLVIVYIFEIVSK KVAHYVQYIVVGFSLVMFYLLLLSLSEHLGFEMAYLVASLAIVIPNSLYIASMTDNKKFG IGMFIFLSGIYAILFSILRMEQYALLTGTLLILAVLYVVMYLTKKADIFFKLEEENN >gi|292606569|gb|ADGG01000041.1| GENE 239 207862 - 209034 1436 390 aa, chain + ## HITS:1 COG:no KEGG:FN1986 NR:ns ## KEGG: FN1986 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 55 390 1 336 336 412 69.0 1e-113 MKKILLLCLFSILSIFSFANDWEFGSEGEHIIPLKGSAVAIKKEKITLKLTEDGMLVNVK FTFDSPNAENKIIGFVTPESGNNEDYEENYSKVKRKAEPLKIKNFKTVVNGKEVKSNVEL LSKLLSRGVLDNNVIKEYVEEEKNFYNYVYYFNADFKQGENVVEHSYYYTGSYGIFERDF AYVVTTIAKWKNKTVEDFEIEVIPGKYFVKLPYTFWKNGKKIDWQIAGKGKMVSIAPTNP NSDDSYGIDKYGAVYLNLDNGSVKYNTKNFSPDTDFYMVRIDNIPGFDFEFPAGKVQGYR FKEGDYKFSDSFNNLLNSDDNDLKNLSDLQLDILRNYPYAIAGYDFARKDLKDYFSEFIW YRPTSKNVKINPIYNDLIKSIDKIKASRKK >gi|292606569|gb|ADGG01000041.1| GENE 240 209351 - 209914 876 187 aa, chain - ## HITS:1 COG:FN2001 KEGG:ns NR:ns ## COG: FN2001 COG4929 # Protein_GI_number: 19705297 # Func_class: S Function unknown # Function: Uncharacterized membrane-anchored protein # Organism: Fusobacterium nucleatum # 1 187 1 186 186 223 74.0 2e-58 MSNKMKKILIVVNIVLLFVITGFSAQKEESYKKLDSYFYLELRPVDPRSLLQGDYMTLNY DILDQTTEFIYQNKSYDYYEEERKEETKEQKEKRELAEAKKAYIAIRLDGNKVAKFVKLT KEKTDEKDLLFVAYKSDGYNVDINANSYLFQEGTGDKYENARYAKVVLVDNKLRLIDLRD KDFKEIK >gi|292606569|gb|ADGG01000041.1| GENE 241 209907 - 211712 1513 601 aa, chain - ## HITS:1 COG:FN2002 KEGG:ns NR:ns ## COG: FN2002 COG4984 # Protein_GI_number: 19705298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 32 601 1 570 570 509 64.0 1e-144 MFEKIKKFFLYFSVIFLIAGVTSFTAYNWATMSSIEKLAVPSALIIAGLGVYLFLKNDIY KNLALFFSSFTIGTLFAVYGQVYQTGADTWILFRNWAIFLIIPIIATGYYSIVTLFTIVV AVGTSFYLELYLSGSIIPFLSSLIFGIVLLVYPFIQKRFNFKFNNIFYNIMTGIFYISFI ASGFAAINDHHNGLTAIVLYLLFVAAVYFVGYKQLKKITIKILSITSLGVFGVAIIIKMV SSIIYTDTTVYIFFSLMVIIGTIVAVVKSSNEIESENIKKFTNVVVGFLKVLAFFLLMIF VFSLLGLMGLGEEAFIVVAILLIIFSYFAAKMLGLKNDKIEIVAFIAGLICLGIYLSVSL EMSSLSVISIITIIFNLFWFFMPTRALDLLLFPVNYCLLGFFLMKKAPSINYHYSIITIA LIVEAYFYFLYDKKELLNEKLKRVLIGNEATLILLPLGWLSTRIGIFVDDYELMFKYVKY YRIVNIALTVLIGAFVIFKTIKNQKLQIVLCILWLGLNYFAYSEILSLIFVMLIMLIYAS KNSKWGILVPTLAACYVIYTYYFITYRSLLDKSIALSITGGLLLIAYLVLKYGFKGVENN E >gi|292606569|gb|ADGG01000041.1| GENE 242 212125 - 212673 170 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 2 180 4 182 190 70 28 8e-11 MKIKNMLYAAMFAAIVAVLGLMPPIPLPFIPVPITLQTMGVMLAGSFLGKRLGFISMLLV VVIVLLGLPILSGGRGGLAVLTGPTGGFFIVWPFAAFLVGFLTEKFWKNINIGKYIVANI IGGIVLVYLVGAIYLSYITKMPIDKAFLATMAFIPGDVLKAVVVSVLCYKLKEISPINEV VR >gi|292606569|gb|ADGG01000041.1| GENE 243 212683 - 213471 676 262 aa, chain + ## HITS:1 COG:FN2004 KEGG:ns NR:ns ## COG: FN2004 COG1122 # Protein_GI_number: 19705300 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 261 1 263 264 385 82.0 1e-107 MIEVENLSFSYQNNKVLKNISFSIEKGEYLCIIGKNGSGKSTLAKLLAALIFQQEGTIKI SGYDTKNQKDLLNIRKIVGIIFQNPEEQIISTTVFDEVIFALENLAISREDIKEIAEKAL KNLNLLEYKDRLTYQLSGGEKQRLAIASILAMGTEILIFDEATSMLDPVGKKEVLRIMKE LNSQGKTIIHITHDRDDILEASKVMLLSEGEIKYLGSPYKVFDDDIAFLLKIKNILEKHN IKVENKNINMEDLVKIVYENIY >gi|292606569|gb|ADGG01000041.1| GENE 244 213455 - 214273 284 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 4 243 131 375 398 114 28 5e-24 MKISIKNLSYSYSVFNDEKNAIKDINLEINSNKRIAIVGHTGSGKSTLLKLIKGLLKHQT GEIHIDGKLEDIGYIFQYPEHQIFEATIFKDIAFGLKKLKLSEKDLTERVEKALQLVGLG KDYLHRSTLNLSGGEKRKVALAGVFIMENQLLLLDEATVGLDPESKNELFKILLNWQKEN NSGFIFSSHDMNDVLNYAEEVIVMSEGKVLYHTKPSELFEKYSDSLESLGLVLPKSIDFL NRLNKNLKNPLTFENEISEEDILKAIEERLAK >gi|292606569|gb|ADGG01000041.1| GENE 245 214285 - 215073 344 262 aa, chain + ## HITS:1 COG:FN2006 KEGG:ns NR:ns ## COG: FN2006 COG0619 # Protein_GI_number: 19705302 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Fusobacterium nucleatum # 1 247 1 247 266 311 76.0 1e-84 MNIILGEYINRDSVLHHLDPRTKLIGSFSLILSFLFANNLSIYLIYSVLALILIFLSKIP LTAFLKSLKYLSYILIFSAFFHIFSKQEGELLFKVWKYSVYDSGVFSAVKMMGRIILVLI FSSLLTLTTKPLDIALALETLLSPLKKIGLPIQDFSIMLSITLRFIPTILQEFNTIKMAQ QARGGNFETRNPFKKLSQYSLILLPLLMSVIKKVDNLTLAMEARAFHCGLERTNFHRLKF QKIDYLAFIILFSIIIFLFFYQ >gi|292606569|gb|ADGG01000041.1| GENE 246 215056 - 215997 1572 313 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739628|ref|ZP_04570109.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 2_1_31] # 1 313 1 313 313 610 98 1e-173 MKMKVLEAKVIYESDNIEKYKKIISDIFYNFGVTGLKIEEPLLNKDPLNFYKDEKQFLLS ENSVSAYFPLNIYSEKRKKVLEETFKEKFSEDEEIVYNLDFYEYDEEDYQNSWKKYLFVE KVSEKFVVKPTWREYEKQDDELVIELDPGRAFGTGSHPTTSLLLKLMEEQDFTNKTIIDI GTGSGILMIAGKLLGAGEVYGTDIDEFSMEVAKENLLLNNISLDEVKLLKGNLLEVIENK KFDIVVCNILADVLIKLLDEIKYILKEDSIVLFSGIIEDKLAEVISKAESVGLEVAEIKE DKEWRSCRLLVKK >gi|292606569|gb|ADGG01000041.1| GENE 247 215972 - 216763 1093 263 aa, chain - ## HITS:1 COG:FN1609 KEGG:ns NR:ns ## COG: FN1609 COG1692 # Protein_GI_number: 19704930 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 263 1 263 263 460 86.0 1e-129 MKVLIVGDVVGRPGRNTLQAFLEKYKEDYDFVIVNGENSAAGFGITVKIADEFLSWGTDV ISGGNHSWDKKEIYEYLDNSYRMVRPANYPSEVPGRGYTILEDKNGNKIALISLQGRVFM SAVDCPFRTAKKLIEEILKTTKNIIIDIHAEATSEKIALGKYLDGEVSLVYGTHTHVQTA DERILANGSGYISDIGMTGSQNGVIGTNAETIIKKFLTSLPQKFEVAEGEEQLSGIEVEI DEKTGKCKKIKRINWSENEGFRS >gi|292606569|gb|ADGG01000041.1| GENE 248 216789 - 218426 1564 545 aa, chain - ## HITS:1 COG:no KEGG:FN1654 NR:ns ## KEGG: FN1654 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 543 28 570 571 800 80.0 0 MKKGIGLGIDDFRKIIKEDCYYFDKTNWIEELLKDRTQIKLFTRPRRFGKTLNMSTLKYF FDVKNAEENRKLFKDLYIEKSEYFKEQGQYPVIFISLKDLKKNTWEECFFEIKELLRNLY NDFYHIRESLNESDLREFDKIWLKEKEANYDSSLLNLTKYLYDYYKKEVILLIDEYDSPL IVANQRNYYKDSINFFRNFFSIALKTNPYLKIAVLTGIVQVAKEGIFSGLNNVITYNILE NRFETFFGLNEEEVEVALKYFELEYEIEEVKKWYDGYKFGEKEIYNPWSILNYLRTKELR AYWVNTSDNALIYENLSVANMDVFNSLEKLFEGKEIKKEISPFFTFEELERYNGIWQLMV YNGYLKLNQKLEDDEYLLTIPNYEIQTFFKKGFIDKYLIGSNYFNPIMRTLLEGNIEEFG RMLEEIFLINTSFHDLKEESVYHTFLLGMLIWLRDKYEVKSNGERGQGRYDILLLPLDKK KPAFVFEFKVSKTIKGLESKAEEALNQIKEKQYDVGIKESGIDKIYRIGLAFKGKKVKIK YELND >gi|292606569|gb|ADGG01000041.1| GENE 249 218558 - 219586 1058 342 aa, chain + ## HITS:1 COG:FN0819 KEGG:ns NR:ns ## COG: FN0819 COG0457 # Protein_GI_number: 19704154 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 340 1 342 665 327 54.0 2e-89 MKDDLIKLLNELEKERDYHKIITTIEALSDEDKNSKIKLSLAKAYSHIDEFDKTIEILES IKDSESNTSIWNYCMGHSYYYLDNPSEAERYLLKALEINPEDKPSNFLLALLYHELGDIE EPEEAIHYLNKSLDYFNTYSKLNAEEDITEDLISIEQKLAWNYDKLRKHKEAEIHLRKAI SLGDNEEWVYSQLAYNLRSQERYEEALENYQKVIELGRKDTWLYSEIAWTYFLIKKPQLA LDYMKKAKELSPVEVDLALITRTASILLALAEHKKAIKMIEEVISKEEYKNDINLLSNLA YIYIDMKDYNSALTYLQRLKELGRNDEWLNKNLILVYSKLEK >gi|292606569|gb|ADGG01000041.1| GENE 250 219743 - 220765 1151 340 aa, chain + ## HITS:1 COG:FN0113 KEGG:ns NR:ns ## COG: FN0113 COG1420 # Protein_GI_number: 19703461 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Fusobacterium nucleatum # 1 340 12 351 351 535 90.0 1e-152 MRISEREKLVLNAIVDYYLTVGDTIGSRTLVKKYGIELSSATIRNVMADLEDMGFIEKTH TSSGRIPTDMGYKYYLTELLKVEKITQEEIENISNVYNRRVDELENILKQTSTLLSKLTN YAGIAVEPKPDNTKVDRVELVYIDEYLIMVVIVMEDRRVKTKNIHLPYPITKDEVDKKVV ELNDKIKNNEIAINDIEKFFTESSDIIYEHDDEDELSKYFINNLPGVLKDRDIEEVTDVI EFFNERKDIRDLFEKLIEQKAKENSKTNVNVILGDELGIKELEDFSFVYSIYNLGGAQGI IGVMGPKRMAYSKTMGLINHVSREVNKVINSMEREKNKKV >gi|292606569|gb|ADGG01000041.1| GENE 251 220776 - 221378 954 200 aa, chain + ## HITS:1 COG:FN0114 KEGG:ns NR:ns ## COG: FN0114 COG0576 # Protein_GI_number: 19703462 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Fusobacterium nucleatum # 1 200 1 199 199 216 77.0 2e-56 MQDKDIKDEVLEEDINKEEVKTDDVKEEAHEHEHEHKHGGHTCCGKHGHKHEEETKKLKA EIETLKNDYLRKQAEFQNFTKRKMNEVEELKKFASEKIITQFLGSLDNFERAIEASNESK DFNSLLEGVEMIVRNLKDIMTGEGVEEISTEGAFNPEYHHAVGVEASEDKNEDEIVKVLQ KGYTMKGKVIRPAMVTVCKK >gi|292606569|gb|ADGG01000041.1| GENE 252 221415 - 223238 2660 607 aa, chain + ## HITS:1 COG:FN0116 KEGG:ns NR:ns ## COG: FN0116 COG0443 # Protein_GI_number: 19703464 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Fusobacterium nucleatum # 1 607 1 607 607 967 93.0 0 MAKIIGIDLGTTNSCVAIMEGGSATIIPNSEGARTTPSVVNIKDNGEVVVGEIAKRQAVT NPTSTVSSIKTHMGSDYKVEISGKKYTPQEISAKILQKLKKDAEAYLGEEVKEAVITVPA YFTDSQRQATKDAGTIAGLDVKRIINEPTAAALAYGLEKKKEEKVLVFDLGGGTFDVSVL EISDGVIEVISTAGNNHLGGDNFDDEIIKWLVAEFKKENGIDLSNDKMAYQRLKDAAEKA KKELSTLMETSISLPFITMDATGPKHLEMKLTRAKFNDLTRHLVEATQGPTKTALQDANL NANQIDEILLVGGSTRIPAVQEWVENFFGKKPNKGINPDEVVAAGAAIQGGVLMGDVKDI LLLDVTPLSLGIETAGGVFTKMIEKNTTIPVKKSQVYSTYADNQTAVTINVLQGERARAS DNHSLGNFNLEGIPAAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKENNVTISGSSNLSK SDIERMTKEAEANAEEDKKFQELVEARNKADQLISATEKTLKENPDKVSEGDKKNIEDAI EELKKAKDGDDRGAIDAAIEKLSQTSHKFAEDLYREAQAQAQAQQQAGANTGSDNKADDV AEAEVVD >gi|292606569|gb|ADGG01000041.1| GENE 253 223256 - 223669 438 137 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDRKNIFVDIKANSKEEYRETLIDLFKAEKAGERFNYFVESTTFGKIYLEHPSPLNKGFD FKVCIEEKIFPNNRLKNSPKHDDLINDLNLKREYNKEKYDELIKPLVNNIYKCNPVSFLD NYDFLGLPVDVCIKLLK >gi|292606569|gb|ADGG01000041.1| GENE 254 223835 - 224350 579 171 aa, chain + ## HITS:1 COG:FN0117 KEGG:ns NR:ns ## COG: FN0117 COG0350 # Protein_GI_number: 19703465 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Fusobacterium nucleatum # 2 171 1 170 170 239 82.0 2e-63 MVRNIKGISFLYNKKIGYLEIIEEKDGISEISFLGNMKIEERKKLYNISTESPLTKKCSK QLEEYFSGKRKEFNIKLDVIGTEFQKECWNSLLKIPYGETISYSDEAKIIGKDKAVRAVG SANGKNSIPIIIPCHRVVSKDGSLGGYSGGEGGNKGIEIKKYLLELEKNFK >gi|292606569|gb|ADGG01000041.1| GENE 255 224400 - 225578 2151 392 aa, chain + ## HITS:1 COG:FN0118 KEGG:ns NR:ns ## COG: FN0118 COG0484 # Protein_GI_number: 19703466 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Fusobacterium nucleatum # 1 392 1 392 392 568 91.0 1e-162 MTKRDYYEVLGVDKGASEGDIKKAYRKAAMKYHPDKFANASDIEKKDAEEKFKEINEAYQ ILSDSEKRQQYDQFGHAAFEGGAGFGSGGFNANGFDFGDIFGDIFGGGGFGGFEGFSGFG GSSRRSYAEPGHDLRYNLEITLEEAAKGVEKTIKYKRTGQCEHCHGTGGEDSKMKTCPTC NGQGTVRTQQRTMFGMMQSQTVCPDCRGKGEVPEKKCKHCHGTGTAKETVEKKVNVPAGI DDGQKLKYAGLGEASQSGGPNGDLYIVIRIKSHDIFMRDGENLYCEVPISYSTAVLGGEV EIPTLNGKKTIKVPEGTESGRLLKVKGEGIKSLRGYGQGDIIVKITIETPKKLTDKQKEL LQKFEESLNEKNYEQKSGFMKKVKKFFKDIIE >gi|292606569|gb|ADGG01000041.1| GENE 256 225730 - 226119 533 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783326|ref|ZP_06748650.1| ## NR: gi|294783326|ref|ZP_06748650.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 129 1 129 129 182 100.0 8e-45 MESKEKELYLKMLRVEDDLESMDSELFFLIEKYPQDMNLKNLKNQNKIFYESSILKKFKK IYFDKLRNTFSLAEFENILEESDIELEKIKKWLKDVAKEYLKNNFKQEELRNYWFGSYED MPVIIESGE >gi|292606569|gb|ADGG01000041.1| GENE 257 226186 - 227730 1926 514 aa, chain - ## HITS:1 COG:FN0701_1 KEGG:ns NR:ns ## COG: FN0701_1 COG0500 # Protein_GI_number: 19704036 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 3 246 5 248 248 292 56.0 1e-78 MDQNTDKTKKLESSYDENPYISKTYYHTQPEKLKSNLRLLDFISPDLKNAKVLEIGCSFG GNIIPFAMENPEATVVGVDLSKVQVDEGNKIIEFLGLKNIKIHHKNILDYNEHFEQFDYI ICHGVFSWVDENVQKGILKFIKKHLTKNGLAMISYNTYPGWKSLEVSKDAMKFRNKMLAK QDKDVTGKNQIAYGKGILEFLDEYSGLNKRIKDNFTYVGQKNDYYLLHEYFEVYNTPFYI YDFNELLETEGLAHVVDSYLQKSFPFLPNEILDKIENDCQSDYIGKEQYYDYLTDCQFRS SIITHKDNIKDINISRNIKIESIKALNYRGFYVKNEEGKYVIGEDREVVEDEKKTLFLET VAKHYPNTVTVEEIEKELENKLTTVEICEILLILVYQRKIEVYNNKLTVNKQEKLKISDR YRKYVEYFAETKFPVISSYGLSGINDLGLDLLRANVMLLFDGTRTDDYILEILKEKHARD EIRVDNLENNTVETILKDYVTTMRTIIEENFLNK >gi|292606569|gb|ADGG01000041.1| GENE 258 227761 - 228717 1135 318 aa, chain - ## HITS:1 COG:FN0700 KEGG:ns NR:ns ## COG: FN0700 COG0341 # Protein_GI_number: 19704035 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Fusobacterium nucleatum # 1 318 1 317 317 500 84.0 1e-141 MKVNLHIIRNIKYYLSVSIVLVILSIVVFFAKGLNYGIDFTGGNLFQLKYNDKKITLTEI NENLDKLSEKLPQVNSNSRKVQISEDGTVILRVPELKEEDKKEILNSLQELGAFNLDKED KVGASIGDDLKKSAIYSLGIGAILIVLYITLRFEFSFAIGGILSLLHDIIIAIGFIALMG YEVDTPFIAAILTILGYSINDTIVIYDRIRENLKRRHTKNWTLEDCMDESVNQTAIRSLN TSITTLFSVIALLIFGGASLKTFIMTLLIGILAGTYSSIFIATPIVYILNKRKGNNMEDM FKDDDENNDGKRVEKILV >gi|292606569|gb|ADGG01000041.1| GENE 259 228717 - 229952 1843 411 aa, chain - ## HITS:1 COG:FN0699 KEGG:ns NR:ns ## COG: FN0699 COG0342 # Protein_GI_number: 19704034 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Fusobacterium nucleatum # 1 406 1 406 411 658 91.0 0 MNSKLFIRLLIVIAIFIAAVYYSIRKPIKLGLDLKGGVYVVLEAVEDKNSNVKIDNDAMN RLVEVLNRRVNGIGVAESSIQKAGDNRVIVELPGLQNAEDAINLIGKTALLEFKIMNEDG TLGETLLTGSALQKAQVSYDNLGRPQISFEMTPDGAHVFAKITRENIGRQLAITLDGEVQ TAPRINTEIAGGSGAITGNYTVEEATATATLLNAGALPIKAEVVETRTVGATLGDESIAQ SKNAGMVAIVLIWVFMIVFYRLPGIIADLAIIIFGFITFACLNFIDATLTLPGIAGFILS LGMAVDANVIIFERIKEELRFGNSIRNSIESGFGKGFVAIFDSNLTTLIITAILFVFGTG PIKGFAVTLALGTLASMFTAITVTKVLLLTFVNVFGFRSPKLFGVTEGGEN >gi|292606569|gb|ADGG01000041.1| GENE 260 229977 - 230393 634 138 aa, chain - ## HITS:1 COG:FN0698 KEGG:ns NR:ns ## COG: FN0698 COG0816 # Protein_GI_number: 19704033 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Fusobacterium nucleatum # 1 138 1 138 138 195 92.0 2e-50 MKRYLALDIGDVRIGVARSDLMGIIATPLETINRKKVKSVKRIAELCKENNTTSIVVGIP KSLDGEEKRQAEKVREYIEKLKKEIEDLEIIEIDERFSTVIADNILKDLNKNGAIEKRKV VDKVAASIILQTYLDMKK >gi|292606569|gb|ADGG01000041.1| GENE 261 230681 - 233284 3622 867 aa, chain - ## HITS:1 COG:FN0697 KEGG:ns NR:ns ## COG: FN0697 COG0013 # Protein_GI_number: 19704032 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 866 1 866 867 1541 90.0 0 MLTGNEIREKFIEFFMQKQHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPYPRV TTYQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKEEAIAWSWEFVTEVLKLNKDKL WVTVFTTDDEAERIWIEKCNFPKERIVRMGESENWWSAGPTGSCGPCSEIHVDLGVQYGG DENSKIGDEGTDNRFIEIWNLVFTEWNRMEDGSLEPLPKKNIDTGAGLERIAAVVQGKPN NFETDLLFPILEEAARITGSQYGKSSETNFSLKVITDHARAVTFLVNDGVIPSNEGRGYI LRRILRRAVRHGRLLGYKDLFMYKMVDKVVERFEVAYPDLKKNLENIRKIVKIEEEKFSN TLDQGIQLVNQEIDNLLANGKNKLDGEVSFKLYDTYGFPYELTEEIAEERGVTVLREEFE AKMEEQKEKARSAREVVMEKGQDSFIEDFYDKHGVTKFTGYEKTEDEATLLSSREAKDGK YLLIFDKTPFYAESGGQVGDQGRIYSDNFSAKVLDVQKQKDIFIHTVEIEKGSAEENKTY KLEVNLLRRLDTAKNHTATHLLHKALREVVGTHVQQAGSLVDSDKLRFDFSHYEAVTAEQ LAKIENIVNEKIREGIDVVVSHHSIEEAKNLGAMMLFGDKYGEVVRVVDVPGFSTELCGG THIDNIAKIGLFKIVSEGGIAAGVRRIEAKTGYGAYLVEKEEADTLKEIEKKLKASNTNV VEKVEKTLESLKDTEKSLETLKQKIALFETKAALSGMEEINGAKVLIATFKDKTADDLRT MIDTIKDNNEKAIVVLASTQDKLSFAVGVTKTLTDKVKAGDLVKQLAEMTGGKGGGRPDF AQAGGKDESKLLDALKEIRATIESKLS >gi|292606569|gb|ADGG01000041.1| GENE 262 233296 - 234021 291 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 232 2 235 245 116 25 8e-25 MISLSADNLVKAYKGRKVVDRVSLEVNKGEIVGLLGPNGAGKTTTFYMITGIVRPDDGEV LCAEEDITNLPMYKRADMGIGYLAQEPSVFRNLTVEENIEVVLEMKGISKKEQRATVDKL LEEFKLTHVRDSLGYALSGGERRRIEIARTIANNPSFILLDEPFAGVDPIAVEDIQNIIR HLKKRGLGILITDHNVRETLSITDRSYIMAKGKVLIEGTPREIANNPEARRIYLGEKFRL D >gi|292606569|gb|ADGG01000041.1| GENE 263 234049 - 236760 3305 903 aa, chain - ## HITS:1 COG:no KEGG:FN0694 NR:ns ## KEGG: FN0694 # Name: not_defined # Def: S-layer protein # Organism: F.nucleatum # Pathway: not_defined # 258 899 1 642 643 896 81.0 0 MTKKKIAYIGAGIVALVLGYFNYFGSDKETGDIRKLIETINAVYENDDLRIEAEKEIDYI DEKESKFEKAKAFIQGMLLSGDNAFLDKDRNLTLDSNILGKSANGWEIKASQLKYNKETQ VLESTKPMYAKNEEKGIEVLGNKFKTTISMDNITLEDGVVIKNKLFSIVADKANYNNEAK TITLEGNIALSNKIGEIGDINTLTDVRKLQVGEVEKGKEMSGTFSKVYFNLNERNLYATD GFDMKYGEVGLKGRDIVLNETDQSFKVTGDVKFTYQDYVFDVNYIEKEANSDTINVYGQI KGGNPEYSVLADKAEYNINDKKFKILGNVVVTSTKGENLKADTFVYSSVTKEADIYGNKI LYTSPTNNLEAEYIHYNSETKEVTTNKPFDSWNEKGEGIKGTSIVYNLGTKDFYSKEEIT VKNKDYGLTTKNVTYKEETGILSAPEPYVIKSNDESSIINGNSITYNKKTGELTSPGNIV MNSRGTIMKGHDLVFNNITGEGKLQGPIPFENKEDKMSGTAKEIIIKRGDYIDLMGPVKV KQDTTNMVVDKARYSYKDELVHVNTPVKFDDPVRSMVGSVSSATYSPKDGILRGTNFNMK EPSRSAKAQNIVLYNKEDRRLELVGNAYISSGADSITGPKIIYYLDTKDAETPTNSIIKY DQYTIKSTYGKVNKESGEVFVKNADVKSVDGNEFYSNQAKGNINDVVHFTGNVKGKSKQK EGDVYFSGDKADLYMAKVDDKYQAKKVIVNTKSTFTQLNRKIVSNYLELDLIKKEVYAKD KPVLTIDDGPKGNTLVKADDVTGYIDQELIKLNKNVYVKNVNEKKEEVVLTADRGAVTKK MADVYDRVKVVTKDSVTTANEGHYDMENRKIRAKGNVHVEYQTDKSAGNVFDNMSSTKKT TKK >gi|292606569|gb|ADGG01000041.1| GENE 264 236753 - 239383 2787 876 aa, chain - ## HITS:1 COG:FN0693 KEGG:ns NR:ns ## COG: FN0693 COG0249 # Protein_GI_number: 19704028 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 876 20 896 896 1409 90.0 0 MSTDTPLMQQYKKIKEEYQNEILMFRLGDFYEMFFEDAKIASKELGLTLTKRNKEKGQDV PLAGVPYHSVASYIAKLVEKGYSVAICEQVEDPKAATGIVKREVTRVITPGTIIDVDFLD KNNNNYIACVKINTIENILAIAYADITTGEFSVFEIKDKNFFEKGLAEINKIQASEILLD EKTYSEYISILEERISFSGVKFTEIKNVKKAEDYLTSYFDIMSVEAFSLKSKDLAVSVAA NLLHYIDDLQKGNELPFSKIEYKNIDNIMELNISTQNNLNLVPKRNEESKGTLLGVLDSC VTSIGSRELKKIIKNPFLDMEKIKERQFYVDYFFNDVLLRENVREKLKDIYDIERIAGKI IYGTENGKDLLSLKDSIRKSLETYKLLKEHQELKKIFELDIEILLDIYNKIELIIDVEAP FSVREGGIIKDGYNSELDELRRISKLGKDFILEIEQRERERTGIKGLKIKYNKVFGYFIE VTKANEHLVPEDYIRKQTLVNSERYIVPDLKEYEEKVITAKSKIEALEYELFKSLSSEIK EHIESLYKLANRIANLDIVSNFAHVATKNSYVKPEISEENILEIKGGRHPIVESLIASGS YVKNDIVLDEKNNLIILTGPNMSGKSTYMKQVALNIIMAHIGSYVAADYAKIPIVDKIFT RVGASDDLLTGQSTFMLEMTEVASILNNATEKSFIVLDEIGRGTSTYDGISIATAITEYI HNNIGAKTIFATHYHELTELEKELERAINFRVEVKENGKNVVFLREIVKGGADKSYGIEV ARLSGVPKDVLNRSRKILKKLENRKNLIESKMKAEQMMLFGNNFEEEEEIETELINENEI KVLEMLKVMDLNSLSPLESLLKLSELKKILLGGNND >gi|292606569|gb|ADGG01000041.1| GENE 265 239434 - 240060 361 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 12 206 148 342 353 143 38 1e-44 MEQHWLESLKKIKRILSEIKSVLNDDVKLSVKIRIGYKEPENYVQIGKIAEEVGCDHITV HGRTREQLYSGKADWSYIKEVKDNVSIPVIGNGDIFTAEDALEKISYSNVDGVMLARGIF GNPWLIRDIREILEYGEVKNPVTKDEKINMAIEHLKRIRIDNDEQFIFDVRKHISWYLKG LENCAEAKRKINTLSDYDEIIKLLEDLH >gi|292606569|gb|ADGG01000041.1| GENE 266 240002 - 240358 144 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 3 113 38 150 353 60 32 1e-44 MKKIYIAPIAGVTDYTFRGILEDFKPDLIFTEMVSVNALSVLNDKTISKILKLRDGNAVQ IFGEDIEKIKSSAQYIQNLGVKHINLNCGCPMKKIVNCGYGAALVREPEKNKKNIIGN >gi|292606569|gb|ADGG01000041.1| GENE 267 240472 - 240732 342 86 aa, chain - ## HITS:1 COG:FN0177 KEGG:ns NR:ns ## COG: FN0177 COG0851 # Protein_GI_number: 19703522 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Fusobacterium nucleatum # 2 86 4 88 99 121 84.0 3e-28 MLSGLFKKENSKDEAKNRLKLVLIQDRAMLPSGVLENMKDDILKVLSKYVEIEKSKLNIE VSPCEDDPRKIALIANIPIIKAGNRK >gi|292606569|gb|ADGG01000041.1| GENE 268 240747 - 241541 1136 264 aa, chain - ## HITS:1 COG:FN0176 KEGG:ns NR:ns ## COG: FN0176 COG2894 # Protein_GI_number: 19703521 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Fusobacterium nucleatum # 1 264 1 264 264 427 90.0 1e-120 MGARVIVITSGKGGVGKTTTTANIGAALADKGHKVLLIDTDIGLRNLDVVMGLENRIVYD LIDVIEGRCRISQALIKDKRCQNLVLLPAAQIRDKNDVSTEQMKELIFSLKDSFDYILID CPAGIEQGFKNAIAAADEAIVVTTPEVSATRDADRIIGLLEAAGIKNPRLVINRLRIDMV KDKNMLGVEDILDILAVKLLGVVPDDENVVISTNKGEPLVYKGDSLAAKAFKNIASRIEG VEVPLLDLDVKMSILEKIKFVFKR >gi|292606569|gb|ADGG01000041.1| GENE 269 241543 - 242232 777 229 aa, chain - ## HITS:1 COG:FN0175 KEGG:ns NR:ns ## COG: FN0175 COG0850 # Protein_GI_number: 19703520 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Fusobacterium nucleatum # 1 229 1 216 216 303 72.0 2e-82 MSNQVIIKGKNDRLVIALNPKADFLELCDVLKTKILEAKNFIGNSRMAIEFSGRKLTSEQ EDILIGILTENSNIVISYTFTEKNEKNEKNEKKIKEKKSKEQVTDFGKLNSLIEEGKTHF YRGTLRSGAKIESDGSVVVVGDVNPSSIIRARGNVIVLGHLNGTVYAGLNGDDKAFVTAI YFNPIQLTIGMKTKTDIQKEVLDSSRVNKKDKFRIARIKNQEIVIEELI >gi|292606569|gb|ADGG01000041.1| GENE 270 242319 - 243275 1629 318 aa, chain - ## HITS:1 COG:FN0174 KEGG:ns NR:ns ## COG: FN0174 COG2070 # Protein_GI_number: 19703519 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Fusobacterium nucleatum # 1 318 1 318 318 517 92.0 1e-146 MKNNKICELLGIKYPIFQGAMAWVSGGELAGAVSRDGGLGIIAGGGMEPELLRQHIKKAK EITSNPFGVNLMLLRPDVEQQMNVCIEEGVKVITTGAGNPGAFMEKLKAANIKVIPVIPT VKLAERMEKIGADAVIVEGMESGGHVGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFLA ALAMGADAIQCGTIFLTAKECIIHQNYKDIILKAKDRSTVVTGTSTGHPVRVIDNKLAKE MIELERSGAPKEEIEKLGTGSLRLAVVEGDTERGSFMSGQVAAMVNDEKTTKEILEYLMN DLKLEVEQLRRRLENWNI >gi|292606569|gb|ADGG01000041.1| GENE 271 243455 - 244942 1657 495 aa, chain - ## HITS:1 COG:no KEGG:FN0173 NR:ns ## KEGG: FN0173 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 35 495 1 461 461 615 78.0 1e-174 MKKFIGFLLLFIVISVTILFFARDILLKAYLERKMSQVNNAEVTIGSLDLDYFERYITLK DVKIMSNLNEEEVFISIDKLKSYYNINFRKKIITFDDAEVEGISFFGDAKYEYNSEEDMV VFENKVTEAEEKAKREKVLTELKNLYLNKIEENHLNLNEIFSRNLSNGKDLSELEKIKQS IKNIKESTEKNLNISEVVGEISNIGKSTKKLGQDLDIKDLSKTEDELRDGMTLEESLDRV VRNFLNRNKLVLFDLDGYINMYLNLVYEQKIYNLSLKYRNILDEIRVRKEKDSKLDDEDV WELFFNSISITSNVYGISFNGEVKNFSTRLSKDTDNTEFKLFGEKGNTIGEFKGFINFDT ELTESTLNIPEADLKDLGSDLLQGGQGVLFQSLKTDGSHLVVNGSIHLKDMKLDVAKIIE TMKIEDEVTREIIAPLLKELNTGEIYYSYDTDSRTLQIKTNIVEIFDEILNGENSSLKSK IREQIKEDFLNKIGA >gi|292606569|gb|ADGG01000041.1| GENE 272 244953 - 245696 272 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227512216|ref|ZP_03942265.1| ribosomal protein S4e [Lactobacillus buchneri ATCC 11577] # 43 246 55 260 264 109 30 1e-22 MKNIDKTNNNLEKIENCIDLAEKTDMIVYSKQFFPISQLNKLKHHELNFSFKGLNEDCEK KLLAVYPKDFTEENLFFPVKYFKIEKKSKFIDLEHKHYLGNILALGLKRESLGDLIVKNG HCYGIILENMFDFLKENLLRVNSSPVEIIEIDESEVPQNEYQELNITLASLRLDSLVAEL TNLSRTLGTNYIDLGNVQLNYEVEREKSTKIAVGDTIIIKKYGKFKIVEENGLTKKEKIK LIIRKYI >gi|292606569|gb|ADGG01000041.1| GENE 273 246168 - 247493 1779 441 aa, chain - ## HITS:1 COG:FN0170 KEGG:ns NR:ns ## COG: FN0170 COG1160 # Protein_GI_number: 19703515 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 440 1 440 440 828 95.0 0 MKPIIAIVGRPNVGKSTLFNNLIGDKIAIVDDLPGVTRDRLYRDTEWSGSEFVIVDTGGL EPRNNDFLMTKIKEQAEVAMNEADVILFVVDGKAGLNPLDDEIAYILRKKNKPVILCVNK IDNYFEQQDDIYDFYGLGFEYLVPISGEHKVNLGDMLDIVVEIIGRMDFPEEDEDVLKLA VIGKPNAGKSSLVNKLSGSERTIVSDIAGTTRDAIDTLIEYKDNKYMIIDTAGIRRKSKV EESLEYYSVLRALKSIKRADVCILMLDAKEGLTEQDKRIAGIAAEELKPIIVVMNKWDLV ENKNNVTMKKMKEELYAELPFLSYAPIEFISALTGQRTTNLLEISDRIYEEYTKRISTGL LNTVLKDAILMNNPPTRKGRLIKINYATQVSVAPPKFVLFCNYPELIHFSYARYIENKFR EAFGFDGSPIMISFEAKSKDL >gi|292606569|gb|ADGG01000041.1| GENE 274 247564 - 248529 1076 321 aa, chain - ## HITS:1 COG:MA2121 KEGG:ns NR:ns ## COG: MA2121 COG2865 # Protein_GI_number: 20090964 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 42 205 174 343 458 85 34.0 1e-16 MIKETDGDSYEKLRSLNQNLTFNYTEQIFKENNLVFGLSQKKTLGLVGEDDLYTNLALLL SEQCNHTLKVAVFEGIEKNIFKDRKEFKGSLLKQVTEAFEFINLVNKTEATFEGLIRKDE RDYPVEAIREALLNAVIHREYSFSGSTLVNIYEDRIEFVSLGGIVYGLSLDSIMLGVSQS RNEKLANIFYRLHLIEAYGTGIRKIFTNYERYNIKPTIKAEVGAFQVVLPNIHYKKIEEK LLVDNSLNKNIEKNITKIKPLYMDILNFVTDKNGATRKEIEEYINLSQTRVITLLKEMLE LNLIRKEKDKIDRRSYKYYKK >gi|292606569|gb|ADGG01000041.1| GENE 275 248662 - 248934 376 90 aa, chain - ## HITS:1 COG:no KEGG:FN1871 NR:ns ## KEGG: FN1871 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 90 1 83 84 79 69.0 5e-14 MVMVLGLVACGEKFPYTSQSTKEKMIKEVKVAMEKAEETRSEKDAQVLLEKMGEIIKIST ELEKRISEGDEKAKEELEKWDKLIKEIGPQ >gi|292606569|gb|ADGG01000041.1| GENE 276 248964 - 249302 476 112 aa, chain - ## HITS:1 COG:FN1873 KEGG:ns NR:ns ## COG: FN1873 COG0537 # Protein_GI_number: 19705178 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Fusobacterium nucleatum # 1 112 1 112 112 203 93.0 5e-53 MATLFTKIINREIPADIVYEDDDVIAFKDIAPVAPIHVLVVPKKEIPTINDISDEDALLI GKVYRVIGKLAKEFGIDKDGYRVVSNCNEHGGQTVFHIHFHLIGGNQLGTMV >gi|292606569|gb|ADGG01000041.1| GENE 277 249315 - 249485 171 56 aa, chain - ## HITS:1 COG:FN1874 KEGG:ns NR:ns ## COG: FN1874 COG0698 # Protein_GI_number: 19705179 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Fusobacterium nucleatum # 1 56 92 149 149 99 86.0 1e-21 MAKLTRQHNDANILALGARIVGDVLALDIVDEFLAASFEGGRHQKRIDEIEACNLF >gi|292606569|gb|ADGG01000041.1| GENE 278 249766 - 250251 176 161 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225085052|ref|YP_002656490.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] # 3 144 7 147 150 72 31 2e-11 MKIGENKVVALDYKVYDADTKELLEDTAELGPYYYIQGMGLFLPKIEAALDSRSKGYKTT IEIPMEEAYGDYDEELVEELTKADFADFEDIYEGMEFVVELEDGSEMVAVITEIDGDKVY TDSNHPFSGRNLLFEVEVADVREATDEELDHGHVHEYENEE >gi|292606569|gb|ADGG01000041.1| GENE 279 250315 - 250917 653 200 aa, chain - ## HITS:1 COG:FN1876 KEGG:ns NR:ns ## COG: FN1876 COG0693 # Protein_GI_number: 19705181 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Fusobacterium nucleatum # 1 200 1 200 200 297 77.0 7e-81 MKKIAVFLFEGAELFEIASFTDIFGWNNIVGLKEFRDIKVETISYKEEIKCTWGGTLKAE KLVTENNIEEIFSYDALVIPGGFGGANFFKDKENKIFKKLVKYFSENNKIIVAICTAVIN LIETREIKNRKVTTYLLDNKRYFNQLKKFDVIPEEKEIVVDENLFTCSGPANALDLSLLI LEKITSKENVEIVKKNMFLK >gi|292606569|gb|ADGG01000041.1| GENE 280 251043 - 251339 500 98 aa, chain + ## HITS:1 COG:no KEGG:FN1878 NR:ns ## KEGG: FN1878 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 97 1 97 99 132 82.0 3e-30 MKPEVRDVINNINRFIQEQKYINVSSNLKMEENVVARNLNGKDPEVVAEVMENLELIFKE ISEVHNVGQADEYTERYYYLSDKFYTDMKQFKIDFFIN >gi|292606569|gb|ADGG01000041.1| GENE 281 251487 - 251759 417 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739595|ref|ZP_04570076.1| SSU ribosomal protein S20P [Fusobacterium sp. 2_1_31] # 1 90 1 90 90 165 100 2e-39 MANSKSAKKRVLVAERNRVRNQAVKTRVKTMAKKVLATLELKDVEAAKTALSVAYKELDK AVSKGILKKNTASRKKARLAAKVNSLVNSL >gi|292606569|gb|ADGG01000041.1| GENE 282 251875 - 252441 695 188 aa, chain + ## HITS:1 COG:FN1880 KEGG:ns NR:ns ## COG: FN1880 COG0778 # Protein_GI_number: 19705185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 188 2 189 192 264 71.0 5e-71 MIEKIKNTRSHRKFTDKKISKEEILKILEGARYSSSAKNSQFLRYSYTVDDEKCKKLFSA VSLGGLLKPEDKATLEERPRAYILISAKKDVSIPDFLQYFDVGIASQNIALLANELGYGA CIVMSYNKNVFKEVLELPEDYETKVVIVLGEAKDIVKLTNSKDENDTKYFIENGTHYVPK LPLDKILL >gi|292606569|gb|ADGG01000041.1| GENE 283 252505 - 254043 2390 512 aa, chain + ## HITS:1 COG:FN1444_2 KEGG:ns NR:ns ## COG: FN1444_2 COG0519 # Protein_GI_number: 19704776 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Fusobacterium nucleatum # 195 512 1 318 318 630 98.0 1e-180 MKKGGIIILDFGSQYNQLIARRVREMGVYAEVVPFHEDVDKILAREPKGIILSGGPASVY TEGAPSLDIKLFEQNIPILGLCYGMQLITHLHGGKVARADKQEFGKAELELDDKNNCLYK NIPNKTTVWMSHGDHVTEMAPNFKIIAHTDSSIAAIENKDKNIYAFQYHPEVTHSQHGFD MLKNFVFGIAKAEQNWSMENYIESTVKQIKETVGNKQVILGLSGGVDSSVAAALINKAIG RQLTCIFVDTGLLRKDEAKQVMEVYAKNFDMNIKCVNAEERFLSKLAGVTDPETKRKIIG KEFVEVFNEEAKKIEGAEFLAQGTIYPDVIESVSVKGPSVTIKSHHNVGGLPEDLKFELL EPLRELFKDEVRKVGRELGIPDYMVDRHPFPGPGLGIRILGEVTKEKADILREADAIFIE ELRKADLYNKVSQAFVVLLPVKSVGVMGDERTYEYTAVLRSANTIDFMTATWSHLPYDFL EKVSNRILNEVKGINRLTYDISSKPPATIEWE >gi|292606569|gb|ADGG01000041.1| GENE 284 254321 - 254503 222 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783351|ref|ZP_06748675.1| ## NR: gi|294783351|ref|ZP_06748675.1| hypothetical protein HMPREF0400_01342 [Fusobacterium sp. 1_1_41FAA] # 1 60 1 60 60 115 100.0 7e-25 MIGVFNKTEITVHLAQEYLDFPMVSRSLARRILSNIDKFKVVFLDFANIETIGQGRSRFC >gi|292606569|gb|ADGG01000041.1| GENE 285 254539 - 255417 567 292 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 [Haemophilus parasuis 29755] # 12 291 50 328 339 223 41 8e-57 MWLTKAHTSQEAPTSTSGSSSLKMLSEKLTKEFGKDFSETNLEQMRKFFKVYGIPQTLSE EFQFNLSWSHYLILMRIKDINARNFYEIETFENNWSLRELKRQVNSSLYERLVLSKDKEK VKELAVKGQIIEKAQDVIKDPYILEFLGLDEKSDYSENKLETEIINKLEMFLLELGKVFT FVGRQVRFTFDERHFRVDLVFYNRLLKCFVLIDLKIGEVTHQDLGQMQMYVNYYDRYVKF PDENDTIGIIICKDKNDTLVKLTLPKDNNQIFASRYTTILPSLDEFKKIIEE >gi|292606569|gb|ADGG01000041.1| GENE 286 255714 - 256034 230 106 aa, chain - ## HITS:1 COG:Ta1471 KEGG:ns NR:ns ## COG: Ta1471 COG0675 # Protein_GI_number: 16082436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma acidophilum # 1 103 17 113 237 68 43.0 2e-12 MGIKEFAAMSDCTKVENLKLSKEYEKKLKREQRKLSKRCKLAKDSDKKLSDSKNYQKQKK KVAKIRNKRKDFINKLSTKIINNHDIICIEDLNIKGMLKNHKLDQM >gi|292606569|gb|ADGG01000041.1| GENE 287 256037 - 256585 495 182 aa, chain - ## HITS:1 COG:BBH40 KEGG:ns NR:ns ## COG: BBH40 COG0675 # Protein_GI_number: 11496700 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Borrelia burgdorferi # 6 132 5 132 155 98 51.0 6e-21 MKIVKKAYKFRIYPTLEQVIFFLKNFGCVRKVHNLMLDDRKKVYEEYKSTGIKTKYATPA KYKEEYPYLKEVDSLALANAQLNLEKAYKNFLKNKDFGFPKYKCKSNPVQSYTTNNQNTI YIKDSYIKLPKLKSLVKIKLHREIKGIIKSVTISKNSLDHYFASILCEEEIEELPKTNKI LE >gi|292606569|gb|ADGG01000041.1| GENE 288 256748 - 258382 1870 544 aa, chain - ## HITS:1 COG:no KEGG:FN1654 NR:ns ## KEGG: FN1654 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 543 28 570 571 767 76.0 0 MKKGIGLGIDDFRKIIKEDCYYFDKTNWIEELLKDRSQTKLFTRPRRFGKTLNMSTLKYF FDVKNAEENRKLFKDLYIEKSEYFKEQGQYPVIFISLKDLKKNTWEDAFFELKALLREVY EEHSYVKEKLSDIEKEEYDKILMKTEDAEYGRALRNLTKYLHTYYQKEVVLLIDEYDNPL IVANTFNYYKDSINFFRDFFSTALKTNPYLKTAVLTGIVQVAKEGIFSGLNNVITYNILK DKFETFFGLSEEEVEAALKYFEMDYQIEEVKKWYDGYKFGEKEIYNPWSILNYLSNGKLQ AYWVNTSDNALIYENLSIANMDVFNCLEKLFEGKEIKKEISPFFTFEELERYNGIWQLMV YNGYLKLNQKLEDDEYLLTIPNYEIQTFFKKGFIDKYLIGSNYFNPIMRTLLEGNIDEFG RMLEEIFLINTSFHDLKAESVYHTFLLGMLIWLRDKYEVKSNGERGQGRYDILLLPLDKK KPAFVFEFKVSKTIKGLESKAEEALNQIKEKQYDVGIKESGIDKIYRIGLAFKGKKVKIK YELT >gi|292606569|gb|ADGG01000041.1| GENE 289 258495 - 259694 1696 399 aa, chain - ## HITS:1 COG:FN1667 KEGG:ns NR:ns ## COG: FN1667 COG1088 # Protein_GI_number: 19704988 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Fusobacterium nucleatum # 1 399 1 399 399 715 92.0 0 MKTYLVTGAAGFIGANFLKYILKKYEDVNVIVVDALTYAGNLGTIKEELKDSRVKFEKVD IRDRKEIERIFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWTVS KDENGYPVYREGIKYLQVSTDEVYGSLSKDYDEAIELVIDDEDVKKVVKNRKNLKTYGDK FFTENSPADPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIK NILEGKKLPVYGKGDNVRDWLYVEDHCKGIDLVLRNAKVGEVYNIGGFNEEKNINIVKLV IDILKEEITNNDEYKKVLKTDLSNISYDLITYVQDRLGHDMRYAIDPSKIAKDLGWYPET DFETGIRKTVKWYLENQEWVNEVASGDYQKYYEEMYGNK >gi|292606569|gb|ADGG01000041.1| GENE 290 259706 - 261220 1127 504 aa, chain - ## HITS:1 COG:CAC3047 KEGG:ns NR:ns ## COG: CAC3047 COG0728 # Protein_GI_number: 15896298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Clostridium acetobutylicum # 3 422 11 430 520 176 33.0 7e-44 MGKIIIIAIIFNIISKFLAFFRELSLAYFFGASLLTDAYLVAISIPTTIFGIIGSGILNG YIPMYNHIRENSNTYNAKRFTNNFINVMLLFSFIVFLFGFSFSDFLVKLFSFGFDKATLE LASFYTKISIFSIFPIILVSIFSGFLQVNNKFLTVAFISIPTNFIYIIGSYIAYKTNIFT MLVLFTCLAMFFQLIFLYPFVLKNKFKFSFKVNLYDKNLHKLLMLGIPIIIGTSLEQINS LIDRTVASGLGSGSITILNYATKLNGAMLSLSVIAILSILYPKFSRLVSENNIKELKEQI KYIINMIFIFSIPTMFGIIALNREVSIFIFGRGNLDRNSVLATAKCLSAYSLCFVALCLR DLATKIFYSFKDSKTPVINSGIGIGLNIILNIILSKYLGIIGIALATSVSTVFISILLFY NLRRYDIYLEKSNLIILSKVLVASSFMILVIYLSKKYLSSYGNFSILIYMINAGISYILA VLLLGVNEVKDLFKLFLKVFKLKR >gi|292606569|gb|ADGG01000041.1| GENE 291 261451 - 261642 271 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783356|ref|ZP_06748680.1| ## NR: gi|294783356|ref|ZP_06748680.1| N-acylneuraminate cytidylyltransferase [Fusobacterium sp. 1_1_41FAA] # 1 63 354 416 416 102 100.0 7e-21 KKEEIFSLNEYLKNNLDELIKYIELNKEMVDEFKNLKLDYTYDGYHLNEVGYKKMKTIIE KEI Prediction of potential genes in microbial genomes Time: Thu May 19 22:16:48 2011 Seq name: gi|292606568|gb|ADGG01000042.1| Fusobacterium sp. 1_1_41FAA cont1.42, whole genome shotgun sequence Length of sequence - 167479 bp Number of predicted genes - 161, with homology - 161 Number of transcription units - 42, operones - 28 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 - CDS 122 - 1372 1322 ## COG1083 CMP-N-acetylneuraminic acid synthetase 2 1 Op 2 1/0.333 - CDS 1387 - 2556 1337 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 3 1 Op 3 1/0.333 - CDS 2565 - 3581 1341 ## COG2089 Sialic acid synthase 4 1 Op 4 9/0.000 - CDS 3596 - 4237 805 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 5 1 Op 5 . - CDS 4252 - 5754 1877 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 6 1 Op 6 . - CDS 5775 - 6740 1097 ## COG0726 Predicted xylanase/chitin deacetylase 7 1 Op 7 . - CDS 6788 - 7852 620 ## gi|294783362|ref|ZP_06748686.1| O-antigen polymerase superfamily - Prom 7893 - 7952 11.7 8 2 Op 1 . - CDS 7954 - 9102 778 ## gi|294783363|ref|ZP_06748687.1| conserved hypothetical protein 9 2 Op 2 . - CDS 9095 - 10183 1570 ## COG0673 Predicted dehydrogenases and related proteins 10 2 Op 3 . - CDS 10176 - 11399 1075 ## COG0438 Glycosyltransferase 11 2 Op 4 . - CDS 11409 - 12359 1187 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 12 2 Op 5 . - CDS 12368 - 13003 710 ## COG2120 Uncharacterized proteins, LmbE homologs 13 2 Op 6 . - CDS 13012 - 13890 1107 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 14 2 Op 7 . - CDS 13899 - 15095 1613 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 15 2 Op 8 . - CDS 15098 - 16396 1749 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 16 2 Op 9 5/0.000 - CDS 16453 - 17580 1151 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Prom 17616 - 17675 2.2 17 2 Op 10 2/0.000 - CDS 17683 - 18270 636 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 18 2 Op 11 . - CDS 18274 - 20085 1659 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 19 2 Op 12 . - CDS 20097 - 21092 1063 ## FN1697 hypothetical protein 20 2 Op 13 9/0.000 - CDS 21112 - 22005 1083 ## COG1091 dTDP-4-dehydrorhamnose reductase 21 2 Op 14 . - CDS 22002 - 22565 570 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 22 2 Op 15 1/0.333 - CDS 22642 - 23457 924 ## COG1968 Uncharacterized bacitracin resistance protein 23 2 Op 16 . - CDS 23471 - 24469 1555 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 24501 - 24560 11.4 + Prom 24485 - 24544 10.4 24 3 Op 1 . + CDS 24630 - 26912 2374 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily 25 3 Op 2 3/0.000 + CDS 26932 - 27702 798 ## COG0730 Predicted permeases 26 3 Op 3 . + CDS 27763 - 28713 392 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase + Term 28731 - 28780 8.4 - Term 28713 - 28774 -0.2 27 4 Op 1 44/0.000 - CDS 28790 - 29776 1164 ## COG4608 ABC-type oligopeptide transport system, ATPase component 28 4 Op 2 5/0.000 - CDS 29757 - 30542 468 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 29 4 Op 3 5/0.000 - CDS 30554 - 32137 2291 ## COG0747 ABC-type dipeptide transport system, periplasmic component 30 4 Op 4 49/0.000 - CDS 32183 - 32959 1254 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 31 4 Op 5 . - CDS 33014 - 33952 992 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 34094 - 34153 12.3 - Term 34020 - 34079 5.4 32 5 Op 1 . - CDS 34162 - 34740 589 ## Lebu_0032 hypothetical protein 33 5 Op 2 . - CDS 34724 - 35965 1369 ## COG3950 Predicted ATP-binding protein involved in virulence - Prom 35990 - 36049 6.2 + Prom 35970 - 36029 11.9 34 6 Op 1 1/0.333 + CDS 36103 - 37374 2054 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 35 6 Op 2 1/0.333 + CDS 37384 - 38088 345 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 36 6 Op 3 1/0.333 + CDS 38099 - 38686 622 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 37 6 Op 4 . + CDS 38699 - 41278 4036 ## COG0495 Leucyl-tRNA synthetase 38 6 Op 5 . + CDS 41293 - 41496 183 ## FN1516 hypothetical protein 39 7 Tu 1 . - CDS 41553 - 42404 789 ## COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase + Prom 42638 - 42697 13.8 40 8 Op 1 . + CDS 42730 - 44973 2823 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 41 8 Op 2 . + CDS 44999 - 48937 4712 ## FN0498 hypothetical protein + Term 48941 - 48986 8.4 - Term 48935 - 48966 3.4 42 9 Tu 1 . - CDS 48967 - 49623 628 ## COG1802 Transcriptional regulators - Prom 49649 - 49708 11.0 + Prom 49689 - 49748 10.5 43 10 Tu 1 . + CDS 49855 - 51237 2206 ## COG3033 Tryptophanase + Term 51282 - 51339 4.0 + Prom 51291 - 51350 7.6 44 11 Tu 1 . + CDS 51376 - 52692 1931 ## COG0733 Na+-dependent transporters of the SNF family + Term 52724 - 52762 2.2 - Term 52821 - 52851 -0.6 45 12 Op 1 16/0.000 - CDS 52949 - 53584 830 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 46 12 Op 2 16/0.000 - CDS 53596 - 54972 2352 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 47 12 Op 3 12/0.000 - CDS 54965 - 56734 2350 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 48 12 Op 4 13/0.000 - CDS 56752 - 57060 438 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 49 12 Op 5 11/0.000 - CDS 57053 - 58054 1070 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 50 12 Op 6 11/0.000 - CDS 58066 - 58617 690 ## COG1390 Archaeal/vacuolar-type H+-ATPase subunit E 51 12 Op 7 16/0.000 - CDS 58633 - 59115 699 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K - Prom 59143 - 59202 8.6 52 12 Op 8 . - CDS 59365 - 61278 2130 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 53 12 Op 9 . - CDS 61265 - 61606 454 ## FN1742 V-type sodium ATP synthase subunit G (EC:3.6.3.15) - Prom 61638 - 61697 14.7 54 13 Op 1 3/0.000 - CDS 61972 - 62538 590 ## COG0352 Thiamine monophosphate synthase 55 13 Op 2 5/0.000 - CDS 62593 - 63723 1216 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 56 13 Op 3 5/0.000 - CDS 63723 - 64496 1272 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 57 13 Op 4 5/0.000 - CDS 64493 - 65110 821 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 58 13 Op 5 1/0.333 - CDS 65114 - 65308 355 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 59 13 Op 6 8/0.000 - CDS 65318 - 66619 1840 ## COG0422 Thiamine biosynthesis protein ThiC 60 13 Op 7 11/0.000 - CDS 66636 - 67256 764 ## COG0352 Thiamine monophosphate synthase 61 13 Op 8 . - CDS 67266 - 68099 905 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 68321 - 68380 10.4 + Prom 68247 - 68306 13.7 62 14 Op 1 . + CDS 68445 - 68897 602 ## FN0037 hypothetical protein 63 14 Op 2 . + CDS 68897 - 69529 593 ## COG2323 Predicted membrane protein + Term 69766 - 69821 5.3 + Prom 69825 - 69884 11.1 64 15 Op 1 2/0.000 + CDS 69912 - 71405 1558 ## COG1404 Subtilisin-like serine proteases 65 15 Op 2 . + CDS 71415 - 72320 818 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 72484 - 72519 1.1 + Prom 72385 - 72444 6.3 66 16 Op 1 . + CDS 72531 - 72974 246 ## gi|294783420|ref|ZP_06748744.1| hypothetical protein HMPREF0400_01413 67 16 Op 2 . + CDS 73024 - 74889 1952 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 68 17 Tu 1 . - CDS 75199 - 76215 1272 ## gi|294783422|ref|ZP_06748746.1| conserved hypothetical protein - Prom 76244 - 76303 11.3 - Term 76346 - 76403 13.1 69 18 Op 1 . - CDS 76414 - 76845 508 ## COG0716 Flavodoxins 70 18 Op 2 . - CDS 76931 - 78424 1627 ## COG0606 Predicted ATPase with chaperone activity - Prom 78461 - 78520 11.9 - Term 78495 - 78541 7.7 71 19 Op 1 5/0.000 - CDS 78559 - 79239 1094 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 72 19 Op 2 . - CDS 79290 - 80603 1799 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 80684 - 80743 8.8 - Term 80772 - 80802 2.0 73 20 Op 1 . - CDS 80812 - 81534 729 ## FN0914 hypothetical protein 74 20 Op 2 1/0.333 - CDS 81547 - 82041 827 ## COG2190 Phosphotransferase system IIA components 75 20 Op 3 . - CDS 82072 - 82557 583 ## COG3187 Heat shock protein - Prom 82585 - 82644 14.6 76 21 Tu 1 . - CDS 82648 - 84384 2188 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 84410 - 84469 13.2 + Prom 84344 - 84403 19.2 77 22 Op 1 . + CDS 84547 - 85026 568 ## FN0663 hypothetical protein 78 22 Op 2 . + CDS 85050 - 86189 1795 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Term 86214 - 86282 5.5 + Prom 86236 - 86295 11.6 79 23 Op 1 . + CDS 86398 - 87282 1093 ## COG1792 Cell shape-determining protein 80 23 Op 2 . + CDS 87279 - 87854 795 ## FN1493 hypothetical protein 81 23 Op 3 1/0.333 + CDS 87865 - 88560 474 ## COG1381 Recombinational DNA repair protein (RecF pathway) 82 23 Op 4 1/0.333 + CDS 88554 - 89024 663 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 83 23 Op 5 1/0.333 + CDS 89041 - 89490 510 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 84 23 Op 6 1/0.333 + CDS 89524 - 90441 1091 ## COG0223 Methionyl-tRNA formyltransferase 85 23 Op 7 1/0.333 + CDS 90435 - 91286 1009 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 86 23 Op 8 1/0.333 + CDS 91299 - 91760 468 ## COG4492 ACT domain-containing protein 87 23 Op 9 1/0.333 + CDS 91792 - 93075 1500 ## COG1253 Hemolysins and related proteins containing CBS domains 88 23 Op 10 1/0.333 + CDS 93072 - 93761 651 ## COG2928 Uncharacterized conserved protein 89 23 Op 11 1/0.333 + CDS 93777 - 94547 815 ## COG0457 FOG: TPR repeat 90 23 Op 12 9/0.000 + CDS 94610 - 95122 838 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 91 23 Op 13 1/0.333 + CDS 95141 - 97318 2716 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 92 23 Op 14 2/0.000 + CDS 97333 - 98454 1357 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 98580 - 98639 8.7 93 23 Op 15 . + CDS 98660 - 99991 1595 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 94 23 Op 16 . + CDS 100012 - 100599 741 ## FN1479 hypothetical protein 95 23 Op 17 . + CDS 100638 - 101207 1043 ## gi|294783449|ref|ZP_06748773.1| stress response protein Nst1 + Term 101264 - 101313 2.3 - Term 101256 - 101292 4.2 96 24 Op 1 . - CDS 101300 - 101509 257 ## gi|294783450|ref|ZP_06748774.1| conserved hypothetical protein 97 24 Op 2 . - CDS 101549 - 102775 1961 ## COG1760 L-serine deaminase 98 24 Op 3 . - CDS 102799 - 103296 751 ## FN1105 hypothetical protein 99 24 Op 4 . - CDS 103300 - 103884 721 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Prom 103912 - 103971 12.2 100 25 Op 1 . - CDS 104034 - 104858 1227 ## COG2849 Uncharacterized protein conserved in bacteria - Term 104904 - 104937 2.4 101 25 Op 2 . - CDS 104938 - 105663 1090 ## FN1358 hypothetical protein - Prom 105693 - 105752 11.2 102 26 Op 1 1/0.333 - CDS 106015 - 107247 1586 ## COG0826 Collagenase and related proteases 103 26 Op 2 16/0.000 - CDS 107262 - 108605 1592 ## COG0305 Replicative DNA helicase 104 26 Op 3 . - CDS 108616 - 109065 722 ## PROTEIN SUPPORTED gi|237739477|ref|ZP_04569958.1| LSU ribosomal protein L9P 105 26 Op 4 . - CDS 109086 - 109916 603 ## FN1829 hypothetical protein 106 26 Op 5 1/0.333 - CDS 109930 - 111378 1542 ## COG2812 DNA polymerase III, gamma/tau subunits 107 26 Op 6 1/0.333 - CDS 111382 - 112776 1855 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 108 26 Op 7 11/0.000 - CDS 112790 - 113746 1166 ## COG0810 Periplasmic protein TonB, links inner and outer membranes 109 26 Op 8 30/0.000 - CDS 113755 - 114195 368 ## COG0848 Biopolymer transport protein 110 26 Op 9 . - CDS 114208 - 114819 652 ## COG0811 Biopolymer transport proteins 111 26 Op 10 . - CDS 114847 - 115227 581 ## FN1835 hypothetical protein 112 26 Op 11 1/0.333 - CDS 115256 - 118066 3450 ## COG0457 FOG: TPR repeat 113 26 Op 12 . - CDS 118079 - 118555 568 ## COG1852 Uncharacterized conserved protein - Prom 118630 - 118689 11.8 114 27 Op 1 . - CDS 118755 - 119552 851 ## COG4936 Predicted sensor domain 115 27 Op 2 40/0.000 - CDS 119565 - 120236 623 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 116 27 Op 3 . - CDS 120243 - 122114 1761 ## COG0642 Signal transduction histidine kinase + Prom 122038 - 122097 10.1 117 28 Tu 1 . + CDS 122249 - 123358 1363 ## COG1454 Alcohol dehydrogenase, class IV + Prom 123403 - 123462 10.0 118 29 Op 1 2/0.000 + CDS 123497 - 124306 1397 ## COG4816 Ethanolamine utilization protein 119 29 Op 2 . + CDS 124327 - 125991 2689 ## COG4909 Propanediol dehydratase, large subunit 120 29 Op 3 1/0.333 + CDS 126009 - 126683 879 ## COG4909 Propanediol dehydratase, large subunit 121 29 Op 4 . + CDS 126697 - 127206 808 ## COG4910 Propanediol dehydratase, small subunit 122 29 Op 5 . + CDS 127228 - 129042 2414 ## CLL_A2102 glycerol dehydratase reactivation factor large subunit 123 29 Op 6 . + CDS 129042 - 129419 505 ## CPR_1008 glycerol dehydratase reactivation factor, small subunit 124 29 Op 7 5/0.000 + CDS 129454 - 129900 820 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 125 29 Op 8 2/0.000 + CDS 129920 - 130198 613 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 126 29 Op 9 . + CDS 130212 - 130832 915 ## COG4869 Propanediol utilization protein 127 29 Op 10 . + CDS 130846 - 131556 856 ## TherJR_0627 flavoprotein 128 29 Op 11 2/0.000 + CDS 131576 - 131845 489 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 129 29 Op 12 2/0.000 + CDS 131855 - 132796 974 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 130 29 Op 13 . + CDS 132812 - 134209 945 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P + Term 134232 - 134302 2.0 + Prom 134215 - 134274 4.7 131 30 Tu 1 . + CDS 134313 - 135044 1329 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 135062 - 135102 8.1 - Term 135042 - 135094 9.0 132 31 Tu 1 . - CDS 135135 - 135620 857 ## COG3212 Predicted membrane protein - Prom 135671 - 135730 17.6 133 32 Op 1 . + CDS 135985 - 136758 647 ## COG0300 Short-chain dehydrogenases of various substrate specificities 134 32 Op 2 . + CDS 136755 - 137951 839 ## Lebu_1741 ceramide glucosyltransferase 135 32 Op 3 . + CDS 137926 - 138567 748 ## FN1846 hypothetical protein 136 32 Op 4 . + CDS 138542 - 139819 1321 ## COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase 137 32 Op 5 3/0.000 + CDS 139816 - 140799 1005 ## COG0451 Nucleoside-diphosphate-sugar epimerases 138 32 Op 6 2/0.000 + CDS 140762 - 141583 705 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 141740 - 141799 9.1 139 32 Op 7 1/0.333 + CDS 141862 - 143136 1446 ## COG1541 Coenzyme F390 synthetase 140 32 Op 8 1/0.333 + CDS 143133 - 144062 1266 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 141 32 Op 9 . + CDS 144079 - 145386 326 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein + Prom 145413 - 145472 9.3 142 33 Tu 1 . + CDS 145499 - 145927 638 ## FN1852 hypothetical protein + Term 145953 - 146005 13.0 + Prom 145939 - 145998 9.3 143 34 Tu 1 . + CDS 146100 - 146510 564 ## COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) + Prom 146587 - 146646 5.2 144 35 Op 1 . + CDS 146678 - 148066 1620 ## FN1854 methylaspartate mutase (EC:5.4.99.1) 145 35 Op 2 . + CDS 148080 - 149537 1212 ## COG4865 Glutamate mutase epsilon subunit + Term 149700 - 149756 -0.8 - Term 149515 - 149545 1.2 146 36 Tu 1 . - CDS 149574 - 150719 1336 ## FN1859 major outer membrane protein - Prom 150778 - 150837 13.4 - Term 150960 - 151015 10.6 147 37 Op 1 21/0.000 - CDS 151023 - 151679 1064 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 148 37 Op 2 1/0.333 - CDS 151697 - 152350 1088 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 152373 - 152432 7.2 149 37 Op 3 . - CDS 152441 - 153817 1861 ## COG2031 Short chain fatty acids transporter - Prom 153958 - 154017 9.8 - Term 153983 - 154022 7.7 150 38 Op 1 . - CDS 154064 - 155188 1404 ## FN1859 major outer membrane protein - Prom 155218 - 155277 6.9 151 38 Op 2 . - CDS 155367 - 156815 1849 ## COG1757 Na+/H+ antiporter - Prom 156942 - 157001 12.3 - Term 156943 - 156994 -0.9 152 39 Op 1 . - CDS 157041 - 157832 1464 ## COG5012 Predicted cobalamin binding protein 153 39 Op 2 . - CDS 157832 - 159388 2445 ## FN1863 L-beta-lysine 5,6-aminomutase alpha subunit (EC:5.4.3.3) 154 39 Op 3 . - CDS 159390 - 160850 1664 ## COG1193 Mismatch repair ATPase (MutS family) 155 39 Op 4 . - CDS 160856 - 161872 763 ## FN1865 hypothetical protein 156 39 Op 5 . - CDS 161876 - 163153 1586 ## COG1509 Lysine 2,3-aminomutase - Prom 163252 - 163311 6.2 157 40 Op 1 . - CDS 163460 - 164497 1726 ## FN1867 Zn-dependent alcohol dehydrogenase and related dehydrogenase 158 40 Op 2 . - CDS 164513 - 165328 1338 ## COG3246 Uncharacterized conserved protein 159 40 Op 3 . - CDS 165352 - 165738 638 ## FN1869 hypothetical protein - Prom 165777 - 165836 8.6 - Term 166303 - 166342 2.3 160 41 Tu 1 . - CDS 166351 - 167073 553 ## FN1870 hypothetical protein - Prom 167113 - 167172 8.2 - Term 167143 - 167176 3.1 161 42 Tu 1 . - CDS 167198 - 167479 371 ## FN2058 hypothetical protein Predicted protein(s) >gi|292606568|gb|ADGG01000042.1| GENE 1 122 - 1372 1322 416 aa, chain - ## HITS:1 COG:NMB0069 KEGG:ns NR:ns ## COG: NMB0069 COG1083 # Protein_GI_number: 15676005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-N-acetylneuraminic acid synthetase # Organism: Neisseria meningitidis MC58 # 2 223 4 226 228 127 39.0 4e-29 MKKIAIIPARAGSKGLPNKNVLMLEDKPLMAYTIEAALESKEFDRVIVSTDSLEYKYIAE KFGAEVLMRDAELASDTASSFVVIEDILKKITNIDYFVLLQVTSPFRNYNHIRESIDLFE KNYSKYDFLVSVQKSDKPSFLIKTIGEDGSLKEYNMNLSDYTRQKYKEYHPNGAIFIGKV KEYLLQKHFLGDKSLAYFMNKEDSIDIDDILDFEFASNILKKKNKEKNLSKSIEKKISEK KNILNLEKDITLIGGTIFENWDIKTLGTKTVNNLGIEGITINQCKKLICELLEVGHLSKE IVIMLDINNIISKISKEQILQEINEITKNILSKNEKTKIYFMEIPSVIFRVDVKKEEIFS LNEYLKNNLDELIKYIELNKEMVDEFKNLKLDYTYDGYHLNEVGYKKMKTIIEKEI >gi|292606568|gb|ADGG01000042.1| GENE 2 1387 - 2556 1337 389 aa, chain - ## HITS:1 COG:Cj1328 KEGG:ns NR:ns ## COG: Cj1328 COG0381 # Protein_GI_number: 15792651 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Campylobacter jejuni # 2 385 4 383 384 283 43.0 6e-76 MKKICVVTGTRAEYGLLKELISQINQDKELELQLIVTGMHLSPEFGFTYKEIEKDGFLIS DKIEILMSSDTDIGISKSTALTLISFSETYNRLKPDMVILLGDRYEILAAALAAYIAKIP ITHLCGGDITEGAYDDAFRHSITKMAYLHFPTTMLAKKRIEQLGENPEKVFYCGYLGNDE LNKLKYKDKKELEKVVNFNLDNYMLIVYHATTLEKENPAEFFENMMKYLIENFKEYNFVI IKGNSDTYGRSINQKIDFLENKYPTRVKGFFSLSREEYLNFLKNSNIMIGNSSSGIYEAP CLKKLNINIGDRQKGRERASTTIDCQTDINELIKIMEKYKKNEYISLLENIENPYFGDDV AEKILSIVKDELSKGKIDLKKKFVDTFIK >gi|292606568|gb|ADGG01000042.1| GENE 3 2565 - 3581 1341 338 aa, chain - ## HITS:1 COG:Cj1327 KEGG:ns NR:ns ## COG: Cj1327 COG2089 # Protein_GI_number: 15792650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sialic acid synthase # Organism: Campylobacter jejuni # 1 332 1 333 334 295 50.0 8e-80 MKKVFIIAEAGVNHNGNMELAYKLVDAAKEAGVDAVKFQVFKAEKVISKSTKMADYQKEN LKENISQLDMVKKLELSYEDFIKINEYCKEKGIMFMATPFDNDSLDFLVDTLKVDVLKIG SGDLNNYPFLEKVALKNKEIILSTGMSNLSDIEGALDFISQYTDKEVKVLHCTTNYPCPM DEVNLKAMNTIKDAFQVAVGYSDHTLGIEVPIAAVALGAEIIEKHFTLDKTMEGPDHVAS LEPDELKEMTRTIRNIEKALGSGIKKPNKSEIKIQSIVKRKIVLAKDVEENHILTESDLE YKRCENGIESKYYKSIIGKKVKRKIDADSPLKWEDILQ >gi|292606568|gb|ADGG01000042.1| GENE 4 3596 - 4237 805 213 aa, chain - ## HITS:1 COG:BS_yvfD KEGG:ns NR:ns ## COG: BS_yvfD COG0110 # Protein_GI_number: 16080477 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Bacillus subtilis # 1 212 1 211 216 115 34.0 4e-26 MKKIIIIGAGAFSREVHWLIEEINNTKNEWEVLGFLDDNLENKGKIIHGKPVLGQIEELK FLSEDVYSIITIANGNVREKIVNKFKNRKYATLIHPNVSIHSSNSIGEGTIICSGNIITV DVNIGKHVIVNLSCTIGHDAVINDYVTIFPGVNISGGVHVGKNSNIGTGSAILQYLKIGK NVTLGSLSNVIRDIPSDCTAVGNPAKVIKKYEK >gi|292606568|gb|ADGG01000042.1| GENE 5 4252 - 5754 1877 500 aa, chain - ## HITS:1 COG:Cj1121c KEGG:ns NR:ns ## COG: Cj1121c COG0399 # Protein_GI_number: 15792446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Campylobacter jejuni # 120 498 5 379 386 238 35.0 2e-62 MKNALIIGAGLASEKILDEMLETKELNIKGILDKDPNKFGAEKKGILILGNYDNIEKYVS NLNIETIIIATTEMSAEEIKEKIQKKIDNKKTVTYILPNIEDLDLKRSLLSQLRNVNIPL SVPNLNKKEILKNLEECLESGWVSTGGKFIPEFEDKVKKYIKTKCAAGVQSGTAGLHLSL QVLGVQRDEEVIVPTLTFIAAVNPVTYLGANPVFIDCDDSLCMDPIKLEKFCSEECDFID GILVNKKTNRKIRVLVIVHVFGNMADMEKIMDIAKKYNLKVLEDATEALGTYYTEGKYKG KFAGTMGDLGVLSFNANKIITTGGGGMVVGDNYDLVEKVRFLSSQAKKDPLYFIHDEIGY NYRMLNLQAALGTSQIDELESFIETKTKNYYLYKEAVNSIGGLQLLTFRKGIRPNYWFYS LVVDEEKYGLNKDELLRKLVSENIQTRPIWGLIHQQKPYQKYEAYQMEKALWYHERVLNI PCSSNLTEEEVEIVISKLKK >gi|292606568|gb|ADGG01000042.1| GENE 6 5775 - 6740 1097 321 aa, chain - ## HITS:1 COG:CAC0436 KEGG:ns NR:ns ## COG: CAC0436 COG0726 # Protein_GI_number: 15893727 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 1 100 51 146 295 61 35.0 2e-09 MKSEVTVVMYHYIRDLKNSRYPNIKGLDIEKFKKQIKFFKENYNFVRIEDLIEYYKNPKE KGLPDKAILLTFDDGYKDHYTYVLPVLLENNIQGSFYIPTKCFQDKKVLDVNKIHFILES CIGEEEKILKEIEDYLEKNKDSRISLLYNDYFKEYAIDSRFDKKEVIFIKRMLQVVLPED YRKKLVDILFKKYVCTIGDKIISERAFWEELYLTPEQIRMMEKLGMHIGFHSHDHVWLSS LSKEEQEFQIKSSINYFKEIGIKTEKMTLSYPYGGYNEESVELIKKYEIPLAFTTKVAIA DLNKDENYALPRLDTNDFYQG >gi|292606568|gb|ADGG01000042.1| GENE 7 6788 - 7852 620 354 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783362|ref|ZP_06748686.1| ## NR: gi|294783362|ref|ZP_06748686.1| O-antigen polymerase superfamily [Fusobacterium sp. 1_1_41FAA] # 1 354 36 389 389 487 100.0 1e-136 MMFGFNLYVLLKRKNIKISKDIFLILLITIFSLIFNMDTLGNYIINIVLIFNIYILTKYR WNYVYKRIFLYANIFNIINMFLYKYSTRIYGAPKVILGYTLPKILVPQIWVASLSLIAVY SLFSINLIKNKLLKIFIVLLSLSLIIVAGKFTTILALLIAGIIYLLNLKFFLLSSKKMLK YTLKAMLTICFCSPFIFYYFTIVYNEFLNTKVVDVSSLFSGRHLLWIDYINYIYDNKFQI LVGNGFFSDEKKISYLLHPHNQYLTIFYTLGILGFIIYYLFYLKVIDESIKIKKQYPNLF MILIIIIFEMCGDDYFILTINPLNLIIIFLIHNSKYNINSEQILKNRKKYIKEN >gi|292606568|gb|ADGG01000042.1| GENE 8 7954 - 9102 778 382 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783363|ref|ZP_06748687.1| ## NR: gi|294783363|ref|ZP_06748687.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 382 1 382 382 604 100.0 1e-171 MFNFYKINGYIYNKISNKNLFINQKYQEKILEEVYKESFQENYFSRSYCQYLCQKKLYKQ NYIFLNFISFFIIKLILLFFKIFSKKIIKEEKVKVLYFGIEKTIPKEFLNYERKKLENHL FLTKKDIEYFKNDILKKSKKEYYFALKVLLKIAIYRYNIEKYSPEIFLVTSEYSWTSSIL TEFCEKNKTLHINYMHGNKWYVIRDSFFKFHKCYVWDEYYAEIFCKLKAFEGQFEVIDYL DFIPQINIEIKELYNTYYLQIDETEDEVEQIIIILEKLRLKTGYKGKIRCHPVYTPQKIK NKIPKEMLDEEENIYHSIVKSNYLISKYSTVLYEAFVMKKGIVVIDDITKGIEKYNSLKE LGWVSGYKPHLMLSEIIKEGSI >gi|292606568|gb|ADGG01000042.1| GENE 9 9095 - 10183 1570 362 aa, chain - ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 4 362 5 359 360 290 40.0 3e-78 MYNVAIIGCGRISHKIAEGVAKNNDRMKLVVLCDPIEEKMFKTEKTYNEKVEAENTILKY KDYKEILKENKIDIVIIATESGYHEEIGLYFLENGINLIIEKPLAMSIEGAQKLVDTAKK NNLKLAASHQNRFNYPIQLLKKAIKENRLGRIFNGMARILWTRDDNYYLQAPWRGTWALD GGTLMNQCIHNIDLINWMMDDEIDIVYAQTSNYIRNIEAEDYGVILIRYKSGKIATIEGS AIVYPKNLEETLTITGEKGTVVIGGMAVNKINTWRVEGDNEQEYLSIDCGDPNSVYGYGH EALYKDFVDALDENREPLVNGIAGLNAVKIILAAYKSQKTGLPIKFSEFKEFSTLDMGGL NV >gi|292606568|gb|ADGG01000042.1| GENE 10 10176 - 11399 1075 407 aa, chain - ## HITS:1 COG:PA3147 KEGG:ns NR:ns ## COG: PA3147 COG0438 # Protein_GI_number: 15598343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 2 394 1 403 413 174 28.0 3e-43 MINIWLINQYSYPPGKSNWRRHFDLFKNFSKKDYNIDVICGSFVHDRKEKILNKGEKYRL INSEGIKYHILSGILYKSKIVRMLSMVQFFFKVLFFSKKLRDKPNIIYASSPHPFNGLAG MYLARKYKCPFILEIRDLWPETWVAMGATTKKSILYKVFAYIEKVLYKNADKIVTLTANK DYYISVGVDEKKVEIVSNGVDLEKYDSLVEEKAPIKFLENKFNILYTGAHGTANCLEFII EVAKLIKNDEIIFNFIGEGEKKEELIKKSEEYNLKNVKFYPPINKNLIPSTLKKGDAMIL PVRDEPLYKYGISPNKIYEYFASSKPIIFSGNVANDMVKEANAGISVEAENIDKIKEAVL SLYSMSKEQREVLGKNGRKYVEENYDTKVLSKKIEKIILTLLEDKNV >gi|292606568|gb|ADGG01000042.1| GENE 11 11409 - 12359 1187 316 aa, chain - ## HITS:1 COG:FN1909 KEGG:ns NR:ns ## COG: FN1909 COG1044 # Protein_GI_number: 19705214 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Fusobacterium nucleatum # 43 316 45 325 332 119 33.0 8e-27 MNNIFKYNILNIDKNYNFYLYGVSTALNPLNNTLIFVNKNKTEYLEKLSIIKEAVIILLS DVEKEKISKISNSNLIIFSKNPRLEYAKLLYKILKEVGYYNPKNYYLKDGYYYGKNLKLG ENIIIEPFVRIGNNVEIGNNTIIKSGTIINDNVKIGRNCYIRENSVIGGEGFGIETDIDG KTYRIPHVGGVEIGNNVEVGALTTVCSGTIEKTIIKDYVKIDDHVHVAHNVVLEEGVLIV AGTVIGGSTKIGKNSRTAPNTAIKNGLKIGSNVVMGMSARVNENLPDNIIVTNEKADTLE NIKKYSKYKKDLLEKI >gi|292606568|gb|ADGG01000042.1| GENE 12 12368 - 13003 710 211 aa, chain - ## HITS:1 COG:MA2464 KEGG:ns NR:ns ## COG: MA2464 COG2120 # Protein_GI_number: 20091295 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Methanosarcina acetivorans str.C2A # 7 211 105 303 309 108 34.0 7e-24 MLEKFNKILCLAPHPDDIELGCGGTVSKLIELGKEVHYCTFSLCEKSIPEGYEKDNAKKE LADSCNVLGINKNNIHFYYFEVREYKRDRQLILEELVKLKNELKPDLVFLPMPNDVHQDH CTISEEGIRAFKKSTILAYEVPWNNFSLENNLFIELTEEQLQKKIDALKAYKSQYFRSYA NEEFVRSLAIVRGVQGKSKYAETFNIIRMYL >gi|292606568|gb|ADGG01000042.1| GENE 13 13012 - 13890 1107 292 aa, chain - ## HITS:1 COG:CT243 KEGG:ns NR:ns ## COG: CT243 COG1044 # Protein_GI_number: 15604964 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Chlamydia trachomatis # 7 292 13 327 354 110 26.0 3e-24 MKLSDLNFGKVEKDGEFNWLGLTAEDYEGKKVLTFLNDEKYYKEIENNKSITCIVTTDEV AKKIEKDKYGIIISENPRKDFFELHNKLVKEDFYFTKRDNQISEKAYISEKANIGNYNII IEDDVIVEADVTIYENVTIKKGAIIRSGSRIGGNGFEFSRFGDEVLSISFAGDVLIEENV EVQNNTCIDRGVFDRTYLGKNVKVDNLVHIAHDVKIGENTLVVACTLIGGRTRIGKNSYL GPNCTVKNGLILGENSKVSMGAVVTKDVKDNEVVTGNFAIPHKQFIENLKKI >gi|292606568|gb|ADGG01000042.1| GENE 14 13899 - 15095 1613 398 aa, chain - ## HITS:1 COG:TM0668 KEGG:ns NR:ns ## COG: TM0668 COG0399 # Protein_GI_number: 15643433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Thermotoga maritima # 3 391 2 371 377 307 39.0 3e-83 MKISLLNLKRQYKYLKEDIEKNISEILEGGAYINGPQTKKFEKRMEEYLGVKHAIGIGNG TDALVIALEALGIGRGDEVITSPFTFFATAEAISVVGAVPVFVDVKLEDFNIDENKIEKA ITSKTKAIMPVHIFGTPANMDKINEIAKKNNLYVIEDACQAIGAKYKGQMIGSLSDIACF SFFPTKNLGTYGDGGLIATNNDNLATICRALKAHGSGENGEIAYNLLNNIEEEVKVKVDS QVDDTVYNPKKYYNYLIGHNSRLDELHAGILNIKLNYLDEWNSKRNSIAKYYGEKLDDKK YKKMQLRENDYNVYHMYIIQTENRNELTKKLDEVGIAYGIYYPVPLHLQKVYKNLGYTEG SLPNAEYLSKRTIAIPVDPELTEEEKEYIVNFLNNLEL >gi|292606568|gb|ADGG01000042.1| GENE 15 15098 - 16396 1749 432 aa, chain - ## HITS:1 COG:PM1003 KEGG:ns NR:ns ## COG: PM1003 COG0677 # Protein_GI_number: 15602868 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pasteurella multocida # 4 423 5 420 424 434 52.0 1e-121 MENKVKICVVGLGYVGLPLAITFAENKYNIIGFDLNKSKIEKYLSGQDPTNEVGDERIQK CKNIEFTYDEKKIKEADFIIVAVPTPVLENKTPDLKPLESSSEIVGKNLKKGAIVVYEST VYPGATEEVCLPVLEKYSGLVCGEDFKIGYSPERINPADKNNTLTTIVKIVSGMDKESLD KIAEVYGSIIKAGVHRASSIKVAEAAKVIENSQRDINIAFVNELALIFDRIGIDTLEVLQ AAGTKWNFLPYRPGLVGGHCIGVDPYYLANKASELGYHAQVILAGRRINDGMAKFVAEKT IKKLINANIRVKGADILIMGLTFKENCPDLRNSKVNDIILELKEYGVNVHIVDPIAEKIE AKKEYGVDLEELKDIKNMDAVIVAVGHKEYRDMDIKELYQYYNEVYSKPLLVDVKSIFDK EEAEKEFDYWRL >gi|292606568|gb|ADGG01000042.1| GENE 16 16453 - 17580 1151 375 aa, chain - ## HITS:1 COG:SP1837 KEGG:ns NR:ns ## COG: SP1837 COG0399 # Protein_GI_number: 15901666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 7 374 35 398 408 377 51.0 1e-104 MDYNRTKNKKFEDEIAKYCGTKKTVALNSATAAMELALRLFDIGEGDEVITSAYTYTASA SVIYHCGAKIILTDTKKGEFNIDPKEIEKLITPRTKAIIPVDIAGLPADYTEIFEVVEKK RNIFNAKKGTYQEKFGRILVLADSAHSFGSDYKGKKIGSVADITSFSFHAIKNLTTAEGG ALTWNLPENFDNEEIYKELMLLALHGQNKDALAKLKAGAWKYDIVMPGYKCNMTDIMASI GLVQLQRYDGEILKKKEELVSYYEKYLGDLTDKIELPIFKNDIKESCKHLYMIRLKNQDE EKRNEVIAKLGENDIATNVHFQPLPLLTAYKRLGFKIEDYPNAYNQYKNEISLPLHDFLT EDDIQYICEYIKKLI >gi|292606568|gb|ADGG01000042.1| GENE 17 17683 - 18270 636 195 aa, chain - ## HITS:1 COG:SP1838 KEGG:ns NR:ns ## COG: SP1838 COG2148 # Protein_GI_number: 15901667 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Streptococcus pneumoniae TIGR4 # 1 195 31 230 230 164 46.0 8e-41 MLKRIFDIISSLFGLILLSPFIIIIAILIKLDSKGPIFFKQVRVTKNGREFKIFKYRTMK IGSDKYSQITVGKDSRITKIGDFLRKYKLDEIPQLINVLLGDMSLVGPRPEVPKYVALYT EEQREILKVRAGITDYASIEFSNENDILANEVDPEKAYIEKIMPKKIELNKKYLSEISVI TDVKIILLTIKKILK >gi|292606568|gb|ADGG01000042.1| GENE 18 18274 - 20085 1659 603 aa, chain - ## HITS:1 COG:FN1696 KEGG:ns NR:ns ## COG: FN1696 COG1086 # Protein_GI_number: 19705017 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Fusobacterium nucleatum # 1 603 5 607 607 994 87.0 0 MNTIRKLVKFLIDIFLLNISLVISIFLKYDQLQLTNKNINILVYFNLSFCIIYFILKIYN NSWRFSGTSEYMSLVALSTSITVLSYMCRVFLKLDTKSSLYFETWIIFTFLLIVARFFMF LTRMKGVGRSDANSENVLIYGAGEAGVLLVKESRINPNFSYKIVGFLDDNPNKKGGKVYG LKVLGGLEDVEKIIEKNDVSKIIISMPSVEQSKISNILKELNKLKDVSVKILPNVDNLIE EGNLSTQLRNIKLEDLLGREEIKINTKEVFDFIQDKIVFVTGGGGSIGSELINQIAKYNP KKIINIEINENASYLMELELKRKYPYLDYKTEIASVRDLDKLAMLFDKYKPDILFHAAAH KHVPLMENNPEEAIKNNIFGTKNVAECCLKYKLESVVLISTDKAVNPTNVMGATKRVCEM IFQKYSEKDSNTKFIAVRFGNVLGSNGSVIPIFSKLIEEGKNLTLTHKDIIRYFMTIPEA AQLVIEAATIGKGGEILILDMGEPVKIYDLAKNMIKLSGSNVGIDIVGLRPGEKLFEELL YDINSSEKTSNNKIFITNMENEKVQVDIDDYYTILKDLIKNNDTVGMRRTLASIIGTFKG RVE >gi|292606568|gb|ADGG01000042.1| GENE 19 20097 - 21092 1063 331 aa, chain - ## HITS:1 COG:no KEGG:FN1697 NR:ns ## KEGG: FN1697 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 328 1 325 328 327 60.0 4e-88 MSNKLVKVEDNFYEEDEISIYDLINIFVKNIKIFIIVTIVGMIVTCIYVGKKIIFDKHNT TYINYTLNYQEIKSYMGEVYYPRKNPKELLLDDKYLELLFENPELKKLYEEKVKQNRDDI STKREFLTENKILEISSLKELAKTKEEQDLLSPDSYRTTVRVNRKLDKNREVSNSIMKAY LTILNQYYKENMFDYLEERKAYLEKSLPVLKKQLEENAVSGKVSISSGGTESTSNNYFKY IYPIQVSNIDTYYEKYKTFESEYQSIKTLIDLELNKSENFIKYDSSIINIKEKSGNMMKL AIGIILSICLGVLATFVKEFIEGYKKNKTAN >gi|292606568|gb|ADGG01000042.1| GENE 20 21112 - 22005 1083 297 aa, chain - ## HITS:1 COG:FN1698 KEGG:ns NR:ns ## COG: FN1698 COG1091 # Protein_GI_number: 19705019 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Fusobacterium nucleatum # 1 296 1 296 298 479 82.0 1e-135 MKLIFGANGKLGTDFKELLDSIGEKYIASDKDEIDITNGDFLRAYVQTMHQNYKVDTIIN CAAYNYVDRAETEKELCYKLNAEAPATLANIAAEIGANYITYSSDFVFNGLLTSYLYGDT TGYTEEDEPHPLSTYAKAKYEGELLVSQVIENPEITSKIFIVRTSWVFGKASMNFVDKII ELSKEKDELKVVDDQVSSPTYSKDLAYYSWELLKSSAENGIYHFTNDGIASKYEEAKYIL DKISWQGNLIAVKREDLGLPAERPKFSKLSCKKIKEKLGITIPDWKDAIDRYFKDNK >gi|292606568|gb|ADGG01000042.1| GENE 21 22002 - 22565 570 187 aa, chain - ## HITS:1 COG:PH0416 KEGG:ns NR:ns ## COG: PH0416 COG1898 # Protein_GI_number: 14590334 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Pyrococcus horikoshii # 7 182 12 180 188 188 54.0 5e-48 MNTIETKIKNLLLIEPKVFEDSRGFFIESYNYNTFKELGINNIFVQDNFSKSSKGVLRGL HFQKGEYAQAKLVNVLRGAVLDVTVDLRKDSETFGKCFIIELNEKNKRMLFIPRGFAHGF LTLEDNTEFFYKCDNFYNPKSEVGIIWNDIDLNIDWNLDKYNIKEDELIISEKDKKNITF KEYRREK >gi|292606568|gb|ADGG01000042.1| GENE 22 22642 - 23457 924 271 aa, chain - ## HITS:1 COG:FN1702 KEGG:ns NR:ns ## COG: FN1702 COG1968 # Protein_GI_number: 19705023 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Fusobacterium nucleatum # 6 259 1 254 266 380 88.0 1e-105 MNALILVIILAVVEGITEFLPVSSTGHMILVNKLIGGEYLSPTFTNSFLIIIQLGAIFSV VVYFWKDLTPFVETKEKFVLRFRLWLKIIVGVLPAMVIGLFLDDIIDKYFMDNVTTIAIT LIVYGVIFIAIEVIYKLKNIKSKVRNFNNLKYSTAFLIGFFQCLAMIPGTSRSGATIIGA LLLGLSRPLAAEFSFYLAIPTMFGATALKLLKNGLVFTEREWSYLALGSAIAFVVAYIVI KWFMDFIKKRSFASFGLYRIILGIIVLILLR >gi|292606568|gb|ADGG01000042.1| GENE 23 23471 - 24469 1555 332 aa, chain - ## HITS:1 COG:FN1703 KEGG:ns NR:ns ## COG: FN1703 COG0451 # Protein_GI_number: 19705024 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Fusobacterium nucleatum # 1 332 1 332 332 613 94.0 1e-175 MIIVTGGAGMIGSAFVWKLNEMGIKDILIVDKLRTEDKWLNIRKREYYDWVDKENLQEWL SCKENADKIEAVIHMGACSATTEKDGDFLMDNNYAYTKFLWNFCAEKNIKYIYASSAATY GMGELGYNDDVSPEELQKLRPLNKYGYSKKIFDDWAFKQKSQPKQWNGLKFFNVYGPQEY HKGRMASMIFHTYNQYMENGYVKLFKSYKEGFKDGEQLRDFVYVKDVVDIMYFMLTNDVE SGIYNIGTGKARSFMDLSMATMRAASHNDNLDKNEVVKLIEMPEDLQGKYQYFTEAKINK LREIGYTKEMHSLEEGVKDYVQNYLAKEDSYL >gi|292606568|gb|ADGG01000042.1| GENE 24 24630 - 26912 2374 760 aa, chain + ## HITS:1 COG:FN1704_1 KEGG:ns NR:ns ## COG: FN1704_1 COG1752 # Protein_GI_number: 19705025 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Fusobacterium nucleatum # 1 374 1 374 375 561 85.0 1e-159 MKKIIFLTYIFLIFNFAYAEEIRLKTKEDVEIEKMEEQIKNLQDKIENTKKLKSAKDNKN LKIALVLSGGGVKGYAHLGVLRVLERENIKIDYITGTSIGALIGTLYSIGYSIDEIEKFL DDINVSSFLETVTDNTNLSLEKKESLKKYSAYLSFDNELNFSFPKGLKGTGEEYLILKKI LGKYEYMDSFDNFPIPLRIVATNLNTGETKAFSKGDVAKVLIASMAIPSIFEPMKIDGEI YVDGLVSRNLPVEEAYEMGADIVIASDIGAPVVEKDDYNILSVMSQANTIQASNITKVSR EKASILISPDIKDISAIASSKKEELMKLGKVAAEKEIDKIRLLTKNDNEKKKEKFVNDND VKIIINKIEYSEKFSNNTIIVLNDIFKSLLNKPITKKEIDKKIIDIYSSKYMDKVYYTID DNTLIIDGEKPHSNRVGLGFNYLTGHGTTFNIGSDLFFNGKFKNSIDLNLKFGDYLGTDL ATLSYYGIKNRFGFLTNIGYDENPFFLYDNRKKIAKFISREAYFKLGLFTQPTNNTMFSY GLLSKFSSLKQDTGGNETKSLEYSENSTKTYLSYKYNSLDSITNPMKGVKADFNYTFSSS FGKSKSNLYGPAFTLKAYAPITPKFSFIYGLNYSSLRGDNIRADRRIKLGGIYTNMDTND FEFYGFNYQEKQVKDLISLTLGFKHKIVYSLYFSTKFNIATFNEENFMQNNRTRMWKDYS QGLAFSLSYDSPIGPIEFSISSDLKNKKPIGSISIGYKFD >gi|292606568|gb|ADGG01000042.1| GENE 25 26932 - 27702 798 256 aa, chain + ## HITS:1 COG:FN1706 KEGG:ns NR:ns ## COG: FN1706 COG0730 # Protein_GI_number: 19705027 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 4 256 2 254 254 374 92.0 1e-103 MFQDFDVMKFLILAVFCFIASVVDAISGGGGLISLPAYFAVGFPPHIALGTNKLSAFLST FASAFKFWKAKKINVEIVSKLFAFSLAGAVLGVKTAVSIDTKYFKPISFAILILVFLYAL KNKSMGEVNYYKGTTPKTLLLGKLMAFGLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS GNTKILNLSSNFASLVVFGFLGKLNWLYGIPIALVMTVGAIIGARLAILKGNKFIKPVFL VVTIVLILKMSVEIFF >gi|292606568|gb|ADGG01000042.1| GENE 26 27763 - 28713 392 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 2 293 15 316 345 155 33 1e-36 MEEIKVYKLENEFLKVELLNLGASIKKLEVKDKNGNFRNVVLGFDDIEKYRENPAYFGAV IGRTAGRIKNTELKIGNKLYKLDSNNNGNTLHGGKNSISHRFWTVEKIENGLVFSIKSPH LDNGYPANVEIKVSYILNKNELEIKYFAKTDSLTYLNLTNHSYFNLSGNSENTIYEDILK INSDYFVGIDENSIPCETIALDNNIFDFRKSKKLKDFFMATDIQKTIANDGIDHPFIFNE KIGRLEIENLESGIKLSVETDNPAVVIYTGNYLQDIGFKKHSAICFETQEVPNLYLNPSF IDENKAYERYTKFIFN >gi|292606568|gb|ADGG01000042.1| GENE 27 28790 - 29776 1164 328 aa, chain - ## HITS:1 COG:FN1525 KEGG:ns NR:ns ## COG: FN1525 COG4608 # Protein_GI_number: 19704857 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 328 15 342 342 608 91.0 1e-174 MVRDLSKDNELILEVRNLTKQFKVAKNNILTACDNINLSMYKGKTLGIVGESGCGKSTFL RMLMNLEKITSGKIFYKGRDISKFSKDEIWESRQNIQMVYQDPGASFNPRMKVVDILTEP LINYDRLKKEDKEKKAIELLEMVDLPADFIHKYPQNMSGGQKQRIGIARALSLEPEVLVC DEATSALDVSIQKNIIELLVKLQKERDLCIVFICHDIALVQAFAHEIAVMYLGNVLEVLP GEKLKDSACHPYTKALLSSLFSINMDFSEKISSIEGDVPSPINLPSGCVFQGRCKFVKEK CRREKPSLEKFDTKHEVACYFAKEISGL >gi|292606568|gb|ADGG01000042.1| GENE 28 29757 - 30542 468 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 248 8 258 563 184 38 7e-93 MLEIKDLTIQYGEKDAVVENFSLTMQKGEIISIVGESGSGKSTVLRSIIGGLLGQGKVVS GDIIFNGKSLLNLSNNEWRELRGTVISMISQDCGATLNPIRKIGSQYIEYINAHTKLNKT EAEEKAHFMLEKVRLPEVKNIMNSYPYELSGGMKQRVGIAIALTFKPELVLADEPTSALD VTTQAQIVKQMMELRDEFNTGIIIVTHNMGVAAYMADKIVVMQKGVVVDSGTREEVINNP KSDYTKKLLKSIPEMDGERFV >gi|292606568|gb|ADGG01000042.1| GENE 29 30554 - 32137 2291 527 aa, chain - ## HITS:1 COG:FN1523 KEGG:ns NR:ns ## COG: FN1523 COG0747 # Protein_GI_number: 19704855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 527 1 526 526 989 95.0 0 MKFFTKKSFAFLMAILMMFTLVACGGDKKEETSAKTETVNTDGELVIGVTSFADTLEPTE QYFSWVITRYGVGENLVRFDEHGELQAALAEEWKVSDDKLTWEFKIRDGVKFSNGNPLTA EAVKSSLDRTFRKSKRADGFFKPTSIVADGQTLKISTEKPVAILPQCLADPLFLIIDTSD NVEEYTTNAPICTGPYIFKEFVPTEYAIVERNENYWGGKPGLAKVTFKCINDQSTRALSL KTGEIGVAYNLKIENKADFEGQDDINIQELKSLRSTYAFMNQHGALGDLSLRQALIRALD KKAYTENLLGGAATPGKAPIPPTLDYGFDKLVDENAFNPESAKEILAKAGYKDVDGDGFV EKPDGSKLELNFVIYTSREELKVYAQAAQANLKDVGINVNLKTVSYETLLDMRDSGNFDL LIWNVLAANTGDPEKYLYENWDSSSASNQAGYKNEKVDELLDKLNVEFDSKKRKELAIEI QQLIMNDAATVFFGYETTFLYSNKKVQNVKMFPMDYYWLTKDVTVSE >gi|292606568|gb|ADGG01000042.1| GENE 30 32183 - 32959 1254 258 aa, chain - ## HITS:1 COG:FN1522 KEGG:ns NR:ns ## COG: FN1522 COG1173 # Protein_GI_number: 19704854 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 258 19 276 276 438 97.0 1e-123 MAIIIVLIAIFAKQIAPKDPLQAVMDKPLHSPDKVNLLGTDILGRDILSRIIYGTRYSLF MTLVLVGTVFTLGTTLGLLAGYFGGIVDTLIMRLADMMVSFPGIILAIAIAGLLGPSMTN AIIAISSVTWPKYARLSRSMVLKIKKELYIEAAKLTGSKDKDILFKYILPNMLTLMLVTA ISDIGALMLEISALSFLGFGAQPPIPEWGAMLNEGRTYLAKAPWLMLYPGMAIVIVVVVF NMLGDNIKDLIDIKEEDF >gi|292606568|gb|ADGG01000042.1| GENE 31 33014 - 33952 992 312 aa, chain - ## HITS:1 COG:FN1521 KEGG:ns NR:ns ## COG: FN1521 COG0601 # Protein_GI_number: 19704853 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 312 1 312 312 513 93.0 1e-145 MMKNNFVNRILQILVVLFGISFFTFSLTYLSPGDPAEIMLTECGNIPTPELLAQTRAELG LDKPFAEQYCRWAGHVVQGELGKSYSLRVPVVDKIKTAFMPTLKLSLLSLGFMILISLPL GILAALKVNKWQDYLVRAISFTGLSIPSFWLGLIFLTIFGVMLRWVTVSGGKADFKSMIL PAFTLGFAMSAKYIRQVRHTVLEELNKDYVVGARMRGIKESTILLKHVLPNALIPLITLL GLSLGSLLGGTAVIEIIYNFPGMGNLAIKAISFRDYPLVQAYVLLIALIYLVINLIVDFS YKLLDKRVEGAN >gi|292606568|gb|ADGG01000042.1| GENE 32 34162 - 34740 589 192 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0032 NR:ns ## KEGG: Lebu_0032 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 132 1 136 137 120 47.0 3e-26 MLKVNKKSEPEEFTKYKSKNKIINWDSFSTEIKQVLKQYLLEEQENRCCPYCEIEINLDK SHIEHIKPKNTFPKLLSDYNNLIACCLTKKRCEDSKASEWDELFINPVIENPEDYFKYDI KTGKIIPIFKDGEKNKKASYTIDLLNLNDNRLCDIRRKYIFEFLNYSKYNKNSLSNYPIK FLSLRRYLEGRL >gi|292606568|gb|ADGG01000042.1| GENE 33 34724 - 35965 1369 413 aa, chain - ## HITS:1 COG:SMc02153 KEGG:ns NR:ns ## COG: SMc02153 COG3950 # Protein_GI_number: 15964255 # Func_class: R General function prediction only # Function: Predicted ATP-binding protein involved in virulence # Organism: Sinorhizobium meliloti # 260 389 291 417 443 62 27.0 2e-09 MKIEKVHIKNIKGIKDLELSLKKDNKILDVIVLAGVNGSGKTTILESIKDFFDNRNVNYN EPEKSNINLNIFFEDFEKNNIEEAEKSSNNYKQPLWNFFNALQSYQYEKYNNNGLYQNLI AKRFENPPKIIYVPANNSFGLVETASTTLSREYQFINYVDSVLMRDIPSYIATRRNYLAT IEEDLTMKEVTNKVINEINVIFDILELDVKLKGFSKDEKIMPIFENSAGEEFNINDLSSG EKQLFLRTLSIKMLEPKNSIILIDEPELSLHPKWQQRIIEVYKKIGENNQIIIATHSPHI LGSVSNENIFILYRDEKGKIEAKTGDELYSSYGQPVDRVLKDIMGLESVRTPKIEKDLEE LRKLVDEDKYDTKEFKEKYNELLEILGNTDEDLFLIDMDAKLKQKVNSNVESK >gi|292606568|gb|ADGG01000042.1| GENE 34 36103 - 37374 2054 423 aa, chain + ## HITS:1 COG:FN1520 KEGG:ns NR:ns ## COG: FN1520 COG0766 # Protein_GI_number: 19704852 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Fusobacterium nucleatum # 1 423 1 423 423 763 95.0 0 MVEAFKIIGGNKIAGELKVDGSKNSTLPIMIATLVEKGTYILRNVPDLRDIRTLVALLQS LGLEVEKLDANSYKIINNGLSGAEASYDLVKKMRASFLVMGGMLAIEKKAKVALPGGCAI GARPVDLHLKGFEALGAKINIEHGYVEATTENGLIGGNIILDFPSVGATENIIMAAVKAK GKTILENAAKEPEIEDLCNFLIKMGAKINGVGTSRLEIDGVEKLTACEYSIIADRIVAGT YIIASILFDGSIKVSGIIPDHLSSFLLKLEEMGAKFKIEGDKLEVLSKLSDLKPVKVTTM PHPGFPTDLQSPMMTLMCLVNGVSEIKETIFENRFMHVPELNRMGAKIEIDSSTAKVTGV SNFSSAEVMASDLRAGASLILAALKANGESIVNRIYHVDRGYENFEEKFKALGANIERIK TQA >gi|292606568|gb|ADGG01000042.1| GENE 35 37384 - 38088 345 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 4 234 9 245 255 137 33 3e-31 MERIIGVNPVTEALLNKEKNIEKLELYNGLKGETVQKLKELASKRNIKIFYTNKKIDNSQ GVAIYISNFDYYKDFDEAYEELASKDKSVVLILDEIQDPRNFGAIIRSAEVFKVDLILIP ERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEASINYNEEDY PNKIVLVLGNEGSGIRKKVREHCDKLVKIPMFGQINSLNVSVASGILLSRIVNK >gi|292606568|gb|ADGG01000042.1| GENE 36 38099 - 38686 622 195 aa, chain + ## HITS:1 COG:FN1518 KEGG:ns NR:ns ## COG: FN1518 COG1595 # Protein_GI_number: 19704850 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Fusobacterium nucleatum # 3 194 2 200 204 254 81.0 5e-68 MEENINIILKKAQTGDSEAIDWILKEYSKILSFNAQKYYLVGAEQEDLLQEGILGLLKAI KFYDETKSSFSSFAFLCIRREMISAIRKANTQKNSVLNEALTTSSMIEDSSDVDSYISSE NNPEEAYLLKEEIKEFKNFSDKNFSKFEKEVLKYLIRGYSYREIAKILSKNLKSIDNTIQ RIRKKSEEWINKEEI >gi|292606568|gb|ADGG01000042.1| GENE 37 38699 - 41278 4036 859 aa, chain + ## HITS:1 COG:FN1517 KEGG:ns NR:ns ## COG: FN1517 COG0495 # Protein_GI_number: 19704849 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 859 1 859 859 1647 92.0 0 MREYDYKEIEKKWQEKWAKDNIFKTENEVAGKENYYVLSMLPYPSGKLHVGHARNYTIGD VISRYKRMKGYNVLQPMGWDSFGLPAENAAIQNGIHPAIWTKSNIENMRRQLKLIGFSYD WEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVNWCPDCQTVLANEQVEDGMCWRHS KTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEKVLTMQKNWIGKSFGTELKLKVVE TGEDLPIFTTRIDTIYGVSYAVVAPEHPIVDKILKANPSIKDKVTEMKNTDMIERGAEGR EKNGIDSGWHIENPVSKEIVPLWIADYVLMNYGTGAVMGVPAHDERDFAFAGKYNLPVKQ VITSKKADEKVELPFVEEGIMINSGDFNGLSSKDALIKIAEYVEEKNLGQRTYKYRLKDW GISRQRYWGTPIPVLYCEKCGEVLEKDENLPVILPDDIEFSGNGNPLETSNQFKEATCPC CGGKARRDTDTMDTFVDSSWYFLRYCDPKNLNLPFAKEIVDKWTPVNQYIGGVEHAVMHL LYARFFFKVLRDLGLLTANEPFKRLLTQGMVLGPSYYSEKENRYLLPKDVVLKGDKAYSE SGEELQVKVEKMSKSKNNGVDPEEMLDKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR FLTRVWRLIFENAELVKNAHDEIDYDKLSKEDKALLIKLNQTIKKVTDAIENNYHFNTAI AANMELINEVQSYVTNSMSSEQAPKILAYTLKKILLMLSPFVPHFCDEIWEELGETGYLF NEKWPEYDEKMLSSDEVTIAVQVNGKIRGSFEIEKDCDKAVVEKAALELPNVTKHLEGMN VVKVIVIPNRIVNIVVKPQ >gi|292606568|gb|ADGG01000042.1| GENE 38 41293 - 41496 183 67 aa, chain + ## HITS:1 COG:no KEGG:FN1516 NR:ns ## KEGG: FN1516 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 64 1 64 64 74 70.0 1e-12 MNGKLKVFLTQILVLLSLVIAINLFAFVAIKFGFLNSEYSIAGCTVIGVGAYLIYLYTLY KDKKRKK >gi|292606568|gb|ADGG01000042.1| GENE 39 41553 - 42404 789 283 aa, chain - ## HITS:1 COG:FN0386 KEGG:ns NR:ns ## COG: FN0386 COG2342 # Protein_GI_number: 19703728 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase # Organism: Fusobacterium nucleatum # 40 279 1 240 254 277 59.0 1e-74 MRDFVKEIRNNTSKNKIIISQNGNELYFKDNKIDEDFFKITNGTTQESLYYGDILKFNVA TSKEANNELLKLLLPIRKKGKPIFVINYGKGEKKRNFLKQESLKTNFINELLPSFSLNDF YKPINDYNTNDIHNLNEVKNYLCLLNPEKFSSMDEYYQALKNTNYDLLLIEVSYDNIFFT KEQIEGLKVKKNGGKRIVIAYLSIGEAEDYRFYWKKEWNKNKPDWIVSENENWSGNYIVK YWNPEWKEIIKGYQKKLDEIGVDGYLLDTLDSYSYFENKKSKK >gi|292606568|gb|ADGG01000042.1| GENE 40 42730 - 44973 2823 747 aa, chain + ## HITS:1 COG:FN0499 KEGG:ns NR:ns ## COG: FN0499 COG1629 # Protein_GI_number: 19703834 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 7 747 1 743 743 1147 81.0 0 MKKLLVLLTILTSIASFSEDVIELGQTTVKGSKTSDYTAPPKEQKNTFVITQERIREKNY KNVEDILRDAPGVVVQNTAFGPRIDMRGSGEKSLSRVKVLVDGVSINPTEETMASLPINA IPVESIKKIEIIPGGGATLYGSGSVGGVVNISTNSNVTKDNFFMDLNYGSFDNRNFGFAG GYNFNKHLYVNYGFSYLNSEDYREHEEKENKIYLLGFDYKINAKHRFRFQTRFSDIKQDS SNQIPVEELKNDRRKAGLNMDINTKDRSYTFDYEYRPTQNATLSTTFYKQKQERDIDTES IDDIKIIASDRTHTWHKEEMNFYDIKSKMHADFKEDKDGAKLKAKFDYNLVENLPSETII GYDYQSATNKRNSLVQSETLKTYNNGYMDINLSQSERLPVINRVDMEMKRKSQGIYVFNK WGLANWLDVTLGGRMEKTKYNGYRENGPNVMPYVEPEVKRIETNRKLDNYAEELGFLFKY NDTGRFYTRYERGFVTPFGNQLTDKIHDTTLKNPNSGFIIPPTVNVASKYVDNNLNAEKT DTFEIGFRDYILGSTLSTSFFLTNTKDEITLISSGVTNPAVNRWKYRNIGKTRRFGLEFE AEQNFGKFRFNQSLTLVRTKVLVANEEAKLERGDQVPMVPRLKATLGLRYNFTDRLAGFV NYTYLAKQESRELRENEDLNKDDIVVKHTIGGHGVVDAGFSYKPDAYSDIKIGAKNLFSK KYNLRETSLEALPAPERNYYLELNVRF >gi|292606568|gb|ADGG01000042.1| GENE 41 44999 - 48937 4712 1312 aa, chain + ## HITS:1 COG:no KEGG:FN0498 NR:ns ## KEGG: FN0498 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 776 1312 1 583 583 591 62.0 1e-167 MKKNILMLMMLIAISSYSNTNKNMSKNPHYRVPLTNEFVEAVEQKGYNDFLRIVDEQNRK NGIYSNYTNKATKKESRLHDNVDLVPVAHVVDSSNGNEWKYELESTKIPISDTDAGRSYQ RTEKLITQGAKSINSDNFEKMGYQRSGYQNRFYLGNGNSVKDIIYLNKDNFSKEVKKAKD NNNERFLVEGVYKTIGSRNTTPDADTYPNEKQTNLLGIKMEEYYSKIQGKTRTEVATFLK TKMEEKGVTGLIQKGDELYTKDSKGNEWKVLWTLEPISLHKSSAPDDERFKDTIFTRIYT YTEFDDNSTTDSAGKKLYTKDGSIYLQDKYNYDTQLLLKDGWGEPKKLSDKIAEAKENID NGGSPSNTFEHYFYDKKNMTEAAFNAKWVAPFENGDFDRDLENLRKEVKEAKARLEPIEK VYNEAKEKTSAALNDPDWPKGVYWWTLKYMTDADFETFLSTKTEKEKKLLKEWKKYSAIE EAKSAEIYTINEDITENIPKRYGFYKSYWGGSPADEKWLDRVLQDSKIIRDLLGKNIQFR GRGRIEGTIDLGEGSNQIEIEEQFTGRYGTNIILGPYAKILNVKKVWIGGQLGSDSGVSI SGRASLSLDIDSTKKNAEGNFYQHALKDSDPKILFISRSGLITLDERNQFQIEMMTSKIG EDGKIDIGRKIDYKYTDIVTGKEYDMTIPFISDSIAHSLVDNKKFSKNGTSLLDVKIKDE IKRLSDEENAVYRSIKNAKKLSVLSETLTTTNKKTTFSVADENKNEEKLTNLALYLKTKD SDELLKDLSQFNLTSTERNEMKKLIQNIKDSDTVQNNIKKEKDLNDKLKLAEKLEKTAEY KSLKLDSFFEDLKDFNIADLREKREDASVRNENTKKIKDLVNKMDVATLTKLKTEYPELN FDELLTAVNNVKSQNVVDKWDFSFLLSKLETLQTATKKQLDYTVENLTESLANINKDLYK ELEGYTTSISKDYQNLKGKIYYTMREEEVLTELKNMLSQLSDRNIYSKLNKISKNEISTY TNIPFEVPHALTDKKHIARGGFISNRTVQDNFKGNIYTSYGLYEKTAESGTKYGLMIGGA NTKHNEVYQRSLTTVATESEIKGVSAYAGGYFNKPVVNNLNWITGVGAQYGRYKVKREMK NNYQELHSEGKVKTNALNTYSGLIFNYPIQEDVFVQLKALLAYTMVKQSKVNESGDLPLD IKSKTYHYVDGEAGISFNKIFYGENLKSSISAGAYGITGLAGYKNGDMDAKIDGSTSSFG IKGDRVKKDAVKINLDYNVQTDIGYNYGLEGTYISNSKENNVKIGIKAGYTF >gi|292606568|gb|ADGG01000042.1| GENE 42 48967 - 49623 628 218 aa, chain - ## HITS:1 COG:FN1987 KEGG:ns NR:ns ## COG: FN1987 COG1802 # Protein_GI_number: 19705283 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 3 218 1 216 216 318 85.0 5e-87 MKVVKDLLSEQIYKILKEDIINSRINFGEVLVNKNLQERFEVSSTPIRDAILRLKEDGIV EEVTRSGAKLIDFDPHFACEVNQLIMTITLGVIEYSLKNPENRKEILANLKKYVELEEDN VATDSYYEYDYHFHKTFFDYSNNKLLKDLFKKYNLINEILVKAYHKGAVSLKNRKACLED HESIIKSIEENNIALTLDLTKKHYLRAEKIFKKNIKIN >gi|292606568|gb|ADGG01000042.1| GENE 43 49855 - 51237 2206 460 aa, chain + ## HITS:1 COG:FN1988 KEGG:ns NR:ns ## COG: FN1988 COG3033 # Protein_GI_number: 19705284 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Fusobacterium nucleatum # 1 460 1 460 460 923 97.0 0 MRFEDYPAEPFRIKSVETVKMIDKATREEVIKKAGYNTFLINSEDVYIDLLTDSGTNAMS DKQWGGLMQGDEAYAGSRNFFHLEETVQDIFGFKHIVPTHQGRGAENLLSQIAIKPGQYV PGNMYFTTTRYHQERNGGIFKDIIRDEAHDATLNVPFKGDIDLNKLQKLIDEVGAENIAY VCLAVTVNLAGGQPVSMKNMKAVRELTNRYGIKVFYDATRCVENAYFIKEQEEGYQDKTI KEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEELFLKAKELVVVYEGMPSYGGLAGR DMEAMAIGLKESLQYEYIRHRVLQVRYLGEKLKEAGVPILEPVGGHAVFLDARRFCPHIP QEEFPAQALAAAIYVECGVRTMERGIISAGRDVKTGENHKPKLETVRVTIPRRVYTYKHM DVVAEGIIKLYKHKDDIKPLEFVYEPKQLRFFTARFGIKK >gi|292606568|gb|ADGG01000042.1| GENE 44 51376 - 52692 1931 438 aa, chain + ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 1 438 1 438 438 699 91.0 0 MDNSERKFQSKLGFILTCVGSAVGMANIWAFPYRVGKYGGAVFLLIYFMFIALFSYVGLS AEYLIGRRAGTGTLGSYEYAWNEKGKGKLGYTLAYIPLLGSMSIAIGYAIISAWVLRTFG AAVTGKILEVDTAQFFGEAVQGNFVILPWHIAVIVITLLTLFAGASSIEKTNKIMMPAFF VLFFILAVRVAFLPGAIEGYKYLFVPDWSYLFNVETWVNAMGQAFFSLSITGSGMIVCGA YLDKKEDIVNGALQTGIFDTLAAMIAAFVVIPASYAFGYPAGAGPSLMFMTIPAVFKQMP FGHVLAILFFISVVFAAVSSLQNMFEVVGESIITRFKMSRKAVIFLLAIISLVIGIFIEP ENKVGPWMDVVTIYIIPFGAVLGAISWYWILKKESFMEELNEGSKVKRSEAYFTVGRYVY VPLVLVVFVLGLIYHGIG >gi|292606568|gb|ADGG01000042.1| GENE 45 52949 - 53584 830 211 aa, chain - ## HITS:1 COG:FN1733 KEGG:ns NR:ns ## COG: FN1733 COG1394 # Protein_GI_number: 19705054 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Fusobacterium nucleatum # 1 211 1 211 211 306 95.0 2e-83 MAKLKVNPTRMALSELKLRLVTAKRGHKLLKDKQDELMRQFINLIKENKKLRVEVEKELS ESFKSFLLASATMSPLFLESAVSFPKEKLSVEIKSKNIMSVNVPEMKFVKEEMEGSIFPY GFVQTSAELDDTVIKLQKVLDNLLSLAEIEKSCQLMADEIEKTRRRVNALEYSTIPNLEE TVKDIRMKLDENERATITRLMKVKQMLEKNA >gi|292606568|gb|ADGG01000042.1| GENE 46 53596 - 54972 2352 458 aa, chain - ## HITS:1 COG:FN1734 KEGG:ns NR:ns ## COG: FN1734 COG1156 # Protein_GI_number: 19705055 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Fusobacterium nucleatum # 1 458 1 458 458 876 96.0 0 MLKEYKSVQEIVGPLMIVEGVEGIKYEELVEIQTQTGEKRRGRVLEIDGDRAMIQLFEGS AGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGPKIIPEKRVDINGSPINPVS RDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNVAAQIARQAKVLGDDAKFAVV FGAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIERISTPRMALTCAEYLAFEKG MHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTDLSQIYERAGKIKGKPGSITQ IPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQPPIFVIPSLSRLKDKGIGKGK TREDHADTMNQIYAAYASGREARELAVILGDSALSEADKAFAKFAENFDREYVSQGYETN RNIEETLNLGWKLLKVIPRTELKRIRTEYIDKYLNDKD >gi|292606568|gb|ADGG01000042.1| GENE 47 54965 - 56734 2350 589 aa, chain - ## HITS:1 COG:SPy0154 KEGG:ns NR:ns ## COG: SPy0154 COG1155 # Protein_GI_number: 15674362 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Streptococcus pyogenes M1 GAS # 1 585 1 590 591 738 61.0 0 MKEGRIIKVSGPLVVAEGMEEANVYDVVEVSDNKLIGEIIEMRGDKASIQVYEETTGIGP GDVVVTTGSPLSIELGPGMLEQMFDGIQRPLLKIQEAVGDFLLKGVSVPALDREKKWQFN PTVAVGEEVEPGKVIGTVQETEIVLHKIMVPNGVYGKVKEIKEGEFTVEEIICKIETENG VKELNMIQKWPVRKGRPYLKKLNPVKPLITGQRIIDTFFAVTKGGTAAIPGPFGSGKTVI QHQLAKWADAEVVVYVGCGERGNEMTDVLMEFPEIIDPKTGQSLMKRTVLIANTSNMPVA AREASIYTAITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLSSR IAEFYERAGLVECLGNGEEGALTVIGAVSPPGGDISEPVSQSTLRIAKVFWGLDYALSYR RHFPAINWLNSYSLYQAKMDKYKEEHVDRDFPKFRIEAMALLQEEAKLQEIVRLVGRDSL SEYDQLKLEITKSLREDFLQQNAFHEVDTYCSLDKQFKMLKLILFFYDEAQRAIKEGVYL NEILALPSREKITRAKNISEKELDTFDKIEEEIKEAVSKLIKEGGTTNA >gi|292606568|gb|ADGG01000042.1| GENE 48 56752 - 57060 438 102 aa, chain - ## HITS:1 COG:FN1737 KEGG:ns NR:ns ## COG: FN1737 COG1436 # Protein_GI_number: 19705058 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Fusobacterium nucleatum # 1 102 4 105 105 157 87.0 5e-39 MYKIAIVGDKDSVLAFKILGVDVYISLDAQEARKIIDRISKEGYGIIFVTEQVAKDIPET IKRYNSELIPAIILIPSNKGSLNIGLANIDKNVEKAIGSNIL >gi|292606568|gb|ADGG01000042.1| GENE 49 57053 - 58054 1070 333 aa, chain - ## HITS:1 COG:FN1738 KEGG:ns NR:ns ## COG: FN1738 COG1527 # Protein_GI_number: 19705059 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Fusobacterium nucleatum # 1 333 2 334 334 481 78.0 1e-136 MDREKFVQASVRIRNLEKKLLTKIQFERLYEAENLEEAVRHLNETAYSEDLAKIDRAENF EIALSNSLNRTYSEVLKLSPVKELVDILTYKFAFHNIKLAVKEKILQENFEHIYSKVHYE DLPKLKKQFETEKGEKGTWYEDTVIQAYKVFEDTKDPEKIEFFVDKRYFEKLLEVSKKLG LNLIEEYFKNMIDFLNIRTFIRCKRDEQDINILRAALIQDGYIDTEDIASYFYKDIEELI NSYKNSRIGKSLILALKGYNDTGRLLLFEKYMDNFLTNLLKEKVQRMPYGPEIIFTYVHA KEVEIKNLRVCLVGRANGLSADFIKERLREIYV >gi|292606568|gb|ADGG01000042.1| GENE 50 58066 - 58617 690 183 aa, chain - ## HITS:1 COG:FN1739 KEGG:ns NR:ns ## COG: FN1739 COG1390 # Protein_GI_number: 19705060 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit E # Organism: Fusobacterium nucleatum # 1 182 1 182 183 182 70.0 4e-46 MSNLDNLVAEILQQAQKEANRMLTKAKTENSEFSEKENKKIQKEVDAINDKAAEEAQALK ERVISNANLKSRDMILQAKEELVEDVLERVLERLKNIDTKKYLKFVENILKNLNLSKNAE LIVTKDMRLALGDKILDYKISDQTVESGCSIKDRNLIYNNEFSNLIEFNREELEREILNK IFE >gi|292606568|gb|ADGG01000042.1| GENE 51 58633 - 59115 699 160 aa, chain - ## HITS:1 COG:FN1740 KEGG:ns NR:ns ## COG: FN1740 COG0636 # Protein_GI_number: 19705061 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 1 160 1 160 160 216 90.0 2e-56 MENIMTIFQQYGGVVFGVLGAALAVLLSGIGSARGVGIAGEAAAGLIIDEPEKFGKAMVL QLLPGTQGLYGFVIGLLIMFKLSPEMTIAEGLYLLMAGLPVGFVGLRSALYQGQVAVAGI NILAKNETHQTKGIVLAVMVETYAVLAFVMSLLLLNQVQF >gi|292606568|gb|ADGG01000042.1| GENE 52 59365 - 61278 2130 637 aa, chain - ## HITS:1 COG:FN1741 KEGG:ns NR:ns ## COG: FN1741 COG1269 # Protein_GI_number: 19705062 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Fusobacterium nucleatum # 1 637 1 638 638 845 73.0 0 MAIVKMKKFKLFALKKDRKSLLKELQKFSYVHFVKTKEEDKSLKDIEFNQDMTVIKEKSQ KVKWMLNYFLKLFPKDTKKEIDESSVKETLFVLVEQQASKYDFSNDYENLANISGEIDSN KEEIANLETYRKELSKWLNIKESLGNLKAFKTAKFFLGTVAKKNFEPLKDKLRNFEHTYI EEISDESSQINIMLLTSNTEEKELKNELKTYSFTETNFNFDTSFTEEYEKTKNREEELKK ANEKLKEKVEKLLKLIPKLLIQKEYLDNALMRETVVSNFKATDTVNVIEGYIPLDMEEEF KKIVNKNSNKSNYLEITEVDKDDEEVPILLKNSGITGLFASITQMYALPKYNEIDPTAIL SIFYWIFFGMMVADFAYGLILFILSGLALMIGKFDENKKKFLKFFFALSFSTMIWGLLYG SAFGDLIKLPTQVLDSSKDFMSIFILSIIFGAIHLVIALGIKAYILIKNGHFMDVIYDVF LWYLTLTSLIILLLAGRFGLSEFTKNIFIACAVIGMLGIVVFGARDAKTLVGRIGGGLYS LYGITSYIGDFVSYLRLMALGLAGGFIASAINIIVKMLVSKGILGIILGVVVFTLGQSFN IFLSFLSSYVHTSRLTYVEFFSKFYEGGGKAFKKFRV >gi|292606568|gb|ADGG01000042.1| GENE 53 61265 - 61606 454 113 aa, chain - ## HITS:1 COG:no KEGG:FN1742 NR:ns ## KEGG: FN1742 # Name: not_defined # Def: V-type sodium ATP synthase subunit G (EC:3.6.3.15) # Organism: F.nucleatum # Pathway: Oxidative phosphorylation [PATH:fnu00190]; Metabolic pathways [PATH:fnu01100] # 6 113 1 108 108 81 67.0 7e-15 MEVMKVATDAILKVKDAELKAKEIIEKANQEITLLKEETREKIKKFQKDAIETAIKDAEI LKTKYKTEGEAIASPIFKEAEQKVLAIKDVKEDKLESVIELIVERIVNSNGNS >gi|292606568|gb|ADGG01000042.1| GENE 54 61972 - 62538 590 188 aa, chain - ## HITS:1 COG:FN1752 KEGG:ns NR:ns ## COG: FN1752 COG0352 # Protein_GI_number: 19705073 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Fusobacterium nucleatum # 4 188 22 206 206 272 76.0 2e-73 MKILKSKLKKFFLAYERKIILKNFDIVALTLREKDLNKNEYLKLIEKVYPICQKYKINLI LHQNYDLNLDEKYKIDGIHLSYNIFKSLNENIKAELIKKYKRIGVSIHSLDEAKEIENLG ASYVVAGHIFETDCKKGLEPRGLKFVEDLSSTLTIPIFAIGGIDEKNSLSVIDSGAFSVC MMSSIMKY >gi|292606568|gb|ADGG01000042.1| GENE 55 62593 - 63723 1216 376 aa, chain - ## HITS:1 COG:FN1753 KEGG:ns NR:ns ## COG: FN1753 COG1060 # Protein_GI_number: 19705074 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Fusobacterium nucleatum # 1 376 1 376 376 654 88.0 0 MELENINSDIMDRVISEMNSYDYNLFTDEDIREALNKDYLSVRDFQALLSPKAMNYLEEM AKKAKECRERYFGNSVYIFTPLYISNYCDNYCVYCGFNSHNKIKRARLDFEQIEAELKEI AKTGLEEILILTGESERYSSIEYIGEACKLARKYFNNVGIEIYPVNIEDYKYLNSCGVDY VTIFQETYNNEKYKKLHLEGHKKVFSYRFNSQERALIGNMRGVAFGALLGLDDFRKDAFS TGYHAYLLQKKYPHAEISISCPRLRPVINNIKIEEEFVSEKELFQIICAYRLFLPFANIT ISTRENPKFRDNVIKIAATKISAGVDTGIGAHSEYSNKKGDDQFEIADRRTVSEIFEKIK TESLQPVMNDYIYLKD >gi|292606568|gb|ADGG01000042.1| GENE 56 63723 - 64496 1272 257 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 1 255 1 255 257 462 95.0 1e-130 MSDSFKLGNKEFNSRFILGSGKYSNELINSAINYAGAEIVTVAMRRAISGVQENILDYIP KDITLLPNTSGARNAEEAVKIARLARECTQGDFIKIEVIKDSKYLLPDNYETIKATEILA KEGFIVMPYMYPDLNVARALRDAGASCIMPLAAPIGSNRGLITKEFIKILIDEIDLPIIV DAGIGKPSQACEAMEMGVTAIMANTAIATASDIPRMAQAFKYAIQAGRDAYLAKLGRVLE NGASASSPLTGFLNGED >gi|292606568|gb|ADGG01000042.1| GENE 57 64493 - 65110 821 205 aa, chain - ## HITS:1 COG:FN1755 KEGG:ns NR:ns ## COG: FN1755 COG0476 # Protein_GI_number: 19705076 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Fusobacterium nucleatum # 1 161 1 161 165 228 77.0 8e-60 MDLKEEDLLKRNVKGISEKLKKAKVCILGLGGLGSNVAILLARAGIGYLKLVDFDIVEAS NLNRQQYRISHIGLKKTEAIRTIIKEINPFVEIEVLNKKIDRENILSIVGDVEIVVEAFD VAETKAMAIEELLTNGNKMLVSASGMAGIGSANEIITRKIRDNFYLVGDNYSDYEEYSGI MSTRVMICAAHQANIVLRIILGEEK >gi|292606568|gb|ADGG01000042.1| GENE 58 65114 - 65308 355 64 aa, chain - ## HITS:1 COG:FN1756 KEGG:ns NR:ns ## COG: FN1756 COG2104 # Protein_GI_number: 19705077 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Fusobacterium nucleatum # 1 64 1 64 64 96 92.0 1e-20 MAEINGKYEEINDVNLLDYLIENKYRVDRVVVDYNGDIVKKAEFSKINIKNTDKIEIVCF VGGG >gi|292606568|gb|ADGG01000042.1| GENE 59 65318 - 66619 1840 433 aa, chain - ## HITS:1 COG:FN1757 KEGG:ns NR:ns ## COG: FN1757 COG0422 # Protein_GI_number: 19705078 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Fusobacterium nucleatum # 1 433 1 433 433 801 95.0 0 MYKTQMEAAKKGILTKEMKSIAESEAMDEKILMQRVASGEIAIPANKNHSSLVAKGVGSG LSTKINVNLGISKDCPDVDKELEKVKVAIDMKADAIMDLSSFGKTEEFRKKLIAMSTAMV GTVPVYDAIGFYDKELKDIKAEEFLDVVRKHAEDGVDFVTIHAGLNREAVELFKRNERIT NIVSRGGSLMYAWMELNNAENPFYENFDKLLDICEEYDMTISLGDALRPGCLNDATDACQ IKELITLGELTKRAWKRNIQIIIEGPGHMAIDEIEANVKLEKKLCHNAPFYVLGPLVTDI APGYDHITSAIGGAIAAAAGVDFLCYVTPAEHLRLPNLDDMKEGIIASRIAAHAADISKK VPKAIDWDNRMAKYRADINWEGMFAEAIDEEKARRYRKESTPENEDTCTMCGKMCSMRTM KKIMSGEDLNILK >gi|292606568|gb|ADGG01000042.1| GENE 60 66636 - 67256 764 206 aa, chain - ## HITS:1 COG:FN1758 KEGG:ns NR:ns ## COG: FN1758 COG0352 # Protein_GI_number: 19705079 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Fusobacterium nucleatum # 1 206 1 206 206 326 86.0 2e-89 MELKACKIYLVTDEKACLGKDFYVCIEEAIKGGVKIVQLREKNISTKDFYEKALKVKEIC KNYGALFIINDRLDIAQAVGADGVHLGQSDMPIEKAREILKDKFLIGATARNVEEAKRAE LLGADYIGSGAIFGTNTKDNAKKLEIGELKKIVASVKIPVFAIGGININNVSSLKNIGLQ GICAVSGILSEKDCKKAVDIMLKNFN >gi|292606568|gb|ADGG01000042.1| GENE 61 67266 - 68099 905 277 aa, chain - ## HITS:1 COG:FN1759 KEGG:ns NR:ns ## COG: FN1759 COG0351 # Protein_GI_number: 19705080 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Fusobacterium nucleatum # 1 277 13 289 289 424 87.0 1e-119 MKNVLSIAGSDCSAGAGIQADLKTFVANGVYGMTVITSLTAQNPQKVKMVEDVSIEMLRN QLEAILDVMKVSTIKIGMINTKENAELIYDTLLKYKVKNIVLDPIMISTSGKSLIKDETK DFLVNKLFKSVDIITPNLDETKEIVKIILNNENIENIDSVEKMQSYGKIIADFTKKWVLV KGGHLSNSAVDILLNSDETYILEREKIPNNKTHGTGCSLSSAIASNLAKGYSMLDSVKKA KNFVLCSIKNSIDFGEIGGTVNQMGEIYKNIDIEKLY >gi|292606568|gb|ADGG01000042.1| GENE 62 68445 - 68897 602 150 aa, chain + ## HITS:1 COG:no KEGG:FN0037 NR:ns ## KEGG: FN0037 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 150 1 150 150 232 80.0 3e-60 MRFYSYNYLLEQIAKFDWWGAAFTLFLIICLIFTLFKYNKGHKETKFRELAIIFTLTIIV VISIKITQYQKSYINDNRYRQAVHFIEVIAEDLKTDKENIYINTSASIDGALVRIGTLYF RVISGDNGENYLLEKIDLENPKVELIEVNK >gi|292606568|gb|ADGG01000042.1| GENE 63 68897 - 69529 593 210 aa, chain + ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 210 1 210 210 339 85.0 2e-93 MELSYLDVAIKLTMGFLSLVLVINISGKGNLAPSSAMDQVLNYVLGGIVGRVIYDPSITV LQYFIVLMIWTIIVLLLKWLKTNSVIFKSILDGQPVILIKKGVLDVEACRRAGLTAYDIA FKLRTNGIYSIKKVKRAVLEQNGQLIVVLQDEENPKYPIITDGTVQTNILEVIDKDTEWL ETALKEMGYESISDIFLAEYDNGKITVVTY >gi|292606568|gb|ADGG01000042.1| GENE 64 69912 - 71405 1558 497 aa, chain + ## HITS:1 COG:FN2100 KEGG:ns NR:ns ## COG: FN2100 COG1404 # Protein_GI_number: 19705390 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Fusobacterium nucleatum # 82 497 1 416 416 695 86.0 0 MRVRLAKEDVNSNYKVSLIDISREKDFIKILEDYNIKYKKTEYFKDLFMYKLIDINSKFI MILQEKASNYIKYIEPVSIYSLPLQIEDEGGEIPIVYPEENKDYVTLGVIDNGIAHIKHL DPWIKRVHTRFLREETSTTHGTFVSGIALYGDKLENKEIVKNEPFYLLDATVLSATTIEE DDLLKNIALAIEENYKRVKIWNLSLSVRLGIEEDTFSDFGVVLDHLQKTYGVLIFKSAGN GGNFMKQLPKGKLYHGSDSLLSLVVGSITNEGYASNYSRVGLGPKGTIKPDIASYGGDLL RGNNGEMIMKGVNSFSRNGNVASSSGTSFATARISSLATIIYQNICKDFKNFSDFNPILL KALIIHSAKNTDKNLSVEEIGYGIPSTSTEILSYFKNENIKIFNGVMEKNKEIEIDASFF NYKKDIKIKLTLVYDTEFDYLQKGEYIKSDIKIKDISENGKNLTRKFEGILERNKKIELY SDNDIKKNYTLIIEKLN >gi|292606568|gb|ADGG01000042.1| GENE 65 71415 - 72320 818 301 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 301 1 301 301 427 85.0 1e-120 MKKNDNTGMLSTFVGGTLWGVNGVMGNYLFLHKNVTTPWLIPYRLILAGFLLLGYLYYKK GSKIFDILKNPKDLVQIVLFGFIGMLGTQYTYFSAIQFSNAAIATVLTYFGPTLVLIYMC LREKRKPLKYEIVSICLSSFGVFLLATHGDITSLQISFKALVWGILSALSVVFYTVQPES LLKKYGASIVVAWGMMIGGIFITFVTKPWNISVTFDFVTFLVLMLIIVFGTIIAFILYLT GVNIIGPTKASIIACIEPVAATICAILFLGVTFDFLDLIGFICIISTIFIVAYFDKKAKK K >gi|292606568|gb|ADGG01000042.1| GENE 66 72531 - 72974 246 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783420|ref|ZP_06748744.1| ## NR: gi|294783420|ref|ZP_06748744.1| hypothetical protein HMPREF0400_01413 [Fusobacterium sp. 1_1_41FAA] # 1 147 41 187 187 247 99.0 2e-64 MKFCFLTDNFFELYKDCEEIEKKNNRPYATVCLLKYKDLYFAIPIRHHIKHQYAIFTDKE KTKGLDLSKMLIIKDLKYIIQNKTAFISQSEYSQLITKEAFIVSKLNSYIKKYIKALEHQ DIKKNYLLCSMSCLKYFHDELNIKTSY >gi|292606568|gb|ADGG01000042.1| GENE 67 73024 - 74889 1952 621 aa, chain + ## HITS:1 COG:FN2102 KEGG:ns NR:ns ## COG: FN2102 COG0488 # Protein_GI_number: 19705392 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Fusobacterium nucleatum # 1 621 11 631 631 1018 96.0 0 MGFSGETLFKEISFSVDEKDKIGIIGVNGAGKTTLIKLLLGLENSEINPVTNERGTISKK SNLKVGYLAQNTQLNKENTVFNELMTVFNNLLEDYNRMQEINFLLTVDLDNFDKLMEELG EVSERYERHEGYSIEYKIKQILNGLNIPESLWTMKIGNLSGGQNSRVALAKILLEEPDLL ILDEPTNHLDLTSIEWLEKILKDYNKAIILISHDVYFLDNVVNRVFEIEGKRLKDYKGNY TDFLIQKEAYLSGEVKAYEKEQDKIKKMEEFIRRYKAGVKSKQARGREKILNRMEKMENP VVTTQKIKLKFDIKAQSVDLVLDIKNLSKTFEDKLLFKDLNLKVYRGERIGLIGKNGTGK STLLKIINNLEKASSGKFKIGERVSIGYYDQNHQGLGLNNNIIEELMYYFTLSEEEARNI CGAFLFREDDIYKKISSLSGGEKARVAFMKLMLEKPNFLILDEPTNHLDIYSREILMDAL EDYPGTILVVSHDRNFLDTVVTKIYELKTDGVETFDGDYESYKQERDNIKVKNEEAAKSY EEQKKAKNRIASLEKKLVRLEEEIQKIEEEKEEVNKKYLLAGEKNDVDKLMSLQEELDNL DNKILEKYQEYEETEIELKSL >gi|292606568|gb|ADGG01000042.1| GENE 68 75199 - 76215 1272 338 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783422|ref|ZP_06748746.1| ## NR: gi|294783422|ref|ZP_06748746.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 338 1 338 338 605 100.0 1e-171 MKKLFIFLLVVSVILMLVFNSSYKKNPHLSKINDDVSIAKMKIKEKSYFDDSEVEEKIYG DEEEKLLDDILHIKYDDLPIYQIIVTISEQLNTSCEFIIVYHEEYKSGDVSFEWETKEKK VSFEIPITKRNKKYCIMELSELTSSTMNDIDEDEELTSEEKESLKAKTYREAWSPDLFIR FNGEGNFFTLEAIKSLDEIRDLVGFSNQNSNIIVEKNIFDFAEGNYEISEYASAEFLKEI MKANESYMLPFPHMAAPSIESVSDGIYFKLGADRAIIDGAAGNKIGAYLSVTYYKNDKQL AVLYFMLDEELVGTQDVRLEFSNGKELKSWDIINYIQK >gi|292606568|gb|ADGG01000042.1| GENE 69 76414 - 76845 508 143 aa, chain - ## HITS:1 COG:FN0029 KEGG:ns NR:ns ## COG: FN0029 COG0716 # Protein_GI_number: 19703381 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 142 1 142 143 239 83.0 9e-64 MNKVNIVYYSFTGNTLRMVKAFEKGLEEAGVPFKSYSVVELKSDDEAFDCEILALASPAN QTEAIEKEYFQPFMKRNAERFKDKKIYLFGTFGWGTGIYMSHWIKEVEELGAKIVELPMA CKGSPNSETREKLQELAKKIATT >gi|292606568|gb|ADGG01000042.1| GENE 70 76931 - 78424 1627 497 aa, chain - ## HITS:1 COG:FN1614 KEGG:ns NR:ns ## COG: FN1614 COG0606 # Protein_GI_number: 19704935 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Fusobacterium nucleatum # 1 497 1 497 497 816 86.0 0 MKNKIFTSSYLGLESYLVEVEVDISRGLPMFSIVGMGDTAILESKFRVKAALKNSDYEVR PQKIVVNLSPAGIKKEGAQFDLAIAIGIILEMKLLRDPREIVKDYLFIGELSLDGEVKGV TGTINTVILAKEKGFKGVILPYENRNEASLIDGIDIVVVKNITDVVNFIENGVKIPFEKI KIEKDENNVLDFSDVKGQYFAKRAMEISAAGGHNILLIGSPGSGKSMLAKRMIGILPEMS ENEIIESTKIYSVAGELSEKNPIISKRPVRMPHHSSTLPAMVGGGKKAIPGEISLASNGI LVLDEMSEFKHSVLEALRQPLEDGFVSITRAMYRVEFKTNFLLVGTSNPCPCGMLYEGNC KCSNIEIEKYTKKLSGPILDRIDLIVQIKRLNEEELVNSKKGESSAEIKKRVIKAREIQY KRFKEIRTNSTMTQEELKKYCDIKDEDKRFLISALENLKISARVYDKILKIARTIADLEG KEELERKHLLEAISFKK >gi|292606568|gb|ADGG01000042.1| GENE 71 78559 - 79239 1094 226 aa, chain - ## HITS:1 COG:FN1252 KEGG:ns NR:ns ## COG: FN1252 COG3470 # Protein_GI_number: 19704587 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Fusobacterium nucleatum # 1 226 1 228 228 338 92.0 4e-93 MKNFKLLLGALLVLGLVACGEKKEEAKPAEQPAATTEAPKEEAKAEAPAEKPGESGFAEV PIDETVVGPYQVAAVYFQAVDMIPEGKQPSAAESDMHLEADIHLLPEAAKKYGFGDGEDI WPAYLTVNYKVLSEDGKTEITSGTFMPMNADDGAHYGINVKKGLIPIGKYKLQLEIKAPT DYLLHVDSETGVPAAKDGGVAAAEEFFKTQTVEFDWTYTGEQLQNK >gi|292606568|gb|ADGG01000042.1| GENE 72 79290 - 80603 1799 437 aa, chain - ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 8 423 1 416 433 733 91.0 0 MKRYFKSLFAFILVFGLFFSLSSIDIEAAEKKTYNTWQDVAKDMNIEFQAAKKFIEEGNN DEAYNAMNRAYFGYYEVQGFEKNVMVNIAAKRVNEIEATFRRIKHTLKGNIQGNVAELDK EIDTLAMKVYKDAMVLDGVASKDDPDDLGNKVFSNEEVSVGDETAIKLKSFGASFGLLLR EGLEAILVVVAIIAYLVKTGNQKLCKQVYIGMGFGVICSFILAYLIDILLGGVGQELMEG ITMFLAVAVLFWVSNWILSRSEEQAWSRYIKSQVQKSIDQNSGRALIFSAFLAVLREGAE LVLFYKAMLTGGQTNKLFAFYGFLVGAVVLVIIYLIFRYSTVRLPLKPFFTFTSILLFLL CISFMGKGVVELTEAGVISGSTTIPAMNGYQNSWLNIYDRAETLIPQIMLVIASVWMLLN NYLKERKMKKEAVEESK >gi|292606568|gb|ADGG01000042.1| GENE 73 80812 - 81534 729 240 aa, chain - ## HITS:1 COG:no KEGG:FN0914 NR:ns ## KEGG: FN0914 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 237 1 240 243 285 63.0 1e-75 MKFLKKIFLLLFYFALSSVAFADFTTVELPSDFSVSLKKDFSDKEIRTMYYDLKLNSKVS FTCFNNAVSGLEKIRYATDELLVLVDYTKPSTEERLFVVDLSKKKIMFSSLVSHGKGNGG LYATTFTDRNNSYASSSGFYLTGNIYNGKHGRSLVLYGLEEGKNDNAERRTIVMHSADYV SEEFIQKNGSLGRSKGCLALPVELNAKIIDLIHDGVVIYVHTDFDENNEYDFSKLSSNRI >gi|292606568|gb|ADGG01000042.1| GENE 74 81547 - 82041 827 164 aa, chain - ## HITS:1 COG:FN0915 KEGG:ns NR:ns ## COG: FN0915 COG2190 # Protein_GI_number: 19704250 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Fusobacterium nucleatum # 1 164 1 164 164 270 87.0 1e-72 MGLFDIFKKKEKTVVTIYSPMNGKVIELKDVPDEAFAQKMVGDGCAIEPDKGVICSPVDG QLMNIFPTNHALIFETVDGLEMIVHFGIDTVKLDGKGFQKLREAGAIKVGDEIVKYDLEQ ISSEVPSTKSPVIINNMEKVEKIEILSLSKIVKIGEPIMKVTLK >gi|292606568|gb|ADGG01000042.1| GENE 75 82072 - 82557 583 161 aa, chain - ## HITS:1 COG:FN0916 KEGG:ns NR:ns ## COG: FN0916 COG3187 # Protein_GI_number: 19704251 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Fusobacterium nucleatum # 1 154 1 149 149 192 68.0 2e-49 MKKLLILGIATLALTACTDTKVPFLSSKSNSTNSSSNASASSVGIFTNLKEQLNGREFII VTEGYNSKTSIGFKGDRVYGFSGINRYFGTYQVSGGKFIFGEFGLTTLPGSQEAMTQELK FIDTLKKNKSIKLSGDTLTLTSTEGVELIFKDPKAAVIQSK >gi|292606568|gb|ADGG01000042.1| GENE 76 82648 - 84384 2188 578 aa, chain - ## HITS:1 COG:FN1271 KEGG:ns NR:ns ## COG: FN1271 COG0616 # Protein_GI_number: 19704606 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Fusobacterium nucleatum # 14 578 1 565 565 766 76.0 0 MKILHYLKKFILFIIKEIFSFFIKLFLFLLVILAIIGLIVQSIEEKPQVVIKDNAYVVID LADSYKERLLTSSLFEDNAINFYTLLENIKNISFDDKVSGVVLKINSNSLSYAQSEELAH ELSMLRGADKKVIAYFENVNRKNYYLASYADEIYMPSANSTSVNIYPYFREEFYTKKLSD KFGVKFNIIHVGDYKSYQENLAKDSMSKEAREDSTRILDLNYENFLDIVSLNRKLNRDDL DKIIKDGDLVAASSIDLFSNKLIDKYLYWDNLVTLLGGKDKLISIQDYAKNYYEEATLEN SNNIVYVIPLEGDIVESQTEIFSGEAAINVNETIAKLNTAKENKKIKAVVLRVNSPGGSA LTSDIIAEKVKELASEKPVYVSMSSIAASGGYYISANANKIYVDRNTVTGSVGVVSVLVD YSSLLKDNGVNVEKISEGEYSDLYSADTFTEKKYNKIYNSNLKVYEDFLNVVSKGRKIDK EKLKELAEGRVWTGTEAVKNGLADEIGGIYSTIYGVTEDNNIDDYTVVLAKDKVEIGNIY KKYSRYIKMDKKDLIKTTVFKDYLYNKPVTYLPYDILD >gi|292606568|gb|ADGG01000042.1| GENE 77 84547 - 85026 568 159 aa, chain + ## HITS:1 COG:no KEGG:FN0663 NR:ns ## KEGG: FN0663 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 152 1 140 143 118 60.0 6e-26 MISRIRENFAQFVESMNIKKEEILKQNKFISLENLLSFYEENKKLLLDKKENLLTTLNKY FPNINLNFNLDLSFLEKLEIDNIGEIVEKLEQFYDANYIEPVESNLRKKVVEKFKKIIKF TKNIFIDYSDIFLNYTSINLNKKIERAPPYNFDLCLEQK >gi|292606568|gb|ADGG01000042.1| GENE 78 85050 - 86189 1795 379 aa, chain + ## HITS:1 COG:FN0664 KEGG:ns NR:ns ## COG: FN0664 COG2070 # Protein_GI_number: 19703999 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Fusobacterium nucleatum # 1 379 4 382 382 676 86.0 0 MKGIKIGKYYIEKPIVQGGMGVGVSWNNLAGTVSKNGALGTISGICTAYYDNLKYCKKVV NGRPVGAEALNSKEAMMEIFKNARKICGDKPLACNILHAMNDYAKVVEFAIEAGANIIVT GAGLPLELPKLVENHPDVAIVPIVSSARALKIICKKWKAAGRLPDAVIVEGPKSGGHQGA KAEDLFLPEHQLESVVPEVKEERDKWGDFPIIAAGGIWDNDDIQKIMALGADAVQLGTRF IGTYECDASDVFKNILINAKKEDIVIVKSPVGYPGRAIKTDLIKNLVADDQTVKCYSNCV APCNLGEGARKVGFCIANCLSDSYNGKAETGLFFSGENGYKVNKLVSVEELINELMTPNT NENILSIKSENIVENIINF >gi|292606568|gb|ADGG01000042.1| GENE 79 86398 - 87282 1093 294 aa, chain + ## HITS:1 COG:FN1496 KEGG:ns NR:ns ## COG: FN1496 COG1792 # Protein_GI_number: 19704828 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Fusobacterium nucleatum # 80 279 1 200 210 276 77.0 4e-74 MKKEKESKLKILLPILAIIIVIVLIFNRLLFKLKDQVDKVALPVQSKVYNVANRAIGIKD IIFSYEDIIAENENLKKENMTLKIEKIRDEKIYEENERLLKLLAMKENGLYKGELKFARV NFSDINNLNNKVYIDLGTEDNVKVNMIAVYGDYLVGKISQVYNNYSELELITNPNSIVSA RTEDDVLGIARGSDEENGLLYFQPSVYEDNLTVGDEIFTSGVSDIYPEGIKIGKIEKVND KENYAYKMIILKPGFENKDLKEVIIIGRENKVNRPIVKENENINEEIKEGDTKK >gi|292606568|gb|ADGG01000042.1| GENE 80 87279 - 87854 795 191 aa, chain + ## HITS:1 COG:no KEGG:FN1493 NR:ns ## KEGG: FN1493 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 191 1 191 192 226 73.0 3e-58 MKKFLIVLFILVQGLIFAAGKNLADIKTLKFDVVEKTTIKSKKRELSYKIDFMLPNKIKK EVTAPKLNKGEIYLYDYSANQKYVYLPMFNEVRESEIVDDENRIIKAINKIIEEEKKNKD FKQKYNAKVAQTLDIDKQISINIVTYLEVEGYIFPETVEIKESGTKIADVKISNLQINPK LEEKILLNAKK >gi|292606568|gb|ADGG01000042.1| GENE 81 87865 - 88560 474 231 aa, chain + ## HITS:1 COG:FN1492 KEGG:ns NR:ns ## COG: FN1492 COG1381 # Protein_GI_number: 19704824 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Fusobacterium nucleatum # 1 231 1 233 233 305 77.0 6e-83 MIFLRGKGIIISKKDVEEADRYIDIFMEDYGKISTLIKGIRKSKRRDKTAVDILSLTDFQ FYKKNDNIIISNFSTVKDYLAIKSDIDKINMVFYIFSILNQILVENGRNRKLYEVLEKTL DYLNSSEDNRKNYLLLLYFLYIVIKEEGISIEGDINELQFEIPEQKKINLDETSKKILEY LFEDKLKIVINDENYELNSVKKAILVLENYINFNLDTNINAKKMLWGALLW >gi|292606568|gb|ADGG01000042.1| GENE 82 88554 - 89024 663 156 aa, chain + ## HITS:1 COG:FN1491 KEGG:ns NR:ns ## COG: FN1491 COG1762 # Protein_GI_number: 19704823 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Fusobacterium nucleatum # 1 156 6 161 162 243 88.0 1e-64 MVNSIKITDYITEDLIDLDLKSKNRDEILVELSKLLEKSDNIIGEENDILKALVDREKLG STGIGKGVAIPHAKTESAKELTVAFGVSREGIDFNSLDEEEVHLFFVFASPNKDSHIYLK VLARISRLIREEDFREALFNCKTSKEVIECIKEKED >gi|292606568|gb|ADGG01000042.1| GENE 83 89041 - 89490 510 149 aa, chain + ## HITS:1 COG:FN1490 KEGG:ns NR:ns ## COG: FN1490 COG1327 # Protein_GI_number: 19704822 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Fusobacterium nucleatum # 1 149 1 149 149 224 93.0 5e-59 MKCPFCSSEDTKVVDSRTMIDGSTKRRRECNNCLKRFSTYERFEESQIYVVKKDNRRVKY DREKLLRGLTFATVKRNISREELDKIISDIERGLQNSLVSEISSKELGEKVLEKLRELDQ VAYVRFASVYKEFDDIKSFIEIVEQIKKD >gi|292606568|gb|ADGG01000042.1| GENE 84 89524 - 90441 1091 305 aa, chain + ## HITS:1 COG:FN1489 KEGG:ns NR:ns ## COG: FN1489 COG0223 # Protein_GI_number: 19704821 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Fusobacterium nucleatum # 1 305 13 317 317 489 82.0 1e-138 MGTPTFALPSLEKLNARYELLSVFTKIDKVNARGNKIIYSPIKDFALANNLKIYQPENFK DSVLIEEIRAMEPDLIVVVAYGKILPKEVLDIPKYGVINLHSSLLPRFRGAAPINAAIIH GDSKSGVSIMYVEEELDAGPVILQKETEISDEDTFLTLHDRLKNMGADLLVEAIELIKDN KAEPKVQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFVRGMNPAPTAFSMLDKSIIKIYE TIIYDKTYENASCGEVVEYLKGKGPVVKTADGSLIISSAKPENKKQISGVDLINGKFLKI GEKLC >gi|292606568|gb|ADGG01000042.1| GENE 85 90435 - 91286 1009 283 aa, chain + ## HITS:1 COG:FN1488 KEGG:ns NR:ns ## COG: FN1488 COG0190 # Protein_GI_number: 19704820 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Fusobacterium nucleatum # 1 283 1 283 283 451 87.0 1e-126 MLMDGKELAKDIKIKLKNEIDDIKRIYGVTPAVASILVGDDPASQVYVNSQIKSYQDLGI AVHKYSFSKEISEAYLLNLIDKLNKDTEVDGIMINLPLPPQINATKVLNRIKLIKDVDGF KAENLGLLFQNSEDFISPSTPAGIMALIEGYNIDLEGKDVVVVGRSNIVGKPVAALVLNN HGTVTICNSHTKNLAEKTKNADVLISAVGKPKFITEDMVKEGAVVIDVGINRVNGKLEGD VDFENVQKKTSYITPVPGGVGALTVAMLLSNILKSFKANRGII >gi|292606568|gb|ADGG01000042.1| GENE 86 91299 - 91760 468 153 aa, chain + ## HITS:1 COG:FN1487 KEGG:ns NR:ns ## COG: FN1487 COG4492 # Protein_GI_number: 19704819 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Fusobacterium nucleatum # 1 153 1 153 153 222 92.0 2e-58 MAAKSKDKDNKEFYIVDKRILPKSIQNVIKVNDLILKTKMSKYSAIKKVGISRSTYYKYK DFIKPFYEGGEDKVYSLHLSLKDRVGILSDVLDVIAKEKISILTVVQNMAVDGVAKSTIL IKLTQSMLKKVDKIISKIGKLEGIADIRISGSN >gi|292606568|gb|ADGG01000042.1| GENE 87 91792 - 93075 1500 427 aa, chain + ## HITS:1 COG:FN1486 KEGG:ns NR:ns ## COG: FN1486 COG1253 # Protein_GI_number: 19704818 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Fusobacterium nucleatum # 1 426 1 426 426 645 89.0 0 MDTYLNVLILVILILLSGFFSASETALSLYRSNYLENLDEEKHSKKYTVLKKWLKDPNSM LTAIVIGNNIVNILASSIATVVIVNYFGNKGSSVALATAIMTILILIFGEISPKLMARNN SAKIAEGVSVIIYVLSIIFTPFVYCLIFISRFVGRILGVNMESPQLLITEEDIISYVNVG NAEGIIEEDEKEMIHSIVTLGETSAKEVMTPRTSMFALEGEKTINEIWDEITENGFSRIP VYEETIDNIIGILYVKDLMEHVKNNELEIPIKQIVRLAYFVPETKSIIEILKEFRTLKVH IAMVLDEYGGVVGLVTIEDLIEEIVGEIRDEYDDEEDSFFKKIADNEYEVDAMTDIETIN KELELELPISEDYESLGGLIVTTTGKICEVGDEVQIDNIYLKVLEVDKMRVSKVFIKILE EENKEEE >gi|292606568|gb|ADGG01000042.1| GENE 88 93072 - 93761 651 229 aa, chain + ## HITS:1 COG:FN1485 KEGG:ns NR:ns ## COG: FN1485 COG2928 # Protein_GI_number: 19704817 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 210 1 210 223 320 82.0 1e-87 MRLKKNFYTGLLMILPVVITYYIFNWLFNLAFRIINNTIIIKILKRLVDFGFGEKADTFY MQVSVYIAAFLIIFLSITVLGYMTKVVFFSKIIRRGIDILERIPIIKTVYSTSKQIIGIV YSDNGESVYKKVVAVEFPRKGLYAIGFLTADKNTALKEILPDKDIVNVFIPTAPNPTSGF LLCLPKEEVYYLNMSVEWAFKLIVSGGYITEDVVKHNEQKEEQKTEENN >gi|292606568|gb|ADGG01000042.1| GENE 89 93777 - 94547 815 256 aa, chain + ## HITS:1 COG:FN1484 KEGG:ns NR:ns ## COG: FN1484 COG0457 # Protein_GI_number: 19704816 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 19 254 2 239 245 262 82.0 5e-70 MKKMMTIVILSFLFLACFNSQKEKNYNFIKGLNEYQKNDKISALENYKKAYEMDKNNIVL LNEIAYLYVDLGNYEEAEIYYKKALEIKPNDENSLKNLLQLLYFQDKRMEMKKYIPFIID KNSFTYNLSNFRVAILENDEMEVENSLLRISSNDKFLEEYNESFYTELASVTGLSKNTIK YSNIIFEKAYKKYANKNIVDTYTNFLIEIKEYRKAEDILMKYIINNENNLDEYAILKTLY TKENNKEKLRKFKKEF >gi|292606568|gb|ADGG01000042.1| GENE 90 94610 - 95122 838 170 aa, chain + ## HITS:1 COG:FN1483 KEGG:ns NR:ns ## COG: FN1483 COG0503 # Protein_GI_number: 19704815 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 1 170 1 170 170 316 92.0 1e-86 MNLKDYVASIENYPKEGIIFRDITPLMNNGEAYKYATEKIVEFAKNHDIDIVVGPEARGF IFGCPVSYALGVGFVPVRKPGKLPREVVEYAYDLEYGSNKLCLHKDAIKPGQKVLVVDDL LATGGTVEATIKLVEELGGIVAGLAFLIELVDLKGRDKLSNYPMITLMQY >gi|292606568|gb|ADGG01000042.1| GENE 91 95141 - 97318 2716 725 aa, chain + ## HITS:1 COG:FN1482 KEGG:ns NR:ns ## COG: FN1482 COG0317 # Protein_GI_number: 19704814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Fusobacterium nucleatum # 1 725 1 725 725 1291 92.0 0 MMNYWEQLLEKAKENHLNYDFDKLKLALAFAEESHQGQYRKSGDDYIIHPVEVAKILMDM KMDTDTVVAGLLHDVVEDTLIPIADIKYNFGDTVAVLVDGVTKLKALPNGTKNQAENIRK MILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQAISKETLDIYAPLAHRLGMAKIKSE LEDLSFSYLHHEEYLEIKRLVENTKEERKDYIDNFIRTMKRTLVDLGLKAEVKGRFKHFY SIYKKMYQKGKEFDDIYDLMGVRVIVEDKAACYHILGIVHSQYTPVPGRFKDYIAVPKSN NYQSIHTTIVGPLGKFIEIQIRTKDMDDIAEEGIAAHWNYKENKKTSKDDNIYGWLRHII EFQNESDSTEDFIEGVTGDIDRGTIFTFSPKGDIIELPVGATALDFAFMVHTQVGCKCVG AKVNGRMVTIDHKLRSGDKVEIITSKNSKGPSIDWLDIVITHGAKGKIRKFLKDENKETV SKIGKDSLEKEAVKIGMTLKEIESDSTLKKHMERNNIPNMEEFYFYLGEKRSRLDILINK IKVNLEKERAASTLTIEEVLKKKEEKRKEGKNDFGIVIDGINNTLIRFAKCCTPLPGDEI GGFVTKLTGITVHRKDCPNFHAMVEKDPSREILVKWDENLIETKLNKYNFTFTIVLNDRP NILMEIVNLIGNHKINITSLNSYEVKKDGDKVMKVKISIEIKGKTEYDYLINNILKLKDV IAVER >gi|292606568|gb|ADGG01000042.1| GENE 92 97333 - 98454 1357 373 aa, chain + ## HITS:1 COG:FN1481 KEGG:ns NR:ns ## COG: FN1481 COG0343 # Protein_GI_number: 19704813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Fusobacterium nucleatum # 1 373 1 373 373 732 94.0 0 MKLAVTYKVENKDGKARAGLITTPHGEIETPVFMPVGTQATVKTMSKEELIDIGSEIILG NTYHLYLRPNDELIARLGGLHKFMNWDKPILTDSGGFQVFSLGSLRKIKEEGVYFSSHID GSKHFISPEKSIQIQNNLGSDIVMLFDECPPGLSTREYIIPSIERTTRWAKRCVEAHQKK DTQGLFAIVQGGIYEDLRQKSLDELSEMDEHFSGYAIGGLAVGEPREDMYRILDYIVEKC PEDKPRYLMGVGEPVDMLNAVESGIDMMDCVQPTRLARHGTVFTKKGRLIIKSERYKEDT APLDDECDCYVCKNYSRAYIRHLIKVQEVLGLRLTSYHNLHFLIKLMKDTRKAIKEKRFK EFKENFIKKYEGK >gi|292606568|gb|ADGG01000042.1| GENE 93 98660 - 99991 1595 443 aa, chain + ## HITS:1 COG:FN1480 KEGG:ns NR:ns ## COG: FN1480 COG2239 # Protein_GI_number: 19704812 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Fusobacterium nucleatum # 1 443 7 449 449 716 91.0 0 MEEIVELLEQNKLAELKEILINENPIDIADVFEDFPKEKYLIIFKLLPKDFSSEVFSYLS PEKQQEVIENITDDEIKFIVEDMYLDDTVDFIEEMPANIVDKILKNTSHDKRKLINQILK YPENSAGSVMTVEYISFKDNYTVKQAIDYYRKVAIDKEETDICFVTDTKKKLVGIISLKT LILSKDDSYIQNEMDTNFISVLTQDDQEEIASLFRKYDLTTMPVVDHEDRLVGVITVDDI VDVIDQENTEDIQKMAAMNPSDEEYLKESVLSLAKHRILWLLVLMISATFTGLVIKKYED ILQSAVYLAVFIPMLMDTGGNAGSQSATLVIRGIALEEIEFSDIFKVIWKELRVSILVGF ILSAVNFIRIYYFTNSSIETSLVVAISMFLTVIMAKVVGGVLPLVAKSLKIDPAIMASPL ITTIVDTAALIIFFKLSVIFLHI >gi|292606568|gb|ADGG01000042.1| GENE 94 100012 - 100599 741 195 aa, chain + ## HITS:1 COG:no KEGG:FN1479 NR:ns ## KEGG: FN1479 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 195 1 188 188 271 83.0 1e-71 MKKNLEILEKIYELRYKSGKVHLFYSINKLVGRFGNVVSLDKIYVSKEYLSYLSEKLFKD RERLTSFFGGNNKFVRLSLVQEFIQDFGRDIAQDIKDDFLEIKQYNSSVFKAVKERMAAL KENENEEISKEDIDLIQGYLTNWKKLQDKIKHFIPEEFYSQKNNYFYTSLLSYIKFLDKL NPNYEVGMKYLQAIN >gi|292606568|gb|ADGG01000042.1| GENE 95 100638 - 101207 1043 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783449|ref|ZP_06748773.1| ## NR: gi|294783449|ref|ZP_06748773.1| stress response protein Nst1 [Fusobacterium sp. 1_1_41FAA] # 1 189 1 189 189 148 100.0 1e-34 MKKGIFAMFILVASMAMVACTSSSTVKEGATNEENQALKLLEKRREYYKAQDKEKAKLEA EAKKAQEEEARKIEERIKKEAAQAEEEARKAQEEARLEAEAKEKAMLEAKRAEEEAKLQA AKTEEEAKKAQEKAIEEAKRAEEEARLQAAKAEEEARKAQEKAIEEAKRAEEEAKLEALK VLEKKRKEN >gi|292606568|gb|ADGG01000042.1| GENE 96 101300 - 101509 257 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783450|ref|ZP_06748774.1| ## NR: gi|294783450|ref|ZP_06748774.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 69 1 69 69 79 100.0 9e-14 MKLSKEEVKELFEQRTEEYLLNYNTTLQELKERTLKLFDEKNNPIILEKYLELIYGLNSD ILEILEEKN >gi|292606568|gb|ADGG01000042.1| GENE 97 101549 - 102775 1961 408 aa, chain - ## HITS:1 COG:FN1106 KEGG:ns NR:ns ## COG: FN1106 COG1760 # Protein_GI_number: 19704441 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Fusobacterium nucleatum # 1 408 1 408 408 801 93.0 0 MDTLKEFFKIGAGPSSSHTIGPERATKRVKEKFPDADSYIVELWGSLAATGKGHYTDKII IETFKPIPVEIIWKPEFVHELHTNGMKFIALDKDKEEIGEWVVFSVGGGTIRDYDELMDK SPKKEVYPLNSMKEIIKWCKDNNKHLWQYVEECEGPSIWQHLRFIDQAMTDAVQRGLEKE GDVPGPFKYPKRAREMYDKALSKRASLVFTNKIFAYALAVSEENASMGQVVTAPTCGASG VVPGVLRAMKEEYELVEKHILRGLAIAGLVGNLVKYNATISGAEAGCQAEVGTACSMAAA MATYFMGGSIDQIEYAAESAMEHHLGMTCDPVGGYVIIPCIERNAICAVRAVNTAVYCMS TDGKHTISFDEVVKTMKETGKDMCSAYKETSDGGLAKYYDKILVGNKE >gi|292606568|gb|ADGG01000042.1| GENE 98 102799 - 103296 751 165 aa, chain - ## HITS:1 COG:no KEGG:FN1105 NR:ns ## KEGG: FN1105 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 165 1 165 165 266 81.0 1e-70 MKGLEEIYLKGFSLDKYFGIASADELEKLEELYKNIVISDEFVNRIKAVNKKIPVLASVE TWCPYARVFLTTMRKINEINHIFDLSLITYGRGVSELAGYLKIHEDDFVVPTAVFFGEDF SKLRVFNGFPEKYHNDSTLETIDGTRSYLKGKFANDILEDVLSIF >gi|292606568|gb|ADGG01000042.1| GENE 99 103300 - 103884 721 194 aa, chain - ## HITS:1 COG:FN1104 KEGG:ns NR:ns ## COG: FN1104 COG0632 # Protein_GI_number: 19704439 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Fusobacterium nucleatum # 1 193 1 193 194 293 87.0 1e-79 MFEYLYGTVEYKKMDYIAIDINGVGYKVYFPLREYEKIDLGNKYKFYIYNHIKEDAYKLI GFLDERDRKIYEMLLKINGIGPSLALAVLSNFSYDKIVEIISKNDYTSLKKVPKLGEKKA QIIILDLKAKLKNLTYTEVETISIDMLEDLVLALEGLGYTKKEIDKTLEKVDLSAYSSLE EAIKGILKNMKIGG >gi|292606568|gb|ADGG01000042.1| GENE 100 104034 - 104858 1227 274 aa, chain - ## HITS:1 COG:FN0774 KEGG:ns NR:ns ## COG: FN0774 COG2849 # Protein_GI_number: 19704109 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 26 271 3 248 248 150 38.0 2e-36 MKKVMLLLFAFCSFLAYSAKTVDYQEVDKYIRQKLDRDKEITFTYKVNQADFTLEGYSDG KLTAVTDLKSNPAQAAMDGMKSVVSEKNGKLNPEYKIFAADGKLLSEQKFKLNKSIRLFD TANIMAYLDGDIPYDDRLMELFNAVDTMETIGYHPNNVKYIKNIYVNHKNNTVKIEVKDY RENPMMLQIANIDIKTLSGKTEYFYPNGKLFSTMNVKNGVLDGEAKLYYENGKLKFTATN KNGKMNGIVTTYSEDGKVTKQIELKDGEIVREIQ >gi|292606568|gb|ADGG01000042.1| GENE 101 104938 - 105663 1090 241 aa, chain - ## HITS:1 COG:no KEGG:FN1358 NR:ns ## KEGG: FN1358 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 11 241 1 233 233 269 62.0 7e-71 MTKVSEFLEKMYEEPSLELENEMLEEIIMKANFLSYINRPDNGKTDVFSINMLLTDDKKL YLPVFTDVEELAKWGIPEEMDTIELSFDNYSEIILDHPHDIEGLVINPFGNSYIISEEWL SELRTMKEERLKVRELKIPVNSKILLNEPEKFPTMLAEEITKCCDKIGAINRLWLLEMTT EKDESWLLVVDFKGDKNEIFSEINDAARNYLGMRYLDMIAYDDEFAKKSVENHKPFYDKT K >gi|292606568|gb|ADGG01000042.1| GENE 102 106015 - 107247 1586 410 aa, chain - ## HITS:1 COG:FN1826 KEGG:ns NR:ns ## COG: FN1826 COG0826 # Protein_GI_number: 19705131 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Fusobacterium nucleatum # 1 410 1 410 410 794 96.0 0 MIFLKKAELLAPAGNMEKFKMALHYGADAVFMGGKMFNLRAGSNNFSDEELEEAVNYAHE RGKRVYVTLNIIPHNDELDALPDYVKFLERIGVDGVIVADLGVFQVVKENSDLNISISTQ ASNTNWRSVKMWKDMGAKRVVLAREISLENIKEIREKVPDIELEVFVHGAMCMAISGRCL LSNYMTGRDANRGDCAQACRWKYSLVEETRPGETMPVYEDEHGTYIFNSKDLCTIEMIDK ILDAGVDSLKIEGRMKGIYYVSNCVKVYKDALNSYYSGNFEYNPEWRNELESISNRSYTE GFYHGKAGKESLNYNNRNSYSQTHKLVAKIEKKLSDNEYLVAIRNKLFVGQTVQIVSPEI KVRDFVMPEMILLDKMGRETESVESANPNSFVKIKTDIPMNELDMLRIVL >gi|292606568|gb|ADGG01000042.1| GENE 103 107262 - 108605 1592 447 aa, chain - ## HITS:1 COG:FN1827 KEGG:ns NR:ns ## COG: FN1827 COG0305 # Protein_GI_number: 19705132 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Fusobacterium nucleatum # 1 447 1 446 446 651 80.0 0 MEFEELNRIPYSLEAERALIGGIFFDVNSLDEIKYIIKANDFYKKEHIEIYKAIEELFSE GRGVDPILVVEEIKKSNLKNEEEILQELTEIIDENTSSYNLLEYAELIKEKAMLRRLGQV GMEITKAAYTDVRTAEEIMDEAEAKVLKLSKNILKNSIVDMKTASVEEMKRIDNVERNRG KTLGISTGFIDLDRMTSGLNNSDLIILAARPAMGKTAFALNLALNAAKEQKKVLIFSLEM PVQQLYQRLLAMESGISQNKLRNVYLEGDEWTKLTLATTSLSNLNIYVADLPHTNVLEIR SYARNMKAQGLLDLIIIDYLQLINGTGKGRGSEASRQQEISDISRALKGLARELDVPVIA LSQLSRAVESRVDRRPMLSDLRESGAIEQDADIVAFLYREEYYIPDTENKGITELIIGKH RNGATGTVKLNFLSEFTKFTSYTDQVK >gi|292606568|gb|ADGG01000042.1| GENE 104 108616 - 109065 722 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739477|ref|ZP_04569958.1| LSU ribosomal protein L9P [Fusobacterium sp. 2_1_31] # 1 149 1 149 149 282 100 6e-75 MAKIQVILLEDVAGQGRKGEIVTVSDGYAHNFLLKGKKGVLATPEELQKIESRKKKEAKK LEEERNKSLELKKILEAKTLNLSVKAGENGKLFGAITSKEIASHIKDELGLDIDKKKIEA NIKALGPDEVVIKLFTDVKAVVKINVVAK >gi|292606568|gb|ADGG01000042.1| GENE 105 109086 - 109916 603 276 aa, chain - ## HITS:1 COG:no KEGG:FN1829 NR:ns ## KEGG: FN1829 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 276 1 279 279 196 55.0 8e-49 MAIVSVLMSAATIVLYFFLSLFLPFLTYLIPYYKITKVNLYKKKYSLAVNIIVALILVSI NPGYLVLYLIFPYAMEFMFYLFNKIAKRMQVFNRIVLMSIVPTILISLYLYSNMDRINYM VTNLPRMKNIVEQIGIENISILQDSIALVSNYYIFGAFFVVIVSYFFLFLNLIPSTYKLW KISCYWLIPYMLILWAHKYSISSNLLIENNILECIKWMYVLYGIKVIYSLLDRIGVKVNI IKHAISMIIGLSYPPFVFILGALVSFEVIEVKEIKI >gi|292606568|gb|ADGG01000042.1| GENE 106 109930 - 111378 1542 482 aa, chain - ## HITS:1 COG:FN1830 KEGG:ns NR:ns ## COG: FN1830 COG2812 # Protein_GI_number: 19705135 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Fusobacterium nucleatum # 1 482 1 484 484 719 81.0 0 MHITLYRKYRPSSFSEVSGENEIVKSLKLSLKNKSMAHAYLFSGPRGVGKTTIARLIAKG VNCLNLGEDGEPCNECKNCKAINEGRFSDLIEIDAASNRSIDEIRSLKEKINYQPVEGLK KVYIIDEAHMLTKEAFNALLKTLEEPPSHVMFILATTELDKILPTIISRCQRYDFKALDI EDMKSGLKHILKEENLSMSDEVYPLIYENSSGSMRDSISILERLIVTANGNEINLKIAED TLGVTPSSRIKIFLDKLLNESEYNIINELEALANESFDIELFFKDLAKYCKNAIVKNELD IDKGLKIISTIYDVINKFKFEDDKKLVGYVIVADILANSTQTIVRTVTKVQKVTEDMDHT LVEAVKEKPKVKITIADVKSNWNSILSEARNKRISYKVFLMGAEPIKVENNSILIRYDKK YLFSKEQMESEEYNKEFTEIVRKFFNEDSLALKYEVIGQKKEEESGEEEFFKKIENYFKG NS >gi|292606568|gb|ADGG01000042.1| GENE 107 111382 - 112776 1855 464 aa, chain - ## HITS:1 COG:FN1831 KEGG:ns NR:ns ## COG: FN1831 COG2204 # Protein_GI_number: 19705136 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Fusobacterium nucleatum # 1 464 1 464 464 751 89.0 0 MLLLGLRLDNDLKLEFENNFENDLVFVENMISFMDAIKNRKYEAIVIDERNSKEEALISL ITKITELQKKVVIIILGEASNWRVIAGSIKAGAYDYILKPEIPKNIVKVVEKSVKDYKGL VEKVDKTKSTGEKLIGRSKLMIDLYKVIGKVANNSAPVLVTGERGTGKTSVAKAIHQFSN VHDKPIISVNCNSYRENLLERKLFGYEKGSFEGAAFSQYGELEKAEGGILHLANIESLSL DMQSKILFLLEENRFFRLGGMEPINAFVRIIASTSVNLEELIDKGLFIDELYRKLKVLEI NIPNLRDRKDDIPFIIDHYMPECNREMEKNIRGVTKMALKKLLRYDWPGNVNELKNAIKY AVAMCRGSSILIEDLPPNVIGEKAITSKEEIRALSIENLIKNEISQLKSKNKKSDYYFEI ISKIEKELIKQILEITNGKKVETAEILGITRNTLRTKMNYYDLE >gi|292606568|gb|ADGG01000042.1| GENE 108 112790 - 113746 1166 318 aa, chain - ## HITS:1 COG:FN1832 KEGG:ns NR:ns ## COG: FN1832 COG0810 # Protein_GI_number: 19705137 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 173 318 89 234 234 221 84.0 1e-57 MKKSDYICLFLSIVINIGIVLALAIFSKDTQEIIDAEQIKIGLVAVENDASTKFKGKKNV DAKKQNLDADSIEKKEEKTEKPEKPTEKKVEEIKTEKTVEKITEKPEKKAAEKLAEKPKE KTPEKPKEKPIEKKVEKLAEKGEKVVEKKDEKKAPEKPTTKENSKKSSSEKPSLADLKKQ ISGSQPKTSNGGYSPTEDPDGEEIVDRVLQNVTYSNGLVSGSKMGNSSDGRVVDWNAKNK APEFPQAAKSSGKHGKLKIKLKVDKMGNVLSFVIVEGSGVPEIDAAVERVVGTWRVKLMK NGKPVNGTFYLNYNFDFK >gi|292606568|gb|ADGG01000042.1| GENE 109 113755 - 114195 368 146 aa, chain - ## HITS:1 COG:FN1833 KEGG:ns NR:ns ## COG: FN1833 COG0848 # Protein_GI_number: 19705138 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Fusobacterium nucleatum # 34 142 1 109 114 150 81.0 5e-37 MKLDRIKRRSGGTLILEITPLIDVVFLLLIFFMLATTFDERSAFKIELPKSTVAKTKSTL KEVQVLVDKDKNVYLKYTNNSGKSETEELDLSSFVEFVSEKLETSESKDVVVSADKDIDY GFIVEIMSLLKEAGASGINIDTNSTK >gi|292606568|gb|ADGG01000042.1| GENE 110 114208 - 114819 652 203 aa, chain - ## HITS:1 COG:FN1834 KEGG:ns NR:ns ## COG: FN1834 COG0811 # Protein_GI_number: 19705139 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 17 203 1 187 187 311 87.0 7e-85 MQILKAGGILMYFILLMGIVGLYAILERFSYFALKERNNYSKLPSEAKQLIKEGKIKEAI IFFNSNKSSTSTVLKEILIYGYKENKETLSALEEKGKEKAIEQIKHLERNMWLLSLAANA SPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYTTAGGLFVAIPCMIFYNYFN KRIDLVVTDIEKTCTELLNYFRE >gi|292606568|gb|ADGG01000042.1| GENE 111 114847 - 115227 581 126 aa, chain - ## HITS:1 COG:no KEGG:FN1835 NR:ns ## KEGG: FN1835 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 126 1 121 121 130 73.0 1e-29 MSKKLLAIFLLLGVLTYAEDNNTSVIINDSAQKATDNGEVITTEVTRKVIGENNQQLDVK EIDTEELILQNQNLESSSVNITGENLKENGDKVKVNRENTATIEEELSQGVEKKGFFRRM LDKIFG >gi|292606568|gb|ADGG01000042.1| GENE 112 115256 - 118066 3450 936 aa, chain - ## HITS:1 COG:FN1836 KEGG:ns NR:ns ## COG: FN1836 COG0457 # Protein_GI_number: 19705141 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 936 1 936 936 1199 81.0 0 MRKFLIISLLASSSIIFAGEAEDFKIVNELYKEKNFKSALIESEKFLAKYPESKHQKSMR DKVGKIYFLEKDYKKAEEVFKKLFVMEEKKSEKDEYSSYLARANALQNKTDEARFYLREI KNEKTYQKTLFAVGQDFLSKDNNEAARDVYREIIDKKYENNKEAMMGLGIVNYNLKDYDK AIYWLSEFQRAKPKENKDMVSYLKASAFYRKGNTEQAIEDFEKLANISPANDYSKKAVLY LIEIYSNKKDEEKVSFYLEKIKGTKEYNTAMTMIGDLYVTKENYDKALAYYNQSDDKNNP RLIYGEAYSLYKSGKYEAALKKFQSLKNSDYYNQSIYHIFAINYKLKNFDEIIRDREIIR KVVVSQVDTDNIIRIIANSAYQVGNYKLAKDYYGRLFAVSPDKDNLFRVILLDSQMLDME DLQIRFNQYNKLYSDDTEYKKDVYLYTGDAYYKAGQVERAEQIYKAYLSQHTNTEIISSL MSSLLDQQKYDEMNQYLSSVSDDNSLNYLKGVAAMGLKKYDEAETHFQNVLSSGDQGLST KVYLNRVRNFFLAERYNEAIQAGEQYLTRINPDKEKAIYSEMLDKIGLSYFRVGKYDQAR SYYSKIASMKGYEVYGKFQIADSYYNEKNYAKAGELYKAIYNNYGETFYGEQAYYKYITT LSLLGNTDAFEREKNNFLSVYPNSNLRTTISNLSTNFYIESGDTEKAIEALDKSKANTDD ADVKENNTIKIIGLKLEKKDYKDMEKYLGEIADSEERAYYSAQYYAQKKDPKLVKEYETL LKSEKYKAYASKALGDYYFDKKDLAKAKKYYGTHVSVNKNPDEYVLYRLGQANEKENNLK IALADYKLVYEKKGKLAEDAMLRAAEIYDRQENNVEAEKLFTKLYATKGNKDLKAYSIEK LIYYKLLNEKTKEAKKYYDELKKLDAKRAEKFKAYF >gi|292606568|gb|ADGG01000042.1| GENE 113 118079 - 118555 568 158 aa, chain - ## HITS:1 COG:FN1837 KEGG:ns NR:ns ## COG: FN1837 COG1852 # Protein_GI_number: 19705142 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 158 18 175 176 226 79.0 2e-59 MLTTKFKNPKLNNYFSQKFLELNNKYVLKKIKKKTNDKILILLPHCIQLYDCEYKITADI NNCRVCGKCVVYNFVDIKNKYEKVDVKIATGGTLARKYVKDLRPDLIIAVACKRDLISGI RDAEPFLVYGVFNRIKNEACINTTVAIEDIYAILEEIN >gi|292606568|gb|ADGG01000042.1| GENE 114 118755 - 119552 851 265 aa, chain - ## HITS:1 COG:CAC0432_1 KEGG:ns NR:ns ## COG: CAC0432_1 COG4936 # Protein_GI_number: 15893723 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Clostridium acetobutylicum # 9 175 13 177 177 114 36.0 2e-25 MKFKVTTDNFLDIEFFQTLQDRFAEEFGIASIITDVNGVPLTKPSNFTEFCIKHVRGCEE GLKKCQFFDAYGGCKAKINKEPIIYRCHAGLTDFASPIILGETQVGCFLCGQVLTEKPNE DEFRDYAKQLKIDEDEYIEALRKVKILPYERIEYIADFLYKISSKMSTFIFYQNMGLSAN KFYKNIIDEFHRQLESNKDNKLESQKNSLKNILNKISETLKGDYEINEKELVRIDKMSDD VSEKFSSIIKNIQETIKNFKKFDIS >gi|292606568|gb|ADGG01000042.1| GENE 115 119565 - 120236 623 223 aa, chain - ## HITS:1 COG:ECs0449 KEGG:ns NR:ns ## COG: ECs0449 COG0745 # Protein_GI_number: 15829703 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 3 220 4 223 229 112 31.0 5e-25 MIKLLIVEDSEETVDLIKLILSNETDIKILDASTIKDGMNLVKKDIFDIILLDLSLPDGN GTYICEQVRKFPELYGKPFIVALTADTSQESVNKNLELGCDDYIKKPFDTQELLIRLKKF IKRLPQNKEVITYDSIKLFLTNKTALYNEEFIDLSKNEFEVLHYFIINKGLLLTRVNILD NVWKENLDISDKAVDQCLKRLRKKLPILNDNLVSKRGFGYILK >gi|292606568|gb|ADGG01000042.1| GENE 116 120243 - 122114 1761 623 aa, chain - ## HITS:1 COG:alr1285_1 KEGG:ns NR:ns ## COG: alr1285_1 COG0642 # Protein_GI_number: 17228780 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 139 380 212 460 483 167 36.0 6e-41 MQAHKKISIINTFFLFIFFSIFIYFFNIEISLNNILKISILIFTYYLLSIFFTKFFLLDT YKTIQKLDKILSTLHNKFINELEDNFFSLQECFNEVFSTIKLDILDILVKEEEIKKEKEK AEILSTELKELNKNLEDKVRERTKELRISKEMAESANKAKNEFLAKISHEMRTPLTPIIG YSRILAKDIEDPSYKEKLEIIHTSGVKLLNFTNELLDFSKIESGKVDLNYEPFNVRVLFQ DIYHEHIDLAEAKGIDFKIDYLHANVSIYSDKIKIYEIAKNIIHNALKYTNKGFVLCDVF VEKNTLYFNVYDSGIGISEENIANIFESFVQIGKEQSGAGLGLSITKKLLKVLNGTIEVE SKVGQGSTFKIQIPIETSQKEFENFSDVVNKLLNSNNSGIKTIFLKSILKLPLRIKDLKD AHKKQDIEEVRKINHLIKGTYGNLNLSLVYDISEKISLELKKENVSFDSVLHYIEELEYL THTLDYNELFNTYLQFKERKIKILIAEDAEETRDFLKVLLETPLIEVTCVENGLEALNML KVEKFDLVFLDISMPVMDGVQTVTTIKANDNFKDLPVVALTAHAIIGYKEKYLNYGFDAY ITKPINDSVLFSCLEKFILSEKR >gi|292606568|gb|ADGG01000042.1| GENE 117 122249 - 123358 1363 369 aa, chain + ## HITS:1 COG:FN0092 KEGG:ns NR:ns ## COG: FN0092 COG1454 # Protein_GI_number: 19703444 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Fusobacterium nucleatum # 1 368 1 369 372 273 42.0 3e-73 MKIFEANTEIHIGDKFEEAISKIKAKKAFIVTDSIMYKIGLTKKFENILKEKNIDYKVFS EVEVDPSFEVINKALDKVIDFLPDVIVALGGGSSLDTAKSIKYFIKKSNLSIPLIALPTT SGTGSEVTSYAVLTDRKNNIKIPLKDDVMFPEYAILDPELTKTLPKSVVADSGIDALTHA IESYTCKGANFYTQIYALYSIKLIFKNLFRMFNNIKDEEARVEMSKASCIAGFAFEKSGL GINHSIAHAIGGKFHIAHGKINGTILPYIIRFNSGDKTTAKRYYEIAKDLGFPASTIEEG AESLALAVELLNKSLGLPSCVKELAIDKEKYSNEINIMAKSALEDICTGGNIREVNLEDL KKLFEKVYG >gi|292606568|gb|ADGG01000042.1| GENE 118 123497 - 124306 1397 269 aa, chain + ## HITS:1 COG:lin1116 KEGG:ns NR:ns ## COG: lin1116 COG4816 # Protein_GI_number: 16800185 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 2 269 4 267 267 301 64.0 1e-81 MQENLVQKMVAEVVEKLKDKGICETPKKVESDCACASKNDCRLTEFVGLTTHGHGIGLVI ANVDSALHEAMGLDKKYRSIGIIGARTGAGPFIMAADEAVKATNTEVISIELPRDTEGGA GHGSLILFGAEDVSDVKRAVEVAINNVTEKFGDVYANSVGHIELQYTARASYAINKAFGA PLGKAFGLIVGAPAAIGVVIADIAVKAASVEVLAYSSPSKGTSYSNEAILAICGDSGAVK QAVLAAKEVGVKLLEAMGGEAPSASHPYI >gi|292606568|gb|ADGG01000042.1| GENE 119 124327 - 125991 2689 554 aa, chain + ## HITS:1 COG:lin1117 KEGG:ns NR:ns ## COG: lin1117 COG4909 # Protein_GI_number: 16800186 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Listeria innocua # 1 553 1 553 554 803 70.0 0 MKSKRFEVLSNRPVNKDGYVKEWPEVGLIAMNSPLDPKPSIVIENGKVVELDGKKRANFD LLDYFIADYGIVLKNAEKVMAMDSLVIAKKLVDINITRDEILEITLSLTPAKMAEVIGKL SVLEMMMAVNKMRARKTPSNQCHVTNLRDLPVQIAADAAEAALRGFAEQETTVAVARYAP FNAISLLIGAQAGRPGILTQCAVEEATELLLGMRGLTAYAETVSVYGTEPVFIDGDDTPW SKTFLASAYASRGLKMRYTSGSGSEVLMGYAEGCSMLYLECRCLFMTKGAGVQGIQNGSV SCIGVPGAVPGGIREVIGENLVAMLLDLECASSNDQTFTHSDLRRVARSLMQMIPGTDFI CSGYSSTPNYDNMFAGSNWDAEDYDDWNIIQRDLRIDAGLRPVREEEVIKVRNKAARAIQ AVFDALGFPEITDEEVEAATYAHGSKDIPERDMVADMKAASEMMERGITGIDIVKALKSK GFDDLADSLLKLMKLRVSGDHLHTSAILDKDFNVISAVNDRNDYTGPGTGYQISAERWAE LSDIQNAADASKIK >gi|292606568|gb|ADGG01000042.1| GENE 120 126009 - 126683 879 224 aa, chain + ## HITS:1 COG:mll6722 KEGG:ns NR:ns ## COG: mll6722 COG4909 # Protein_GI_number: 13475607 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Mesorhizobium loti # 51 223 578 751 756 123 43.0 3e-28 MQLNDKDIRSIVEEVVKRYLNSSENSEVKSTPVVTRAEERVGNKLELIDEGQAQKGTRSD EVIIAVAPAFGIYQTETITHIPHADVLKEIMAGIEEEGLVPRVIRVLRTSDVSILANDGA KLSGSGIGIGLQSKGTAVIHQKDLFPLTNLELFPQAPLIQREHYRMIGKNAAKYAKGESP KPVPQMNDQMARPKYQSIAALLHIKETEHVKVNAKPVQLKVVFK >gi|292606568|gb|ADGG01000042.1| GENE 121 126697 - 127206 808 169 aa, chain + ## HITS:1 COG:STM2042 KEGG:ns NR:ns ## COG: STM2042 COG4910 # Protein_GI_number: 16765372 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, small subunit # Organism: Salmonella typhimurium LT2 # 1 169 1 172 173 152 52.0 3e-37 MDQELLEKMVKEVMASLAGNNTVNNEESPRSTNRVNRQDYPLSIKRAELVKSATGKKLED ITIENVMSGKIGAEDCRIAPETLEMQAQIAESVGRHAFARNLRRAAELIAVPDTRVLEIY NALRPYRSTKAELLAIADELENKYNAKVNAQLVKEAAELYEKRDRLRKD >gi|292606568|gb|ADGG01000042.1| GENE 122 127228 - 129042 2414 604 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2102 NR:ns ## KEGG: CLL_A2102 # Name: not_defined # Def: glycerol dehydratase reactivation factor large subunit # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 603 1 607 612 723 65.0 0 MKLIVGIDIGNATTESTLAEVDGENIKVIGSSIEKTTGIKGTKENIKGVYQSLHKLFEKT GTSLDELSLIRINEAAPVIGDVAMETITETIITESTMIGHNPSTPGGIGVGVGISVLLNE IDDSYINKDVIALVPESIDFESAAFKINQLTAKGINIKGAIMQRDDAVLVNNRLDHKIPI IDEVLHFDRIPMNMLTALEVADKGKVISMLSNPYGIATLFNLTSEETKMVVPISRALIGN RSAVVIKTPKGDVKSRVIPAGSIHIEGQMKNRVVSLDNGAEAIMTVLEQCYPVIDVWGEK GTNAGGMLERVRIVMAQLTNQDPKNIKIQDLLAVNTFVPQKVKGGIAEEFSMENAIGLAA MVKADKLQMEMIATELQNKINKKVVVGGVEAEMAIIGALTTPGTAKPLAIIDMGAGSTDA SIMTTDGTISSCHLAGAGNMVTLLIDKELGINNIELSEDIKKYPLAKVESLFHIRHEDGS VEFFEEALNPSVFARVVILKEGAMIPLDSNQSLEKIKNVRREAKEKVFVTNTLRALKKVI PSGNVRDIDYVVLVGGSALDFEIPQMVTEALSHYGVVAGKGNIRGVEGPRNAVATGLALS YKGE >gi|292606568|gb|ADGG01000042.1| GENE 123 129042 - 129419 505 125 aa, chain + ## HITS:1 COG:no KEGG:CPR_1008 NR:ns ## KEGG: CPR_1008 # Name: dhaG # Def: glycerol dehydratase reactivation factor, small subunit # Organism: C.perfringens_SM101 # Pathway: not_defined # 33 122 23 113 116 75 51.0 5e-13 MTISLRERLMNEEKNPIAINIYYNKNLAIDKRIKTILCGIEEEEIPFILIPDDGDDVKVL GDKAAKSSKLGVGIGISSNRVTLYQEKLSIEKPLFECSLNSSDYILRAIGTNGARLIKGN PFIII >gi|292606568|gb|ADGG01000042.1| GENE 124 129454 - 129900 820 148 aa, chain + ## HITS:1 COG:lin1142 KEGG:ns NR:ns ## COG: lin1142 COG4577 # Protein_GI_number: 16800211 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 3 139 4 129 165 62 40.0 4e-10 MLEALGLIEVVGLVGAIEAADTASKAADVKVIGYELTKGSGMVLVKIVGGVSAVKSAVDA ASMAAERISQVVSKLVIARPSDELDKIINTEKKEVKEEVKEEVVVEEITEEVVEEVVETN ENDEVSEILEEIKETQVTKNNKKNKNKK >gi|292606568|gb|ADGG01000042.1| GENE 125 129920 - 130198 613 92 aa, chain + ## HITS:1 COG:lin1123 KEGG:ns NR:ns ## COG: lin1123 COG4577 # Protein_GI_number: 16800192 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 89 1 89 91 115 86.0 2e-26 MSNALGMIETKGLVGAIEAADAMTKSANVELVGYEKIGSGLVTVMVRGDVGAVKAAVDAG AAAAERVGEVKSVHVIPRPHTDTEKLLPKLDK >gi|292606568|gb|ADGG01000042.1| GENE 126 130212 - 130832 915 206 aa, chain + ## HITS:1 COG:TM0375 KEGG:ns NR:ns ## COG: TM0375 COG4869 # Protein_GI_number: 15643143 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Thermotoga maritima # 20 204 23 208 210 198 55.0 6e-51 MKDIRGIIKEVLEEIISDDVVIGVSNRHIHLSQKDLDVLFGKDYKLSKMKDMKQPGQFAT NEKVDIIGPKGKFTGVRIIGPVRKETQVEISITDSFKLGLTPPIRQSGDLEGTPGIKIVG PMGEIEISKGVIVAGRHIHMPKYIADIRGYKDGEIVKVETYGERKIIMCNVVLRVSDKMA KEMHIDVDEANAAALKNNDYVKIIRE >gi|292606568|gb|ADGG01000042.1| GENE 127 130846 - 131556 856 236 aa, chain + ## HITS:1 COG:no KEGG:TherJR_0627 NR:ns ## KEGG: TherJR_0627 # Name: not_defined # Def: flavoprotein # Organism: Thermincola_JR # Pathway: not_defined # 1 231 1 243 248 80 29.0 5e-14 MELDKIIEYIVQEVVKKINSQNIIEEFSPKEKILVAITGSTNNLEQIVLELRKISKNYDL SLVFSEAAKNIIDENVFSEFHIIKDFSIKNYDEILSKNDIILLPLLTKNTVAKLVVGIRD NAVTNLVSKALLLEKRVIAAYDSCIVNNEVPYAKLINSNVEKLKDYGLIFVQAKELADYM LNKKDLEINSLREKNVIAAKDLKDLYNKKIIISKNTVVTTLAKERAKENNIVFEEK >gi|292606568|gb|ADGG01000042.1| GENE 128 131576 - 131845 489 89 aa, chain + ## HITS:1 COG:lin1127 KEGG:ns NR:ns ## COG: lin1127 COG4576 # Protein_GI_number: 16800196 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 88 1 87 87 72 48.0 3e-13 MFLAKIVGKIVSVTKNEGLHGKKILIAVPINMNDEVIGGEIISLDNVGAGIGDKVLIANG DVARFAFDDVKDYPIDSAIISIVDSVEQS >gi|292606568|gb|ADGG01000042.1| GENE 129 131855 - 132796 974 313 aa, chain + ## HITS:1 COG:STM2050_2 KEGG:ns NR:ns ## COG: STM2050_2 COG3193 # Protein_GI_number: 16765380 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Salmonella typhimurium LT2 # 183 309 18 146 153 85 41.0 1e-16 MNINLIKNYIEKADFDENIIFNTDINTALEKSISNNIDEVIELIRKVDKFIDNQDFSNIL KELSKNFLLIKDRKNISFETKNIESCTLKYSNVLSLDDEYKIPEENEEVLMAYLLYIITK KIQRRFNFLSKNREIKVELLDYISKSRDFFHIMYKFLQEKVMIKYVVELISEKLSSMEID SNLSLEKARKIIRAGQKKAKEMNLAAVFAVVNSEGNLIIEERMDNAILVSVEVAYKKAYT AAALKLNTADLTPLVQPGAMFYGLQSDPKYIVFGGGMLLKVDGKIVGAVGVSGGSAQEDM EIAKACVDAFETI >gi|292606568|gb|ADGG01000042.1| GENE 130 132812 - 134209 945 465 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 3 465 1 474 477 368 43 1e-101 MELEVKNIEEIVDLIMKKMTESNVAVSYDSKNGVFDDVDVAIAEAKKAQTVLFSSKLELR ERIIASIRETMRAHITELSELAVKETGMGRVKDKEQKNRVAIDRTPGLEDLKAFAFSGDD GLTVMEFSPYGVIGAITPSTNPSETVICNSIGMIAAGNAVIFAPHPGAKRTSIRAVELIN EAIKKVGGPENLVVTISEPSIENTEKIIANPNIKMLVATGGPGVVKTVMSSGKKAIGAGA GNPPVLVDETADIEKAAKDIIDGCSFDNNLPCTAEKEVIAVDSIVNYLIFEMQKNGAYLL KDKELIEKLVSLVLKNNSPDRKYVGKDAKYILKQLGIEVGDEIRVIIVETDKNHPFAVEE LLMPVLPIVKVKDALEGIKVAKELERGLRHTAIIHSKNIDILSKYAREMETTILVKNGPS YAGIGIGGEGHVTFTIAGPTGEGLTSARSFARNRRCVLVGGFSIK >gi|292606568|gb|ADGG01000042.1| GENE 131 134313 - 135044 1329 243 aa, chain + ## HITS:1 COG:FN1838 KEGG:ns NR:ns ## COG: FN1838 COG0580 # Protein_GI_number: 19705143 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Fusobacterium nucleatum # 1 243 12 254 254 348 89.0 7e-96 MSNMSMYIGEFVGTTLLLLLGNGVNMTCSLKHSYGKGAGWIVTTFGWGFAVMIPAYITGW VSGAHMNPALTIALAVTGKFPGALVPGYIVAQMLGGIAGATLAYLVYKVQMDEEPEAGVK LGVFSTGPSIDAPIWNIVTEIIATALLLIGVLAIGYGEVGIQSGNGALFVGLLIVLLGMA TGGATGYALNPARDLGPRIAHAILPIKGKGGSNWKYSWIPVVGPTIGAILGVVIFDAFLA AVL >gi|292606568|gb|ADGG01000042.1| GENE 132 135135 - 135620 857 161 aa, chain - ## HITS:1 COG:FN2085 KEGG:ns NR:ns ## COG: FN2085 COG3212 # Protein_GI_number: 19705375 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 161 1 161 161 209 81.0 2e-54 MKKILIVGAIILGSIGFSTSALAAISEQQAKDIALKEAQGGQITKFKLDREKGRMVYEVE VMDGNIEKDYEIDAETGAIVKFEQEQKGAGKAKSVNEPKISYEKAKEIALKNSKNGKFKE IELKHKNGVLVYDVEIAEGFADKEFLIDANTGEILREKKDF >gi|292606568|gb|ADGG01000042.1| GENE 133 135985 - 136758 647 257 aa, chain + ## HITS:1 COG:FN1844 KEGG:ns NR:ns ## COG: FN1844 COG0300 # Protein_GI_number: 19705149 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Fusobacterium nucleatum # 1 257 1 257 257 398 83.0 1e-111 MKKILITGASSGIGKELAINLTDKTDELFLLARSIDKLELLKKDLEEKNPSLKCECIKYD LSDIENLDKIIENYDIDLLINCAGFGKITDFSKLSDKEDLDTINVNFISPMLLTKKYSEK FLQKGQGIILNVCSTAALYQHPYMAIYSSTKSALLHYSLALDEELHNKNKNVRVLSVCPG PTASNFFDKDIQAKFGSSQKFMMSSEDVAKRIIKIIEKKKRFSIIGFRNKLSMFLLNLLP ASLQLRLVGLVLKKVIK >gi|292606568|gb|ADGG01000042.1| GENE 134 136755 - 137951 839 398 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1741 NR:ns ## KEGG: Lebu_1741 # Name: not_defined # Def: ceramide glucosyltransferase # Organism: L.buccalis # Pathway: Metabolic pathways [PATH:lba01100] # 1 398 1 392 392 548 76.0 1e-154 MIDLFYFLLTITIILLILKLIFSFAYFYKLDRLEKSQIDEKKYTVLQPILSGDPRLEEDL KANLKNTIDMNFIWLVDKSDKVAIDTVENILKDKNYSNRIEVYYLDDVPQELNPKIFKLA QVVDKIKTEYSIILDDDAVIDRKKLDELSVYEKDKSEWIVTGIPFNYNIKGFYSKLISAF INSNSIFSYFSLSFLKENKTINGMFYILRTDILKKYSAFDEIKYWLCDDLALATYLLSKK VKIIQSTIFCNVRNTVPSLKRYILLMKRWLLFSNVYMKNAFSVKFLFIILLPTLLPTILL FFSFYLGIDYLVIVLNLFIGKIALFHITRIFIYQGNYEENSSKKSLFTFSPQTTEILYEL LSEFLLPFMLIYTLLTPPVILWRNKKIRVKDGKIHYEI >gi|292606568|gb|ADGG01000042.1| GENE 135 137926 - 138567 748 213 aa, chain + ## HITS:1 COG:no KEGG:FN1846 NR:ns ## KEGG: FN1846 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 6 210 1 205 208 337 88.0 2e-91 MGRYTMKFKEYLEKLESLDISKTLLKEDKIVFVISGSSNLKTAALEPDRFEILNIFKEFG YKVINSNFPYNEDFPYNEFEDINILEASLSNIIYYPHTLFNKKFEKEILRHLEPIKSLKD VIIISQSSGLNVWKKFMELSGFNNENIKMFALGPVGKGYGKLNNVVVLKGIFDIYSWLLD FHKFDKIVNCGHLGYFKDRKVKEIIYEYLQRKN >gi|292606568|gb|ADGG01000042.1| GENE 136 138542 - 139819 1321 425 aa, chain + ## HITS:1 COG:YPO1985 KEGG:ns NR:ns ## COG: YPO1985 COG1819 # Protein_GI_number: 16122227 # Func_class: G Carbohydrate transport and metabolism; C Energy production and conversion # Function: Glycosyl transferases, related to UDP-glucuronosyltransferase # Organism: Yersinia pestis # 10 364 15 367 395 204 34.0 3e-52 MNTYKEKIKIAVVAPPFSGHLYPILELVLPLLNKKDKYDICVYTGFKKKEVVERLGFPVK ILLEDRPDVFENISDTDKKTNPIIAYKQFKENLGLMPKIIKEMEDYFSEEKPDIIVADFI AVPVCFVSKKLNIPWITSIPTPFAIENKTTSPAYVGGLYPRDSFIFKLRDKFARRFIRTF KKLLCFILRKQLKELDFILYNEKGEENIYSPYSILALGMKELEFRDDFPSQFSWAGPCCS SLFKDSAKFEFETKFEKIILLTKGTHLKWAKNSIIDIARELSQKYPNYLFVVSLGSYLER EKEIIKEKNLQIYHYLDYDEILHKVDYVIHHGGAGILYSCIKHNKPAVIIPHDYDQFDYG VRADLAEIAFVANLKSRKSILKAFDKMLERKEWRNLEKLSKAFNSYSPSDLLEKEIDRIL KGVEK >gi|292606568|gb|ADGG01000042.1| GENE 137 139816 - 140799 1005 327 aa, chain + ## HITS:1 COG:FN1847 KEGG:ns NR:ns ## COG: FN1847 COG0451 # Protein_GI_number: 19705152 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Fusobacterium nucleatum # 1 327 2 328 328 582 90.0 1e-166 MKILLTGATGFLGKYVIDELKNNSYQVVAFGRNEKIGKTLIDENVEFFKGDIDNLDDLYK ASQDCSAVIHAAALSTVWGLWEDFYNVNVIGTKNIVQVCEEKKLKLVFVSSPSIYAGAKD QLDVKEDEAPKENDLNYYIKSKIMAENIIKASNLDYMIIRPRGLFGIGDTSIIPRLLELN KKMGIPLFVDGKQKIDITCVENVAYSLRLALENKEHSREIYNITNGEPIEFKEILTLFFN EMGTEGKYLKWNYNLVLPLVSFLEKVYKLFRIKKEPPITKYTLYLMKYSQTLNIDKARKE LGYSPKMSILEGVKNYVEHSKKNDRKS >gi|292606568|gb|ADGG01000042.1| GENE 138 140762 - 141583 705 273 aa, chain + ## HITS:1 COG:FN1848 KEGG:ns NR:ns ## COG: FN1848 COG0491 # Protein_GI_number: 19705153 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Fusobacterium nucleatum # 8 270 1 263 263 434 82.0 1e-122 MSNTAKKMIERVDYFTCGYCTNDLKRVFKGFDKTIVNFNAGVFLIKHKEKGYILYDTGYS MDILKNNLKYFLYRFANPITLKKEDMIDYQLKEKGISPDEIKYIIISHLHPDHIGGLKFF PNSYLILTKTCYNDYKLKRDSLLIFDELLPEDFEKRLIIIDDYKENTQFPYRESCDLFSD LSMFLVEVSGHTKGQACLFLPEDNLFLAADVCWGTDFLPFTEKMKWLPRKIQNNFEEYKK GTSLLEKLIEDKISVIVSHDKKEKIIDILKTIE >gi|292606568|gb|ADGG01000042.1| GENE 139 141862 - 143136 1446 424 aa, chain + ## HITS:1 COG:FN1849 KEGG:ns NR:ns ## COG: FN1849 COG1541 # Protein_GI_number: 19705154 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Fusobacterium nucleatum # 1 422 1 422 424 693 87.0 0 MNKILKIVSTFIKVRYFSKWTSRDKLLKYQDEQVEKHFKFLKENSPYFKTHQITDDFTMN KAFMMENFDKLNTLGVKKDEAMEIALNSEKTRNFSQKYKDISVGLSSGTSGHRGMFITTP EEQGTWAGTILAKMLPKNDIFGHKIAFFLRADNDLYKTINSFLISLEYFDTFKDIDEHVE RLNKYLPTMIVAPPSLLLVLAKKIEEGKLKVSPRRLISVAEILEKADEEYIKKQFNLKII HQIYQATEGFLACTCEYGHLHLNEDLIKFEKQYIDEKRFYPIITDFRRTSQPFVKYYLND ILVENNEPCECASVLQRIEKIEGRSDDIFKFTNKFGKEIVVFPDFIRRTILFVENIREYQ VFQIDNKLLEVAILNVTDRQKELVKNEFNKLFTSLNIENIEIKFINYEIDKTKKLKRIVR KVEK >gi|292606568|gb|ADGG01000042.1| GENE 140 143133 - 144062 1266 309 aa, chain + ## HITS:1 COG:FN1850 KEGG:ns NR:ns ## COG: FN1850 COG0332 # Protein_GI_number: 19705155 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Fusobacterium nucleatum # 1 309 1 309 309 526 83.0 1e-149 MRRIKFKGYGVVLPKNTVSFKEHIRYRISEGETQLSLAVTACEKALKNSNISINDIDCIV SASAVGVQPIPCMAALIHEKIAKGTSIPALDINTTCTSFITALDTMSYLLEAGRYERVLI VSCDVASSALNPNQKESFQLFSDGAVAFVVEKSDEEIGIIDSILKTWSEGAHSTEIRGGL SNFHPKYYSESTKEEYMFDMNGKSILALCIKEIPKMFKEFLENNKMKVSDIDMVVPHQAS VAMPVVMQKLGVPKGKFIDEVKYFGNMVSASVPMTLAHGLEQQKIKNGDIILLTGTAAGL TTNMMLIKI >gi|292606568|gb|ADGG01000042.1| GENE 141 144079 - 145386 326 435 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 237 434 1 204 207 130 40 5e-29 MLREDGRKFNEERKIKITKDVNIYAEGSVLIEVGNTKVICTASVSEKVPPFLRGTGKGWV TAEYSMLPRATNERNQREASKGKLTGRTVEIQRLIGRALRSAIDLEKLGERLITIDCDVI QADGGTRTTSITGGYVALALAIKKLLKDEILEENPLIANVAAISVGKIDSELMVDLKYSE DSVAEVDMNVIMNKKGEFIEVQGTGEESTFTRAELNGLLDLAEASIKRIIDLQDKVIEQE NLKIFLATGNKHKIDEISDIFSGIENIEILSINDGIEIPEVIEDGTTFEENSKKKAVEIA KFLNMITIADDSGLCVDALNGEPGVYSARYSGTGDDSKNNEKLIENLKGIENRKAKFVSV ITLAKPNGETFSFEGEILGTIIDNPRGNTGFGYDPHFYVEEYQKTLAQLPELKNKISHRA KALEKLKKELKNILL >gi|292606568|gb|ADGG01000042.1| GENE 142 145499 - 145927 638 142 aa, chain + ## HITS:1 COG:no KEGG:FN1852 NR:ns ## KEGG: FN1852 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 139 1 124 126 190 76.0 1e-47 MKKFLLALMLVGAVSAVAATKSAPKSQYPDGTYRGLYISKQDTEVEVQFDLKDDVITKIT YRALHYKGHDWLKEDEYVAKNDGYMKLLERITNKKIQDVMPTMYNSEEIEKGGATVREMK VRSALQYGLNLGPFRLPKKEAK >gi|292606568|gb|ADGG01000042.1| GENE 143 146100 - 146510 564 136 aa, chain + ## HITS:1 COG:FN1853 KEGG:ns NR:ns ## COG: FN1853 COG2185 # Protein_GI_number: 19705158 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) # Organism: Fusobacterium nucleatum # 1 136 1 136 136 246 92.0 6e-66 MTKKKIVIGVIGSDCHTVGNKIIHNKLEESGFEVVNIGALSPQIDFINAALETNSDAIIV SSIYGYGELDCQGIREKCDEYGLKDILLYVGGNIASSNEDWEKTEKRFKEMGFNRIYKPG TPIEETISDLKKDFKL >gi|292606568|gb|ADGG01000042.1| GENE 144 146678 - 148066 1620 462 aa, chain + ## HITS:1 COG:no KEGG:FN1854 NR:ns ## KEGG: FN1854 # Name: not_defined # Def: methylaspartate mutase (EC:5.4.99.1) # Organism: F.nucleatum # Pathway: Metabolic pathways [PATH:fnu01100] # 1 462 1 462 462 758 85.0 0 MSSRIYLSIDFGSTYTKLTAIDLDKEEIISTARAMTTVKTNVLTGFNIAFEKLTKDLKNK LKDYEIVKKVACSSAAGGLKIIAIGLVPELTTEAAKKAALSSGGRVVKTYAFRLSSEDIE EISSIDYDILLLTGGTNGGNREYILDNAKTLAENKIQKPIIIAGNEEVKEEVAKIFKSHN IEFYTSENVMPVVNKINVLPVKEVIREVFMRNIIKAKGMESIQKIVGNIIMPTPTAVMKA AEIFSKDNNDIIVIDIGGATTDIHSIGAGLPKANNIQLKGMEEPFSKRTVEGDLGMRYSA LALYEATSLNKIREYLGSKDSKINIRENFEFRHENPDFVSETEDDIIFDEMMAMLCTEIA IDRHVGTLESIFSPMGTLFVQSGKDLTDVKYVIGTGGIINNSRNPKKILDLSLYNENNPL ELKPKYPKFLVDKTYIMSAMGLLASDYPDIAYRIMKKYLVEI >gi|292606568|gb|ADGG01000042.1| GENE 145 148080 - 149537 1212 485 aa, chain + ## HITS:1 COG:FN1855 KEGG:ns NR:ns ## COG: FN1855 COG4865 # Protein_GI_number: 19705160 # Func_class: E Amino acid transport and metabolism # Function: Glutamate mutase epsilon subunit # Organism: Fusobacterium nucleatum # 1 485 1 485 485 802 84.0 0 MSITFKKIDKEDFLEMRRNFLESYKNLDDFDLDTAIRFHKSLPDYKNFQKMLEKSIQDNR IVTEAYSKETLLEDLIKNLNSLHRVGQADFLSIIIDSHTRENHYENARTILEDSIKSNKL LLNGFPLVNYGTKLARKIINDVELPLQIKHGSADARLLAEFLLLGGFSAFDGGGISHNIP FNKSVPLKDSLENWKYVDRLVGLYEENGIKINREIFSPLTATLVPPAISNSIQILETLLA IEQGVKNISIGIAQYGNITQDIASLLAVQEQIQFYLDKFSFKDIHISTIFNQWIGGFPED ELKAYSLISYSATIALFTKANRIFIKNIDEYSKNSLGNTMINSLVLTKTILDIGNSQNFN NYEEIIFEKEQIKKETSQIIEKVFSICDGDLRKAIVEAFANGIIDIPFAPSKYNIGKMMP ARDKEGMIRYLDIGNLPFETSTQEFHHNKIKERAINENREIDFQMTIDDIFAMSQGKLIN KKSRE >gi|292606568|gb|ADGG01000042.1| GENE 146 149574 - 150719 1336 381 aa, chain - ## HITS:1 COG:no KEGG:FN1859 NR:ns ## KEGG: FN1859 # Name: not_defined # Def: major outer membrane protein # Organism: F.nucleatum # Pathway: not_defined # 1 381 1 368 368 391 55.0 1e-107 MKRLALLLGSLLVVSSVASAKEVMPAPTPEPEKVIEYVEKPVIVYRDREVTPAWKPNGSV SLKYNWYGEVENKKPKEDKDGDWATSPTNAGRLEAVTNINFTEKQTLYVRTRNYHTLRDD EKQNQNSKVGSDSLRVRHFYNFGTLGDSKVKAKSRLSYDQSGGDLGAKNAEASVAFDFAN YFPSNDYFKVTKFALRPRYIYRWKGHGDNNFTRNRYELDLETSYKLPLGFSATVTVYSSY DRYRRPFRVGNDGETKKGEFRGALDATLEYSASLYKNDKFELTFDAEGGYDSYSFNQYKR YSNGDTVVLPGSTKKVAKLTNRREYSVYLLPTLNVSYKATDNVKLFAGAGAEYRNWAVQG ESVAKNWRWQPTAWAGMKVSF >gi|292606568|gb|ADGG01000042.1| GENE 147 151023 - 151679 1064 218 aa, chain - ## HITS:1 COG:FN1856 KEGG:ns NR:ns ## COG: FN1856 COG2057 # Protein_GI_number: 19705161 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Fusobacterium nucleatum # 1 215 1 215 217 393 95.0 1e-109 MEMDKNLVREVIAKRVAQEFHDGYVVNLGIGLPTLVANYVGDMDVIFQSENGCIGVGPAP EKGKEDPYLVNAGGGFITAAKGAMFFDSAYSFGVIRGGHVDATVLGALEVDEKGNLANWM IPGKKVPGMGGAMDLVVGAKHVIVAMEHTSNGAVKILKECKLPLTAVGVVNLIITEKAVF EVTDKGLVLKEITPYSSLEDIRATTEADFIVPDELLNK >gi|292606568|gb|ADGG01000042.1| GENE 148 151697 - 152350 1088 217 aa, chain - ## HITS:1 COG:FN1857 KEGG:ns NR:ns ## COG: FN1857 COG1788 # Protein_GI_number: 19705162 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Fusobacterium nucleatum # 1 217 1 217 217 382 91.0 1e-106 MRKKIVSMEEAISHIKDGMTIHIGGFLACGTPENIVTALIEKGVKDLTIVGNDTGFVDRG IGRLIVNNQVKKVIASHIGTNPETGRRMQAGEMEVELVPQGTLAERVRAAGYGLGGILTP TGLGTIVQEGKQVINVDGKDYLLEKPIKADVALIFGSKVDELGNVICEKTTKNFNPLMAT AADLVIVEALEIVPAGSLSPEHLDISRIFVDYIVESK >gi|292606568|gb|ADGG01000042.1| GENE 149 152441 - 153817 1861 458 aa, chain - ## HITS:1 COG:FN1858 KEGG:ns NR:ns ## COG: FN1858 COG2031 # Protein_GI_number: 19705163 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Fusobacterium nucleatum # 1 458 1 458 458 793 93.0 0 MESVKEKKGVFKRFTSMCVRVMERWLPDPFIFCALLTFLVFIGAVFFTKATPLDVVGFWA DGFWSLLAFSMQMALVLVTGHTLASSKLFKKMLSTFASGIKGPKQAIFIVSIVSGIACAL NWGFGLVIGALFAKEIAKKVKGVDYRLLIASAYTGFLVWHGGLSGSIPLQLASGGEALAK QTAGAVTEAIPTSQTMFSPMNIFIVVGLLIIVPLLNTAMFPSKDEVVEVDQRLLVEPEEV ELDPSKMTPAEKIENSRIVSILLSIMGFVYIAYYIKTKGFALNLNLVNFIFLFLGILLHG TPRRYLNALAEAVKGAGGILLQFPFYAGIMGIMVGADADGMSLAKLMSNFFVNISTEKTF PVFSFISAGVVNFFVPSGGGQWAVQAPIVMPAGQAIGVSAAKSAMAIAWGDAWTNMIQPF WALPALGIAGLGAKDIMGYCLIVTIVSGLFICTGFLLF >gi|292606568|gb|ADGG01000042.1| GENE 150 154064 - 155188 1404 374 aa, chain - ## HITS:1 COG:no KEGG:FN1859 NR:ns ## KEGG: FN1859 # Name: not_defined # Def: major outer membrane protein # Organism: F.nucleatum # Pathway: not_defined # 1 374 1 368 368 424 62.0 1e-117 MKKLALVLGSLLVVGSVASAKEVMPAPTPAPEKVIEYVEKPVIVYRDREVTPAWRPNGSV DVQYRWYGRVENKTPKKDTDGNWATAGNINAGRLQTETKVNFTEKQSLEVRTRNMHTLND KDDNNAKSAAKSDNVRVRHFYKLGNFDKVAATTRLEYDQKTGDGEKKLGASVLFDFSDYI YSNNFFKVDKLGLRPGYKYVWKGHGNGEEGAPTVHNEYHLAFESDFTLPLNFTLNLEYDL AYNRYREKLAVKDGLKKGEWTGELTAVLANYTPLYKAGAVEVGFNAEGGYDTYNMHQYKR IGGTGSVDGDSTATDRRDYELYLEPTLRVSYKPTDFVKLYAAAGADYRNRVTNESEVKRW RWQPTAWAGMKVTF >gi|292606568|gb|ADGG01000042.1| GENE 151 155367 - 156815 1849 482 aa, chain - ## HITS:1 COG:FN1860 KEGG:ns NR:ns ## COG: FN1860 COG1757 # Protein_GI_number: 19705165 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 3 480 46 523 525 793 92.0 0 MKAFLKLSPVIVLAALMMKGFDALLAAPLATIYACIIAMICSKQKFSTVIDHAIDNVKEI QVALFILMAAYAMAEAFMSTGVGASLILIALKVGITAKTVAVVGAIVTSILSIATGTSWG TFAACAPIFLWLNHIVGGNLLLTTAAIAGGACFGDNIGLISDTTIVSSGIQRVEVIRRIR HQGVWSALVLLSGIILFAVAGFTMGLPSTVGDPTEAINSIPADVWTALAEKREAAVKLLE QVKNGVPLYMAIPLVIVLVLAFMGTQTFICLFAGLFFAYVFGMMAGTVTSTMDYLDMMMG GFASAGSWVIVMMMWVAAFGGIMKSMNAFEPVSKLLSRISGSVRQLMFYNGLLCVFGNAT LADEMAQIVTIGPIIREMVEENVEGSEEDMYVLRLRNATFSDAMGVFGSQLIPWHVYIAF YMGIATVVYPLHEFVAIDIIKYNFIAMIAVASILILTLTGLDRLIPLFKLPSEPAVRLKK NI >gi|292606568|gb|ADGG01000042.1| GENE 152 157041 - 157832 1464 263 aa, chain - ## HITS:1 COG:FN1862 KEGG:ns NR:ns ## COG: FN1862 COG5012 # Protein_GI_number: 19705167 # Func_class: R General function prediction only # Function: Predicted cobalamin binding protein # Organism: Fusobacterium nucleatum # 1 263 1 263 263 501 97.0 1e-142 MSSGLYSTEKREFDTTLDLTKLRPYGDTMNDGKVQMSFTLPVPCNEKGIEAALELARKMG FVNPAVAFSEALDKEFSFYVVYGATSYNVDYTAIKVQALEIDTMDMHECEKYIEENFGRE VVMVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYKGVRAYNLGSQVPNEEFIKKAIELK ADALLVSQTVTQKDVHIENLTNLVELLEAEGLRDKIILIAGGARITNDLAKELGYDAGFG PGKYADDVATFILKEMVQRGMNK >gi|292606568|gb|ADGG01000042.1| GENE 153 157832 - 159388 2445 518 aa, chain - ## HITS:1 COG:no KEGG:FN1863 NR:ns ## KEGG: FN1863 # Name: not_defined # Def: L-beta-lysine 5,6-aminomutase alpha subunit (EC:5.4.3.3) # Organism: F.nucleatum # Pathway: Lysine degradation [PATH:fnu00310] # 1 518 1 518 518 1019 96.0 0 MGKLDLDWGLVKEARESAKKIAADAQVFIDAHSTVTVERTICRLLGIDGVDEFGVPLPNV VVDYIKDNGNITLGVAKYIGNAMIETKLQPQEIAEKIAKKELDITKMQWHDDFDIKLALK DITHATVDRIKANRQARENYLEQFGGDKKGPYLYVIVATGNIYEDVTQAVAAARQGADVV AVIRTTGQSLLDFVPYGATTEGFGGTMATQENFRIMRKALDDVGVELGRYIRLCNYCSGL CMPEIAAMGALERLDMMLNDALYGILFRDINMKRTLVDQFFSRIINGYAGVIINTGEDNY LTTADAVEEAHTVLASQFINEQFALVAGLPEEQMGLGHAFEMEPGTENGFLLELAQAQMA REIFPKAPLKYMPPTKFMTGNIFKGHIQDALFNIVTITTGQKVHLLGMLTEAIHTPFMSD RALSIENAKYIFNNLKDFGNDIEFKKGGIMNTRAQEVLAKAAELLKTIETMGIFKTIEKG VFGGVRRPIDGGKGLAGVFEKDSTYFNPFIPLMLGGDR >gi|292606568|gb|ADGG01000042.1| GENE 154 159390 - 160850 1664 486 aa, chain - ## HITS:1 COG:FN1864 KEGG:ns NR:ns ## COG: FN1864 COG1193 # Protein_GI_number: 19705169 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 486 1 486 487 674 81.0 0 MKFIDENSLNRLNFKDLLARVDVFSAYGKNKLNNLENFLVGEEEKLEEEFERVQKIYDFI SENKKEEMEIEIVLHRFKDIKKLVENADTGIILDTVDIFEIKAQLMAMVDLNSYLLKNKE VFSNFVLKDMNELFKILDPNDEKIATFYIYEAYSVILKEIRRQKKEVENRLFNETDYEIV KRLKDERLSILVDEEKEEFKIRRNLTKAIKSYAEDFLTNVEKISNLDFIIAKVKFAKEYN GIRPEVSKKKEIILEDAINLEVKELLEAKNKKYTPISINLNVGTTMITGANMGGKSVALK TIAENVLLFQMGFFVFAKYASIPLLDFIFFVSDDMQDISKGLSTFGAEIIKLKEINSYVK NGTGLIVFDEFARGTNPKEGQKFVKALAKYLNDKSSISIITTHFDSVVENNMKHYQVVGL KNLDFEKLKTKLQVNNSLETIQDNMDFTLEESMDTEVPKDALNIAKLIGLDDEISEMIYK EYEMEE >gi|292606568|gb|ADGG01000042.1| GENE 155 160856 - 161872 763 338 aa, chain - ## HITS:1 COG:no KEGG:FN1865 NR:ns ## KEGG: FN1865 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 19 338 1 320 320 529 90.0 1e-149 MLDTYKFIEKYKRISIIGMEKNVGKTTLLNKLIADIGTNKKLGLTSIGRDGEDIDVVTNT DKPRIYVRRGSIIATGRNCLAKCDITKEILYVTDFTTPMGSIVIVRALSDGYVDIAGPSY NKQVKIVVELMEKFGSEISIVDGALGRKSTAISDVSEATILSTGAALSLDMLKVVEETKK TVYFLKLNEAEKNIKEKVEKLRNEKAVLFYKNGEVAILEVDNSIDLSNILKEYLKKDLEY FYIRGAITPKIIEAFINNRGSYEKITLLAEDGTKFFLSSSLLDKAKLSGMEFQVLNKINL LFVTINPHSPLGVDFNKEEFKNRLQNEVSVPVINVLGD >gi|292606568|gb|ADGG01000042.1| GENE 156 161876 - 163153 1586 425 aa, chain - ## HITS:1 COG:FN1866 KEGG:ns NR:ns ## COG: FN1866 COG1509 # Protein_GI_number: 19705171 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Fusobacterium nucleatum # 1 425 1 425 425 843 96.0 0 MNTVNTRKKFFPNVTDEEWNDWTWQVKNRIEKIDDLKKYVELSAEEEEGVVRTLETLRMA ITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDRVL LLITDMCSMYCRHCTRRRFAGSSDDAMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSD KKLESIIKKLREIPHVEIIRIGSRTPVVLPQRITPELCDMLKKYHPIWLNTHFNHPQEVT PEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGL EHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNF EGVITTYTEPENYTHELCYDEEKFEKMYEISGVYMLDEGLKMSLEPSHLARHERNRKRAE AEGKK >gi|292606568|gb|ADGG01000042.1| GENE 157 163460 - 164497 1726 345 aa, chain - ## HITS:1 COG:no KEGG:FN1867 NR:ns ## KEGG: FN1867 # Name: not_defined # Def: Zn-dependent alcohol dehydrogenase and related dehydrogenase # Organism: F.nucleatum # Pathway: not_defined # 1 345 1 345 345 597 93.0 1e-169 MKKGCKYGTHRVIEPEGVLPQPAKKISNDMEIFSNEILIDVIALNIDSASFTQIEEEAGH DVEKIKAKIKEIVAEKGKMQNPVTGSGGMLIGTVEKIGDDLVGKTDLKVGDKIATLVSLS LTPLRIDEIIDIKPDIDRVEIKGKAVLFESGIYAVLPTDMSETLALAALDVAGAPAQVAK LVKPCQSVAILGSAGKSGMLCAYEAVKRVGPTGRVIGVVRNEKEKELLKRVSDKVRIVIA DATKPMDVLHAVLEANDGNEVDVAINCVNVANTEMSTILPVKEFGIAYFFSMATAFTKAA LGAEGVGKDITMIVGNGYTVDHAAITLEELRESAALREIFNELYL >gi|292606568|gb|ADGG01000042.1| GENE 158 164513 - 165328 1338 271 aa, chain - ## HITS:1 COG:FN1868 KEGG:ns NR:ns ## COG: FN1868 COG3246 # Protein_GI_number: 19705173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 271 2 272 272 530 95.0 1e-150 MEKLIITAAICGAEVTKENNPAIPYTVEEIVREAESAYKAGASIIHLHVREDDGTPTQDK ERFRKCIEAIREKCPDVIIQPSTGGAVGMSDLERLQPTELHPEMATLDCGSCNFGGDEVF VNTENTIKNFGKILIERGVKPEIEVFDKGMVDYAIRFQKQGFIQKPMHFDFVLGVQMAAS ARDLVFMVESIPEGSTWTVAGVGRHQFQMAALAIVMGGHVRVGFEDNVYIDKGVLAKSNG ELVERVVRLAKELGREIATPDEARQILSLKK >gi|292606568|gb|ADGG01000042.1| GENE 159 165352 - 165738 638 128 aa, chain - ## HITS:1 COG:no KEGG:FN1869 NR:ns ## KEGG: FN1869 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 128 1 128 128 250 98.0 8e-66 MKSLIRLRMSSHDAHYGGNLVDGARMLQLFGDVATELLIQLDGDEGLFKAYDSVEFMAPV FAGDYIEAEGEIVNVGNSSRKMKFEARKVIVPRPDLSDSAADVLAEPIVVCRATGTCVTP KDKQRGKK >gi|292606568|gb|ADGG01000042.1| GENE 160 166351 - 167073 553 240 aa, chain - ## HITS:1 COG:no KEGG:FN1870 NR:ns ## KEGG: FN1870 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 240 6 242 242 267 68.0 2e-70 MYYHIVKQEGLKYKNLDLKEAEEVVKKEKLNFNNSRIYSSPEALEHTIENFKQNENSLEE VVDRNEIRITDIIPCKNKDKYLHNCSYNFFMKIFNSSSQPRLKVFFNKTFIIWIMLLSTV LNRYLFYYLYKNYYKFSTYKLLFGFNVKPIWYVIFIYVGIPLSFILLIWYRDKYYKKNYL LMFIVLMVVINQIVDYVLGDTIDKLVVNFGGLLAICIGLIFTQLFYNLFRRLSYNKYKDF >gi|292606568|gb|ADGG01000042.1| GENE 161 167198 - 167479 371 93 aa, chain - ## HITS:1 COG:no KEGG:FN2058 NR:ns ## KEGG: FN2058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 93 1703 1794 1794 140 81.0 2e-32 VKHYFGRNALKAGVSVAYENELGRVANPKNKARVGYTTAGWYDLRGEKEDRRGNVKSDLN IGWDNQRIGVTANVGYDTKGNNVRGGVGLRVIF Prediction of potential genes in microbial genomes Time: Thu May 19 22:20:04 2011 Seq name: gi|292606567|gb|ADGG01000043.1| Fusobacterium sp. 1_1_41FAA cont1.43, whole genome shotgun sequence Length of sequence - 6769 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 2325 2583 ## FN1449 hypothetical protein 2 1 Op 2 . - CDS 2382 - 6413 5160 ## Sterm_2332 outer membrane autotransporter barrel domain protein 3 1 Op 3 . - CDS 6459 - 6767 175 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 Predicted protein(s) >gi|292606567|gb|ADGG01000043.1| GENE 1 3 - 2325 2583 774 aa, chain - ## HITS:1 COG:no KEGG:FN1449 NR:ns ## KEGG: FN1449 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 774 2180 2990 3165 447 42.0 1e-124 MEAHGDGAIGVYSNKALSTAKAVDVQGKKSAGYYAKENLTLLPNADITVKDSTGGNNDKT IGVFAEKAVNVQSKVNVGKSSIGIYKKQGTAVDNIQFAPSSEVTVKDKGVGVYAEKANIT LNPATKFNVGNNQAIGVYAVKGSTVNNASTNYSLGASSFGFVTENSTYNGGTETVTLNQN DSIFIYAKNSTVSDVGTISGTGNKLVGVYGVNSNISTTHDIDLSTGKGNIGIYGEGAGKT ITSTGNIKVGESILDPTDDSKSFYSIGIAGDKGVRINSNAGGNITLKGNNSIGIYGTGNG TVIDNHKDIIFAPTGKVDRMIGLFVNDGAKAVNYGNIYTASNYSGNSNVKGLVGVAVVKG TLENHGNITIDADGSFGMIVNNSVIKNYGTIRVNGKDSVGALYDTATKGATGKNDPSDYN TGGGSIIATGTGASNYKTSYNPDKTMPTSDNTEIKMENGKLVVKRNGKVVPDALVNTLGP QNNLWFSNVGLYIDTLGRTNPIQGTGFNPAGINDLIIGAEAADVTNSKNVRVGKNIMQRF INWSKANASSSLDIYSGSLTWSASYDPNTGEAIMAKIDYKDYSDKSKNEYNFLDGLEQRY DMNTLDSREKALFNKINSIQKNEGVLLSQAFDEMMGHQYANVQQRIQATGNILDKEFNYL RSEWQTASKDSNKIKTFGARGEYNTDTAGIKDYKSHAYGVAYVHEDETVRLGESTGWYAG IVHNTLDFKDIGNSKEEQLQAKLGIFKSVPFDENNSLNWTISGDIFAGHNKMNR >gi|292606567|gb|ADGG01000043.1| GENE 2 2382 - 6413 5160 1343 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2332 NR:ns ## KEGG: Sterm_2332 # Name: not_defined # Def: outer membrane autotransporter barrel domain protein # Organism: S.termitidis # Pathway: not_defined # 335 1317 228 1285 2435 329 32.0 5e-88 MGNNSLSNTEKNLRSIAKRYENVKYSVGLAVLFLMNGASAFSDTNTIQGPEKQNDVVSDA KAIKSAVKEKKEVKQASQKLKASWVNMQFGANDMYSNFFATPKTKVEKTSVVKNEKTVLV ASADNSATLPMFAKLLSDIEETTETRTEVLTTIANKEETPTMEEIKASKQELRSSVGNLQ DKIDTARRENQKEIDGLRLELIKLMEQGNQVVKSPWSSWQFGANYFYEDWGGSYKGRGDK KEKYPYEGKFQRADWWTASLSENSKNYKNLAKSTNPYSAATTQRGALGETNYGFIQRTKI QEKPVEMKLQAGVKPRTVSFTPLNIEAPSANLGASLNVPKVNIPVFSPVAPKIVIPTLAA VPTITTPGAGGGNDGEVGFWYANGQGEGWGHAVMSEIDILTGTIEGTFTNNSTLNFKVSD FKIQTGNNGQQAITSGSMPLTGAPYTTAFNPTTSVNGRTDQAIIKHVDTAVARYKAGTKI IATNDIAAPNYGKQILHYDEHYGGTRYTLDELVTNNIITDADRTAWKKYLNMSGEFPTHT AATRKFQMVENAGDWYLRGHKIMAVNLQAHGGSGQKNSIFLNKGNIIGLNEASAAGYIGE QAAFMFTQGSPTQEHRGFDNTGKIEMRAPLSVIFHHNDGGANSSNGLDIMINSGTAKLYG QKSAGYTSKGGATTSRAILKLDKPITLLGDQNIGAVIEKQMFFDKFVVKFDIGTENPRQK EPSASGVGGLENSGNITLTMSDVPAGTTAAELANLNKEAKFLTNNTTGYYTTFAGPYALK DFQVNLGKFARDSVGLRVNGSDLTIGDSAATHTATVKNFIKHEGNYINDKSTTNVTTGNI LVYMDPGANSKLSISHDTELSAKNSRAVTGIFVKEAAKLENKAKITMTNAPESKGIIVTK NTIEPDVTNYNDITVEGKNSIGVANYGKFEQKVKATGVKTSIKATGENAIAVYTNNSATP LKLNSVNIVAKNGAVGLYPEAAVGQKSTMELKDVNIEVGKDSLMLYNYTGSNATQVGDFD LKTDITASVEDGGVAFYNKGTIASIPAYLNMIKGGKTLKLTVKNGGRVFVLDDPSSVFNL SSLPSGAGTSTLNNAAGNGSVQITVTPGAKYKYYTANGGTLNIDTNVDLSNASDNYFKND IMSASVNVIKPMTNNGRAIADGTKYAIAQKNSDPTNINRVTVTVNAPITLTNIAGLAGVA VDAGKIINNDKITVTGDNGIGLLGAHKTEMTNNKDIIIGNNGIGILGLNKLTPTSQADGF KITQAANSKIKYAGNGKSAFGVVALNNDGTSTTYSSDVTLGANSQIDFSNTVGGIGVLLR GTKINFTDNGSIIKVGKKEEESL >gi|292606567|gb|ADGG01000043.1| GENE 3 6459 - 6767 175 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 3 100 250 347 347 72 35 1e-12 FDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSVGSNQYNIGLSRRRAEAVKAKLIE FGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRLVQR Prediction of potential genes in microbial genomes Time: Thu May 19 22:20:32 2011 Seq name: gi|292606566|gb|ADGG01000044.1| Fusobacterium sp. 1_1_41FAA cont1.44, whole genome shotgun sequence Length of sequence - 8614 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 9, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 404 629 ## gi|294783517|ref|ZP_06748841.1| conserved hypothetical protein 2 1 Op 2 . - CDS 418 - 816 568 ## FN2052 hypothetical protein - Prom 863 - 922 12.1 3 2 Tu 1 . - CDS 941 - 1444 564 ## FN2064 hypothetical protein - Prom 1488 - 1547 13.2 + Prom 1470 - 1529 15.8 4 3 Op 1 5/0.000 + CDS 1623 - 2090 762 ## COG1396 Predicted transcriptional regulators 5 3 Op 2 . + CDS 2050 - 2460 430 ## COG2856 Predicted Zn peptidase 6 4 Op 1 1/0.000 - CDS 2558 - 3142 842 ## COG0279 Phosphoheptose isomerase 7 4 Op 2 . - CDS 3156 - 4043 872 ## COG0583 Transcriptional regulator - Prom 4101 - 4160 10.5 8 5 Tu 1 . - CDS 4220 - 5929 2062 ## COG0018 Arginyl-tRNA synthetase - Prom 6161 - 6220 8.8 + Prom 5865 - 5924 5.6 9 6 Tu 1 . + CDS 5954 - 6109 62 ## FN0507 hypothetical protein + Term 6343 - 6386 2.1 - Term 6143 - 6190 1.1 10 7 Tu 1 . - CDS 6236 - 7081 1203 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 7124 - 7183 8.7 + Prom 7103 - 7162 14.1 11 8 Tu 1 . + CDS 7202 - 8206 1438 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 8234 - 8289 4.5 - Term 8281 - 8324 4.1 12 9 Tu 1 . - CDS 8400 - 8612 271 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606566|gb|ADGG01000044.1| GENE 1 2 - 404 629 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783517|ref|ZP_06748841.1| ## NR: gi|294783517|ref|ZP_06748841.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 134 1 134 134 120 100.0 3e-26 MKKFLKTILFLCALSSIAYAEDDAMSILDKKRTEIEKAEKAKAKLAKEAEEKARKEAEEQ ARLAEKAAKEQAQAVEVVEAPVETVVATEGLNPQDEKEAMEILDGMRKKIKKEDTETLKL QQEAKELGISTSEA >gi|292606566|gb|ADGG01000044.1| GENE 2 418 - 816 568 132 aa, chain - ## HITS:1 COG:no KEGG:FN2052 NR:ns ## KEGG: FN2052 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 132 1 119 119 117 85.0 1e-25 MKIKFILGAMLVVGAVSYSAEATDTVAQEVINEVRNIEAEYQALMQKEAERKEEFIQEKA NLEKEVKELKEKQLGREELYAKLKEDSKIRWHRDEYKKLLKRFDEYYNKLEQKIADKEQQ IVELTKLLEVLN >gi|292606566|gb|ADGG01000044.1| GENE 3 941 - 1444 564 167 aa, chain - ## HITS:1 COG:no KEGG:FN2064 NR:ns ## KEGG: FN2064 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 164 1 164 167 262 86.0 4e-69 MKNIHTNFLAEYILKLSGEYVSANRIHDILNISLSYTYTLVKNNKVRSRVKNGRTEYNME DFIRSLELSYNNNIVETPLTKEDFDANNFHNWEAKNDIEKYLERLLLDELGQFTSIKDLV EIFKVSKTIWYDALEEGKIMYFTISSRKIIITRSLLPFLREALSMQE >gi|292606566|gb|ADGG01000044.1| GENE 4 1623 - 2090 762 155 aa, chain + ## HITS:1 COG:FN2065 KEGG:ns NR:ns ## COG: FN2065 COG1396 # Protein_GI_number: 19705355 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 1 155 1 155 155 174 70.0 6e-44 MKLVSNFAERLKLALKLRNMKATKLSELTNVNKSTISQYLSGEYEAKKDRIELFAEVLNV NELWLRGYEFPMENEVDKEKDILIKEYQLNADEIREYENIAMTTSTLMFNGKPVSEEDKN ELEKVLKEFFIRALLKKRADENNDRKKKKRNSKID >gi|292606566|gb|ADGG01000044.1| GENE 5 2050 - 2460 430 136 aa, chain + ## HITS:1 COG:FN2066 KEGG:ns NR:ns ## COG: FN2066 COG2856 # Protein_GI_number: 19705356 # Func_class: E Amino acid transport and metabolism # Function: Predicted Zn peptidase # Organism: Fusobacterium nucleatum # 1 136 1 136 138 201 77.0 3e-52 MTERRKKEILKLIDNLYFEFGTKNPISICKGLGIEIVSANIEMKGLYTVVLNSKLIVVQS LLEGFAKLFVVGHELFHALEHDCDEIRFFREHTSFKTSIYEEEANFFSVQLLKDYIEYHQ DEVADLEIAEEIEKFI >gi|292606566|gb|ADGG01000044.1| GENE 6 2558 - 3142 842 194 aa, chain - ## HITS:1 COG:FN0502 KEGG:ns NR:ns ## COG: FN0502 COG0279 # Protein_GI_number: 19703837 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Fusobacterium nucleatum # 1 194 1 194 194 311 92.0 5e-85 MNLITSYKTELELLKKFIEEEEERKETEKVAKKLADIFTKGNKVLICGNGGSNCDAMHFI EEFTGRFRKERRALPAISISDPSHITCVANDYGFDYIFSKGVEAYGKEGDMFIGISTSGN STNVIKAVEQAKAQGLVTVALLGKDGGKLKGQCDYEFIVPGKTSDRVQEIHMMILHIIIE GVERIMFPENYEGE >gi|292606566|gb|ADGG01000044.1| GENE 7 3156 - 4043 872 295 aa, chain - ## HITS:1 COG:FN0503 KEGG:ns NR:ns ## COG: FN0503 COG0583 # Protein_GI_number: 19703838 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 295 8 302 302 417 85.0 1e-116 MDLHYLEIFYEVAKAKSFTKAAEKLFINQSAVSIQVKKFEDILKVKLFDRSSKKIKLTYT GETLYKMAEDIFEKVKRAEKEISRVIEFDRARIAIGASAIIAEPLLPSLMREFSSVHDEI EYNITMSNKEHLLKLLKEGELDVIIIDSQHITDPNLEIIPIEKGPYVLISSKHYDSIKDI EKDAIITRDVIQNNNKAIEYIEDKYGISFEKKINVLGNLEVIKGLVREGIGNVILPYYSV YKDIRKGTFKVITKIDEIKDGYELIITKDKKDLSQITKFIDLVKSHKIVMESSRN >gi|292606566|gb|ADGG01000044.1| GENE 8 4220 - 5929 2062 569 aa, chain - ## HITS:1 COG:FN0506 KEGG:ns NR:ns ## COG: FN0506 COG0018 # Protein_GI_number: 19703841 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 569 1 569 569 1008 91.0 0 MKIISKELTDIFQNLVNNLFPNKELKPVEITVATNENFGDYQCNFAMINSKIIGDNPRKI AEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKYLSDSIKKIGEAYDFSFLNRKGKVIIDF SSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVVADNHIGDWGTQFGKLIVGYRKWLNR EAYEKNAIEELERVYVKFSEEAEKDPSLEDLARAELKKVQDGEEENTKLWKEFITESLKE YNKLYERLDVHFDTYYGESFYNDMMADVVKELEEKKLAVDDDGAKVVFFDEKDNLFPCIV QKKDGAYLYSTSDIATVKFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHI WFGIIRFADGILSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSS VKYADLSQNKQSDILFEWDKMLSFEGNTAPYLLYTYARIQSILRKIDEQNIELNDSVEIK IENKIERSLATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNCPILNQDIDTL KSRALLIKKTGEVLKEGLSLLGIPVLNKM >gi|292606566|gb|ADGG01000044.1| GENE 9 5954 - 6109 62 51 aa, chain + ## HITS:1 COG:no KEGG:FN0507 NR:ns ## KEGG: FN0507 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 4 51 20 66 66 70 81.0 2e-11 MRIKKTDLSPHYGFSRQKEQVVVSYQKHTVSVIPQFDIRDASELLKTAPTP >gi|292606566|gb|ADGG01000044.1| GENE 10 6236 - 7081 1203 281 aa, chain - ## HITS:1 COG:FN0508 KEGG:ns NR:ns ## COG: FN0508 COG4667 # Protein_GI_number: 19703843 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Fusobacterium nucleatum # 1 281 1 281 281 440 80.0 1e-123 MKIGLVLEGGGMRGLFSAGVLDALLELKELSVNGIVGVSSGALFGVNYVSKQKERAVRYN KKYADDKRYMGLHSWITTGNAVNKDFAFYELPYKLDIFDNETFKKADTDFYVVMTNVESG KPEYVLIKDAFAQMEYLRATSALPFASKIIEINGKKYLDGGISDSIPIDFCESLGYDKII AVLTRPEGTYKEDKLGFLYKLVYRKYPNLVNSLLNMATDYEKVLAKIKDLENKGKIFVVR PPEVLKIGRLEKNRDKIQRVYDTGLKTGLKELDNIVKYLNK >gi|292606566|gb|ADGG01000044.1| GENE 11 7202 - 8206 1438 334 aa, chain + ## HITS:1 COG:FN0511 KEGG:ns NR:ns ## COG: FN0511 COG1052 # Protein_GI_number: 19703846 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Fusobacterium nucleatum # 1 334 1 334 335 545 88.0 1e-155 MEKTKIIFFDIKDYDKEFFKKYADNFNFDMTFLKVKLTEETVHLTKGYDVVCAFTNDVIN KANIDVMANYGIKLLAMRCAGFNNVSLKDIHNRFKVVRVPAYSPHAIAEYTVALILAVNR KIHKAYVRTREGNFSINGLMGFDLNGKTAGIIGTGKIGQILIKILRGFNMKVVAYDLFPN QKVAEELGFEYVTLDELYAQSDIISLNCPLTKETQYMINRKSMLKMKDGVILVNTGRGML IDSADLVEALKDKKIGAVALDVYEEEEDYFFEDKSTQVIEDDILGRLLSFYNVLLTSHQA YFTQEAVDAITLTTLNNIKDFVEGKELVNEVPQN >gi|292606566|gb|ADGG01000044.1| GENE 12 8400 - 8612 271 70 aa, chain - ## HITS:1 COG:Ta1471 KEGG:ns NR:ns ## COG: Ta1471 COG0675 # Protein_GI_number: 16082436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma acidophilum # 3 61 136 194 237 80 61.0 1e-15 NWYGRKIIKIPTFYPSSKTCSSCGNIKETLTLSERIYHCECCGLEIDRDYNASINILRKG LEILKEEKVS Prediction of potential genes in microbial genomes Time: Thu May 19 22:20:48 2011 Seq name: gi|292606565|gb|ADGG01000045.1| Fusobacterium sp. 1_1_41FAA cont1.45, whole genome shotgun sequence Length of sequence - 2213 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 2 - 1040 771 ## COG0675 Transposase and inactivated derivatives - Prom 1123 - 1182 13.9 - Term 1158 - 1211 3.2 2 1 Op 2 1/0.000 - CDS 1236 - 1895 418 ## COG0477 Permeases of the major facilitator superfamily 3 1 Op 3 . - CDS 2051 - 2212 249 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606565|gb|ADGG01000045.1| GENE 1 2 - 1040 771 346 aa, chain - ## HITS:1 COG:MA0258 KEGG:ns NR:ns ## COG: MA0258 COG0675 # Protein_GI_number: 20089156 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Methanosarcina acetivorans str.C2A # 6 346 3 336 370 219 38.0 6e-57 MKIIKKAYKFRIYPTLEQVIFFLKNFGCVRKVYNLMLDDRKKSYEEYKATGVKTEYPTPA KYKEEYPYLKEVDSLALANAQLNLEKAFKNFLKNKDFGFPKYKCKSNPVQSYTTNNQNTI YIKDSYIKLPKLKSLVKIKLHKKIKGIIKSATISKNSLDHYFVSILCEEEIEELPKTNKN IGIDLGIKEFATMSDCIKVENLKLSKEYEKKLKREQRKLSRRCKLAKDSNKKLSDSKNYQ KQKKKVAKIHNKIRNKRKDFVNKLSTKIINNHDIICIEDLNIKGMLKNHKLAKSISDVSW SEFVRQLEYKANWYGRKIIKIPTFYPSSKTCSSCGNIKETLTLSER >gi|292606565|gb|ADGG01000045.1| GENE 2 1236 - 1895 418 219 aa, chain - ## HITS:1 COG:FN1497 KEGG:ns NR:ns ## COG: FN1497 COG0477 # Protein_GI_number: 19704829 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Fusobacterium nucleatum # 5 219 158 374 374 164 59.0 9e-41 MLYIVNGVFIYFSFEDNKSTETDLVKIGKKSLLFFIKERKLWIYTLALTSSYSFYSIYLF IWQPVGKSLGITGSRLGSVYSLYLISFAISAFISKRNIKEFVYVLCTSLIPVSLIVIYCS HNLILYLVGIVSLGFNYKMAMLKIMGTVHNFISNEVRSSVISLVSSLSSVFLIGLQIIIG KILDTKNLFYLQILCIFIGIIYIICILLIQKWMHEENSR >gi|292606565|gb|ADGG01000045.1| GENE 3 2051 - 2212 249 53 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 48 329 376 405 84 70.0 6e-17 SQICNCCGYRNEEVKDLSVREWTCPVCGAVHNRDINAAKNILKEGLKILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 22:21:05 2011 Seq name: gi|292606564|gb|ADGG01000046.1| Fusobacterium sp. 1_1_41FAA cont1.46, whole genome shotgun sequence Length of sequence - 63159 bp Number of predicted genes - 71, with homology - 69 Number of transcription units - 25, operones - 11 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 253 - 735 481 ## COG0477 Permeases of the major facilitator superfamily - Prom 788 - 847 5.2 2 2 Tu 1 1/0.500 - CDS 876 - 2087 1862 ## COG0426 Uncharacterized flavoproteins - Prom 2137 - 2196 9.3 - Term 2196 - 2233 2.3 3 3 Tu 1 . - CDS 2262 - 2690 761 ## COG0716 Flavodoxins - Prom 2722 - 2781 9.6 4 4 Tu 1 . - CDS 2798 - 4204 1762 ## COG1306 Uncharacterized conserved protein - Prom 4235 - 4294 8.4 - Term 4254 - 4299 7.4 5 5 Tu 1 . - CDS 4314 - 4853 893 ## COG1592 Rubrerythrin - Prom 4913 - 4972 8.4 - Term 5057 - 5087 -0.6 6 6 Tu 1 . - CDS 5210 - 6685 2344 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 6764 - 6823 14.2 - Term 6761 - 6817 -0.9 7 7 Op 1 1/0.500 - CDS 7041 - 8795 2412 ## COG0006 Xaa-Pro aminopeptidase 8 7 Op 2 . - CDS 8829 - 10652 2608 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Prom 10913 - 10972 14.2 9 8 Op 1 . + CDS 11193 - 12185 913 ## COG0535 Predicted Fe-S oxidoreductases 10 8 Op 2 . + CDS 12160 - 13056 653 ## gi|294783541|ref|ZP_06748865.1| hypothetical protein HMPREF0400_01535 11 8 Op 3 . + CDS 13059 - 14171 835 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 14587 - 14634 2.5 12 9 Tu 1 . - CDS 14650 - 15144 658 ## gi|294783544|ref|ZP_06748868.1| hypothetical protein HMPREF0400_01538 - Prom 15165 - 15224 13.6 - Term 15231 - 15262 2.5 13 10 Op 1 . - CDS 15276 - 15608 415 ## gi|294783545|ref|ZP_06748869.1| conserved hypothetical protein 14 10 Op 2 . - CDS 15619 - 16068 346 ## FN0064 putative cytoplasmic protein 15 10 Op 3 . - CDS 16055 - 16342 401 ## gi|294783547|ref|ZP_06748871.1| conserved hypothetical protein 16 10 Op 4 . - CDS 16345 - 16881 733 ## gi|294783548|ref|ZP_06748872.1| conserved hypothetical protein - Prom 17043 - 17102 11.5 - Term 17146 - 17181 3.9 17 11 Op 1 . - CDS 17194 - 17907 914 ## gi|294783549|ref|ZP_06748873.1| conserved hypothetical protein 18 11 Op 2 . - CDS 17919 - 18632 892 ## Sterm_2818 hypothetical protein 19 11 Op 3 . - CDS 18635 - 19273 586 ## Cbei_0925 phage-like element pbsx protein XkdT 20 11 Op 4 . - CDS 19292 - 20350 1136 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 21 11 Op 5 . - CDS 20347 - 20799 455 ## Amet_2429 hypothetical protein 22 11 Op 6 . - CDS 20778 - 21302 759 ## gi|294783554|ref|ZP_06748878.1| conserved hypothetical protein 23 11 Op 7 . - CDS 21295 - 22275 989 ## Amet_2427 hypothetical protein 24 11 Op 8 . - CDS 22285 - 22818 499 ## gi|294783556|ref|ZP_06748880.1| PBSX prophage 25 11 Op 9 . - CDS 22831 - 24867 2668 ## COG5412 Phage-related protein - Prom 25059 - 25118 6.5 - Term 25083 - 25119 3.2 26 12 Op 1 . - CDS 25124 - 25513 618 ## gi|294783559|ref|ZP_06748883.1| conserved hypothetical protein 27 12 Op 2 . - CDS 25528 - 25959 698 ## Amet_2421 phage-like element pbsx protein XkdM 28 12 Op 3 . - CDS 25971 - 27035 1385 ## Cbei_0914 hypothetical protein 29 12 Op 4 . - CDS 27063 - 27503 490 ## Cbei_0913 hypothetical protein 30 12 Op 5 . - CDS 27503 - 27922 731 ## Ccel_2953 hypothetical protein 31 12 Op 6 . - CDS 27927 - 28262 249 ## gi|294783564|ref|ZP_06748888.1| conserved hypothetical protein 32 12 Op 7 . - CDS 28255 - 28548 468 ## gi|294783565|ref|ZP_06748889.1| phage protein, QlrG family 33 12 Op 8 . - CDS 28564 - 29673 1617 ## CLM_1659 phage major capsid protein, HK97 family 34 12 Op 9 3/0.000 - CDS 29678 - 30388 970 ## COG0740 Protease subunit of ATP-dependent Clp proteases 35 12 Op 10 2/0.000 - CDS 30381 - 31592 1200 ## COG4695 Phage-related protein 36 12 Op 11 4/0.000 - CDS 31593 - 33311 1828 ## COG4626 Phage terminase-like protein, large subunit 37 12 Op 12 . - CDS 33316 - 33798 562 ## COG3747 Phage terminase, small subunit - Prom 33830 - 33889 2.0 38 13 Tu 1 . - CDS 33904 - 34353 374 ## CLI_3273 hypothetical protein - Prom 34444 - 34503 8.5 - Term 34487 - 34529 3.3 39 14 Tu 1 . - CDS 34616 - 35050 452 ## gi|294783572|ref|ZP_06748896.1| hypothetical protein HMPREF0400_01566 - Prom 35098 - 35157 7.1 40 15 Op 1 . - CDS 35201 - 35752 615 ## gi|294783573|ref|ZP_06748897.1| dUTP diphosphatase superfamily 41 15 Op 2 . - CDS 35842 - 36033 254 ## gi|294783574|ref|ZP_06748898.1| hypothetical protein HMPREF0400_01568 42 15 Op 3 . - CDS 36062 - 36238 202 ## gi|294783575|ref|ZP_06748899.1| hypothetical protein HMPREF0400_01569 43 15 Op 4 . - CDS 36305 - 36472 275 ## gi|294783576|ref|ZP_06748900.1| hypothetical protein HMPREF0400_01570 44 15 Op 5 . - CDS 36465 - 36908 749 ## gi|294783577|ref|ZP_06748901.1| conserved hypothetical protein 45 15 Op 6 . - CDS 36958 - 37635 829 ## gi|294783578|ref|ZP_06748902.1| hypothetical protein HMPREF0400_01572 - Prom 37772 - 37831 10.4 - Term 37891 - 37940 2.5 46 16 Op 1 . - CDS 38001 - 39920 1838 ## COG3378 Predicted ATPase 47 16 Op 2 . - CDS 39953 - 41716 1878 ## Aflv_0653 DNA polymerase family B 48 16 Op 3 . - CDS 41791 - 42198 522 ## Aflv_0652 hypothetical protein - Prom 42309 - 42368 15.2 - Term 42403 - 42440 3.2 49 17 Op 1 . - CDS 42456 - 42638 272 ## gi|294783582|ref|ZP_06748906.1| hypothetical protein HMPREF0400_01576 50 17 Op 2 . - CDS 42631 - 42786 58 ## - Prom 43003 - 43062 9.6 51 18 Op 1 . - CDS 43096 - 43743 777 ## JDM1_0485 phage NTP-binding protein 52 18 Op 2 . - CDS 43767 - 44450 797 ## Mmc1_1237 hypothetical protein 53 18 Op 3 . - CDS 44472 - 45410 898 ## Aflv_0650 phage-related protein, endonuclease of lambda exonuclease family 54 18 Op 4 . - CDS 45400 - 46602 915 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 55 18 Op 5 . - CDS 46599 - 46925 252 ## Aflv_0648 RecB family endonuclease 56 18 Op 6 . - CDS 46915 - 47163 380 ## gi|294783588|ref|ZP_06748912.1| conserved hypothetical protein 57 18 Op 7 . - CDS 47163 - 47393 343 ## gi|294783589|ref|ZP_06748913.1| conserved hypothetical protein 58 18 Op 8 . - CDS 47338 - 47652 753 ## gi|294783590|ref|ZP_06748914.1| conserved hypothetical protein - Prom 47876 - 47935 13.0 + Prom 47827 - 47886 11.6 59 19 Op 1 . + CDS 48023 - 48829 1072 ## gi|294783591|ref|ZP_06748915.1| prophage Sa05, DNA-binding protein 60 19 Op 2 . + CDS 48842 - 49957 868 ## COG0582 Integrase + Term 49969 - 50003 0.3 - Term 49882 - 49921 -0.7 61 20 Tu 1 . - CDS 50104 - 50298 476 ## - Prom 50334 - 50393 5.6 - TRNA 50127 - 50213 72.5 # Leu CAA 0 0 - TRNA 50220 - 50296 75.9 # Arg ACG 0 0 - Term 50340 - 50383 6.2 62 21 Op 1 44/0.000 - CDS 50397 - 51371 823 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 63 21 Op 2 44/0.000 - CDS 51364 - 52371 629 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 64 21 Op 3 49/0.000 - CDS 52390 - 53259 1238 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 65 21 Op 4 38/0.000 - CDS 53269 - 54195 282 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Term 54209 - 54257 7.6 66 21 Op 5 3/0.000 - CDS 54266 - 55804 2362 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 55828 - 55887 10.0 67 21 Op 6 . - CDS 55905 - 57419 2117 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 57537 - 57596 18.4 - Term 57586 - 57634 6.6 68 22 Tu 1 . - CDS 57700 - 57957 429 ## PROTEIN SUPPORTED gi|237739403|ref|ZP_04569884.1| LSU ribosomal protein L28P - Prom 58032 - 58091 13.6 - Term 58056 - 58105 10.9 69 23 Tu 1 . - CDS 58123 - 61305 4347 ## COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain - Prom 61360 - 61419 10.8 + Prom 61390 - 61449 13.6 70 24 Tu 1 . + CDS 61472 - 62332 1030 ## COG0384 Predicted epimerase, PhzC/PhzF homolog + Term 62339 - 62390 -0.0 - Term 62329 - 62373 9.1 71 25 Tu 1 . - CDS 62383 - 63159 716 ## FN2055 hypothetical protein Predicted protein(s) >gi|292606564|gb|ADGG01000046.1| GENE 1 253 - 735 481 160 aa, chain - ## HITS:1 COG:FN1497 KEGG:ns NR:ns ## COG: FN1497 COG0477 # Protein_GI_number: 19704829 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Fusobacterium nucleatum # 19 160 2 144 374 177 67.0 6e-45 MKKNFIGLIWGETSYNISSILYSSVITAFLLQLGINNTQIGIIWSLVLFSQMIFDYPTGS FADKYGRLRIFTIGMIFMGIATIIIAKSYNVLMLYISGILLGLGESQVSGTLFPWFVNSI SIENNKEKQEYIFKINAQSQFLTNIIGVLTGFIISFFNID >gi|292606564|gb|ADGG01000046.1| GENE 2 876 - 2087 1862 403 aa, chain - ## HITS:1 COG:FN0512 KEGG:ns NR:ns ## COG: FN0512 COG0426 # Protein_GI_number: 19703847 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 403 1 403 403 777 90.0 0 MYCCTKINDDIIWIGVNDRKTQRFENYIPLDNGVTYNSYLILDEKICIIDGVEEGENGNF LSKIEAMIGTAPIDYIIVNHVEPDHSGSIKSLLKIYPELKVVGNAKTIMMLKLLGVDLAD ERVMVVKEKDVLDLGKHKLTFYLMPMVHWPESMATYDMTDKILFSNDAFGSFGALDGAVF DDEVNTDFFTDEMRRYYSNIVGKFGAPVNAVLKKLSPLEISCICPSHGLIWRKNIKALIE RYQKWANMEPTKEGVVIVYGSMYGHTAEMAEYLGRELGNRGIKDVIIFDSSKTDHSYIFS TIWKYKGLMLGSCAHNNDVYPKMEPLLHKLQNYGLKNRYLGIFGNMMWSGGGVKKIKEFA DSLPGLEQIGEPIEIKGHVTPIERDRLIELANLMADKLIADRE >gi|292606564|gb|ADGG01000046.1| GENE 3 2262 - 2690 761 142 aa, chain - ## HITS:1 COG:FN0513 KEGG:ns NR:ns ## COG: FN0513 COG0716 # Protein_GI_number: 19703848 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 142 1 142 142 223 87.0 1e-58 MSKISLVYYSATGNTEKMAKAIEEGIVEAGGAVTVYKSNAMDKDAILSSDVIVMGSSATG AEVIDENNLLPFMEEAGDKFKGKKVYIFGSYGWGGGEYADNWKAQLEGFGATIVDMPILA NEEPSDEELAQLKEVGKKLAAI >gi|292606564|gb|ADGG01000046.1| GENE 4 2798 - 4204 1762 468 aa, chain - ## HITS:1 COG:FN0456 KEGG:ns NR:ns ## COG: FN0456 COG1306 # Protein_GI_number: 19703791 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 89 468 1 380 380 664 91.0 0 MRITKKLLLLITIMFMSIFSSKEIYSKEKKSKPDYNYVVEKVSIYSDMNKKENIGYLIKG TRVNVFETKEVTKKIKNKQGKEIDATIIMKKITYKDVNKTKVAWIEDGYLVSTLNEAVDE RFKNLDFTEKEKKEYKDNKRVKVRGIYVSAHSVALKGRLDELIELAKKNNINAFVIDVKG DYGELTFPMSESINKYTKSANKNPIIKEIEPVIKKLKDNGIYTIARIVSFKDTIYAKENP DKIIVYKDGGKAFTNSDGLVWVSAYDKNLWEYNVTVAKEAAKAGFNEIQFDYVRFPASNG GKLDKVLNYRNTDNMTKAEAIQKYLNYAKKELSPYNVYISADIYGQVGTSSDDMSLGQFW EAVSSEVDYVSPMMYPSHYGKGVYGLDIPDANPYKTIYHSTKDSINRNNNISSPAIIRPW IQAFTATWVKGHIHYGPKEVKEQIKAMKDLGVDEYILWSATNRYENFF >gi|292606564|gb|ADGG01000046.1| GENE 5 4314 - 4853 893 179 aa, chain - ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 1 179 1 179 179 306 92.0 1e-83 MDLKGSKTEKNLMTAFAGESQARNKYNFYAKVAKEEGYEQIAELFDITANNEKEHAKLWF KALHGDTIPETIVNLADAAAGENYEWTDMYAKFAEEAREEGFMKLAKQFEMVGQIEKEHE ERYRKLLENIKNGTVFHSEEKVAWECMDCGHLHYGNDAPGKCPVCGADKAKFKRRAVNY >gi|292606564|gb|ADGG01000046.1| GENE 6 5210 - 6685 2344 491 aa, chain - ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 1 491 1 491 491 965 96.0 0 MENILKKSYRMFINGEWVNSSNGVMVKTYAPYNNELLSEFPDASESDVDLAVKSAKEAFK TWRKTTVKERAKILNKIADIIDENKELLATVETMDNGKPIRETTLVDIPLAASHFRYFAG CILADEGQATVLDEKFLSLILREPIGVVGQIIPWNFPFLMAAWKLAPALAAGDTVVLKPS STTTLSLLVLMELIQDVIPKGVVNLITGKGSTAGEFLKNHPDLDKLAFTGSTAVGRDIAL AAAEKLIPATLELGGKSANIILDDADIEKALEGAQLGILFNQGQVCCAGSRIFVQEGIYD EFVEKLVKKFENIKIGNPLDPTTVMGSQIDARQVKTILDYVEIAKQEGGVVLTGGVKYTE NGCDKGNFVRPTLITNVNNGCRVSQEEIFGPVAVVIKFKTDDEVIAQANDSEYGLGGAVF TKNINRALRLAREIQTGRVWVNTYNQIPEHAPFGGYKKSGIGRETHKVILEHYTQMKNIL IDLEEGTSGLY >gi|292606564|gb|ADGG01000046.1| GENE 7 7041 - 8795 2412 584 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 584 1 584 584 978 88.0 0 MEINKRIEAARKSMKRHKVDAYIVTSSDYHQSEYIGGYFQGREYLSGFTGSAGILVIFND EACLWTDGRYHIQAENQLKGSEIKLFKQGNTGVPTYKEYIVSKLAENSKIGIDAKILLSS DVNEILSKKKFKIVDFDLLAEVWEKRPALAAEKIFILEDKYTGKSYKEKVKEIRASLKEK NADYNIISSLDDIAWIYNFRGDDVQHNPVALSFTVISEKKASLYIDENKLNKGAKKYFKD NKVEVKGYFEFFEDIKKLKGNILVDFNKTSYAIYEAISKNNLINAMNPSTYLKAHKNETE IANTKDIHVQDGVAIVKFMYWLKNNYKKGNITEFSAEEKINSLREKIEGYIDLSFHTISA FGKNAAMMHYSAPEKNSTKIEDGVYLLDSGGTYLKGTTDITRTFFLGKVRKQEKIDNTLV LKGMLALSRAKFLFGATGTNLDILARQFLWNVGIDYKCGTGHGVGHILNVHEGPHGIRFQ YNPQRLEVGMIVTNEPGAYIEGSHGIRIENELLVKEACETEHGKFLEFETITYAPIDLDG IVKNLLTKEEKEQLNTYHKEVYEKLKPYLTKTEQAFLKEYTKEI >gi|292606564|gb|ADGG01000046.1| GENE 8 8829 - 10652 2608 607 aa, chain - ## HITS:1 COG:FN0452 KEGG:ns NR:ns ## COG: FN0452 COG0449 # Protein_GI_number: 19703787 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Fusobacterium nucleatum # 1 607 1 607 607 1066 92.0 0 MCGIIGYSGTNTNAVEVLLEGLEKVEYRGYDSAGIAFVTDKGIQIEKKEGKLDNLRNHMK QFEVLSCTGIGHTRWATHGVPTDRNAHPHYSENRDVALIHNGIIENYVEIKKELLEQGVK FSSDTDSEVVAQLFSKLYDGDLYSTLKKVLKRIRGTYAFAIIHKDFPDRIICCRSHSPLI VGLGEHQNFIASDVSAILKYTRDIIYLEDGDVVLVTKDNVTVYDKDEKEVKREVKKVEWN FEQASKGGYAHFMIKEIEEQPEIFEKTLGVYTDKEKNVNFDEQLEGINLHNIDRIYIVAC GTAYYAGLQGQYFMKKMLGIDVFTDIASEFRYNDPVITDKTLAIFVSQSGETIDTLMSMK YAKEKGAKTLAISNVLGSTITREADNVIYTLAGPEISVASTKAYSSQVLVLYLLSLYMGA KLGKLEEKDYVKYISDINLVKENISELIKEKEKIHEIAKRIKDVKNGFYLGRGIDEKVAR EGSLKMKEINYIHTEALAAGELKHGSIALIEQGVLVVAISTNLEIDEKVVSNIKEVKARG AYVVGVCKEGSLVPEVVDDVIQIKDSGELLSPVLAVVALQYLAYYTSLEKGFDVDKPRNL AKSVTVE >gi|292606564|gb|ADGG01000046.1| GENE 9 11193 - 12185 913 330 aa, chain + ## HITS:1 COG:PAE0579 KEGG:ns NR:ns ## COG: PAE0579 COG0535 # Protein_GI_number: 18312025 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Pyrobaculum aerophilum # 7 318 42 372 384 99 24.0 7e-21 MRIYLLITNRCNLKCSMCIRDNQHEKDMNFEDFKNIFEKRDTSNTEIVITGGEPTLNLEF VKFIEYSSTKFKKVLIATNGVFNQYIKNIKNIKNIIFQISLDGNENIHNQIRGGKIFNNI LETIKELEKYDLEYCIASVVGEDNYETIFELIPVLNKLKKMKYWKLSYKMPFGSAKKSDL LSSEKWNKFVDKILDIVEFRLSIKKIFPLELYDKYFDKLSSNNRCFNCGSGKEKVYIYPN FNVYPCTCLTDFCIGNIKDESLEDIIKGMSNKNFYNYNILENSICNQCKYKNFCNGGCMG MSYNILGKLGLGDIRCPIVKKYYEEKCILF >gi|292606564|gb|ADGG01000046.1| GENE 10 12160 - 13056 653 298 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783541|ref|ZP_06748865.1| ## NR: gi|294783541|ref|ZP_06748865.1| hypothetical protein HMPREF0400_01535 [Fusobacterium sp. 1_1_41FAA] # 1 298 1 298 298 485 100.0 1e-135 MKKNVYYFNINYLCDNKCIFCYSHNTNNLKTESIITLKEIIKTINKYKISEKDRLILNGG EPLLHKEINEILNYISNTNIETLIFTNGRNLTKLNPNFLTKNIRFIIPIHGDENTHNYIT KDTKSFQETLSSFKWLYENNLPCLVDLKIILNNETIKKLKFEKALKIWKEIPINNAIHIT KMMDTKVSKTNGCQSLNLDVVNKYTLKLFNEFKNNRKKLKFYSTCIKDILSSTKYEIEHE NLEITLLYKDYASEHYIDLNKKNTSCIFECDKKEYCLSEVDTYNVLEFYNNKFYNGME >gi|292606564|gb|ADGG01000046.1| GENE 11 13059 - 14171 835 370 aa, chain + ## HITS:1 COG:MA3317 KEGG:ns NR:ns ## COG: MA3317 COG0641 # Protein_GI_number: 20092131 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Methanosarcina acetivorans str.C2A # 13 352 9 350 380 101 25.0 2e-21 MKNIKSIALTIKPTNSCNFQCKHCFNGEHLEEKIFLPIETVFKTLELISKKYNDIKITFH GGEPTLAGIDFYKKIFSYEKILKKKYNVDFWHIFQTNGYLLSSKFIDLLISEDVLISISF DGPHNNDLRSNTDIILKKIQEIKEKNGNLRIFCVETAKSINFLLETYNWFKENKLNYKIL PIQPRGFAENEKDFILNPQIYVDALLKVYNFWLKDKENTMNMYTFQEFLKLKKESNFKEK WFDRKLSLNPDGNFYPFGRPYDINFNLGNPYDLDNIDECFSNKNYIKLKDILNKKINEKC TNCQVFSTCNGTCLCSSFVYGNDEDMLEYSCELARLTFKNVIKINEKVEKEISDKQYQSY SERVLKEFKK >gi|292606564|gb|ADGG01000046.1| GENE 12 14650 - 15144 658 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783544|ref|ZP_06748868.1| ## NR: gi|294783544|ref|ZP_06748868.1| hypothetical protein HMPREF0400_01538 [Fusobacterium sp. 1_1_41FAA] # 1 164 1 164 164 291 100.0 1e-77 MKRKGYKDIQKQIEANERYLENNPDAKVKANRSRVKSTCHRFIREFATVKELKNIKELIE TREETMEKMTKEKWEKVAEKIKGKTYVNNDCSFGWQGEINAECETENPILFGDIEKWSFH EDTRFVQCYEEDGEAGYLLLEIEINYDEDDGGMIVTIVDAIHKG >gi|292606564|gb|ADGG01000046.1| GENE 13 15276 - 15608 415 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783545|ref|ZP_06748869.1| ## NR: gi|294783545|ref|ZP_06748869.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 110 1 110 110 186 100.0 5e-46 MIALTQEHLGFIGSIVGLIGVIVGVMSAIDRKFEKNNTRLEIMIDKKLDKIVYEEHKKAF ESWTNEKDKILENKINKMENDFKSDLQEIKATLKEINSHILGCGKRTDDK >gi|292606564|gb|ADGG01000046.1| GENE 14 15619 - 16068 346 149 aa, chain - ## HITS:1 COG:no KEGG:FN0064 NR:ns ## KEGG: FN0064 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 4 111 2 109 117 79 45.0 4e-14 MEKSKLNLRLLSDGKAILTDDYIYDINGYQIKVFKGFITDGASIPKVLQCIYNPYGKWIK GAVIHDYLYSKYNTTGINRKLADKIFKLIMLETGVNKSTANKFYKAVKLFGEMSWQDKIY NEGYKDQAIIDRTKEAKEYYMQWNKILKL >gi|292606564|gb|ADGG01000046.1| GENE 15 16055 - 16342 401 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783547|ref|ZP_06748871.1| ## NR: gi|294783547|ref|ZP_06748871.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 95 1 95 95 144 100.0 2e-33 MEKELLWNVLGYVVSLVVYLVLKWRYEGREAVNREAIEQEISIQGKGLGDLKKKAVQEFI SKLPKHLRIFINENTIDAVVAELQPLFKKLKDGKE >gi|292606564|gb|ADGG01000046.1| GENE 16 16345 - 16881 733 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783548|ref|ZP_06748872.1| ## NR: gi|294783548|ref|ZP_06748872.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 178 1 178 178 342 100.0 8e-93 MKKVALIIGHNKRSKGAFSMIVGDEFGYWKNIAYKIKSAIPEMIDIYEREPNQNYVREMN KLLVELNKHNYEYCLELHFNSALDSKANGCECLIYKGNKKAKELSTNFMARLQNIFNSKV RGVIEIADSKTRGGYGICNSKDTYVLLEPFFGSNVDESLKFSVVKDVVELFVNFIKEV >gi|292606564|gb|ADGG01000046.1| GENE 17 17194 - 17907 914 237 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783549|ref|ZP_06748873.1| ## NR: gi|294783549|ref|ZP_06748873.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 237 1 237 237 427 100.0 1e-118 MKTINFYKKDKLIFSVYADELDDVLAKPQDYFSGYSSDMIITDVMYEYPIFKDDRLREMT KEEKVRNNIPVQLVDGEFIKDKKLIVVPKPAGNQKYMYWDKDKWLLDNQKEFDDYCNLID ELKAKSLAYGFDYKVKDKDHRQKCRDTDIAKMVSVIVALQIAEKLGKIKKITWYFEDNFG MEAGLQELGTLMLYGTTFVQSVYDTENYFKTKVNPKEVTSDEFESKRKEIHLKLATS >gi|292606564|gb|ADGG01000046.1| GENE 18 17919 - 18632 892 237 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2818 NR:ns ## KEGG: Sterm_2818 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 49 166 161 277 349 65 34.0 1e-09 MSKYTEHLGLVQPAGNEYYDIEQFNHNAELIDKETKKLNEGLAKVQEGATREKAGIVQFG TGEGKALEGMMLARLAGCVAYGGDIQDEGVKDINYLYYDRNTRKMYKCINQNSDVSANVA NFKPLDNNSLDENMNKLAVLVQNNISDKGFFKVSIYKLSNILIITVWSTGKKDIDYLEID SCSILNYKVKEAHSAITGNKGTAGQLYITNNKIQVNGTNSSQPLTHSFMGQIITQII >gi|292606564|gb|ADGG01000046.1| GENE 19 18635 - 19273 586 212 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0925 NR:ns ## KEGG: Cbei_0925 # Name: not_defined # Def: phage-like element pbsx protein XkdT # Organism: C.beijerinckii # Pathway: not_defined # 1 170 27 197 201 117 37.0 3e-25 MQHMPKYYRDIVEIEELQNAIDLQLDELDIMSNEVLKQFFIYTATWSLPIWERIFGLTVG NTTSNLKERRENIISKLRSYGTTTKEIIARVAKAFTNGEIEVIEDNPNYSFTIKFTSIVG IPDNLENFKKVVGTIKPAHLNFNVEFRYNTHNQIGYLYQNSLKTKKHTELFDTRLYNDTD VVGKYHRFDEIGNLKHSELKTKTYNAVYDERR >gi|292606564|gb|ADGG01000046.1| GENE 20 19292 - 20350 1136 352 aa, chain - ## HITS:1 COG:BS_yqbT KEGG:ns NR:ns ## COG: BS_yqbT COG3299 # Protein_GI_number: 16079651 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Bacillus subtilis # 1 347 1 343 348 197 35.0 3e-50 MIIKKEWKKILSDMLSNVHDDYDKSEGGLFYDNLAPVSIEMEEIRDVLDYIFLNSFAETA EDEYLDNICKEVGVFRKQPTKSKGKVIIKGTPNTIIPVGTKVASDTYIYLTTEEKIIGVS GEVEVKIESENTGKIYNLPKNTIVNFPITIPNLNEVNNPSETVDGYDGESDNELRERYYF KVREPVTSGNIYHYKKWTMEVEGVGGVKVFPLWNGNGTVKVVVVNSAIEEADEPLLQRVR DYIEQVRPIGATVTVKSATPKEITITGKARISKNVDFDKVKADFERDIKEYFKKVGFKQN YVSYAQLGNILLNVEGVNDYDNLKINTGAINIALAEEEIPKLKVITLDKEVV >gi|292606564|gb|ADGG01000046.1| GENE 21 20347 - 20799 455 150 aa, chain - ## HITS:1 COG:no KEGG:Amet_2429 NR:ns ## KEGG: Amet_2429 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 25 145 22 139 146 66 32.0 3e-10 MAILPKIEFKDYSKDVINESKNTNGKTFLIDFQKKRMLRSNGKLIKTDDERAVRMWIEKV LLTEKFKWNIYKENGSNQYGMMYKANLLGQRFPTPVLYSEFERELIETMKKNKQILEINI LEIKLEKHTLKTKFDVTLKDFTRFEWEGYL >gi|292606564|gb|ADGG01000046.1| GENE 22 20778 - 21302 759 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783554|ref|ZP_06748878.1| ## NR: gi|294783554|ref|ZP_06748878.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 174 1 174 174 337 100.0 2e-91 MSDNKKSWDIALAEKFKERDNPSPIGAVLGKILKPLPDISIELLSGYGVIDADKIYLSNA ITNRLEIECTMKNFESQGNKSSNCTINGLDTTGGGEDSAGHTNLSISGHTGSYKSSSSKT DNKDKGKFILQTVFNLKEGMYVLVIPNVEEDKFFVVDVFNYAPEVSLEWQYYQK >gi|292606564|gb|ADGG01000046.1| GENE 23 21295 - 22275 989 326 aa, chain - ## HITS:1 COG:no KEGG:Amet_2427 NR:ns ## KEGG: Amet_2427 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 9 322 14 327 328 193 37.0 6e-48 MYKVIIKDKDVSDIIGNLTWRDTVDTLGVEVDFELPINRYDKKFEFLYDITLGDPIQILN AKGEVLVQAIIVSETPNGKITSFTAYDMAWYLNKSTVIKQFKKMIGNDCVKSLCKEIGIN VEVTGLDTKIDKIYKDKAVSEVIKDIIEQCSQFNSKKFFIEFNNGTLKVMPYQKIKVFGT FEIQKDKFININENIGGVSLSKSIVDMKNSVLVITENKGAVRTIGEEQDSKSIEKYGKLQ EVVTLDEKEFSKANLVAKNELKKLNKITEDFSIDVLGDDNVKSGRVIDIDLPLFNLKGEY LIKESNHTISNHIHKISLKLEVYSDE >gi|292606564|gb|ADGG01000046.1| GENE 24 22285 - 22818 499 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783556|ref|ZP_06748880.1| ## NR: gi|294783556|ref|ZP_06748880.1| PBSX prophage [Fusobacterium sp. 1_1_41FAA] # 1 158 3 160 179 278 100.0 9e-74 MKIIFIGENEGQMEIINIPVVQAIEPITCDTMDEDFVTIDGNTLNLIGGKGLRRFSFSSF FPSKLYSFVSFLNFRPPKYYIKFFEKYRDLKLPVRVIIIDKFSVTLNMLCRYNFSYTLRD RAGDVPYTLDITEYIIPPNKTTAPVESNKPNNTNTNIDKKTKIKNKVKANANKKPKK >gi|292606564|gb|ADGG01000046.1| GENE 25 22831 - 24867 2668 678 aa, chain - ## HITS:1 COG:lin0168 KEGG:ns NR:ns ## COG: lin0168 COG5412 # Protein_GI_number: 16799245 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Listeria innocua # 423 630 365 548 622 63 24.0 2e-09 MSKTVAVILNLKDKFTSPLHKVNEKLGTTEKKLKQANRSVKKFTNAIKAGMKSVAKWTAI GFGALTAAVGVFLKQSIEAAKDKLKADKLLETNLMKQANASKEHIKMLKDEASALQDVGV VGDDVAVAGASRLAVFKMNADQIKKTMPLLDDMIAFDKGLNGTQEDAIAIGELYGKAING KVNALKKYGVVLTANEEKLFKVMSTEQRIEFINKKLEKSIGGTNKALRATDEGKIVAMKG AWGDMQAELGKKLMPKLGNLAEWFHSKIPAIQDFILSLADKVEAMVINAEPYIVQIKELL GKMFEKIKPALDEVWDILQKAGSFAIDIAKDIKDNWDWIAPIITGVAVAFGVYKTAIMLA SAKTLLFNGVMVVTNFLLNANPIGFVVLAIGALIGGIVALYKNWDKFKAKVQELWAKLDN NPLGKLLKHIIKFGNPIGAMINLFLFFKRVITENWDTIKGFGEYIWNGLVGAFNYVKDII LGVCSIVGGIFTAVWDGVISALDKLKAGFNKVTDFLTGVFQSAWDSLMKALDMVLHPIET AKKAFGGLIDKLKFWNNTKIEDKTVNINEVKTTDSIGGSNKSGTTSTTIAKNPRHALGTA YFKGGVTGINEGGRNETAILPAGTQILSHEQGKAINNKMTKGITININVDGNFIGERDQM EKYAEYTANKILSTLGNM >gi|292606564|gb|ADGG01000046.1| GENE 26 25124 - 25513 618 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783559|ref|ZP_06748883.1| ## NR: gi|294783559|ref|ZP_06748883.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 129 1 129 129 237 100.0 2e-61 MAKNITLEMLLARKEQSNNDKMRIAYFNSEVLGGTIEVVKLKARDVLKVMDNADDKSTDG AYRANCKLIYKHCPLLQKKELQEAYEVAEPYDVVTPVFDENLGEINKLATFILGLYGLAE NEDIDDIKN >gi|292606564|gb|ADGG01000046.1| GENE 27 25528 - 25959 698 143 aa, chain - ## HITS:1 COG:no KEGG:Amet_2421 NR:ns ## KEGG: Amet_2421 # Name: not_defined # Def: phage-like element pbsx protein XkdM # Organism: A.metalliredigens # Pathway: not_defined # 3 143 4 144 147 143 51.0 2e-33 MFNKMDKNKIIRGSFGAIWFNGEEVGSVKSFEAKVALDYEDVDIMGDLGKHKRYMGYAGE GTMTLHKIDSAIAKLIGDAIKSGNMPDFTIVAKLEDPSADGAERVEITGVTINELMTIKF ENKSLREEEVPFAFSGYRFIDLI >gi|292606564|gb|ADGG01000046.1| GENE 28 25971 - 27035 1385 354 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0914 NR:ns ## KEGG: Cbei_0914 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 3 353 5 362 363 268 44.0 3e-70 MGLPSIEIIFKQLAVTAVKRSQLGIVGLIVNEVGKNWTMKEYKSIIDVKDDDYTAEVLPL VKDTFEYTPNKVFVFNKGAGTLADTLKLVEQERINWIGLAYDGASGDTATLVSWTKSVRK AGKTYKAVVFKATKPDNKGIVNLMNDKVTFVDARGEVDGWQYVPTILGMLAGLPMTRSAT SFLCGNLKEVSIFNKINETIDKGGFCLYKDEGDIRVARGCTSLEEITQDETEDMKDIIIV ESMDLMRDDIYSTFKKWIGKYKNKYDNQVLFFTAINAYFKELEREDILDKEYDNYSQVDV EAQRLAWLGVGKKEVEDYDDEKIKKLTFKKKVFMKANIKILNAVEDFKFTINMF >gi|292606564|gb|ADGG01000046.1| GENE 29 27063 - 27503 490 146 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0913 NR:ns ## KEGG: Cbei_0913 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 144 1 160 163 70 31.0 2e-11 MIKLSDILKAVNSTLNNACPEIEIDSKDLSEKFNRPSFRTELDGLKTSAFMTTYKERHFT IRIYFFTSVIGKGKLERLKITEKIEDAFLGSLKVTDDFIIPVDDIDFDETDDGVLIASFD SLTMEKIENDVDKYMMEELEYRIDKK >gi|292606564|gb|ADGG01000046.1| GENE 30 27503 - 27922 731 139 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2953 NR:ns ## KEGG: Ccel_2953 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 2 137 3 138 139 93 45.0 3e-18 MDGFTIDELEQLEKEVLKLAKKYPNETKKFLQKQGNKLKGVVKKIAKAKVKTKTGNYMRG FKRGKYYKYNEEDDCIRVYNYMPHAHLIEKGHIIKDKTGKEHGFKKGYFVLEQGHRDYYD KFVKSTDEFVDEVIKNGGF >gi|292606564|gb|ADGG01000046.1| GENE 31 27927 - 28262 249 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783564|ref|ZP_06748888.1| ## NR: gi|294783564|ref|ZP_06748888.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 111 1 111 111 205 100.0 6e-52 MLNITKKLRHLVEVYQMKVSVNDLGENDTVPELLKRAYCEILPLNSTVKNGEANTENNQH QFKFTFRRKSIQGIKKDWFFLFEGLKYEVIYFNRDFKDNQFIEVFCVRTEE >gi|292606564|gb|ADGG01000046.1| GENE 32 28255 - 28548 468 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783565|ref|ZP_06748889.1| ## NR: gi|294783565|ref|ZP_06748889.1| phage protein, QlrG family [Fusobacterium sp. 1_1_41FAA] # 1 97 1 97 97 150 100.0 2e-35 MDKFLTLDEAKNYLRIDYDDDDLWLQSLLVATVDYLRDAIDDFDIKVEKDKFKSRAKIIA LVLLQDWYDNREHAESKDLTYTIRSMITQLQVGGDYA >gi|292606564|gb|ADGG01000046.1| GENE 33 28564 - 29673 1617 369 aa, chain - ## HITS:1 COG:no KEGG:CLM_1659 NR:ns ## KEGG: CLM_1659 # Name: not_defined # Def: phage major capsid protein, HK97 family # Organism: C.botulinum_A2 # Pathway: not_defined # 1 364 1 380 391 199 38.0 2e-49 MKKSIEMKKELESIRNEIKALKDEGKIEDAHAKLTAFKELENKIKEVETEEALEAMNEKT QVNVKNEMNANRLFNRVVLGKPITDEERQFLNAVGTPGQVEATDGKGGYLVPVEQFNQIK ELRRNKVELKTLCNVQPVKSLSGKQPIEKNSNGELIAFDELNAITMSDIDFGQIEYKVKD YGDIIPVSNTLLADENANLTAYIGKRFVKKAINTENKKIIAELKTLTPKAVADYTGISKA LNIDLDPAISENAVIITNQTGFDFLDGLTDKQNRPLLEINLQNTTQKIFKGRKIVVVSDE LLPMNTTKAPVFVGDMTEFITFFDREGLELAVSTEAGFTKNATFMRAIERFDIAKVDDKA MVYLELATK >gi|292606564|gb|ADGG01000046.1| GENE 34 29678 - 30388 970 236 aa, chain - ## HITS:1 COG:ECs2960_1 KEGG:ns NR:ns ## COG: ECs2960_1 COG0740 # Protein_GI_number: 15832214 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 50 181 104 233 244 108 39.0 1e-23 MDKKWLEIKNKADVTEIYINGDIVSDSNNDGFYEFFDLNNPNVYPLDVANALKEAGEVHV HINSYGGDVFAGLAISNMLKNHKAKTVAYVDGLSASSASIIAFGCNEIVIPSNAYLMIHR VSCGLFGNADDFLKQVEVMEKIEEGIVDTYMEKAVEGVTKEQIYDLMKAETWFTGKDCLN YFDVKVDNNPIYLNKVDTKQKYNHIPESLSNSVKDMELARLEKIKKEIEIELSIGG >gi|292606564|gb|ADGG01000046.1| GENE 35 30381 - 31592 1200 403 aa, chain - ## HITS:1 COG:CAC1894 KEGG:ns NR:ns ## COG: CAC1894 COG4695 # Protein_GI_number: 15895168 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Clostridium acetobutylicum # 1 403 13 408 419 121 26.0 2e-27 MKNIFKRFFNKSENTTPINTMNFKEFFGINVNDDLSEITYYTCLKVLSESVGKLSIHLKD NKNNRIVDHEALQKLKFAPNPFMTSTPMMTLLETWRNHHGNAYAYLSYDNGGKLVGMYPM HPQNVRILIDNAKLFSGEEKLYYEYTHNGKQYVFDSKNVLHLKGGLSKDGIVGVSVRETL ATTLSGVKASQKYLNTLYERGLTAKAVLKYTGDLSKENQKKMLDAMQEFINANSNPSGIF PLPLGMDLVPLDLKLSDTQFFELKKYTALQIAGAFGVKPNHLNDYDKSSYSNSEMQNLSF YVDTLLYILSLYEEEFNLKLLTEKERLSGLHFEFNVSSILKGDLKTQAECITKFIQSGVY TINEARNLVGLPPVNGGDVIVMNGSYVPLEKLGIAYDKGGGNG >gi|292606564|gb|ADGG01000046.1| GENE 36 31593 - 33311 1828 572 aa, chain - ## HITS:1 COG:ECs1598 KEGG:ns NR:ns ## COG: ECs1598 COG4626 # Protein_GI_number: 15830852 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 # 9 544 7 525 553 218 28.0 4e-56 MAKDRTTAYAKLVVSGKKITGRKEYLACKRHLDDLKKKKFEYKFDVEEAEFAIDFANNLT MKDGKQLKTRGFQEFIIGSLHGWKKKKTGDRRFREAYLQVGRRNGKSFLSGIESTLFSSM IGVKERIFCAATKQDQANIVWDEVRNFIESDRELTELYVVKEHDRTIKSSLTGSVIKALS KDTKGMDGFGNVLAICDELHAHPNNQIYKLLFDGQADVDNALTLAITTAGFNLNSFCYEH YKFCEKILEGVIEKDTLFIFICEMDADDDIWDWKNWLKSNPYFLYEEDGITPNKKKIDLF KQKAIDAKEKGGAELVNFLTKQLNRWVTTGSGQYINLEKLKECESDLTLEDMKGKDCYLG FDLSKGGDLTSIALVFPLENEKIYVYSHSFMPELRLEEHKKTDDVPYQIWVKKGLMTLTT GAFGMKTDYKYIISHLKEIIDKYELNVLECGYDAHNAGSFLADLDFLGCDLTEVKQSAKS LNDATVDFALSVEALQVMYDKKNELLRWSLANATTTSNSFGEKKIDKQSQKNRIDPVDAV LDAWKIMLLNKEEIINNDELVDNWLKVFTKGG >gi|292606564|gb|ADGG01000046.1| GENE 37 33316 - 33798 562 160 aa, chain - ## HITS:1 COG:CAC1896 KEGG:ns NR:ns ## COG: CAC1896 COG3747 # Protein_GI_number: 15895170 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Clostridium acetobutylicum # 16 151 22 151 151 60 28.0 2e-09 MSRRKIIDISTGKIGKEKIQARKEAEKKLKANRDDLIAPEWLTENAKAEFDRVVSECDKI NILDNLDLGVLAIYCNAYDGYIETTKKLEVEGLVKKKMTRTGELEFINPLVNVQEKYVKY IMQSSSKLGLATTDRLKLVVPVKEEKPENKFITMLKERQA >gi|292606564|gb|ADGG01000046.1| GENE 38 33904 - 34353 374 149 aa, chain - ## HITS:1 COG:no KEGG:CLI_3273 NR:ns ## KEGG: CLI_3273 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 20 133 34 147 157 73 37.0 2e-12 MLMTTCARCGKKKPANIKCECNKNRHKIYDREYRDKDSAEFYNSKQWKSLRNICKAKAKG LDLYELMVNHNYVVGTLSHHIEELKDNKARALDINNLIWISEKTHNYIHAQYDKSKKDKL DMQKRLFDILNKYYNDESIVFSLIAGGID >gi|292606564|gb|ADGG01000046.1| GENE 39 34616 - 35050 452 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783572|ref|ZP_06748896.1| ## NR: gi|294783572|ref|ZP_06748896.1| hypothetical protein HMPREF0400_01566 [Fusobacterium sp. 1_1_41FAA] # 1 144 1 144 144 219 100.0 3e-56 MEQKTVFKKMEDILYAYPKYQNRMREEQKHLTNIELEKSYRLKELNNQNSFEYKSELEKL EETRDRIYHNIQRYEEILFRINEALDMIKGHKYYDFIPMKYFSKMSYESIAEKFDINVSS VYKAKNKILGSLEIHFLAQKLICY >gi|292606564|gb|ADGG01000046.1| GENE 40 35201 - 35752 615 183 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783573|ref|ZP_06748897.1| ## NR: gi|294783573|ref|ZP_06748897.1| dUTP diphosphatase superfamily [Fusobacterium sp. 1_1_41FAA] # 1 183 31 213 213 333 100.0 3e-90 MNRCETNNKCETNNKPENFTDLLNLQKELDKKIINYRPRKLKDIKKSLIAECIEFDEETI DSHKTWKTNKRHKEKELEELTDIWFFVAQLINYACDIGDVTITEVRNLDVFFKTEDYIYF GDTDVLTIINDVRTPRFTYEFLRELVRDLKCLSLNYGYKHNDILDCYWTKWNKNINRINS EWN >gi|292606564|gb|ADGG01000046.1| GENE 41 35842 - 36033 254 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783574|ref|ZP_06748898.1| ## NR: gi|294783574|ref|ZP_06748898.1| hypothetical protein HMPREF0400_01568 [Fusobacterium sp. 1_1_41FAA] # 1 63 1 63 63 80 100.0 4e-14 MIKYIIEVQTKDRSFKAYLFRKDYLNENEVEEEKIRFCKELREDYKKANSNIEIIESRIR VDE >gi|292606564|gb|ADGG01000046.1| GENE 42 36062 - 36238 202 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783575|ref|ZP_06748899.1| ## NR: gi|294783575|ref|ZP_06748899.1| hypothetical protein HMPREF0400_01569 [Fusobacterium sp. 1_1_41FAA] # 1 58 1 58 58 88 100.0 1e-16 MKVEFDFKRAEKLILEHKVDEMSTSEYTHLKTYSNKFEDYHFVKKRPAIEKYSWIDNR >gi|292606564|gb|ADGG01000046.1| GENE 43 36305 - 36472 275 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783576|ref|ZP_06748900.1| ## NR: gi|294783576|ref|ZP_06748900.1| hypothetical protein HMPREF0400_01570 [Fusobacterium sp. 1_1_41FAA] # 1 55 1 55 55 83 100.0 5e-15 MNKLILSLINQFMVEHQDEIVEVITNPDGDLSKQWIEQGNSVKEYLGQENNNLKN >gi|292606564|gb|ADGG01000046.1| GENE 44 36465 - 36908 749 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783577|ref|ZP_06748901.1| ## NR: gi|294783577|ref|ZP_06748901.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 147 1 147 147 275 100.0 6e-73 MLELDVKVIDSKWSVAKFTKIENIKDSNYVEWSDGETRFYTNIICINKQDPHKPFVVYNK DINILTSLVAVINREPMVWRARYGKRYYYIDSFGDMDTAVDVYSTSDDTRYNLGNYFETE IEAKRVLDSKEWREFWERVRGGEIGNE >gi|292606564|gb|ADGG01000046.1| GENE 45 36958 - 37635 829 225 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783578|ref|ZP_06748902.1| ## NR: gi|294783578|ref|ZP_06748902.1| hypothetical protein HMPREF0400_01572 [Fusobacterium sp. 1_1_41FAA] # 1 225 1 225 225 459 100.0 1e-128 MNYTVGNFIANGKGLENIELFSELYDEYCNYCDNHWYNKCSKKRFAMELNNYGVDVYAGT GNIRKIRLNRVRPDNVNQPNHYVIGDTGLECKDFISAWVGKGYYSVFCFCNVMKYLVRAE KKNKLEDYKKALKYLDMIIEAGADTIVLDIADIGIEDGTKEYTGVEWNEIILEITKGLSA RQALSLDSVFRALADENYHLCRIRLADFIDMYRDTKVCRPPVPAK >gi|292606564|gb|ADGG01000046.1| GENE 46 38001 - 39920 1838 639 aa, chain - ## HITS:1 COG:L37667 KEGG:ns NR:ns ## COG: L37667 COG3378 # Protein_GI_number: 15672011 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Lactococcus lactis # 288 620 156 487 542 60 20.0 9e-09 MNKYIELQQGTKIPAHSLDTYTTDIDKIADGALLIPENVVVVDFDHVRDDLLRDVLDKYP TRAIKTERGEHFYYRVPQQMRLYNKNNIRTYNGLVADYKTGNGGKKAMAVVKQNRVMREI INAIELDNLPELPVDLYPIYSKNTSLEDLDDGDGRNSEIFSHIKILKDKKVSDTDIGRIV NFINNKVFKTPLPIDELKATIGSAMTGESNNNGKPSFYTIDEKGKQKLNLTAIEMYMREK LDIREYRNILFYIKDDKRYEKDTLNGTNIFREIRKTLEKENIVLNTKQDSEILHLIKTDF RIEEDKNKKYPIAFRNGWCLYRDQFIKQEKIFTPFYMDVDYDPSANDENVINFIKWFCKD DEGLITLFEEILGHILMLERFPHHIFFFVAGKGKNGKSTMLNMLNNWTDGLNSTTALDQF EKETYAYDLIGKIVNLGDDIDDTYIEKSRVIKVIAGGSKIKARALYTMPVDFKSTATLIF SCNNMPTFKDKSGGMARRVVCFPCNSNVEYGKIDLDLDDKLTTDSAKSTLLNLAIKGMKR IIANGGELTITETSKALTERYLIENDSIAMFFSETDVNKLCDDMENNTFTKLYSLYQMFC DENGYTPSGKNTLSKKLDEFGFESYTGAGNVRKIRPKKW >gi|292606564|gb|ADGG01000046.1| GENE 47 39953 - 41716 1878 587 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0653 NR:ns ## KEGG: Aflv_0653 # Name: not_defined # Def: DNA polymerase family B # Organism: A.flavithermus # Pathway: not_defined # 1 579 1 562 562 461 44.0 1e-128 MTGFYDFEVFKNDWLVVFIGQDDTEIVVWNDPAILRKALEKFDCLVGFNNHNYDDLILTG IMSGYNNYEIWKLSNAIVNGGNIENKIKMMATKLPTLDTKQELDPRLSLKVIEANLGMNI VETPVDFNIDRPLEDKEVDVVIEYCRHDVETTKKVFMLRKDYFESKFDICKEFDLDKLDV KKTRANLASKVLKCSKDRLPAGVLENKDRLNIKFADELRVENIPNEILNFYKNIRQRFED GENFEILEKEKLVYSLCGVEHTFGFGGLHSAKKNYMYEGKMLYVDVGSYYPSMIINFGFM SRASEHPDLYKNLYDTRMEYKAKKDNKQQIYKILLNSTFGALKSEFNDLFDPVMSNNICV NGQLILTDLIMNLRPYTELVQSNTDGILVKYKEKDLDTIKTICSEWELNYGLTLDYEYVE KIVQRDVNNYIWKTEDGKIKGKGLFDKYAGGDFEKNNLTVIDMALKEYYINNKDVRDTIT NMILNGNVTPLQQVAKMGNSYDIMEHNGQEVQKVNRIFATWDNKYGAINKVKNNNGVKKY TKIANSSDKCYINNDVIEKTDTNLIDIDYYVRLVEKNKFIDENYKLF >gi|292606564|gb|ADGG01000046.1| GENE 48 41791 - 42198 522 135 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0652 NR:ns ## KEGG: Aflv_0652 # Name: not_defined # Def: hypothetical protein # Organism: A.flavithermus # Pathway: not_defined # 20 135 29 156 156 66 35.0 4e-10 MSLADIFKELEGVKTEKDFSVADGEYVGIVEKLEYRTSQKGNPYFSFTVNLIEENKKYFG NLWLSDKSVKFSVAKFKSIIENLTGTPLTVEDFVNEQELVEKLNEKIVGTEVVLKLKTSN KGYQNFLMEKNEMPF >gi|292606564|gb|ADGG01000046.1| GENE 49 42456 - 42638 272 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783582|ref|ZP_06748906.1| ## NR: gi|294783582|ref|ZP_06748906.1| hypothetical protein HMPREF0400_01576 [Fusobacterium sp. 1_1_41FAA] # 1 60 1 60 60 74 100.0 2e-12 MTRGGKREGAGRKKLNEEKKKITKSFRINQELLIEIEKKFPNLTLSSIIEKALIEYVEKK >gi|292606564|gb|ADGG01000046.1| GENE 50 42631 - 42786 58 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNISILTLSIIISILILVNFYFKSIVLAIITLILCIYNLIRWFKERKRYD >gi|292606564|gb|ADGG01000046.1| GENE 51 43096 - 43743 777 215 aa, chain - ## HITS:1 COG:no KEGG:JDM1_0485 NR:ns ## KEGG: JDM1_0485 # Name: not_defined # Def: phage NTP-binding protein # Organism: L.plantarum_JDM1 # Pathway: not_defined # 2 213 3 227 238 174 42.0 2e-42 MILPKNEPKKADVTPKNILIWGESMSGKTYLAKEFESPLIINTDGNATKIRTPSVFVKNF TEFSEVIAELEKGEHTYKTLIIDLIDDIETMLVNHICELAKVESLADIAFGKGFNKFNSV WKNLMMTLTQMNMNVIFISHIVEKMDGQTSYQAPALSQKCLNACMGRCDIVIKTQKIGNN YIRLCTNKREAYKEEDIQDKKVLEILKTIKNVFVK >gi|292606564|gb|ADGG01000046.1| GENE 52 43767 - 44450 797 227 aa, chain - ## HITS:1 COG:no KEGG:Mmc1_1237 NR:ns ## KEGG: Mmc1_1237 # Name: not_defined # Def: hypothetical protein # Organism: Magnetococcus_MC1 # Pathway: not_defined # 2 221 9 229 237 144 35.0 3e-33 MLVKINNNDVMVKEFQGQRVVTAWDIAKVHEREVNDVTKNFNNNRSKFILGEDYFLINRT EISERKISIQEFIPNNVKEIPLFTESGYLMLVKTFTDDLSWKVQRELVKGYFIAKEVIKP LTPAEQLLAQAKVMVDMENRLNILEKNNARLENHLRRTITNEYFTVIGYANFRGINANTY NSSVIGRKASKICKDCGLAIGKVIDSKYGTINTYPLDVLDEIFALIN >gi|292606564|gb|ADGG01000046.1| GENE 53 44472 - 45410 898 312 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0650 NR:ns ## KEGG: Aflv_0650 # Name: not_defined # Def: phage-related protein, endonuclease of lambda exonuclease family # Organism: A.flavithermus # Pathway: not_defined # 9 312 8 294 297 224 44.0 2e-57 MINNNVSENITKNRNKYIGGSDIPALFNVSEYKSYYELAKEKAGCLRGVYKGSEYTRYGQ LLEPFIRDYVNAIYNLKFRENTAIDDILGLRSNCDGLDKEAGLLLEIKTNGGNRDSVEDY VLQMQLYMYQFDVSKGYLVQYKRPDDFYRGFDYEIHNSDDYFNLEFDENRITIKEIDRDD ELIKEILRKAEIFWSDVERLKANPEMSEAEFYFKNEITEYRNTVTKLSRLENELQKLKNI ENEAKEQREILYNLMQKYNVKSMETEHLQITRVNPTQALTIDSTKLKEEQPELIEKYSKI SNRKGYVRIKCK >gi|292606564|gb|ADGG01000046.1| GENE 54 45400 - 46602 915 400 aa, chain - ## HITS:1 COG:ECU03g1530 KEGG:ns NR:ns ## COG: ECU03g1530 COG0553 # Protein_GI_number: 19173110 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Encephalitozoon_cuniculi # 1 392 795 1237 1256 77 24.0 3e-14 MKLYKYQQELIDNSHKNYIYPLDTGTGKTIISINHYWKHAQGKKLLIVAPAQKVREGGWD REINKFKTYNKIDNIDYKVISYHKLADAKVDKDTFIIFDECHYIKNYKGTQRSRFALTHS RQADGFCLLSATPASNGYQDLGNYFSIFGFYSSGYKYEKEFAVKQFNNIGFWEIKHWKNT DKIDEMWKSISSKALMKEDCVDLPPLVFEEKYFDAGKEYIAIKKDRYWNGILYDNTSKVI AGLRQSAGIKDKLEYLKEFRANTDANILIFYNFNREAKEIKKIMKVDYEVSGAVSNIPKF DDYDTLKGKTTLVQIQAGGAGIELQYNTEVIFFSPTWSYQDYSQALGRAYRIGQKNKVTV YKYIGNRTIEECVYARLDEKKDFAEKLLTDEDLGGNFDDK >gi|292606564|gb|ADGG01000046.1| GENE 55 46599 - 46925 252 108 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0648 NR:ns ## KEGG: Aflv_0648 # Name: not_defined # Def: RecB family endonuclease # Organism: A.flavithermus # Pathway: not_defined # 14 97 1 83 105 89 53.0 5e-17 MKDNNVKNKDIKELKEKAVENKIKKWLKDKGYWFFKVHGSIFQPSGIPDILACIDGKFVA IEVKRTKGGVVSPLQKAQIAKIKENGGIAGVASSMEEFLEILKEGKLL >gi|292606564|gb|ADGG01000046.1| GENE 56 46915 - 47163 380 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783588|ref|ZP_06748912.1| ## NR: gi|294783588|ref|ZP_06748912.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 82 1 82 82 115 100.0 6e-25 MYYDYFEGFEYYIEKDDDKFYIYIQVDKKYRTIAKNYEWYVKTKDKLWLVIESKNNTLNS VVYEAKDVIYNLRTQWRLDSER >gi|292606564|gb|ADGG01000046.1| GENE 57 47163 - 47393 343 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783589|ref|ZP_06748913.1| ## NR: gi|294783589|ref|ZP_06748913.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 17 76 1 60 60 107 100.0 3e-22 MTMIMMIGLMMMRRTIMNKIMLTVKEASAITNIGVARLKMLMNEYPDFPYLKIGVKYLII ADKLVEWLNNHRGEVF >gi|292606564|gb|ADGG01000046.1| GENE 58 47338 - 47652 753 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783590|ref|ZP_06748914.1| ## NR: gi|294783590|ref|ZP_06748914.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 79 10 88 113 126 100.0 4e-28 MNNNYMGREMLITVDEKGIYRGYVQLDSNDDIFRLDYAEKMKIESLDDDWYVVVEPMDEY TNNRAWIENKCMDIINVLVEDDWFDDYDDDYDDWFDDDEEDDYE >gi|292606564|gb|ADGG01000046.1| GENE 59 48023 - 48829 1072 268 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783591|ref|ZP_06748915.1| ## NR: gi|294783591|ref|ZP_06748915.1| prophage Sa05, DNA-binding protein [Fusobacterium sp. 1_1_41FAA] # 1 268 1 268 268 487 100.0 1e-136 MATKTQEIIAKRLKEKREDSKLTLDDVSKIIGISTVTLHKYENLGILNIPVDKIEQLANL YNTNPSYIMGWSDIDNKSGNSRMDSLDVRVYNRYLNIIRGHERLKQIREHNEFTPLEFAT MLDISVDELELLENGEQDIPLNVIKGLENIFHVPKEVWLIGDGISDETRDYIEKIAENQK REKEEFIFNCMLDLLKNDGYDIDIMKQGTAQEYWRITKYELPVDIVNIKKEKLIDISVRV KNYLIDLLKAYEFGYNRILEKRFDKLKF >gi|292606564|gb|ADGG01000046.1| GENE 60 48842 - 49957 868 371 aa, chain + ## HITS:1 COG:L55605 KEGG:ns NR:ns ## COG: L55605 COG0582 # Protein_GI_number: 15673415 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 18 364 10 349 359 125 29.0 1e-28 MQKKKSNGEGSIITTTLNGKPYYKASVTIGFDSAGKQIKKSFGSYKKSVVLEKMNKVKYE AKNNLLSNSNITFGDLFKQWIFNHKKVEVSDNTFGEYETAYRLRILPYNISNKRVNQITL NDLQMYFNELQEKFSTNTIKKAYIQIHSCFKFAIIQGILNKNPCLGVTLQKEKKKEKYNV FSKQEQELILNTLNKKDIVDCLIYFTFFTGLRLGEVLALKWTDVKGKILSVERQYNRTVT IKDIGVSKLTYEFKDLKTKNSKREIPLPDKALVILEGIPKTYELIFSDEGKPIERKRPQR RITALCKKLNLEHRSFHSIRHSYATRLFELDVPIKTVQSLMGHSDMDTTMNIYTHVMQDK KMEIIDKLNNL >gi|292606564|gb|ADGG01000046.1| GENE 61 50104 - 50298 476 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHLWLNWIEHLTTDQRVVGSTPARCARKCLSGGIGRRTRLKIWNSSECAGSSPASGTILI SNFS >gi|292606564|gb|ADGG01000046.1| GENE 62 50397 - 51371 823 324 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 312 8 324 329 321 52 5e-87 MSKVLLEVKNLKKYFQTPKGQLHAVDNVNFAIEEGKTLGVVGESGCGKSTTGRTILRLLE ATDGEIIFEGKNIREYSKAEMKKLREEMQIIFQDPFASLNPRMTVSEIIAEPLIIHNKCK TKEELNNRVKELMDTVGLSQRLVNTYPHELDGGRRQRIGIARALALNPKFIVCDEPVSAL DVSIQAQVLNLMKDLQEKLGLTYMFITHDLSVVKYFSNDIAVMYLGELVEKAPSKDLFKN PIHPYTKALLSAIPTINIRKKMERIKLEGEITSPINPGVGCRFAKRCVYATEICSKESPK LEKVGEAHFFACHRAKELGFVDEK >gi|292606564|gb|ADGG01000046.1| GENE 63 51364 - 52371 629 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 23 321 35 328 329 246 42 2e-64 MENRNLLEIRDLVIQYVKDDETVHAVNSISVDIAEGETLGLVGETGAGKTTTALGIMRLI TGPTGKIKSGSIKFNDKSILEIPEEEIRKIRGNDISMIFQDPMTSLNPVMTVGEQIAEVI EIHEHISKEEAMNKAAEMLELVGIPGARKNDFPHQFSGGMKQRVVIAIALACNPKLLIAD EPTTALDVTIQAQVLDLMTDLKNKFRTSMLLITHDLGVVAQVCDKVAIMYAGEIVEYGSL EDVFENPKHPYTLGLFGSIPSLDEEKTRLVPIKGLMPDPTNLPTGCKFNPRCPHATELCS QRAPIVSEISKGHKVQCLIAEGLVKFKENWEEENE >gi|292606564|gb|ADGG01000046.1| GENE 64 52390 - 53259 1238 289 aa, chain - ## HITS:1 COG:FN0398 KEGG:ns NR:ns ## COG: FN0398 COG1173 # Protein_GI_number: 19703740 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 289 1 289 289 493 96.0 1e-139 MEKSKNKKQSQWAEVFRMLKKNKMAMLGLVILVVLVLLALFADVIADYDTIVIKQNLAER LMPPNGKHWLGTDEFGRDIFARLIHGARVSLKVGILAISISVVVGGILGAVSGYFGGVID NVIMRVVDIFLAVPSILLAIAIVSALGPSMLNLMISISVSYVPNFARIVRASVLSIRDQE FIEAAKAIGASNTRIILKHIIPNSLAPVIVQGTLGVAGAILSTAGLSFIGLGIQPPAPEW GSMLSGGRQYLRYAWWVTTFPGVAIMITILSLNLLGDGLRDALDPRLKQ >gi|292606564|gb|ADGG01000046.1| GENE 65 53269 - 54195 282 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 62 307 40 316 320 113 27 3e-24 MYKYILKRLVLLIPVMLGVTLLVFAIMYLTPGDPAQLILGESAPKEAVAALREKMGLNDP FFMQYLRFVKNAIVGDFGRSYTTGREVFEEIFARFPNTVVLAVLGVIISIVIGIPVGIIS ATKQYSLTDSFSMVLALLGVSMPVFWLGLMLILLFSVKLGIFPSGGFDGFRSVILPSVAL GVGSAAIVTRMTRSSMLEVIRQDYIRTARAKGVAEKVVINKHALKNALIPIITVVGLQFG GLLGGAVLTESVFSWPGVGRLMVDAIRQKDTPTVLASVVFLAVVYSVVNLLVDLLYAFVD PRIKSQYK >gi|292606564|gb|ADGG01000046.1| GENE 66 54266 - 55804 2362 512 aa, chain - ## HITS:1 COG:FN0396 KEGG:ns NR:ns ## COG: FN0396 COG0747 # Protein_GI_number: 19703738 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 509 1 507 511 892 83.0 0 MKKKFGLLMTIILSMLLLVACGGSGEKKEGGDAGAGTAKDTLVIAQGADAKSLDPHASND NPSSRIRVQIYDRLMELDDNGVPQPMLAESWERPDDKTIIFHLRKGVKFHNGDEMKASDV KFSLERALASPEVAEIISGINSVEVLDDYTVKVTTEKPMAAILNNLAHTTIAILSEKATK EAGDKFGQNPVGSGPYKFVSWQSGDRITLEAFPEYWQGEAPTKNVIFRNIVEDTNRTIGL ETGELDIVYDISGMDKNKLKDDDRFVLIEGPQASLTYLGFNMKKAPYDNPKVREAISYAI DQKPIIDTVFLGAGDPANSIIGPNVWGHYDVEKFTQDIEKAKALLAEAGFPNGFKAKIWV NDNPVRRDIAVILQDQLKQIGIDLAIETVEWGAFLDGTARGDHEMFLLGWGTVTRDPDYG IYELVSTSTMGSAGNRSFYSNPTVDKLLEEGRTELDPEKRKAIYKEIQEIIRKDIPMYMI IYPLQNVVTQKNIKNFKLDSAQSHKIYGVIKE >gi|292606564|gb|ADGG01000046.1| GENE 67 55905 - 57419 2117 504 aa, chain - ## HITS:1 COG:FN0396 KEGG:ns NR:ns ## COG: FN0396 COG0747 # Protein_GI_number: 19703738 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 504 1 510 511 809 76.0 0 MNKRLGLLTVVILSILFLVACGGDVEKKDSTAKDTLVVAQGADVKSLDPHASNDNPSSRV RVQIYDRLVQLDDNGVPQPMLAESWERPDDTTTIFHLRKGVKFHNGDEMKASDVKFSLER ALKAPEIFYIIEGINGIEVLDDYTVKVTTEKPMAALLNNLSNGTIAILSEKATTEAGEGF GQHPIGTGPYKFVSWQSGDKITLEAFPDYWQGTPSIKNVVFKSIVEETNRTIGLETGELD VVYDILGMDKVKLREDERFTFIEEPQLALTYLGFNLKKEPYNNPKVREAISYAIDQKPII DTVFLGAAEPANSILGKNIFAYYDVEKFTQNIEKAKALMAEAGYPDGFKAKLWVNDNPVR RDTAVILQDQLKQIGIDVAIETLEWGAFLDGTARGEHEMYILGWVNTARDPDMYELVSSS TMGAAGNRAFYSDPEMDKMLAAGKVELDPEKRKEIYKEIQIKIRKDIPMYMIAYPLQNVV TQKNIKNFKLDPAQEHTIFGVVKE >gi|292606564|gb|ADGG01000046.1| GENE 68 57700 - 57957 429 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739403|ref|ZP_04569884.1| LSU ribosomal protein L28P [Fusobacterium sp. 2_1_31] # 1 85 1 85 85 169 100 3e-41 MQRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLNVNGSPIKVKVCARTLKTLKGAS EVEVMRILKANIATLSERLLKHLNK >gi|292606564|gb|ADGG01000046.1| GENE 69 58123 - 61305 4347 1060 aa, chain - ## HITS:1 COG:FN1950_2 KEGG:ns NR:ns ## COG: FN1950_2 COG4625 # Protein_GI_number: 19705252 # Func_class: S Function unknown # Function: Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain # Organism: Fusobacterium nucleatum # 629 1060 1 432 432 583 68.0 1e-166 MKKGILKSKMMLIALASVLFVSCGGGGGGGGGGGGGGGSSNLPVKPGTNPSTPSRPKVAE DSFPIVGTNLDKTNMSALKTNLYTAQKNSGTSIPKDTSTIDGSGVKVAILDTNFIDAVRS GGNSAEDDKGNSVIARRNKTLTYMYESVEIVNENPNHPYVEDSGKNIIPGTEKPTGLEHG EEVLEVVGDLKAAPNNHASFLGSTNKANNKIGVILGSIGWDYKYSEGGTIKKKIAGIFAT QEIYEDAMARFGNQSVKIFNQSFGSKGESYDEAKYRSYRGEGNLGLAFAKMNSTDEPNYM IPYFRYAVENEGGLFVWAAGNDQNKSASLEAGLPYFDNELEKGWIAVVGVSPQKGSKYNV LDKLSKAGNEAAYWSISASERGVKKLTMAYLSLEVPIGSSYAAPKVTRAAALVYDKYDWM TADQIRQTLFTTTDKTELTQDPATMSEANLRNVTVFPDSTYGWGMLNEKRALKGPGAFIN VSKYSDTSTFRANLPAGKVSYFDNDIYGNGRLEKLGAGTLHLTGNNSFSGGSTVTAGTLE IHQIHSSPITVRTGGTLVLNPKAIVGYDSSSFNLIGTVDPQKITSSGIKVKNYGNVKFRG TTAIIGGDYVAYTGSNTQVGFKNSVKVLGNIRIQNASVSVLSDDYITKNETSTIMEAQSI EGNISKVETNGMRTANAEIKDGKIVATLSRQNVVDYVGEEASASAKNVAENVEKVFEDLD QKIEKGVATKNEILAARNLQTMASSTFTSATEVMSGEIYASAQALTLSQAQDVNRDLSNR FSRIDNLKNSNEDTEVWFSALGGAGKLKREGYASADTRVVGGQAGVDKRFTATTTLGVAL NYSYAHADFNKYAGESKSDMVGLSVYGKQDLGNDFYLAGRLGVANVSSKVERELLTATGD RVNGKISHHDKMLSTYLEFGKKFNWFTPFVGISQDYLRRGSFDESNATWGIKADKKTYRA TNFLVGARAEYVADKYRLHTSISHSINTDKRDLAYEGRFTGSNVSQKYYGVKQAKHTTWL GFGVFREISPAFGVYGNIDFRIESNKGRDSVFSTGIQYRF >gi|292606564|gb|ADGG01000046.1| GENE 70 61472 - 62332 1030 286 aa, chain + ## HITS:1 COG:FN1427 KEGG:ns NR:ns ## COG: FN1427 COG0384 # Protein_GI_number: 19704759 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Fusobacterium nucleatum # 1 286 8 293 293 471 82.0 1e-133 MRIFVCDAFSSEVFKGNQAGVVILDEKENFPDENFMKNIAAELKHSETAFVKKIDNKVFK IRYFTPTDEVDLCGHATISVFSTLRSLKIIDSGKYIAETLAGNLEIIVDKDFIWMDMSLP KVEYIFNLDEIKELYSAFNLDLSQAPKNLVPKIVNTGLSDIIIPIEDKEVLDSFIINKEK VIELSKKYNVVGAHLFSLDKEKNFTAFCRNIAPLVGIDEECATGTSNGALTHYLKEYNII SAKDINSFRQGEAMQRASTILSRYKEDGATIQVGGNAVISFECKLY >gi|292606564|gb|ADGG01000046.1| GENE 71 62383 - 63159 716 258 aa, chain - ## HITS:1 COG:no KEGG:FN2055 NR:ns ## KEGG: FN2055 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 41 258 1 218 218 334 84.0 2e-90 AWSILNFLDFKELRAYWVDTSGNDLIKDVLKNITKNTIEALERLFNGEGLKQNISGTSDL SKLLSEDELWELMLFSGYLTVEEKIDQKNYVLRLPNKEIKELFRDTFLEKYFGRGSKLLY LMEALTENRIDEYEERLQEILLTSVSYNDTKKGNEAFYHGLIMGMGLYLEGEYITKSNIE SGLGRYDFVIEPKNKTKRAFIMEFKSTDNIEKLEEVSKEALEQIENKKYDVSLKQNGVKD ITYMGIAFCGKEIKIEYK Prediction of potential genes in microbial genomes Time: Thu May 19 22:25:00 2011 Seq name: gi|292606563|gb|ADGG01000047.1| Fusobacterium sp. 1_1_41FAA cont1.47, whole genome shotgun sequence Length of sequence - 16658 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 4, operones - 3 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 911 982 ## Lebu_0003 protein of unknown function DUF1703 - Prom 941 - 1000 11.0 - Term 950 - 992 2.0 2 2 Op 1 18/0.000 - CDS 1006 - 1719 281 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 2 Op 2 19/0.000 - CDS 1719 - 2501 278 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 4 2 Op 3 24/0.000 - CDS 2491 - 3471 1217 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 5 2 Op 4 20/0.000 - CDS 3471 - 4358 1263 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components - Prom 4423 - 4482 8.4 - Term 4454 - 4492 -0.9 6 2 Op 5 . - CDS 4524 - 5678 1779 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 5709 - 5768 11.4 - Term 5760 - 5805 3.9 7 3 Op 1 . - CDS 5820 - 6392 732 ## gi|294783609|ref|ZP_06748933.1| ABC transporter substrate-binding protein - Prom 6467 - 6526 4.0 8 3 Op 2 . - CDS 6528 - 7253 914 ## gi|294783610|ref|ZP_06748934.1| lipoprotein - Prom 7281 - 7340 16.5 - Term 7358 - 7387 1.4 9 4 Op 1 . - CDS 7420 - 16179 11357 ## FN1449 hypothetical protein 10 4 Op 2 . - CDS 16225 - 16656 192 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 Predicted protein(s) >gi|292606563|gb|ADGG01000047.1| GENE 1 2 - 911 982 303 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 302 3 303 545 335 60.0 2e-90 MKRLAIGVSDFKHLIEEDFYYFDKTKFIEEIIKDGSQVKLFARPRRFGKTLNMSMLKYFF DIENKEENKKIFKDLYIEKTEAFKEQGQYPVIFLSLKDLKALTWEEMEEKITIIVSELFS EYNYLINELVETDSDKFKKIINENANLSNLGRSLKFLTKILYEKYNKKVVVLIDEYDSPL VSAYINGYYEKAKDFFKTFYSSVLKDNSYLQMGVLTGIIRVIKAGIFSDLNNLRTYTILS DVYTDSYGLTEEEVEKSLKYYGIEQEISNVKDWYDGYRFGDSEVYNPWSILNFLDFKELR AYL >gi|292606563|gb|ADGG01000047.1| GENE 2 1006 - 1719 281 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 232 1 237 245 112 27 1e-24 MAMLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSI IFEGKDLLKEKAHNICKLGIAQVPEGRRIFSQLAVKDNLKLGQFTIKDSAEKKEEDRANF YKVFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVI RQLKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGNAKDLLHNDRVKKAYLGG >gi|292606563|gb|ADGG01000047.1| GENE 3 1719 - 2501 278 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 248 33 254 329 111 28 3e-24 MENKKPLLVAKDISISFGALKAVDKFNLEIKSGELIGLIGPNGAGKTTVFNILTGVYNAS SGEYTLDGEDVIRTSTSALVKKGLARTFQNIRLFKYLSVLDNVVAAYNFRMKYGILTGMF RLPSYWKEEKAAKEKAMELLKIFDLDKYANMHAGNLPYGEQRKLEIARAMATEPKILLLD EPAAGMNPKETEDLMNTIKLIRDKFGIAVLLIEHDMKLVLGICERLVVLNYGQILASGDP QEVINNPKVVEAYLGKEEDE >gi|292606563|gb|ADGG01000047.1| GENE 4 2491 - 3471 1217 326 aa, chain - ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 42 326 1 285 285 432 96.0 1e-121 MDKNKKLSYIATYAVLLILYFILFSLINSGFISRYQIGIIILILINVILAASLNITVGCL GQITLGHAGFMSIGAYTAALLTKSGFLSGYPGYIVALIVGGIVAGIIGFIIGIPALRLTG DYLAIITLAFGEIIRVLIEYFKFTGGAQGLTGIPKVNNFTLIYFITIFSVIFMYSIMTSR HGRAVLAIREDEIASGASGINTTYYKTFAFVLSAIFAGIAGGIYAHNLGILGAKQFDYNY SINILVMVVLGGMGSFTGSILSAIVLTILPEVLRSFAEYRMIVYPLILIIMMLFRPKGLL GREEFQISKIISYFTNKSKRGENNGK >gi|292606563|gb|ADGG01000047.1| GENE 5 3471 - 4358 1263 295 aa, chain - ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 1 295 14 308 308 456 89.0 1e-128 MEFLLQIINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMIGAYVSLFSIPALSSMG LPVWVSVIPAIIICAIVGCLAERIAYRPLRNSPRISNLITAIGVSLFLENVFMKVFTPNT RSFPKIFTQDPIKLGDSVQISFGAVVTIVVTVILSIALQLFMKKTKYGKAMIATSQDYSA SALVGINVDRTIQLTFAIGSGLAAVAAVLYVSAYPQIQPLMGSMLGIKAFVAAVLGGIGI LPGAVMGGFILGIVESLTRAYLSSQLADAFVFSILIIVLLFKPTGILGKNVKEKV >gi|292606563|gb|ADGG01000047.1| GENE 6 4524 - 5678 1779 384 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 1 384 1 383 383 645 90.0 0 MKKKLVTTLLGASLLLAACGGEKAAEKPATAEAETIKIGALGPLTGGVAIYGISATNGLK LAVDEINANGGILGKQIELNLLDEKGDSTEAVNAYNKLVDWGMVALIGDITSKPSVAVAE VAAQDGIPMITPTGTQLNITEAGSNVFRVCFTDPYQGEVLAKFTKDKLAAKTVAIISNNS SDYSDGVANAFAAEAEKQGIQVVAREGYSDGDKDFKAQLTKIAQQNPDVLFVPDYYEQDG LIAIQAREVGIKSVIVGPDGWDGVVKTVDPSSYAAIENVFFANHYSTKDSNEKVQNFIKN YKEKYNDEPSAFSALSYDAAYILKAAIEKAGTTDKEAVAKAIKELEFEGITGHLTFDEKN NPIKSITIIKIINGDYTFDSVISK >gi|292606563|gb|ADGG01000047.1| GENE 7 5820 - 6392 732 190 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783609|ref|ZP_06748933.1| ## NR: gi|294783609|ref|ZP_06748933.1| ABC transporter substrate-binding protein [Fusobacterium sp. 1_1_41FAA] # 1 190 4 193 193 340 100.0 2e-92 MKKVLLNLVLVFSVFCLLGCGGKKEVDLVKIEKKFTEENFFKQTGINYLFGKDGDGHYIS FSKVYNNSSYDTEVVTFKIFKDEVYEINIHTSCPNKEGFDRAYYPEYQVVKDRLDGIFSI IKTGINDEELIKTLEVVVEELKMNPSKKTGPDGDYYSDKKNYETSKFTIETDNLLNSKFI YITSKEIPKI >gi|292606563|gb|ADGG01000047.1| GENE 8 6528 - 7253 914 241 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783610|ref|ZP_06748934.1| ## NR: gi|294783610|ref|ZP_06748934.1| lipoprotein [Fusobacterium sp. 1_1_41FAA] # 1 241 4 244 244 424 100.0 1e-117 MKKVLLNLVLVFSVFCLLGCGGPNKDPKVAEEIVTIVQQIVDYYNVPKNEIKITYGTDPM TMTKKEQELAKNIKIEVIDVLSVDDFIDYRIKELEKVYKKQEEQRGNDPFYVSKTLPTKE ELKEKYKKRNIESFYKYSVQADVVVFEDEIIMNGVPDLEAGRKMIKIEADSLKEENLSNL KYETVEAFDYVGYVSENKPLIFISTGIPGVLGGEGTNTYSVLYNSLYDFLRARWKNITIK N >gi|292606563|gb|ADGG01000047.1| GENE 9 7420 - 16179 11357 2919 aa, chain - ## HITS:1 COG:no KEGG:FN1449 NR:ns ## KEGG: FN1449 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 841 2919 1111 3165 3165 1690 52.0 0 MTKNSLHAVEQNLRSIAKRYKSVKYSIGLAILFLMMGLSAFSEEVMSTQEIVASRENLRN SVESLQTKVSDARRENQKEIDGLRLELVKLMEQGNQVVKSPWASWQFGVNYVYNNMSGMY KGRGDKPPKYVYNSIYRRGNWEERNALDVLAGKTVNGGPITPGNENTNTWQITNGLLGGA NLKRDLSIDASTNGGREWGLVDLRKIREPLNEIEILARVSPKEVKKDKLDIPVSVTPPAT LSAPVVKPNVNKPTEAPKVELPKPPVLEIPGDPNLTFNPTISVLKVEKVGEITVNPEEVT PVDFFIDPNKYGPNPGMSYANASVYKPEYWDNKTETLTDGKYFCTWGVVPGKTTVTNLNL NVVKDETRAIVVDEGRDPAGDNFTYVGGTIRLNNKKNAGIDVQGTHMGQYEAIYPMVVKN LGTIIGVGATGVEEHAGFAFNNFDSSDDSTRVSLINDKEVINGVTKKGTIELNTPKSAGM MLRPEINQANNRYQGGLNMQFAENKADITVNGRNSVGITIVKNPKNAGTLRTDLNIIIPK GGLLASRSDAANKSAISNTGTINVQGDDSVGVSILNTIQEVKVNGIINIGTVNPTSLSAN GGSPTLANRTSGGTAGKVEGSVGVYTQVATRPVRARVYRYDKDANDRNKETEVIAVRYYD DHGRENTIENATGGKYTDSKTNSEKDRHTGQTVGTETVEVGGTINIGKYASGSYGLRNNT SKVDIEYKDKSGKTVTDYYITSGSITLTGSGKVLIDKESVGNFGAVSAGDKFDREVIKST DKDPNRVQTRESDTGKVDIHGLIKAEGAKSIGYVMLSGEGTNTGTIEVIGHNDNKITPIP GTTKENYEGSLGFYGVKGTFNNAGTIKTKDKLAHSVVVKNLEMTFNHKGTIEVDSPNSNK GNIGVFSDGKAKVNFYNNSNVFVKANSVGIYSADKDKFNTTFTNHGKLNIEIGKDSTFAY LDGNATTPLEKFFVKNADGKAVSVNILGNMGANSSLVYANDEAKALLNADYTITQGDKNA STIALLATNKSSVIVDTGKKLTTNTQVALAAVDGIVHPVGSTTVSGSTAENKGIIVSNRT NDGIGIYARDNGSKAINDGTITMNGTKAVGMYGENVTTLENKTGKSIEVKEEQSAGMYAR VTGDNTLTAQNNGKIITNKQKSVGIYLKNDTTLPTGSINPAASKLTASNKEIEIKGGTES IGIYAPASTVSRVGKVTMADTVTKSIAVYLSKGAQVTSVAKDEINLGTSTKNIAYFIKNE NTGFAASSVLGKVFGYGVGVYLEGDTTLSPTDVAKLTAASPDLNFKQGTATGDGIVGLYL KGNTDISTYNKTITVGNTVVDNKTKTDIAPAIGIYSEKQGTSLAAPYVVKANINTGTKAV GIFSAPDIPAVSPATTPTPNKSFIKYEGNQMTLGEGSTGFYVNGGTELASPTIDLNGGLV AYVTEGSTFKGGTATINLSKTGIGVYGERGAVVEVKNWIFNNKGNAAEEVRLKEGIAKVT TDKDLKPKMVLTHVINGETYLDKGKTVTAIADPGYTQEENIGLMAQGIKNTKVGITWDKG NDYEIINEGTIDFKNSIKSTAIYAESARVENKGTIKLGKDSTGIYGIYRDDSPKFKDKSN TEYSNKLEIDTTATSSISLGTGSTGMYLVNAQKLNTAAGGTIQSVTGATNNVGIYAINGK IDVPTTGTPAEKAEANAYNNKNANFNILNMKNESTITLGDGSVGIYSRVKEVAATNRNTV INTGNITVGKSLTNAPAVGIYAENTKLTNGTASVAPTITVGEKGIVFYGKNSEIVTKGTA NYNNKGVLAYLDNTIFTSHYGNLTAHQNTMLFLKNNSMANMNGAGADIDITVPDKAATSD PFAGVYVEGSTPVLNGVKKINIGKNSNGIFMNNATFTSNVNDIVSTKEGAKGLLAKNSTL TNNSKITLSGNSSIGIYSDATVSPTKTVTNNGKLTISGKKTLGVFLKGSQTFVNTADIDV ADTTSSVPAEKTVGIYTKDGTSTIKHNSGTINVGEKSIGIFSATSADVEVATPAKIDVKD EAIGIYKEKGTVLLKGEINVAPHTSTVKNSEPVGVYGLNGANITDNASKITVGAKSFGFI LENKSPATTNKYTSTNTGAVSLGADSVFLYSNGQASLTNGRNISSSSDRVIAFYIKGNGT NRGDLTNNATIDLSNSKGSIGIYAPGGKATNKGRILVGETDSIDPVTGKTYTDVTKITYG IGMAADNGGHIINDNEIRIYGDKSIGMYGKGAGTKVENNSKIILDGSRATDTNKIQSMVG VYVDQGATFVNKGDIRTADAYAGKIVNGVQKVNNNVVGLVGVAVMNGSTLENHGNIDIDA DESFGVVVRNSVIKNYGNFKINVRGRGTYGVSYKDISAADLAALEAEVNSKLKSDPRGQE LAAAGGVNKSYEGVSITIQNGKPIFTRNGVTVSDAEVELIEKIIGSATSNLGMSDVGFYV DTLGRTKPIDINGATPPINSQLIVGTEYSELTNRKEWFVKDDVITPFLQQIQGRNFKLTS IAGSLTWMATPVIDNYGQIKGVAMTKIPYTAFVKTTHNAWNFADGLEQRYGVNALDSREK RVFNLLNSIGNNEEILLTQAYDEMMGHQYANVQQRIYETGRILNKEFSYLRNEWSNPTKD ANKVKVFGTNGEYKTDTAGIIDYKYNAQGVAYVHEDETVRLGESLGWYAGIVHNKYKFDD IGNSKEEMLLGKFGMFKSVPFDENNSLNWTIAGDIFVGHNKMHRRFLVVSEIFNAKSRYY SYGIGVKNDLSKEFRLSENFTLKPYAGLRLEYGRMSKIKEKSGEVKLEVKSNDYISIKPE IGTELAYKAFFGPKSLKAAVSVAYENELGILANPKNKARVAGTSADWFNIRGEKEDRKGN VKSDLNIGIDNQRIGVTANVGYDTKGSNVRGGLGLRVIF >gi|292606563|gb|ADGG01000047.1| GENE 10 16225 - 16656 192 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 38 141 244 347 347 78 36 3e-14 TQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKD FIEQNNYELTIEGHTDSVGSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYP VATNETPEGRLQNRRVEFRLVQR Prediction of potential genes in microbial genomes Time: Thu May 19 22:27:16 2011 Seq name: gi|292606562|gb|ADGG01000048.1| Fusobacterium sp. 1_1_41FAA cont1.48, whole genome shotgun sequence Length of sequence - 46092 bp Number of predicted genes - 47, with homology - 47 Number of transcription units - 10, operones - 6 average op.length - 7.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 391 585 ## FN2051 hypothetical protein 2 1 Op 2 . - CDS 407 - 805 634 ## FN2052 hypothetical protein - Prom 846 - 905 12.3 - Term 927 - 956 -0.2 3 2 Op 1 33/0.000 - CDS 981 - 1553 932 ## COG0233 Ribosome recycling factor 4 2 Op 2 24/0.000 - CDS 1578 - 2297 1148 ## COG0528 Uridylate kinase - Term 2318 - 2357 6.2 5 2 Op 3 38/0.000 - CDS 2363 - 3256 530 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts 6 2 Op 4 . - CDS 3292 - 4035 1254 ## PROTEIN SUPPORTED gi|237739389|ref|ZP_04569870.1| SSU ribosomal protein S2P - Prom 4127 - 4186 3.8 7 3 Op 1 . - CDS 4196 - 5428 1362 ## CCC13826_0614 hypothetical protein 8 3 Op 2 . - CDS 5430 - 6119 634 ## COG3177 Uncharacterized conserved protein - Prom 6152 - 6211 7.6 - Term 6170 - 6210 5.7 9 4 Tu 1 . - CDS 6218 - 8569 3135 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 8608 - 8667 13.5 - Term 8644 - 8689 4.2 10 5 Op 1 53/0.000 - CDS 8706 - 9986 866 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 11 5 Op 2 48/0.000 - CDS 10011 - 10490 802 ## PROTEIN SUPPORTED gi|237739385|ref|ZP_04569866.1| LSU ribosomal protein L15P 12 5 Op 3 50/0.000 - CDS 10490 - 10675 300 ## PROTEIN SUPPORTED gi|237739384|ref|ZP_04569865.1| LSU ribosomal protein L30P 13 5 Op 4 56/0.000 - CDS 10688 - 11182 805 ## PROTEIN SUPPORTED gi|237739383|ref|ZP_04569864.1| SSU ribosomal protein S5P 14 5 Op 5 46/0.000 - CDS 11207 - 11575 590 ## PROTEIN SUPPORTED gi|237739382|ref|ZP_04569863.1| LSU ribosomal protein L18P 15 5 Op 6 55/0.000 - CDS 11602 - 12135 910 ## PROTEIN SUPPORTED gi|237739381|ref|ZP_04569862.1| LSU ribosomal protein L6P 16 5 Op 7 50/0.000 - CDS 12160 - 12558 655 ## PROTEIN SUPPORTED gi|237739380|ref|ZP_04569861.1| SSU ribosomal protein S8P 17 5 Op 8 50/0.000 - CDS 12587 - 12874 478 ## PROTEIN SUPPORTED gi|237739379|ref|ZP_04569860.1| SSU ribosomal protein S14P 18 5 Op 9 48/0.000 - CDS 12895 - 13446 914 ## PROTEIN SUPPORTED gi|237739378|ref|ZP_04569859.1| LSU ribosomal protein L5P 19 5 Op 10 57/0.000 - CDS 13465 - 13806 564 ## PROTEIN SUPPORTED gi|237739377|ref|ZP_04569858.1| LSU ribosomal protein L24P 20 5 Op 11 50/0.000 - CDS 13831 - 14199 594 ## PROTEIN SUPPORTED gi|197736521|ref|YP_002165299.1| ribosomal protein L14 21 5 Op 12 50/0.000 - CDS 14228 - 14479 411 ## PROTEIN SUPPORTED gi|237739375|ref|ZP_04569856.1| SSU ribosomal protein S17P 22 5 Op 13 50/0.000 - CDS 14513 - 14695 291 ## PROTEIN SUPPORTED gi|34764030|ref|ZP_00144916.1| LSU ribosomal protein L29P 23 5 Op 14 50/0.000 - CDS 14695 - 15126 742 ## PROTEIN SUPPORTED gi|237739373|ref|ZP_04569854.1| LSU ribosomal protein L16P 24 5 Op 15 61/0.000 - CDS 15129 - 15788 1105 ## PROTEIN SUPPORTED gi|19704960|ref|NP_602455.1| SSU ribosomal protein S3P 25 5 Op 16 59/0.000 - CDS 15807 - 16139 519 ## PROTEIN SUPPORTED gi|237739371|ref|ZP_04569852.1| LSU ribosomal protein L22P 26 5 Op 17 60/0.000 - CDS 16168 - 16443 492 ## PROTEIN SUPPORTED gi|237739370|ref|ZP_04569851.1| SSU ribosomal protein S19P 27 5 Op 18 61/0.000 - CDS 16468 - 17298 1443 ## PROTEIN SUPPORTED gi|197736528|ref|YP_002165306.1| ribosomal protein L2 28 5 Op 19 61/0.000 - CDS 17341 - 17628 480 ## PROTEIN SUPPORTED gi|34764036|ref|ZP_00144922.1| LSU ribosomal protein L23P 29 5 Op 20 58/0.000 - CDS 17628 - 18257 1037 ## PROTEIN SUPPORTED gi|237742671|ref|ZP_04573152.1| LSU ribosomal protein L1E 30 5 Op 21 40/0.000 - CDS 18277 - 18912 1074 ## PROTEIN SUPPORTED gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P - Prom 18973 - 19032 3.0 - Term 18938 - 18987 1.0 31 5 Op 22 . - CDS 19058 - 19369 508 ## PROTEIN SUPPORTED gi|237739365|ref|ZP_04569846.1| SSU ribosomal protein S10P - Prom 19421 - 19480 6.7 - Term 19553 - 19594 6.3 32 6 Tu 1 . - CDS 19606 - 21024 2023 ## COG2985 Predicted permease - Prom 21207 - 21266 18.0 - Term 21233 - 21286 10.5 33 7 Tu 1 . - CDS 21302 - 32344 14776 ## FN1449 hypothetical protein - Prom 32433 - 32492 7.9 - Term 32477 - 32509 2.0 34 8 Op 1 35/0.000 - CDS 32523 - 33608 1575 ## COG0206 Cell division GTPase 35 8 Op 2 . - CDS 33630 - 34946 1522 ## COG0849 Actin-like ATPase involved in cell division 36 8 Op 3 . - CDS 34943 - 35653 818 ## FN1453 hypothetical protein 37 8 Op 4 6/0.000 - CDS 35667 - 36530 1350 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 38 8 Op 5 11/0.000 - CDS 36546 - 37391 1288 ## COG0812 UDP-N-acetylmuramate dehydrogenase 39 8 Op 6 26/0.000 - CDS 37378 - 38769 1879 ## COG0773 UDP-N-acetylmuramate-alanine ligase 40 8 Op 7 4/0.000 - CDS 38774 - 39838 1227 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 41 8 Op 8 28/0.000 - CDS 39848 - 41146 1748 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 42 8 Op 9 28/0.000 - CDS 41146 - 42231 1395 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 43 8 Op 10 . - CDS 42242 - 44071 2343 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase - Prom 44148 - 44207 13.5 - Term 44194 - 44239 8.7 44 9 Op 1 . - CDS 44252 - 44923 1057 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 45 9 Op 2 . - CDS 44939 - 45535 638 ## COG4185 Uncharacterized protein conserved in bacteria 46 9 Op 3 . - CDS 45474 - 45707 225 ## gi|294783658|ref|ZP_06748982.1| conserved hypothetical protein - Prom 45838 - 45897 6.8 + Prom 45548 - 45607 10.3 47 10 Tu 1 . + CDS 45803 - 45994 153 ## gi|291461092|ref|ZP_06026918.2| conserved hypothetical protein Predicted protein(s) >gi|292606562|gb|ADGG01000048.1| GENE 1 1 - 391 585 130 aa, chain - ## HITS:1 COG:no KEGG:FN2051 NR:ns ## KEGG: FN2051 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 130 1 127 179 93 60.0 2e-18 MKKFVKAILFLFALSSIAYAEDDGMSVLNKKRAEGLNPQDEKEAMEILDGMRKKIKKEDT ETLKLQQEAKELGISTSEASSLAEIEAMVKAKKAEKAKPKTEAEKLEATRKEALDKLDFY ERVVRSVARE >gi|292606562|gb|ADGG01000048.1| GENE 2 407 - 805 634 132 aa, chain - ## HITS:1 COG:no KEGG:FN2052 NR:ns ## KEGG: FN2052 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 132 1 119 119 117 85.0 1e-25 MKGKFILGAMMLLGTISYSAEATDTVAQEVINEVKNIEAEYQALMQKEAERKEEFIQEKA NLEKEVKELKEKQLGREELYAKLKQDSKIRWHRDEYKKLLKRFDEYYNKLEQKIADKEQQ IVELTKLLEVLN >gi|292606562|gb|ADGG01000048.1| GENE 3 981 - 1553 932 190 aa, chain - ## HITS:1 COG:FN1623 KEGG:ns NR:ns ## COG: FN1623 COG0233 # Protein_GI_number: 19704944 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Fusobacterium nucleatum # 1 190 1 190 190 287 92.0 8e-78 MSIASDKLVKECEEKMLKTIEAVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGTV SAPEARLLVIDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLA KNEAENGKIAVRNIRKDINNHLKKLEKDKENPISEDELKKEETHVQTLTDKYIKEIDELL AKKEKEITTV >gi|292606562|gb|ADGG01000048.1| GENE 4 1578 - 2297 1148 239 aa, chain - ## HITS:1 COG:FN1622 KEGG:ns NR:ns ## COG: FN1622 COG0528 # Protein_GI_number: 19704943 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Fusobacterium nucleatum # 1 239 1 239 239 427 94.0 1e-120 MESPFYKKILLKLSGEALMGEQEFGISSDVITSYAKQIKEIVDLGVEVSIVIGGGNIFRG ISGAAQGVDRVTGDHMGMLATVINSLALQNSIEKLGVQTRVQTAIEMPKVAEPFIKRRAQ RHLEKGRVVIFGAGTGNPYFTTDTAAALRAIEMETDVVIKATKVDGIYDKDPVKFADAKK YEKVTYNEVLAKDLKVMDATAISLCRENKLPIIVFNSLIEGNLKRVIMGENIGTTVVAD >gi|292606562|gb|ADGG01000048.1| GENE 5 2363 - 3256 530 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 297 1 281 283 208 44 4e-53 MATVTAALVKELRERTGAGMLDCKKALETNDGDIEKAIDYLREKGITKAVKKAGRIAAEG LIFDAVTPDHKKAVILEFNSETDFVAKNEEFKEFGRKLVKLALERNAHQLEELNEAQIEG DKKVSEALTELIAKIGENMSLRRLAVVVAKDGFVQTYSHLGGKLGVIVEMSGEATEANLE KAKNIAMHVAAMDPKYLSEEEVTTSDLEHEKEIARKQLEEEGKPANIIEKILEGKMHKFY EENCLVDQVYVRAENKETVKQYAGDIKVLSFERFKVGDGIEKKEEDFAAEVAAQING >gi|292606562|gb|ADGG01000048.1| GENE 6 3292 - 4035 1254 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739389|ref|ZP_04569870.1| SSU ribosomal protein S2P [Fusobacterium sp. 2_1_31] # 1 247 1 247 247 487 99 1e-137 MSVVSMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYINNRWLGGMLTNFSTIKKRIERMKELERM DADGTLDSDYTKKEAAEFRKELSKLSKNLSGIRDMEKAPDAIYVVDVKMEELPVREAHLL GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEGNQGHEHVEPQSEEVN VEEGSVE >gi|292606562|gb|ADGG01000048.1| GENE 7 4196 - 5428 1362 410 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0614 NR:ns ## KEGG: CCC13826_0614 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 5 410 1 398 400 277 42.0 4e-73 MFEKLEKEYCLKLKDKELLSFIFSIEKGEDGETYNFFLKDINEKNQKLFPLNLEVNSSGI QKWIETRKAPKNRVLMDKVFEKIAKNKKNVMDYIDVSFGLSLNDCYWIIPSDKKNEYKWE KYNLYKNEFSEVIGNIAFTGYGEKITGIMTSPELTTNGMLKKCWHIENGKIYLYKGSTPE FANQGKEAYSEFYSSQVAKIFFENINSEKKLFPVNYELREFHNQIVSACELFTTEDKGYI PIEMLLRSKGLALKSLDSKIIVEIKKIYGKEKFEDLMIFDAVIGNTDRHLGNFGMFIDNN TNKILETAPIFDNGLSFLNHLTLEEIKDKNYIKEYNNNGFRTNRFNQTFEEVVRLYISDR HLESLEKLKNFKLKKDKNYNLPEDWLDGFENNIKENAKNFLKILKEKEEK >gi|292606562|gb|ADGG01000048.1| GENE 8 5430 - 6119 634 229 aa, chain - ## HITS:1 COG:pli0008 KEGG:ns NR:ns ## COG: pli0008 COG3177 # Protein_GI_number: 18450294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 228 5 239 254 177 39.0 1e-44 MNIIVEKMTNEYIDDLLVRAAHHSTAIEGNTLTLGDTISILIHNYIPKGMTEREYYEVKN YKKAFELLLKADRVISTDLIKNYHRYIMENLREDNGEFKKIQNIILGSVIETTKPYLVPT VIEDWCQNLEYRLNNAKTDEEKIEAILDQHIKFEKIHPFGDGNGRTGRLLIIHSCLKENL APILIPKEEKGKYINFLTSENIKEFVKWGIELENKERERIELFHNKERG >gi|292606562|gb|ADGG01000048.1| GENE 9 6218 - 8569 3135 783 aa, chain - ## HITS:1 COG:FN0501_1 KEGG:ns NR:ns ## COG: FN0501_1 COG1982 # Protein_GI_number: 19703836 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Fusobacterium nucleatum # 1 503 1 503 503 978 96.0 0 MSKLDQNKTPLFTVLKDEYVRRNILPFHVPGHKRGKGVDKEFYNFMGEAPFSIDVTIFKM VDGLHHPKSCIKEAQELLADAYGVKHSFFAVNGTSGAIQAMIMSVIKAGEKILVPRNVHK SVSAGIILSGSEPVYMNPEIDENLGIALGVKPQTVENMLKQDPDIAAVLLINPTYYGVAT DLKKIADIVHSYDIPLIVDEAHGPHLHFHDELPVSAVDAGADICTQSTHKILGSMTQMSV IHVNSDRVNVEKVKQILSLLHTTSPSYPLMASLDCARRQIATEGQELLTKAIELAKYFRR EANRIPGIYCFGEELVGKEGFFAFDPTKITISAKELGLKGGELESLLVDDYNIQMELSDY YNTLGLVTIGDTEESIDRLLDALRDISKRFFGKGKTLEKNNIKLPETPELVLMPREAFYS EKNKVPFKESVGKISGEMIMAYPPGIPIIIAGERISQDIIDHIEELKEADLHIQGMEDPE LETINVIEEEDAVYLYTEKMKNVLIGVQTNLGVNKTGTEFGPDDLIQAYPDTFDEMELIT VERQKEDFNDKKLKFKNTVLHTCEKIAKRVNEAVIDGYRPILVGGDHSISLGSVAGVSLE KEIGILWISAHGDMNTPESTLTGNIHGMPLALIQGLGDRELVNCFYEGAKVDSRNIVIFG AREIEVEERKIIEKTGVKIVYYDDILRKGIDNVLEEVKDYLKVDNLHISIDMNVFDPEIA PGVSVPVRNGMSSDEMFKSLKFAFKNYSVTSADITEFNPLNDTNGKTAELVDDIVQYMMN PDY >gi|292606562|gb|ADGG01000048.1| GENE 10 8706 - 9986 866 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 16 426 19 437 447 338 41 4e-92 MTLMEKFSSRLSSIVKIPELRERIIFTLLMFLVARVGTLIPAPGVDVDRLASMASKSDVL SYINMFSGGAFTRISIFSLGIIPYINASIVVSLLVSIIPQLEEIQKEGESGRNRITQWTR YLTIALAIIQGAGVCLWLQSVGLVYNPGISFFVRTITTLTAGTVFLMWVGEQISVKGIGN GVSLIIFLNVISRAPSSVIQTVQKMQGDKFLIPLFVLVAFLATVSIAGIVLFQLGQRKIP IHYVGKGFSSKSGIGEKSFIPLRLNTAGVMPVIFASVFMLIPGVIVNALPSDLQLKTTLS IIFGQNHPVYMILYALVIMFFSFFYTALVFDPEKVAENLRQSGGTIPGIRPGEETVEYLE GVASRITWGGGLFLAVISILPYVIFTSMGLPVYFGGTGIIIVVGVALDTIQQIDAHLVMR DYKGFI >gi|292606562|gb|ADGG01000048.1| GENE 11 10011 - 10490 802 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739385|ref|ZP_04569866.1| LSU ribosomal protein L15P [Fusobacterium sp. 2_1_31] # 1 159 1 159 159 313 98 1e-84 MKLNELTPSVPKKNRKRIGRGNSSGWGKTAGKGSNGQNSRAGGGVKPYFEGGQMPIYRRV PKRGFSNAIFKKEYTVVSLSFLNDNFEDGEEVTLETLFNKFLIKKVRDGIKVLGNGELNK KLTVKVHKISKSAQAAIEAKGGTVEIVEVKGFERAESNK >gi|292606562|gb|ADGG01000048.1| GENE 12 10490 - 10675 300 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739384|ref|ZP_04569865.1| LSU ribosomal protein L30P [Fusobacterium sp. 2_1_31] # 1 61 1 61 61 120 100 2e-26 MARLRIELVKSIIGRKPNHIATAKSLGLKKMHDVVEHNETPELKGKLAQISYLLKIEEVQ A >gi|292606562|gb|ADGG01000048.1| GENE 13 10688 - 11182 805 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739383|ref|ZP_04569864.1| SSU ribosomal protein S5P [Fusobacterium sp. 2_1_31] # 1 164 1 164 164 314 98 5e-85 MLNREDNQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRK AIAAAKKNIVKISLKNNTIPHEITGRWGATTLWMAPAYEGTGVIAGSASREILELVGVHD ILTKIKGSRNKHNVARATVEALKLLRTAQEIAALRGLEVKDILS >gi|292606562|gb|ADGG01000048.1| GENE 14 11207 - 11575 590 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739382|ref|ZP_04569863.1| LSU ribosomal protein L18P [Fusobacterium sp. 2_1_31] # 1 122 1 122 122 231 99 4e-60 MFKKVDRKASRQKKQMSIRNKISGTPERPRLSVFRSNTNIFAQLIDDVNGVTLVSASTID KALKGSIANGGNVEAAKAIGKAIAERAKEKGINAIVFDRSGYKYTGRVAALAEAAREAGL SF >gi|292606562|gb|ADGG01000048.1| GENE 15 11602 - 12135 910 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739381|ref|ZP_04569862.1| LSU ribosomal protein L6P [Fusobacterium sp. 2_1_31] # 1 177 1 177 177 355 100 4e-97 MSRVGKKPIAVPSGVDFSVKDNVVTVKGPKGTLTKEFNKNITIKLEDGHITFERPNDEPF IRSIHGTTRALINNMVKGVSEGYRKTLTLVGVGYRAAAKGKGLEISLGFSHPVIIDEIPG ITFTVEKNTTIHIDGIEKELVGQVAANIRAKRPPEPYKGKGVKYADEHIRRKEGKKS >gi|292606562|gb|ADGG01000048.1| GENE 16 12160 - 12558 655 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739380|ref|ZP_04569861.1| SSU ribosomal protein S8P [Fusobacterium sp. 2_1_31] # 1 132 1 132 132 256 99 1e-67 MYLTDPIADMLTRVRNANAVMHEKVDIPHSKMKERIAEILKEQGYISNFKIVTDEENKKN IRVYLKYAGKERVIKGLKRISKPGRRVYSSVEDMPRVLSGLGIAIVSTSKGVITDKVARA EKVGGEVLAFVW >gi|292606562|gb|ADGG01000048.1| GENE 17 12587 - 12874 478 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739379|ref|ZP_04569860.1| SSU ribosomal protein S14P [Fusobacterium sp. 2_1_31] # 1 95 1 95 95 188 100 4e-47 MAKKSMIARDVKRAKLVDKYAEKRAELKKRIAAGDMEAMFELNKLPKDSSVVRKRNRCQL DGRPRGFMREFGISRVKFRQLAGAGLIPGVKKSSW >gi|292606562|gb|ADGG01000048.1| GENE 18 12895 - 13446 914 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739378|ref|ZP_04569859.1| LSU ribosomal protein L5P [Fusobacterium sp. 2_1_31] # 1 183 1 183 183 356 98 1e-97 MDKYVSRYHKFYNEVVVPKLMKELEIKNIMDCPKLEKIIVNMGVGEATQNSKLIDAAMAD LTLITGQKPLLRKAKKSEAGFKLREGMPIGAKVTLRKERMYDFLDRLVNVVLPRVRDFEG VPSDSFDGRGNYSVGLRDQLVFPEIDFDKVEKLLGMSITMVSSAKTDEEGRALLKAFGMP FKK >gi|292606562|gb|ADGG01000048.1| GENE 19 13465 - 13806 564 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739377|ref|ZP_04569858.1| LSU ribosomal protein L24P [Fusobacterium sp. 2_1_31] # 1 113 1 113 113 221 99 5e-57 MARPKIKFVPESLHVKTGDIVYVISGKDKKKTGKVLRVFPKKGKIIVEGINIVTKHLKPS QVNPQGGVVEKEAAIFSSKVMLFDEKTKQPTRVGYEVRDGKKVRVSKKSGEII >gi|292606562|gb|ADGG01000048.1| GENE 20 13831 - 14199 594 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197736521|ref|YP_002165299.1| ribosomal protein L14 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 122 1 122 122 233 98 2e-60 MVQQQTILNVADNSGAKKLMVIRVLGGSKKRFGRIGDIVVASVKEAIPGGNVKKGDVVKA VIVRTRKETRRDDGSYIKFDDNAGVVINNNNEPKATRIFGPVARELRAKNFMKILSLAIE VI >gi|292606562|gb|ADGG01000048.1| GENE 21 14228 - 14479 411 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739375|ref|ZP_04569856.1| SSU ribosomal protein S17P [Fusobacterium sp. 2_1_31] # 1 83 1 83 83 162 98 3e-39 MRNERKVREGIVVSDKMEKTIVVAIETMILHPIYKKRVKRTTKFKAHDEENVAQVGDKVR IMETRRLSKDKNWRLVEIIEKAR >gi|292606562|gb|ADGG01000048.1| GENE 22 14513 - 14695 291 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|34764030|ref|ZP_00144916.1| LSU ribosomal protein L29P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 60 1 60 60 116 100 2e-25 MRAKEIREMTSEDLVVKCKELKEELFNLKFQLSLGQLTNTAKIREVRREIARINTILNER >gi|292606562|gb|ADGG01000048.1| GENE 23 14695 - 15126 742 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739373|ref|ZP_04569854.1| LSU ribosomal protein L16P [Fusobacterium sp. 2_1_31] # 1 143 1 143 143 290 99 1e-77 MLMPKRTKHRKMFRGRMKGAAHKGNFVAFGDYGLQALEPSWITNRQIESCRVAINRTFKR EGKTYIRIFPDKPITARPAGVRMGKGKGNVEGWVSVVRPGRILFEVSGVTEEKAKAALRK AAMKLPIRCKVVKREEKENGGEN >gi|292606562|gb|ADGG01000048.1| GENE 24 15129 - 15788 1105 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19704960|ref|NP_602455.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 219 1 219 219 430 99 1e-120 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT SPSQVVVHIHTGKAGLIIGRKGAEIDALRAKLEKLTAKKVTVKVQEIKDLNGDAVLVAES IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA >gi|292606562|gb|ADGG01000048.1| GENE 25 15807 - 16139 519 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739371|ref|ZP_04569852.1| LSU ribosomal protein L22P [Fusobacterium sp. 2_1_31] # 1 110 1 110 110 204 97 8e-52 MEAKAITRFVRLSPRKARLVADLVRGKSALDAIDILEFTNKKAARIIKKTLMSAVANATN NFKMDEEKLVVSTIMINQGPVLKRVMPRAMGRADIIRKPTAHITVAVSEK >gi|292606562|gb|ADGG01000048.1| GENE 26 16168 - 16443 492 91 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739370|ref|ZP_04569851.1| SSU ribosomal protein S19P [Fusobacterium sp. 2_1_31] # 1 91 1 91 91 194 100 1e-48 MARSLKKGPFCDHHLMAKVEEAVASNNNKAVIKTWSRRSTIFPNFIGLTFGVYNGKKHIP VHVTEQMVGHKLGEFAPTRTYHGHGVDKKKK >gi|292606562|gb|ADGG01000048.1| GENE 27 16468 - 17298 1443 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197736528|ref|YP_002165306.1| ribosomal protein L2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 276 1 276 276 560 98 1e-159 MAIRKMKPITNGTRHMSRIVNDELDKVRPEKSLTVPLKSAYGRDNYGHRTCRDRQKGHKR LYRIIDFKRNKLDVPARVATIEYDPNRSANIALLFYFDGEKRYILAPKGLKKGDIVSAGS KADIKPGNALKLKDMPVGVQIHNVELQKGKGGQLVRSAGTAARLVAKEGTYCHVELPSGE LRLIHGECMATVGEVGNSEHNLVSIGKAGRARHMGKRPHVRGAVMNPVDHPHGGGEGKNS VGRKSPLTPWGKPALGIKTRGRKTSDKFIVRRRNEK >gi|292606562|gb|ADGG01000048.1| GENE 28 17341 - 17628 480 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|34764036|ref|ZP_00144922.1| LSU ribosomal protein L23P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 95 1 95 95 189 100 3e-47 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAIETIFNVKVEDVATINKK PITKRHGMRLYKTQAKKKAIVKLAKENTITYFKEV >gi|292606562|gb|ADGG01000048.1| GENE 29 17628 - 18257 1037 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237742671|ref|ZP_04573152.1| LSU ribosomal protein L1E [Fusobacterium sp. 4_1_13] # 1 209 1 209 209 404 99 1e-112 MAVLNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGG GRKPFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAA GNVLVLDYEGIDTPKTKVIVNLVNKVDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQP NEIGVYWLLKQEKVILTKEALAVVEEVLG >gi|292606562|gb|ADGG01000048.1| GENE 30 18277 - 18912 1074 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31] # 1 211 1 211 211 418 99 1e-116 MSGILGKKIGMTQIFEDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT KPLMGIFNKAGVKPQRFVRELAVETVEGYELGQEIKVDVLAEVGYVDITGTSKGKGTSGV MKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKVD VEHNLLLIKGAVPGAKNSYLVIKPAVKKVIG >gi|292606562|gb|ADGG01000048.1| GENE 31 19058 - 19369 508 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739365|ref|ZP_04569846.1| SSU ribosomal protein S10P [Fusobacterium sp. 2_1_31] # 1 103 1 103 103 200 100 1e-50 MASNKLRIYLKAYDYTLLDESAKRIAEAAKKSGATVAGPMPLPTKIRKYTVLRSVHVNKD SREQFEMRVHRRMIELVNSTDKAISSLTSVHLPAGVGIEIKQV >gi|292606562|gb|ADGG01000048.1| GENE 32 19606 - 21024 2023 472 aa, chain - ## HITS:1 COG:FN1450 KEGG:ns NR:ns ## COG: FN1450 COG2985 # Protein_GI_number: 19704782 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 5 472 1 468 468 767 90.0 0 MHFDLVGFIFNSLVLLFFTMTLGNLFGDIKFKKFNFGITGTLFIGLFVGYFLTKYAVTIP EGSKFFTKAQNVLKGNIIDSSIMNLSLLIFIVGTGLLAAKDMKYAITKFGKQFVILAIFI PFVGAVASYGFSKALKNMSPYQITGTYTGALTSSAGLAAATESSESESKHSAANFENLDE GTKVKILAIINNAKERDAKLKNEAIPEKMTVENTTSLSAEDTEIYVTEAKAGVGVGHSIG YPFGVLFLILGINFIPRMFRFDVEKEKEKYFAQKKIDLSNVKDSEKNTIPEVKMDFVGFS IAAFLGYFLGSIKIAMGPLGTFSLGSIGGAIIVALILGSIGKIGPINFRMDSVVLGKMRT YFLSIFLAGTGLNYGFRVVEAVTGDGIMIAVVSALVAILSVLFGFLLGHYVFHVNWTLLS GAITGGMTSAPGLGAAIDALDSDEPAISYGATQPLATLCMVIFSIIIHKLPI >gi|292606562|gb|ADGG01000048.1| GENE 33 21302 - 32344 14776 3680 aa, chain - ## HITS:1 COG:no KEGG:FN1449 NR:ns ## KEGG: FN1449 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 583 3680 1 3165 3165 2947 63.0 0 MGNNLHKIEKDLRSIAKRYKSVKYSIGLAILFLMLGVSAFSEEVNTEQSVAQVATREELK TSVGSVQAKLNNLRNDNKKEIEDSKLELIQLMEQGDQVVKSPWASWQFGANYFHEKAKGE YKGRGDKSKKYIYTAEYLRGDWKERNAMDSLENQKVGGTPLTPGNDSLATWKNVSSTSSG GVKIEKNTAINSSTNGSRSWGLVDLLKIKEPTNEVEILARISPKEVNKKAVPLNIKEPKV EGIKAPIVKPNVNTPLPAPEIKLPKIETVNISPLNITAPSAPTAPTIGINVNAPSAPTAP SISVTPSTPGTVTAPTISINVTSPSITPLTITTPGSVGTINVTAPSVVPVDFILPKAGLS SEGNLNFQNRDYNKNLNGTTINVDSINSSLNPPKGNYISTWGYSKNLDGVNVNVNVNINN SRAFMVDEGIDANNTAYAPFRYEGTINLNKSQNVGIDVQGTHTSYSSGSWVNTDSKYNNI NTVANVKVTNAGIIIGNGGAGIKNQVAFGFNNFDTSTNNTRTEMINEGRITLNAEKSAGI QLRPENPHADGNTSNRRGLNMMTAYNASSGKIYINNDGSFGMLTVQNKDASGKAVASKNY SNYNVTTLPGGQIASRAQKENMSYMKNTGTINVGGTSSIGIGHLHNIQGVYAGGTINVTG NSSVGVYTSVPTRPVLAGKNDDHKLTNTSGKTVGTETVEVSGKITVSGVGSSGVYAKDTG SITLKDNRSNADADTDNKTKAEIKVTGTKSYGAVLDGVALNLEENTEISVTGKEAIGYVL KSGTGSNKGTISVTGDPGNTETTPSLGFYGEKGTFTNEKEGTISSTGKFANAVALVGNTA SGISFTNKGKIKTEGKGNIGVYADGKYTFEHSGTDASISVGTNAVGVYAKNALGTLNIKA PIEIAASGTDKDKGTTIGIYSDGNAKVKFGDDSKLTIGEGAVGLYSSDASKFNNTFEIES GKTLTVELGKNSTFGLLNGATAKDVPLSKYLNNGTTDKIEITQFDKGASLFYATSGAKAV LDEDYTVTNGNAESTSVLVANNGASVKIASGKKLETNTNVGLIANAGGAVAENEGTLEST RADKGIGIYAKAAKGNNIGTITMNNQNAVGMLGVIGSTLINTKKISLDGVSSAGMYGEDS DLTNSTTTSEINVNKEKSAGMYAKATVAATDKTSKNEGKIEIVANGTGKSAGMYSLIGSG KLTTKNTGTIKVAQDESAGIFANNTGGQSEVLSSGLVKMTGIKSVGIIGKKSEITNSGTG TGANAKGIEISGAGSAGILATNESKVINSGRIEGNTGADLVGISVDKDSTASNSGTITMK TTSNTGISSAGGAVTNTGSITLEKANSTGISSVNGNVTNSNGATITAQEGSSVGIYAKIA GKDDITVSNAGTISLTNATPAPTPPPEKSAAIYSLIDSGTGKLITTNSGTINVDQTNSVG IYAENKEARDNSDVTNSGFINVNKESSAGILAKNAKVTNTGTGTTGGIILTAIKTAGIIG NAGSLVSNTGVIKTQGVTPATDTDGLVGIALSASEGTNESAGKITLGTEYSTGMYGAASS TVTNKGKIEGTKEKIVGMAGDASTVTNKKTINLAGKNSTGLFGKNNSTLLNDTDGKIELA EEESVGIYSDANNALAINKGIIEAVKKSSAGMLGKKGNIENTGTITTSAEESAVMYTENA NATNKKILNANGKKSAGIYVKLTEDSKNIVGKNEGTNAVITTRAEESAGMLGLLDGAITT AGSTLKLMNTASINVNSKKSVGMMVTNDSKNVDKTNVSAENTGTITLSSTTATDNENIGI LANKNSTGINDGTITVKTKESVGMLAQNDGEVTNKKAINIEGESGVGIFVADDTAKGTNA SITGVIKLLAPQSVGIFAKDNGNTYSALNAGTISLENPTGKDYTSLIGMFAQGTTGKKAS VKNTGTINIGTKESVGMYAENKTGNLADVDLHNAGTININSKSSAGIYAPKSTVSKVGTI KLKDTNDSDGSSAVYISEGGKVADTASAVINLGKVNQNRVAYYVNGKNATTKDYSALAGT KIGKVEGYGVGVYLKGKTSNEAKIDGNTPELNYTLDGATGNGIIGLFLDGNTDIANYGKG ITVGNSVGVNTTAPKYAIGIYAKAQGDPTGTAYNIATPIKVGADGVGIYADKDSHINYIG TIEAGDETTAGTGVFITAKEGANAGKVTITGSTIKLKGTGGVGVIASEGTTIDAKYATVE LIGNNIKGVGIYSKKGSTAITTGWNFKNNGNQAEEVRSEEGKVPIAAGLKQLNPRMVLSH VINGETYVAAGGTVRSQNDGSHHIAKENIGLMAEGVKNPTAPAPLTWDEGNFEAVNNGTI DFTIADKSTAIYVNSARAKNNGTINVGKNSTAIYGFYDKDTRKYDGAPAGTDPNKLEVKT TAASKISLGDQSTGMYLINAETVTNDKGSQITSTSGATKNVGIYAINGAVDKETTKETKA YSVPANYKILNMTTATKITLGNGAVGLYSKGKGTTNADRNTVVNTGDITVGDKIVENKGT TNEKNYPAVAMYAENTNLTTTSAVRVGNDGIAFYGKNSNITADGTVNFSNKGVLAYLEKS NFISKLGNLGATQNTMLYLKDSTAKLDGGGNKVDIDVADGYTGAYISGNSQLTGVQKIKL GKDSTGIYLENTSPNFVSTAVSIEGTKDGARGIVAKDANFTNTSKISLSGKESVGIYSNA NSTKKVTNIGELTLSGKKTLGVFLRGGQAFENKANINIADSANSQEPTIGIYTAEGTSNI KHTSGTIEVGEKSIGIYSKTPSNVEMNGGKIHVKDQAIGIYKEGGKLTVNGELDIDKHVA TAKDTEPTGVYAVNGAKVVDQASKITVGEKSYGFILNNTSSTKTNVYTNTNAGPVNLGND SVFLYSNGKANITNNRTINSNNSDHLIGFYVKNGGELLNNGTINFSTGKGNIGIYTPAGT ATNKGKILVGPTDDIDPTTGKPYSDSKKIVYGIGMAADNGGHIINETGGEIRVSDNKSIG MYGAGVGTVVENKGKILLDGSKATATNKIGSLTGVYVDEGATFVNSGIIKTTDSYAGRNG KINDNVTGLVGVAVMNGSTLINEATGKIYIDADNSTGVIIRGKTDANGNLIRRAVIKNYG EIRVRGTGGTAISWKDLTPADIAELERQINANLISTDPKGHELGQASGTDKDYQGVKITV KNGKATFTRNGVAVPDSEVEKINKLIGNQPNLGMSDIGFYVDTLGRTKPVTFDGVTPPVN SQLIIGTEFSKMTNKKEWVVSGNVIKPFLDQIQGRNYKITAMAGSLTWVATPVLDNYGQI VGIAMSKIDYKRTVNPEDNVYNFTDGLEQRYDKNPLGSAEKRLFTKLDGIGKNEDAVLTQ AYDEMMGHQYANTQQRIQATGKILDKEFSYLRNSWSNPSKDSNKVKTFGMSGEYKTDTAG IIDYKNNAYGVAYVHEDETVRLGESTGWYAGIVHNKFKFKDIGNSKEEQLQGKVGIFKSI PFDYNNSLNWTISGDIFAGYNKMHRKFLVVDEVFNAKSKYNTYGVGVKNEVGKEFRLSEG LSVRPYGALKVEYGRVSKIKEKSGEMKLEVKSNDYLSVRPEIGTELAYKLYLGNKALRAA VTIAYENELGRVANGKNKARVAGTSADYFNIRGEKEDRRGNVKTDLNIGVDNQRVGVTGN VGYDTKAKNIRGGLGLRVIF >gi|292606562|gb|ADGG01000048.1| GENE 34 32523 - 33608 1575 361 aa, chain - ## HITS:1 COG:FN1451 KEGG:ns NR:ns ## COG: FN1451 COG0206 # Protein_GI_number: 19704783 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Fusobacterium nucleatum # 1 361 1 360 360 506 85.0 1e-143 MSEEIKDLVKIKVIGVGGGGGNAINDMLYSGVTGVEYIAANTDKQDLEKSLAHRKLQIGE KLTKGQGAGAEPEIGRLAAEEDIEKIQELLKGTDMLFITAGMGGGTGTGAAPVIAKAAKE LDVLTVAVVTRPFNFEGEKRKRNSESGIELLRQNVDSLVIIPNDKLFDLPDKNITMLNAF KEANNILRIGIKAVVDLVLGQGFINLDFADIKSVLKNSGVAVLGYGEGEGENRAIKAAEK ALESPLLEKSIQGADKILINLRTSEDVGLNESQTVTEVIRQATGKKVEDVLFGITMVPEF SDKIEITIMANNFKDEIETNNETFIRMETVKPSEPIREVERKKEVPDDEIDIPPWMRTNR R >gi|292606562|gb|ADGG01000048.1| GENE 35 33630 - 34946 1522 438 aa, chain - ## HITS:1 COG:FN1452 KEGG:ns NR:ns ## COG: FN1452 COG0849 # Protein_GI_number: 19704784 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Fusobacterium nucleatum # 1 438 1 447 447 481 60.0 1e-136 MRDDVIRKVALDIGNDTIKLLIGEMSSDFTKIAVTDYVKIKHNGLRKSDIYDVRALSEGI RTAISKIESIESPITKLSLALGGPRVGSSTVNVRVSFDKEKIIDEADMDKLLRKAKRQIF GENEDKFRILYKEVYNKKVDGPRIIKQPIGMEGKEIQADIHFVYVSEDYVRQFRDVLYGL GVDIDKIYLNSYVSAKGTLDDETRKMGVAHVDIGYGSTSVIILKNSKVLYAKTKSLGELH YISDLSLILKITREEAEEVVLRLKNKTVGPNETIKCGSRKIPLQQIKDIIAARTNDIVQF ITETIDESGFNGVLARGIVLTGGTVDIEGVAEQISSKSGYFVRKMLPIPLKGIKNNFYSD ATVIGIFLEDMEREYKDSIESIKVANIPIPRRDIIKDKKEDSVKEEIDDFLETIDGSRSK EKEKRKKKGIIRWLRELF >gi|292606562|gb|ADGG01000048.1| GENE 36 34943 - 35653 818 236 aa, chain - ## HITS:1 COG:no KEGG:FN1453 NR:ns ## KEGG: FN1453 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 47 236 1 191 191 242 81.0 1e-62 MKVIRLLILNIIMYLVYMLPQNFFRLDYFNINKVNIQESAKMLQPELTKLSEKLYNKNII YIDSNAIKEFLQKDVRVEDVTITKKSLGEISIDVKEKDLSYYAVIGKNIYLVDKVGAIFA YLNEKDVEEVPFIVANSEDEIKEITEFLNEISDLAIFKNISQIYKINDKEFVIILTDGVK IKTNRIEENDEINKEKQNKRYLIAQQLYFNMSKERKIDYIDLRFNDYIIKYLGDNK >gi|292606562|gb|ADGG01000048.1| GENE 37 35667 - 36530 1350 287 aa, chain - ## HITS:1 COG:FN1454 KEGG:ns NR:ns ## COG: FN1454 COG1181 # Protein_GI_number: 19704786 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Fusobacterium nucleatum # 1 287 1 287 287 491 88.0 1e-139 MKIAVFMGGTSSEKEISLRSGEAVLESLQRQGYDAYGVVLDENNQVTAFLENDYDLAYLV LHGGNGENGKIQAVLDILGKKYTGSGVLASALTMDKNKTKQIAENIGIRVPKSYRDLDSI ERFPVIIKPVDEGSSKGLFLCNNKEEAGEALKKLRKPIIEDYIVGEELTVGVLNGKALGV LKIIPQADVLYDYDSKYAKGGSIHEFPAKIEDKSYKEAMKIAEKIHKEFKMKGISRSDFI LSEGKLYFLEVNSSPGMTKTSLIPDLATLQGYTFDDVVRLTVETFLK >gi|292606562|gb|ADGG01000048.1| GENE 38 36546 - 37391 1288 281 aa, chain - ## HITS:1 COG:FN1455 KEGG:ns NR:ns ## COG: FN1455 COG0812 # Protein_GI_number: 19704787 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Fusobacterium nucleatum # 1 281 1 281 281 479 91.0 1e-135 MKIFDNQEMKNYSNMRVGGKAKRLIILESKEEIIDVYKNEENTNIFILGNGTNVLFTDNF MDKTFVCTKKLNKIEDLGSNLVRVETGANLKDLTDFMRDKNYSGIESLFGIPGSIGGLVY MNGGAFGTEIFDKIASIEVFDENHQIREIKKEDLKVAYRKTEIQDKNWLVLSATFKFDDG FDEARVKEIKELRESKHPLDKPSLGSTFKNPEGDFAARLISECGLKGTIIGNAQIAEKHP NFVLNLGGATFEDITNILTLVKKSVFEKFGVKLEEEIIIVK >gi|292606562|gb|ADGG01000048.1| GENE 39 37378 - 38769 1879 463 aa, chain - ## HITS:1 COG:FN1456 KEGG:ns NR:ns ## COG: FN1456 COG0773 # Protein_GI_number: 19704788 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Fusobacterium nucleatum # 1 460 9 468 468 802 88.0 0 MEKIYFIGINGIGMSGLAKIMKCKGYDVKGADICSNYVTEELLSMGITVYNEHDEENVKG ADYVIASTAIKETNPEYAYAKENGIKILKRGELLAKLLNRETGIAIAGTHGKTTTSSMLS AVMLKKDPTIVVGGILPEIKSNARPGKSEYFIAEADESDNSFLFMNPEYSVITNIDADHL DVHGNLDNIKKSFIEFILHTQKESIICMDSKNLMDAISKLPEGKSVTTYSIKDENADIYA KNIRIVDRKTIFEVYVNKELKGEFSLNIPGEHNIQNSLPVIYLALKFGLNKDEIQEALNQ FKGSKRRYDVLYDQELENGYGSKTKRVRIVDDYAHHPTEIKATLKAIKSVDNSRLVAIFQ PHRYSRVHFLLEEFKDAFVDVDKVILLPIYAAGEKNEFNVSSETLKEHINHGNVELMNEW KDIKRYVTRVKKDSTYIFMGAGDISTLAHEIAEELEGMSDENF >gi|292606562|gb|ADGG01000048.1| GENE 40 38774 - 39838 1227 354 aa, chain - ## HITS:1 COG:FN1457 KEGG:ns NR:ns ## COG: FN1457 COG0707 # Protein_GI_number: 19704789 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Fusobacterium nucleatum # 1 354 4 357 357 595 83.0 1e-170 MRKVILTTGGTGGHIYPALAVADRLKLKGVEAVFVGSTERMEHEIVPESGHRFIGLDISV PKGFKNIRKYLKAIRGAYKIIKEEKPDAVIGFGNYISVPTIIAAILLRKKIYLQEQNVNI GSANKLFYKMAKMTFLAFDKTYDDIPIKSQDRFKVTGNPLRRGIEDLRYASERQKLGVGA NEKVLLITGGSLGAQDINNTIMKYWEKICAEKNLRIYWATGNNFTELKKVLKTKKENDRI EPYFNDMLNIMAAADLVVCRAGALTISELIELEKPSIIIPYGSIKVGQYENAKVLKDYNA AYVYTKDELDEAIKKALEVIRNDEKLKKMRIRLKPLRKPNAAEELIAYLDIWRN >gi|292606562|gb|ADGG01000048.1| GENE 41 39848 - 41146 1748 432 aa, chain - ## HITS:1 COG:FN1458 KEGG:ns NR:ns ## COG: FN1458 COG0771 # Protein_GI_number: 19704790 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Fusobacterium nucleatum # 1 432 23 454 454 679 86.0 0 MKKVMIYGMGISGTGAKALLETEGYEVILVDDKKAMTSEEAMQHLDNIEFFIKSPGIPYN DFVKEVQKRGIKVLDEIEVAYNYMVEKNLKTKIIAITGTNGKSTTTAKISDLLNHAGYKA CYAGNIGRSLSEALLHEKDLDFVSLELSSFQLENVENFRPYISMIINMGPDHIERYNSFD EYYDTKFNIAKNQDENQYFIENIDDVEIEKRAKQIKAKRISVSKSKEANVYVEDNKIYVG KDFIIEADKLSLKGIHNLENTLFMVATAEILNIDREKLKEFLMVATPLEHRTELFFNYGD VKFINDSKATNVDSTKFAIQANKDSILICGGYDKGVDLAPLAEMIKENIKEVYLIGVIAD KIETELKKVGYEASKIHKLETVENSLLDMKKRFTKDSDEVILLSPATSSYDQFNSFEHRG KVFKELVLKIFG >gi|292606562|gb|ADGG01000048.1| GENE 42 41146 - 42231 1395 361 aa, chain - ## HITS:1 COG:FN1459 KEGG:ns NR:ns ## COG: FN1459 COG0472 # Protein_GI_number: 19704791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Fusobacterium nucleatum # 1 361 1 361 361 555 89.0 1e-158 MLYFLAEYFAKLEFLRSIYLRTFLAFVISFCIVLFAGKPFIKYLKVKKFGEEIRDDGPSS HFSKKGTPTMGGVLIIASVLLTSLLINDLANKLILLVLVSMLMFAAIGFIDDYRKFTVSK KGLAGKKKLLFQGTIGLMVWAYLYYIGFTGRPMIDFSVINPISAHPYYIGAIGMFILIQL ILMGTSNAVNITDGLDGLAIMPMIICSTILGVVAYFTGHTELSSHLHLFYTVGSGELSVF LAAVTGAGLGFLWYNCYPAQIFMGDTGSLTLGGILGVIGIILKQELLLPILGFIFVLEAL SVILQVGSFKLRGKRIFKMAPIHHHFELMNIPESKVTLRFWIATLIFGIIALGTIKMRGI L >gi|292606562|gb|ADGG01000048.1| GENE 43 42242 - 44071 2343 609 aa, chain - ## HITS:1 COG:FN1461_2 KEGG:ns NR:ns ## COG: FN1461_2 COG0770 # Protein_GI_number: 19704793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Fusobacterium nucleatum # 194 606 1 413 416 677 90.0 0 MNKAIFLDRDGTINVEKDYIYKCEDLVFEEGSVEALKTFKNLGYILIVVSNQSGIARGYF TEEDLKAFNNNMNEKLKEEAVEITEFYCCPHHPDGLAEYKKVCDCRKPNNKMLEDAIERY NIDREKSYMIGDKASDIGAGLKSKLKTVLVKTGYGLKDMEKIDKNETLVCENLKDFSEVL KREKLNELLFEEFSKKVQIKNVVMDSRKVTEGSLFFAINNGNSYVKDVLDKGASLVIADN TDIADERIVKVADTIATMQDLATKYRNKLDIQVIGITGSNGKTSTKDIVYSLLSKKAKTL KTEGNYNNHIGLPYTILNVTDEEKFVVLEMGMSSLGEIRRLGEISNPDYAIITNIGDSHI EFLKTRDNVFKAKTELLEFVNKENTFVCGDDVYLAKLDVNKIGFNEDNNFRIESYEFSDK GSKFTLDGKEYEMSLLGKHNISNTAIAIELAKKIGLSEEEIKEGLKDIKISSMRFQEIRV GEDIYINDAYNASPTSMKAAIDTLNEIYDDKYKIAILGDMLELGEDEVKYHVEVLNYLLD KKIKLIYLYGERMKKAYDIFMKNKSEEYRFWYYPTKEGIVESLKNIRMEKVILLKASRGT ALEDIIVKE >gi|292606562|gb|ADGG01000048.1| GENE 44 44252 - 44923 1057 223 aa, chain - ## HITS:1 COG:FN1305 KEGG:ns NR:ns ## COG: FN1305 COG1917 # Protein_GI_number: 19704640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Fusobacterium nucleatum # 112 223 1 111 111 191 88.0 1e-48 MVKIEVAKAINFNELINSKEAEVVSMRILNETNSYVSLFSLAKNEEITAEAMLGNRYYYC FNGNGEISIENNKKPIKTGDFLEVLANNNYSVKSLDTLKLVEIGEKIGDETMENQTLKML ESASAFSLADCVDYKEGQIVSKNLVAKANLVITVMSFWKGESLDPHKAPGDALVTVLDGE GKYIVDGKAFVVKKGESAVLPANVPHAVEAETQNFKMMLTLVK >gi|292606562|gb|ADGG01000048.1| GENE 45 44939 - 45535 638 198 aa, chain - ## HITS:1 COG:CAC1491 KEGG:ns NR:ns ## COG: CAC1491 COG4185 # Protein_GI_number: 15894770 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 5 189 4 187 187 137 41.0 1e-32 MKKVFYLFAGVNGAGKSTLYNSESLNNDIKNTIRINTDEIVREIGDWRNNSDQLKAAKMA INLRNECFLYGKSFNEETTLTGKTILKTIDRAKELGYELQLFYVGVSSTEIAKERIKSRV EKGGHHIENDIVEKRYYESLKNLKEIILKFDKVYLYDNSKKYKNIFSFSNNKILFKDNKS ISWAKEAIEIIENNIKNK >gi|292606562|gb|ADGG01000048.1| GENE 46 45474 - 45707 225 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783658|ref|ZP_06748982.1| ## NR: gi|294783658|ref|ZP_06748982.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 77 1 77 77 109 100.0 5e-23 MEMKNENLKEMILKLTQKDIDELMEKTEKEEDKIFYNKLFNLILETKQEELIKKGYTNEK SILSFCWCKWCWKVYFI >gi|292606562|gb|ADGG01000048.1| GENE 47 45803 - 45994 153 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291461092|ref|ZP_06026918.2| ## NR: gi|291461092|ref|ZP_06026918.2| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 63 1 63 63 77 100.0 2e-13 MNNTNIENVALKFAILLVLVYNIFRTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIK VAV Prediction of potential genes in microbial genomes Time: Thu May 19 22:28:20 2011 Seq name: gi|292606561|gb|ADGG01000049.1| Fusobacterium sp. 1_1_41FAA cont1.49, whole genome shotgun sequence Length of sequence - 3176 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 5, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 151 94 ## + Term 374 - 423 -0.0 - Term 363 - 409 9.1 2 2 Tu 1 . - CDS 415 - 1188 1095 ## COG0489 ATPases involved in chromosome partitioning + Prom 1264 - 1323 12.2 3 3 Tu 1 . + CDS 1343 - 1726 308 ## COG2832 Uncharacterized protein conserved in bacteria + Term 1835 - 1887 5.8 + Prom 1806 - 1865 7.5 4 4 Tu 1 . + CDS 1904 - 2374 455 ## Lebu_0879 hypothetical protein 5 5 Tu 1 . - CDS 2868 - 3161 346 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606561|gb|ADGG01000049.1| GENE 1 2 - 151 94 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no NLLVLVYNIFRTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIKVAV >gi|292606561|gb|ADGG01000049.1| GENE 2 415 - 1188 1095 257 aa, chain - ## HITS:1 COG:FN2098 KEGG:ns NR:ns ## COG: FN2098 COG0489 # Protein_GI_number: 19705388 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Fusobacterium nucleatum # 1 257 1 257 257 453 93.0 1e-127 MIQKEAPKVKDDKNIKNVIAVMSGKGGVGKSTVTTLLAKELRKKGYSVGVMDADITGPSI PRLMNVSEQKMATDGKNMYPVVTEDGIEIVSINLMIDENEPVVWRGPVIAGAVMQFWNEV VWSDLDYLLIDMPPGTGDVPLTVMKSFNIKGLIMVSIPQDMVSMIVTKAIKMARKMNANV IGLIENMSYITCDCCDNKIYLTDENDIQTFLKENDVELLGELPMTKQIARMTKGESAYPE EIFSKIADRVIEKVKEL >gi|292606561|gb|ADGG01000049.1| GENE 3 1343 - 1726 308 127 aa, chain + ## HITS:1 COG:FN2099 KEGG:ns NR:ns ## COG: FN2099 COG2832 # Protein_GI_number: 19705389 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 124 1 124 125 173 74.0 6e-44 MKNLKKKLYIAFGFLAVTLAILGVFIPGLPTVPFLLVALFCFERSSKKYHDMIMNNKYFG PVLQDYYSGKGLTSSVKIKAISFLSCGMIFSIYKIQNLHARIALAVVWLGVAIHIILLKT KKTKNKK >gi|292606561|gb|ADGG01000049.1| GENE 4 1904 - 2374 455 156 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0879 NR:ns ## KEGG: Lebu_0879 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 155 1 156 159 82 32.0 6e-15 MKKILLFLFLALGVFSFAAPSYVDLNKIQRDGYQIDVNDNESLAFSQEGSEMNLVVTIYF TNDGNPQTLRIAFKTMFAPAFGLEYTDEFQTNRAYIQKSFGENRNGIIYGYNIVPKRQKR KGCFLNVFLITPQELQNKILEEVANTALNEIESYIK >gi|292606561|gb|ADGG01000049.1| GENE 5 2868 - 3161 346 97 aa, chain - ## HITS:1 COG:Ta1471 KEGG:ns NR:ns ## COG: Ta1471 COG0675 # Protein_GI_number: 16082436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma acidophilum # 1 88 107 194 237 106 56.0 1e-23 MLKNHKLAKSISDVSWSEFVRQLEYKANWYGRKIIKIPTFYPSSKTCSSCGNIKETLTLS ERIYHCECCGLEIDRDYNASINILRKGLEILREEKVS Prediction of potential genes in microbial genomes Time: Thu May 19 22:28:28 2011 Seq name: gi|292606560|gb|ADGG01000050.1| Fusobacterium sp. 1_1_41FAA cont1.50, whole genome shotgun sequence Length of sequence - 3242 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1061 828 ## COG0675 Transposase and inactivated derivatives - Prom 1144 - 1203 12.3 + Prom 1426 - 1485 13.5 2 2 Op 1 . + CDS 1512 - 1652 79 ## gi|237739342|ref|ZP_04569823.1| DNA adenine methylase 3 2 Op 2 . + CDS 1699 - 1887 289 ## gi|294783666|ref|ZP_06748990.1| DNA adenine methylase 4 3 Tu 1 . - CDS 1987 - 2178 152 ## gi|291461132|ref|ZP_06027164.2| conserved hypothetical protein - Prom 2247 - 2306 8.8 + Prom 2221 - 2280 8.9 5 4 Tu 1 . + CDS 2308 - 3241 1049 ## Lebu_0003 protein of unknown function DUF1703 Predicted protein(s) >gi|292606560|gb|ADGG01000050.1| GENE 1 2 - 1061 828 353 aa, chain - ## HITS:1 COG:MA0258 KEGG:ns NR:ns ## COG: MA0258 COG0675 # Protein_GI_number: 20089156 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Methanosarcina acetivorans str.C2A # 6 350 3 340 370 221 38.0 2e-57 MKIIKKAYKFRIYPTLEQIIFFSKNFGCVRKVHNLMLDDRKKDYEEYKSTGIKTKYPTPA KYKEEYPYLKEVDSLALANAQLNLEKAFKNFLKNKDFGFPKYKCKSNPVQSYTTNNQNTI YIKDSYIKLPKLKSLVKIRLHRKIEGIIKSVTISKNSLDHYFVSILCEEEIEELQKTNKN IGIDLGIKKFAIMSDCTKVENLKLSKEYEKKLKREQKKLSKRCKLAKDSNKKLSDSKNYQ KQKKKVAKIHNKIRNKRKDFVNKLSTKIINNHDIICIEDLNIKGMLKNHKLAKSISDVSW SEFVRQLEYKANWYGRKIIKIPTFYPSSKTCSSCGNIKETLTLSERIYHCECL >gi|292606560|gb|ADGG01000050.1| GENE 2 1512 - 1652 79 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237739342|ref|ZP_04569823.1| ## NR: gi|237739342|ref|ZP_04569823.1| DNA adenine methylase [Fusobacterium sp. 2_1_31] # 1 46 1 46 308 88 95.0 1e-16 MENFSLFEKEEKNECKPFIKWVGGKGQLIPEISKLYPVELGKTINK >gi|292606560|gb|ADGG01000050.1| GENE 3 1699 - 1887 289 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783666|ref|ZP_06748990.1| ## NR: gi|294783666|ref|ZP_06748990.1| DNA adenine methylase [Fusobacterium sp. 1_1_41FAA] # 1 62 1 62 62 87 100.0 4e-16 MENQYIPMNNEDRKVYYYERRSEYNNLKINIEENNIRKAALFIFLSELLTTNTLRVLESR AS >gi|292606560|gb|ADGG01000050.1| GENE 4 1987 - 2178 152 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291461132|ref|ZP_06027164.2| ## NR: gi|291461132|ref|ZP_06027164.2| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 63 1 63 63 73 93.0 4e-12 MNNTNIENVILKFAILLVLVYNIFKTLATEYMELRLVNSSLVKYSLFCIVVLFKYNIQIK VAV >gi|292606560|gb|ADGG01000050.1| GENE 5 2308 - 3241 1049 311 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 311 3 312 545 347 59.0 3e-94 MKRLAIGLSDFKHLIEEDFYYFDKTKFIEEVIKDGSQVKLFARPRRFGKTLNMSMLKYFF DIKNREENKEIFKDLYIEKTEAFKEQGQYPVIFLSLKDLKALTWEQMEKAIKSVISRLFS EYKYLLNDLDKFDTLTFENILLKNTELEDLKEALKFLTRILYEKYNKKVVVLIDEYDSPL VSAYINGYYEKAKDFFKTFYSTVLKDNSYLQMGVLTGIIRVIKAGIFSDLNNLRTYTILS DVYTDSYGLTEEEVEKSLKDYGIEQEISNVKDWYDGYRFGDSEVYNPWSILNFLDFKELR AYWVDTSGNDL Prediction of potential genes in microbial genomes Time: Thu May 19 22:29:03 2011 Seq name: gi|292606559|gb|ADGG01000051.1| Fusobacterium sp. 1_1_41FAA cont1.51, whole genome shotgun sequence Length of sequence - 63013 bp Number of predicted genes - 59, with homology - 57 Number of transcription units - 23, operones - 15 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 764 844 ## FN2055 hypothetical protein + Prom 782 - 841 7.5 2 2 Op 1 . + CDS 868 - 2316 1948 ## Lebu_1370 zinc finger SWIM domain protein 3 2 Op 2 . + CDS 2330 - 4240 2342 ## Lebu_1369 hypothetical protein 4 2 Op 3 . + CDS 4262 - 4921 646 ## Lebu_1369 hypothetical protein + Prom 4943 - 5002 4.8 5 3 Op 1 . + CDS 5064 - 6164 1518 ## COG0714 MoxR-like ATPases 6 3 Op 2 . + CDS 6178 - 8445 2732 ## Lebu_1367 hypothetical protein 7 3 Op 3 . + CDS 8454 - 9638 1309 ## Lebu_1366 VWA containing CoxE family protein + Term 9641 - 9680 6.0 - Term 9622 - 9673 9.1 8 4 Op 1 . - CDS 9678 - 12842 3094 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 9 4 Op 2 . - CDS 12844 - 15324 2252 ## ACL_1274 site-specific DNA-methyltransferase - Prom 15350 - 15409 13.7 + Prom 15375 - 15434 11.9 10 5 Op 1 . + CDS 15603 - 16061 485 ## gi|294783678|ref|ZP_06749002.1| membrane protein + Prom 16218 - 16277 6.7 11 5 Op 2 . + CDS 16298 - 16693 284 ## gi|294783679|ref|ZP_06749003.1| conserved hypothetical protein + Prom 16716 - 16775 10.3 12 6 Op 1 . + CDS 16797 - 17498 759 ## FN0861 hypothetical protein 13 6 Op 2 . + CDS 17533 - 17952 505 ## gi|294783681|ref|ZP_06749005.1| hypothetical protein HMPREF0400_01675 14 6 Op 3 . + CDS 17985 - 19088 1106 ## gi|294783682|ref|ZP_06749006.1| hypothetical protein HMPREF0400_01676 + Term 19213 - 19250 -1.0 - Term 19073 - 19134 6.0 15 7 Tu 1 . - CDS 19136 - 21019 2178 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 21045 - 21104 12.2 - Term 21381 - 21422 6.6 16 8 Op 1 . - CDS 21428 - 21886 684 ## COG0781 Transcription termination factor 17 8 Op 2 . - CDS 21891 - 22118 320 ## FN1617 prolipoprotein diacylglyceryltransferase 18 8 Op 3 . - CDS 22118 - 22708 701 ## FN1618 hypothetical protein 19 8 Op 4 . - CDS 22727 - 23101 644 ## COG1302 Uncharacterized protein conserved in bacteria - Prom 23171 - 23230 11.4 - Term 23204 - 23251 4.1 20 9 Op 1 1/0.000 - CDS 23269 - 24834 2506 ## COG1418 Predicted HD superfamily hydrolase 21 9 Op 2 1/0.000 - CDS 24856 - 25203 423 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 22 9 Op 3 . - CDS 25205 - 25615 430 ## COG3920 Signal transduction histidine kinase 23 9 Op 4 . - CDS 25621 - 26013 347 ## FN1916 hypothetical protein 24 9 Op 5 1/0.000 - CDS 26060 - 26962 868 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 25 9 Op 6 . - CDS 26955 - 28241 1795 ## COG0536 Predicted GTPase - Prom 28377 - 28436 7.0 26 10 Op 1 . - CDS 28439 - 28900 553 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 27 10 Op 2 . - CDS 28897 - 29667 913 ## COG3177 Uncharacterized conserved protein - Prom 29786 - 29845 12.0 - Term 29829 - 29878 2.2 28 11 Tu 1 . - CDS 29935 - 30267 360 ## gi|294783697|ref|ZP_06749021.1| hypothetical protein HMPREF0400_01691 - Prom 30296 - 30355 8.8 + Prom 30294 - 30353 7.6 29 12 Op 1 1/0.000 + CDS 30374 - 33202 2251 ## COG1061 DNA or RNA helicases of superfamily II + Prom 33213 - 33272 7.1 30 12 Op 2 . + CDS 33294 - 33671 682 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 34241 - 34300 9.6 31 13 Op 1 4/0.000 + CDS 34339 - 36312 2544 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 36325 - 36384 5.5 32 13 Op 2 33/0.000 + CDS 36479 - 37321 1004 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 33 13 Op 3 35/0.000 + CDS 37324 - 38349 1098 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 34 13 Op 4 . + CDS 38346 - 39119 191 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 35 13 Op 5 . + CDS 39131 - 40081 1043 ## FN1967 hypothetical protein 36 13 Op 6 . + CDS 40156 - 40368 417 ## FN1966 hypothetical protein + Term 40377 - 40436 8.6 + Prom 40394 - 40453 12.0 37 14 Op 1 . + CDS 40602 - 41174 724 ## gi|294783706|ref|ZP_06749030.1| conserved hypothetical protein + Prom 41229 - 41288 5.3 38 14 Op 2 . + CDS 41312 - 41599 508 ## FN0038 hypothetical protein + Term 41630 - 41676 5.2 + Prom 41601 - 41660 5.3 39 15 Tu 1 . + CDS 41712 - 41867 231 ## - TRNA 41713 - 41787 72.4 # Gln TTG 0 0 - TRNA 41824 - 41907 68.7 # Leu TAG 0 0 - TRNA 41914 - 41989 94.1 # Lys TTT 0 0 40 16 Tu 1 . + CDS 41983 - 42273 1091 ## - TRNA 41994 - 42069 75.9 # His GTG 0 0 - TRNA 42084 - 42159 93.2 # Gly TCC 0 0 - TRNA 42167 - 42243 82.1 # Pro TGG 0 0 - Term 42323 - 42373 11.5 41 17 Op 1 13/0.000 - CDS 42387 - 44792 3503 ## COG0457 FOG: TPR repeat 42 17 Op 2 1/0.000 - CDS 44814 - 45863 1478 ## COG0457 FOG: TPR repeat - Prom 45893 - 45952 11.6 - Term 45910 - 45962 3.7 43 18 Op 1 4/0.000 - CDS 45979 - 46830 1192 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 46858 - 46917 6.9 44 18 Op 2 2/0.000 - CDS 47039 - 47731 1057 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 45 18 Op 3 . - CDS 47731 - 48909 1753 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 49010 - 49069 13.5 - Term 49016 - 49070 4.2 46 19 Tu 1 . - CDS 49082 - 51496 3552 ## COG0457 FOG: TPR repeat - Prom 51553 - 51612 12.2 + Prom 51674 - 51733 10.9 47 20 Tu 1 . + CDS 51759 - 52613 1050 ## COG0731 Fe-S oxidoreductases + TRNA 52687 - 52762 81.3 # Thr TGT 0 0 + TRNA 52765 - 52839 64.0 # Glu TTC 0 0 + TRNA 52858 - 52942 70.5 # Tyr GTA 0 0 + Prom 52860 - 52919 80.3 48 21 Tu 1 . + CDS 53048 - 54001 1016 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Term 54037 - 54086 1.5 49 22 Op 1 . - CDS 54104 - 54841 210 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 50 22 Op 2 2/0.000 - CDS 54905 - 55270 458 ## COG0524 Sugar kinases, ribokinase family - Prom 55409 - 55468 4.5 51 22 Op 3 8/0.000 - CDS 55471 - 55944 421 ## COG0524 Sugar kinases, ribokinase family 52 22 Op 4 . - CDS 55956 - 56606 898 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 53 22 Op 5 . - CDS 56619 - 58109 1689 ## COG3333 Uncharacterized protein conserved in bacteria 54 22 Op 6 . - CDS 58121 - 58567 206 ## gi|294783718|ref|ZP_06749042.1| conserved hypothetical protein 55 22 Op 7 . - CDS 58598 - 59512 1145 ## COG3181 Uncharacterized protein conserved in bacteria - Prom 59587 - 59646 13.1 + Prom 59564 - 59623 16.8 56 23 Op 1 . + CDS 59743 - 60510 838 ## COG1414 Transcriptional regulator 57 23 Op 2 1/0.000 + CDS 60589 - 61938 1283 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 58 23 Op 3 1/0.000 + CDS 61935 - 62459 623 ## COG1555 DNA uptake protein and related DNA-binding proteins 59 23 Op 4 . + CDS 62459 - 62749 537 ## COG1281 Disulfide bond chaperones of the HSP33 family Predicted protein(s) >gi|292606559|gb|ADGG01000051.1| GENE 1 3 - 764 844 253 aa, chain + ## HITS:1 COG:no KEGG:FN2055 NR:ns ## KEGG: FN2055 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 36 253 1 218 218 329 84.0 5e-89 NFLDFKELRAYWVDTSGNDLIKDVLKNITKNTIEALERLFNGEGLKQNISGTSDLSKLLS EDELWELMLFSGYLTVEEKIDQKNYVLRLPNKEIKELFKDTFLEKYFGRGSKLLYLMEAL TENRIDEYEERLQEILLTSVNYNDTKKGNEAFYHGLIMGMGLYLEGEYITKSNIESGLGR YDFVIEPKNKTKRAYIMEFKSTDNIEKLEEVSKEALEQIENKKYDVSLKQSGIKNITYMG IAFCGKQIKISYK >gi|292606559|gb|ADGG01000051.1| GENE 2 868 - 2316 1948 482 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1370 NR:ns ## KEGG: Lebu_1370 # Name: not_defined # Def: zinc finger SWIM domain protein # Organism: L.buccalis # Pathway: not_defined # 1 482 1 479 479 644 72.0 0 MKKLDKEKILALAPNSSAVANAKKICSSGSFVKLAHSSDDTFYMGECKGSGKSNYIVSAD FVDEENPVMRCTCPSRQFPCKHGLALLFEIADGKTFEECEIPEDILAKREKKEKTKAKKE KESAEGTVKEKKAPSKVSKAARAKKINKQIEGLDLIKNISTQLLKLGLSTIGTVSLKEYK DVVKQLGDYYLPGPQILFQKLILEIQEYKEDQDTVHYQQALECLKRLRAIEKKGREYLKE ELEKENLEMSDNTLYEDLGGVWKLEQLNDLGLKKENAKLLQLAFEVTYDEASKIYTDYGY WIDIESGEISYTANYRPLSALKYIKQDDSNFSLVTVPTLTYYPGGLNKRIRWASANFEEK DKTSFKKIKTYAKNIEEATKIAKNELKNILTDNHVALLLEFEKIMFVEEEGSKKYILVDK NQKMIELRNNGSKELAKVFYELLPNECLENQVMFVKLFQKDRTIYAEAHSIITDDKIVRL GF >gi|292606559|gb|ADGG01000051.1| GENE 3 2330 - 4240 2342 636 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1369 NR:ns ## KEGG: Lebu_1369 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 636 1 638 638 701 62.0 0 MNFEPLYELKNRLENVAVVGINLAKDDFRLKRAVEQLKEYSTAAKVFKQIYDMGNELIST DDEDKCDLFLDLLALLDAVLCTQATTYSGDKPQEINTITKNKDFYKELHYSELSPLVSAF TREGGGRLNIIMDTLESNPEIMKDFRVKACMIHGLSDKYSEIADRMVDELKKQGKDIVPI LKDGFDPQGKRNMVARLEIIASICKEEENDFYKYCIENGSKEVKEDAIGYLSFDQSNIDY LLDLTKTEKGKLKNKAFEALSYMSDNRAAEEWGKFLKKKTLDNLEYLRGTDQQWALDYIN DFIENYVTETKNKTLKTAEERKTVEYDILKVSPFVLKNRNEKSLLFCKELYPFNKYEIKR ILNFYIVKDLDKEVIDTIKELSKEYEGEFLQQEFLISLIKDKAETVYKNFSKYAGAGKER EEIRELFNTFIRGNYSKKKEERKIQEDFRDMFQVILRIHYDEENKEYILEWPDTIVGYPI QIKLDGFDKKWYDIILSTSTEITGNWDYYSSSHRDFRYLYNPNIKGLKEKFGEFYYNITL LRTPYLADIEFLNKLEWKDYKDFLVGKMDIGKNIYLISYRLNYISDFIDKIPISEEDLKA QIEELLEKYKTIQKSTINLCQTWLDKLNSGVKVREL >gi|292606559|gb|ADGG01000051.1| GENE 4 4262 - 4921 646 219 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1369 NR:ns ## KEGG: Lebu_1369 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 189 1 193 638 181 59.0 1e-44 MNFEPLYELKNRLENVAVVGINLAKDDFRLKRAVEHLKEYSTIAKVFKQIYDMGNQLIST NDEDKCDLFLDLVALVDAVLCTQATTYSGNEPQEIKTITKSKDYYKEIHYSELSPLVYAF TEGNLFIIQDAINNNADIFDDFRLKSYMIKGLSNKYSKVINLATKKLKKQRKEIVPLQKN EFSPGVEKKYLLDWILFPVLLKKLKIIFTNIALKIGLKK >gi|292606559|gb|ADGG01000051.1| GENE 5 5064 - 6164 1518 366 aa, chain + ## HITS:1 COG:ECs2927 KEGG:ns NR:ns ## COG: ECs2927 COG0714 # Protein_GI_number: 15832181 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli O157:H7 # 3 356 26 378 384 235 38.0 9e-62 MSKKEEVQRLTAEQLFQEEIDALIKAEKNPIPTGWKMSPKSVLTYICGGKVGKKTIVPKY IGNKRLVEIAISTLVTDRALLLIGEPGTAKSWLSEHLTAAINGNSTRVIQGTAGTTEEQI RYSWNYAMLIAEGPTKEALIPSPIYRAMEDGAIARVEEISRCASEVQDALISLLSEKRLS VPELNLEIPAKKGFSIIATANTRDKGVNEMSAALKRRFNIVVLPSPNSLEAEIDIVRTRV EQLASNLDLNAKLPEDEVIEKVCTVFRELRQGLTLDGKQKIKTTTNVLSTAEAISLLANS MALAGSFGDGEISDYDLAAGLQGAIVKEDSKDGQIWTEYLENIMKKRGSEWLNLYKECKE LNKTSK >gi|292606559|gb|ADGG01000051.1| GENE 6 6178 - 8445 2732 755 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1367 NR:ns ## KEGG: Lebu_1367 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 755 1 759 759 1124 73.0 0 MKKQNENKPHIFGVRHFSPAGAYYVRKYLDEVQPKVVLIEAPSDFTNLIDKITAKEVVPP IAIMAYTLEAPIQTIIYPFAEFSPEYQAILWAKENKVECRFCDLPSSVFLAIQNKGENPS EESLNSYIHRKIDEFSEDSDSEVFWERVMEQAANHQAYRSGARDYGTNLRELTLANTKSD AENIIREAYMCKQVAELCEEGFKINEIAMVVGAFHIEGIEKGNFLSDEEFNLLKKVETKK TLMPYSYYKLSTYSNYGAGNKAPGYYELLWKGLNKEDIYYAVYGYLSRLADFQRTSGNMV SSAQIIEAVQLAISLANIHNSKIPTLKDMQDAAITCMAQGSHSEIILAMANTEVGKKIGK IPQDSIQTSIQSDFYSILKELKLEKYQTLTATELRLDLRENIRVKSEKLAFLDLERSYFF HRLRVLKISFVSFLDKVQDNKTWAEDWVLQWTPEAEIEIVEAILKGDTIEFATAFELNQR IENSSSISMIAEIVKDAFYCGLPKSLEQAFQALQSCMADDIPINEIAKTSTTLSIMLRYG DIRKLDRDVLIPILEQLFLRACLILPTEAFCDANAAIELAEAIIALHNVVENHDFLDRER WYALLTEVAKRDNLNTKISGLAMAILLETGKISNDELGLEVERRLSKAIPADLGASWFEG LSMKNHYTLIARLGLWEKLQDYISALDEDEFKRALVFLRRAFADFSSNEKHDIAENMAEI WGLNKIAVSEAMNKDLKEEEVEIISSLDDFDFDDI >gi|292606559|gb|ADGG01000051.1| GENE 7 8454 - 9638 1309 394 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1366 NR:ns ## KEGG: Lebu_1366 # Name: not_defined # Def: VWA containing CoxE family protein # Organism: L.buccalis # Pathway: not_defined # 1 394 1 392 393 680 84.0 0 MDYKEDIKRWRLILGKDTQDTFSSMNSEAISSLSEEDWLMDRALDAIYNPSGKFMGEAAL GAGRGPSNPQISKWLGDVRDLFDKELVKIIQTDAMDRCGLKQLIFEPEILEQVEPDISLA STIMLLKDQIPKHSKESVRAFIKKIVEEINKLLESDIKRAVRAALNKRQHSPIPSASALD FKRTIQRGIKNYNKELKKIIPEHYYFFERASTNPSSKFTVILDIDQSGSMGESVIYSSVM ACILASMAALKTRIVAFDTNIVDLTEKSDDPVDLLYGFQLGGGTDINKSIAYCMNYIENP KKTIFFLISDLMEGGNRGGMLRHLQEMKDSGVIVVCLLAISGDGQPYYDSQMAGKISSMG IPCFACNPEKLPLLLERVLKGLDLNSFQEEFKKK >gi|292606559|gb|ADGG01000051.1| GENE 8 9678 - 12842 3094 1054 aa, chain - ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 8 1036 9 1032 1050 263 27.0 2e-69 MNEIKRILNFWKELNLLTPISLEGSNFTKEEYLKKNGEKRKKYLSETLKISYFNGKEIRN LLEIVEDKYKNCSIEIGFGNIKNTYLYEKIGIEEDIVDGDGGKSFIFSFMVDSEKKYQEG SFSISKFVYILLKNLLSDDYKNIKEKIDTFNFRMEETLKSYSNQDIESLNNNLQNFTDFL LKELDVDILEKEKVFYFKLFYPNDDDKSSFLQMDFYTEDLENIKQKISEKSFLNNLIYSK LDRKDCYKVDDDVEFIQEITLPKNMPLGRWPSKHNPSLMQAVAINICTSKEYSPNIFSVN GPPGTGKTTLLKEIIADTIVEKANIISKLDLKDIKKVDIKEVKNYNQYSKIPDELKKLGI IVASNNNAAVENISKELPTAKDVFTDETLSGLFDINKRDDVYFTLASDEIFKNKEKDELE KTKTDEKDKKWGLISAPYGKGKNIKKLLEILPNVPEVGKKIDDFKFKLEDIPNLEEAKEK FNAKYEEVIKYRKRLNYYVNQFIKRRELGKNIKVYENNLKNLSEDIEKNLKDIEQKELIL KDVEKEKKNLESSYSIFTKILKLLFGEKNPKILECKRRIVELNKEIISTSKDVTEKSKDR LSLETKINDFNCLKYINEEIIETYLVGDKEEQKNQWIKCLEERFYNDIAHNAESQAICPW GIEEFNKLREELFASSLQLIKAFILNSSEIKQNLKIFKELQDRKSSQKLGYSDKERKEAF KECFHTLNLLIPVLSTTFASVSRVFKDFEENELGMAIIDEAGQATPFSAMGLLYRANRCI IVGDPLQVEPVMTTPLTLIRNRAIKNGINELEKEFKVASNIYRYTSPSLSIQTLADSANL YYGKIGETEVGCPLVVHRRCLSPMFDISNRISYDNRMINKCMSDKKDKKYVLEKNEFIDV RGTEKGNKNHYVEEQGKKVIEIIKNSIKDRNIAIFDDKEFKNLYVISPFTTVINGLKNDI KKAFKDQDEKKVEDWCENCLGTVHKFQGKEADSVILLLGCDKKSENAAQWAAQAANILNV AATRAKKRFAIIGDLELWGELNFFKEAKEILNKE >gi|292606559|gb|ADGG01000051.1| GENE 9 12844 - 15324 2252 826 aa, chain - ## HITS:1 COG:no KEGG:ACL_1274 NR:ns ## KEGG: ACL_1274 # Name: not_defined # Def: site-specific DNA-methyltransferase # Organism: A.laidlawii # Pathway: not_defined # 448 820 217 541 559 107 27.0 3e-21 MKKIDKEYYEKLKAINYNKVETTLYEKLKDYGIWEVKERIEEAEDHLLSYNNRIEYIKKY IKKYIKKYYEDDFTINFNEELEEYEISYGEETLPISVIPIYNKENGEVERIEVSHEKETF FIDIPQEVDHSLYDYYFLPPDPDSYTSLEEYFKKTYNYDEDIMILEKGTYCYEYIEELMI LTAYILLKLQDPTWERGLDLASLKFPENIGLNYIKEPKFKFENRILDLMNRFNEDELLAF ILFAFDFNYYLNKKSEKEKKIIMSPLPNSLSKLSFKLLDIKDNDYVLNFYSELGNFAIES FLNSPSINIRGIEDFFLTRNISILRASLISDNIRFSDITPNYFEEVESEDIEIESCTELF RIKPAFEYSPKQKVDKIFSNLALISNYFFNSLYISEFYQYNKRGKEEVTESYRRNLSRDL EKLIENHKENFNENSKEAIENLEKKLEIIKERTSLEWLFYIKMIEEQLKDEGKALSLVES EILYDYNNNEKIREYFIKKEYIEAIILLPERIMFDINASLALIVFSKGNKKIRFVDASNF GKAKKIKEKKITILRDSDVDEIINLLNNDTNSKVAISKEIKDFSENYYNLGVDINIDPSS IDPSKKTIRGIPLKKLIKNIMRGSQISSEELEEYRATEKTSNIYLSISDINDGLIDFKNI ETYLKNIPENQEKFLVKNEYILLSKYGKSPKLAIVKNLGEEKVIVSGNLIIIEVDKKEID PYYLAALFSSKKGIKILKEAYSNKDKAKAKEKDKEKDKEKDKDKENATLSIKKLKDLRIP IPSREICIEIALKYERILNEINKNKLKLKELIDSKEEILKKLKVEV >gi|292606559|gb|ADGG01000051.1| GENE 10 15603 - 16061 485 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783678|ref|ZP_06749002.1| ## NR: gi|294783678|ref|ZP_06749002.1| membrane protein [Fusobacterium sp. 1_1_41FAA] # 1 152 1 152 152 293 100.0 2e-78 MNCFYHPNTSAVATCRDCGKAICRDCTTEMKDGSLLCPSCLESLGLYQLNWLKKFKKRLI AGGIIGAAFLFLVIKEAGTAGILWGFIIGFFIACLPVSYFVFGETPDLYVPTSLESAGKL ELLKFGLSFITSPIGLIKGLSEYKKIKSCSRI >gi|292606559|gb|ADGG01000051.1| GENE 11 16298 - 16693 284 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783679|ref|ZP_06749003.1| ## NR: gi|294783679|ref|ZP_06749003.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 131 1 131 131 223 100.0 4e-57 MKKILLFCLFLVLSLGAFAQKIKSDGKPHFDKILWELWDVEQDKAYSRRNLIFQVVKIDN DYYLTDSYYPKEWKKKIKTADRSNYQKLKIYKNLYLMDNNGNIYGYDLAKKKPVLIDKDL NILEYFKIYEQ >gi|292606559|gb|ADGG01000051.1| GENE 12 16797 - 17498 759 233 aa, chain + ## HITS:1 COG:no KEGG:FN0861 NR:ns ## KEGG: FN0861 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 83 7 72 73 68 52.0 2e-10 MKKILLFLALSLGVLCFVACGGAKKEPEVVKFIIDKINSDIEAIKNTPAKERRLDVTSLR IREVELAKNIKIEVTDVISSKEFIEIYLKNLEERNNELRQGGMFSKANVLTPPSPEQIEE FKKNKDVVYYKFVISADIVNLEDILKKFHPEMKDIMELGRVHSDILNFLSEENKEKLEYE SVEGYGYFYFNTKTGECSYASDLKGISGETGILGFLSARGHDKYNIWTAQKLK >gi|292606559|gb|ADGG01000051.1| GENE 13 17533 - 17952 505 139 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783681|ref|ZP_06749005.1| ## NR: gi|294783681|ref|ZP_06749005.1| hypothetical protein HMPREF0400_01675 [Fusobacterium sp. 1_1_41FAA] # 1 139 1 139 139 261 100.0 1e-68 MKKLYVFCLFIIFSLGMFAQQLNTDGEPHFDKLVGVKFVKPYYPNGENYDFLLNYTITKK GNDYYLTGKWENPGTSEIENVKSKLKVYKKIFLKSENGDIFAYDIKKNTLALMGAEVAPP PGVDPEFEVFIYFRKGSKK >gi|292606559|gb|ADGG01000051.1| GENE 14 17985 - 19088 1106 367 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783682|ref|ZP_06749006.1| ## NR: gi|294783682|ref|ZP_06749006.1| hypothetical protein HMPREF0400_01676 [Fusobacterium sp. 1_1_41FAA] # 1 367 1 367 367 632 100.0 1e-180 MVTKARELIDITDLEYFVGLERKYFCFETSDDLIRERCEKDFLEASNYSKKKMHEISLTF NKFITFDLEGVIKIRMLIPLEYLREKDGYTYCAIETPEAKEKPFLSKYLNNATLKSIDYN YGRNETTYNDMASVLDEIRKKFPNTLYYGTNIDFTEDFFESFYKKHIEKLVIYLANTHFE EVEVKKYGNSYSILYRDLAAFKNQNPNYNEFDISESIRHIFTKVSLPFEFENLEVDNTRF SETDSLFNYKLSALILEDEVFEDYNISEEGISEDEFDRRFLYMRSVIDFIDDITSIPDEE FTFEMARNMCNYYGVGNKIYERTKALPQMLESTIFLKYFLKHYIALFLFYKNYFIIKKEV EKQKSNM >gi|292606559|gb|ADGG01000051.1| GENE 15 19136 - 21019 2178 627 aa, chain - ## HITS:1 COG:NMB0829 KEGG:ns NR:ns ## COG: NMB0829 COG0286 # Protein_GI_number: 15676726 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Neisseria meningitidis MC58 # 161 439 232 485 514 63 24.0 9e-10 MEDIRIETYKEIEDRDIKIDREYYEKLKTINYSDVETTLEKTLEKYIKESREPIYIGAKD IALLLVILQDPILYKKLLSKEDSNLSYDIKWAKYIIFEEDNGGDFIPYVNPLINKFGKDE LLAFVLFSSNYLDYNDKKVIFEGSTKLYLNLLDIKNNDKILILEDKDLDSSFLIESSFKN SNITIYSNKKSSDIDISLIPEVYNNIELELLTDERGRPKSNFEYLKARVEQKEKLDKILL APSLTFEYSKNDEEKYRNMIQNDFNFQNEILEKTSLEWLFNLLTINHLKDDGRALSVVKI NTLSNPKNKNVRKYFIENGYIESIILLPENILIGSSVSLALIVFSKGNKKIRFVDASNFY TKERRKKGDRLNPTKKILEENNIRDIFKFLNSDDNSEISISKGIEEFSENDYNLDVIENI EVIPEFENSKKIKELIDKKIIKDIIRGSQISLDELKDLRSHEETPYIYLTLSNINDGFIE YENIEDYLKKIPEKQEKFCIKNNVFLISKIGNPPYKFVVAQIPENRKIIASGNFAIIEVN EKKLNPWYLAAFFTTDIGVKVLKKAYIGVNFSSLSIKKLEEIAIPVPSIEEQNRIAQRYI DAITEIKNMKKDLKDKIQAVKEVFFEK >gi|292606559|gb|ADGG01000051.1| GENE 16 21428 - 21886 684 152 aa, chain - ## HITS:1 COG:FN1616 KEGG:ns NR:ns ## COG: FN1616 COG0781 # Protein_GI_number: 19704937 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Fusobacterium nucleatum # 1 152 1 152 153 190 72.0 1e-48 MKEIFGEETKKTKAGIRLVREELFKLVFGVEATESTSEELEKAFDIYLSNNEDFVSTLSE NQLKFLQTSVKGISENYDNIKDTIKTNTQNWAYERIGLVERTLLIIATYEFLKANTPIEV VANETVELAKEYGNEKSYEFVNGILANIGKTK >gi|292606559|gb|ADGG01000051.1| GENE 17 21891 - 22118 320 75 aa, chain - ## HITS:1 COG:no KEGG:FN1617 NR:ns ## KEGG: FN1617 # Name: not_defined # Def: prolipoprotein diacylglyceryltransferase # Organism: F.nucleatum # Pathway: not_defined # 2 75 1 74 74 107 75.0 2e-22 MLPDNILEVLLVKIINNWRKVYGSILGFIVGLTVVNYGILKATVIFAFAFIGYKLGDSSF TKNMKKMIINRLKED >gi|292606559|gb|ADGG01000051.1| GENE 18 22118 - 22708 701 196 aa, chain - ## HITS:1 COG:no KEGG:FN1618 NR:ns ## KEGG: FN1618 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 19 196 1 179 179 200 67.0 3e-50 MFKKIIFFFAWIGIFLISLVALNYILLPGQIVYDNPYVEAVTSFQYKMIILVLAALYLFI CLIKFFSLFERKKDYERKTENGILKISKTTINNYVMDLLRKDPDITGIKTVSELKGNKFL INIKCELLAKMNIANKISYLQNLIKTDLMENLGVDVNKVVVNILKIEAREKEKANDETSN EVPAVNAEGDNVEVSN >gi|292606559|gb|ADGG01000051.1| GENE 19 22727 - 23101 644 124 aa, chain - ## HITS:1 COG:FN1619 KEGG:ns NR:ns ## COG: FN1619 COG1302 # Protein_GI_number: 19704940 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 124 1 122 122 150 83.0 6e-37 MSELGNIRIADEVVKTIAAKAAGDVEGVYKLAGGVVDEVSKMLGKKRPTNGVKVEVGEVE CSIEVYVVIKYGYRIPKVAEDVQKAVLEEVSKLSGLKVVEVNVYIQNIKVEEVTEEETTE VYED >gi|292606559|gb|ADGG01000051.1| GENE 20 23269 - 24834 2506 521 aa, chain - ## HITS:1 COG:FN1913 KEGG:ns NR:ns ## COG: FN1913 COG1418 # Protein_GI_number: 19705218 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Fusobacterium nucleatum # 14 521 1 508 508 739 94.0 0 MNLLIFLGLTILALALVFTVFFKKSVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAEKDAG SKAKEIELKAKEKAYQIKEEVEKEARNLKNEIAQKEARIVKKEEILDGKIEKAENKSLEL EKINNELEAKRKEIDELKVKQEEELSRVSELTKADAREILLRKIREELTHDMAITIREFE TKLDEEKEKISQKILSTAIGKAAADYVADATVSVINLPNDEMKGRIIGREGRNIRTIEAL TGVDVIIDDTPEAVVLSCFDGVKREIARLTIEKLITDGRIHPGKIEEIVNKCRKEVEKEI VAAGEEALIELSIPSMHPEIIKTLGRLKYRTSYGQNVLTHSIEVAKIASTMAAEIGANVE LAKRGGLLHDIGKVLVNEIETSHAIVGGEFVKKFGEKQEVVNAVMAHHNEVEFETVEAIL VQAADAVSASRPGARRETLTAYIKRLENLEEIANSFDGVESSYAIQAGRELRIVINPDKV SDDGATLMSREVAKKIEDTMQYPGQIKVTILRETRAVEYAK >gi|292606559|gb|ADGG01000051.1| GENE 21 24856 - 25203 423 115 aa, chain - ## HITS:1 COG:FN1914 KEGG:ns NR:ns ## COG: FN1914 COG1366 # Protein_GI_number: 19705219 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Fusobacterium nucleatum # 1 115 1 115 115 179 94.0 1e-45 MENNFEILERMKDDIQIIEINGELDAFVAPKLKETFSRLIEKDINKYIVDFKGLIHINSL AMGILRGKLQAVREIGGDIKIVNLNKHIQTIFETIGLDEIFEIYKNEEEALKSFK >gi|292606559|gb|ADGG01000051.1| GENE 22 25205 - 25615 430 136 aa, chain - ## HITS:1 COG:FN1915 KEGG:ns NR:ns ## COG: FN1915 COG3920 # Protein_GI_number: 19705220 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 28 136 1 109 109 168 85.0 3e-42 MNNFDEEINKVKIFIPSFLEGLSTVRAMIRVYLREHNISELDEIQLLSVVDELTTNAVEH AYSDSQGEIEVVLNYYNNTIFLTVEDFGRGFDESLDSKEDGGFGLSIARKLVDVFEIEKK SKGTIIKVEKRIKEAV >gi|292606559|gb|ADGG01000051.1| GENE 23 25621 - 26013 347 130 aa, chain - ## HITS:1 COG:no KEGG:FN1916 NR:ns ## KEGG: FN1916 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 35 129 1 95 96 138 85.0 5e-32 MKKIILLIAMVFLLISCSNNNYVQKGFSQNEKQALILFKDKIKSNLSENNLAYIKENTKD SYRNRYILEKLQNIDFTKLNIFVSQPSYTTEYPSSILALNMNEDTYYFDLIFIYDKQNKK WLIFDLKEKE >gi|292606559|gb|ADGG01000051.1| GENE 24 26060 - 26962 868 300 aa, chain - ## HITS:1 COG:FN1917 KEGG:ns NR:ns ## COG: FN1917 COG0324 # Protein_GI_number: 19705222 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Fusobacterium nucleatum # 1 300 4 303 303 447 84.0 1e-125 MNKAIVIAGPTGVGKTKISIDLAKLLNAEIISSDSAQVYKGLNIGTAKISEKEKQGVEHH LIDILEPIAKYSVGNFEKDVNKILNQNPEKNFMLVGGTGLYINSVTNGLSVLPEADKKTR EYLASLDNQTLLELALKYDEEATKEIHPNNRVRLERVVEVFMLTNQKFSELSKKNIKNNN FSFLKIALERNREELYDRINKRVDIMFEEGLVKEVENLYKIYGEKLYSLNIIGYNELIDY FNGLSSLEEASYKIKLNSRHYAKRQFTWFKADKEYVWFNLSEVSEDEVVKKVDTLFNIKS >gi|292606559|gb|ADGG01000051.1| GENE 25 26955 - 28241 1795 428 aa, chain - ## HITS:1 COG:FN1918 KEGG:ns NR:ns ## COG: FN1918 COG0536 # Protein_GI_number: 19705223 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 428 1 428 428 705 96.0 0 MFIDEVIITVKAGNGGDGSAAFRREKFIQFGGPDGGDGGKGGDVVFVADSNINTLIDFKF KKLFKAQNGENGQKKQMYGKKGEDLIIKVPVGTQVRDFTTGKLILDMNVNGEKRVLLKGG KGGYGNVHFKNSVRKAPKIAEKGGEGAEIKVKLELKLLADVALVGYPSVGKSSFINKVSA ANSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMI YHIVDAAEIEGRDCIEDFEKINEELRKFSEKLANKKQIVIANKMDLIWDMEKFEKFKSYL AEKGIEIYPVSVLLNEGLKEILYKTYDMLSKIEREPLEEEVDITKLLKELKIEKEDFEIT RDEEDAIVVGGRIVDDVLAKYVIGMDDESLITFLHMMRNLGLEEALQEFGVQDGDTVKIA DVEFEYFE >gi|292606559|gb|ADGG01000051.1| GENE 26 28439 - 28900 553 153 aa, chain - ## HITS:1 COG:FN1791_1 KEGG:ns NR:ns ## COG: FN1791_1 COG0494 # Protein_GI_number: 19705096 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 152 1 152 158 246 85.0 1e-65 MITTLCYLEKENKYLMLHRTKKENDINKNKWLGVGGKLEKGETPEQCLIREVKEETGLDL IDYVHRGIVIFNYNEDEPLEMYLYTSKNFSGEIQECSEGDLKWIDKSEIYKLNLWEGDRI FLELLEKDAPFFQLILNYENDNLLSSELKFVEK >gi|292606559|gb|ADGG01000051.1| GENE 27 28897 - 29667 913 256 aa, chain - ## HITS:1 COG:mlr2757 KEGG:ns NR:ns ## COG: mlr2757 COG3177 # Protein_GI_number: 13472455 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 22 237 26 243 263 135 34.0 1e-31 MKKIELYKSFLNSKRPIQKSILSRIENTLRNDFIYNTNAIEGNSLTRQETEVILEYGVTV KGKSLKDHLEVKGQEYAINFLNNIIKENEVLSLRLIKEFHSLILGPVDPEIAGQFKKFKN KIAGSTFETSDPIFVKEDLEKILKDYFSSNENIIEKIAKFHANFEKIHPFSDGNGRTGRL VMNFELMKAGYPICIIKNEDRLEYYNSLNETQANNNYDEIVKFVEENLEKTFEFYFEHIS NNWQEEFEMFCKGGNI >gi|292606559|gb|ADGG01000051.1| GENE 28 29935 - 30267 360 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783697|ref|ZP_06749021.1| ## NR: gi|294783697|ref|ZP_06749021.1| hypothetical protein HMPREF0400_01691 [Fusobacterium sp. 1_1_41FAA] # 1 110 3 112 112 193 100.0 3e-48 MSNNNDDLFGIFGLGIFTLFVGSLSYYVYKKANSEAKIDEAIAERIRNSESIKMLEEGPS ISTNGINLGKKAYSFDKQKYLEELKDLQAKIEASRGAQIEAPNTQEVVEL >gi|292606559|gb|ADGG01000051.1| GENE 29 30374 - 33202 2251 942 aa, chain + ## HITS:1 COG:FN1974_2 KEGG:ns NR:ns ## COG: FN1974_2 COG1061 # Protein_GI_number: 19705270 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Fusobacterium nucleatum # 182 942 1 761 761 1254 93.0 0 MENILLEALKTSSIDFNIDSDEKYQYELIANGEEKIVTRLRKYFEDCDEFVISVAFITMG GISLFLEELKNLENKGIKGKILTGDYLTFTEPKALKKLLSYKNIDLKVATNRKHHTKAYF FRKGNIWTLIVGSSNLTQGALTVNFEWNIKVNSLENGKIVKSVLETFNKEFDNLKTLTEE DIENYQKRYEQLKNLIEANNQNIDLNEIKPNSMQVQALKNLEETRTENDRALLISATGTG KTYLSAFDVKQAKAKKILFVAHRKVILERSKISYQRILKNKKLEIFDSNFQINDKDEVVF AMVQTLNKEKNLNIFPKDYFDYIIIDEVHHGGAKTYQSIFEYFKPKFLLGITATPERTDD FNIYQLFNYNVAYEIRLQDAMKEELLCPFHYFGISDIVIDGESIDEKTSIKNLTSDERVR HILEKSKYYSYSGEKLHCLVFVSKVEEAKILVEKFLEQGVKALALSSENSDNEREEAIRK LEEGEIEYIISVDIFNEGVDIPCVNQVILLRPTTSAIVYIQQLGRGLRKHKNKAYTVVLD FIGNYEKNFLIPIAISQNNSYDKDFMKRFLMNATDFLAGESSISFDEISKERIFENINKV NFSNRKLIEEDFKLLESQLGRIPYLYDFYIKNMLSPTVILKYKKDYDEVLKNIAPKYRAG SLNSIEKKFLIFLSTFFTPAKRVHEMLILKELFVKEKLNIGDIESILKDKYSLINQKNNI KNAFEHLSKEIFITLSTTKTFEPVLYRKENYYFLDENFKNSYSSNSYFKILIDDLIKYNL AFAENNYNNFAKESIKLFGEYTKQEAFWYLNLNFNNGFQVSGYTPFENERKLLIFITMDN LSERADYSNEFYDSQTFSWFSKSSRYLKKDNKVTIEGKIAENFYEINVFVKKNNGENFYY LGDVEKVLSAKEIKDSQGKSMVKYIFKLKKDVKKELLDYFNM >gi|292606559|gb|ADGG01000051.1| GENE 30 33294 - 33671 682 125 aa, chain + ## HITS:1 COG:FN1973 KEGG:ns NR:ns ## COG: FN1973 COG0251 # Protein_GI_number: 19705269 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Fusobacterium nucleatum # 1 125 4 128 128 224 98.0 3e-59 MKRVINTTNAPAALGPYSQAIEANGVLYVSGQIPFVPATMTLVSEDVEEQTKQSLENIGA ILKEAGYDFKDVVSATVYIKDMNDFTKINGVYDKYLGEVKPARACVEVARLPKDVKVEIG VIAVK >gi|292606559|gb|ADGG01000051.1| GENE 31 34339 - 36312 2544 657 aa, chain + ## HITS:1 COG:FN1971 KEGG:ns NR:ns ## COG: FN1971 COG1629 # Protein_GI_number: 19705267 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 1 657 1 657 657 1134 89.0 0 MKKKFILLALIVLGSVSAFAEETPVLELKQTVVTSDSFGTSVRETTKNMTVVNAKEIKEK GAKTIADALRGVPGVVVREMDGSSPTIDLRGSGATAQFNTVILLDGIPVSGLAGFNLNSV PVEEISKIEVLQGAGAVMYGDGSIGGVVNIITKAPTNKTVYGGAGLEVGSWRTIRENVHL GGKVGDKLLLNASYSGSTSKDYRDRSPQYENKKDKTDSLWLRGKYLLDNGSIAINYNHSE DKDYYTGSLSKEQFDKNPRQVGSWSGYTYGINDIVNAKYNQKINDRIDIFLTAGYYHNKD KFQNNSTSEYFLRPEVKYTYAKDSYVTLGLDYRDGKRDFKDDVFVNGVSQKAPDDKRESF AGYITNKSTFGKWQFTQGYRREKVKYEYSSKVYNPMTWQLSEIKPQSADYASNDSFEFGV NYLYSDTGNVFFNYTRALRTPTIQDAGAWYGPVKTQKNDIFEIGLRDAYKNTSVATSVFY INSKNEIYYDKTNPFSSNNQNFDGKVRRIGAQLSMAHYFDNLTLRERVSYIVPKVTSGTY DGKEFAGVSRWTVNAGATYKFTKGLTANVDAYYQSNAYAEDDFDNYFSKGNNYITVDANL SYAFENGIELYTGVNNLFDKKYADAVTSTRSSWGAGPRKVYSPANGRSVYAGIKYTF >gi|292606559|gb|ADGG01000051.1| GENE 32 36479 - 37321 1004 280 aa, chain + ## HITS:1 COG:FN1970 KEGG:ns NR:ns ## COG: FN1970 COG0614 # Protein_GI_number: 19705266 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 280 1 280 280 405 81.0 1e-113 MLFSFTIVNAKGAQAKKYNRIVSLTLNGDEMLFGLVSENRIAGLSGKINEDKEISNIVDK AKKFPKVESSEEVLISLEPDLIIVADWLSKKTGYLSELTGAKVYILKTANSYEEQKKSIK DLANLVEEKENGEKIITNMDNRLKALQNKIAKKYKGPKPRILMYTTFGSTSGKNTTFDDI VRLINGINVISEAGINKYQDISKEKIIELNPDIIIVPIAKKYDNVAKVSKLFFEDPSLKN VKAVKNKKVYFVQYKDISATSQYMIDNIENLAKVVYQFKE >gi|292606559|gb|ADGG01000051.1| GENE 33 37324 - 38349 1098 341 aa, chain + ## HITS:1 COG:FN1969 KEGG:ns NR:ns ## COG: FN1969 COG0609 # Protein_GI_number: 19705265 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 1 341 1 341 341 509 95.0 1e-144 MKYRINFNLFLFFLLIGIIIFSLFYGAVRVPISDVIKILLNKTGLFNLEITKKSYVPIVF FVRFPRIMVAVIVGGALALCGCTMQSLLKNPIVDSGIIGISSGASLGAVIAISLGFTATN IFAMPLFSGAFALIISAIIYKISTLRGRTDNLLLILSGIAIGSFVGAITSVILTSLAETE MKEYIFWAMGSLNGRRWEHFLFGLIPIAILSPILFYYGKELNILLLGEEEAKSLGINIKK IRAKILIIIALLTAISVCISGNITFVGLIVPHILRKIIGSDNRKLLKSSFLAGACFLTFS DLLSRIVLAPKEISVGIVTALIGAPYFIYLIVKIRREGKTL >gi|292606559|gb|ADGG01000051.1| GENE 34 38346 - 39119 191 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 218 1 219 223 78 26 1e-13 MKNVLEVKNISYSVGENKILKDISFKCQSGEIIGIIGPNGSGKTTLLKSINGINSISSGD ISFNNKSLKEYSEKELARDISFMNQNTNIEFDFPCIDIVVLGRYPYLERFQEYSKKDIEL AEKYMELTDTLKFRDKSILQLSGGERQRVLFAKILTQESQVILLDEPTASLDMRHEEDLL KEVSKERAKDKIVILVIHNLRTAIKYCSRLILLSNGNIVKDGSVEEVITEENLNNVFGIK TKVYYNEISKSLDFCII >gi|292606559|gb|ADGG01000051.1| GENE 35 39131 - 40081 1043 316 aa, chain + ## HITS:1 COG:no KEGG:FN1967 NR:ns ## KEGG: FN1967 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 316 1 316 316 501 89.0 1e-140 MYKLLNMADFCSNEELEKDMQYLSQKYGFDGFELIKFFDGDNSSLKEYIKGYHMRFFPSW MELYLEDFTSLYGELKDDKYFKSLCGGHSKKELIEYYKKELERAKELEVEYVVFHACNVK VTEAMTYDFKYSDNEVLNAVISIINEIFEDGEYNFTLLFENLWWSGLKLTNKEEIEYLLN GVKYKNVGFILDTGHMINNNRDIKNSKEGIEYIKKNLENIGEYKNLIYGMHLNYSLSGEY VNRAIKENREKNLDIEEIMSNVYQHVGSIDYHDPFEDKEILDIIRSLPLKYLVFELIGNT QEELEEKIQRQCKIFS >gi|292606559|gb|ADGG01000051.1| GENE 36 40156 - 40368 417 70 aa, chain + ## HITS:1 COG:no KEGG:FN1966 NR:ns ## KEGG: FN1966 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 70 1 70 70 87 84.0 2e-16 MNRDAKFINFSEEHELDYILKKYGKETTKENRDLLKEFGKQAKELLGKTMLGHQDLYKYI EDNSLAEKLK >gi|292606559|gb|ADGG01000051.1| GENE 37 40602 - 41174 724 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783706|ref|ZP_06749030.1| ## NR: gi|294783706|ref|ZP_06749030.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 190 1 190 190 299 100.0 7e-80 MKKFLRVFLFSLMLVAGLIFVSCGKKELTGLHKEFDIIFNGIKEEVTTEFKNNLDALEKE VKDSSRSELETKIQLFGIEVLVEAFNKASYDVVSINDMGDKVELKIKVKAVDFFEALQQI ITNTTKDKSNLVDEVEGLLKKIKKGKAPVIEQEMDIEMIKENDTWTIPERQKYVLMKRMM GIEKGTIFDN >gi|292606559|gb|ADGG01000051.1| GENE 38 41312 - 41599 508 95 aa, chain + ## HITS:1 COG:no KEGG:FN0038 NR:ns ## KEGG: FN0038 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 95 6 100 100 102 78.0 4e-21 MNQNEKKEIMGKFAKKLENAIKREVAVTKEIENDKALIKYLEAKKAAGAALDTTAYESYD AWIDTIKKQIKKSESTLTNIEFKKVELEAVNQYLA >gi|292606559|gb|ADGG01000051.1| GENE 39 41712 - 41867 231 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGVAGFEPTHNGVKVRCLTAWRHPNRIKKSLKASIYMVRRERLELSRLGH >gi|292606559|gb|ADGG01000051.1| GENE 40 41983 - 42273 1091 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQNGVTDGDRTRDNQCHKLALYQLNYGHHYKFFGAGNEVRTRDIQLGRLTLYQLSYSRT SMVGIARFELAAPCSQGRCATGLRYIPTYVFDTSLL >gi|292606559|gb|ADGG01000051.1| GENE 41 42387 - 44792 3503 801 aa, chain - ## HITS:1 COG:FN1964 KEGG:ns NR:ns ## COG: FN1964 COG0457 # Protein_GI_number: 19705260 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 93 799 2 705 709 768 60.0 0 MKETLLEEIERLHDLEKYQEIIDLIEALPAERLNTELMGELGRAYNNIENYAKGLELLKT IEFEEGNSFQWNRRAGYSYFFLEDFVNAEKCFLKAYELDPNDKDNSYFLIGIYTSLSRIE DENSNSEKAIEYALEAKKYAFNEETELRTNSFLAWMYDRHMEYTKAEEIIRNILGRNKDD AWACAELGYCLAGQERYEEALEYFFMAEKLNKKEIWIYKKMVTCYKHLNEKEEALKYCFK VLELDAEDRDILTDLAWLYDTTARYEEGLKYLERLEEFGQDDAWTNTEFGYCLSKLGRYE EAIERLNRALEADDDEDKDVAFIYARLGWCKRKLNMYEEAIEDFNQAKKWGGNLAIINTE IGHCYKAKDEHKNALKFYLEAEKFDKKDFNIMSEIAWHYGALEEPEKAINYIKKAMRLGR NDVWINVQYGSCLADLEKYEEAIEKFEYALSLDEEKEETELAFVYGQLGWCNRHLWNFEK ALEYFMLSKEKGRNDVWVNVEMALCYENLEEPEKALECALIAYELDKDDVHVLSELGVIY SCMEKYEEALSFLLRAEELDRDDEWINTEIGINLGRSGKINEALERLKKSLTMVEEDDID RRIIINSEIAWFYGKLEEVEPEVVLEYLNVARALGRDDEWIHSEMGYQLGYNPETRKEAL EHFERAMELGRDDAWIFEVTGAVLLNFDRYEEALDYFRKAYAKDEDGWYLYSMGECLRKL ERYEEAIEVLLESRQISIDEDDVVDGEDLELAHSYLGIGDKDNAQKYLNSARVSLIEQGT LNDEIKEEIEEIEKGILSLDN >gi|292606559|gb|ADGG01000051.1| GENE 42 44814 - 45863 1478 349 aa, chain - ## HITS:1 COG:FN1965 KEGG:ns NR:ns ## COG: FN1965 COG0457 # Protein_GI_number: 19705261 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 349 1 345 345 422 68.0 1e-118 MDQKFWDKIDSFGQNGEYDKIVREIKKLPADKMDMELINVLGRAYMYLGDLGNALDTYLS FIGKAEEDTLNADIWLYSEAGWTCNEFEDFEQGLKYLLEAEKLGRDDEWLNTEIGQCLGR LERYEEAIKRLEKSLKLIEADEAENGDERVNEKIFIYSELGYLYSVKEKNEEALKYFYIA KDLGRNDDWIYLHLYQNLKTTKGEEGALKYFEEQAKIDDKNPVLLEALGNIYMLEPENYE KAEKTFQKAFALSGDGEQLYNRGRALAALKKYEEAIEVLLQSRRISEQEGDVTDGEDVEL VRCYIGLKDKKNAEKYLELAREDADNVADEFIDEYEEELDQLEDMIDEL >gi|292606559|gb|ADGG01000051.1| GENE 43 45979 - 46830 1192 283 aa, chain - ## HITS:1 COG:FN0130 KEGG:ns NR:ns ## COG: FN0130 COG1136 # Protein_GI_number: 19703475 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Fusobacterium nucleatum # 16 283 1 268 268 482 98.0 1e-136 MSIDNNELDEMDFDLLDILGVTEQKVESITLLPGYNKKGEKEGYEELVIKSGEIVAIVGP TGSGKSRLLADIEWGAQGDTPTKRTVLVNGELMDAKKRFSPSYKLVAQLSQNMNFVMDLT VREFIDLHAESRLVLDRESVIEKIFNQANELAGEKFTIDTPITSLSGGQSRALMISDTAI LSTSPIVLIDEIENAGIDRKKALDLLVGNNKIVLMATHDPILALMGDRRIVIKNGGINKV IESTTEEKNILGALTELDDVVQGMRNKLRYGERLELDFEIKKK >gi|292606559|gb|ADGG01000051.1| GENE 44 47039 - 47731 1057 230 aa, chain - ## HITS:1 COG:FN0129 KEGG:ns NR:ns ## COG: FN0129 COG0378 # Protein_GI_number: 19703474 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Fusobacterium nucleatum # 1 230 1 230 231 446 96.0 1e-125 MKLITVSGPPSSGKTSLIIKTIESLKAQNIKVGIVKFDCLYTDDDVLYEKAGILVKKGLS GSVCPDHFFASNIEEVVQWGQANGVDLLITESAGLCNRCSPYLKDIKAVCVIDNLSGINT PKKIGPMLKLADIVVITKGDIVSQAEREVFASRVQTVNPKAAIIHINGLTGQGTYEFGSL IMDDNEEIDTVLERKLRFPLPSAVCSYCLGETRIGNEYQLGNIRKINFEE >gi|292606559|gb|ADGG01000051.1| GENE 45 47731 - 48909 1753 392 aa, chain - ## HITS:1 COG:FN0128 KEGG:ns NR:ns ## COG: FN0128 COG1840 # Protein_GI_number: 19703473 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 79 392 1 314 314 606 96.0 1e-173 MYISKSMSIKSIVEKYPETIPVFTNIGFKGLDNPAVLQKLEEQGITLEKAMMIKKEDVDA FIPMLQQAIASVEREDEGVKEASLMGLLPCPVRIPLLEGFEKYLADNKDIKVKYELKAAY SGLGWIKDEVIDKNDIDKLADMFISAGFDLFFDKDLMGKFKEQGIFKDMTGIEKYNTDFD NENIHLKDPHGDYSMIGVVPAIFIVNKAALDGREVPRSWEDLLKPEFAKSVSLPIADFDL FNSILIHIYKLYGFEGVKSLGHSLLSNLHPAQMVEAKEPVVTIMPYFFSKMIPAKGPKEV IWPKEGAIISPIFMLTKASKAKELEKVIKFMSGKAVGDTLANQGLFPSVHPEVKNPVNGR PMLWVGWDFIYSNDMGELIKKCEETFKEGAAE >gi|292606559|gb|ADGG01000051.1| GENE 46 49082 - 51496 3552 804 aa, chain - ## HITS:1 COG:FN1964 KEGG:ns NR:ns ## COG: FN1964 COG0457 # Protein_GI_number: 19705260 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 93 799 2 705 709 822 64.0 0 MKQEILEKIERLHDLEKYQEIIDLIEALPAEQLNTDLIGQLARAYNNVENYEKGLEILKT IEFEEGHSFLWNWRAGYSYFFLEDYTNAEKCFLKAYKLDSSDDATCDFLIATYTKLAKLE VKNENSEKAIEYALEAKKYVYDEEGTVETDSFLAWLYDRYEEYTKAEEILRNQLAKNKDD EWTLAELGYCLSEQEKYEEALEYFFAVEKINKEDVWTYRKIGMCYKNLDNKEEALKYYLK AVELDEEDKYSLSDIAWLYDSFGKYEEALKYLERLDELGEENDAWTNTEFGFCLSRLKRY EEAIERINRALEVEDEGKDIAYIYSQLGFCKRNLKEYDEAIEAFKQAKKWGRNDAWINVE MGYCHKGKNETKEALECYLQAEKFDKKDPYLMSDIAWHYDVLGQYNEGLKYIKKAIKLGR NDVWINVEYGSCLGGLYKYEEAIEKFEYALGLEVEDEDERDLAFIYSQLGWCHRQLGNYE KGLEYHLKSKEEGRNDPWINVEIAMCYENLGDYEKGLEYALIAYELDREDIRSLSEVGWI YDCMEKYEDGLPFLLRAEELGRDDEWLNTEIAMNLGRSGKTNEALERLKKSLTMVDEDNI SQKIFINSEIAWLYSLEENQPEEALKYLNVAKDLGRDDEWLHSQIGYQLGYDPEKTEEAL EHFEKAIELGRADAWIFEVKGIMLLDLKRYEEALESFKKAYAEDNNGWYLYSMGRCLRGL ERYEEAIKILLESRQISLDEEDVVDGEDFELAYCYIGIGDKENAQKYLDSARDSITERGL LNDYFKEKIEEIEKGISSLDILFN >gi|292606559|gb|ADGG01000051.1| GENE 47 51759 - 52613 1050 284 aa, chain + ## HITS:1 COG:FN0127 KEGG:ns NR:ns ## COG: FN0127 COG0731 # Protein_GI_number: 19703472 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 284 1 284 284 439 86.0 1e-123 MYKHVFGPVPSRRLGISLGVDLVVSKSCNLNCIFCECGATKKIQLERKRFKDMNEILEEI STVLKDIQPDYITFSGSGEPTLSLDLGNISKAIKEDLKYQGKICLITNSLLLADENLMEE LEYIDLIVPTLNTLTQDIFEKIVRPDYRTSVEEIRKGFINLNKSKYKGKIWIEIFILENI NDSDKNFVDIANFLKSENIRYDKIQLNTIDRVGAERDLKAISFEKISRAKKILEENGLNN IEIIKSLGELEEDKKIQVNQELLDNMKQKRLYQEEEINKIFKKN >gi|292606559|gb|ADGG01000051.1| GENE 48 53048 - 54001 1016 317 aa, chain + ## HITS:1 COG:FN1613 KEGG:ns NR:ns ## COG: FN1613 COG2805 # Protein_GI_number: 19704934 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Fusobacterium nucleatum # 1 317 3 316 316 442 80.0 1e-124 MEKIFEYARKNNISDIHIIEGERIYFRKDGEIVAYENSQSLSREDILKICSGKFEEDFAY TDSKNQRYRINSFFTKGKLALVIRVINDEAAKLKGEFINKVIDEKILALKDGLVLISGIT GSGKSTTLANIIEKFNENKSIKILTIEDSIEYIFENKKALIIQRELGTDVESFEKALKSS LRQDPDVIVLGEIRDEESLFSALKLAETGHLVFSTLHTMNAVESINRLISMAKSDKRDFI REQLASVLRFIFSQELYRDKKTKKVKAIFEILNNTKAVANLIANNKLNQIPSLIESGIEN YMITKEKYFKKIEIESD >gi|292606559|gb|ADGG01000051.1| GENE 49 54104 - 54841 210 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 240 2 238 242 85 27 7e-16 KKKIAFVTGGNTGLGEAYVVAFAKAGADLFIVTYDNNWEETKKLVENEGGRAYFYQANLT DREQIRKSVIECVKIYGRIDILVNNAGTIRRAPLLEYKDNDWKDVLDINLNAVYYLSQDV AKIMEKQGSGKIINIASMLSFQGGKFVPAYTASKHAVAGITKSFANELASKNIQVNAIAP GYVKTLNTAPIRADEKRNKEILDRIPANRWAEPFDLMGSIIFLASKASDYVNGHILVVDG GWLIR >gi|292606559|gb|ADGG01000051.1| GENE 50 54905 - 55270 458 121 aa, chain - ## HITS:1 COG:CC1496 KEGG:ns NR:ns ## COG: CC1496 COG0524 # Protein_GI_number: 16125743 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Caulobacter vibrioides # 14 99 267 350 368 60 31.0 6e-10 MRDFAKIYELSLISSTRREVNSTTSHNFSSIIYEKKNDKFYNEDAYKNIEVIDRIGSGDA YVAGVLYGILQENSAEIALKYGNASAALKNTISGDTTCINLTLLKEIIDEHEHGNSSEMS R >gi|292606559|gb|ADGG01000051.1| GENE 51 55471 - 55944 421 157 aa, chain - ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 14 156 3 143 339 84 34.0 9e-17 MSKLFDFLEKEFSLVCAGEMIMRLSPLNNELLIQGNSLTKQMGGAEYNVASLVSLLGEQV AILTKLPNNTIGEFAHKSVIANKISDKYLIFDDSLNKRMAIYYYEYGASPRKPRVTYDRL NSSFQSLKLNEIPEGVFSSTKIFHVSGITLGLSKKIK >gi|292606559|gb|ADGG01000051.1| GENE 52 55956 - 56606 898 216 aa, chain - ## HITS:1 COG:SP0317 KEGG:ns NR:ns ## COG: SP0317 COG0800 # Protein_GI_number: 15900249 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 7 206 1 206 209 189 49.0 2e-48 MEVLSVLKKYQTLNKILDTAVVAVIRGESIEEGKRVIKACLKGGIKAIEVTYSLPNASEI IKELKNENLKGVIIGAGTVLDETTARLAILSGADFIVSPDFDKNTAQICNLYQIPYIPGC MTVTEITTALKYGVDIIKLFPANNFESNFIKSLKAPLPNINFMATGGISLDNVESWFKNG ASVVGAGGKLASGSDDEIIATAQGFIKKISELKNTL >gi|292606559|gb|ADGG01000051.1| GENE 53 56619 - 58109 1689 496 aa, chain - ## HITS:1 COG:BH2009 KEGG:ns NR:ns ## COG: BH2009 COG3333 # Protein_GI_number: 15614572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 467 1 466 504 390 45.0 1e-108 MGQYLLNGLMTALHLSNFLYLCVGVTGGIVIGALPGLTATMGVAILLPFTFGMEPVTGLI MLVGIYIGAIYGGSISAILLNTPGTPASAATCIDGYPLVKKGMAAKALSVSTIASAIGGL ISCVALVTISPILAKFALKFSSPEYFALALFGLTIIASISSGNFLKGILAGVIGLLISTV GMDAITSFPRFTFDNVDLLNGFSVIPVLIGLFAVSEVLVQIEEVITEKEVNVETVKNKNY MNLKELKHCMPTILKSGILGTLIGAIPGAGADISAFICYNEAKRANKNEKFGEGSLIGVA APESGNNGVTGGALVPLLTLGVPGDAVAAVLLGALIIQGLTPGPLLFEQNPDIVYGLFSA MIIGNILLLIIGLAGIKFYSKIVDIPKKFMIPCILVLSTIGSYSMNNSVFDIFITLTFGV VGYIMTKINIPISPIVLSVILGPMLETNLRKSVIMYEGSYSFLYTRPITIFFLLLTFISV YSSIHKYLKKDKTQNI >gi|292606559|gb|ADGG01000051.1| GENE 54 58121 - 58567 206 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783718|ref|ZP_06749042.1| ## NR: gi|294783718|ref|ZP_06749042.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 148 1 148 148 154 100.0 1e-36 MLERLFLLFLCIISAFLYFITFNFEVFEMDKYSLGPAFFPRLICIILFLIALILLIFSIK NKNYSKIKNKNPNLKYSVITIIFFIVYVFLIEKLGYLTSTIIFMISIIFLLKSKSLLINI IFSVVFSSVIYLLFSKGFNVSLPEGIFI >gi|292606559|gb|ADGG01000051.1| GENE 55 58598 - 59512 1145 304 aa, chain - ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 21 299 16 298 308 181 36.0 1e-45 MKKIILLLGLIFSLVTFGKDYPSKNINLVVPFSAGGGTDAVARKLASIMEKDLGKPVVII NKTGGAGAVGMTFGAKAKKDGYTVTMITREIISLPIMKLSPVTYKDFELVSLVNLDPAVL LVEKDSKYKTFDDLINDAKKNPEKIKFASTAKPNFYVLAIEKEIGVKFNHIPYNGAGEVV PALLGKHADFTLVGPGEAMGQIKSGQFRVLGVMSDNRLESLKDVKTLKEMGYNITSGTWR GIAVPKGTPKEVIDTLNASIKKAVESKDFIDFMNKANYGIKYLSPKEFENFIINDSKTIE KILK >gi|292606559|gb|ADGG01000051.1| GENE 56 59743 - 60510 838 255 aa, chain + ## HITS:1 COG:BH2137 KEGG:ns NR:ns ## COG: BH2137 COG1414 # Protein_GI_number: 15614700 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 7 246 2 246 251 88 27.0 1e-17 MELVPALEKMDKILIYIYFNREVSQVEIVKNLNISRATAFRILHTLVELNYLSITNKKYS LGDKFYLFLKNDIKDNFVLLKEVTYPYLEKLSLKFKETFKLSILDNDKVRTLCLVESSDL NKVSFSDKAIYPIHAGAASKLLICQLPEYKLKLLIDNGLPKYTKNTITDPEVLRKELNKI RYSRISFDNMEHSENIKAVAIPILDKNNRIVAAISCPCFSEKLNEERENEIAKEMKKYAE KIREKLYLAEDNLRK >gi|292606559|gb|ADGG01000051.1| GENE 57 60589 - 61938 1283 449 aa, chain + ## HITS:1 COG:FN1612 KEGG:ns NR:ns ## COG: FN1612 COG0635 # Protein_GI_number: 19704933 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 449 21 469 469 753 92.0 0 MASELLEDKILFDIQREENLIKIKVSSENLNKNTEFSYMDLENKIEDQILTMCKISLLKL LNKNYAWGSLMGVRPTKVLRRLLINGCDYKEARKILKDFYLVTDDKINLMETVVKKELEL LDKEHINLYLGIPFCPTKCKYCSFASYEIGGGVGRFYNDFVEALLKEIQIIGNFLKTYNK KVSSIYFGGGTPSTLTEIDLERVLKKLLENIDMSDVKEFTFEAGREDSLNIKKLEIMKKY SVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKNLGFIINMDLIMGLPEETTEEIL DTLAQLNAYDIDNLTIHCLAFKRASKLFKESQERNSIDRALIEEHIQEIVKNKEMKPYYM YRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIEERNGIDYIERY VNPKDPALYIRELDKRCKEKIEMFRKEKI >gi|292606559|gb|ADGG01000051.1| GENE 58 61935 - 62459 623 174 aa, chain + ## HITS:1 COG:FN1611 KEGG:ns NR:ns ## COG: FN1611 COG1555 # Protein_GI_number: 19704932 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Fusobacterium nucleatum # 18 174 2 158 159 211 78.0 7e-55 MKKIIGFLIFSCLFANSYAVPALNNNDYRLIMSSQNMQNEKEELLDINKASEQDMLGRKI SKSYVSKIMEYREITGGFDKLEDLKRIKGIGDATYQKLSKFLKVGSAPTKKVLNINLADE LTLKYYGFSKKEIKKIQTYLDKNDRITDNIEFQKLVNKKTYEELKDLINYGGKK >gi|292606559|gb|ADGG01000051.1| GENE 59 62459 - 62749 537 96 aa, chain + ## HITS:1 COG:FN1610 KEGG:ns NR:ns ## COG: FN1610 COG1281 # Protein_GI_number: 19704931 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Fusobacterium nucleatum # 1 96 1 96 285 176 90.0 1e-44 MGRLIRGLSKNARFFVADTTDVVQKALDIHKYDEYSMKTFGKFCTLAAIMGATLKGEDKL TIRTDTDGYIKNIVVNSDANGDIKGYLINTSEENFD Prediction of potential genes in microbial genomes Time: Thu May 19 22:31:39 2011 Seq name: gi|292606558|gb|ADGG01000052.1| Fusobacterium sp. 1_1_41FAA cont1.52, whole genome shotgun sequence Length of sequence - 91816 bp Number of predicted genes - 75, with homology - 75 Number of transcription units - 28, operones - 16 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 232 346 ## COG0675 Transposase and inactivated derivatives + Prom 234 - 293 4.3 2 2 Tu 1 . + CDS 363 - 914 631 ## COG1281 Disulfide bond chaperones of the HSP33 family + Term 919 - 957 7.2 - Term 910 - 941 3.1 3 3 Op 1 . - CDS 950 - 1219 302 ## gi|294783726|ref|ZP_06749050.1| integral membrane protein 4 3 Op 2 . - CDS 1294 - 1563 207 ## gi|294783727|ref|ZP_06749051.1| hypothetical protein HMPREF0400_01723 - Prom 1594 - 1653 12.6 5 4 Op 1 1/0.000 + CDS 1717 - 2373 965 ## COG0283 Cytidylate kinase 6 4 Op 2 1/0.000 + CDS 2393 - 4315 2059 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase + Prom 4335 - 4394 4.2 7 4 Op 3 . + CDS 4530 - 5807 1812 ## COG0104 Adenylosuccinate synthase + Term 5991 - 6026 2.2 8 5 Op 1 . + CDS 6147 - 8330 2648 ## COG5324 Uncharacterized conserved protein 9 5 Op 2 . + CDS 8351 - 8884 503 ## FN1008 hypothetical protein 10 5 Op 3 . + CDS 8898 - 9371 533 ## COG1683 Uncharacterized conserved protein 11 5 Op 4 . + CDS 9380 - 10378 1050 ## EFER_3822 hypothetical protein 12 5 Op 5 . + CDS 10380 - 10751 521 ## FN1009 hypothetical protein 13 5 Op 6 . + CDS 10765 - 11328 549 ## FN1008 hypothetical protein + Term 11340 - 11373 3.1 + Prom 11411 - 11470 12.4 14 6 Tu 1 . + CDS 11582 - 18307 9412 ## FN0387 hypothetical protein + Term 18320 - 18369 7.2 + Prom 18329 - 18388 12.5 15 7 Tu 1 . + CDS 18544 - 22743 5642 ## FN0387 hypothetical protein + Prom 22783 - 22842 5.3 16 8 Op 1 . + CDS 22921 - 24099 1491 ## FN0387 hypothetical protein 17 8 Op 2 . + CDS 24114 - 25361 1931 ## FN0387 hypothetical protein + Term 25385 - 25426 8.1 + Prom 25435 - 25494 9.4 18 9 Tu 1 . + CDS 25658 - 31861 7855 ## Lebu_0887 autotransporter beta-domain protein + Term 31887 - 31927 7.0 19 10 Tu 1 . - CDS 31921 - 32919 1262 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 33029 - 33088 10.3 + Prom 33017 - 33076 10.0 20 11 Op 1 . + CDS 33106 - 33504 635 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 21 11 Op 2 . + CDS 33519 - 34823 1756 ## COG1032 Fe-S oxidoreductase 22 11 Op 3 . + CDS 34820 - 36142 1444 ## COG1032 Fe-S oxidoreductase 23 11 Op 4 . + CDS 36171 - 37505 1317 ## COG1032 Fe-S oxidoreductase 24 11 Op 5 . + CDS 37530 - 39680 2506 ## BCG9842_B2017 putative cytoplasmic protein - Term 39765 - 39801 -0.1 25 12 Tu 1 . - CDS 39837 - 40700 487 ## COG1560 Lauroyl/myristoyl acyltransferase + Prom 40857 - 40916 6.3 26 13 Op 1 . + CDS 41012 - 41737 657 ## COG0491 Zn-dependent hydrolases, including glyoxylases 27 13 Op 2 . + CDS 41730 - 42635 642 ## Lebu_0283 hypothetical protein 28 13 Op 3 . + CDS 42651 - 43352 735 ## PTH_2268 hypothetical protein + Prom 43432 - 43491 5.6 29 14 Op 1 . + CDS 43534 - 45081 1055 ## Hoch_4770 GH3 auxin-responsive promoter 30 14 Op 2 . + CDS 45078 - 46418 1698 ## COG1032 Fe-S oxidoreductase 31 14 Op 3 . + CDS 46434 - 47171 615 ## gi|294783751|ref|ZP_06749075.1| primosomal protein N - Term 47455 - 47494 7.3 32 15 Tu 1 . - CDS 47502 - 48971 2300 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 49190 - 49249 12.1 + Prom 48956 - 49015 11.2 33 16 Op 1 . + CDS 49182 - 49769 754 ## COG1739 Uncharacterized conserved protein 34 16 Op 2 1/0.000 + CDS 49849 - 50610 930 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 35 16 Op 3 11/0.000 + CDS 50632 - 51975 1955 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 36 16 Op 4 1/0.000 + CDS 51977 - 52927 1367 ## COG0462 Phosphoribosylpyrophosphate synthetase 37 16 Op 5 . + CDS 52927 - 53580 732 ## COG0009 Putative translation factor (SUA5) 38 16 Op 6 . + CDS 53585 - 54019 474 ## FN1994 hypothetical protein 39 17 Op 1 . + CDS 54520 - 55233 772 ## FN1995 hypothetical protein 40 17 Op 2 . + CDS 55230 - 55937 834 ## COG1738 Uncharacterized conserved protein + Term 55954 - 56008 5.5 - Term 56206 - 56253 8.0 41 18 Op 1 . - CDS 56287 - 57081 1084 ## COG5266 ABC-type Co2+ transport system, periplasmic component 42 18 Op 2 . - CDS 57152 - 57571 690 ## FN1808 hypothetical protein 43 18 Op 3 12/0.000 - CDS 57584 - 58462 1243 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 44 18 Op 4 42/0.000 - CDS 58464 - 59357 800 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 45 18 Op 5 25/0.000 - CDS 59375 - 60064 234 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 46 18 Op 6 1/0.000 - CDS 60064 - 60972 1333 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 47 18 Op 7 . - CDS 60985 - 61899 1166 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 61960 - 62019 3.7 48 19 Tu 1 . - CDS 62132 - 62488 173 ## FN1814 hypothetical protein - Prom 62525 - 62584 8.9 - Term 62632 - 62686 12.1 49 20 Op 1 1/0.000 - CDS 62706 - 63533 1277 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 50 20 Op 2 36/0.000 - CDS 63591 - 64376 689 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 51 20 Op 3 30/0.000 - CDS 64366 - 65223 594 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 52 20 Op 4 . - CDS 65210 - 66385 1288 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 66418 - 66477 14.2 + Prom 66366 - 66425 10.5 53 21 Tu 1 . + CDS 66612 - 67049 401 ## gi|294783772|ref|ZP_06749096.1| conserved hypothetical protein + Term 67058 - 67113 1.5 - Term 66907 - 66959 2.1 54 22 Tu 1 . - CDS 67160 - 67711 549 ## COG1971 Predicted membrane protein - Prom 67734 - 67793 5.7 + Prom 68140 - 68199 11.1 55 23 Op 1 . + CDS 68271 - 68714 363 ## FN0145 hypothetical protein 56 23 Op 2 . + CDS 68711 - 69187 199 ## FN0146 hypothetical protein 57 23 Op 3 . + CDS 69231 - 69533 397 ## FN0111 hypothetical protein 58 24 Op 1 4/0.000 - CDS 69775 - 70359 691 ## COG0218 Predicted GTPase 59 24 Op 2 18/0.000 - CDS 70374 - 72680 3375 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 72712 - 72771 10.4 60 25 Op 1 24/0.000 - CDS 72957 - 74249 1795 ## COG1219 ATP-dependent protease Clp, ATPase subunit 61 25 Op 2 29/0.000 - CDS 74260 - 74841 914 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 74873 - 74932 3.8 - Term 74854 - 74911 15.6 62 26 Op 1 1/0.000 - CDS 74951 - 76150 1575 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 63 26 Op 2 1/0.000 - CDS 76259 - 77923 1596 ## COG0608 Single-stranded DNA-specific exonuclease 64 26 Op 3 32/0.000 - CDS 77931 - 78293 522 ## COG0858 Ribosome-binding factor A 65 26 Op 4 15/0.000 - CDS 78308 - 80509 3212 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 66 26 Op 5 22/0.000 - CDS 80523 - 81053 815 ## PROTEIN SUPPORTED gi|237742963|ref|ZP_04573444.1| ribosomal protein L7Ae 67 26 Op 6 32/0.000 - CDS 81046 - 82107 637 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 68 26 Op 7 . - CDS 82134 - 82607 484 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 82667 - 82726 10.9 - Term 82617 - 82655 5.4 69 27 Tu 1 . - CDS 82728 - 83816 1391 ## COG5438 Predicted multitransmembrane protein - Prom 84038 - 84097 7.6 - Term 84075 - 84111 4.1 70 28 Op 1 1/0.000 - CDS 84124 - 84381 422 ## PROTEIN SUPPORTED gi|19705275|ref|NP_602770.1| SSU ribosomal protein S15P - Prom 84431 - 84490 5.7 71 28 Op 2 14/0.000 - CDS 84493 - 86673 1321 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 72 28 Op 3 1/0.000 - CDS 86663 - 88021 1106 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 88057 - 88116 7.8 73 28 Op 4 . - CDS 88257 - 89192 996 ## COG1559 Predicted periplasmic solute-binding protein 74 28 Op 5 . - CDS 89202 - 89858 719 ## COG2184 Protein involved in cell division 75 28 Op 6 . - CDS 89874 - 91463 2213 ## COG0513 Superfamily II DNA and RNA helicases - Prom 91486 - 91545 9.8 - 5S_RRNA 91582 - 91697 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Predicted protein(s) >gi|292606558|gb|ADGG01000052.1| GENE 1 2 - 232 346 76 aa, chain + ## HITS:1 COG:DR0178 KEGG:ns NR:ns ## COG: DR0178 COG0675 # Protein_GI_number: 15805214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 1 75 306 380 409 94 54.0 5e-20 RILSYKAKWYERTIVRVDKFFASSQICNCCGYRNEEVKDLSMREWTCPVCGAVHNRDINA AKNILKEGLRILGISA >gi|292606558|gb|ADGG01000052.1| GENE 2 363 - 914 631 183 aa, chain + ## HITS:1 COG:FN1610 KEGG:ns NR:ns ## COG: FN1610 COG1281 # Protein_GI_number: 19704931 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Fusobacterium nucleatum # 1 183 103 285 285 305 88.0 3e-83 MRIIKDMGLKEPYIGITNVDYSSLPDDISAYFYNSEQIPTIISLACEDTNDGKILCSGAF MVQLLPGADEDFITKLERKAEAIRPMNELMKGGMSLEQIINLLYDDMDTADDSLVEEYEI LEEKELKYNCDCNSDRFQRGIMTLGKEELKHIFEGEKEIEAECQFCGKKYKFTENDFEDI LKK >gi|292606558|gb|ADGG01000052.1| GENE 3 950 - 1219 302 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783726|ref|ZP_06749050.1| ## NR: gi|294783726|ref|ZP_06749050.1| integral membrane protein [Fusobacterium sp. 1_1_41FAA] # 1 89 1 89 89 152 100.0 5e-36 MRNDVWKKIGYVICGSIGLSLSWYVFYSLLYKFGFEQTGPKIYNILCYTILNLVLLGLIF KKNEIKKTDTYFILVLMVLGIGAQFFIHN >gi|292606558|gb|ADGG01000052.1| GENE 4 1294 - 1563 207 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783727|ref|ZP_06749051.1| ## NR: gi|294783727|ref|ZP_06749051.1| hypothetical protein HMPREF0400_01723 [Fusobacterium sp. 1_1_41FAA] # 1 89 1 89 89 98 100.0 1e-19 MNTNIWKKIKFIIYYFIGFFAFRYIFDNLLYKFGFEQTTPKIQHIFYSSILFSVTFGLFF KKNEIKKIDIYILLIIIVFAIGVYFLIHN >gi|292606558|gb|ADGG01000052.1| GENE 5 1717 - 2373 965 218 aa, chain + ## HITS:1 COG:FN1607 KEGG:ns NR:ns ## COG: FN1607 COG0283 # Protein_GI_number: 19704928 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Fusobacterium nucleatum # 1 218 1 218 218 292 83.0 3e-79 MKNLIVAIDGPAGSGKSTIAKLLAKKYNLTYIDTGAMYRMITLYLLENNIDISDLKEVER VLNTVNLDMQGDKFYLDNVDVSTKIREKRINDNVSKVASIKIVRSNLVDLQRKISNNKDV ILDGRDVGTVIFPNAQVKIFLIASPEERARRRYNEFLEKKTEITYDEVLKSIKERDHIDS TRDESPFVKADDAIELDSTNLTIEDVINFISKEIEKAK >gi|292606558|gb|ADGG01000052.1| GENE 6 2393 - 4315 2059 640 aa, chain + ## HITS:1 COG:FN1606_1 KEGG:ns NR:ns ## COG: FN1606_1 COG1519 # Protein_GI_number: 19704927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Fusobacterium nucleatum # 1 426 1 426 426 666 91.0 0 MYNLLRKVGLTLYRPFMKEKMKTFIDKRLSQDFSDLKDEEYIWIHCSSVGEVNLSEDLVK KFYSISRKNILISTFTDTGYENAVKKYSDKKKIKVIYFPIDDKEKINEILNKIKLKLLVL VETELWPNLINEVNKKNSRIIVVNGRISDRSYPRYKKLKFLLKSMLQKIDYFYMQSEIDR ERIVSLGADEKKTENVGNLKFSISLEKYSDDKKDEYRKFLNIGDRKVFVAGSTRTGEDEV ILDVFKKIKNYVLIIVPRHLDRLPKIEELIKENNLTYVKYSNLENNISTGKEDIILVDKM GVLRKLYSISDIAFVGGTLVNIGGHNLLEPLFYRKAVIFGKYTQNVVDIAKEILRRKIGF QVNDTEEFIEAIKNIESGKISDEEINSFFEENKMIALNIVKKENLIMNNIKDEAKDLWKH FFHSEKSNYNIYMYKLLDYPEYIMYDNDVMKAKKSKWNEYFGNSNPIAVEIGTGSGNFMY QLAERNPNKNFIGLELRFKRLVLATQKCQKRNIKNVAFLRKRGEELEDFLAENEISEMYI NFPDPWEGTEKNRIIQERLFETLDKIMKKDGVLYFKTDHDTYYSDVLELVKTLKNYEVVY HTSDLHNSEKAENNIKTEFEQLFLHKHNKNINYIEIKKLV >gi|292606558|gb|ADGG01000052.1| GENE 7 4530 - 5807 1812 425 aa, chain + ## HITS:1 COG:FN1605 KEGG:ns NR:ns ## COG: FN1605 COG0104 # Protein_GI_number: 19704926 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Fusobacterium nucleatum # 1 425 1 425 425 813 96.0 0 MAGYVVVGTQWGDEGKGKIIDVLSEKADYVVRFQGGNNAGHTVVVDGEKFILQLLPSGVL QAGTCVIGPGVVVDPKVFLDEIDRIEKRGARTDHVIISDRAHVIMPYHIEMDKIRESVED RIKIGTTKKGIGPCYADKISRDGIRMADLLDLKQFEEKLRANLKEKNEIFTKIYGVEPLD FDTIFEEYKGYIEQIKHRIVDTIPIVNKALDENKLVLFEGAQAMMLDINYGTYPYVTSSS PTLGGVTTGAGVSPRKIDKGIGVMKAYTTRVGEGPFVTELKNEFGDKIRGIGGEYGAVTG RPRRCGWLDLVVGRYATEINGLTDIVMTKIDVLSGLGKLKICTAYEIDGVIHEYVPADTK SLDRAIPIYEELDGWNEDITQIKKYEDLPVNCRKYIERVQEILDCPISVVSVGPDRNQNI YIKEI >gi|292606558|gb|ADGG01000052.1| GENE 8 6147 - 8330 2648 727 aa, chain + ## HITS:1 COG:FN1603_3 KEGG:ns NR:ns ## COG: FN1603_3 COG5324 # Protein_GI_number: 19704924 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 411 676 2 267 273 443 86.0 1e-124 MRTLLLLRGIQASGKSTWIKENNLEPYTLSADNIRLNIANPVLLEDGSYEISQKYNKVTW ELLYKYLEMRMQNGDFTIIDATHSDLKLLNKYKDLASTYKYTMYCLEFDVPLEEALRRNR ERDSYKYVPERVIERTYETIKNNEKFPSALKKIESIDEIINFYTADVNQYEKVVIIGDIH SCAEPLKEVLKDFNEETLYIFVGDYFDRGIQPVETFNIMLDLLEKPNVILIEGNHEEKSM KKFIYDEEKYTKSFEETTLLPLLKEYDVDYVRASLKKIYKKLRQCFAFEFRGKKFLCTHG GLPLVPKLTLVSAKEMIHGVGKYETEIGEIYSENYKKGLCQGFIQVHGHRGVNDGQFSYC LEDRVEFGGELKVLTIDNEGKIKKTGIKNSVYNKGLKLPMSGAVEKVEFNTANELINEMI RHQFITVKECEYNLISLNFNREAFNKKKWNDLTIKARGLFVDKDSGEVKIRSYNKFFNFG ERHVNLGYLKKYATYPIRAFKKYNGFLGLASVVNNEIVLTSKSVTSGKYKDIFQDIWNKV ESEVRELLKQTMIENNCTAVFEVVSPEYDPHIIKYDKEHLYLLDFIENKLDLDTHNIDLE FSENLMKKVEFSSDLLTKKEELTRLENYDELYNFLAEKEKSLEEFEGYVLCDNSGFMFKF KLPYYNLWKTRRAWLERYRSALAKGKKVEVTEKDEHRHFKKFLLKLGKDKLQELSIIDVR ELYEKEN >gi|292606558|gb|ADGG01000052.1| GENE 9 8351 - 8884 503 177 aa, chain + ## HITS:1 COG:no KEGG:FN1008 NR:ns ## KEGG: FN1008 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 171 6 178 179 191 63.0 7e-48 MSNRVLFLLIAGVFFVFASIFLIIGIIYEKIYQNNMKGYDKEVEGKVLEVIKSGKDGVIG KLFATFVVYQYEINNHKYIVRPYSFRKNSAINQRYFDSENVTCIIYRGNHGGTSQTKYRT GEDIIVKYNSNNPKRHEILNDKDKTFTFKVFKIVGKILMIIPLIFLIISFFAKGQVQ >gi|292606558|gb|ADGG01000052.1| GENE 10 8898 - 9371 533 157 aa, chain + ## HITS:1 COG:FN1602 KEGG:ns NR:ns ## COG: FN1602 COG1683 # Protein_GI_number: 19704923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 156 1 156 156 241 80.0 3e-64 MKKKIKVLISACLLGDNVKYSGGNNLTPELVTLLEKYNVDIVKVCPECFGGLPIPRVPSE IRENKVFSKDNRDITEEFLAGAEETLKVAKENEVNFVILKERSPSCGSTHIYDGSFSGNI IPGQGITAKRLTEEKIKVFSEENLEEIEKYLVELAKN >gi|292606558|gb|ADGG01000052.1| GENE 11 9380 - 10378 1050 332 aa, chain + ## HITS:1 COG:no KEGG:EFER_3822 NR:ns ## KEGG: EFER_3822 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 15 330 16 324 324 208 39.0 3e-52 MENLYNEIYSLLPIEEKKEILENLAKKYNMELLRFETFSKYSKSTFTAIFKYKESEFVFV PGDTVTLGYEGLPKNLSDETLKGLKYCLDETEDLDTVLGEYIRDNFSKLRKVTIKPMLVE RELQTVAWKKSNLDELKEFDSDLLKDYNEFKSSDYNRLTLDETARFTKVGNDIEIELYDD ISYEELCENLKDKGFSLANLDEWEYLCGGGCRTLFPWGDDLDYNMNLLYFSKEDNDKYDL EEPNFFGLSIAYDPYKMEIVEDDDDYVFKGGDGGCNVCGGYGDFLGYLPCSPYYTQEHMN SINILDDSIVNEYDDELDGDFNFYRRIIRIGE >gi|292606558|gb|ADGG01000052.1| GENE 12 10380 - 10751 521 123 aa, chain + ## HITS:1 COG:no KEGG:FN1009 NR:ns ## KEGG: FN1009 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 123 1 114 114 169 81.0 4e-41 MKKILILLLMLILGIVSYAKEDDILGTWLIKENGKIVEIYKNEAGEYTGKIKENNFIFLE QNNNLTYDKEKNSLAYFNLKFLEDKFSWYVWINIEKDGNLFIKGTGNTEVGKYVRELHLI RQK >gi|292606558|gb|ADGG01000052.1| GENE 13 10765 - 11328 549 187 aa, chain + ## HITS:1 COG:no KEGG:FN1008 NR:ns ## KEGG: FN1008 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 177 6 179 179 151 50.0 9e-36 MVKLLTSGTMSNRMLLLIFVAFFSIFPAMFLIFGIMMRRGQQNNISSYDGEVKGEIIEVL NSEKSAMYATYPIYQYEVNKHKYIVKPNFTFFNSSLDKKYHDSENVTCITYLNKHGGNTR TKYKAGESIIIKYDIEDPKNHEILNDKDKNFAYDSRRIVALLLMIFPLIFLIASFFIKGQ AVFTPAN >gi|292606558|gb|ADGG01000052.1| GENE 14 11582 - 18307 9412 2241 aa, chain + ## HITS:1 COG:no KEGG:FN0387 NR:ns ## KEGG: FN0387 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 767 2241 236 1724 1724 1122 48.0 0 MANNLSTVEKNLRSIAKRYENVKYSVGLAVLFLMKGTSAFSDDNKIQELEKQKDILTDVK KEKAEIKEIKKVTKATPKLKASWANMQFGANDMYSNFFATPKTKVDKASIVKSENTILLA SADNNGSLPTFSKISSDIEETYAPTTEEINTSKGNLRNSIGNLQNKINEARKENGKEIKG LKLELVQLMEQGDQVVKSPWSSWQFGANYMYNNWNGAYKGRGDKVSEGAITNRATNSLDP LAKNIAIPNLKSTKYGATDLNIVEEPNASVSVTTRITPVIINKTAARKNQEPYRFNLPYF EAREIGTPSIPTVNAPNITVSGFADFPGRWINGVAGRYSYWHTNNGIGNTDGNLYQTSVE KGEVLKRRGGTVNRIQLKNYQRGQIQVRPVNVDVGVEPPENIDLAGDVPTFFMSLEDIPY SYFGKNSKLSLINENNNIDGQIFIHFETEGNTTDKFDKLKADGHISTEEFNEIRKYTDDT DFKNDQGGELYHVNRGTVELGGTGIRYVQTTFAGNMGRRVNLVENRGNIISMNYEEGNTK THSNAIFLYGPDTGSGYTGTQHIYANNKTGKISMYGEKGYLAVFTASSTLARGDVSFIND GEANLYGRNSVGLFITKDARGKLSQKSNFIMNKPINLQGDNTTGLYIENSGDGIKNDRNT ARFVIGAKDNATIPAYVPENSLLNAANSKEANHNKVGGDENLAEEIVGIYLNNPTAELHV KVPQLEIEKFAKKSIGIFSKDGEVKATDGNISIKGGEDNIALYANGGKIDYTGDINVNKS TLTGAKGNKNGIGNMAVFAASPNNYVKVNGNINMDTRDTVAIYSDDTKVDLNGKLNIKLK PESTGKNIAIYAKNSSNTSPVTVQTNQSKIEIDGKKDNDTITNQGLALYAEQGGQIVANG TSLTNGLYMKVTNGGSAIVSDGATSNVQAKYSTIDYDGNGYALYTKNNGNIDVRNAKINL YGKSTGFERSGVLSDPFTINLANSKFYAHSNDVSIMSLKNIPSLNFSTLAGTFFSGYLGG AQVHGASGAKNYKIATIDGIGAFNIDSNYDKSRALNPANEGTNDYVLTRHLLMQRAKINL KSGNNVRAILSSRDIADLGEQTAVGLANYVGDEINLETNTSINVDRTDKASGAVGVGSVG LFADGGKVNVASGATINVEKENNFVNGRSVGIYASNGARVSNAGTVNVGGKGSIGILGMT RRIDANGNPFSSGSTSLELRNESTGVINMDGESAVGMYVLNNHSFSFNPINNGYNDGIIN ISGNNAIGMLTTGAHTYNNNIININSDQGGIGIYATAGTAANRHTSMTGSGAGSVINLKS SVSKDNPNIGIYTEILEDGYGSVISNSGDIIGGDNTYGIYGEATVHDTGKIKLGNNSVGI FTTANATGYFTDVNVIDGEIEVGNNSKGIFVSGRAAASVINGAKMTIGDNSFAYVLDTKE IPADPVAGTPVIQSVLESNSTDETKLGNNSTFIYSSDKTAIITNNTPLRTTGNKNYGIYA SGNITNLANMDFSSGVGNVGILNVRDIGSTTSKAINGQAGAASQPTITVGKSDASNENYS IGMAAGYLDKNGVLKQTGHIENYGKINVVEESGIGMYAAGSGSKAINHVGAEINLSGQDS IGMYLTDSAIGENYGTIRTAPNNTKDGIVGVVANNNAIIKNYGTIEIKGQGNTGILLANG GDNKENDPVNLDGAEGVVRKKIEPTGKKINGVEIVAPGNGTAKIKRKGQTVIPTLVDTIP ARPNEVTAGGTTLDLRSTVLADTPSLTRASSLGMYVDTSGRQFTNPIQGLEHLTNLKNVN LIFGIEATNYTNSKDIKVGANILNPYNKIISKISRNGKTKFNLNSGSLTWIATGTQDSSG KFNAVYLSKIPYTSFTKDKNTYNFMDGLEQRYGAKNASLREESLFNKLNQIGKGEPELFA QAIDEMKGNQYANTQQRVQATGDILDKEFNYLKNEWSNLSKDSNKIKTFGAKGEYKTNTA GIKDYKSNAYGVAYVHEDETVRLGESAGWYTGIVHNTFKFKDLGNSKEEQLQAKLGIFKS VPFDENNSLNWTISGDIFAGYNKMNRRFLVVDEVFNAKGRYHTYGLGLKSQLNSEFRLSE GFSIKPYVAIGLEYGRVSKIKEKSGEMKLDIKSSDYLSVRPEIGTELAYRHHFGTGAFKA SVGVAYENELGRVANAKTKARVANTSADWYELRGEKEDRRGNVKFDLNLGLESGTYGVTA NIGYDTKGENLRGGVGLRVKF >gi|292606558|gb|ADGG01000052.1| GENE 15 18544 - 22743 5642 1399 aa, chain + ## HITS:1 COG:no KEGG:FN0387 NR:ns ## KEGG: FN0387 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 557 1398 1 837 1724 396 39.0 1e-108 MDNNLPMVEKKLRSAAKRYENVKYSLGLAILFLMKGTGAFSEDNKIQEAERKKDVLSKDQ TEKALNKETKAISKAGHQLKASWVNMQFGANDMYSNFFVTPKTKVDKGSIVKSENTILLA SANNSGSLPTFSKISSDIEETYTPTTEEINANKGNLRNSIGNLQEKINLARRENAKEVEG LKLELIQLMEQGDQVVKSPWSSWQFGANYMYNEWNGTYKGRGDKTSNQILTRNNSGSVSR FIAGSSTTTSYGSTNLAIVKEPIVEIKITPEINPKIIERSALGYTPPEPEIRYPTFEPRF ISSPIKPSAPAEITPTTFEPPDIKYKGSGFHQWSQIGMPKLAGHNVIIQNYDTYDTVSKT DGTTKGIFNIEVGKLSGGARVRWWGANLDGTANPDIQLKGETNIPNVATPGVTVGGQNPG GPGTHWLDDGQVTTRGMNAFINELRDHDATISGNYVLTNRGGENNGGNRIFLSHNPASLG SAGYDGLNRSIIRTATFDGNLTLHGTPTPYTGVGAHSDVTVGVEHQHWTNTKHDVYSIFN NAGNITLASGNNLVGILIDIERNYSGDNASAHKTINSGKIEIENAENSIAIDYGEYETWV FKSELTVGNVIIGGKKNYGLRMSNIYPSNPDFFDKGVTIKSGGANKKILVKGTENVGVSI AKFLSSAKDSNPIAGITEGLNIEVAGEKNLGFLRHKTYANNPGDMVFNTTTMGTFTFGNG AKNSTLIRTDKHGIQVRKDISVTGKDSAGKDYTGSGNTVLHSNGQTQHVYNYNTITVGKG FTKTVGMAATGTKASTIDNVVNEGTIALQAKQSIGMYTDKFSQGKNTGSIKLSALGDLAK DGTYGDAENIGISNNGKFTFSGDIEINGKKSSGIYNTGITTITVGTNPTDKTNIKATNGA TGLYSKGTGSSITSNAGNKLNITVEAGTTKEGLAVYAENEGEITLHNANINVIGGSAGVA AYDNNTKIDLTGATLKYDGKGYAAYSDGRGEIYLNKANIELRGHSTLMNVDWSVPAANRP IKTSATNVTVFSNDVIGINVNNLGTQNISNLSAIKSSLGVVLNPGTEAGRTFNKFKELAI DNGTINFNVATDKNEGNSTPGGFFFKKVLGQRLRLNVNENLTARLSSATANEFYNGQVVG LEANSSNKATNNTEAQVNIASGKILDVARTDRTDKGGVGVFVNYGIAKNDGTINVEKDSV ANSKAVGIYAVNGSEVTNNGSVNVSGEHSIGLLGMAYRTDHAGNPITTDGFGDGKMFLRN ESTGVINMDGKAAIGMLLNNNKPRSFPNSFAIFYSLENYGDINMSGNKAIGMLGRNTWME NQKNININSDQEGIGMSSAGEHTIYVRNDTTGIIKLKSSVSKDKPNIGMFTNESSTSLDN FGTIIGGDNNYAMYGAGII >gi|292606558|gb|ADGG01000052.1| GENE 16 22921 - 24099 1491 392 aa, chain + ## HITS:1 COG:no KEGG:FN0387 NR:ns ## KEGG: FN0387 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 389 901 1297 1724 283 48.0 6e-75 MGDNSFGFVLETKESPTMATTFESNYTQETKLKNNSVYIYSSDKTAIITNNTPLKTTGDK NYGIYATGNVTNLANMDFSSGVGNIGILNVRDIGNTTSKAINGDPTLGIYPTITVGRSDI SNKNYSIGMAAGYTDDNGVLKQIGHIENYGTIKVEKDNGIGIYATGSGSKAINHGTIELS GKNTTGMHLDNNAVGENYGTIKTIPNPTNDGIIGVYVKNGAVIKNYGNIIIDGKNNTGIY LARGKNDPAGVLPTVTNGAVAVKDRVDSQSDPTKRVAGIEIKAKPGAAVTVTRDKKPVTP TFVDTTVASPRASTVKVGSTEIIDLTTTGLGDIPSVSMASEIGMYVDTSGVNYTNPIQGL HHLTALKDVNLIFGTEASRYTTSKDIKIGKIF >gi|292606558|gb|ADGG01000052.1| GENE 17 24114 - 25361 1931 415 aa, chain + ## HITS:1 COG:no KEGG:FN0387 NR:ns ## KEGG: FN0387 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 415 1307 1724 1724 541 66.0 1e-152 MITNLLAGGSGKKFKITSGSLTWIATGTQNPNDDTFDAVYLSKIPYTAFAKDKNTYNFMD GLEQRYGAKDASLREESLFDKLNQIGKGEPELFAQAVDQMKGHQYANTQQRVQATGDILD KEFNYLRNEWSNPTKDSNKIKTFGVKGEYNTNTAGIEDYKNNAYGVAYVHEDETVRLGES VGWYTGIVHNTFKFKDLGNSKEEQLQGKLGIFKSVPFDENNSLNWTISGDIFAGYNKMNR KFLVVDEVFNAKSKYHTYGLGLKNKLSSEFRLSEGFSIKPYVAIGLEYGRVSKIKEKSGE MKLDIKSSDYLSVRPEIGMEFAYKHNFGAGAFKASVGVAYENELGRVANAKNKAKVAGTD ADWYDLRGEKEDRRGNVKSDLNIGWDNQKFGVTANVGYDTKGHNVRGGVGLRVIF >gi|292606558|gb|ADGG01000052.1| GENE 18 25658 - 31861 7855 2067 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0887 NR:ns ## KEGG: Lebu_0887 # Name: not_defined # Def: autotransporter beta-domain protein # Organism: L.buccalis # Pathway: not_defined # 609 2067 1341 2831 2831 910 42.0 0 MGNNNLQTTEKNLRSIAKRYENVKYSVGLAVLFLMKGTSAFSDDNKIQELEKQKDILTDA KKEKAKVKETKKIEKVSKKLKASWANIQFGANDLYSNFFATPKTKVDKASIVKNEKTVLV ASADNSTSLPMLAKLSSDIEKTSTPTTEEINTSKGNLRNSVGNLQEKINNARTENAKEVQ GLKLELVQLMEQGNQVVKSPWSSWQFGANYFYDNWGSAYKGRGDKIKNIGVIEREVDVLT GSISKSSNKYAELNITKRENPYKLISVKEVNPPVKDFKFSPVFSLRKPTKLEALKLDIKT ISPEIPATFKFSINTPVIPTINPAQVNIETVELRNYGNVWNMGIVGRQDPEYKYSLFTIP SGTYNLNSDSKSIDGVHSAPTVVDMSIIGQNVKVENGTVLNINKVGGRAVSIDINPGWQD GGPQWPETSSTFTNEGTINLNAINTAAIEAQTETTSADYYAAGAPASTNHHWIHKKEIYG INKGIINGNNSKQVAMTFVREQVPGREQQFLTNAASGTITMNGAKSMAFSFNVDDLYAEA KNEGKIILNGINNYGFAFGKQIANNHLKENSIISNETTGTIEVNGDNSGGFALQEMIDAS KNPYIKNINITNKGKININSKESFGMYSEQMTAKNTGEINIIENSTKSIGLYATKKNTVT TELINEGKINLKTKNDSNIGLFTDNAKVINDKDGEVNILKGENIGALISGTGVGENLGKI SGVADGSIGILTKDTGSFINKGKITVNAKASSTNKGAIGIFANTGSSFTNPSGKLDINVS GKNSVGVYSKGAVKLGKASVSAADNAINFFADANGNIEFEAGKTVTSTTKSGALLFYDGN SNGKIKLVGDLKATIEGGNTATERGTAFSYKSSSASTNGSITGYNNGLSYGSFTPGEVQT FFDNLFGTGATGSSTLNKLELTMKPGSRLFISPNVKAKISQLVTDNLFSGITGAPVISPN SSDDYVRNLLLKSELELDRAVNLDSASETYNKLEISNSSIINNSTISGTKDKQYAMVQEN DEANRAYVTLLNNQNKEINLAGKDSLAMYAKNGYIINKGRIELSGTGSTAIYGKDNTLIK NTNTSKIKLNGDKSAAIYYNNTDTASTGENIENYGEIELNGSKDTGIAYNSVSIPTTNPT LVKNFADIKINGSESIGIHSEVTQSNPYVIENQGNITITAQTQDIKKPAVGIHTKDSLAK IINGNNGNIKVSKNNIAILGTSVDNQGNIEVDTAGTAIYSKGGTVNLQSGDITLKGGSQN NETKAVILNGTNQTLNRVGGNINSEDYSHVIVNTGSGNTINLAGSDVVLKNNSIYAYSND KNSKIYNNVNLKFDGTRGENLGIYSNGLVENYANIDLRKGYGNIGIYSYGSKAKNTGIIT VGASDIANDLYNIGMASGFTSGHSPRDAKDTVITPKYTGEVENAGTINVNGKGGIGLFST GRGSVARNTGNIILNNDDTIGIYADEGATVYNSGTIRTGRTGLKGVQGIVLGVGSKLHNT GNIIIDADNAAGVKLKGGTITLEGNIIVTGAGSERIGANTTEDMSLNFSGLDIKHDKNTR DVKIYKDNKLEKPKIVSYKEIGQQPRNVDANSIGLYFNTSGEFKQNPIRNLAVLTDEADF IIGAEAAKRTTSKYIEINDPQMLKPYRETIMYNPRIRKWNTYSGSLTWIATSVLDSATAL PEKVYLAKIPYTTFAGDEAKPVAKTDTYNFLDGLEQRYGVEKLGTKENQLFQKLNSIGNN EEVLFYQAIDEMMGHQYANTQQRVEATGNILDKEFNYLRNEWSNPSKDSNKVKTFGARGE YKTNTEGVIDYKNNAYGVAYVHEDETVKLGESTGWYTGIVHNTFKFKDIGNSKEEQLQGK LGIFKSVPFDHNNGLNWTISGDIFAGYNKMNRKFLVVDEVFNAKGKYHTYGLGLKNELSG EFRLSEGFSIKPYVAIGLEYGRVSKIKEKSGEMKLKVKSNDYFSIRPEIGAELGFKHHFD RKTVRVGVSVAYENELGRVANGKNKAKVAGTDADWFNIRGEKEDRLGNIKSDLNLGWDNQ VVGVTANVGYDTKGHNVRGGVGLRVIF >gi|292606558|gb|ADGG01000052.1| GENE 19 31921 - 32919 1262 332 aa, chain - ## HITS:1 COG:FN0108 KEGG:ns NR:ns ## COG: FN0108 COG1619 # Protein_GI_number: 19703456 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Fusobacterium nucleatum # 1 332 6 337 338 572 89.0 1e-163 MKKKVIGVYAPSSPAHIWFEEKYLFAKKQLENMGFEIVEGDLVKDRVYQGYRTASAKERA EEIMNLVKNKDIDIMMPVIGGYNSGSLLPYLDFDEIEKSKKKFFGYSDITAIQLAILKKT NLKPIYGGSLIPTFGEYEGISSFLKNTLDNLFFKENYTLEEPEFYSNKLLNAFTDEWKTK KREYIKNEGWKILNEGETEGEVIIANIDTLVSLLATEYVPSFKDKILILEEMNATIDSEE RNLNTLKLGGVFEGVKGLIFGKPEVYNNKNSNLEYIDIIKEVLGERNYPIIYNFDCGHTI PSLIISQDSLLSLKANHKTGIKVEILKNSYID >gi|292606558|gb|ADGG01000052.1| GENE 20 33106 - 33504 635 132 aa, chain + ## HITS:1 COG:FN1006 KEGG:ns NR:ns ## COG: FN1006 COG0454 # Protein_GI_number: 19704341 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 1 132 1 132 132 199 89.0 1e-51 MEYKIIKNDTNYNLDDLTKLLNTSYWAKDRKKETVKKTVENSLCYFVYDSNKNKLIGFAR AITDYTTNYYICDVIVDEEYRGEGIGKKLVDTLINDVELIHLRGLLITKDAKKFYEKFGF YNKEDVMQKDKK >gi|292606558|gb|ADGG01000052.1| GENE 21 33519 - 34823 1756 434 aa, chain + ## HITS:1 COG:slr0309 KEGG:ns NR:ns ## COG: slr0309 COG1032 # Protein_GI_number: 16331878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Synechocystis # 19 410 34 411 473 175 29.0 2e-43 MKIAFLRPNLGGQRSNDAIEPLGFAVLSGLTDRKKHEVLLFDERIEDIPMDLEVDLVVIT TFTLTAKRAYTIADNYRKKGIYVVIGGYHASLMPEEVQEYADTVFVGSAEGNWERFLIEL ENGHPQKVYEEIKLPDISEVVYDRSLFKDKKYSFVVPVQFGRGCMHQCEFCTIGSVHKGD YTHRKVELVIEEIKEIFRTNKRAKVIYFVDDNIFANKKKALHLFNELKKLKIKWACQGSI DIAKDEDLVKLMSESGCIEMLLGFENINIMNIKKMNKKSNYDFDYENIIRIFKKHRILVH ASYVIGYDYDTKDYFQEILDFSNKHKFFLAGFNPALPIPGTPFYERLKNEGRLLYDKWWL DKDFRYGKAAFTPHNMTVEEFEAGILKCKVEYNTHKNIWTRLFDSAANFRHALIYLAVNY INRKEIYNKKGIKL >gi|292606558|gb|ADGG01000052.1| GENE 22 34820 - 36142 1444 440 aa, chain + ## HITS:1 COG:slr0309 KEGG:ns NR:ns ## COG: slr0309 COG1032 # Protein_GI_number: 16331878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Synechocystis # 12 410 22 416 473 198 29.0 2e-50 MRIMLALAKDNIYRFDSLHQRKYYPQITLITLESLIDKKYNAEIVLVDEGVEEYDATSSK YSDEKFDLICISAVISASRRAKEISKFWKDRGAYTQIGGHYATVLSDEALEYFDTVIKGP AEIAFPAFIKDFVEGKPKREYFELVGNDFEYKPLNRKLLTNKKYYKSFGTIVANNGCPNK CTYCSVTKMYSGKNQLKNIDFVVSEIKSNKHKKWVFYDPNFLADKSYAINLMNELKKLKI KWTASATINIGNDIKMLQLMKEAGCIGLVIGLESFIQENLNGVNKGFNNVKEYKRLVSTI QSYGISVLSTLMIGMETDTVESIRQIPDIIEEIGVDVPRYNILTPYPGTPFYEQLKAENR LLTTDWYYYDTETVVFQPKNMSPATLQEEFYKLWQDTFTYKRIFKRLKTSKNKGLKLILE IFSRQHAKKFKKYTKLDFIN >gi|292606558|gb|ADGG01000052.1| GENE 23 36171 - 37505 1317 444 aa, chain + ## HITS:1 COG:slr0309 KEGG:ns NR:ns ## COG: slr0309 COG1032 # Protein_GI_number: 16331878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Synechocystis # 1 399 13 412 473 199 31.0 1e-50 MKITFILPAIGKKKGQRYIKTWKHMEPLMIAVLKSLTPNDIETNFMDDRNELINYDEKTD LVVISVETYTAKRAYEIAKKFREKGIKVLAGGYHPTVEPEECLENFDSIIVGNAENVWLK MLEDCKNNNLQEKYFGTSTSFAMPDRSIYKDRKYSPLALIETGRGCNFSCEFCAIHSYYE KKYYRRPVEEVVQDIKNSGKKYVFFIDDNFVADHNYALEICKAIAPLKIKWVTQGAITMA KNDELLYWMKKSGCKMVLIGYESMNPNILKDMGKGWRSSVGEINELTNKIHSYGIGIYAT FVFGFGDDSQEVFDETVKFAKKHSFFFAAFNHLVPFPKTGVYRRLKEEKRLLSDKWWLDS RYPYGRISFLPLDQTPDELSKKCANARKKFFEWGSILKRALVQFKRSFDLGMFFIFLTQN FNLKNEVLEKYDLPYADNLDEMPK >gi|292606558|gb|ADGG01000052.1| GENE 24 37530 - 39680 2506 716 aa, chain + ## HITS:1 COG:no KEGG:BCG9842_B2017 NR:ns ## KEGG: BCG9842_B2017 # Name: not_defined # Def: putative cytoplasmic protein # Organism: B.cereus_G9842 # Pathway: not_defined # 35 716 27 698 703 194 25.0 9e-48 MNNSINSIALRHLNGVYIAKNTDNNINETLSIEELATLIKKFEGYGYIFSKELAIAISKE ERNTIIDKLKAVIEVIEDFKSDKNYTVFYKNFPDEVINMTETELYINQILHYWFGYLPSN NENITKGEVEPSKLVKARELNLVDDEMIEKLFIDLLSSNVTLSEQYLDDVCVLTNNKSIK ELEKYMEYIQMKETLTTVSNYILQKEGVLVGDFKTATDILRLIAKISGAKLNNKHIHFAY FSRTVLSQLMNKLENLKNIMPDVKRYSKPWHSFFKLYAKKINFNKYPKIRNAVDMLFGDI SYMTERGKINEQINRLPTMSEEELDNFVKEYTVFYGDYIREILSLLNKANENQYEKLLLG LENCVTKVNTRILFQLYDRIINLQAKNETVPRLVNSKGKWRRLRESINLSDELLNRVLQI VENGIKAQLKEKESLGKVYIDEDYKNIMLTTSEKDSNVSLRPMTRGSRIKFNPNAEVLRF FVAWKNLDDKTLKELNAYSDRVDVDLSALTFDENLEFNDVVAYYNQKKSYFAFSGDITNA PEGALEYIDVFDLEKLKKRGDRYVLVEIRSYNGYTFKEINTVYAGVMELTSKEAKEKKNM YSTAITEGFQIVSSERTTNTILVDLRNFEYIWLDMNMDAYKLGVFQNALNDEEIPYLNGL LRYFSRKQYVTMYDLLKLNADVRGVLTKDKKEADIIFEKVDNKNNLALADILSNYL >gi|292606558|gb|ADGG01000052.1| GENE 25 39837 - 40700 487 287 aa, chain - ## HITS:1 COG:FN1016 KEGG:ns NR:ns ## COG: FN1016 COG1560 # Protein_GI_number: 19704351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Fusobacterium nucleatum # 83 285 2 211 226 79 27.0 8e-15 MKLIFDFIIYLIFLIFISIFKILPSKIKLKFSEFLGLFLYYLIPKGRKLSLRNLNLILNE QYNYNLTDKQIKDIAIKSYRNTMKSFLLPFWIYEYAEKYPPIIHNIELLEKLKETNDRIV LATLHYGFFHMSMYPIIDEQMFIIIRPVPNRFIEAYMNKIRFKKNMLSFTEHNIKLLFKH KKSKGFFIMLNDVRKPNGEKVNFFNLPTTASGFTAFFSMREKLPIIVIHNEVDSNNICNI YIDEIIHPENYTNESDLTDRLLKVYEKIILNKPEQWYWFQDRWINKK >gi|292606558|gb|ADGG01000052.1| GENE 26 41012 - 41737 657 241 aa, chain + ## HITS:1 COG:CAC3686 KEGG:ns NR:ns ## COG: CAC3686 COG0491 # Protein_GI_number: 15896918 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 1 222 2 227 245 72 28.0 7e-13 MVNKVKLGINNLYLFKNNNDDYLLLDTALSCKEDVILDEINKLIGDYNKIKVIVITHSHS DHIGNLKLLLDKIKREDKVVIAHNSTKDIMLTGEKVIPNGFYKFSKYISKKLKAKSSENF QKGFENLTEEYFKYVNFLDFKDYKEFSLDKYGFENLKLIYTPGHSKDSISLVYNNDYLFC GDMVQNLCFKYPLIPLFGDDIEELINSWKKAIEKGYSRFYPATSKSYILRENLIKKLEKY E >gi|292606558|gb|ADGG01000052.1| GENE 27 41730 - 42635 642 301 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0283 NR:ns ## KEGG: Lebu_0283 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 301 1 314 314 292 56.0 1e-77 MNKIEFKIIRGNERSEEISEILNEEDMESSIQIKYIKYPNLFESLKLDGVREPLIVPGID TTNYRMVGLGACTIFEDNVAYLNSFRIRTEYRNKVNFGNGYKKIIEELEKEGIDTIITTI LDDNKMAKEILTKQRRNMPIYEFYKNITFYSIKNIKKNSLVIDDLYVTEYKNFRIEIKNK INKKYFVEDYKGIYKFLYKMRKFISFFGYPELPKKNTEMKFLYVDIIAKDDDYSNTLEAI KHLQSMGCSCDFFMIGTYENSSLDMQLKKIKSFKYKSKLYKVYYGEDKNKGKDIKFKFWN L >gi|292606558|gb|ADGG01000052.1| GENE 28 42651 - 43352 735 233 aa, chain + ## HITS:1 COG:no KEGG:PTH_2268 NR:ns ## KEGG: PTH_2268 # Name: not_defined # Def: hypothetical protein # Organism: P.thermopropionicum # Pathway: not_defined # 3 225 2 223 230 154 31.0 3e-36 MELKGDIVKINEISQSEIEEMYILMTEFYNDVEKDVFLKDLKEKDYCIILKDDKNKVKGF STQKIMNFTLGNEEIYGVFSGDTIIDKENWGNLTLFKVFANFFFPFGEKYKNFYWFLIVK GYKTYKFLPTFYKEFYPNYKAETPEKFKNIMDLFGEIKYPNEYNKENGVIEYKGIKDSLK KGVADITEKELKDKNVQFFLESNPDYEKGNDLVCITSLKVENLKEKTLKILFN >gi|292606558|gb|ADGG01000052.1| GENE 29 43534 - 45081 1055 515 aa, chain + ## HITS:1 COG:no KEGG:Hoch_4770 NR:ns ## KEGG: Hoch_4770 # Name: not_defined # Def: GH3 auxin-responsive promoter # Organism: H.ochraceum # Pathway: not_defined # 35 507 49 547 581 281 33.0 5e-74 MLIKLYLYIIHSIFLLFYKKEYKKYMNSRNILEIQENKLKEILENNKNSLYGKKYNFNKI KTIEDFQREVPLTTYEDYLPYIEKIKNGEEHILTYEKVKMFELTSGSTSASKLIPYTDSL KKEFQAGIKVWLYSLYKKYPSLKFGKSYWSITPKIDFQHKEKSVIPIGFEEDSEYFGNFE KHLIDSIFVNPKDIKNEKDMDRFYFKTLSALVAEENIRLFSFWSPSLLLLLIEYLEKNSE KILKFLKEKRREEVRKYIESKEYHKIWKNLILISCWGDMNSTEYLKKIQELFPKTIIQEK GLLATEGFISFPDAEKNLSKLSFYSHFFEFLSLDDNKIYDTSEIEANKKYELIITTSGGL YRYCIGDIIEVISIENNVPYIKFVGRKGAVSDLFGEKLEESFLKNIMETYKQKIDFYMFA PNKNHYILFIKTDKKIDVKDLENKLRENFHYDYCRKLGQLKAIKVFTLTGQPEKEYIEAC QNKNQKLGNIKMTALSKESGWENIFSGYFQESEDK >gi|292606558|gb|ADGG01000052.1| GENE 30 45078 - 46418 1698 446 aa, chain + ## HITS:1 COG:slr0309 KEGG:ns NR:ns ## COG: slr0309 COG1032 # Protein_GI_number: 16331878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Synechocystis # 20 403 28 414 473 214 32.0 3e-55 MKIAFLAPAGAMHRFNGSFGKSLHYAPLTLTTLAALIPESLNAEAKIYDETIEKIPLDLE ADIIVMTSITGTSQRCYAYADYFRQRGITVVLGGVHPSLMPEEASQHADVVMVGFAEQTF PQMLLDFKNGSLKRMYIQNKEFNLDNKVIPRRELLQKDKYITTATVEVVRGCSLPCTFCA YPTAFGRKIYKRPIKEVLSEIEMFSEKIILFPDVNLIADREYAMRLFKEMKSLNKYWMGL VTSSVGIDENMIKTFADSGCKGLLIGFESITQESQSYINKGINKVADYAELMKKLHDYGI LVQGCFAFGSDEEDTSVFERTVEAVVKAKIDLPRYSILTPFPKTQFYAQLEAENRIFEKN WAMYDVEHCVFTPKKMTVEELEKGTAWAWRETYSMKNIFKRLAPFTHSPWISLPLNIAYR KYADKYEHFTREVMCDNSDIPLIFEK >gi|292606558|gb|ADGG01000052.1| GENE 31 46434 - 47171 615 245 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783751|ref|ZP_06749075.1| ## NR: gi|294783751|ref|ZP_06749075.1| primosomal protein N [Fusobacterium sp. 1_1_41FAA] # 1 245 1 245 245 388 100.0 1e-106 MKIDKIAILNDISSNNINLISFLDTFAKFSQNTKDMAEFMYLNENISQSFFKLTDLKKED LEDILDILKLIKDKSKKEDLDIYGEEVERGINEVNWLIEEKNLYQNIFQEFDNKNILNKN SIVNELYRNEDASQSQYLIKTFSNKLWKELDEETIINFLNGLDFYYLTDEAYFFILPACI RYGLEKFEDNERLDYLTFFLSDKERVKNANEKIKTLVVSYLNLLKELNFSGYFGKEEKEC LELWK >gi|292606558|gb|ADGG01000052.1| GENE 32 47502 - 48971 2300 489 aa, chain - ## HITS:1 COG:FN1547_1 KEGG:ns NR:ns ## COG: FN1547_1 COG1263 # Protein_GI_number: 19704879 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Fusobacterium nucleatum # 1 411 1 411 411 672 91.0 0 MFSYLQKIGKALMVPVAVLPAAAIMLGLGYWIDPTGWGANSQLAAFLIKAGAAVIDNMPI LFAVGVAYGISKDKDGAAALAGLVAFEIVTTLLSKGAVAQIMGIDPEQVHAAFGKVNNQF IGILCGVISGELYNKFHKIELPKFLAFFSGKRFVPIITSVVMIIVSFILTYIWPVIFGAL VSFGTSIAKLGPIGAGIYGFLNRLLIPVGLHHAVNSVFWFNVAGINDIGRFWGAPEMAYA DLPEILQGTYHVGMYQAGFFPIMMFGLLGACLAFIQTSKPENRAKIVSIMVAAGFTSFLT GVTEPIEFAFMFVAPVLYLVHALLTGLALFLAASFNWMAGFSFSGGFIDFFLSLKNPNAQ SPFMLVVLGLVFFVIYYFVFLFVIKAFNLKTPGREESEEEKEEAVRVNTSNAALAESLAT YLGGADNVVEVDNCTTRLRLKVKDSDKIQDSEIKKLVPGLLKPSKEAVQVIIGPHVEFVA TELKRILNK >gi|292606558|gb|ADGG01000052.1| GENE 33 49182 - 49769 754 195 aa, chain + ## HITS:1 COG:FN1907 KEGG:ns NR:ns ## COG: FN1907 COG1739 # Protein_GI_number: 19705212 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 194 1 194 195 307 85.0 9e-84 MEKLKTIKKECSIEFEEKKSKFIASVKPVFSKEEAEEYINYIKSLHPNATHNCSAYKINN KGLEFFKVDDDGEPSGTAGKPMGDIINYMEVTNLVVIATRYFGGIKLGAGGLVRNYAKTA KLGIIEAEIIDFVNKVDLLFEIPYEKLGEIEKLLKDYEAEIIDKSFLEKIVFKVRINEDF FNNLENYPYINLIDS >gi|292606558|gb|ADGG01000052.1| GENE 34 49849 - 50610 930 253 aa, chain + ## HITS:1 COG:FN1990 KEGG:ns NR:ns ## COG: FN1990 COG0484 # Protein_GI_number: 19705286 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Fusobacterium nucleatum # 47 251 2 173 175 125 47.0 6e-29 MDAILLPILVIFFILVMALGIDKASKVILPLSIIGILIYFFGWLVFRYSWLFIPLFVFWF IRKLLNSSNSSSNTYKRDRTQNDDFFNTYRNNGNSSNGTRGNNTYNDTRYYGQFKSREEA EAFFRNIFGRDFGQNGTYNNTRSSGTFTQEEFEEFIRNAFGGSFGGSTYGNSSEGYRQGG NYQRTGTYTSNRSKYYRILGVKDGASQEEIKKAYRQLAKEHHPDKFVNASDSEKKFHENK MKEINEAYENLKI >gi|292606558|gb|ADGG01000052.1| GENE 35 50632 - 51975 1955 447 aa, chain + ## HITS:1 COG:FN1991 KEGG:ns NR:ns ## COG: FN1991 COG1207 # Protein_GI_number: 19705287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Fusobacterium nucleatum # 1 447 1 446 446 750 91.0 0 MKAIIMAAGKGTRMKSDLPKVVHLAHFKPMIIRIIDALNALNTEENVLILGHKKEKVLEV LGPDVSYVVQEEQLGTGHAVKQAVPKLENYQGDVLIINGDIPLIRKETLIDFYNEYKKEN ADAIILSAVFENPFSYGRVLKDGNKVLKIVEEKEANEEQKKIKEINAGVYIFKSQDLVKA LAQINNNNEKGEYYITDVIEILSNENKKVISYSLEDSMEIQGVNSKVELALVSKVLRERK NTALMEEGVILIDPANTYIEDEVKIGRDTTIYPNVTLQGNTEIGENCEILSGTRIIDSKV YDNVRIESSVIEESIVENGVTIGPYAHLRPKSHLKENVHIGNFVETKKSTLEKGVKAGHL TYLGDAHVGEKTNIGAGTITCNYDGKNKFKTEIGKEVFIGSDTMLVAPVSIGDNSLIGAG SVITKDVPSDSLSVERSKQIIKEGWKK >gi|292606558|gb|ADGG01000052.1| GENE 36 51977 - 52927 1367 316 aa, chain + ## HITS:1 COG:FN1992 KEGG:ns NR:ns ## COG: FN1992 COG0462 # Protein_GI_number: 19705288 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Fusobacterium nucleatum # 1 315 1 315 316 562 92.0 1e-160 MINFNNVKIFSGSSNLELATRIAEKIGLQLGKAEIQRFKDGEVYIEIEETVRGRDVFVVQ STSEPVNENLMELLIFVDALRRASAKTINVIIPYYGYARQDRKSKPREPITSKLVANLLT TAGVNRVITMDLHADQIQGFFDIPVDHMQGLPLMAKYFKEKGFYGDDIVVVSPDVGGVKR ARKLAEKLDCKIAIIDKRRPKPNIAEVMNLIGEVEGKIAIFIDDMIDTAGTITNGADAIA ARGAKEVYACCSHAVFSDPAIERLEKSALKEVVVTDSIALPERKKIDKVKIISVDSVFAS AIDRITNNKSVSELFE >gi|292606558|gb|ADGG01000052.1| GENE 37 52927 - 53580 732 217 aa, chain + ## HITS:1 COG:FN1993 KEGG:ns NR:ns ## COG: FN1993 COG0009 # Protein_GI_number: 19705289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Fusobacterium nucleatum # 1 216 1 216 217 325 87.0 3e-89 MEKYLKIDNISDISDDKWTELASELKKGSLIIYPTDTVYGLASIVTNEQSINNIYLAKSR SFTSPLIALLSSVDKVEEVATISDENREILEKLAHAFWPGALTVILKRKEHIPSIMVSGG DTIGVRIPNLDLAIKIIDLAGGILATTSANISGEATPKSYNELSEAIKSRVDILVDGGEC KLGEASTIIDLTSDVPKILRNGAISTDEITKIIGRVR >gi|292606558|gb|ADGG01000052.1| GENE 38 53585 - 54019 474 144 aa, chain + ## HITS:1 COG:no KEGG:FN1994 NR:ns ## KEGG: FN1994 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 144 1 144 144 194 91.0 6e-49 MKGTRVNPTALSPMEMNNMSSMMGMMNSIQKIGKGKRKYTIQLDKNDKKLLVRFINEAKK QFSDTASNSQYAGVYNFLNYITDVASKKESTEIKMSYEEQDFVKRMLQDSVRGMEKMQFF WYQFIRKFTVKTLSKQYRELLKKF >gi|292606558|gb|ADGG01000052.1| GENE 39 54520 - 55233 772 237 aa, chain + ## HITS:1 COG:no KEGG:FN1995 NR:ns ## KEGG: FN1995 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 237 1 237 237 382 91.0 1e-105 MGIRYSKVEGKFQREIVLLKSFPCAYGKCSFCNYIEDNSNNEEEINEVNLEVLKEITGEF GILEVINSGSVFEIPKKTLEKIREVVYEKDIKILYFEIFYSYLSHLDEIINYFNEKKKVE IRFRTGIESFDNDFRRNVYKKNILLDEKKIKELSEKIYSVCLLIATQGQTKEMIKNDIEM GLKYFKAITINIFVDNGTVVKRDAELVKWFVQDMKHLFDNDRVEILIDNKDLGVFEQ >gi|292606558|gb|ADGG01000052.1| GENE 40 55230 - 55937 834 235 aa, chain + ## HITS:1 COG:FN1996 KEGG:ns NR:ns ## COG: FN1996 COG1738 # Protein_GI_number: 19705292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 235 1 235 235 399 92.0 1e-111 MMHNIFLWFLMLVINFSCILFAYRKFGKIGLYIWVPISTILANIQVVILVNLFGMEATLG NILYAGGFLITDILSENYGKKAANTAVKIGFFSLVATTLIMQCAIHFKPLDVPQGLAIFE SVKSIFSLLPRLAIASLIAYLISQFHDVWLYEKIREKFPAKKFIWIRNNGSTMLSQLIDN LVFTTIAFYGVYPVDVMFNIFLSTYIIKFIVAICDTPFIYLADKMFRDKKIPEDV >gi|292606558|gb|ADGG01000052.1| GENE 41 56287 - 57081 1084 264 aa, chain - ## HITS:1 COG:FN1807 KEGG:ns NR:ns ## COG: FN1807 COG5266 # Protein_GI_number: 19705112 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 264 1 264 264 475 90.0 1e-134 MKKSLVLIGSILLAANLFAHDHFLYTSNLDASNQKEVKMKAILAHPAEGPEVEPVSIATV DGKTSLPKAFFVVHDGVKTDLLSKVKVGTIKTAKGQYVALDAIYTAEDGLKGGGSWVFVM DSGNTKDEGYTFNPVEKLIITKDSAGSDYNQRVAPGYNEIVPLVNPVNAWKENVFRAKFV DKDGNPIKNARVDVDFINGKIDMTNNTWTPNKVAPKTSVRVFTDDNGVFAFVPSKSGQWV IRAVSSLDRQNKVVHDASLVVQFE >gi|292606558|gb|ADGG01000052.1| GENE 42 57152 - 57571 690 139 aa, chain - ## HITS:1 COG:no KEGG:FN1808 NR:ns ## KEGG: FN1808 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 15 139 1 125 125 216 90.0 2e-55 MKKFLVLVIGVLMSVVAFAHAPLISVDDNGDGTVYIEGGFSNGTSGEGVEIIIVKDKAYN GPEETFKGKEVIYKGKLDAKGSITMPKPATEKYEVYFNAGEGHVASKKGPALTAGEKANW DKATASFDFGEWKELMLEK >gi|292606558|gb|ADGG01000052.1| GENE 43 57584 - 58462 1243 292 aa, chain - ## HITS:1 COG:FN1809 KEGG:ns NR:ns ## COG: FN1809 COG0803 # Protein_GI_number: 19705114 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 10 292 1 283 283 466 87.0 1e-131 MKKILLFILMLVLGTVSFAENIVITSIQPLYSLTSYLTKGTDIKVYTPFGSETSMTMSKE AIREEGFDLSVAKKAQAVVDIAKVWPEDVIYGKARMNKINIVEIDASYPYDEKMTTIFFS DYSNGNVNPYIWTGSKNLVRMVNIISRDLIRLYPQNKVKIEKNVNKFTNDLLKIENEANE KLLSVDNASVISLSENLQYFLNDMNIYAEYVDYDSITAENIANLVRDKGIKVVISDRWLK KNVIKALKDAGGEFVIINTLDIPMDKDGKMDPEAILKAFKENTDNLIEALKK >gi|292606558|gb|ADGG01000052.1| GENE 44 58464 - 59357 800 297 aa, chain - ## HITS:1 COG:FN1810 KEGG:ns NR:ns ## COG: FN1810 COG1108 # Protein_GI_number: 19705115 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Fusobacterium nucleatum # 1 297 1 297 297 397 91.0 1e-110 MLETFRNFLINLAEQGSIPASFKYGFVINAMICALLIGPILGGIGTMVVTKKMAFFSEAV GHAAMTGIAVGVLLGEPFSAPYISLFTYCILFGLIINYTKNRTKMSSDTLIGVFLAISIA LGGTLLIYVSAKVNSHALESILFGSILTVSDTDIYILVVSAIIIGFVLVPYLNRMLLASF NPNLAIVRGVNVKLIEYIFIIIVTVITIASVKIVGSILVEALLLIPAAAAKNLSKSIKGF VSYSVVFALISCLLGVYLPIHFDISIPSGGAIIMISSAIFIITVIIRMLFRNFAEGE >gi|292606558|gb|ADGG01000052.1| GENE 45 59375 - 60064 234 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 207 7 218 318 94 32 1e-18 MNGLEIQIKDLNLVLSGNEILENINLTVKAGEVHCLVGPNGGGKTSLLRCILGQMPFTGS IEMKYEKDRVIGYVPQVLDFERTLPITVEDFMAMTNQTRPCFLGISKKHKETVDNLLKKL GVYEKKKRLLGNLSGGERQRVLLAQALFPRPNLLILDEPLTGIDKAGEDYFKEIIKELKE EGITILWIHHNLAQVKELADTVTCIKKRMIFSGDPKEELREDKIMRIFE >gi|292606558|gb|ADGG01000052.1| GENE 46 60064 - 60972 1333 302 aa, chain - ## HITS:1 COG:FN1812 KEGG:ns NR:ns ## COG: FN1812 COG0803 # Protein_GI_number: 19705117 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 302 1 302 302 517 92.0 1e-146 MYKKLLAILMLIFSFSVMAKDKLKIGVTLQPYYSFVANTVKDKAEVIPVVRLDKYDSHSY QPKPEDIKRINELDVIVVNGVGHDEFIFDILNAADRKKEIKVIYANKNVSLMPIAGSIRG EKVMNPHTFISITTSIQQVYNIAKELGEIDPANKEFYLKNSRDYAKKLRKLKADALNEVK KLGNIDIRVATLHGGYDYLLSEFGIDVKAVIEPSHGAQPSAADLEKVIKIIKNEKIDIIF GEKNFNNKFVDTIHKETGVEVRSLSHMTNGAYELDGFEKFIKVDLDEVVKAIKDVAAKKG KK >gi|292606558|gb|ADGG01000052.1| GENE 47 60985 - 61899 1166 304 aa, chain - ## HITS:1 COG:FN1813 KEGG:ns NR:ns ## COG: FN1813 COG0803 # Protein_GI_number: 19705118 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 301 1 301 302 466 86.0 1e-131 MKKIILLMFLLLNVLAMAEEKIKIGITLLPYYSFVANIVKDRAEVIPIVKAEGFDSHTYQ PKVEDIERASKVDVIVVNGVGHDEFVYKIIDAVDKKDKPVIINANKDVSLMPVAGTLGNE RIMDSHTFISITAAIQQVHNITKELIKLDPKNKDFYLANSREYVKKLRKLKTDALKEVQD VNGTDVRVATFLGGYNYLLSEFGIDVKAVLEPTHGSQISMSSLQKMIEKIKKEKIDIIFG EKNYSDEYVSIIKNETGIEVRKLEHLTTGAYRADSFEKFIKVDLDEVVSAIKYVKNKNKN RTKK >gi|292606558|gb|ADGG01000052.1| GENE 48 62132 - 62488 173 118 aa, chain - ## HITS:1 COG:no KEGG:FN1814 NR:ns ## KEGG: FN1814 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 115 1 115 192 170 73.0 1e-41 MIKINTYVVKPLSSKKENIFLILAFVVLILLAGIALKIRHRTDYEIDLKENEIISYEVLD NIELGLYSDIKNSLIDIAQIKAENNALPEIEDLVAEEIPPYYKDVTWEQRGAMEWKKN >gi|292606558|gb|ADGG01000052.1| GENE 49 62706 - 63533 1277 275 aa, chain - ## HITS:1 COG:FN1800 KEGG:ns NR:ns ## COG: FN1800 COG0652 # Protein_GI_number: 19705105 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Fusobacterium nucleatum # 1 275 1 274 274 432 82.0 1e-121 MKKLFKLLSIIGLSLMFLVSCSSVKSTMKSVTSVFKNPVKYNNVTATFVTTQGEITFYLY PEAAPITVANFINLAKRGFYNNTKFTRSVENFMVQGGDPTGTGMGGPGYVIPDEFVEWLD FYQPGMLAMANAGPNTGGSQFFMTFAPADWLNGVHTIFGEVRSEGDAIKVRKLEMGDVIK EVRISDNGDFFLGLFKPQVEEWNRALDREYPNLKKYPIRDVTAQEVEAYKEELDNLYTKK EKKNQDTFEYPITKFIRGVFNKVGGYTPKESVISN >gi|292606558|gb|ADGG01000052.1| GENE 50 63591 - 64376 689 261 aa, chain - ## HITS:1 COG:FN1799 KEGG:ns NR:ns ## COG: FN1799 COG1177 # Protein_GI_number: 19705104 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Fusobacterium nucleatum # 1 261 4 264 264 395 91.0 1e-110 MSNKLDRRKTSFVIFVLTMIFFYLPLAVLVIYSFNNGKGMAWQGFSLRWYKELFRHSSNI WKAFYYSIFIALISSFVSTVIGTFGAIALKWFDFKGKKYLKNISVLPLVVPDIIIGVSLL IMFATVKFKLGITTIFIAHTTFNIPYVLFIILSRLDEFDYSVVEAAYDLGATNRQTLTKV IIPMLLPAIVSAFLMALTLSFDDFVITFFVSGPGSSTLPLRIYSMIRLGVSPVVNALSVL LIAISILLTLSTKKLQKNFIK >gi|292606558|gb|ADGG01000052.1| GENE 51 64366 - 65223 594 285 aa, chain - ## HITS:1 COG:FN1798 KEGG:ns NR:ns ## COG: FN1798 COG1176 # Protein_GI_number: 19705103 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Fusobacterium nucleatum # 1 284 1 284 284 462 94.0 1e-130 MKKNSKLGLGYSLPINIWLTLFFLIPILIILSYSFLKRSTYGGVEFKLSFETFNIFVDKV FLTILVNTIYISILITIFTVLIAIPISYYIARSRHKQELLFLIIIPFWTNFLVRIYSWIA LLGNNGFINHFLMKFHLINEPIKMLYNVPAVVVISVYTSLPFAILPLYAVVEKFDFSLLD AARDLGATNFQAFRKVFLPNIKAGIITSTIFTLIPALGSYAVPKLVGGTNSLMLGNVIAQ HLTVTRNWPLASTISGALIVLTSIVLWVFSKYEEKENKVGEKNVK >gi|292606558|gb|ADGG01000052.1| GENE 52 65210 - 66385 1288 391 aa, chain - ## HITS:1 COG:FN1797 KEGG:ns NR:ns ## COG: FN1797 COG3842 # Protein_GI_number: 19705102 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Fusobacterium nucleatum # 18 391 3 376 376 681 93.0 0 MLKYKDNIGIGGKKGIGKKDIKIVNVNKSFDGVQILKDINLTIEQGEFFSIIGPSGCGKT TLLRMIAGFISPDSGAIYLGDENIVDLPPNLRNVNTIFQKYALFPHLNVFENVAFPLRIK KTDEKTINEEVMKYLKLVGLDEHSTKKVSQLSGGQQQRVSIARALINKPGVLLLDEPLSA LDAKLRQNLLIELDLIHDEVGITFIFITHDQQEALSISDRIAVMNAGKILQVGTPAEVYE APADTFVADFLGENNFFSGKVTGIINEELAKIDLEGIGEIIIEQDKKVQIGDRVTVSLRP EKIRLSKNEITKSKNCINSVAVYVDEYIYSGFQSKYYVHLKNNKDLKFKIFLQHAAFFDD NDEKAIWWDEDAYITWDAFDGYLVEVESEKK >gi|292606558|gb|ADGG01000052.1| GENE 53 66612 - 67049 401 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783772|ref|ZP_06749096.1| ## NR: gi|294783772|ref|ZP_06749096.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 145 1 145 145 172 100.0 9e-42 MDKLISLVATLVLLVLYKILEYFHLLKTLQLILVFLMICAFCYGISSIFKIFGLFNNDTT SNNNNDNCKETKKQEEDIEREEQEEDIENSRMSSRSQENLEKALNIPNFRELRISEEKMD KSTLERIKRVKEEYGIKPNEKTEKK >gi|292606558|gb|ADGG01000052.1| GENE 54 67160 - 67711 549 183 aa, chain - ## HITS:1 COG:FN1615 KEGG:ns NR:ns ## COG: FN1615 COG1971 # Protein_GI_number: 19704936 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 183 1 183 183 243 86.0 2e-64 MSTIAVLITALALAMDAMSLSIYQGIASTENQKKQNFIKIILTFGIFQFAMALVGSLSGS LFVHYISLYSKYISFAIFLFLGLMMLKEALKKEEMEYDEKYLDIKTLIIMGVATSLDALL VGLTYSILPFHKVLVYTVEIGIITAIISGLGFVVGNKFGDILGQKSHFLGAALLIFISIN TLI >gi|292606558|gb|ADGG01000052.1| GENE 55 68271 - 68714 363 147 aa, chain + ## HITS:1 COG:no KEGG:FN0145 NR:ns ## KEGG: FN0145 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 142 14 157 162 141 64.0 6e-33 MRKSTKLNFIYILIAIPIYFFSTIFINHFQQYEYIFTDVNNIKKYQVTSNNDASYAYIKL DNNLYTEGEFSAFEIRKVYEDEDYFIAYYFKEKNYIVIDKKLASMKIYNEKEFKEKYRDI NDEKFVDIYNFLKRKGTKIGIHREVLL >gi|292606558|gb|ADGG01000052.1| GENE 56 68711 - 69187 199 158 aa, chain + ## HITS:1 COG:no KEGG:FN0146 NR:ns ## KEGG: FN0146 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 30 151 2 123 128 79 63.0 3e-14 MRFPTAKFTEIAKTSILIILILNFFIIFFEIKYIEYIYLVIFLLLNFLLNIIIIENYKNT YERLKAILKAERTFFIAINILIFFYIFKEPYFFLFKHKILILLGSVIIGYFSLIFIQKIN IKLSLKFFKEIVKIFLISAFIYYLPIASVQLGKFFYIF >gi|292606558|gb|ADGG01000052.1| GENE 57 69231 - 69533 397 100 aa, chain + ## HITS:1 COG:no KEGG:FN0111 NR:ns ## KEGG: FN0111 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 100 1 91 91 105 82.0 7e-22 MKQKERIDKMEKILNNSTKLLEELEEILNKLDEDSKNYNELVKYYYSKNWAKDKEDFEKD LLPDVEAAGVLTEDSIYDMMTTSSGLAIQMLELATKMLKR >gi|292606558|gb|ADGG01000052.1| GENE 58 69775 - 70359 691 194 aa, chain - ## HITS:1 COG:FN2013 KEGG:ns NR:ns ## COG: FN2013 COG0218 # Protein_GI_number: 19705309 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 194 1 194 194 344 97.0 5e-95 MKIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRT QLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLLDIRRVPS DEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFEKEDVFFHSSLTNKG RDEILTFMEEKLNS >gi|292606558|gb|ADGG01000052.1| GENE 59 70374 - 72680 3375 768 aa, chain - ## HITS:1 COG:FN2014 KEGG:ns NR:ns ## COG: FN2014 COG0466 # Protein_GI_number: 19705310 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Fusobacterium nucleatum # 1 768 1 768 768 1337 93.0 0 MAKAPFLPIRDLVIFPNVVTPIYVGRANSIATLEKAIANKTKLVLGLQKDASEENPTFDG DIHEVGVIANIVQIIRMPNNNIKVLVEAESRVKIKDIETEDKEYFATYTVIKETLKDSKE TEAIYRKVFTRFEKYISMIGKFSSELILNLKKIEDYSNGLDIMASNLNISAEKKQEILEI TNVKDRGYKILDDIVAEMEIASLEKTIDEKVKTKMNEAQRAYYLKEKISVMKEELGDFSQ DDDVIEIVDRVKDADIPKEVREKLEAEIKKLTKMQPFSAESSVIRNYIEAVLDLPWNKET KDVLNLKKASQILERDHYGLKDAKEKVLDYLAVKTLNPSMNGAILCLSGPPGIGKTSLVK SIAESMGRKFVRVSLGGVRDEAEIRGHRRTYVGSMPGKIMKAMKEAGTKNPVILLDEIDK MSNDYKGDPASAMLEVLDPEQNKSFEDHYIDMPFDLSKVFFVATANDLRTVSAPLRDRMD ILQLSSYTEFEKLHIAQNFLLKQAQKENGLADVEIKIPDKVMFKLIDEYTREAGVRNLKR EIINICRKIAREVVEKDIKKFNLKASDLEKYLGKAKFRPEKSRKAVGKIGVVNGLAWTAV GGVTLDVQGVDTAGKGDVTLTGTLGNVMKESASVAMTYVKANLEKYPPKDKNFFKDRAIH LHFPEGATPKDGPSAGITITTAIVSVLTNRKVRQDIAMTGEITITGDVLAIGGVREKVIG AHRAGIKEVILPEDNRVDTDEIPDELKSTMKIHFAKTYDDVSKLVFVK >gi|292606558|gb|ADGG01000052.1| GENE 60 72957 - 74249 1795 430 aa, chain - ## HITS:1 COG:FN2015 KEGG:ns NR:ns ## COG: FN2015 COG1219 # Protein_GI_number: 19705311 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Fusobacterium nucleatum # 1 422 1 423 423 744 91.0 0 MSKKVDTCSFCGRSEREVAQLFQGPGDVFICDNCVESCHNLLREDMYSLAREYDMLKDGK SSKKGHKDKIELLKPIEIKAKLDEYVVGQDEAKKVLSVAVYNHYKRILNGGQDEDGVELQ KSNVLLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGDDVENVLVRLIQACNY DIPNAERGIIYIDEFDKIARKSENVSITRDVSGEGVQQALLKIIEGTKSQVPPEGGRKHP NQELIEIDTKNILFIVGGAFEGLEKVIKSRTNKKVIGFGAEVQKQEMAGAEGEFFKKVLP EDLVKQGIIPELVGRLPVITTLDNLDEQTLINILTKPKNAIVKQYQKLCRLEGAKLEFTE EALTEIARRALKRKMGARGLRAIIEHTMLDIMFELPSNNKIKEITITKDAIDNYKEAKIE YKAEEQIITN >gi|292606558|gb|ADGG01000052.1| GENE 61 74260 - 74841 914 193 aa, chain - ## HITS:1 COG:FN2016 KEGG:ns NR:ns ## COG: FN2016 COG0740 # Protein_GI_number: 19705312 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Fusobacterium nucleatum # 1 193 1 193 193 360 96.0 1e-100 MYNPTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDII MYINSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIM IHQPLISGGLKGQATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEE AVRYGLIDSVFRR >gi|292606558|gb|ADGG01000052.1| GENE 62 74951 - 76150 1575 399 aa, chain - ## HITS:1 COG:FN2017 KEGG:ns NR:ns ## COG: FN2017 COG0544 # Protein_GI_number: 19705313 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Fusobacterium nucleatum # 1 399 31 429 429 606 87.0 1e-173 MLKHVGEHAEVAGFRKGHAPKEALMANYKDHIESDVANDAINAHFPEIVEKEKLEPVSYV RLKEIALKDELDLTFDIDVYPEFTLGNYKGLEAEKKTFEMTDDLLNTELEMMQRNHSKLV EVEDASYKAQLEDTVDLAFEGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQ EGEITVKFPEEYHAPELAGKPAQFKVKINAIKQLREPELNDEFAKELGYESLEDLKNKTK EETIKRENDRIENEYVGALLDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDD YLKMMGGNIDTFAAQLAPAAEKKVKVDLILDKIARENKFEASEEELKERMEEVAKMYGMD VPTLEGELKKNNNLDNFKASVKYDIVMKKAIDEVVKNAK >gi|292606558|gb|ADGG01000052.1| GENE 63 76259 - 77923 1596 554 aa, chain - ## HITS:1 COG:FN2018 KEGG:ns NR:ns ## COG: FN2018 COG0608 # Protein_GI_number: 19705314 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Fusobacterium nucleatum # 1 554 3 556 556 880 85.0 0 MLDEKSTEELIKDLLEKRGQESQHQIEKFMNPEYKDFKNPFDFENMEKIVNRIILARENK EKIFIYGDYDVDGISGTAFLTRFFNEIGIDTNYYIPSRNETDYGVSKKSIDYFHKRQGKL VITVDTGYNTIEDVRYAKSLGMEVIVTDHHKTVKEKFDDEILYLNPKLSKSYKFQYLSGA GVAFKLAQGLCMSLGLDMEIIYKYLDIVMIGTIADVVPMIDENRLIIKKGLKIIKNTKVK GLSYLLNYLRLNKKTLTTTDVSYYISPLINSLGRVGISRMGADFFLKEDEFDLYNIIEEM KEQNRQRRTLEKHIYDDAMRKIKNLKLPLDKLSVIFLSSSKWHPGVIGVVSSRLTIKFNV PVILVAIDGNYGKASCRSVGNISIFNLLSNVKHLLERYGGHDLAAGFVVHKEKLNELREY FIRTIPRLKEEDNKAKKDYGKSFDFELSVKDLGEKAFDFMEKMGPFGSNNPHPLFFDSDL KLDNIKRFGVDFRHFNGIIYKDNVSYNAVGFELADEIQEDYINKTYNIVYYPEKIILNNE EVTQIILKSIKENK >gi|292606558|gb|ADGG01000052.1| GENE 64 77931 - 78293 522 120 aa, chain - ## HITS:1 COG:FN2019 KEGG:ns NR:ns ## COG: FN2019 COG0858 # Protein_GI_number: 19705315 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Fusobacterium nucleatum # 1 119 1 119 120 179 93.0 1e-45 MKKQRLEGIGKEMMRVISKVLLEEVKNPKIKGLVSVTEVNVTEDLKFADTYFSILPPLND EEKQYDHEEILEALNEIKGFLRKRVAEEVDIRFTPEIRVKLDNSMENAMKITKLLNDLKA >gi|292606558|gb|ADGG01000052.1| GENE 65 78308 - 80509 3212 733 aa, chain - ## HITS:1 COG:FN2020 KEGG:ns NR:ns ## COG: FN2020 COG0532 # Protein_GI_number: 19705316 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Fusobacterium nucleatum # 1 733 1 737 737 1145 92.0 0 MKVRVHELAKKYELKNKEFLEILKKDIGVSVTSHLSNLDEDQVKKIDDYFAKMNMLKVET VEPVKMYKEKKEEKPIRKIIDEEDEVEEGQKNNKKPKIQQKTKKNNNITFDEDGNSHKNK SKKKKGRRTDFVLKTVEATPDVVEEDGIKIIKFRGELTLGDFAEKLGVNSGEIIKKLFLK GQMLTINSPITLEMAEELAGEYDALVEEEQEVELDFGEKFALEIEDREADLKERPPVITI MGHVDHGKTSLLDAIRTTNVVEGEAGGITQKIGAYQVVKDGKRITFIDTPGHEAFTDMRA RGAQVTDIAILVVAADDGVMPQTVEAISHAKVAKVPIIVAVNKIDKPEANPMKVKQELME HGIVSVEWGGDVEFVEVSAKKKINLDGLLDTILITSEILELKGNVKKRAKGVVLESRLDP KIGPIADILVQEGTLKIGDVIVAGEVQGKVKALLNDKGERVNTAIVSQPVEVIGFNNVPD AGDTMYVIQNEQHAKRIVEEVRKERKIQETTKKTISLESLSDQLKHEDLKELNLILRADS KGSVDALRDSLLKLSNDEVAVNIIQAASGAITESDIKLAEAAGAIIIGFNVRPTTKALKE AETNKVEIRTSGIIYHIIEDIEKALAGMLDPEFKEEYQGRIEIKKVFKVSKVGNVAGCVV IDGKVKNDSNIRILRDNVVIYEGKLASLKRFKDDAKEVVAGQECGLGVENFNDIKDGDVV EAFEMVEIKRTLK >gi|292606558|gb|ADGG01000052.1| GENE 66 80523 - 81053 815 176 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237742963|ref|ZP_04573444.1| ribosomal protein L7Ae [Fusobacterium sp. 4_1_13] # 1 176 1 176 176 318 86 6e-86 MSNTHIPERTCVLCRAKKDKSKLFRLAKVKEGFYEFDKEQKKQTRAVYVCKSLTCLGRLA KHNKVKLDSQDLMAMLSIINKANKNYLNILNSMKNSGELVFGINLLFENIEHIHFIVLAQ DISKKNEEKILRRISELKIPYVTAGTMEELGKIFNKEEITVIGIKDKKMARGLIED >gi|292606558|gb|ADGG01000052.1| GENE 67 81046 - 82107 637 353 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 10 353 11 350 537 249 40 3e-65 MKAKDSKIFLEALDELEKEKGISKESVLEAIELALLAAYKKNYGEDENVEVIVDRESGEI KVLASKTVVDADDLLDPNEEISLEDAKEIKKRVKIGDVLKFEVSCDNFRRNAVQNGKQIV IQKVREAEREHIYEKFKERENDIVSGIIRRIDNKKNIFIEIDGIELILPPAEQSYSDIYR VGERIKVFVYNVEKTNKFPKILISRKNEGLLKKLFEIEIPEISAGIIEIKSVAREAGSRA KVAVYSQVPNIDTVGACIGQKGTRIKNIVDELNGERIDIVEWKESMEQFVSAVLSPAVVS SVEILEDGTAKVLVEPSQLSLAIGKNGQNARLAARLTGTRVDIKVLEKEEDDE >gi|292606558|gb|ADGG01000052.1| GENE 68 82134 - 82607 484 157 aa, chain - ## HITS:1 COG:FN2023 KEGG:ns NR:ns ## COG: FN2023 COG0779 # Protein_GI_number: 19705319 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 2 157 1 156 156 235 87.0 2e-62 MMEDNSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRIFIENLNGELSIEDCSKL SSKIEDKVEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQFKAV IKEVKGDNIVFLIDKKEVEIEFKEIRKANILFEFNDF >gi|292606558|gb|ADGG01000052.1| GENE 69 82728 - 83816 1391 362 aa, chain - ## HITS:1 COG:FN1980 KEGG:ns NR:ns ## COG: FN1980 COG5438 # Protein_GI_number: 19705276 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Fusobacterium nucleatum # 1 362 1 369 369 508 78.0 1e-144 MKKFFVLIIFLLSSVLIFAEGTKEEYLSGKIIELVSEEKSDEEGIAKLQKFNVKLLEGDN KGEVVEIDFPIYTAKEYNIDVKVGDRVVVFKTFDDYGNDEMQMQYYISDVDKRMEIYIMG IIFVALVLVIARKNGLKALFALIVTVAFIVKIFIPAVFNGYSPILFAVITAIFSSLVTIY YTVGMNKKFFVSLFGVIGGVLVAGILSYIFTYRMRLNGYLDPELLASASILKNINLKEVI PAGVIIGSLGAVMDVAVSIASSINELHETDPNMSQKAMFKSVINIGTDIIGTMINTLILA YIASSVFTLLLVYAQAGEYPIIRLLNFQDIAVEIMRSVCGSIGILISVPLTAYIGTLIYK QK >gi|292606558|gb|ADGG01000052.1| GENE 70 84124 - 84381 422 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19705275|ref|NP_602770.1| SSU ribosomal protein S15P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 85 1 85 85 167 100 2e-40 MRTKAEIIKEFGKSEADTGSTEVQIALLTEKINHLTEHLRVHKKDFHSRLGLLKMVGQRK RLLAYLTKKDLEGYRALIAKLGIRK >gi|292606558|gb|ADGG01000052.1| GENE 71 84493 - 86673 1321 726 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 107 721 13 594 636 513 45 1e-144 MKDNQFEDEDLKNDSQIPENQENKINEEEKINEEVKQEEEKKEDKKEEEPKQEEPKPEEN SEKEEEKQENKQEEDKKEEKRYNRREEEKKKVIGKAVRVNFNLKGLLMLVFIITLFAVAP KIMEEGKTQDYVDISYSDFIKNIESKKIGVVEEKDGYVYGYKANEVKYLDNKSNNSLKSK LGFDNKTGVQGLKARLITNRLGEDSNLVAVIKENGALIQSTEPPQPSLLLSIVLSLLPYV IMIGLLVFMMNRMGKGSGGGGPQIFNMGKSKAKENGEDISDVTFADVAGIDEAKQELKEV VDFLKEPEKFKKIGAKIPKGVLLLGEPGTGKTLLAKAVAGEAKVPFFSMSGSEFVEMFVG VGASRVRDLFGKARKNAPCIVFIDEIDAVGRKRGTGQGGGNDEREQTLNQLLVEMDGFGT DETIIVLAATNRADVLDKALKRPGRFDRQVIVDMPDVKGREEILKVHAKNKKFSSDVDFK IIAKKTAGMAGADLANILNEGAILAARAGRSEITMADLEEASEKVQMGPEKRSRVVSDTD KKIVAYHESGHAIVNFVVGGEDKVHKITMIPRGQAGGYTLSLPAEQKLVYSKKYFMDEIA IFFGGRAAEEIVFGKDNITSGASNDIQVATGMVQQMVTKLGMSEKFGPVLLDGTREGDMF QSKYYSEQTGKEIDDEIRSIINERYQKALSILNENRDKLEEVTRILLEKETIMGDEFEAI MKNEHI >gi|292606558|gb|ADGG01000052.1| GENE 72 86663 - 88021 1106 452 aa, chain - ## HITS:1 COG:FN1977 KEGG:ns NR:ns ## COG: FN1977 COG0037 # Protein_GI_number: 19705273 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 1 448 1 447 448 567 79.0 1e-161 MELFREILKLNEKYNLIENNDTIVVGFSGGPDSVFLVEMLKKLQNFFKFKIYLVHINHLL RGEDADADESFSYDYAKRNNLEIFVKRIPVKEIAKKTGKTLEEVGREERYNFFSEIYNKV GANKIATAHNKDDQIETFLFRLVRGTSLQGLEGIKLKYSNIIRPISEIYKKDILEYLNKN EIQYKIDKTNFENEFTRNSIRLDLIPFIEKRYNIKFKDKLFSLIEEIRENNKKNFLDLDE YVDEENRLTLEKIKTLSLFERKNLLVHFLNKKNIKINRNKIDEINSLIKSDGTKKIDLDL NFRIVKDYHHLYIEKKEEETVSCLNEILQLKIPSETYFDKYKIKVEFVENKEKTKYKNQY LLYAMNNDIIEIRYRKEGDRILLDENHSKKLKEVLINQKVPRDVRDRIPIFLYKNNIFWI YGIKKAYIPKENKNTSELRQVLITVEEVMNER >gi|292606558|gb|ADGG01000052.1| GENE 73 88257 - 89192 996 311 aa, chain - ## HITS:1 COG:FN1976 KEGG:ns NR:ns ## COG: FN1976 COG1559 # Protein_GI_number: 19705272 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Fusobacterium nucleatum # 17 309 17 309 310 489 89.0 1e-138 MKKLLAIVSIVIIILAGTTAYQLSKKDKYNLVLEIDKDKPLKESLSTLPVSNNPFFKLYL KFRNSGRNIKAGSYELRGKYNIIELISMLESGKSKVFKFTIIEGSTVKNVIDKLVANGKG TRENYIKAFKEIDFPYPTPEGNFEGYLYPETYFIPESYDEKAVLNIFLKEFLKRFPVEKY TDKEEFYQKLIMASILEREAALDSEKPLMASVFYNRIAKNMTLSADSTVNFVFNYEKKRI YYKDLEVQSPYNTYKNKGLPPGPICNPTVSSVDAAYNPADTEFLFFVTKGGGAHFFSKTY KEHLDFQKNNK >gi|292606558|gb|ADGG01000052.1| GENE 74 89202 - 89858 719 218 aa, chain - ## HITS:1 COG:HI0977 KEGG:ns NR:ns ## COG: HI0977 COG2184 # Protein_GI_number: 16272915 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Haemophilus influenzae # 21 195 12 186 191 174 51.0 1e-43 MNKYNFTETDKTILKRLVDEKEEEYLSKKRAKDLFEKDILLKDDLGTFKSLQAIHKYLFQ DCFETAGLVRKHDIRKGDTLFCKAMYLEDNLKTVSNMKEDTFEDIIEKYVEMNIMHPFYE GNGRATRIWLDFLLIKRLGKCIDWKKIDKEDYLSAMKRSIINSLELKTLLKDNLTDDINN RDLYMSNINQSYHYENMTNYDANNLDEETELKEKYSKK >gi|292606558|gb|ADGG01000052.1| GENE 75 89874 - 91463 2213 529 aa, chain - ## HITS:1 COG:FN1975 KEGG:ns NR:ns ## COG: FN1975 COG0513 # Protein_GI_number: 19705271 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Fusobacterium nucleatum # 1 529 1 528 528 913 94.0 0 MEQLEKLKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKT AAFSLPIIENFETSDHHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVIPVYGGQSIDIQ RKLIKTGVDVVVGTPGRVIDLIERKLLKLNSLKYFVLDEADEMLNMGFIEDIEKILTFTN DDKRMLFFSATMPPEIMKIAKTHMKEYEVLAVKSRELTTDLTEQIYFEVNERDKFEALCR IIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYREVTLKRFKTKKINI LVATDVAARGIDINDLSHVINYAVPQEVESYVHRIGRTGRAGKEGTAITFITPQEYRRLL QIQKAVKKEIRKESLPDVKDVIQAKKFRIIDDIGQILIDNDYDKFKKLAKDLLNMEEAEN IVASLLKLTYSDVLDESNYNEISPVKMEDTGKTRLFIAMGRKDGMTPKKLVDFIVKKAKV KQAYIKNAEVYDAFSFVSVAFKEAEIIVEAFAEIRKGKKPLIEKAKSKK Prediction of potential genes in microbial genomes Time: Thu May 19 22:34:22 2011 Seq name: gi|292606557|gb|ADGG01000053.1| Fusobacterium sp. 1_1_41FAA cont1.53, whole genome shotgun sequence Length of sequence - 1885 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 160 - 1629 99.0 # FJ471670 [D:1..1475] # 16S ribosomal RNA # Fusobacterium periodonticum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + TRNA 1721 - 1797 96.8 # Ile GAT 0 0 + TRNA 1801 - 1877 89.3 # Ala TGC 0 0 Predicted protein(s) Prediction of potential genes in microbial genomes Time: Thu May 19 22:34:24 2011 Seq name: gi|292606556|gb|ADGG01000054.1| Fusobacterium sp. 1_1_41FAA cont1.54, whole genome shotgun sequence Length of sequence - 3569 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 2 - 98 93.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. 1 1 Tu 1 . - CDS 2 - 212 237 ## BMULJ_05097 hypothetical protein - Prom 326 - 385 9.3 2 2 Tu 1 . + CDS 150 - 350 98 ## + 5S_RRNA 159 - 221 92.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 317 - 355 2.1 3 3 Tu 1 . - CDS 553 - 768 233 ## + LSU_RRNA 789 - 1913 91.0 # FJ410389 [D:301..3086] # 23S ribosomal RNA # Fusobacterium necrophorum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + LSU_RRNA 1947 - 3155 95.0 # FJ410389 [D:301..3086] # 23S ribosomal RNA # Fusobacterium necrophorum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + 5S_RRNA 3354 - 3469 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + TRNA 3478 - 3553 84.2 # Asn GTT 0 0 Predicted protein(s) >gi|292606556|gb|ADGG01000054.1| GENE 1 2 - 212 237 70 aa, chain - ## HITS:1 COG:no KEGG:BMULJ_05097 NR:ns ## KEGG: BMULJ_05097 # Name: not_defined # Def: hypothetical protein # Organism: B.multivorans_T # Pathway: not_defined # 1 56 1 56 63 81 73.0 7e-15 MIHPHVPVRIPCYDFTPIANHTLGASLLAVRPATSGATNSRGVTGGVYKTRERIHRDIAD SRLLAIPTSC >gi|292606556|gb|ADGG01000054.1| GENE 2 150 - 350 98 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISDWGEVVTRYPYGNVRMDHLLSKEYMSFSILLVMFFSAMLLRLLLNIGNYIVEQTRKK LTLTIS >gi|292606556|gb|ADGG01000054.1| GENE 3 553 - 768 233 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRTFTFYGSPFQTIPIHQYTILNILQFFTTLSLNPLNTTAVSLTYLRFRLDPFRSPLLW VSFLLSFPRVT Prediction of potential genes in microbial genomes Time: Thu May 19 22:34:45 2011 Seq name: gi|292606555|gb|ADGG01000055.1| Fusobacterium sp. 1_1_41FAA cont1.55, whole genome shotgun sequence Length of sequence - 35377 bp Number of predicted genes - 39, with homology - 39 Number of transcription units - 20, operones - 12 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 92 - 147 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + Prom 302 - 361 19.1 1 1 Tu 1 . + CDS 450 - 722 501 ## COG2388 Predicted acetyltransferase + Term 730 - 778 6.5 2 2 Op 1 6/0.000 - CDS 791 - 1327 513 ## COG1045 Serine acetyltransferase 3 2 Op 2 . - CDS 1362 - 2276 804 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 2321 - 2380 18.0 + Prom 2656 - 2715 12.1 4 3 Op 1 . + CDS 2748 - 3992 1295 ## ZPR_3215 hypothetical protein 5 3 Op 2 . + CDS 4004 - 4732 841 ## COG0206 Cell division GTPase + Term 4736 - 4783 3.4 - Term 4724 - 4770 5.2 6 4 Op 1 15/0.000 - CDS 4798 - 5997 1822 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 4 Op 2 . - CDS 6007 - 6477 524 ## COG0307 Riboflavin synthase alpha chain 8 4 Op 3 16/0.000 - CDS 6575 - 6826 211 ## COG0307 Riboflavin synthase alpha chain 9 4 Op 4 6/0.000 - CDS 6854 - 7963 1484 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 10 4 Op 5 . - CDS 7966 - 8427 798 ## COG0054 Riboflavin synthase beta-chain - Prom 8457 - 8516 7.6 + Prom 8734 - 8793 17.4 11 5 Op 1 38/0.000 + CDS 8829 - 10433 2249 ## COG0747 ABC-type dipeptide transport system, periplasmic component 12 5 Op 2 49/0.000 + CDS 10448 - 11377 818 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 13 5 Op 3 44/0.000 + CDS 11370 - 12173 689 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 14 5 Op 4 17/0.000 + CDS 12170 - 12952 264 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 15 5 Op 5 . + CDS 12953 - 13654 356 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 13656 - 13692 3.1 16 6 Tu 1 . - CDS 13678 - 14037 325 ## COG1733 Predicted transcriptional regulators - Prom 14137 - 14196 13.7 + Prom 14109 - 14168 11.9 17 7 Tu 1 . + CDS 14224 - 16653 3102 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 16663 - 16712 6.4 - Term 16651 - 16700 6.4 18 8 Tu 1 . - CDS 16709 - 17608 1137 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 17636 - 17695 8.0 - Term 17899 - 17938 -0.3 19 9 Op 1 . - CDS 18129 - 18434 214 ## Lebu_1174 hypothetical protein 20 9 Op 2 . - CDS 18473 - 19015 708 ## gi|294783814|ref|ZP_06749136.1| conserved hypothetical protein - Prom 19108 - 19167 5.2 - Term 19114 - 19155 1.3 21 10 Op 1 . - CDS 19173 - 19592 461 ## gi|294783815|ref|ZP_06749137.1| conserved hypothetical protein - Prom 19734 - 19793 5.0 22 10 Op 2 . - CDS 19810 - 20148 448 ## gi|294783816|ref|ZP_06749138.1| hypothetical protein HMPREF0400_01813 - Prom 20243 - 20302 10.6 23 11 Tu 1 . - CDS 20486 - 21319 966 ## gi|294783817|ref|ZP_06749139.1| hypothetical protein HMPREF0400_01814 - Prom 21476 - 21535 5.0 - Term 21483 - 21524 2.6 24 12 Op 1 . - CDS 21566 - 21868 450 ## gi|294783818|ref|ZP_06749140.1| conserved hypothetical protein 25 12 Op 2 . - CDS 21924 - 22124 305 ## gi|294783819|ref|ZP_06749141.1| hypothetical protein HMPREF0400_01816 - Prom 22150 - 22209 3.5 26 13 Op 1 . - CDS 22213 - 22431 363 ## gi|256027144|ref|ZP_05440978.1| hemolysin 27 13 Op 2 . - CDS 22436 - 22645 83 ## COG3210 Large exoproteins involved in heme utilization or adhesion 28 13 Op 3 . - CDS 22635 - 22994 377 ## gi|294783822|ref|ZP_06749144.1| conserved hypothetical protein - Prom 23174 - 23233 5.5 - Term 23172 - 23237 4.5 29 14 Tu 1 . - CDS 23241 - 23636 628 ## gi|294783823|ref|ZP_06749145.1| conserved hypothetical protein - Prom 23827 - 23886 9.5 - Term 23835 - 23881 7.1 30 15 Op 1 . - CDS 23895 - 24422 435 ## FN0142 hypothetical protein - Prom 24453 - 24512 6.3 - Term 24531 - 24575 6.2 31 15 Op 2 . - CDS 24584 - 26200 2258 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 26278 - 26337 14.2 + Prom 26231 - 26290 12.3 32 16 Tu 1 . + CDS 26316 - 26771 720 ## FN1825 hypothetical protein - Term 26760 - 26811 12.1 33 17 Op 1 2/0.167 - CDS 26858 - 28270 795 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 34 17 Op 2 . - CDS 28311 - 29225 1257 ## COG2066 Glutaminase - Prom 29297 - 29356 12.5 + Prom 29387 - 29446 11.9 35 18 Tu 1 . + CDS 29468 - 29767 475 ## FN1395 hypothetical protein + Term 29775 - 29809 5.3 - Term 29757 - 29801 10.0 36 19 Op 1 2/0.167 - CDS 29811 - 31028 1875 ## COG0426 Uncharacterized flavoproteins 37 19 Op 2 . - CDS 31054 - 32964 2719 ## COG1960 Acyl-CoA dehydrogenases - Prom 33007 - 33066 15.6 - Term 33286 - 33320 3.9 38 20 Op 1 1/0.667 - CDS 33446 - 34186 652 ## COG0101 Pseudouridylate synthase 39 20 Op 2 . - CDS 34200 - 35276 1118 ## COG2404 Predicted phosphohydrolase (DHH superfamily) - Prom 35305 - 35364 19.9 Predicted protein(s) >gi|292606555|gb|ADGG01000055.1| GENE 1 450 - 722 501 90 aa, chain + ## HITS:1 COG:FN1391 KEGG:ns NR:ns ## COG: FN1391 COG2388 # Protein_GI_number: 19704723 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Fusobacterium nucleatum # 3 90 2 89 89 142 87.0 1e-34 MNDIVHYEGNGFYIYDDNKEILARLEYKRNGNTLIFDHTVVSDKLKGQGIAGKLLDVAVD YARKNNFKVHPVCSYVVKKFESGNYDDIKI >gi|292606555|gb|ADGG01000055.1| GENE 2 791 - 1327 513 178 aa, chain - ## HITS:1 COG:BS_cysE KEGG:ns NR:ns ## COG: BS_cysE COG1045 # Protein_GI_number: 16077161 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus subtilis # 4 177 3 171 217 202 54.0 3e-52 MNIFKWLKDEFLNIQEKDPAVKSKLEIILYASFHAVLYHKLAHFLYKCKLYFLARLISQI ARFLTGIEIHPGATLGRRVFFDHGMGIVIGETAIVGDDCVIFHGVTLGGLSSKRPNQTNS SKRHPTIKNNVMLGAGAKLLGDITIGENVKVGANAVVLTDVPDNAIAVGIPARIIVKE >gi|292606555|gb|ADGG01000055.1| GENE 3 1362 - 2276 804 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 2 297 3 300 308 314 55 5e-85 MIYNNLLDLIGNTPVVKVNFKDENIADVYVKLEKFNLSGSVKDRAALGMIEAAERDGLLK EDSVIIEPTSGNTGIALSLIGRLKGYKVVIVMPDTMSIERRSTLKAYGAELILTDGSKGI GEAIAVAEKLVAENPNYFMPQQFNNKANPEKHYETTGKEILDDFKVVDAFVAGVGTGGTL VGIGKRLKERSKDTKVIGVEPSTSAVLSGEAPGKHSIQGIGTGFVPENYDATVVDEVIKI SSEEALEFAKKASHDFGLFVGISSGANIAAAYHVAKKLGKGKTVVTIAPDGGEKYLSIEA FLTK >gi|292606555|gb|ADGG01000055.1| GENE 4 2748 - 3992 1295 414 aa, chain + ## HITS:1 COG:no KEGG:ZPR_3215 NR:ns ## KEGG: ZPR_3215 # Name: not_defined # Def: hypothetical protein # Organism: Z.profunda # Pathway: not_defined # 18 269 15 278 414 65 26.0 5e-09 MGENIEFDEKDIKKAQKLLKITKPFEKEYLLKDSPRLNILNIIEMDTKEASAHAKILEFL MDCKWETNEKETLFTSFLEKVLGFSKTKIKEFLKEKIYISREHVIKNGRIDFVIESKSLC IAIEMKIYASDGDRQIERYENYCKSRGKDYKIFYLTLDGHEPSEVSINSEVKCISFEDNI LPWLEESLNYLKKEKYKYSFILQYIGAIKNLIEIEEANMEILNTFEEMKTTKFLNDRFKE KIQSIIVEFIEGIDKNIEKKLKDKEILKEDSFCYSRTYNFFNGTGVAGSCYRLDKIKNKD NNLDYYLIFSIEVTNDIRGSFQISPYTDDKGYTPIKLEDMEKIDSKFFNKYSEKFNNLKL LKGLNNDQYGVWFHIKEIDFRNFSDSALELVEKDIMKNEIKEITKNIWNIIKDF >gi|292606555|gb|ADGG01000055.1| GENE 5 4004 - 4732 841 242 aa, chain + ## HITS:1 COG:FN1451 KEGG:ns NR:ns ## COG: FN1451 COG0206 # Protein_GI_number: 19704783 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Fusobacterium nucleatum # 86 241 159 315 360 69 31.0 6e-12 MQEKLKVITIGDYSISILKNYFKDNENIDFLKLDLDESIENLNTNFSKRDIVFLRTNTEN LEKLLEVGKTLKEKEIVTTTILEEKIVMENRKVLEETIDAIFPVTKKDDINNLLLELIKM IENIIYGVCFINLDVEDVKYMLKDSGISVFGSLNINKTISKEDIIKNIIYPFYSKTLKDS KKFLIFLDTLEGFVLTEGELIIDTLRNESGKTIEDILFSVRMGNNLKNRIGCSFIAGVFK EE >gi|292606555|gb|ADGG01000055.1| GENE 6 4798 - 5997 1822 399 aa, chain - ## HITS:1 COG:FN1508_1 KEGG:ns NR:ns ## COG: FN1508_1 COG0108 # Protein_GI_number: 19704840 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Fusobacterium nucleatum # 1 203 1 203 203 374 93.0 1e-103 MIYKIEDVLEDIKNGIPLIIVDDENRENEGDLFVAAEKATYESINLMATYARGLTCTPMS SEYAVRLNLDPMTARNTDAKCTAFTVSVDAKEGTTTGISIADRLTTIKKLADINSVATDF TRPGHIFPLIAKDNGVLEREGHTEATVDLCKICGLAPVSVICEILKDDGTMARMDDLEVF AKEHNLKIITIADLIKYRKKTQELMKVEVVANMPTDNGTFKIVGFENHIDGKEHIALVKG DVAGKEGVTVRIHSECFTGDILGSLRCDCGSQLKTAMRRIDRLGEGVILYLRQEGRGIGL LNKLRAYNLQEEGMDTLDANLHLGFGADMRDYAVAAQMLKALGVKSIKLLTNNPLKINGL EEYGMPVVEREEIEIEHNKVNKVYLKTKKERMGHLLKIK >gi|292606555|gb|ADGG01000055.1| GENE 7 6007 - 6477 524 156 aa, chain - ## HITS:1 COG:FN1507 KEGG:ns NR:ns ## COG: FN1507 COG0307 # Protein_GI_number: 19704839 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Fusobacterium nucleatum # 1 156 96 251 251 278 96.0 2e-75 MFETISRSNLKRLKAGDEVNLEKSITLSTPLGGHLVTGDVDCEGEIVSITQEGIAKIYEI KISRKYMRYIVEKGRATIDGASLTVISLTDDTFSVSLIPHTQEKIILGSKKVGDIVNIET DLVGKYIERFVHFDKLEEKENKKSKISREFLLENGF >gi|292606555|gb|ADGG01000055.1| GENE 8 6575 - 6826 211 83 aa, chain - ## HITS:1 COG:FN1507 KEGG:ns NR:ns ## COG: FN1507 COG0307 # Protein_GI_number: 19704839 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Fusobacterium nucleatum # 24 82 3 61 251 93 84.0 9e-20 MEILDKKSNRMSRVIVGVSERSEFLKLQRILDFLSLRNLLSNELFLMVNKVRWYMFTGLV EEKGSVISLNSGDKSIKLKNKSK >gi|292606555|gb|ADGG01000055.1| GENE 9 6854 - 7963 1484 369 aa, chain - ## HITS:1 COG:FN1506_2 KEGG:ns NR:ns ## COG: FN1506_2 COG1985 # Protein_GI_number: 19704838 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Fusobacterium nucleatum # 147 369 1 223 223 380 86.0 1e-105 MDKTVDEKFMARAIELAFRGLGGVNPNPLVGAVVVKDGKIIGEGWHKKYGGPHAEVWALN EAGEEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACVDPNPLVAGKGIKIIED AGIKVDFGILEKEAKEVNKVFLKYIENKIPYLFLKCGITLDGKIATRSGKSKWITNELAR EKVQFLRTKFSAIMVGINTVLKDNPSLDSRLDEEKFGIEKRNPFRVVVDPNLESPIDSKF LHFNDNKAIIVTSNDNRNLEKVKEYENLGTRLIYLEGKIFKMEDILKELGKLNIDSVLLE GGSGLISTAFKENVIDAGEIFIAPKIIGDNSSIPFISGFNFNSMEEVFKLSNPKFNIYGD NISIEFENL >gi|292606555|gb|ADGG01000055.1| GENE 10 7966 - 8427 798 153 aa, chain - ## HITS:1 COG:FN1505 KEGG:ns NR:ns ## COG: FN1505 COG0054 # Protein_GI_number: 19704837 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Fusobacterium nucleatum # 1 153 5 157 157 271 93.0 3e-73 MRVFEGKFNGEGIKIAIVAARFNEFITSKLIGGAEDILRRHNVEDDNINLFWVPGAFEIP LIAQKLAKSKKYDAVITLGAVIKGSTPHFDYVCAEVSKGVAHVSLESEIPVIFGVLTTNS IEEAIERAGTKAGNKGADAAMTAIEMINLIKGI >gi|292606555|gb|ADGG01000055.1| GENE 11 8829 - 10433 2249 534 aa, chain + ## HITS:1 COG:FN1504 KEGG:ns NR:ns ## COG: FN1504 COG0747 # Protein_GI_number: 19704836 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 14 534 2 522 522 996 94.0 0 MKRLSKLFLMLVFSLLFLVACGEKAKEEVKTEGTEKKTLTISWNEDIGFLNPHAYLPDQF ITQGMVYEGLVNYGENGEILPSLAESWEISEDGKTYTFHLRKGVKFSDGSDFNANNVKKN FDSIFLNKERHSWFGLTDHIKSYRAVDENTFELILDEAYTPTLYDLAMIRPIRFLADAGF PDDGDTYKGIKASIGTGPWILKEHKKDEYAIFEKNPNYWGEKPLLDEVIIKIIPDAETRA LQFEAGELDMIYGNGLISYDTFKSYQGDSKYQTAISEPMSTRLLMFNTTSGVLNDINLRY ALTYATDKKAISEGILNGIEKPADTIFAPNMPHSKQDLKPFEYNLDKAKEYIEKAGYKMG KEFYEKDGQVLTLVFPYIATKTLDKQIAEYIQGQWKKIGVNVEIKALEEKNFWEETDDLK YNVMLNYSWGAPWDPHAYINAMATVAENGNPDYEAQLGLPMKKELDAKIHQVLVESDPQK VEQLYKEILTTLHEQAVYVPLTYQSLIAVYRDNLTGVRFMPQEYELPLSFIDKK >gi|292606555|gb|ADGG01000055.1| GENE 12 10448 - 11377 818 309 aa, chain + ## HITS:1 COG:FN1503 KEGG:ns NR:ns ## COG: FN1503 COG0601 # Protein_GI_number: 19704835 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 309 4 312 312 519 95.0 1e-147 MKKKIFDIISALFVISILAFIFIQLTPGDPAENYLRASHLPITDELLKQKREELGLNSPL IIQYLKWLKNVLLGNFGSSFLRKEPAIYLTFKALYATFQLTIFSTFLIILISLPIGILTA IKTGTWIDKLIISITTIFVSMPVFWLGFSLILLFSVKLNWLPVSGRGGFLNFILPSITLA VPFIGQYIEFVKKSILENIQNNLLENAILRGLKKRYIIFNYLLKGAWIPILSGFSFTFVS ILTGSILVEEIFSWPGIGFLFTKAIQAGDVPLIQACIMVFGLLFIIATHFMNSILKYLDP RIKGEKNNG >gi|292606555|gb|ADGG01000055.1| GENE 13 11370 - 12173 689 267 aa, chain + ## HITS:1 COG:FN1502 KEGG:ns NR:ns ## COG: FN1502 COG1173 # Protein_GI_number: 19704834 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 267 5 271 271 429 93.0 1e-120 MAKNIKFYFAIFLLFFWIALAIFAPMIAPYDPQYVDLSLKLLPPNKTYILGTDALGRDIF SRIIYGARLSISISLSIQVILLLVSVPIGLFIGWKQGKEEKFFDWLTMIFSTFPSFLLAM VFVGMLGAGISNMIISVVAVEWIYYARILKNSVISQKQNEYVKYAILKGMPTKYILKKHI FPFVYGPILTASLMNIGSIILMISSFSFLGIGVQPNISEWGNMIHDSRTFFRNHPNLMIY PGMMILFAVGSFRFIASQIEEKFRGIK >gi|292606555|gb|ADGG01000055.1| GENE 14 12170 - 12952 264 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 228 31 242 329 106 31 2e-22 MNILEIKNLSLKISDKKILDNINFTLKEKEIISIIGQSGSGKTMLSKMIMGLKNKNMQVE GEILFKDKNIFDFSEEDLRKYRGEGIGYITQNPLNVFLPFQKIKTTFLETYLSHKNISKK EFIELAKKNLKQVNLDNADEILNKYPFELSGGMLQRVMIALIVGLDSKIIIADEVTSALD SYNRHEIIKIFKELNNIGKSIILITHDYYLMKAISDRCLVMENGEIIEEFNPKLKSELIK ESSDFDAKLLETTIYKRKGS >gi|292606555|gb|ADGG01000055.1| GENE 15 12953 - 13654 356 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 11 208 30 242 329 141 36 5e-33 MKAVELINIVKKYGQQEVLNSFSLDIEKGKCLAVMGESGSGKSTIAKIIIGLEKPNSGEV KIFDKDIEFLFQDSYNALNPRMTVEDLIYEPLQFSTDIDVKDKREFILELLKQVELAPEL LTRRRDELSGGQLQRVCLARALSTKPQIMIFDESLSGLDPLVQDKILDLLYKIQKEYNLT YIFISHDFRLCYFLADRIILIDKGKIIEDFKDLDKEIIPKTEIGKILLENIIN >gi|292606555|gb|ADGG01000055.1| GENE 16 13678 - 14037 325 119 aa, chain - ## HITS:1 COG:FN1904 KEGG:ns NR:ns ## COG: FN1904 COG1733 # Protein_GI_number: 19705209 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 1 118 30 147 148 211 91.0 4e-55 MDRNKKYNCFFEFTLDIVGGKWKPIILYYININSVARYSELKRFIPSINERMLTRQLREL EEDNLIERKVYPVVPPKVEYRLTKYGETLIPILKSLVLWGQDYAKAIKFDNFKMEFPKN >gi|292606555|gb|ADGG01000055.1| GENE 17 14224 - 16653 3102 809 aa, chain + ## HITS:1 COG:FN1903_1 KEGG:ns NR:ns ## COG: FN1903_1 COG0446 # Protein_GI_number: 19705208 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 469 1 469 469 775 88.0 0 MKKVLIVGGVAGGASTATRLRRLDENLEIIIFEKGEYVSFANCGLPYHIGEVIENRESLL VQTPESLKARFNLDVRVKSEVIEVNGEDKKVKVKTKNGEEYEENFDFLVLSPGAKPLFPS IKGIESNKIFTLRNINDMDKIKAEIKNSNIKKATVVGGGYVGVETAENLKHLGIDTTLIE AAPHILESFDSEISNILEFELINNGLKLMTSEKVVEFQEAENEIIIKLESGKTVTTDIVI LSIGVSPDTKFLQNSGINLGEKGHILVNENLETNLKGVCALGDSILVKNYLTNQDVAIPL AGPANRQGRIVAGNIVGRNEKYKGSLGTAIIKIFELTAASTGLNERALKQLNIPYEKIYL HPNNHAAYYPGASPISIKALYNKENKQILGAQALGISGVDKFIDVIATSIKFKATIDDLS ELELAYAPLFLSAKSPANMLGFIGQNIEDGLLEQVFMEDLKNYNEKENIILDVREELELI GGKFNNSINIPLSELRKRYNELPKDKEIWTYCAVGLRGYIASRFLSQKGYKVKNLAGGIK SREKVILKAKEEENVNKESNSNIGKEEDYLDLSGLSCPGPLVKIKEKIDKLQENEELKVK VSDPGFYNDIQAWSKVTKNTLLSLDKKDGLTYATLQKGKTSKVIEKNHKNMIIEDKSNMT MVVFSGDLDKAIAAFIIANGALTMGKKVTMFFTFWGLSILKKKNLSKKNFIEKMFAMMLP KNSKDLPVSKMNFFGIGAKMIRSVMRKKNIMSLEELIKKAIDSGVNITACTMSMDVMGIN KEELIDGINYGGVGQYLGEAEKSNNNLFI >gi|292606555|gb|ADGG01000055.1| GENE 18 16709 - 17608 1137 299 aa, chain - ## HITS:1 COG:FN1498 KEGG:ns NR:ns ## COG: FN1498 COG0697 # Protein_GI_number: 19704830 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 285 1 285 299 439 89.0 1e-123 MDKHIKGALLVCLAATMWGFDGIALTPRLFNLHVPFVVFILHLLPLILMSVIFGREEIKN IRKLDKNDLFFFFCVALFGGSLGTLSIVKALFLVNFKHLTVVTLLQKLQPIFAILLARIL LKEKLKKDYLFWGFLALLGGYFLTFEFNVPEVVEGDNLLAASLYSLLAAFSFGSATVFGK RVLKAASFRTALYVRYLMTTCIMFVIVAFTSGFGDFSQATGGNWLIFVIIALTTGSGAIL LYYFGLRYITAKVATMCELCFPISSVIFDYLINGNVLSPIQIASAILMIISIIKISRLN >gi|292606555|gb|ADGG01000055.1| GENE 19 18129 - 18434 214 101 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1174 NR:ns ## KEGG: Lebu_1174 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 7 98 87 178 178 78 50.0 8e-14 MAYDKRHRKHEDLAFLLEKKHSSKLINRVYDLAVMELDYKKEDEFFNIARKCTYALGYTN TPKAKEKLELLAKNENELIREYAIKQLNRHDFTDKDVEEQD >gi|292606555|gb|ADGG01000055.1| GENE 20 18473 - 19015 708 180 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783814|ref|ZP_06749136.1| ## NR: gi|294783814|ref|ZP_06749136.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 180 1 180 180 288 100.0 1e-76 MERVVYIRGKFKGNNKEMKEAYLYAKEMMRKYDLEPQYIGIIATEGWEKPGILTIKRKEK QLLEDLEKNKKIESIQVITKEMEEKEIINNKSSFLINQKYGIIAFWTNTNIEKVNFEEIL EKMKKYVEPGIEEIFDWESGSSPIVYVYEGEKSLERTGKFQDKITIIYKKITPLDIPIEV >gi|292606555|gb|ADGG01000055.1| GENE 21 19173 - 19592 461 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783815|ref|ZP_06749137.1| ## NR: gi|294783815|ref|ZP_06749137.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 139 1 139 139 224 100.0 9e-58 MVLKFHYIKNKNNIFQSCEVNEKYKFISFYLHNPIDCKNFLKFTKKALEENLKKDISGED VAAELDIEENKIIIYDIDTYFDGDEPDELLEIKKEDLIYILDRWIKFLEKPITDENYEEI FEMEDPVVKVLKDGKYVTI >gi|292606555|gb|ADGG01000055.1| GENE 22 19810 - 20148 448 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783816|ref|ZP_06749138.1| ## NR: gi|294783816|ref|ZP_06749138.1| hypothetical protein HMPREF0400_01813 [Fusobacterium sp. 1_1_41FAA] # 1 112 16 127 127 186 100.0 3e-46 MERMRYIRVPKDIKAMKDYDYGVQKDEQMEELILSESQYSVFYTLKVFQLINEECDVLID DYEEEVLSLEKIPLALRIVNKIIQNSNDINLIKFKNMLELAIKYRTIVGFDF >gi|292606555|gb|ADGG01000055.1| GENE 23 20486 - 21319 966 277 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783817|ref|ZP_06749139.1| ## NR: gi|294783817|ref|ZP_06749139.1| hypothetical protein HMPREF0400_01814 [Fusobacterium sp. 1_1_41FAA] # 1 277 1 277 277 419 100.0 1e-115 MLSNRLIITEKSKRKAIYENSKDKWIIDFEDKIKSWSDFYDIIQKEMDFLGYNEKFRKDN YTYHDIVGDLIVFEKMKERKKEGIVFILDYTEDFRKIKDCDKKDYDKGTIYYDLVYNLLV EWYRDNRIMFKEWNASIDIEVYILIDDNSIKDKNIDFDNELIIATENDRNDVRQQYKNYD KTKIRFFDYDEIKDLPNIFLDNKRGFEAENFIFFYQLEKIKADNSKQLKVEISNSVGIFH SLSIYLLVYIIDKILIEKFIEGKEIKMFMIFANELAE >gi|292606555|gb|ADGG01000055.1| GENE 24 21566 - 21868 450 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783818|ref|ZP_06749140.1| ## NR: gi|294783818|ref|ZP_06749140.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 100 5 104 104 141 100.0 1e-32 MNFLKLKDAANKLLEFMEKYDLDDYNERLVRKFLKELIYVIDTDEIDDVKKYQEVKKIIG RLYPPRGGLTEMYVADEDREKMNKINDELEELKKKITLLD >gi|292606555|gb|ADGG01000055.1| GENE 25 21924 - 22124 305 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783819|ref|ZP_06749141.1| ## NR: gi|294783819|ref|ZP_06749141.1| hypothetical protein HMPREF0400_01816 [Fusobacterium sp. 1_1_41FAA] # 1 66 1 66 66 101 100.0 1e-20 MRTYEEDKRDLIYLINKYCIDDLKEELLDIVKNKFAPKYVFSKFSSNSKMIKEDADLYSI IIHKYI >gi|292606555|gb|ADGG01000055.1| GENE 26 22213 - 22431 363 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|256027144|ref|ZP_05440978.1| ## NR: gi|256027144|ref|ZP_05440978.1| hemolysin [Fusobacterium sp. D11] # 2 72 812 882 882 142 97.0 6e-33 MTGKLKVRIPYTFGNTGKDLEPFTEYYPEYGQGGELQMIRLRWDEDLIIKYDRLDILPNP RTDLILKEEIIK >gi|292606555|gb|ADGG01000055.1| GENE 27 22436 - 22645 83 69 aa, chain - ## HITS:1 COG:FN1817 KEGG:ns NR:ns ## COG: FN1817 COG3210 # Protein_GI_number: 19705122 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Fusobacterium nucleatum # 17 60 1326 1369 2806 80 88.0 6e-16 MLNKIVIKIFKRKFLKKWNRVRRLGDTYYENELIERSITEKLGTRFLNGKEILAKELMDN VAIIKIYRE >gi|292606555|gb|ADGG01000055.1| GENE 28 22635 - 22994 377 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783822|ref|ZP_06749144.1| ## NR: gi|294783822|ref|ZP_06749144.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 119 1 119 119 166 100.0 4e-40 MKERLEKDMKENKIIVHKNILNINNLIREFPTKILEIIEFKNFIIIRIGYNSQISDNIFC INYENKIIWNISEIIKKDNEAYTGINKISENIIEVFLFIGVCYRIDVVERKVLKKEIVK >gi|292606555|gb|ADGG01000055.1| GENE 29 23241 - 23636 628 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783823|ref|ZP_06749145.1| ## NR: gi|294783823|ref|ZP_06749145.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 131 1 131 131 236 100.0 4e-61 MKFRFGYLKLIDKSIYKKDKIILVCDSVSNNQDENIIGCYINDISNFESNLTEICGELDK RKYSRLDGQVWGADFLKDKVHIYWVFDPDNEEGKAEISRKGMLKLMKKWIEFRKKKIPEN YEKYEEIIEVD >gi|292606555|gb|ADGG01000055.1| GENE 30 23895 - 24422 435 175 aa, chain - ## HITS:1 COG:no KEGG:FN0142 NR:ns ## KEGG: FN0142 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 15 175 1 160 160 199 67.0 4e-50 MILITIFSLIIIFLLQFIYLVPENHYTILDQTGEVRLEDYPEIKDISFMYNTDLLIEFYS KRDDLKLERINFLFNNDVIGTVEINKNINDLEDFGETYIAENGEKVSIRKIYPLQKEFLR ILGRNAKVYDSLEDGRFYIDIYIKDLKTNNIFIIKRDNISIYYESGGPKVFLPNI >gi|292606555|gb|ADGG01000055.1| GENE 31 24584 - 26200 2258 538 aa, chain - ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 1 538 1 538 538 877 88.0 0 MEEILVFGHKNPDTDSICSSIAMSNLRKQQGFNAIPCRLGEINKETKFVLDKLGVKSPKL LKTVSAQITDLNYVEKSTISTEDSIKEALDLMTKENFSSLPVIDTEGYFKTMLSISDIAN TYLEIDYSDLFSKYSTTFENLKEALEGEVISGNYPEGEIASNLKEASELESLKKGDIVIT TSLTDGIDKSIQAGARVVIVCCRKGDFISPRVTSECAIMLVRHSFFKAISLISQSISVGG ILNTDKVLFNFNKEDFLSEIRGIMKDANQTNFPVLEDDGKVYGTIRTKHLIDFHRKKVIM VDHNEFSQSVEGIQDAHILEVVDHHKFANFQTNEATKIRTEPVGCTSTIVYGLYKEAKIE PDEKTALLMLSAILSDTLLFKSPTCTSRDVEVAKELAKLAKVDNIQEYGMEMLVAGTSMA KSSMKEIINQDKKIFPIGDMEIAVAQINTVQIEELSARKEEIAKEIEHEIGKYGYSLFLF VVTDIINSNSLVFTYGKEIELVENAFKKEVVNNEILLENVVSRKKQIIPFLMTAAQNM >gi|292606555|gb|ADGG01000055.1| GENE 32 26316 - 26771 720 151 aa, chain + ## HITS:1 COG:no KEGG:FN1825 NR:ns ## KEGG: FN1825 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 151 1 145 145 224 86.0 5e-58 MKKLFLLIALSLSLASCGLVSATGSVVGGTISAVGSVTGAVIKTTGKIIGAVIGGSDSEV KVKDTKYKFSGVEMEVDQYTAVITGTLTHNGSTKKNLRLSIPCFDKKGNRVGDAIATIDE LEKGKKWKFRAVLNEENVASCKIKDAYITVE >gi|292606555|gb|ADGG01000055.1| GENE 33 26858 - 28270 795 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 3 447 2 445 456 310 38 6e-84 METLNSIVGQINTVLWSYVLIALLILSGLFYTIRTGFAQGRLLGDMVALITGKLSSLRDG EKKVAGQVTGFQAFCIAVASHVGTGNLAGVAIAVAVGGPGALFWMWVIALLGGATSLIEN TLAQTYKVKEGNGFRGGPSYYMEKALGQKTLGYIFSVIVIVTFAFVFNTVQANTIAQAFE TSFNMSSAVAGVILAALTALIIFGGLNRIANVVSFMVPIMAIGYVIVALYVLIVNAVHIP ALFMSIIEAAFGIKQAVGGAIGVAMLQGIKRGLYSNEAGMGSAPNAAATSNVSHPVKQGL LQAFGVFVDTILICSATGFIVLLYPEYNTIGEKGIKLTQLALSHSVGAWGAGFITLCIFL FAFSSLVGNYYYGEANLEFLTKSKTSMLVFRVLTVACVYLGSVASLGLVWDIADVSMGIM ALMNIVVIAILSPKAVAIINDYIKQRKEGKNPVFRAKDIPGLENTECWDD >gi|292606555|gb|ADGG01000055.1| GENE 34 28311 - 29225 1257 304 aa, chain - ## HITS:1 COG:FN1397 KEGG:ns NR:ns ## COG: FN1397 COG2066 # Protein_GI_number: 19704729 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Fusobacterium nucleatum # 1 304 1 304 304 546 92.0 1e-155 MEELLKELVEKNRKFAVDGNVANYIPELDKADKNALGIYVTTLDGQEFFAGDCNTKFTIQ SISKIISLMLAILDNGEEYVFSKVGMEPSGDPFNSIRKLETSSRKKPYNPMINAGAIAVA SMIKGKNEKERFTRLLDFAKLITEDDSLDINYKIYCGEADTGFRNFSMAYFLKGEGIIEG NVEEALTVYFKQCSIEGTAKTISTLGKFLANDGVLSNGERIITTRMAKIVKTLMVTCGMY DSSGEFAVKVGIPSKSGVGGGICSVVPGKMGIGVYGPALDKKGNSLAGGYLLADLSEELS LNIF >gi|292606555|gb|ADGG01000055.1| GENE 35 29468 - 29767 475 99 aa, chain + ## HITS:1 COG:no KEGG:FN1395 NR:ns ## KEGG: FN1395 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 99 1 99 99 105 75.0 6e-22 MNNENEGFDIMSFLFNNKSFIEGLIENLKKELMEVIFSENLNIFKKSIFIQGVFTYANLI LSNNESLTKEEKTKIMEEIVEISNLLADETFEDVKKYAN >gi|292606555|gb|ADGG01000055.1| GENE 36 29811 - 31028 1875 405 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 405 1 405 405 792 93.0 0 MHNVRNITENLYWIGANDRRLALFENIHPIPEGVSYNSYMLLDEKTVVFDTVDWSVTRQY VENIEYLLNGRELDYLVVHHMEPDHCGSIEELALRYPNLKIISSEKGFMFMRQFGYKSIN GHELIEVKEGDKFKFGKHEIVFLEAPMVHWPEVLVSFDTTNGALFSADAFGSFKSLDGRL FNDEVNWDRDWLDEGRRYLTNIVGKYGPHIQHLLKKAGPIVDKIKFICPLHGVVWRNDFG YIIDKYDKWSRYEPEEKGVLIAYASMYGNTENAVEVIAKKLAEKGVTNIKMYDVSNTHVS YLISDLFKYSHLIIASPTYNLGIYPVIHNFVMDIKALNLQNRTVAIVENGSWARKSGDLL QEFFETQVKDIAVLNEKVGLTSSANNVNLDEMDALVDVLVESLKK >gi|292606555|gb|ADGG01000055.1| GENE 37 31054 - 32964 2719 636 aa, chain - ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 377 1 377 377 725 98.0 0 MLFKTTEEHEALRMQVREFVETEVKPIAAMLDKENKFPHEAIEKFGKMGFMGLPYPKEYG GAGKDILSYAIAVEELSRVDGGTGVILSAHVSLGSYPIFAFGTEEQKKKYLTPLAKGEKL GAFGLTEPNAGSDAGGTETTAVKEGDYYILNGEKIFITNADVAETYVVFAVTTPDIGTKG ISAFIVEKGWEGFTFGDHYDKLGIRSSSTCQLLFNNVKVPKENLLGKEGDGFKIAMSTLD GGRIGIAAQALGIAQGAFEHALEYAKEREQFGKPIAFQQAVSFKLADMATKLRTARFLIY SAAELKEHHEPYGMESAMAKQYASDIALEVVNDALQIFGGSGYLKGMEVERAYRDAKITT IYEGTNEIQRVVIAAHLIGKPPKSDAVAVAKKKKGPVTGPRKNIIFKDGSAKEKVAALVA ALKADGYDFTVGIPLNTPIGKSERVVSAGKGIGDKKNMKLIEKLATQAGASVGCSRPVAE TLQYLPLDRYVGMSGQKFVGNLYIACGISGALQHLKGIKDATTIVAINTNANAPIFKNAD YGIVGDIAEILPLLTKELDNGEAKKDAPPMKKMKRVLPKVMYSPHVYVCSGCGHEYNPEI GDEDSDIKPGTRFKDLPEDWTCPDCGDPKSGYIDAK >gi|292606555|gb|ADGG01000055.1| GENE 38 33446 - 34186 652 246 aa, chain - ## HITS:1 COG:FN1600 KEGG:ns NR:ns ## COG: FN1600 COG0101 # Protein_GI_number: 19704921 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Fusobacterium nucleatum # 1 245 3 247 247 399 85.0 1e-111 MERKNIKIEFRYDGSRYYGFQRQPDKVTVQGEIEKILKIVTKEDINLISAGRTDRGVHAN QQVSNFYTSSNIPVEKYKYLLTRALPKDIDILSVEEVDKNFNARHDAKMREYIYIISWEK NPFEARYCKFVKNKIDVEKLKKIFSSFLGIHDFRNFRLSDCVSKITIREIYSIDINYFSE NKLKIYIRGSAFLKSQVRIMVGTALEVYYGNLPENHIELMLNDFSKDYKKNLVEAEGLYL NKIYYS >gi|292606555|gb|ADGG01000055.1| GENE 39 34200 - 35276 1118 358 aa, chain - ## HITS:1 COG:FN1601 KEGG:ns NR:ns ## COG: FN1601 COG2404 # Protein_GI_number: 19704922 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase (DHH superfamily) # Organism: Fusobacterium nucleatum # 1 358 1 358 358 606 82.0 1e-173 MADILYDTRLKSEQAPKVIILTHGDADGLVSAMIVKSFEEMENRSKTFLIMSSMDVTSEQ TDKTFDYICKYTSLGPKDRVYILDRPIPSIDWLKMKYLAYTNVINIDHHLTNKPTLYKDE CCCENIFFHWSDKWSAAYLTLEWFKPLVEKAERYKNLYKKLEDLALATSCWDIFTWKNLG SSQEDILLKKRALAINSAEKILGSEAFYNFITKKTNSQNYTKEIFDYFFLLDEAYSLKIN NLYDFAKRVISDFDFKGYKLGVIYGIEGDYQSIIGDKILADKKLNYDVVAFLNVYGTVSF RSKDEVDVSEIAQKLGMLVGYSGGGHKHAAGCRICDKDEMKKKMFEIFEHSMDKIRVL Prediction of potential genes in microbial genomes Time: Thu May 19 22:36:06 2011 Seq name: gi|292606554|gb|ADGG01000056.1| Fusobacterium sp. 1_1_41FAA cont1.56, whole genome shotgun sequence Length of sequence - 8969 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 2, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 18 - 1025 1383 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2 1 Op 2 . - CDS 1049 - 1522 716 ## FN1910 hypothetical protein 3 1 Op 3 . - CDS 1561 - 3654 2788 ## COG4775 Outer membrane protein/protective antigen OMA87 4 1 Op 4 . - CDS 3725 - 8230 5162 ## FN1912 hypothetical protein - Prom 8354 - 8413 13.2 + Prom 8241 - 8300 16.2 5 2 Op 1 . + CDS 8420 - 8752 283 ## Cthe_0307 hypothetical protein 6 2 Op 2 . + CDS 8728 - 8968 65 ## gi|294783839|ref|ZP_06749161.1| conserved hypothetical protein Predicted protein(s) >gi|292606554|gb|ADGG01000056.1| GENE 1 18 - 1025 1383 335 aa, chain - ## HITS:1 COG:FN1909 KEGG:ns NR:ns ## COG: FN1909 COG1044 # Protein_GI_number: 19705214 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Fusobacterium nucleatum # 1 331 1 331 332 584 96.0 1e-167 MEYKVTDIITLLNAEYKGEVIENVSKLSPFFHSDEKSLTFAADEKFLKNLAQTKAKVIIV PDIELPLIEGKGYIVVKDSPRIIMPKLLHFFSRTLKKIEKMREDSAKIGENVDIAPNVYI GHDVVIGNNVKIFPNVTIGEGVTIGEGTVIYSNVTIREFVKIGKNCVIQPGAVIGSDGFG FVKVNGNNTKINQIGTVIVEDEVEIGANTTIDRGAIGDTIIKKYTKIDNLVQIAHNDIIG ENCLIISQVGIAGSTTIGNNVTLAGQVGVAGHLEIGDNTMIGAQSGVPGNVEANKILSGH PLVDHREDMKIRVAMKKLPELLKRVKALEEKNSYN >gi|292606554|gb|ADGG01000056.1| GENE 2 1049 - 1522 716 157 aa, chain - ## HITS:1 COG:no KEGG:FN1910 NR:ns ## KEGG: FN1910 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 157 1 157 157 162 90.0 3e-39 MKKLLLIAGVLLATTAFAEKIGVVDSQKAFFQFSETKKAQQALEGQAKKVENEARQKEVA LQKEFVSLQAKGDKLTDAEKKAFEKKSQDFQSFLNSSQDKLNKEQMAKLKRIEDVYVKAI KKVAAEGKYDYIFEADALKVGGEDITDKVLKQMEALK >gi|292606554|gb|ADGG01000056.1| GENE 3 1561 - 3654 2788 697 aa, chain - ## HITS:1 COG:FN1911 KEGG:ns NR:ns ## COG: FN1911 COG4775 # Protein_GI_number: 19705216 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Fusobacterium nucleatum # 20 697 1 678 678 1157 84.0 0 MKRLLIALMFVISLVSFSTMTNLPIKSIEVVNNNQVPTSLIKNTLKLREGSKFSTDALVA DFNALKGTGYFEDVMLQPISSDGGVRIVVDVIEKQNVASLLKEKGVAVNTVREDTDKSVI ISSIIFNGNKKYSAAELQKITQLKTGEYFSRSRVEEAQRNLLATGKFSEVKPDAKVANGK MNLSFDVVENPIVKNVVVTGNHAVSTSAIMSVLSTKSGAVQNYNNLREDRDKILGLYQAQ GYTLVNITDMSTDENGTLRIAIVEGIVRKIEVKKMVTKQKGNRRTPNDDVLKTQDYVIDR EIEIQPGKIFNVKEYDATVDNLMRLGIFKNVKYEARSIPGDPEGIDLILLIDEDRTAELQ GGVAYGSETGLMGTLSLKDSNWRGKNQELGFTFEKSNKDYTSFSLDFFDPWIRNTDRVSW GWGAYKTSYGDSDSILFHDIDTLGFKVNIGKGFSKYFRLSIGAKIEYIKEKHENGKLQKA PNGNWYYKDVAGWRQIEGVDDKYVLWSIYPYISYDTRNNYLNPTTGTYAKFQIEGGHAGG YKAGNFGNVTLELRKYHRGLFKNNTFAYKVVGGVMSDGTKESQKFWVGGGNSLRGYDGGF FKGTQKLVATIENRTQLNDIVGLVVFADAGRAWKQNGRDPSYTRDNKDFGRNIGTTAGVG VRLNTPIGPLRFDFGWPVGNKMDDDGMKFYFNMGQSF >gi|292606554|gb|ADGG01000056.1| GENE 4 3725 - 8230 5162 1501 aa, chain - ## HITS:1 COG:no KEGG:FN1912 NR:ns ## KEGG: FN1912 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 327 1501 1 1175 1175 1399 67.0 0 MSKKEASLMFKNFSLNKIPKKVSIPLIAATVLGLITTVALSNLEKIVEKVSSRFINGRVH IEDIDLSLSEPVIKNITLYDNENNVMFNSDKVVAKISFKNLLDGRIDELNVDSASVNVVR DKDGVINFTKLSKKKSDKKPSNPIDKLVVTSANINYEDYTFLNKLEKKIENINATVLADK EKLVKNADVSIDDENIKLNTSFKDESEKDLSSLEMKLKIDKFLLDKDLLKSLAKNNEKLE FSDVNISSDLTIKTDKTVKNTNIVGNLDVESPLFRYTDVESDIKNIKLSGVFNGRDGKAN LDLNVFDKDRNIAVTYQDEELNSVINIDKIDESILNKIKPIKDKKLDLKNINIEDIKTIV HYSDERGLILKTTMKPNNSEFKGIELNDFNLYADLKDGEKRANAKISAKIKGMAENLTVN LENKAENTDIIVALKSQEKDSIIPDINLKANLENKKDILKAKITSNIVNFNMDYQKEAKL AKIYDEKFKINYDVNKKNLTDGDGKIAFKIYDTDNYLDFKAKDNQVEIKELKLMDKLNKN NTLIAKGNADLNKKEFNIDYDAKLNSVSRKFKDKNIVLSFDAKGKAESKNNIISSQGQIN DLSLEYMGKIEKINGTYDFKKSDSGMEANLKTKIASIGYDKYKFDNFNLLVTYSGNEVKV RDFSNNLLSFKADYNTEAKKLSGDLNIKRLTDKDIGLDKVNFVLENFKAKLDGDIKTPKA KIDLGTTVVTLPSKDLAKISGKLNLVGDKLIIEGVNVDNNLITGQYDIKEKLLNLKASLS ENHLEKYYGGKDLGYILYGDLVLKGVAGNLDAKLKGKAINLQSSFPDLAYNIDYSAENYS DGLVSINDLDIIDKNNGSILGLTGTVDLKEKNLNIKNKNDKIDLTKLQNILKNPSIKGIV NTDILINGQLSNPNYSLNMSSSEVSIKNFKINDIVLNITGDKEKANVNKLSLDVYKNLIV GSGNYDIKNKTYNVNMKSSNKIDLSKFQAFFNSYGIDNPSGKVGFNVQIDQNDEKAYLSL ENINLESSKLKLKFSNFSGPITLSGRRIEIGELNAKLNNSPITIDGFVDLVDIAKIDKED IIRSLPYKLHIKSKELNYEYPKVIKIKASTDITLTNEELYGSLIIKKATLNDIPNNYYKD FFSLIKEQLRKRRTDVTPKKKVDKNSREAEEKAARMRVFLNKLMPIDLVIKTEEPILIDM DDFNILVPEIYGKLDIDLNINGKKGKYYIEGETELKDGYFVIGTNEFKVDRALAIYNDNT PLPEINPNVFFESTIDMDDEEYYFTTMGKLNQLRYEITSKTSKVGGDLSALIVNPDSNEH IYSYGDGSQIFIVFMKNLIAGQIGQTVFGKTARYVKRKLNLTRFVIRPEIKIYNSEDSVT NRYGTTDNRALSPQIYNVNIKMEAKDNIYKDKLFWKASARLISTGKDTIRNQAMKVNSQN IREYDVGLEYKIDDSKTIGVGVGTVPYKYRTDENKDYKKPNYYIEYKFRKRYKDFSEIFS F >gi|292606554|gb|ADGG01000056.1| GENE 5 8420 - 8752 283 110 aa, chain + ## HITS:1 COG:no KEGG:Cthe_0307 NR:ns ## KEGG: Cthe_0307 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 4 109 13 125 125 84 45.0 1e-15 MKQRSVFLGVILSFLTCGIYATVWIWILNNELRVANGKNKNSFLNFILSIVTCGIFYLVW NYKLGQEVEDFGGKDEGVLYLFLAFFSFGIISIALAQSQVNQICERNGIS >gi|292606554|gb|ADGG01000056.1| GENE 6 8728 - 8968 65 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294783839|ref|ZP_06749161.1| ## NR: gi|294783839|ref|ZP_06749161.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 13 80 1 68 116 122 98.0 7e-27 MRKKWNLLIIFIVIALVSIFVDRFFDGRSICLFYNIYGVACPSCGMTRSYMALLHGDIHQ AIYFHPLFWVVPLLLIFYKK Prediction of potential genes in microbial genomes Time: Thu May 19 22:36:42 2011 Seq name: gi|292606553|gb|ADGG01000057.1| Fusobacterium sp. 1_1_41FAA cont1.57, whole genome shotgun sequence Length of sequence - 45243 bp Number of predicted genes - 38, with homology - 38 Number of transcription units - 12, operones - 7 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 419 146 ## Cthe_0308 hypothetical protein + Term 421 - 453 -0.0 2 1 Op 2 1/0.000 + CDS 492 - 1823 983 ## COG0534 Na+-driven multidrug efflux pump 3 1 Op 3 . + CDS 1826 - 2434 691 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 4 2 Op 1 2/0.000 - CDS 2716 - 3993 1486 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases - Prom 4013 - 4072 3.5 5 2 Op 2 5/0.000 - CDS 4074 - 5348 1494 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 6 2 Op 3 . - CDS 5388 - 6323 1135 ## COG0517 FOG: CBS domain - Prom 6347 - 6406 9.6 7 3 Tu 1 . - CDS 6436 - 6681 513 ## FN0683 hypothetical protein - Prom 6709 - 6768 10.8 + Prom 6694 - 6753 17.4 8 4 Tu 1 . + CDS 6863 - 8563 2581 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 8581 - 8617 4.2 - Term 8621 - 8673 12.1 9 5 Tu 1 . - CDS 8690 - 9721 1128 ## COG1454 Alcohol dehydrogenase, class IV - Prom 9742 - 9801 4.3 10 6 Op 1 . - CDS 9823 - 10923 1402 ## FN0091 phosphoserine phosphatase (EC:3.1.3.3) 11 6 Op 2 4/0.000 - CDS 10945 - 11382 553 ## COG4917 Ethanolamine utilization protein 12 6 Op 3 1/0.000 - CDS 11385 - 11726 487 ## COG4810 Ethanolamine utilization protein 13 6 Op 4 5/0.000 - CDS 11728 - 12555 1185 ## COG0294 Dihydropteroate synthase and related enzymes 14 6 Op 5 2/0.000 - CDS 12542 - 13360 626 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 - Prom 13381 - 13440 5.5 15 6 Op 6 1/0.000 - CDS 13553 - 14104 566 ## COG0302 GTP cyclohydrolase I 16 6 Op 7 19/0.000 - CDS 14115 - 16178 2652 ## COG0751 Glycyl-tRNA synthetase, beta subunit - Prom 16247 - 16306 4.2 17 6 Op 8 1/0.000 - CDS 16455 - 17327 1215 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 18 6 Op 9 16/0.000 - CDS 17329 - 17787 469 ## COG0597 Lipoprotein signal peptidase 19 6 Op 10 1/0.000 - CDS 17796 - 20597 4300 ## COG0060 Isoleucyl-tRNA synthetase 20 6 Op 11 1/0.000 - CDS 20594 - 23011 1990 ## COG0642 Signal transduction histidine kinase 21 6 Op 12 . - CDS 23031 - 25232 1699 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein - Prom 25279 - 25338 8.9 - Term 25287 - 25335 8.7 22 7 Op 1 4/0.000 - CDS 25352 - 28348 3905 ## COG3587 Restriction endonuclease 23 7 Op 2 . - CDS 28358 - 30148 1792 ## COG2189 Adenine specific DNA methylase Mod 24 7 Op 3 . - CDS 30124 - 30270 194 ## gi|237740847|ref|ZP_04571328.1| type III restriction system methylase - Prom 30291 - 30350 7.6 25 8 Tu 1 . - CDS 30408 - 31304 1050 ## COG4823 Abortive infection bacteriophage resistance protein - Prom 31383 - 31442 7.1 - Term 31540 - 31579 1.1 26 9 Op 1 . - CDS 31668 - 33551 2039 ## COG2189 Adenine specific DNA methylase Mod 27 9 Op 2 . - CDS 33566 - 34252 728 ## FN0415 hypothetical protein 28 9 Op 3 . - CDS 34261 - 37479 3274 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 37517 - 37576 12.3 - Term 37563 - 37605 6.5 29 10 Op 1 . - CDS 37625 - 38326 681 ## gi|294783865|ref|ZP_06749187.1| conserved hypothetical protein 30 10 Op 2 . - CDS 38313 - 38681 587 ## gi|294783866|ref|ZP_06749188.1| conserved hypothetical protein 31 10 Op 3 . - CDS 38703 - 39047 552 ## Lm4b_00493 hypothetical protein 32 10 Op 4 . - CDS 39056 - 39559 359 ## CCC13826_1945 carbon monoxide dehydrogenase 1 (CODH 1) (EC:1.2.99.2) 33 10 Op 5 . - CDS 39562 - 40656 1080 ## gi|294783869|ref|ZP_06749191.1| conserved hypothetical protein 34 10 Op 6 . - CDS 40656 - 41705 1159 ## COG2849 Uncharacterized protein conserved in bacteria 35 10 Op 7 . - CDS 41689 - 42624 921 ## Lebu_2020 hypothetical protein - Prom 42648 - 42707 11.1 - Term 42673 - 42726 7.2 36 11 Op 1 2/0.000 - CDS 42729 - 44243 2088 ## COG0225 Peptide methionine sulfoxide reductase 37 11 Op 2 . - CDS 44267 - 44944 643 ## COG0785 Cytochrome c biogenesis protein - Prom 44970 - 45029 1.5 38 12 Tu 1 . - CDS 45040 - 45240 167 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606553|gb|ADGG01000057.1| GENE 1 3 - 419 146 138 aa, chain + ## HITS:1 COG:no KEGG:Cthe_0308 NR:ns ## KEGG: Cthe_0308 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 40 130 3 105 112 77 36.0 1e-13 SLSSKSGKSNMRKKWNLLIIFIVIALVSIFVDRFFDGRSICLFYNIYGVACPSCGMTRSY MALLHGDIHQAIYFHPLFWVVPLLLIFYKKKKIFYSIALLFIVVWIIRLFLYFPTREPFN FNENAIFPKLYRTIKNKF >gi|292606553|gb|ADGG01000057.1| GENE 2 492 - 1823 983 443 aa, chain + ## HITS:1 COG:FN1469 KEGG:ns NR:ns ## COG: FN1469 COG0534 # Protein_GI_number: 19704801 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 16 443 13 440 440 553 80.0 1e-157 MTMISNKPILKTIFKYAIPNVISMWIFTLYTMVDGIFISRFVGSTALAGVNLVLPLINFI FSISIMIGVGSSTLIAIKFGENKYDEGNKIFTLATLLNLFSAIFISLLVLLNLERVINIL GANKSQEVYQYVKDYLSVIVFFSVFYMSGYAFEIYIKIDGKPSYPTICVLVGGITNLILD YLFVVVFHYGVTGAAIATGISQVTCCSMLLFYIIFKAQKIKFKKSFRFDFDRIIKIFKTG FSEFLTEISSGILILIYNLVILKRIGVTGVSIFGTISYISSFITMTMIGFSQGIQPIISY NLGKKHYKNLKDILKISITFLGILGIVCFIFITSFSEYIGRIFFKEKDMILRVKDVLRVY SLSYLLIGINIFISAYFTALKRVTYSAFITFPRGILFNSILLLILPTIFGNKSIWFVTFL SEALSVFICLFLLKKLKREGILS >gi|292606553|gb|ADGG01000057.1| GENE 3 1826 - 2434 691 202 aa, chain + ## HITS:1 COG:FN1468 KEGG:ns NR:ns ## COG: FN1468 COG1853 # Protein_GI_number: 19704800 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 1 185 1 185 197 304 89.0 9e-83 MKKRNLKGSVVLNPVPAVLVTCKNSEGKDNVFTVAWVGTICSRPPMLSISIRPERLSYDY IKETMEFTINLPSKKQTKVVDFCGVRSGRQINKIKECAFTLHDGLKVKSSYIEECPINIE CKVKDIIKLGSHDMFIAEVLTSHINEDLFDEKDKIHFEKADLISYSHGEYFALSKDAIGK FGYSVAKKKEKNKKKSKKIIHY >gi|292606553|gb|ADGG01000057.1| GENE 4 2716 - 3993 1486 425 aa, chain - ## HITS:1 COG:FN1924 KEGG:ns NR:ns ## COG: FN1924 COG1055 # Protein_GI_number: 19705229 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Fusobacterium nucleatum # 1 425 1 425 425 641 92.0 0 MLLGLGILIFVIVFYCIITEKVASAYATMLGALAMAFLGIVNEEEILETIHSRLEILLLL IGMMIIVSLISETGVFQWFAIKVVKIVRGDPLKLLILLSIVTATCSAFLDNVTTILLMAP VSILLAKQLKLDPFPFVMTEVLSSDIGGMATLIGDPTQLIIGSEGKISFNEFLFNTAPMT IIALAILLTVVYFTNIRKMQVPNTLRAQIMELESDRILTNKKLLKQSIIILTAVIIGFVL NNFVNKGLAVISLSGGILLAFLTEREPKKIFAAVEWDTLFFFIGLFVMIRGIENLGIIKY IGDKIIELSTGNFKVASISIMWLSSIFTSIFGNVANAATFSKIIKTVIPDFQTIADTKVF WWALSFGSCLGGSITMIGSATNVVAVSASAKAGCKIDFMKFFKFGSKIAILNLIAATVYM YLRYL >gi|292606553|gb|ADGG01000057.1| GENE 5 4074 - 5348 1494 424 aa, chain - ## HITS:1 COG:FN1925 KEGG:ns NR:ns ## COG: FN1925 COG1055 # Protein_GI_number: 19705230 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Fusobacterium nucleatum # 1 424 1 424 424 674 93.0 0 MLYVGILIFIAVFYCIITEKIPSAWATMAGGLLMTLIGIINQEEVLETVYNRLEILFLLV GMMMIVLLISETGVFQWFAIKVAQLVRGEPFKLIVLLACVTALCSAFLDNVTTILLMAPV SILLAKQLKLDPFPFVITEVMSANIGGLATLIGDPTQLIIGAEGKLTFNEFLANTAPVAI LSMIALLATVYFMYAKNMKVSNELKAKIMELDSSRSLKDMKLLKQSIVIFSLVIIGFILN NFVDKGLAMIALSGAVCLSLLAKKSPKEMFEGVEWETLFFFIGLFMMIKGIENLDIIKFI GDKMIAITEGHFGGAVLSTMWISALFTSVIGNVANAATFSKIINIMTPSFAGVGGIKALW WALSFGSCLGGNLSILGSATNVVAVGAADKAGCKIKFVQFLKFGGIIAIENLIIASIYVY FRYL >gi|292606553|gb|ADGG01000057.1| GENE 6 5388 - 6323 1135 311 aa, chain - ## HITS:1 COG:FN1926_2 KEGG:ns NR:ns ## COG: FN1926_2 COG0517 # Protein_GI_number: 19705231 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Fusobacterium nucleatum # 146 311 2 167 167 281 91.0 1e-75 MKFSSYLNTDYIFPNLEASSKEEIIRKIVSKVAEDDRVVGEQKNEIIKNILKREEEISTC IGGGIFLPHTRMIDFSDFIIAVATVKDKIVSDIGGTNETDEIKVVFLIVSDVLKNKNLLK AMSVISKIGLKQPEVIEKIKKSNSPKEIYELLAANDIELEHKIIAEDVLSPEIRPAKEND TLAEIAKRLILEQKSALPVLSEDNILLGEITERELIGFGMPEHLSLMSDLNFLTVGEPFE EYLLNESTMTIKDIYRKDIKHLMIDKDTPIMEICFKMVYKGMHRLYVVNPKNNKYLGIIN RSDIIKKVLHI >gi|292606553|gb|ADGG01000057.1| GENE 7 6436 - 6681 513 81 aa, chain - ## HITS:1 COG:no KEGG:FN0683 NR:ns ## KEGG: FN0683 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 81 1 81 81 154 98.0 1e-36 MHDGCSGKFDDGMQVLAKLRMMGFSKQDMPFPMTFTCKECGEEITMTTFEYECPHCSMIY AVTPCHAFDVENILSAGKAKK >gi|292606553|gb|ADGG01000057.1| GENE 8 6863 - 8563 2581 566 aa, chain + ## HITS:1 COG:FN0684 KEGG:ns NR:ns ## COG: FN0684 COG1151 # Protein_GI_number: 19704019 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Fusobacterium nucleatum # 1 566 1 566 566 1109 94.0 0 MDKMFCYQCQETAKGTGCTTIGVCGKDAETSGLQDLLIHIDKGVAAYSSVLRKNGKAKEL IEGKVNRYLINSLFITITNANFDDDAILDEIKAGLKLREELKALATEEEKKEAEKYGTDL VNWYYESDEDLIKFSENQSVVGVLRTENEDVRSLRELIVYGLKGLAAYAEHAFNLGKTSE EIFAFVEEALLGTMDDSLTAEQLVALTMKTGEYGVKVMALLDEANTSVLGTPEITKVKIG AGKRPGILISGHDLWDLKQLLEQSKDSGVDIYTHSEMLPGHGYPELKKYSHFYGNYGNAW WDQRKDFTNFNGPIVFTTNCIVPPVKNATYKDRVFTTNAAGYPGWKRIKVNADGTKDFSE IIELAKTCQPPVEVESGEITVGFAHNQVLSLADKVVENIKSGAIKRFVVMSGCDGRMSQR HYYTEFAENLPKDTIILTSGCAKFKYNKLNLGDINGIPRVLDAGQCNDSYSWAVVALKLK EVFGLNDINELPLVFNIAWYEQKAVIVLLALLYLGVKNIHVGPTLPGFLSPNVAKVLVEN FGIAGITTVEEDLKKFGLYEGSALAN >gi|292606553|gb|ADGG01000057.1| GENE 9 8690 - 9721 1128 343 aa, chain - ## HITS:1 COG:FN0092 KEGG:ns NR:ns ## COG: FN0092 COG1454 # Protein_GI_number: 19703444 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Fusobacterium nucleatum # 1 343 29 372 372 580 86.0 1e-165 MIVTDEVMTQLKLTDFITNNLSSSTEVKIFNKVEPNPSMQTIENGLKDFIDFEPQCVIAL GGGSPIDACKAILYFAYELYKKLKVNKKVFFIAVPTTSGTGSEVTSYSVVTKGEHKIALA DEKMLPDVALLNTVFLNGLPAKVVADTGMDVLTHSIEAYVSTNANPFSSSFAMKSIKLIF ENLVAHYNDRKIQGPKENVQFASCLAGIAFDNSSLGINHSIAHTVGAKFHIAHGRANAII MPYVIEVNTEANRKYFEISRELGLPSDTIEEGKYSLLSFVRILKEKLAIEKSLKDYGVDF EAFKREIPSMLEDIKKDICTQYNPNKLTDEEYIRLLLKIYFGE >gi|292606553|gb|ADGG01000057.1| GENE 10 9823 - 10923 1402 366 aa, chain - ## HITS:1 COG:no KEGG:FN0091 NR:ns ## KEGG: FN0091 # Name: not_defined # Def: phosphoserine phosphatase (EC:3.1.3.3) # Organism: F.nucleatum # Pathway: Glycine, serine and threonine metabolism [PATH:fnu00260]; Metabolic pathways [PATH:fnu01100] # 1 366 1 366 366 587 83.0 1e-166 MSIENSCVRLDEGRWNPKNREVLEKLIEKYRNTNSYAVFDWDNTSIQGDTQQNLFIYQIE NLKYKLNPEKFNEVIRKNVPTTDFDERFKNSEGEVLNLTKLANDIYKNYIFLYENYISTK KISLEEIRETEEFKDFRAKMHYLHNALPSNFSSKIACLWEFYLLSGMTRTEVKSLAKESN DAKLGESLGEIIVESSRVLTGEAGIVRGIYDNGLRVRSEMANLYHELKRNGIDVYVISAS MQELIEVFATDKSYGYNLDEEKIYAMRLKISADDVLIDEFNEDYAFTQKEGKSETIERFI KDKYEGKGPILVGGDALGDESMLTKFKDTEVLLIMKREGKLDNLVNDERALIQHRNLQTG LLDPKN >gi|292606553|gb|ADGG01000057.1| GENE 11 10945 - 11382 553 145 aa, chain - ## HITS:1 COG:FN0075 KEGG:ns NR:ns ## COG: FN0075 COG4917 # Protein_GI_number: 19703427 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Fusobacterium nucleatum # 1 145 1 145 145 224 83.0 5e-59 MKKTMLIGRTGCGKTTLTQKLMNEEVKYKKTQSVTYKSKIIDTPGEYVENKMFYKSLLVL SADAKVIVLVQSAIDGATLFPPRFSTMFPRKEVIGVITKTDLENANIERSRKFLIEAGVT EVFTIGLEDSEGLEEIRKRLVVDES >gi|292606553|gb|ADGG01000057.1| GENE 12 11385 - 11726 487 113 aa, chain - ## HITS:1 COG:FN0074 KEGG:ns NR:ns ## COG: FN0074 COG4810 # Protein_GI_number: 19703426 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Fusobacterium nucleatum # 1 113 10 122 122 191 96.0 3e-49 MEKQRTIQEYVPGKQVTLAHLIANPDRDMCIKLGLDEEKTNAIGILTITPGEAAIISADI AIKSGSIELGFLDRFSGTLLLTGDFASVESSLKAVLAFLQETLKFYICEITRS >gi|292606553|gb|ADGG01000057.1| GENE 13 11728 - 12555 1185 275 aa, chain - ## HITS:1 COG:FN0073 KEGG:ns NR:ns ## COG: FN0073 COG0294 # Protein_GI_number: 19703425 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Fusobacterium nucleatum # 1 275 3 277 277 455 86.0 1e-128 MKKISCGKKEIILGERTLIMGILNVTPDSFSDGGKYNSLDAAMKQAEKLIADGADIIDIG GESTRPGHTQIAVEEEISRVVPIIEKISKELNTIISIDTYKHEVAKEAVKVGADIINDIW GLQYDRGEMAKFIEECNLPLIAMHNQNDEVYNKDIMLVLREFFEKTYKIADEYGIDRNKI ILDPGLGFGKNSEQNIEVLSRLDELNDMGPILLGASKKRFIGKLLNDLPFDERVEGTVAT TVIGIQKGVDIVRVHNVLENKRASLVADGIYRKRG >gi|292606553|gb|ADGG01000057.1| GENE 14 12542 - 13360 626 272 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 268 1 269 278 245 45 3e-64 MDKIYIRDLEFIGYHGVFEEEKKLGQKFYLSLELSTDLREANDDITKTTHYGEVAETVKK IFFQKKYDLIETLAEDIAREVLLSFPLIKEVKLEIKKPWAPVGLPLKDVAVEITRKWNEV YLSLGSNMGNKKENLEKAIKEVSKIRDTFIIKESKIIETEPFGYKEQDDFLNSCIGIKTL LTAREVLTELLAIEIRMGRERKIKWGPRIIDLDIIFYNKEVMEEDDLIVPHPYMEYRDFV LKPLEEIIPNFVHPLLSKRINALRKELENEKN >gi|292606553|gb|ADGG01000057.1| GENE 15 13553 - 14104 566 183 aa, chain - ## HITS:1 COG:FN0071 KEGG:ns NR:ns ## COG: FN0071 COG0302 # Protein_GI_number: 19703423 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Fusobacterium nucleatum # 1 183 5 187 187 322 89.0 2e-88 MDSKRIENAFLEVVEALGDVEYKAELKDTPKRIADSYKEIFCGIGIDPKEVLTRTFDINN NELIMEKNIDFYSMCEHHFLPFFGTICIAYVPNKKIFGFGDILKLIEILSRRPQLQERLT EEIARYIYELLDCQGVYVVVEAKHLCMTMRGQKKENTKILTTSAKGIFESDINKKLEVLA LLK >gi|292606553|gb|ADGG01000057.1| GENE 16 14115 - 16178 2652 687 aa, chain - ## HITS:1 COG:FN0070 KEGG:ns NR:ns ## COG: FN0070 COG0751 # Protein_GI_number: 19703422 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Fusobacterium nucleatum # 1 687 1 686 686 1046 83.0 0 MKLLFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVAD MQEDLDELNIGPSKDRAYKDGELSKAGEGFLNAYKIDESQIEIVKNDKGEYIAFKRFAKG EATEKLLPEILKELVLEETFPKSMKWSDKTLRFARPIEWFLALYGNNVVEFEIEGIKSSN KSKGHRFFGKEFEVISVEDYFNKIRENNVIIDISERRKMIEEMINKALLEDEKADIDEGL LDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILDKKGKLLPKFIVIRNG IDFSQNVKEGNEKVLSARLADARFFYQEDLKIPLDQNVEKLKTVVFQKDLGTMFSKVKRT EKIAEFLIGKLKYNYMKADILRTVKLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEI GVAIGIKEHYYPRFQGDLLPSGIEGIITGLSDRTDTLVGCFGVGLIPTGSKDPFALRRTA LGIVNIIINANINISLKELVKVSLDALEADKVLKVDRAKVEADVLEFLKQRMINVFTDMD YRKDIVLAVLDRDADNITNALEIVKVISEKLALNKLEDLLQVAKRVTNIITKGNNNVTVK EKLFKEEIEKTLYAETKKVGEEAEKSVKENEYADYFEKMVSLAPTIDKYFETVIVMDEDK NVRENRINQLTYIKNLFDRIAYLNKID >gi|292606553|gb|ADGG01000057.1| GENE 17 16455 - 17327 1215 290 aa, chain - ## HITS:1 COG:FN0069 KEGG:ns NR:ns ## COG: FN0069 COG0752 # Protein_GI_number: 19703421 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Fusobacterium nucleatum # 1 290 1 290 290 593 97.0 1e-169 MTFQEIIFSLQQYWSSKGCIIGNPYDIEKGAGTFNPNTFLMALGPEPWNVAYVEPSRRPK DGRYGDNPNRVYQHHQFQVIMKPSPTNIQELYLESLRVLGIEPEKHDIRFVEDDWESPTL GAWGLGWEVWLDGMEITQFTYFQQVGGLELDIVPVEITYGLERLALYIQNKENVYDLEWT KGVKYGDMRYQFEFENSKYSFELATLDKHFKWFDEYEEEAKKILDQGLVLPAYDYVLKCS HTFNVLDSRGAISTTERMGYILRVRNLARRCAEVFVENRRALGYPLLNKK >gi|292606553|gb|ADGG01000057.1| GENE 18 17329 - 17787 469 152 aa, chain - ## HITS:1 COG:FN0068 KEGG:ns NR:ns ## COG: FN0068 COG0597 # Protein_GI_number: 19703420 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Fusobacterium nucleatum # 1 152 14 165 165 212 88.0 2e-55 MIYIFLFLILLIIDQYSKLIVHSTLYVGDTIPIIDDFFNLTYVQNRGVAFGLFQGKIDIV SILALIAIALILFYFCKNFKKISFLERIAYTMIFSGAVGNMIDRLFRGFVIDMLDFRGIW SFIFNFADVWINIGVILIIIEHLIFNRKKRGK >gi|292606553|gb|ADGG01000057.1| GENE 19 17796 - 20597 4300 933 aa, chain - ## HITS:1 COG:FN0067 KEGG:ns NR:ns ## COG: FN0067 COG0060 # Protein_GI_number: 19703419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 933 1 933 933 1826 94.0 0 MNEKEYTSTLHLPKTDFQMKANLPNKEPKYITKWTEEKIYEKGLEKNKNGESFILHDGPP YANGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGLAKAREM SPLEIRKRCEEYARKWVGIQKEQFIRLGVLGNWDNPYLTLDPKFEAKQLELFGEIYEKGY IFKGLKPVYWSPATETALAEAEIEYYDHTSPSIYVRMQANKDLLDKIGFNEDAFVLIWTT TPWTLPANVAICLNENFDYGLYKTEKGNLILAKDLAESAFKDIGIENAELLKEFKGKDLE YATYQHPFLERTGLVILGDHVTADAGTGAVHTAPGHGQDDYVVGLNYKLPVISPIDHRGC LTEEAGDLFKGLVYSEANKAIIKHLTETGHILKMQEINHSYPHDWRSKTPVIFRATEQWF IRMEGGDLREKTLKVIDEINFIPAWGKNRIGSMMETRPDWCISRQRVWGVPIPIFYNDET NEEIFHKEILDRICGLVREHGSNIWVEKTPEELIGEELLVKYNLKGLKLRKETNIMDVWF DSGSSHRGVLEVWEGLHRPCDLYLEGSDQHRGWFHTSLLTSVASTGDSPYKSVLTHGFVN DGEGKKMSKSLGNTVAPSDVIKVYGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIR NTARYILGNSYDFNPKTDKVAYKDMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIH YFAAIDMSAFYLDIIKDRLYTEKKDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWE NLPAEAREAESVFLADWYVNNDEYLNPELDEKWQQIIKLRKEVNKKLEKARQGENKIIGN SLDAKVSLYTEDNALKEFIKENLELLETVFIVSDIEVADTSDDNFTAAEEIENLKIKITH ADGEKCERCWKYDDLGTDPEHPTLCPRCTGVLK >gi|292606553|gb|ADGG01000057.1| GENE 20 20594 - 23011 1990 805 aa, chain - ## HITS:1 COG:FN0066 KEGG:ns NR:ns ## COG: FN0066 COG0642 # Protein_GI_number: 19703418 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 69 805 1 737 737 1051 81.0 0 MFIKKDSLLLRIISYNGIAIIIVASIMATLFGIMIFNELNMRLLDKSRERTLLVNKAYLY YIDKSREHLYDASNDAVNLILVDSNDKLIQNRLASAVKNQLGIESYSLYGKSFIQILSPQ RIVLGESGDRDIKYDLYKNSNIIPSKEFLETQKFEYVSTKDALYIRLVQPYRLYNSTERN YIILTFPITNYSLTEIKDYAYLSAEDKIFILSKDGFTFGEISLEKSDDFFKNFKFNKVGR ELSDNKYYFSEKKIDDDYYYLGMLALQNKKGNDYIGDIGVAVSKNEFVVVKYMLATIILV VCLLAVVLSTALCARIFTKLLAPLNALAGKTEKIGLDIKKDRNGIDFGEENIFEIRSISN SIKFMAERIEENEKLLIQKNNKLNTNLNRLIAVEKLLTSISLRDNFSEGLDEVLRTLTSE EGLGYSRALYLGYDEDKEELSVTKYAINSHIEMNMEKYTEGINGFKFQVNSIKELIPLLN IEYEPGGMFWESMENSKIIYHNDKGFKYTYGNKLFRTLGLNNFMILPIADEDIKIGCILV DYFGKNNLISEEEVEVNSLLLMNLLTRIKNIILGESKLMKERYLTMSKVSDKFIKDNKKL IRNIESFIEKLENNRYNSKDIEKIKRYLKDEKKKNIVIKDSLDNSKSHFKVFNFEKLIEK IVNNSERILRKYGINISLFIDFSGNMYGDKKRIYQMFIQILRNSINAILTRNKLDKKINI VVVGDKNNRIILEIIDNGVGMTAEEVKAVMRPYSEVTGNSIMGTGLITIYKIVKEHNGFM SISSELDVGTKIRIIFNEYREETNQ >gi|292606553|gb|ADGG01000057.1| GENE 21 23031 - 25232 1699 733 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 11 730 2 720 764 659 48 0.0 MIINKKCKGYAMEKIYKIVAEELKIPVDKVENTIKLLDDGATIPFVARYRKEITGNLDEV QIGDILQKVEYLRNLEERKEEVIRLIEEQGKLTDELRNSIVEAKILQEVEDIYFPYRKKK KTKADIAKERGLEPLAEKFYTANNLEEIQNLAKDFITEEVPTVEDAIEGAMLIIAQNISE KAEYRERIREIYLKSSIIEAKASKKAVELDEKKVYNDYYEYSEKIEKMASHRILAVNRGE KEDILTVHLRLEDSDREKIENMILKEFPKNDLVATYKEIIKDSLDRLIIPSIEREVRNAL TERAEIESIAVFKDNLKNLLLQAPLKEKNVLALDPGYRTGCKVAVIDKYGFYRENTVFFL VEAMHNPKQIEDAKKKFLALVKKYEIDIVSIGNGTASRETETFVANIIKENKLNLKYLIV NEAGASVYSASKIAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVN QSKLDESLDNVISHVVNNVGANINTASWALLSHISGIKKTVAKNIVEYRKENGNFKNRKE ILKVKGVGPKAYEQMAGFLVIPEGENILDNTVIHPESYAIAEALLEKIGFSLEKYNNELN EARERLKSFDYKKFAEENNFGAETVKDVYEALLKDRRDPRDDFEKPLLKSDILNIDNLEV GMELEGTVRNVVKFGAFVDIGLKNDALLHISEISNKYIDDPSKVLAVGQIIKVRIKDVDK DRGRVGLTKKEQN >gi|292606553|gb|ADGG01000057.1| GENE 22 25352 - 28348 3905 998 aa, chain - ## HITS:1 COG:FN0417 KEGG:ns NR:ns ## COG: FN0417 COG3587 # Protein_GI_number: 19703759 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Fusobacterium nucleatum # 1 997 1 997 997 1526 85.0 0 MKIKFEENLEYQLEAVNSITDIFSGQEIAKTVFTVEKTNNLQLSITINENELGAGNKLSL LPEDVLKNLNNIQTRNGLAKTDKLVKSDYNFSIEMETGTGKTYVYLRTIMELNKKYGFTK FIIVVPSLAIKEGVYKTLQITEEHFKSLYENTPYDYFIYDSKKINMIRNFAVNDNIQILI INIDSFNKDTNIINQERDQANGYRPIDYISQCDPIVIVDEPQNMESEIAKKAISELNPLC TLRYSATHKEKYNPVFKLDSIAAYEKKLVKQIEVATVGVTKNTNTEYIKVVNIKASKTGV TAKIELDIKNKSGITRKEISIKHGDILSEKAKRDIYDGYIVNEITYNEAEPSKSFIDFGK VRLTVGQVNGGQDPDVIKRAQIRKTIQEHFEKQLALKAKGIKVLSLFFIDRVANYRTYDP ETGEAKKGKYALMFEEEYDALIKSEKYLGFGNASTAHDGYFSADKKKTKSGVEYNEFKDT KGNTNADNDTFTKIMKDKERLLSFDEPLAFIFSHSALKEGWDNPNVFQICTLNETSSEMK KRQEIGRGLRIAVNQEGERVRGFDVNTLTVMANEAYEQFVDSLQKEMEKEENIKFGVVED FVFTNIVIKIENGKEVYLGHEKSKEIYEDLIRREYIDENGNVKEKLKRDLDEGKLELAEE FKDIKESIFKKLKSTTGKLVIKNADERKKINLNKEVFLSEDFKELWDRVKYKTTYQVNFN SEKLINECIKNLDEGIYIPAEKLIYDKKKIAITKGGIEETGAYEIEENLEITTKYKLPDI ITYLQNETNLTRKSIVNILTNSKTLDSFKKNPQSYLEQAANIIKGSMKAFIVDGIKYEKI GDVEYYSQELFKNSEIFGYLKDEMSKQGNMVETGKTPYSSIIIDSEVEREFAEGLEKNGN VKVYTKLPDWFKIPTPLGYYNPDWAILVKDENKEEEKLYFVIETKGSTDKDKRRDVENLK IDCGKKHFEALQVDYADCVNINDFKKEIDKVKEKNQNN >gi|292606553|gb|ADGG01000057.1| GENE 23 28358 - 30148 1792 596 aa, chain - ## HITS:1 COG:FN0416 KEGG:ns NR:ns ## COG: FN0416 COG2189 # Protein_GI_number: 19703758 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Fusobacterium nucleatum # 76 596 1 525 525 553 62.0 1e-157 MWGGVQKLEDSKERYSLTWNGKARARQIAQEVSTGTLRPSKEESKNWDNTGNIYIEGDNL EVLKLLQKSYHGKIKMIYIDPPYNTGKDFVYKDNFTDNIENYKEITGQINKEGIKLTTNT ETNGRYHSDWLNMMYPRLKLARNLLTDDGVIFISIDENEVANLKKLCEEIFGGENFVACC PRKTRGSATTKSDAELQKLHDYLLIFWKNKSISKFKLKNIGQKEYPYTDERGDFYIVPLQ DNGPHGTKTARPNLFYPIYYNKSTDIFSLDEKKGDIVFVPKKHKNDDGTWMWSKAKFIKD SRDLYLKNDQIYIKHYYDENEDQNRYQRNKSFLDEFQNTTGTKILNTLFENNGIFDNPKP IKLLEWCLNLSVDKDSIILDFFSGSSTTAHSVMQLNAEDGGNRKYIMVQLPELCDEDSEA YKAGYKNICEIGKERIRRAGEKIKSDESLPIENREKLDVGFKVFKLDSSNIKEWDTDTEN LQQSLLDSIENIKRDRNTLDVLYEILLKYGLDLNIPIEENKNFYSIGGGSLLVSLNKEIN NEVINSICEEYKKLQEIDKEFKTTVILRDNSFKDDEVKTNAIKKLEQVGINEIRSI >gi|292606553|gb|ADGG01000057.1| GENE 24 30124 - 30270 194 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237740847|ref|ZP_04571328.1| ## NR: gi|237740847|ref|ZP_04571328.1| type III restriction system methylase [Fusobacterium sp. 4_1_13] # 1 47 1 47 48 73 82.0 3e-12 MEKLNGTSMDLIQENVKKLKEIFPEIFIEGRIDFDLLRQICCGGGYRN >gi|292606553|gb|ADGG01000057.1| GENE 25 30408 - 31304 1050 298 aa, chain - ## HITS:1 COG:lin2373 KEGG:ns NR:ns ## COG: lin2373 COG4823 # Protein_GI_number: 16801436 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Listeria innocua # 17 296 6 288 298 125 34.0 1e-28 MNDIEKIAINTRSNVVKKPTTIEEQIELLKSREVAIEDESFAKKFLRIHNYYSVTGYLHP YKTIDGKYKNISFNEIAIQIRFDMRLREICMYALDIIEKGLKTIIAYEFSHNYENGNIAY AYSLYFPNDIDKHTRLMGHYNISLNNNKELPYVKHNMKTYGILPTWVAIELFTLGNIEKF FSMLDTNTKKKIESIIGFPKNKIQNWIENLRIFRNMVAHNQRLYNFSILSMPKKAKEYNK QTGKIFDYVIVMKYLFLDVEDWNTYVLPRFEYIFDDFKDNIDLKCIGFPDDWKNILTK >gi|292606553|gb|ADGG01000057.1| GENE 26 31668 - 33551 2039 627 aa, chain - ## HITS:1 COG:FN0416 KEGG:ns NR:ns ## COG: FN0416 COG2189 # Protein_GI_number: 19703758 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Fusobacterium nucleatum # 118 627 1 525 525 561 63.0 1e-159 MEKLDGTSMNLVQENVKKLKEIFPEIFTEDQVDLDLLGELLSNGEEYRKLNTSKERYSLT WNGKSKARQITQEVSTGTLRPAKEESKNWDNTENIYIEGDNLEVLKLLQKSYHGKIKMIY IDPPYNTGKDFVYKDNFTDNIENYKEITGQTNKEGTKLTTNTDTDGRYHSNWLNMMYPRL KLARNLLTDDGVIFISIDDNEQANLKRLCDEIFGEENFIADFIRKTKSTTNDAKTGINYQ HEFLICYSKNFQYVNLLGGEKNLENYSNPDSDPKGDWISDNPSAKSGSMENNYFSIKNPY TGKEDYPPVGNYWRFSKNTIQRYIDEGYIVFKKEHKANERGFIFKRYKNELKTLKQTFDS LFFVDNLFMNQKATKELLELKLAEYFLYPKGVKFLKKILLHSTEKEDIILDFFSGSATTA HSVMQLNGEDGGNRKYIMVQLPELCDEDSEAYKAGYKNICEIGKERIRRAGEKIKSDESL PLENREKLDVGFKVFKLDSTNIKEWDTDTENLQQSLLDSIENIKSDRNTLDVLYEILLKY GLDLNIPIEENKDFYSIGGGSLLVSLNKEINNEVINSICEEYKKLQEIDREFKTTVILRD NSFKDDEVKTNAIKKLEQIGISEVRSI >gi|292606553|gb|ADGG01000057.1| GENE 27 33566 - 34252 728 228 aa, chain - ## HITS:1 COG:no KEGG:FN0415 NR:ns ## KEGG: FN0415 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 228 3 230 231 256 82.0 6e-67 MEIFNLPNECKIDKNIPKEMIYKNAEANEKLKRVFIDTVEKIRFMYLLNFSNSNIQNYIN DKERFEEIDFIKIILREKGKENVISKLFHQLIPKSTVIILEFKTEILISTSNKKIEKERV IVEEVFNSNWIDIENKMLKELEYKKLNSTNLKLFYEDIIEKVRIINLSKKLNSESNIERE NLELLEKLNKEIEELKTLRKKETQLNRIAEIQTKIVKKIKERDSILKK >gi|292606553|gb|ADGG01000057.1| GENE 28 34261 - 37479 3274 1072 aa, chain - ## HITS:1 COG:FN0414 KEGG:ns NR:ns ## COG: FN0414 COG0553 # Protein_GI_number: 19703756 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 59 1072 1 1014 1014 1650 89.0 0 MEYGILDNKTQGKVIDKLKEDLKSGTKVSIISAYFTIFAYQELRKELNKIDSLRLLFSMP TFVENKKDINREFKLSGSYESGLAGDRYEMKLKNELKQSEIAKECAEWIRKKVEVRAYDE EHALPQKMYIMEQNDGEDSYIFGSSDFTSSGLGVVSSNKSEMNTYMKDTTSTQAMLNLFN KAWNDNEKVKDVKKALLESLEVVYRENTSEFIYFVTLYNIFKDYLSDLTEEEIVKSKTGF KDSVVWNKLYNFQKDGVLGAIDKLEKYNGCILADSVGLGKTFEALAIIKYYELRNNRVLV LCPKKLRENWLVYRGNRRDNILGEDRLNYDVLNHTDLSRYTGHSGDINLEEVYWENYDLI VIDESHNFRNNNNSKENKETRYSRLLNQIIKKGVKTRVLMLSATPVNNRMNDLKNQIAFA TEGNDKALSADGIKSIEQTLRKAQMAFNKWNDLEEEDKSVESLLEMLEVDYFKLLDMLTI ARSRKHIQKYYDTTSIGKFPERLKPINVKADVDTKNDFIKLAELNKLIKSLNLAIYSPMK YVLPSKVEQYSKKYDTNMGKTVFKQTDREESLVHLMRINILKRMESSIHSFAITVLKILK NIEGILEKINTFEDFVEDFDIEELDIEDNRLDGVLIGSKNVKIHLKDIDKIRWESELEAD KVILEKILKEANKITVERDKKLVELQELIKQKVENPLNKKNKKIIIFTAFADTAKYLYNN ISTYILDELGLYSALVTGSDNPKTNLKGVKTEFNNILTNFSPRSKERRDKDKPEIDILIA TDCISEGQNLQDCDYLINYDIHWNPVRIIQRFGRIDRIGSQNEVIQLVNFWPNMELDEYI NLESRVSGRMVMLDMSATGEENIIEEKTTMNDLEYRKKQLKQLQDQVPDIEDINGNISIT DLSFNDFKMDLVNYMKNHKELLEKAPTGMYAIAKSNIDEAVKGVIFCLKKINQNIKPSEY NTLNPYFFVYIKDDGEILLNFIQSKKILDIYKKVCSGQNELYTELIKEFNQETNNAKDMK KFTDFLEKTVENIVGKEEEKGMESLFSFDKTTLSKSVQNMDDFELISFLVIK >gi|292606553|gb|ADGG01000057.1| GENE 29 37625 - 38326 681 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783865|ref|ZP_06749187.1| ## NR: gi|294783865|ref|ZP_06749187.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 8 233 1 226 226 337 100.0 5e-91 MKEDDRIMVDYRSILVERMEYKDSILYLYCRTFYKVVGDGEYNKYDYRLYHRKVLKFKNV KRFEYYSSDEVYYHFLNELEDLRAELGIPYFRKIFNRSKKRNKLFISGMGYFDNFIAIEF KDDKKEKIVIDEKEKYLEIKKELLKILQSKKEKFKENNIKVEVIEEEEDSYIISLDDNKK FIKIALNIPDSTRYYYIKFSEKRIGWGEYVWYDEEYHTVSEIAEQLNIILDRF >gi|292606553|gb|ADGG01000057.1| GENE 30 38313 - 38681 587 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783866|ref|ZP_06749188.1| ## NR: gi|294783866|ref|ZP_06749188.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 122 1 122 122 172 100.0 6e-42 MEVRYDVYLEDENENEDDFDAPMKRLELIFSHITEEEKEILEKYDFKHEYTKDNKIKLID EDCAIYYTIEIDGEDKGIYLEKTKTYYNYFKYDFISRENERTKNLVISKEGVRVEIIFNE RR >gi|292606553|gb|ADGG01000057.1| GENE 31 38703 - 39047 552 114 aa, chain - ## HITS:1 COG:no KEGG:Lm4b_00493 NR:ns ## KEGG: Lm4b_00493 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_Clip81459 # Pathway: not_defined # 5 113 2 109 115 62 35.0 7e-09 MELKEQEKFLRIKKEVIKMIENKKEKLKENNIKIDIISDIMNDEENYYILDFESDKGVAR LEITTPHFAPYYYACFNILWLNDDEPYWWLDEENRTVTDILKNLEKSLTYFINS >gi|292606553|gb|ADGG01000057.1| GENE 32 39056 - 39559 359 167 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1945 NR:ns ## KEGG: CCC13826_1945 # Name: not_defined # Def: carbon monoxide dehydrogenase 1 (CODH 1) (EC:1.2.99.2) # Organism: C.concisus # Pathway: not_defined # 1 167 1 160 168 82 35.0 5e-15 MKTYVLDILENILNEEQANQYYYKAFIKMNKREKIPYIVNENRYLRFLLRLYKIDKNIVY KFRFFEKWCFDFLSNSEKLHYKNSIKKLRRKALDKKKFLNKDKDILEMIFKMSFRDVFGF QKNYRIYFSNLKILITSLTDYYYFITFLDKDEERVKNLVKKSKLFLR >gi|292606553|gb|ADGG01000057.1| GENE 33 39562 - 40656 1080 364 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783869|ref|ZP_06749191.1| ## NR: gi|294783869|ref|ZP_06749191.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 364 1 364 364 573 100.0 1e-162 MKNFELKPIYYPKSSYLNYILEIWVDGVNISQFYEDNKLRIDVGYIFHIYNFFDDHLEDI IKEEVLPYEDVEGKTIFETIDNIKEKYFYWLKDDYEDDESDEEIEKIISISEPFYDWQRA HRWLLYGPFLCIPDIIFRRIGDTIEISWDTTWDITYQQRKYENENIKFISTKGVSYIDAD EFYLEIKKFLKKIDEISKIQNEKFHIIEKTGKLIYAKDSYNNIKFKEEKNFLKDLEKIGH KLFTIYELVLITEKDKKVVPIILKYLSKIEDENIKTHLAYFLAVKNYKEASEKLIKEFYK AKTDEYKIALSKALSTIYNKDILNELLEIVKNKEYKDVNFPIISTLNKYKNKRVKMLFEK NRIE >gi|292606553|gb|ADGG01000057.1| GENE 34 40656 - 41705 1159 349 aa, chain - ## HITS:1 COG:FN2119 KEGG:ns NR:ns ## COG: FN2119 COG2849 # Protein_GI_number: 19705409 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 9 326 4 324 338 204 42.0 2e-52 MRKKFRFCILFALIFLFNTLIANAEREIKYVDSEIRNGIIYSKNEKIPYNGLIKDYYKNG NVKIEWTIVNGAQNGVAKSYYEDGTLKSDSIFKNNKKTGIEKMYSFDGKLVAEVPYKDEI RDGIEKQYSKNGKIIIEISFKNGIEDGAFKQYYENGVLEIETFYKNGKLEGIWKDYSKDG KIENETSFKNGIENGTKKTFYKNGNLKYRVEIKNGIKEGAFKQYYENGVLEIEAFYKNDK LEGVKRDYYKSGKIENEISFKNGIKDGVFKQYYENGVLEIEAFYKNGKLEGLRRDYYKSG KLEVEGLQKNGKPDGWTYVYNEDGSLKREIFFVEGKVYEKDNDKRNKEN >gi|292606553|gb|ADGG01000057.1| GENE 35 41689 - 42624 921 311 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2020 NR:ns ## KEGG: Lebu_2020 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 300 1 312 321 124 35.0 3e-27 MEEILKNIKLGQIIGIYHFEDSCFTVGKISKIDSKYIYLLSYDVNFKEDGIKVFLIDSIK RIILRADYIKNLEKIQKKAFNIRCKNLFQKLIENKIKISIDLADGSVEEAYLTGKEENYF KFKILNDNQNIISEEVITKDYLKRIKISNYIEKEEYQKFKMIFTKNDDEYIAYDLSYNGN YLIFLEKEEFYDIAQINIIPKNMIDSISEIEVKLDVKKENFKDLIDFKKDLDIIEILRKC LENKFLIFIDNVDFFETKVGVITNLEDNKIKIKEIDKYGNFHKNSEIYLDEIQLLAIKNY KIMERDYEKKI >gi|292606553|gb|ADGG01000057.1| GENE 36 42729 - 44243 2088 504 aa, chain - ## HITS:1 COG:FN0803_2 KEGG:ns NR:ns ## COG: FN0803_2 COG0225 # Protein_GI_number: 19704138 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Fusobacterium nucleatum # 193 357 1 165 165 310 93.0 4e-84 MKKFILPLIFIFLIGTFVFAKMLSRNVSKETEAEKDLLESIQLVDMNGNDYTFSRGKNIY IKFWASWCPTCLAGLEELDRLAGENNSNFEVITVVFPGINGEKNPAKFKEWYDSLGYKNI KVLYDTDGKLLQIFKIRALPTSAIIYKDLKIDNVIVGHISNGQIKDYYEGKGENEVMEES KNTTVNNVNKENIKEIYLAGGCFWGVEEYFARIDGVIDSVSGYANGSFDNPTYENVCNNS GHAETVHITYDSSKVSLDTLLKYYFRIIDPTSVNKQGNDRGIQYRTGIYYQNDEDKQIAI NAIKEEQKKYSRPIVIEVEKLKRFDKAEEEHQDYLKKNPNGYCHINLNKANEAIIDEKKY QKPSDEVLKEKLTDLEYQVTQNAATERAFTHEYDKNQEDGIYVDITTGEPLFSSKDKYDA GCGWPSFTKPIATEVVNYKQDNSHGMSRVEVRSRAGKAHLGHVFEDGPRAEGGLRYCING ASLRFIPYDKMDEEGYGEFKKYVK >gi|292606553|gb|ADGG01000057.1| GENE 37 44267 - 44944 643 225 aa, chain - ## HITS:1 COG:FN0804 KEGG:ns NR:ns ## COG: FN0804 COG0785 # Protein_GI_number: 19704139 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Fusobacterium nucleatum # 9 225 2 218 218 288 87.0 5e-78 MPSRGRFRFTQEVAYSTAYLAGIASFFSPCIFPIIPVYISILSNGEKKSVSKTLAFVLGL SVTYIVLGFGAGFIGELFLNSKVRVIGGILVVILGLFQMDVLKLKFLEKTKVMNYEGEEQ SLFSTFLLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSL ASKTLFKKMSFIKKHLPLIKKIGGFLIIVMGFLLIFDKLNIFLTV >gi|292606553|gb|ADGG01000057.1| GENE 38 45040 - 45240 167 66 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 7 65 357 415 416 91 81.0 1e-17 MIKKILQEYVFSGKRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRGELNTP KRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 22:38:13 2011 Seq name: gi|292606552|gb|ADGG01000058.1| Fusobacterium sp. 1_1_41FAA cont1.58, whole genome shotgun sequence Length of sequence - 96412 bp Number of predicted genes - 87, with homology - 87 Number of transcription units - 40, operones - 25 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 70 - 213 125 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 - Prom 326 - 385 16.6 - Term 374 - 426 10.2 2 2 Tu 1 . - CDS 490 - 7536 10241 ## FN1554 hypothetical protein - Prom 7556 - 7615 11.9 - Term 7599 - 7637 -0.9 3 3 Tu 1 . - CDS 7785 - 8531 803 ## COG4912 Predicted DNA alkylation repair enzyme - Prom 8642 - 8701 5.3 - Term 8541 - 8583 6.2 4 4 Op 1 1/0.250 - CDS 8713 - 10284 1924 ## COG2385 Sporulation protein and related proteins 5 4 Op 2 . - CDS 10318 - 11055 1138 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase - Prom 11113 - 11172 11.7 + Prom 11058 - 11117 11.3 6 5 Op 1 1/0.250 + CDS 11151 - 11774 854 ## COG0406 Fructose-2,6-bisphosphatase 7 5 Op 2 . + CDS 11792 - 12244 534 ## COG0219 Predicted rRNA methylase (SpoU class) 8 5 Op 3 . + CDS 12289 - 13155 492 ## COG2990 Uncharacterized protein conserved in bacteria 9 5 Op 4 . + CDS 13228 - 14259 1361 ## COG2008 Threonine aldolase 10 5 Op 5 1/0.250 + CDS 14268 - 15134 249 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Prom 15232 - 15291 10.4 11 6 Op 1 26/0.000 + CDS 15315 - 16322 1623 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 16365 - 16398 4.0 + Prom 16330 - 16389 2.1 12 6 Op 2 . + CDS 16413 - 17609 1889 ## COG0126 3-phosphoglycerate kinase + Term 17642 - 17680 5.1 + Prom 17643 - 17702 3.5 13 7 Op 1 . + CDS 17723 - 18076 565 ## FN0655 hypothetical protein 14 7 Op 2 . + CDS 18092 - 18472 700 ## FN0656 hypothetical protein + Term 18475 - 18514 4.5 - Term 18466 - 18497 3.4 15 8 Op 1 . - CDS 18500 - 19279 946 ## COG2357 Uncharacterized protein conserved in bacteria 16 8 Op 2 . - CDS 19294 - 20148 849 ## FN0925 hypothetical protein - Prom 20176 - 20235 6.1 17 9 Tu 1 . - CDS 20268 - 21071 745 ## FN0924 hypothetical protein - Prom 21132 - 21191 9.7 + Prom 21096 - 21155 18.6 18 10 Op 1 1/0.250 + CDS 21224 - 22663 1204 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 19 10 Op 2 . + CDS 22676 - 23608 878 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 20 10 Op 3 . + CDS 23613 - 24527 1318 ## COG0501 Zn-dependent protease with chaperone function + Term 24543 - 24600 12.1 21 11 Op 1 . - CDS 24599 - 27433 3514 ## COG0178 Excinuclease ATPase subunit 22 11 Op 2 . - CDS 27513 - 28160 537 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 28287 - 28346 9.9 + Prom 28145 - 28204 8.3 23 12 Tu 1 . + CDS 28285 - 29049 893 ## COG0566 rRNA methylases - Term 29021 - 29059 7.3 24 13 Tu 1 . - CDS 29198 - 30097 1088 ## COG3023 Negative regulator of beta-lactamase expression - Prom 30188 - 30247 8.5 + Prom 30088 - 30147 15.0 25 14 Op 1 1/0.250 + CDS 30223 - 32148 2291 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 26 14 Op 2 . + CDS 32158 - 32625 326 ## COG1576 Uncharacterized conserved protein + Prom 32805 - 32864 11.7 27 15 Op 1 . + CDS 33046 - 34371 1512 ## FN0465 hypothetical protein 28 15 Op 2 1/0.250 + CDS 34393 - 35874 1881 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 35889 - 35921 2.5 29 16 Op 1 23/0.000 + CDS 35953 - 36309 274 ## COG1380 Putative effector of murein hydrolase LrgA 30 16 Op 2 1/0.250 + CDS 36309 - 37001 857 ## COG1346 Putative effector of murein hydrolase 31 16 Op 3 1/0.250 + CDS 37011 - 37619 849 ## COG3142 Uncharacterized protein involved in copper resistance + Prom 37642 - 37701 11.2 32 17 Tu 1 . + CDS 37870 - 39408 2017 ## COG2978 Putative p-aminobenzoyl-glutamate transporter + Term 39428 - 39466 7.2 + Prom 39446 - 39505 15.4 33 18 Tu 1 . + CDS 39535 - 40524 1434 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 40532 - 40591 14.4 34 19 Op 1 . + CDS 40724 - 41269 434 ## FN0184 hypothetical protein 35 19 Op 2 . + CDS 41294 - 41851 480 ## FN0184 hypothetical protein 36 19 Op 3 . + CDS 41881 - 42399 406 ## FN0184 hypothetical protein + Term 42478 - 42529 9.3 + Prom 42406 - 42465 6.0 37 20 Op 1 6/0.000 + CDS 42549 - 43979 2050 ## COG0579 Predicted dehydrogenase 38 20 Op 2 4/0.083 + CDS 43991 - 45256 2048 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 39 20 Op 3 . + CDS 45256 - 45600 442 ## COG3862 Uncharacterized protein with conserved CXXC pairs + Prom 45608 - 45667 10.7 40 21 Op 1 18/0.000 + CDS 45712 - 46443 1187 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 41 21 Op 2 1/0.250 + CDS 46510 - 48003 2300 ## COG0554 Glycerol kinase + Term 48011 - 48074 12.4 + Prom 48010 - 48069 7.1 42 22 Op 1 10/0.000 + CDS 48089 - 49075 1512 ## COG2376 Dihydroxyacetone kinase 43 22 Op 2 9/0.000 + CDS 49177 - 49833 989 ## COG2376 Dihydroxyacetone kinase 44 22 Op 3 . + CDS 49842 - 50246 607 ## COG3412 Uncharacterized protein conserved in bacteria + Term 50255 - 50296 6.0 - Term 50243 - 50283 2.0 45 23 Tu 1 . - CDS 50295 - 51578 1839 ## COG3681 Uncharacterized conserved protein - Prom 51605 - 51664 22.5 + Prom 51569 - 51628 10.6 46 24 Tu 1 . + CDS 51757 - 52926 1646 ## COG1301 Na+/H+-dicarboxylate symporters + Term 52943 - 52993 3.2 - Term 53006 - 53045 6.1 47 25 Op 1 . - CDS 53101 - 60747 10878 ## FN2047 hypothetical protein - Prom 60774 - 60833 11.9 48 25 Op 2 . - CDS 60849 - 62258 1270 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 62298 - 62357 9.7 + Prom 62268 - 62327 11.1 49 26 Tu 1 . + CDS 62365 - 63207 1468 ## COG0214 Pyridoxine biosynthesis enzyme + Term 63256 - 63313 14.1 50 27 Op 1 . - CDS 63322 - 63606 468 ## FN1972 hypothetical protein - Prom 63630 - 63689 12.0 51 27 Op 2 . - CDS 63717 - 64421 531 ## COG3619 Predicted membrane protein - Prom 64473 - 64532 13.2 52 28 Op 1 . - CDS 64577 - 64705 63 ## COG0716 Flavodoxins 53 28 Op 2 . - CDS 64765 - 65331 626 ## COG3548 Predicted integral membrane protein 54 28 Op 3 . - CDS 65347 - 66192 1190 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 55 28 Op 4 . - CDS 66203 - 67954 2726 ## COG1154 Deoxyxylulose-5-phosphate synthase - Term 68128 - 68164 -0.8 56 29 Op 1 . - CDS 68325 - 69485 950 ## COG0675 Transposase and inactivated derivatives 57 29 Op 2 . - CDS 69535 - 69696 184 ## gi|294783932|ref|ZP_06749254.1| transcriptional regulator, MerR family - Prom 69759 - 69818 11.2 58 30 Tu 1 . - CDS 69845 - 70648 1025 ## COG0501 Zn-dependent protease with chaperone function - Prom 70770 - 70829 11.2 - Term 70778 - 70810 4.0 59 31 Op 1 11/0.000 - CDS 70834 - 71052 351 ## PROTEIN SUPPORTED gi|197736537|ref|YP_002165315.1| ribosomal protein S18 60 31 Op 2 1/0.250 - CDS 71104 - 71421 527 ## PROTEIN SUPPORTED gi|237739059|ref|ZP_04569540.1| SSU ribosomal protein S6P 61 31 Op 3 . - CDS 71487 - 73190 2704 ## COG0442 Prolyl-tRNA synthetase - Prom 73321 - 73380 14.3 - Term 73320 - 73377 10.4 62 32 Op 1 . - CDS 73388 - 73837 495 ## gi|294783937|ref|ZP_06749259.1| conserved hypothetical protein 63 32 Op 2 . - CDS 73791 - 74081 320 ## gi|294783938|ref|ZP_06749260.1| conserved hypothetical protein 64 32 Op 3 . - CDS 74101 - 74541 478 ## Ppha_1743 protein of unknown function DUF1130 65 32 Op 4 . - CDS 74541 - 75173 629 ## Cbei_1525 hypothetical protein - Prom 75318 - 75377 10.4 + Prom 75282 - 75341 11.8 66 33 Op 1 8/0.000 + CDS 75448 - 75759 368 ## COG2739 Uncharacterized protein conserved in bacteria 67 33 Op 2 23/0.000 + CDS 75770 - 77104 1981 ## COG0541 Signal recognition particle GTPase 68 33 Op 3 . + CDS 77155 - 77418 434 ## PROTEIN SUPPORTED gi|237739055|ref|ZP_04569536.1| SSU ribosomal protein S16P + Term 77428 - 77475 9.5 - Term 77421 - 77456 1.7 69 34 Tu 1 . - CDS 77465 - 79042 1935 ## COG2461 Uncharacterized conserved protein - Prom 79126 - 79185 13.6 + Prom 79075 - 79134 8.5 70 35 Tu 1 . + CDS 79194 - 80570 1230 ## COG0534 Na+-driven multidrug efflux pump 71 36 Op 1 1/0.250 - CDS 80691 - 81461 1075 ## COG2849 Uncharacterized protein conserved in bacteria 72 36 Op 2 1/0.250 - CDS 81486 - 82793 1578 ## COG2849 Uncharacterized protein conserved in bacteria 73 36 Op 3 1/0.250 - CDS 82821 - 84413 1694 ## COG2849 Uncharacterized protein conserved in bacteria 74 36 Op 4 . - CDS 84429 - 85988 1516 ## COG2849 Uncharacterized protein conserved in bacteria 75 36 Op 5 . - CDS 86010 - 86924 1403 ## COG1897 Homoserine trans-succinylase - Prom 87114 - 87173 9.8 + Prom 87058 - 87117 10.5 76 37 Op 1 . + CDS 87162 - 87629 553 ## FN0234 hypothetical protein 77 37 Op 2 . + CDS 87665 - 88132 603 ## FN0234 hypothetical protein 78 37 Op 3 . + CDS 88185 - 88733 750 ## FN0234 hypothetical protein 79 37 Op 4 . + CDS 88770 - 89756 1129 ## COG4859 Uncharacterized protein conserved in bacteria + Term 89770 - 89813 4.5 - Term 89841 - 89870 -0.2 80 38 Op 1 1/0.250 - CDS 90025 - 91368 804 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 81 38 Op 2 . - CDS 91381 - 92109 1012 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 92272 - 92331 12.4 - Term 92287 - 92337 9.1 82 39 Op 1 . - CDS 92394 - 92996 854 ## FN1346 putative cytoplasmic protein - Term 93002 - 93049 3.3 83 39 Op 2 1/0.250 - CDS 93059 - 93760 969 ## COG1359 Uncharacterized conserved protein 84 39 Op 3 36/0.000 - CDS 93792 - 94463 309 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 85 39 Op 4 . - CDS 94472 - 95677 1549 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 86 39 Op 5 . - CDS 95681 - 96010 399 ## FN1350 integral membrane protein - Prom 96090 - 96149 4.1 - Term 96059 - 96103 -0.9 87 40 Tu 1 . - CDS 96185 - 96412 305 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein Predicted protein(s) >gi|292606552|gb|ADGG01000058.1| GENE 1 70 - 213 125 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 1 47 43 89 89 89 93.0 5e-17 MRHVLVGYELHEDFSKHIGKLVCRHGAKPCNKETELLGTLKASITTT >gi|292606552|gb|ADGG01000058.1| GENE 2 490 - 7536 10241 2348 aa, chain - ## HITS:1 COG:no KEGG:FN1554 NR:ns ## KEGG: FN1554 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 794 2348 1 1582 1582 1035 46.0 0 MGGGVDYMNNNLYNVEKNLRSIAKRYENVKYSVGLAVLFLMKGTSAFSDDNMIQETEKQK DILIDVKKGKSQLKEKKTITQKTQKLKASWTSMQFGANDLYSNFFATPKTDIEKTTIVKN EKTVLVASADNSTSLPMFAKLSSDIEKTSTPTTEEINTSKENLRNSVGNLQNKIDIARKE NSKEIEGLKLELVQLMEQGNQVVKSPWSSWQFGANYFYDNWGSAYKGRGDKKAEIYNLQR DNTMKRFVYPTSGASSSSVKYGLTDLSIEEEEKSKIIVNAAIRPKLIDKEPPKLQLPTVT APNSRALGLTLSSPKVIQISSVKAPDMDISIVNPNASPFSDFFWGWLEGVSIAAAHINDE SRPVWKEARRPMMQNIDITGGVFWSGVKPDGTAFEGSGFSGASQDTTVHNAVNFTSSKNY DKRHQTIINSYDGRWSGRPGNKITGGSYYVRGRDNTPTAQGVGFVSGKGTGTAAFHIVGD VEIKNVTVNLYNRAAFINAEAFRGGSVKMENVTINILEDSNTVFNIQGKGDGAYQDSKYF SGGKFSTSLTGDANIRVGTKDNTIYAMKNYAGGLRIENKGEIIFDGASNIGFSVLTWVPD KSKYIAVEYPTYTNGGNQGEGSLDKYIPYIKLSADKPMKFYGDENVGIFFNTKNDNIAHN KGIHQGYFELYFDIGSKLDFDSSAVQKEAGRLNKVGYTSTTVDGNVGVYAISGQRQGVDY NSLAKSSVRYNVTDTATTKPYLNFLEKDPIHNLNFDKFNITFGKYAKNGFMFLAKNGTVI DIQAGAQSDFSDGINGTNTLEADTGAKTIIAYAEGKWTANGTGLTELTGTDLENKPTEII VDKKLHMVSKEGVAFFAKDGGKITVKKDAEARGYKSVLAYAEAGTVDISSNIKAQDENVI TLSEKYQNIGAYTKNGGTITVGGNATINGLAALADGVNAKVYLNGTDNIVNTGTGGGLFA TNGGIVEFNGGTIVNKDNSLARGLSQNDHDAVTPFHVENSGKIIFKNGATTNIEMYDGIL VSGEDSDYTIGTGGTNKYQGMSNVKVKLMKDGVNLGIFKNLDLTWAGNSGLTTFTNGLLA IPKFGALSTNGKSFKTTLVEGKLTVNSNVNLADNSDQFNGILMERELVTINSGKTITGNG KGLSMGSNSGAASNAESGYINKGTVNITGGTTSSGIAGINVSYGQILNDTTGIVEIDNGA GLYGTNGSKIVNKGTVTVTGSGTGIAGLGKGNTTPAITYGDGKIQIENHGTINISGANST GIYAENNKGAAQSDVIITNTKSLSLGDNSVGIALKSVSGVGGEINISGTGNSDIKVGTNG FGVYAEDSKLILDTNYGIETGDNGVGIYTKGSSTVGNTKTLNYKYFGSRTGSGIATLYSG SNATNNLNINLNNSTNTIAGMVGVFANGGGNFTNTGDITGKSNAVEFGIVADNNTNVINS GNITLGNASTLAKGNVGIYVKTANNITNTGSISVGDNSIALYGYGINHTNGNISVGNNGI GIFSQGGNVLLTAGTLTVSTNKAVGVFTSGANQTIASTNSMVIGDASYGFVIKGTGHNLT TNNGTVTLGNDSVFAYSDKTGTMTNRTQLLSTGSGNYGLYSAGNIKNLADINFASGVGNV GIYSTGGTAVNGDTGLGIRPRIIVNGTDSTNKLYGIGMAAGYYDEENKILKNTGNIVNYG TIDVLKSESIGMYAVGNGSTAKNYGTINLSGKNTVGMYLDQGAIGENYGTIKSVPNATND GIKGVVALNGSIFKNYGQVTIDSPNATGYYYVNTQNYENKGGTITVSGDNAKETDTASQN DTTKRAKGIEIEVKIDPSGGSSTATVIRNGTAVKPIAIDTNIASPSAKKLTVGDTTLDLS SRLSSIPNMSRGSEIGMYVDTSGINYTNPIQGLDKLTNLKAVNLIFGTEASEYTTEKDIE IGPNILNPYNDVIRDVSSAGGGKVEFLMNSSNLTWIATATQNVDLTIAKLYLSKRPYTTF AKEKDTYNFMDGLEQRYGVEKEGTRERELFKKINKLGLNEIEQKLFVQAVDEMKGHQYAN VQQRIQATGNILDKEFNYLRNEWSNPTKDSNKIKTFGVKGEYNTNTAGVIDYTNNAYGVA YVHEDETVRLGESVGWYAGIVHNTFKFKDFGNSKEEQLQAKVGLFKSVPFDENNSLNWRI SGDVFAGYNKMNRKFLVVDEVFGSKGRYHTYGLGLKNEISKEFRLSESFTFKPYAALGLE YGRVSKISEKSGEMKLEVKANDYFSIKPEIGTELAYKHYFGANTMKVGVSVAYENELGRV ANGKNKAKVAGTNADWYDLRGEKEDRTGNIKTDLNIDWDNQRVGVTASVGYDTKGHNVRA GVGLRVIF >gi|292606552|gb|ADGG01000058.1| GENE 3 7785 - 8531 803 248 aa, chain - ## HITS:1 COG:FN0805 KEGG:ns NR:ns ## COG: FN0805 COG4912 # Protein_GI_number: 19704140 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Fusobacterium nucleatum # 1 248 5 251 251 373 89.0 1e-103 MEIESLELKTEKEYKEFLDYLFSIRDLEYRDFNTKIVVPVDCEIIGIRTPILRDIAKKIA KTSSENFLNLFEKLFIKKKIKYYEEKVLYGFLIGYSKMEYQDRLKRIDFFINIIDNWAVC DIVDSSFKFINKNKKEDFYKYLNSKLSATNPWEQRFIFVMLLAYYVEDKYLKDIFKICEK IKSEEYYVNMAKAWLLSVCYVKYREETYKFLEKTKLDAWTVNKAIQKIRESLRVTKEEKE QVLILKRK >gi|292606552|gb|ADGG01000058.1| GENE 4 8713 - 10284 1924 523 aa, chain - ## HITS:1 COG:FN0806 KEGG:ns NR:ns ## COG: FN0806 COG2385 # Protein_GI_number: 19704141 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Fusobacterium nucleatum # 191 523 1 333 333 552 85.0 1e-157 MNKKISLIIVSAFLLLACSNNSGKKVKPVKPNGDYKVGTVVEGSSNNTNIERGNREKITL ENTVFKKLGLPLPYNTFGAAIPYLVPVNDNHKESFSVFGEYDENKALKYFKNLSSRGHGD NSPYWRWKTSIKKSDLYNKVESRIVSIYKTNPRNVLTLVNGEWQQAPIRSVGDVQDIIVA ARGESGIITHMLIITSNGKYLVAKEFNVRKLLATNNALYGSKGEEGSYASKPIMPSVSSL PSAYLALEEDGGYIHIYGGGYGHGVGMSQFAAGTLAKSGENYKSILKRYYTNVKLSSVES VLGNNKEIKVGITTNGSLEHGRLNIFSLENKVQIYNEDFDITVGANERVDVRNSSGAVTI TLENGKEYKTRNPLNFYAKGEYLTISPVRKAHTTSPKYRGILTIIPRSSSLRVINTIDIE KYLLQVVASEMPRSFGVEALKVQAVAARTYAVSDILKGKYAKDGFHIKDTVESQVYNNQV ENEDATRAIKETAGEIMTYDGMPIDAKYFSTSSGFTSHASNVW >gi|292606552|gb|ADGG01000058.1| GENE 5 10318 - 11055 1138 245 aa, chain - ## HITS:1 COG:FN0807 KEGG:ns NR:ns ## COG: FN0807 COG1212 # Protein_GI_number: 19704142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Fusobacterium nucleatum # 1 245 1 245 245 417 90.0 1e-116 MKFLGIIPARYSSTRLEGKPLKLIEGHTMIEWVYKRAKKSNLDSLIVATDDERIYNEVLN FGGQAIMTSTEHTNGTSRIAEVCEKIKDYDVIINIQGDEPLIEYEMINSLIETFKENKDL KMATLKHKLIEKEEIENPNNVKVICDKNDYAIYFSRSVIPYPRKADDISYFKHIGIYGYK RDFVIEYSKMPATALEIAESLEQLRVLENGYKIKVLETTHSLIGVDTQENLDQVINFVKK NNIRI >gi|292606552|gb|ADGG01000058.1| GENE 6 11151 - 11774 854 207 aa, chain + ## HITS:1 COG:FN0808 KEGG:ns NR:ns ## COG: FN0808 COG0406 # Protein_GI_number: 19704143 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Fusobacterium nucleatum # 1 205 1 205 206 336 86.0 2e-92 MEIYFVRHGQTIWNVEKRFQGLSDSPLTELGITQAKLLGKKLKDIKFDKFYSTSLKRAND TANYIKGDRDQEVEIFDDFIEISMGDMEGMGHEKFKELYPVQLKNFFFNQIEYDPREYNG ESFLEVRERVIKGLNKFVELNKNYERVLVVSHGATLKTLLHYISGKDISTLSDEAIPKNT SYTIVEYKDGKFEITDFSNTSHLEEIK >gi|292606552|gb|ADGG01000058.1| GENE 7 11792 - 12244 534 150 aa, chain + ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 1 150 1 150 150 304 97.0 3e-83 MNIVLYQPEIPYNTGNIGRSCVLTNSTLHLIKPLGFSLDEKQVKRAGMDYWHLVDLKIWE SFEEFLEANKGIRLFYATTKTKQKYSDVKYEENDFIMFGPESRGIPEEILNKNPERCITI PMIPMGRSLNLSNSAVIILYEAYRQLGFNF >gi|292606552|gb|ADGG01000058.1| GENE 8 12289 - 13155 492 288 aa, chain + ## HITS:1 COG:YPO1363 KEGG:ns NR:ns ## COG: YPO1363 COG2990 # Protein_GI_number: 16121643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 13 276 37 307 315 136 30.0 4e-32 MKNSTNKGEINTFKKKIKYIFRNLIFYKYSKKLANFILNDKFLKENIHKYPALCSKIHRP YLANSIKLEDKANIIISSYIFLNNYFKDSFLAELYEKGIYKICEIEGKNEEQLFFYLKVY TDFEKEGEFNLICTDKSENQLVKLTFAVDNNKIAIAGLQGMKKDENLEKIKYVTKNFYGI FPKKITLEVLYLLFSNFQKKAVSNNGHVYLSLRYKFKKYRKINVDYDEFWESLGAKKENE TFWLLPEKLTRKSIEDIPSKKRSQYTNRYKILDELKDKVDSFLLTYKK >gi|292606552|gb|ADGG01000058.1| GENE 9 13228 - 14259 1361 343 aa, chain + ## HITS:1 COG:FN0810 KEGG:ns NR:ns ## COG: FN0810 COG2008 # Protein_GI_number: 19704145 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Fusobacterium nucleatum # 1 340 1 340 340 617 90.0 1e-177 MISFKNDYSEGACPEVLEALVKTNYEQTIGYGEDEYCEEAKNLIKENINYPNADIYFLVG GTQANTTVISHALKPYEAVIASKTGHISIHETGAIEATGHKIIEVEPVDGKLTPELILNE LRKHEDHHMVKPKMVYISNTTEIGTVYTKDELEAISKVCKDNDLYLFLDGARLASALASE KCDINLEDYPKYCDAFYIGGTKCGLLFGEAVVIINEDIKKEFNFSIKQKGGLFAKGRLLG VQFATLFKNDLYYRIGVHSNKMALKIKNAFVEKGIKLATDSYTNQVFVDLSQKQIKELEK EVIFSVEFFGIGESQSSRFVTSWATKEEDVDKLVELIKNLNVD >gi|292606552|gb|ADGG01000058.1| GENE 10 14268 - 15134 249 288 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 74 277 82 278 285 100 34 3e-20 MKKYIVEHEFDGYEIGTYLKETKGYSSRGLRNLEIYLNGKRIKNNAKKIKKLNRIVIIEK EKSTGIKAMDIPIDIAYEDENLLIVNKEPYIIVHPTQKKVDKTLANAVVNYFEKTLGKTL VPRFYNRLDMNTSGLIIIAKNAYTQAFLQDKTEVKKTYKVIVSGIIEEDDFFIELPIGKV GDDLRRIELSEENGGKSAKTHIKVLERNREKNITFLEARLYTGRTHQIRAHLSLIGHPLV GDELYGGDMNLAKRQMLHAYKLEFQNPKTLENLKVEIEIPVDMKELLK >gi|292606552|gb|ADGG01000058.1| GENE 11 15315 - 16322 1623 335 aa, chain + ## HITS:1 COG:FN0652 KEGG:ns NR:ns ## COG: FN0652 COG0057 # Protein_GI_number: 19703987 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 335 1 335 335 608 96.0 1e-174 MAVKVAINGFGRIGRLALRVMSKNKDFDVVAINDLTDAKTLTHLFKYDSAQGRFDGTIEV TDDGFVVDGDSIKVFAKANPEELPWGELGIDVVLECTGFFTSKEKAEAHIKAGAKKVVIS APATGDLKTVVYNVNDNILDGSETVISGASCTTNCLAPMAKVLNDKFGIVEGLMTTIHAY TNDQNTLDAPHKKGDLRRARAAAENIVPNTTGAAKAIGLVIPELKGKLDGAAQRVPVITG SITELVTVLEKETSVEEINAAMKAASNESFGYTEEELVSSDIIGISFGSLFDATQTKVLS VGGKQLVKTVAWYDNEMSYTSQLIRTLKKFVEISK >gi|292606552|gb|ADGG01000058.1| GENE 12 16413 - 17609 1889 398 aa, chain + ## HITS:1 COG:FN0654 KEGG:ns NR:ns ## COG: FN0654 COG0126 # Protein_GI_number: 19703989 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Fusobacterium nucleatum # 1 398 1 398 398 686 94.0 0 MKKIITDLNLTDKKVLMRVDFNVPMKEGKITDENRIVQALPTIKYALEQNAKLILFSHLG KVKTEEDKASKSLKAVAEKLSELLGKNVTFIPETRGEKLETAINNLKSGEVLMFENTRFE DLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHRAHASNVGIAENIGAGNSAVGFLVEK ELKFIGEAVNNPKRPLIAILGGAKVSDKIGVIENLLTKADKILIGGAMMFTFLKAEGKNI GTSLVEDDKLDLAKDLLTKSNGKIVLPVDTVVVAEFNNDAEFSTVDVDNIPDNKMGLDIG EKTVKLFDSYIKTAKTVVWNGPMGVFEMSNFAKGTIGVCESIANLADAVTIIGGGDSAAA AISLGYADKFTHISTGGGASLEFLEGKVLPGVEAISNK >gi|292606552|gb|ADGG01000058.1| GENE 13 17723 - 18076 565 117 aa, chain + ## HITS:1 COG:no KEGG:FN0655 NR:ns ## KEGG: FN0655 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 6 117 1 112 112 155 80.0 5e-37 MKKSFLAICFAVLSLGSFAEDKIYEAKAEARGYNEDGVPIVLTVKATKKDGKVVIKDIVA QHKETDKIGGVAIEQLIKQVKDKQNYNKVDGISGATSTSAGFRRALRNAVKDIEKQN >gi|292606552|gb|ADGG01000058.1| GENE 14 18092 - 18472 700 126 aa, chain + ## HITS:1 COG:no KEGG:FN0656 NR:ns ## KEGG: FN0656 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 126 1 126 126 180 76.0 2e-44 MNFKDFGIREWLVIVFIVLGLAAFAFEDIFKPKIYEAEGTGIGYAGDITLKVKAYKKKDK SLRVTEIQVIHEDTDVIGGVCCTKLVNDVKARQRLDKIDMVAGATFTSEGFKEAFTEAIE NIKNQE >gi|292606552|gb|ADGG01000058.1| GENE 15 18500 - 19279 946 259 aa, chain - ## HITS:1 COG:FN0926 KEGG:ns NR:ns ## COG: FN0926 COG2357 # Protein_GI_number: 19704261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 259 1 259 259 450 93.0 1e-126 MDKLIKEEFFKEFSINEDYFLSTGLDWTELEKIYEDYVSLVPLLEKEAEYVVSKLIDVPS VHSVRRRVKKPSHLIEKIIRKGKKYQERNISVDNYKEIVTDLIGIRVLHLFKDDWQTIHH EILNLWDIKETPQVNIRRGDYNLSQFKETIKDINCDVIVREHGYRSVHYLVSIDITKVLN ISVEIQVRTVFEEAWSEIDHIMRYPYDVDNPIITEYLGIFNRIVGSADEMGTFLKKVKEN FGNAKNVDEVQRELDLKFK >gi|292606552|gb|ADGG01000058.1| GENE 16 19294 - 20148 849 284 aa, chain - ## HITS:1 COG:no KEGG:FN0925 NR:ns ## KEGG: FN0925 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 19 284 28 292 292 274 60.0 2e-72 MIEINKSANEVVETKIIENKEIELNIKPSDFLETSSEVKFTSMALHEFPIKYRNFSKELE PLKSNFLGITDVDFGFMKLEGVLVKVLDFLDFKLIEFRKKDFRIAIDEKDSLFEYEIYKD VKNKRLEEIFDFFAKFFKASTIKFKIANDKYEYYFHNNIEYYKFITLGQFLTQYTNLISE LKLYRYKNLSSAKNTFFELDLLDKSSSEEETNIWINAEIKSDIDVNTGDSLIIRRFHKIN FNDFPYDVEEIITLVHPLTEEEIKDNIIKLTRKSVKIKLRRVHK >gi|292606552|gb|ADGG01000058.1| GENE 17 20268 - 21071 745 267 aa, chain - ## HITS:1 COG:no KEGG:FN0924 NR:ns ## KEGG: FN0924 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 57 267 1 209 209 259 70.0 9e-68 MLSNNTKFNLLLGDNFNKLVSLPTKQVIIRSILSVIDRDFIVSSNNSSLAELVQKLLDKV LNEKQEIVEIISNVFSMENKYDLSFYKEIFEANIFSSIISTNYDYLLEENFLNSIKINTP FDISDDESGKIAFYKIYGDYKDNDINKFVLSSQDIKRIKILGFYAKFWEKLRVEFNKRAT IILGANLEDREFLDILDFILSKTDRLQTIYLYINDDIEKYMTDKNITNFINKYSIEIIKG EARDFIPNLKEKFFDEKKSGDALQNFA >gi|292606552|gb|ADGG01000058.1| GENE 18 21224 - 22663 1204 479 aa, chain + ## HITS:1 COG:FN0923 KEGG:ns NR:ns ## COG: FN0923 COG1502 # Protein_GI_number: 19704258 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Fusobacterium nucleatum # 1 479 1 479 479 758 81.0 0 MQDIQDLIITFVNLFLQYVWVANLFFIVVIITVEKKNPLYTILWIFILTLLPYVGFFIYL FFGLTFKKKRVANKIYKIKKLRSIKNVTNADRKELRRWKGLITYLEMSTDNHISANNNIE LYFTGQDFFSNLKKEIRNAREVINMEYFIFKFDNIGKEIADLLIEKAKEGLEVNLIIDGV NTSNFRLKRYFKNTGVRLHFFFKTYIPLFNIRLNYRDHRKLTIIDNKLAFIGGMNIGDEY LGKGKIGYWRDTSVKVFGDVVATFEKEFYFALSIVKDKFLKDERLAVEPTLKFEEEESVY MQLISSGPNYEFPVIRDNHIKLIQEAKKSVFIQTPYFVPDDLLLDTLKTAILSGIDVKIM IPNKADHLFIYWVNQYYIADLLRLGAHIYRYENGFIHSKTLLIDEEVISVGTCNLDYRSF YLNFEVNLNVYNKEVANAFKVQYYKDIAISKKLTFNDFAKRSIFTKIKESVFRLLSPIL >gi|292606552|gb|ADGG01000058.1| GENE 19 22676 - 23608 878 310 aa, chain + ## HITS:1 COG:FN0922 KEGG:ns NR:ns ## COG: FN0922 COG2334 # Protein_GI_number: 19704257 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Fusobacterium nucleatum # 1 307 1 307 312 368 71.0 1e-102 MGVFTKILDKEKEFIEEQYQIKILDIKNISNGILNSNFQIDCGDIKYILRIFEANRTLNE EEQELILLNKIASFIPVSEAIKNKDNKYISVFENKKFAIFNYVRGKVIEKIDTHIIREIA TYLGKFHAFTKDISPEKYNRKTRLDFNYFYDKICQSDIDFQDKEKLLNLASEIKDYDFSQ LECGIIHGDIFPDNVLFDENNNIKAILDFNESYYAPFIFDIAVVINFWIKINKYDFFTEN NFIRDFLNYYSKQRKITNQELKVLDLACKKVALTFIFLRLYREKIENSYQKAFSIEEKSY VSLLDLIKRR >gi|292606552|gb|ADGG01000058.1| GENE 20 23613 - 24527 1318 304 aa, chain + ## HITS:1 COG:FN0920 KEGG:ns NR:ns ## COG: FN0920 COG0501 # Protein_GI_number: 19704255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Fusobacterium nucleatum # 1 304 1 305 309 463 78.0 1e-130 MKGLAELKNKVVNAPHVNMFKVASWATMGVFATFLLIYIFAGDEMLRYYPYLIAFAFGAP LVSLMTSKASVKRAYNIRMIGNGGARSEKEQLVVDTVTLLSEKLNLQKLPEIGVYPSYDI NAFATGASKNSAMVAVSQGLLNNMNETEIIGVLAHEMSHVVNGDMLTSSILEGFCSAFGL IITYIILNNRRNNRSGGAAASMASFYMIKNSINFFGRIIASAYSRRREFGADRLAAQITD PSYMKSALLRLQEISEGRVNLQDGDREFAAFKITNNFSMGGFANLFSTHPSLEKRIAAIE RMEK >gi|292606552|gb|ADGG01000058.1| GENE 21 24599 - 27433 3514 944 aa, chain - ## HITS:1 COG:FN1103 KEGG:ns NR:ns ## COG: FN1103 COG0178 # Protein_GI_number: 19704438 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Fusobacterium nucleatum # 1 943 16 958 960 1773 95.0 0 MIDKITIKGARQHNLKNIDIELPKNEFIVITGVSGSGKSSLAFDTIYSEGQRRYVESLSA YARQFIGQMNKPEVDSIEGLSPAISIEQKTTNRNPRSTVGTITEVYDYLRLLFAHIGIAH CPICHTAVEKQSVDEIVESIMSKFDEGSKIILLSPVVKDKKGTHKNIFLNLFKKGFVRAR VNGEVLYLEDEIELDKNKKHNIEVVVDRLVLKKDDKDFESRLTQSIEAAIELSNGKLIVN DGKTDYLYSENYSCPNHEDVSIPELNPRLFSFNAPYGACPECKGLGKKLEVDENKLIENP DLSIEDGGMYIPGAMARKGYSWEIFRAMAKAAKIDLTKPVKDLTKKELDIIFYGYDEKFK FDYTGGEFDFHGYKEYEGAVKNLERRYYESFSESQKEEIENRYMVERICKVCKGKRLKDE VLAVTVNDKNIMEICDMSIKNSLDFFMNLSLTEKQEKIAKEILKEIRERLTFMTNVGLDY LTLSRETKTLSGGESQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLNRLKEL GNTLIVVEHDEDTMMQADKILDIGPGAGTFGGEIVAFGSPKEIMKNKNSVTGKFLSGKEE IEIPKKRRKWNKTLKLFGAKGNNLKNIDVEFPLGVMTVVTGVSGSGKSTLVNSTLYPILF NQLNKGKLYPLEYDKIEGLEELEKVINIDQTPIGRTPRSNPATYTKLFDDIRDIFAETQD AKLHGFKKGRFSFNVKGGRCEACQGAGILKIEMNFLPDVYVECEVCKGKRYNKETLDVYY KGKNIYDVLEMSVLEAYDFFKNIPTLERKLKVLIDVGLDYIKLGQPATTLSGGEAQRIKL ATELSKMSKGNTVYILDEPTTGLHFQDIKKLLEVLNRLLEKGNTVIIIEHNLDVIKTADH IIDIGVDGGENGGTVVATGTPEEIAKSKKSYTGKYIAKILKKKK >gi|292606552|gb|ADGG01000058.1| GENE 22 27513 - 28160 537 215 aa, chain - ## HITS:1 COG:FN1885 KEGG:ns NR:ns ## COG: FN1885 COG1272 # Protein_GI_number: 19705190 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Fusobacterium nucleatum # 1 215 1 215 215 322 91.0 4e-88 MKFNRRLTFSEELGNTITHGVMSAATLVLLPIGSLWGYFHGGYASAVGISIFIASLFLMF LSSTLYHSMYHNSKHKSIFRILDHIFIYVAIAGSYTPVALVIIGGWKGILIVVIQWTIVL VGILYKSLATRAMPKLSLTLYLVMGWIAIFFFPTLLRKANTVFLVLVVLGGVMYSIGAYF FAHDYKKYYHMIWHIFINIAAILHIIGIGFFLYRK >gi|292606552|gb|ADGG01000058.1| GENE 23 28285 - 29049 893 254 aa, chain + ## HITS:1 COG:FN0875 KEGG:ns NR:ns ## COG: FN0875 COG0566 # Protein_GI_number: 19704210 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Fusobacterium nucleatum # 1 252 6 259 261 338 81.0 7e-93 MEIIESKENKLIKFLKKLKQKKYRDVEGQFLAEGHKFLDYNTKPEIIIVREDVKDLYMEK LNRFECKKILVNEKIFQELSSQENSQGIIIVYSKKNNDLNCLSNNLVILDDVADPGNLGT IIRLCDATNFKDIILTKGTVDAYNEKVIRATMGSILNVNLFYLEKQEIIKLLKENNYSII ATYLDKEALPYNKIKLKEKNAVIFGNEGRGISDEFVSISDCKTVIPILSNTESLNVAVAS AIILYKFREIEGLI >gi|292606552|gb|ADGG01000058.1| GENE 24 29198 - 30097 1088 299 aa, chain - ## HITS:1 COG:FN0164 KEGG:ns NR:ns ## COG: FN0164 COG3023 # Protein_GI_number: 19703509 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Fusobacterium nucleatum # 14 298 1 287 288 414 72.0 1e-115 MKKILALLSLLIFMVACSSSDTPVKETKGISTPRRTSSSSLIGSMGKFKVDSDTYVSLGR NERIQFVVVHYTATNNEYSIKELISNRVSAHFLVLDEDDNIIYNLVPLDQRAWHAGASSF RGRTNLNDTSIGIEIVSDGIARDRRNDPNRYPPYDAYLEYKPIQIEKVAQIIKYVAARYN IPAKNIVAHSDIAPSRKKDPGAKFPWKELYEKYDIGAWYNESDKQAFMNEEKFNATSISD IKEELRKYGYEVNRTNEWDRDSRDVVYAFQLHFNQKNATGNMDLETYAILKALNKKYPN >gi|292606552|gb|ADGG01000058.1| GENE 25 30223 - 32148 2291 641 aa, chain + ## HITS:1 COG:FN0462 KEGG:ns NR:ns ## COG: FN0462 COG0323 # Protein_GI_number: 19703797 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Fusobacterium nucleatum # 1 641 7 643 643 945 82.0 0 MNRIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLDISISDSG CGMSKEDLLLSIERHATSKITTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDSPNG TQMNVLGGKVTNLKDIQKNVGTQIEIKDLFYNTPARKKFLRKDTTEYLNIKDIFLREALA NPNVKFILNIEGKESIRTSGNGIENAILEIFGKNYLKNFSKFSLGYLGNANLFKANKDSI FVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPSALIFLDIDPAEIDVNVHPSKKIVKFAN QSKIYDLVKGEIEKFFSDDENFISPHIEVEDEEVETFEEKEEKLEYSNNNFLDINDFKDE KESLSQLSVVQKEDYLKKDYSEIKVEKPNISHIENTVKTSSNEIKENIETFKKVDNDFDL IEKEVGTEKTKDKYIFDTKDTSRGKIFDDFSSLKNIDFRVIGQVFDSFILVERNNLLEIY DQHIIHERILYEKLKQEYYSHSMTKQNLLVPIRFELDPREKQLALENTEIFSSFGFDIDD FEKNEILLRTTPTMDLRDSYENIIKEILDNISKNKDKDIRENIIVSMSCKGAIKANHKLT IEEMYSMVAKLHEVGEYTCPHGRPIIVKMSLLDLEKLFKRK >gi|292606552|gb|ADGG01000058.1| GENE 26 32158 - 32625 326 155 aa, chain + ## HITS:1 COG:FN0463 KEGG:ns NR:ns ## COG: FN0463 COG1576 # Protein_GI_number: 19703798 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 155 1 155 155 223 86.0 1e-58 MNINIICIGKIKDKYINEGIAEFSKRMTSFANLNIIELKEYNKEDNMNISIDKESQDILK QLSKTNSHNILLDLNGKELSSEDMSEYIEDLKNKGTSSINFIIGGSNGVNKELKNSVDMK LKFSHFTFPHQLMRLILLEQVYRWFAISNNIKYHK >gi|292606552|gb|ADGG01000058.1| GENE 27 33046 - 34371 1512 441 aa, chain + ## HITS:1 COG:no KEGG:FN0465 NR:ns ## KEGG: FN0465 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 441 2 410 410 439 61.0 1e-122 MLKKLAITLVAVVFVGCYNLDNIGGKSSGGSIREIEIAGSQQTGGTTASSPNTTNVGTVE TKPQQEEKIISVDVNDENVNDYLTIIKANLRTSAKKVDDNIKNQYTVPIGETLVFPVDNE KAIKLSTSPKNANPKISLTNGKVTFRTVYQGQYVLSTYVNGSVNRKITVSALSKYNFDEK DLYKLILQDSEKRDKDVENAVTLYKMLYPAGKYSKEVNYLFLKYAYEIKNNSLINEALAG VKNDFSSYSDSEKATILRAAKLANKSIFIPSEVYNTNNSELKNALDEYNNSNSSRTIDKT VSTPVDNRTVEKNKNKEEETSVVDYAKEKVRSVIGGISGTTSTASTVGSAKSKATNSTES YYDKGMKNLNSNPKVAIDNFKKSLSSEKIQDKKPEIYYNIASSYAKLGNRVEVTKYIRLL KQEFPSSSWAKKSEALSNLIK >gi|292606552|gb|ADGG01000058.1| GENE 28 34393 - 35874 1881 493 aa, chain + ## HITS:1 COG:FN0466 KEGG:ns NR:ns ## COG: FN0466 COG1190 # Protein_GI_number: 19703801 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Fusobacterium nucleatum # 1 493 1 493 493 939 94.0 0 MEKYFDRLEKEPLIAERWKKIEELESYGIKAFGSKYDKQIMIGDILKHNPEENLKFKTAG RIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEEFDHIVKMLNVGDIIGVEGELFITH TEELTLRVKSISLLTKNVRSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRSTFIKRTQIIK AVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPELYLKKLIVGGF ERVYELGRNFRNEGISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDIE YDGVQLSLKNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVEVADHMDSVGHVIN EFFEQKCEERVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDP ADQRGRFEAQVEEALRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI RDVILFPQMKPRD >gi|292606552|gb|ADGG01000058.1| GENE 29 35953 - 36309 274 118 aa, chain + ## HITS:1 COG:FN0467 KEGG:ns NR:ns ## COG: FN0467 COG1380 # Protein_GI_number: 19703802 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Fusobacterium nucleatum # 1 115 1 115 118 121 81.0 3e-28 MLREFMLIFTINYVGMLLSKILHLPLPGTIVSLLLLFFMLQFKVLKLEKIENAGNFLLLN MTIFFMPPTVKIIDSYELLEKDLFKIIVIIIVSTFLTMGITGKVVQLMIDFKERKEKK >gi|292606552|gb|ADGG01000058.1| GENE 30 36309 - 37001 857 230 aa, chain + ## HITS:1 COG:FN0468 KEGG:ns NR:ns ## COG: FN0468 COG1346 # Protein_GI_number: 19703803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Fusobacterium nucleatum # 1 230 1 230 230 337 87.0 9e-93 MKEIIVSNLFFGLILSYFALEIGKWVFKKTQTPLCNPFLIGTIIVIVILKIFNISTDDYY KGAGMILFLLGPATVALAIPLYKKWNLFKKFFVPVMTGAIVGSFVGIVSVIVLGKLFGMD DKLIFSLMPKSITTPFGIEVSSMLGGIPAITVVSIMLTGIAGNVTAPLISKIFRVKHSVA VGIGIGVSSHAVGTSKAMEIGEVEGSMSALSIVFAGILTLVWAPLLKLLV >gi|292606552|gb|ADGG01000058.1| GENE 31 37011 - 37619 849 202 aa, chain + ## HITS:1 COG:FN0469 KEGG:ns NR:ns ## COG: FN0469 COG3142 # Protein_GI_number: 19703804 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Fusobacterium nucleatum # 1 202 1 202 202 335 87.0 3e-92 MIKEACVESFEKSLEAQNNGANRIELCENLAVGGTTPSYGTVKICLEKLNIPIFPMIRAR GGNFVYSKDEIEIMKEDIRIFKELGVRGVVFGFLTSDNKIDLELTKELVELASPMEVTFH KAIDEISNPLDYIEDLINIGVKRILTSGGKATASEGSDLINQMIEKANSRLKIVVAGKVT KENLNELQNLIPADEFHGKLIV >gi|292606552|gb|ADGG01000058.1| GENE 32 37870 - 39408 2017 512 aa, chain + ## HITS:1 COG:FN0470 KEGG:ns NR:ns ## COG: FN0470 COG2978 # Protein_GI_number: 19703805 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Fusobacterium nucleatum # 1 512 1 512 512 845 90.0 0 MEKEKKKGIQRFLDFVERGGNKLPHPLTLFWIFCVIIAIISAIAASSGASVTYEAFDRKE NVIKETTLTIKSLLNAEGIRYIFSSMVKNFTGFAPLGTVLVALIGIGVAEGSGLMSATMK KVVTATPKRFLTAMVVLAGVMSNIASDAGYVVLIPLGAVIFLSFGRHPIAGLAAAFAGVS GGFSANLLLSTTDPLLSGITTEAAKLLNPSYFVNPASNYYFMAASTFLITIMGTFITEKI IEPRLGEYKGEVIVDHNELTDKERKALRWAGVSVLVFCAVIGFLILPENAILKVDGNLKQ WTHDGLVPTLMMFFLVPGIVYGKVAGTIKNDKDVAKMMGSSLATMGGYLALSFAAAQFVA YFSYTNLGTFVAVKGADFLQSIGLTGLPLIVLFVLVAAFINLFMGSASAKWAIMAPIFVP MLMRLGYTPEFTQLAYRIGDSSTNIITPLMTYFAMIVAFMQKYDKESGMGTLISVMLPYS MCFLVGWTIFLVIWFMTGLPIGIEGAIHLTGM >gi|292606552|gb|ADGG01000058.1| GENE 33 39535 - 40524 1434 329 aa, chain + ## HITS:1 COG:FN1279 KEGG:ns NR:ns ## COG: FN1279 COG0491 # Protein_GI_number: 19704614 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Fusobacterium nucleatum # 1 324 1 324 326 595 90.0 1e-170 MLNEIAKNIYLIEVPLPKNPLKALNCYFIKNGENILVVDSGFDHEESEKVFFGALEELGA QVGKTDMFLTHLHADHSGLALKFKNKYQGKVYCSQIDTDYINKMKHELYADRFVPTLKVM GIEPDFKFFETHPGLVYCIKGKLDTTIVKDGDKIDFGYYNFEVIDLSGHTPGQVGIYDKN HKILFSGDHILNKITPNISFWDFKYEDILGTYLKNLDKVYNMEVDTIYSAHRGIIDNPKL RIDELKKHYADRNAEVYNLLKEVEENSAAQMAAKMHWDYRAKNFEEFPNNQKWFATGEAL ANLEHLRAIGKADYEFKGGVAYYRIKERT >gi|292606552|gb|ADGG01000058.1| GENE 34 40724 - 41269 434 181 aa, chain + ## HITS:1 COG:no KEGG:FN0184 NR:ns ## KEGG: FN0184 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 54 163 19 126 143 68 42.0 9e-11 MAIKVKLEKDGFIKDGFVGYSYTSAIFDFWVPAFRLDFNAFVFFFGLYMLEKFLSEFFTI YSILNHYSIENKWFFYILNASVPIFTLLIAFIIAFFYNKHYTKKMLKEGWSPLENDEYSN AILKGYRYLDYTDAEIKDEDKMQRYQNYIDKAKSNEVKKCLCFIIFWIIIFVSFYFYYFR A >gi|292606552|gb|ADGG01000058.1| GENE 35 41294 - 41851 480 185 aa, chain + ## HITS:1 COG:no KEGG:FN0184 NR:ns ## KEGG: FN0184 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 94 168 52 126 143 62 46.0 6e-09 MSVKIQLEKNGEVTDAFTGFSWTTFIFGFWVPAFRKKSKGFGLFFLFFIIKIIILYTLSK QNNEIELNLLIHGTFKPSYGMITPVVLAAAIYPLETWIAYFYNNYYTNNLLAEGYRPIEN DDYSVAILKDYSYLPYSKEELDDNVKMKRYREISTLARKEERKKIYIFVGIWAIFIIIFW FSNLF >gi|292606552|gb|ADGG01000058.1| GENE 36 41881 - 42399 406 172 aa, chain + ## HITS:1 COG:no KEGG:FN0184 NR:ns ## KEGG: FN0184 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 45 151 21 126 143 102 56.0 8e-21 MAIEVNLEKYGHRKKGFLGFSWTAFFFNFLVPIFRADFKWFLIFIFPFIFVSLGTSFDLD FDNNFIAFIFIFPVFVSKFVFPFIYNKFYTKGLIKEGYLPPKDDDYSNAILKGTGYLEYT NEDLLDEEKMERYRLIIEQYEKERKNNNITLIIFFGSLIFIIAFFYFMASYS >gi|292606552|gb|ADGG01000058.1| GENE 37 42549 - 43979 2050 476 aa, chain + ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 1 476 23 498 498 873 90.0 0 MFDVVVIGAGIMGAAVSRELSRYELKTLLLDKENDVSCGTTKANSAIVHAGYDAKEGSLM AKYNVLGNAMYRKLCEEVDAPFRKVGSYVLAFSEKEKEHLEMLYQRGLNNGVPEMEIIDA AEIQRREPHVSKEAVAALYAGTAGITGPWELTIKLVENAMENGVELKLNAEVANIKKEND VFKIELKNGEIIEAKAIVNAAGVYADFINNMLSNKKFNITPRIGEYYLLDKVQGYLTDSV IFQCPTEMGKGILVSKTAHGNIIVGPTASDVDNKDDVGNTQAGLDTVRQFATKSIKDVNF RDNIRNFAGLRAEADTGDFILGEAEDVKGLFNIAGTKSPGLTSAPAMAIDLAKMIVESFG GVKEKANFIQNKRMIHFITLSPEEKAEVIKKDPRYGRIICRCENITEGEIVDAIHRKCGG TTLNGIKRRVRPGAGRCQGGFCGPRVQEILARELGEDLEEIVMEQKNSYILTGKTK >gi|292606552|gb|ADGG01000058.1| GENE 38 43991 - 45256 2048 421 aa, chain + ## HITS:1 COG:FN0182 KEGG:ns NR:ns ## COG: FN0182 COG0446 # Protein_GI_number: 19703527 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 421 1 421 421 735 94.0 0 MNMKYDLVVVGGGPAGLAAAVEAKKNGIDSILVIERAKELGGILQQCIHNGFGLHEFKEE LTGPEYAQRFMDQLFELNIEYKLDTMVLEVSENKIVQAINSVDGYMIIEAKSIVLTMGCR ERTRGAIAIPGDRPAGVFTAGAAQRYINMEGYMVGKRVVILGSGDIGLIMARRLTLEGAK VLAVAELMPFSGGLMRNIVQCLEDYDIPLYLSHTVVDIIGKDRVEKVIIAKVDENKKAIP GTEIEYECDTLLLSVGLIPENDISRATGIKIDPRTSGPVVNELMETSIEGIFASGNVVHV HDLVDFVSIESRKAGKSAAKYIKGEVANGEYIEVETGNGIGYTVPQKFRIENIEKNLELS MRVRQIYKNVKIVVKSNDFVIHSVKKTHMAPGEMEKITLSKTVLGKIDAKKIVVEVVEED K >gi|292606552|gb|ADGG01000058.1| GENE 39 45256 - 45600 442 114 aa, chain + ## HITS:1 COG:FN0181 KEGG:ns NR:ns ## COG: FN0181 COG3862 # Protein_GI_number: 19703526 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Fusobacterium nucleatum # 1 114 1 114 114 183 87.0 8e-47 MEKEMICIVCPVGCHISVNTENYEVKGNACPRGAVYGKEELTAPKRVVTSTVKIKNALDH RCPVKTETAIPKELNFKLMEELKKVELTAPVKRGDIVLENIFNTGVNVVVTKDM >gi|292606552|gb|ADGG01000058.1| GENE 40 45712 - 46443 1187 243 aa, chain + ## HITS:1 COG:FN1838 KEGG:ns NR:ns ## COG: FN1838 COG0580 # Protein_GI_number: 19705143 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Fusobacterium nucleatum # 1 243 12 254 254 356 89.0 2e-98 MSNMSMYIGEFVGTTLLLLLGNGVNMTCSLKHSYGKGAGWIVTTFGWGFAVMIPAYITGW VSGAHMNPALTIALAVTGKFPGNLVLGYIVAQMLGGIFGATLAYLVYKVQMDEEPEAGVK LGVFSTGPSIDAPIWNIITEVIATALLLIGVLAIGYGEVGIQPGNGALFVGLLIVVLGMA TGGATGYALNPARDLGPRIAHAILPIKGKGGSNWKYSWIPVVGPTIGAILGAVVFDAFLA AVL >gi|292606552|gb|ADGG01000058.1| GENE 41 46510 - 48003 2300 497 aa, chain + ## HITS:1 COG:FN1839 KEGG:ns NR:ns ## COG: FN1839 COG0554 # Protein_GI_number: 19705144 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Fusobacterium nucleatum # 1 497 1 497 497 954 95.0 0 MKYIVALDQGTTSSRAILFDESQNIVGVAQKEFTQIYPNEGWVEHDPMEIWASQSGVLSE VIARAGISQHDIIALGITNQRETTIVWDKNTGKPVYNAIVWQCRRTAKICDELKKIEGFS DYIKDNTGLLVDAYFSGTKIKWILDNVEGAREKAEKGELLFGTVDTWLIWKLTNGKVHAT DYTNASRTMLYNIKELKWDEKILETLNIPKSMLPEVKDSSGTFGYANLGGKGGHRVPIAG VAGDQQSALFGQACFEEGESKNTYGTGCFLLMNTGEKFVKSNNGLITTIAIGLNGKVQYA LEGSVFVGGASVQWLRDELKLISESRDTEYFARKVKDNGGVYVVPAFVGLGAPYWDMYAR GAILGLTRGANKNHIIRATLESIAYQTKDVLKAMEEDSGIKLNGLKVDGGAAANNFLMEF QADILGEVVKRPTVLETTALGAAYLAGLAVGFWESKEEIRQKWVLDKEFTPNMSEEERSK KYTGWLKAVERSKNWEE >gi|292606552|gb|ADGG01000058.1| GENE 42 48089 - 49075 1512 328 aa, chain + ## HITS:1 COG:FN1840 KEGG:ns NR:ns ## COG: FN1840 COG2376 # Protein_GI_number: 19705145 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 328 5 332 332 567 93.0 1e-161 MKKLINDKNNIVEEVVEGMIKAFPDKLSRVENEPIIIRKNKKVDKVALISGGGSGHEPAH AGFVGHGMLDAAVCGEIFTSPGADKVYNAIKSVDGGKGVLLIIKNYSGDIMNFEMAGEMA QAEGINVKQVVVDDDIAVENSTCTVGRRGIAGTIFVHKILGAAAEKGYDLDKLVELGNKV VKNLKTMGMSLKACTVFTTGKESFEIADDEVEIGLGIHGEPGTHREKMATANEFTEKLFE KIYAESNPQKGDRFAVLVNGLGETTLIELFIINNHLQDLLKAKGIEVAKTLVGNYMTSLD MGGFSITLLKLDNEMEELLKAEEDTIAF >gi|292606552|gb|ADGG01000058.1| GENE 43 49177 - 49833 989 218 aa, chain + ## HITS:1 COG:FN1841 KEGG:ns NR:ns ## COG: FN1841 COG2376 # Protein_GI_number: 19705146 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 17 218 1 202 202 333 88.0 2e-91 MYLTKKEKERGKGRDKMFLEIIEKISDEIIKNEDYLTELDREIGDGDHGVNLARGFTEIK NQLANFKTLAVSDVFTKMGMILLTKVGGASGAIYGTAFMSSGTFLKGKTDFDNQAFLGTL NAMIEGIQKRGKAVLGEKTMLDTIIPTYNFLEKSFNDGKSLKDIKSEVIEVAKNSMEVTK DIVATKGRASYLGERSVGHIDPGAMSSYLMIKVVCENL >gi|292606552|gb|ADGG01000058.1| GENE 44 49842 - 50246 607 134 aa, chain + ## HITS:1 COG:FN1842 KEGG:ns NR:ns ## COG: FN1842 COG3412 # Protein_GI_number: 19705147 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 134 3 136 136 212 87.0 1e-55 MLGFVVVSHSKDLAEAVIHLANEMKRYDFPLINGSGTEGDFLGSNPLTIKEAIMNAKTDK GTLVFVDIGSSVLNTQVAIDFLADEGVDVENIKIADAPLVEGLIAGVAINDEKADIESIL NELKELKTFSKLTY >gi|292606552|gb|ADGG01000058.1| GENE 45 50295 - 51578 1839 427 aa, chain - ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 17 427 1 411 411 720 92.0 0 METKIEKVLKILEEEIVAAEGCTEPIALSYAAAKARRILGTVPNKVDVFLSGNIIKNVKS VTIPNSEGMVGIEAAIAMGLIAGDDKKELMVISDVTSEQVKEVKEFLDKGIIKTHVHPGD IKLYIRLEISNDEDNVVLEIKHTHTNVTQILKNGKVLLSQVCNDGDFNSSLTDRKVLSVK FIYDLAKTIDIDLIRPIFQKVVNYNSAIAEEGLKGKYGVNIGKMILDNIEKGIYGNDVRN KAASYASAGSDARMSGCALPVMTTSGSGNQGMTASLPIIKFAAEKNLSEEELIRGLFVSH LITIHVKTNVGRLSAYCGAICAAAGVAASLTYLHGGSYEMVCAAITNILGNLSGVICDGA KASCAMKISSGVYSAFDATMLALNKDVLKSGDGIVGVDIEETIRNVGELAQSGMKGTDET ILDIMTK >gi|292606552|gb|ADGG01000058.1| GENE 46 51757 - 52926 1646 389 aa, chain + ## HITS:1 COG:FN1148 KEGG:ns NR:ns ## COG: FN1148 COG1301 # Protein_GI_number: 19704483 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 1 388 1 388 390 579 93.0 1e-165 MEKEKKGDTLIIKLILGVIAGIIIGLVATEKVISIILPIKFFLGELIFFVVPFIIIGFIA PAITQLKSNASKMLLTMLGLSYLSSIGAAFFSATAGYALIPKLNIVSSVEGLKELPPILF KVQIPPAISVMGALVLALLMGLAVVWTNSKRTEELLNEFNNIMLMIVNKIIIPVLPIFIA TTFATLAYEGSITKQLPVFLKVILIVLVGHYIWITVLYIIGGIVSGKNPWSLLKHYGEAY MTAVGTMSSAATLPVSLKCVRKSGVLDEEITNFAIPLGATTHLCGSVLTETFFVMVVSKI LYGSLPPVGTMILFIVLLGVFAVGAPGVPGGTVLASLGLIISVLGFDETGTALMITIFAL QDSFGTACNITGDGALALILNGIFKKKEA >gi|292606552|gb|ADGG01000058.1| GENE 47 53101 - 60747 10878 2548 aa, chain - ## HITS:1 COG:no KEGG:FN2047 NR:ns ## KEGG: FN2047 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 897 2548 1 1630 1630 1924 69.0 0 MNNSLNNGERNLRSIAKRYENVKYSVGLAVLFLMKGTSAFSDNNIIQEAEKQKDVLTDVK KEKAEIKETKKSTQVTQRPKASWVNMQFGASDMYSNFFATPKTKVEKSSIVKSEKTILVA SADNSTSLPMFSKLLTDIEETTENRTEVLATIANKENAPVETAVPTMEEIKTGKENLRSS VDNLQNKIDIARRENQKEIDGLRLELIQLMEQGNQVVKSPWSSWQFGANYMYDNWNGAYK GRGDKTEKYPFEGIYTRSSDLFLRNISPLDDVDRDIYEKYTKSVKDNAINSALTSTLVQR GKSVSYGLASNSEAQEPIAKIELGASVKPKNISEPQIKVELPKIEPKVIKELKTPQPLGA PTPPTINIPKFNPVAPKVDPVSLPTPPTFNIKLGSYCNGMETNCTVALHGGAYNTYYQGF AKTYSTSGVINNLTDGSPSLRHSWNSTGNILLKSYFDFVSGGTATLEQNLTIDSINPLNA TERAAETAANRPYNNGNFLLGGSRIATMDNAIDGYLENRATINLAGPLVVGFEVQTDTFH KAVSQKAREVKNVGIITDEIEEGYRGADGLGGLHVGKTGGQTVASNSATLPLSSLPIRLK NDDITISRTPDVVDKNGVVKTRGGYVGYKVGMILTAENNDTRADSDYRLINGTGGTIAFN GKSSIGIQIYAPGSNSTHITVKNDGIIKMGGVESYGLKLSSRVSDENMTFENNNTINISG AGGNSLSSGMAILEDTNLKNTSSIRTYTGKVLNNGTISVSGGQGNTGMVLKLRDSDDITN AINGKINVSGSKNIGMRVDLGEVITDNADGGSPKAINNGKITVGDGEQNIGMVANSSETT ANGLEKAIATNNKNIEFVGKATKAIGMFSQDGAEIVNAATGKIQGPTAGGLVGTLGMVIQ GKIPTSKNIDSSGVNNGEIDLAGTKVTGVYNQGKFTMENGATGTAKLTTSGDGAISLYAK GNSTITNINSGKIIGKDGAITLFADNKATVNLGNSTAAPELESHGAGSLLFYNYTASTTG GVTKYDPDGIFKLNNANIKAKLDSGATAFYFKDTTPAAAGVSGSTADKLNAMFAGSGTNK LKLKLSDKDSTLFVLDNASPNINPIKISEVGANAATVLGNFVTIDPTSSQNYKAYKATKA TLSIDENVDLDNHSGSAISKYYRVDFLNSAVTVEAGKKMSGTDATQVKQVIAQANYVDAK DYNHVKVTNNGTIDFSKRNGTAIVVDYGQAINNSLIKMDAKNTTGENSIGLFGASGSKLT NSSTGKIQLGTNGVGIWGVNKITTSVSTWGKNIDITNAGEITGLANKNSVFGIYADNNIT AYPSATSTIVHSGKIDLSQNKESVAIYMKNGDLTSTGKISVNEGSVGVDATNSNVTINGG TYAIGKESIGFKLTNVPATKKFLGNSGNIAITGEGSVAYLLNNAILTSGTNFKDNLTLSS TKAYTYINATNGTTLNYLNTKNIANDDSIFINTKNSTINLLAGTDISSTNKKVTGVYSTR STVKNEGTIRLMGDKSSALYTEGSTVSNESTGKITVGKDGSGIYVKSLTAPVAIGSGINY GEINIGEASVGMRAENATIVNETTGKILSTAKSAVGMSQSGGTQNIVNKGTITLTGDKST GLHSEKITATNHKVINTGVITVGNSSSVGIYSANGLNSTVESSGKVVAGNKSTAIYAGNV NLNGNSETTAGNGGIGVYSNKGTVNISVNSKISVGNTLGTGKEAVGVYLAGNNQTLNSNT DNLTIGHGSFGYVMTGQGNTVRTGMPGTAGQVMLSKDSVFIYSADKTGSIRNYTNVKSTG DENYGIYALGAVENRGNIDFSQGVGNVGAYSYVKGATTRPNAIKNYGTIKVSKTDITDPD NRKYGIGMAAGFTEEVPAGSGNYVVRGLGNVENFGTIQVTTPDSIGMYATGKGSRIYNNG RIELSGTKRNIGMFAEHGAEVINDTNGVITTVGTGNVGQIGIAVTKGGVLTNKGRIHIDA SKGYGLFLAGAIVKNYGEARITVANGAEKIKKVKAANTSKEMQDILGNKNKIIISSPANA AEAKIIANGVVQTPTVVHVQAIPNRKPNDIPTSSVGMYVDTSGINYTRPITNIGALRNLT QSDLIIGTEATKYTTSKYIQLGQDIIEPFNDMIRTSGIEKWNIYSGSLTWMASITQLPDF TIRNAYLAKVPYTVFAGRVATPVEKKDTYNFLDGLEQRYGVEKIGTRENKVFQKLNSIGN NEEILFHQATDEMMGHQYANIQQRIQATGNILDKEFKYLRSSWSNPSKDSNKIKTFGTRG EYKTNTAGVIDYKNNAYGVAYVHEDETVRLGESTGWYTGIVHNTFRFKDIGNSKEEQLQA KLGLFKSIPFDHNNGLNWTISGDIFAGYNKMNRKFLVVDEVFNAKGKYHTYGLGLKNELS SEFRLSEGFSIKPYVAIGLEYGRVSKVREKSGEMKLEVKSNDYFSIRPEIGAELGFKHHF DRKTVRVGVSVAYENELGKVANGKNKARVAGTDADWFNIRGEKEDRRGNIKSDLNIGVDN QRVGVTANIGYDTKGHNVRGGVGLRVIF >gi|292606552|gb|ADGG01000058.1| GENE 48 60849 - 62258 1270 469 aa, chain - ## HITS:1 COG:FN1462 KEGG:ns NR:ns ## COG: FN1462 COG1167 # Protein_GI_number: 19704794 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 1 456 1 456 469 751 89.0 0 MIILNLDNKSKIPLYIQIYTEIKKLIQTKILKANEKLPSKKDFIDYYNISQNTIQNALYL LLEEGYIFSIERKGYFVSDIENLIIQNVKVENKAKFKEKEKIHYDFSYSGVDKKSLARTI FKRITKDVYDEENEDLLFQGHIQGDLLLRKSICEYLSQSRGFKVDAEQVVISSGTEYLFY IIFKLFNNKIYGLENPCHKMFKELFLTNNISFKAISLDENGIVIDDLKKNNVNIAYVTPS HQFPTGAIMSISRRTELLNWANENPDCYIVEDDYDSEFKYTGRPIPALKANDINDKVIYL GSFSKSISPAIRVSYLVLPKALLNIYQRELPYFICPVPTLNQKILYRFIKDGYFVKHINK MRTLYKKKREFLVNTIKTYSSKILNKEIQIQGADAGLHMVIKLNQKINEKLFLNECLENS LKLYSLEEYNIEEIHRENSYFLLGYANLTNKEIEEGILLLLKILKKYCI >gi|292606552|gb|ADGG01000058.1| GENE 49 62365 - 63207 1468 280 aa, chain + ## HITS:1 COG:FN1463 KEGG:ns NR:ns ## COG: FN1463 COG0214 # Protein_GI_number: 19704795 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Fusobacterium nucleatum # 1 280 1 280 280 502 97.0 1e-142 MDTRFNGGVIMDVTSKEQAIIAEEAGAVAVMALERIPADIRAAGGVSRMSDPKLIKEIMS AVKIPVMAKVRIGHFVEAEILQAIGIDFIDESEVLSPADSVHHVNKRDFTTPFVCGARNL GEALRRICEGAKMIRTKGEAGTGDVVQAVSHMRQIMKEINLVKALRDDELYVMAKDLQVP YDLVKYVHDNGRLPVPNFSAGGVATPADAALMRRLGADGVFVGSGIFKSGDPRKRAKAIV EAVKNYDNPEIIARVSEDLGEAMVGINENEIKIIMAERGV >gi|292606552|gb|ADGG01000058.1| GENE 50 63322 - 63606 468 94 aa, chain - ## HITS:1 COG:no KEGG:FN1972 NR:ns ## KEGG: FN1972 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 91 28 117 122 93 52.0 3e-18 MLGKVITEHGQVVNNQDIMVVHLHLKEGETIPAHNHPGRQIFFTVVEGEVEVYLDEKETY PLVPKKVLEFDGEARISVKALKESDIFVYLVVKR >gi|292606552|gb|ADGG01000058.1| GENE 51 63717 - 64421 531 234 aa, chain - ## HITS:1 COG:SPy0421 KEGG:ns NR:ns ## COG: SPy0421 COG3619 # Protein_GI_number: 15674550 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 7 234 10 233 235 167 42.0 2e-41 MEKIKEEVPEKLRIAVLLSFISGYINAFTYNNAGELFAGAQTGNVIFMALHFAKGNLEKA VEFLIPIISFMIGQIFIYCFRNFFQRRGHKGYIPSSLLMLFIMIMLIVLLPFFDYHFIVV TLAFFAAIQSDTFQRLRGFSYATIMMTGNVKNAPRLLIEGLVQRDRELLVRGFLLFLIIF SFMLGVGISTYFTQFVKKSALVPLILPLSYINYVLFKEEHSVIDVVKSKIRKIK >gi|292606552|gb|ADGG01000058.1| GENE 52 64577 - 64705 63 42 aa, chain - ## HITS:1 COG:YPO2003 KEGG:ns NR:ns ## COG: YPO2003 COG0716 # Protein_GI_number: 16122245 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 1 41 134 174 235 60 51.0 1e-09 MKNKVKNLKDYDVVFVGYPIWHGDLPMAVYTFFDENNLSGKR >gi|292606552|gb|ADGG01000058.1| GENE 53 64765 - 65331 626 188 aa, chain - ## HITS:1 COG:L85237 KEGG:ns NR:ns ## COG: L85237 COG3548 # Protein_GI_number: 15672844 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Lactococcus lactis # 1 187 1 181 188 82 36.0 3e-16 MTKERLVAFFDAVLAIIMTILVLELEKPSEISLKGFLALKENFLAYVLSFFWLGTMWVNH HNEWMGIEKISVKTVWTTMLTLFFSSLFPYSTSIVSKNFYNTTAQLFYGVIIIAITITVI VTANTLIEINKMNKYILERLKKRNLLLKYDLIIKIVAFLISAFFYPPAIMIGLFITLIFV VLVIPKKI >gi|292606552|gb|ADGG01000058.1| GENE 54 65347 - 66192 1190 281 aa, chain - ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 281 15 295 297 320 53.0 2e-87 MKYVKLLNGVEMPILGFGVYQIPDLEECERVVLEAIEVGYRSIDTAQVYGNEEAVGNAIK KSGVDRKEFFITTKVWISNSGYEKAKASIEESLKKLQTDYIDLLLIHQPFGDYYGTYRAM EEYYKAGKLRAIGVSNFYPDRFVDIVNFVEIKPMINQVETHVFNQQIIPQEIMKEYGTQI ESWGPFAEGKNNLFTNETLVEIGKKYDKTAAQVALRYLIQRDIVVIPKTVKKDRMIQNFS VFDFELSEDDVKEILKLDKKESLFLSHVAPETVKFLINTKL >gi|292606552|gb|ADGG01000058.1| GENE 55 66203 - 67954 2726 583 aa, chain - ## HITS:1 COG:FN1464 KEGG:ns NR:ns ## COG: FN1464 COG1154 # Protein_GI_number: 19704796 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Fusobacterium nucleatum # 1 583 1 583 583 1039 89.0 0 MYLEKINSPEDVKKFNIEEMKVLAEEIRDAVIKRDAIHGGHFGPNLGMVEATIALHYVFD SPKDKFVFDVSHQTYPHKMLTGRREAFTDEAHYDDVTGYSNQHESEHDHFILGHTSTSIS LALGLVKARDVKGEKGNVIAIIGDGSLSGGEALEGLDLAGELKTNFIVIANDNDMSIAEN HGGLYKNLKLLRETEGKAECNLFKAMGLEYIFVKDGNNIEELIEAFKKVKDIDHPITVHI HTQKGKGYKLSEENKEPWHYVMPFNIEDGKPLNNDDSEDYTDVTKEYLMKKMKEDKTVVT ITAGTPGNFSFSRKEREELGEQFVDVGIAEQTAVALASGMASKGAKPVFTVVSSFIQRAY DQLSQDLCINNNPATIVVSYGGAIGMTDVTHLGWFDIAMMSNIPNLVYLAPTTKEEHLAM LEWSIEQQEHPVAIRLPGGKMVSTGEKVTKDFSKLNTYEVKQKGEKVAILGLGTFYQLGE KAAKLYEEKTGVKATVINPMYITGVDEKLLEELKKDHSVVITLEDGILNGGFGEKIARFY GNSDIKVLNYGLKKEFLDRYNIGKVLTKNRLKADLIVEDLLKF >gi|292606552|gb|ADGG01000058.1| GENE 56 68325 - 69485 950 386 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 376 4 369 405 154 31.0 3e-37 MYKAIKIEIKLTEEQKIQVNKTIGVERFIYNEYIKYNQEQYKSNNKFVSAFDFSKYINNV YLPNNPDKKWIKEVSSKSVKQAMLYGEKAFKNFFKRLSAFPVFKKKGKNELGAYFVKNNK TDFEFYRHKIKIPTLKFVRVKEYGYIPKNAIIKSGTITKIADRYFLSLIMEIEDTVKATN TSSKGLGVDLGIKDTAICSNGKVFKNINKTKKVKKLKKKLKREQRKMSRSVEYSKSKKIK LKECKNFNKKKLKVQKLFYRLNCIRDDYNNKIVDEITRAKLKYITIEDLKVSNMMKNKHL SKAIQEQNFYAIRTKLINKCKERNIELRLVDTFYPSSKTCSCCGEIKKDLKLNDRIYKCC NCGLEIDRDYNASINLEKAKIYKVIA >gi|292606552|gb|ADGG01000058.1| GENE 57 69535 - 69696 184 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783932|ref|ZP_06749254.1| ## NR: gi|294783932|ref|ZP_06749254.1| transcriptional regulator, MerR family [Fusobacterium sp. 1_1_41FAA] # 1 53 1 53 53 90 100.0 4e-17 MNLDLKLSLSNLGDNMTIKEVSEELGLTQDTLRYYEKIGMIPPVTRTEGVQKQ >gi|292606552|gb|ADGG01000058.1| GENE 58 69845 - 70648 1025 267 aa, chain - ## HITS:1 COG:RSc0153 KEGG:ns NR:ns ## COG: RSc0153 COG0501 # Protein_GI_number: 17544872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Ralstonia solanacearum # 23 265 38 274 314 130 32.0 2e-30 MKKIKNIILMLFVSLILISCSTAPLTGRRQLKMVSDEAVAQSSISQYNQMIAELRQNKLL ANNTADGQRINQIGRRISKAVEEYLAANGMQDKIRNLQWEFNLIKSKDINAFALPGGKIA FYTGILPVLKTDAAIAFVMGHEIGHVIGGHHAESASNQNLAGFLMIGKKLIDAVTGVPVI SDDLAQQGLSLGLLKFNRTQEYEADKYGMIFMAMAGYNPQEAILAQQRMMDLGGSQQAEI LSSHPSTQNRIEELKRFLPEAMKYYKK >gi|292606552|gb|ADGG01000058.1| GENE 59 70834 - 71052 351 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197736537|ref|YP_002165315.1| ribosomal protein S18 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 72 1 72 72 139 100 4e-32 MAEFRRRRAKLRVKAEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAVKRAR NIALIPYTRIEK >gi|292606552|gb|ADGG01000058.1| GENE 60 71104 - 71421 527 105 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237739059|ref|ZP_04569540.1| SSU ribosomal protein S6P [Fusobacterium sp. 2_1_31] # 1 105 1 105 105 207 99 2e-52 MGKNQREEVNAMKKYEIMYIINPTVLEEGRDELINQINSLLTANGATIAKTEKWGERKLA YPIDKKKSGFYVLTTFEMDGTKLAEVEAKINIMEAVMRHIVVRLD >gi|292606552|gb|ADGG01000058.1| GENE 61 71487 - 73190 2704 567 aa, chain - ## HITS:1 COG:FN1658 KEGG:ns NR:ns ## COG: FN1658 COG0442 # Protein_GI_number: 19704979 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 567 1 567 567 1062 93.0 0 MRFSKAYIKTLKETPKEAEIVSHKLMLRAAMIKKLASGIYAYLPLGYRTIRKIENIIREE MDRAGALELLMPVVQPAELWQESGRWDVMGAEMLRLKDRHERDFVLSPTQEEMITSIVRS DISSYKSLPLNLYHIQTKFRDERRPRFGLMRGREFTMKDGYSFHTSQESLDEEFLNMRDA YTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANIEKAVSEL INPPKEELREVELVHTPDCPTIESLAKYLDIPLERTVKALTYKDMGTDEIYMVLIRGDFE VNEVKLKNILKAVEVEMATDEEIEKIGLTKGYIGPYKLPTEIKIVADLSVIEVTNHVVGS HQKDYHYKNVNYGRDYKADIVADIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKA MNATYLDENGKTQYMLMGCYGIGVTRTMAAAIEQNNDENGIIWPVSIAPYIVDVIPANIK NEGQVSLAEKIYNELQAEDIDVMLDDRDEKPGFKFKDADLIGFPFKVVVGKRVDEGIVEV KIRRTGETLEVSESEVVAKIKELMKLY >gi|292606552|gb|ADGG01000058.1| GENE 62 73388 - 73837 495 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783937|ref|ZP_06749259.1| ## NR: gi|294783937|ref|ZP_06749259.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 11 149 11 149 149 247 100.0 2e-64 MKTKKLKKIKRVSLDDILQVHPVENGREDVRRFLENERPYFNSQEILKIKRSLYLIEVRN LKIYKNGYNKYKASFNYLGKDYINISMTDPKYKDNDYEYKIAMIMFSLGSEPYEDGNYYK FVVKVLPLTEEGELIDKNEILVCEDEFPF >gi|292606552|gb|ADGG01000058.1| GENE 63 73791 - 74081 320 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783938|ref|ZP_06749260.1| ## NR: gi|294783938|ref|ZP_06749260.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 96 6 101 101 167 100.0 3e-40 MEREVIILAASDKYSNSCVGGVDSKTGEWIRLVSSDTTIHCALTSEMLKCENFECCSPLD KISVSIIKEVPMGHQPENLLIDENKKTKKNKESFFG >gi|292606552|gb|ADGG01000058.1| GENE 64 74101 - 74541 478 146 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1743 NR:ns ## KEGG: Ppha_1743 # Name: not_defined # Def: protein of unknown function DUF1130 # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 146 1 144 144 142 51.0 4e-33 MKLYTIGFTQKSAETFFSLIKKNNVELLIDIRLNNKSQLAGFAKGEDLKFFLKKLSNCEY KYLAEYAPTKEILEGYRKKNIDWDTYVKQYNKLLEERGDYKKFLEKFSSYENICLLCSEA TAEKCHRRLMAELIKKANPKIEIIHI >gi|292606552|gb|ADGG01000058.1| GENE 65 74541 - 75173 629 210 aa, chain - ## HITS:1 COG:no KEGG:Cbei_1525 NR:ns ## KEGG: Cbei_1525 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 5 208 3 204 204 134 37.0 2e-30 MVDVVYTIGYSGFKLDEFIEKIKEYKIDVIIDVRSSPYSQYFKEYNKENICKVLNELEGK KIYYRNYSLEFGARQLDLEGNYYPKGYLDFEKFSQSENFLSGVKKLEDSMKQNYTVVLMC AEKDPFTCHRTILVARAFFKRGYKIIHLMPDGKNLTQEDIEKQLLDKYAKNRHQMGLFNP IVISEEEHINEAYRKHNEKIGYSIEKEEDE >gi|292606552|gb|ADGG01000058.1| GENE 66 75448 - 75759 368 103 aa, chain + ## HITS:1 COG:FN1394 KEGG:ns NR:ns ## COG: FN1394 COG2739 # Protein_GI_number: 19704726 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 103 1 103 103 127 81.0 5e-30 MILDEFIEIANLLEIYSPLLSEKQREYLEDHFENDLSISEIAKNNNVSRQAIFDNIKRGV ALLYEYENKLKFHQIKQDIREKLIDLKEDFTEEKLENIIEDLV >gi|292606552|gb|ADGG01000058.1| GENE 67 75770 - 77104 1981 444 aa, chain + ## HITS:1 COG:FN1393 KEGG:ns NR:ns ## COG: FN1393 COG0541 # Protein_GI_number: 19704725 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Fusobacterium nucleatum # 1 444 1 444 444 764 97.0 0 MLENLGNRFQDIFKKIRGHGKLSDSNIKDALREVKMSLLEADVNYKVVKDFTNRISEKAI GTEVIRGVNPAQQFIKLVNDELVELLGGTSSKLTKGLRNPTIIMLAGLQGAGKTTFAAKL AKFLKKQNEKLLLVGVDVYRPAAIKQLQVLGQQIGVDVYSEEDNKDVVGIATRAIEKAKE INATYMIVDTAGRLHVDETLMNELKELKRAIKPQEILLVVDAMIGQDAVNLAESFNNALS VDGVILTKLDGDTRGGAALSIKAVVGKPIKFIGVGEKLNDIEIFHPDRLVSRILGMGDVV SLVEKAQEVIDENEAKSLEEKIKSQKFDLNDFLKQLQTIKRLGSLGGILKLIPGMPKIDD LAPAEKEMKKVEAIIQSMTIEERKKPDILKASRKIRIAKGSGTDVSDVNKLLKQFEQMKS MMKMFSSGKMPNLGGMGKGGKFPF >gi|292606552|gb|ADGG01000058.1| GENE 68 77155 - 77418 434 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739055|ref|ZP_04569536.1| SSU ribosomal protein S16P [Fusobacterium sp. 2_1_31] # 1 87 1 87 87 171 100 1e-41 MLKLRLTRLGDKKRPSYRLVAMEALSKRDGGAIAYLGNYFPLEDSKVVLKEEEIIKFLQN GAQPTRTVKSILVKAGVWAKFEESKKK >gi|292606552|gb|ADGG01000058.1| GENE 69 77465 - 79042 1935 525 aa, chain - ## HITS:1 COG:FN1655 KEGG:ns NR:ns ## COG: FN1655 COG2461 # Protein_GI_number: 19704976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 4 525 1 512 512 809 84.0 0 METMAKHLPALDEEKLKFVIELKEKYNAGKISLEEARKLLKERVKTLTPYEIAYAEQKIV PFVEDECIKENIQNMMLLFNEVMDTSRPTDLPSDHPIMCYYRENDDMRELLKEVENLIQF PVIKNQWYELYDKLDLWWKLHLPRKQNQLYSLLEKKGFTRPTTTMWVLDDFVRDELKENR KMLDDGNEEEFIASQTSVAADIIDLIQKEETVLYPTSLAMITEEEFEDMKSGDKEIGFTF GELEEVSPKKEINQSESSNISGQGSLAKDLAQLLGKYGFNSGNNSSELDVAMGKMTLEQI NLVFKHLPVDITYVDENEIVKFYSDTAHRIFPRSKNVIGRDVKNCHPRKSVHIVEEIIEK FRNGEQDFAEFWINKPGLFIYICYSAVKDKDGNFRGILEMMQDCTRIRSLQGSQTLLNWE NGTMNSEEVKEEKLEETTEESPREENSNSQIPLDSINKDTYLKDLIKVYPNLKKDMIKIS ERFKILQGPLAAVMLPKATLEKVSEKGDIDLNTLIEKIKELIKTY >gi|292606552|gb|ADGG01000058.1| GENE 70 79194 - 80570 1230 458 aa, chain + ## HITS:1 COG:FN1653 KEGG:ns NR:ns ## COG: FN1653 COG0534 # Protein_GI_number: 19704974 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 14 456 1 443 445 542 68.0 1e-154 MNLIKNRELRNDIMKTMFKNNDLTQGKIWKVILNFTLPIFLGTLFQSLYTTIDAIIVGKF AGKDAFAAIESVMSFQRLPVSFFIGLSSGATIIISQYFGAKEKEDVSKASHTAMLFAIVG GLILSILSCILSPYFIGLIKVPQKIFHEAYIYTFICFSGMVFSMIYNIGSGILRALGNSK TPFHILILANILNIVLDLIFVIKFDLSVVGVGLATLISQVVSAILIFVVLMRTNLDCRIY IKKLTFYKKYLKKIFVLGLPIAIQSVIYPIANTTIQSKINMFGVNSIAAWAISGKLDFLI WSVSDAFCISSSTFVAQNYGAKKHHRVKKGIISSVIMSISMILVISLTLFIWSKDLAPFL IEDREVIELTSEILSILAPFYFIYTIGDVLAGAIRGLGDTFYPMLINVLAICGVRLLWIF FVFPLNPTFFMILYSYLISWSVNTIAFLIYIYFKRKKI >gi|292606552|gb|ADGG01000058.1| GENE 71 80691 - 81461 1075 256 aa, chain - ## HITS:1 COG:FN1512 KEGG:ns NR:ns ## COG: FN1512 COG2849 # Protein_GI_number: 19704844 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 250 42 285 396 131 36.0 1e-30 MKRFFTILILMLSVFSIVSAHPFKSEKELYDFYAEIDKKIFAEKNKPIVRKKFPRKLTKE EQSKVPLDNRNYTVEEVIGNDKLVYSAFDNHLMYIFQLNQKGKEEGVSRFFDEDENLVKI CYGSDLNGLMGILREYDSNGKLIIEIPYYAHKVNGNRKIYYESGALREDYHYYNDKEDGQ GIVYFENGQKMQVENYKNGLKVGDYYQYFEDGTLATKGFFVNGKEEGVFELYDREGKKFK ELVFKKGKKIEEREIK >gi|292606552|gb|ADGG01000058.1| GENE 72 81486 - 82793 1578 435 aa, chain - ## HITS:1 COG:FN1512 KEGG:ns NR:ns ## COG: FN1512 COG2849 # Protein_GI_number: 19704844 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 364 42 393 396 198 38.0 1e-50 MRKIFIILFLMLSIFTVINAHPFKTEKELQDFYAKIDKEVDKELKKDYIKLFEERKANLK EKASNNDTKKMLEDNEYLFVFKNGKLEKVFKKDILDGKFIILSYIYENGKKRKIVCLNKE NSHYYGTVKGFEEDGNPLYSGQFYDGKMEGIYKEYYDSGKILKESHFSNDKKNGLEKIYY ENGKISSIKNYKDGKADGEYIEYYTDGELKLKGRYNNGLREGEFKTYLMNAKSAGSVFYK DGKEIKSTLTDYMKEDVFFNFPDEIKAQMNVGDEKEKELIKKMEEHGGYHMLGIDTYPNG RVMRVVPYNQQGIYDGTFRQYYESGQLEQKGYYKNGLGQGEYIWYYEEGSIKQKVFYKDD KIEGIVTSFYPDGKIAQTVNHINGKREGELIEYYENGQIKEKRFYVNDKEEGKSLFYDEK GKLIKTEIYKNDVKQ >gi|292606552|gb|ADGG01000058.1| GENE 73 82821 - 84413 1694 530 aa, chain - ## HITS:1 COG:FN1515 KEGG:ns NR:ns ## COG: FN1515 COG2849 # Protein_GI_number: 19704847 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 19 530 19 555 555 575 65.0 1e-164 MRKSFLVLIFLFFTFSILNAKPLKNEAELQNIRNKADKIVQEELKNDYKKEYLKRKNNLE KIEGVKENVFSDGEFKFRLKDGVVTEALKTIETAHNTTVAKKFDEEGKLLTVIFFSNDEN LRFYRYYDENLNLAIDINCIDGKCIQKGYYSDKKLAYIKEGKLTENLDILTNGKYTEYYK NGQIKIQGSYKEGMRNGEFKTFLKNGKSAGFIIYKDGKIIKSTLVKSMKDNASFSPISYA NYDLDTSYSIGGVNFPNKLLKRYRMYDKKGVLNGNSISYYEEGNIQSIFPYKNNLIEGLV IRYYENGNIKEEVNYKNDKMNGEAKSYDENGKLNGRTIFKDDIRLEDDVYKENEILKNTF KNGELVKQDICTLNGTLKERKILNGNEMEYSTFYPNGNVKQKILTKDKIIIKEQIYARNG NIMSNSFFSDGKPVIEYFEYYPDGKLFRKISTINKMLNGDSIEYYPNGNIKEKISFVDDK MNGEDIEYYENGVVKEKSYFINDEEEGEHFFYDEKGKLIKTEIYKNGIKQ >gi|292606552|gb|ADGG01000058.1| GENE 74 84429 - 85988 1516 519 aa, chain - ## HITS:1 COG:FN1514 KEGG:ns NR:ns ## COG: FN1514 COG2849 # Protein_GI_number: 19704846 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 44 519 1 503 503 579 70.0 1e-165 MKKFFVTLILMLSVFSIANAHPFKTEKELNNFFSKIDQLIKEELKKDYREEMTKRKGTAD REYTFEMEDDRTVLITRSIAGIKPETEITQYFNSEGKLYMISSLTSETEKDLYALYRKYD KNGNLFIYSYAIDGKNTDRGYYSDGKLAYILELKIIKGQPPIPNGKYIEYYKNGQIKVQG NNKDGKRDGEFKAFLRNGKSAGSVFYKDGKIIKSTLVKAMKDNASFSLVTDKSYDLNLYE IITEEFKNKLLEGYLIFKKDGLFNGEKREYYEEGEIKAITPFKNSLAEGTYISYYQNGNI KVKNTYKNGNEEGEGLFYYENGQLEEKYFMKNGKLDGEAINYFEDGKIRNKAIFKDGIIL EEEVHENNEIKKNIFKNEEIVQQDIYTKNKILKATIFFLENEKTKIITYHKNGNKQEEVF SINGLLDGEAFIYYPSGKLENKSFFKNGKREGESLTYYENGKLKKKILYKNGIAIVYYEN GMIEEKAYFVDDKKENERLYYDKKGNLIKTEIYKNNVKQ >gi|292606552|gb|ADGG01000058.1| GENE 75 86010 - 86924 1403 304 aa, chain - ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 299 1 301 303 328 53.0 9e-90 MPIRVANDIPAKNQLTEEGIIFIEEARANTQDIRPLNILILNLMPKKEETETQLLRLIGN SPLQINVEFLMVKDHESKNTNLSHIEKFYQYFDDIKDNFYDALIITGAPVEQMEYEEVDY WKELQKIFEWSKTHVFSCLHICWAAQARLYNDYKIAKTIQPAKVFGVFEHEIVESGNPLI RGFSDVFLAPHSRHTHIDENKLASTKELEILAKSEVGSLLISTEDLRKIFITGHLEYDRE TLLGEYRRDKDKGLEIQVPVNYFPNDDDTKKPLQTWKTTAHLFYHNWLNAVYQLTPYDLK DLAK >gi|292606552|gb|ADGG01000058.1| GENE 76 87162 - 87629 553 155 aa, chain + ## HITS:1 COG:no KEGG:FN0234 NR:ns ## KEGG: FN0234 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 155 1 146 147 125 50.0 4e-28 MKKFLIFLLAVLALTFVACGKDKDIESYLDMERINSEFNIEKQDKEQIKFTDKDKSRSAY RIFNFQKMKSVDFKNPKKIDKLEEFYLGKNCDIIYKDESTIIVLVLAQDHSYAYNIQSFD DSKTELMIAVSIGSDKELSEDELFNLLDEAKSFLK >gi|292606552|gb|ADGG01000058.1| GENE 77 87665 - 88132 603 155 aa, chain + ## HITS:1 COG:no KEGG:FN0234 NR:ns ## KEGG: FN0234 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 12 155 1 146 147 120 52.0 2e-26 MKKILVLFLSLLALAFVACGKEKDIRDILDKEKISSEFNIVEESEKYFEFKDKDDNRDVF RIFMYEKILSVDFKNPKKIDSLEEGYIEQGCDIIYKDKDTIMIGIFDPEVGYGYNIHNFD NSKTTLEIIVAIGSQDELSEKDLFEILKEAKSFIK >gi|292606552|gb|ADGG01000058.1| GENE 78 88185 - 88733 750 182 aa, chain + ## HITS:1 COG:no KEGG:FN0234 NR:ns ## KEGG: FN0234 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 53 182 15 147 147 108 47.0 9e-23 MKKITMFFLAVLALTFVACGKGEGGIVDKIKSLDNTTSQSETSTDSLDHGDKGEYLDIDK IVSEFDIAEEDEEHIEFQDRDQERAVFRIFIFEKMNKLDFKNPDRMDILENFYIEKNCDI VYKDDETIIIKLEQGGALAYNIHNFDDTKTELAVIVSIGTDRELSENELFDILKEAKSFI KK >gi|292606552|gb|ADGG01000058.1| GENE 79 88770 - 89756 1129 328 aa, chain + ## HITS:1 COG:FN0232 KEGG:ns NR:ns ## COG: FN0232 COG4859 # Protein_GI_number: 19703577 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 18 82 1 65 65 115 81.0 8e-26 MKKYVENAGSCIVTKSILNGETKFRWLFREEPLNNIDTGWMAFGDSDNDEYVNDPKNLTV VDLNTLINIEPTILNVYEMPVGTDLIFIEEDGEKYFINAKTNEQIREKVKSPFMIAFENN LNFLRKDEYSKEFIENLFIESNKISLHTIGEVDFPTGRVIIADPLCYLHSEENRKILDRT IPIGKYEVELAILNSKTVFKRVIGARLKIKNDKIIRYEQTQNISSSFNGFGVDAGLASFC DASVAEEYTKFWYDWIKNNPNKNHYNDYFSKFFQRKQFIHWEIPGTNHKITMFETGFGDG YYMSLYGLNEKDEVCELVIPFINPELVD >gi|292606552|gb|ADGG01000058.1| GENE 80 90025 - 91368 804 447 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 3 447 2 445 456 314 38 1e-84 MESLELFLTTVNKWLWGRWLVYVLLALGILYTFTNGFIQVRYFKFIMKKTLVDSFKARND EKGSGSISTFKAMMVTLAGNVGGGNVVGVATAVAAGGMGAVFWMWVAAFFGMALKYGEIV LSQLYRGKDSEGNLLSGPMYYIRDGLKAPWLGIVIAVLMCTKMMGANLVQSNTISGVLKS NYNVPTWLTGVILICCLMAVVLGGLKRLANIATSLVPIMSIFYVAVGLLVILLHIQEVPG VFKEIFTQAFSMKAAAGGTGGYIIARAMQYGITRGMYSNEAGEGTAPFAHGSAIVDHPCE EGITGVTEVFLDTIIICSITAIVIGVTGIYQSDLSPAVMAIESFGTVWEPLKHLATFALL LFCFTTLMGQWFNAAKSFTYAFGPKVTDKVRFVFPFLCIIGAITKISLVWTIQDVAMGLV IIPNLIALIILFPQVSKQTKDYFSKQK >gi|292606552|gb|ADGG01000058.1| GENE 81 91381 - 92109 1012 242 aa, chain - ## HITS:1 COG:BS_yqiK KEGG:ns NR:ns ## COG: BS_yqiK COG0584 # Protein_GI_number: 16079474 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Bacillus subtilis # 1 235 1 237 239 197 42.0 2e-50 MTKNFAHRGFSGKYPENTMLAFEKAVEIGADGAELDVQLTKDGEVVIIHDETIDRTTDGK GYVVDYTYEELSKFNASYIYTGKMGFNKIPTLKEYFELVKDLDFVTNIELKTGINQYLGI EEKVYKLIKEYKLEKKVIISSFNHFSVLRMKKIAPELKCGFLSEDWIIDAGAYTASHGIE CFHPRFNNLIPEVVEELKKNNIEINTWTVNKEEDIKDLINKGIDILIGNYPDLVKKIINE NK >gi|292606552|gb|ADGG01000058.1| GENE 82 92394 - 92996 854 200 aa, chain - ## HITS:1 COG:no KEGG:FN1346 NR:ns ## KEGG: FN1346 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 199 1 199 200 265 74.0 6e-70 MSIVEKYLKELKRAYYKNGGKEIWDNFEKIKEGASEEDIKKLKEEYPEVPDSLIELLKNV DGTYFRKYKGETVVFYFLGSDVEEYPYYLLSSSQILESKDDAYKYYADYVDRKYEEVEID EEIINDSKKMRWLHFSDCMNNGGTSQLFIDFSPSEKGVKGQIIRYLHDPDEIAVIADSFD EYLEELMEYDFDFIFEDTME >gi|292606552|gb|ADGG01000058.1| GENE 83 93059 - 93760 969 233 aa, chain - ## HITS:1 COG:FN1347 KEGG:ns NR:ns ## COG: FN1347 COG1359 # Protein_GI_number: 19704682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 17 233 1 218 218 303 74.0 1e-82 MLKKLLVGLAMLTSVSMYAVPTLNVYNFEVKNDKEASYKSITEDYVNKTAVEQGVLGLFA TTDDRDKLNSYVIEIYNDYLAFSNHTKNQTSADFKAMIPQIAEGNLNATDVEVQFAKDKK IEQNENTFAVYTVIEVKPENNTEFATFIKNRAEASFNENGTLLVYVGTDRRSPNKWCVFE VFTDMDSYLNQRAASYSKNFITETKDMVISQKRAELQALKLINQGGLDYKKLY >gi|292606552|gb|ADGG01000058.1| GENE 84 93792 - 94463 309 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 220 1 221 245 123 35 3e-27 MLEIKNISKSYNRQGKDFFAVKDVNLNISDGDFIHIIGKSGSGKSTFLNIVAGLLSADKG SLSLDGTNYMELPDEEKSEFRNKNIGFIPQSPALLSYLNVLENIRLPYDMYEKEGDSEGK ARYFLNELGLEHLAKSYPKELSGGELRRIIIARALMTEPKILIADEPTSDLDIEATKEVM DLLKKINEKGTTVLVVTHELDTLKYGKKVYTMSEGILEDGKKL >gi|292606552|gb|ADGG01000058.1| GENE 85 94472 - 95677 1549 401 aa, chain - ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 401 1 401 401 671 92.0 0 MSKRIDANSLAMENIRQRKTRSTCMILLVALFSIIVYMGSMFSLSLSRGLESLSDRLGAD VIVVPAGYKAEIESVLLKGEPSTFYLPADTMDKLKKFDEIEKMTAQTYVATLSASCCSYP VQIIGIDIDTDFLIYPWITHNIDKELKDGEAIVGSHVIGEKGETVHFFNEELKIVGRLKQ TGIGFDATVFVNQNTAKKLARASERITANKVAEEDVISSVMIKVKPGVDSVKLASKISKE LSKEGIFAMFSKKFVNSISSNLKVLATSVLILVVAIWLLSVIILSISFTAIFNERKKEMA VLRVLGASKKMLRNIIIKEAVILSLIGAGIGSFLGFILSIIELPLIASKFSMPFLSPSIM QYIGIFVLSFVLAVIIGPLSTVRVVKKLTDKDSYLSLREEM >gi|292606552|gb|ADGG01000058.1| GENE 86 95681 - 96010 399 109 aa, chain - ## HITS:1 COG:no KEGG:FN1350 NR:ns ## KEGG: FN1350 # Name: not_defined # Def: integral membrane protein # Organism: F.nucleatum # Pathway: not_defined # 1 109 37 145 145 158 85.0 5e-38 MACYFSGNAVMKIAVAIFIITLLMILLSKIKIVKIIGAIATIVLSAYVYLVPHGMSGLQN EMGKPFGVCKIDTMHCHVHHTFEIATGIAVVIGLLMVFSLISTFLKKED >gi|292606552|gb|ADGG01000058.1| GENE 87 96185 - 96412 305 75 aa, chain - ## HITS:1 COG:FN1351 KEGG:ns NR:ns ## COG: FN1351 COG4939 # Protein_GI_number: 19704686 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Fusobacterium nucleatum # 1 75 66 140 140 114 89.0 4e-26 EFRDGKGNVKGDDYGKEAGDEKYRKAQIAVEGFSTYADKLVEVQDPNEVDAVSGATVSNK EFKEAVWDALEKAKK Prediction of potential genes in microbial genomes Time: Thu May 19 22:40:29 2011 Seq name: gi|292606551|gb|ADGG01000059.1| Fusobacterium sp. 1_1_41FAA cont1.59, whole genome shotgun sequence Length of sequence - 23283 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 11, operones - 7 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 79 - 501 672 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein - Prom 574 - 633 12.5 2 2 Op 1 36/0.000 - CDS 865 - 1563 307 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 2 Op 2 10/0.000 - CDS 1567 - 2769 1639 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 4 2 Op 3 4/0.000 - CDS 2779 - 4059 1702 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 5 2 Op 4 . - CDS 4061 - 5347 1470 ## COG4393 Predicted membrane protein - Prom 5422 - 5481 7.5 + Prom 5525 - 5584 12.3 6 3 Tu 1 . + CDS 5618 - 5797 314 ## PROTEIN SUPPORTED gi|237739029|ref|ZP_04569510.1| LSU ribosomal protein L32P + Term 5801 - 5873 21.5 7 4 Op 1 1/0.250 - CDS 5841 - 6599 510 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 8 4 Op 2 4/0.000 - CDS 6599 - 7300 358 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 9 4 Op 3 49/0.000 - CDS 7300 - 8067 588 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 10 4 Op 4 38/0.000 - CDS 8067 - 8984 509 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 11 4 Op 5 . - CDS 8994 - 10481 1779 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 10513 - 10572 4.8 12 5 Tu 1 . - CDS 10654 - 11493 760 ## FN1720 hypothetical protein - Prom 11544 - 11603 6.2 + Prom 11519 - 11578 11.0 13 6 Op 1 . + CDS 11711 - 11983 287 ## FN0686 integral membrane protein 14 6 Op 2 . + CDS 11996 - 13450 1702 ## COG4145 Na+/panthothenate symporter - Term 13487 - 13532 -0.5 15 7 Op 1 . - CDS 13687 - 14391 1050 ## COG0813 Purine-nucleoside phosphorylase 16 7 Op 2 . - CDS 14391 - 15080 990 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Term 15087 - 15122 4.1 17 7 Op 3 . - CDS 15133 - 15450 538 ## COG1799 Uncharacterized protein conserved in bacteria - Prom 15485 - 15544 20.0 + Prom 15501 - 15560 16.4 18 8 Op 1 30/0.000 + CDS 15665 - 16273 630 ## COG0811 Biopolymer transport proteins 19 8 Op 2 11/0.000 + CDS 16276 - 16665 526 ## COG0848 Biopolymer transport protein 20 8 Op 3 . + CDS 16674 - 17477 674 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 17522 - 17578 12.1 + Prom 17569 - 17628 6.7 21 9 Op 1 35/0.000 + CDS 17657 - 19372 1821 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 22 9 Op 2 . + CDS 19376 - 21100 2039 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Term 21097 - 21156 15.1 23 10 Op 1 . - CDS 21178 - 21480 395 ## FN0905 hypothetical protein 24 10 Op 2 1/0.250 - CDS 21523 - 22530 1382 ## COG0240 Glycerol-3-phosphate dehydrogenase 25 10 Op 3 . - CDS 22546 - 22848 244 ## COG4123 Predicted O-methyltransferase - Prom 22881 - 22940 5.8 26 11 Tu 1 . - CDS 23118 - 23282 212 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606551|gb|ADGG01000059.1| GENE 1 79 - 501 672 140 aa, chain - ## HITS:1 COG:FN1351 KEGG:ns NR:ns ## COG: FN1351 COG4939 # Protein_GI_number: 19704686 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Fusobacterium nucleatum # 1 140 1 140 140 221 87.0 2e-58 MKKYLLVGMVVALSLLTACGKKDFSKMSFNDGEYQGHFNNDDKDHPSTADVNITIQDGKI VACTAEFRDGKGNVKGDDYGKEAGDEKYRKAQIAVEGFSTYADKLVEVQDPNEVDAVSGA TVSNKEFKEAVWDALEKAKK >gi|292606551|gb|ADGG01000059.1| GENE 2 865 - 1563 307 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 218 1 218 245 122 30 2e-27 MDNREVLLEVKNVSKIYGDLHALKEVSFQVRKGEWVAIMGSSGSGKSTMMNIIGCMDKPS IGEVILDGQDITKESQNSLTKIRREKIGLIFQQFHLIPYLTALENVMVAQYYHSIPDEQE ALQALERVGLKDRAKHLPSQLSGGEQQRVCIARALINSPEIILADEPTGNLDEINEKIVI DILTQLHEEGSTIIVVTHDLEVGDVAERKIILEYGKIVNDIDQKQFGKKKQS >gi|292606551|gb|ADGG01000059.1| GENE 3 1567 - 2769 1639 400 aa, chain - ## HITS:1 COG:FN1353 KEGG:ns NR:ns ## COG: FN1353 COG0577 # Protein_GI_number: 19704688 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 400 1 400 400 660 97.0 0 MTKKQMYIKLVVSSLIRRKARMIVALLAVAIGATIMSGLVTIYYDIPRQLGKEFRSYGAN FVVLPSGNDKITETEFDKIKTEMSTQKIVGMAPYRYETTKINQQPYILTGTDMIEVKKNS PFWYIEGEWSTNDDENNVMIGKEISKKLNLQIGETFIIEGPKAGAKVVASKQSDSAEESK KKDLNSDFYSKKLKVKGIITTGGAEESFIFLPISLLNEILEDDTKIDSIECSIEADSKQL ESLASKLKAADENITARPIKRVTQSQDIVLGKLQALVLLVNIVVLILTMISVSTTMMAVV AERRKEIGLKKALGAYDSEIKKEFLGEGSALGFIGGLLGVGLGFVFAQEVSLSVFGRAIE FQWLFAPITIIVSMIITTLACLYPVKKAMEIEPALVLKGE >gi|292606551|gb|ADGG01000059.1| GENE 4 2779 - 4059 1702 426 aa, chain - ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 426 3 428 428 759 92.0 0 MFWRMVKGTLFRQRSKMLMIAFTVALGVSLATAMMNVMLGVGDKVNKELKTYGANITVMH KDASILDDLYGISGETVSNKFLLESEIPKIKQIFWGFAILDFAPYLERTGEIKGVSDKVK IYGTWFEKHLVMPTGEETDAGIKNLKTWWEVKGEWLNDDDLDGVMVGSLIAGKNNLKVGD TIEVKGTNETKKLTIRGIINSGGNDDEAIYTALKTTQDLFGLEGKITMIDVSALTTPDND LARKAAQDPNSLTISEYETWYCTAYVSSISYQLQEVLTDSVAKPNRQVAESEGTILNKTE LLMLLICILSSFASALGISNLITASVIERSQEIGLIKAIGGTNRRIILLILTEVVLTGIL GGIFGYLAGIGFTQIIGKTVFSSYIEPAVIVVPIDIALVFAVTIVGSIPAIRYLLTLKPT EVLHGR >gi|292606551|gb|ADGG01000059.1| GENE 5 4061 - 5347 1470 428 aa, chain - ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 131 428 1 298 298 545 90.0 1e-155 MLKFYIDVINYLAIFAFLLGIITALLVKYKKLYLNIVVGLVSLVGLACSVTMTVFKQLYP QKMVKISLQYNRWALAIGMLFMLVALVLQIIKTFRKCENDKLCIASAISIIFSTVAVWFL GFTIIPQVYAMTKEFVAFGENSFGTQSLLRLGGFLLGLLTIFLIALSVQKVYFRLKPCLA KVFALAIFFVGSIDFFLRGISALARLRFLKSSNPFVFNVMILEDKSTTYITILFAIVACI FSFLLFKDSRKVVGTFKNNALLRLEKARLKNNKHWLSSLAFFSILSVFAITVIHSHITKP VALTPPQPYQEEGNMIVIPLTDVEDGHLHRFSYTATGGNNVRFIVVKKPKGGSYGIGLDA CDICGLAGYYERNDEVVCKRCDVVMNKSTIGFKGGCNPVPFEYEIKDKKIYIDKATLEKE KDRFPVGD >gi|292606551|gb|ADGG01000059.1| GENE 6 5618 - 5797 314 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739029|ref|ZP_04569510.1| LSU ribosomal protein L32P [Fusobacterium sp. 2_1_31] # 1 59 1 59 59 125 100 3e-28 MAVPKKKTSKAKKNMRRSHHALTAIGLVTCEKCGAPKRQHRVCLECGDYKGSQVLETAE >gi|292606551|gb|ADGG01000059.1| GENE 7 5841 - 6599 510 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 238 11 265 329 201 38 5e-51 MLLTVENLSKEYIKKKTLNNVSFSMEKGEILGMLGKSGAGKSTIGKILLQLSRPTTGTIL FEGKALSEVPRRDIQAIFQDPYSALNPSLKIGEILEEPLIANGKFTKEERRKKVEETLVK VGLLESDYEKYPEELSGGQQQRVCIAGAIILSPKLIICDEPIASLDLAIQVQILDLIQKI NQEEGISFIFITHNLPAVYRIADRILLLYRGEVQEIQEVEEFFKNPKSEYGKKFLKTLNL IKNFNNFIKKLS >gi|292606551|gb|ADGG01000059.1| GENE 8 6599 - 7300 358 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 221 31 261 329 142 37 2e-33 MEILKIKNLNLKIREKEILKNVSLEIKEGEVIGLIGESGSGKTIFTKYILGILPLAAQYT QETFEVVPKVGAIFQNAFTSLNPTMKIGKQLKHLYVSHYGTQENWKEKIESLLEDVGLDK NRNFLDKYPYELSGGEQQRIVIMGALIGEPSFLIADEVTTALDVGTKIEVVKFFKRLREK FKISILFITHDLSTLKNFADKIYVMYHGEIVDEDHPYRKQLFQLSQDVWRRTK >gi|292606551|gb|ADGG01000059.1| GENE 9 7300 - 8067 588 255 aa, chain - ## HITS:1 COG:FN1361 KEGG:ns NR:ns ## COG: FN1361 COG1173 # Protein_GI_number: 19704696 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 255 1 255 255 402 92.0 1e-112 MKKWQYFILILVGIIFCISFYQNPYKISENFTLLKPSFQHILGTDNLGRDIFSRLLLGTF HSIFLAFSAILLAAIVGSILGAVAGYFGGYIDEFFLFISEIFMSIPVILITLGIIVLLNN GFHSIILALFVLYMPRTLSYVRGLVKREKHKNYIKIARIYGVSNFRIMRRHIAPNIILPI LVNFSTNFAGAILTEASLGYLGFGIQPPYPTLGNMLNESQSYFLLAPWFTILPGLMILFL VYKINQISRKYQEKK >gi|292606551|gb|ADGG01000059.1| GENE 10 8067 - 8984 509 305 aa, chain - ## HITS:1 COG:FN1360 KEGG:ns NR:ns ## COG: FN1360 COG0601 # Protein_GI_number: 19704695 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 305 1 305 305 487 94.0 1e-138 MYYIKKIFRMLLSVFSIGTFSFLLLELIPGEPETTILGVEASAKDLENLREQLGLNLSFG TRYWNWLCGVFQGDLGISFKYKEPVFKLILERLPLTLKIAFISIFIIFLVSIPLSFFLHN TKSKRIKKIGESIFSIFISIPSFWLGIIFMYLFGIILKWTSTGYNNSWQSLILPCIVISI PKIGWISMHLYSNLYKELREDYIKYLYSNGMKKIYLNFYILKNAFLPIIPLTGMLLLELI TGVVIIEQIFSIPGIGRLLVQSVLMRDIPLIQGLIFYTSTFVVLLNFVIDILYSLLDPRI QVGDQ >gi|292606551|gb|ADGG01000059.1| GENE 11 8994 - 10481 1779 495 aa, chain - ## HITS:1 COG:FN1359 KEGG:ns NR:ns ## COG: FN1359 COG0747 # Protein_GI_number: 19704694 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 495 1 495 495 843 87.0 0 MKRNLFFGKILLSILLTFVFVACQKEENKEESIRTVSTVDIDSLNPYQVVSSNSDQILLN VFEGLVMPGTDGTVIPALAESYEVSEDGKTYTFTIRKGVKFHNGNDMDIKDVEFSLNYMS GKLGNAPTEALFENIEKIEVLDDSHIVIHLSEPDSSFIYYMKEAIVPDENKDHLNDTAIG TGPYKISEYQRDQKLVLSKNEEYWREKAKIPTVSILISPNSETNFLKLLSGEINFLSGID SKRIPELDKYQILNSPSNLSLILALNPKEKPFDDIEVRKAINLAIDKNKIIQLAMNGKGS PIYTNMSPVMSKFLWAAPEEKADPQKAKQILEEKKLLPIKFTLKVPNSSKIYLDTAQSIK EQLKEVGITVDLEIIEWATWLSDVYTNRKYEASLAGLAGKMEPDAILRRYTSTYAKNFTN FNNARYDALIEEAKRTSNEAKQVENYKEAQKILAEEQAAIFLMDPNTIIATEKGLEGFEF YPLPYFNFAKLYFKK >gi|292606551|gb|ADGG01000059.1| GENE 12 10654 - 11493 760 279 aa, chain - ## HITS:1 COG:no KEGG:FN1720 NR:ns ## KEGG: FN1720 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 45 279 3 241 242 203 53.0 6e-51 MIEITKENDEIEIVKSYKKIIKYSQAFMIFVILLFSFVTFKLSEMIFNPLSIMIFIYFII FSFFAISYEKITIKENNILLEAIRNNKRICYSQKIFLDEINKIYFKSSFWGGRLDLLTYS IVTFDRYLKIETNKKTYSFGKIIDYEDYLKIYRTLTEKVREYKAEKIILDKERNREEELE AIYKLGVEERYIEILNAIIDEEKLFISKKEENFLIDAINKSKDSQETDFYVFYVDYLSKK EYENKKVLLGYNGIDGKEVTMSKLKEDINKLRDDRSTFK >gi|292606551|gb|ADGG01000059.1| GENE 13 11711 - 11983 287 90 aa, chain + ## HITS:1 COG:no KEGG:FN0686 NR:ns ## KEGG: FN0686 # Name: not_defined # Def: integral membrane protein # Organism: F.nucleatum # Pathway: not_defined # 3 90 17 104 104 121 81.0 7e-27 MKISKQINKEVLITIALYLIYFVWWYYFAYEYGSDNVEEYKYILGLPEWFFYSCVIGLVL INVLVYICIKLFFKDVDFEEYNNKDKKLDK >gi|292606551|gb|ADGG01000059.1| GENE 14 11996 - 13450 1702 484 aa, chain + ## HITS:1 COG:FN0685 KEGG:ns NR:ns ## COG: FN0685 COG4145 # Protein_GI_number: 19704020 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Fusobacterium nucleatum # 1 484 1 484 484 717 89.0 0 MDKILIIIPILLYLSAMLFIAYRVNKIKISSESFTNEYYIGGRSMGGFVLAMTIVATYVG ASSFIGGPGIAYKLGLGWVLLACIQVPTAFFTLGVLGKKLSIISRKLDAITIFDVLKARY NNNFLNILSSIMLIIFFISAIVAQFIGGARLFEAVTGLSYTTGLIIFSSVVIIYTTFGGF RAVTLTDAIQAVVMFAATIVLFFVILRHGNGMENIMMKIKEIDPNLLKPDSGGDIAKPFI MSFWILVGIGILGLPATTIRCMAFKDAKAMHNAMIIGTSLVGVLVLGMHLVGVMGRAIIP DLQEVDKIIPILALKNLYPILAGVFIGGPLAAVMSTVDSLLIISSSTLIKDLYVTYLDKN ASENKIKKISMWTSFLIGLLVFILSVKPISLITWINLFALGGQEIVFFCPLILGLYWKRA NATGAIASIFFGIVAYLYLEITKTKIFALHNIVPGLVVALTAFIIFSLIGKKSDEKTIEV FFEY >gi|292606551|gb|ADGG01000059.1| GENE 15 13687 - 14391 1050 234 aa, chain - ## HITS:1 COG:FN0435 KEGG:ns NR:ns ## COG: FN0435 COG0813 # Protein_GI_number: 19703773 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Fusobacterium nucleatum # 1 234 7 240 241 382 83.0 1e-106 MSVHIAAKNSEIADTVLLPGDPKRAKWIAENFLENAVCYTDIRGMLGFTGTYKGKRISVQ GTGMGIPSISIYITELMKDYGVKTLIRVGSAGSYQEEVKIRDIVVALSTSTDSNINNRRF KGASFAPTVNFDLLSKVLKTAEEKNIKIKAGNILTSDEFYNDDPSYFKKWAEFGVLAVEM ETAALYTLASKYKAKALSILTISDSLVSPEITSSEEREKTFNEMIELALETAIK >gi|292606551|gb|ADGG01000059.1| GENE 16 14391 - 15080 990 229 aa, chain - ## HITS:1 COG:CT268 KEGG:ns NR:ns ## COG: CT268 COG0860 # Protein_GI_number: 15604989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Chlamydia trachomatis # 23 226 60 239 259 82 29.0 5e-16 MKRILLMLFILFSATVLSKEKYVVCLDPGHQTKGNPALEEIAPNSDKKKAKVTTGTRGVV TKKYESELMLEIALKLKTSLESKGYKVIMTRTKNDVDISNKERAIFANDNKADVYIRLHA DGSENKNAAGASVLTSSPKNKYTKKVQKESEEFSKILLEEYVKATGAKNRGLIYRDDLTG TNWATVPNTLIELGFMSNAEEDKKLSEKDYQDKIVKGLVNGIERYLGGK >gi|292606551|gb|ADGG01000059.1| GENE 17 15133 - 15450 538 105 aa, chain - ## HITS:1 COG:FN1010 KEGG:ns NR:ns ## COG: FN1010 COG1799 # Protein_GI_number: 19704345 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 6 102 4 97 98 130 74.0 4e-31 MADNSNVDIVFLKPSKFEDCVICAKYIKEDKIVNMNLSQLDDKDSRRVLDYVAGAIFITK ADIINVGNRIFCSVPADKSFLNETDRESVRDRDYETEEEIIRKDI >gi|292606551|gb|ADGG01000059.1| GENE 18 15665 - 16273 630 202 aa, chain + ## HITS:1 COG:FN1312 KEGG:ns NR:ns ## COG: FN1312 COG0811 # Protein_GI_number: 19704647 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 1 202 1 202 202 322 84.0 3e-88 MLHYLQVGGPILWVLTIISIAAFAVILERIAFFSRNEKAVGNTFKEEILSLVANKKIDEA RNLCASKKSCVASAVKKFLEKAEKGMEVQDYEFILKEITIQETSPYESRLNLLSSIISIS PMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR RLEKMENEIDDIVTNIINIFRR >gi|292606551|gb|ADGG01000059.1| GENE 19 16276 - 16665 526 129 aa, chain + ## HITS:1 COG:FN1311 KEGG:ns NR:ns ## COG: FN1311 COG0848 # Protein_GI_number: 19704646 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Fusobacterium nucleatum # 30 129 1 100 100 155 89.0 2e-38 MSKYKKSRESAKLDLTPLIDVVFLLIIFFMVTTTFNNFGSVQIDLPSSTIQQTDKTKSIE IIIDKDGNYHISEDGKITQIQFSEIDSYLKTAKEATVSADKNLKYQVIMDVITKIKENGV DNLGLSFYE >gi|292606551|gb|ADGG01000059.1| GENE 20 16674 - 17477 674 267 aa, chain + ## HITS:1 COG:FN1310 KEGG:ns NR:ns ## COG: FN1310 COG0810 # Protein_GI_number: 19704645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 34 266 12 242 242 211 61.0 1e-54 MKKYVLISLIVHLAILFLFATIKTDEVEKEKLVKNEVVPIAFVAKQTSNNPGAKTLDTQE REKPKEEKPKSEPKIEKKIEEKKVEEKKPVEKPIEKKAEKTEEKKIESNIPSKNEPSHSD TSSKSSSESSSTSSSDKSSNHSSDGGSPNGNSSGEDLGSNFIADGDGTYIALTSEGINYQ IINEVEPDYPSQAESIGYSNQVKVTVKFLVGLKGNVEKAEIIKSHKDLGFDAEVMKAIKK WRFKPIFHKGKNIKVYFTKTFVFEPQQ >gi|292606551|gb|ADGG01000059.1| GENE 21 17657 - 19372 1821 571 aa, chain + ## HITS:1 COG:FN0614 KEGG:ns NR:ns ## COG: FN0614 COG1132 # Protein_GI_number: 19703949 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Fusobacterium nucleatum # 1 571 8 578 578 945 93.0 0 MKQKSNFSFLLSYAKNEKYKLYFSAFLSICSSILMVVPYILIYNIILELLKADLDYNRIK KLAIYTAILIVVRLILFILSGVFSHVAAFSILYNIRMQAVKHLGNINLGYFREKNIGEIK KAINEDVEKLENFLAHQIPDLAGAITTPIVILVFLFFLEWRIAIFLIIPIILAILTQFAM FKGYGKRLDNYNYLLQRLTSTITQYIKGMNVFKAFNLTAHSFKKYIDVNNEYTENWHEMT DDYRAPYGIFLAVVDSALIFVIPSGGYLYLTNKINISTFLIFLLLSYTFLSSFKILMQFA GTFSFVLAGANNVRSIIEFPIQNDGKNLKNINFKEDILFSNVTFSYDKNDVLKNINLILK ANTITALVGPSGSGKTTIAYLLGRFWDIQKGSIKIGDIDIKDIDINYLLSNISYVFQDIF ILTDTIFENIKMGLDKTKEEVYQAAKDAEIHEFIMSLPNGYDTIIGDGYIKLSGGEKQRI SIARCLLKNSPIVILDEITAYSDIENEAKIQSAIRNLLKDKTAIIIAHRLYTIKDVDNII VLNEGKIVESGKHQDLITKENGLYKHLWEVK >gi|292606551|gb|ADGG01000059.1| GENE 22 19376 - 21100 2039 574 aa, chain + ## HITS:1 COG:FN0615 KEGG:ns NR:ns ## COG: FN0615 COG1132 # Protein_GI_number: 19703950 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Fusobacterium nucleatum # 1 574 1 574 574 962 96.0 0 MLNNLKILLDKDYTPVKKATCYQLLDILFNMIIYTILFLTIYSLIEKSFTMDKIYWYSGL LLIALIFKSYFGGWAMVKMQKTGSTASKDLRIAMGDHVKKLNLGYFNSHNLGYLINILTM DITDFEQAVTHNIPDLLKVFVLSIYLLLITFFINFKLAIIQIIVVLLTIPILKIGGEKLE KIGVEKKSVSAKLISTIIEYISGIEVFKSFGVIGDKFERLEKGFRDLKKYSIKLELVAVP YVLLFQVIIDLLFPILLLLAVRFFMNGELEAKMLVGFIVLSLTLTNVIRNFSVSYSVTRY LFVSVAKISDTLNYPTISYKDEDFNFSSYDISFEGVDFSYTEDRKVLKDINFTAKNNEIT ALVGKSGSGKSTVMSLIARFWDTTKGSIKIGGKDIKEVNPDSLLKNISMVFQDVYLINDT IYENIRIGNLNASEKEIMNAAKIANCHDFISKLPKGYDTYIGEEGSTLSGGEKQRISIAR ALLKNSPIILLDEATASLDADSEHEIKMAINELIKDKTVIIIAHRLNTIKDANKIIVMDD GKIIESGNHEKLMNDRGTYYSMFTAMEKAKEFSI >gi|292606551|gb|ADGG01000059.1| GENE 23 21178 - 21480 395 100 aa, chain - ## HITS:1 COG:no KEGG:FN0905 NR:ns ## KEGG: FN0905 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 100 1 101 101 132 77.0 3e-30 MFIAILLINACTNTTVPFNEVESSLNQKYISLSNEYYRMLENPIVERDRRAILSKFESFR TEVRGIKKTRKNPTSNELRVLNSFIDKASINIQYLNDLAE >gi|292606551|gb|ADGG01000059.1| GENE 24 21523 - 22530 1382 335 aa, chain - ## HITS:1 COG:FN0906 KEGG:ns NR:ns ## COG: FN0906 COG0240 # Protein_GI_number: 19704241 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 335 1 335 335 584 92.0 1e-167 MAKISVIGSGGWGIALTILLHKNGHELTVWSFDKKEAEELKITRENKAKLANILLPEDIV VTDDLKEAVTDKDILVLSVPSKAVRSVSKSLKDIVKEKQIIVNVAKGLEEDTLATMTDII EEELKDKNPQVAVLSGPSHAEEVGKGIPTTCVVSAHNKELTLYLQNIFMNPAFRVYTSPD MLGVEVGGALKNVIALAAGIADGLNYGDNTKAALITRGIKEIASLGVAMGGEQSTFYGLT GLGDLIVTCASMHSRNRRAGILLGQGKTLDEAIKEVNMVVEGVYSAKSALMAARKYNVEI PIIEQVNAVLFENKNAAEAVNELMIRDKKLEIQSW >gi|292606551|gb|ADGG01000059.1| GENE 25 22546 - 22848 244 100 aa, chain - ## HITS:1 COG:FN0907 KEGG:ns NR:ns ## COG: FN0907 COG4123 # Protein_GI_number: 19704242 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 1 100 123 223 223 140 79.0 5e-34 MEDNGKKINENEHRALSRHEIKLNLDEFIQNAKRLLKPIGTLYFVHRTHRLVEIIKTLDK NKFSVKKIIFVFSKNNTSSMMIIEALKGKKIKLEIENYYV >gi|292606551|gb|ADGG01000059.1| GENE 26 23118 - 23282 212 54 aa, chain - ## HITS:1 COG:TM1044 KEGG:ns NR:ns ## COG: TM1044 COG0675 # Protein_GI_number: 15643802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermotoga maritima # 1 49 328 376 405 83 69.0 9e-17 SSQICNCCGYRNEEVKDLSVRKWTCPVCGAVHNRDINAAKNILKEGLRILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 22:40:44 2011 Seq name: gi|292606550|gb|ADGG01000060.1| Fusobacterium sp. 1_1_41FAA cont1.60, whole genome shotgun sequence Length of sequence - 18956 bp Number of predicted genes - 29, with homology - 27 Number of transcription units - 7, operones - 4 average op.length - 6.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 261 - 488 251 ## COG4123 Predicted O-methyltransferase 2 1 Op 2 1/0.000 - CDS 490 - 1419 1091 ## COG1774 Uncharacterized homolog of PSP1 3 1 Op 3 1/0.000 - CDS 1433 - 2143 783 ## COG2003 DNA repair proteins 4 1 Op 4 2/0.000 - CDS 2159 - 3220 1361 ## COG2038 NaMN:DMB phosphoribosyltransferase 5 1 Op 5 6/0.000 - CDS 3235 - 3810 502 ## COG0406 Fructose-2,6-bisphosphatase 6 1 Op 6 8/0.000 - CDS 3820 - 4644 800 ## COG0368 Cobalamin-5-phosphate synthase 7 1 Op 7 . - CDS 4656 - 5219 651 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase - Prom 5241 - 5300 6.6 - Term 5264 - 5303 6.1 8 2 Tu 1 . - CDS 5319 - 5693 379 ## gi|294783995|ref|ZP_06749317.1| GTP-binding protein EngA - Prom 5768 - 5827 2.9 9 3 Op 1 . - CDS 5836 - 6189 501 ## gi|294783996|ref|ZP_06749318.1| hypothetical protein HMPREF0400_01994 10 3 Op 2 . - CDS 6189 - 6536 364 ## gi|237738991|ref|ZP_04569472.1| predicted protein 11 3 Op 3 . - CDS 6533 - 8242 2120 ## COG3210 Large exoproteins involved in heme utilization or adhesion 12 3 Op 4 . - CDS 8242 - 8772 575 ## Lebu_0388 hypothetical protein 13 3 Op 5 . - CDS 8786 - 9325 702 ## Sterm_3594 hypothetical protein - Prom 9402 - 9461 3.6 14 4 Tu 1 . + CDS 9478 - 9720 86 ## 15 5 Op 1 . - CDS 9849 - 10118 349 ## Lebu_2111 hypothetical protein 16 5 Op 2 . - CDS 10165 - 10398 360 ## Lebu_2110 hypothetical protein 17 5 Op 3 . - CDS 10455 - 10961 555 ## FN1599 hypothetical protein 18 5 Op 4 . - CDS 10958 - 11593 642 ## FN1721 hypothetical protein 19 5 Op 5 . - CDS 11635 - 12180 283 ## gi|262066000|ref|ZP_06025612.1| conserved hypothetical protein 20 5 Op 6 . - CDS 12146 - 12616 452 ## gi|294784006|ref|ZP_06749328.1| conserved hypothetical protein 21 5 Op 7 . - CDS 12640 - 12912 166 ## gi|294784007|ref|ZP_06749329.1| conserved hypothetical protein 22 5 Op 8 . - CDS 12913 - 13824 620 ## FN0289 hypothetical protein 23 5 Op 9 . - CDS 13805 - 14365 313 ## gi|294784009|ref|ZP_06749331.1| organic solvent tolerance protein 24 5 Op 10 . - CDS 14443 - 14934 225 ## gi|294784010|ref|ZP_06749332.1| conserved hypothetical protein 25 5 Op 11 . - CDS 15008 - 15181 139 ## - Prom 15216 - 15275 9.8 - Term 15791 - 15840 10.1 26 6 Op 1 6/0.000 - CDS 15862 - 17412 2218 ## COG3051 Citrate lyase, alpha subunit 27 6 Op 2 6/0.000 - CDS 17415 - 18305 1455 ## COG2301 Citrate lyase beta subunit 28 6 Op 3 . - CDS 18314 - 18598 491 ## COG3052 Citrate lyase, gamma subunit - Prom 18631 - 18690 1.6 29 7 Tu 1 . - CDS 18744 - 18956 138 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606550|gb|ADGG01000060.1| GENE 1 261 - 488 251 75 aa, chain - ## HITS:1 COG:FN0907 KEGG:ns NR:ns ## COG: FN0907 COG4123 # Protein_GI_number: 19704242 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 1 75 1 75 223 99 74.0 1e-21 MLKDDEIIEELDKKYKIIQKKGGYKYAEDTILLFNYLKKSLSKRNIKLLDIGTGNGILPI LLSDNAMIEEIVGID >gi|292606550|gb|ADGG01000060.1| GENE 2 490 - 1419 1091 309 aa, chain - ## HITS:1 COG:FN0908 KEGG:ns NR:ns ## COG: FN0908 COG1774 # Protein_GI_number: 19704243 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Fusobacterium nucleatum # 1 309 1 312 312 523 89.0 1e-148 MENNIIDENTQIVSTDPERIHKVLIVTFETTKKRYYFEVLGDETYKKNDKVIVETIRGTE LGIASNSPLPMKEKDLVLPIKPVLKLASEKEIEIYNKQRKEADEAFIACKEKIRKHQLEM KLITCEYTFDKSKLIFYFTANGRIDFRELVKDLAVMFKTRIELRQIGVRDEARILGNIGP CGKELCCKTFINKFDSVSVKMARDQGLVINPTKISGVCGRLLCCINYEYSQYEEALNNFP AVNQSVKTEIGEGKVVSISPLNNFLYVDVKDKGISRFSIDDIKFNRKEASILKNMKTKEE IENKILEKE >gi|292606550|gb|ADGG01000060.1| GENE 3 1433 - 2143 783 236 aa, chain - ## HITS:1 COG:FN0909 KEGG:ns NR:ns ## COG: FN0909 COG2003 # Protein_GI_number: 19704244 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Fusobacterium nucleatum # 6 236 2 232 232 302 70.0 4e-82 MAKEKTKNDAEGHRERVRKKFLENGFNGLEDYEVLELLLFYVIPRQDTKAIAKELIKRFK TLANVLKADTLELKNIDGLGPISITFLKMIGDLPARIYKDELKNQKLIKDDKNKITDKEV LLSFLRNKIGYEDVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKS IIIAHNHPSGNTCPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI >gi|292606550|gb|ADGG01000060.1| GENE 4 2159 - 3220 1361 353 aa, chain - ## HITS:1 COG:FN0910 KEGG:ns NR:ns ## COG: FN0910 COG2038 # Protein_GI_number: 19704245 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 352 1 352 354 601 84.0 1e-172 MKDINFLFDLINKIEPVDSSAIKEAQTELDRKMKPKDCLGVLEEICKKVASIYGYPIKQL DRKCHILVSADNGVIEEGVSSCPIEYTPIVSEAMLNNIACIGIFTKTLGVDLNVVDIGMK NDIKREYPNLIHRKVKRGTNNFYKEKAMSMEECLQAIFTGIDLINERANDYDIFSNGEMG IANTTTSSALLYSVTRENIDIVVGRGGGLSDEGLNKKKKIIVEACERYGTFDMNPIEMMA AVGGFDLACMLGMYIGAALNKKLMLVDGFISSVAALLACKLNKNIQDYLLFTHKSEEPGV NIILDYLKEKTFLNMNMRLGEGTGAVLAYPIIACAIEMINTMKSPEEVYKLFF >gi|292606550|gb|ADGG01000060.1| GENE 5 3235 - 3810 502 191 aa, chain - ## HITS:1 COG:FN0911 KEGG:ns NR:ns ## COG: FN0911 COG0406 # Protein_GI_number: 19704246 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Fusobacterium nucleatum # 1 190 1 190 191 303 80.0 1e-82 MGKLILIRHGQTEMNAQNLYFGKLNPPLNDLGIEQAYMAKEKLSNIAYDCIYSSPLERTK ETAEICNYLDKEIIYDSRLEEINFGIFEGLTFKEISEQYPNEVKEMEKNWKSFNYITGES LEELYQRAVSFLETLDYTKDNLIISHWGIINCIISYFVSGTLDTYWKFKVDNCSIVIFEG DFNFSYLTKLY >gi|292606550|gb|ADGG01000060.1| GENE 6 3820 - 4644 800 274 aa, chain - ## HITS:1 COG:FN0912 KEGG:ns NR:ns ## COG: FN0912 COG0368 # Protein_GI_number: 19704247 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Fusobacterium nucleatum # 1 274 1 277 278 333 71.0 2e-91 MKGFLLLLSFMTRIPMPKIDYDEEKLGKSMKLFPLVGIVIGFILLFFSIVFSYILSNLSF SAFLPIIILVVILTDLISTGALHLDGLADTFDGIFSYRSKHKMLEIMKDSRLGSNGALAL ILYFLIKFVLLYSLLMEDQGETVFAVLTYPVVARLCSVISCASAPYARGSGMGKTFVDNT KASGVIIASLITVVYSSAMLYHITFPHALPSDLVIRKLGVNLLIIAILGLFAYAFSKLIE RKIGGITGDTLGALLEISSLVYLFLIIVVPTFFL >gi|292606550|gb|ADGG01000060.1| GENE 7 4656 - 5219 651 187 aa, chain - ## HITS:1 COG:FN0913 KEGG:ns NR:ns ## COG: FN0913 COG2087 # Protein_GI_number: 19704248 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Fusobacterium nucleatum # 1 187 1 187 187 315 83.0 3e-86 MGKIIFFTGGSRSGKSKFAEEYIYEQKYKNKIYFATAIAFDDEMQDRIERHIKRRGNTWK TIEGFKNLISLVKNDVDSTDVILFDCITNFVSNFMIMDRDIDWDKVDLSVVQEIEDQIEE EMSNFLEFIRSKKTDCVFVTNEIGSGLVPDYPLGRHFRDICGRINQLVAKNSDEAYLAVS GIKVKIK >gi|292606550|gb|ADGG01000060.1| GENE 8 5319 - 5693 379 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783995|ref|ZP_06749317.1| ## NR: gi|294783995|ref|ZP_06749317.1| GTP-binding protein EngA [Fusobacterium sp. 1_1_41FAA] # 1 124 1 124 124 152 100.0 6e-36 MLIDCNRCEKYKYIIEELFIKEDEIIIFHINKKERIEKHKIKFDEITDLEYKDPFFLNPY KPDTFFYKNIEKCRLLKIKLKSKKVISFGFFLEEEEAKKIIKAIKERKINYEKVQEEIKE FQNK >gi|292606550|gb|ADGG01000060.1| GENE 9 5836 - 6189 501 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294783996|ref|ZP_06749318.1| ## NR: gi|294783996|ref|ZP_06749318.1| hypothetical protein HMPREF0400_01994 [Fusobacterium sp. 1_1_41FAA] # 1 117 1 117 117 198 100.0 7e-50 MREKSDVEDLFDVSESIIGITLEDIREQFQLWMEGKITRTEVEYWSDRRNTCFHHYDDVE FYPIEKEDLYQKWIEILSMFVLGGEGDYFYTDEGLKRMYYELCEDIKKADEKFEQEN >gi|292606550|gb|ADGG01000060.1| GENE 10 6189 - 6536 364 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237738991|ref|ZP_04569472.1| ## NR: gi|237738991|ref|ZP_04569472.1| predicted protein [Fusobacterium sp. 2_1_31] # 1 113 1 113 238 185 99.0 6e-46 MIYRISLEDIREQIEDVLILDKWKMTKNEEQIKYLTEKRHYRKGKTREEVHEWAKPRYET LIDKVSKDKVVFYPERDFILIRNWLKFLYYAINIRFEDGSYDYKYEVLNFYLKNY >gi|292606550|gb|ADGG01000060.1| GENE 11 6533 - 8242 2120 569 aa, chain - ## HITS:1 COG:FN0290 KEGG:ns NR:ns ## COG: FN0290 COG3210 # Protein_GI_number: 19703635 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Fusobacterium nucleatum # 1 136 412 547 727 197 82.0 5e-50 MNKLLNNALRAKGYAGPDIKMVLTDVTDPNGPYYTDTLTNVVVFDRKVLASLDRDKILNI LGHEFGHYSKEDNKTGNQTIANYTGDKLEDRTKAMVAKEATEDTLASIRNNPNVITGDEG KKLAESIPMDRREYVKWGRVLKGVGVGGFGLIRMVFAYGEINLGGPIGWGHGGAQGFFGL SETIEGLDHIRLGFKDIDEDEKPAFSLSKTILGDSEEFTNMGVAMTTEHAIVYAKAFSSV PSMLKMLGNKSSSYVKLEQGVSKVSKNGIDVVAEDLTAVKVGSSNNKNTVTQIGKNSKEV VLYEDKNSKITVDVKDVFIEDTGTTKSTNINQQVNKGTTSNNQKGEGVSKISITKDKSGT NQIVADNSQKSVYKNGQKIKGDFKISEDKRTIKDSTNGKIYKLYGKTKDGRDVYEHNGSI YKYNTKGLQKISSKNVEEVYSKDYNEAGNTTPDSEITVSSYEKLEKGYSNGKYVDKKKLT NGKIRYYEKAKPANNPAEHKKETRLVIEYNPETDQKRAWLETIDSDNKVRMVRPEKNNNT KTHYEFDKNGKYIGTKEEREMRNSKKEEK >gi|292606550|gb|ADGG01000060.1| GENE 12 8242 - 8772 575 176 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0388 NR:ns ## KEGG: Lebu_0388 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 2 170 5 178 188 90 40.0 2e-17 MKFILNKTSGINGIEKVSLEKIIQTFSVPENIEINIDKSNILDIGLKYEDINLAIFYVIN FINSEITKNYITAHFVIKKLYLDENIFIEENEKINKILPKIIKYLKNNNKSTEYNIERRR KSGIYYFDNEGIAIFYQKEFNKKIVEKIDISLPYEDNLNISDIGKILNIEILKQIL >gi|292606550|gb|ADGG01000060.1| GENE 13 8786 - 9325 702 179 aa, chain - ## HITS:1 COG:no KEGG:Sterm_3594 NR:ns ## KEGG: Sterm_3594 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 170 1 171 171 121 42.0 1e-26 MEFILNKTLGINGIDRISFKKIIEILGRASRIKLELGKDNFDLNITLEYKQLELIINYCV NFYLGTRIPEFQRLFFVVEKLYLDNEVIKIGEDVRKVFTKVKRYTKNNYKIFNYEYNIGE YSGSYDFNNLDLTIYFEKYGKKRIVDGIYVSLPYEDNPNISNIGEILKLDILKNIFEYK >gi|292606550|gb|ADGG01000060.1| GENE 14 9478 - 9720 86 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSFLFCMKLYFCCTFTPLSRTIPTGFPVSIKIFISPHFASTISPLSSAGKVYSTILFNI LSVKFSYKCNCTPIIYTIII >gi|292606550|gb|ADGG01000060.1| GENE 15 9849 - 10118 349 89 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2111 NR:ns ## KEGG: Lebu_2111 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 75 1 78 154 66 53.0 3e-10 MKIYVLSHEYCYGDYKYKYKEESRFVGIYLTRKEALKALEKFKKIRGFSSHLDGFYIVKT EINQIGWVDGYRTGYFSMELGMHEEKEEE >gi|292606550|gb|ADGG01000060.1| GENE 16 10165 - 10398 360 77 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2110 NR:ns ## KEGG: Lebu_2110 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 2 71 5 74 77 73 64.0 2e-12 MESKIKKVYMLYHINERKDEKLIGFLSSKEKAESIIKELVEKPGFKDCPNGFRIKTMIIG KDYYTKGFKSKCTPKDE >gi|292606550|gb|ADGG01000060.1| GENE 17 10455 - 10961 555 168 aa, chain - ## HITS:1 COG:no KEGG:FN1599 NR:ns ## KEGG: FN1599 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 168 1 168 168 255 83.0 4e-67 MITLDDFKNNNLKINWKVIHIGCLGSEVFKNELSYDDIINFSLEEFDEKNKLILRIVGSD RDEYQEIASLVQELANIEESEYKLAFEKWKLVYIKKNFPQLNKNIIQGLIELNDLWVKLD FPEDSPCILQGVKNNISPQEYYTEENYIYLYNRHLDWIRDKSNYLNGK >gi|292606550|gb|ADGG01000060.1| GENE 18 10958 - 11593 642 211 aa, chain - ## HITS:1 COG:no KEGG:FN1721 NR:ns ## KEGG: FN1721 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 93 1 91 94 78 51.0 2e-13 MLSSNEKLIEFGNEIKEIINLWDPMELMDFCPEDEYETEVKGIRNLVVNNKNIDKKSLAQ EIRNIFKYYFSNEYKSKKDIEENVASKIIEKSKKYKLNFILPNYYDTKKIIFKNQKEADI YINLYIKINKIINLWDPLKIMDISFSNEYSYETNRIIEELSKNISAQDLAKKINKIFKNS YNELYEIEKNEEIKIARKILKAYNIEEGRGI >gi|292606550|gb|ADGG01000060.1| GENE 19 11635 - 12180 283 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262066000|ref|ZP_06025612.1| ## NR: gi|262066000|ref|ZP_06025612.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC 33693] # 1 181 1 181 181 233 91.0 4e-60 MKKYIINFSEDSNKTIVTRYLKENFLMKSKFFILLYSIYLIYVGVHIYKFNLDISLMKKV SLETSFHFLVLYFIILLVKSKEIMILEKEEITIKKFFTFICYQTNKIKVNDVKSIYYEVN SLTRKFNIFVDMTKNLKIRTKFKEFEDKIYYFGINLSEEDYREIIAKILEYNEALNILQV E >gi|292606550|gb|ADGG01000060.1| GENE 20 12146 - 12616 452 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294784006|ref|ZP_06749328.1| ## NR: gi|294784006|ref|ZP_06749328.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 156 1 156 156 217 100.0 1e-55 MITITEKDNKIYIIQDSGEYEKSLATEILLLLLVTLTMRLVYLDSYETNGFLYLFIFFFF KDIVILRKKIQIILDLNERNIITKKETFNFKNIGKIDTKKIGYVPVSYGVEIYYDKKPKL LFSTCLENEAIEIIKTLKMFIKGEEDEKIYNKFFRR >gi|292606550|gb|ADGG01000060.1| GENE 21 12640 - 12912 166 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294784007|ref|ZP_06749329.1| ## NR: gi|294784007|ref|ZP_06749329.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 90 1 90 90 146 100.0 4e-34 MKKVRNDSQPFISYIIPIFVLPFVASFVGLVFYGILSSFNKINFGSIYGILLSVIFFYVI IRGMKNAILYFIPREECYVEDENLIYRRTK >gi|292606550|gb|ADGG01000060.1| GENE 22 12913 - 13824 620 303 aa, chain - ## HITS:1 COG:no KEGG:FN0289 NR:ns ## KEGG: FN0289 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 169 297 178 306 308 165 75.0 2e-39 MEIRITKTENYLKIEKIAKKELLIRIIIFLLIVFYFFITTYKKYGRITIFLTLLIFPVGI SFYLAFISNYPYEVLIIKNGKMIRYVSLFYRHLKFCKLFNFLQVYDIDNLKHIYFKNTTE ILVIKAIKRTESPYHKIHLTFKDKSYTAFGMKLKDEVAKDIVLTINKFLEKYIKENKIKR LTLAEKENLSEKYNYPLDERYNYILNKILDEEKLFISEKDNNFIINGDSEAVKDLEIFKN MDFEEIDFYVFYVNYLSKKEYENKEVLVGYNGIDGKEVTMSKFKEDINEIGDSRSIYGRE VEK >gi|292606550|gb|ADGG01000060.1| GENE 23 13805 - 14365 313 186 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294784009|ref|ZP_06749331.1| ## NR: gi|294784009|ref|ZP_06749331.1| organic solvent tolerance protein [Fusobacterium sp. 1_1_41FAA] # 1 186 1 186 186 283 100.0 3e-75 MKIKVIKREKYLRIEKILKKEFIIRTIIFFLIALYFFINSFIKYGILTVGMSIFCFPVIF LFYLRFILKCSYEILIIKKDIISSYISKNYYISKSKFKNLNKKFEISNLEKIYFKEYPIW AIVRGVKYEENPYFKLHFKLKDGEQFDFGLMLDDNEAKEILKEIKEFLNINKLTQEVIEQ YGDKNN >gi|292606550|gb|ADGG01000060.1| GENE 24 14443 - 14934 225 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294784010|ref|ZP_06749332.1| ## NR: gi|294784010|ref|ZP_06749332.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 11 163 1 153 153 169 99.0 5e-41 MSILNLRRHIVNSFSGNFMYNLKYFLTLITTVNVSISDFFLIYYIIFSFCIVNFLQIKLC KKLYNEVKIEIIFLPKLTYLIPGIYRIHMYILGIFILIILKIKYKKNIKEVFFFFLIYYE TLLVNAVVVLIELIYYLFNQELFIDTINENFELYKNMPLEFYF >gi|292606550|gb|ADGG01000060.1| GENE 25 15008 - 15181 139 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYLVLFIIGVVLNISLVIREKNIDIKEIILGIIIFSTVPLIITFGIIYLILLNFIYE >gi|292606550|gb|ADGG01000060.1| GENE 26 15862 - 17412 2218 516 aa, chain - ## HITS:1 COG:FN1380 KEGG:ns NR:ns ## COG: FN1380 COG3051 # Protein_GI_number: 19704715 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Fusobacterium nucleatum # 1 516 1 516 516 951 97.0 0 MKFNKNAVGREIPEYLEGIGELVPFKGVDAIKPTKSKAGAKLRMRIQDEKKLVASIEEAI KKSGLKDGMSISFHHHMRNGDTVVNRVLDIISKMGIKDITLAPSSLSSCHGPVIDHIKSG VVTGIQSSGLREPLGDEISKGILKKPVIIRSHGGRARAVEDGELHIDVAFIAAPSCDEMG NMNGRIGKSACGSMGYAIVDAQYADYVIAITDNLVPFPNLPASIDQTLVDTVVVVDSIGD PKKIVSGAIRDSDNPRDLLIAKNAVDVIVNSGYFKDGFVYQTGTGGASLSVTKLLKEEMI KQNIKASLGLGGITSQLVSLHEEGLMEALFDTQSFDLDAVRSIAENPKHYEISASFYANP NTPGPAVNNLTFVMLSALEIDKDFNVNVMTKSDGTINQAVGGHQDTAAGARISVILAPLM RARIPIIVDKVTTVCTPGEAVDVICTDYGIVVNPRRKDLIETLTKAGVELKTIEEMKEMA EQLTGKPDPVEFTDEIVGVVQYRDGSIIDVIKKVKE >gi|292606550|gb|ADGG01000060.1| GENE 27 17415 - 18305 1455 296 aa, chain - ## HITS:1 COG:FN1379 KEGG:ns NR:ns ## COG: FN1379 COG2301 # Protein_GI_number: 19704714 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Fusobacterium nucleatum # 1 296 1 296 296 535 92.0 1e-152 MAIRDRLRRTMMFLPGNNPSMITDAHIYKPDSIMIDLEDAVSVNQKDAARFLVSEALKAI DYKTTERVVRVNGLDTPFGADDIRAIVKAGVDVIRLPKTDNPDEIVAVDKLITEVEREIG KEGETLLMAAIESAAGIMNVKEIALASKRLMGIALGAEDYVTNLKTSRSKHGWELYYARE AIVLAARNAGIYCFDTVYSDVNNIEGFRNEVQFIKDLGFDGKSCIHPKQVRIVHEIYTPS QKEIEKSIRIINGAKEAEAKGSGVISVDGKMVDNPIIMRAQRVLDLAKASGIYKED >gi|292606550|gb|ADGG01000060.1| GENE 28 18314 - 18598 491 94 aa, chain - ## HITS:1 COG:FN1378 KEGG:ns NR:ns ## COG: FN1378 COG3052 # Protein_GI_number: 19704713 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Fusobacterium nucleatum # 1 94 1 94 94 146 92.0 9e-36 MVLKTVGIAGTLESSDAMITVEPANEGGIVIDVSSSVKRQFGRQITETVLNTIKELGVEN ASVKVVDKGALNYALIARTKAAVYRAAESKEYKF >gi|292606550|gb|ADGG01000060.1| GENE 29 18744 - 18956 138 70 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 2 69 348 415 416 104 77.0 9e-22 EIPIYDKENPQEYIFSGKRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRGE LNTPKRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 22:42:20 2011 Seq name: gi|292606549|gb|ADGG01000061.1| Fusobacterium sp. 1_1_41FAA cont1.61, whole genome shotgun sequence Length of sequence - 35005 bp Number of predicted genes - 36, with homology - 36 Number of transcription units - 11, operones - 7 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 59 - 202 92 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 2 1 Op 2 1/0.000 - CDS 245 - 1075 751 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 3 1 Op 3 1/0.000 - CDS 1062 - 2408 2013 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase - Prom 2441 - 2500 4.8 - Term 2441 - 2479 4.7 4 1 Op 4 . - CDS 2503 - 3867 1842 ## COG3493 Na+/citrate symporter - Prom 3999 - 4058 9.8 + Prom 3835 - 3894 9.1 5 2 Op 1 . + CDS 4091 - 4561 623 ## COG2606 Uncharacterized conserved protein 6 2 Op 2 1/0.000 + CDS 4631 - 6730 1715 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase 7 2 Op 3 1/0.000 + CDS 6752 - 7315 303 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 8 2 Op 4 1/0.000 + CDS 7329 - 7607 255 ## COG0762 Predicted integral membrane protein + Term 7618 - 7659 7.3 9 2 Op 5 . + CDS 7686 - 8630 1338 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 10 2 Op 6 . + CDS 8632 - 8889 427 ## FN1712 hypothetical protein 11 2 Op 7 . + CDS 8891 - 10249 1563 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 10253 - 10312 4.6 12 3 Tu 1 . + CDS 10362 - 11333 1225 ## Slin_3087 hypothetical protein + Term 11367 - 11398 -0.5 + Prom 11389 - 11448 10.8 13 4 Tu 1 . + CDS 11498 - 15235 2619 ## OB3378 hypothetical protein + Term 15255 - 15293 1.3 + Prom 15298 - 15357 6.5 14 5 Op 1 . + CDS 15381 - 15821 538 ## COG1959 Predicted transcriptional regulator 15 5 Op 2 . + CDS 15811 - 16665 930 ## COG0778 Nitroreductase + Prom 16679 - 16738 7.1 16 6 Op 1 . + CDS 16796 - 17368 593 ## FN1716 hypothetical protein 17 6 Op 2 . + CDS 17446 - 17826 601 ## gi|294784031|ref|ZP_06749353.1| hypothetical protein HMPREF0400_02029 + Term 17849 - 17894 3.5 + Prom 17868 - 17927 8.0 18 7 Op 1 1/0.000 + CDS 17956 - 18744 981 ## COG0253 Diaminopimelate epimerase 19 7 Op 2 35/0.000 + CDS 18748 - 19359 540 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 20 7 Op 3 9/0.000 + CDS 19343 - 20686 1450 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 21 7 Op 4 . + CDS 20680 - 21414 608 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 21532 - 21590 -0.9 + Prom 21676 - 21735 13.6 22 8 Op 1 1/0.000 + CDS 21862 - 23289 1996 ## COG0277 FAD/FMN-containing dehydrogenases 23 8 Op 2 2/0.000 + CDS 23329 - 24465 1681 ## COG1960 Acyl-CoA dehydrogenases 24 8 Op 3 29/0.000 + CDS 24475 - 25254 1250 ## COG2086 Electron transfer flavoprotein, beta subunit 25 8 Op 4 1/0.000 + CDS 25266 - 26234 1445 ## COG2025 Electron transfer flavoprotein, alpha subunit 26 8 Op 5 23/0.000 + CDS 26302 - 26685 495 ## COG1380 Putative effector of murein hydrolase LrgA 27 8 Op 6 . + CDS 26678 - 27388 776 ## COG1346 Putative effector of murein hydrolase + Term 27403 - 27459 4.4 28 9 Tu 1 . - CDS 27554 - 27718 69 ## gi|237738943|ref|ZP_04569424.1| predicted protein - Prom 27838 - 27897 11.1 + Prom 27762 - 27821 14.6 29 10 Tu 1 . + CDS 27918 - 28577 1111 ## COG2932 Predicted transcriptional regulator + Term 28588 - 28628 2.0 - Term 28618 - 28671 7.4 30 11 Op 1 12/0.000 - CDS 28687 - 29937 2007 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 31 11 Op 2 3/0.000 - CDS 29962 - 30546 913 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 32 11 Op 3 13/0.000 - CDS 30543 - 31160 911 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 33 11 Op 4 12/0.000 - CDS 31160 - 31693 857 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 34 11 Op 5 12/0.000 - CDS 31683 - 32627 1136 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 35 11 Op 6 1/0.000 - CDS 32654 - 33961 2150 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 36 11 Op 7 . - CDS 34037 - 34612 1005 ## COG0193 Peptidyl-tRNA hydrolase - Prom 34640 - 34699 6.6 - 5S_RRNA 34785 - 34900 100.0 # AE009951 [D:1076861..1076976] # 5S Ribosomal RNA # Fusobacterium nucleatum subsp. nucleatum ATCC 25586 # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Predicted protein(s) >gi|292606549|gb|ADGG01000061.1| GENE 1 59 - 202 92 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 1 47 43 89 89 83 89.0 5e-15 MKHVLVGYELHEDFSKHIGKLVCRHGAKLCNKETELLGTLKASITTT >gi|292606549|gb|ADGG01000061.1| GENE 2 245 - 1075 751 276 aa, chain - ## HITS:1 COG:FN1377 KEGG:ns NR:ns ## COG: FN1377 COG1767 # Protein_GI_number: 19704712 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Fusobacterium nucleatum # 1 275 1 275 279 384 74.0 1e-107 MKMNNKNIATLATKALLYEVSISPKAGLVSRLSNGSHKDMNFYIFIDSSLALHNYFLNCF DYGQENLFSCPDFFKNLRELGKVAEKGMYEATKGINTHKGTIFSMGILLAVLGVHLKENK KIDLKVLSEKIKEMCKPLLNELEDADSISTYGEKAYKEYHFTGARGLAISGYEIVLLDGI NKLKDFCKTLDFETACILLLFYYMSVLDDTNIVNRASITTLKEVQILSKELFEQHRKTLV KENIKNSMSKLNDIFIEKNISAGGSADLLILTIFIK >gi|292606549|gb|ADGG01000061.1| GENE 3 1062 - 2408 2013 448 aa, chain - ## HITS:1 COG:FN1376 KEGG:ns NR:ns ## COG: FN1376 COG5016 # Protein_GI_number: 19704711 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Fusobacterium nucleatum # 1 448 1 448 448 834 93.0 0 MNKIKIMETCLRDGHQSLMATRMTTAEMLPIIEKLDSVGYHSLEMWGGATFDAALRFLNE DPWERLREIKKRAKNTKLQMLLRGQNLLGYRNYPDDIVEKFVQKSIENGIDIVRIFDALN DVRNLKTACEATKKYGGHAQLAMSYTISPVHTIEYYKNLALEMQEIGADSIAIKDMSGIL LPEVAYELVSVLKSVLRVPVEVHTHATAGLASMTYLRAIEAGADIVDTAISPLSGGTSQP ATESLVRTLQGTERETGFDLDLLKEIAEYFKPIRAKYLQEGILNPQALMTEPSIVEYQLP GGMLSNFLSQLKMQKAEHKYEDVLREIPRVRADLGYPPLVTPLSQMVGTQAIFNILTGQR YKLIPNEIKNYVRGLYGKSPVPISDEIKNTIIGAEEVFTGRPADKLAPEYDKLKEESREF ARSVEDVLSYALFPQVAKDFLTKKYENE >gi|292606549|gb|ADGG01000061.1| GENE 4 2503 - 3867 1842 454 aa, chain - ## HITS:1 COG:FN1375 KEGG:ns NR:ns ## COG: FN1375 COG3493 # Protein_GI_number: 19704710 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Fusobacterium nucleatum # 1 454 1 454 454 756 91.0 0 MAKKNFKELFDPKESKWGGISLPMFLAALVVVAIVVYVPFGLDKEGNPGSFLRPNFLIMF SALAVFGLLFGEIGDRIPIWNDFVGGGTILVFFMAAVFGTYHLVPENFMKAVNIFYGKQP VNFLEMFIPALIVGSVLTVDRKTLIKSISGYIPLIIIGVIGASAGGILVGLIFGKSPLDV MMNYVLPIMGGGTGAGAVPMSEMWAAKTGRPASEWFGFAISILSIANIYAILCGALLKKV GEAKPNLTGNGELIIDNSKEAIRDKEVEVKPELTDTTAAFILTGVLFMVAHILGEVWESL NIGFDLHRLVFLILLTMFLNIANVVPDKIKAGAKRMQTFFSKHTIWILMAAVGFTTDVKE IIAAGAPSNLLIALAIVLGAVGLIMLVARKMKFYPVEAAITAGLCMANRGGAGDVAVLGA ADRMDLMSFAQISSRIGGAMMLVLGSLMFSLFAS >gi|292606549|gb|ADGG01000061.1| GENE 5 4091 - 4561 623 156 aa, chain + ## HITS:1 COG:FN1373 KEGG:ns NR:ns ## COG: FN1373 COG2606 # Protein_GI_number: 19704708 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 156 1 156 162 234 83.0 5e-62 MKKTNAIRELETHKIEHIVREYEVDEDHLDALSVAIKTNEDITRIFKTLVLLNEKKEMIV ACIPGLEKLDLKKLAKLSGSKKVEMLPMKDLFSMTGYLRGGCSPIAIKKRHTTFIHNSAT DNETILISGGLRGLQIEISPQKLIDYLNLKVADIIE >gi|292606549|gb|ADGG01000061.1| GENE 6 4631 - 6730 1715 699 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 1 699 1 694 714 665 51 0.0 MFDEKIMELELAGRTLKVSTGKISRQSSGAIVIQYGDTVVLSTANRSKEARKGADFFPLT VDYVEKFYSTGKFPGGFNKREGRPSTNATLIARLIDRPIRPMFPDGFNYDVHIVNTVLSY DEVNTPDYLGIIGSSLALMISDIPFLGPVAGVTVGYKNGEFILNPSPAELEESELDLSVA GTKDAVNMVEAGAKELDEETMLKAIMFAHDNIKKICEFQEVFAKLYGKENIEFTKEEVLP LVKDFIDTNGHKRLQEAVLTTGKKNREEAVDSLEEELLNKFVEENYPDVPEEELPEDVIA EFKTYYHDLMKILVREAILYHKHRVDGRTTTEIRPLDAQINVLPIPHGSALFTRGETQSL AITTLGTKADEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLAERAL RYVIPSEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMGLIKE GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAHEARI QILEVMNNTISKPAELKSNVPRIQQITIPKDKIAVLIGPGGKNIKGIIEQTGATVDITDD GLVSVFAKDAEVLEKTLKLIDSFVREVEYNEVYEGRVVSIMKFGAFMEILPGKEGLLHIS EISPERVEKVEDVLSVGDVFKVRVISMEGGKISLSKKKV >gi|292606549|gb|ADGG01000061.1| GENE 7 6752 - 7315 303 187 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 5 180 484 665 904 121 35 7e-27 MNLPNRLTMIRFILAIPFIIFLQESDSSKYGFIFRMIALVIFVIASLTDFFDGYIARKYN LITDFGKIMDPLADKILVISALVIFVQLEYIPGWMSIIVLAREFLISGIRILAAAKGEII AAGNLGKYKTTSQMLVVVIALAIGPIGFNLASHFFTIAEVLMLIPVILTIWSGWEYTFKA KHYFLEQ >gi|292606549|gb|ADGG01000061.1| GENE 8 7329 - 7607 255 92 aa, chain + ## HITS:1 COG:FN1710 KEGG:ns NR:ns ## COG: FN1710 COG0762 # Protein_GI_number: 19705031 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Fusobacterium nucleatum # 1 90 1 90 91 66 45.0 2e-11 MPLLTYSLITILNRMLLFVYILIMVRIFLPFLPIDDKYIDFIYDLTDPILKPFRDFFDKF VDLPVDFSPMLLILTLGVIQKILVKIIIALTW >gi|292606549|gb|ADGG01000061.1| GENE 9 7686 - 8630 1338 314 aa, chain + ## HITS:1 COG:FN1711 KEGG:ns NR:ns ## COG: FN1711 COG0275 # Protein_GI_number: 19705032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Fusobacterium nucleatum # 1 314 1 314 314 539 89.0 1e-153 MEKIGNDYHIPVLYYETLDNLVINPDGVYIDCTLGGGSHSEGILERLSDKGLLLSIDQDS NAIEYSKKRLEKYASKWKVLKGNFENIDTLAYMAGIDKVDGILMDIGVSSKQLDEAERGF SYRYDVKLDMRMNTEQKLSAYDVVNTYSEEELSRIIFEYGEERFARKIAKLICENRKIKP ITTTFELVALIRRAYPERASKHPAKKTFQAIRIEVNRELEVLENAMSKAVELLKVGGRLG IITFHSLEDRIVKNKFKDLATACKCPKDIPICMCGGVKKFEIITRKPIIPIEDELKNNNR AHSSKLRILERILD >gi|292606549|gb|ADGG01000061.1| GENE 10 8632 - 8889 427 85 aa, chain + ## HITS:1 COG:no KEGG:FN1712 NR:ns ## KEGG: FN1712 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 85 4 88 88 79 67.0 4e-14 MKYLALLTFIAVVFIWLFNIQTLREVTELEKQLKAANETLEELDKDLDKKIIYYDSKLDL DKIKRDMEAKGMKVTEEVVYFEIEE >gi|292606549|gb|ADGG01000061.1| GENE 11 8891 - 10249 1563 452 aa, chain + ## HITS:1 COG:FN1713 KEGG:ns NR:ns ## COG: FN1713 COG2265 # Protein_GI_number: 19705034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Fusobacterium nucleatum # 1 450 13 462 464 728 92.0 0 MLKVDDIIQIKIDKIVFGGEGLGYYNGFAVFVPMSIPEDELEIEIISVKKTYARGLIKNI IKASPERIDSHKFTFEDFYGCDFAMLKYESQLKYKKLMVEEVMRKIAGLPDIEISDVLAS EDVYNYRNKIIEPFSVYGNKIITGFFKRKSHEVFEVDENILNSKLGNRIIKELKEILNKN KISVYNEITHKGLLRNVMIRTNSNNEAMLVLIINSNKITENIKNLLFRLREKIEEIKSIY ISLNSKKTNTVIGDKNIFIYGEKSIKENLNGIEFHISPTSFFQINVKQAKRLYDIAINFF DNIDDKYIVDAYSGTGTIGMIMAKKAKKVYAIEIVKSASEDGEKTAKENGIENIEFINGS VEKELVNLINANKRIDTIIFDPPRKGLEASIIDKVAELNLKEVVYISCNPSTFARDVKLF SEKGYVLKKLQAVDMFPQTSHIECVGLIERCY >gi|292606549|gb|ADGG01000061.1| GENE 12 10362 - 11333 1225 323 aa, chain + ## HITS:1 COG:no KEGG:Slin_3087 NR:ns ## KEGG: Slin_3087 # Name: not_defined # Def: hypothetical protein # Organism: S.linguale # Pathway: not_defined # 1 323 1 322 329 233 40.0 1e-59 MSILKAYGNEVFSIFQLIGNKENDITKSIAWGLKKCPVFMAKFIYEIFKIDINPDEVSIF YQNYNPKAGITDIEMTDGKTFYLIIEAKRGWLLPGEEQLKKYSLRKNFREIKVDNKAILS MSECSIEYAKSNLPFENIDEIPVKHLSWSKIYNLAVASRVNSNNEQKHLLDELKEYLGGI MTMQTKDSNWVYVVVLSSGKPENCNLTWIEIVKDCGKYFHPVGGNGWPKDPPNYIAFRYD GKLQSIHHIDSYVVTKNLHKEITCMPDINEDINFFVYTLGPAIIPPKEIKTGNIYPNGRV WAMLDTLLTSDTISEARDISKTR >gi|292606549|gb|ADGG01000061.1| GENE 13 11498 - 15235 2619 1245 aa, chain + ## HITS:1 COG:no KEGG:OB3378 NR:ns ## KEGG: OB3378 # Name: not_defined # Def: hypothetical protein # Organism: O.iheyensis # Pathway: not_defined # 2 1245 4 1232 1232 434 28.0 1e-119 MIETIKQKILQLDAGSFQNLCDSYLSKIGYQDIVSLGGKAGTRKTTLGTPDTYFSTPDGK YVFVEYTTQTEGLFKKIKEDLDKCLDESETNISHNDILEIIYCHTSANLRPSQDKELKDF CQNIDIKLILIGIDKLAEDIYLFHHLLARDFLGISIDTGQILNFDDFVEEYNSNKLSAPI DTEFLFREKEIEEINKAFEKNNIVILNGVAGTGKTRLALHYAKNCVDSHNAKLYCITSKA LEIYEDLKLFLNTPGEYILVVDDANQLSARLEHIINYANMQSKGFNVKILITVRSYALQK VLNNIQARASYSVININLFTDDEIKKLLETSLNILNREYQEKIIRIAEGNSRIAFLAGKL AHQSKNLNSINDVSQLYDDYFGVYLNNEMDCNEELVICAGIVAFLEAFHLDYIDDNIFYI LKEKGINKEQFIENIKKLHEKEIVDIYDDKAIKFSEQCLSNYFLKYVFFNKKLLSLSSII NIGFQNYKERTISTVNILINIFASKELLDFVSNKIKIVWEKLKDENSPHFFDFVKIFFRI NPTETLIILKRKIEEEKGTIIDISNTDTLIEKNYKKIDNDIIEILSGFSGMKDFPTSLEL FFQYYLKCPNLYKNFYYAIDQYFKINRESLKNDFYTQINFFRKLEEFSNKWQEKNITLLF LEVVKNFLKFFFNSSENGRKIGTVEFYNFSLKISKSVQKYRKFIWESLLKIAKNSRYKNK IWYILYSYGTDRIEKDSLTILEFDLEYIKKLLNFNFPPNNLKNCILANNLLNVFYKIGYT KESLFTEYFNSDSFHLYSLLKGPDYRIEKDFEKIESIKKQSIEKYLVNASYVELKCLIDV CYECENINKQIEWEITDALRIIFDILTDKTYVSMVKYYIDKNTPLNLDPSKLVKKLFKLI SKNEIFNLINNSNLKCKNSWLYAYFSELPKNLIEKEDLQNMYTFLEDTSDKNITFSSYYC RDINFLEKYEFMDENVFIKCSEIILSKNTYSIFMVYLYFQSLFNLDNYSPKEVIIKFSNN LKILEKIYFTLLLFDENSFDYNGLILKELYLTRPAILNNLVEFLICRKKDYFNFPKKYQS FFELPDYIYIYNKFFQNLSSYESIFNILEIILLPSSKKIILKRQDDFIKYWITEFSNNEL KMECLFNALDKLNNDAKKEYINFFIKKNESFEDLKKIPLIPTFTDNLVSGSFIPLYSSWI EYLKSLLPIFVGYKWLEHKGHIEKQIDYFREKIKSEETKEFLRSF >gi|292606549|gb|ADGG01000061.1| GENE 14 15381 - 15821 538 146 aa, chain + ## HITS:1 COG:BS_ywnA KEGG:ns NR:ns ## COG: BS_ywnA COG1959 # Protein_GI_number: 16080716 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus subtilis # 1 133 2 133 133 88 36.0 5e-18 MDTKFSIALHVLAYIEETNNTVTSELLAKSVGTNASHIRKILALLKDADIIESQQGKKGI VLKIKANELSLDKIYFGVYPEKELLHVHDTANPDCPVGATIKEALLPIFEESERQLILSL KSKTLKSLIEDMYKIYNKKGKNKNEF >gi|292606549|gb|ADGG01000061.1| GENE 15 15811 - 16665 930 284 aa, chain + ## HITS:1 COG:CAC0748 KEGG:ns NR:ns ## COG: CAC0748 COG0778 # Protein_GI_number: 15894035 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 11 250 1 221 241 67 24.0 3e-11 MNFKEVNKLPIDVKETIKKRISTRSFLEKSLTNDDKNKLMNFYKTLTNPFGVNVRVQYIS KETGVENVQLGTYGTIKGAKNFLAITVKDEPFAMEAVGYQFENLVLYATDMGLGTVWLAA TFSRKDFENIMELSDDDLFPCISPIGYPAEKRSFVEKIMRASLGSKNRKAWNKLFYLNDF NQTLSQTDAGKYETALEMLRLAPSSTNAQPWIAVKEGDNIHFFCNYKDSISDDMKKIKHL DLGIGLAHFHQTAMSEGLDGKFEIRDIKFPIAENMHYVISYLVK >gi|292606549|gb|ADGG01000061.1| GENE 16 16796 - 17368 593 190 aa, chain + ## HITS:1 COG:no KEGG:FN1716 NR:ns ## KEGG: FN1716 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 190 1 189 189 281 74.0 9e-75 MKNFKIKLILLVSLVFFTACSSVQTTPKYEKKERVTWRKMEGSVIVLPLEAGDIIIKEKT ANPIGMFGHVAIMKNDRTVVDYPKFGNKSYTIDISYWLEKGRDILVLRYKDMDEEFKKRL VRNMEKYFGKNYKITTDRENIEGFYCSQYIWYVYYMTAKEMGYDLDLDSDGGSFVMPYDF INSPYLEIID >gi|292606549|gb|ADGG01000061.1| GENE 17 17446 - 17826 601 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294784031|ref|ZP_06749353.1| ## NR: gi|294784031|ref|ZP_06749353.1| hypothetical protein HMPREF0400_02029 [Fusobacterium sp. 1_1_41FAA] # 1 126 4 129 129 240 100.0 2e-62 MKKLLFGLCFSMFLLLQGCSAMMALSGDQNPDFKIITKGTSKSVIESQPIKAIFNETQKN GNTVVKYQYTVGKEPSIGRAVVYVLLDSLTLFISELFTMPAEMAHSGTQKTIMVEYNPQG EAVRVF >gi|292606549|gb|ADGG01000061.1| GENE 18 17956 - 18744 981 262 aa, chain + ## HITS:1 COG:FN1732 KEGG:ns NR:ns ## COG: FN1732 COG0253 # Protein_GI_number: 19705053 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Fusobacterium nucleatum # 3 260 8 265 265 397 78.0 1e-110 MKLDFIKINPAGNITILIDNFNIYDKDIAKISEELMREDNLHAEQVGFIKDNHLQMMGGE FCGNASRSFASLLAFRDKDFSKQKIYKITCSGEDEILAVDVREGQTENSFLAKIKMPKFK SLEELKIDNYKLGLVKFSGIDHFIFDVAENKEDNFEKVIDSVKNYLSDKDFSAFGIMFFD RQNLSMKPYVYVKDIESGIFENSCASGTTALGYYLKKYKNLDRAKIIQPNGWLEYIIEND EIYIDGSVEIVAEGKVYIQKKG >gi|292606549|gb|ADGG01000061.1| GENE 19 18748 - 19359 540 203 aa, chain + ## HITS:1 COG:FN1731 KEGG:ns NR:ns ## COG: FN1731 COG0512 # Protein_GI_number: 19705052 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Fusobacterium nucleatum # 1 203 1 203 203 355 85.0 4e-98 MFLMIDNYDSFVYNLVSYFLEENIEMEIIRNDLVDLKYIEDLIKQDKLEGIIISPGPKSP KDCGLCNEIVKNFYQQVPIFGVCLGHQIIGYTFGAEVKKGKSPVHGKVHKIKTSSSNIFK NLPRELNVTRYHSLVVEKEHLLEEFNVDAETEDGVLMALSHKKYPLYSVQFHPEAVLTEY GHEMLRNFLDLAREWRVKNANRA >gi|292606549|gb|ADGG01000061.1| GENE 20 19343 - 20686 1450 447 aa, chain + ## HITS:1 COG:FN1730 KEGG:ns NR:ns ## COG: FN1730 COG0147 # Protein_GI_number: 19705051 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Fusobacterium nucleatum # 1 447 1 453 453 689 85.0 0 MQIELKKLEKYIDIYDIFRILKKENNNKIAFLDSSLKNKYGRYSIIGIDPYLELKENNKK FYINDVLSEENFEEYLAKFLKENKQENNSILPLISGGIVYFSYDYGRKFENIATRHKKDL DIPEAIVTFYKTYIVEDIEKQEIYISYQDKKDYDNLINILEKTNLVKENLVKKNSLANFK SNFEKEEYLKAIKSTIDYIIEGDIYIMNLTQRLMIESQKSPLEVFSYLRKFNPAPFSAYL DFQDFQLVSASPERFIKMKDRLIETRPIKGTRKRGATEEEDLALKNELANSEKDKSELLM IVDLERNDLNRICELKSVVVDELFEVETYSTVFHLVSTIRGKLRKDYDFVDLIRATFPGG SITGAPKIRAMEIIDELENSRRDAYTGSIGYISFNGDCDLNIIIRTAIHKDNKYYLGVGG GITCESELDFEYEETLQKAKAILEALC >gi|292606549|gb|ADGG01000061.1| GENE 21 20680 - 21414 608 244 aa, chain + ## HITS:1 COG:FN1729 KEGG:ns NR:ns ## COG: FN1729 COG0115 # Protein_GI_number: 19705050 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Fusobacterium nucleatum # 1 237 1 237 249 334 78.0 1e-91 MLIELDDGFSFGLGLFETILLFKGKAVFLDEHLVRINQSIINLDLNIDNLEKNEVYQYLE TNKSELEHEVLKIVLTEKNRLFIKRAYTYTDEDYKKAFSLNISKVQRNESSIFTFHKTLN YADNIFEKKKSKKLGYDEPIFLNSRSLVTEGATSNIFIIVNNEIYTPKLSSGLLNGIIRQ YIISNYPVIETDIDLEFLNKADEIFLTNSLFGIMPVSSLENKKLKSQKISREILSKYLNF IKVL >gi|292606549|gb|ADGG01000061.1| GENE 22 21862 - 23289 1996 475 aa, chain + ## HITS:1 COG:FN1536 KEGG:ns NR:ns ## COG: FN1536 COG0277 # Protein_GI_number: 19704868 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Fusobacterium nucleatum # 1 475 1 475 475 905 95.0 0 MANRVYNKVTEELVEKFKKIVPGKVYTKDEINKDFFHDEMPIYGEGEPEVVIDVTTTEAI SEIMKLCYENNIPVIPRGAGTGLTGASVAVTGGVMLNMTKMNKILSYDLENFVVKVEPGV LLNDLAEDALKQGLLYPPDPGEKFATLGGNVSTNAGGMRAVKYGTTRDYVRAMTVVLPTG EIIKLGATVSKTSTGYSLLNLMIGSEGTLGVITELTLKLIPAPKETISLIIPYENLDECI ATVPKFFMNHLQPQALEFMEREIVLASERYIGKSVFPKKLEGVDIGAYLLVTFDGDNMEA LEEITEKASEIVLEAGALDVLVADTPAKKKDAWAARSSFLEAIEAETKLLDECDVVVPVN QIAPYLHYVNETGKKYDFTVKSFGHAGDGNLHIYACSNDMEMAEFKRQVEEFLTDIYNKA SELGGLISGEHGIGYGKMDYLANFSGEINMRLMKGIKEVFDPKMILNPNKVCYRA >gi|292606549|gb|ADGG01000061.1| GENE 23 23329 - 24465 1681 378 aa, chain + ## HITS:1 COG:FN1535 KEGG:ns NR:ns ## COG: FN1535 COG1960 # Protein_GI_number: 19704867 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 378 1 378 378 702 94.0 0 MAYLISEEAQDLLKDVKKFCDNEVREQCKEYDKSGEWPKEIYDKAIEQGYQALEVPEEFG GPGLSRVDVAALIEEMAIADAGFATTISASGLAMKPVLIAGSHDQKQKMCDLVLEGGLGA FCLTEPGAGSDASAGRTTAVKDGDEYVLNGRKCFITNGEMASFYCITAITDKEKGLKGIS MFFVEKGTKGLSTGKHEDKMGIRTSNTCDVVLEDCRVPASALLGKEGEGFTIAMKTLDQA RSWIACIAVGIAQRGIQEAITYGKERIQFGKPIIKNQALQFKIADMEIKTETARQMVAHA LTKMDLGLPYGKESAIAKCYAGDIAMEVSSEAIQIFGGYGYSREYPVEKLLRDAKIFQIF EGTNEIQRIVIANNVIGR >gi|292606549|gb|ADGG01000061.1| GENE 24 24475 - 25254 1250 259 aa, chain + ## HITS:1 COG:FN1534 KEGG:ns NR:ns ## COG: FN1534 COG2086 # Protein_GI_number: 19704866 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Fusobacterium nucleatum # 1 259 1 259 259 387 85.0 1e-108 MEILVCIKQVADDSVEIFMNEKTGKAALEGIEKVVNAFDTYALEMATRLKEAKGDATISV LSLGGEDVTNSLKNCLAVGADEAFYVKDEAYQEKDAVIVAEALSKAIKNIEEKRAKKFDI IFCGKETTDFATGQVGIMLANELNYGIVTNLVDIDTEATKVIAKKETETGYEKVELASPC IVTVNKPNYEPRYPTIKSKMAARKKEITEISVEVASESAMKEVKLFSPPKRQAGVKIKTG TAEEMVAQAMQKMLEAKVF >gi|292606549|gb|ADGG01000061.1| GENE 25 25266 - 26234 1445 322 aa, chain + ## HITS:1 COG:FN1533 KEGG:ns NR:ns ## COG: FN1533 COG2025 # Protein_GI_number: 19704865 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Fusobacterium nucleatum # 1 322 1 323 323 501 84.0 1e-142 MERNIMVYIETVDNSPVVVSLEAIALAKKVSKENNKKVIAVLVGENLDEVAKKCFECGAD EVLYLEENKKELEAIGNALIVAKEKYNPSIIFLGSTLNGKDLANIIASDLKVPASVDVVA VKYENDKYFMTLPMYGGNILKEVTFEGDKTLVVAVRSGACKKEIIEGASGEVIKEKVCEK NLFTKIAEIVQEISESVNLEEAEIIVSGGRGMGSKENFELVKQLADVCGGVVGATRPATE DEWIPRSHQVGQSGKIVAPKLYIACGISGATQHISGIMGSDYIVAINKDEDAPIFDVADI GIVGNVMDIIPLMIEEIKKVKA >gi|292606549|gb|ADGG01000061.1| GENE 26 26302 - 26685 495 127 aa, chain + ## HITS:1 COG:FN1532 KEGG:ns NR:ns ## COG: FN1532 COG1380 # Protein_GI_number: 19704864 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Fusobacterium nucleatum # 1 127 1 127 127 169 87.0 9e-43 MGQWIIILALALIGQFVSDLISFPIPKTIIASIILFLLLEFKVLKVEYFKGVLAGCKKYL AFLFLPVGVGIMTQLNSAPAMVYVKVLLIMIISTILIMLVTGLIADFIIKVQEKILGNKD EKEAKNE >gi|292606549|gb|ADGG01000061.1| GENE 27 26678 - 27388 776 236 aa, chain + ## HITS:1 COG:FN1531 KEGG:ns NR:ns ## COG: FN1531 COG1346 # Protein_GI_number: 19704863 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Fusobacterium nucleatum # 1 235 10 244 244 338 85.0 4e-93 MSDIIHNIIFSPFFGIILSLVTYEIGKYLFGKTKSIFCNPLLIGILLSILFLLCFDIPFE AYNKGGSIIKLFISPVESVIIGVALYEQFQILKRNWFPILLSTVLGSTFSIIILYILGKV FALPDDIFYATLPKSVTTAIALDIATKFGWNEALIPMMTVSTGIIGAVIAPLVAKFIKSP VAKGLAIGTSSHAVGTSKAIEMGEVEGAMSGLALSLAAISTSFIIPILLTTIFKII >gi|292606549|gb|ADGG01000061.1| GENE 28 27554 - 27718 69 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237738943|ref|ZP_04569424.1| ## NR: gi|237738943|ref|ZP_04569424.1| predicted protein [Fusobacterium sp. 2_1_31] # 1 54 1 54 54 80 100.0 4e-14 MTIERVYINTYKKGDVIMHFLEFKRRFSLLNEEEKEFIYKLKLKDAIDFLRTIY >gi|292606549|gb|ADGG01000061.1| GENE 29 27918 - 28577 1111 219 aa, chain + ## HITS:1 COG:FN1589 KEGG:ns NR:ns ## COG: FN1589 COG2932 # Protein_GI_number: 19704910 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 219 1 219 219 337 82.0 8e-93 MSFGTTLKKIRLKHKDSLRGLAKKINLHFTFIDKVEKGTAPISNNFIERVIEVYPDEEKT LKKEYLKENLPKVFNKDESIKILEDSEVLNLPVYGKASAGRGYLNMDKPDYYMPITKGDF SLNSFFVEITGDSMEPTLEDGEYALVDPNNTAYVKNKIYVVTYNDEGYIKRVELKEKKKV ITLKSDNPDYDDIDIPEEMQEYFKINGRVVEVISKKRIL >gi|292606549|gb|ADGG01000061.1| GENE 30 28687 - 29937 2007 416 aa, chain - ## HITS:1 COG:FN1591 KEGG:ns NR:ns ## COG: FN1591 COG2878 # Protein_GI_number: 19704912 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Fusobacterium nucleatum # 1 368 1 381 385 452 78.0 1e-127 MEAIMMPVVVLGITGILMGLFLAYASKKFEVEVDPKVEAILAVLPGANCGACGYPGCAGY ASGVALEGAKMTLCAPGGPKVIEKLGEIMGVAVEIPVKKKPVKKTVEKKVVAQTGDPISA SAEFIEKNKRMLNKFKDAFDAGDKEAYEKLENLAKTAGKDELLKYYEEIKTGKIIPDGSA PAVPIGDPISASAEFIEKNKRMLNKFKDAFDAKDKEAYEKLENLAKTAGKDELLKCFEEI KAGKIIASGSAPVAAVKLEPITATKEFVEKNKRMLNKFKDAFDAKDKEAYEKLEGLAKST GKDDLLKCFEEIKAGKVVPDPATMTDAPAPKAEDSKKQEASYCSVLGDGLCVPEQNEKAK EEMVKQAEPPKTAEELEKDKQAASYCSILGDGLCVPEENEQMVKQNLTKELDKEVK >gi|292606549|gb|ADGG01000061.1| GENE 31 29962 - 30546 913 194 aa, chain - ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 1 194 1 194 194 278 95.0 4e-75 MSIGGLFSIIVTSIFINNIIFAKFLGCCPFMGVSKKVDSSLGMGMAVTFVITIASGVTWL AYRMALEPLGLGYLQTIAFILIIASLVQFVEMAIKKTSPSLYKALGVFLPLITTNCAVLG VAIINIQVGYNFIETIVNGFGVAVGFSLALLLLAGIRERLEFANTPKNFKGVPIAFITAG LLAMAFMGFSGMQI >gi|292606549|gb|ADGG01000061.1| GENE 32 30543 - 31160 911 205 aa, chain - ## HITS:1 COG:FN1593 KEGG:ns NR:ns ## COG: FN1593 COG4660 # Protein_GI_number: 19704914 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Fusobacterium nucleatum # 1 191 1 191 205 308 97.0 3e-84 MKKLGILTAGIFKENPVFVLMLGLCPTLGVTSSAINGFSMGLAVIAVLACSNGLISLFKK FIPDEVRIPAFIMIIATLVTVVDMVMNAYTPDLYKVLGLFIPLIVVNCIVLGRAESFASK NGVIDSILDGIGSGIGFTVSLTFLGAIREILGNGSVFGISLVPANFTPALIFILAPGGFI TIGIIMACINMKKERDAKKKKVTKK >gi|292606549|gb|ADGG01000061.1| GENE 33 31160 - 31693 857 177 aa, chain - ## HITS:1 COG:FN1594 KEGG:ns NR:ns ## COG: FN1594 COG4659 # Protein_GI_number: 19704915 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Fusobacterium nucleatum # 1 177 1 177 177 295 89.0 4e-80 MENRYIHFGIVLGLIAAISAGLLGGVNDFTSKVIAENTLKIVNEARKQVLPTAASFKEEE AKEAGGIQYIPGFNEAGEVVGYVASVAEPGYGGDINFVVGIDNDAKVTGLNVVTSSETPG LGAKINEKEWQDHWIGKDATYEFNKSTDAFAGATISPKAVYTGVIKALNTYQNEVSK >gi|292606549|gb|ADGG01000061.1| GENE 34 31683 - 32627 1136 314 aa, chain - ## HITS:1 COG:FN1595 KEGG:ns NR:ns ## COG: FN1595 COG4658 # Protein_GI_number: 19704916 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Fusobacterium nucleatum # 1 314 1 314 314 534 90.0 1e-151 MSTILKTGPAPHIRTKETVESVMYDVVIALVPALLMAIYSFGVRALILTSVSVLTCIATE YLCQKALKRDIEAFDGSAILTGILFSFVVPAIMPLQYVVIGNIVAITLGKMVYGGLGHNI FNPALVGRAFVQASWPVAITTFAYDGMSGATVLDAMKRGIPLTDALLQNGDQYLNAFIGR MGGCLGETSSLALLLGGAYLIYKKQIDWKVPATMIGTVFILTWAFGADPIMQIFSGGLFL GAFFMATDMVTSPTTSKGRVVFAFGIGLLVSLIRMKGGYPEGTAYAILIMNGVVPLIDRY IRPKKFGGVSTNGK >gi|292606549|gb|ADGG01000061.1| GENE 35 32654 - 33961 2150 435 aa, chain - ## HITS:1 COG:FN1596 KEGG:ns NR:ns ## COG: FN1596 COG4656 # Protein_GI_number: 19704917 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Fusobacterium nucleatum # 1 435 7 441 441 808 94.0 0 MKFFGFRGGVHPPENKIQTEHLPIEKLESPNEIFVPLLQHIGAPLNPIVNVGDRVLKGQK IADAEGLAVPVHAPVSGTVTKIENRVYPLSGKVMTIFIENDKKEEWAELTKIANWETADK KELLDIIREKGIVGIGGATFPTHVKLNPPPNTKLDSLILNGAECEPYLNSDNRLMLENPK SIVEGIKIIKKILNVPDVYVGIEDNKPEAIESMKKATEGTGINIVPLKTKYPQGGEKQLI KSILDRQVPSGQLPSAVGVVVQNTGTAAAIYEAVVNGKPLIEKVVTVTGKAIKNPKNLKV AIGTPFSYILDYCGINRDEMERLVMGGPMMGLAQMTEEATVVKGTSGLLALTNEEMRPYK TKACISCSKCVSACPMGLAPLMFDRLAAAKEYEAMAGHNLMDCIECGSCAYICPANRPLA EAIKTGKAKLRAKKK >gi|292606549|gb|ADGG01000061.1| GENE 36 34037 - 34612 1005 191 aa, chain - ## HITS:1 COG:FN1597 KEGG:ns NR:ns ## COG: FN1597 COG0193 # Protein_GI_number: 19704918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Fusobacterium nucleatum # 1 188 1 188 191 301 85.0 6e-82 MKVVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK PQTFMNLSGNALIEIVNFYKLDPKKDIIVVYDDMSLDFGDIRIREKGSSGGHNGIKSIIS HIGEEFIRIKCGIGAKKEDAVEHVLGEFSQSEQKELVEFLEKLNECIIDILTVHNLERTM QKYNKKKEKLK Prediction of potential genes in microbial genomes Time: Thu May 19 22:42:59 2011 Seq name: gi|292606548|gb|ADGG01000062.1| Fusobacterium sp. 1_1_41FAA cont1.62, whole genome shotgun sequence Length of sequence - 806 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 6 - 806 987 ## FN2058 hypothetical protein Predicted protein(s) >gi|292606548|gb|ADGG01000062.1| GENE 1 6 - 806 987 266 aa, chain - ## HITS:1 COG:no KEGG:FN2058 NR:ns ## KEGG: FN2058 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 266 1530 1794 1794 412 80.0 1e-114 DTDTAGIKDYKSHAYGVAYVHEDETVRLGESTGWYAGIVHNTLDFKDIGNSKEEQLQAKL GIFKSVPFDENNSLNWTISGDIFAGHNKMNRKYLVVDEIFNAKSKYYTYGVGLKNELSKE FRLSEDFSIKPYAALNLEYGRMTKIREKSGEVRLEVKSNDYFSVKPEIGAELVFKHYFGR NALKAGVSVAYENELGRVANPKNKARVGYTTAGWYDLRGEKEDRRGNVKSDLNIGWDNQR IGVTANVGYDTKGNNVRGGVGLRVIF Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:03 2011 Seq name: gi|292606547|gb|ADGG01000063.1| Fusobacterium sp. 1_1_41FAA cont1.63, whole genome shotgun sequence Length of sequence - 1008 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 798 738 ## COG0675 Transposase and inactivated derivatives - Prom 820 - 879 8.1 Predicted protein(s) >gi|292606547|gb|ADGG01000063.1| GENE 1 3 - 798 738 265 aa, chain - ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 265 1 273 407 261 50.0 1e-69 MEKAYKFRFYPTKTQLTILNCTFGCVRYVYNHFLDLKQELYNEEKKSMSYSQCSKALTAL KQEKEWLKDVDKFSLQNSLKDLDKAYKNFFSGRGYPKFKSKKDNRKSYRTNYTNNNIEFL DKWIKVPKLGKLKIRDKMKPQGRIINATITQVPSGKYYISLCCADVEAEKLESTNKNVGI DLGIKDFALTSDEISIENPKYLQKSLNKLAILQRKLSRKPKGSSNRNKARIKVARLFEKI SNQREDFLQKLSTMLIKEYDIICIE Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:04 2011 Seq name: gi|292606546|gb|ADGG01000064.1| Fusobacterium sp. 1_1_41FAA cont1.64, whole genome shotgun sequence Length of sequence - 935 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 933 1151 ## NT05HA_0523 autotransporter adhesin Predicted protein(s) >gi|292606546|gb|ADGG01000064.1| GENE 1 3 - 933 1151 310 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_0523 NR:ns ## KEGG: NT05HA_0523 # Name: not_defined # Def: autotransporter adhesin # Organism: A.aphrophilus # Pathway: not_defined # 3 280 659 932 2065 87 33.0 7e-16 WKANAGGNVDGTPTSTLVKSGDEVVFKAGDNITVKQDLSAGKQEYTYKLNKDLVGLDSVT TKKITIPGATAGTNDVVIDKDGISAGNKVIKNVAQGINPTDAVNVSQLTKLGTNTIQLGG DNSTVTATQQLDKTGGIKFDIVGANGITTEAKNGTVTVKVDSATIGANSKISYTANGAAP KKEVTLADGLNFQDGKFTKASVDTAGKVKYDTVTQGITVTAGKATVPTTDGLTTAKDIAN VVNNLGWKANAGGNVDGTPTSTLVKSGDEVVFKAGDNITVKQDLSAGKQEYTYKLNKQLK DLTSAEFKTA Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:09 2011 Seq name: gi|292606545|gb|ADGG01000065.1| Fusobacterium sp. 1_1_41FAA cont1.65, whole genome shotgun sequence Length of sequence - 904 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 66 - 125 8.3 1 1 Tu 1 . + CDS 147 - 317 182 ## gi|294784054|ref|ZP_06749374.1| ISCpe2, transposase OrfB + Prom 444 - 503 3.7 2 2 Tu 1 . + CDS 558 - 903 375 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606545|gb|ADGG01000065.1| GENE 1 147 - 317 182 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294784054|ref|ZP_06749374.1| ## NR: gi|294784054|ref|ZP_06749374.1| ISCpe2, transposase OrfB [Fusobacterium sp. 1_1_41FAA] # 1 45 1 45 266 80 82.0 2e-14 MEKAYKFRFYPTKTQITILNCTFGCVRYVYNHFLGLKQDYITKRKNLCHIINVAKH >gi|292606545|gb|ADGG01000065.1| GENE 2 558 - 903 375 115 aa, chain + ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 5 115 151 260 407 106 50.0 9e-24 MKPQGRIINATITQAPSGKYYISLCCTDVEAEKLESTNKNVGIDLGIKNFALTSDEILIE NPKYLQKSLNKLAILQRRLSRKPKGSSNRNKARIKVARLFEKISNQREDFLQKLS Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:13 2011 Seq name: gi|292606544|gb|ADGG01000066.1| Fusobacterium sp. 1_1_41FAA cont1.66, whole genome shotgun sequence Length of sequence - 867 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 50 - 814 836 ## CLK_A0269 putative IS transposase Predicted protein(s) >gi|292606544|gb|ADGG01000066.1| GENE 1 50 - 814 836 254 aa, chain - ## HITS:1 COG:no KEGG:CLK_A0269 NR:ns ## KEGG: CLK_A0269 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 1 253 1 258 480 261 56.0 2e-68 MANYVLTLALKTELWQEHILEKRLNIARMIYNSCLSEILKRHRKMINSSEYKGISNLDKK EQSKRYKELDKKYLLSKFELNKYVKPMTQKFKKNIGSQMGQELAERAFATYEKFKYGKAK KVYFKSYGNFYSVREKGNITGLRFFKEDCCIFWLGLKIPVIIKNNDKYAQSCFLDKLLYC RLLKRVVNGKNKYYVQITFKGTPPKKYKVGGENEIGIDIGTSTIAIVSDNKVELKILAEN IGINEKEKIRLQRN Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:17 2011 Seq name: gi|292606543|gb|ADGG01000067.1| Fusobacterium sp. 1_1_41FAA cont1.67, whole genome shotgun sequence Length of sequence - 856 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 816 904 ## CLK_A0269 putative IS transposase Predicted protein(s) >gi|292606543|gb|ADGG01000067.1| GENE 1 3 - 816 904 271 aa, chain - ## HITS:1 COG:no KEGG:CLK_A0269 NR:ns ## KEGG: CLK_A0269 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 1 271 1 276 480 291 58.0 2e-77 MANYVLTLALKTELWQEHILEKRLNIARMIYNSCLSEILKRHKKMINSSEYKGISNLDKK EPSKRYKELDKKYLISKFELNKYVKPMTQKFKKNIGSQMGQELAERAFATYEKFKYGKAK KVYFKSYENFYSVREKGNITGLRFFKEDCCISWLGLKIPVIIKNNDKYAQSCFLDKLLYC RLLKRVVNGKNKYYVQITFEGTPPKKHKVGRENEIGIDIGTSTIAIVSDNKVELKILAEN IEINEKEKTRLQRKLDRQRRANNPNKYNADG Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:21 2011 Seq name: gi|292606542|gb|ADGG01000068.1| Fusobacterium sp. 1_1_41FAA cont1.68, whole genome shotgun sequence Length of sequence - 796 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 93 - 794 629 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606542|gb|ADGG01000068.1| GENE 1 93 - 794 629 233 aa, chain - ## HITS:1 COG:alr7153 KEGG:ns NR:ns ## COG: alr7153 COG0675 # Protein_GI_number: 17233169 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 2 209 176 381 408 166 44.0 3e-41 QRELNKENVLGIDLGIDNLCTCVTNTGASFIIDGRKLKSINQYYNKINAKLQSIKDKQKI ERTTLRQKRITRKRNNRINDYLSKAARTIVNYCLNNDIGKLVLGYNEDFQRNSNIGSINN QNFVNIPYGKLRDKLIYLCKLYGIEFKLQEESYTSKASFFDGDEIPIYDKENLQEYVFSG KRIKRGLYQTSAGKLINADCNGALNILRKSKVVDLSVLYNRGELNTPKRIRVV Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:22 2011 Seq name: gi|292606541|gb|ADGG01000069.1| Fusobacterium sp. 1_1_41FAA cont1.69, whole genome shotgun sequence Length of sequence - 783 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 161 - 220 9.9 1 1 Tu 1 . + CDS 454 - 726 238 ## FMG_P0136 putative transposase Predicted protein(s) >gi|292606541|gb|ADGG01000069.1| GENE 1 454 - 726 238 90 aa, chain + ## HITS:1 COG:no KEGG:FMG_P0136 NR:ns ## KEGG: FMG_P0136 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 1 89 71 160 416 111 66.0 7e-24 MAQQILKEVDESFKSFFALLKLAKNGQYNGKIKLPNYLDKDGFTTLVIGFVRLKDDILIV PYSNSFKKTHQEVKVKLPSVLKDKKIKELE Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:25 2011 Seq name: gi|292606540|gb|ADGG01000070.1| Fusobacterium sp. 1_1_41FAA cont1.70, whole genome shotgun sequence Length of sequence - 748 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 129 - 746 604 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606540|gb|ADGG01000070.1| GENE 1 129 - 746 604 205 aa, chain - ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 3 202 173 372 407 213 54.0 2e-55 CTDVEVEKLESTNKNVGIDLGIKDFALTSDEISIENPKYLQKSLNKLAILQRKLSRKPKG SSNRNKARIKVARLFEKISNQREDFLQKLSTMLIKEYDIICIEDLQIKNMVKNHKLVRNI VDVSWSEFNRILEYKAKWYGKTVVRVDRFFASSQICNCCGYRNEEVKDLSVRKWTCPVCG AVHNRDINAAKNILKEGLRILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:25 2011 Seq name: gi|292606539|gb|ADGG01000071.1| Fusobacterium sp. 1_1_41FAA cont1.71, whole genome shotgun sequence Length of sequence - 726 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 95 - 154 8.9 1 1 Tu 1 . + CDS 195 - 726 350 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606539|gb|ADGG01000071.1| GENE 1 195 - 726 350 177 aa, chain + ## HITS:1 COG:TVN0764 KEGG:ns NR:ns ## COG: TVN0764 COG0675 # Protein_GI_number: 13541595 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma volcanium # 7 177 4 177 416 68 29.0 7e-12 MYLTLKQQVKHLSKKEFKNLKYLCHIAKNLKNQAIYNVRQHYFKNKKYLSYNENYEMLKN SKNYKKLNSNMAQQILKEVDESFKSFFVLLKLAKNGQYNGKIKLPNYLDKDGFTTLIIGF VRLKDDMLIVPYSNSFKKTHQEVKVKLSSVLKDKKIKEIRIIPKQHSRYFEIQYTYE Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:26 2011 Seq name: gi|292606538|gb|ADGG01000072.1| Fusobacterium sp. 1_1_41FAA cont1.72, whole genome shotgun sequence Length of sequence - 704 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 186 100 ## gi|294784069|ref|ZP_06749380.1| hypothetical protein HMPREF0400_02372 Predicted protein(s) >gi|292606538|gb|ADGG01000072.1| GENE 1 1 - 186 100 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294784069|ref|ZP_06749380.1| ## NR: gi|294784069|ref|ZP_06749380.1| hypothetical protein HMPREF0400_02372 [Fusobacterium sp. 1_1_41FAA] # 1 61 1 61 61 102 100.0 7e-21 CNNTRDSSTRRVLVIRHVLVEYELHENFSKHIGKLVCRHGAKLCNKETELLGTLKASITT T Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:30 2011 Seq name: gi|292606537|gb|ADGG01000073.1| Fusobacterium sp. 1_1_41FAA cont1.73, whole genome shotgun sequence Length of sequence - 669 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 14 - 667 165 ## PROTEIN SUPPORTED gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 Predicted protein(s) >gi|292606537|gb|ADGG01000073.1| GENE 1 14 - 667 165 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 [Bacillus selenitireducens MLS10] # 5 210 6 215 225 68 25 1e-12 QVSSGKYYISLCCTDVEVEKLESTNKNVGIDLGIKDFALTSDETIIENPKYLQKSLNKLA ILQRKLSRKPKGSSNRNKARIKVARLFEKISNQREDFLQKLSTELIRKYDIICMEDLQVK NMIKNHRLARNIADVSWSEFSRILEYKAKWYGKTIVRVDKFFASSQICNCCGYRNEEVKD LSVREWTCPICGAVHNRDINAAKNILKEGLKILGISA Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:31 2011 Seq name: gi|292606536|gb|ADGG01000074.1| Fusobacterium sp. 1_1_41FAA cont1.74, whole genome shotgun sequence Length of sequence - 652 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 167 215 ## gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 2 1 Op 2 . + CDS 175 - 360 61 ## gi|237744919|ref|ZP_04575400.1| predicted protein + Term 489 - 525 -0.6 Predicted protein(s) >gi|292606536|gb|ADGG01000074.1| GENE 1 3 - 167 215 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|169837733|ref|ZP_02870921.1| ## NR: gi|169837733|ref|ZP_02870921.1| hypothetical protein cdivTM_11647 [candidate division TM7 single-cell isolate TM7a] # 6 54 41 89 89 92 93.0 6e-18 STRRVLVMRHVLVGYELHEDFSKHIGKLVCRHGAKPCNKETELLGTLKASITTT >gi|292606536|gb|ADGG01000074.1| GENE 2 175 - 360 61 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237744919|ref|ZP_04575400.1| ## NR: gi|237744919|ref|ZP_04575400.1| predicted protein [Fusobacterium sp. 7_1] # 1 61 1 61 61 110 96.0 2e-23 MRIWYKCDGGESRKNILDGARLNPKHYGNRQSATKPEKESSTTIPREGSTIQAIGIGSGF A Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:40 2011 Seq name: gi|292606535|gb|ADGG01000075.1| Fusobacterium sp. 1_1_41FAA cont1.75, whole genome shotgun sequence Length of sequence - 627 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:40 2011 Seq name: gi|292606534|gb|ADGG01000076.1| Fusobacterium sp. 1_1_41FAA cont1.76, whole genome shotgun sequence Length of sequence - 593 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 - CDS 1 - 283 290 ## COG0675 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 277 - 591 167 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606534|gb|ADGG01000076.1| GENE 1 1 - 283 290 94 aa, chain - ## HITS:1 COG:DR0178 KEGG:ns NR:ns ## COG: DR0178 COG0675 # Protein_GI_number: 15805214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 2 94 269 361 409 117 50.0 6e-27 MLIKEYDIICMEDLQVKNMVKNHKLARNIVDVSWSEFNRILSYKAKWYGKTIVRVDKFFA SSQICNCCGYRNEEVKDLSMREWTCPVCGAVHNR >gi|292606534|gb|ADGG01000076.1| GENE 2 277 - 591 167 104 aa, chain - ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 89 160 247 407 77 47.0 4e-15 QVPSGKYYISLCCTDVEVEKLESTNKNVGIDLGIKDFALTSDEISIENPKYLQKSLNKLA ILQRKLSRKPKGSSNRNKARIKVARLFEKYQIKEKIFCKNYQQC Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:41 2011 Seq name: gi|292606533|gb|ADGG01000077.1| Fusobacterium sp. 1_1_41FAA cont1.77, whole genome shotgun sequence Length of sequence - 570 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 320 - 379 8.3 1 1 Tu 1 . + CDS 401 - 569 139 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|292606533|gb|ADGG01000077.1| GENE 1 401 - 569 139 56 aa, chain + ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 55 1 55 407 64 47.0 5e-11 MEKAYKFRFYPTKTQLTILNCTFGCVRYVYNHFLGLKQELYNKEKKSMSYSECSKE Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:42 2011 Seq name: gi|292606532|gb|ADGG01000078.1| Fusobacterium sp. 1_1_41FAA cont1.78, whole genome shotgun sequence Length of sequence - 557 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 236 183 ## CLD_A0161 putative IS transposase 2 1 Op 2 . - CDS 249 - 488 249 ## COG1943 Transposase and inactivated derivatives Predicted protein(s) >gi|292606532|gb|ADGG01000078.1| GENE 1 2 - 236 183 78 aa, chain - ## HITS:1 COG:no KEGG:CLD_A0161 NR:ns ## KEGG: CLD_A0161 # Name: not_defined # Def: putative IS transposase # Organism: C.botulinum_B1 # Pathway: not_defined # 1 78 1 79 480 70 54.0 1e-11 MANYVLTLALKTELWQEHILEKRLNIARMIYNSCLSEILKRHKKMINSSEYKGISNLDKK EPSKRYKELDKKYLISKF >gi|292606532|gb|ADGG01000078.1| GENE 2 249 - 488 249 79 aa, chain - ## HITS:1 COG:asl7246 KEGG:ns NR:ns ## COG: asl7246 COG1943 # Protein_GI_number: 17233262 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 12 76 1 65 70 100 69.0 9e-22 METDLDHIHILIECSPQHFIPNILKIFKGISARKLFLKHPEIKNKLWNGHLWNPSYFVAT VSENTEEQIKRYIQTQKER Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:44 2011 Seq name: gi|292606531|gb|ADGG01000079.1| Fusobacterium sp. 1_1_41FAA cont1.79, whole genome shotgun sequence Length of sequence - 536 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 536 634 ## gi|294784082|ref|ZP_06749386.1| conserved hypothetical protein Predicted protein(s) >gi|292606531|gb|ADGG01000079.1| GENE 1 2 - 536 634 178 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294784082|ref|ZP_06749386.1| ## NR: gi|294784082|ref|ZP_06749386.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA] # 1 178 1 178 178 238 100.0 9e-62 DTSTIGANTKLSYTANGDATKKEVTLADGLNFQDGKFTKASVDTAGKVKYDTVTQGITVT DGKATVPATDGLTTAKDIANVVNNLGWKANAGGNVDGTSTSTLVKSGDEVVFKAGDNLTV KQDLSAGKQEYTYKLNKDLVGLDSVTTKKITIPGATAGTNDVVIDKDGISAGNKVIKN Prediction of potential genes in microbial genomes Time: Thu May 19 22:43:52 2011 Seq name: gi|292606530|gb|ADGG01000080.1| Fusobacterium sp. 1_1_41FAA cont1.80, whole genome shotgun sequence Length of sequence - 501 bp Number of predicted genes - 0