Prediction of potential genes in microbial genomes Time: Mon Jul 11 04:59:27 2011 Seq name: gi|289777623|gb|GG745508.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.1, whole genome shotgun sequence Length of sequence - 1875766 bp Number of predicted genes - 1740, with homology - 1706 Number of transcription units - 1023, operones - 341 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Op 1 3/0.346 - CDS 1560 - 1865 303 ## COG5544 Predicted periplasmic lipoprotein - Term 1889 - 1918 1.1 3 2 Op 2 3/0.346 - CDS 1925 - 3283 1357 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 3339 - 3398 3.0 4 3 Op 1 3/0.346 - CDS 3401 - 6052 2608 ## COG1042 Acyl-CoA synthetase (NDP forming) 5 3 Op 2 3/0.346 - CDS 6087 - 6785 427 ## COG3148 Uncharacterized conserved protein - Term 6816 - 6848 4.6 6 3 Op 3 . - CDS 6855 - 7280 320 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 7328 - 7387 5.1 + Prom 7276 - 7335 4.2 7 4 Tu 1 . + CDS 7484 - 8569 1276 ## COG0566 rRNA methylases + Term 8587 - 8625 3.6 - Term 8580 - 8608 1.0 8 5 Tu 1 . - CDS 8627 - 9316 734 ## COG0692 Uracil DNA glycosylase - Prom 9411 - 9470 8.8 + Prom 9502 - 9561 5.2 9 6 Tu 1 . + CDS 9627 - 10010 554 ## COG3445 Acid-induced glycyl radical enzyme + Term 10027 - 10066 9.1 - Term 10020 - 10049 3.5 10 7 Tu 1 . - CDS 10056 - 11387 1631 ## COG0513 Superfamily II DNA and RNA helicases - Prom 11524 - 11583 1.8 + Prom 11421 - 11480 3.6 11 8 Tu 1 . + CDS 11518 - 12255 567 ## COG4123 Predicted O-methyltransferase 12 9 Tu 1 . - CDS 12240 - 13859 1742 ## COG0029 Aspartate oxidase 13 10 Op 1 11/0.023 + CDS 14280 - 14855 289 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 14 10 Op 2 10/0.030 + CDS 14888 - 15538 550 ## COG3073 Negative regulator of sigma E activity 15 10 Op 3 8/0.039 + CDS 15538 - 16494 804 ## COG3026 Negative regulator of sigma E activity 16 10 Op 4 4/0.265 + CDS 16491 - 16970 543 ## COG3086 Positive regulator of sigma E activity + Prom 17025 - 17084 5.1 17 11 Op 1 14/0.014 + CDS 17156 - 18955 2469 ## COG0481 Membrane GTPase LepA 18 11 Op 2 13/0.016 + CDS 18969 - 19943 1192 ## COG0681 Signal peptidase I + Term 19958 - 20003 14.0 + Prom 19949 - 20008 2.7 19 12 Op 1 18/0.000 + CDS 20193 - 20873 721 ## COG0571 dsRNA-specific ribonuclease 20 12 Op 2 16/0.000 + CDS 20870 - 21775 1162 ## COG1159 GTPase 21 12 Op 3 9/0.037 + CDS 21787 - 22524 630 ## COG1381 Recombinational DNA repair protein (RecF pathway) 22 12 Op 4 8/0.039 + CDS 22536 - 23267 1181 ## COG0854 Pyridoxal phosphate biosynthesis protein 23 12 Op 5 . + CDS 23267 - 23647 414 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 23723 - 23776 -0.2 24 13 Op 1 1/0.538 - CDS 23660 - 23920 287 ## COG1145 Ferredoxin - Term 23938 - 23968 0.2 25 13 Op 2 . - CDS 23977 - 24825 1101 ## COG1737 Transcriptional regulators - Prom 24869 - 24928 7.1 + Prom 24853 - 24912 3.7 26 14 Op 1 2/0.421 + CDS 25038 - 25673 694 ## COG0560 Phosphoserine phosphatase 27 14 Op 2 . + CDS 25769 - 26245 527 ## COG0590 Cytosine/adenosine deaminases + Term 26377 - 26415 0.0 28 15 Tu 1 . - CDS 26242 - 27858 1801 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Prom 27924 - 27983 4.6 + Prom 27737 - 27796 4.5 29 16 Tu 1 . + CDS 28037 - 31921 5053 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 31953 - 31987 7.0 30 17 Op 1 . + CDS 32513 - 33934 1653 ## COG0642 Signal transduction histidine kinase 31 17 Op 2 . + CDS 33943 - 34650 665 ## KP1_4134 hypothetical protein 32 17 Op 3 4/0.265 + CDS 34637 - 35974 1775 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 33 17 Op 4 . + CDS 36040 - 36378 608 ## COG0347 Nitrogen regulatory protein PII + Term 36474 - 36509 2.4 - Term 36424 - 36451 -0.9 34 18 Tu 1 . - CDS 36453 - 37643 1781 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 37670 - 37729 5.0 + Prom 37846 - 37905 5.3 35 19 Tu 1 . + CDS 37969 - 39222 1767 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 39245 - 39272 1.5 - Term 39233 - 39260 1.5 36 20 Tu 1 . - CDS 39278 - 39700 445 ## COG2259 Predicted membrane protein - Prom 39836 - 39895 5.5 + Prom 39721 - 39780 3.2 37 21 Tu 1 . + CDS 40001 - 41137 1371 ## COG0477 Permeases of the major facilitator superfamily + Term 41161 - 41198 -1.0 38 22 Tu 1 . - CDS 41134 - 42345 1145 ## COG3711 Transcriptional antiterminator - Prom 42434 - 42493 2.5 + Prom 42535 - 42594 3.2 39 23 Op 1 9/0.037 + CDS 42638 - 43174 728 ## COG3683 ABC-type uncharacterized transport system, periplasmic component 40 23 Op 2 . + CDS 43165 - 44145 1082 ## COG2215 ABC-type uncharacterized transport system, permease component 41 23 Op 3 . + CDS 44245 - 45081 566 ## Kvar_1193 hypothetical protein + Term 45092 - 45119 0.1 - Term 45074 - 45115 5.6 42 24 Tu 1 . - CDS 45128 - 45931 1161 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 45970 - 46029 5.0 43 25 Tu 1 . + CDS 46052 - 46786 975 ## COG0565 rRNA methylase + Prom 46917 - 46976 1.8 44 26 Tu 1 . + CDS 47039 - 47530 499 ## COG1959 Predicted transcriptional regulator 45 27 Op 1 20/0.000 + CDS 47710 - 48924 1626 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 46 27 Op 2 14/0.014 + CDS 48951 - 49337 584 ## COG0822 NifU homolog involved in Fe-S cluster formation 47 27 Op 3 10/0.030 + CDS 49355 - 49678 561 ## COG0316 Uncharacterized conserved protein + Term 49694 - 49731 6.6 48 28 Op 1 11/0.023 + CDS 49732 - 50268 469 ## COG1076 DnaJ-domain-containing proteins 1 49 28 Op 2 13/0.016 + CDS 50284 - 52134 2451 ## COG0443 Molecular chaperone 50 28 Op 3 9/0.037 + CDS 52136 - 52471 455 ## COG0633 Ferredoxin 51 28 Op 4 2/0.421 + CDS 52473 - 52673 403 ## COG2975 Uncharacterized protein conserved in bacteria + Term 52737 - 52770 4.3 52 29 Op 1 . + CDS 52781 - 54067 1761 ## COG0260 Leucyl aminopeptidase + Term 54113 - 54154 3.6 53 29 Op 2 . + CDS 54165 - 54941 1112 ## Kvar_1205 SseB family protein + Term 54943 - 54979 6.1 - Term 54833 - 54870 -0.4 54 30 Tu 1 . - CDS 55012 - 55854 373 ## Kvar_1206 hypothetical protein - Term 55880 - 55908 -1.0 55 31 Tu 1 . - CDS 55957 - 56607 766 ## KPN_02852 hypothetical protein - Prom 56678 - 56737 3.4 - Term 56650 - 56679 -0.4 56 32 Tu 1 . - CDS 56772 - 57629 1008 ## COG2897 Rhodanese-related sulfurtransferase - Prom 57777 - 57836 5.5 + Prom 57736 - 57795 6.1 57 33 Op 1 7/0.057 + CDS 57836 - 62785 6311 ## COG2373 Large extracellular alpha-helical protein 58 33 Op 2 1/0.538 + CDS 62786 - 65110 1847 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC + Prom 65118 - 65177 2.8 59 34 Tu 1 . + CDS 65271 - 65702 478 ## COG0105 Nucleoside diphosphate kinase + Prom 65917 - 65976 5.9 60 35 Tu 1 . + CDS 66118 - 67284 1608 ## COG0820 Predicted Fe-S-cluster redox enzyme + Term 67292 - 67333 7.1 + Prom 67316 - 67375 3.7 61 36 Op 1 10/0.030 + CDS 67561 - 68553 780 ## COG1426 Uncharacterized protein conserved in bacteria 62 36 Op 2 11/0.023 + CDS 68580 - 69701 1487 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 69708 - 69739 4.5 + Prom 69713 - 69772 2.5 63 37 Op 1 12/0.016 + CDS 69793 - 71067 1657 ## COG0124 Histidyl-tRNA synthetase 64 37 Op 2 9/0.037 + CDS 71102 - 71722 731 ## COG2976 Uncharacterized protein conserved in bacteria 65 37 Op 3 7/0.057 + CDS 71733 - 72911 1231 ## COG1520 FOG: WD40-like repeat + Term 72931 - 72979 7.0 66 38 Tu 1 . + CDS 73025 - 74503 2007 ## COG1160 Predicted GTPases + Term 74512 - 74537 -0.5 67 39 Op 1 . + CDS 74621 - 75700 702 ## KPK_1280 oxidoreductase, NAD-binding 68 39 Op 2 . + CDS 75750 - 75968 152 ## Kvar_1219 hypothetical protein + Term 76045 - 76092 -0.5 69 40 Tu 1 . - CDS 75952 - 77343 1252 ## COG1570 Exonuclease VII, large subunit - Prom 77378 - 77437 4.7 + Prom 77409 - 77468 5.0 70 41 Op 1 13/0.016 + CDS 77502 - 78968 1921 ## COG0516 IMP dehydrogenase/GMP reductase + Term 78974 - 79010 7.2 71 41 Op 2 . + CDS 79036 - 80613 2502 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 80663 - 80693 2.1 + Prom 80642 - 80701 2.8 72 42 Tu 1 . + CDS 80945 - 81103 109 ## Psyr_3499 helix-turn-helix, AraC type 73 43 Tu 1 . - CDS 81100 - 82008 579 ## COG1893 Ketopantoate reductase - Prom 82077 - 82136 2.8 - Term 82296 - 82336 -0.8 74 44 Op 1 5/0.153 - CDS 82398 - 83876 1221 ## COG1012 NAD-dependent aldehyde dehydrogenases 75 44 Op 2 4/0.265 - CDS 83911 - 85245 1144 ## COG0477 Permeases of the major facilitator superfamily 76 44 Op 3 . - CDS 85316 - 86905 1373 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 86932 - 86991 3.4 + Prom 86864 - 86923 5.9 77 45 Op 1 . + CDS 87025 - 87930 217 ## COG0583 Transcriptional regulator 78 45 Op 2 . + CDS 88024 - 88248 151 ## COG3666 Transposase and inactivated derivatives - Term 88803 - 88847 5.1 79 46 Tu 1 . - CDS 88862 - 90151 1085 ## COG0477 Permeases of the major facilitator superfamily - Prom 90175 - 90234 2.9 + Prom 90009 - 90068 2.4 80 47 Tu 1 . + CDS 90249 - 91133 858 ## COG0583 Transcriptional regulator + Term 91195 - 91230 1.1 81 48 Tu 1 . - CDS 91233 - 91406 230 ## KPK_1301 hypothetical protein - Prom 91590 - 91649 9.5 82 49 Tu 1 . + CDS 91885 - 94005 1910 ## COG2200 FOG: EAL domain - Term 94005 - 94036 3.1 83 50 Op 1 11/0.023 - CDS 94061 - 95521 1958 ## COG0248 Exopolyphosphatase 84 50 Op 2 4/0.265 - CDS 95597 - 97657 2717 ## COG0855 Polyphosphate kinase - Prom 97750 - 97809 8.5 85 51 Op 1 21/0.000 - CDS 97838 - 98479 603 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 86 51 Op 2 . - CDS 98476 - 99513 1245 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase - Prom 99552 - 99611 4.9 + Prom 99650 - 99709 2.6 87 52 Op 1 1/0.538 + CDS 99777 - 100670 277 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 88 52 Op 2 . + CDS 100680 - 102113 1839 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 102192 - 102221 0.4 + Prom 102236 - 102295 7.0 89 53 Op 1 5/0.153 + CDS 102331 - 102957 877 ## COG0035 Uracil phosphoribosyltransferase + Term 102976 - 103008 4.0 + Prom 102960 - 103019 5.8 90 53 Op 2 6/0.092 + CDS 103044 - 104330 1034 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 104342 - 104374 5.3 + Prom 104340 - 104399 4.9 91 54 Tu 1 . + CDS 104453 - 105130 670 ## COG0593 ATPase involved in DNA replication initiation + Term 105211 - 105246 2.1 - Term 104923 - 104958 1.6 92 55 Tu 1 . - CDS 105127 - 106038 955 ## COG5464 Uncharacterized conserved protein - Term 106128 - 106159 5.5 93 56 Op 1 6/0.092 - CDS 106167 - 106526 501 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 94 56 Op 2 . - CDS 106536 - 107999 1898 ## COG4783 Putative Zn-dependent protease, contains TPR repeats - Prom 108068 - 108127 3.2 95 57 Tu 1 . + CDS 108222 - 109286 1771 ## COG0628 Predicted permease + Term 109305 - 109350 11.1 - Term 109291 - 109336 11.1 96 58 Op 1 4/0.265 - CDS 109347 - 109817 614 ## COG1225 Peroxiredoxin 97 58 Op 2 . - CDS 109821 - 110387 248 ## COG2716 Glycine cleavage system regulatory protein - Prom 110416 - 110475 6.2 + Prom 110368 - 110427 3.4 98 59 Op 1 9/0.037 + CDS 110577 - 111419 796 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 99 59 Op 2 1/0.538 + CDS 111436 - 112470 1176 ## COG3317 Uncharacterized lipoprotein + Term 112477 - 112508 3.2 100 60 Tu 1 . + CDS 112687 - 113400 1122 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 113410 - 113449 10.0 + Prom 113431 - 113490 1.8 101 61 Op 1 4/0.265 + CDS 113520 - 114395 1195 ## COG2321 Predicted metalloprotease 102 61 Op 2 . + CDS 114405 - 116408 1714 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase 103 61 Op 3 . + CDS 116485 - 117180 877 ## COG0400 Predicted esterase + Term 117309 - 117369 1.2 - Term 117163 - 117201 8.5 104 62 Op 1 . - CDS 117229 - 117432 352 ## Kvar_1249 cytochrome 105 62 Op 2 9/0.037 - CDS 117459 - 118586 1373 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 106 62 Op 3 3/0.346 - CDS 118590 - 118943 488 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 119027 - 119086 5.1 - Term 119425 - 119457 3.0 107 63 Tu 1 . - CDS 119496 - 122609 3954 ## COG0841 Cation/multidrug efflux pump - Prom 122650 - 122709 4.1 108 64 Op 1 3/0.346 + CDS 122982 - 124964 2016 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 109 64 Op 2 . + CDS 125023 - 125619 724 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 125625 - 125671 1.2 110 65 Tu 1 . + CDS 125683 - 126729 910 ## Kvar_1255 hypothetical protein 111 66 Op 1 13/0.016 - CDS 126719 - 128713 2574 ## COG0021 Transketolase 112 66 Op 2 . - CDS 128730 - 129686 1410 ## COG0176 Transaldolase - Prom 129832 - 129891 4.2 + Prom 129760 - 129819 3.0 113 67 Tu 1 . + CDS 129981 - 132260 3402 ## COG0281 Malic enzyme + Term 132311 - 132357 8.0 + Prom 132315 - 132374 4.2 114 68 Op 1 4/0.265 + CDS 132479 - 132814 443 ## COG4810 Ethanolamine utilization protein 115 68 Op 2 4/0.265 + CDS 132827 - 133306 418 ## COG4917 Ethanolamine utilization protein 116 68 Op 3 4/0.265 + CDS 133284 - 133973 888 ## COG4766 Ethanolamine utilization protein 117 68 Op 4 4/0.265 + CDS 133970 - 134779 831 ## COG4812 Ethanolamine utilization cobalamin adenosyltransferase 118 68 Op 5 1/0.538 + CDS 134769 - 135785 983 ## COG0280 Phosphotransacetylase 119 68 Op 6 4/0.265 + CDS 135824 - 136114 449 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein + Term 136160 - 136220 7.1 120 69 Op 1 4/0.265 + CDS 136243 - 136530 264 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 121 69 Op 2 4/0.265 + CDS 136542 - 137945 853 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 122 69 Op 3 2/0.421 + CDS 137955 - 138794 737 ## COG4820 Ethanolamine utilization protein, possible chaperonin 123 69 Op 4 2/0.421 + CDS 138784 - 139971 1515 ## COG1454 Alcohol dehydrogenase, class IV 124 70 Op 1 4/0.265 + CDS 140171 - 141403 1884 ## COG3192 Ethanolamine utilization protein 125 70 Op 2 5/0.153 + CDS 141400 - 142803 1592 ## COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition 126 70 Op 3 8/0.039 + CDS 142815 - 144176 2051 ## COG4303 Ethanolamine ammonia-lyase, large subunit 127 70 Op 4 6/0.092 + CDS 144197 - 145099 1116 ## COG4302 Ethanolamine ammonia-lyase, small subunit 128 70 Op 5 4/0.265 + CDS 145109 - 145768 482 ## COG4816 Ethanolamine utilization protein 129 70 Op 6 2/0.421 + CDS 145780 - 146265 264 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 130 70 Op 7 . + CDS 146311 - 147363 1167 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 147311 - 147345 2.5 131 71 Op 1 4/0.265 - CDS 147407 - 148306 1031 ## COG0408 Coproporphyrinogen III oxidase 132 71 Op 2 . - CDS 148306 - 149178 1140 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 149251 - 149310 4.4 + Prom 149245 - 149304 4.3 133 72 Op 1 . + CDS 149390 - 149815 670 ## COG0456 Acetyltransferases 134 72 Op 2 . + CDS 149802 - 150251 484 ## KPN_02776 hypothetical protein 135 72 Op 3 . + CDS 150313 - 150888 768 ## Kvar_1280 hypothetical protein 136 72 Op 4 . + CDS 150983 - 151882 1208 ## COG2837 Predicted iron-dependent peroxidase + Term 151929 - 151972 1.4 + Prom 152444 - 152503 3.9 137 73 Op 1 7/0.057 + CDS 152541 - 153557 1581 ## COG4150 ABC-type sulfate transport system, periplasmic component 138 73 Op 2 17/0.000 + CDS 153566 - 154390 1228 ## COG0555 ABC-type sulfate transport system, permease component 139 73 Op 3 17/0.000 + CDS 154390 - 155265 1292 ## COG4208 ABC-type sulfate transport system, permease component 140 73 Op 4 5/0.153 + CDS 155255 - 156349 1700 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component + Prom 156380 - 156439 3.3 141 74 Tu 1 . + CDS 156459 - 157379 555 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 142 75 Tu 1 . - CDS 157376 - 157771 569 ## COG4319 Ketosteroid isomerase homolog - Prom 157876 - 157935 2.2 143 76 Tu 1 . - CDS 157953 - 159251 1219 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 159283 - 159342 2.9 + Prom 159230 - 159289 2.9 144 77 Op 1 . + CDS 159334 - 160197 970 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 145 77 Op 2 . + CDS 160197 - 160436 268 ## Kvar_1291 hypothetical protein + Term 160442 - 160472 3.0 - Term 160429 - 160459 3.0 146 78 Op 1 10/0.030 - CDS 160477 - 160986 825 ## COG2190 Phosphotransferase system IIA components 147 78 Op 2 25/0.000 - CDS 161029 - 162756 2143 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 148 78 Op 3 6/0.092 - CDS 162801 - 163058 399 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 163219 - 163278 6.2 - Term 163363 - 163424 2.5 149 79 Tu 1 8/0.039 - CDS 163439 - 164410 705 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 164444 - 164503 3.5 - Term 164535 - 164567 5.0 150 80 Tu 1 . - CDS 164587 - 165222 811 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis - Prom 165406 - 165465 3.0 + Prom 165323 - 165382 5.4 151 81 Tu 1 . + CDS 165582 - 166127 442 ## COG3115 Cell division protein + Prom 166129 - 166188 80.3 152 82 Op 1 7/0.057 + CDS 166417 - 166818 614 ## COG3115 Cell division protein + Term 166848 - 166876 1.3 153 82 Op 2 3/0.346 + CDS 166888 - 168903 2331 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 154 82 Op 3 . + CDS 168905 - 169123 319 ## COG3530 Uncharacterized protein conserved in bacteria + Term 169278 - 169315 3.1 - Term 169066 - 169108 3.4 155 83 Tu 1 . - CDS 169120 - 170118 1218 ## COG0385 Predicted Na+-dependent transporter - Prom 170152 - 170211 6.0 + Prom 170122 - 170181 4.2 156 84 Tu 1 . + CDS 170207 - 171133 930 ## COG0583 Transcriptional regulator + Term 171191 - 171219 2.1 - TRNA 171217 - 171292 99.5 # Lys TTT 0 0 - TRNA 171297 - 171372 94.3 # Val TAC 0 0 - TRNA 171419 - 171494 94.3 # Val TAC 0 0 - TRNA 171540 - 171615 94.3 # Val TAC 0 0 + Prom 171645 - 171704 4.6 157 85 Tu 1 . + CDS 171875 - 173293 1767 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 173307 - 173350 6.7 - Term 173300 - 173332 3.0 158 86 Op 1 . - CDS 173346 - 173717 214 ## KPK_1390 hypothetical protein 159 86 Op 2 . - CDS 173742 - 174095 344 ## Kvar_1304 hypothetical protein - Prom 174127 - 174186 2.0 + TRNA 174315 - 174390 86.5 # Ala GGC 0 0 + TRNA 174432 - 174507 86.5 # Ala GGC 0 0 + Prom 174617 - 174676 5.5 160 87 Tu 1 . + CDS 174717 - 176888 1743 ## COG2200 FOG: EAL domain - Term 176887 - 176917 4.1 161 88 Tu 1 . - CDS 176936 - 178138 1760 ## COG1972 Nucleoside permease + Prom 178418 - 178477 4.8 162 89 Tu 1 . + CDS 178548 - 179726 1508 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 179749 - 179791 7.5 - Term 179741 - 179773 5.0 163 90 Tu 1 . - CDS 179784 - 180137 181 ## Ent638_2925 hypothetical protein - Term 180192 - 180231 -0.7 164 91 Tu 1 . - CDS 180268 - 181224 1041 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 181422 - 181481 3.8 + Prom 181250 - 181309 2.2 165 92 Tu 1 . + CDS 181441 - 183102 1671 ## COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes 166 93 Tu 1 . - CDS 183099 - 184334 1623 ## COG0038 Chloride channel protein EriC - Prom 184569 - 184628 5.3 + Prom 184302 - 184361 2.6 167 94 Tu 1 . + CDS 184598 - 185563 1189 ## COG0837 Glucokinase 168 95 Op 1 9/0.037 - CDS 185616 - 186353 796 ## COG3279 Response regulator of the LytR/AlgR family 169 95 Op 2 . - CDS 186365 - 188044 1877 ## COG3275 Putative regulator of cell autolysis - Prom 188087 - 188146 5.9 170 96 Tu 1 . + CDS 188446 - 189660 1381 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 189689 - 189721 5.0 171 97 Op 1 1/0.538 - CDS 190141 - 191328 1085 ## COG2807 Cyanate permease 172 97 Op 2 . - CDS 191334 - 191792 332 ## COG0590 Cytosine/adenosine deaminases - Prom 191881 - 191940 2.4 + Prom 191840 - 191899 3.2 173 98 Tu 1 . + CDS 191925 - 192866 983 ## COG0583 Transcriptional regulator + Term 192899 - 192943 1.3 - Term 192805 - 192839 2.7 174 99 Tu 1 . - CDS 192863 - 193675 610 ## KPK_1407 hypothetical protein - Prom 193899 - 193958 4.3 175 100 Tu 1 . - CDS 194099 - 194581 412 ## KPK_1409 hypothetical protein - Prom 194651 - 194710 2.7 - TRNA 194831 - 194905 73.2 # Arg CCT 0 0 176 101 Tu 1 . - CDS 194995 - 195924 907 ## COG2116 Formate/nitrite family of transporters - Prom 196003 - 196062 1.9 + Prom 195992 - 196051 4.1 177 102 Tu 1 . + CDS 196214 - 196975 952 ## COG2853 Surface lipoprotein + Term 196995 - 197028 5.1 - Term 196982 - 197015 5.1 178 103 Tu 1 . - CDS 197037 - 198359 1648 ## COG2067 Long-chain fatty acid transport protein - Prom 198461 - 198520 4.7 179 104 Tu 1 . + CDS 198733 - 199017 394 ## COG3691 Uncharacterized protein conserved in bacteria + Term 199028 - 199063 5.0 + Prom 199074 - 199133 3.1 180 105 Op 1 20/0.000 + CDS 199175 - 200485 1400 ## COG0183 Acetyl-CoA acetyltransferase 181 105 Op 2 5/0.153 + CDS 200485 - 202629 2041 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Prom 202674 - 202733 5.4 182 106 Tu 1 . + CDS 202854 - 203324 464 ## COG2062 Phosphohistidine phosphatase SixA + Term 203393 - 203424 3.2 183 107 Tu 1 . - CDS 203343 - 203894 690 ## COG2840 Uncharacterized protein conserved in bacteria - Prom 203915 - 203974 4.0 184 108 Op 1 3/0.346 + CDS 203990 - 204994 1523 ## PROTEIN SUPPORTED gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase 185 108 Op 2 7/0.057 + CDS 205036 - 206121 1410 ## COG0082 Chorismate synthase 186 108 Op 3 7/0.057 + CDS 206124 - 206948 675 ## COG3770 Murein endopeptidase 187 108 Op 4 5/0.153 + CDS 206948 - 207757 802 ## COG0730 Predicted permeases 188 108 Op 5 . + CDS 207757 - 208305 489 ## COG3101 Uncharacterized protein conserved in bacteria 189 108 Op 6 . + CDS 208337 - 208618 438 ## Kvar_1334 YfcL protein - Term 208599 - 208642 0.3 190 109 Tu 1 . - CDS 208680 - 210668 1650 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 210693 - 210752 3.1 + Prom 210732 - 210791 4.9 191 110 Tu 1 . + CDS 210827 - 212047 1224 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 212065 - 212099 6.7 + Prom 212074 - 212133 3.8 192 111 Tu 1 . + CDS 212257 - 213438 1483 ## COG0477 Permeases of the major facilitator superfamily 193 112 Tu 1 . - CDS 213440 - 214177 498 ## COG2188 Transcriptional regulators - Prom 214307 - 214366 7.0 + Prom 214115 - 214174 6.4 194 113 Tu 1 10/0.030 + CDS 214373 - 214687 266 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 214702 - 214761 2.4 195 114 Op 1 13/0.016 + CDS 214796 - 216142 1613 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 196 114 Op 2 . + CDS 216129 - 216440 198 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 197 114 Op 3 . + CDS 216501 - 218174 1735 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Term 218194 - 218226 5.3 198 115 Tu 1 . - CDS 218233 - 219213 796 ## Kvar_1343 flagella biosynthesis regulator protein - Prom 219338 - 219397 2.0 199 116 Op 1 5/0.153 + CDS 219324 - 220460 1208 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 220475 - 220511 8.7 200 116 Op 2 5/0.153 + CDS 220524 - 221537 1430 ## COG0136 Aspartate-semialdehyde dehydrogenase 201 116 Op 3 5/0.153 + CDS 221537 - 222349 678 ## COG0101 Pseudouridylate synthase 202 116 Op 4 5/0.153 + CDS 222376 - 223035 907 ## COG0586 Uncharacterized membrane-associated protein + Prom 223070 - 223129 4.9 203 117 Op 1 15/0.014 + CDS 223222 - 224142 1053 ## COG0777 Acetyl-CoA carboxylase beta subunit + Term 224150 - 224189 5.1 204 117 Op 2 7/0.057 + CDS 224218 - 225486 1345 ## COG0285 Folylpolyglutamate synthase 205 117 Op 3 7/0.057 + CDS 225476 - 226171 720 ## COG3147 Uncharacterized protein conserved in bacteria + Term 226261 - 226300 5.1 + Prom 226294 - 226353 4.8 206 118 Op 1 18/0.000 + CDS 226388 - 226876 441 ## COG1286 Uncharacterized membrane protein, required for colicin V production 207 118 Op 2 5/0.153 + CDS 226910 - 228427 1929 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Term 228444 - 228484 9.0 + Prom 228469 - 228528 3.5 208 119 Tu 1 . + CDS 228562 - 229146 653 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase + Term 229164 - 229194 1.1 + Prom 229246 - 229305 4.0 209 120 Tu 1 9/0.037 + CDS 229419 - 230201 1086 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 230359 - 230418 1.9 210 121 Op 1 12/0.016 + CDS 230469 - 231251 1233 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 211 121 Op 2 12/0.016 + CDS 231316 - 232002 950 ## COG4215 ABC-type arginine transport system, permease component 212 121 Op 3 6/0.092 + CDS 231999 - 232715 802 ## COG4160 ABC-type arginine/histidine transport system, permease component 213 121 Op 4 . + CDS 232723 - 233496 249 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Term 233409 - 233459 5.0 214 122 Tu 1 . - CDS 233502 - 234029 543 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - Term 234200 - 234242 2.8 215 123 Op 1 3/0.346 - CDS 234248 - 235141 681 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 216 123 Op 2 3/0.346 - CDS 235160 - 235522 498 ## COG1539 Dihydroneopterin aldolase 217 123 Op 3 . - CDS 235588 - 236217 810 ## COG0625 Glutathione S-transferase - Prom 236246 - 236305 3.1 + Prom 236320 - 236379 2.2 218 124 Op 1 2/0.421 + CDS 236408 - 237052 742 ## COG0625 Glutathione S-transferase 219 124 Op 2 3/0.346 + CDS 237109 - 237660 485 ## COG0622 Predicted phosphoesterase 220 124 Op 3 . + CDS 237718 - 238263 619 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 238312 - 238342 3.0 - Term 238299 - 238329 3.0 221 125 Tu 1 . - CDS 238354 - 240501 2600 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase 222 126 Tu 1 . - CDS 240702 - 241904 1516 ## COG0282 Acetate kinase 223 127 Op 1 2/0.421 + CDS 242243 - 242698 632 ## COG3092 Uncharacterized protein conserved in bacteria + Term 242724 - 242760 7.3 224 127 Op 2 . + CDS 242786 - 243280 732 ## COG3013 Uncharacterized conserved protein 225 127 Op 3 2/0.421 + CDS 243292 - 243951 685 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 243964 - 243993 1.1 226 128 Tu 1 . + CDS 244028 - 245860 2084 ## COG0471 Di- and tricarboxylate transporters 227 129 Op 1 6/0.092 - CDS 245906 - 246505 797 ## COG1896 Predicted hydrolases of HD superfamily 228 129 Op 2 . - CDS 246587 - 247804 1519 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 247900 - 247959 2.8 + Prom 248506 - 248565 1.7 229 130 Tu 1 . + CDS 248681 - 249607 786 ## COG0583 Transcriptional regulator + Term 249666 - 249711 4.0 + Prom 250039 - 250098 7.0 230 131 Op 1 30/0.000 + CDS 250264 - 250704 311 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) 231 131 Op 2 9/0.037 + CDS 250720 - 251394 859 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 232 131 Op 3 15/0.014 + CDS 251494 - 253290 2469 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 233 131 Op 4 23/0.000 + CDS 253293 - 253793 529 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 234 131 Op 5 12/0.016 + CDS 253790 - 255127 1678 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 235 131 Op 6 18/0.000 + CDS 255159 - 257885 3363 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 236 131 Op 7 31/0.000 + CDS 257882 - 258859 1329 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 237 131 Op 8 28/0.000 + CDS 258874 - 259416 819 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 238 131 Op 9 30/0.000 + CDS 259427 - 259981 859 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 239 131 Op 10 26/0.000 + CDS 259978 - 260280 447 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 240 131 Op 11 30/0.000 + CDS 260277 - 262118 2620 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 241 131 Op 12 22/0.000 + CDS 262420 - 263949 2258 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 242 131 Op 13 . + CDS 263956 - 265413 2243 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 265417 - 265474 4.2 - Term 265415 - 265456 5.6 243 132 Tu 1 . - CDS 265467 - 266387 1088 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - Prom 266438 - 266497 3.5 + Prom 266272 - 266331 2.0 244 133 Tu 1 . + CDS 266445 - 266906 483 ## COG2153 Predicted acyltransferase + Prom 266910 - 266969 1.9 245 134 Tu 1 10/0.030 + CDS 267030 - 268331 1124 ## COG1169 Isochorismate synthase + Term 268335 - 268384 2.0 + Prom 268335 - 268394 2.6 246 135 Op 1 15/0.014 + CDS 268414 - 270084 2082 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 247 135 Op 2 9/0.037 + CDS 270081 - 270839 813 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 248 135 Op 3 5/0.153 + CDS 270854 - 271711 1256 ## COG0447 Dihydroxynaphthoic acid synthase 249 135 Op 4 6/0.092 + CDS 271711 - 272676 1122 ## COG1441 O-succinylbenzoate synthase 250 135 Op 5 . + CDS 272673 - 274049 879 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 251 136 Tu 1 . - CDS 274105 - 274530 455 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 274567 - 274626 1.6 + Prom 274444 - 274503 2.8 252 137 Tu 1 . + CDS 274668 - 275603 875 ## COG5464 Uncharacterized conserved protein + Term 275628 - 275664 3.1 + Prom 275778 - 275837 4.9 253 138 Tu 1 . + CDS 275884 - 276426 859 ## KPK_1495 outer membrane protein, YfaZ + Term 276435 - 276471 5.0 + Prom 276446 - 276505 2.9 254 139 Tu 1 . + CDS 276529 - 277725 1566 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA + Prom 277849 - 277908 1.7 255 140 Op 1 5/0.153 + CDS 277931 - 278716 992 ## COG1414 Transcriptional regulator 256 140 Op 2 7/0.057 + CDS 278727 - 279932 1675 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 257 140 Op 3 6/0.092 + CDS 279975 - 281264 1799 ## COG0477 Permeases of the major facilitator superfamily 258 140 Op 4 . + CDS 281279 - 282082 984 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase - Term 282032 - 282069 -0.2 259 141 Op 1 8/0.039 - CDS 282111 - 283289 1334 ## COG0247 Fe-S oxidoreductase 260 141 Op 2 9/0.037 - CDS 283286 - 284545 1073 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 261 141 Op 3 . - CDS 284535 - 286157 1896 ## COG0578 Glycerol-3-phosphate dehydrogenase + Prom 286162 - 286221 2.9 262 142 Op 1 6/0.092 + CDS 286429 - 287775 1935 ## COG2271 Sugar phosphate permease 263 142 Op 2 . + CDS 287785 - 288852 1478 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 288860 - 288885 -0.5 - Term 288843 - 288878 5.1 264 143 Op 1 8/0.039 - CDS 288946 - 289200 217 ## COG0633 Ferredoxin 265 143 Op 2 24/0.000 - CDS 289200 - 290330 1809 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 290354 - 290413 3.7 266 143 Op 3 3/0.346 - CDS 290432 - 292717 3245 ## COG0209 Ribonucleotide reductase, alpha subunit - Term 292998 - 293042 8.1 267 144 Tu 1 . - CDS 293062 - 293790 951 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Prom 293818 - 293877 5.2 + Prom 293840 - 293899 6.1 268 145 Tu 1 . + CDS 293937 - 296570 3638 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 296595 - 296628 5.1 + Prom 296607 - 296666 1.5 269 146 Tu 1 . + CDS 296702 - 299542 3289 ## COG0642 Signal transduction histidine kinase 270 147 Op 1 12/0.016 - CDS 299588 - 300238 925 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 271 147 Op 2 . - CDS 300254 - 302911 2529 ## COG0642 Signal transduction histidine kinase + Prom 303399 - 303458 6.2 272 148 Tu 1 . + CDS 303683 - 304774 1566 ## COG3203 Outer membrane protein (porin) + Term 304791 - 304829 8.6 + Prom 304794 - 304853 6.3 273 149 Op 1 3/0.346 + CDS 304878 - 305930 1330 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 274 149 Op 2 4/0.265 + CDS 306004 - 307068 930 ## COG2169 Adenosine deaminase 275 149 Op 3 4/0.265 + CDS 307068 - 307721 775 ## COG3145 Alkylated DNA repair protein 276 150 Tu 1 . + CDS 307796 - 309439 182 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 309490 - 309522 -0.9 + Prom 309466 - 309525 3.2 277 151 Tu 1 . + CDS 309595 - 311031 1957 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 278 152 Tu 1 . - CDS 310994 - 312232 1352 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 312472 - 312531 5.3 + Prom 312357 - 312416 6.9 279 153 Tu 1 . + CDS 312513 - 314147 1985 ## COG0579 Predicted dehydrogenase + Term 314156 - 314210 11.2 - Term 314153 - 314185 5.0 280 154 Tu 1 . - CDS 314213 - 314704 629 ## COG4574 Serine protease inhibitor ecotin - Prom 314755 - 314814 3.8 281 155 Tu 1 . - CDS 314857 - 315966 1488 ## COG0628 Predicted permease - Prom 316075 - 316134 3.3 - Term 316262 - 316301 5.0 282 156 Op 1 . - CDS 316315 - 316503 243 ## Kvar_1427 hypothetical protein 283 156 Op 2 . - CDS 316574 - 316783 224 ## KPK_1527 hypothetical protein - Prom 316943 - 317002 6.9 + Prom 316947 - 317006 8.9 284 157 Op 1 34/0.000 + CDS 317117 - 317857 628 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 285 157 Op 2 17/0.000 + CDS 317866 - 318564 813 ## COG0765 ABC-type amino acid transport system, permease component 286 157 Op 3 31/0.000 + CDS 318574 - 319326 493 ## COG0765 ABC-type amino acid transport system, permease component 287 157 Op 4 . + CDS 319337 - 320158 987 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 288 157 Op 5 . + CDS 320163 - 320702 580 ## Kvar_1433 hypothetical protein 289 157 Op 6 . + CDS 320680 - 320886 90 ## 290 157 Op 7 . + CDS 320910 - 321698 863 ## COG0345 Pyrroline-5-carboxylate reductase + Term 321923 - 321959 -0.5 - TRNA 321995 - 322071 78.0 # Pro GGG 0 0 - Term 322078 - 322118 -0.9 291 158 Op 1 8/0.039 - CDS 322148 - 323908 2043 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily 292 158 Op 2 . - CDS 323927 - 324154 244 ## COG3082 Uncharacterized protein conserved in bacteria - Prom 324326 - 324385 4.3 + Prom 324260 - 324319 2.1 293 159 Tu 1 . + CDS 324341 - 325348 1620 ## COG3081 Nucleoid-associated protein - Term 325279 - 325335 -1.0 294 160 Tu 1 . - CDS 325368 - 326129 699 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 326277 - 326336 4.5 + Prom 326129 - 326188 3.4 295 161 Tu 1 . + CDS 326211 - 326807 815 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 296 162 Tu 1 . - CDS 326828 - 328114 1553 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Prom 328142 - 328201 3.5 + Prom 328104 - 328163 7.3 297 163 Tu 1 . + CDS 328218 - 329105 845 ## COG0583 Transcriptional regulator - Term 329099 - 329137 6.4 298 164 Tu 1 . - CDS 329164 - 329448 481 ## PROTEIN SUPPORTED gi|206577853|ref|YP_002237395.1| ribosomal L25p family - Prom 329522 - 329581 5.0 - Term 329514 - 329544 1.3 299 165 Tu 1 . - CDS 329585 - 331342 2040 ## COG1061 DNA or RNA helicases of superfamily II - Prom 331494 - 331553 4.4 + Prom 331369 - 331428 6.4 300 166 Op 1 8/0.039 + CDS 331489 - 332208 944 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 301 166 Op 2 . + CDS 332205 - 333401 1567 ## COG0477 Permeases of the major facilitator superfamily + Term 333414 - 333441 1.5 + Prom 333442 - 333501 5.5 302 167 Tu 1 . + CDS 333732 - 334076 382 ## Kvar_1446 hypothetical protein + Term 334264 - 334305 -0.1 - Term 334018 - 334070 0.0 303 168 Op 1 11/0.023 - CDS 334080 - 335669 301 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 304 168 Op 2 11/0.023 - CDS 335671 - 336696 1246 ## COG4239 ABC-type uncharacterized transport system, permease component 305 168 Op 3 11/0.023 - CDS 336696 - 337790 1804 ## COG4174 ABC-type uncharacterized transport system, permease component 306 168 Op 4 2/0.421 - CDS 337800 - 339605 1866 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 307 168 Op 5 5/0.153 - CDS 339674 - 341236 1564 ## COG2200 FOG: EAL domain - Prom 341314 - 341373 6.6 - Term 341345 - 341372 0.1 308 169 Tu 1 . - CDS 341425 - 341994 357 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 342164 - 342223 5.3 - Term 342356 - 342386 3.4 309 170 Op 1 3/0.346 - CDS 342421 - 343128 705 ## COG0671 Membrane-associated phospholipid phosphatase 310 170 Op 2 3/0.346 - CDS 343172 - 344149 774 ## COG0523 Putative GTPases (G3E family) - Prom 344185 - 344244 2.4 - Term 344210 - 344258 4.7 311 171 Tu 1 . - CDS 344270 - 345736 1713 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 345767 - 345826 5.2 + Prom 345731 - 345790 3.7 312 172 Tu 1 . + CDS 345944 - 347134 1503 ## COG1312 D-mannonate dehydratase + Term 347158 - 347190 6.3 - Term 347856 - 347888 6.3 313 173 Tu 1 . - CDS 347916 - 348488 824 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 348523 - 348582 2.1 + Prom 348418 - 348477 3.6 314 174 Tu 1 . + CDS 348702 - 348890 192 ## COG0727 Predicted Fe-S-cluster oxidoreductase 315 175 Tu 1 . - CDS 348893 - 349807 1007 ## COG0583 Transcriptional regulator - Prom 349853 - 349912 5.2 + Prom 349865 - 349924 2.2 316 176 Tu 1 . + CDS 350039 - 350383 211 ## Kvar_1460 hypothetical protein + Prom 350388 - 350447 4.5 317 177 Tu 1 . + CDS 350523 - 351521 1369 ## COG1566 Multidrug resistance efflux pump + Term 351529 - 351561 4.1 - Term 351510 - 351554 3.1 318 178 Tu 1 . - CDS 351556 - 352737 1497 ## COG0477 Permeases of the major facilitator superfamily - Prom 352796 - 352855 7.0 + Prom 352786 - 352845 4.6 319 179 Op 1 11/0.023 + CDS 353072 - 354202 1613 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 320 179 Op 2 19/0.000 + CDS 354203 - 355141 1231 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 321 179 Op 3 . + CDS 355158 - 356852 2508 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 356861 - 356910 7.1 - Term 356858 - 356888 3.0 322 180 Op 1 5/0.153 - CDS 356905 - 357759 1157 ## COG0648 Endonuclease IV 323 180 Op 2 . - CDS 357831 - 358880 1517 ## COG2855 Predicted membrane protein - Prom 358917 - 358976 6.1 + Prom 358900 - 358959 5.1 324 181 Tu 1 . + CDS 359146 - 360012 928 ## COG0583 Transcriptional regulator + Prom 360103 - 360162 3.7 325 182 Tu 1 . + CDS 360190 - 361659 2075 ## COG0833 Amino acid transporters + Term 361682 - 361711 2.1 - Term 361670 - 361699 2.1 326 183 Tu 1 . - CDS 361775 - 362227 -205 ## - Prom 362411 - 362470 3.1 327 184 Tu 1 . + CDS 362395 - 363933 2067 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Term 363939 - 363982 1.2 328 185 Tu 1 . - CDS 364004 - 364837 902 ## COG0627 Predicted esterase - Prom 364868 - 364927 2.6 + Prom 364890 - 364949 2.6 329 186 Op 1 4/0.265 + CDS 365198 - 365866 936 ## COG0302 GTP cyclohydrolase I 330 186 Op 2 4/0.265 + CDS 365882 - 367039 1449 ## COG2311 Predicted membrane protein 331 187 Tu 1 . + CDS 367195 - 368217 1477 ## COG1609 Transcriptional regulators + Term 368316 - 368351 1.3 + Prom 368238 - 368297 4.9 332 188 Op 1 16/0.000 + CDS 368514 - 369512 1472 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 369528 - 369562 8.3 333 188 Op 2 10/0.030 + CDS 369631 - 371151 195 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 334 188 Op 3 . + CDS 371167 - 372177 1693 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 372189 - 372232 11.1 - Term 372182 - 372212 4.1 335 189 Tu 1 . - CDS 372219 - 372455 290 ## COG1396 Predicted transcriptional regulators 336 190 Tu 1 . - CDS 372662 - 372934 82 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes - Prom 373097 - 373156 2.3 337 191 Tu 1 . - CDS 373245 - 373766 275 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes - Prom 373789 - 373848 5.5 338 192 Tu 1 . - CDS 373881 - 374612 1073 ## COG2949 Uncharacterized membrane protein - Prom 374644 - 374703 2.1 - Term 374828 - 374874 2.1 339 193 Tu 1 . - CDS 374889 - 375773 1080 ## COG0295 Cytidine deaminase - Prom 375833 - 375892 1.9 340 194 Op 1 23/0.000 - CDS 375902 - 376597 971 ## COG1346 Putative effector of murein hydrolase 341 194 Op 2 . - CDS 376587 - 376991 500 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 377012 - 377071 3.6 342 195 Tu 1 . + CDS 377350 - 378282 303 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase + Term 378405 - 378455 12.5 + Prom 378409 - 378468 6.5 343 196 Tu 1 . + CDS 378639 - 380003 1821 ## COG3659 Carbohydrate-selective porin + Term 380096 - 380157 15.4 + Prom 380016 - 380075 2.7 344 197 Tu 1 . + CDS 380159 - 380992 1035 ## COG3711 Transcriptional antiterminator + Term 381031 - 381088 6.3 + Prom 381030 - 381089 4.5 345 198 Op 1 8/0.039 + CDS 381134 - 382996 2440 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 346 198 Op 2 . + CDS 383012 - 384406 2048 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 347 199 Tu 1 . - CDS 384440 - 385174 688 ## PROTEIN SUPPORTED gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase - Prom 385305 - 385364 3.8 + Prom 385157 - 385216 4.7 348 200 Tu 1 . + CDS 385327 - 386742 1700 ## COG1538 Outer membrane protein + Term 386752 - 386785 3.3 - Term 386732 - 386760 0.1 349 201 Tu 1 . - CDS 386775 - 387344 840 ## COG0586 Uncharacterized membrane-associated protein - Prom 387444 - 387503 5.3 + Prom 387406 - 387465 2.8 350 202 Tu 1 . + CDS 387498 - 388085 776 ## Kvar_1492 hypothetical protein + Term 388106 - 388157 9.6 + Prom 388175 - 388234 2.3 351 203 Tu 1 . + CDS 388277 - 389224 1343 ## COG1686 D-alanyl-D-alanine carboxypeptidase 352 204 Op 1 . - CDS 389584 - 390138 832 ## COG1247 Sortase and related acyltransferases 353 204 Op 2 . - CDS 390224 - 391969 2410 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 392068 - 392127 4.8 + Prom 392072 - 392131 6.1 354 205 Tu 1 . + CDS 392164 - 394461 3383 ## COG1472 Beta-glucosidase-related glycosidases + Term 394490 - 394527 2.3 + Prom 394495 - 394554 4.0 355 206 Op 1 13/0.016 + CDS 394598 - 395515 1400 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 356 206 Op 2 24/0.000 + CDS 395523 - 396680 1481 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 357 206 Op 3 24/0.000 + CDS 396673 - 397620 1389 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 358 206 Op 4 . + CDS 397604 - 398341 1010 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component + Term 398436 - 398468 -1.0 + Prom 398380 - 398439 3.6 359 207 Op 1 9/0.037 + CDS 398659 - 400347 2404 ## COG3275 Putative regulator of cell autolysis 360 207 Op 2 2/0.421 + CDS 400341 - 401060 1114 ## COG3279 Response regulator of the LytR/AlgR family 361 207 Op 3 . + CDS 401108 - 401578 620 ## COG4807 Uncharacterized protein conserved in bacteria + Term 401652 - 401702 9.3 - Term 401651 - 401681 4.3 362 208 Tu 1 . - CDS 401689 - 403722 2898 ## COG0143 Methionyl-tRNA synthetase - Prom 403754 - 403813 4.7 + Prom 403781 - 403840 3.2 363 209 Tu 1 . + CDS 403876 - 404985 1478 ## COG0489 ATPases involved in chromosome partitioning + Term 405028 - 405091 10.0 - Term 404778 - 404811 1.4 364 210 Op 1 . - CDS 404982 - 405443 289 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 365 210 Op 2 . - CDS 405418 - 405735 497 ## COG5455 Predicted integral membrane protein - Prom 405770 - 405829 4.3 + Prom 405697 - 405756 3.7 366 211 Tu 1 . + CDS 405919 - 406818 1332 ## COG0583 Transcriptional regulator 367 212 Op 1 1/0.538 - CDS 406808 - 408151 2077 ## COG2252 Permeases 368 212 Op 2 . - CDS 408154 - 409965 1953 ## COG1001 Adenine deaminase + Prom 410010 - 410069 1.7 369 213 Tu 1 . + CDS 410089 - 411012 1136 ## COG0583 Transcriptional regulator - Term 411036 - 411078 6.0 370 214 Tu 1 . - CDS 411095 - 413071 2554 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 413095 - 413154 2.4 + Prom 413100 - 413159 2.9 371 215 Tu 1 . + CDS 413275 - 413910 407 ## Kvar_1514 Crp/Fnr family transcriptional regulator + Term 413933 - 413959 -0.7 - Term 413921 - 413947 -0.7 372 216 Tu 1 . - CDS 413978 - 415954 2971 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 416074 - 416133 5.1 + Prom 416036 - 416095 5.0 373 217 Tu 1 . + CDS 416317 - 416607 382 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family + Prom 416909 - 416968 80.3 374 218 Op 1 12/0.016 + CDS 417042 - 417242 305 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 375 218 Op 2 . + CDS 417239 - 418039 1210 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Prom 418098 - 418157 2.0 376 219 Tu 1 . + CDS 418187 - 419239 1374 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes + Term 419322 - 419362 1.1 377 220 Tu 1 . - CDS 419321 - 420262 1149 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 420367 - 420426 3.6 + Prom 420367 - 420426 3.8 378 221 Op 1 2/0.421 + CDS 420469 - 421836 1997 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 379 221 Op 2 6/0.092 + CDS 421847 - 423310 1959 ## COG1070 Sugar (pentulose and hexulose) kinases 380 221 Op 3 1/0.538 + CDS 423381 - 424658 1771 ## COG0477 Permeases of the major facilitator superfamily 381 221 Op 4 . + CDS 424707 - 425369 733 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 425380 - 425452 10.1 + Prom 425554 - 425613 4.1 382 222 Tu 1 . + CDS 425667 - 426821 1484 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 383 223 Op 1 38/0.000 + CDS 426992 - 428563 1987 ## COG0747 ABC-type dipeptide transport system, periplasmic component 384 223 Op 2 49/0.000 + CDS 428560 - 429597 349 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 385 223 Op 3 44/0.000 + CDS 429594 - 430499 1097 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 386 223 Op 4 17/0.000 + CDS 430462 - 431334 442 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 387 223 Op 5 . + CDS 431345 - 432118 374 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 432126 - 432164 4.1 - Term 432292 - 432336 6.0 388 224 Tu 1 . - CDS 432358 - 433254 1145 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 433342 - 433401 3.6 - Term 433324 - 433361 5.4 389 225 Tu 1 . - CDS 433497 - 434858 2019 ## COG0826 Collagenase and related proteases - Prom 434933 - 434992 4.5 390 226 Op 1 40/0.000 - CDS 435177 - 435899 1003 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 391 226 Op 2 10/0.030 - CDS 435896 - 437398 1729 ## COG0642 Signal transduction histidine kinase 392 226 Op 3 5/0.153 - CDS 437395 - 438810 2103 ## COG0477 Permeases of the major facilitator superfamily 393 226 Op 4 10/0.030 - CDS 438812 - 441889 4319 ## COG0841 Cation/multidrug efflux pump 394 226 Op 5 27/0.000 - CDS 441890 - 445012 4661 ## COG0841 Cation/multidrug efflux pump 395 226 Op 6 . - CDS 445012 - 446070 1341 ## COG0845 Membrane-fusion protein - Prom 446241 - 446300 80.3 396 227 Tu 1 . - CDS 446302 - 446475 158 ## Kvar_1537 efflux transporter RND family, MFP subunit - Prom 446715 - 446774 5.3 + Prom 446671 - 446730 6.7 397 228 Tu 1 . + CDS 446818 - 448050 1899 ## COG1301 Na+/H+-dicarboxylate symporters - Term 448088 - 448121 4.5 398 229 Tu 1 . - CDS 448325 - 448936 653 ## KPK_1641 hypothetical protein - Prom 449032 - 449091 10.7 - Term 449160 - 449191 -0.7 399 230 Op 1 16/0.000 - CDS 449430 - 450131 860 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 400 230 Op 2 . - CDS 450146 - 452002 2184 ## COG2205 Osmosensitive K+ channel histidine kinase 401 231 Tu 1 . - CDS 452292 - 453644 1635 ## COG0443 Molecular chaperone - Prom 453676 - 453735 3.6 402 232 Tu 1 . + CDS 453782 - 454465 792 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 403 233 Tu 1 . + CDS 454842 - 454988 87 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 404 234 Op 1 4/0.265 + CDS 455103 - 455744 845 ## COG0572 Uridine kinase 405 234 Op 2 4/0.265 + CDS 455835 - 456416 839 ## COG0717 Deoxycytidine deaminase 406 234 Op 3 . + CDS 456471 - 458294 2475 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 458305 - 458343 7.3 407 235 Tu 1 . - CDS 458870 - 460453 2163 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 460608 - 460667 3.9 + Prom 461133 - 461192 4.7 408 236 Tu 1 . + CDS 461230 - 462120 1196 ## COG1210 UDP-glucose pyrophosphorylase + Prom 462353 - 462412 5.4 409 237 Tu 1 . + CDS 462514 - 463143 428 ## Kvar_1549 phosphoesterase PA-phosphatase related protein + Prom 463871 - 463930 3.5 410 238 Tu 1 . + CDS 464101 - 465534 1034 ## Kvar_1550 hypothetical protein + Prom 465695 - 465754 3.1 411 239 Tu 1 . + CDS 465842 - 466816 -110 ## COG1596 Periplasmic protein involved in polysaccharide export + Prom 468667 - 468726 7.8 412 240 Tu 1 . + CDS 468964 - 469440 -146 ## COG0489 ATPases involved in chromosome partitioning + Term 469466 - 469500 3.6 + Prom 469864 - 469923 3.0 413 241 Tu 1 . + CDS 470053 - 470739 201 ## COG0438 Glycosyltransferase + Prom 471249 - 471308 8.9 414 242 Tu 1 . + CDS 471401 - 471895 -42 ## GM18_0988 group 1 glycosyl transferase + Term 472033 - 472093 3.2 + Prom 472434 - 472493 7.2 415 243 Tu 1 . + CDS 472632 - 473162 -219 ## gi|290508638|ref|ZP_06548009.1| serotype K2 polymerase + Prom 473357 - 473416 6.1 416 244 Tu 1 . + CDS 473621 - 474238 44 ## COG0438 Glycosyltransferase + Term 474312 - 474354 1.1 + Prom 475135 - 475194 1.8 417 245 Tu 1 . + CDS 475253 - 475726 -6 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 475841 - 475883 -1.0 + Prom 476147 - 476206 7.7 418 246 Op 1 2/0.421 + CDS 476296 - 476685 72 ## COG5039 Exopolysaccharide biosynthesis protein 419 246 Op 2 . + CDS 476745 - 477728 -313 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 477918 - 477978 0.5 + Prom 478868 - 478927 3.7 420 247 Tu 1 . + CDS 479014 - 479508 -234 ## gi|290508643|ref|ZP_06548014.1| conserved hypothetical protein + Prom 480581 - 480640 3.6 421 248 Tu 1 . + CDS 480710 - 481294 -204 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Prom 481346 - 481405 4.6 422 249 Tu 1 . + CDS 481457 - 482863 1525 ## COG0362 6-phosphogluconate dehydrogenase + Term 482877 - 482912 7.4 + Prom 482986 - 483045 7.0 423 250 Tu 1 . + CDS 483106 - 483342 350 ## COG0836 Mannose-1-phosphate guanylyltransferase + Prom 485444 - 485503 13.8 424 251 Tu 1 . + CDS 485711 - 486877 1843 ## COG1004 Predicted UDP-glucose 6-dehydrogenase + Term 486890 - 486930 8.0 - Term 487775 - 487812 6.2 425 252 Tu 1 . - CDS 487823 - 488827 1322 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 488865 - 488924 4.3 + Prom 489823 - 489882 5.4 426 253 Tu 1 . + CDS 489905 - 490141 303 ## COG0836 Mannose-1-phosphate guanylyltransferase + Prom 491643 - 491702 80.3 427 254 Op 1 26/0.000 + CDS 491816 - 492610 451 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 428 254 Op 2 1/0.538 + CDS 492610 - 493824 601 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 429 254 Op 3 11/0.023 + CDS 493824 - 495101 549 ## COG0500 SAM-dependent methyltransferases 430 254 Op 4 25/0.000 + CDS 495104 - 498745 1287 ## COG0438 Glycosyltransferase 431 254 Op 5 25/0.000 + CDS 498813 - 499958 1253 ## COG0438 Glycosyltransferase 432 254 Op 6 . + CDS 499968 - 501083 1218 ## COG0438 Glycosyltransferase + Term 501245 - 501283 2.0 433 255 Op 1 24/0.000 - CDS 501122 - 501718 821 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 434 255 Op 2 23/0.000 - CDS 501712 - 502488 1136 ## COG0107 Imidazoleglycerol-phosphate synthase 435 255 Op 3 25/0.000 - CDS 502470 - 503207 1066 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 436 255 Op 4 18/0.000 - CDS 503207 - 503797 877 ## COG0118 Glutamine amidotransferase 437 255 Op 5 13/0.016 - CDS 503797 - 504864 1693 ## COG0131 Imidazoleglycerol-phosphate dehydratase 438 255 Op 6 19/0.000 - CDS 504861 - 505922 1371 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 439 255 Op 7 18/0.000 - CDS 505919 - 507223 1804 ## COG0141 Histidinol dehydrogenase 440 255 Op 8 . - CDS 507263 - 508162 1396 ## COG0040 ATP phosphoribosyltransferase - Prom 508183 - 508242 2.4 + Prom 508293 - 508352 5.5 441 256 Op 1 2/0.421 + CDS 508535 - 509359 1039 ## COG0451 Nucleoside-diphosphate-sugar epimerases 442 256 Op 2 4/0.265 + CDS 509398 - 510288 1063 ## COG0583 Transcriptional regulator + Term 510389 - 510431 9.6 + Prom 510314 - 510373 3.5 443 257 Tu 1 . + CDS 510578 - 511936 2260 ## COG0531 Amino acid transporters + Term 511958 - 511999 10.4 444 258 Op 1 . - CDS 513648 - 514163 496 ## Kvar_1585 NifQ family protein 445 258 Op 2 2/0.421 - CDS 514163 - 515569 1504 ## COG0535 Predicted Fe-S oxidoreductases - Prom 515648 - 515707 2.4 - Term 515643 - 515679 -0.1 446 259 Op 1 . - CDS 515734 - 517308 1836 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 447 259 Op 2 . - CDS 517305 - 518789 1794 ## COG2202 FOG: PAS/PAC domain 448 260 Tu 1 . + CDS 519109 - 519639 842 ## COG0716 Flavodoxins + Term 519707 - 519742 3.1 449 261 Op 1 . - CDS 519662 - 520462 917 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 450 261 Op 2 . - CDS 520462 - 520905 591 ## Kvar_1591 NifZ family protein 451 261 Op 3 . - CDS 520902 - 521159 303 ## Kvar_1592 NifW protein 452 261 Op 4 . - CDS 521162 - 522304 1573 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 453 261 Op 5 20/0.000 - CDS 522320 - 523522 1352 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 454 261 Op 6 . - CDS 523538 - 524377 1110 ## COG0822 NifU homolog involved in Fe-S cluster formation 455 262 Op 1 . - CDS 524572 - 525042 546 ## Kvar_1596 dinitrogenase iron-molybdenum cofactor biosynthesis protein 456 262 Op 2 6/0.092 - CDS 525029 - 526414 1480 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 457 262 Op 3 . - CDS 526424 - 527797 1771 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains - Prom 527858 - 527917 2.6 - Term 528462 - 528493 1.1 458 263 Op 1 . - CDS 528513 - 529175 551 ## Kvar_1599 dinitrogenase iron-molybdenum cofactor biosynthesis protein 459 263 Op 2 . - CDS 529186 - 529404 292 ## KPK_1711 probable nitrogen fixation protein FixT 460 263 Op 3 6/0.092 - CDS 529444 - 531006 2455 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 461 263 Op 4 5/0.153 - CDS 531062 - 532510 2244 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 462 263 Op 5 . - CDS 532527 - 533408 1265 ## COG1348 Nitrogenase subunit NifH (ATPase) - Prom 533479 - 533538 2.3 463 264 Tu 1 . + CDS 533812 - 537327 4370 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 537485 - 537523 -0.8 464 265 Tu 1 . - CDS 537344 - 537652 377 ## COG0640 Predicted transcriptional regulators - Prom 537711 - 537770 3.0 + Prom 537770 - 537829 4.1 465 266 Tu 1 . + CDS 537893 - 539995 2967 ## COG0480 Translation elongation factors (GTPases) - Term 539959 - 540001 0.1 466 267 Op 1 . - CDS 540101 - 540229 80 ## 467 267 Op 2 . - CDS 540230 - 540358 94 ## 468 267 Op 3 . - CDS 540359 - 541783 1967 ## COG2925 Exonuclease I - Prom 541887 - 541946 3.6 + Prom 541745 - 541804 4.0 469 268 Tu 1 . + CDS 541964 - 543127 1430 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 543132 - 543170 1.9 + Prom 543209 - 543268 3.3 470 269 Op 1 4/0.265 + CDS 543304 - 543777 758 ## COG3449 DNA gyrase inhibitor + Prom 543795 - 543854 3.9 471 269 Op 2 2/0.421 + CDS 543876 - 544934 1355 ## COG1289 Predicted membrane protein + Term 544955 - 544993 2.2 + Prom 544944 - 545003 4.1 472 270 Tu 1 . + CDS 545102 - 545521 362 ## COG2926 Uncharacterized protein conserved in bacteria 473 271 Op 1 11/0.023 + CDS 545738 - 546478 1107 ## COG0368 Cobalamin-5-phosphate synthase 474 271 Op 2 . + CDS 546506 - 547573 1180 ## COG2038 NaMN:DMB phosphoribosyltransferase - Term 547377 - 547403 -0.7 475 272 Tu 1 . - CDS 547619 - 548707 1498 ## COG0499 S-adenosylhomocysteine hydrolase - Prom 548886 - 548945 7.3 + Prom 548843 - 548902 7.2 476 273 Tu 1 . + CDS 548929 - 549660 1039 ## COG3448 CBS-domain-containing membrane protein - Term 549603 - 549653 -0.0 477 274 Tu 1 . - CDS 549682 - 550071 610 ## Kvar_1618 4-oxalocrotonate tautomerase - Prom 550109 - 550168 1.8 + Prom 550102 - 550161 3.5 478 275 Tu 1 . + CDS 550187 - 551143 1196 ## COG0583 Transcriptional regulator - Term 550873 - 550907 -0.9 479 276 Op 1 . - CDS 551103 - 551843 876 ## COG0095 Lipoate-protein ligase A 480 276 Op 2 . - CDS 551890 - 553209 1697 ## COG0477 Permeases of the major facilitator superfamily - Prom 553389 - 553448 5.2 + Prom 553365 - 553424 7.4 481 277 Op 1 3/0.346 + CDS 553516 - 554013 449 ## COG3915 Uncharacterized protein conserved in bacteria 482 277 Op 2 . + CDS 554024 - 555934 2071 ## COG2199 FOG: GGDEF domain + Term 555967 - 556007 9.1 + Prom 555982 - 556041 7.8 483 278 Op 1 . + CDS 556157 - 556489 366 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 484 278 Op 2 . + CDS 556496 - 556831 419 ## KP1_3656 hypothetical protein 485 279 Tu 1 . - CDS 556837 - 557751 923 ## COG0583 Transcriptional regulator - Prom 557794 - 557853 5.4 + Prom 557767 - 557826 2.0 486 280 Tu 1 . + CDS 557883 - 558221 363 ## Kvar_1627 hypothetical protein + Prom 559135 - 559194 1.8 487 281 Tu 1 . + CDS 559296 - 560132 1028 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 560265 - 560300 -0.9 488 282 Tu 1 . + CDS 560338 - 561309 915 ## COG2203 FOG: GAF domain 489 283 Tu 1 . - CDS 561306 - 562406 1097 ## Kvar_1630 hypothetical protein + Prom 563056 - 563115 4.1 490 284 Tu 1 . + CDS 563271 - 564446 0 ## Kvar_1633 hypothetical protein + Prom 564715 - 564774 2.7 491 285 Tu 1 . + CDS 564805 - 566589 710 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family 492 286 Tu 1 . + CDS 568034 - 568393 203 ## COG0210 Superfamily I DNA and RNA helicases + Term 568623 - 568660 -0.2 493 287 Op 1 . - CDS 568525 - 568677 60 ## Kvar_1636 hypothetical protein - Term 568697 - 568754 3.6 494 287 Op 2 . - CDS 568755 - 569459 75 ## Kvar_1637 hypothetical protein - Prom 569489 - 569548 6.2 495 288 Op 1 . - CDS 570413 - 571780 -164 ## Kvar_1638 hypothetical protein 496 288 Op 2 . - CDS 571837 - 575973 888 ## Kvar_1639 hypothetical protein - Prom 576181 - 576240 1.6 497 289 Tu 1 . - CDS 576872 - 577870 259 ## Kvar_1640 hypothetical protein + Prom 579166 - 579225 3.3 498 290 Op 1 8/0.039 + CDS 579383 - 579640 305 ## COG2336 Growth regulator 499 290 Op 2 . + CDS 579641 - 579973 186 ## COG2337 Growth inhibitor + Term 579999 - 580028 2.1 - TRNA 580027 - 580102 87.1 # Asn GTT 0 0 + Prom 580173 - 580232 3.1 500 291 Tu 1 . + CDS 580296 - 581732 1960 ## COG0534 Na+-driven multidrug efflux pump + Term 581941 - 581982 8.1 + TRNA 581861 - 581936 87.1 # Asn GTT 0 0 - Term 582178 - 582217 3.0 501 292 Op 1 4/0.265 - CDS 582411 - 582713 441 ## COG1396 Predicted transcriptional regulators 502 292 Op 2 . - CDS 582718 - 583047 70 ## COG4683 Uncharacterized protein conserved in bacteria - Prom 583079 - 583138 3.0 + Prom 583429 - 583488 4.8 503 293 Tu 1 . + CDS 583545 - 584756 203 ## gi|290508719|ref|ZP_06548090.1| predicted protein + Term 584784 - 584831 9.0 - Term 584588 - 584628 3.3 504 294 Tu 1 . - CDS 584845 - 586299 2064 ## COG0775 Nucleoside phosphorylase - Prom 586331 - 586390 5.2 505 295 Tu 1 . - CDS 586430 - 586675 165 ## Kvar_1645 polymyxin B resistance protein PmrD - Prom 586735 - 586794 3.1 + Prom 586814 - 586873 2.7 506 296 Tu 1 . + CDS 586946 - 588568 1922 ## COG2267 Lysophospholipase 507 297 Tu 1 . - CDS 588479 - 589411 1288 ## Kvar_1647 hypothetical protein 508 298 Op 1 1/0.538 - CDS 589530 - 590507 1280 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 509 298 Op 2 . - CDS 590504 - 591208 694 ## COG1309 Transcriptional regulator - Prom 591439 - 591498 4.2 510 299 Tu 1 . + CDS 591768 - 593402 1559 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 511 300 Op 1 6/0.092 + CDS 594119 - 595075 625 ## COG1045 Serine acetyltransferase 512 300 Op 2 . + CDS 595127 - 596044 478 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 513 300 Op 3 2/0.421 + CDS 596037 - 596465 361 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 514 300 Op 4 1/0.538 + CDS 596525 - 596815 297 ## COG1977 Molybdopterin converting factor, small subunit 515 300 Op 5 . + CDS 596812 - 597987 896 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 516 300 Op 6 . + CDS 598025 - 598969 977 ## Kvar_1656 hypothetical protein 517 300 Op 7 . + CDS 598956 - 600446 1241 ## COG0520 Selenocysteine lyase + Term 600491 - 600520 2.1 - TRNA 600520 - 600595 87.1 # Asn GTT 0 0 + Prom 600750 - 600809 5.2 518 301 Tu 1 9/0.037 + CDS 600926 - 601843 1161 ## COG0583 Transcriptional regulator + Prom 601861 - 601920 3.5 519 302 Op 1 3/0.346 + CDS 601950 - 602900 1341 ## COG0583 Transcriptional regulator 520 302 Op 2 . + CDS 602984 - 603919 1166 ## COG1376 Uncharacterized protein conserved in bacteria - Term 603843 - 603899 3.0 521 303 Tu 1 . - CDS 604118 - 604354 187 ## KPK_1816 hypothetical protein - Prom 604377 - 604436 3.4 - Term 604582 - 604643 1.8 522 304 Tu 1 . - CDS 604663 - 605583 550 ## COG0583 Transcriptional regulator - Prom 605676 - 605735 2.3 + Prom 605635 - 605694 3.0 523 305 Tu 1 . + CDS 605726 - 606115 172 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 606570 - 606629 2.2 524 306 Tu 1 . + CDS 606773 - 607201 190 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Prom 607427 - 607486 2.6 525 307 Op 1 31/0.000 + CDS 607599 - 608495 832 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 526 307 Op 2 34/0.000 + CDS 608492 - 609430 768 ## COG0765 ABC-type amino acid transport system, permease component 527 307 Op 3 . + CDS 609423 - 610184 274 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 610227 - 610257 3.4 528 308 Tu 1 1/0.538 - CDS 610179 - 611522 633 ## COG2079 Uncharacterized protein involved in propionate catabolism - Prom 611552 - 611611 2.2 - Term 611566 - 611596 0.2 529 309 Op 1 2/0.421 - CDS 611690 - 612874 983 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 530 309 Op 2 . - CDS 612875 - 613411 518 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 531 309 Op 3 . - CDS 613408 - 614790 1202 ## COG0015 Adenylosuccinate lyase + Prom 615009 - 615068 4.3 532 310 Op 1 . + CDS 615156 - 616241 982 ## COG0371 Glycerol dehydrogenase and related enzymes 533 310 Op 2 . + CDS 616246 - 617577 1112 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 534 310 Op 3 . + CDS 617599 - 618810 721 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 619011 - 619054 6.5 - TRNA 619047 - 619122 87.1 # Asn GTT 0 0 - Term 619077 - 619115 -0.8 535 311 Tu 1 . - CDS 619223 - 620020 767 ## COG3228 Uncharacterized protein conserved in bacteria - Prom 620144 - 620203 80.3 + TRNA 620114 - 620203 75.5 # Ser CGA 0 0 - Term 620438 - 620466 1.3 536 312 Tu 1 . - CDS 620478 - 621623 1762 ## COG3203 Outer membrane protein (porin) - Prom 621708 - 621767 11.5 + Prom 622052 - 622111 5.3 537 313 Op 1 . + CDS 622162 - 622443 280 ## KP1_3562 putative outer membrane protein N precursor 538 313 Op 2 4/0.265 + CDS 622486 - 623193 700 ## COG1418 Predicted HD superfamily hydrolase 539 313 Op 3 6/0.092 + CDS 623270 - 624670 1291 ## COG0270 Site-specific DNA methylase 540 313 Op 4 . + CDS 624651 - 625145 443 ## COG3727 DNA G:T-mismatch repair endonuclease - Term 625015 - 625043 -0.9 541 314 Tu 1 . - CDS 625120 - 626031 1096 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 626133 - 626192 4.9 + Prom 626097 - 626156 2.8 542 315 Tu 1 . + CDS 626214 - 627125 1133 ## COG2354 Uncharacterized protein conserved in bacteria 543 316 Tu 1 . + CDS 627241 - 628920 1753 ## COG2199 FOG: GGDEF domain 544 317 Tu 1 . - CDS 629220 - 629441 237 ## Kvar_1684 hypothetical protein - Prom 629472 - 629531 6.2 545 318 Tu 1 . + CDS 629575 - 629766 282 ## Kvar_1685 dextransucrase DSRB + Term 629772 - 629806 7.6 - Term 629758 - 629794 8.0 546 319 Tu 1 . - CDS 629799 - 630422 377 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 630648 - 630707 6.4 + Prom 630716 - 630775 3.0 547 320 Tu 1 . + CDS 630821 - 631228 463 ## Kvar_1687 hypothetical protein 548 321 Tu 1 . - CDS 631275 - 632762 1742 ## COG0366 Glycosidases - Prom 632863 - 632922 2.9 + Prom 632822 - 632881 4.9 549 322 Tu 1 2/0.421 + CDS 632963 - 633763 1137 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 633775 - 633817 4.5 + Prom 633780 - 633839 8.2 550 323 Op 1 1/0.538 + CDS 633859 - 634845 1403 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase 551 323 Op 2 34/0.000 + CDS 634861 - 635529 932 ## COG0765 ABC-type amino acid transport system, permease component 552 323 Op 3 5/0.153 + CDS 635526 - 636278 257 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 636286 - 636341 18.6 + Prom 636511 - 636570 11.7 553 324 Tu 1 . + CDS 636633 - 637319 576 ## COG2771 DNA-binding HTH domain-containing proteins - Term 637214 - 637263 4.1 554 325 Tu 1 . - CDS 637387 - 637611 244 ## STM1949 hypothetical protein - Prom 637661 - 637720 5.4 + Prom 638094 - 638153 1.8 555 326 Op 1 3/0.346 + CDS 638229 - 638729 493 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 556 326 Op 2 9/0.037 + CDS 638726 - 640558 1846 ## COG0322 Nuclease subunit of the excinuclease complex 557 326 Op 3 . + CDS 640616 - 641164 724 ## COG0558 Phosphatidylglycerophosphate synthase + TRNA 641315 - 641390 93.7 # Gly GCC 0 0 + TRNA 641431 - 641504 53.9 # Cys GCA 0 0 + TRNA 641518 - 641604 70.0 # Leu TAA 0 0 558 327 Tu 1 . - CDS 641869 - 642759 123 ## KPK_1875 hypothetical protein - Prom 642831 - 642890 3.8 + Prom 643001 - 643060 1.8 559 328 Op 1 . + CDS 643089 - 643970 690 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Prom 643975 - 644034 2.9 560 328 Op 2 . + CDS 644058 - 644726 826 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 644733 - 644760 1.5 - Term 644688 - 644720 -0.2 561 329 Tu 1 . - CDS 644754 - 645896 1428 ## COG0814 Amino acid permeases - Prom 646054 - 646113 4.8 + Prom 646010 - 646069 4.1 562 330 Tu 1 . + CDS 646156 - 646395 182 ## Kvar_1702 hypothetical protein + Term 646398 - 646443 0.6 - Term 646388 - 646423 8.1 563 331 Tu 1 . - CDS 646432 - 646929 707 ## COG1528 Ferritin-like protein - Prom 646966 - 647025 9.7 564 332 Tu 1 . + CDS 647341 - 647979 994 ## COG0698 Ribose 5-phosphate isomerase RpiB - Term 647727 - 647781 -0.1 565 333 Tu 1 . - CDS 648013 - 649437 1636 ## COG0477 Permeases of the major facilitator superfamily - Prom 649510 - 649569 37.8 + Prom 649831 - 649890 40.0 566 334 Tu 1 . + CDS 649934 - 650185 445 ## Kvar_1706 hypothetical protein + Term 650191 - 650229 8.1 - Term 650178 - 650215 4.1 567 335 Tu 1 . - CDS 650223 - 651785 1960 ## COG2211 Na+/melibiose symporter and related transporters - Prom 651918 - 651977 5.0 - Term 651971 - 652006 5.7 568 336 Tu 1 . - CDS 652029 - 652538 456 ## COG1528 Ferritin-like protein - Prom 652632 - 652691 2.0 + Prom 653323 - 653382 3.6 569 337 Op 1 16/0.000 + CDS 653428 - 654408 1456 ## COG1879 ABC-type sugar transport system, periplasmic component 570 337 Op 2 21/0.000 + CDS 654469 - 655983 181 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 571 337 Op 3 1/0.538 + CDS 655998 - 656978 1488 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Prom 657027 - 657086 5.2 572 338 Op 1 8/0.039 + CDS 657140 - 657928 648 ## COG1877 Trehalose-6-phosphatase 573 338 Op 2 . + CDS 657903 - 659327 1825 ## COG0380 Trehalose-6-phosphate synthase + Term 659339 - 659368 1.4 - Term 659292 - 659341 9.5 574 339 Tu 1 . - CDS 659351 - 659779 442 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 659917 - 659976 6.2 + Prom 659901 - 659960 5.8 575 340 Op 1 . + CDS 660132 - 661715 1841 ## COG2211 Na+/melibiose symporter and related transporters 576 340 Op 2 . + CDS 661720 - 662859 1573 ## COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins + Term 662895 - 662928 4.5 - Term 662882 - 662916 3.3 577 341 Tu 1 . - CDS 662921 - 664654 2421 ## COG0018 Arginyl-tRNA synthetase - Prom 664719 - 664778 3.0 + Prom 664797 - 664856 3.0 578 342 Op 1 3/0.346 + CDS 664890 - 665459 571 ## COG3102 Uncharacterized protein conserved in bacteria 579 342 Op 2 . + CDS 665536 - 666279 467 ## COG3142 Uncharacterized protein involved in copper resistance + Term 666331 - 666368 4.0 580 343 Op 1 17/0.000 - CDS 666361 - 667365 1264 ## COG0500 SAM-dependent methyltransferases 581 343 Op 2 2/0.421 - CDS 667362 - 668105 1062 ## COG0500 SAM-dependent methyltransferases 582 343 Op 3 2/0.421 - CDS 668145 - 668540 509 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 583 343 Op 4 1/0.538 - CDS 668593 - 669411 840 ## COG1801 Uncharacterized conserved protein 584 343 Op 5 . - CDS 669408 - 669974 608 ## COG1335 Amidases related to nicotinamidase - Prom 670129 - 670188 3.6 + Prom 670088 - 670147 5.5 585 344 Op 1 5/0.153 + CDS 670242 - 672029 2534 ## COG0173 Aspartyl-tRNA synthetase 586 344 Op 2 7/0.057 + CDS 672031 - 672474 461 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 587 344 Op 3 8/0.039 + CDS 672502 - 673242 1044 ## COG0217 Uncharacterized conserved protein 588 344 Op 4 14/0.014 + CDS 673277 - 673798 608 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Term 673809 - 673840 3.4 589 345 Op 1 29/0.000 + CDS 673878 - 674489 951 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 590 345 Op 2 . + CDS 674498 - 675508 1397 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 675535 - 675576 8.3 591 346 Op 1 42/0.000 - CDS 675572 - 676357 1190 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 592 346 Op 2 . - CDS 676357 - 677109 217 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 677136 - 677195 5.6 + Prom 677095 - 677154 5.6 593 347 Op 1 . + CDS 677280 - 678131 347 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 594 347 Op 2 1/0.538 + CDS 678147 - 679466 1647 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 679477 - 679524 12.2 + Prom 679490 - 679549 4.3 595 348 Tu 1 . + CDS 679584 - 680555 1137 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 680567 - 680606 6.1 596 349 Op 1 1/0.538 - CDS 680586 - 681302 289 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 597 349 Op 2 3/0.346 - CDS 681367 - 683052 1637 ## COG0281 Malic enzyme 598 349 Op 3 . - CDS 683115 - 684062 1020 ## COG0679 Predicted permeases - Prom 684288 - 684347 6.0 + Prom 684240 - 684299 8.1 599 350 Tu 1 . + CDS 684482 - 685816 1241 ## COG3493 Na+/citrate symporter - Term 685828 - 685866 10.0 600 351 Op 1 . - CDS 685878 - 687320 1942 ## COG0469 Pyruvate kinase 601 351 Op 2 . - CDS 687446 - 688333 845 ## COG1737 Transcriptional regulators + Prom 688416 - 688475 4.7 602 352 Op 1 . + CDS 688511 - 688660 56 ## KP1_3497 hypothetical protein 603 352 Op 2 4/0.265 + CDS 688671 - 690146 2162 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Term 690227 - 690265 6.0 + Prom 690215 - 690274 7.5 604 353 Op 1 8/0.039 + CDS 690369 - 692180 2005 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 605 353 Op 2 . + CDS 692219 - 692860 1070 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 692877 - 692922 7.5 606 354 Tu 1 . - CDS 692918 - 694096 1416 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) - Prom 694199 - 694258 5.9 + Prom 694148 - 694207 7.4 607 355 Op 1 . + CDS 694232 - 694579 442 ## COG3141 Uncharacterized protein conserved in bacteria + Prom 694635 - 694694 2.6 608 355 Op 2 . + CDS 694721 - 695383 642 ## COG2979 Uncharacterized protein conserved in bacteria + Term 695441 - 695483 6.1 + Prom 695391 - 695450 1.7 609 356 Tu 1 . + CDS 695504 - 697564 2780 ## COG1770 Protease II + Term 697729 - 697757 1.4 610 357 Op 1 . - CDS 697568 - 698227 812 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 611 357 Op 2 . - CDS 698306 - 698536 311 ## Kvar_1750 DNA polymerase II subunit beta - Prom 698590 - 698649 4.6 + Prom 698563 - 698622 5.8 612 358 Op 1 8/0.039 + CDS 698650 - 699024 434 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC 613 358 Op 2 . + CDS 699028 - 699897 1005 ## COG1276 Putative copper export protein 614 358 Op 3 . + CDS 699914 - 700252 281 ## Kvar_1753 hypothetical protein + Term 700290 - 700332 6.0 - Term 700690 - 700732 1.1 615 359 Tu 1 . - CDS 700897 - 701040 194 ## - Prom 701067 - 701126 2.0 - Term 701095 - 701128 4.6 616 360 Tu 1 . - CDS 701144 - 702103 857 ## COG2990 Uncharacterized protein conserved in bacteria - Prom 702240 - 702299 5.2 + Prom 702144 - 702203 7.8 617 361 Tu 1 . + CDS 702269 - 702922 512 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 618 362 Tu 1 . - CDS 702919 - 703110 195 ## Kvar_1828 hypothetical protein - Term 703161 - 703206 3.0 619 363 Op 1 . - CDS 703208 - 703516 262 ## Kvar_1829 hypothetical protein - Term 703530 - 703558 -1.0 620 363 Op 2 4/0.265 - CDS 703563 - 704951 1478 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Prom 705021 - 705080 2.5 - Term 705029 - 705065 9.4 621 364 Op 1 11/0.023 - CDS 705126 - 707759 3525 ## COG3008 Paraquat-inducible protein B 622 364 Op 2 . - CDS 707728 - 709011 1021 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 709151 - 709210 3.5 + Prom 708953 - 709012 2.9 623 365 Op 1 4/0.265 + CDS 709087 - 709641 295 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 624 365 Op 2 7/0.057 + CDS 709739 - 710416 633 ## COG3109 Activator of osmoprotectant transporter ProP + Term 710466 - 710506 6.1 + Prom 710443 - 710502 1.5 625 366 Tu 1 . + CDS 710535 - 712484 2690 ## COG0793 Periplasmic protease + Term 712493 - 712526 5.2 + Prom 712509 - 712568 3.6 626 367 Tu 1 . + CDS 712723 - 713604 1145 ## COG0501 Zn-dependent protease with chaperone function + Term 713633 - 713668 4.1 - Term 713621 - 713654 4.5 627 368 Tu 1 . - CDS 713674 - 715044 1811 ## COG0477 Permeases of the major facilitator superfamily - Prom 715164 - 715223 5.3 + Prom 715123 - 715182 7.0 628 369 Tu 1 . + CDS 715222 - 716013 1049 ## COG1414 Transcriptional regulator + Term 716030 - 716079 15.7 - Term 716017 - 716065 13.1 629 370 Tu 1 . - CDS 716072 - 716311 338 ## Kvar_1839 hypothetical protein - Prom 716337 - 716396 4.7 + Prom 716610 - 716669 3.5 630 371 Tu 1 . + CDS 716689 - 716979 258 ## Kvar_1841 hypothetical protein + Term 717129 - 717162 1.1 + Prom 717466 - 717525 6.1 631 372 Tu 1 . + CDS 717728 - 717937 271 ## COG1278 Cold shock proteins + Term 717959 - 717998 7.5 + Prom 718060 - 718119 3.5 632 373 Op 1 2/0.421 + CDS 718143 - 719873 2041 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 633 373 Op 2 . + CDS 719934 - 720728 723 ## COG0500 SAM-dependent methyltransferases 634 374 Tu 1 . - CDS 720732 - 721298 759 ## COG1971 Predicted membrane protein - Term 721484 - 721522 -0.4 635 375 Tu 1 4/0.265 - CDS 721718 - 722176 481 ## COG4811 Predicted membrane protein - Term 722193 - 722224 5.5 636 376 Op 1 13/0.016 - CDS 722239 - 723090 1121 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 637 376 Op 2 13/0.016 - CDS 723103 - 723903 1011 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 638 376 Op 3 . - CDS 723960 - 724931 1178 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 725043 - 725102 7.5 639 377 Tu 1 . + CDS 725390 - 726937 2082 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 726945 - 726983 9.0 640 378 Tu 1 . - CDS 726971 - 728542 1538 ## COG2200 FOG: EAL domain - Prom 728591 - 728650 3.3 - Term 728625 - 728658 2.1 641 379 Tu 1 . - CDS 728725 - 730089 1873 ## COG1760 L-serine deaminase - Prom 730139 - 730198 2.9 642 380 Op 1 6/0.092 - CDS 730252 - 730830 719 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 643 380 Op 2 . - CDS 730834 - 732189 1464 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 732252 - 732311 4.5 + Prom 732196 - 732255 2.2 644 381 Tu 1 . + CDS 732278 - 732481 399 ## COG3140 Uncharacterized protein conserved in bacteria + Term 732635 - 732679 2.5 - Term 732236 - 732274 -0.6 645 382 Tu 1 . - CDS 732482 - 732826 586 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 732825 - 732884 2.9 646 383 Tu 1 . + CDS 732958 - 734868 2417 ## COG1199 Rad3-related DNA helicases 647 384 Op 1 7/0.057 + CDS 735014 - 735709 241 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase 648 384 Op 2 7/0.057 + CDS 735748 - 736329 823 ## COG3065 Starvation-inducible outer membrane lipoprotein + Term 736350 - 736395 14.2 + Prom 736419 - 736478 5.3 649 385 Op 1 8/0.039 + CDS 736535 - 738220 2292 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 738238 - 738270 5.4 650 385 Op 2 . + CDS 738289 - 739416 1409 ## COG0349 Ribonuclease D + Term 739445 - 739479 6.5 - Term 739432 - 739467 -0.9 651 386 Op 1 22/0.000 - CDS 739493 - 739762 435 ## COG0851 Septum formation topological specificity factor 652 386 Op 2 22/0.000 - CDS 739766 - 740578 1025 ## COG2894 Septum formation inhibitor-activating ATPase 653 386 Op 3 . - CDS 740602 - 741303 330 ## COG0850 Septum formation inhibitor - Prom 741364 - 741423 3.3 + Prom 741328 - 741387 2.5 654 387 Op 1 2/0.421 + CDS 741430 - 741711 311 ## COG3100 Uncharacterized protein conserved in bacteria 655 387 Op 2 1/0.538 + CDS 741728 - 742387 915 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Prom 742396 - 742455 3.8 656 387 Op 3 . + CDS 742482 - 742928 674 ## COG2983 Uncharacterized conserved protein + Term 743171 - 743224 1.9 657 388 Tu 1 . - CDS 742937 - 743281 439 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance - Prom 743350 - 743409 2.9 - Term 743374 - 743407 3.8 658 389 Tu 1 . - CDS 743432 - 743962 711 ## COG1495 Disulfide bond formation protein DsbB - Prom 743988 - 744047 2.8 - Term 743996 - 744032 2.1 659 390 Tu 1 . - CDS 744091 - 745641 2119 ## COG3067 Na+/H+ antiporter - Prom 745688 - 745747 3.4 + Prom 745800 - 745859 4.6 660 391 Tu 1 . + CDS 745890 - 746609 1079 ## COG2186 Transcriptional regulators + Term 746638 - 746674 5.4 - Term 746627 - 746657 4.1 661 392 Tu 1 . - CDS 746684 - 748216 2216 ## COG2719 Uncharacterized conserved protein - Prom 748371 - 748430 3.6 + Prom 748443 - 748502 6.8 662 393 Op 1 7/0.057 + CDS 748538 - 749836 1701 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 663 393 Op 2 . + CDS 749846 - 750916 1444 ## COG0787 Alanine racemase - Term 750821 - 750863 -0.4 664 394 Op 1 1/0.538 - CDS 750933 - 752666 2252 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain - Prom 752688 - 752747 3.0 665 394 Op 2 . - CDS 752759 - 753673 1107 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 753862 - 753921 3.4 + Prom 753655 - 753714 4.3 666 395 Tu 1 . + CDS 753849 - 754460 792 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 754466 - 754508 13.2 - Term 754388 - 754418 2.5 667 396 Op 1 . - CDS 754509 - 755318 499 ## KPK_1990 hypothetical protein 668 396 Op 2 . - CDS 755346 - 756197 489 ## KPK_1991 hypothetical protein - Prom 756227 - 756286 2.1 - Term 756323 - 756358 3.8 669 397 Tu 1 . - CDS 756377 - 758497 2599 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 758580 - 758639 3.1 - Term 758700 - 758739 4.1 670 398 Tu 1 . - CDS 758759 - 760492 2282 ## COG1626 Neutral trehalase + Prom 761049 - 761108 80.3 671 399 Op 1 . + CDS 761294 - 761947 665 ## COG0657 Esterase/lipase + Term 761974 - 762010 0.3 + Prom 762020 - 762079 3.2 672 399 Op 2 9/0.037 + CDS 762130 - 763569 1841 ## COG2308 Uncharacterized conserved protein 673 399 Op 3 9/0.037 + CDS 763563 - 764492 1339 ## COG2307 Uncharacterized protein conserved in bacteria 674 399 Op 4 3/0.346 + CDS 764489 - 765304 1072 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 675 399 Op 5 . + CDS 765321 - 766067 1054 ## COG3484 Predicted proteasome-type protease 676 400 Op 1 3/0.346 - CDS 766129 - 767214 1457 ## COG3839 ABC-type sugar transport systems, ATPase components 677 400 Op 2 2/0.421 - CDS 767201 - 767398 159 ## COG0524 Sugar kinases, ribokinase family - Prom 767522 - 767581 80.3 678 401 Op 1 1/0.538 - CDS 767583 - 768248 711 ## COG0524 Sugar kinases, ribokinase family 679 401 Op 2 38/0.000 - CDS 768251 - 769090 1297 ## COG0395 ABC-type sugar transport system, permease component 680 401 Op 3 35/0.000 - CDS 769080 - 769988 1162 ## COG1175 ABC-type sugar transport systems, permease components 681 401 Op 4 . - CDS 769998 - 771242 1640 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 771420 - 771479 2.3 + Prom 771376 - 771435 5.1 682 402 Op 1 . + CDS 771457 - 772665 1362 ## COG1940 Transcriptional regulator/sugar kinase 683 402 Op 2 2/0.421 + CDS 772713 - 773726 1122 ## COG3239 Fatty acid desaturase 684 402 Op 3 . + CDS 773719 - 774519 933 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component + Term 774583 - 774619 0.1 - Term 774515 - 774553 8.0 685 403 Op 1 . - CDS 774567 - 775898 1674 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 686 403 Op 2 13/0.016 - CDS 775942 - 776841 1102 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 687 403 Op 3 3/0.346 - CDS 776902 - 777570 839 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 688 403 Op 4 24/0.000 - CDS 777570 - 778199 1003 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 689 403 Op 5 . - CDS 778192 - 779280 1313 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components - Prom 779496 - 779555 3.2 + Prom 779253 - 779312 3.7 690 404 Tu 1 . + CDS 779511 - 779618 61 ## + Term 779676 - 779706 -0.9 691 405 Op 1 4/0.265 + CDS 780038 - 780976 1117 ## COG0583 Transcriptional regulator 692 405 Op 2 4/0.265 + CDS 781070 - 782059 1082 ## COG1171 Threonine dehydratase 693 405 Op 3 3/0.346 + CDS 782085 - 783416 2060 ## COG0814 Amino acid permeases 694 405 Op 4 3/0.346 + CDS 783444 - 784652 1671 ## COG0282 Acetate kinase 695 405 Op 5 . + CDS 784681 - 786975 3283 ## COG1882 Pyruvate-formate lyase + Term 786991 - 787029 6.7 696 406 Op 1 20/0.000 + CDS 787463 - 788521 1674 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 697 406 Op 2 24/0.000 + CDS 788631 - 789545 1440 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 698 406 Op 3 19/0.000 + CDS 789555 - 790841 1798 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 699 406 Op 4 18/0.000 + CDS 790838 - 791713 251 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 700 406 Op 5 . + CDS 791710 - 792429 242 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 701 407 Tu 1 . - CDS 792435 - 793328 1227 ## COG0583 Transcriptional regulator - Prom 793505 - 793564 6.4 + Prom 793371 - 793430 5.1 702 408 Tu 1 . + CDS 793612 - 795255 2262 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Term 795228 - 795277 -0.0 703 409 Tu 1 . - CDS 795305 - 795781 801 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 795823 - 795882 3.2 + Prom 795794 - 795853 3.8 704 410 Tu 1 . + CDS 795889 - 796812 1052 ## COG0583 Transcriptional regulator + Prom 796942 - 797001 1.7 705 411 Op 1 . + CDS 797022 - 798413 1763 ## COG0477 Permeases of the major facilitator superfamily 706 411 Op 2 . + CDS 798428 - 799234 966 ## COG0725 ABC-type molybdate transport system, periplasmic component - Term 799112 - 799157 -0.1 707 412 Tu 1 . - CDS 799209 - 800108 919 ## COG0583 Transcriptional regulator 708 413 Tu 1 . - CDS 800221 - 800703 647 ## KPN_02279 cold shock protein E - Prom 800738 - 800797 2.4 + Prom 800676 - 800735 2.4 709 414 Tu 1 . + CDS 800894 - 801592 202 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Term 801726 - 801773 1.9 - Term 801488 - 801529 -0.0 710 415 Tu 1 . - CDS 801617 - 802156 747 ## COG3122 Uncharacterized protein conserved in bacteria - Prom 802358 - 802417 6.7 + Prom 802346 - 802405 5.6 711 416 Op 1 1/0.538 + CDS 802525 - 803214 876 ## COG2186 Transcriptional regulators 712 416 Op 2 2/0.421 + CDS 803211 - 804128 630 ## COG3734 2-keto-3-deoxy-galactonokinase 713 416 Op 3 1/0.538 + CDS 804073 - 804690 643 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 714 416 Op 4 7/0.057 + CDS 804687 - 805835 1540 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 715 416 Op 5 3/0.346 + CDS 805930 - 807243 1685 ## COG0477 Permeases of the major facilitator superfamily 716 416 Op 6 . + CDS 807240 - 808187 1129 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Term 808183 - 808239 6.2 717 417 Tu 1 . - CDS 808245 - 808574 365 ## COG2105 Uncharacterized conserved protein - Prom 808748 - 808807 7.0 718 418 Op 1 8/0.039 + CDS 809207 - 810547 1454 ## COG3522 Uncharacterized protein conserved in bacteria 719 418 Op 2 1/0.538 + CDS 810544 - 811197 711 ## COG3455 Uncharacterized protein conserved in bacteria 720 418 Op 3 . + CDS 811201 - 812898 1400 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 721 419 Tu 1 . + CDS 813085 - 813180 60 ## + Prom 813216 - 813275 4.0 722 420 Op 1 . + CDS 813360 - 815846 1696 ## COG3501 Uncharacterized protein conserved in bacteria 723 420 Op 2 . + CDS 815865 - 818126 955 ## KP1_3382 hypothetical protein 724 420 Op 3 1/0.538 + CDS 818148 - 819038 43 ## COG1262 Uncharacterized conserved protein + Term 819086 - 819118 0.0 + Prom 819103 - 819162 3.3 725 421 Tu 1 1/0.538 + CDS 819214 - 820104 125 ## COG1262 Uncharacterized conserved protein + Prom 820358 - 820417 2.6 726 422 Tu 1 . + CDS 820438 - 821181 42 ## COG1262 Uncharacterized conserved protein + Prom 821586 - 821645 4.5 727 423 Tu 1 . + CDS 821706 - 822251 133 ## COG1262 Uncharacterized conserved protein + Prom 822274 - 822333 8.3 728 424 Tu 1 . + CDS 822387 - 822611 132 ## KPN_02255 hypothetical protein + Prom 823387 - 823446 6.8 729 425 Op 1 . + CDS 823472 - 823738 182 ## COG4104 Uncharacterized conserved protein 730 425 Op 2 . + CDS 823742 - 824899 615 ## KP1_3371 hypothetical protein 731 425 Op 3 . + CDS 824883 - 828293 2452 ## COG3523 Uncharacterized protein conserved in bacteria 732 426 Op 1 9/0.037 + CDS 828427 - 830190 1668 ## COG3519 Uncharacterized protein conserved in bacteria 733 426 Op 2 1/0.538 + CDS 830220 - 831239 591 ## COG3520 Uncharacterized protein conserved in bacteria 734 426 Op 3 1/0.538 + CDS 831220 - 831756 454 ## COG3521 Uncharacterized protein conserved in bacteria 735 426 Op 4 1/0.538 + CDS 831759 - 832202 560 ## COG3518 Uncharacterized protein conserved in bacteria 736 426 Op 5 3/0.346 + CDS 832225 - 832794 631 ## COG3515 Uncharacterized protein conserved in bacteria 737 427 Tu 1 . + CDS 832985 - 833608 392 ## COG3515 Uncharacterized protein conserved in bacteria + Prom 833672 - 833731 4.9 738 428 Op 1 . + CDS 833757 - 834671 1078 ## COG1879 ABC-type sugar transport system, periplasmic component 739 428 Op 2 . + CDS 834755 - 835084 123 ## Kvar_1938 hypothetical protein + Term 835107 - 835136 2.1 - Term 835095 - 835124 2.1 740 429 Tu 1 14/0.014 - CDS 835166 - 836260 1550 ## COG0012 Predicted GTPase, probable translation factor - Prom 836289 - 836348 3.4 - Term 836333 - 836371 4.1 741 430 Tu 1 . - CDS 836378 - 836962 611 ## COG0193 Peptidyl-tRNA hydrolase - Prom 837035 - 837094 2.5 + Prom 837031 - 837090 3.4 742 431 Tu 1 . + CDS 837235 - 837510 317 ## Ent638_2343 hypothetical protein + Term 837527 - 837566 8.1 + Prom 837584 - 837643 1.7 743 432 Tu 1 . + CDS 837731 - 838777 1119 ## COG0789 Predicted transcriptional regulators 744 433 Tu 1 . - CDS 838778 - 840430 2445 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Term 840656 - 840697 5.9 745 434 Tu 1 . - CDS 840708 - 841655 967 ## COG0462 Phosphoribosylpyrophosphate synthetase - Term 841736 - 841787 0.3 746 435 Op 1 13/0.016 - CDS 841839 - 842687 683 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 747 435 Op 2 . - CDS 842687 - 843298 829 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis - Prom 843515 - 843574 5.4 + Prom 843474 - 843533 2.8 748 436 Op 1 9/0.037 + CDS 843570 - 844826 1712 ## COG0373 Glutamyl-tRNA reductase 749 436 Op 2 32/0.000 + CDS 844869 - 845951 1469 ## COG0216 Protein chain release factor A 750 436 Op 3 6/0.092 + CDS 845948 - 846799 511 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 751 436 Op 4 6/0.092 + CDS 846799 - 847191 331 ## COG3094 Uncharacterized protein conserved in bacteria 752 436 Op 5 8/0.039 + CDS 847195 - 848007 1214 ## COG2912 Uncharacterized conserved protein 753 436 Op 6 . + CDS 848047 - 848901 1331 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 848918 - 848965 11.6 - Term 848912 - 848949 10.1 754 437 Tu 1 . - CDS 848989 - 850089 1690 ## COG0387 Ca2+/H+ antiporter - Prom 850112 - 850171 8.6 + Prom 850068 - 850127 7.5 755 438 Tu 1 . + CDS 850353 - 850583 328 ## COG4572 Putative cation transport regulator + Term 850609 - 850634 -0.8 + Prom 850601 - 850660 2.7 756 439 Tu 1 . + CDS 850720 - 851400 738 ## COG3703 Uncharacterized protein involved in cation transport + Term 851456 - 851487 -0.6 - Term 851404 - 851438 7.4 757 440 Tu 1 . - CDS 851618 - 851860 235 ## KP1_3339 hypothetical protein - Prom 851989 - 852048 5.7 758 441 Tu 1 . - CDS 852099 - 852452 642 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction - Prom 852485 - 852544 3.0 + Prom 852385 - 852444 1.7 759 442 Tu 1 . + CDS 852521 - 853702 1429 ## COG3707 Response regulator with putative antiterminator output domain + Term 853704 - 853755 5.1 760 443 Op 1 21/0.000 + CDS 853944 - 855200 1555 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 761 443 Op 2 24/0.000 + CDS 855202 - 856086 1457 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 762 443 Op 3 1/0.538 + CDS 856096 - 856884 994 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 763 443 Op 4 2/0.421 + CDS 856895 - 860962 4704 ## COG1251 NAD(P)H-nitrite reductase 764 443 Op 5 . + CDS 860962 - 863568 2702 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 863590 - 863629 9.8 + Prom 863625 - 863684 2.6 765 444 Tu 1 . + CDS 863720 - 865102 1416 ## KPK_2090 hypothetical protein + Term 865113 - 865157 -0.9 766 445 Op 1 8/0.039 - CDS 865099 - 865749 1045 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 767 445 Op 2 . - CDS 865760 - 867538 1981 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 867596 - 867655 7.0 768 446 Tu 1 . + CDS 867850 - 869238 1908 ## COG2223 Nitrate/nitrite transporter + Term 869253 - 869316 6.1 + Prom 869413 - 869472 4.5 769 447 Op 1 13/0.016 + CDS 869642 - 873385 5149 ## COG5013 Nitrate reductase alpha subunit 770 447 Op 2 12/0.016 + CDS 873382 - 874917 2031 ## COG1140 Nitrate reductase beta subunit 771 447 Op 3 12/0.016 + CDS 874914 - 875624 983 ## COG2180 Nitrate reductase delta subunit 772 447 Op 4 . + CDS 875624 - 876301 1026 ## COG2181 Nitrate reductase gamma subunit + Term 876322 - 876353 3.2 773 448 Tu 1 . - CDS 876298 - 877194 193 ## PROTEIN SUPPORTED gi|90020671|ref|YP_526498.1| ribosomal protein S6 - Prom 877233 - 877292 3.6 + Prom 877216 - 877275 3.1 774 449 Tu 1 . + CDS 877302 - 877745 485 ## COG1522 Transcriptional regulators + Term 877912 - 877940 2.3 - TRNA 878038 - 878122 66.9 # Tyr GTA 0 0 - TRNA 878162 - 878246 66.9 # Tyr GTA 0 0 775 450 Op 1 4/0.265 - CDS 878586 - 879428 1036 ## COG0788 Formyltetrahydrofolate hydrolase 776 450 Op 2 . - CDS 879471 - 879929 220 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 - Prom 879974 - 880033 2.8 777 451 Op 1 4/0.265 + CDS 880042 - 880944 503 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Term 880980 - 881020 -0.5 778 451 Op 2 5/0.153 + CDS 881034 - 882047 695 ## COG0784 FOG: CheY-like receiver + Prom 882055 - 882114 4.5 779 452 Tu 1 . + CDS 882245 - 883147 923 ## COG1210 UDP-glucose pyrophosphorylase + Term 883170 - 883214 10.3 - Term 883217 - 883245 1.0 780 453 Tu 1 . - CDS 883270 - 883677 432 ## COG2916 DNA-binding protein H-NS - Prom 883715 - 883774 5.0 + Prom 884079 - 884138 3.0 781 454 Tu 1 . + CDS 884238 - 884855 489 ## COG1435 Thymidine kinase + Term 884876 - 884903 1.5 - Term 884934 - 884972 6.5 782 455 Tu 1 . - CDS 884993 - 887668 2718 ## COG1454 Alcohol dehydrogenase, class IV + Prom 887641 - 887700 3.2 783 456 Tu 1 . + CDS 887746 - 887961 88 ## KPK_2110 hypothetical protein + Prom 888001 - 888060 4.3 784 457 Tu 1 . + CDS 888145 - 888792 493 ## COG2095 Multiple antibiotic transporter + Term 888803 - 888848 8.6 + Prom 889364 - 889423 1.5 785 458 Op 1 21/0.000 + CDS 889539 - 891173 2147 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 891180 - 891224 8.5 786 458 Op 2 49/0.000 + CDS 891259 - 892179 1224 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 787 458 Op 3 44/0.000 + CDS 892197 - 893102 1511 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 788 458 Op 4 44/0.000 + CDS 893114 - 894127 581 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 789 458 Op 5 1/0.538 + CDS 894124 - 895128 864 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 895135 - 895166 4.1 790 458 Op 6 . + CDS 895177 - 896010 906 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 896029 - 896065 7.5 - Term 896012 - 896058 13.1 791 459 Op 1 1/0.538 - CDS 896074 - 896403 583 ## COG3099 Uncharacterized protein conserved in bacteria 792 459 Op 2 . - CDS 896438 - 897898 1635 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 897927 - 897986 5.8 + Prom 897958 - 898017 6.6 793 460 Tu 1 . + CDS 898042 - 898215 96 ## KP1_3300 hypothetical protein + Term 898223 - 898265 9.6 - Term 898645 - 898678 2.1 794 461 Tu 1 . - CDS 898684 - 899262 499 ## COG2353 Uncharacterized conserved protein - Prom 899432 - 899491 5.5 + Prom 899840 - 899899 12.0 795 462 Tu 1 . + CDS 900043 - 902472 1747 ## COG4993 Glucose dehydrogenase + Term 902498 - 902543 6.4 - Term 902635 - 902682 6.7 796 463 Tu 1 . - CDS 902743 - 903039 284 ## COG2350 Uncharacterized protein conserved in bacteria - Prom 903070 - 903129 2.6 797 464 Tu 1 . - CDS 903323 - 903526 102 ## Kvar_1997 hypothetical protein - Prom 903569 - 903628 2.3 798 465 Tu 1 . - CDS 904026 - 904547 302 ## Kvar_2000 hypothetical protein - Term 904567 - 904624 5.1 799 466 Tu 1 . - CDS 904730 - 904927 169 ## KPK_4418 hypothetical protein - Prom 905050 - 905109 5.0 800 467 Tu 1 . + CDS 905845 - 906162 136 ## KPK_4421 hypothetical protein - Term 906163 - 906200 5.5 801 468 Tu 1 . - CDS 906209 - 906571 301 ## KPK_2127 hypothetical protein - Prom 906686 - 906745 2.8 - Term 906859 - 906893 1.0 802 469 Tu 1 . - CDS 906909 - 907157 126 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Term 907688 - 907722 1.3 803 470 Tu 1 . - CDS 907730 - 908158 158 ## Kvar_2003 hypothetical protein - Prom 908329 - 908388 5.6 804 471 Tu 1 . - CDS 908441 - 908977 123 ## Kvar_2004 resolvase - Prom 909007 - 909066 2.1 + Prom 909863 - 909922 2.5 805 472 Tu 1 . + CDS 910066 - 910839 613 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 910847 - 910885 9.1 806 473 Tu 1 . - CDS 910881 - 911753 970 ## COG3001 Fructosamine-3-kinase - Prom 911774 - 911833 2.1 807 474 Op 1 . - CDS 911859 - 912143 326 ## Kvar_2007 hypothetical protein - Term 912187 - 912228 4.9 808 474 Op 2 . - CDS 912236 - 913168 1071 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) - Prom 913269 - 913328 5.3 + Prom 913311 - 913370 8.8 809 475 Tu 1 . + CDS 913523 - 914281 769 ## COG3137 Putative salt-induced outer membrane protein + Term 914288 - 914323 7.2 + Prom 914322 - 914381 5.5 810 476 Tu 1 . + CDS 914552 - 914785 262 ## Kvar_2010 hypothetical protein + Term 914913 - 914939 0.1 + Prom 914996 - 915055 4.5 811 477 Op 1 16/0.000 + CDS 915278 - 917146 2403 ## COG0441 Threonyl-tRNA synthetase 812 477 Op 2 36/0.000 + CDS 917216 - 917692 656 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 917702 - 917760 15.2 813 478 Op 1 46/0.000 + CDS 917774 - 917986 358 ## PROTEIN SUPPORTED gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 814 478 Op 2 13/0.016 + CDS 918037 - 918393 578 ## PROTEIN SUPPORTED gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 + Term 918405 - 918436 2.1 + Prom 918481 - 918540 3.4 815 479 Op 1 40/0.000 + CDS 918700 - 919683 1447 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 816 479 Op 2 13/0.016 + CDS 919699 - 922086 2980 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 817 479 Op 3 . + CDS 922091 - 922390 318 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 + Term 922408 - 922436 2.1 - Term 922394 - 922422 2.1 818 480 Op 1 3/0.346 - CDS 922443 - 922811 400 ## COG0251 Putative translation initiation inhibitor, yjgF family 819 480 Op 2 3/0.346 - CDS 922793 - 924046 1130 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 820 480 Op 3 . - CDS 924096 - 925010 898 ## COG0583 Transcriptional regulator - Prom 925060 - 925119 4.5 + Prom 925035 - 925094 3.6 821 481 Tu 1 . + CDS 925288 - 926721 1823 ## KPK_2148 citrate transporter family protein + Prom 926760 - 926819 3.0 822 482 Tu 1 . + CDS 926845 - 927831 1189 ## COG4139 ABC-type cobalamin transport system, permease component + Term 927852 - 927901 -0.7 823 483 Tu 1 . - CDS 927868 - 928668 1356 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 928698 - 928757 6.2 + Prom 928662 - 928721 3.7 824 484 Op 1 5/0.153 + CDS 928905 - 929456 903 ## COG0386 Glutathione peroxidase 825 484 Op 2 4/0.265 + CDS 929456 - 930205 711 ## COG4138 ABC-type cobalamin transport system, ATPase component 826 484 Op 3 . + CDS 930287 - 930751 260 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 930768 - 930801 3.8 + Prom 930760 - 930819 2.1 827 485 Tu 1 . + CDS 930865 - 932307 1748 ## COG0397 Uncharacterized conserved protein + Term 932315 - 932348 5.5 828 486 Tu 1 . - CDS 932337 - 932525 254 ## COG4256 Hemin uptake protein - Prom 932547 - 932606 6.0 - Term 932630 - 932664 6.1 829 487 Op 1 . - CDS 932672 - 933718 1133 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 933769 - 933828 2.1 830 487 Op 2 . - CDS 933873 - 934715 1009 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 934786 - 934845 6.7 + Prom 934742 - 934801 7.4 831 488 Tu 1 . + CDS 935046 - 937424 3281 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 937443 - 937476 6.1 - Term 937752 - 937799 7.5 832 489 Tu 1 . - CDS 937806 - 938918 1532 ## COG0628 Predicted permease - Prom 939001 - 939060 6.3 833 490 Op 1 6/0.092 + CDS 939137 - 942193 3860 ## COG0277 FAD/FMN-containing dehydrogenases 834 490 Op 2 . + CDS 942190 - 942600 469 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 942610 - 942640 2.6 + Prom 942708 - 942767 6.4 835 491 Tu 1 . + CDS 942804 - 943052 412 ## COG2261 Predicted membrane protein + Term 943087 - 943121 5.0 - Term 943075 - 943107 4.6 836 492 Tu 1 . - CDS 943150 - 943470 382 ## KP1_3255 hypothetical protein + Prom 943903 - 943962 3.6 837 493 Op 1 . + CDS 944078 - 945058 1009 ## KPK_2167 hypothetical protein 838 493 Op 2 . + CDS 945082 - 946113 1236 ## COG0620 Methionine synthase II (cobalamin-independent) 839 494 Op 1 . - CDS 946198 - 947430 1320 ## COG0477 Permeases of the major facilitator superfamily 840 494 Op 2 35/0.000 - CDS 947442 - 948206 203 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 841 494 Op 3 33/0.000 - CDS 948203 - 949240 1154 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 842 494 Op 4 . - CDS 949240 - 950238 1293 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 950313 - 950372 3.9 + Prom 950272 - 950331 3.2 843 495 Tu 1 . + CDS 950425 - 950643 273 ## Rahaq_2336 hypothetical protein - Term 950544 - 950577 1.1 844 496 Tu 1 . - CDS 950657 - 951568 919 ## COG0583 Transcriptional regulator + Prom 951580 - 951639 1.9 845 497 Op 1 2/0.421 + CDS 951665 - 952660 881 ## COG0451 Nucleoside-diphosphate-sugar epimerases 846 497 Op 2 15/0.014 + CDS 952756 - 953370 660 ## COG1309 Transcriptional regulator 847 497 Op 3 27/0.000 + CDS 953445 - 954554 1184 ## COG0845 Membrane-fusion protein 848 497 Op 4 . + CDS 954551 - 957652 3632 ## COG0841 Cation/multidrug efflux pump 849 498 Tu 1 . - CDS 957709 - 958893 1234 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - Prom 959069 - 959128 7.3 + Prom 959021 - 959080 6.0 850 499 Tu 1 . + CDS 959273 - 959470 261 ## KP1_3238 hypothetical protein + Term 959565 - 959601 4.9 851 500 Tu 1 . - CDS 959336 - 959692 93 ## - Prom 959762 - 959821 4.3 + Prom 959781 - 959840 4.0 852 501 Op 1 3/0.346 + CDS 959944 - 960321 516 ## COG0316 Uncharacterized conserved protein 853 501 Op 2 41/0.000 + CDS 960324 - 961811 1908 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 854 501 Op 3 41/0.000 + CDS 961828 - 962574 1041 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 855 501 Op 4 24/0.000 + CDS 962549 - 963823 1572 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 856 501 Op 5 7/0.057 + CDS 963820 - 965040 1703 ## COG0520 Selenocysteine lyase 857 501 Op 6 4/0.265 + CDS 965052 - 965468 624 ## COG2166 SufE protein probably involved in Fe-S center assembly 858 502 Tu 1 . + CDS 965569 - 966555 1052 ## COG1376 Uncharacterized protein conserved in bacteria + Term 966581 - 966611 4.3 - Term 966569 - 966599 4.3 859 503 Tu 1 . - CDS 966618 - 966854 331 ## COG4238 Murein lipoprotein - Prom 967101 - 967160 7.5 - Term 967106 - 967133 -0.1 860 504 Tu 1 . - CDS 967167 - 968579 2105 ## COG0469 Pyruvate kinase - Prom 968809 - 968868 8.4 + Prom 968833 - 968892 3.6 861 505 Tu 1 . + CDS 969085 - 969297 298 ## Kvar_2143 hypothetical protein + Term 969360 - 969389 -0.4 - Term 969261 - 969299 0.6 862 506 Tu 1 . - CDS 969315 - 969953 836 ## COG1309 Transcriptional regulator - Prom 969993 - 970052 5.8 + Prom 969941 - 970000 4.8 863 507 Op 1 1/0.538 + CDS 970080 - 971933 2103 ## COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 864 507 Op 2 4/0.265 + CDS 972005 - 973327 2080 ## COG0477 Permeases of the major facilitator superfamily 865 507 Op 3 . + CDS 973343 - 974179 1068 ## COG0169 Shikimate 5-dehydrogenase + Term 974192 - 974231 7.0 866 508 Tu 1 . + CDS 974239 - 974979 613 ## COG0725 ABC-type molybdate transport system, periplasmic component + Term 975027 - 975072 2.3 867 509 Op 1 35/0.000 - CDS 974963 - 975712 187 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 868 509 Op 2 33/0.000 - CDS 975709 - 976716 1194 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 869 509 Op 3 . - CDS 976706 - 977764 1393 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 977794 - 977853 4.7 870 509 Op 4 . - CDS 977857 - 978669 998 ## COG1414 Transcriptional regulator - Prom 978763 - 978822 7.2 + Prom 978711 - 978770 6.1 871 510 Op 1 . + CDS 978847 - 980511 2306 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 872 510 Op 2 . + CDS 980513 - 981457 1119 ## KPK_2202 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.-) 873 510 Op 3 1/0.538 + CDS 981475 - 982341 1113 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 874 510 Op 4 4/0.265 + CDS 982352 - 983158 1275 ## COG3971 2-keto-4-pentenoate hydratase 875 510 Op 5 6/0.092 + CDS 983151 - 984101 1229 ## COG4569 Acetaldehyde dehydrogenase (acetylating) 876 510 Op 6 1/0.538 + CDS 984098 - 985114 1601 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 877 511 Tu 1 . + CDS 985250 - 986386 1721 ## COG0477 Permeases of the major facilitator superfamily + Prom 986406 - 986465 2.5 878 512 Tu 1 . + CDS 986489 - 987214 794 ## COG1496 Uncharacterized conserved protein 879 513 Tu 1 5/0.153 - CDS 987227 - 987724 616 ## COG0607 Rhodanese-related sulfurtransferase - Prom 987927 - 987986 80.3 880 514 Op 1 1/0.538 - CDS 987988 - 989037 1224 ## COG0607 Rhodanese-related sulfurtransferase 881 514 Op 2 . - CDS 989043 - 989645 781 ## COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily - Prom 989702 - 989761 3.5 + Prom 989645 - 989704 3.0 882 515 Tu 1 . + CDS 989728 - 990645 1026 ## COG0583 Transcriptional regulator + Prom 990647 - 990706 4.5 883 516 Op 1 4/0.265 + CDS 990790 - 991875 1447 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 884 516 Op 2 2/0.421 + CDS 991872 - 993023 1106 ## COG1960 Acyl-CoA dehydrogenases 885 516 Op 3 . + CDS 993029 - 993991 1423 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 886 516 Op 4 . + CDS 993988 - 995025 1409 ## Kvar_2167 ABC transporter periplasmic substrate-binding protein 887 516 Op 5 24/0.000 + CDS 995006 - 996001 1468 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 888 516 Op 6 . + CDS 995995 - 996783 196 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 997013 - 997049 0.6 - Term 996819 - 996860 2.5 889 517 Tu 1 . - CDS 996893 - 999016 1064 ## PROTEIN SUPPORTED gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor - Prom 999105 - 999164 3.6 + Prom 999338 - 999397 4.0 890 518 Op 1 35/0.000 + CDS 999438 - 1000292 226 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 891 518 Op 2 20/0.000 + CDS 1000289 - 1000588 454 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Prom 1000890 - 1000949 80.3 892 519 Op 1 20/0.000 + CDS 1001063 - 1001656 786 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 893 519 Op 2 33/0.000 + CDS 1001653 - 1002705 1358 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 894 519 Op 3 2/0.421 + CDS 1002719 - 1003672 1168 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 895 519 Op 4 . + CDS 1003669 - 1004571 1185 ## COG1737 Transcriptional regulators + Prom 1004579 - 1004638 5.9 896 520 Op 1 31/0.000 + CDS 1004697 - 1005431 1106 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 1005452 - 1005487 7.4 897 520 Op 2 34/0.000 + CDS 1005495 - 1006259 1106 ## COG0765 ABC-type amino acid transport system, permease component 898 520 Op 3 . + CDS 1006237 - 1006968 584 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 1007114 - 1007142 -0.0 - Term 1006775 - 1006801 -1.0 899 521 Tu 1 . - CDS 1007034 - 1007426 156 ## COG0251 Putative translation initiation inhibitor, yjgF family 900 522 Op 1 9/0.037 - CDS 1007547 - 1009028 658 ## COG0477 Permeases of the major facilitator superfamily 901 522 Op 2 . - CDS 1009090 - 1009836 234 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 1009899 - 1009958 1.8 + Prom 1009880 - 1009939 5.0 902 523 Tu 1 . + CDS 1009965 - 1010834 521 ## COG0583 Transcriptional regulator 903 524 Op 1 . - CDS 1010837 - 1011376 273 ## COG3038 Cytochrome B561 904 524 Op 2 . - CDS 1011373 - 1012428 342 ## COG0753 Catalase 905 524 Op 3 . - CDS 1012476 - 1013048 16 ## KPK_2234 hypothetical protein - Prom 1013103 - 1013162 2.2 - Term 1013207 - 1013246 7.8 906 525 Tu 1 . - CDS 1013248 - 1013832 270 ## COG1309 Transcriptional regulator - Prom 1013893 - 1013952 1.9 907 526 Op 1 1/0.538 - CDS 1013975 - 1014367 367 ## COG0346 Lactoylglutathione lyase and related lyases 908 526 Op 2 . - CDS 1014453 - 1015652 1699 ## COG0477 Permeases of the major facilitator superfamily - Prom 1015708 - 1015767 3.7 + Prom 1015667 - 1015726 3.5 909 527 Tu 1 . + CDS 1015949 - 1017106 1600 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 1017158 - 1017191 2.6 - Term 1017078 - 1017118 10.1 910 528 Tu 1 . - CDS 1017149 - 1019299 2830 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 911 529 Tu 1 . - CDS 1019763 - 1020638 1183 ## COG2055 Malate/L-lactate dehydrogenases - Prom 1020788 - 1020847 4.7 + Prom 1020779 - 1020838 4.8 912 530 Op 1 21/0.000 + CDS 1020942 - 1022030 1491 ## COG1840 ABC-type Fe3+ transport system, periplasmic component + Term 1022040 - 1022070 4.3 913 530 Op 2 17/0.000 + CDS 1022105 - 1023874 2668 ## COG1178 ABC-type Fe3+ transport system, permease component 914 530 Op 3 . + CDS 1023867 - 1024937 1435 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 915 531 Tu 1 . + CDS 1025422 - 1026105 662 ## Kvar_2189 hypothetical protein + Term 1026132 - 1026161 1.4 916 532 Tu 1 . - CDS 1026166 - 1026537 505 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 1026597 - 1026656 5.0 917 533 Op 1 . + CDS 1027041 - 1027793 921 ## KPK_2249 gluconate 2-dehydrogenase, subunit 3 (EC:1.1.99.3) 918 533 Op 2 2/0.421 + CDS 1027796 - 1029580 2758 ## COG2303 Choline dehydrogenase and related flavoproteins 919 533 Op 3 . + CDS 1029594 - 1030931 1706 ## COG2010 Cytochrome c, mono- and diheme variants 920 533 Op 4 14/0.014 + CDS 1031015 - 1031638 735 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component 921 533 Op 5 14/0.014 + CDS 1031638 - 1032294 1112 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 922 533 Op 6 9/0.037 + CDS 1032344 - 1033081 1014 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 923 533 Op 7 9/0.037 + CDS 1033078 - 1033308 308 ## COG3114 Heme exporter protein D 924 533 Op 8 16/0.000 + CDS 1033292 - 1033750 859 ## COG2332 Cytochrome c-type biogenesis protein CcmE 925 533 Op 9 11/0.023 + CDS 1033747 - 1035699 3068 ## COG1138 Cytochrome c biogenesis factor 926 533 Op 10 10/0.030 + CDS 1035696 - 1036250 722 ## COG0526 Thiol-disulfide isomerase and thioredoxins 927 533 Op 11 9/0.037 + CDS 1036250 - 1036708 663 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 928 533 Op 12 . + CDS 1036705 - 1037547 1147 ## COG4235 Cytochrome c biogenesis factor + Term 1037684 - 1037727 3.7 - Term 1037656 - 1037708 -1.0 929 534 Op 1 8/0.039 - CDS 1037813 - 1038331 356 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 930 534 Op 2 2/0.421 - CDS 1038357 - 1038818 122 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 931 534 Op 3 . - CDS 1038881 - 1039483 292 ## COG1396 Predicted transcriptional regulators - Prom 1039512 - 1039571 4.6 + Prom 1039444 - 1039503 6.5 932 535 Tu 1 . + CDS 1039527 - 1040222 302 ## COG3382 Uncharacterized conserved protein 933 536 Tu 1 . + CDS 1040354 - 1040770 256 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Prom 1041676 - 1041735 5.4 934 537 Tu 1 . + CDS 1041921 - 1042544 -97 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 935 538 Tu 1 . - CDS 1042920 - 1043240 60 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 936 539 Tu 1 . - CDS 1043946 - 1044188 85 ## - Prom 1044211 - 1044270 1.6 + Prom 1044346 - 1044405 1.6 937 540 Tu 1 . + CDS 1044486 - 1044875 147 ## COG0583 Transcriptional regulator + Prom 1045300 - 1045359 10.3 938 541 Tu 1 . + CDS 1045549 - 1046676 1163 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Term 1046707 - 1046740 4.4 939 542 Op 1 5/0.153 - CDS 1046766 - 1047536 1254 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 940 542 Op 2 3/0.346 - CDS 1047560 - 1049239 2434 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 941 542 Op 3 . - CDS 1049249 - 1050028 1017 ## COG3527 Alpha-acetolactate decarboxylase - Prom 1050064 - 1050123 2.7 + Prom 1049909 - 1049968 2.6 942 543 Tu 1 . + CDS 1050135 - 1051007 928 ## COG0583 Transcriptional regulator 943 544 Op 1 5/0.153 - CDS 1051027 - 1051797 1121 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 944 544 Op 2 . - CDS 1051821 - 1053212 2088 ## COG2610 H+/gluconate symporter and related permeases 945 544 Op 3 20/0.000 - CDS 1053260 - 1054183 1129 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 946 544 Op 4 7/0.057 - CDS 1054195 - 1055376 1456 ## COG0183 Acetyl-CoA acetyltransferase 947 544 Op 5 21/0.000 - CDS 1055386 - 1056042 870 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 948 544 Op 6 . - CDS 1056044 - 1056751 1086 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 1056833 - 1056892 7.7 + Prom 1056808 - 1056867 8.9 949 545 Tu 1 . + CDS 1056892 - 1057782 1085 ## COG0583 Transcriptional regulator + Term 1057806 - 1057833 1.5 - Term 1057794 - 1057821 1.5 950 546 Tu 1 . - CDS 1057830 - 1057970 229 ## - Prom 1057996 - 1058055 1.6 + Prom 1058172 - 1058231 5.7 951 547 Tu 1 . + CDS 1058261 - 1059169 783 ## COG2990 Uncharacterized protein conserved in bacteria + Term 1059181 - 1059230 11.3 952 548 Tu 1 . - CDS 1059252 - 1060469 1335 ## COG0477 Permeases of the major facilitator superfamily 953 549 Tu 1 . - CDS 1060647 - 1061108 632 ## COG1733 Predicted transcriptional regulators - Prom 1061154 - 1061213 3.9 + Prom 1061078 - 1061137 6.2 954 550 Op 1 . + CDS 1061169 - 1061417 332 ## Kvar_2228 4-oxalocrotonate tautomerase + Prom 1061472 - 1061531 1.6 955 550 Op 2 . + CDS 1061604 - 1062797 1484 ## COG0477 Permeases of the major facilitator superfamily + Term 1062802 - 1062837 5.0 + Prom 1062805 - 1062864 3.0 956 551 Op 1 2/0.421 + CDS 1062926 - 1063885 963 ## COG4275 Uncharacterized conserved protein 957 551 Op 2 . + CDS 1063854 - 1065221 1483 ## COG2059 Chromate transport protein ChrA 958 552 Op 1 . - CDS 1065312 - 1065650 331 ## Kvar_2232 hypothetical protein 959 552 Op 2 . - CDS 1065647 - 1066075 468 ## Kvar_2233 hypothetical protein 960 552 Op 3 . - CDS 1066077 - 1066553 421 ## KPN_02043 hypothetical protein - Prom 1066580 - 1066639 4.4 - Term 1066883 - 1066925 -0.4 961 553 Op 1 . - CDS 1066937 - 1068355 1789 ## COG0277 FAD/FMN-containing dehydrogenases 962 553 Op 2 24/0.000 - CDS 1068385 - 1069200 1344 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 963 553 Op 3 17/0.000 - CDS 1069202 - 1070032 291 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 964 553 Op 4 . - CDS 1070029 - 1071012 1392 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 965 553 Op 5 1/0.538 - CDS 1071012 - 1071893 933 ## COG1402 Uncharacterized protein, putative amidase 966 553 Op 6 . - CDS 1071890 - 1072369 494 ## COG0251 Putative translation initiation inhibitor, yjgF family 967 553 Op 7 . - CDS 1072359 - 1073642 1289 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 968 553 Op 8 . - CDS 1073654 - 1074622 532 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 969 554 Tu 1 . + CDS 1074830 - 1075729 1022 ## COG0583 Transcriptional regulator + Term 1075762 - 1075792 1.1 + Prom 1075810 - 1075869 2.1 970 555 Op 1 . + CDS 1076015 - 1077004 1274 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 971 555 Op 2 . + CDS 1077016 - 1078434 1906 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 972 555 Op 3 . + CDS 1078455 - 1079444 1171 ## COG3491 Isopenicillin N synthase and related dioxygenases 973 556 Op 1 . - CDS 1079460 - 1080242 604 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 1080274 - 1080333 3.7 974 556 Op 2 3/0.346 - CDS 1080335 - 1081672 1459 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 975 556 Op 3 . - CDS 1081662 - 1082693 790 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 976 557 Op 1 7/0.057 + CDS 1083146 - 1083916 188 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 977 557 Op 2 . + CDS 1083931 - 1085457 1643 ## COG0531 Amino acid transporters + Term 1085484 - 1085525 1.4 978 558 Tu 1 . - CDS 1085519 - 1086436 717 ## COG0583 Transcriptional regulator - Prom 1086466 - 1086525 2.3 + Prom 1086444 - 1086503 1.8 979 559 Tu 1 . + CDS 1086553 - 1088085 1018 ## COG0477 Permeases of the major facilitator superfamily 980 560 Tu 1 . + CDS 1088229 - 1089302 1071 ## KPK_2311 transcriptional regulator, LuxR family 981 561 Tu 1 . - CDS 1089316 - 1089804 614 ## COG2318 Uncharacterized protein conserved in bacteria - Prom 1089834 - 1089893 3.9 - Term 1089872 - 1089902 3.0 982 562 Tu 1 . - CDS 1089922 - 1090440 570 ## Kvar_2271 hypothetical protein - Prom 1090468 - 1090527 5.0 - Term 1090685 - 1090722 -0.4 983 563 Op 1 44/0.000 - CDS 1090818 - 1091789 1227 ## COG4608 ABC-type oligopeptide transport system, ATPase component 984 563 Op 2 44/0.000 - CDS 1091786 - 1092766 534 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 985 563 Op 3 49/0.000 - CDS 1092763 - 1093710 1194 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 986 563 Op 4 38/0.000 - CDS 1093710 - 1094669 1396 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 987 563 Op 5 . - CDS 1094715 - 1096418 2033 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 1096461 - 1096520 3.2 988 564 Op 1 10/0.030 - CDS 1096567 - 1097610 1224 ## COG1135 ABC-type metal ion transport system, ATPase component 989 564 Op 2 22/0.000 - CDS 1097663 - 1098439 1085 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 990 564 Op 3 . - CDS 1098471 - 1099145 934 ## COG2011 ABC-type metal ion transport system, permease component 991 564 Op 4 . - CDS 1099147 - 1100370 1717 ## COG1960 Acyl-CoA dehydrogenases - Prom 1100421 - 1100480 5.7 - Term 1100583 - 1100626 1.0 992 565 Op 1 . - CDS 1100644 - 1101327 447 ## COG4845 Chloramphenicol O-acetyltransferase 993 565 Op 2 . - CDS 1101359 - 1101742 455 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 1101833 - 1101892 4.4 + Prom 1101744 - 1101803 3.4 994 566 Tu 1 . + CDS 1101833 - 1102603 789 ## COG1349 Transcriptional regulators of sugar metabolism - Term 1102534 - 1102591 10.1 995 567 Tu 1 . - CDS 1102608 - 1103237 851 ## COG1280 Putative threonine efflux protein - Prom 1103417 - 1103476 3.6 + Prom 1103381 - 1103440 5.4 996 568 Tu 1 . + CDS 1103487 - 1104122 807 ## COG0288 Carbonic anhydrase + Term 1104256 - 1104305 0.4 - Term 1104057 - 1104094 -1.0 997 569 Tu 1 . - CDS 1104159 - 1105172 855 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 1105227 - 1105286 2.9 - Term 1105267 - 1105297 3.0 998 570 Tu 1 . - CDS 1105324 - 1105533 271 ## - Prom 1105577 - 1105636 1.6 999 571 Op 1 . - CDS 1105640 - 1106332 266 ## KPK_2330 hypothetical protein 1000 571 Op 2 . - CDS 1106378 - 1106812 187 ## KPK_2331 hypothetical protein - Prom 1106887 - 1106946 4.9 1001 572 Tu 1 . + CDS 1107214 - 1107363 138 ## KP1_3086 hypothetical protein - Term 1107378 - 1107419 10.1 1002 573 Op 1 . - CDS 1107435 - 1108271 651 ## COG0491 Zn-dependent hydrolases, including glyoxylases 1003 573 Op 2 . - CDS 1108279 - 1108794 324 ## KPK_2334 hypothetical protein - Prom 1108844 - 1108903 2.4 + Prom 1108858 - 1108917 2.1 1004 574 Tu 1 . + CDS 1108951 - 1109835 976 ## COG0583 Transcriptional regulator + Term 1109866 - 1109891 -0.5 1005 575 Tu 1 . - CDS 1109832 - 1110758 1142 ## COG2207 AraC-type DNA-binding domain-containing proteins 1006 576 Tu 1 . + CDS 1110857 - 1111609 604 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 1111634 - 1111675 1.1 + Prom 1112206 - 1112265 3.7 1007 577 Op 1 . + CDS 1112505 - 1114793 1516 ## COG3501 Uncharacterized protein conserved in bacteria 1008 577 Op 2 . + CDS 1114803 - 1116485 1100 ## Ctu_19480 hypothetical protein + Prom 1117282 - 1117341 5.7 1009 578 Tu 1 . + CDS 1117585 - 1118112 -100 ## Dda3937_03228 hypothetical protein + Prom 1118384 - 1118443 5.5 1010 579 Op 1 . + CDS 1118474 - 1118848 184 ## Ctu_19480 hypothetical protein 1011 579 Op 2 . + CDS 1118836 - 1119324 209 ## - TRNA 1118837 - 1118913 96.5 # Val GAC 0 0 - TRNA 1118918 - 1118994 92.5 # Val GAC 0 0 - TRNA 1118999 - 1119075 93.1 # Val GAC 0 0 1012 579 Op 3 . + CDS 1119330 - 1119908 733 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 1120005 - 1120036 3.1 1013 580 Op 1 . - CDS 1119901 - 1119984 109 ## - Term 1119993 - 1120024 3.1 1014 580 Op 2 . - CDS 1120049 - 1120456 173 ## - Prom 1120561 - 1120620 1.9 - Term 1120593 - 1120623 3.3 1015 581 Tu 1 . - CDS 1120634 - 1122007 1637 ## COG0534 Na+-driven multidrug efflux pump - Prom 1122088 - 1122147 4.8 + Prom 1122130 - 1122189 2.2 1016 582 Tu 1 . + CDS 1122237 - 1122872 889 ## COG0307 Riboflavin synthase alpha chain + Term 1122879 - 1122914 5.0 - Term 1122867 - 1122900 5.2 1017 583 Tu 1 . - CDS 1122908 - 1124056 1074 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases - Prom 1124264 - 1124323 7.0 - Term 1124116 - 1124146 2.0 1018 584 Tu 1 . - CDS 1124350 - 1125531 1656 ## COG0477 Permeases of the major facilitator superfamily + Prom 1125490 - 1125549 2.8 1019 585 Tu 1 . + CDS 1125644 - 1126555 1013 ## COG0583 Transcriptional regulator 1020 586 Tu 1 . - CDS 1126575 - 1127600 1250 ## COG1609 Transcriptional regulators - Prom 1127671 - 1127730 3.2 1021 587 Tu 1 . + CDS 1127896 - 1127985 98 ## + Prom 1128036 - 1128095 3.7 1022 588 Tu 1 . + CDS 1128153 - 1129319 1324 ## COG2814 Arabinose efflux permease + Term 1129347 - 1129384 6.6 - Term 1129335 - 1129372 5.4 1023 589 Tu 1 . - CDS 1129381 - 1129962 457 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Prom 1130284 - 1130343 5.9 1024 590 Tu 1 . + CDS 1130445 - 1130930 216 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 1130829 - 1130867 -0.8 1025 591 Tu 1 . - CDS 1130885 - 1131757 200 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 1131961 - 1132020 5.6 + Prom 1131803 - 1131862 5.2 1026 592 Tu 1 . + CDS 1132098 - 1132445 484 ## COG0278 Glutaredoxin-related protein + Term 1132466 - 1132498 4.0 - Term 1132452 - 1132484 4.0 1027 593 Tu 1 . - CDS 1132492 - 1133139 901 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 1133165 - 1133224 3.1 - Term 1133208 - 1133237 3.5 1028 594 Op 1 4/0.265 - CDS 1133277 - 1133684 216 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase - Term 1133709 - 1133754 1.5 1029 594 Op 2 6/0.092 - CDS 1133763 - 1134860 1402 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 1030 594 Op 3 . - CDS 1134914 - 1135513 594 ## COG1309 Transcriptional regulator - Prom 1135557 - 1135616 3.9 1031 595 Op 1 4/0.265 + CDS 1135656 - 1135895 224 ## COG3313 Predicted Fe-S protein 1032 595 Op 2 3/0.346 + CDS 1135944 - 1136840 1255 ## COG4989 Predicted oxidoreductase + Term 1136946 - 1136989 2.5 + Prom 1136859 - 1136918 1.7 1033 596 Tu 1 . + CDS 1136994 - 1137431 556 ## COG2032 Cu/Zn superoxide dismutase - Term 1137356 - 1137413 3.6 1034 597 Op 1 6/0.092 - CDS 1137424 - 1139358 1920 ## COG1289 Predicted membrane protein 1035 597 Op 2 . - CDS 1139448 - 1140344 1147 ## COG1566 Multidrug resistance efflux pump 1036 597 Op 3 . - CDS 1140355 - 1140591 323 ## Kvar_2321 hypothetical protein - Prom 1140713 - 1140772 10.8 + Prom 1140677 - 1140736 7.6 1037 598 Tu 1 . + CDS 1140764 - 1141204 382 ## COG1846 Transcriptional regulators + Term 1141212 - 1141245 7.5 1038 599 Tu 1 . - CDS 1141240 - 1142601 1066 ## COG2199 FOG: GGDEF domain - Prom 1142723 - 1142782 4.0 - Term 1142774 - 1142814 7.2 1039 600 Tu 1 . - CDS 1142822 - 1143289 424 ## COG3133 Outer membrane lipoprotein - Prom 1143472 - 1143531 5.5 + Prom 1143373 - 1143432 4.5 1040 601 Op 1 3/0.346 + CDS 1143558 - 1144682 1249 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 1041 601 Op 2 3/0.346 + CDS 1144730 - 1145098 435 ## COG3895 Predicted periplasmic protein 1042 601 Op 3 5/0.153 + CDS 1145150 - 1145812 672 ## COG0259 Pyridoxamine-phosphate oxidase + Term 1145831 - 1145873 7.0 + Prom 1145814 - 1145873 3.7 1043 602 Op 1 5/0.153 + CDS 1145937 - 1147211 822 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 1147224 - 1147256 5.0 1044 602 Op 2 . + CDS 1147272 - 1148132 1210 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 1148136 - 1148185 9.2 1045 603 Tu 1 . - CDS 1148175 - 1148780 885 ## COG0625 Glutathione S-transferase - Prom 1148804 - 1148863 5.0 - Term 1148828 - 1148862 5.2 1046 604 Tu 1 . - CDS 1148891 - 1150363 2105 ## COG3104 Dipeptide/tripeptide permease - Term 1150942 - 1150990 10.8 1047 605 Op 1 10/0.030 - CDS 1150998 - 1151633 777 ## COG0177 Predicted EndoIII-related endonuclease 1048 605 Op 2 13/0.016 - CDS 1151635 - 1152333 974 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 1049 605 Op 3 12/0.016 - CDS 1152336 - 1152956 590 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 1050 605 Op 4 12/0.016 - CDS 1152967 - 1154019 1473 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 1051 606 Op 1 10/0.030 - CDS 1154660 - 1156321 1837 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 1052 606 Op 2 12/0.016 - CDS 1156314 - 1156892 571 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 1053 606 Op 3 . - CDS 1156892 - 1157473 850 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 1054 606 Op 4 . - CDS 1157552 - 1157992 369 ## KPN_01963 putative oxidoreductase 1055 606 Op 5 . - CDS 1158068 - 1158283 210 ## Kvar_2340 hemolysin expression modulating family protein - Prom 1158313 - 1158372 2.6 1056 607 Tu 1 . - CDS 1158501 - 1159871 1616 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Prom 1160212 - 1160271 2.9 1057 608 Tu 1 . + CDS 1160315 - 1161355 935 ## COG0673 Predicted dehydrogenases and related proteins 1058 609 Tu 1 . - CDS 1161391 - 1162392 1165 ## COG1816 Adenosine deaminase - Prom 1162419 - 1162478 8.0 - Term 1162407 - 1162438 -1.0 1059 610 Tu 1 . - CDS 1162550 - 1163578 744 ## COG0477 Permeases of the major facilitator superfamily - Prom 1163800 - 1163859 4.9 + Prom 1163758 - 1163817 5.3 1060 611 Tu 1 . + CDS 1163893 - 1164357 408 ## COG1733 Predicted transcriptional regulators + Prom 1164510 - 1164569 9.7 1061 612 Tu 1 . + CDS 1164600 - 1164785 159 ## Kvar_2347 hypothetical protein 1062 613 Tu 1 . - CDS 1164795 - 1165163 239 ## Kvar_2348 hypothetical protein - Prom 1165345 - 1165404 2.1 + Prom 1165205 - 1165264 3.0 1063 614 Tu 1 . + CDS 1165426 - 1165953 506 ## COG3038 Cytochrome B561 + Term 1165976 - 1166009 4.5 + Prom 1165971 - 1166030 4.5 1064 615 Op 1 2/0.421 + CDS 1166060 - 1166335 248 ## COG1937 Uncharacterized protein conserved in bacteria 1065 615 Op 2 . + CDS 1166360 - 1167478 1551 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 1167517 - 1167544 1.5 - Term 1167500 - 1167538 4.3 1066 616 Tu 1 . - CDS 1167548 - 1169920 2860 ## COG4993 Glucose dehydrogenase - Prom 1170065 - 1170124 4.7 1067 617 Tu 1 . - CDS 1170217 - 1171140 909 ## COG0583 Transcriptional regulator - Prom 1171209 - 1171268 3.4 - Term 1171257 - 1171299 13.1 1068 618 Op 1 8/0.039 - CDS 1171316 - 1171936 778 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit 1069 618 Op 2 . - CDS 1171933 - 1172673 883 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit - Prom 1172742 - 1172801 2.2 + Prom 1172744 - 1172803 4.8 1070 619 Op 1 1/0.538 + CDS 1172913 - 1174256 1523 ## COG5383 Uncharacterized protein conserved in bacteria 1071 619 Op 2 . + CDS 1174298 - 1175803 1677 ## COG2272 Carboxylesterase type B + Term 1175957 - 1175983 -0.6 1072 620 Tu 1 . - CDS 1175858 - 1176946 1324 ## COG1062 Zn-dependent alcohol dehydrogenases, class III - Prom 1177042 - 1177101 3.8 + Prom 1177239 - 1177298 2.3 1073 621 Op 1 . + CDS 1177416 - 1179041 2128 ## COG3131 Periplasmic glucans biosynthesis protein 1074 621 Op 2 . + CDS 1179095 - 1179673 208 ## PROTEIN SUPPORTED gi|228004629|ref|ZP_04051602.1| acetyltransferase, ribosomal protein N-acetylase - Term 1179413 - 1179459 1.4 1075 622 Tu 1 . - CDS 1179659 - 1180639 996 ## Kvar_2361 hypothetical protein - Prom 1180719 - 1180778 2.9 + Prom 1180665 - 1180724 3.9 1076 623 Op 1 4/0.265 + CDS 1180751 - 1181755 977 ## COG1275 Tellurite resistance protein and related permeases 1077 623 Op 2 . + CDS 1181752 - 1182348 704 ## COG0500 SAM-dependent methyltransferases + Prom 1182496 - 1182555 2.6 1078 624 Tu 1 . + CDS 1182609 - 1183277 964 ## KPK_2411 putative lipoprotein + Term 1183284 - 1183319 8.1 1079 625 Tu 1 . - CDS 1183324 - 1184220 1005 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 1184319 - 1184378 1.9 1080 626 Tu 1 . + CDS 1184402 - 1185271 792 ## COG2207 AraC-type DNA-binding domain-containing proteins 1081 627 Tu 1 . - CDS 1185248 - 1186414 1344 ## COG3135 Uncharacterized protein involved in benzoate metabolism - Prom 1186439 - 1186498 2.5 + Prom 1186489 - 1186548 3.7 1082 628 Tu 1 . + CDS 1186588 - 1187157 697 ## COG1396 Predicted transcriptional regulators 1083 629 Tu 1 . + CDS 1187306 - 1189330 2418 ## COG0826 Collagenase and related proteases 1084 630 Tu 1 . - CDS 1189343 - 1189561 335 ## KPK_2418 hypothetical protein - Term 1189686 - 1189718 2.2 1085 631 Tu 1 . - CDS 1189727 - 1190032 187 ## KPK_2419 hypothetical protein - Term 1190075 - 1190126 5.8 1086 632 Op 1 . - CDS 1190128 - 1190253 217 ## 1087 632 Op 2 31/0.000 - CDS 1190253 - 1191263 1476 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 1088 632 Op 3 . - CDS 1191263 - 1192660 1731 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 1192736 - 1192795 5.1 + Prom 1193044 - 1193103 9.4 1089 633 Op 1 . + CDS 1193124 - 1193222 119 ## + Prom 1193233 - 1193292 5.3 1090 633 Op 2 3/0.346 + CDS 1193312 - 1194754 1798 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 1194847 - 1194906 3.8 1091 634 Op 1 13/0.016 + CDS 1195060 - 1196205 1526 ## COG0687 Spermidine/putrescine-binding periplasmic protein 1092 634 Op 2 30/0.000 + CDS 1196222 - 1197235 1199 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 1093 634 Op 3 36/0.000 + CDS 1197237 - 1198166 1294 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 1094 634 Op 4 5/0.153 + CDS 1198156 - 1198962 885 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 1095 634 Op 5 . + CDS 1198985 - 1200412 1564 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 1200653 - 1200686 5.2 1096 635 Tu 1 . - CDS 1200745 - 1200903 75 ## KP1_2988 hypothetical protein - Prom 1201121 - 1201180 3.9 + Prom 1201273 - 1201332 2.8 1097 636 Tu 1 . + CDS 1201360 - 1201611 178 ## KPK_2430 hypothetical protein + Term 1201616 - 1201646 3.0 + Prom 1201742 - 1201801 3.1 1098 637 Op 1 . + CDS 1201952 - 1202125 305 ## KP1_2985 hypothetical protein + Prom 1202129 - 1202188 3.1 1099 637 Op 2 . + CDS 1202213 - 1202962 561 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Term 1202702 - 1202743 -0.9 1100 638 Tu 1 . - CDS 1202975 - 1204408 1550 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 1204592 - 1204651 2.0 1101 639 Op 1 . + CDS 1204678 - 1206276 2277 ## COG0747 ABC-type dipeptide transport system, periplasmic component 1102 639 Op 2 . + CDS 1206293 - 1206526 339 ## Kvar_2389 hypothetical protein - Term 1206499 - 1206534 3.6 1103 640 Op 1 4/0.265 - CDS 1206535 - 1206984 525 ## COG3238 Uncharacterized protein conserved in bacteria 1104 640 Op 2 . - CDS 1206981 - 1207499 676 ## COG1247 Sortase and related acyltransferases - Prom 1207644 - 1207703 2.7 + Prom 1207472 - 1207531 3.2 1105 641 Op 1 . + CDS 1207662 - 1208243 587 ## COG1396 Predicted transcriptional regulators 1106 641 Op 2 . + CDS 1208309 - 1209346 1099 ## COG2130 Putative NADP-dependent oxidoreductases 1107 642 Tu 1 . - CDS 1209409 - 1210344 1339 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 1210527 - 1210586 2.1 + Prom 1210547 - 1210606 2.9 1108 643 Tu 1 . + CDS 1210626 - 1210925 313 ## COG3691 Uncharacterized protein conserved in bacteria + Term 1210953 - 1211007 5.3 1109 644 Tu 1 . - CDS 1210998 - 1213103 2683 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 1213139 - 1213198 4.9 + Prom 1213222 - 1213281 4.6 1110 645 Tu 1 . + CDS 1213363 - 1214424 1488 ## COG3391 Uncharacterized conserved protein + Prom 1214481 - 1214540 1.6 1111 646 Tu 1 . + CDS 1214581 - 1214802 301 ## Kvar_2398 hypothetical protein - Term 1214794 - 1214846 10.9 1112 647 Op 1 . - CDS 1214853 - 1216307 2090 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 1216381 - 1216440 2.5 1113 647 Op 2 . - CDS 1216497 - 1217384 945 ## COG0583 Transcriptional regulator - Prom 1217418 - 1217477 2.2 + Prom 1217492 - 1217551 4.7 1114 648 Tu 1 . + CDS 1217580 - 1218446 667 ## COG0253 Diaminopimelate epimerase + Term 1218556 - 1218595 -0.4 - Term 1218368 - 1218396 -1.0 1115 649 Tu 1 . - CDS 1218470 - 1219165 159 ## COG0500 SAM-dependent methyltransferases - Prom 1219194 - 1219253 2.2 + Prom 1219169 - 1219228 4.5 1116 650 Op 1 . + CDS 1219261 - 1219812 424 ## COG0563 Adenylate kinase and related kinases + Prom 1219820 - 1219879 4.2 1117 650 Op 2 1/0.538 + CDS 1219904 - 1220911 1081 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 1118 650 Op 3 1/0.538 + CDS 1220901 - 1222022 1476 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1119 650 Op 4 . + CDS 1222047 - 1223360 1192 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 1120 650 Op 5 5/0.153 + CDS 1223378 - 1224310 1437 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1121 650 Op 6 1/0.538 + CDS 1224322 - 1224831 730 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1122 650 Op 7 34/0.000 + CDS 1224841 - 1225767 1417 ## COG0765 ABC-type amino acid transport system, permease component 1123 650 Op 8 16/0.000 + CDS 1225751 - 1226530 258 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 1124 650 Op 9 . + CDS 1226527 - 1227420 1108 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Term 1227413 - 1227459 9.1 1125 651 Op 1 . - CDS 1227486 - 1228796 1643 ## COG0477 Permeases of the major facilitator superfamily 1126 651 Op 2 . - CDS 1229001 - 1230197 1609 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 1230368 - 1230427 3.6 1127 652 Op 1 . + CDS 1230502 - 1231506 1033 ## COG1609 Transcriptional regulators 1128 652 Op 2 . + CDS 1231590 - 1232207 783 ## COG0625 Glutathione S-transferase 1129 652 Op 3 . + CDS 1232278 - 1232505 363 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 1130 653 Op 1 . - CDS 1232545 - 1234155 1912 ## COG4580 Maltoporin (phage lambda and maltose receptor) 1131 653 Op 2 . - CDS 1234198 - 1235574 2108 ## COG2211 Na+/melibiose symporter and related transporters 1132 653 Op 3 . - CDS 1235598 - 1237166 1721 ## KPK_2466 alpha-L-rhamnosidase family protein + Prom 1237117 - 1237176 1.5 1133 654 Tu 1 . + CDS 1237371 - 1238195 912 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 1238189 - 1238242 6.9 1134 655 Tu 1 . - CDS 1238252 - 1238833 747 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Prom 1238820 - 1238879 3.2 1135 656 Op 1 2/0.421 + CDS 1239048 - 1239749 195 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 1136 656 Op 2 21/0.000 + CDS 1239746 - 1240714 1300 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 1137 656 Op 3 . + CDS 1240773 - 1242428 2243 ## COG1178 ABC-type Fe3+ transport system, permease component 1138 656 Op 4 . + CDS 1242505 - 1243350 1184 ## COG2162 Arylamine N-acetyltransferase 1139 657 Tu 1 . - CDS 1243539 - 1244114 583 ## COG1309 Transcriptional regulator - Prom 1244137 - 1244196 2.8 + Prom 1244135 - 1244194 1.5 1140 658 Tu 1 . + CDS 1244234 - 1245733 2117 ## COG0477 Permeases of the major facilitator superfamily + Term 1245741 - 1245794 7.0 1141 659 Tu 1 . - CDS 1245728 - 1246525 935 ## COG1414 Transcriptional regulator - Prom 1246599 - 1246658 4.1 + Prom 1246607 - 1246666 2.0 1142 660 Op 1 1/0.538 + CDS 1246781 - 1247899 1396 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 1143 660 Op 2 1/0.538 + CDS 1247912 - 1248202 419 ## COG4829 Muconolactone delta-isomerase 1144 660 Op 3 . + CDS 1248272 - 1249198 1310 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit 1145 661 Op 1 6/0.092 + CDS 1249308 - 1250690 1589 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 1146 661 Op 2 2/0.421 + CDS 1250690 - 1251175 596 ## COG5517 Small subunit of phenylpropionate dioxygenase 1147 661 Op 3 2/0.421 + CDS 1251185 - 1252201 1114 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 1148 661 Op 4 . + CDS 1252211 - 1252984 885 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1149 662 Tu 1 . - CDS 1252981 - 1253859 1050 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 1253810 - 1253869 3.0 1150 663 Op 1 5/0.153 + CDS 1254085 - 1254672 687 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 1151 663 Op 2 16/0.000 + CDS 1254721 - 1257132 3144 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 1152 663 Op 3 12/0.016 + CDS 1257144 - 1258028 993 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 1153 663 Op 4 . + CDS 1258021 - 1258677 859 ## COG2864 Cytochrome b subunit of formate dehydrogenase + Term 1258889 - 1258927 -0.3 - Term 1258683 - 1258719 6.2 1154 664 Tu 1 . - CDS 1258730 - 1259053 58 ## KPK_2492 hypothetical protein - Prom 1259266 - 1259325 3.3 - Term 1259369 - 1259411 3.0 1155 665 Op 1 . - CDS 1259417 - 1260235 950 ## COG2326 Uncharacterized conserved protein 1156 665 Op 2 . - CDS 1260322 - 1260759 559 ## COG0346 Lactoylglutathione lyase and related lyases + Prom 1260761 - 1260820 2.4 1157 666 Tu 1 . + CDS 1261037 - 1262191 1375 ## COG2814 Arabinose efflux permease + Term 1262342 - 1262385 2.1 1158 667 Op 1 . - CDS 1262198 - 1263289 1713 ## COG2128 Uncharacterized conserved protein 1159 667 Op 2 . - CDS 1263299 - 1264285 1142 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 1160 667 Op 3 13/0.016 - CDS 1264285 - 1265901 1836 ## COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase 1161 667 Op 4 49/0.000 - CDS 1265898 - 1266746 1018 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1162 667 Op 5 38/0.000 - CDS 1266743 - 1267687 1316 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1163 667 Op 6 . - CDS 1267698 - 1269320 2350 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 1269345 - 1269404 1.6 1164 668 Tu 1 . - CDS 1269478 - 1270488 1360 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 1270510 - 1270569 3.9 + Prom 1270466 - 1270525 4.0 1165 669 Tu 1 . + CDS 1270742 - 1271341 844 ## COG0221 Inorganic pyrophosphatase + Term 1271450 - 1271489 3.2 + Prom 1271414 - 1271473 4.5 1166 670 Tu 1 . + CDS 1271497 - 1272543 1005 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 1272431 - 1272470 1.9 1167 671 Tu 1 . - CDS 1272487 - 1274202 2064 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 1274226 - 1274259 -0.2 1168 672 Tu 1 . - CDS 1274316 - 1274399 58 ## - Term 1274468 - 1274500 5.4 1169 673 Op 1 . - CDS 1274561 - 1275247 635 ## KPN_01849 hypothetical protein 1170 673 Op 2 . - CDS 1275244 - 1275939 607 ## KPN_01848 putative glycosyltransferase - Prom 1275967 - 1276026 3.9 - Term 1276080 - 1276113 5.2 1171 674 Tu 1 . - CDS 1276123 - 1277820 2542 ## COG0281 Malic enzyme - Prom 1277890 - 1277949 3.1 - Term 1277937 - 1277974 6.2 1172 675 Op 1 . - CDS 1278001 - 1278141 188 ## Kvar_2457 30S ribosomal subunit S22 - Term 1278200 - 1278236 3.0 1173 675 Op 2 . - CDS 1278319 - 1279170 893 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 1279196 - 1279255 2.6 + Prom 1279179 - 1279238 4.2 1174 676 Tu 1 . + CDS 1279286 - 1280179 1048 ## COG0583 Transcriptional regulator 1175 677 Tu 1 . - CDS 1280247 - 1280492 462 ## Kvar_2460 hypothetical protein - Prom 1280524 - 1280583 2.2 - Term 1280561 - 1280600 8.2 1176 678 Tu 1 . - CDS 1280658 - 1281572 1111 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 1281782 - 1281841 2.5 + Prom 1282027 - 1282086 10.1 1177 679 Tu 1 . + CDS 1282228 - 1282413 82 ## COG3729 General stress protein + Term 1282452 - 1282499 9.4 + Prom 1282456 - 1282515 1.6 1178 680 Op 1 . + CDS 1282617 - 1282832 137 ## Kvar_2463 hypothetical protein 1179 680 Op 2 . + CDS 1282856 - 1283362 378 ## COG3685 Uncharacterized protein conserved in bacteria 1180 681 Tu 1 . + CDS 1283617 - 1285242 1357 ## COG0366 Glycosidases 1181 682 Tu 1 . - CDS 1285239 - 1286234 972 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 1286255 - 1286314 6.0 + Prom 1286357 - 1286416 3.6 1182 683 Tu 1 . + CDS 1286447 - 1286539 121 ## + Term 1286740 - 1286779 1.4 - Term 1286471 - 1286538 -0.7 1183 684 Op 1 . - CDS 1286548 - 1286994 411 ## COG2323 Predicted membrane protein 1184 684 Op 2 . - CDS 1287003 - 1287506 372 ## Kvar_2470 hypothetical protein - Prom 1287566 - 1287625 4.6 + Prom 1287514 - 1287573 2.8 1185 685 Op 1 . + CDS 1287652 - 1288056 376 ## COG3111 Uncharacterized conserved protein 1186 685 Op 2 . + CDS 1288072 - 1288218 93 ## + Prom 1288248 - 1288307 1.9 1187 686 Tu 1 . + CDS 1288332 - 1288763 788 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 1288770 - 1288804 5.0 + Prom 1288782 - 1288841 1.9 1188 687 Tu 1 . + CDS 1288867 - 1289736 1216 ## COG3662 Uncharacterized protein conserved in bacteria 1189 688 Tu 1 . - CDS 1289740 - 1290426 594 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 1290637 - 1290696 7.7 + Prom 1290536 - 1290595 3.9 1190 689 Tu 1 . + CDS 1290647 - 1291600 1239 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 1291616 - 1291655 2.3 + Prom 1291702 - 1291761 4.0 1191 690 Tu 1 . + CDS 1291832 - 1292749 1423 ## COG3781 Predicted membrane protein + Prom 1292858 - 1292917 5.6 1192 691 Tu 1 . + CDS 1293071 - 1295371 2745 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Prom 1295410 - 1295469 1.8 1193 692 Tu 1 . + CDS 1295520 - 1296401 1088 ## COG0583 Transcriptional regulator 1194 693 Tu 1 . - CDS 1296422 - 1297828 1830 ## COG0477 Permeases of the major facilitator superfamily + Prom 1297850 - 1297909 2.6 1195 694 Tu 1 . + CDS 1298091 - 1299152 955 ## COG1485 Predicted ATPase - Term 1299147 - 1299180 7.5 1196 695 Tu 1 . - CDS 1299187 - 1301364 2748 ## COG0376 Catalase (peroxidase I) - Prom 1301427 - 1301486 3.6 1197 696 Tu 1 . + CDS 1301803 - 1302435 552 ## COG1280 Putative threonine efflux protein + Prom 1302438 - 1302497 1.5 1198 697 Tu 1 . + CDS 1302657 - 1304567 2720 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 1199 698 Tu 1 . + CDS 1304679 - 1305416 882 ## COG0518 GMP synthase - Glutamine amidotransferase domain 1200 699 Op 1 . - CDS 1305413 - 1307698 1953 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like 1201 699 Op 2 . - CDS 1307698 - 1308840 1290 ## COG0535 Predicted Fe-S oxidoreductases 1202 699 Op 3 . - CDS 1308827 - 1309105 359 ## Kvar_2488 coenzyme PQQ synthesis D 1203 699 Op 4 2/0.421 - CDS 1309108 - 1309863 956 ## COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 1204 699 Op 5 . - CDS 1309857 - 1310783 1283 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 1205 699 Op 6 . - CDS 1310838 - 1310909 118 ## - Prom 1310968 - 1311027 1.8 - Term 1310919 - 1310973 0.7 1206 700 Tu 1 . - CDS 1311046 - 1312065 1056 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - Prom 1312281 - 1312340 2.6 + Prom 1312046 - 1312105 2.1 1207 701 Op 1 3/0.346 + CDS 1312309 - 1313301 1094 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 1313306 - 1313359 5.1 1208 701 Op 2 40/0.000 + CDS 1313388 - 1314128 955 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1209 701 Op 3 . + CDS 1314161 - 1315468 1524 ## COG0642 Signal transduction histidine kinase 1210 702 Tu 1 . + CDS 1315571 - 1316761 1502 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Term 1317794 - 1317834 0.2 1211 703 Tu 1 . - CDS 1317941 - 1318822 1096 ## COG0583 Transcriptional regulator - Prom 1318968 - 1319027 3.6 - Term 1318953 - 1318985 2.5 1212 704 Op 1 4/0.265 - CDS 1319039 - 1320511 2146 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins 1213 704 Op 2 . - CDS 1320530 - 1321912 1623 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 1322087 - 1322146 8.6 - Term 1322174 - 1322211 8.7 1214 705 Op 1 21/0.000 - CDS 1322222 - 1323157 1372 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 1215 705 Op 2 24/0.000 - CDS 1323182 - 1323922 1008 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1216 705 Op 3 1/0.538 - CDS 1323919 - 1324647 215 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1217 705 Op 4 . - CDS 1324644 - 1325339 890 ## COG0819 Putative transcription activator + Prom 1325608 - 1325667 3.7 1218 706 Op 1 . + CDS 1325802 - 1326065 135 ## Entcl_3233 surface antigen (D15) 1219 706 Op 2 . + CDS 1326084 - 1327022 1207 ## KPK_2561 putative lipoprotein + Term 1327035 - 1327073 3.0 1220 707 Tu 1 . + CDS 1327088 - 1328194 1407 ## KPK_2562 hypothetical protein - Term 1328190 - 1328225 8.1 1221 708 Op 1 16/0.000 - CDS 1328232 - 1329404 1412 ## COG0673 Predicted dehydrogenases and related proteins 1222 708 Op 2 3/0.346 - CDS 1329418 - 1330341 997 ## COG1082 Sugar phosphate isomerases/epimerases - Prom 1330368 - 1330427 2.7 1223 709 Tu 1 . - CDS 1330533 - 1331573 1173 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1331767 - 1331826 3.7 + Prom 1331874 - 1331933 2.0 1224 710 Tu 1 . + CDS 1331971 - 1333227 868 ## COG2202 FOG: PAS/PAC domain + Term 1333292 - 1333327 -0.5 1225 711 Tu 1 . + CDS 1333352 - 1334293 1157 ## KPK_2567 hypothetical protein 1226 712 Tu 1 . - CDS 1334415 - 1335722 1502 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 1227 713 Tu 1 . - CDS 1335826 - 1337322 2183 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases - Prom 1337412 - 1337471 6.7 + Prom 1337382 - 1337441 4.1 1228 714 Op 1 . + CDS 1337467 - 1338183 782 ## COG1802 Transcriptional regulators 1229 714 Op 2 . + CDS 1338183 - 1338926 861 ## COG4126 Hydantoin racemase 1230 714 Op 3 . + CDS 1338939 - 1339871 1094 ## COG0726 Predicted xylanase/chitin deacetylase - Term 1339794 - 1339857 7.3 1231 715 Tu 1 . - CDS 1339959 - 1340750 423 ## COG0730 Predicted permeases - Prom 1340777 - 1340836 2.4 + Prom 1340694 - 1340753 2.4 1232 716 Tu 1 . + CDS 1340861 - 1341628 418 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 1342328 - 1342387 5.6 1233 717 Tu 1 . + CDS 1342412 - 1343260 462 ## COG5006 Predicted permease, DMT superfamily 1234 718 Tu 1 . - CDS 1343264 - 1343764 364 ## COG1522 Transcriptional regulators - Prom 1343787 - 1343846 3.3 1235 719 Tu 1 . - CDS 1344316 - 1345041 595 ## COG0518 GMP synthase - Glutamine amidotransferase domain - Prom 1345163 - 1345222 2.9 + Prom 1345336 - 1345395 2.8 1236 720 Tu 1 . + CDS 1345479 - 1345934 -81 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 1345999 - 1346031 -0.3 1237 721 Tu 1 . - CDS 1346396 - 1347034 -127 ## KPK_2579 hypothetical protein 1238 722 Tu 1 . - CDS 1347497 - 1347907 292 ## COG4405 Uncharacterized protein conserved in bacteria - Prom 1347944 - 1348003 2.2 1239 723 Tu 1 . - CDS 1348106 - 1349041 510 ## COG0583 Transcriptional regulator - Prom 1349065 - 1349124 3.6 + Prom 1349002 - 1349061 2.1 1240 724 Op 1 . + CDS 1349141 - 1349575 333 ## Ent638_1093 hypothetical protein 1241 724 Op 2 . + CDS 1349585 - 1350076 516 ## COG3238 Uncharacterized protein conserved in bacteria + Term 1350284 - 1350316 0.6 + Prom 1350895 - 1350954 5.7 1242 725 Tu 1 . + CDS 1351013 - 1351546 119 ## KP1_3147 putative phage-related regulatory protein CII + Prom 1351757 - 1351816 3.6 1243 726 Op 1 . + CDS 1351859 - 1352446 -215 ## KP1_3146 hypothetical protein 1244 726 Op 2 11/0.023 + CDS 1352506 - 1352712 220 ## COG2801 Transposase and inactivated derivatives + Term 1352732 - 1352768 2.1 1245 727 Tu 1 . + CDS 1352853 - 1353557 328 ## COG2801 Transposase and inactivated derivatives - Term 1353845 - 1353893 1.6 1246 728 Tu 1 . - CDS 1354023 - 1354502 60 ## KP1_3141 hypothetical protein - Prom 1354670 - 1354729 2.5 1247 729 Tu 1 . - CDS 1355295 - 1356089 711 ## COG0583 Transcriptional regulator - Prom 1356206 - 1356265 4.6 + Prom 1356170 - 1356229 3.3 1248 730 Tu 1 . + CDS 1356300 - 1356914 420 ## COG0625 Glutathione S-transferase - Term 1356923 - 1356955 0.5 1249 731 Tu 1 . - CDS 1356963 - 1357277 362 ## KPK_2591 hypothetical protein - Prom 1357356 - 1357415 2.3 1250 732 Tu 1 . + CDS 1357366 - 1357485 109 ## KPK_2592 hypothetical protein + Term 1357499 - 1357553 5.3 1251 733 Op 1 3/0.346 - CDS 1357543 - 1358817 1461 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 1252 733 Op 2 19/0.000 - CDS 1358837 - 1360399 2033 ## COG0477 Permeases of the major facilitator superfamily 1253 733 Op 3 1/0.538 - CDS 1360396 - 1361439 1228 ## COG1566 Multidrug resistance efflux pump 1254 733 Op 4 . - CDS 1361423 - 1361980 573 ## COG1733 Predicted transcriptional regulators - Prom 1362185 - 1362244 2.1 + Prom 1362150 - 1362209 3.2 1255 734 Tu 1 . + CDS 1362305 - 1363423 977 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 1363525 - 1363584 1.1 - Term 1363390 - 1363420 -0.3 1256 735 Op 1 . - CDS 1363461 - 1363883 107 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1257 735 Op 2 . - CDS 1363969 - 1364355 614 ## Kvar_2541 hypothetical protein 1258 735 Op 3 . - CDS 1364352 - 1365749 1679 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 1259 735 Op 4 . - CDS 1365746 - 1365931 353 ## KPN_01769 hypothetical protein 1260 735 Op 5 . - CDS 1365942 - 1366949 1324 ## COG0405 Gamma-glutamyltransferase 1261 735 Op 6 . - CDS 1366811 - 1367527 357 ## COG0405 Gamma-glutamyltransferase - Prom 1367614 - 1367673 3.7 + Prom 1367617 - 1367676 1.5 1262 736 Tu 1 . + CDS 1367707 - 1368546 1152 ## COG1737 Transcriptional regulators + Term 1368551 - 1368582 -1.0 + Prom 1368611 - 1368670 3.8 1263 737 Op 1 31/0.000 + CDS 1368761 - 1369546 1138 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1264 737 Op 2 17/0.000 + CDS 1369556 - 1370221 898 ## COG0765 ABC-type amino acid transport system, permease component 1265 737 Op 3 34/0.000 + CDS 1370221 - 1370877 1053 ## COG0765 ABC-type amino acid transport system, permease component 1266 737 Op 4 . + CDS 1370858 - 1371595 226 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1267 737 Op 5 3/0.346 + CDS 1371611 - 1372852 1733 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 1268 737 Op 6 . + CDS 1372849 - 1374108 1409 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1269 738 Tu 1 . - CDS 1374141 - 1375118 1470 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 1375302 - 1375361 4.8 + Prom 1375186 - 1375245 4.0 1270 739 Op 1 . + CDS 1375287 - 1376198 937 ## COG0583 Transcriptional regulator + Prom 1376208 - 1376267 3.5 1271 739 Op 2 . + CDS 1376292 - 1376774 608 ## Kvar_2554 lipoprotein + Term 1376966 - 1376997 3.4 - Term 1376737 - 1376778 0.3 1272 740 Tu 1 . - CDS 1377007 - 1378107 1454 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 1273 741 Tu 1 . - CDS 1378215 - 1379822 1734 ## COG4529 Uncharacterized protein conserved in bacteria - Prom 1379978 - 1380037 4.3 + Prom 1379935 - 1379994 4.2 1274 742 Tu 1 . + CDS 1380099 - 1381331 1527 ## COG0477 Permeases of the major facilitator superfamily + Term 1381545 - 1381582 -0.2 1275 743 Tu 1 . - CDS 1381372 - 1382286 1204 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 1382385 - 1382444 8.0 + Prom 1382349 - 1382408 8.6 1276 744 Tu 1 . + CDS 1382490 - 1383590 1228 ## Kvar_2559 hypothetical protein 1277 745 Tu 1 . - CDS 1383566 - 1384144 544 ## COG1309 Transcriptional regulator + Prom 1384621 - 1384680 6.6 1278 746 Tu 1 . + CDS 1384785 - 1385318 346 ## PROTEIN SUPPORTED gi|227987788|ref|ZP_04034884.1| acetyltransferase, ribosomal protein N-acetylase + Term 1385320 - 1385350 1.9 - Term 1385301 - 1385341 1.3 1279 747 Tu 1 . - CDS 1385356 - 1386612 1500 ## COG0477 Permeases of the major facilitator superfamily - Prom 1386772 - 1386831 2.6 + Prom 1387066 - 1387125 1.8 1280 748 Op 1 21/0.000 + CDS 1387256 - 1388314 1465 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 1281 748 Op 2 24/0.000 + CDS 1388339 - 1389154 1106 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1282 748 Op 3 . + CDS 1389151 - 1389927 203 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 1283 748 Op 4 1/0.538 + CDS 1389932 - 1390660 1114 ## COG3665 Uncharacterized conserved protein 1284 748 Op 5 1/0.538 + CDS 1390671 - 1391306 920 ## COG3665 Uncharacterized conserved protein + Term 1391310 - 1391347 4.0 1285 749 Op 1 1/0.538 + CDS 1391473 - 1395078 4063 ## COG0439 Biotin carboxylase 1286 749 Op 2 . + CDS 1395078 - 1396871 1786 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Term 1396868 - 1396903 6.1 1287 750 Tu 1 . - CDS 1396914 - 1397552 744 ## Kvar_2574 hypothetical protein - Prom 1397572 - 1397631 2.4 + Prom 1398001 - 1398060 2.2 1288 751 Tu 1 . + CDS 1398087 - 1398878 230 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 1398908 - 1398947 2.0 + Prom 1398986 - 1399045 2.9 1289 752 Tu 1 . + CDS 1399079 - 1399633 459 ## COG1280 Putative threonine efflux protein + Term 1399707 - 1399732 -0.5 1290 753 Tu 1 . - CDS 1399758 - 1399919 81 ## Kvar_2586 LuxR family transcriptional regulator - Term 1400457 - 1400505 -0.5 1291 754 Tu 1 . - CDS 1400506 - 1400883 159 ## COG3539 P pilus assembly protein, pilin FimA - Prom 1400914 - 1400973 2.8 - Term 1400894 - 1400920 -1.0 1292 755 Tu 1 . - CDS 1401029 - 1401517 151 ## KPK_2633 putative fimbrial protein - Prom 1401579 - 1401638 4.8 1293 756 Tu 1 . - CDS 1402071 - 1404185 1004 ## COG3188 P pilus assembly protein, porin PapC 1294 757 Op 1 7/0.057 - CDS 1404634 - 1405311 279 ## COG3121 P pilus assembly protein, chaperone PapD - Term 1405317 - 1405347 3.4 1295 757 Op 2 . - CDS 1405369 - 1405899 534 ## COG3539 P pilus assembly protein, pilin FimA - Prom 1406098 - 1406157 5.3 1296 758 Op 1 . + CDS 1406479 - 1407000 113 ## KPK_2637 cyclic nucleotide-binding domain protein 1297 758 Op 2 . + CDS 1407067 - 1407696 302 ## Kvar_2593 Crp/Fnr family transcriptional regulator + Term 1407746 - 1407776 0.2 1298 759 Tu 1 . - CDS 1407767 - 1408435 239 ## KPK_2639 transporter, major facilitator family + Prom 1408853 - 1408912 4.2 1299 760 Tu 1 . + CDS 1409079 - 1409981 335 ## COG0583 Transcriptional regulator + Term 1410000 - 1410026 -0.7 1300 761 Tu 1 . - CDS 1410023 - 1410874 324 ## COG0583 Transcriptional regulator - Prom 1410928 - 1410987 2.6 + Prom 1410890 - 1410949 4.4 1301 762 Tu 1 . + CDS 1411074 - 1411865 136 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 1411931 - 1411966 5.6 - Term 1411826 - 1411855 -0.3 1302 763 Tu 1 . - CDS 1411970 - 1412398 193 ## Kvar_2598 Tol-Pal system TolA 1303 764 Op 1 . - CDS 1412510 - 1413652 1027 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1304 764 Op 2 2/0.421 - CDS 1413652 - 1414407 1188 ## COG5426 Uncharacterized membrane protein 1305 764 Op 3 2/0.421 - CDS 1414422 - 1415501 1303 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 1306 764 Op 4 21/0.000 - CDS 1415505 - 1416506 1417 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1307 764 Op 5 2/0.421 - CDS 1416525 - 1417307 178 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Term 1417611 - 1417637 -0.3 1308 765 Tu 1 . - CDS 1417652 - 1418662 1209 ## COG1609 Transcriptional regulators - Prom 1418759 - 1418818 3.9 1309 766 Tu 1 . + CDS 1419022 - 1419972 979 ## COG1879 ABC-type sugar transport system, periplasmic component - Term 1419881 - 1419925 3.8 1310 767 Tu 1 . - CDS 1419974 - 1420846 587 ## COG0524 Sugar kinases, ribokinase family - Prom 1421029 - 1421088 5.8 1311 768 Op 1 . + CDS 1420873 - 1421718 657 ## COG0434 Predicted TIM-barrel enzyme 1312 768 Op 2 . + CDS 1421718 - 1422362 611 ## COG0819 Putative transcription activator + Term 1422375 - 1422424 2.1 + Prom 1422643 - 1422702 4.3 1313 769 Op 1 38/0.000 + CDS 1422773 - 1424350 1471 ## COG0747 ABC-type dipeptide transport system, periplasmic component 1314 769 Op 2 49/0.000 + CDS 1424331 - 1425290 920 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1315 769 Op 3 13/0.016 + CDS 1425283 - 1426146 759 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1316 769 Op 4 . + CDS 1426143 - 1427807 488 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 1427977 - 1428010 -0.1 1317 770 Op 1 19/0.000 - CDS 1428002 - 1429540 1605 ## COG0477 Permeases of the major facilitator superfamily 1318 770 Op 2 7/0.057 - CDS 1429551 - 1430729 975 ## COG1566 Multidrug resistance efflux pump 1319 770 Op 3 . - CDS 1430745 - 1431227 534 ## COG1846 Transcriptional regulators - Prom 1431254 - 1431313 2.1 - Term 1432126 - 1432164 -0.4 1320 771 Tu 1 . - CDS 1432322 - 1432837 -140 ## Dole_1262 hypothetical protein 1321 772 Tu 1 . - CDS 1433901 - 1434113 111 ## gi|290509518|ref|ZP_06548889.1| N-6 DNA methylase - Prom 1434293 - 1434352 2.2 + Prom 1436566 - 1436625 3.6 1322 773 Tu 1 . + CDS 1436808 - 1437023 119 ## + Prom 1437577 - 1437636 3.4 1323 774 Tu 1 . + CDS 1437678 - 1437752 60 ## + Term 1437948 - 1437985 -0.9 1324 775 Tu 1 . - CDS 1437952 - 1438188 148 ## Dole_1258 type III restriction protein res subunit - Prom 1438288 - 1438347 2.6 1325 776 Tu 1 . - CDS 1441075 - 1441860 560 ## COG3713 Outer membrane protein V + Prom 1441778 - 1441837 5.2 1326 777 Op 1 40/0.000 + CDS 1441985 - 1442680 456 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1327 777 Op 2 1/0.538 + CDS 1442677 - 1443873 673 ## COG0642 Signal transduction histidine kinase + Term 1443881 - 1443909 -0.9 1328 777 Op 3 27/0.000 + CDS 1443952 - 1445100 591 ## COG0845 Membrane-fusion protein 1329 777 Op 4 . + CDS 1445097 - 1448222 1537 ## COG0841 Cation/multidrug efflux pump + Term 1448378 - 1448426 0.2 1330 778 Tu 1 . - CDS 1448158 - 1449102 704 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1449168 - 1449227 1.5 + Prom 1449220 - 1449279 1.5 1331 779 Op 1 . + CDS 1449520 - 1450413 933 ## Kvar_2625 QbdB protein 1332 779 Op 2 . + CDS 1450474 - 1450956 467 ## Kvar_2626 globin 1333 780 Op 1 . + CDS 1451093 - 1452607 1382 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 1334 780 Op 2 . + CDS 1452632 - 1453240 778 ## Kvar_2628 nitrile hydratase, subunit alpha (EC:4.2.1.84) 1335 780 Op 3 . + CDS 1453256 - 1453909 781 ## Kvar_2629 nitrile hydratase (EC:4.2.1.84) 1336 780 Op 4 . + CDS 1453906 - 1454373 288 ## Kvar_2630 hypothetical protein 1337 780 Op 5 . + CDS 1454370 - 1454579 307 ## Kvar_2631 hypothetical protein 1338 780 Op 6 . + CDS 1454590 - 1455345 501 ## Kvar_2632 hypothetical protein 1339 780 Op 7 . + CDS 1455352 - 1455939 -30 ## COG0406 Fructose-2,6-bisphosphatase + Prom 1456034 - 1456093 1.6 1340 781 Tu 1 . + CDS 1456120 - 1457589 1056 ## COG2267 Lysophospholipase + Term 1457605 - 1457635 1.0 1341 782 Tu 1 . - CDS 1457642 - 1458517 1055 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - Prom 1458553 - 1458612 2.9 - Term 1458595 - 1458623 -0.0 1342 783 Tu 1 . - CDS 1458630 - 1459265 505 ## COG0583 Transcriptional regulator 1343 784 Tu 1 . + CDS 1459627 - 1460370 803 ## COG0730 Predicted permeases 1344 785 Tu 1 . - CDS 1460376 - 1461197 922 ## COG2188 Transcriptional regulators + Prom 1461102 - 1461161 5.6 1345 786 Op 1 2/0.421 + CDS 1461330 - 1462868 2117 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1346 786 Op 2 . + CDS 1462880 - 1464208 1848 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 1464230 - 1464265 2.7 1347 787 Tu 1 . - CDS 1464187 - 1464288 69 ## - Prom 1464390 - 1464449 6.0 + Prom 1464859 - 1464918 2.1 1348 788 Op 1 . + CDS 1464940 - 1466385 1766 ## COG0477 Permeases of the major facilitator superfamily 1349 788 Op 2 . + CDS 1466375 - 1466818 453 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain + Term 1466830 - 1466861 4.8 + Prom 1466965 - 1467024 5.9 1350 789 Op 1 . + CDS 1467194 - 1467490 158 ## KP1_2728 hypothetical protein 1351 789 Op 2 . + CDS 1467515 - 1467655 211 ## + Term 1467667 - 1467698 4.8 1352 790 Tu 1 . + CDS 1467845 - 1468771 818 ## COG2819 Predicted hydrolase of the alpha/beta superfamily 1353 791 Tu 1 . - CDS 1468805 - 1470460 1852 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 1470700 - 1470759 7.3 + Prom 1470659 - 1470718 8.2 1354 792 Tu 1 . + CDS 1470757 - 1471005 293 ## Kvar_2647 hypothetical protein + Term 1471016 - 1471046 -1.0 + Prom 1471232 - 1471291 2.8 1355 793 Op 1 . + CDS 1471315 - 1471533 317 ## KP1_2722 hypothetical protein 1356 793 Op 2 . + CDS 1471514 - 1472296 910 ## COG0024 Methionine aminopeptidase + Term 1472328 - 1472368 4.3 + Prom 1472434 - 1472493 5.3 1357 794 Op 1 . + CDS 1472557 - 1473672 1106 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 1358 794 Op 2 . + CDS 1473659 - 1474003 392 ## Kvar_2651 hypothetical protein 1359 794 Op 3 . + CDS 1474032 - 1474565 509 ## Kvar_2652 hypothetical protein 1360 794 Op 4 . + CDS 1474568 - 1474774 184 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 + Term 1474782 - 1474817 3.4 1361 795 Tu 1 . - CDS 1474934 - 1475221 239 ## Kvar_2654 hypothetical protein + Prom 1475569 - 1475628 5.7 1362 796 Op 1 . + CDS 1475667 - 1476230 717 ## Kvar_2655 fimbrial protein + Term 1476255 - 1476288 2.1 1363 796 Op 2 10/0.030 + CDS 1476323 - 1477003 496 ## COG3121 P pilus assembly protein, chaperone PapD 1364 796 Op 3 6/0.092 + CDS 1477019 - 1479526 2327 ## COG3188 P pilus assembly protein, porin PapC 1365 796 Op 4 . + CDS 1479514 - 1480518 671 ## COG3539 P pilus assembly protein, pilin FimA 1366 797 Tu 1 . + CDS 1480651 - 1481943 1408 ## COG1649 Uncharacterized protein conserved in bacteria + Term 1481979 - 1482018 -0.0 1367 798 Op 1 8/0.039 - CDS 1481960 - 1483282 1520 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes 1368 798 Op 2 . - CDS 1483282 - 1483548 373 ## COG1396 Predicted transcriptional regulators - Prom 1483590 - 1483649 3.5 - Term 1483614 - 1483644 1.6 1369 799 Op 1 1/0.538 - CDS 1483814 - 1484140 427 ## COG2351 Transthyretin-like protein 1370 799 Op 2 1/0.538 - CDS 1484137 - 1484637 706 ## COG3195 Uncharacterized protein conserved in bacteria 1371 799 Op 3 . - CDS 1484615 - 1486024 1743 ## COG2233 Xanthine/uracil permeases - Prom 1486166 - 1486225 4.3 + Prom 1486124 - 1486183 3.6 1372 800 Tu 1 . + CDS 1486340 - 1487494 1609 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1373 801 Tu 1 . - CDS 1487475 - 1488398 1226 ## COG0583 Transcriptional regulator - Prom 1488455 - 1488514 2.2 + Prom 1488318 - 1488377 2.4 1374 802 Op 1 11/0.023 + CDS 1488524 - 1489561 1353 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 1375 802 Op 2 . + CDS 1489573 - 1490547 909 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 1490456 - 1490516 14.3 1376 803 Tu 1 . - CDS 1490524 - 1491762 1616 ## COG2814 Arabinose efflux permease + Prom 1491783 - 1491842 2.6 1377 804 Tu 1 . + CDS 1491868 - 1492812 1151 ## COG2207 AraC-type DNA-binding domain-containing proteins 1378 805 Tu 1 . - CDS 1492822 - 1493577 938 ## KPK_2717 hypothetical protein - Prom 1493653 - 1493712 4.4 - Term 1493713 - 1493748 4.7 1379 806 Op 1 . - CDS 1493755 - 1494066 542 ## COG0662 Mannose-6-phosphate isomerase 1380 806 Op 2 . - CDS 1494088 - 1494351 321 ## COG4628 Uncharacterized conserved protein 1381 807 Op 1 2/0.421 + CDS 1494635 - 1495663 1377 ## COG3491 Isopenicillin N synthase and related dioxygenases 1382 807 Op 2 10/0.030 + CDS 1495687 - 1496493 1290 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 1383 807 Op 3 32/0.000 + CDS 1496490 - 1497281 385 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1384 807 Op 4 . + CDS 1497266 - 1497937 1088 ## COG2011 ABC-type metal ion transport system, permease component 1385 808 Tu 1 . - CDS 1497948 - 1499006 988 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 1499049 - 1499108 4.4 + Prom 1499013 - 1499072 3.9 1386 809 Tu 1 . + CDS 1499096 - 1499941 1056 ## COG0583 Transcriptional regulator 1387 810 Tu 1 . - CDS 1499938 - 1501038 1238 ## COG0477 Permeases of the major facilitator superfamily - Prom 1501128 - 1501187 4.4 + Prom 1501092 - 1501151 9.6 1388 811 Tu 1 . + CDS 1501304 - 1501729 376 ## KPK_2728 hypothetical protein 1389 812 Tu 1 . - CDS 1501768 - 1502214 430 ## Kvar_2682 glyoxalase/bleomycin resistance protein/dioxygenase - Prom 1502240 - 1502299 2.6 + Prom 1502361 - 1502420 2.9 1390 813 Tu 1 . + CDS 1502444 - 1503631 1581 ## COG0477 Permeases of the major facilitator superfamily + Prom 1503655 - 1503714 2.0 1391 814 Tu 1 . + CDS 1503848 - 1504138 318 ## KP1_2691 hypothetical protein + Prom 1504220 - 1504279 2.2 1392 815 Tu 1 . + CDS 1504341 - 1505102 772 ## COG4106 Trans-aconitate methyltransferase + Term 1505142 - 1505173 1.8 1393 816 Op 1 . + CDS 1505259 - 1505579 351 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 1394 816 Op 2 . + CDS 1505570 - 1505950 237 ## Kvar_2687 hypothetical protein + Term 1505964 - 1505999 2.7 - Term 1505940 - 1505978 4.7 1395 817 Op 1 . - CDS 1505999 - 1506097 76 ## 1396 817 Op 2 . - CDS 1506162 - 1506608 549 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 1506783 - 1506842 2.8 - Term 1506819 - 1506846 1.5 1397 818 Tu 1 . - CDS 1506863 - 1508314 1624 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 1508357 - 1508416 1.5 1398 819 Op 1 1/0.538 - CDS 1508428 - 1508958 416 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1399 819 Op 2 . - CDS 1509036 - 1510460 1619 ## COG2199 FOG: GGDEF domain - Prom 1510514 - 1510573 8.5 1400 820 Op 1 . - CDS 1510575 - 1510943 382 ## Kvar_2697 hypothetical protein 1401 820 Op 2 3/0.346 - CDS 1510943 - 1511890 1014 ## COG2066 Glutaminase 1402 820 Op 3 . - CDS 1511950 - 1513335 1980 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 1513401 - 1513460 2.4 + Prom 1513357 - 1513416 3.8 1403 821 Tu 1 . + CDS 1513442 - 1514320 946 ## COG0583 Transcriptional regulator + Term 1514445 - 1514493 7.5 1404 822 Tu 1 . - CDS 1514274 - 1514756 717 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 1514859 - 1514918 3.1 + Prom 1514713 - 1514772 5.0 1405 823 Tu 1 . + CDS 1514902 - 1515846 1096 ## COG0039 Malate/lactate dehydrogenases - Term 1515592 - 1515624 1.0 1406 824 Op 1 1/0.538 - CDS 1515861 - 1516622 894 ## COG1349 Transcriptional regulators of sugar metabolism 1407 824 Op 2 3/0.346 - CDS 1516624 - 1517610 438 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 1408 824 Op 3 . - CDS 1517603 - 1518838 1040 ## COG3395 Uncharacterized protein conserved in bacteria - Prom 1518928 - 1518987 5.8 + Prom 1518873 - 1518932 5.3 1409 825 Op 1 . + CDS 1519014 - 1520162 1285 ## COG1454 Alcohol dehydrogenase, class IV 1410 825 Op 2 2/0.421 + CDS 1520176 - 1521060 777 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 1411 825 Op 3 . + CDS 1521137 - 1522546 1544 ## COG0591 Na+/proline symporter 1412 825 Op 4 . + CDS 1522550 - 1523716 811 ## COG4692 Predicted neuraminidase (sialidase) 1413 825 Op 5 . + CDS 1523713 - 1524186 405 ## COG2731 Beta-galactosidase, beta subunit 1414 825 Op 6 . + CDS 1524183 - 1524860 213 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1415 826 Tu 1 . - CDS 1524924 - 1525715 1023 ## COG0384 Predicted epimerase, PhzC/PhzF homolog - Prom 1525829 - 1525888 2.1 + Prom 1525825 - 1525884 6.2 1416 827 Tu 1 . + CDS 1525917 - 1527116 1487 ## COG2814 Arabinose efflux permease + Term 1527134 - 1527173 6.4 - Term 1527122 - 1527159 8.5 1417 828 Tu 1 . - CDS 1527187 - 1527855 867 ## COG2095 Multiple antibiotic transporter - Prom 1528011 - 1528070 5.8 + Prom 1528000 - 1528059 7.5 1418 829 Op 1 3/0.346 + CDS 1528117 - 1528551 442 ## COG1846 Transcriptional regulators 1419 829 Op 2 . + CDS 1528571 - 1528945 420 ## COG2207 AraC-type DNA-binding domain-containing proteins 1420 829 Op 3 . + CDS 1528986 - 1529204 250 ## KPN_01623 hypothetical protein + Term 1529229 - 1529256 -0.9 - Term 1529044 - 1529089 6.2 1421 830 Tu 1 . - CDS 1529251 - 1530150 1519 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 1530309 - 1530368 9.0 + Prom 1530123 - 1530182 2.5 1422 831 Tu 1 . + CDS 1530327 - 1531541 1638 ## COG0477 Permeases of the major facilitator superfamily 1423 832 Tu 1 . + CDS 1531671 - 1532153 714 ## KP1_2654 hypothetical protein + Term 1532355 - 1532385 -1.0 - Term 1532142 - 1532188 13.8 1424 833 Op 1 9/0.037 - CDS 1532189 - 1532887 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1425 833 Op 2 9/0.037 - CDS 1532897 - 1533694 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1426 833 Op 3 24/0.000 - CDS 1533694 - 1534767 1546 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 1427 833 Op 4 20/0.000 - CDS 1534767 - 1536341 1988 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 1428 833 Op 5 . - CDS 1536403 - 1537674 2001 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 1537696 - 1537755 1.7 1429 834 Tu 1 . - CDS 1537845 - 1538948 1337 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 1539030 - 1539089 1.6 1430 835 Tu 1 . - CDS 1539097 - 1539495 504 ## COG0607 Rhodanese-related sulfurtransferase 1431 836 Op 1 . + CDS 1539599 - 1540660 755 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 1432 836 Op 2 . + CDS 1540629 - 1540844 429 ## KPK_2772 hypothetical protein + Term 1540852 - 1540891 6.7 - Term 1540653 - 1540680 1.2 1433 837 Tu 1 . - CDS 1540897 - 1541337 632 ## Kvar_2730 GCN5-related N-acetyltransferase - Prom 1541461 - 1541520 2.5 - Term 1541451 - 1541480 0.4 1434 838 Tu 1 . - CDS 1541603 - 1542667 1386 ## COG1609 Transcriptional regulators - Prom 1542764 - 1542823 2.9 + Prom 1542653 - 1542712 3.1 1435 839 Op 1 3/0.346 + CDS 1542864 - 1545971 3634 ## COG3250 Beta-galactosidase/beta-glucuronidase 1436 839 Op 2 . + CDS 1546026 - 1547291 1735 ## COG0477 Permeases of the major facilitator superfamily + Term 1547470 - 1547517 -0.8 - Term 1547242 - 1547281 -0.9 1437 840 Op 1 . - CDS 1547320 - 1548408 1154 ## COG4637 Predicted ATPase - Term 1548422 - 1548459 0.1 1438 840 Op 2 . - CDS 1548495 - 1548734 254 ## KPK_2779 hypothetical protein - Prom 1548934 - 1548993 5.8 + Prom 1548940 - 1548999 4.1 1439 841 Tu 1 . + CDS 1549050 - 1549910 1045 ## COG2367 Beta-lactamase class A - Term 1549855 - 1549881 -0.3 1440 842 Tu 1 . - CDS 1549928 - 1550689 686 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 1550880 - 1550939 6.3 + Prom 1550857 - 1550916 5.9 1441 843 Op 1 5/0.153 + CDS 1550950 - 1551852 1021 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 1442 843 Op 2 6/0.092 + CDS 1551864 - 1553129 1774 ## COG3395 Uncharacterized protein conserved in bacteria 1443 843 Op 3 4/0.265 + CDS 1553122 - 1553742 1046 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1444 843 Op 4 1/0.538 + CDS 1553747 - 1554529 823 ## COG3622 Hydroxypyruvate isomerase 1445 843 Op 5 . + CDS 1554587 - 1555951 1604 ## COG2610 H+/gluconate symporter and related permeases + Term 1555958 - 1555996 4.3 1446 844 Tu 1 . - CDS 1556014 - 1556913 560 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1556991 - 1557050 11.4 + Prom 1556997 - 1557056 8.0 1447 845 Tu 1 . + CDS 1557223 - 1557834 105 ## Kvar_2744 LuxR family transcriptional regulator + Term 1558012 - 1558064 1.9 1448 846 Tu 1 . + CDS 1558385 - 1559602 995 ## COG2200 FOG: EAL domain - Term 1559389 - 1559413 -1.0 1449 847 Tu 1 . - CDS 1559623 - 1560135 217 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 1560156 - 1560215 2.5 - Term 1560241 - 1560271 4.1 1450 848 Tu 1 . - CDS 1560303 - 1560776 384 ## COG0071 Molecular chaperone (small heat shock protein) - Prom 1560837 - 1560896 5.1 + Prom 1561194 - 1561253 1.7 1451 849 Tu 1 . + CDS 1561273 - 1561377 112 ## + Term 1561465 - 1561514 -0.3 1452 850 Op 1 . + CDS 1561543 - 1561722 65 ## 1453 850 Op 2 . + CDS 1561806 - 1562435 144 ## Kvar_2749 LuxR family transcriptional regulator - Term 1562843 - 1562867 -1.0 1454 851 Tu 1 . - CDS 1562904 - 1563449 203 ## PROTEIN SUPPORTED gi|226867588|ref|ZP_03817223.1| acetyltransferase, ribosomal protein N-acetylase - Prom 1563572 - 1563631 2.4 + Prom 1563558 - 1563617 3.8 1455 852 Tu 1 . + CDS 1563669 - 1564562 205 ## COG0583 Transcriptional regulator 1456 853 Tu 1 . - CDS 1564573 - 1565094 2 ## COG1280 Putative threonine efflux protein - Prom 1565197 - 1565256 4.2 1457 854 Op 1 . - CDS 1565305 - 1565994 246 ## COG1814 Uncharacterized membrane protein 1458 854 Op 2 . - CDS 1566048 - 1566629 417 ## KPK_2819 hypothetical protein - Prom 1566657 - 1566716 2.6 + Prom 1566679 - 1566738 2.6 1459 855 Tu 1 . + CDS 1566776 - 1566997 114 ## KPK_2821 3-beta hydroxysteroid dehydrogenase/isomerase family protein + Term 1567085 - 1567124 -0.8 - Term 1567433 - 1567486 12.6 1460 856 Tu 1 . - CDS 1567676 - 1568569 194 ## COG0583 Transcriptional regulator - Prom 1568603 - 1568662 3.5 + Prom 1568608 - 1568667 3.4 1461 857 Tu 1 . + CDS 1568689 - 1569093 95 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 1569135 - 1569177 -0.9 + Prom 1569305 - 1569364 3.9 1462 858 Op 1 . + CDS 1569389 - 1570018 -87 ## COG0406 Fructose-2,6-bisphosphatase 1463 858 Op 2 . + CDS 1570086 - 1571006 422 ## COG0583 Transcriptional regulator 1464 859 Tu 1 . - CDS 1571003 - 1572697 715 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 1572744 - 1572803 2.0 - Term 1573156 - 1573193 3.6 1465 860 Tu 1 . - CDS 1573213 - 1575258 2027 ## COG0339 Zn-dependent oligopeptidases - Prom 1575281 - 1575340 4.1 + Prom 1575238 - 1575297 4.1 1466 861 Op 1 5/0.153 + CDS 1575389 - 1576138 1051 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity + Prom 1576145 - 1576204 3.2 1467 861 Op 2 . + CDS 1576230 - 1576916 798 ## COG1802 Transcriptional regulators 1468 862 Tu 1 . - CDS 1576968 - 1577399 563 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 1577478 - 1577537 5.1 - Term 1577617 - 1577656 8.1 1469 863 Op 1 3/0.346 - CDS 1577664 - 1579127 1813 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 1579211 - 1579270 2.0 - Term 1579334 - 1579373 -0.5 1470 863 Op 2 . - CDS 1579414 - 1580697 1572 ## COG0477 Permeases of the major facilitator superfamily - Prom 1580733 - 1580792 2.5 1471 864 Tu 1 . - CDS 1580812 - 1581138 485 ## COG1742 Uncharacterized conserved protein - Prom 1581166 - 1581225 3.7 + Prom 1581192 - 1581251 2.4 1472 865 Op 1 . + CDS 1581283 - 1581624 503 ## Kvar_2773 hypothetical protein + Term 1581641 - 1581673 3.3 1473 865 Op 2 . + CDS 1581703 - 1582263 461 ## PROTEIN SUPPORTED gi|116512426|ref|YP_809642.1| spermidine acetyltransferase + Term 1582292 - 1582328 2.1 1474 866 Tu 1 . - CDS 1582257 - 1582967 917 ## Kvar_2775 hypothetical protein - Prom 1582989 - 1583048 4.2 + Prom 1582773 - 1582832 3.7 1475 867 Tu 1 . + CDS 1583069 - 1583338 377 ## KPK_2874 hypothetical protein + Prom 1583341 - 1583400 2.6 1476 868 Op 1 16/0.000 + CDS 1583489 - 1585924 2653 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 1477 868 Op 2 9/0.037 + CDS 1585935 - 1586552 842 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 1478 868 Op 3 4/0.265 + CDS 1586554 - 1587411 973 ## COG3302 DMSO reductase anchor subunit 1479 868 Op 4 . + CDS 1587456 - 1588061 921 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Term 1588069 - 1588103 8.1 + Prom 1588110 - 1588169 3.9 1480 869 Tu 1 . + CDS 1588231 - 1589490 1629 ## COG0038 Chloride channel protein EriC + Term 1589533 - 1589577 -0.1 1481 870 Tu 1 . - CDS 1589443 - 1590138 768 ## COG0132 Dethiobiotin synthetase - Prom 1590158 - 1590217 1.9 1482 871 Tu 1 5/0.153 - CDS 1590266 - 1591486 273 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 1591524 - 1591583 1.8 1483 872 Tu 1 . - CDS 1591611 - 1592513 218 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 1592537 - 1592596 5.6 + Prom 1592514 - 1592573 6.2 1484 873 Tu 1 . + CDS 1592644 - 1593894 1447 ## COG0477 Permeases of the major facilitator superfamily 1485 874 Tu 1 . - CDS 1593925 - 1594056 98 ## KP1_2594 hypothetical protein 1486 875 Tu 1 . + CDS 1594234 - 1595721 1924 ## COG2317 Zn-dependent carboxypeptidase + Prom 1595818 - 1595877 1.9 1487 876 Tu 1 . + CDS 1595897 - 1596316 137 ## + Term 1596348 - 1596378 5.0 - Term 1596620 - 1596666 2.0 1488 877 Tu 1 . - CDS 1596668 - 1596772 140 ## - Prom 1596884 - 1596943 1.9 1489 878 Tu 1 . + CDS 1597254 - 1598066 688 ## COG3591 V8-like Glu-specific endopeptidase + Term 1598262 - 1598303 -0.9 - Term 1597860 - 1597914 1.0 1490 879 Tu 1 . - CDS 1598067 - 1600169 2038 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 1600241 - 1600300 1.8 1491 880 Op 1 12/0.016 - CDS 1600331 - 1600660 606 ## COG2076 Membrane transporters of cations and cationic drugs 1492 880 Op 2 . - CDS 1600647 - 1601009 348 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 1601193 - 1601252 7.3 + Prom 1601224 - 1601283 3.9 1493 881 Tu 1 . + CDS 1601487 - 1602485 1628 ## COG0628 Predicted permease + Prom 1602513 - 1602572 4.0 1494 882 Op 1 . + CDS 1602711 - 1604366 2181 ## KPK_2894 malonate decarboxylase, alpha subunit 1495 882 Op 2 . + CDS 1604366 - 1605208 835 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 1496 882 Op 3 . + CDS 1605226 - 1605525 335 ## Kvar_2797 malonate decarboxylase acyl carrier protein 1497 882 Op 4 . + CDS 1605518 - 1606351 1341 ## COG0777 Acetyl-CoA carboxylase beta subunit 1498 882 Op 5 . + CDS 1606351 - 1607151 1014 ## Kvar_2799 malonate decarboxylase, subunit gamma + Term 1607194 - 1607244 4.0 1499 883 Op 1 . + CDS 1607288 - 1608247 218 ## PROTEIN SUPPORTED gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 1500 883 Op 2 . + CDS 1608251 - 1608868 749 ## KPK_2900 phosphoribosyl-dephospho-CoA transferase (EC:2.7.7.61) 1501 883 Op 3 . + CDS 1608868 - 1609770 985 ## COG0331 (acyl-carrier-protein) S-malonyltransferase + Term 1609862 - 1609914 -0.8 1502 884 Tu 1 . - CDS 1609760 - 1610686 1408 ## COG0583 Transcriptional regulator - Prom 1610726 - 1610785 3.8 - Term 1610779 - 1610829 9.5 1503 885 Tu 1 . - CDS 1610845 - 1612500 1973 ## COG0579 Predicted dehydrogenase - Prom 1612554 - 1612613 9.5 - Term 1612712 - 1612754 9.3 1504 886 Tu 1 . - CDS 1612763 - 1613686 862 ## COG2103 Predicted sugar phosphate isomerase - Prom 1613760 - 1613819 1.8 1505 887 Op 1 9/0.037 + CDS 1614134 - 1615675 1932 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 1506 887 Op 2 . + CDS 1615672 - 1616391 274 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Term 1616491 - 1616524 3.7 1507 888 Tu 1 . - CDS 1616372 - 1617322 1195 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 1617404 - 1617463 2.0 - Term 1617475 - 1617529 7.0 1508 889 Tu 1 . - CDS 1617537 - 1620314 3524 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 1620740 - 1620799 8.1 1509 890 Op 1 1/0.538 + CDS 1620956 - 1622467 2219 ## COG0471 Di- and tricarboxylate transporters + Term 1622475 - 1622507 5.3 1510 890 Op 2 . + CDS 1622522 - 1624174 483 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 1624199 - 1624235 7.0 + Prom 1624224 - 1624283 6.3 1511 891 Tu 1 . + CDS 1624357 - 1625955 2019 ## COG0668 Small-conductance mechanosensitive channel 1512 892 Op 1 6/0.092 - CDS 1627267 - 1627656 555 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 1513 892 Op 2 3/0.346 - CDS 1627646 - 1628413 922 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 1514 892 Op 3 2/0.421 - CDS 1628403 - 1629737 1853 ## COG0015 Adenylosuccinate lyase 1515 892 Op 4 7/0.057 - CDS 1629765 - 1630967 1536 ## COG0183 Acetyl-CoA acetyltransferase 1516 892 Op 5 21/0.000 - CDS 1630978 - 1631634 1126 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 1517 892 Op 6 . - CDS 1631645 - 1632331 970 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 1632379 - 1632438 2.8 + Prom 1632371 - 1632430 3.0 1518 893 Tu 1 . + CDS 1632501 - 1633307 1094 ## COG1414 Transcriptional regulator + Term 1633475 - 1633510 0.2 1519 894 Tu 1 . - CDS 1633304 - 1633867 791 ## COG2840 Uncharacterized protein conserved in bacteria - Prom 1633890 - 1633949 2.9 1520 895 Tu 1 . - CDS 1633969 - 1634895 857 ## COG0583 Transcriptional regulator - Prom 1634984 - 1635043 3.9 + Prom 1634802 - 1634861 1.5 1521 896 Tu 1 3/0.346 + CDS 1635044 - 1635748 817 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Prom 1635750 - 1635809 80.3 1522 897 Op 1 3/0.346 + CDS 1636040 - 1636420 477 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1523 897 Op 2 4/0.265 + CDS 1636420 - 1637865 1393 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1524 898 Tu 1 . + CDS 1637989 - 1639515 2087 ## COG2978 Putative p-aminobenzoyl-glutamate transporter 1525 899 Tu 1 . - CDS 1639548 - 1639706 147 ## Kvar_2826 hypothetical protein + Prom 1639876 - 1639935 2.3 1526 900 Tu 1 . + CDS 1639964 - 1640479 592 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Prom 1640589 - 1640648 5.0 1527 901 Tu 1 7/0.057 + CDS 1640674 - 1641426 966 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 1641471 - 1641530 3.8 1528 902 Tu 1 . + CDS 1641565 - 1642515 1274 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 1642539 - 1642569 5.0 - Term 1642577 - 1642613 4.3 1529 903 Tu 1 . - CDS 1642633 - 1642821 345 ## Entcl_2247 hypothetical protein - Prom 1642846 - 1642905 5.5 - Term 1642904 - 1642935 4.1 1530 904 Op 1 17/0.000 - CDS 1642970 - 1644358 1938 ## COG1282 NAD/NADP transhydrogenase beta subunit 1531 904 Op 2 . - CDS 1644369 - 1645898 1782 ## COG3288 NAD/NADP transhydrogenase alpha subunit - Prom 1646022 - 1646081 5.7 + Prom 1646152 - 1646211 5.1 1532 905 Tu 1 . + CDS 1646420 - 1647370 1168 ## Kvar_2833 hypothetical protein + Term 1647386 - 1647426 5.2 + Prom 1647411 - 1647470 6.2 1533 906 Op 1 7/0.057 + CDS 1647548 - 1648930 1646 ## COG0531 Amino acid transporters 1534 906 Op 2 . + CDS 1648967 - 1649689 1042 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Term 1649571 - 1649595 -1.0 1535 907 Tu 1 . - CDS 1649686 - 1650021 592 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis - Prom 1650052 - 1650111 3.4 + Prom 1650055 - 1650114 4.4 1536 908 Tu 1 . + CDS 1650150 - 1650872 947 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 1650877 - 1650911 2.1 + Prom 1651012 - 1651071 2.2 1537 909 Tu 1 . + CDS 1651125 - 1651487 392 ## Kvar_2838 hypothetical protein + Prom 1651490 - 1651549 3.0 1538 910 Tu 1 . + CDS 1651708 - 1652013 347 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 1652021 - 1652080 2.6 1539 911 Op 1 . + CDS 1652254 - 1653555 1737 ## COG0642 Signal transduction histidine kinase 1540 911 Op 2 . + CDS 1653630 - 1654562 1142 ## Kvar_2841 DNA replication terminus site-binding protein - Term 1654488 - 1654547 5.5 1541 912 Tu 1 . - CDS 1654552 - 1655952 1740 ## COG0114 Fumarase - Prom 1656163 - 1656222 1.9 - Term 1656059 - 1656089 4.1 1542 913 Tu 1 . - CDS 1656289 - 1657935 472 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 1658006 - 1658065 3.0 + Prom 1658044 - 1658103 4.2 1543 914 Op 1 4/0.265 + CDS 1658137 - 1659315 1833 ## COG1482 Phosphomannose isomerase + Term 1659316 - 1659350 -0.9 1544 914 Op 2 . + CDS 1659403 - 1660983 1968 ## COG5339 Uncharacterized protein conserved in bacteria + Term 1660996 - 1661035 5.7 - Term 1660761 - 1660806 2.2 1545 915 Tu 1 . - CDS 1661023 - 1662051 1169 ## COG1609 Transcriptional regulators - Prom 1662123 - 1662182 2.9 + Prom 1662045 - 1662104 4.6 1546 916 Op 1 3/0.346 + CDS 1662225 - 1663817 2159 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1547 916 Op 2 . + CDS 1663870 - 1665042 1593 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 1548 917 Tu 1 . - CDS 1665056 - 1666084 1175 ## COG0598 Mg2+ and Co2+ transporters - Prom 1666291 - 1666350 2.5 + Prom 1666238 - 1666297 4.2 1549 918 Tu 1 . + CDS 1666384 - 1666587 303 ## Kvar_2850 selenium-binding protein YdfZ + Term 1666611 - 1666647 4.0 - Term 1666480 - 1666516 1.1 1550 919 Tu 1 . - CDS 1666657 - 1667127 572 ## Kvar_2851 hypothetical protein - Prom 1667207 - 1667266 3.5 + Prom 1667286 - 1667345 2.0 1551 920 Tu 1 . + CDS 1667373 - 1667726 593 ## COG3759 Predicted membrane protein + Term 1667784 - 1667810 -0.6 1552 921 Op 1 10/0.030 + CDS 1667830 - 1669041 1375 ## COG2391 Predicted transporter component 1553 921 Op 2 . + CDS 1669038 - 1669271 353 ## COG0425 Predicted redox protein, regulator of disulfide bond formation - Term 1669259 - 1669297 -0.1 1554 922 Tu 1 . - CDS 1669439 - 1669621 73 ## + Prom 1669401 - 1669460 6.9 1555 923 Tu 1 . + CDS 1669532 - 1669924 473 ## COG5562 Phage envelope protein 1556 924 Tu 1 . - CDS 1669963 - 1670121 315 ## COG0401 Uncharacterized homolog of Blt101 - Prom 1670225 - 1670284 2.8 + Prom 1670108 - 1670167 4.7 1557 925 Tu 1 . + CDS 1670404 - 1671402 1450 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Term 1671381 - 1671441 2.8 1558 926 Tu 1 . - CDS 1671451 - 1672890 1673 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 1672910 - 1672969 2.4 - Term 1673038 - 1673083 10.3 1559 927 Tu 1 . - CDS 1673088 - 1673888 991 ## COG1434 Uncharacterized conserved protein - Prom 1674038 - 1674097 8.5 + Prom 1674015 - 1674074 5.5 1560 928 Tu 1 . + CDS 1674269 - 1675594 1821 ## COG0477 Permeases of the major facilitator superfamily - Term 1675702 - 1675750 1.2 1561 929 Op 1 . - CDS 1675805 - 1677235 2057 ## COG1113 Gamma-aminobutyrate permease and related permeases 1562 929 Op 2 5/0.153 - CDS 1677245 - 1678240 1144 ## COG2988 Succinylglutamate desuccinylase 1563 929 Op 3 7/0.057 - CDS 1678251 - 1679591 1670 ## COG3724 Succinylarginine dihydrolase 1564 929 Op 4 8/0.039 - CDS 1679613 - 1681079 1743 ## COG1012 NAD-dependent aldehyde dehydrogenases 1565 929 Op 5 7/0.057 - CDS 1681070 - 1682092 1384 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 1566 929 Op 6 . - CDS 1682111 - 1683316 1573 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 1683389 - 1683448 2.6 + Prom 1683704 - 1683763 5.1 1567 930 Tu 1 . + CDS 1683845 - 1685119 1819 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 1685141 - 1685175 8.1 - Term 1685021 - 1685052 1.5 1568 931 Op 1 . - CDS 1685184 - 1685837 641 ## COG0560 Phosphoserine phosphatase 1569 931 Op 2 . - CDS 1685818 - 1686603 869 ## Kvar_2869 A-factor biosynthesis repeat-containing protein 1570 931 Op 3 1/0.538 - CDS 1686617 - 1687822 1251 ## COG0183 Acetyl-CoA acetyltransferase 1571 931 Op 4 . - CDS 1687825 - 1689309 1433 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1572 931 Op 5 . - CDS 1689371 - 1690435 1409 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1573 931 Op 6 . - CDS 1690432 - 1691619 1239 ## COG2814 Arabinose efflux permease 1574 931 Op 7 . - CDS 1691669 - 1692667 1348 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 1692691 - 1692750 5.0 1575 932 Tu 1 3/0.346 + CDS 1692981 - 1693682 900 ## COG0583 Transcriptional regulator + Prom 1693734 - 1693793 4.4 1576 933 Op 1 18/0.000 + CDS 1693820 - 1694251 716 ## COG1846 Transcriptional regulators 1577 933 Op 2 19/0.000 + CDS 1694251 - 1695903 2267 ## COG0477 Permeases of the major facilitator superfamily 1578 933 Op 3 4/0.265 + CDS 1695932 - 1697017 1356 ## COG1566 Multidrug resistance efflux pump 1579 933 Op 4 . + CDS 1697014 - 1698384 485 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 1580 934 Tu 1 . + CDS 1698488 - 1699147 702 ## COG4122 Predicted O-methyltransferase + Term 1699387 - 1699428 2.5 - Term 1699194 - 1699232 4.4 1581 935 Tu 1 . - CDS 1699248 - 1700048 292 ## KPK_2983 hypothetical protein - Prom 1700146 - 1700205 2.9 1582 936 Tu 1 . - CDS 1700290 - 1704192 5069 ## COG1643 HrpA-like helicases - Prom 1704332 - 1704391 2.2 + Prom 1704256 - 1704315 2.6 1583 937 Tu 1 . + CDS 1704396 - 1705001 999 ## COG1182 Acyl carrier protein phosphodiesterase + Term 1705008 - 1705043 8.1 + Prom 1705066 - 1705125 2.3 1584 938 Op 1 . + CDS 1705244 - 1705576 278 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 1585 938 Op 2 . + CDS 1705578 - 1705862 287 ## Kvar_2885 XRE family transcriptional regulator - Term 1705720 - 1705746 1.0 1586 939 Op 1 1/0.538 - CDS 1705895 - 1706491 803 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 1587 939 Op 2 2/0.421 - CDS 1706501 - 1707427 1176 ## COG3327 Phenylacetic acid-responsive transcriptional repressor - Prom 1707458 - 1707517 3.5 1588 940 Op 1 1/0.538 - CDS 1707527 - 1708843 1650 ## COG1541 Coenzyme F390 synthetase 1589 940 Op 2 1/0.538 - CDS 1708870 - 1710075 1430 ## COG0183 Acetyl-CoA acetyltransferase 1590 940 Op 3 1/0.538 - CDS 1710075 - 1710497 409 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 1591 940 Op 4 7/0.057 - CDS 1710487 - 1711908 1308 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 1592 940 Op 5 12/0.016 - CDS 1711912 - 1712700 930 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 1593 940 Op 6 1/0.538 - CDS 1712703 - 1713470 934 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 1594 940 Op 7 2/0.421 - CDS 1713467 - 1714537 1158 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 1595 940 Op 8 4/0.265 - CDS 1714545 - 1715042 583 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 1596 940 Op 9 5/0.153 - CDS 1715054 - 1715809 1044 ## COG3396 Uncharacterized conserved protein 1597 940 Op 10 5/0.153 - CDS 1715817 - 1716104 467 ## COG3460 Uncharacterized enzyme of phenylacetate metabolism 1598 940 Op 11 . - CDS 1716116 - 1717045 1151 ## COG3396 Uncharacterized conserved protein - Prom 1717155 - 1717214 5.9 + Prom 1717078 - 1717137 6.2 1599 941 Tu 1 . + CDS 1717332 - 1719377 2351 ## COG1012 NAD-dependent aldehyde dehydrogenases 1600 942 Tu 1 . + CDS 1720394 - 1722661 3028 ## COG3733 Cu2+-containing amine oxidase - Term 1722499 - 1722556 -0.8 1601 943 Tu 1 . - CDS 1722664 - 1723614 993 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Term 1723625 - 1723660 5.7 1602 944 Op 1 . - CDS 1723670 - 1724488 878 ## COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 1603 944 Op 2 1/0.538 - CDS 1724513 - 1725670 1282 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1604 944 Op 3 1/0.538 - CDS 1725663 - 1726337 892 ## COG3342 Uncharacterized conserved protein 1605 944 Op 4 1/0.538 - CDS 1726334 - 1726768 779 ## COG0251 Putative translation initiation inhibitor, yjgF family 1606 944 Op 5 1/0.538 - CDS 1726793 - 1728052 1439 ## COG2072 Predicted flavoprotein involved in K+ transport - Prom 1728131 - 1728190 5.0 - Term 1728179 - 1728218 4.1 1607 945 Tu 1 . - CDS 1728221 - 1729135 275 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 1729367 - 1729426 3.7 + Prom 1729432 - 1729491 5.7 1608 946 Op 1 . + CDS 1729624 - 1731144 242 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 1609 946 Op 2 . + CDS 1731171 - 1732043 929 ## Kvar_2909 phytanoyl-CoA dioxygenase 1610 946 Op 3 . + CDS 1732067 - 1732897 1015 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1611 946 Op 4 . + CDS 1732903 - 1733634 1043 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1612 947 Tu 1 . - CDS 1733653 - 1734543 1174 ## COG1893 Ketopantoate reductase 1613 948 Tu 1 . - CDS 1734668 - 1736167 2018 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 1736318 - 1736377 3.4 1614 949 Tu 1 . + CDS 1736406 - 1737305 988 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 1737352 - 1737396 0.1 1615 950 Op 1 . - CDS 1737306 - 1737629 451 ## COG3784 Uncharacterized protein conserved in bacteria 1616 950 Op 2 . - CDS 1737637 - 1737822 294 ## KPK_3020 putative lipoprotein 1617 950 Op 3 . - CDS 1737819 - 1740458 3205 ## KPK_3021 hypothetical protein - Prom 1740500 - 1740559 3.1 + Prom 1740419 - 1740478 5.7 1618 951 Tu 1 . + CDS 1740725 - 1741165 490 ## COG0586 Uncharacterized membrane-associated protein + Prom 1741204 - 1741263 3.8 1619 952 Tu 1 . + CDS 1741313 - 1742302 1471 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Prom 1742332 - 1742391 2.4 1620 953 Tu 1 . + CDS 1742425 - 1742865 529 ## COG3187 Heat shock protein 1621 954 Tu 1 . - CDS 1742911 - 1743174 205 ## COG3042 Putative hemolysin + Prom 1743428 - 1743487 3.5 1622 955 Op 1 23/0.000 + CDS 1743537 - 1745846 1546 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 1623 955 Op 2 2/0.421 + CDS 1745471 - 1747063 2096 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit + Term 1747095 - 1747127 5.6 + Prom 1747215 - 1747274 8.4 1624 956 Tu 1 . + CDS 1747422 - 1748546 1765 ## COG3203 Outer membrane protein (porin) + Term 1748554 - 1748585 5.5 + Prom 1748578 - 1748637 3.5 1625 957 Op 1 . + CDS 1748689 - 1748901 252 ## Kvar_2924 hypothetical protein + Prom 1748903 - 1748962 4.5 1626 957 Op 2 1/0.538 + CDS 1748984 - 1749418 664 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 1749426 - 1749455 3.5 + Prom 1749482 - 1749541 1.5 1627 958 Tu 1 . + CDS 1749650 - 1750585 1268 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Term 1750574 - 1750623 8.9 1628 959 Tu 1 . - CDS 1750631 - 1752004 1525 ## COG0513 Superfamily II DNA and RNA helicases - Term 1752475 - 1752506 4.1 1629 960 Tu 1 . - CDS 1752530 - 1753513 964 ## COG0598 Mg2+ and Co2+ transporters - Prom 1753603 - 1753662 1.9 + Prom 1753704 - 1753763 4.2 1630 961 Op 1 1/0.538 + CDS 1753792 - 1754535 850 ## COG1349 Transcriptional regulators of sugar metabolism 1631 961 Op 2 . + CDS 1754552 - 1755616 1401 ## COG0673 Predicted dehydrogenases and related proteins + Prom 1755669 - 1755728 2.6 1632 962 Tu 1 . + CDS 1755853 - 1756047 337 ## Kvar_2931 hypothetical protein 1633 963 Tu 1 . - CDS 1756163 - 1756912 723 ## Kvar_2932 hypothetical protein - Prom 1756975 - 1757034 5.8 - Term 1757107 - 1757140 6.1 1634 964 Tu 1 . - CDS 1757148 - 1758524 1741 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 1758617 - 1758676 4.4 + Prom 1758584 - 1758643 2.9 1635 965 Tu 1 . + CDS 1758859 - 1759338 603 ## COG1522 Transcriptional regulators + Term 1759353 - 1759388 1.6 + Prom 1759432 - 1759491 3.6 1636 966 Op 1 . + CDS 1759589 - 1760203 952 ## COG1284 Uncharacterized conserved protein 1637 966 Op 2 . + CDS 1760242 - 1761441 1429 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase 1638 967 Op 1 32/0.000 - CDS 1761486 - 1762154 1091 ## COG2011 ABC-type metal ion transport system, permease component 1639 967 Op 2 10/0.030 - CDS 1762147 - 1763160 1109 ## COG1135 ABC-type metal ion transport system, ATPase component 1640 967 Op 3 . - CDS 1763169 - 1763975 886 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 1764124 - 1764183 5.3 + Prom 1764110 - 1764169 3.0 1641 968 Tu 1 . + CDS 1764196 - 1765371 1440 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 1642 969 Tu 1 . - CDS 1765418 - 1766452 1079 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 1766496 - 1766555 4.1 + Prom 1766432 - 1766491 3.5 1643 970 Tu 1 . + CDS 1766541 - 1767089 438 ## COG1309 Transcriptional regulator 1644 971 Op 1 1/0.538 - CDS 1767146 - 1768057 772 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 1645 971 Op 2 . - CDS 1768057 - 1768917 825 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 1768995 - 1769054 5.3 + Prom 1768860 - 1768919 2.3 1646 972 Tu 1 . + CDS 1769008 - 1769931 1148 ## COG0583 Transcriptional regulator - Term 1769851 - 1769883 0.5 1647 973 Tu 1 . - CDS 1769951 - 1770856 954 ## COG0583 Transcriptional regulator - Prom 1770890 - 1770949 3.5 + Prom 1770829 - 1770888 1.9 1648 974 Op 1 . + CDS 1770995 - 1771924 859 ## KPK_3052 NmrA family protein 1649 974 Op 2 . + CDS 1771950 - 1772156 262 ## KPK_3053 hypothetical protein + Term 1772188 - 1772227 1.4 - Term 1772002 - 1772034 1.1 1650 975 Tu 1 . - CDS 1772207 - 1773085 914 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1773159 - 1773218 3.2 1651 976 Tu 1 . + CDS 1773244 - 1773999 1027 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Term 1773936 - 1773969 4.4 1652 977 Tu 1 . - CDS 1774004 - 1774597 529 ## COG1309 Transcriptional regulator - Prom 1774642 - 1774701 2.5 + Prom 1774589 - 1774648 3.0 1653 978 Tu 1 . + CDS 1774671 - 1775384 280 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1654 979 Tu 1 . - CDS 1775451 - 1775945 325 ## Kvar_2953 hypothetical protein 1655 980 Op 1 1/0.538 - CDS 1776053 - 1776595 515 ## COG3521 Uncharacterized protein conserved in bacteria 1656 980 Op 2 9/0.037 - CDS 1776573 - 1777658 833 ## COG3520 Uncharacterized protein conserved in bacteria 1657 980 Op 3 . - CDS 1777622 - 1779376 2032 ## COG3519 Uncharacterized protein conserved in bacteria 1658 980 Op 4 5/0.153 - CDS 1779456 - 1781048 1235 ## COG3515 Uncharacterized protein conserved in bacteria 1659 980 Op 5 . - CDS 1781045 - 1784494 3002 ## COG3523 Uncharacterized protein conserved in bacteria 1660 980 Op 6 . - CDS 1784484 - 1785461 149 ## Spro_1797 hypothetical protein - Prom 1785507 - 1785566 2.1 1661 981 Op 1 . - CDS 1785614 - 1785871 114 ## COG4104 Uncharacterized conserved protein 1662 981 Op 2 . - CDS 1785914 - 1787032 149 ## Spro_1795 hypothetical protein - Prom 1787136 - 1787195 4.5 1663 982 Tu 1 . + CDS 1787062 - 1787244 60 ## 1664 983 Tu 1 . - CDS 1788307 - 1788504 96 ## Spro_1794 hypothetical protein - Prom 1788726 - 1788785 80.3 1665 984 Op 1 . - CDS 1789387 - 1789821 135 ## Kvar_2962 lipoprotein 1666 984 Op 2 . - CDS 1789917 - 1790126 112 ## Kvar_2962 lipoprotein 1667 984 Op 3 . - CDS 1790111 - 1790446 282 ## Kvar_2962 lipoprotein 1668 985 Op 1 . - CDS 1791832 - 1792167 186 ## Kvar_2962 lipoprotein - Prom 1792191 - 1792250 3.0 1669 985 Op 2 . - CDS 1792263 - 1792793 255 ## KPK_3058 putative lipoprotein 1670 985 Op 3 . - CDS 1792818 - 1793594 365 ## Spro_1791 hypothetical protein 1671 985 Op 4 3/0.346 - CDS 1793598 - 1795976 1745 ## COG3501 Uncharacterized protein conserved in bacteria 1672 985 Op 5 1/0.538 - CDS 1795969 - 1798623 1329 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Term 1798797 - 1798839 6.2 1673 986 Op 1 1/0.538 - CDS 1798888 - 1799379 748 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 1674 986 Op 2 1/0.538 - CDS 1799384 - 1801090 1024 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 1675 986 Op 3 8/0.039 - CDS 1801087 - 1801776 782 ## COG3455 Uncharacterized protein conserved in bacteria 1676 986 Op 4 1/0.538 - CDS 1801773 - 1803116 1207 ## COG3522 Uncharacterized protein conserved in bacteria 1677 986 Op 5 6/0.092 - CDS 1803126 - 1804670 2128 ## COG3517 Uncharacterized protein conserved in bacteria 1678 986 Op 6 . - CDS 1804713 - 1805204 484 ## COG3516 Uncharacterized protein conserved in bacteria - Prom 1805449 - 1805508 8.4 1679 987 Tu 1 . + CDS 1805833 - 1806399 760 ## COG0693 Putative intracellular protease/amidase + Term 1806442 - 1806495 10.3 1680 988 Tu 1 . - CDS 1806557 - 1807318 683 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 1807347 - 1807406 4.1 + Prom 1807262 - 1807321 2.4 1681 989 Tu 1 . + CDS 1807427 - 1808341 912 ## COG0583 Transcriptional regulator + Prom 1808355 - 1808414 4.1 1682 990 Tu 1 . + CDS 1808644 - 1808832 76 ## Kvar_2979 hypothetical protein + Term 1808854 - 1808889 5.2 1683 991 Op 1 . - CDS 1808886 - 1809329 355 ## Kvar_2980 anti-sigma regulatory factor, serine/threonine protein kinase 1684 991 Op 2 . - CDS 1809349 - 1809687 379 ## Kvar_2981 anti-sigma-factor antagonist 1685 991 Op 3 . - CDS 1809677 - 1810891 867 ## COG0784 FOG: CheY-like receiver 1686 991 Op 4 . - CDS 1810900 - 1811799 1028 ## KPK_3078 hypothetical protein 1687 991 Op 5 . - CDS 1811810 - 1813027 1126 ## COG4645 Uncharacterized protein conserved in bacteria - Prom 1813066 - 1813125 5.7 + Prom 1813034 - 1813093 5.8 1688 992 Op 1 . + CDS 1813304 - 1815121 1759 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 1689 992 Op 2 . + CDS 1815118 - 1816449 1336 ## KPK_3081 hypothetical protein 1690 992 Op 3 . + CDS 1816446 - 1817993 1720 ## KPK_3082 hypothetical protein 1691 992 Op 4 . + CDS 1817978 - 1819372 1388 ## KP1_2378 hypothetical protein 1692 992 Op 5 . + CDS 1819369 - 1819803 443 ## KP1_2377 hypothetical protein 1693 992 Op 6 . + CDS 1819806 - 1822499 2374 ## COG0642 Signal transduction histidine kinase 1694 992 Op 7 . + CDS 1822489 - 1824687 2037 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 1824799 - 1824826 -0.9 1695 993 Op 1 . - CDS 1824712 - 1824816 70 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 1696 993 Op 2 3/0.346 - CDS 1824859 - 1825581 815 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Term 1825607 - 1825652 -0.6 1697 993 Op 3 4/0.265 - CDS 1825660 - 1826862 943 ## COG2814 Arabinose efflux permease - Term 1826869 - 1826905 8.1 1698 993 Op 4 . - CDS 1826928 - 1827986 1040 ## COG1073 Hydrolases of the alpha/beta superfamily + Prom 1828138 - 1828197 5.4 1699 994 Tu 1 . + CDS 1828237 - 1829121 846 ## COG0583 Transcriptional regulator + Term 1829165 - 1829202 -0.8 + Prom 1829233 - 1829292 4.1 1700 995 Tu 1 . + CDS 1829453 - 1829839 399 ## COG0346 Lactoylglutathione lyase and related lyases + Term 1829936 - 1829972 6.3 - Term 1829922 - 1829958 7.1 1701 996 Op 1 . - CDS 1829984 - 1831771 1977 ## KPK_3093 hypothetical protein 1702 996 Op 2 24/0.000 - CDS 1831795 - 1832538 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1703 996 Op 3 . - CDS 1832535 - 1834103 1723 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Prom 1834245 - 1834304 3.0 1704 997 Tu 1 . + CDS 1834326 - 1835393 1210 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Term 1835333 - 1835370 1.2 1705 998 Tu 1 9/0.037 - CDS 1835390 - 1836334 845 ## COG0583 Transcriptional regulator - Term 1836392 - 1836435 -0.2 1706 999 Tu 1 . - CDS 1836506 - 1837393 909 ## COG0583 Transcriptional regulator - Prom 1837458 - 1837517 3.7 + Prom 1837407 - 1837466 4.2 1707 1000 Op 1 16/0.000 + CDS 1837489 - 1838277 640 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1708 1000 Op 2 34/0.000 + CDS 1838283 - 1839074 244 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 1709 1000 Op 3 . + CDS 1839074 - 1839748 671 ## COG0765 ABC-type amino acid transport system, permease component 1710 1000 Op 4 . + CDS 1839755 - 1841161 673 ## COG2079 Uncharacterized protein involved in propionate catabolism 1711 1001 Tu 1 . - CDS 1841199 - 1842815 2222 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 1842849 - 1842908 5.8 + Prom 1842809 - 1842868 3.9 1712 1002 Tu 1 . + CDS 1843001 - 1843708 826 ## COG2866 Predicted carboxypeptidase - Term 1843484 - 1843510 -0.3 1713 1003 Tu 1 . - CDS 1843705 - 1844670 1200 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 1844757 - 1844816 4.0 + Prom 1844682 - 1844741 4.1 1714 1004 Tu 1 . + CDS 1844773 - 1845279 735 ## COG2077 Peroxiredoxin + Term 1845288 - 1845327 3.2 - Term 1845274 - 1845314 3.0 1715 1005 Tu 1 . - CDS 1845351 - 1846403 1219 ## COG3180 Putative ammonia monooxygenase - Prom 1846430 - 1846489 5.1 - Term 1846435 - 1846471 1.7 1716 1006 Tu 1 . - CDS 1846504 - 1848045 1983 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism - Prom 1848075 - 1848134 5.6 1717 1007 Op 1 9/0.037 - CDS 1848273 - 1849334 1410 ## COG3768 Predicted membrane protein 1718 1007 Op 2 . - CDS 1849331 - 1850728 1571 ## COG3106 Predicted ATPase - Prom 1850757 - 1850816 4.2 - Term 1850759 - 1850798 -0.8 1719 1008 Op 1 . - CDS 1850831 - 1851049 389 ## Kvar_3008 phage shock protein PspD 1720 1008 Op 2 . - CDS 1851078 - 1851437 556 ## COG1983 Putative stress-responsive transcriptional regulator 1721 1008 Op 3 . - CDS 1851437 - 1851661 433 ## Kvar_3010 phage shock protein B 1722 1008 Op 4 . - CDS 1851717 - 1852385 1147 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Prom 1852463 - 1852522 6.0 + Prom 1852462 - 1852521 2.8 1723 1009 Tu 1 . + CDS 1852553 - 1853527 1267 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Term 1853402 - 1853443 11.0 1724 1010 Op 1 5/0.153 - CDS 1853518 - 1854909 2086 ## COG0477 Permeases of the major facilitator superfamily 1725 1010 Op 2 . - CDS 1854935 - 1856104 1441 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 1856180 - 1856239 5.0 + Prom 1856166 - 1856225 6.7 1726 1011 Tu 1 . + CDS 1856276 - 1858609 2308 ## COG3664 Beta-xylosidase 1727 1012 Tu 1 . - CDS 1858564 - 1859409 880 ## COG1396 Predicted transcriptional regulators - Prom 1859429 - 1859488 4.3 + Prom 1859435 - 1859494 3.4 1728 1013 Tu 1 . + CDS 1859517 - 1860422 1001 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 1860669 - 1860715 0.9 + Prom 1860576 - 1860635 4.7 1729 1014 Op 1 8/0.039 + CDS 1860756 - 1862399 1938 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 1730 1014 Op 2 . + CDS 1862396 - 1863361 586 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 + Term 1863468 - 1863522 10.0 + Prom 1863365 - 1863424 7.6 1731 1015 Tu 1 . + CDS 1863566 - 1864237 152 ## COG2135 Uncharacterized conserved protein + Prom 1864453 - 1864512 5.4 1732 1016 Tu 1 . + CDS 1864537 - 1865202 -95 ## gi|269967817|ref|ZP_06181862.1| hypothetical protein VMC_32920 + Prom 1865258 - 1865317 1.8 1733 1017 Tu 1 . + CDS 1865402 - 1865950 56 ## Alide2_1559 hypothetical protein - Term 1865942 - 1865983 1.4 1734 1018 Op 1 4/0.265 - CDS 1866115 - 1867302 317 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 1735 1018 Op 2 . - CDS 1867382 - 1867864 -36 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 1868055 - 1868114 2.7 1736 1019 Tu 1 . - CDS 1868853 - 1869173 122 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 1869278 - 1869337 1.6 1737 1020 Tu 1 . + CDS 1870133 - 1873090 126 ## SLGD_02237 phage tail fiber + Term 1873141 - 1873174 6.5 - Term 1873129 - 1873161 6.3 1738 1021 Tu 1 . - CDS 1873362 - 1873511 98 ## gi|290512894|ref|ZP_06552259.1| predicted protein - Prom 1873635 - 1873694 3.3 1739 1022 Tu 1 . - CDS 1874271 - 1874411 113 ## 1740 1023 Tu 1 . - CDS 1875051 - 1875719 159 ## Predicted protein(s) >gi|289777623|gb|GG745508.1| GENE 1 258 - 1556 1635 432 aa, chain + ## HITS:1 COG:STM2654 KEGG:ns NR:ns ## COG: STM2654 COG0477 # Protein_GI_number: 16765974 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 8 432 9 433 433 684 88.0 0 MTESSITERGAPDQADTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTT QLLQTAGVFAAGFLMRPIGGWLFGRIADRRGRKASMLISVCMMCFGSLVIACLPGYAVIG TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGKKGFYASFQYVTLIGGQLLAVLVV VALQQVLSDEDLHAWGWRIPFALGAVLAIVALWLRRQLDETSKQETRALKEAGSFKGLWR NRRAFVMVLGFTAAGSLTFYTFTTYMQKYLVNTAGMTASTASVIMTAALFVYMLVQPLFG AFSDKVGRRTSMLCFGVLATLFTVPILSALQKVSSPYAAFGLVICALLIVSFYTSISGIL KAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSAGVEHAFYWYVTVMAAIAFLVS LMLHRKGKGLRL >gi|289777623|gb|GG745508.1| GENE 2 1560 - 1865 303 101 aa, chain - ## HITS:1 COG:STM2653 KEGG:ns NR:ns ## COG: STM2653 COG5544 # Protein_GI_number: 16765973 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 2 99 8 105 107 149 85.0 1e-36 MTSLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIGLMFSIS LGASKELWDSRPAGSGWSWKDFAWDVAGATTGYAVWQLAHQ >gi|289777623|gb|GG745508.1| GENE 3 1925 - 3283 1357 452 aa, chain - ## HITS:1 COG:STM2652 KEGG:ns NR:ns ## COG: STM2652 COG1502 # Protein_GI_number: 16765972 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 2 432 1 431 451 802 89.0 0 MMLSKFKRNKHQQHLAQLPKLSQSVDDVEFFYAPADFREALLTRIAHATQRICIIALYLE QDDGGKGILQALYDAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMADENPGV DIPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYQCIRNGKM ADVMFDWVDNNLVQGRGVNRLDRPDRPKSPEIKNDIRQYRQELRDRSYHFVGTAGDEELS VTPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNLPAVLVRNIIQLLRDGKQVEIIVG DKTANDFYIPEDQPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLIVRLWKDDDNSYHLK GMWVDDEWMLLTGNNLNPRAWRLDLENAILIHDPKRQLGAMREKELKLIRTHTTVVKHYR DLQSIADYPVKVRKLIRRLRRIRIDRLISRIL >gi|289777623|gb|GG745508.1| GENE 4 3401 - 6052 2608 883 aa, chain - ## HITS:1 COG:STM2651_1 KEGG:ns NR:ns ## COG: STM2651_1 COG1042 # Protein_GI_number: 16765971 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Salmonella typhimurium LT2 # 1 709 1 709 709 1210 86.0 0 MSQRGLEALLRPKSIAVIGASMKPQRAGYLMMRNLLAGAFNGPVLPVTPAWKAVLGVLAW PTIESLPFTPDLAVLCTNARRNIELLEALGQKGCKTCIILSSQPEQYPALLECAARYQMR LLGPNSLGLLAPWQGLNASFSPVAIHRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL GDSLDIDVDDLLDFLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILVIKSGRSPA AQKLLHVNSGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGEKLMIVSNGAAP AALALDELWLRNGKLAVLSEETRDALRQALPVGVEIANPLDLRDDASSEHYQQAVNILLN SQDYDALLVIHSPSAAAPGTESALALIDALKHHPRGKYVTVLTNWCGEFSSQEARRLFSD AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPVLPDSLTANTSEAHALLQQAIDDGATT LDTHEVSPVLRAYGIHTLPTWIAADSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML YLRTAAEVQQAADAMIDRVRLAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM LGEGGVEWRAEDQAAVALPPLNMNLARYLVIQAIKNKKIRGRSALRPLDIAGLSQLLVQV SNLIVDCPEIQRLDIHPLLASGNEFTALDVTLGLAPFDGDSESRLAIRPYPHQQEEWVVM KNGDRCLFRPILPEDEPQLLAFIAQVTKEDLYYRYFSEINEFTHDDLANMTQIDYDREMA FVAVRTTAEKSEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLLEKLIAYTQSHGL QRLNGITMPNNRGMIGLARKLGFTVDIQLEDGIVSLSLPLNQG >gi|289777623|gb|GG745508.1| GENE 5 6087 - 6785 427 232 aa, chain - ## HITS:1 COG:ECs3449 KEGG:ns NR:ns ## COG: ECs3449 COG3148 # Protein_GI_number: 15832703 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 232 9 240 240 384 82.0 1e-106 MIENAVLRLRAERLARATRPFLARGNRIRRCQRCLLPLKQCLCATLVPAQATSRFCLVMF DTEPMKPSNTGRLIADILPDTEAFQWSRTEPPQGLLDLVAHPDYQPMVVFPASYAGPERQ ILSAPPSGKPPLFIMLDGTWTEARKMFRKSPYLDALPIISVDLSRISAYHLREAHADGQY CTAEVAIALLDLAGDAPAAAALGEHFTRFRTRYLAGKTQHKGSITADQVENV >gi|289777623|gb|GG745508.1| GENE 6 6855 - 7280 320 141 aa, chain - ## HITS:1 COG:STM2649 KEGG:ns NR:ns ## COG: STM2649 COG0526 # Protein_GI_number: 16765969 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 138 1 138 139 261 86.0 4e-70 MNTVCASCQALNRLPDDRSADGAKCGRCGHDLFDGDVINATGATLDKLLKDDLPVVVDFW APWCGPCRSFAPIFEDVAEERSGKMRFVKVNTEAERELSARFRIRSIPTIMMFKNGEVID MLNGAVPKAPFDSWLNEAGQQ >gi|289777623|gb|GG745508.1| GENE 7 7484 - 8569 1276 361 aa, chain + ## HITS:1 COG:STM2648 KEGG:ns NR:ns ## COG: STM2648 COG0566 # Protein_GI_number: 16765968 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Salmonella typhimurium LT2 # 1 361 1 345 345 549 79.0 1e-156 MSDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRVDGRSRPARDERNSRGD DRKRADRKRDDRKRDDFHRDDASPWRTVSRAPGDETPVKEDHGGISGKSFIDPEVLRRQR AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELAK ASGTEHHGGVCFLIKKRHGTSVAQWVAKAAEEDCVLALEDVGNPHNLGAIMRSCAHFGVK GVVVQDAGVLESGAAIRTAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVSTSSHNGTPLF KAELPKKMVLVLGQERDGLSDAAISSSDLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK A >gi|289777623|gb|GG745508.1| GENE 8 8627 - 9316 734 229 aa, chain - ## HITS:1 COG:ung KEGG:ns NR:ns ## COG: ung COG0692 # Protein_GI_number: 16130505 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Escherichia coli K12 # 1 229 1 229 229 427 90.0 1e-120 MTTSLTWHDVLADEKQQPYFLNTLKTVAEERQSGITIYPPQKDVFNAFRFTELGDVKVVI LGQDPYHGPGQAHGLAFSVRPGVAIPPSLLNMYKELEATIPGFTRPTHGYLESWARQGVL LLNTVLTVRAGQAHSHASLGWETFTDKVIALINEHCEGVVFLLWGSHAQKKGAIIDRQRH CVLKAPHPSPLSAHRGFFGSNHFVQTNQWLADRSEAPIDWMPVLPAESE >gi|289777623|gb|GG745508.1| GENE 9 9627 - 10010 554 127 aa, chain + ## HITS:1 COG:STM2646 KEGG:ns NR:ns ## COG: STM2646 COG3445 # Protein_GI_number: 16765966 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 236 93.0 1e-62 MITGIQITKAANDDLLNSFWLLDSEKGEARCLCAKGGFAEDDVVAVSKLGEIEYREIPVD VKPEVRVEGGQHLNVNVLRRETLLDAVEHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|289777623|gb|GG745508.1| GENE 10 10056 - 11387 1631 443 aa, chain - ## HITS:1 COG:ECs3442 KEGG:ns NR:ns ## COG: ECs3442 COG0513 # Protein_GI_number: 15832696 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 443 1 444 444 716 90.0 0 MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLVLDEADRMLDMGFAQDIETIAGETRW RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADDIEHKTALLI HLLKQPEATRSIVFVRKRERVHELAAKLHEAGINTCWLEGEMVQIKRNEAIKRLTDGRVN VLIATDVAARGIDIPDVSHVFNFDMPRTADIYLHRIGRTGRAGKKGIAISLVEAHDHLLL GKIGRYVEEPLKARVIDELRPKTRAPSEKLTGKPSKKVLAKRAEKKEKEKEKPRVKKRHR DTKNIGKRRKPSAAGTPSTSTEE >gi|289777623|gb|GG745508.1| GENE 11 11518 - 12255 567 245 aa, chain + ## HITS:1 COG:yfiC KEGG:ns NR:ns ## COG: yfiC COG4123 # Protein_GI_number: 16130500 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli K12 # 1 245 41 285 285 384 76.0 1e-107 MSQSKFALPRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPIAGVKHVLDIGAGSGLLAL MLAQRTGHDVQVDAVELDEEAAAQARENALASPWSSRIEICQADIHQWQPSQTRRYELII SNPPFFAEGVPCATSQREQARYTTTLDHASLLTCAAEHITEEGFFCVVLPVDIGNAFIER ATAMGWHLRLRTDVAETELRPPHRVLLAFSPTAGECFSDRLAIRGPEQQYSEGFTALTGD FYLFM >gi|289777623|gb|GG745508.1| GENE 12 12240 - 13859 1742 539 aa, chain - ## HITS:1 COG:nadB KEGG:ns NR:ns ## COG: nadB COG0029 # Protein_GI_number: 16130499 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Escherichia coli K12 # 1 536 1 536 540 1008 88.0 0 MNTTPDFSCDVLIIGSGAAGLSLALRLAEHSSVTVLSKGPISEGSTFYAQGGIAAVFDET DSIESHVEDTLIAGAGLCDRHAVTFVASNARPCVQWLIDQGVLFDTQVQANGEESYHLTR EGGHSHRRILHAADATGKAVETTLVDKALAHPNIRIIERSNAVDLIVSDKIGLPGTRRVV GAWIWNRNKERVETCSAKAVVLATGGAAKVYQYTTNPDVSSGDGIAMAWRAGCRVANLEF NQFHPTALYHPQARNFLLTEALRGEGAHLKRPDGTRFMPDFDERGELAPRDIVARAIDHE MKRLGVDCMFLDISHKPEAFVRQHFPMIYEKLLGLGIDLTKDPVPVVPAAHYTCGGVMVD DNGRTDVDGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIARRLPLAQKVTTLP AWDESQVEIPDELVVIQHNWHELRLLMWDYVGIVRTTRRLERALRRITMLQQELDEYYAR FRVSNNLLELRNLVQVAELIVRCAMLRKESRGLHYTLDYPQPLPNSGPSILSPLAHIKR >gi|289777623|gb|GG745508.1| GENE 13 14280 - 14855 289 191 aa, chain + ## HITS:1 COG:STM2640 KEGG:ns NR:ns ## COG: STM2640 COG1595 # Protein_GI_number: 16765960 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 351 96.0 4e-97 MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPPGDIADVVQESFVKAWRA LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANEAENFESGGALKEISNPEN LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIRR >gi|289777623|gb|GG745508.1| GENE 14 14888 - 15538 550 216 aa, chain + ## HITS:1 COG:ECs3438 KEGG:ns NR:ns ## COG: ECs3438 COG3073 # Protein_GI_number: 15832692 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli O157:H7 # 1 216 1 212 212 290 82.0 1e-78 MQKEQLSALMDGETLDKELLNELSRSSEMQKTWESYHLIRDTLRGDTAEVLQFDISARVM AAIENEPVRQTAPLIPESQPAPHQWRQMPFWNKVRPWASSLTQMGVAACVSLAVIVGVQH YNGQSDATQQPEAPVFNTLPMMGKASPVSLGVPADASAGSGQQAQVQEQRRRINAMLQDY ELQRRLHAEQLQFGQAQTQQAAVQVPGYQTLGTQSQ >gi|289777623|gb|GG745508.1| GENE 15 15538 - 16494 804 318 aa, chain + ## HITS:1 COG:ECs3437 KEGG:ns NR:ns ## COG: ECs3437 COG3026 # Protein_GI_number: 15832691 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 510 80.0 1e-144 MKQLWCAMSLMAGSLLFSVNASADTSSGALLQQMNLASQSLNYELSFVSINKQGVESLRY RHARLNNQPLAQLLQLDGPRREVVLRGTEISYFEPGLDPFTLNGDYIVDSLPSLVYSDFK RLSAAYDFISVGRTRIADRLCDVIRVVARDGTRYSFIAWLDAETKLPLRVDLLDRDGETL EQFRVVSFNVGDNVSASMETLAKANLPPQLSVPEGGDQANFNWAPTWLPQGMAEVSSSQR RLPTFDGPVESRLYSDGLFSFSININRATAASSDQLLRTGRRTVSTTVRDNAEITVVGEL PPQTAKRISDSIKFKAVQ >gi|289777623|gb|GG745508.1| GENE 16 16491 - 16970 543 159 aa, chain + ## HITS:1 COG:rseC KEGG:ns NR:ns ## COG: rseC COG3086 # Protein_GI_number: 16130495 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Escherichia coli K12 # 1 159 1 159 159 231 75.0 6e-61 MIKEWATVVSWHNGVAQVHCDVKASCSSCASRAGCGSRVLNKLGPQTSHTISVPCEQPLA AGQKVELGIAESSLLGSALLVYMAPLVGLFVMASIFQVLFASDIASLCGALLGGVGGFLV ARGLSPQLAARQSWQPVILSVGLPPDLLRVDTPSSEMGQ >gi|289777623|gb|GG745508.1| GENE 17 17156 - 18955 2469 599 aa, chain + ## HITS:1 COG:YPO2716 KEGG:ns NR:ns ## COG: YPO2716 COG0481 # Protein_GI_number: 16122920 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Yersinia pestis # 1 599 1 599 599 1122 92.0 0 MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMAAQVLDSMDLERERGITIKAQSVT LDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPERVADEIEDIVGIDAHDAVRCSAKTGVGVPDVLERLVRDI PPPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGTMRKGDKIKVMSTGQVYNADRLGIF TPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTAARNPADKALPGFKKVKPQVYAGLF PVSSDDYENFRDALGKLSLNDASLFYEPESSTALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYEVETTSKEVIYVDSPSKLPPLNNIQELREPIAECHMLLPQEFLGNVIT LCIEKRGVQTNMVYHGKQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASNM VRVDVLINGERVDALALITHNDNAPYRGRELVEKMKELIPRQQFDIAIQAAIGNHIIARS TVKQLRKNVLAKCYGGDVSRKKKLLQKQKEGKKRMKQVGNVELPQEAFLAILHVGKDGK >gi|289777623|gb|GG745508.1| GENE 18 18969 - 19943 1192 324 aa, chain + ## HITS:1 COG:ECs3434 KEGG:ns NR:ns ## COG: ECs3434 COG0681 # Protein_GI_number: 15832688 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 600 90.0 1e-171 MANMFALILVIATLVTGLLWCLDKFIFAPKRRERQAAAQAATGEQLDKKTLKKVGPKPGW LETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL IETGHPKRGDIVVFKYPEDPRLDYIKRAVGLPGDKVTYDPVAKQVTIQPGCSSGQACGNA LPVTYSNVEPSDFVQTFSRSNGGEASSGFWQLPKGETKADGIRLTERQETLGDVTHRILM VPIAQDQVGMYYHQSGLPLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKATAI WMSFEKQEGEWPTGVRLSRIGGIH >gi|289777623|gb|GG745508.1| GENE 19 20193 - 20873 721 226 aa, chain + ## HITS:1 COG:ECs3433 KEGG:ns NR:ns ## COG: ECs3433 COG0571 # Protein_GI_number: 15832687 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 411 96.0 1e-115 MNPIVINRLQRKLGYTFHHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI GGVFLDSDIQNVERLILSWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE >gi|289777623|gb|GG745508.1| GENE 20 20870 - 21775 1162 301 aa, chain + ## HITS:1 COG:STM2580 KEGG:ns NR:ns ## COG: STM2580 COG1159 # Protein_GI_number: 16765900 # Func_class: R General function prediction only # Function: GTPase # Organism: Salmonella typhimurium LT2 # 1 301 1 301 301 582 96.0 1e-166 MSEEKSYCGFVAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGPYQAIY VDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTQDDEMVLNKLRDAKAPVI LAVNKVDNVQDKAELLPHLQFLASQMNFLDIVPISAETGTNVDTIAAIVRKHLPEAIHHF PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVTNERGGYDINGLILVERE GQKKMVIGNKGAKIKTIGIEARKDMQDMFEAPVHLELWVKVKSGWADDERALRSLGYVDD L >gi|289777623|gb|GG745508.1| GENE 21 21787 - 22524 630 245 aa, chain + ## HITS:1 COG:STM2579 KEGG:ns NR:ns ## COG: STM2579 COG1381 # Protein_GI_number: 16765899 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Salmonella typhimurium LT2 # 1 238 1 238 242 433 90.0 1e-121 MDGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRF GGRGEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQAL AGTSGSPEPALRRFELALLGHLGYGVDFLHCAGSGEPVDDTMTYRYREEKGFIASLVIDN NTFTGHHLKALASREFPDVDTLRAAKRFTRIALKPYLGGKPLKSRELFRQFMPARKARAD NTNND >gi|289777623|gb|GG745508.1| GENE 22 22536 - 23267 1181 243 aa, chain + ## HITS:1 COG:ECs3430 KEGG:ns NR:ns ## COG: ECs3430 COG0854 # Protein_GI_number: 15832684 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 417 93.0 1e-117 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRI LRETLHTRMNLEMAVTEEMLTIACETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDAC QRLADAGILVSLFIDADNEQIKAAADVGAPYIEIHTGCYADAKTDAGQAKELERIAKAAT YAASLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAIIGRAVMSGLKEAVAEMKRLMLE ARG >gi|289777623|gb|GG745508.1| GENE 23 23267 - 23647 414 126 aa, chain + ## HITS:1 COG:acpS KEGG:ns NR:ns ## COG: acpS COG0736 # Protein_GI_number: 16130488 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli K12 # 1 126 1 126 126 213 87.0 8e-56 MAILGLGTDIVEIARIEAVIARSGDRLARRVLSDHEWSIWEQHQQPVRFLAKRFAVKEAA AKALGTGIRNGLAFNQFEVYNDELGKPKLRLWGEAKLLAERMGVRAIHVTLADERHYACA TVIVES >gi|289777623|gb|GG745508.1| GENE 24 23660 - 23920 287 86 aa, chain - ## HITS:1 COG:STM2576 KEGG:ns NR:ns ## COG: STM2576 COG1145 # Protein_GI_number: 16765896 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 86 1 86 86 150 94.0 4e-37 MALLITKKCINCDMCEPECPNEAILMGDSIYEINSDRCTECVGHYDTPTCQKVCPIPNTI LKDPAHVESEEQLWDKFVLMHHADKI >gi|289777623|gb|GG745508.1| GENE 25 23977 - 24825 1101 282 aa, chain - ## HITS:1 COG:STM2572 KEGG:ns NR:ns ## COG: STM2572 COG1737 # Protein_GI_number: 16765892 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 282 1 282 282 447 85.0 1e-125 MNCLTRIRQRYPTLAASDKKLADYILSQPDETRHLSSQQLAAEAGVSQSSVVKFAQKLGF KGFPALKLALSEALASSPDPHSVPVHNHIRGDDPLRLVGEKLIKDNVAAMHASLDVNTEE TLREAVTLLRNARRVIVTGIGASGLVARNFSWKLMKIGINAVSEQDMHALLATVQAMSSD DLLLAISYSGERREINMAAGEALRVGCKILAITGFSPNALQQQATHCLYTIAEEQATRSA AISSTSAQMMLTDLLFMGLVQQDLERAPERIRHSEALVKKLV >gi|289777623|gb|GG745508.1| GENE 26 25038 - 25673 694 211 aa, chain + ## HITS:1 COG:STM2569 KEGG:ns NR:ns ## COG: STM2569 COG0560 # Protein_GI_number: 16765889 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 305 77.0 4e-83 MQHNERKVVFFDLDGTLHQQDMFGSFLRYLLRNLPLNLLLVVAMGPAILAGLAVCGRAAR WPMSLLLWASTFGRREAVLKRLEAEFVGWFRHHVTAFPVVHARLTAYLTSTDADVWLITG SPQSLVEQVYRDTLWLPRVNLIASRTARRWGGWVLTLRCLGHEKVVQLEKKIGAPLRLYS GYSDSEQDNPLLGFCQHRWRVTPQGELQQLE >gi|289777623|gb|GG745508.1| GENE 27 25769 - 26245 527 158 aa, chain + ## HITS:1 COG:yfhC KEGG:ns NR:ns ## COG: yfhC COG0590 # Protein_GI_number: 16130484 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli K12 # 1 155 23 177 178 275 85.0 2e-74 MRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQ NYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRVE ISEGVLAESCSTMLSDFFRWRREEKKALKKAREQTGEG >gi|289777623|gb|GG745508.1| GENE 28 26242 - 27858 1801 538 aa, chain - ## HITS:1 COG:STM2567 KEGG:ns NR:ns ## COG: STM2567 COG4623 # Protein_GI_number: 16765887 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Salmonella typhimurium LT2 # 28 520 1 490 514 763 75.0 0 MPHIRRQPCVFSGHRLLRNLKLQKINALKKLKINYLLIGIVTLLLAAALWPSIPWSSKPE NRVAGIIARGELRISTINSPMTFATMNDKTFGLDYELAKQFADYLGVTLKITVRQNISQL FDDLDDGQADMLAAGLVYNQERVKNYQAGPTYYSVSQQLVYRVGNIRPRTLASLTAEQLT IAPGHVAINDLQALKAEKYPDLTWRVDEKRGTTALMQAVIDGKLDYTVADSVAVSLFQRV HPELAVALDITDEQPVTWFSARGEDNSLSAAMLDFFNNINEDGTLARLEEKYLGHGNDFD YVDTRTFLRAVENILPDVQPLFEKYAREIDWRLLAAIAWQESHWDPQATSPTGVRGMMML TRNTAQSLGLTDRTDAAQSIDGGMRYLQDMMDKVPDSIPKDERIWFALAAYNMGYAHMLD AMALTRKQKGNPNSWADVKLRLPLLSQKPYYSKLKYGYARGHEAYAYVENIRKYQISLVG YLSEKERQQQQTLALAEDYPAVLPNELEQPQETTLPFFKFRADKQMDNARLKLPGHLY >gi|289777623|gb|GG745508.1| GENE 29 28037 - 31921 5053 1294 aa, chain + ## HITS:1 COG:ECs3423_1 KEGG:ns NR:ns ## COG: ECs3423_1 COG0046 # Protein_GI_number: 15832677 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Escherichia coli O157:H7 # 1 984 2 985 985 1841 91.0 0 MEILRGSPALSAFRINKLLARFQAANLPVSAIYAEYIHFADLNAPLSADDRERLARLLQY GPSLSSHTPTGKLLLVTPRPGTISPWSSKATDIAHNCGLTQVVRLERGVAYYVEASTLTE AQWTAVAAELHDRMMESVFDALEAGETLFAHHQPTPVTSVDLLGEGRQALIDANLRLGLA LADDEIDYLQDAFTRLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGEQQPKSLFKMI KNTFEKTPDYVLSAYKDNAAVMEGSEVGRYFADHQTGRYDFHQEPAHILMKVETHNHPTA ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPDRIVT ALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVTSHNGEELRGYHKPIMLAGGIGNIR GEHVQKGEITVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRC QEVIDRCWQLGDDNPILFIHDVGAGGLSNAMPELVSDGGRGGKFQLRDILSDEPGMSPLE IWCNESQERYVLAVAPEQLPLFDELCRRERAPYAVIGEATAEQHLSLSDSHFNDQPIDLP LDVLLGKTPKMTRDVQTLKAQGSALDRQPITLADAVNRVLHLPTVAEKTFLVTIGDRTVT GMVARDQMVGPWQIPVANCAVTTASLDSYYGEAMAMGERAPVALLDFAASGRLAVGEALT NIAATQIGELNRVKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSM KTRWQEGSEQREMTSPLSLVISAFARVEDVRHTVTPQLSTEDNALLLIDLGKGHNALGAT ALAQVYRQLGDKPADVRDVAQLKGFWDAMQALVAQRKLLAYHDRSDGGLLVTLAEMAFTG HCGLEADIAALGDDRLAALFNEELGAVIQVRAADREAVEAILAVNGLADCVHYLGKAVEG DRFVLTANGQTVFSESRTTLRMWWAETTWQMQRLRDNPACADQEHEAKANDADPGLNVKL SFEINDDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLAGRTG LGDFHALVACGGFSYGDVLGAGEGWAKSILFNERVRDEFATFFHRPQTLALGVCNGCQMM SNLRELIPGSDLWPRFVRNQSDRFEARFSLVEVTQSPSLLLEGMVGSRMPIAVSHGEGQV EVRDSAHLAQLESKGLVALRFVDNFGKVTETYPANPNGSPNGITAVTSESGRATIMMPHP ERVFRTVSNSWHPENWGEDSPWMRIFRNARKQLG >gi|289777623|gb|GG745508.1| GENE 30 32513 - 33934 1653 473 aa, chain + ## HITS:1 COG:STM2564 KEGG:ns NR:ns ## COG: STM2564 COG0642 # Protein_GI_number: 16765884 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 469 5 473 480 693 79.0 0 MKRLSLFPRSLRQLVTLSFVLILLPLLVLAWQAWQSLNALSAQAAHINRTTLVDARRSEA MINAALEMERSYRQYCVLDDPTLARVYQNQRQRYSQMLDAHAGVLPDEKLWQALRQDVSD LAQLQCKNSSPDAQAAARLEVFASNNSDMVQATRAVVYSRGQQLQQEIAERGQFFGWQAL VLFLLSLALVLLFTRMIIGPVKGIERMINQLGAGKSLDDAALFTGPRELRSVGKRIIWLS ERLAWLESQRHQFLRHLSHELKTPLASMREGTELLADRVAGPLTPEQQEIVEILDSSSRN LQKLIEQLLDYNRKQADSPVAREAVDLVDLVENVVAAHSLPARAKLMHTELTLQARRCLA EPALLISVMDNLYSNAVHYGAESGNIRIHSYRHGEQVRIDVANSGEPIPAAEKNMIFEPF YQGSHQRKGAVKGSGLGLSIARDCVRQMQGELSLVDAPAGQVCFRITLPSAPE >gi|289777623|gb|GG745508.1| GENE 31 33943 - 34650 665 235 aa, chain + ## HITS:1 COG:no KEGG:KP1_4134 NR:ns ## KEGG: KP1_4134 # Name: yfhG # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 235 1 235 235 431 98.0 1e-119 MNRYRGTMSQFLAWRRSLRGWLLSGIACLTLAGCSAGFSPHTAEGTAASGQAQHQVADFV AVDCADIWAHSSDASDKNPLYWLRGIDCADRLAPAQARAEAKRHTDDSWQDAFRRGILLA DAKITPDERRDLVARLDTFSPQIAVQVRPLYQLWRDGQTRQLQLVEERARYAKLQQSSDS ELETLRQQEQALREQLELTTRKLENLTDIERQLSSRKPGGNFGSEKVPEVIHDDP >gi|289777623|gb|GG745508.1| GENE 32 34637 - 35974 1775 445 aa, chain + ## HITS:1 COG:STM2562 KEGG:ns NR:ns ## COG: STM2562 COG2204 # Protein_GI_number: 16765882 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 1 445 1 445 445 791 91.0 0 MTIRKPARLLLVDDDPGLLKLLGMRLVSEGYSVVTAESGPEALRVLGREKVDLVISDLRM DEMDGLQLFSEIQKGLPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYKAIDE ALEQRSPATDEAWRQAIVTRSPLMLRLLEQAGMVAQSDVSVLINGQSGTGKEIVAQAIHN ASPRHDKPFVAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGD MPVALQVKLLRVLQERKVRPLGSNRDIEINVRIISATHRDLPKAMARGEFREDLFYRLNV VNLKIPPLSERAEDIPLLANHLLRQSADRHKPFVRAFSSDAMKRLMAAKWPGNVRQLVNV IEQCVALTSSPVIGDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAAR MAGRNRTEFYKLLSRHELDANDFKE >gi|289777623|gb|GG745508.1| GENE 33 36040 - 36378 608 112 aa, chain + ## HITS:1 COG:ECs3419 KEGG:ns NR:ns ## COG: ECs3419 COG0347 # Protein_GI_number: 15832673 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 187 99.0 6e-48 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVTDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI >gi|289777623|gb|GG745508.1| GENE 34 36453 - 37643 1781 396 aa, chain - ## HITS:1 COG:ZhmpA_2 KEGG:ns NR:ns ## COG: ZhmpA_2 COG1018 # Protein_GI_number: 15803077 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 EDL933 # 150 396 1 247 247 406 77.0 1e-113 MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFAHNPELKEIFNMSNQRNGDQREALFNA IAAYASNIDNLPALLPAVEKIAQKHTSFQIKPEQYNIVGSHLLATLDEMFSPGQEVLDAW GKAYGVLANVFIGREAEIYQQNASKTGGWEGTRAFRIVKKTPRSQLITSFELEPVDGQPV ADYQPGQYLAIWLKPEGFEYQEIRQYSLTRKADGKGYRIAVKREDGGQVSSWLHNHASEG DVVYLAAPAGDFFLNVEPQTPVTLLSGGVGQTPMLAMLDALAKSGHQGQVNWFHAAENGD VHAFADEVSALGAALPAFTSHVWYRNPSEADRQTGRFDSEGLMDLAAVADNIRAPQMQFY LCGPVAFMQFAAKQLVELGVNKDNIHYECFGPHKVL >gi|289777623|gb|GG745508.1| GENE 35 37969 - 39222 1767 417 aa, chain + ## HITS:1 COG:STM2555 KEGG:ns NR:ns ## COG: STM2555 COG0112 # Protein_GI_number: 16765875 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Salmonella typhimurium LT2 # 1 417 1 417 417 798 97.0 0 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN LAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDDMAKQAQEHKPKMIIGGFSAYSGI VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGSEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVE VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEAVIERVKGKVLDICARFPVYA >gi|289777623|gb|GG745508.1| GENE 36 39278 - 39700 445 140 aa, chain - ## HITS:1 COG:yphA KEGG:ns NR:ns ## COG: yphA COG2259 # Protein_GI_number: 16130468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 140 25 164 164 216 88.0 7e-57 MNTLRYFDFGASRSLLLLIARIAVVVLFILFGYPKLLGFGGTVQYMAASGAPMPTLAAII AVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSI AGAFLLLAITGPGAISLDRR >gi|289777623|gb|GG745508.1| GENE 37 40001 - 41137 1371 378 aa, chain + ## HITS:1 COG:STM2554 KEGG:ns NR:ns ## COG: STM2554 COG0477 # Protein_GI_number: 16765874 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 378 1 378 379 567 87.0 1e-161 MVLHSTRWLALSYFTYFFSYGIFLPFWSVWLAGNGLTPETIGLLLGAGLVARFLGSLLIA PRVSDPSRLIAALRVLALLTLLFALAFWVGSHVAWLLAVIIGFNLFFSPLVPLTDALANT WQKQITMDYGRVRLWGSIAFVIGSALTGKLVSLFDYRAILLMLSLGVASMLLGMLLKPSV MPHGESRQQQGAGLTAWLTLVRQSWRFLACVCLLQGAHAAYYGFSAIYWQQAGYSASAVG YLWSLGVVAEVVIFALSKKVFRRFSARDLLLLSAVCGLIRWGLMGWTTALPGLLLAQILH CGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQHLHQGVFWV MALLTIPALIIRPKAVAA >gi|289777623|gb|GG745508.1| GENE 38 41134 - 42345 1145 403 aa, chain - ## HITS:1 COG:STM2553 KEGG:ns NR:ns ## COG: STM2553 COG3711 # Protein_GI_number: 16765873 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 2 402 24 424 425 483 62.0 1e-136 MFYLPGQSVTTERLGRINLVDETTARQDIEETGREIQRYHRLTLRSEVDGSYRIEGAALD QRLCLLHALRRGLRLCPQFVNHHFTPALKTQLKQEGIARTLYDDTNLQALVNRCARALNR QFDCRDVQFLRLYLQYCLLEHHRGYSPDFNDEQQRWAQTAAEFTLAQEIVRHWQRRVGAP PHVGEPFFLSLLFMLLKTPDPVRDGHPHDRRLRLAISGLIHRFQVLAGRAFSDEQGLSDQ LYIHLSQALIRSVFAIGIDSTLTEEVSRLYPRLLRTTQAALSEFEEAWHIRFNEEETGLI AVIFGAWLMQKSDLHEKQVLLLTDDNPAIEEALEQQLRELTLLPLNIKYQSVERFQKEGA PKGVTLIVTPYATALPLFSPPLIHAENCFTERQQQHICAMLED >gi|289777623|gb|GG745508.1| GENE 39 42638 - 43174 728 178 aa, chain + ## HITS:1 COG:STM2552 KEGG:ns NR:ns ## COG: STM2552 COG3683 # Protein_GI_number: 16765872 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 9 178 43 212 212 256 70.0 2e-68 MVKDGLLSGFKMRWTMDEITSSDLLYDAGNAKPGSEVWKKLAAEVMANVLGQHYFSELWH NGQRVKFENRPDGYGLERDGLQAVLTFTLPLATPQPVAGQTFTFSTFDPTYYVDMFYDKD SDFSLPAALRAACKATVMTPKPNDKMLSYAQSLDKADAPPEDMALGSYFAQKVTLTCQ >gi|289777623|gb|GG745508.1| GENE 40 43165 - 44145 1082 326 aa, chain + ## HITS:1 COG:STM2551 KEGG:ns NR:ns ## COG: STM2551 COG2215 # Protein_GI_number: 16765871 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 326 1 326 328 405 73.0 1e-113 MSVIFTPRARSSRWKALWPLALLLAVSIIGGIWLWRAWPQVLMQSAVWQRSLNLELSRLL QAVAENPAAAGLPLLGFSFVYGVVHALGPGHGKIVITTWLATHPSKLKSSINLTLAASLL QGLVAIALVVVVLALLQLPARQLHLSSFWLEKGSYLLVGALGLLLCWRALKKLRLLLSRP TFTAFTPHHVHHEHCGCGHQHLPAPDQLQSGDDWRARAAIVLSMGMRPCSGAIMVLLFSK VIGVFSWGMAAALAMAAGTSLTITALALLVHSFRQLAVKLGQHQAPPLWRQVGWLTLALA GGVILLAAAGVMWFTAVPAGGGIRPF >gi|289777623|gb|GG745508.1| GENE 41 44245 - 45081 566 278 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1193 NR:ns ## KEGG: Kvar_1193 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 278 1 278 278 480 99.0 1e-134 MAANIVSSAPSGRFYYGCAGAAGLLAGLAIVYWFPALASWWPSDLVRVYHAMSYVMGFGV SRIGDIPLVAYATLTLSGFVMAFCHPGHSKLPIVAWAVHNQPSPREMVDWILRSWVLQFG FLVIIFWRFAFMGKLTSYRLMQFVGIFNDVCYLATLVLAGILLRDSWRDFQGVSAPSSNI RIPLIFALSFYLPFQLVWILLSAQQFELPLWGWLLLVPAMVGVLLARLATVGIALCFRRW LGPQGCLRWRGPLALFSGLTVLCIGGNAVIRQILNMIK >gi|289777623|gb|GG745508.1| GENE 42 45128 - 45931 1161 267 aa, chain - ## HITS:1 COG:STM2546 KEGG:ns NR:ns ## COG: STM2546 COG0483 # Protein_GI_number: 16765866 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 491 88.0 1e-139 MHPMLNIAVRAARKAGNLIAKHYETPDTVETSQKGSNDFVTNVDKAAEAIIIETIRKSYP QHTIITEESGEHAGEEQDVQWVIDPLDGTTNFVKRLPHFSVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRGSNARDLDGTIIATGFPFKAKQHATTYMNILGNMFTECA DFRRTGSAALDLAYVAAGRVDGYFEIALKPWDFAAGELIAREAGAIVCDFTGGHNYLLTG NIVAGNPRVVKAMLANMREQLSDALKR >gi|289777623|gb|GG745508.1| GENE 43 46052 - 46786 975 244 aa, chain + ## HITS:1 COG:STM2545 KEGG:ns NR:ns ## COG: STM2545 COG0565 # Protein_GI_number: 16765865 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Salmonella typhimurium LT2 # 1 244 1 243 243 453 94.0 1e-127 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA QIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEGQHAPVALVFGRERVGL TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEQAQPAVDHEEAPYPL VDDLERFYGHLEQTLLATGFIRPNHPGQVMNKLRRLFTRARPESQELNILRGMLASIEQQ NKGK >gi|289777623|gb|GG745508.1| GENE 44 47039 - 47530 499 163 aa, chain + ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 163 1 162 162 259 93.0 2e-69 MRLTSKGRYAVTAMLDVALNSETGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSERLTGF LNNITLGELVNNQEILDVSGRQHQHETQRNARTQDAINVKLRA >gi|289777623|gb|GG745508.1| GENE 45 47710 - 48924 1626 404 aa, chain + ## HITS:1 COG:STM2543 KEGG:ns NR:ns ## COG: STM2543 COG1104 # Protein_GI_number: 16765863 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 803 97.0 0 MKLPIYLDYSATTPVDPRVAEKMMQFLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIAE LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIATIGEMCRARGIIYHVD ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRIRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMESEMARLRTLRNRLWNGVKDMEEVYLNGDLEQGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMTDELAHSSIRFSLGRF TTEEEIDYTIKLVRNSIGRLRDLSPLWEMFKQGVDLNSIEWSHH >gi|289777623|gb|GG745508.1| GENE 46 48951 - 49337 584 128 aa, chain + ## HITS:1 COG:STM2542 KEGG:ns NR:ns ## COG: STM2542 COG0822 # Protein_GI_number: 16765862 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 233 97.0 6e-62 MAYSEKVIDHYENPRNVGSFDNSDENVGSGMVGAPACGDVMKLQIKVNNEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIADELELPPVKIHCSILAEDAIKAAIAD YKSKREAK >gi|289777623|gb|GG745508.1| GENE 47 49355 - 49678 561 107 aa, chain + ## HITS:1 COG:STM2541 KEGG:ns NR:ns ## COG: STM2541 COG0316 # Protein_GI_number: 16765861 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 196 95.0 1e-50 MSITLSDSAAARVNAFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPAAEDTVFEDKGV KVVIDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFNV >gi|289777623|gb|GG745508.1| GENE 48 49732 - 50268 469 178 aa, chain + ## HITS:1 COG:ECs3393 KEGG:ns NR:ns ## COG: ECs3393 COG1076 # Protein_GI_number: 15832647 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Escherichia coli O157:H7 # 8 178 1 171 171 247 85.0 8e-66 MHDPEVTMDYFTLFGLPASYTLSLEQLAVRYQDLQRQYHPDKFASAPAAEQLAAVQHSAT INQAWQTLRHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIGKAKDDAR LEAFIKRVKALFDTRHQLMVDQLHNESWEAAADTVRKLRFLDKLRSSAEELEEKLLDF >gi|289777623|gb|GG745508.1| GENE 49 50284 - 52134 2451 616 aa, chain + ## HITS:1 COG:STM2539 KEGG:ns NR:ns ## COG: STM2539 COG0443 # Protein_GI_number: 16765859 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Salmonella typhimurium LT2 # 1 616 1 616 616 1002 90.0 0 MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLPDHQGRYLLPSVVNYH ASGLTVGYDARLNAAQDPANTISSVKRMMGRSLADIQNRYPHLPYQLQASENGLPMIQTA GGLLNPIRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADYLREQAGFSDRSDNRLQRELLDAAIAAKIALSDAEAVHVEVGGWQGDITRSQF NDLIAPLVKRTLLACRRALKDAGVEAQEVLEVVMVGGSTRVPLVRERVGEFFGRTPLTSI DPDKVVAIGAAIQADILVGNKPDSELLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QEFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGL LSVTAMEKSTGVEASIQVKPSYGLTDGEIATMIKDSMSYAEQDVQARMLAEQKVEAARVL ESLTSALAADAALLSAAERQAIDAAAEQVRAAAAGDDADAIKEAIKNIDTQTQEFAARRM DQSVRIALKGQSVDEV >gi|289777623|gb|GG745508.1| GENE 50 52136 - 52471 455 111 aa, chain + ## HITS:1 COG:ECs3391 KEGG:ns NR:ns ## COG: ECs3391 COG0633 # Protein_GI_number: 15832645 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 192 90.0 2e-49 MPKIVFLPHQDLCPDGIVVEAETGETILDAALRSGIEIEHACEKSCACTTCHCIVREGFD SLAESTEDEDDMLDKAWGLEPDSRLSCQARVTDEDLVVEIPRYTINHAREH >gi|289777623|gb|GG745508.1| GENE 51 52473 - 52673 403 66 aa, chain + ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 110 95.0 9e-25 MALKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEEFDDDPNASNEKILEAILLV WLDEAE >gi|289777623|gb|GG745508.1| GENE 52 52781 - 54067 1761 428 aa, chain + ## HITS:1 COG:STM2536 KEGG:ns NR:ns ## COG: STM2536 COG0260 # Protein_GI_number: 16765856 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 785 90.0 0 MTEAMKITLSTQPADARWGEKASYSINNDGIALHLNGKDDLGLIQRAARKIDGMGIKHVA LSGEGWDTDRAWAFWAGYKGPKGTRKVEWPTLDDAQRSELDNRLTIIDWVRDTINAPAEE LGPEQLAQRAVDLLCSVAGEQMSYRITKGEDLREQGYLGLHTVGRGSERPPVLLALDYNP TGDKEAPVYACLVGKGITFDSGGYSIKQSAFMDSMKSDMGGAATITGALAFAITRGLNKR VKLYLCCADNLISGNAFKLGDIIHYRNGKTVEVMNTDAEGRLVLADGLIDASAQKPALII DAATLTGAAKTALGNDYHALFSFDDALANRLLASAQAENEAFWRLPLAEFHRNQLPSNFA ELNNTGSAAYPAGASTAAGFLSHFVENYHQGWLHIDCSATYRKSAVEQWSAGATGLGVRT IANLLTAE >gi|289777623|gb|GG745508.1| GENE 53 54165 - 54941 1112 258 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1205 NR:ns ## KEGG: Kvar_1205 # Name: not_defined # Def: SseB family protein # Organism: K.variicola # Pathway: not_defined # 1 258 1 258 258 488 100.0 1e-137 MSDTKNELETLLEKAATEPAHRPAFFSALLEATVWVPGSAADGEQIVEDSALDLQHWEKD DGSSVIPFFTSLEALQQAVEDEQAFVMMPARTLMAMTLGESLFLNPKLPSGKEFTPREIS HLLGEEGSPLSTQTVLEGGEALLLSEVADPPAQMVDSLTTLFKTLKTVKRAFLCSIKEHA DAPANLLIGIEAEGDIESIIQTTGSVATDTLPGDEPIDICQVVEGEKGISHFMIAHITPF YEKRWGSFLRDFKQNRII >gi|289777623|gb|GG745508.1| GENE 54 55012 - 55854 373 280 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1206 NR:ns ## KEGG: Kvar_1206 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 280 1 280 280 479 100.0 1e-134 MALVSNPHSADSPRRPWLGGIAGLLAGGVILYFWPQWNRTWLSLVPVPVSVYTRFLGVTL EEVPLITYGHQALLGFLMVLLAPGYGKSTLAAWMMHNPASSRRWPGEVLRAWGIKFGLLI IVFCNLFFLSRVGSGTLALYIFILQHVSVAAAVASGVLLLRDARRLARTFDAQLADLRLL VILTLGFQTILPAQIALMSARGVNTPLGWYIVIAQMAGVLLAFMLVGGLVAALRSLLGEE RCRAWRGDMALFNGIVTLCVTGFLIYNMASAYPRIFAALH >gi|289777623|gb|GG745508.1| GENE 55 55957 - 56607 766 216 aa, chain - ## HITS:1 COG:no KEGG:KPN_02852 NR:ns ## KEGG: KPN_02852 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 216 1 216 216 416 99.0 1e-115 MAFSLPDLMDVVHKYNRNPTPKPMPVDEVDRLRVRKYRDPQNSETVALPESLKALLAYDC QLKSPHGQLVLEWVVDSIDEHGVLLSDSLDEDAYYMNGLDMAGLDFEELMPVWNDDPRLP ALIRISHAGDQQVFIYVTERDEQGEYPVVRFEGKENDLWLAESSLIEYLQGIFAGSEESH DEWQHQQTLNEARDGALLELEYIHEDLYARLEGCPD >gi|289777623|gb|GG745508.1| GENE 56 56772 - 57629 1008 285 aa, chain - ## HITS:1 COG:ECs3387 KEGG:ns NR:ns ## COG: ECs3387 COG2897 # Protein_GI_number: 15832641 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 280 54 332 334 432 74.0 1e-121 MSTSFFVAADWLAEHIDDPEIQIIDARMAPAGQEALRDMAAEYRAGHVPNALFFDIEALS DHTSPLPHMMPRAEAFAVAMRELGVCSDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSIL AGGLEGWRRDELPLEQGVPEVAEGEFDVRFDPQQIKRLTDVLLVSHEGSAQIVDARPAAR FNGQADEPRPGLRRGHIPGALNVPWTELVINGELKTVDELNDIFLRQGVDFERPIIASCG SGVTAAVVVLALTALGVNGVCLYDGSWSEWGARSDLPIEPASAAP >gi|289777623|gb|GG745508.1| GENE 57 57836 - 62785 6311 1649 aa, chain + ## HITS:1 COG:ECs3386 KEGG:ns NR:ns ## COG: ECs3386 COG2373 # Protein_GI_number: 15832640 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1649 1 1653 1653 2531 77.0 0 MKPFRLAALSLALLTAFSLTGCDDSGTPQATAPAPAADSTPGATAKPDRAQLAALAEKSQ GKALTLLDASEVQLDGAATLVLTFSVPLQPDQDFSRSVHLVDKKSGKVDGAWELAPNLKE LRLRHLEPKRELIVSVDPTLTALNKATLDKPFEKTLTTRDIAPSVGFASRGSLLPGNVVA GLPVMALNVDNVDVNFFRIKPESLSAFVSQWEYRNSLSNWESDELLKMADLVYSGRFDLN PARNTREKLLLPLNDIKPLQQPGVYVAVMNPAGHYSYSNAATLFTLSDIGVSAHRYHNRL DVFTQSLENGAAQPGIDVQLLNTKGQTLAQAKSDSQGHVTLQTDKEAALLLARKEGQTTL LDLKLPALDLAEFSIAGAPGFSKQFFMFGPRDLYRPGETVILNALLRDSDGKPLAEQPVK LEVVQPDGQVIRSVMSKPVNGLYQFTYPLDSGAATGMWHIRASTGDNQPREWDFHVEDFM PERMTLNLTPQAAPVAPDADVTFGVSGAYLYGAPASGNQLQGKLFLRPLRDAVAALPGFQ FGDIAEENLSRSLDEVQLTLDEKGHGEVTTSSQWQDSHSPLQVVLQASLLESGGRPVTRT VQQPIWPAGALPGIRPQFTLKDVYDYRTDTTVKQPVVDENSNAAFDIVYADAKGEKKAVS GLQVRLIRERRDYYWNWSDSEGWQSQFDQKDLQEGEESLDLQAGQTGKVSFPVEWGSYRL EVKGPDDVVSSVRFWAGYSWQDNSEGTGAARPDRVTMKLDKPSYKPGDTIKLHIAAPAAG KGYAMVESSEGPLWWQEIDVPAEGMDLSIPVDKAWNRHDLYLSTLVVRPGDKSRSATPKR AVGLLHLPLGDENRRLTLALEAPDKMRPNQPLTVKVKASVKEGESPKQVNVLLSAVDSGV LNITDYATPDPWNAFFGQKRYGADIYDIYGQVIEGQGRVASLRFGGDGDELKRGGKPPVN HVTIVAQQAQPVVLNDQGEGTVTLPIGDFNGELRVMAQAWTADDFGSSEDKVVVAAPVIA ELNTPRFLASGDTTRLALDLSNLTDKPQTLQVHLTASGLVTLSESQLPPVQLAPGARSTL FIPVSALAGFGDGQVNATISGLSLPGETFAPLQKQWRIGVRPAFPAQTVNSGAVLQPGES WQAPAAQSQGFAPQTLQGQLLLSGKPPLNLARYIRELKAYPYGCLEQTASGLFPSLYTSA AQLKALGISGDSDEKRRAAIDVGISRLLQMQLENGGFALWDKEGPEEYWLTAYAMDFLVR AGEQGYSVPVNAINKGNERLLRYLQEPGLMTVRYSDDAQASRFAAQAYAALVLARQQKAP LGALREIWSRHDQARSGLPLLQLGIALKTMGDAPRGDEAMKLAVATPRQDENRWLGDYGS PLRDDALKLALLEENRLLPEVQNTLLSTLSEEAYGQRWLSTQETNALFLAGRTLADLPGN WQAQTSLQAEPLAGDKAQTRNLDGDRLATLQVSNTGSQPLWLRLDSSGYPQSAPQPGGNV LGIERTIFDTQGQQKSLTSLRSGELVLVKLEVTAKRNVPDALVVDLLPAGLELENQNLAN SSASLQENGDAVQNLLNQMQQADIQHIEFRDDRFVAAVAVNEGQPVTLVYLARAVTPGTY QVPQPQVESMYVPQWRATGAASGPLTVTP >gi|289777623|gb|GG745508.1| GENE 58 62786 - 65110 1847 774 aa, chain + ## HITS:1 COG:pbpC KEGG:ns NR:ns ## COG: pbpC COG4953 # Protein_GI_number: 16130444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli K12 # 11 774 11 770 770 1129 75.0 0 MRVLPRVKRRWRWLAAFIFLLWLAVLVADRLWPLPLQDVAPARVVVAEDGTPLWRFADTQ GVWRYPVTLADVSPRYLQALIQYEDRWFWKHPGVNPFAVLRAAWQDLTSGRVISGGSTLT MQVARLLDPHPRTFGGKLRQLWRALQLEWHLSKNDILTLYLNRAPFGGTLQGIGAASWAY LGKPPTQLSYGEAALLAVLPQAPSRLRPDRWPQRAQAARDKVLTRMVSQGVWPQRPVQEA IEEPVWLFPRQMPQLAPLFSRRALATSRDEKVTTMLDAGLQRQLEDLALNWKSRLTPRSS LAIVVVDHTDMKVRGWVGSADITDDSRFGHIDMVSAVRSPGSVLKPFVYAMAMDDGLIHP ASLLQDVPRRFSDYRPGNFDSGFHGPVSASEALVRSLNLPAVQVLEAYGPKRFAANLRNA GLPLTLPAGAEPNLSLILGGAGARLEDIVAAYSAFARHGKAARLRLKPDDPLVERSLMSP GAAWIVRRILAGEAQPVPDASLPQVVPLAWKTGTSYGYRDAWAVGLNARYLIGIWTGRPD GTPVVGQFGFASAVPLLNQVNNLLLARQAMSRGGLPVDPRPQTVSRGAICWPGGQDLPAG DSNCRRRLASWLLDASQPPTLLLPGQEGVRGIRFPVWRNAAGERVAADCPGATEVVIDVW PLPLEPWLPARERRRARLGPVSKVCPPLQTQNAAPLVLSGIREGALIKRLPGEARVMLPV QTSGGEGRRWWFINGQPLDAAGATTTLTLDKPGEWQLVVMDEAGQTAAASFTLQ >gi|289777623|gb|GG745508.1| GENE 59 65271 - 65702 478 143 aa, chain + ## HITS:1 COG:ECs3380 KEGG:ns NR:ns ## COG: ECs3380 COG0105 # Protein_GI_number: 15832634 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 264 94.0 4e-71 MAIERTFSIIKPNAVAKNVIGSIFSRFEAAGFKIVGTKMLHLTVEQARGFYAEHEGRPFF DGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPSNALAGTLRADYADSFTENGTHGSD SVESAAREIAFFFAEGEVCPRTR >gi|289777623|gb|GG745508.1| GENE 60 66118 - 67284 1608 388 aa, chain + ## HITS:1 COG:STM2525 KEGG:ns NR:ns ## COG: STM2525 COG0820 # Protein_GI_number: 16765845 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 752 92.0 0 MSEQIVTPDTAALTVPNKDAKINLLDLNRQQMREFFKNMGEKPFRADQVMKWMYHYCCDD FDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSTDGTIKWAIAVGDQRVETVYIPEEDRAT LCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAVKTTGVRPITNVVMM GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHA PNDTIRDEIVPINKKYNIETFLNSVRGYISKSNANQGRVTIEYVMLDHVNDGTEHAHELA ALLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMEYGFTTIVRKTRGDDIDAACG QLAGDVIDRTKRTLRKRMQGEAIDVKAV >gi|289777623|gb|GG745508.1| GENE 61 67561 - 68553 780 330 aa, chain + ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 330 1 337 337 438 78.0 1e-123 MNTEATQDHQEANTTGARLRHAREQLGLSQQAVAERLCLKVSTVRDIEDDKAPADLASTF LRGYIRSYARLVHIPEEELLPMMAKQAPIRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLV LFVVIGLSGAWWWQDHKAQQEEISTMADQSSAELNGGDANSQNVPLDTSAPVDSGTDSAA NSAPTDTASTPTTSAPAQTPADNNAVVAPSQANVDTAGTAPTTPATPASPLPTDQANVTT PAASAQDLVMNFSADCWLEVSDATGKKLFSGLQRKGGNLNLSGQAPYKLKIGAPAAVQIQ FLGKPVDLSRFIRTNQVARLTLNAEQSPAQ >gi|289777623|gb|GG745508.1| GENE 62 68580 - 69701 1487 373 aa, chain + ## HITS:1 COG:ECs3377 KEGG:ns NR:ns ## COG: ECs3377 COG0821 # Protein_GI_number: 15832631 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Escherichia coli O157:H7 # 1 371 1 371 372 694 97.0 0 MHNQAPIQRRKSKRIYVGNVPIGDGAPIAVQSMTNTRTTDVAATVSQIKALERVGADIVR VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRT VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL AADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNDDMIDQLEARIRAKASMLD EARRIDVQQLEAK >gi|289777623|gb|GG745508.1| GENE 63 69793 - 71067 1657 424 aa, chain + ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 795 90.0 0 MAKNIQAIRGMNDYLPGETALWQRIEGSLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVT DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYVGPMFRHERPQKG RYRQFHQIGAEVFGLQGPDIDAELIMLTARWWRELGIADHVSLELNSIGSLEARANYRDA LVAYLEQFTDKLDEDSKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDEESKTHFAGL CALLDDAGIRYTVNQRLVRGLDYYNRTVFEWVTTSLGSQGTVCAGGRYDGLVEQLGGRAT PGVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGTDTQSAAMRLAEQVRDALPGVKL MTNHGGGNFKKQFARADKWGARIALVVGESEIADGNVVVKDLRSGEQTTVTQESVAAHLR TLLG >gi|289777623|gb|GG745508.1| GENE 64 71102 - 71722 731 206 aa, chain + ## HITS:1 COG:STM2521 KEGG:ns NR:ns ## COG: STM2521 COG2976 # Protein_GI_number: 16765841 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 206 1 206 206 281 76.0 9e-76 METFNNENDQVDALKRFFAENGKALAVGVILGIGALVGWRYWTSHQQDTARDASLAYEQA TSALKSNTPEVLSGAEKFAADNKNTYGAFASLELAQHFVEQNDLPNAEKQLQQGLAAASD DNLKSVISMRLARVQLQMKQADAALKTLDSIKGEGWTAIVADLRGEILLSKGDKQGARAA WEAGVKSDASPALSEMMRMKMNNLSI >gi|289777623|gb|GG745508.1| GENE 65 71733 - 72911 1231 392 aa, chain + ## HITS:1 COG:ECs3374 KEGG:ns NR:ns ## COG: ECs3374 COG1520 # Protein_GI_number: 15832628 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Escherichia coli O157:H7 # 13 392 13 392 392 668 89.0 0 MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPSTSWSTSVGDGIGEFY SNLHPAFADGVVYAADRKGTVKALNADDGKEVWSVNLAEKDGWFSRVPALLSGGVTVSGG HVYIGSEKAQLYALNTSDGTVAWQTRVAGEALSRPVVSDGMVLVHTSNGQLQALNETDGA VKWTVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTE IDRLNDVDTTPIIVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD QNDRLLALTTDGGVTLWTQSDLLHRLLTAPVLYNGNLVVGDSEGYMHWVNPEDGHFVAQQ KVDSSGFLTDPVVADGRLLIQAKDGTLYAITR >gi|289777623|gb|GG745508.1| GENE 66 73025 - 74503 2007 492 aa, chain + ## HITS:1 COG:STM2519 KEGG:ns NR:ns ## COG: STM2519 COG1160 # Protein_GI_number: 16765839 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 492 1 490 490 917 93.0 0 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI DGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSREKPTFLVANKT DGIDVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEISPQEEVDEDAEYWA KFEAEQNGEAEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTR DSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVLLVIDAREGI SDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDYRLGFIDFARVHFISALHG SGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAEDHQPPLVRGRRVKLKYAHAGGYNPP IVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRIQFKEGENPFANKRNTLTPNQMRK RKRLIKHIKKSK >gi|289777623|gb|GG745508.1| GENE 67 74621 - 75700 702 359 aa, chain + ## HITS:1 COG:no KEGG:KPK_1280 NR:ns ## KEGG: KPK_1280 # Name: not_defined # Def: oxidoreductase, NAD-binding # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 359 1 359 359 682 98.0 0 MQIGFIGLGAVVETAYLPALRRLGNVIDRCHGYDLDSSRALPGIQRCNSLSALLAEPLDT LFITTSSLQHLPVLERALASGISRIVVEKPIVANLEQAARLRALLAPPEQAARVLALDHW MARGVALNAPGPRWRAEGEASRQPPPHLSAQDIVWLEGYLQEPSGFNAAGEPVALNFATG ELDTRQLRHPDGVILDIGTHVLAMLRETLHASGSDTALSLSLRVAKDRLGHGIAPGDTVT AEGEAHLQGTLGTIPLNIWLNKYAGPAGGQKGMRIGLRDGRILILDRSPEGEVVTLHDGE RIQRWTRPGTIYSHCLDEQILGADNLFIRAPDSVAGLTRRRLEEVEWLLRLQQQLRGPH >gi|289777623|gb|GG745508.1| GENE 68 75750 - 75968 152 72 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1219 NR:ns ## KEGG: Kvar_1219 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 72 1 72 72 125 100.0 5e-28 MELDCPLCHAPLDVKGSSAHCAQCERVFALEARCPECHQPLEVLKACGAVDYFCQHGHGL ISKKRVEFIPLV >gi|289777623|gb|GG745508.1| GENE 69 75952 - 77343 1252 463 aa, chain - ## HITS:1 COG:STM2512 KEGG:ns NR:ns ## COG: STM2512 COG1570 # Protein_GI_number: 16765832 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Salmonella typhimurium LT2 # 1 447 1 447 449 719 86.0 0 MLPSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNFSQPSSGHWYFTLKDDNAQVRC AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQ LTAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDD APGQIVRAIALANARQECDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSAVGHET DVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRRFTQLF HRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLDHYNPQPRIHRA QSRIQQLEYRLAENMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQT KQVKTGDLLTTRLKDGWVESEVKQIAPVKKTRARKPSPAKPAE >gi|289777623|gb|GG745508.1| GENE 70 77502 - 78968 1921 488 aa, chain + ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 475 93.0 1e-134 MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAG YPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGESREVVFAKMHEKRV EKALVVDESFHLRGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIG PGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGAAAVMV GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR VAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDLLRTKAEFVRISGAGIQESHVHDVTITKE SPNYRLGS >gi|289777623|gb|GG745508.1| GENE 71 79036 - 80613 2502 525 aa, chain + ## HITS:1 COG:STM2510_2 KEGG:ns NR:ns ## COG: STM2510_2 COG0519 # Protein_GI_number: 16765830 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Salmonella typhimurium LT2 # 207 525 1 319 319 639 96.0 0 MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIREFNPSGIILSGGP ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEGSNEREFGYAQVEVVNDSA LVRGIEDSLTADGKPLLDVWMSHGDKVTAIPSDFVTVASTDNCPFAIMANEEKRFYGVQF HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVERIRQQVGDDKVILGLSGGVDS SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAQQVMDMFGDHFGLNIVHVEGEQRFLDALKG ENDPEAKRKIIGRVFVEVFDEEALKLDDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKMGLVEPLRELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELHKADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|289777623|gb|GG745508.1| GENE 72 80945 - 81103 109 52 aa, chain + ## HITS:1 COG:no KEGG:Psyr_3499 NR:ns ## KEGG: Psyr_3499 # Name: not_defined # Def: helix-turn-helix, AraC type # Organism: P.syringae_B728a # Pathway: not_defined # 3 49 243 289 289 65 68.0 5e-10 MPEAKGNLIYTSLTVGQVADSLGVVEQAYFSRFFKRTTDLTLKAFRLQRREI >gi|289777623|gb|GG745508.1| GENE 73 81100 - 82008 579 302 aa, chain - ## HITS:1 COG:SPy0852 KEGG:ns NR:ns ## COG: SPy0852 COG1893 # Protein_GI_number: 15674885 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 302 1 302 307 178 33.0 1e-44 MKIAIVGAGAMGGLFGARLALAGQDVSFVEASETTIEVISRQGLRLETPDVQESVWVPIS RAHQVTGHFDLLVIFTKGFHTAAAIESVRHLVGPQTWALSVQNGLGNAELIARVVPAERI IVGMTNLPADLVAPGVVHSHGEGHINIWAGNGKDSPTVHEIAANFSQAGLPCEADPQVQV SIWEKVAFNAALNSVCAVTRRTVGAIGHAEEGRQVTSRIVSETVAVAQAAGVDADQRRVI AAVDYAFRHHQQHKPSMLQDVEAGRKTEIDFINGAVVERGKRLGVATPVLEMLFSLVKLS EG >gi|289777623|gb|GG745508.1| GENE 74 82398 - 83876 1221 492 aa, chain - ## HITS:1 COG:PA4899 KEGG:ns NR:ns ## COG: PA4899 COG1012 # Protein_GI_number: 15600092 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 9 492 6 489 489 734 75.0 0 MSQVNHTPYRDLHLLPIAGAWREGSAPQSLQVSDPYNGETLLQIKQATRDDLDEAYQAAQ RAQVEWAMIGPGQRSAILHRAVQIFDERREEIIGWIIRESGSTRIKAQIEWGAARSITLE SASFPARVHGRILPSNVPGKENRVYREPLGVVGVISPWNFPLHLTQRSVAPALALGNAVV IKPASDTPVTGGLLAARIFEEAGVPAGVISVLVGSGAEIGDAFVEHPVPKFISFTGSTPV GANIGRIASGGKHLKHVALELGGNSPFVVLADADLEQAVAAAVMGKFLHQGQICMAINRI IVEDALYDRFVERYAERVKALKVGDPSEPDTVVGPIINRKQLDTLLSKVARAREEGARPV VEGDVRGQLLPPHVFADVTAEMEITREEIFGPLVGIQRARDEAHALALANDSEFGLSSAV FTADLERGARFARRIKAGMTHVNDIPVNDEAHAPFGGEKNSGLGRFNGEWAIEEFTTDHW ISVQMTPRKYPF >gi|289777623|gb|GG745508.1| GENE 75 83911 - 85245 1144 444 aa, chain - ## HITS:1 COG:PA4900 KEGG:ns NR:ns ## COG: PA4900 COG0477 # Protein_GI_number: 15600093 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 1 428 1 429 446 379 51.0 1e-105 MTQRRALDVAGSAPLGKLHYTLLFWCSFIMLFDGYDLVIYGSVVPQLMEHWALTPVIAGW MGSAALFGMMFGAVVIGPLADRLGRRKVILSAMTLASVCTLGTAWAWDAESFATLRFVTG VGLGGAIPNIVALMNDLTPKARRSRMTTIMLSFYSIGAIFSALVAMFIIPRFGWEATFLV GGIPLLFLPWMYRQLPESLNFLLKKDKAAASALLKRIDPAVNADQVRFDAPVRTSSEAPL SRLFTEGRGVGTVFLWLGFGMCMLMVYGLNTWLPKIMVAGGFPLGSSLMFLVTLNIGATF GALGGGWLADRWGCKPTLILFFLLAVISLCTLGIKPGPLLLNAMLLIAGATTIGTLAVIH AFAAQQYPSEIRATGVSWCSAIGRFGAVAGPAMGGLMLSINLPLQLNFILCAVPGLVAIF AIAMIKRRDVASVGLNAQPADTHH >gi|289777623|gb|GG745508.1| GENE 76 85316 - 86905 1373 529 aa, chain - ## HITS:1 COG:PA4901 KEGG:ns NR:ns ## COG: PA4901 COG0028 # Protein_GI_number: 15600094 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Pseudomonas aeruginosa # 1 528 1 528 528 760 74.0 0 MKTIHSAAYALLRRHGMTTIFGNPGSNELPFLKSFPEDFQYVLGLHEGAVVGMADGYALA SGKPAFVNLHAAAGTGNGMGALTNSWYSHSPLVITAGQQVRPMIGVEAMLANVDATQLPK PLVKWSYEPANAQDVPRALSQAIHYANTTPKAPVYLSIPYDDWDQPSGPGVEHLIERDVQ TAGTPDARQLQVLVQQVQDARNPVLVLGPDVDATLSNDHAVALADKLRMPVWIAPSASRC PFPTRHPSFRGVLPAAIAGISKTLQGHDLIIVVGAPVFRYHQFAPGDYLPVGAQLLHITS DPLEATRAPMGHALVGDIRETLRVLAEEVVQQSRPYPEALAAPECVTDEPHHLHPETLFD VLDAVAPHDAIYVKESTSTTTAFWQRMNLRHPGSYYFPAAGGLGFGLPAAVGVQLAQPQR RVVALIGDGSANYGITALWTAAQYRIPVVFIILKNGTYGALRWFAGVLKAEDSPGLDVPG LDFCAIAKGYGVKAVHTDTRDSFEAALRTALDANEPTVIEVPTLTIQPH >gi|289777623|gb|GG745508.1| GENE 77 87025 - 87930 217 301 aa, chain + ## HITS:1 COG:PA4902 KEGG:ns NR:ns ## COG: PA4902 COG0583 # Protein_GI_number: 15600095 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 298 1 293 298 340 56.0 2e-93 MAGFDLNLITTFVTLYETQSVTVAAERLCVTQPSVSYALAKLREQFDDALFVRNQQGMQP TRLATQLYEGFKEASRSINDAVSEARKFSPSTSKRRFRLALSDLGEIALLPRVLERLNQM APSIELDIVPLEIDQVATWLNDGHIDAAICSQILPGAGITHQRLMSEQYCCLVDDAHPRI GTQMNMQQFLAEPHAIVTRTSGHGMVEDVLKKMAVERRVRLRIPHFSVLPKIIPGTEMIT ILPYRIAWSFCEFPGDKPLKVVDLPFEVPSFEVTLHWHSRSEKSTSLKWFCEQIEAALGE P >gi|289777623|gb|GG745508.1| GENE 78 88024 - 88248 151 74 aa, chain + ## HITS:1 COG:AGpA136 KEGG:ns NR:ns ## COG: AGpA136 COG3666 # Protein_GI_number: 16119322 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 68 11 69 234 73 55.0 8e-14 MGPPPGGRQRLFYSFNLEDHVPVQHLLRSIDQCLDLRDLLSYLADFYSSIGRSSIDPELM MRMLVIGYCYVGDR >gi|289777623|gb|GG745508.1| GENE 79 88862 - 90151 1085 429 aa, chain - ## HITS:1 COG:AGpA464 KEGG:ns NR:ns ## COG: AGpA464 COG0477 # Protein_GI_number: 16119550 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 367 5 376 417 125 30.0 2e-28 METRAIPRRLAFTAGGQQLINWGISFYMPGTFAGAIAADKGWSLPQIYLGLTLAMLMMAA VSPFVARLLARFGGRLVVTSGTLLIAASCAMMAWRPSLAGWYGAWLLTGIGMRLSLYDAL FAAVVNLYGQQARKTISHITLAGGLASALFWPLGEALLTIMPWQNALRIYALFGLLSAWL SYQLPRQRLSTSVKMIAPTTTAEGDRRNGVRYAIFIALITFISNGTSTHLPEFISHFGLP VAVGMLWGFGQTGARLGEVLAGPRVTPLTLTRFTALAMPLCFLLGLSSTAYAGFAAGFVL GYGAINGLVTIVKATLPLALFSAESYASRTGILLIPGQLMAAASPFAYAWLNHRLGIIGG MWVSTGLTLIVAGLALAMVRGAGTVQPGKLSALRTAAAKNGPAEHLPEPQTGNSQGNLTL PDNLLGRRD >gi|289777623|gb|GG745508.1| GENE 80 90249 - 91133 858 294 aa, chain + ## HITS:1 COG:AGc1597 KEGG:ns NR:ns ## COG: AGc1597 COG0583 # Protein_GI_number: 15888214 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 294 22 314 316 212 43.0 5e-55 MTTLNLGNLATFRLVVQRGSFSAAADALGISQPAVSLQVRQLEQFLQTRLLERTGRGIKA TAAGMALLAHSEQIDRAVNSAMQSVSAFSQEVNGAVTLGTGATACIHLLPPLLQHLRQQH PLLTVGVTTGNTLDIVRAVEENRLDLGLVTLPVQGRSLAVTSVVDEEFVVIHASHETGTL ADYTPAELLALPLIAFEAGSGTRDLIDRWFRSAGVAVTPVMQLGSIEAIKRMVRAGLGYS IVPRMAVEQEKDRDGLSVHSLAPRLYRQLAVVMRQDKIVTKGIAEMLRLLHAVR >gi|289777623|gb|GG745508.1| GENE 81 91233 - 91406 230 57 aa, chain - ## HITS:1 COG:no KEGG:KPK_1301 NR:ns ## KEGG: KPK_1301 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 57 7 63 63 96 100.0 2e-19 MRKRHRFNRRMTRIVLLISFLFFFGRFVYSSIGAWYHHQDKKASQESSLTVEPSARE >gi|289777623|gb|GG745508.1| GENE 82 91885 - 94005 1910 706 aa, chain + ## HITS:1 COG:Z3766_3 KEGG:ns NR:ns ## COG: Z3766_3 COG2200 # Protein_GI_number: 15803026 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 440 697 1 258 272 365 66.0 1e-100 MLNGHMVFLYYLPLALVLSLMMFFGWAAIPGIIIGLLLTLARGMTPEQAIGVLFHFLIPC VLCWGGYRIFVPRRQQVSHGNVKLMPHRLFWQMLLPSVIFLILSQIAEYLGLHPRTTEMT GITPFSLRSLITFQALMVGCLTGVPLCYFLLRIIRNPFHVRGFISQVRLQIDPKIKTIEI ICWAAILILLLGLLLMPLNDTSTIFSTNYTLSLLMPVMLWGAMRFGYRFISLIWTPVLIA VIHFHYRYLPVYPSYNTQLAITSSSYLVFSFIVAYTAMLATQQRLIYARVRQMAFLDPVV HMPNLRALSRALNGTSWSTLCFLRIPELELLGRHYGVLLRIQYKQMLANHLSALLQPNEA VYHLAGHDLVFRLNSEGHQARIHLIDRSLRQFRFYWDGVPLQPRIGMSYCNVRSPVKHLY LLLGELNTIADMSLASGHPENMQRRGAGHVQQDLKDKVVMMNRILKALEQDHFVLMAQPI QGIRGDNYHEVLLRMEGESGELTGPNAFLPVAHEFGLSSRVDQWVIEHTLAFMDTHRRAL PGLRLAINLSPVTLSRSQFPQEVEALLQTYNIEPWQIIFELTENYALSNPELVCQTLEHL RALGCRVAIDDFGTGYASYARLKTMNVDILKIDGSFIRNLLASSLDYQVVDSICRLARMK NMQVVAEYVESPEIRQAVIALGIDYLQGYDIGVPVPLAQLAEGMTA >gi|289777623|gb|GG745508.1| GENE 83 94061 - 95521 1958 486 aa, chain - ## HITS:1 COG:STM2502 KEGG:ns NR:ns ## COG: STM2502 COG0248 # Protein_GI_number: 16765822 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Salmonella typhimurium LT2 # 1 482 25 506 513 829 86.0 0 MVIARVVDGAMQIIGRLKQRVHLADGLDENSVLSEEAMTRGLNCLSLFAERLQGFSPSSV CIVGTHTLRQATNAAEFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPERGRKLVIDI GGGSTELVIGEDFEPRLVESRRMGCVSFSQAYFPGGTINKENFQRARLAAVQKLETLAWQ FRIQGWTVALGASGTIKAAQEVLVAMGEKDGFITPERLEMLVSELLKHKNFDALSLPGLS EDRKAVFAPGLAILCGVFDALAIKELRLSDGALREGVLYEMEGRFRHQDIRSRTAQSLAN QYNIDREQARRVLETTTHMLEQWQEQNPKLANPHLAALLKWAVMLHEVGLNINHSGMHRH SAYILQNSDLPGFNQEQQMLMATLVRYHRKAIKLDDLPRFTLFRKKQFLPLIQLLRLGVL LNNQRQATTTPPTLRLQTEAHHWTLTFPHNWFSQNALVLLDLEKEQQYWEGVPEWLLKIA EEEPDA >gi|289777623|gb|GG745508.1| GENE 84 95597 - 97657 2717 686 aa, chain - ## HITS:1 COG:ECs3363 KEGG:ns NR:ns ## COG: ECs3363 COG0855 # Protein_GI_number: 15832617 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Escherichia coli O157:H7 # 1 686 1 688 688 1268 92.0 0 MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR IIISEEQGSTAHSRHLLGKIQARVLKADQEFDSLYNELLLEMARNQIFLINERQLSVNQQ AWLRNYFKQYLRQHISPILINRETDLVQFLKDDYTYLAVEIIRGENINYALLEIPSDKVP RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME SSLMELMSSSLKQRLTAEPVRFVYQRDMPDAMVEMLRDKLSISNYDSMLPGGRYHNFKDF IGFPNVGKANLVNKPMPRLRHLWFDKFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASF DPSVLAIKINIYRVAKDSRIIDAMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG VHVIFSAPGLKIHAKLFLISRKEGDEVVRYAHIGTGNFNEKTARIYTDYSLLTADARITN EVRRVFNFIENPYRPVSFDYLLVSPQNSRRLLYEMIDREIANAQNGQPSGITLKLNNLVD KGLVDRLYAASSSGVPVNLLIRGMCSLIPGLEGISDNIRVISIVDRFLEHDRVYCFENGG DKQVWLSSADWMTRNIDYRIEVAAPLLDPRLKQRVLDIFDILFNDTVKARYLDKELSNRY VPRGNRRKVRAQMAIYDYLKSLEQPD >gi|289777623|gb|GG745508.1| GENE 85 97838 - 98479 603 213 aa, chain - ## HITS:1 COG:purN KEGG:ns NR:ns ## COG: purN COG0299 # Protein_GI_number: 16130425 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Escherichia coli K12 # 3 213 2 212 212 358 82.0 4e-99 MKNIVVLISGSGSNLQAIIDACGRKQINGTLRAVFSNKADAFGLERARAAGIPAHALAQS QFADREAFDRQLMHEIDAYAPDLVVLAGYMRILSPAFVSHYQGRLLNIHPSLLPKYPGLH THRQVLENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDEVTARVQAQEHAIYPL VISWFVDGRLHMAGNHAWLDERQLPPQGYAAEE >gi|289777623|gb|GG745508.1| GENE 86 98476 - 99513 1245 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 334 7 338 356 484 71 1e-135 MTDKTSLSYKDAGVDIDAGNALVDRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVL VSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTAA SVINGIAEGCLQSGCALVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVADGDV LVALASSGPHSNGYSLVRKIIEVSGVDPQTTDLDGKPLADHLLAPTRIYVKSVLDLIASV DVHAIAHLTGGGFWENIPRVLPDNTQAIIDESSWQWPSVFNWLQTAGNVSQHEMYRTFNC GVGMVIALPAAEADKAIALLNEKGENAWKIGYIKASDSEQRVVIA >gi|289777623|gb|GG745508.1| GENE 87 99777 - 100670 277 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 4 283 6 311 323 111 27 1e-22 MKIAAFDIGGTALKMGVMTRDGRLLESAKQSINDSDGDHILQAMLSWLAAHPSCEGVAIS APGYVDPHSGFITMGGAIRRFDNFAMKAWLEARTGLPVSVENDANCVLLAERWQGKAAEM ANFLVLTIGTGIGGAIYCHHQLVHGARFRAGEFGYMLTDRPGGRDPRRYSMNENCTLRVL RHRYAEHIAAPLESVTGEMIFDRYDAGDPVCQRLVAEFFNGLGHGLYNLVNIFDPQAIFI GGGIVERPGFLALLRQHLAWFGIADYLDTVSHGNDAGLIGAVYHFNQHYRSPGDDRH >gi|289777623|gb|GG745508.1| GENE 88 100680 - 102113 1839 477 aa, chain + ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 476 1 477 478 772 76.0 0 MSGFKADFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGAHGVPREITDGVVAGKNYPNH EAIDFYHRYPEDLALFAEMGFKCFRTSIAWTRIFPQGDELEPNEAGLQFYDDLFDECLKH GIEPVITLSHFEMPYHLVTEYGGWRNRKLIDFFVRFARVVFTRYQHKVKYWMTFNEINNQ ANFHEDFAPFTNSGLKYLPDEDREPVMYQAAHYELVASALAVKAAREINPALQIGCMIAM CPIYPLTCAPDDMMMAMNAMHRRYWFTDVHVRGRYPQHLLNYFARRGFTLDITEADRQAL TEGCVDYIGFSYYMSFATKATEDNPLLDYDETTSLVSNPYVKKSDWGWQIDPVGLRYSLN WFWDHYQLPLFIVENGFGAIDVREADGSVNDQYRIDYLSAHIAEMKKAVVEDGVDLMGYT PWGCIDLVSAGTGEMKKRYGFIYVDKDNEGNGSLARSRKKSFAWYRQVIASNGENLS >gi|289777623|gb|GG745508.1| GENE 89 102331 - 102957 877 208 aa, chain + ## HITS:1 COG:ECs3360 KEGG:ns NR:ns ## COG: ECs3360 COG0035 # Protein_GI_number: 15832614 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 208 10 217 217 375 93.0 1e-104 MKIVEVKHPLVKHKLGLMREHDISTKRFRELASEVGSLLTYEATADLATEKVTIEGWNGP VEVEQIKGKKITVVPILRAGLGMMEGVLEHVPSARISVVGIYRNEETLEPVPYFQKLVSN IDERMALVVDPMLATGGSMIATIDLLKNAGCTSIKVLVLVAAPEGIAALEKAHPDVELYT ASVDKGLNEHGYIIPGLGDAGDKIFGTK >gi|289777623|gb|GG745508.1| GENE 90 103044 - 104330 1034 428 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 3 426 2 431 447 402 48 1e-110 MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILFHINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVMF PPAAMGAIVAVIGLELAGVAANMAGLLPADGQAPDSKTIIISMVTLAVTVFGSVLFRGFL AIIPILIGVLVGYALSFVMGVVDTTPIAEAHWFALPTFYTPRFEWFAIFTILPAALVVIA EHVGHLVVTANIVKRDLIRDPGLHRSMFANGLSTIISGFFGSTPNTTYGENIGVMAITRV YSTWVIGGAAIIAILLSCVGKLAAAIQIIPVPVMGGVSLLLYGVIGASGIRVLIESKVDY SKAQNLILTSVILIIGVSGAKVHIGAAELKGMALATIVGIALSLIFKLISVLRPEEVVLD AVDSEEVK >gi|289777623|gb|GG745508.1| GENE 91 104453 - 105130 670 225 aa, chain + ## HITS:1 COG:STM2496 KEGG:ns NR:ns ## COG: STM2496 COG0593 # Protein_GI_number: 16765816 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Salmonella typhimurium LT2 # 1 225 17 241 241 431 94.0 1e-121 MPLYLPDDETFASFWPGDNPSLLAALQNVLRQEHSGYIYIWSREGAGRSHLLHAACAELS QRGDAVGYVPLDKRTWFVPEVLEGMEQLALVCIDNIECVAGDEPWEMAIFNLYNRILESG KTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEMPED VCRFLLKRLDREMRSLFMTLDQLDHASITAQRKLTIPFVKEILKL >gi|289777623|gb|GG745508.1| GENE 92 105127 - 106038 955 303 aa, chain - ## HITS:1 COG:PSLT051 KEGG:ns NR:ns ## COG: PSLT051 COG5464 # Protein_GI_number: 17233500 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 2 301 4 311 313 366 60.0 1e-101 MKKPTSTPHDAVFKTYLSHPDTARDFLQLYLPETLLKVCDLRTLHLESGHFVEDDLRPFY ADILYSLKTTAGDGYIYALIEHQSTPDRHMAFRLMRYAIAAMQRHLDAGHDQLPLVIPVL FYHGLASPYPYSLRWLDEFAAPELANRLYHEAFPLADITVIPDDDIATHQRMATLELLQK HIRQRDLAQLLDKLSELLLTGLATQSQVQALMHYLVQAGNTREPIKFIRELALRTPQHKE TLMTIAEYLEQQGLERGLAQGRQEGRKEEAQRIAAAMLHCGLARDLVAHLTGLTEQELAP LAD >gi|289777623|gb|GG745508.1| GENE 93 106167 - 106526 501 119 aa, chain - ## HITS:1 COG:yfgD KEGG:ns NR:ns ## COG: yfgD COG1393 # Protein_GI_number: 16130420 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 118 1 118 119 169 77.0 1e-42 MTDAVTIYHNPRCSKSRETLSLLQSRGIDPQVVLYLDTPPDADTLRELLQLLGMESPREL MRQKEDLYKSLNLADQALSDAALIQAMVDNPKLIERPIVVSRGQARIGRPPEQVLEIVS >gi|289777623|gb|GG745508.1| GENE 94 106536 - 107999 1898 487 aa, chain - ## HITS:1 COG:STM2494 KEGG:ns NR:ns ## COG: STM2494 COG4783 # Protein_GI_number: 16765814 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Salmonella typhimurium LT2 # 1 487 1 487 487 786 85.0 0 MFRQLKKTLVATVIASLTLGSIGPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL RGSAPLINDPLLVQYINGLGMRLVAHANSVRTPFHFYLINNDQINAFAFFGGNVVLHSAL FRYSDNESELASVMAHEISHVTQRHLARAMEDQKRNAPLTWVGALGSILLAMASPQAGMA ALTGTLAGTQQGMISFTRQNEEEADRIGIQVLQRSGFDPQAMPMFMGKLLDESRYSTRPP EMLLTHPLPESRLADARNRANQMRPVVVQSSADFYLAKARTLGMYTNGDNKLGTDLLNAW DKGNIRQQHAAQYGRALLAMESNNFDQARKTLQPLLSADPQNAWYLDLATDIDLGQKKTS DAINRLKNARELRTNPVLQLNLANALLQGGQPGEAATILNRYTFTNKEDGNGWDLLAQAE GALGNRDQELAARAESMALVGQLEQAISLLSSASSQVKLGSLQQARYDARIDQLRDLQAR FRPYQKM >gi|289777623|gb|GG745508.1| GENE 95 108222 - 109286 1771 354 aa, chain + ## HITS:1 COG:ECs3355 KEGG:ns NR:ns ## COG: ECs3355 COG0628 # Protein_GI_number: 15832609 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 550 92.0 1e-156 MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE RIGLSRTWATSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRR YPALMDAGIIDAMAENMRNRMLTVGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKDK EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVL FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGLVVDDD >gi|289777623|gb|GG745508.1| GENE 96 109347 - 109817 614 156 aa, chain - ## HITS:1 COG:STM2491 KEGG:ns NR:ns ## COG: STM2491 COG1225 # Protein_GI_number: 16765811 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 156 1 156 156 316 96.0 1e-86 MTPLKAGDIAPKFSLPDQDGEEVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDDL KKAGVEVLGISTDKPEKLSRFAEKELLNFTLLSDENHQVCEQFGVWGEKSFMGKTYDGIH RISFLVDADGKIEHVFDDFKTSNHHDVVLNWLKENA >gi|289777623|gb|GG745508.1| GENE 97 109821 - 110387 248 188 aa, chain - ## HITS:1 COG:STM2490 KEGG:ns NR:ns ## COG: STM2490 COG2716 # Protein_GI_number: 16765810 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Salmonella typhimurium LT2 # 1 188 23 211 212 329 86.0 2e-90 MTASLQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGDEFTFIMLLSGSWNA INLIESTLPLKGAELELLIVMKRTTARPPQAMPNTVWVQVEVPDSPHIIERFTALCDTWN MNIAELVSRTQPGDGDSAQLFIQITAHSPATQNAANIEQAFKALCTELNAQGSINIVNYS QHDEQDGV >gi|289777623|gb|GG745508.1| GENE 98 110577 - 111419 796 280 aa, chain + ## HITS:1 COG:STM2489 KEGG:ns NR:ns ## COG: STM2489 COG0329 # Protein_GI_number: 16765809 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Salmonella typhimurium LT2 # 1 280 13 292 292 519 91.0 1e-147 MDENGNVCRTSLKKLIDYHVANGTSAIVSVGTTGESATLSHEEHGDVVMMTLELADGRIP VIAGTGANATAEAISLTKRFNDSGVVGCLTVTPYYNRPTQEGLFQHFKAIAEHTDLPQIL YNVPSRTGCDMLPETVGRLAEIKNIVGIKEATGNLSRVHQIKELVSDDFILLSGDDATGM DFMQLGGVGVISVTANVAAREMADMCRLALAGQFAEARAINQRLMPLHTKLFVEPNPIPV KWGCKALGLVATDTLRLPMTPITDHGREAVTAALKHAGLL >gi|289777623|gb|GG745508.1| GENE 99 111436 - 112470 1176 344 aa, chain + ## HITS:1 COG:STM2488 KEGG:ns NR:ns ## COG: STM2488 COG3317 # Protein_GI_number: 16765808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Salmonella typhimurium LT2 # 1 344 1 344 344 548 86.0 1e-156 MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLQASPLSELHAPAGMILPI QVGDYNIPVANSTGAVGKALDIRPPAQPLALVSGARTQFNGDTATLMVENGRSGSLWAQV TSILQSKNYVIAKRDDASQTLNTDWVEWNRLDEDQQYRGRYQISVKPQGYQQAVVVKLVN LEQAGKPVADPASLQRYSTAMLNVISEGLDASATSAQNAAQRSAGATFDVQSAADDTGLP MLVVRAPFNMVWQRLPGALEKVGMKVTDSTRSQGSMALTYKPLSDSSWQELGARDPQLAS GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFNK >gi|289777623|gb|GG745508.1| GENE 100 112687 - 113400 1122 237 aa, chain + ## HITS:1 COG:STM2487 KEGG:ns NR:ns ## COG: STM2487 COG0152 # Protein_GI_number: 16765807 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Salmonella typhimurium LT2 # 1 237 1 237 237 447 93.0 1e-126 MKKQAELYRGKAKTVYSTDNPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMSK LAEAGIPTQMEALLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDL FLKNDAMHDPMVNDSYCETFGWVSKENLARMRELTYKANDVLKKLFDDAGLILVDFKLEF GLFKGEVVLGDEFSPDGSRLWDKNTLDKMDKDRFRQSLGGLIEAYEEVAHRLGVKLD >gi|289777623|gb|GG745508.1| GENE 101 113520 - 114395 1195 291 aa, chain + ## HITS:1 COG:ECs3337 KEGG:ns NR:ns ## COG: ECs3337 COG2321 # Protein_GI_number: 15832591 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Escherichia coli O157:H7 # 1 291 1 287 287 470 82.0 1e-132 MRWQGRRESDNVEDRRGQSGSPFGGGGGGGFRLPSGKGGIVLLIIVLVAGYYGVDLTGML TGEPMPQQQTSTQRSISPKDDEAAKFTSVILATTEDTWGPIFEKMGRQYPQPKLVLYRGA TRTGCGTGQSVMGPFYCPADSTVYIDLSFYDEMKNKLGADGDFAQGYVIAHEVGHHVQKL LGIEPKVRQQQQHATEAEANRLSVKMELQADCFAGVWGHNMQQQDILETGDLQEALNAAE AIGDDRLQQQSQGRVVPDSFTHGTSKQRYTWFKRGFDSGDPAQCNTFGSAL >gi|289777623|gb|GG745508.1| GENE 102 114405 - 116408 1714 667 aa, chain + ## HITS:1 COG:ypfI KEGG:ns NR:ns ## COG: ypfI COG1444 # Protein_GI_number: 16130399 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Escherichia coli K12 # 2 667 4 670 671 788 63.0 0 MMDALLDLTAQMAREGIRRLLVLSGDEAWTLQQAQALRERLGGDGLWVGPDPVSAPCVAP GALKTLLGREVMHAFFDARRGCDVAALAALSGTLRAGSWLVLLTPPFADWLTRADEDSLR WSDTPDPIVTPNFVHRCCRQFIADPEVLLWQQSDRPRFPLAAPRPDWHPADGHPQAEQAL ILEQLLRLPPGIAAVTAERGRGKSALAGMLLRQLEGEAIVTAPTRSAVEVLASFAGEAFR FMAPDALLASQETAAWLIVDEAASIPAPLLRQLVSRFPRTLLTTTVQGYEGTGRGFLLKF CASLPRLQSFSLSAPIRWAAGCPLESAIRQLLIFNDEAFRDAPTGEVVLEAVNQSCWQSQ PALPEAMYQLLSGAHYRTSPLDLRRMMDAPGQAFRCARASGAVAGALWLVAEGGLSPELS RAVWAGFRRPRGNLVAQSLAAHGGSPLAATLSGLRVSRIAVHPARQREGLGQKMIASIAA DAAGYDYLSVSFGYTPELWRFWQRCGFILVRLGTHREASSGCYTAMALFPLTAAGHQLAQ REAQRLLRDEYWLRPWRDESAPLPAVADAMLSDEDWLEAASFAFAHRPLAAALGCLNRLL MQVDMPLPALRRRLQGEEEAALCAALQLTGRKALLARWRQEAADALCFLDAARAEALRQQ VAHLQFF >gi|289777623|gb|GG745508.1| GENE 103 116485 - 117180 877 231 aa, chain + ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 231 9 240 240 377 80.0 1e-104 MKHDHFIVQSPATPAQQLLLLFHGVGDNPVSMGQIGSWFAPQFPDALIVSIGGVEPCGPN GRQWFSVQGVTEENRQQRIDAIMPTFIDIVRYWQEKSGVSPLATALIGFSQGAIMSLESI KAAPDLASRVIAFNGRYATLPMTATTATTIHLIHGGEDRVIDLAWAVSAQEALQQAGGDV TLDIVDDLGHAIDDRSMQFAIERLRYTVPKHYFDEALSGSTPKGDDIIEML >gi|289777623|gb|GG745508.1| GENE 104 117229 - 117432 352 67 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1249 NR:ns ## KEGG: Kvar_1249 # Name: not_defined # Def: cytochrome # Organism: K.variicola # Pathway: not_defined # 1 67 1 67 67 80 100.0 2e-14 MEWLIKHWWILVLVFLVGVIINVIKDLNRVDHKKFLNNKPDLPPHRDFNDKWDDDDDWPK HDQSKKP >gi|289777623|gb|GG745508.1| GENE 105 117459 - 118586 1373 375 aa, chain - ## HITS:1 COG:STM2483 KEGG:ns NR:ns ## COG: STM2483 COG0624 # Protein_GI_number: 16765803 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Salmonella typhimurium LT2 # 1 375 1 375 375 731 91.0 0 MSCPVIELAQQLIRRPSLSPDDAGCQALMIERLRAIGFTVEPMDFGDTQNFWAWRGHGET LAFAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQYPN HRGRLAFLITSDEEASAKNGTVKVVETLMARNERLDYCLVGEPSSTEVVGDVVKNGRRGS LTCNLTIHGVQGHVAYPHLADNPVHRAAPMLAELVNIEWDKGNEFFPPTSMQIANVQSGT GSNNVIPGDMFVQFNFRFSTELTDEMIKARVVSLLEKYQLRYSVEWWFSGQPFLTGRGKL VDAVVSAIEHYNEIKPQLLTNGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ LLARMYQRVMEQLVA >gi|289777623|gb|GG745508.1| GENE 106 118590 - 118943 488 117 aa, chain - ## HITS:1 COG:STM2482 KEGG:ns NR:ns ## COG: STM2482 COG1393 # Protein_GI_number: 16765802 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Salmonella typhimurium LT2 # 1 114 1 114 118 193 77.0 7e-50 MLTMYGIKNCDTIKKARRWLEAHQIAYQFHDYRADGLDRAQLDTFIAELGWQALLNTRGT TWRKLDESLRNSIDNADAAAALMLEMPAIIKRPLLCAPGRPMLLGFSEASYQQFNEV >gi|289777623|gb|GG745508.1| GENE 107 119496 - 122609 3954 1037 aa, chain - ## HITS:1 COG:STM2481 KEGG:ns NR:ns ## COG: STM2481 COG0841 # Protein_GI_number: 16765801 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1037 1 1037 1037 1869 91.0 0 MANFFIDRPIFAWVLAILLCLTGTLAILSLPVEQYPDLAPPNVRITANYPGASAQTLENT VTQVIEQNMTGLDNLMYMSSQSSATGQATITLSFTAGTDPDEAVQQVQNQLQSAMRKLPQ AVQNQGVTVRKTGDTNILTLAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS QYSMRIWLDPAKLNSYQLTTKDVTDAISSQNAQIAVGQLGGTPSVDKQALNATINSQSLL QTPEQFRNITLRVNQDGSEVTLGDVATVEMGAEKYDYLSRYNRQAASGLGIKLASGANEM ATAERVINRLNELSQYFPHGLEYKVAYETTSFVKASITDVVKTLLEAILLVFLVMYLFLQ NFRATLIPTIAVPVVLMGTFAVLYACGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM SEEGLSPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL SVLVAMILTPALCATLLKPVKPGESHERKGFFGWFNRTFNRSASRYETFVGKILHRSLRW MLIYVVLLGGMVFLFLHLPTSFLPLEDRGMFTTSVQLPSGATQQQTLKVVQKAEDYFLNN EKQNVESVFATVGSGPGGNGQNVARMFVRLKDWDQRDPETGSSFAIIERATKAFNQINEA RVIASSPPAISGLGSSAGFDMELEDHAGKGHDALMAARDTLLELAGKNPLLTRVRHNGLD DSPQLQVDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAKYRML PDDINLWYVRNSSGTMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGISTGTAMD MMEKLAAQLPTGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM LVVPLGVIGALLATWVRGLENDVYFQVGLLTVIGLSAKNAILIVEFANELNEKGQDLLSA TLSACRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATVLAIFFVP LFFVLVRRRFPLKERPQ >gi|289777623|gb|GG745508.1| GENE 108 122982 - 124964 2016 660 aa, chain + ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 183 660 2 479 479 797 80.0 0 MNHFILSDSRKCIGCQACEVACVMAHNEEQHVLTPQRFLPRITVIKAAGQRNAITCRHCE DAPCVRSCPNDAIAQSGDSVQVSQEKCIGCKSCMVACPFGVMQVVVTPQAAGLVKASALK CDLCQGREAGPACVENCPAQALTLADDETLTALAKQRRLRSACQEVQPWQRGTLTCSQPN VGAKVRQMAMTPPRGEPDKLAAEARKSHFEEIYQPFTPAQAQQQAARCLTCGEHSICEWT CPLHNHIPQWVELVKAGDIAAAVALSHQTNCLPEITGRVCPQDRLCEGACTLRDESGAVT IGNIERYISDQALASGWRPDLSQVKPSGKRVAIIGAGPAGLACADVLVRHGVQPVVFDRH PEIGGLLTFGIPAFKLDKSLLARRRAIFSEMGIRFELNCEVGKDIPMATLLADYDAVFVG AGTYRSMKAGLPNEEAPGVYDALPFLIANTKQVMGLAASAQEPYINTAGLNVVVLGGGDT AMDCVRTALRHGARQVTCAYRRDEANMPGSKKEVKNAREEGAVFEFNVQPVTLELDESGR VNGVRFLRTELGAPDAGGRRRPTPIPGSEFVMPADAVIMAFGFHPHRMPWLEAAGVALDS QGRIKAGVESRYRYQTSQEKIFAGGDAVRGADLVVTAMAEGRHAAQGILDYLALKTTPLH >gi|289777623|gb|GG745508.1| GENE 109 125023 - 125619 724 198 aa, chain + ## HITS:1 COG:STM2477 KEGG:ns NR:ns ## COG: STM2477 COG0494 # Protein_GI_number: 16765797 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 190 1 190 191 309 78.0 3e-84 MSLNIHVIKDKILSENWFVLRNMTYELTRADGSVVRHKREVYDRGNGATVLLYNRHKQTV VLVRQFRVATWVNGNHDGMLIETCAGLLDNDEPEACIRKEAVEETGYEVGEVRKLFELFM SPGGVTEVVHFFIAEYSDAQRTTSGGGVDDEAIEVLELPFSQALQMVADGEIRDGKAVIL LQYLQTSGLMSGNSDKSD >gi|289777623|gb|GG745508.1| GENE 110 125683 - 126729 910 348 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1255 NR:ns ## KEGG: Kvar_1255 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 348 1 348 348 706 100.0 0 MLFRIIFFLFLAVLPCSQAWSAPTQQRFNDWQVTCNNQNFCVTRNVGLHYGLVMTLSRSA GAVTDASLRIELGGTGNPVATLAPIAPRLLLDGKPVSLTDKRWHIEDKLIKTADSVTIDA FLQQVQEGKALSLANGLQSISLQGLKAALFFIDDRQKRVGSETAWVGKGEEPPLSVPPAP ALRAVATAETAQSPLGREELNDLMDYGNERMTNSNCSLDPFRREIRVTALTDDKVLLMTS CESGAYNTVWLAWLVSRQRPYVARQVRLTLPFQPPGEAPREIELINASYDDRRHELVTLD KGREAGDCGIQTRWRFDGQRFSLSRYAQQPTCDNWQGPDAWPTLWITR >gi|289777623|gb|GG745508.1| GENE 111 126719 - 128713 2574 664 aa, chain - ## HITS:1 COG:STM2474 KEGG:ns NR:ns ## COG: STM2474 COG0021 # Protein_GI_number: 16765794 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Salmonella typhimurium LT2 # 1 663 1 663 666 1156 83.0 0 MSRRELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPQNPGWVDRDRFI LSNGHASMLLYSLLHLTGYDLPLSELKQFRQLHSKTPGHPEHGYTPGVETTTGPLGQGLA NAVGMAIAERTLAAQFNRPGHEIIDHHTWVFMGDGCLMEGISHEACSLAGTLGLGKLIGF YDHNGISIDGKTEGWFSDDTAERFRAYHWHVIGDIDGHDPQAIKQAIAEAQAVKDKPSLI ICRTIIGFGSPNKAGSEESHGAALGEKEVALARQQLGWKYPPFEIPKEIYQGWDARPRGE KAEHAWNEKFAAYQQQFPELAAELTRRMDGTLPEDFAATARDYVAKLQAEPAKIASRKAS QNALNAYGPHLPELLGGSADLAPSNLTIWSGSTSIKDDPAGNYIHYGVREFGMTAVANGI ALHGGFIPYTSTFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVETAVAWQAAIARQNGPTALILSRQNLAQMPRTPEQVQAIARGGY VLKDAGGKPDLILIATGSEVEITVLAAEKLLANGVNVRVVSLPSTDVFDAQDEAWRESVL PSDVSARVAVEAGIADYWYKYVGLKGKIVGMTGYGESAPAEQLFPFFGFTVDHIVATAEQ VLNG >gi|289777623|gb|GG745508.1| GENE 112 128730 - 129686 1410 318 aa, chain - ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 554 86.0 1e-158 MNQLDSIKQFTTVVADSGDIESIRHYHPEDATTNPSLLLKAAGLASYSGLIDDAIAWAKK QGGGREAQVTHACDKLAVNFGAEILKSIPGRVSTEVDARLSFNREKSIEKARHLVALYQE MGIDKSRILIKLASTWEGIRAAETLEKEGIHCNLTLLFSFAQARACAEAGVYLISPFVGR IYDWYQARKPLDPYVVEEDPGVKSVRNIYDYFKQHKYTTIVMGASFRRTEQILALVGCDR LTIAPPLLKELQASDAPVVRKLIPASQILPRPVPLSEAEFRWEHNQDPMAVEKLAEGIRL FAVDQRKLEDLLAAKLSL >gi|289777623|gb|GG745508.1| GENE 113 129981 - 132260 3402 759 aa, chain + ## HITS:1 COG:STM2472_1 KEGG:ns NR:ns ## COG: STM2472_1 COG0281 # Protein_GI_number: 16765792 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 825 96.0 0 MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLAAYKY TARGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI NVVAALEPTFGGINLEDIKAPECFYIEQQLRERMNIPVFHDDQHGTAIISTAAILNGLRV VEKNLSDVRMVVSGAGAAAIACMNLLVALGMQKHNIVVCDSKGVIYKDREPNMAETKAAY AVEDDGKRTLDDVIDGADIFLGCSGPKVLTPEMVKKMARAPLILALANPEPEILPPLAKQ VRDDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVHAIAELAHAEQS EVVASAYGDQDLSFGPDYIIPKPFDPRLIVKIAPAVAKAAMDSGVATRPIADFDAYIEKL SEFVYKTNLFMKPIFSQARKEPKRVVLAEGEETRVLHATQELVSLGLAKPILVGRPSVIE MRIQKLGLQIKAGVDFEIVNNESDPRFKEYWSEYYQLMKRRGITQEQAQRAVISNTTVIG AIMVHRGEADAMICGTIGEYHDHYRVVQPLFGYRDGVSTAGAMNALLLPSGNTFIADTYV NHDPSPEELAEITLMAAESVRRFGIEPRVALLSHSNFGSADCPSASKMRKTLELVKASAP ELMIDGEMHGDAALVESIRNDRMPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTV GPVLMGVAKPVHILTPIASVRRIVNMVALAVVEAQTEPL >gi|289777623|gb|GG745508.1| GENE 114 132479 - 132814 443 111 aa, chain + ## HITS:1 COG:ECs3324 KEGG:ns NR:ns ## COG: ECs3324 COG4810 # Protein_GI_number: 15832578 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 111 25 135 135 200 92.0 6e-52 MDKERIIQEFVPGKQVTLAHLIAHPGAELAKKIGVPESGAIGIMTLTPGETAMIAGDLAM KAADVHIGFLDRFSGALVIYGSVGAVEEALLQTIGGLGRLLNYTLCELTKS >gi|289777623|gb|GG745508.1| GENE 115 132827 - 133306 418 159 aa, chain + ## HITS:1 COG:STM2469 KEGG:ns NR:ns ## COG: STM2469 COG4917 # Protein_GI_number: 16765789 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 158 1 158 159 253 77.0 1e-67 MKRIAIVGAVGAGKTTLFNALQGNYSLARKTQALEFNDRGDIDTPGEYFSHPRWYHALIT TLQDVDTLIYVHAANDTESRLPPGLLDIGSRKHLIVAISKTDLPDANVAAVRQLLDGMGF QAPVFALNGCDPQSVASLENYLSELSQKEEGPGEKTHYR >gi|289777623|gb|GG745508.1| GENE 116 133284 - 133973 888 229 aa, chain + ## HITS:1 COG:STM2468 KEGG:ns NR:ns ## COG: STM2468 COG4766 # Protein_GI_number: 16765788 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 402 87.0 1e-112 MKKLITANDIRAAHARGEQAMSVVLRASIITPEAREVAELLGFTITEDDGAAPAATAADS DKTESQRIRETILAQLPEGQFTESLVAQLMEKVMKEKQSLEQEAMQPGFDSVTGKGGIKV IDGSSVKFGRFDGAQPHCVGLTDLVTDQDGSSMAAGFMQWENAFFPWTLNYDEIDMVLEG ELHVRHQGETLIAKAGDVMFIPKGASIEFGTPSTVRFLYVAWPANWQSL >gi|289777623|gb|GG745508.1| GENE 117 133970 - 134779 831 269 aa, chain + ## HITS:1 COG:STM2467 KEGG:ns NR:ns ## COG: STM2467 COG4812 # Protein_GI_number: 16765787 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization cobalamin adenosyltransferase # Organism: Salmonella typhimurium LT2 # 1 264 1 264 267 402 79.0 1e-112 MNDFITEAWLRANHTLSEGGEIHLPADARLTPSARELLESRHLRVKFLDRQGRLFVEDDE QTPQPVHVLTSRDHPPQACCELCHQPVDKKPDTLTHLTADTLVAKNDPRLAFRAVLDSTI ALTVWLQIELAESWQPWLTDIRSRLGNIMRADALEEPLAAQSIAGFSEGQLHRLSHQPLR FLGHDHLVPEARHGREVALLNLLRGKVREAEVTAAQVFITPQFAVRRADIMQALNRLSSA VYVMMILGVTDSPPTLSQLQQQLGGEDDH >gi|289777623|gb|GG745508.1| GENE 118 134769 - 135785 983 338 aa, chain + ## HITS:1 COG:STM2466 KEGG:ns NR:ns ## COG: STM2466 COG0280 # Protein_GI_number: 16765786 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Salmonella typhimurium LT2 # 1 338 1 338 338 506 81.0 1e-143 MIIDQCRKLALRAPARVVFPDALDVRVLKAAHYLQQQGLARPILVASPFALRQFSLGERL PLTGVQIIDPHSNLAMREAFAAAWQARAGDKAPADAVDKLADPLIFAAAMVSGGEAEVCI AGNLSSTASVLRAGLRLIGLQPGCKTLSSLFLMLPQYAGQPLGFADCSVVPQPTAAQLAD IAIASAETWQAIAGEAPRVAMLSFSTHGSARHPCVANVQQATEIVRQRAPQLMVDGELQF DAAFVPDVAAHKAPGSPLRGRANVLVFPSLEAGNIGYKIAQRLGGYRAIGPLIQGLAAPL HDLSRGCSVEEIIELALVASVPRQTDASRIPDSSTLVE >gi|289777623|gb|GG745508.1| GENE 119 135824 - 136114 449 96 aa, chain + ## HITS:1 COG:STM2465 KEGG:ns NR:ns ## COG: STM2465 COG4577 # Protein_GI_number: 16765785 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 96 1 96 96 147 98.0 6e-36 MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLVTAMVRGDVAACKAATDAGA AAAQRIGELVSVHVIPRPHGDLEEVFPISFKGDSNI >gi|289777623|gb|GG745508.1| GENE 120 136243 - 136530 264 95 aa, chain + ## HITS:1 COG:cchB KEGG:ns NR:ns ## COG: cchB COG4576 # Protein_GI_number: 16130381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 95 1 95 95 147 81.0 4e-36 MKLAVVTGYVVCTVRHEGLAHDKLLMVEMLNARGEPDGQCAVAIDNIGAGCGEWVLLVSG SSARQAHAQGASPVDLCVIGIVDEAAADGQVLFHK >gi|289777623|gb|GG745508.1| GENE 121 136542 - 137945 853 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 454 1 461 477 333 40 2e-89 MNQQDIEQVVKAVLLKMKDSSQPADAVHDRGVFASLDDAVAAATAAQQGLKRVAMRQQVI QAIREAGEKHARELAELAVTETGMGRVEDKFAKNVAQARGTPGVECLTPQVLTGDNGLTL IENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVVFAPHPAAKQVSQRAITLLNQAVV AAGGPANLLVTVANPDIDTAQRLFKYPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNP PVVVDETADLPRAAQAIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQQAVKLTAA QAEQLQPLLLKNIDERGKGTVSRDWVGRDAGKIAAAIGLQVPAQTRLLFVETPASHPFAV TEMMMPVLPVVRVANVEEAIALAVQLEGGCHHTAAMHSRNIDNMNQMANAIDTSIFVKNG PCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV >gi|289777623|gb|GG745508.1| GENE 122 137955 - 138794 737 279 aa, chain + ## HITS:1 COG:STM2462 KEGG:ns NR:ns ## COG: STM2462 COG4820 # Protein_GI_number: 16765782 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Salmonella typhimurium LT2 # 1 279 1 279 279 507 89.0 1e-143 MAHDEQRWLSPRLQKAAALCNQAPAASESPLWLGIDLGTCDVVSMVVDRDGQPVAVCLDW ADVVRDGIVWDFFGAVTLVRRHLATLEQQLGCRFAHAATSFPPGTDPRISINVLESAGLE ISHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKQGRVTYSADEATGGHHISLTLAGN RGIGLEEAEQYKRRHAGEIWPVVKPVYEKMAEIVARHITGQGIGDLWLAGGACMQPGVRA LFCQCFPTLKVHLPRHSLFMTPLAIANSGREKAEGIYAS >gi|289777623|gb|GG745508.1| GENE 123 138784 - 139971 1515 395 aa, chain + ## HITS:1 COG:STM2461 KEGG:ns NR:ns ## COG: STM2461 COG1454 # Protein_GI_number: 16765781 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 1 394 1 394 395 602 85.0 1e-172 MQAELQTALFHAFDTLNLQQVKSFNVPPVTLHGVGALAACGPQAQARGLKHLFVMVDRFL HQAGMTAGLERSLAMKGVAMTLWPCPAGEPCVTDVCAAVAQLRDARCDGVVAFGGGSVLD AAKAVALLVANPEQTLGEMTEHSELQPRLPLIAVPTTAGTGSETTNVTVIIDAVSGRKQV LAHASLMPDVAILDAALTEGVPPSVTAMTGIDALTHAVEAYSARHATPFTNSLAMGAIAM IGEALPKAVGCGQDLAARENMLLASCMAGMAFSSAGLGLCHAMAHQPGAALHIPHGLANA MLLPTVMGFNRMVCRGRFSQIGRALTGRKTDDLEAIAAVRELIAEVGLTMRLSDAGATPA HYATWAQAAQDDICLRTNPRTATREQIIELYAAAQ >gi|289777623|gb|GG745508.1| GENE 124 140171 - 141403 1884 410 aa, chain + ## HITS:1 COG:STM2460 KEGG:ns NR:ns ## COG: STM2460 COG3192 # Protein_GI_number: 16765780 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 410 1 408 408 628 92.0 1e-180 MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKLGKSIEGSGGQFEEGFMAMGALGL AMVGMTALAPVLAHLLGPVIIPLYEMLGANPSMFAGTLLACDMGGFFLAKELAGGDVAAW MYSGLILGSMMGPTIVFSIPVALGIIEPADRRWLALGVLAGIVTIPIGCIAGGLVAMYSG VEINGQPVAFTFALILMNMIPVIIVAVLVALGLKFIPEKMINGFQIFAKFLVALITIGLA AAVIKFLLGWELIPGLDPIFMAPGDQPGEVMRAIEVIGSISCVLLGAYPMVLLLTRWFEK PLMRVGNLLKINNMAAGGMVATLANNIPMFGMMKQMDTRGKVINCAFSVSAAFALGDHLG FAAANMNAMIFPMIVGKLVGGVTAIGVAMLLVPKDENVPAPANTEAEAHS >gi|289777623|gb|GG745508.1| GENE 125 141400 - 142803 1592 467 aa, chain + ## HITS:1 COG:STM2459 KEGG:ns NR:ns ## COG: STM2459 COG4819 # Protein_GI_number: 16765779 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition # Organism: Salmonella typhimurium LT2 # 1 467 1 467 467 785 89.0 0 MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKRDISWQSPVFFTPVDKQ GELKEAELEALILAQYRAAGIAPQAVDSGAIIITGESAKTRNARPAVMALSQSLGDFVVA SAGPHLESVIAGHGAGAQTLSQQRMCRVLNIDIGGGTSNYALFDAGNLSATACLNVGGRL LETDAQGRVVHAHSPGQRIVDAVFGPGTNALSLTAGQLAQVARRMAGLIVEVIDGRLSPL AQGLMQTEVLPAGVQPEVITLSGGVGECYRHQPADPFCFSDIGPLLATALHEHPRLREMN VQFPTQTVRATVIGAGAHTLSLSGSTIWLERVQLPLRNLPVAIPQDAADLPNAWRQALTQ LDLAPEADAYVLALPASLPVRYATLLTVIDALLAFVARFPNPRPLLLVAEQDFGKALGML LRPQLPHLPLAVIDEVSVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS >gi|289777623|gb|GG745508.1| GENE 126 142815 - 144176 2051 453 aa, chain + ## HITS:1 COG:STM2458 KEGG:ns NR:ns ## COG: STM2458 COG4303 # Protein_GI_number: 16765778 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Salmonella typhimurium LT2 # 1 453 1 453 453 892 95.0 0 MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAESSQQRVAAKQVLSDMTVADIR NNPVIPYEEDCVTRLIQDDVNETAYQRIKHWTISDLREYVLNDEVTSDDIAFVRKGLTSE VVAAVAKICSNADLIYGGKKMPVIKKANTTIGLPGTFSCRLQPNDTRDDVQSIAAQIYEG LSFGAGDAVIGVNPVTDDVENLSRVLDTVYGVIDKFTIPTQGCVLAHVTTQIEAIRRGAP GGLIFQSICGSEKGLKEFGVELEMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANF GADQVTMEARNYGLARHYDPFLVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMG CDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLG LRPSPEFEGWLERMGIMANGRLTKRAGDPSLFF >gi|289777623|gb|GG745508.1| GENE 127 144197 - 145099 1116 300 aa, chain + ## HITS:1 COG:STM2457 KEGG:ns NR:ns ## COG: STM2457 COG4302 # Protein_GI_number: 16765777 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Salmonella typhimurium LT2 # 1 300 1 298 298 498 89.0 1e-141 MDQKQIEDIVRSVMASMGQPQTQPEAPVATTPACHAAACATDAIVESCALDLGSAEAKAW IGVQHPHRAEVLTELKRSTAARVCTGRAGPRPRTLALLRFLADHSRSKDTVLKEVPEAWV KAQGLLEVRSEISDKNRYLTRPDLGRRLSPEAIDALKAQCVMDPDVQVVVSDGLSTDAIT ANYEEILPPLLAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQS ESLSCYAVYSPRVATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMSR >gi|289777623|gb|GG745508.1| GENE 128 145109 - 145768 482 219 aa, chain + ## HITS:1 COG:STM2456 KEGG:ns NR:ns ## COG: STM2456 COG4816 # Protein_GI_number: 16765776 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 366 96.0 1e-101 MPALDLIRPSVTAMRVIASVNDGFARELKLPPHIRSLGLITADSDDVTYIAADEATKQAM VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMMAHIESGAAFQWANDAQ DTAFLAHVVSRTGSYLSSTAGIALGDPIAYLVAPPLEATYGIDAAMKSADVQLVTYVPPP SETNYSAAFLTGSQAACKAACNAFTDAVLDIARHPVQRA >gi|289777623|gb|GG745508.1| GENE 129 145780 - 146265 264 161 aa, chain + ## HITS:1 COG:eutK KEGG:ns NR:ns ## COG: eutK COG4577 # Protein_GI_number: 16130363 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 159 3 166 168 211 78.0 3e-55 MINALGLLEVEGMVAAVDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG SVAAERTGCVISRREIGRPEEDTQWLIGGFQPPPPAPLPPADPASSEALLTLLASVRQGM TAGEVAAHFAWPLDKARQALDQLFSAGTLRKRSSRYRLKNP >gi|289777623|gb|GG745508.1| GENE 130 146311 - 147363 1167 350 aa, chain + ## HITS:1 COG:eutR KEGG:ns NR:ns ## COG: eutR COG2207 # Protein_GI_number: 16130362 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 349 1 349 350 612 84.0 1e-175 MKKRRSANLHHLCCEALPENTRLTPQVEIDNIHQRHTTDVYEHALTITAWQQIYDQLHPG QFRGEFTEILLDEIQVFREYTGLALRQSCVVWPNAFWFGIPAARGEQGFIGSQCLGRAEI ATRPGGTEFELSTPDDYTILGVVISEEVISRHASFLHHPERVLHMLRNQSALAVREPHKA ALWGFVQQALATFSEHPDTLHQPVVRKVLRDNLLLAMGTMLEEAQPMVSAESISHQSYRR LLAQAREYVLENSAEPLTVLDLCQQLYVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE LISPWSERETVKEAAMQWGFWHLGQFATDYQQLFAEKPSMTLHHRLRQWV >gi|289777623|gb|GG745508.1| GENE 131 147407 - 148306 1031 299 aa, chain - ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 1 299 1 299 299 571 90.0 1e-163 MKPDAAQVKTFLLQLQDNLCQQLSAVDGAPFIEDAWQREGGGGGRSRVLRDGNVFEQAGV NFSHVHGDAMPASATAHRPELAGRSFEAMGVSLVVHPLNPYVPTSHANVRFFIAEKPGAD PVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCLPFGEKVYPRYKKWCDDYFYLKHRQEQR GIGGLFFDDLNTPDFDHCFAFMQAVGNGYADAYLPIVERRKATPYGERERHFQLYRRGRY VEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPEPGSPEAALSEFIQVRDWL >gi|289777623|gb|GG745508.1| GENE 132 148306 - 149178 1140 290 aa, chain - ## HITS:1 COG:ECs3306 KEGG:ns NR:ns ## COG: ECs3306 COG0860 # Protein_GI_number: 15832560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 290 1 289 289 488 90.0 1e-138 MSTFKPLKILASRRQVLKAGLAAMTLSGVAAQVSAKEQPLKTSNGHSKPAAKKAGARRVV MLDPGHGGIDTGAIGHNGSKEKHVVLAIAKNVRSILRSNGIDARLTRTGDTFIPLYDRVE IAHQHGADLFMSIHADGFTNPSAAGASVFALSNRGASSAMAKYLSDRENRADEVAGKKAT DKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSIPSV LVETSFITNPNEEKLLGTTAFRQKIATAIANGIISYFHWFDNQKAHSKRR >gi|289777623|gb|GG745508.1| GENE 133 149390 - 149815 670 141 aa, chain + ## HITS:1 COG:STM2449 KEGG:ns NR:ns ## COG: STM2449 COG0456 # Protein_GI_number: 16765769 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 141 38 178 178 272 91.0 2e-73 MEIRVFRQQDFEEVVTLWERCDLLRPWNDPEMDIERKLNHDVSLFLVAEVNGEVVGTVMG GYDGHRGSAYYLGVHPEYRGRGIANALLNRLEKKLIARGCPKINIMVREDNDVVQGMYER LGYEYADVLTLGKRLIEDEEY >gi|289777623|gb|GG745508.1| GENE 134 149802 - 150251 484 149 aa, chain + ## HITS:1 COG:no KEGG:KPN_02776 NR:ns ## KEGG: KPN_02776 # Name: yfeZ # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 149 1 149 149 226 96.0 2e-58 MKNTEFIPADFDAHGRLRLPLLFWCVLLLQARTWVLFLMAGASRQQGDAILNLFYPDHDR FWLGLLPGVPAVLAFLLSGYRQRLPRAWRAMRWLLVLSQLLLLLWQPMLWLSGESPSSLT IGLLVADGYALWWLLTSRRLGACFRQTTF >gi|289777623|gb|GG745508.1| GENE 135 150313 - 150888 768 191 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1280 NR:ns ## KEGG: Kvar_1280 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 191 1 191 191 379 100.0 1e-104 MKSLRLMLCALPLALTGCSTMSAVNWSAAYPWNWFGASTEVTEQGVGKLTASTPLNEQAI SDALGSDYRLRSGMKTDKGNIVHYFEALKDNSVALTINGDNGTISRIDVRDAEIKTASGV KIGTPFSDLYSKAFGNCQKGSNDNGAVVECQAEGSQHISYAFTGHWSGPDELMPSDDTLK NWKVSKIIWRR >gi|289777623|gb|GG745508.1| GENE 136 150983 - 151882 1208 299 aa, chain + ## HITS:1 COG:ECs3302 KEGG:ns NR:ns ## COG: ECs3302 COG2837 # Protein_GI_number: 15832556 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli O157:H7 # 1 299 10 308 308 564 90.0 1e-161 MSQVQSGILPEHCRAAIWIEANVKGDVNALREASKNFVDNVATFQAKFPDAKLGAVVAFG NNVWRQLSGGEGAEELKDFPVYGKGLAPSTQYDLLIHILSARHEVNFSVAQAAMAAFGDA IDVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL KQLNRMSVPDQEMMIGRTKEANEEIDGDERPVTSHLSRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLYNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLERIQAL >gi|289777623|gb|GG745508.1| GENE 137 152541 - 153557 1581 338 aa, chain + ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 337 1 337 338 622 95.0 1e-178 MAVKSLKKGYLALAASMLLAAQAQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDTL TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGNLIPADWQSRLPNNSSPFYS TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVKANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPKVMDALKDKF PQTELFRVEDKFGSWPEVMKTHFASGGELDKLLAAGRK >gi|289777623|gb|GG745508.1| GENE 138 153566 - 154390 1228 274 aa, chain + ## HITS:1 COG:cysU KEGG:ns NR:ns ## COG: cysU COG0555 # Protein_GI_number: 16130349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 274 4 277 277 424 97.0 1e-118 MSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWDVITNPQVVAAYKVT LLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNG IYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQ SFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYP AASAIASVILAASLLLLFSINTLQSRFGRRVVGH >gi|289777623|gb|GG745508.1| GENE 139 154390 - 155265 1292 291 aa, chain + ## HITS:1 COG:STM2442 KEGG:ns NR:ns ## COG: STM2442 COG4208 # Protein_GI_number: 16765762 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 291 1 291 291 504 92.0 1e-143 MAEVTQLKRYDAPRINWGKWFLIGVGMVVSAFILVVPMLYIFIQAFSKGLMPVLENLANP DMLHAIWLTVMIALITVPVNLVFGTLLAWLVTRFTFPGRQLLLTLLDIPFAVSPVVAGLV YLLFYGSNGPLGGWLDAHNLQIMFAWPGMVLATIFVTCPFVVRELVPVMMSQGSHEDEAA VLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE LLEQDYNTVGSFTAAALLTLMAILTLFLKSMLQWRLANQKERAQQEGNHEH >gi|289777623|gb|GG745508.1| GENE 140 155255 - 156349 1700 364 aa, chain + ## HITS:1 COG:ECs3293 KEGG:ns NR:ns ## COG: ECs3293 COG1118 # Protein_GI_number: 15832547 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli O157:H7 # 1 364 1 365 365 684 94.0 0 MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR FHGTDVSRMHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNTAAIKAKVTKL LEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR QLHEELKFTSVFVTHDQEEALEVADRVVVMSQGNIEQADAPERVWREPSTRFVLEFMGEV NRLQGIIRGGQFHVGAHRWPLGYTPTYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEAS PKGHYTQLVVQPLGWYDEPLSVVLAGDEAPSRGERLFVGLQNARLYNGTERIEPRGELAL AESA >gi|289777623|gb|GG745508.1| GENE 141 156459 - 157379 555 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 295 1 304 308 218 38 7e-55 VKIVNTLEHTIGNTPLVKLQRLGPDNGSEVWVKLEGNNPAGSVKDRAALSMIVEAEKRGE IQPGDVLIEATSGNTGIALAMIAALKGYHMKLLMPDNMSQERRAAMRAYGAELILVTKEQ GMEGARDLALEMAQRGEGKLLDQFNNPDNPYAHYTTTGPEIWHQTAGRITHFVSSMGTTG TITGVSRFLREQSKPVAIVGLQPEEGSSIPGIRRWPAEYMPGIFNASLVDAVLDIHQQDA ENTMRQLAVREGIFCGVSSGGAVAGALRIARENPGAVVVAIVCDRGDRYLSTGVFGEEHF SQGAGI >gi|289777623|gb|GG745508.1| GENE 142 157376 - 157771 569 131 aa, chain - ## HITS:1 COG:BS_yybH KEGG:ns NR:ns ## COG: BS_yybH COG4319 # Protein_GI_number: 16081116 # Func_class: S Function unknown # Function: Ketosteroid isomerase homolog # Organism: Bacillus subtilis # 8 129 5 127 129 148 61.0 2e-36 MHHTDLALKAVIEACDRAISQEDYDTLMAYYAEDAALVVKPGMVVRGKENIRKAFIAIAD YFQHRLVVTQGKMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLCTV DNSYGTDLLDD >gi|289777623|gb|GG745508.1| GENE 143 157953 - 159251 1219 432 aa, chain - ## HITS:1 COG:STM2436 KEGG:ns NR:ns ## COG: STM2436 COG1167 # Protein_GI_number: 16765756 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Salmonella typhimurium LT2 # 1 431 1 430 430 525 63.0 1e-148 MFAGKTASDIFDHIRHLVQSGGLQPGEVLPPVRELASQLEVNRNTVAAAYKRLVTSGLAV SQGRNGTAIKARDRLPALEGGDPTTPLNDISSGNPDPARLPELTRYLGQLARTPRLYGDA PIEPRLGQWAEAWFAKEIAVPFAVNLASGAIDALERLLCALLLPGDGVVVEDPCFLSSIN MVRYAGFTPCPVAVDAEGMDPDGLEEALRNGARAVILTPRAHNPTGCSLTETRAHALREV LARYPQVLAIVDDHFALLSATPWHSPLPASTQRWALVRSMSKTLGPDLRLAFIASDADTS AALRLRLNAGSQWVSHLLQDLTLACLTDEAFIASMTETRRHYRQQNEKLAAALARHGHSH ATPGDGLNFWLPLPAASQPYALRLARAGWLVREGEIFGVRTPAHGLRLSLGRLSDAEISR LAADIALVLNQP >gi|289777623|gb|GG745508.1| GENE 144 159334 - 160197 970 287 aa, chain + ## HITS:1 COG:STM2435 KEGG:ns NR:ns ## COG: STM2435 COG2240 # Protein_GI_number: 16765755 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Salmonella typhimurium LT2 # 1 283 1 283 288 407 75.0 1e-114 MGQQDDIQSVLFHDKSRASEVDIVAVQSQVVYGSVGNSIAVPAIKQHGLRVLAVPTVLFS NTPHYETFYGGIIPEEWFVGYLEALEERDALRELRAVTTGYMGNAVQIERLAQWLTRVRA RHPGLCILVDPVIGDVDSGIYVKAEIPDAYRQHLLPLAQGITPNLFELETLSGQRCRNQQ EAVAAARSLLSDTLKWVVITSAPGEARSTINVLVVTADAVEVVAHPRVETDLKGTGDLFC AELVSGLLTGLALGAATQAAARRVLEVMNWTAAQGCDELILPPREKN >gi|289777623|gb|GG745508.1| GENE 145 160197 - 160436 268 79 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1291 NR:ns ## KEGG: Kvar_1291 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 79 1 79 79 152 100.0 5e-36 MKSYRLVIRQQGRIVGHFDTTGEAALEDACVARSLFGLAGGYQCDLLVSDSERRILESTP EGLRILSREKCYQPVTSAI >gi|289777623|gb|GG745508.1| GENE 146 160477 - 160986 825 169 aa, chain - ## HITS:1 COG:STM2433 KEGG:ns NR:ns ## COG: STM2433 COG2190 # Protein_GI_number: 16765753 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Salmonella typhimurium LT2 # 1 169 1 169 169 285 99.0 2e-77 MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDPV IEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >gi|289777623|gb|GG745508.1| GENE 147 161029 - 162756 2143 575 aa, chain - ## HITS:1 COG:STM2432 KEGG:ns NR:ns ## COG: STM2432 COG1080 # Protein_GI_number: 16765752 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Salmonella typhimurium LT2 # 1 575 1 575 575 1012 97.0 0 MISGILASPGIAFGKALLLKEDEIVIDRKKISADKVDQEVERFLSGRAKASAQLEVIKTK AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAANEVIEGQATALEELDD EYLKERAADVRDIGKRLLRNILGLSIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFI TDAGGRTSHTSIMARSLELPAIVGTGSITAQVKNGDYLILDAVNNQVLVNPSNEQIEALR NLQAQVAEEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFL FMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAV RIAMDRKEILRDQVRAILRASAFGKLRIMFPMIISVEEVRALKKEIEIYKQELRDEGKAF DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >gi|289777623|gb|GG745508.1| GENE 148 162801 - 163058 399 85 aa, chain - ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 128 98.0 3e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTLSAEGEDEQKAVEHLVKLMAELE >gi|289777623|gb|GG745508.1| GENE 149 163439 - 164410 705 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 312 3 304 308 276 49 3e-72 MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM KGAIQKAEEIVASNPEKFLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGG TLTGVSRYIKNTKGKKDLITVAVEPTDSPVISQALAGEELKPGPHKIQGIGAGFIPGNLD LKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLREDEAFTNKNIVVILP SSGERYLSTALFADLFTEKELQQ >gi|289777623|gb|GG745508.1| GENE 150 164587 - 165222 811 211 aa, chain - ## HITS:1 COG:ECs3285 KEGG:ns NR:ns ## COG: ECs3285 COG2981 # Protein_GI_number: 15832539 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Escherichia coli O157:H7 # 1 211 43 253 253 353 86.0 1e-97 MGGAFWWLFTRLDSWIPSLMSHVPDWLQWLNYLLWPVVVLSILLVFGYFFSTIANWIAAP FSGLLAEQLEARLTGATPPDVGVFGIMKDIPRIMKREWQKLAWYLPRAIVLLLLYFIPGV GQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFRTMREALRSRKVMNMQFGALTSLFTMI PVLNLVILPVAICGATAMWVDCYRDKHAVWK >gi|289777623|gb|GG745508.1| GENE 151 165582 - 166127 442 181 aa, chain + ## HITS:1 COG:ZzipA KEGG:ns NR:ns ## COG: ZzipA COG3115 # Protein_GI_number: 15802945 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 EDL933 # 1 171 2 184 328 101 56.0 9e-22 MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSRDDESENEDFDDFDD NVEGVGEVRVHPVTHAPHGAHGEHEAPRQAPQHQYQPPYERQMQQPVRPDEPVRQPQQSP RQAPVQPQGQQPVPHAAPQPGWQQPQPAQPSVQPQHQPQPVVQQPVAPQPVTPTVAQPQP S >gi|289777623|gb|GG745508.1| GENE 152 166417 - 166818 614 133 aa, chain + ## HITS:1 COG:STM2428 KEGG:ns NR:ns ## COG: STM2428 COG3115 # Protein_GI_number: 16765748 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 133 197 328 328 231 87.0 3e-61 MNVAAHHGAQLNGEVLINSIQQAGFKFGEMNIFHRHLSPDGSGPVLFSLANMVKPGTFNP DSMADMMTPGVTIFMQVPSYGDELQNFKLMLQSAQYIADEVGGVVLDDQRRMMTPQKLRE YQDRIREVKDANA >gi|289777623|gb|GG745508.1| GENE 153 166888 - 168903 2331 671 aa, chain + ## HITS:1 COG:lig KEGG:ns NR:ns ## COG: lig COG0272 # Protein_GI_number: 16130337 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 670 1 670 671 1217 91.0 0 MEPIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQ RVGAAPLTAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSTDDLTYCCELKLDGLA VSILYENGVLMQAATRGDGTTGEDITSNVRTIRTIPLKLHGENIPARLEVRGEVFLPQAG FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASHS ARLQQFKAWGLPVSDRVTLCHTPEEVLTYYRKVEEDRPHLGFDIDGVVIKVDSLALQEQL GFVARAPRWAVAFKFPAQEQITFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN ADEIERLGLKIGDKVVIRRAGDVIPQVVNVVLSERPADARDVVFPTHCPVCQSDVERVEG EAVARCTGGLICGAQRKESLKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFRLSAG KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAALAAHFGTLEALEQ ASIEELQKVPDVGIVVATHTFNFFAEESNRDVIAQLLAEGVHWPAPVVVKAEEIDSPFAG KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DEAEMMRLLGE >gi|289777623|gb|GG745508.1| GENE 154 168905 - 169123 319 72 aa, chain + ## HITS:1 COG:STM2426 KEGG:ns NR:ns ## COG: STM2426 COG3530 # Protein_GI_number: 16765746 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 70 4 73 75 112 84.0 2e-25 MDKAQLVEIANTEMPFGKYKGRRLIDVPEEYLLWFARKDQFPAGHLGELMALTLLIKTEG LSDLVQPLKKAR >gi|289777623|gb|GG745508.1| GENE 155 169120 - 170118 1218 332 aa, chain - ## HITS:1 COG:ECs3282 KEGG:ns NR:ns ## COG: ECs3282 COG0385 # Protein_GI_number: 15832536 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 529 88.0 1e-150 MKLFRILDPFTATLVTVVLLASFFPARGAFVPFFEHLTTAAIALLFFMHGAKLSREAIIA GGSHWRLHLWVMCSTFILFPVLGVLFAWWAPVNVDPMLYSGFIYLCILPATVQSAIAFTS LAGGNVAAAVCSASASSLLGIFVSPLLVGVLMNLHGAGGSLEQVGKIMLQLLLPFVLGHL SRPWIGNWVAKHKKWIGKTDQTSILLVVYSAFSEAVVNGIWHKVGLGSLLFIVVVSLVLL AIVIAVNVFVARRCGFNKADEITIVFCGSKKSLANGIPMANILFPTSILGIMVLPLMIFH QIQLMVCAVLARRYKQQTDARLAEEKANAAKA >gi|289777623|gb|GG745508.1| GENE 156 170207 - 171133 930 308 aa, chain + ## HITS:1 COG:STM2424 KEGG:ns NR:ns ## COG: STM2424 COG0583 # Protein_GI_number: 16765744 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 307 1 307 308 473 81.0 1e-133 MNYSLRQLKVFVTVARARSFSRAGEMIGLSQSAVSHSVKELEHQTGVRLLDRTTREVVLT EAGQQLAGRLERLLDELTITLRDAGRVGQQMSGTVKVAASQTISAHLIPQCIAHSNRRYP DIDFVLHDRPQQWVLESIRHGEVDFGIVIDPGPAADLQCEVVLAEPFLLLCREDHPFAGL TEVPWQALQDERLILQDYASGSRPLIDAALSRLAIRANIVQEIGHPATLFPMVESGIGIS VLPALALPLPQGSHLTVKRLTPVMERQLMLACRKNRSLSTAAQALWEIVREEGANLTAAR VEDPLYQR >gi|289777623|gb|GG745508.1| GENE 157 171875 - 173293 1767 472 aa, chain + ## HITS:1 COG:ECs3278 KEGG:ns NR:ns ## COG: ECs3278 COG0008 # Protein_GI_number: 15832532 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli O157:H7 # 1 470 1 470 471 946 95.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDG MNWLNLQWDEGPYYQTKRFDRYNNVIDEMLEAGTAYKCYCSKERLEALREEQMANGEKPR YDGRCRHSHEHHADDEPCVVRFANPQEGSVIFDDQIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVVDDWDMAITHVIRGEDHINNTPRQINILKALNAPVPVYAHVSMINGDDGKKLSK RHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIEFFSLGAVSKSASAFNT DKLLWLNHHYINTLPAEYVATHLQWHIEQENIDTRNGPQLAELVKLLGERCKTLKEIAQS CRYFYEEFAEFDADAAKKHLRPVARQPLEVVRDKLAAIGDWTAENVHHAIQATADELEVG MGKVGMPLRVAVTGAGQSPALDVTVHAIGKSRSVERINKALAFIAEREGQAS >gi|289777623|gb|GG745508.1| GENE 158 173346 - 173717 214 123 aa, chain - ## HITS:1 COG:no KEGG:KPK_1390 NR:ns ## KEGG: KPK_1390 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 123 8 130 130 237 100.0 9e-62 MTPAELADCLGLARQTINRWVRQQKWRTEAIPGVKGGRARLVVIDKPVLEFLTNAPARRH LFTDNHLAESPGAYLVNEADVVWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGIA SPA >gi|289777623|gb|GG745508.1| GENE 159 173742 - 174095 344 117 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1304 NR:ns ## KEGG: Kvar_1304 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 117 1 117 117 206 100.0 2e-52 MLKERMTPEEIAHLTGYSRQTINKWVRKEGWQTSPRPGVQGGKARLVHVNEQVREFIRSA QRVAETPGAYSTHDSDLESLLLTLSKELTPSEQKQLMSLLLREGITGLLLRLGIRDR >gi|289777623|gb|GG745508.1| GENE 160 174717 - 176888 1743 723 aa, chain + ## HITS:1 COG:STM2410_3 KEGG:ns NR:ns ## COG: STM2410_3 COG2200 # Protein_GI_number: 16765736 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 470 723 1 258 258 323 61.0 8e-88 MLDKININIKKTLLAFLVSLVAIPLARFISPQTVIDGNLIYIAWLPISVMFSVIFIFGRY AIAPLILAFAITNSFLIELTLSQALILLFCQLFAVFVSCAVLRLMVGKRWRCGPTAKHMG ARIFWGGFFAPVLLKITMYLAGQYFAFPLSITSYFGSMPLIYTVIDIQSLISAALIFTTF LYYPMRMIISPHYARRFWRQECLPWLAPKHRSFTLYWFISLALLLILLCAPYQSEFIAGY LVPVIFIVYFIGISRIGHALLRISWSVSAFLLVVYNKNFLQGVQSEYSLSFVLSVLISFT ICLFYMADTYARSDRNKRRWRSQAEEDPLTGLPNLRALVSHLQSSPLQAICSLRIDNLDF LSRHYGLMMGVDCKRQIIRALQPLLGATDKVFQVPGSELILVLDGPDPAARLNHMVAILN HKKFSWHNQPLDLEFGAAWSRDDGQGETLHQMLGQLSWLSEQAGSERRILALDEEQELVV DQTTEQVRLLMRVKQVLKERALVLYAQPIQNAEGEGYHEILTRMRCGDGVIMPDQFIPLI VQFNLSQRFDMLVLETLFSSLHQHPGQRFSVNLLPSTLMQKDSAAQIIALFQRYRISPDL ITIEVTEEQAFSNADTSQQNLDALRAFGCAIAIDDFGTGYANYERLKHLQADIIKIDGCF VRDILTDPLDAIMVKSIVEMARAKQMSVVAEYVESEPQKARLLELGVNYLQGYLVGKPQP LGE >gi|289777623|gb|GG745508.1| GENE 161 176936 - 178138 1760 400 aa, chain - ## HITS:1 COG:nupC KEGG:ns NR:ns ## COG: nupC COG1972 # Protein_GI_number: 16130325 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 400 1 400 400 636 94.0 0 MDRVLHFVLAIVVVAILALLVSHDRKKIRIRYVVQLLVIEVLLAWFFLNSDIGLGFVKGF SEMFEKLLGFANEGTNFVFGSMNDKGLAFFFLKVLCPIVFISALIGILQHIRILPIVIRA IGTVLSKINGMGKLESFNAVSSLILGQSENFIAYKDILGKMSRNRMYTMAATAMSTVSMS IVGAYMTMLQPKYVVAALVLNMFSTFIVLSLINPYRVEESEENLQMSNLHEGQSFFEMLG EYILAGFKVAIIVAAMLIGFIALISALNALFATVTGWFGYSISFQGILGYIFYPVAWVMG VPASEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISIFLVSFANFSSIGIIA GAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL >gi|289777623|gb|GG745508.1| GENE 162 178548 - 179726 1508 392 aa, chain + ## HITS:1 COG:STM2408 KEGG:ns NR:ns ## COG: STM2408 COG1914 # Protein_GI_number: 16765734 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Salmonella typhimurium LT2 # 1 392 22 413 413 607 88.0 1e-173 MGPAFVAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQVLSAKLGIATGKNL AEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLVLGVSLLQGAVLTGVATFL ILMLQRRGQKPLEKVIGGLLLFVAVAYVVELIFSQPALAPLTKGLVIPTLPNGEAVFLAA GVLGATIMPHVIYLHSSLTQHLHGGTRKERYNATRWDVAIAMTIAGFVNLAMMATAAAAF HFNGHTGVADLDQAYRTLEPLLSHAAATIFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFH IPLWFRRAVTMLPSFVVILLGLDPTRILVMSQVLLSFGIALALVPLLIFTSNAQLMGDLV NTRWVRVTGWVIVVIVVSLNGWLIVGSLLGVA >gi|289777623|gb|GG745508.1| GENE 163 179784 - 180137 181 117 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2925 NR:ns ## KEGG: Ent638_2925 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 101 1 99 115 131 84.0 8e-30 MFRSLILAAVLLAAAPLVANAGEITLLPSVKLQIGDRDNYGNYWDGGGWRDRDYWRRHYE WRDNRWHRHDNGWHRGWDKGKNKAWERGYRAGWSDRDDHRGGWGRGPGGRGHGHGHH >gi|289777623|gb|GG745508.1| GENE 164 180268 - 181224 1041 318 aa, chain - ## HITS:1 COG:STM2406 KEGG:ns NR:ns ## COG: STM2406 COG0667 # Protein_GI_number: 16765732 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Salmonella typhimurium LT2 # 1 316 13 328 332 537 80.0 1e-153 MEYRRCGRSGLQLPAISLGLWHNFGDETRVEISRQMLLHAFDLGITHFDLANNYGPPPGS AESNFGRILKEALQPYRDELIISTKAGYTMWDGPYGDWGSRKYLVASLNQSLQRMGLEYV DIFYHHRPDPQTPLTETMRALDHLVRQGKALYVGISNYPLAQAQEAVKILNDLGTPCVIH QPRYSMFERSAEDGLLDFLQTEGVGSIAFSPLAGGQLTDRYLNGIPADSRAASSSRFLQP EQLTAARLEKIRQLNTIAEERGQKLSQMALAWVLREEKVTSVLIGASKTAQLDDAVGMLQ NRHFSTEECAAIDAILAL >gi|289777623|gb|GG745508.1| GENE 165 181441 - 183102 1671 553 aa, chain + ## HITS:1 COG:STM2405 KEGG:ns NR:ns ## COG: STM2405 COG3961 # Protein_GI_number: 16765731 # Func_class: G Carbohydrate transport and metabolism; H Coenzyme transport and metabolism; R General function prediction only # Function: Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes # Organism: Salmonella typhimurium LT2 # 1 550 1 548 550 689 63.0 0 MQPTYTIGDYLLDRLVDSGIDRLFGVPGDYNLQFLDRVIAHSALGWVGCANELNAAYAAD GYARIKGAGALLTTYGVGELSALNGIAGSYAEHIPVLHIVGAPSTGAQQRGELLHHTLGD GDFRHFARMSEQITCSQALLTAGNACHEIDRVLRDMLTHHRPGYLMLPADVARAAAIAPA QGLLVEPAPADENQLAGFREHASRLLRGSRRISLLADFLAQRYGLQNTLREWVAKTPIAH ATMLMGKGLFDEQLSGFVGTYSGIASAPQTREAIENADTIICIGTRFTDTITAGFTQHLA REKTIEIQPFAVRVGDHWFSGVPMDQALAALMTLSAPLAAEWAAPQVMAPEVEEEGEGEL TQKNFWSTVQDALRPGDIILADQGTAAFGIAALKLPSEASLIVQPLWGSIGFTLPAAYGA QTAAAERRVVLIVGDGAAQLTIQEMGSMLRDKQKPLILLLNNEGYTVERAIHGPEQRYND IALWDWQRLPEAFAPDVVSRCWRVTHTAELREAMAESITSDTLTLVEVMLPKMDIPDFLR AVTQALEERNSRV >gi|289777623|gb|GG745508.1| GENE 166 183099 - 184334 1623 411 aa, chain - ## HITS:1 COG:STM2404 KEGG:ns NR:ns ## COG: STM2404 COG0038 # Protein_GI_number: 16765730 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 1 408 1 408 411 506 78.0 1e-143 MLHPRARTMLILSVPAILIGIACSLLLIGAMKVAALLQRVLWSNLPTQLGISADSPLWII AMLTATGIAVGLIVRYSPGHAGPDPATESLIGAPIATGALPGLLAALILGLAGGVSLGPE HPIMVVNIALAVAVGSRLFPRVSSLDWTILAASGTIGALFGTPVAAALIFSQTLNSSNES PLWDRLFAPLLAAAAGALTTGLFFHPHFTLPIPHYGQMYFVDIISGMIVALIAIAVGMVA VWCLPRLHALMHRLRNPILTLGIGGLLLGILGTIGGPLTLFKGLDEMQQLAFSQTLTAAD FLLIALVKLAALVLASASGFRGGRIFPAVFVGVALGLMLHAHVDAVPAAITVSCAILGMV LVVTRDGWLSLFMAAVVVPDTTLLPLLCIVMLPAWLLLAGRPLMIAKRTGD >gi|289777623|gb|GG745508.1| GENE 167 184598 - 185563 1189 321 aa, chain + ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 603 89.0 1e-172 MTKFALVGDVGGTNARLALCDLASGEISRAKTYSGLDYPSLEAVVRVYLEEHQVTVNEGC IAIACPITGDWVAMTNHTWAFSISEMKRNLGFAHLEIINDFTAVSMAIPMLKAEHLIQFG GSAPVAGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEGIILEELRAE LGHVSAERVLSGPGLVNLYRAIVKSDGRLPENLQPREVTERALADSCTDCRRALSLFCVI MGRFGGNLALTLGTFGGVYIAGGIVPRFLEFFKASGFRGGFEDKGRFKAYVQDIPVYLIV HENPGLLGSGAHLRQTLGQVL >gi|289777623|gb|GG745508.1| GENE 168 185616 - 186353 796 245 aa, chain - ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 245 1 244 244 429 87.0 1e-120 MKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLD GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKLTAAWQ QQNNVAAGATSAAPRENDTINLIKDERIIVTSIHDIYYAEAHEKMTFVYTRRESFVMPMN ITEFCSKLPTAHFFRCHRSYCVNLSKIREIEPWFNNTYVLRLRDLEFQVPVSRSKVKEFR QLMNL >gi|289777623|gb|GG745508.1| GENE 169 186365 - 188044 1877 559 aa, chain - ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 558 7 564 565 999 87.0 0 MMLAVYDRAALMLICLFFLIRLRLFRELLHKSAHTPKELLAVTAIFSLFALFSTWSGVPV EGSLVNVRIIAVMSGGILFGPWVGAIVGVIAGVHRYLIDIDGVTAVPCFITSIVAGLLSG LINRKVARDQRWKIGILAGMVCETLTMILVVVWAPSLSLGLDIVSKIGIPMILGSVCIGF IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSDSLRQVCEIIRRDITADAVAI TNTEHVLAYVGVGEANYQHHDDVISPTTRQAIRYGKIIIKNNDEAHRTPEIHSLMVIPLW EKGVVTGTLKIYYCHAHRITSTLQEMAIGLSQIISTQLEVSRAEQLREMANKAELRALQS KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKRELYQIKDY IAIEQARFGDKLTVIYDIDDDVSCVIPSLLIQPLVENAIVHGIQPCKGKGVVTIGINECG NRVRISVRDTGNGIDPAVVARVEADEMPGNKIGLLNVHHRVKLLYGEGLHIRTLTPGTEI AFYVPNHHTPQALTESLLS >gi|289777623|gb|GG745508.1| GENE 170 188446 - 189660 1381 404 aa, chain + ## HITS:1 COG:yfdZ KEGG:ns NR:ns ## COG: yfdZ COG0436 # Protein_GI_number: 16130311 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 404 1 404 412 807 96.0 0 MAESSPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCT VAQRPDTHGYSTSRGIPRLRRAISRWYEERYNVDIDPESEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP SNPTAQCVELDFFEKVVALAKQYDILVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF TLSKSYNMAGWRIGFMVGNKTLVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVREIA EQYKRRRDVLVKGLHEAGWMVECPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP GIGFGDYGDTHVRFALIENRDRTRQAIRGIKAMFRADGLLPAAS >gi|289777623|gb|GG745508.1| GENE 171 190141 - 191328 1085 395 aa, chain - ## HITS:1 COG:cynX KEGG:ns NR:ns ## COG: cynX COG2807 # Protein_GI_number: 16128326 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli K12 # 8 391 2 384 384 410 67.0 1e-114 MLRQNLTLCVLVLIGINMRPLLTSIGPLLPDIRAASGMSYTLVALLTALPVIAMGVLALG GGWVDRTVGQNRSIALSLLIIAAGALLRESAPHSGLLLSSALAGGIGIGIIQAAIPAVIK RLFARRTPLVMGLWSAALMGGGGLGAAFTPWLASRSTVWHQALAWWALPALLALLGWLAI CRQLPRAPHQTSASPRVAIIGQRRAWTLGLYFGLINAGYASLIAWLPPYYIQLGDSAQYS GSLLALLTVGQTAGALLLPALARQDDRRQLLLFALALQLIGFCGFIWLPQHVPALWAIAC GMGLGGAFPLCLVLALDHAGQPAVAGRLVAFMQGIGFIIAGLSPWLSGLLRSLSGNYTLD WSWHALCVLLLMALTLRFIPAHYPAEWRPRASDQH >gi|289777623|gb|GG745508.1| GENE 172 191334 - 191792 332 152 aa, chain - ## HITS:1 COG:PA2499 KEGG:ns NR:ns ## COG: PA2499 COG0590 # Protein_GI_number: 15597695 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Pseudomonas aeruginosa # 3 151 2 150 151 144 47.0 4e-35 MSADDRYLQRALALAKQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR ELAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDGEPFQLSTTAIYQQ LQQPLSRQTLPIHHCPQPEGPALYQRWAEQQP >gi|289777623|gb|GG745508.1| GENE 173 191925 - 192866 983 313 aa, chain + ## HITS:1 COG:cynR KEGG:ns NR:ns ## COG: cynR COG0583 # Protein_GI_number: 16128323 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 286 1 286 299 320 61.0 2e-87 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYMLGPLVEAYYRRYPGV KLLIQEMNQERMETMLLEDELDVGIAFGESLSRDIVVQPLLTETLALVVSRAHPLAHESH LQLQALDAQPLILLSSEFATREQINRYCRRHRLEPDVRMEANSIGAVLTVIRGTPLATLL PAAIAGQYDDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIAVTLEQENGQA LYEDLRHLPTSLD >gi|289777623|gb|GG745508.1| GENE 174 192863 - 193675 610 270 aa, chain - ## HITS:1 COG:no KEGG:KPK_1407 NR:ns ## KEGG: KPK_1407 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 270 53 322 322 525 99.0 1e-148 MEYCSLARAQKLLNCELEDILHWHDIGAINLCLKLNPTRGTLKIAVLSHQEKDVTTALNP LASAEEVETFWSPHSHIRSILRLDGDIPMVETLRGNTVTQFNVKVSASGLWHPHSRNLMA LLEAPDDILYENRLSMMLPDKPFVYCHFIPDEDEYSAISLNRIYITNQAIEKIYAHSISA RPMDVTKNSLLEQTSYIHQELTVLPQNEVLLEFIHYLIQSHTVFNEKLQNMAEPDKTQLF HHVLERLKEEGMLRENTLPDEADILSEADR >gi|289777623|gb|GG745508.1| GENE 175 194099 - 194581 412 160 aa, chain - ## HITS:1 COG:no KEGG:KPK_1409 NR:ns ## KEGG: KPK_1409 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 160 1 160 160 314 100.0 6e-85 MKQITLSDMQQQSEAAASAPRLRAHRNFHPELSDPVQRLAIAMEPGTYIRPHRHRHTFEL LLPLKGRFVVLNFDDNGVVTRRVVLGETCTALEMEAGTWHTVLSLDPGGMVFEVKQGAYQ PLAEVDTMAWAPAEGQPGTAEMMAWYAIAQPGDRFLSTPQ >gi|289777623|gb|GG745508.1| GENE 176 194995 - 195924 907 309 aa, chain - ## HITS:1 COG:STM2393 KEGG:ns NR:ns ## COG: STM2393 COG2116 # Protein_GI_number: 16765720 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Salmonella typhimurium LT2 # 1 309 1 309 313 510 81.0 1e-144 MDELDNNKLKPADDEREVESEEKQRGEEIEVDEDRLPSRAMAIHEHIRQEGEKEMERDAL ALLWSAIAAGLSMGASLLAKGIFHVKLEGIPGGFLLENLGYTFGFIIVIMARQQLFTENT VTAVLPVMHNPTPGNIGLLMRLWSVVLAGNLIGTAVAAWAFNFMPVFDEPTRQAFVSIAE DVMKNSPTEMFANAIISGWLVATMVWMFPVAGAAKIVVIILMTWLIALADTTHIVVGSVE ILYLVFNGSLPWSDFIWPFALPTLAGNICGGTFIFALLSHAQIRNDMSSKRKAEARAQAA EKAKNADRA >gi|289777623|gb|GG745508.1| GENE 177 196214 - 196975 952 253 aa, chain + ## HITS:1 COG:ECs3229 KEGG:ns NR:ns ## COG: ECs3229 COG2853 # Protein_GI_number: 15832483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Escherichia coli O157:H7 # 1 253 1 251 251 465 88.0 1e-131 MNYRLSALALGATLLVGCASSSSGDQPQGRSDPLEGFNRTMFNFNFNVVDPYVLRPVAVA WRDYVPQPARNGLSNFTSNLEEPAVMVNSFLQGDPYKGMVHFTRFFLNTILGMGGLIDVA GMANPQLQRVEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDEGGDMADGLYPVLSWLTW PMSIGKWAVEGIETRAQLLDSDGLLRQSSDPYILVREAYFQRHDFIANGGKLTPADNPNA QAIQDELKDIDSQ >gi|289777623|gb|GG745508.1| GENE 178 197037 - 198359 1648 440 aa, chain - ## HITS:1 COG:STM2391 KEGG:ns NR:ns ## COG: STM2391 COG2067 # Protein_GI_number: 16765718 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Salmonella typhimurium LT2 # 1 440 3 437 437 673 80.0 0 MSQKTRFTQSALAVAVALVSTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNASRNPA LIMMFDRPTMSAGAVFVDPGVNVSGTSPTGKSLNADNIAPTAWVPNFHFVAPINDQFGWG ASITSNYGLATEYNDDYAAGSMGGKTDLTTANFNLSGAYRLDSNWSFGLGFDAVYAKAKI ERYAGDLGQIVAGSGALPPALAGQVAKIPADTQIAHLNGNAWGFGWNAGILYELDKNNRY GFTYRSEVKIDFDGNYRSSLPAAYNQILGNFGLPAGTNGQTTGGSLTLNLPEMWELSGYN RVAPQWAVHYSLTYTSWSQFQELKATGSNGQTLFYKEEGFKDAYRLALGTTYYYDDNWTF RTGIAFDDSPVPANNRSISIPDQDRLWLSAGTTYAFNKDASVDVGLSYMHGQHVEIKEGP YTFRSEGTAWLYGANFNYRF >gi|289777623|gb|GG745508.1| GENE 179 198733 - 199017 394 94 aa, chain + ## HITS:1 COG:yfcZ KEGG:ns NR:ns ## COG: yfcZ COG3691 # Protein_GI_number: 16130276 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 94 9 102 102 140 81.0 4e-34 MSKCSADETPVCCCMDVGTIVDNTDCTASYSRVFANRAEAEQMLAALSEKACNVQSEPCK INPAFTDVDGGVQLDIDFIFSCEAESLIFQLGLR >gi|289777623|gb|GG745508.1| GENE 180 199175 - 200485 1400 436 aa, chain + ## HITS:1 COG:yfcY KEGG:ns NR:ns ## COG: yfcY COG0183 # Protein_GI_number: 16130275 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 436 1 436 436 721 89.0 0 MSQALPLITRQGDRIAIVRGLRTPFARQATVFHGVPAVDLGKMVVGEMLARSDIPADVIE QLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRA GIAGGADSSSVLPIGVSKTLARTLVDANKARTLSQKLKLFSRLRPRDLLPVPPAVAEYST GLRMGDTAEQMAKSWGITREQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREPLEQ DNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLTPLGY LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLTLIDMHEAFAAQTLANLQCLASE RFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT ACAAGGLGAAMIVEAE >gi|289777623|gb|GG745508.1| GENE 181 200485 - 202629 2041 714 aa, chain + ## HITS:1 COG:STM2388_2 KEGG:ns NR:ns ## COG: STM2388_2 COG1250 # Protein_GI_number: 16765715 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Salmonella typhimurium LT2 # 324 711 17 403 408 629 78.0 1e-180 MDAVSAFKLEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRRVRDDKSVRGVVFISA KADNFIAGADINMIARCRSAQEAEALARQGQQIMAEIHGLSIPVIAAIHGACLGGGLELA LACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQAL KAGLVDEVVPQAILLQAAVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKT QGNYPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKKDRG AEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV RQRRLRPSERDRQMALISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQTIF ASNTSSLPIGDIAAHASRPEQVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAKRQ GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDEVG IDTGTKIIPVLESAFGERFSPPANIIDVILKDDRKGRKNNRGFYLYETKGRKSKKRPDPA VYPLLGIDRPQSRLSAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPFL GGPFRYMDTIGAGEVAAILQRLAAQYGPRFTPCDTLLRMAEQGTTFWPADERLT >gi|289777623|gb|GG745508.1| GENE 182 202854 - 203324 464 156 aa, chain + ## HITS:1 COG:STM2387 KEGG:ns NR:ns ## COG: STM2387 COG2062 # Protein_GI_number: 16765714 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Salmonella typhimurium LT2 # 1 156 6 161 161 268 85.0 4e-72 MRHGDAALDAASDSVRPLTVCGCDESRQMATWLKGQKVDIERVLVSPYLRAEQTLDIVGE CMNLPKHVDVMPELTPCGDVGLVSAYLQALANEGVATALVVSHLPLVGYLVSELCPGETP PMFTTSAIACVTLDADGKGEYLWQKSPCNLKMANAI >gi|289777623|gb|GG745508.1| GENE 183 203343 - 203894 690 183 aa, chain - ## HITS:1 COG:STM2386 KEGG:ns NR:ns ## COG: STM2386 COG2840 # Protein_GI_number: 16765713 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 325 91.0 3e-89 MKKKTSLSEEDQALFRQLMTGTRKIKQDTIVHRPQRKKVTEVAPKRLLQEQADNSHYFSD EFQPLLNTEGSTKYVRADVSHFELKKLRRGDYSPELFLDLHGLTQQQAKQELGALIAACR REHVFCACVMHGHGKHILKQQTPLWLAQHPHIMAFHQAPKEYGGDAALLVLIEVEEWQPP ELP >gi|289777623|gb|GG745508.1| GENE 184 203990 - 204994 1523 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. W3110] # 25 334 1 310 310 591 91 1e-167 MLIYRRLHGTLAAEFIAECALEVVVDKIFVDEAVNELHTIQDMLRWAVSRFSAANIWYGH GTDNPWDEAVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNK AWFCGHEFYVDERVLVPRSPIGELINNQFAGLINHKPQHILDMCTGSGCIAIACAYAFPE AEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFRDLPKLQYDLIVTNPPYVDEEDM ADLPEEYEHEPVLGLASGSDGLKLTRRILGNAPDYLSDDGILICEVGNSMVHLMEQYPDV PFTWLEFDNGGDGVFMLTKQQLIDARAHFGIYKD >gi|289777623|gb|GG745508.1| GENE 185 205036 - 206121 1410 361 aa, chain + ## HITS:1 COG:ECs3213 KEGG:ns NR:ns ## COG: ECs3213 COG0082 # Protein_GI_number: 15832467 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 660 94.0 0 MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYGAIKDLFRPGHADYTYEQKYGLRDY RGGGRSSARETAMRVAAGAIAKKYLAAKFGIVIRGCLTQMGDIPLAIKDWDQVEQNPFFC PDPDKIDALDELMRGLKKEGDSIGAKVTVVADGVPPGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFEVVKLRGSENRDEITKDGFQSNHAGGILGGISSGQQIVANIALKPTSSITV PGHTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHFMRQRAQNGDVTTTIPR W >gi|289777623|gb|GG745508.1| GENE 186 206124 - 206948 675 274 aa, chain + ## HITS:1 COG:STM2383 KEGG:ns NR:ns ## COG: STM2383 COG3770 # Protein_GI_number: 16765710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Salmonella typhimurium LT2 # 1 274 1 274 274 452 81.0 1e-127 MKNTVIALLALLASAGSLAATPWQKISQPIGGSAQSIGAFSNGCIVGAEALPLSATGYQV MRTDQRRYFGHPDLVQFIQRLSNQVHNKGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD IFLQLPQTRWTSSQLLKPQALDLVASDGKHVVPSLWSPQISQLIKLAAEDSEVTRIFVNP AIKQQLCLDAGSDRQWLRKVRPWFQHRAHMHVRLRCPAGSLECEDQAPPPPGDGCGAELQ SWFEPPKPGSTPPVKKTPPPLPPSCQALLDEHVL >gi|289777623|gb|GG745508.1| GENE 187 206948 - 207757 802 269 aa, chain + ## HITS:1 COG:STM2382 KEGG:ns NR:ns ## COG: STM2382 COG0730 # Protein_GI_number: 16765709 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 269 1 269 269 406 85.0 1e-113 MDSFIELFAVSPLVLVVLFFVAILAGFIDSLAGGGGLLTVPALMAAGMPPAQALATNKLQ ACGGSLSATLYFVRRKVVSLADQKLNILMTFIGSTAGALLVQHVQSDILKQILPLLVIGI GLYFLLMPKLGEADRQRRLYGLPFALVAGGSVGFYDGFFGPGAGSFYALAFVTLAGFNLA KSTAHAKLLNATSNVGGLLLFIIGGKVIWATGFVMMAGQFIGARAGSRLVLSKGQSLIRP MIVIVSAVMSAKLLYDSHGAEILQWLGIH >gi|289777623|gb|GG745508.1| GENE 188 207757 - 208305 489 182 aa, chain + ## HITS:1 COG:STM2381 KEGG:ns NR:ns ## COG: STM2381 COG3101 # Protein_GI_number: 16765708 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 182 1 182 182 320 81.0 7e-88 MQQQHHYQQLIDLFDSCFAEEFNTRLVKGDDEPIYLPADDDTPYHRIVFAHGFFASALHE ISHWCVAGKARRERVDFGYWYCPDGRDAMTQSQFEEVEVKPQAYEWLFCVAAGFPFNVSC DNLEGDVEPDRIAFQRRVHARVMTLLEQGIPERPARFIRALQHYYQTPTLTAEHFPWPED LH >gi|289777623|gb|GG745508.1| GENE 189 208337 - 208618 438 93 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1334 NR:ns ## KEGG: Kvar_1334 # Name: not_defined # Def: YfcL protein # Organism: K.variicola # Pathway: not_defined # 1 93 1 93 93 163 100.0 2e-39 MIAEFESRILALIDNMVDHASDDELFAGGYLRGHLTLAVAELEGEGEHSAEAVNSKVSQS LEKAISAGELSPPDQILVQGMWHNLYQQAKNQA >gi|289777623|gb|GG745508.1| GENE 190 208680 - 210668 1650 662 aa, chain - ## HITS:1 COG:yfcK_2 KEGG:ns NR:ns ## COG: yfcK_2 COG0665 # Protein_GI_number: 16130259 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 256 662 1 411 413 602 72.0 1e-172 MKQNAIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLPERFASHPRPLM IVAESGFGTGLNFLTLWQAFDVFVRDNPDVTLQRLHFISFEKYPLKAEDLRLAHQRWPEL APWAHQLQAQWPSAFGGCHRLLLDGGRVTLDLWFGDINELTRELDDSLNQQVDAWFLDGF APAKNPDMWTQDLFNAMARLARPGGTLATFTSAGFVRRGLQEAGFTMRKSKGFGRKREML TGEMAQTLSFPARVPWFARSSSDAREVAIIGGGIASALLSLALLRRGWQVTLYCADDAPA QGASGNRQGALYPLLSQHDPALARFFPAAFTFARRMYDALPVMFDHQWCGVTQLGWDEKS AHKIAQMLALNLPPDIACAVTAEQVVGLTGVDTGCGGITYPAGGWLCPQQLTAELLALAA TRGLHVHYGYHVETLSAEGDGWLLNQQRNHQAVVLANGHSIADFAQTAQLPVYPVGGQVS HIPTTPRLSALRQVLCYDGYLTPHNPQNQQHCIGASYHRGKTDTTFSEEDQQHNRQRLID CFPNAEWTLDVDISANAARCGVRCATRDHLPMVGNVPDYEATLTQYASLHEQLDHAGRAP VCRNLFMLGALGSRGLCTAPLSAELLAAQMSGEPLPLDSDTLAALNPNRLWVRKLLKGKA VK >gi|289777623|gb|GG745508.1| GENE 191 210827 - 212047 1224 406 aa, chain + ## HITS:1 COG:ECs3207 KEGG:ns NR:ns ## COG: ECs3207 COG0304 # Protein_GI_number: 15832461 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 403 1 403 406 740 96.0 0 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLI DRKVVRFMSDASIYAYLSMEQAVADAGLAPEAYQSNPRVGLIAGSGGGSPKFQVFGADAM RSPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLG KQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDANRDGFVIAGGGGMVVV EELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGT STPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN VEELDEQAAGLNIVTKPTDAKLTTVMSNSFGFGGTNATLVMRKYNA >gi|289777623|gb|GG745508.1| GENE 192 212257 - 213438 1483 393 aa, chain + ## HITS:1 COG:STM2372 KEGG:ns NR:ns ## COG: STM2372 COG0477 # Protein_GI_number: 16765699 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 391 1 391 392 501 79.0 1e-141 MSAVTETTSHSSANFSLFRITFAVFLTYMTVGLPLPVIPLFVHQELGFGNTVVGVAVGIQ FLATVLTRGYAGRLADQYGAKRSVLQGMLACALAGAAWLAAALLPLPVLARLGLLLLGRL ILGFGESQLLTGNLSWGMGLVGPARSGKVMSWNGMAMYGSLAVGAPLGLLIYSHFGVAVL ACVTMGLPLVAWLINGTVRKVAAHGGERPSLWSVIGMIWRPGIGLGLQGVGFAVIGTFVS LYFASHSWPMAGFTLTAFGGAFVVMRILFGWMPDRFGGVRVAMVSLLIEAVGLTLLGLAP NAWLALAGAALTGCGCSLIFPSLGVEVVKRVPAQVRGTALGGYAAFQDISYGLTGPLTGL LATSLGYSSVFLAGALCAALGILVTLVSFRRPG >gi|289777623|gb|GG745508.1| GENE 193 213440 - 214177 498 245 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 232 1 232 238 184 39.0 1e-46 MVYKNIVNLLKNKINSPFYNIGDLLPAEKELAELYDVSRNTLRKALKTLEEDGLIERRHG SGTWIRNKHFQASVTHLDSFTEIARNQGKTPSSQILKFELQPASEEIARGLQLQHGEAVY YAKRLRFIDNIAMQLEETWLSATRFPDLTIAHMKKSKFSYIENECGVRINGCYESIVPVL PTPELATLLHISAKDPIIRMQTQAIDEHHQPIDYSILYTNMFEFQVKYYLPRQTASGLPA SKTGQ >gi|289777623|gb|GG745508.1| GENE 194 214373 - 214687 266 104 aa, chain + ## HITS:1 COG:lin2905 KEGG:ns NR:ns ## COG: lin2905 COG1440 # Protein_GI_number: 16801964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 99 1 97 100 98 55.0 3e-21 MQNILLVCAAGMSTSMLVKRMQEQAENIKAQVNINALAISEAKEKIKNNEVDVVLLGPQV RFQKKEIEEVAQGKIPVAVIDMKYYGQMDGKAVLESALALLANQ >gi|289777623|gb|GG745508.1| GENE 195 214796 - 216142 1613 448 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 438 1 438 450 585 71.0 1e-167 MSFMDTFERGMEKILVPVAIKLNSQIHVSAIRDAFILSFPIVMASSLIILINFAILSPDG FIASILHLGTIFPHLAEAQQIFTPVMNGSVNIMAILITFLVARNMAISYQQDDLLCGLTA IGAFFVVYTPYTIIDGQAYLATKYLGPQGLFVAIIVALISSEVFCRLARNPRVTITMPAA VPPAVARSFKVLLPIFFVMIFFSILNYLLTRISPNGLNDLIYTLIQAPLKNMGTNIVTVL VLGLVANFLWVLGIHGPNTVAAIRETIFSEANLENLSYAASHGSTWGAPYPITWTGINDA FANCGGSGMTLGLLLAIFIASRRNDYRDLAKMAFVPGLFNINEPVMFGLPIVLNPILVIP FILVPFVNSLIGYFFISMEFIPPIAYAVPWTTPGPLIAFFGTGGNWLALFVGILCLAVST LIYLPFVIAANKVNTAAATDQEDGDVCR >gi|289777623|gb|GG745508.1| GENE 196 216129 - 216440 198 103 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 100 16 113 115 76 50.0 1e-14 MFADESTVMELLICAGQARSDAMEAIAASRQREWGRAADLMASSEAACRAAHKIQTALIG QDEGCGKITVNLILVHAQDHLMTAMLCQDLAKEIIALRQERSA >gi|289777623|gb|GG745508.1| GENE 197 216501 - 218174 1735 557 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 557 1 538 538 541 50.0 1e-153 MYSSQLKVSLLSLSVLLAISTSDVMAAKLTIEQRLELLESELSANKKELQKTQSQLSTYK GRVAELQKSIKENEKRHVTTGYPTATSPVAENIANENNELSKKAAPVQVKATQQVAVIDT EGQKPKLESVTLKDISKFVKDDIGFSYQGYFRSGWGTSNHGSSQTYAPGSLGRFGNEMSG WFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFAGQDTDSILQFSDIYLTTKGFLP FAPEADFWVGKHKLPEYEIQMLDWKSLTTDVAAGVGIQNWALGVGQLDASVSRNDVDVYS RDFTQTTQMNTNSVDLRYRNIPLWQSGSLSLMGKYAFANKNDEQERNEDNNSYFRFKDTW MATAIIRQELERKGFNEFTLQVANNSYASSFANFSGASNSMASGRYYYGDHTNGVAWRLI SQGEMYLADRIIMANSLVWAHGNDVYSYESGAHSDFDSLRAVIRPAWIWDTWNQTGVELG WFTQKNNTRQGDDLQESAYKTTLYHALKVGPSLLGSRPEIRFYGTYINILDNQLSQFAFN DDSKDEFMVGVQAEVWW >gi|289777623|gb|GG745508.1| GENE 198 218233 - 219213 796 326 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1343 NR:ns ## KEGG: Kvar_1343 # Name: not_defined # Def: flagella biosynthesis regulator protein # Organism: K.variicola # Pathway: not_defined # 1 309 1 309 326 533 100.0 1e-150 MTHPLADMPDRPPGRGPSGTAATGEPSLSMQQRTVLERLITRLVALTSQQNAEVWACVKH DLGLKGDTPLLACHFSAAEASLNQRLAAAQDNHHHRQTLAQLSDLLGQGNNRQAVSDYIR QHYGQTALHALSQPQLENILHLLQRGQLSIPQPQQRPPTLRPLLPAEHNTLNQLVTKLAA ATGEPSKLIWQSMLELCGVKSGELIPATHFTPLSYWLQARQTLSAQSAPTLTSLQGALKQ PLEAAEWQKIVDFARRSWQVTPQTTLSPAQILALLNKVFVLRVARAQETLAIPQEEPAPT RAWAAKPWSLALGGVLILLLLLWLLL >gi|289777623|gb|GG745508.1| GENE 199 219324 - 220460 1208 378 aa, chain + ## HITS:1 COG:STM2370 KEGG:ns NR:ns ## COG: STM2370 COG0111 # Protein_GI_number: 16765697 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 376 1 376 378 661 86.0 0 MKILVDENMPYARELFSRLGDVQAVPGRPVPAEALTDADALMVRSVTRVNEALLSGKAVK FVGTATAGTDHVDQAWLQQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFALRDRTVG IVGVGNVGGRLQKRLEALGIKTLLCDPPRADRGDEGDFRSLDALVQEADVLTFHTPLYKE GPYKTQHLADESLISRLKPGTILINACRGPVVDNAALLKRLEAGQPLSVVLDVWEPEPDL NVELLKRVDIGTAHIAGYTLEGKARGTTQVFEAYSAFIGHPQQVALDTLLPAPEFGRITL HGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGVAGEFDKLRKNYQERREWSSLYVQCSDAQ AATLLRQLGFNAVHHPVR >gi|289777623|gb|GG745508.1| GENE 200 220524 - 221537 1430 337 aa, chain + ## HITS:1 COG:STM2369 KEGG:ns NR:ns ## COG: STM2369 COG0136 # Protein_GI_number: 16765696 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 337 1 337 337 595 89.0 1e-170 MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIFALARNESAGEHLRFGGKSVIVKDAA EFDWTQAQLAFFAAGAEASAAYIEDATNAGCLVIDLSGLFALEPDVPLVVPDVNPFVLGD YRNRNLIAVPNSLTSQLLTALKPLIDQGGLSRISVTNLLSASGQGKKAVDALAGQSAKLL NGIPIDEDDFFGRQLAFNMLPLLPDREGSVREERRIVDEARKILQDDGLMISANVVQSPV FYGHAQMVNFEAMRPLAAEEARDAFTRGEDIELSEEGEFPTQVGDASGNARLSIGCVHND YGMPEQIQFWSVADNVRFGGALMAVKIAEKLIEEYLY >gi|289777623|gb|GG745508.1| GENE 201 221537 - 222349 678 270 aa, chain + ## HITS:1 COG:ECs3202 KEGG:ns NR:ns ## COG: ECs3202 COG0101 # Protein_GI_number: 15832456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 508 91.0 1e-144 MSEMEQQPIFKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD AGVHGTGQVVHFETRAQRKDAAWTLGVNANLPGDIAVRWVKHVPADFHARFSATARRYRY VIYNHRLRPAVLSHGVTHFHQPLDAERMQRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH INVTRYGAYVVVDIKANAFVHHMVRNIVGSLMEVGAGNQPESWMAELLAAKDRTLAAATA KAEGLYLVSVDYPAHYDLPVLPMGPLFLAD >gi|289777623|gb|GG745508.1| GENE 202 222376 - 223035 907 219 aa, chain + ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 366 89.0 1e-101 MDLIHFLIDFILHIDVHLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LSALPTNDLNVHLMVLLMVIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHSF YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVVGALLWVLLFTYAGYLFGD LPVVQENLKLLIVAIIVLSVLPGVIEIIRHKRAASKQAK >gi|289777623|gb|GG745508.1| GENE 203 223222 - 224142 1053 306 aa, chain + ## HITS:1 COG:ECs3200 KEGG:ns NR:ns ## COG: ECs3200 COG0777 # Protein_GI_number: 15832454 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Escherichia coli O157:H7 # 1 306 1 304 304 565 97.0 1e-161 MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARNR LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYAMPV VAAAFEFSFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKT SAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPVAVSEAPHEGVVVPPAP DQEPEA >gi|289777623|gb|GG745508.1| GENE 204 224218 - 225486 1345 422 aa, chain + ## HITS:1 COG:ECs3199 KEGG:ns NR:ns ## COG: ECs3199 COG0285 # Protein_GI_number: 15832453 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Escherichia coli O157:H7 # 7 422 7 422 422 655 81.0 0 MEKDPIPQATSPLATWLSYLEHLHSKTIDLGLARVSEVAGQMDIVKPAPFVFTVAGTNGK GTTCRTLETVLMAAGYKVGVYSSPHLVRYTERVRIQGAELPEAAHTASFAEIEAARGDIS LTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPD RESIGREKAGIFRAGKPAVVGEPDMPHTIADVASEKGALLQRRGVDWCYEVEDETWSFRD AAGALSRLPLPQVPLPNAATAVAALRASGLAVDDAILRDGIRDAMLPGRFQIISDAPRVI LDVAHNPHAAAYLAGRLKTLAKTGRVLAVIGMLHDKDIAGTLANLAPDVDAWYCAPLEGP RGATAEQLVEHLRGGTVYTSVAQAWHAAMADAKVEDTVLVCGSFHTVAQVMEEIDAGRIG GE >gi|289777623|gb|GG745508.1| GENE 205 225476 - 226171 720 231 aa, chain + ## HITS:1 COG:ZdedD KEGG:ns NR:ns ## COG: ZdedD COG3147 # Protein_GI_number: 15802861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 231 1 220 220 256 73.0 2e-68 MASKFQNRLVGTIVLVALGVIILPGLLDGQKKHYQDEFAAIPLVPKPGDRDEPDMLPAAT QALPSQPPEGAAEEVRAGDAAAPSLDPSRIPVNSNSFDDVQEPVVAAKPQPKPQPKPQPQ PQQQAATPTPPPAKPQQQQPPQQQAALPAPTGKAYVVQLGALKNADKVNEIVGKLRASGF KVYTSPSTPVQGKITRILVGPDASKDKLKGQLGDLQQISGLSGVVMGFTPN >gi|289777623|gb|GG745508.1| GENE 206 226388 - 226876 441 162 aa, chain + ## HITS:1 COG:STM2363 KEGG:ns NR:ns ## COG: STM2363 COG1286 # Protein_GI_number: 16765690 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Salmonella typhimurium LT2 # 1 161 1 161 162 248 84.0 3e-66 MVWIDYAIMAVLGLSCLVSLIRGFVREALSLVTWGCAFYVASHYYADLSVWFTGFEDERV RNGIAIAALFIVTLIVGAIVNYVIGQLVEKTGLSGTDRVLGICFGALRGVLIIAAILFFL DTFTGMAKSDDWHQSQFIPYFTPVIRWFFEYLQSSSSFLPKV >gi|289777623|gb|GG745508.1| GENE 207 226910 - 228427 1929 505 aa, chain + ## HITS:1 COG:STM2362 KEGG:ns NR:ns ## COG: STM2362 COG0034 # Protein_GI_number: 16765689 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Salmonella typhimurium LT2 # 1 505 1 505 505 1006 97.0 0 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARH MQRMQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR RHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMV AFRDPNGIRPLVLGKRDVGDGRTEYMVASESVALDTLGFEFLRDVAPGEAVYITEKGQLY TRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVI PIPETSCDIALEIARILDKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPTANELIAHG REVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTRDVDQQYLDYLD SLRNDDAKAVQLQNEVENLEMHNEG >gi|289777623|gb|GG745508.1| GENE 208 228562 - 229146 653 194 aa, chain + ## HITS:1 COG:ECs3195 KEGG:ns NR:ns ## COG: ECs3195 COG0163 # Protein_GI_number: 15832449 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 189 1 189 189 328 88.0 3e-90 MKRLIIGISGASGAIYGVRMLQVLRDVPEIETHLILSQAARQTLALETDFSVRDVQALAD VVHDARDIAASISSGSFKTAGMVILPCSMKTLSGIVHSYTDGLLTRAADVVLKERRPLVL CVRETPFHLGHLRLLVQAAELGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFDISLSQ DLFTRWQGAQDCTK >gi|289777623|gb|GG745508.1| GENE 209 229419 - 230201 1086 260 aa, chain + ## HITS:1 COG:STM2355 KEGG:ns NR:ns ## COG: STM2355 COG0834 # Protein_GI_number: 16765682 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 436 87.0 1e-122 MKKTILALSLLVGMSSTASVFAALPQSIRIGTDATYAPFSSKDAKGDFVGFDIDLGNELC SRIKVKCTWVGSDFDSLIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAAK GSPIQPTLEALKGKHVGVLQGSTQEAYANDRWRSQGVDVVAYQNQDLIYSDLAAGRLDAA LQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGIGLRKDDVELKAAFDKALGEIR KDGTYDKMAKKYFDFNVYGD >gi|289777623|gb|GG745508.1| GENE 210 230469 - 231251 1233 260 aa, chain + ## HITS:1 COG:STM2354 KEGG:ns NR:ns ## COG: STM2354 COG0834 # Protein_GI_number: 16765681 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 24 259 24 259 260 435 93.0 1e-122 MKKLALSLSLALALSSVSTVFAAIPQKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELC KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVKK GSPVTPDLATLKGKRVGVLQGTTQETYGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA FQDEVAASEGFLKQPIGKDYQFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR KDGTYDKLAKKYFDFNVYGE >gi|289777623|gb|GG745508.1| GENE 211 231316 - 232002 950 228 aa, chain + ## HITS:1 COG:STM2353 KEGG:ns NR:ns ## COG: STM2353 COG4215 # Protein_GI_number: 16765680 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 228 1 228 228 363 89.0 1e-100 MLYGFSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLSSNRPLALVFEGYTTLIRGVP DLVLMLLIFYGLQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVP KGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKAT QLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKRADL >gi|289777623|gb|GG745508.1| GENE 212 231999 - 232715 802 238 aa, chain + ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 410 93.0 1e-114 MIEIIQEYWKSLLWTDGYRFTGVAITLWLLISSVVMGGILAVFLAIGRVSSNKFIQFPIW LFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTELLNAFFRSGLNCTVLALTLNTCAYTTEI FAGAIRSVPAGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTA TVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKRWLQHIKPSSTH >gi|289777623|gb|GG745508.1| GENE 213 232723 - 233496 249 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 100 33 2e-19 MSDNKLNVIDLHKRYGEHEVLKGVSLQAKAGDVISIIGSSGSGKSTFLRCINFLEKPSEG TIVVSGQNIGLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLSKQEARDRAVKYLAKVGIDERQQAKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGHPDALF GAPKSPRLQQFLKGSLK >gi|289777623|gb|GG745508.1| GENE 214 233502 - 234029 543 175 aa, chain - ## HITS:1 COG:AGl237 KEGG:ns NR:ns ## COG: AGl237 COG1670 # Protein_GI_number: 15890229 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 169 9 183 186 68 30.0 6e-12 MTTITTPRLSLTRFVTDDWPFFLRLRQDPLVMRFMGEVLSETALRSVFASRCADPGVFVL RDKRGDALGDIGLRISPKNPHEADVGYALLPQAQGRGYASEALRAICDYGFSTLGVQAIN AWVLSENHGSSRLLEKQGFVRTQVLEKAYHLNGIDYDDWIYRLEREAHPTPTDAG >gi|289777623|gb|GG745508.1| GENE 215 234248 - 235141 681 297 aa, chain - ## HITS:1 COG:STM2350 KEGG:ns NR:ns ## COG: STM2350 COG1090 # Protein_GI_number: 16765677 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Salmonella typhimurium LT2 # 1 297 1 297 297 523 83.0 1e-148 MKILLTGGTGLIGRHLIPRLLELGHSVTVSTRHPDSARARLDPRVTLWRDFEGHHHLNDI DAVINLAGEPIADKRWTAEQKQRLCHSRWDLTQRLVGLIHASDTPPSVLISGSATGYYGD LGEVVVTEEEPPHNEFTHKLCARWEQIACEAQSERTRVCLLRTGVVLAPRGGILGKMTPA FKLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNDLRGPFNMVSPYPVHNEQFAHALGHA LNRPAIFRVPAAAIRLLMGESAVLVLGGQRALPKRLEAAGFAFRWYDLEEALKDVLR >gi|289777623|gb|GG745508.1| GENE 216 235160 - 235522 498 120 aa, chain - ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 1 120 1 120 120 193 86.0 7e-50 MSQPDAIIRIKNLRLRTFIGIKEEEIANRQDVVVNVAIHYPADKARDSEDINDALNYRTI TKRIISHLENGRFSLLEKLTQDVLNIACEHHWVTYAEVEIDKLHALRYADSVSMTMSWRR >gi|289777623|gb|GG745508.1| GENE 217 235588 - 236217 810 209 aa, chain - ## HITS:1 COG:STM2349 KEGG:ns NR:ns ## COG: STM2349 COG0625 # Protein_GI_number: 16765676 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 207 1 207 215 356 82.0 2e-98 MIDLYYAPTPNGHKITLFLEEAQLAYRLIRVDIGKGEQFHPQFLAISPNNKIPAIVDHMP VDGGAPLSVFESGAILLYLAEKSGKLLSGELRERYITLQWLFWQVGGLGPMLGQNQHFAH SAPQTVPYAIERFQVETQRLYGVLNHRLEASPWLGGDHYSIADIAAWPWVNSHVRQRIDL ANYPAVHNWYERIKQRPATIEAMLKIQPY >gi|289777623|gb|GG745508.1| GENE 218 236408 - 237052 742 214 aa, chain + ## HITS:1 COG:STM2348 KEGG:ns NR:ns ## COG: STM2348 COG0625 # Protein_GI_number: 16765675 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 214 1 214 214 315 74.0 5e-86 MSQPVITLWSDADFFSPYVMSVYVALQEKSLPFSLKTVDLNRGEHLQAGWTGYTATRRVP LLEVDDFALSESSAITEYLDERFAPPEWERIYPHDLQKRARARQIQAWLRSDLVPIREER STAVVFGGVKMPALSEAGKQSAEKLFTTAAMLLAHGGQNLFGEWSIADADLALMLNRLVL NGDEVPETLADYATFQWQRASIQRYVALSAKRAG >gi|289777623|gb|GG745508.1| GENE 219 237109 - 237660 485 183 aa, chain + ## HITS:1 COG:STM2347 KEGG:ns NR:ns ## COG: STM2347 COG0622 # Protein_GI_number: 16765674 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Salmonella typhimurium LT2 # 1 181 1 181 183 298 78.0 3e-81 MKLMFASDIHGSLPATERVLERFAQSGARWLIILGDVLNHGPRNALPEGYAPAEVAARLN SVAERIIAVRGNCDSEVDQMLLRFPMTAPWQQVLSERYRLFLTHGHLYSPENLPPLDAGD VLAYGHTHIPVAEKRGAIYLFNPGSVSIPKGGYSASYGLLDQGRLQVLALNDNQVIAEVA IYP >gi|289777623|gb|GG745508.1| GENE 220 237718 - 238263 619 181 aa, chain + ## HITS:1 COG:ECs3183 KEGG:ns NR:ns ## COG: ECs3183 COG0494 # Protein_GI_number: 15832437 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 3 181 2 180 180 298 89.0 3e-81 MAEQNHLASTEWVDIVNENNEVIAQSSREQMRAQCLRHRATYIVVHDGMGKILVQRRTET KDFHPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFADHGQFYYEDKFCRVWGSL FSCVSHGPFALQEEEVSEVCWLTPEEITARCDEFTPDSLKALALWMTRNAGNEYDDAEEG E >gi|289777623|gb|GG745508.1| GENE 221 238354 - 240501 2600 715 aa, chain - ## HITS:1 COG:pta_1 KEGG:ns NR:ns ## COG: pta_1 COG0857 # Protein_GI_number: 16130232 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Escherichia coli K12 # 1 391 1 391 391 717 94.0 0 MSRTIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRSGGDAPDQTTTIVRAS SSTTTAAEPLKMNHVESLLSSNQKDVLMEEIIANYHANTQDAEVVLVEGLVPTRKHQFAQ ALNFEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRNSFGGAKNTSITGVIVNKLNAPVD EQGRTRPDLSEIFDDSSKAKVVKIDPAQLQKGSTLPVLGAVPWSFDLIATRAIDMAHHLN ATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEI GAILLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEK VQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRVVLPEGDEPRTVKA AAICAERGIATCVLLGNPDEINRVAAAQGVELGAGIEIVDPEVVRESYVARLVELRKSKG MTEAVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSV FFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAIAFGIEPRVAMLSYSTGTSGAGS DVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTG NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQK >gi|289777623|gb|GG745508.1| GENE 222 240702 - 241904 1516 400 aa, chain - ## HITS:1 COG:STM2337 KEGG:ns NR:ns ## COG: STM2337 COG0282 # Protein_GI_number: 16765664 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 400 1 400 400 782 97.0 0 MSSKLVLVLNCGSSSLKFAILDAVNGDEYLSGLAECFHLPEARIKWKIDGGKQEAELGAG AAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFA PLHNPAHLIGIAEALKSFPHLKDKNVAVFDTAFHQTMPEESYLYALPYSLYKEHGVRRYG AHGTSHFYVTQEAAKILNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM GTRSGDIDPAIIFHLHDTLGMSVDAINKMLTKESGLLGLTEVTSDCRYVEDNYQEKADAK RAMDVYCHRLAKYIGSYTALMDGRLDAVIFTGGIGENAAMVRELSLGKLGVLGFEVDHER NLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLTA >gi|289777623|gb|GG745508.1| GENE 223 242243 - 242698 632 151 aa, chain + ## HITS:1 COG:STM2336 KEGG:ns NR:ns ## COG: STM2336 COG3092 # Protein_GI_number: 16765663 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 151 1 151 151 277 91.0 6e-75 MSTPEKRPVSFFSLFNRGQHYAKTWPLDKRLAPVFIENRIIRATRYAIRIMPPIAIFTLC WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQAL APVEGKPDYQALADTLKRAFKQLDKTFLDDL >gi|289777623|gb|GG745508.1| GENE 224 242786 - 243280 732 164 aa, chain + ## HITS:1 COG:STM2335 KEGG:ns NR:ns ## COG: STM2335 COG3013 # Protein_GI_number: 16765662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 164 1 164 164 309 93.0 1e-84 MEMTNAQRLILSNQYKMMTMLDPDNAERYRRLQTIIERGYGLQMRELDREFGQLTEETCR TVIDIMEMYHALHVSWTNLKDAAGIDERRVTFLGFDAATEARFLGYVRFMVNIEGRYSHF DAGTHGFNSQTPMWEKYQRMLSVWHACPRQYHLSSNEINQIINA >gi|289777623|gb|GG745508.1| GENE 225 243292 - 243951 685 219 aa, chain + ## HITS:1 COG:YPO2562 KEGG:ns NR:ns ## COG: YPO2562 COG0637 # Protein_GI_number: 16122780 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 1 217 3 218 220 288 68.0 5e-78 MQCKGFLFDLDGTLVDSLPVVERSWCKWGDRFAIDHDEILSFIHGKQAITSIRHFMPGRS EEDIQAEFRFLEQIEATDIEGIVALPGALTLLSTLNEAGIPWAIVTSGSVPVAHARHRAA GLPMPEVFITAEQVKHGKPAPDAYLLGAERLGLPADQCAVVEDAPAGLLSGLAAGCRTIA VNVPADAPRLDEADLVLSSLDDLVIERQADGYVNVRLKA >gi|289777623|gb|GG745508.1| GENE 226 244028 - 245860 2084 610 aa, chain + ## HITS:1 COG:ECs3176 KEGG:ns NR:ns ## COG: ECs3176 COG0471 # Protein_GI_number: 15832430 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 610 1 610 610 953 85.0 0 MNGELIWVLSLLAIAVVLFATGKVRMDAIALMVIVAFVLSGTLTLNEAFSGFSDPNVILI AALFIIGDGLVRTGVATKMGAWLVSVAGNSETKMLVYLMLTVAGLGAFMSSTGVVAIFIP VVLSVSARMNTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFSFFSVTP IGLVVLILGIVYMLAVRFMLKTENGESARDGRKRSTFRDLIREYHLTGRARRLAIRPGSP MIGQRLDDLKLRERYCANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSASDVDLRQ FCGEQMLEPMVLRGEYFADQALDVGMAEVSLIPDSEMIGKTVREIAFRTRFGLNIVGMKR DGEAMDGSVVDEPLQLGDILLVVGNWRQIALLAKRGRDFVVLNMPVEVDDASPAHSQAPH AIFCLVLMVALMLTDEIPNPIAAIIACLLMGKFRCINAESAYKAIHWPSIILIVGMMPFA LALQKTGGVDLVVKGLMDVAGSEGPYLMLGCLFVMCAAIGLFISNTATAVLMAPIALAAA KSMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGKYSFSDFVKIGVPFTVLVMVVC VLLIPVLFPF >gi|289777623|gb|GG745508.1| GENE 227 245906 - 246505 797 199 aa, chain - ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 347 91.0 6e-96 MSQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGQVNAER IALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPDELRDIFEPLI DEHHYSEEEQSIVKQADALCAYLKCLEELSAGNNEFLLAKGRLEKTLASRRSAEMDYFMQ VFVPSFQLSLDEISQDSPL >gi|289777623|gb|GG745508.1| GENE 228 246587 - 247804 1519 405 aa, chain - ## HITS:1 COG:STM2331 KEGG:ns NR:ns ## COG: STM2331 COG0436 # Protein_GI_number: 16765658 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 834 96.0 0 MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGD EMLVPAPDYPLWTAAVSLSSGKAVHYLCDESADWFPDLDDIRAKITPRTRGIVIINPNNP TGAVYSKELLQEIVEIARQHNLIIFADEIYDKILYDEAQHHSIAALAPDLLTVTFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFI IPGGRLYEQRNRAWELINDIPGVSCMKPKGALYMFPKIDAKRFNIHDDQKMVLDFLLQEK VLLVQGTAFNWPWPDHVRIVTLPREDDLEMAISRFGRFLSGYHQL >gi|289777623|gb|GG745508.1| GENE 229 248681 - 249607 786 308 aa, chain + ## HITS:1 COG:ECs3173 KEGG:ns NR:ns ## COG: ECs3173 COG0583 # Protein_GI_number: 15832427 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 308 1 307 312 405 67.0 1e-113 MINTTRPILNLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR HGRNKLLTEQGIQLLGYARKILRFNDEACMSLMYGSLQGGLTIGASEETADTILPFLLNR IGCFYPRMTLEIKVHPHAAIMAMLAEGRVDLALTTHQPPGFTSFILRTSPTLWYCAAEYV LAKGESIPLILLEEPGPFRQDIIAALEAARVPWHLAHGASSLSGVKAAVKAGLGVTARPV EMMSPDLRVAGISDGLPGLPDTRYVVSCNPQTVSELPQVIFQSLSQESDPWRTGPALTPQ EGDNTFIL >gi|289777623|gb|GG745508.1| GENE 230 250264 - 250704 311 146 aa, chain + ## HITS:1 COG:ECs3172 KEGG:ns NR:ns ## COG: ECs3172 COG0838 # Protein_GI_number: 15832426 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Escherichia coli O157:H7 # 1 144 3 146 147 250 91.0 6e-67 MSTSTEVIAHHWAFAIFLIIAIGLCCLMLVGGWYLGGRARARSKNTPFESGIDSVGSARL RLSAKFYLVAMFFVIFDVEALYLYAWSTSIRESGWVGFVEAAIFILVLLAGLVYLVRIGA LDWTPARSRRTLVNPETDSPTNRHMQ >gi|289777623|gb|GG745508.1| GENE 231 250720 - 251394 859 224 aa, chain + ## HITS:1 COG:STM2327 KEGG:ns NR:ns ## COG: STM2327 COG0377 # Protein_GI_number: 16765654 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 224 1 220 220 449 96.0 1e-126 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKSVYMGKLEHALHDMVNWGRKNSIWP YNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQ MLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI GKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI >gi|289777623|gb|GG745508.1| GENE 232 251494 - 253290 2469 598 aa, chain + ## HITS:1 COG:STM2326_2 KEGG:ns NR:ns ## COG: STM2326_2 COG0649 # Protein_GI_number: 16765653 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Salmonella typhimurium LT2 # 200 598 1 399 399 826 97.0 0 MTDLTAHDAAPAWQTRDHLDDPVIGELRNRFGPDAFTVQPTRTGVPVVWVKREQLLEVGD FLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHLISIDRNRDIMLKVALSENDL HLPTFTKLFPNANWYERETWEMFGMTFDGHPNLRRIMMPPTWEGHPLRKDYPARATEFDP FELTKAKQDLEMEALTFKPEEWGMKRSTDNEDFMFLNLGPNHPSAHGAFRIILQLDGEEI VDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDR VNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAW FRIGGVAHDLPRGWDRLLREFLEWMPKRLDSYEKAALRNTILKGRSVGVAAYTAKEALEW GTTGAGLRATGIGFDVRKWRPYSGYENFDFEVPTGGGVSDCYTRVMLKVEELRQSLRILQ QCLDNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKG INSYYLTSDGSTMSYRTRVRTPSFAHLQQIPSAIRGSLVSDLIVYLGSIDFVMSDVDR >gi|289777623|gb|GG745508.1| GENE 233 253293 - 253793 529 166 aa, chain + ## HITS:1 COG:STM2325 KEGG:ns NR:ns ## COG: STM2325 COG1905 # Protein_GI_number: 16765652 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Salmonella typhimurium LT2 # 1 166 1 166 166 333 96.0 1e-91 MHENQQPQTEAFELSAAEREAIEHEKHHYEDPRAASIEALKIVQKQRGWVPDGAIYAIAD VLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAAIEKKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPTMMIDEDTHSHLTPEAIPDLLEQYK >gi|289777623|gb|GG745508.1| GENE 234 253790 - 255127 1678 445 aa, chain + ## HITS:1 COG:STM2324 KEGG:ns NR:ns ## COG: STM2324 COG1894 # Protein_GI_number: 16765651 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Salmonella typhimurium LT2 # 1 445 1 445 445 895 96.0 0 MKTVIRTAETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGMAPDEIVTAVKDAGLK GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA FALKAYRGYIFLRGEYIEAAQHLRRAIAEATEAGLLGKNILGTGFDFELFVHTGAGRYIC GEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAILANGVEWYQNIS TSKDAGTKLMGFSGRVKNPGVWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL TEAHLDLPMEFESIGKAGSRLGTSLAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE AGIKQQFSNTHAINGIQPNLLKTRW >gi|289777623|gb|GG745508.1| GENE 235 255159 - 257885 3363 908 aa, chain + ## HITS:1 COG:nuoG KEGG:ns NR:ns ## COG: nuoG COG1034 # Protein_GI_number: 16130218 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Escherichia coli K12 # 1 907 3 909 910 1742 90.0 0 MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPASDGTFISIDDGEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVY FGRPEDGTLESEFSGNLVEVCPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPG ERYGELRRIENRYNGTVNRYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDLITLNAEQAMQ GAADILRQSKKVIGIGSPRASIESNFALRELVGADNFYTGIAKGEQARLQMMLKVLREGG VHTPSLRDIESYDAVLVLGEDITQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILN IGQRAKHPLFVTNIDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDDSAPAVDGLSQDLK GKVDVIVQALAGAKKPLIISGTNAGSMEIIQAAANVAKALKGRGADVGVTMVARAVNSVG LGMIGGGSLEEALDELESGAADAVIVLENDLHRHASAARVDAALAKAPLVMVVDHQRTAI MDKAHLVLSAASFAESDGTVVNNEGRAQRFFQVYDPAYYDAKTVMLESWRWLHSLHSTVN NRQVDWTQLDHVIDAAIAALPQLAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANIS VHEPRQPQDKDTMFAFSMEGNNQPSAPRSQIPFAWAPGWNSPQAWNKFQDEVGGKLRHGD PGVRLFEASANGLEYFTAVPASFQAEEGKWRIAPYYHLFGSDELSQRAPVFESRMPEPYI KLNPADAAKLGVNAGAMLSFSVEGQTLRLPLVISEGLTAGQVGLPMGMPGIAPVLTGSRI DSLQEAKA >gi|289777623|gb|GG745508.1| GENE 236 257882 - 258859 1329 325 aa, chain + ## HITS:1 COG:STM2322 KEGG:ns NR:ns ## COG: STM2322 COG1005 # Protein_GI_number: 16765649 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Salmonella typhimurium LT2 # 1 325 1 325 325 583 96.0 1e-166 MSWLTPDLIDILLSILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMIKMFFKEDWIPRFSDRVIFTLAPVIAFTSLLLAFAIVPVSPTWVVADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV NNQAHLWNVIPQFFGFVTFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTVSALIVTLFFGGWNGPWLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSF GWKVCLPLTLVNLLVTAAVILWQAQ >gi|289777623|gb|GG745508.1| GENE 237 258874 - 259416 819 180 aa, chain + ## HITS:1 COG:STM2321 KEGG:ns NR:ns ## COG: STM2321 COG1143 # Protein_GI_number: 16765648 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 369 99.0 1e-102 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGAERC VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF ELGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP >gi|289777623|gb|GG745508.1| GENE 238 259427 - 259981 859 184 aa, chain + ## HITS:1 COG:ECs3164 KEGG:ns NR:ns ## COG: ECs3164 COG0839 # Protein_GI_number: 15832418 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 290 90.0 1e-78 MEFAFYICGLIAILATLRVVTHTNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYA GAIMVLFVFVVMMLNLGGSEIEQERKWLQPGIWIGPAILSAVLLVVIVYAILGINDQGID GAAINAKEVGIALFGPYVLAVELASMLLLAGLVVAFHIGREERAGEVLSNRVNDSDKRKT EEHA >gi|289777623|gb|GG745508.1| GENE 239 259978 - 260280 447 100 aa, chain + ## HITS:1 COG:STM2319 KEGG:ns NR:ns ## COG: STM2319 COG0713 # Protein_GI_number: 16765646 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Salmonella typhimurium LT2 # 1 100 1 100 100 140 95.0 5e-34 MIPLTHGLILAAILFVLGLTGLVIRRNLLFMLISLEIMINAAALAFVVAGSYWGQADGQI MYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSELRG >gi|289777623|gb|GG745508.1| GENE 240 260277 - 262118 2620 613 aa, chain + ## HITS:1 COG:STM2318 KEGG:ns NR:ns ## COG: STM2318 COG1009 # Protein_GI_number: 16765645 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Salmonella typhimurium LT2 # 1 613 1 613 613 1010 93.0 0 MNMLALTILLPLIGFVLLAFSRGRWSENLSATVGMGSVGLAALVTAYVGVDFFANGKQAV SVPLWNWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYT NLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNNAAAMKAFVVTRVGDVF LAFALFILYNELGTLNFREMVELAPQHFANGSTTLQWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLVLAGFAALV QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLSSGSVILACHHEQ NIFKMGGLRKSIPLVYVCFLVGGAALSALPLITAGFFSKDEILAGAMANGHINLMVAGLV GAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLIVLLVLSTFVGALIVPPLEGVLP QTTELAHGSVMTLEIASGIIAIAGILIAAWLWLGKRTLVTSIANSAPGRFFGTWWFHAWG FDWLYDKVFVKPFLGIAWLLKSDPLNSLMNIPAILSRFAGKGLLVSENGYLRWYVASMSI GAVVVLALLMVLR >gi|289777623|gb|GG745508.1| GENE 241 262420 - 263949 2258 509 aa, chain + ## HITS:1 COG:STM2317 KEGG:ns NR:ns ## COG: STM2317 COG1008 # Protein_GI_number: 16765644 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Salmonella typhimurium LT2 # 1 509 1 509 509 855 95.0 0 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALGLQLWMQGGYSLTQSAGI PQWQSEFVLPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWREIEKYQGFFHLNL MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA SGLVMLIAILALAFVHFNATGVWTFNYEDLLKTPMSHGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMWLGVIGIFY GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG QLYERLHTRDMRQMGGLWSKIKWLPAMSMFFAVATLGMPGTGNFVGEFMILFGSYKVVPV ITVISTFGLVFASVYSLSMLHRAYFGKAKSEIAAKALPGMSLRELSIILLLVVLLVLLGF FPQPILDTSHAAMSNIQQWFVNSVSTTRP >gi|289777623|gb|GG745508.1| GENE 242 263956 - 265413 2243 485 aa, chain + ## HITS:1 COG:ECs3160 KEGG:ns NR:ns ## COG: ECs3160 COG1007 # Protein_GI_number: 15832414 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Escherichia coli O157:H7 # 61 485 1 425 425 657 92.0 0 MTITPQQLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVLGLNAALVSLWFVGQNGA MDVTPMIRVDGYAMLYTGLVLLASLATCTFAYPWLEGYKDNKEEFYLLVLIAALGGILLA GANHLAALFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAN SGNLSFLALGKSLADNTLHEPLLLAGLGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYMPVGNSEAVRVVLGLIAFASIIFGNLMALSQTNIKRLLGY SSISHLGYLLVALIALQSGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLF SYRGLFWHRPILSAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVHAHLWWLVAAVVVGSAI GLYYYLRVAVSLYLSAPEQLNRDAPSNWQYSAGGIVVLISALLVLVLGIWPQPLISIVQL ATPLM >gi|289777623|gb|GG745508.1| GENE 243 265467 - 266387 1088 306 aa, chain - ## HITS:1 COG:elaC KEGG:ns NR:ns ## COG: elaC COG1234 # Protein_GI_number: 16130203 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli K12 # 1 305 7 311 311 447 68.0 1e-126 MELTFLGTSAGVPTRTRNMTSIILNLQQPTRAEMWLFDCGEGTQHQFLHTPYHPGKLNKI FITHLHGDHLFGLPGLLCSRSMQGNSLPLTLYGPKGLKEFVETALRLSGSWTDYPLTIIE VGPGLVFDEEGYRVTAYPLSHPVECYGYRIEQHDKPGTLDAAQLIADGVPPGPLFHQLKR GQRVTLEDGRVIDGSRYLGPATPGKTLAIFGDTAPCPQALEMARGADVMVHETTLEQAMA EKANSRGHSSSQQTAALAKEAGVGTLIATHFSSRYDAEGCLKMLAECREIFANTLLAEDF MVYKMA >gi|289777623|gb|GG745508.1| GENE 244 266445 - 266906 483 153 aa, chain + ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 149 1 149 153 234 72.0 4e-62 MMTWQDLHHSELTVPQLYALLKLRSEVFVVEQQCAYQDVDGDDLVGENRHLLGWRDGELL AYARILKSEETYDPVVIGRVIVSPAARGEKLGHQLMAQALASCQRHWPQKAIYLGAQAHL QAFYAHFGFTPVTEVYDEDGIPHIGMARESRAG >gi|289777623|gb|GG745508.1| GENE 245 267030 - 268331 1124 433 aa, chain + ## HITS:1 COG:STM2310 KEGG:ns NR:ns ## COG: STM2310 COG1169 # Protein_GI_number: 16765637 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Salmonella typhimurium LT2 # 7 431 3 427 431 550 66.0 1e-156 MEVCVLSVSTALARLRDGLSEPFPDSPGTRIIDIAFPLNDAFDPLLWCGQQAQWPQFYWQ QRNGDEELATLGAVKTFSSLDAANRFLCQTGRQDLRICGLNAFEPQQGSLVLPRLEWRRC GGRAVLRLVLHSDISLREDAATARAFLASLTSTQATPGAIPPLLSERHSSDYPQWQAMIA RATKAISAGEMDKVVLARATDLQFAAPLDAVSIMAASRRSNLNCFHFLMAFNARQAFFGS TPERLWRRRGALLRTEALAGTVANHQEDAKAQQLADWLMKDDKNQRENMLVVEDICQRLQ SEASTLDVLPPQVVRLRKVQHLRRCIWTELGAPDDSRCLLQLQPTAAVAGLPRRAALAFI QRHEPFAREWYAGSAGYLSLAQSEFCVALRSAKVDHDTLRLYAGAGIVSGSDAQQEWQEI DNKAAGLRSLLCP >gi|289777623|gb|GG745508.1| GENE 246 268414 - 270084 2082 556 aa, chain + ## HITS:1 COG:ECs3152 KEGG:ns NR:ns ## COG: ECs3152 COG1165 # Protein_GI_number: 15832406 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Escherichia coli O157:H7 # 1 556 1 556 556 932 83.0 0 MSVSAFNRRWAAVILEALTRHGVQHICIAPGSRSTPLTLAAAENRAFIHHTHFDERGLGH LALGLAKASRQPVAVIVTSGTATANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAI RQPGMFASHPSQTISLPRPSQDIPARWLVSTIDQALGALHAGGVHINCPFAEPLYGDMDE TGVEWQQQLGNWWQSDKPWLRQALQLESEKQRDWFFWRQKRGVVVAGRMSAAEGKKVAEW AQTLGWPLIGDVLSQTGQPLQCADLWLGNGKAVSELAQAQIVVQLGSSLTGKRILQWQAT CEPDEYWLVDNLPGRLDPAQHRGRRLLASVERWLELHPAEKRQPWATVIPELSRQAWQAA VASNEPFGEAQLAQRIRRYLPEQGQLFVGNSLVVRLIDALAQLPAGYPVYSNRGASGIDG LIATAAGVQRASARPTLAIVGDLSALYDLNSLALLRQASAPLVLIVVNNNGGQIFSMLPT PQDERRQFYLMPQDVDFSHAAAMFGLAYHRPDDWQSLDEALAGAWRRAGATVIELAVNET DGTQTLQQLLAQVSRL >gi|289777623|gb|GG745508.1| GENE 247 270081 - 270839 813 252 aa, chain + ## HITS:1 COG:ECs3151 KEGG:ns NR:ns ## COG: ECs3151 COG0596 # Protein_GI_number: 15832405 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 1 250 1 250 252 333 68.0 1e-91 MTLSAAVDNGQSGYPWLVFLHGFSGDRDEWREVGDAFPAWPRLYLDLPGHGGSADIAVQD FAGVNTLLLATLNSYNILNYWLIGYSLGGRVAMNFACQPRAGLRGLIVEGGHPGLQDAEA RQARRSNDRAWAERFRRDPLAQVFADWYQQPVFASLDAAQRESLVALRSRNNGATLAAML QATSLAGQADLRAPLQARDFPFHYLCGERDAKFRAIAQALAADTHIIHHAGHNAHRDNPA AVIACLAQILAS >gi|289777623|gb|GG745508.1| GENE 248 270854 - 271711 1256 285 aa, chain + ## HITS:1 COG:STM2307 KEGG:ns NR:ns ## COG: STM2307 COG0447 # Protein_GI_number: 16765634 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Salmonella typhimurium LT2 # 1 285 1 285 285 584 96.0 1e-167 MISLDEAMLYAPVEWHDCSEGYTDIRYHKSADGIAKITINRPQVRNAFRPLTVKEMIQAL ADARYDDNIGVIVLTGEGEKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPK PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYDAQQALDMGLVNTVVPLAELEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP >gi|289777623|gb|GG745508.1| GENE 249 271711 - 272676 1122 321 aa, chain + ## HITS:1 COG:ECs3149 KEGG:ns NR:ns ## COG: ECs3149 COG1441 # Protein_GI_number: 15832403 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 320 320 489 80.0 1e-138 MRVSQVYRWQIPMDAGVVLRERRLKTRDGLFIRLQEDEREGWGEISPLPGFSNETLEEAQ TALLAWAQAWRDGAEPPLPTLPSVAFGISCAQAELYGELPQAADYRAAPLCSGDPDELFA KLAAMPGEKVAKVKVGLWEAVRDGMVVNLLLEAIPDLQLRLDANRAWTPLKAQQFAKYVN PAYRQRIAFLEEPCKTREDSRAFSRETGIAIAWDESLREADFRFVAEPGVRAVVIKPTLT GSVQKVQQQVAAAHALGLSAVISSSIESSLGLTQLARVAAWLTPQTIPGLDTLALMSAQL VRPWPESTLPMINIDALEPLL >gi|289777623|gb|GG745508.1| GENE 250 272673 - 274049 879 458 aa, chain + ## HITS:1 COG:STM2305 KEGG:ns NR:ns ## COG: STM2305 COG0318 # Protein_GI_number: 16765632 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 1 448 1 448 455 642 72.0 0 MMFSDWPWRHWRQLRGEAQALRLNDRLLTWRELCARVDALAAGFAAQGVMEGHGVALRAY NQPETLLAWLALLQCGARVLPLNPQLPAVLLQELLPALTVQHQLVLNGAAQPGDLPALTL QAAEGVHAVCWHGERLVSMTLTSGSTGLPKAAVHSASAHLASAAGVLALMPFAAEDDWLL SLPLFHVSGQGIIWRWLLAGARMTVRDKQPLAQMLQGCTHASLVPTQLWRLLNDDAALSL KAVLLGGAAIPVELTERAHAQGIRSFCGYGLTEFASTVCAKAADGAADVGEPLPGREVKI VAGEIWLRASSMAAGYWRDGQLLPLTNDEGWFATRDRGELHNGRLTVVGRLDNLFFSGGE GIQPEEVERVILAYPAVQQVFIVPLDDVEYGQRPVAVVECDDGCELSALATWSAERLARF QQPVRWLRLPDTLKNGGIKISRQALREWARQQTYATVS >gi|289777623|gb|GG745508.1| GENE 251 274105 - 274530 455 141 aa, chain - ## HITS:1 COG:STM2295 KEGG:ns NR:ns ## COG: STM2295 COG0494 # Protein_GI_number: 16765622 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 141 1 141 141 240 81.0 5e-64 MRQRTIVCPLIQNEGHYLLCKMAADRGVFPGQWALSGGGVEPVERIEEALRREIREELGE KLILTHIAPWSFRDDTRVKTYPDGRQETIYMIYLIFDCVSANRDVTINEEFDDYAWVKAE DLKNYDLNAATRVTLSQKGLL >gi|289777623|gb|GG745508.1| GENE 252 274668 - 275603 875 311 aa, chain + ## HITS:1 COG:STM3508 KEGG:ns NR:ns ## COG: STM3508 COG5464 # Protein_GI_number: 16766796 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 7 309 8 300 304 352 59.0 6e-97 MDRAPHSPHDAVFKHLLSHRATAKDFLDIHLPGPLRALCNLNTLQLESGSFIDDELRASH SDILYSLQTQAGEGYIYLLIEHQSSADRHMAFRLMRYAIAAMQRHLDKGHTQLPLVIPLL FYHGRVSPWPYPMCWLAGFADPDVARRIYGDDFPLIDITTTPDDEIMRHRRVAMLELLQK HIRQRDMMDLHEQLVSLLALGYTSRRQLKTLLHYLLQAGNAADPVAFLRHLAQSVPRRSH KETLMNIAQFLEQRGHQQGLKQGLQQGLQQGLEQGEQQTAERIARAMLASGLDLSLVAKL TGLAPECLARL >gi|289777623|gb|GG745508.1| GENE 253 275884 - 276426 859 180 aa, chain + ## HITS:1 COG:no KEGG:KPK_1495 NR:ns ## KEGG: KPK_1495 # Name: not_defined # Def: outer membrane protein, YfaZ # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 180 1 180 180 308 100.0 6e-83 MKKSIFMALAGVMLVSSAAHAISVTGEAGEHYTNLGVGFGTESTGLAVSGNWLHSDNDGD AAGLGLGLNIPLGPFLATVGGKGVYTNPKQGDEGYAAAVGGGLQWKIGDSFRLYGDYYYS PDSLSSGIDSYQEANVGASWTIMRPLSIQAGYRYLNLAGKDGNRDNTIADGPYIGASASF >gi|289777623|gb|GG745508.1| GENE 254 276529 - 277725 1566 398 aa, chain + ## HITS:1 COG:yfaY KEGG:ns NR:ns ## COG: yfaY COG1058 # Protein_GI_number: 16130184 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Escherichia coli K12 # 1 398 1 398 400 659 83.0 0 MLNVEMLSTGDEVLHGQIVDTNAAWLADFFFNQGLPLTRRHTVGDDLDALVAILRERSEQ ADVLIVNGGLGPTSDDLSALAAATAKGEGLILHPEWLETMTRFFAERGRPMAESNRKQAE IPASAEMINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEQEILPRLRQRFTLPEPPV CLRLTTFGRSESELAQSLNPLTLPPGVVMGYRSSMPIIELKLTGPADQRDAMLALWPEVR KVAGDSLIFEGTEGLPAQIARCLQERQLSLTLSEQFTGGLLALQLSRAGAPLLASEVVPA QEETLAQAARWAAERRINHFAGLALAVSGQENDHLNVALATPDGTFALRVKFSVTRHSLA VRQEVCAMMALNMLRRWLNGQPLASEHGWINVVDSLSL >gi|289777623|gb|GG745508.1| GENE 255 277931 - 278716 992 261 aa, chain + ## HITS:1 COG:STM2292 KEGG:ns NR:ns ## COG: STM2292 COG1414 # Protein_GI_number: 16765619 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 441 84.0 1e-124 MLESTKVPALTRAIEILNLISRIGPCSAATIIAELGIPKSTVYLLLGELKKQRFISMDNQ DNYCLWTKLVELAGQALSKMDLRELARPRLTRLMDECGLLCHLGIIDQGNAYYILKIESP ATISVRSHEGKSLSLYRSGIGKCLLAWQPASVQASIIDDLQWERATPTTITDAQQLREEL GRIRARGWSFDNGEDYPDVRCVAAPVFNANNDLTAAISVVGTRLQINEDNRDYLAGKAIA CAKDISRLLGWKSPFEQLASS >gi|289777623|gb|GG745508.1| GENE 256 278727 - 279932 1675 401 aa, chain + ## HITS:1 COG:ECs3135 KEGG:ns NR:ns ## COG: ECs3135 COG4948 # Protein_GI_number: 15832389 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 401 5 405 405 826 94.0 0 MTLPKIKHVRAWFTGGATAEQGAGGGDYHDQGANHWIDDHIATPMSKYKEYEQSRQSFGI NVLGTLIVEVEADNGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLNATL YYAGSGGLVMNTLSCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAQEMG FIGGKMPTHWGPHDGDAGIRKDVAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACA PYNLKWIEECLPPQQYEGYRELKRQAPAGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVG WCGGLTTLVEIAAIAKARGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCATLRPQF DPILLGEPVPERGRIHKSVLDKPGFGVELNRDCNLKRPYQH >gi|289777623|gb|GG745508.1| GENE 257 279975 - 281264 1799 429 aa, chain + ## HITS:1 COG:STM2290 KEGG:ns NR:ns ## COG: STM2290 COG0477 # Protein_GI_number: 16765617 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 429 1 429 429 675 86.0 0 MSNTLLESVVKKNRARLIPFMLALYVLAFLDRSNIGFAKETYQLDTGLSNEAYALGAGIF FVVYAFLGVPANLLMRKFGARKWIGCTTLLWGVLSAAMAWADTEAKFLLVRTLLGAAEAG FFPGMIYLTSQWFPQQNRASIMGLFYMGAPLALTLGSPLSGALLEMHGFMGHPGWFWMFV IEGLLAVAAGAFTFFWLDDSPQHARFLSMEEKQALISELAREEEKKIASRLSDALRNGRV WQLALIYLTIQVAVYGLIFFLPTQVAALLGTKVGFVASVVTAIPWVAALFGTWLIPRYSD RTGERRNIAALTLLAAAVGIAVSGLVAPVLAIIALCVAAVGVIAVQPVFWTMPTQLLSGT ALAAGIGFVNLFGAIGGFLAPIVRVQAENLFASSAAGLLTLAGVAIVGVVIIFSLSLTRA VPQRGSVQH >gi|289777623|gb|GG745508.1| GENE 258 281279 - 282082 984 267 aa, chain + ## HITS:1 COG:STM2289 KEGG:ns NR:ns ## COG: STM2289 COG3836 # Protein_GI_number: 16765616 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 447 83.0 1e-126 MNALLSNPFKRGLLRGETQIGLWLSSTSSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQ LQAIAPYASQPVIRPVEGNRSLIKQVLDIGARTLLVPMVDTAEQAREVVSATRYPPIGSR GVGAGVARAARWGRIENYMAEANDELCLLIQVESRTALENLDAILEVDGIDGVFIGPADL SASLGHPDDAGHPDVQRVIEQSIRRIRAAGKAAGSLAVDPAMAEKCLAWGANFVAVGVDT MLYTQALDRRLAMFKPTCAQPQEKASY >gi|289777623|gb|GG745508.1| GENE 259 282111 - 283289 1334 392 aa, chain - ## HITS:1 COG:STM2286 KEGG:ns NR:ns ## COG: STM2286 COG0247 # Protein_GI_number: 16765613 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Salmonella typhimurium LT2 # 1 392 1 396 396 695 82.0 0 MNDTRFESCIKCTVCTTTCPVSRVNPRYPGPKQAGPDGERLRLKDGALYDEALKYCINCK RCEVACPSDVKIGDIIQRARAQYGQQKPTLRDAILSHTDLMGTLSTPFAPLVNATTGLKP VRRLLDAALKIDHRRTLPKYGFGTFRRAYRQLAARQAQYPEQVVFFHGCYVNYNHPQLGK DLIRVVNALGTGVQLLSKEKCCGVPLIANGFFDKARKQAQSNVAAMRENTLPIIATSSTC TFTLRDEYPHLLDVDNSDLRDRVELATRWIWKQLDAGKTLPLRRLPLKVVYHTPCHMEKM GWSLYTLELLRLIPGLQLEVLDSQCCGIAGTYGFKTENYAVSQAIGAPLFRQIEESGADI VVTDCETCKWQIEMSTRKRCEHPLTVLAQALA >gi|289777623|gb|GG745508.1| GENE 260 283286 - 284545 1073 419 aa, chain - ## HITS:1 COG:STM2285 KEGG:ns NR:ns ## COG: STM2285 COG3075 # Protein_GI_number: 16765612 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 418 1 418 419 507 63.0 1e-143 MKFDCAIVGGGLAGLLCGLALNQYGLRSVIISRGQSALHFSSASLDLLSALPNGDNVTDV AQGLQQLAEQLPEHPYSRLGAGAVLEYATQTEALLAACGANMQGEARQPHLRVTPLGTLR PAWLSPEEVLLAPFAQQHVCLVGISGFADFQPHLAAAALGQHGVTAAAVEIELPLLDVLR DNPTEFRAANIARVLDDENLWPALHAALLPLAQQHDLLIMPACFGLADDRLYRWLQTRLP CPLRLLPTLPPSVPGMRLHSQLQRQFIREGGTWLAGDEVVKISHRQGAVEAVWTRNHGDV ALRPRFTVLASGSFFSNGLVATRDSVREPILGLDLQQTLPRESWYQRDFFVSQPWQRFGV KTDALLRPVLGGQPFHNLFAIGSLIGGFDAIQLGCGGGVCAVTALHAARQIHALAGDRP >gi|289777623|gb|GG745508.1| GENE 261 284535 - 286157 1896 540 aa, chain - ## HITS:1 COG:STM2284 KEGG:ns NR:ns ## COG: STM2284 COG0578 # Protein_GI_number: 16765611 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 23 540 25 542 542 867 81.0 0 MTGRLDSEVIIIGGGATGAGIARDCARRGLRTLLIERHDIATGATGRNHGLLHSGARYAV TDNESARECISENRILRRIARHCIEPTNGLFITLPEDDLAYQQTFITACQQAGIEATPLS PQEALRREPAVNPTLLGAVQVPDGTIDPFRLTAANMLDAREHGAQILTGCEVTGLLRQGD RVCGVQVYDRQLHQARTLYAGVVVNAAGIWGQRIAEYADLRITMFPAKGSLLILDHRINN LVINRCRKPADADILVPGDTISLIGTTSMHIPYDDIDDNRVTTAEVDTLLREGEKLAPVM GRTRILRAYSGVRPLVASDNDPSGRSVSRGIVLLDHAQRDGMEGFITITGGKLMTYRLMA EWATDAVCRKLGNTTPCSTAETPLPGSQEPTESTLQKIISLPTPLRGSAVYRHGDRTPAW LGDSRQHRSLVCECEAVTAGEVKYAVENLAVNTLLDLRRRTRIGMGTCQGELCACRAAGL LQRFNVTTPAQSLTQLSAFLNERWKGVQPIAWGDALRESEFTRWVYLGLCGLPQEHQDEV >gi|289777623|gb|GG745508.1| GENE 262 286429 - 287775 1935 448 aa, chain + ## HITS:1 COG:STM2283 KEGG:ns NR:ns ## COG: STM2283 COG2271 # Protein_GI_number: 16765610 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 446 1 446 452 831 93.0 0 MLSIFKPAAHKARLPAAEIDPLYRRLRWQIFIGIFFGYAAYYLVRKNFALAMPYLIEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRIFLPAGLILAALVMLVMGFVPWATSSI MIMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM AWFNDWHAALYMPAFGAILLAIFAFAMMRDTPQSCGLPPIEEYKNDYPDDYSEKHEEELT AKQIFMQYILPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY AGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIATVVYWLNPPGNPGVDMACMIIIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSVLAVILLVIVMLGERRHHQQLKQA >gi|289777623|gb|GG745508.1| GENE 263 287785 - 288852 1478 355 aa, chain + ## HITS:1 COG:STM2282 KEGG:ns NR:ns ## COG: STM2282 COG0584 # Protein_GI_number: 16765609 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Salmonella typhimurium LT2 # 1 352 1 352 356 608 83.0 1e-174 MNMKLTALMSGMILASSALCFSAVAAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLE QDLVMTKDDRLVVLHDHYLDRVTDVAQRFPQRARKDGRFYAIDFTLAEIKSLKFTEGFEP KNGKNVQTYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGK DIAASTLKVLKEYGYTSKQDKVYLQCFDANELKRIKNELEPKMGMDLNLVQLIAYTDWNE TQQKQADGKWVNYSYDWMFKPGAMAQIAQYADGIGPDYHMLVAEGSKPGAVKLTAMVKEA HASHLQVHPYTVRADQLPEYATNVNQLYDLLYHQAGVDGLFTDFPDKAVQFLDAK >gi|289777623|gb|GG745508.1| GENE 264 288946 - 289200 217 84 aa, chain - ## HITS:1 COG:STM2279 KEGG:ns NR:ns ## COG: STM2279 COG0633 # Protein_GI_number: 16765606 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 84 1 84 84 146 85.0 8e-36 MKRIFLKISDTRLECQDEHPSLLAALESHNIDVEYQCREGYCGSCRTRLVSGQVDWLTEP LAFIQPGEILPCCCRAKGDIEIEM >gi|289777623|gb|GG745508.1| GENE 265 289200 - 290330 1809 376 aa, chain - ## HITS:1 COG:STM2278 KEGG:ns NR:ns ## COG: STM2278 COG0208 # Protein_GI_number: 16765605 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 376 1 376 376 743 97.0 0 MAYTTFSQTKNDQLLEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS RSYTHIIRNIVNDPATVFDDIVTNEQIQKRAEGISHYYDSLIEMTSYWHLLGEGTHTVNG KTVTVNLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIRLIARDEA LHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQEKEWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG QIDSEVDADDLSNFQL >gi|289777623|gb|GG745508.1| GENE 266 290432 - 292717 3245 761 aa, chain - ## HITS:1 COG:STM2277 KEGG:ns NR:ns ## COG: STM2277 COG0209 # Protein_GI_number: 16765604 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 761 1 761 761 1511 94.0 0 MNQSLLVTKRDGTTERINLDKIHRVLDWAAEGLNNVSISQVELRSHIQFYDGIKTADIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAFGQFEPPALYDHVVKMVEKGKYDHHLL EDYTEEEFQQMDGFLDHWRDMNFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL FSNYPRETRLDYIKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPMWHLEVESLLVLKNNRGTDANRVRHMDYGVQINKLMYTRLLKGGDITLFSPSD VPGLYDAFFADQDEFERLYTQYEQDDSIRKQRIKAVELFSLMMQERASTGRIYIQNVDHC NTHSPFDPVVAPVRQSNLCLEIALPTKPLEDVNDENGEIALCTLSAFNLGAIDSLDELEE LAVLAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT HKTFEAIQYYLLKASNELAIEQGACPWFNETTYAQGILPIDTYKKDLDGIVSESLHFDWE ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGHVSIKASKDGILRQVVPDYE NLQNAYELLWEMPNNDGYLQLVGIMQKFIDQSISANTNYDPTRFPSGKVPMQQLLKDLLN AYKFGVKTLYYHNTRDGAEDAQDDLAPSIQDDGCESGACKI >gi|289777623|gb|GG745508.1| GENE 267 293062 - 293790 951 242 aa, chain - ## HITS:1 COG:STM2276 KEGG:ns NR:ns ## COG: STM2276 COG2227 # Protein_GI_number: 16765603 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 242 455 90.0 1e-128 MNAEKTSVAPNVDHAEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLFGKKV LDVGCGGGILAESMAREGATVTGLDMGAEPLQVAKLHALESGIQVDYVQETVEEHAAKHP QQYDVVTCMEMLEHVPDPQSVVHACARLVKPGGQVFFSTINRNGKAWLMAVVGAEYVMKM VPKGTHDVKKFIKPAELLSWVDQTTLKEQHIIGLHYNPLTNTFKLAPGVDVNYMLHTTAK QD >gi|289777623|gb|GG745508.1| GENE 268 293937 - 296570 3638 877 aa, chain + ## HITS:1 COG:STM2272 KEGG:ns NR:ns ## COG: STM2272 COG0188 # Protein_GI_number: 16765599 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Salmonella typhimurium LT2 # 1 868 1 868 878 1600 96.0 0 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM RYTEIRLAKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT NIPPHNLTEVINGCLAYVDDEDISIEGLMAHIPGPDFPTAAIINGRRGIEEAYRTGRGKV YIRARAEVEVDAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKTALVAQAWDLGNV AAMLERAGDDAARPEWLEPEFGVRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLEQIAELLHILGSADRLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQEDVV VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGVNVFMATASGTVKKTAL TEFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDAVRAMGRTATG VRGIKLAENDSVVSLIIPRGEGAILTVTQNGYGKRTAAAEYPTKSRATQGVISIKVTERN GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAEDENVVGLQRVA EPVDDEELDAIDGSVAEGDDDIAPEADTDDDIAEDEE >gi|289777623|gb|GG745508.1| GENE 269 296702 - 299542 3289 946 aa, chain + ## HITS:1 COG:rcsC_1 KEGG:ns NR:ns ## COG: rcsC_1 COG0642 # Protein_GI_number: 16130155 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 17 713 1 699 700 1214 82.0 0 MKYLASFHTTLKVSRYLFRALAVLLWLLIAFVSVFYIVNALHEREAEIHQELNLNADQAQ RYIQRTADVIKELKYVAGNRLSAGDAVAQGQNGDIAVPNFEPLYPDSDCSAMSSTWRNSL QSLAWFMRYWRDNFTAAYDLNRIFLIGSDNLCMANFGLRDVPIERDQALKVLHQRIEQYR NAPQNERGNNLFWISQGVRPGVGYFYALTPVYMANRLQAMLGVEQTIRMESFFTPGSLPM SVTIFDDNGQPLISLAGAEGKIQSEAKWMQERMWFGYSAGFRELVLKKSLAPSSLSIVYS VSVDQVLERIRMLIINAIILNILTGAMLFALARMYERRIFIPAENDAQRLEEHEQFNRKI VASAPVGICILRTVDGTNILSNELAHNYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNHT NLQISFVHSRYRNENVAICVLVDVSARVKMEESLQEMAQAAEQASQSKSMFLATVSHELR TPLYGIIGNLDLLQTKALPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPRE FSPREVMNHISANYLPLVVRKQLGLYCFIEPDVPEQMSGDPMRLQQVISNLLSNAIKFTD TGCIILHVQCAGDYLQISVRDTGEGIPAKEVLRLFDPFFQVGTGVQRNFQGTGLGLAICE KLISMMDGDIAVETEPGMGSRFTIRIPLYGVQNTPQVTADGFAGKTCWLAIHNTSLAMFV TSLLSYHGLTVRRHAGETPDADDVLLTDDEAHRGWQGSAMVIFCRRHIGIPQERAAGEWL HSVTTPHELLPLLGRIFHVALDSAENSRALMAPDAQIGNNDDMMILVVDDHPINRRLLAD QLGSLGYQCVTANDGVDALNVLSKQHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGV TANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLTVYAARVRNGRE >gi|289777623|gb|GG745508.1| GENE 270 299588 - 300238 925 216 aa, chain - ## HITS:1 COG:STM2270 KEGG:ns NR:ns ## COG: STM2270 COG2197 # Protein_GI_number: 16765597 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 389 97.0 1e-108 MNTMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP GDKYGDGITLIKYIKRHFPDLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL AALQKGKKFTPESVSRLLEKISASGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK TISSQKKSAMMKLGVENDIALLNYLSSVSLSSTDKE >gi|289777623|gb|GG745508.1| GENE 271 300254 - 302911 2529 885 aa, chain - ## HITS:1 COG:STM2269_1 KEGG:ns NR:ns ## COG: STM2269_1 COG0642 # Protein_GI_number: 16765596 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 5 695 11 699 699 951 73.0 0 MTPKKFSLIPGNISRFFILMVIVLLATMGVMIQSAVNAWLKEKSYQVVDVSHALHQRIDT WRYATWQIYDNIAATSANAASGGLQETRLKQDVYYLEKPRRKTEALIFGSHDSSTLEMTQ KMSDYLDILWGAETIPWSMYYLNGLDNSLILVSTLPLKDLSSSFKESTISSVVESRRAEM LLQANTLDERETFSPLRHLAWQNAHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMALD SFRIEPDPSQNLATNPDKETTDHIGITFNGMQIDIATDISTTGMQLLWTVPLSSMLLAAL QNILLPLLLNIGLLALALFGFTTFRHFKGRSNPSGAGLPSAANSELRLLRAINEEIVSLL PLGLLVHDQEANRTLISNPIADHLLPHLNLQNITNMADQHQGVIQATVNNEQYEIRQYRS QVAPRTQILIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQHIGSALKQPALNLAAEA AALSSTENRTLAQHADELVKLIDDIQLANLLESDTWKTSQALFSVQELIDDVVPEVLPAM KRKGLQLLINNALPAGEQRYGDREALRRTLVLLIQYSITTTPIGKITLDVCQDESASDRL TFRILDTGNGVSANEIDNLHFPYLNETQSDLYGKANALTFWLCDRMTRKLGGQLTIKARE SLGTRYTLHLKMPASEEAPEAGEHLLDDVIVLLDVTSSEVRRIVTRQLESWGASCITPDD RATSQAFDLYLTDNPSNLTASGLLLSDDEVGIRKIGPGQLRVNFNISTAMQEAILQLIEQ QLAEEAVQPATSGNESNAELHASGYYALFADTVPDDVQRLYTEIEAGDFAALAQTAHRLK GAFAMLNLIPGKQLCETLEHLIREKDAQGIEKYISDIDAYVKSLL >gi|289777623|gb|GG745508.1| GENE 272 303683 - 304774 1566 363 aa, chain + ## HITS:1 COG:ECs3104 KEGG:ns NR:ns ## COG: ECs3104 COG3203 # Protein_GI_number: 15832358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 363 1 367 367 518 81.0 1e-147 MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKIDGLHYFSDDKSVDGDQTYMRVG VKGETQINDQLTGYGQWEYNVQANNTESSSDQAWTRLAFAGLKFGDAGSFDYGRNYGVVY DVTSWTDVLPEFGGDTYGSDNFLQSRANGVATYRNSDFFGLVDGLNFALQYQGKNGSVSG EGATNNGRGAQKQNGDGYGTSVTYDIFDGISAGFAYSHSKRTDDQNNLVLGNGDNAETYT GGLKYDANNIYLATQYTQTYNATRAGSLGFANKAQNFEVVAQYQFDFGLRPSVAYLQSKG KDLEGYGDQDLLKYVDVGATYYFNKNMSTYVDYKINLLDDNSFTRNAGVSTDDVVALGLV YQF >gi|289777623|gb|GG745508.1| GENE 273 304878 - 305930 1330 350 aa, chain + ## HITS:1 COG:STM2266 KEGG:ns NR:ns ## COG: STM2266 COG1477 # Protein_GI_number: 16765594 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Salmonella typhimurium LT2 # 1 350 1 350 350 557 78.0 1e-159 MDMTFFRAALLGACVLLSGCDSATTPATPASTATVLDGKTMGTFWRVSVIGVDEAKAEAL RAKVQAQLDADDRLLSTWKNDSALMRFNHAADTRPWPVSEAMADIVTLSLRIGAKTHGAM DITVGPLVNLWGFGPDKQPVTTPDAQAIAAAKARTGLQHLQVINQSGRQFLQKDIPDLFV DLSTVGEGYAADHLARLMEQEGISRYLVSVGGALVSRGMNGEGKPWRVAIQKPTDRENAV QAIVDINGHGISTSGSYRNYYELDGKRISHVIDPQTGQPISHKLVSVTVIAPTALEADGW DTGLMVLGPEKAQQVVREQGLAVYMIVKEGEGFKTWMSPQFRTFLVGEKN >gi|289777623|gb|GG745508.1| GENE 274 306004 - 307068 930 354 aa, chain + ## HITS:1 COG:Zada_1 KEGG:ns NR:ns ## COG: Zada_1 COG2169 # Protein_GI_number: 15802766 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 184 1 184 184 255 69.0 9e-68 MKPIVADTDDRRWQAVCERDTRADGQFVFAVLTTGICCRPSCRSRRARRENVRFFADVAA AVAAGFRPCKRCQPDKDDPQQQRVDKVAQACRLLEQDAPLTLEALARELAVSPFHFHRLF KSVTGMTPKAWQQAWRARRLREALEQGNTVTRAALAAGFPDSSSYYRQADAALGMTARQF RRGGAATVVTWTTGDCALGRCLVAQSERGVCAVLPGDNDTALLDDLRQRFPNAELRQGTP EFRRQMAEVFAHLDDSRRPVSLPLDLQGTAFQLQVWQALRQIPAGETRSYRQVAEHIGLP RAARAVAGACAANSLAVIVPCHRVVREGGALSGYRWGTARKAQLLAREAQYEEE >gi|289777623|gb|GG745508.1| GENE 275 307068 - 307721 775 217 aa, chain + ## HITS:1 COG:ECs3101 KEGG:ns NR:ns ## COG: ECs3101 COG3145 # Protein_GI_number: 15832355 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 345 78.0 4e-95 MLDLFSDTPPWQEPLAPGAVVLRRFARERAPALLQAIADVARQSPFRQMVTPGGYTMSVA MTNCGALGWTTDRHGYLYDPVDPLTDQTWPPMPAVFRELALAAAAAGGYPNFSPDACLIN RYQPGAKLSLHQDKDEQDLRAPIVSVSLGLPAIFQFGGLQRSDPLQRLLLEHGDVVVWGG ESRLFYHGIQPLKAGHHPETGDCRYNLTFRQAGSRQY >gi|289777623|gb|GG745508.1| GENE 276 307796 - 309439 182 547 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 326 541 133 357 398 74 31 1e-11 MELLSLVWRQYRWPFLGVIALSLLSAALGIGLIAFINLRLITAVDTSLRVLPEFLGLLGL LMAVTLGSQLALTTLGHHFVYRLRGEFVKRILDTQIEQVEKIGSASLLAGLTSDIRNITI AFVRLPELVQGIILTFGSAAYLAWLSGKMMLVTALWMALTIWGGFVLVSRVYKHMASLRE TEDKLYHDYQTVLEGRKELTLNRERAEYVFNQLYLPDAREYRHHIVRADTFHLSAVNWSN IMMLGAIGLVFWMANSLGWADTAVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLR QFSLAPYQAEFPRLQAHPDWQTLELRDVTFHYPDQRFAVGPLNLTLKRGELVFLIGGNGS GKSTLAMLLTGLYQPVSGQILVDGQPLAADKPEEYRKLFSAVFTDVWLFDRLLGPQGEEA DPALVATWLERLQMAHKLQLENGKIADLRLSKGQKKRVALLLALAESRDIILLDEWAADQ DPHFRREFYQVLLPLMQQMGKTVFAISHDDHYFQHADRLLEMRAGQLSELTGEERAQASR DAVARTA >gi|289777623|gb|GG745508.1| GENE 277 309595 - 311031 1957 478 aa, chain + ## HITS:1 COG:YPO2839 KEGG:ns NR:ns ## COG: YPO2839 COG2239 # Protein_GI_number: 16123034 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Yersinia pestis # 14 478 27 491 491 566 64.0 1e-161 MSVLHKKSARLRDEERARLIWLLSTDKAVTSALLGKLMLAERYDEGTLADDLAEVEILVS HLPPPDLADALEALPYDARTALWCLVPDDKRGEVLLEASENVWGDLIDKMSDPELLQAMQ PLDIDEQVYLLQHLPRNLTGRLLATLPAEKRARIRQIMRYADNSVGSIMEFEVITVRPEA TLAAVQRYLRRLGKMPENTDKLFVTTRNKLLLGELELQTILLNDAQKRVGEVMEGDPVTF QPHEEAEKVARTFERDDLLSAAVIDADGKLIGRLTIDEIVDVVYEETDNDLRRMGGLSDE EDVFAPVSKAVKTRWAWLAVNLCTAFIASRVIDGFEHTISQLVALASLMPIVAGIGGNTG NQTITMIVRAMALQQIQPGSFTFLILREMGVALINGLVWGGIMGAITWWLYDDPQLGGVM TLAMMLNLLMAAMMGVIIPMVMVKLGRDPAVGSSVMITAITDTGGFFIFLGLATLFLM >gi|289777623|gb|GG745508.1| GENE 278 310994 - 312232 1352 412 aa, chain - ## HITS:1 COG:Cgl1438 KEGG:ns NR:ns ## COG: Cgl1438 COG0659 # Protein_GI_number: 19552688 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Corynebacterium glutamicum # 32 395 1 365 462 312 53.0 7e-85 MPPVSDPAASGNLRPILRSPSLLTREVLAGVLSALALIPEVISFSVIAGVDPQVSLVASV VLCLAMSVLGGRPAMVTAAAGSVALVIGPMVHQYGVGYILPAVILAGMIQILFGLCGMAR LMRFIPPAVMTGFVNALGILIFFAQVPHFWSRQPLIVGLFVLTLLIVLWAPRFIKAVPAP LIAIVALTLYTVTTGQQLPTVGDEGSMSGGLPGFTALTVPLNLATLQIIWPCALSIAFVG LMESLLTAKLVDDLTHTPSNKSRESAGLGIANILAGCYGGIAGCAMIGQTIVNVEMGRAR SRLSTVIAGLVLLLLVTALSQVMAQIPMAVLAGVMVIVAVKTFSWHSIRPGELVRNPWPE TLVMLVTVAATVGTSNLAIGVLAGIVAMALIPRRLRTKAQATSETASPDQGK >gi|289777623|gb|GG745508.1| GENE 279 312513 - 314147 1985 544 aa, chain + ## HITS:1 COG:ECs3099 KEGG:ns NR:ns ## COG: ECs3099 COG0579 # Protein_GI_number: 15832353 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 544 1 548 548 827 74.0 0 MNKKMAVPRSQAVGPNSTRTNTRHEQETDVLLIGGGIMSATLGTWLQELEPDWSITMVEQ MSSVAEESSNGWNNAGTGHAALMELNYTPQTANGINIDKAVDINEAFHISRQFWAHQVTR GVLNKPKSFINSVPHMSFVWGEDNVNFLRARYAALQQSELFRGIRYSEDHQQIKAWAPLV MEGRDPQQKVAATRTEVGTDVNYGEITRQLIAGLQKHDNFSLQLGTVVRRFKRNADKSWT VTLADADNRRQKRVIKAKFIFIGAGGAALTLLQETGIPQAKEYAGFPVGGQFLVCENPEV VNHHLAKVYGQAEVGAPPMSVPHIDTRIIDGKRVVLFGPFATFSTRFLKNGSLWDLLAST NTSNILPMLNVGLDNFDLVKYLISQVMQKDKDRLAALCEYYPEARKEDWRLWQAGQRVQI IKRDAKKGGVLRLGTEVVSDDEGTVAALLGASPGASTAAPIMLQLMEKVFKDKVNSPEWQ ARLKAIIPTYGIRLDGNPAEIEKALAWTSEVLELKYEPAAVADQAPQAELKPLSGGKPMA DIAL >gi|289777623|gb|GG745508.1| GENE 280 314213 - 314704 629 163 aa, chain - ## HITS:1 COG:ECs3098 KEGG:ns NR:ns ## COG: ECs3098 COG4574 # Protein_GI_number: 15832352 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli O157:H7 # 4 163 1 162 162 248 75.0 2e-66 MKKITTLAVSLLTAACMSAGAQAADQPLEKVAPFPKAEKGMKRQVIQLPQQQDESALKVE LIIGQTLEVDCNHHRLGGKLESKTLEGWGYDYYIFDKLSGPVSTMMACPDGKKEKKFVTA GLGDDAMLRYNSKLPIVVYAPSNVDVKYRIWRADETIGNAVVR >gi|289777623|gb|GG745508.1| GENE 281 314857 - 315966 1488 369 aa, chain - ## HITS:1 COG:PA2651 KEGG:ns NR:ns ## COG: PA2651 COG0628 # Protein_GI_number: 15597847 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Pseudomonas aeruginosa # 25 347 25 347 352 322 52.0 1e-87 MRVNGLTKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGL AALLTIVIICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPGWARSF LAEHNLDSAQQIQQQLSDVALKSGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGP YLVLLTLESLPLSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSIL WGALMAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVG KDTKMPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNLLSGREHAGNTDELDEEFI EEAKNSRNE >gi|289777623|gb|GG745508.1| GENE 282 316315 - 316503 243 62 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1427 NR:ns ## KEGG: Kvar_1427 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 62 1 62 62 94 100.0 2e-18 MKNIGVVTALLLAATLSSGVMAAEKSQTHPEAGSNIDTSMHQNHIDVSHAFDKESLTAGN LQ >gi|289777623|gb|GG745508.1| GENE 283 316574 - 316783 224 69 aa, chain - ## HITS:1 COG:no KEGG:KPK_1527 NR:ns ## KEGG: KPK_1527 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 69 1 69 69 65 100.0 7e-10 MKSIKTFVAVAALSMISFGTFAQSISASASTLDRAEAKIAAQAAEQGASYKITSAQFNNR VHMTAELTK >gi|289777623|gb|GG745508.1| GENE 284 317117 - 317857 628 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 242 1 242 245 246 52 3e-63 MITINKISKSFSGERVLKEVSLSIHSGEIICIIGPSGSGKTTLLRTLNFLEPADSGQIRI DDVALDCAKAGKKEIEKLRAKTAMVFQSWNLFHNLTALQNITEGLIYAQKRPRQEAQDIA EQLLKQVGLLHKKDSYPHSLSGGQKQRIGIARALAINPAVLLLDEPTSALDPEKVGEVLE LIQTIAAAGQTMIIVTHEMAFARQVASRVVFMENGEIVEQGPAEQIFGAAQQGRTRAFLA QLHYHA >gi|289777623|gb|GG745508.1| GENE 285 317866 - 318564 813 232 aa, chain + ## HITS:1 COG:SPy1658 KEGG:ns NR:ns ## COG: SPy1658 COG0765 # Protein_GI_number: 15675528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 6 226 25 249 267 105 31.0 7e-23 MNNNPLFNWQDIAGILPKLLENLPVTLGITLASLLLGLTIALLIVLLQFSRFKPLSAVAN GYTDILRGAPLALLILLFFFGGKLILTALALPPLWISDTTFAVLSISVSISPYFAEMMRS AWRAVDTGQKEAIISLNIPWHKGMLRIIFPQGLIIAIPVFGNLLINLVKMTSLVNIIGIV DIFGRAQKISQNSYGAKQVAAFISVIIVYWVLNSIILYFTTRIEKKYQFLLE >gi|289777623|gb|GG745508.1| GENE 286 318574 - 319326 493 250 aa, chain + ## HITS:1 COG:lin2442 KEGG:ns NR:ns ## COG: lin2442 COG0765 # Protein_GI_number: 16801504 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 2 227 5 224 238 131 36.0 1e-30 MFSLAFIRDNFTFILSALPVTLVITLLSLLFSTLLGAALAWVIIRQVPGVQWGAKVFLSF SRSVPVLVMMYFFFYVWPWIAAGLFGGPQDNMYHYKLSPLVAAVTALSLIFSAYFAETFR AGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVLIDLIKDTSLVYTITV IDLMAKANIAAARGFHFVEAYCVVLVIYIVLCLAIARALRSVERFLRARWQGNVKKSVPR LSFWGRYFEK >gi|289777623|gb|GG745508.1| GENE 287 319337 - 320158 987 273 aa, chain + ## HITS:1 COG:BS_ytmJ KEGG:ns NR:ns ## COG: BS_ytmJ COG0834 # Protein_GI_number: 16079990 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 8 256 17 261 269 92 29.0 1e-18 MSALTLAMGINAAQAVEKSPHAKTIEVVVNANGFPFSFVDDNNNITGYDGDLLKVLDQRL TDYTFHFNAVSRDAMIVGLSTGAYTLAADHFYLTKERAEKYDHSGEPTGISDLRLIVRND ENDIHNLGDLASGKKKLVPIHTSDARYTVIENYNKKHPGQQINLQPNGEQSAADIFKAVA SGEYDAAIYPIGALLALNKALNLNLKASDSVGLFPNVYLYKKNTDPQLIKAIDAQLVALK KDGTLAELSRKWYAEDVYALPGASDVKVNIDWE >gi|289777623|gb|GG745508.1| GENE 288 320163 - 320702 580 179 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1433 NR:ns ## KEGG: Kvar_1433 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 179 1 179 179 347 100.0 1e-94 MTQISSEPAHNAATLNDEVTLALRAITEKRAATIGYLLDESRQRHIADDFAREAIRHYGR DIGHKLRAQMRDRQDLQEFAGLFTRGLESQVYEMEPVSASRAEFIVLFHYCPYVNCWRQQ GRGASEIETLCDICMEGDHALTDAFPGLRLEVQTALARGDAACRLRFYQSESHEAEWQP >gi|289777623|gb|GG745508.1| GENE 289 320680 - 320886 90 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRNGNLKWGPRNQFINQPEAAIQALSGQKLTTVDGDVDGRIYPTDGTGIRVADPARQGR RFGVGHDE >gi|289777623|gb|GG745508.1| GENE 290 320910 - 321698 863 262 aa, chain + ## HITS:1 COG:MA4102 KEGG:ns NR:ns ## COG: MA4102 COG0345 # Protein_GI_number: 20092895 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Methanosarcina acetivorans str.C2A # 3 262 5 270 270 125 29.0 7e-29 MAKVHFIGAGQMTEAIIRASLSNGTLRADAISLEDIDSARIEALHSRYRLSGDGGLSEAS LLVLGIRPQDDLAAVASRVRAQLNGSTTVVSLIAGVTLEKLASLFGETTPIARTIPNTLT DTGFGYSGVTLNAHASAAEIEPFLRGFGKVLYLPERLIDVFTGFGVAGPNYIYYFIESLT DAGVLAGLSRPQATEVVLENLLGAVEMLRQSQKHPRQLLDINNSPAGVGIHALYELNNSD FAAGLQRSVLAAVRRTRELGQR >gi|289777623|gb|GG745508.1| GENE 291 322148 - 323908 2043 586 aa, chain - ## HITS:1 COG:STM2228 KEGG:ns NR:ns ## COG: STM2228 COG3083 # Protein_GI_number: 16765557 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Salmonella typhimurium LT2 # 1 586 1 586 586 985 82.0 0 MVTLRQPYREKVSQMVSWGHWFALFNMLLAMVLGSRYLFVADWPTTLAGRLFSYVSLVGH FSFLVFTSYVLILFPLTFIVVSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPVVW ELVINPDQNEMARDWQLMFISVPVIFLIEMLFATWSWQKLRSLTRRRHYARPVAWFFFLS FISSHLVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQDYQRRLVEQGAPE AVSVQYPLSNLRYRDLGAGYNVLLITVDNLNYSRFEKTMPALAAFAKENVNFTQHMSSGN TADSGLFGLFYGISPGYMDGVLSARIPAALITALNQQGYQLGLFSSDGFSSPLYRQALLS DFSLPSAKTQSDEQTANQWIGWLDRYAQDENRWFSWISLNGTTLDDTQQQGFVRRYSKAA GDVDAQIDRVLTALRAAGKLDNTVVIITGGHGKPLNVKHDSFDWSREQLQVPLVIHWPGT PAQEIATLTDNKDVMTTLMQRLLHVSTPANEYSQGEDLFSAARRRNWVTAANGDTLAITT PTITVVLNHNGTYTTWSRDGEKIKDQKPQLSLLLQVLTDEKRFIAN >gi|289777623|gb|GG745508.1| GENE 292 323927 - 324154 244 75 aa, chain - ## HITS:1 COG:ECs3079 KEGG:ns NR:ns ## COG: ECs3079 COG3082 # Protein_GI_number: 15832333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 104 85.0 3e-23 MPQISRYSDQQVEQLLSELTNVLESHKAPVDLSLMVLGNMVTNLINSSVAPAQRQAIARS FAQALQSSINDDPAH >gi|289777623|gb|GG745508.1| GENE 293 324341 - 325348 1620 335 aa, chain + ## HITS:1 COG:STM2226 KEGG:ns NR:ns ## COG: STM2226 COG3081 # Protein_GI_number: 16765555 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Salmonella typhimurium LT2 # 1 334 1 334 335 595 92.0 1e-170 MSLDIDQIALHQLIKRDEQNLELVLRESLLEPNATVVEMMAELHRVYSAKSKAYGLFNEE SELAQALRLQRQGEEEFLAFSRAATGRLRDELAKYPFAEGGIVLFCQYRYLAVEYLLVAV LNNLSSMRVNEELDIRSTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD FFMDFLGASEGLNAKAQNRGLLQAVDDFAADAQLDKSERQNVRQQVYAYCNEQLQAGEEI ELESLSKELAGVSEKSFQEFTAAQGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML LGERVFWDPATDTLTIKGTPPNLRDQLQRRTSGGN >gi|289777623|gb|GG745508.1| GENE 294 325368 - 326129 699 253 aa, chain - ## HITS:1 COG:AGc4939 KEGG:ns NR:ns ## COG: AGc4939 COG1349 # Protein_GI_number: 15889977 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 248 5 251 266 146 37.0 4e-35 MLASQRKQQILQILTEEKQVMSGELSQRFNVSEDSIRRDLRELAAEGKLQRVHGGALPVS AAIAPIETRKSVQIASKQAVARAAAALIQPGQVVIVDGGTTTAAMIGFLPAELNCTVVTH SPGIAVALVDHPRIEVILLGGKVFKHSVVAVGAETLAGMARINADLFFMGVTGIHPRAGF TTGDYEEAGIKRALAARAAETVVMASREKLNAASAFAIGELSLASTLIVDGEPDAALRQQ LVQCGVEIIPVQR >gi|289777623|gb|GG745508.1| GENE 295 326211 - 326807 815 198 aa, chain + ## HITS:1 COG:CC3530 KEGG:ns NR:ns ## COG: CC3530 COG0494 # Protein_GI_number: 16127760 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Caulobacter vibrioides # 11 190 9 189 195 224 66.0 9e-59 MQTHAPHVRHVRETLLSDNWYTLKKYTFELLRRDGRWQEQSREAYDRGNGAVILLYNREK RTVVLTRQFRFPVFTHGHDGYLIEAAAGLLDNASPEARIVAEAEEETGFRVTRVEPVFTV FMSPGSVTEKLYFFIAEYQADDRRGDGGGLAAEGEDIEVLEWPLARALQAIRDGEIMDAK TIMLLQHLALNADTLLAG >gi|289777623|gb|GG745508.1| GENE 296 326828 - 328114 1553 428 aa, chain - ## HITS:1 COG:PA5542 KEGG:ns NR:ns ## COG: PA5542 COG1680 # Protein_GI_number: 15600735 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Pseudomonas aeruginosa # 58 428 52 414 414 223 36.0 6e-58 MIKKPLALALILAALPAAAMAQNCGDLTLDVCPTPYDQTLPAAKDMLTWDQASRVVGFRN DYRNYAGDVFRHGAAVPLERAEKPLTHASYTLNGHTWTLQDYLKRENVSGMLVLKDGKVA WKYLGNGNTDTTLWTSRSVGKSVVSTLVGIAIQQGKIHSLDDLITVYEPELKGTAWDGVT LRQLIQHTSGVDWNEDYTNPQSHFARLTQCEAQPGAYDCVRKIVSTLSRKHPAGEQWSYS SGGAWLLGDVLERATGMSLAAWLEQSLWQPAGMAHDGVWHAYQQGKHDVGAHGFNATLED WGRFGEFVARDGRLSNGKQLVPAGWFDQAASWTKALNSVSAAHPQGIYGYQWWNNAIPAN AQHVQPTPQEGLQGSLWALGIYGQVIMVNRAEHLVIVQWSTWPQAEPSFNAQPLEAALMY SAIARELR >gi|289777623|gb|GG745508.1| GENE 297 328218 - 329105 845 295 aa, chain + ## HITS:1 COG:SMa1782 KEGG:ns NR:ns ## COG: SMa1782 COG0583 # Protein_GI_number: 16263436 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 4 243 1 240 297 74 25.0 3e-13 MKTLQYSFAQIEAFATIAETGSLSQAAIRLAKDRTTLRDLLDYLEDALGYRLFSREGRSL TLTAEGEQLFRQAHLLLRQAQAFESFAQTLPQTAWQALRLVYDPFVPREFLCLLADTLAR RQIRLSCWSASRREAEQALSEGIADMAICQANNRTLGSEMEWRALGTVDLRFYAAQGLFT DAARPLTLLNLSLTPQLVMHRRSDDQIARRLQISGHTLYMNEIALLRHAMEQGMGWGFLP EHLRPGEWQGVAEIATEVGSQGLNVTMVMLWLPGMNKHRMLSDLVDEAPELWRRR >gi|289777623|gb|GG745508.1| GENE 298 329164 - 329448 481 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206577853|ref|YP_002237395.1| ribosomal L25p family [Klebsiella pneumoniae 342] # 1 94 1 94 94 189 100 3e-46 MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGEAAPVAIELDHDKLWNMQDKAEFYGEV VTLVIDGKEEKVKVQAVQRHAFKPKLTHIDFVRA >gi|289777623|gb|GG745508.1| GENE 299 329585 - 331342 2040 585 aa, chain - ## HITS:1 COG:yejH_1 KEGG:ns NR:ns ## COG: yejH_1 COG1061 # Protein_GI_number: 16130122 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Escherichia coli K12 # 1 358 1 358 358 662 89.0 0 MTFTLRPYQQEAVDATLAWFRRHTEPATIVLPTGAGKSLVIAELARLARGRVLVLAHVKE LVAQNHAKYCALGLEADIFAAGLQRKESHGKVVFGSVQSVARNLDQFHSEFSLLIVDECH RISDDDDSQYQQIISHLRQVNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQQRITPH IVSQIVEFAESRKGVMIFAATVEHAREVTGLLPAAQAALITGETPGPARDRIIEAFKAQE YRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG HREQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDALVLRCSGMA MQHGSDEKGPWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGVPLRWITP ADIIAQQALLRHPDFVVARMKGQYWQVREKVFDYQGRFRRANELR >gi|289777623|gb|GG745508.1| GENE 300 331489 - 332208 944 239 aa, chain + ## HITS:1 COG:ECs3075 KEGG:ns NR:ns ## COG: ECs3075 COG1187 # Protein_GI_number: 15832329 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 230 1 230 231 414 89.0 1e-115 MRLDKFIAQQLGVSRAIAGREIRGSRVTVDGDIVKDASFKLQPEHEVEYDGNTLTQQNGP RYFMLNKPQGYVCSTDDPDHPTILYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDGQWSHR ITSPRHHCEKTYLVELESPLAEGTAELFAKGVQLHNEKDLTKPAVLEVITPTEVRLTISE GRYHQVKRMFAAVGNHVVGLHRERIGDILLDDALAPGEYRPLTETEIASVGAPQARSKT >gi|289777623|gb|GG745508.1| GENE 301 332205 - 333401 1567 398 aa, chain + ## HITS:1 COG:STM2221 KEGG:ns NR:ns ## COG: STM2221 COG0477 # Protein_GI_number: 16765550 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 395 1 395 396 566 85.0 1e-161 MTVKQNSSLGIVFILGLLAMLMPLSIDMYLPALPVIAAQYNVPDGSAQMTLSTYILGFAL GQLLYGPMADSLGRKPVILGGTLVFAAAAVACALSQTIDMLIVMRFFHGLAAAAASVVIN ALMRDIYPKDEFSRMMSFVMLVTTIAPLVAPMVGGAVLVWFSWHAIFWILALVALLASLM IGLFIRETLPADRRQPFHLRTTLGNFATLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY ININHVAPQHFGYYFALNIVFLFLMTMFNSRFVRRVGALRMFRAGLWIQFAMAVWMVVCA LLDVGFWSLVIGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIIGAL LSMATFTTAWPMLISIAFCATCSIFFSLYASRRRKIAH >gi|289777623|gb|GG745508.1| GENE 302 333732 - 334076 382 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1446 NR:ns ## KEGG: Kvar_1446 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 231 100.0 6e-60 MNTQQLSIVHRLPQSYRWLAGFAGSRVEPIPQNGAQNENSLVALKLLSPDGEKAWPVMHK LSQALSDIEVDCSVLECEGEPCLFVNLQDEFAATCRLKNFGVAIAEPFSGNNPF >gi|289777623|gb|GG745508.1| GENE 303 334080 - 335669 301 529 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 301 526 16 239 245 120 31 2e-25 MTHPLLAIDNLSIAFRQQGETQTVVHNLSLEVAVGETLALVGESGSGKSISALSVLRLLP TPPASYPSGDIRFHGQSLLHADESTLRGVRGNRIAMIFQEPMVSLNPLHTLEKQLYEVLS LHRGMRKEAARGEILDCLERVGIRQAPRRLADYPHQLSGGERQRVMIAMALLTRPELLIA DEPTTALDVSVQAQILQLLRELKRELNMGLLFITHNLSIVRQLADRVAVMQNGRCVEQND CRALFSAPAHPYTQRLLDSEPDGEPVPLAIDAPVLLQADDLNVAFPVRKGILRRVVDHHR VVNSLSFQLRAGETLGLVGESGSGKSTTGLALLRLISSEGKITFAGQPIQGRNRRQLLPL RRQMQVVFQDPNSSLNPRLTAQQIIEEGLRVHQPTLTAAEREQAVILAMQEVGLDPASRQ RYPAAFSGGQRQRIAIARALIVKPQLIVLDEPTSSLDKTVQAQILNLLKALQQKHQLAYI FISHDLRVVRALCHQVMVLRQGEVVEQGECQSVFSAPRHEYTRQLLALS >gi|289777623|gb|GG745508.1| GENE 304 335671 - 336696 1246 341 aa, chain - ## HITS:1 COG:STM2218 KEGG:ns NR:ns ## COG: STM2218 COG4239 # Protein_GI_number: 16765547 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 341 1 341 341 558 85.0 1e-159 MSFFSPVNQARWARFRHNRRGYWSLWLFLILFFCSLGAELLANDRPLLVQYRGQLYVPVL KNYTEQTFGGAFATAADYQDPWLQHQLSTHGWALWPPVRFGATTINFASTVPFPSPPSAS NWLGTDANGGDVLAWILYGTRISVLFGLLLTLFSSVLGVLAGAIQGYYGGKIDLWGQRFI EVWSGMPTLFLIILLSSVVQPGFWWLLAITVLFGWMTLVGVVRAEFLRTRNYDYIRAAQA LGVSDRQIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQG KNNLQAPWLGIAAFLSVAVLLTLLIFIGEAVRDAFDPSKAV >gi|289777623|gb|GG745508.1| GENE 305 336696 - 337790 1804 364 aa, chain - ## HITS:1 COG:STM2217 KEGG:ns NR:ns ## COG: STM2217 COG4174 # Protein_GI_number: 16765546 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 364 1 364 364 632 90.0 0 MGSYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGQHGGMPGAGDGGMGA SHARTGAGNISEGHYRGGRGLDPEVIAEITHRYGFDKPLHERYLKMLGDYLRFDFGDSLF RSASVLQLIKDSLPVSVSLGLWSTLIIYLVSIPLGIRKAVSNGSRFDIWSSTLIIIGYAI PAFLFAILLIVIFAGGSYFDLFPLRGLVSPNFDTLPWYQKILDYLWHITLPVLATVIGGF AALTMLTKNSFLDEIRKQYVVTARAKGVGEKQILWGHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRID FEGR >gi|289777623|gb|GG745508.1| GENE 306 337800 - 339605 1866 601 aa, chain - ## HITS:1 COG:STM2216 KEGG:ns NR:ns ## COG: STM2216 COG4166 # Protein_GI_number: 16765545 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 601 1 601 601 973 79.0 0 MYARLFLILLALFSLSAKAQTIKESVAFAIIGEPKYAASFSHFDYVNPEAPKGGTLTLAA IGTFDNFNRYALRGNPAVRTEALYDTLFTTSDDEPGSYYPLIAERARYAEDYSWVEIALN PHARFHDGTPITARDVAFTFNKFMTEGVPQFRLFYKGTTVKAIAPLTVRIDLGQPGKENM LSLLSLPVMPESFWRQHKLSDPLSKPPLASGPYRISAWRMGQYITYSRVADYWAADLPVN RGRWNFDTLRYDYYLDDNVAFEAFKAGAVDRREETVAKNWATRYVGRNFSRGYIIKDEHT NTSAQDTQWLAFNIQRPVFADRRVREAITLAFDFEWMNKALFYSAYQRANSYFQNTEYAA RSLPDAAELALLTPMKNELPPEVFSQVYQPPVSRGDGFDRDNLLKADALLNAAGWTVKNQ RRVNAATGKPLRFELLMPAGGNDRWVLPFQHNLQRLGIVMDIRQVDNSQYSNRRRSRDYD MMPSLWRAMPWPGTDLQISWASDYIHSSYNAPGVQSPVVDKLIAQILQLQGNKQKLIPLG RALDRVLTWNNYMLPMWYMAQDRTAWWNKFSFPETRPIYSSGLDTWWYDVNKAATLPADR R >gi|289777623|gb|GG745508.1| GENE 307 339674 - 341236 1564 520 aa, chain - ## HITS:1 COG:STM2215_2 KEGG:ns NR:ns ## COG: STM2215_2 COG2200 # Protein_GI_number: 16765544 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 261 514 1 254 258 358 65.0 1e-98 MLTRYFSPQRKIWLTSLCVGIIVALLAGCIQFMVIYHNRAERFDAIINNVDTYLKSYFHD LRETIDGLQPLVDQPCENIDSGLTSHAAFSPNVRAFLLVKNGVVFCSSATGAMNTPLTQL IPAIDIRKPVDMAILPGTPMMPKSAALALWVSKPDDANSGIFVSINANLTPYILYSARQN DFSGIALAIGHTAISTFSNRLVDPQTLHNEPIRQVQIDGLPLKVYLYANSWLAENTQFAL LLGVVCGLLAGLLCYYVLTIKSDPRKSILLGIKNNQFYVVYQPVVNAQTLRISGVEVLMR WRHPVVGEIPPDVFINLAETQQMIVPLTHHLLALIASDGQVLKRILPRGVKLGLNISPAH LQADSFRDDMLRFAAALPADHFHVVLEVTERAMIDKEKSIANFAWLHQQGFEIAIDDFGT GHSALIYLERYNFDYLKIDRGFVQAIGTETVTSPVLDAVLTLSRRLKLMTVAEGVETQEQ AEWLRAQGVNFLQGYWISRPLSLEALVAAHDEPANYFTTR >gi|289777623|gb|GG745508.1| GENE 308 341425 - 341994 357 189 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 66 185 58 174 175 142 56 7e-32 MVKSQPILRYILRVAPAIAVAVLLSACSSTSTARNMHSETHAVGSGDLSSLQASQDEFET MVRNLDVKSRLMDQYASWKGVRYRLGGSTRKGIDCSAFVQRTFREQFGLELPRSTSEQQE TGKSISRTQLRTGDLVLFRAGSTGRHVGIYLGNNQFVHASTSSGVTISSMDEPYWKKRYN EARRVLSRS >gi|289777623|gb|GG745508.1| GENE 309 342421 - 343128 705 235 aa, chain - ## HITS:1 COG:ECs3066 KEGG:ns NR:ns ## COG: ECs3066 COG0671 # Protein_GI_number: 15832320 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 230 13 241 249 312 67.0 3e-85 MMKNRIPLILLLNIAGVALFCSWYLPVNHGAWSPVDSAIFHFFNHGVSVSHAYAWLLAII NNRAFDACSLLAMGCLMLRYWLKAPPAGRRQIAIMGLVMLLAAVIINQLAQHLMPVQRAS PSLFFHDVTRVSDVVNFPTKDASKDSFPGDHGMMLLIFASFMWRYFGRRALTVALVIFVV FAFPRVMIGAHWFSDIAVGSLTAVLIGAPWVLMTPLSDKLIALFDRSLPGGISAK >gi|289777623|gb|GG745508.1| GENE 310 343172 - 344149 774 325 aa, chain - ## HITS:1 COG:yeiR KEGG:ns NR:ns ## COG: yeiR COG0523 # Protein_GI_number: 16130111 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli K12 # 1 325 1 325 328 531 81.0 1e-151 MTRTNLITGFLGSGKTTSILHLLAQKPADEKWAVLVNEFGEVGIDGALLADSGALLKEIP GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDILTAAVYEPWIDLRATV CILDPRQLLDEKVVNNDNFRDQLAAADIIVANKNDRETPESAHALADWWQRWGGDRRKVS TTQGNIDLALLDEPRRNTAPLPASAEHVHHSRPTSGLAALSLPEHQRWRRHLNSGQGYQA CGWIFDAETVFETIGLLEWARLAPVARVKGVMRIAEGAVRINRQGEDWHIETLSVPPPDS RIELISANEADWNALQTSLLRLRLS >gi|289777623|gb|GG745508.1| GENE 311 344270 - 345736 1713 488 aa, chain - ## HITS:1 COG:yeiQ KEGG:ns NR:ns ## COG: yeiQ COG0246 # Protein_GI_number: 16130110 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 486 1 486 488 787 77.0 0 MTTIATATLPENVQRPQYDRSQLRSRIVHFGFGAFHRAHQALLTDRVLNNVGGDWGICEI SLFSGDTLMSQLREQDHLFTVLEKGADGNQPIVIGAVHECLNARLDSLAAIIEKFCEPQV AIVSLTITEKGYCIDPATGKLDPTHPRIVHDLENPTLPQSAPGILVEALARRRDRGLPPF TVLSCDNIPDNGHVVKNAVLGMAEKRSPALANWIADNVSFPGTMVDRIVPAATAESLAEI AAVLGVDDPCAISCEPFIQWVVEDHFVAGRPAWETAGVQMTDDVLPWEQMKLRMLNGSHS FLAWLGYLAGHAHVSDCMQDNVFRRAARQLMLDEQAPTLTITGVDLEAYADSLIDRFSNP ALKHRTWQIAMDGSQKLPQRMLDGIRVHLERSRRWPLLALGVAGWMRYVSGTDDTGQTID VRDPLVDKIQQRVAQSDEQQRVDALLGLEEIFGRDLPHNAQFVAGIRAAWQQLATHGARE AVARALNS >gi|289777623|gb|GG745508.1| GENE 312 345944 - 347134 1503 396 aa, chain + ## HITS:1 COG:YPO1283 KEGG:ns NR:ns ## COG: YPO1283 COG1312 # Protein_GI_number: 16121566 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Yersinia pestis # 1 395 1 395 397 723 85.0 0 MEQTWRWYGPNDPVSLDDVRQAGATGVVTALHHIANGQVWPVEEIKARQALLAAKGLTWS VVESIPVHEDIKTHSGEYATWIANYQQSIRNLAACGIDTVCYNFMPILDWTRTDLEYELP DGSRALRFDQIAFAAFELHILKRPGAEGDYSEEEQRQAEVYFKAMSEADIEKLTRNIIAG LPGAEEGYTLDQFRARLAEYDHIDKAQLRENMAYFLRAIVPVCEEVGIRLAVHPDDPPRP ILGLPRIVSTIEDMQWLKETVDSINNGFTMCTGSYGVRADNDLVKMVETFGDRIHFTHLR STCREANPKTFHEAAHLSGDVNMVAVVDAILREEQRRKQAGDLRPIPFRPDHGHQMLDDL RKKTNPGYSAIGRLKGMAEVRGVELALKMTKYPELL >gi|289777623|gb|GG745508.1| GENE 313 347916 - 348488 824 190 aa, chain - ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 362 92.0 1e-100 MPRANEIKKGMVLNYNGKLLIVKNIDIQSPSARGAATLYKMRFSDVRTGLKVEERFKGDD IVDTVTLTRRFVDFSYVDGNEYVFMDKEDYTPYTFTKEQIEEELQFIPEGGMPDMQVLTW DGQLLALELPQTVDLEIIETAPGIKGASASSRTKPATMSTGLVIQVPEYLTTGEKIRIHI EECRYMGRAD >gi|289777623|gb|GG745508.1| GENE 314 348702 - 348890 192 62 aa, chain + ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 62 23 84 84 66 58.0 1e-11 MPQGKPANTRCIQLSEHNLCLIFGSPLRPKVCASLQPSPEMCFTHRDDAITWLLDLELAT AP >gi|289777623|gb|GG745508.1| GENE 315 348893 - 349807 1007 304 aa, chain - ## HITS:1 COG:yiaU KEGG:ns NR:ns ## COG: yiaU COG0583 # Protein_GI_number: 16131456 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 3 298 10 306 324 196 38.0 4e-50 MDELRIICAIAETASVSRAAQRLNMPQSNVSRTLTSVERKVGLAIFLRTARELVRTEFGE QFIHASRAVLEQHEQLINLADRYKNTLQGVVTLGAPIGIHQFLGRYILPALRKTLPELQI NLVTRNASEREQKYGAIFNSDCDLLISPFKPQNENLIARPFTRFRTGVFASPDYLAQHPI AEPEALVDHECITLRMLGGSDNIWTFKSKNGEPLNLTVKGGFVCDNTLPAVELAKLGMGI VYAPYYSLATELAAGQLVPCLKKERCIDLQAWLIFQRRDILPLRVQALLDGLSAHIKNLS HLLL >gi|289777623|gb|GG745508.1| GENE 316 350039 - 350383 211 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1460 NR:ns ## KEGG: Kvar_1460 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 215 100.0 5e-55 MLLNYFALFVLILVFLILFYGVIIIHDIPYHIAQKRQHPHQDAIHVAGWISLFTLHAIWP FLWIWATLYRPDRGWGMASQTEDSLQRKELEQRIALLEAALKNSQQASAGNKDK >gi|289777623|gb|GG745508.1| GENE 317 350523 - 351521 1369 332 aa, chain + ## HITS:1 COG:yiaV KEGG:ns NR:ns ## COG: yiaV COG1566 # Protein_GI_number: 16131457 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 332 47 378 378 382 56.0 1e-106 MNYNHPYTLRAQKIVVSIPMVPQVSGEVVEVTSKTNVLMKKGELLFRIDDTRYRARLNKL KADLAAGEAMLRAKQATIDDASARVQQAQAEYDRVTRDYQRYAQGAAMPVNPFSEQDVTH ARQQVQIQTAVLQAAKAQLQNAREQVSGRYNGLDANIASLKSQILEAEYNLAQTVVRAPS DGYVTQLLARPGMTAVRLPFKPVLVFIPQQKRQVVAVFRQNSVLRLTAGDSAEVVFNGLP GSVYSGKVSRVLPAIPDGSYQASGALQGLSAGAGKEGIYVLIDLDPHPEVEHLPDGVSAQ AAVYTDYFAHVSIMRKVLLRMTSWLHYLYLDH >gi|289777623|gb|GG745508.1| GENE 318 351556 - 352737 1497 393 aa, chain - ## HITS:1 COG:ECs3062 KEGG:ns NR:ns ## COG: ECs3062 COG0477 # Protein_GI_number: 15832316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 587 81.0 1e-167 MQNRSAALPRRGFDVTSSAFLIVAFLTGIAGALQTPTLSLFLTNEVHVRPAMVGFFFTGS AVIGILVSQFLAGRSDRRGDRKQLIVVCCLLGVLACLLFAWNRNYFILLFIGVFLSSFGS TANPQMFALAREHADKTGREAVMFSSILRAQVSLAWVIGPPLAYALAMGFGFTAMYLSAA AAFIVCGIMVWLFLPSMHKAAAVATGRLEAPRTHRRDALLLFSICTLMWGTNSLYIINMP LFIINELHLPEKLAGLMMGTAAGLEIPTMLIAGYYARRFGKRFLMRLSAVAGVLFYVGML TVHTPALLLAMQVLNAVYIGILAGIGMLYFQDLMPGQAGAATTLYTNTTRVGWIIAGSLA GVVAEIWSYHAVFWIALVMGITAQVCLWRIRDV >gi|289777623|gb|GG745508.1| GENE 319 353072 - 354202 1613 376 aa, chain + ## HITS:1 COG:fruB_1 KEGG:ns NR:ns ## COG: fruB_1 COG4668 # Protein_GI_number: 16130107 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Escherichia coli K12 # 1 286 1 286 286 397 83.0 1e-110 MFQLSVQDIHPGQQAGNKEEAIRQVAAALVSAGNVADGYVNGMLAREQQTSTFLGNGIAI PHGTTDTRDQVLKTGVQVFQFPQGVTWGEGQTAYVAIGIAASSDEHLGLLRQLTHVLSDD AVAAQLQSATTAEELRALLMGEKQSEALKLDNETLSLDVAASDLLTLQALNAARLKEVGA ADTAFVSHAINDTPLNLGQGVWLNDSAEGNLRSAVAVSRAANAFTRDDQPVSLLVTVAMA DEQPTAVLNRLSKLLLDKKADRLLKADAATVLALLTSDDAIAEDVLSAEFVVRNEHGLHA RPGTMLVNTIKQFSSDITVTNLDGSGKPANGRSLMKVVALGVKKGHRLRFTAQGEDAQQA LDAIGEAIAAGLGEGA >gi|289777623|gb|GG745508.1| GENE 320 354203 - 355141 1231 312 aa, chain + ## HITS:1 COG:ECs3060 KEGG:ns NR:ns ## COG: ECs3060 COG1105 # Protein_GI_number: 15832314 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 595 97.0 1e-170 MSRRVATITLNPAYDLVGFTPEIERGEVNLVRTTGLHAAGKGINVAKVLKDLGIDVTVGG FLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPGDWER FVNDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAA PWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGEEGALWVNASGEWIA KPPSVEVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRTQLA AMMARVDLQPFN >gi|289777623|gb|GG745508.1| GENE 321 355158 - 356852 2508 564 aa, chain + ## HITS:1 COG:STM2204_3 KEGG:ns NR:ns ## COG: STM2204_3 COG1299 # Protein_GI_number: 16765534 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 225 557 1 333 338 500 92.0 1e-141 MKTLLIIDAGLGQARAYMAKTLLGAAAPKAHLELIDNPNDAELVIVLGAALPTDSALNGK QVYLGDINRAVAHPELFLSEAKGHATPYAAPAAAAAPAATGGPKRIVAVTACPTGVAHTF MAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAEADLVIVAADIEVDLAKFAGKPM YRTTTGLALKKTAQELDKAVAEAKPYQPSGKPQAAGEGKKESAGAYRHLLTGVSYMLPMV VAGGLCIALSFAFGIKAFEVKDTLAAALMQIGGGSAFALMVPVLAGFIAFSIADRPGLTP GLIGGMLAVSGGSGFIGGIIAGFLAGYVAKAISTKLKLPQSMEALKPILIIPLVSSLIVG LAMIYLIGKPVAGILAWLTHWLQTMGTANAVLLGAILGAMMCTDMGGPVNKAAYAFGVGL LSTQTYAPMAAIMAAGMVPPLAMGIATLVARNKFDKGQREGGKAALVLGLCFISEGAIPF AARDPMRVLPCCIVGGAVTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLLAIVAGT LVAGLSYAVLKRPEAQVVDVEKAA >gi|289777623|gb|GG745508.1| GENE 322 356905 - 357759 1157 284 aa, chain - ## HITS:1 COG:ECs3051 KEGG:ns NR:ns ## COG: ECs3051 COG0648 # Protein_GI_number: 15832305 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Escherichia coli O157:H7 # 1 279 1 279 285 516 88.0 1e-146 MKYVGAHVSASGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLNDETIAEFKAACEKYH FGPGQILPHDSYLINLGHPVEEALEKSRDAFIDEMTRCQQLGLTLLNFHPGSHLQQIPEE ACLARIGESINIALAKTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRSAEACEKTFADFERIVGFQYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG HDCFRWIMQDSRFDGIPLILETINPDIWAEEIAWLRAQQIAEVA >gi|289777623|gb|GG745508.1| GENE 323 357831 - 358880 1517 349 aa, chain - ## HITS:1 COG:STM2202 KEGG:ns NR:ns ## COG: STM2202 COG2855 # Protein_GI_number: 16765532 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 349 1 349 349 509 86.0 1e-144 MTALTLPTKHRSLWHFVPGLALTAALTGAALWAGSFPAIAGAGFSALTLAILFGMVVGNT VYPKIWQPCDGGVIFAKQHLLRLGIILYGFRLTFAQIADVGVSGILIDVLTLSSTFFIAC FLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTIAIFL YPAMYPLLAHWFTPETYGIYMGSTMHEVAQVVAAGHAVSPDAENAAVIAKMLRVMMLAPF LLFLAARVKQLTPAGNGEKSKITIPWFAIMFILVAVFNSFHLLPKAVVDMLVTLDTVLLA MAMAALGVTTHVSALKKAGAKPLLMALMLFVWLIVGGGVINVAIHSLMA >gi|289777623|gb|GG745508.1| GENE 324 359146 - 360012 928 288 aa, chain + ## HITS:1 COG:STM2201 KEGG:ns NR:ns ## COG: STM2201 COG0583 # Protein_GI_number: 16765531 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 478 84.0 1e-135 MHITLRQLEVFAEVHKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN EHGRLLYPRALALLERALEIEQLFRGDNGAIRVYASSTIGNYIMPEIIARYRHDFPELPV ELSVGNSLDVINAVADLRVDFGLIEGPCHAADIIAEPWLEDELVVFAAPDSPLLAGEVTL QQLAEAPWILREHGSGTREIVDYVLLSHLPAFHMGMELGNSEAIKHAVRHGLGISCLSRR VIAEQLASGTLAELKVPLPRLTRTLWRIHHRQKHISKALQRFLQYCQV >gi|289777623|gb|GG745508.1| GENE 325 360190 - 361659 2075 489 aa, chain + ## HITS:1 COG:lysP KEGG:ns NR:ns ## COG: lysP COG0833 # Protein_GI_number: 16130094 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 489 1 489 489 860 93.0 0 MVSETKTTEAPTLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGL MVYFLMTSLGELAAFMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVASQLV MSYWFPDTPGWIWSALFLGIMFLLNWISVRGFGEAEYWFSLIKVATVIIFIIVGVMMIVG IFKGSQPTGWSNWGIADAPFAGGFSAMIGVAMIVGFSFQGTELIGIAAGESEDPEKNIPR AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAIM NAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFSKLSRGGVPRNALYATTVIAALCF LTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVMQGNDINNLPYRSGFFPLG PIFAFVLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLVIWFGYKLAKGTRFVRYSE MTFPDRFKR >gi|289777623|gb|GG745508.1| GENE 326 361775 - 362227 -205 150 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLTPLRLSPSLVSWTPGTSRSTSFRFWTGLRCKSCWVMTLMLAGASLTLCSVAEAVTTSV SSFTSARAGNANDTTDADNPARIKGFNLNIPNLHGVYNQTNKKVLLTRAGGLSLCRRHAR AVFSSMWLVARCQSDPMAETGSGFIRNGRK >gi|289777623|gb|GG745508.1| GENE 327 362395 - 363933 2067 512 aa, chain + ## HITS:1 COG:STM2199 KEGG:ns NR:ns ## COG: STM2199 COG4771 # Protein_GI_number: 16765529 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 9 512 155 663 663 815 78.0 0 MRSAAWSTLLPKKIGQKWTGTLSADTTIQEHRDRGDTWNGQFFTSGPLIDGVLGMKAYGS LAKRAKDDPQSSSSATGETPRIEGFTSRDGNVEFAWTPGENHDFTAGYGFDRQDRDSDSL DRNRLERENYSLSHNGRWDMGNSELKFYGEKVDNKNPGQNGTITSESNAIDGKYVLPLDM INQLVTFGGEWRHDKLKDPVNLSSGGQSTSASQYALFIEDEWRIIEPLALTTGIRMDDHQ TYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLNPDWTTNSCRGSCSIIGNPDLK PETSESFELGLYYRGEEGWLQDVEGSITTFQNNVDDMIDVLRTSSASEAPGYPNFVGWKT VNGKRVPIFRYFNVNKARIKGVETEVKIPFGDEWKLTMNYTYNDGRDLSNGGDKPLQTLP FHTANGTLDWKPLDDWSFYVTANYTGQQRAVSATGKTPGGYTLFDVGAAWQVTKNVKLRS GVQNVGDKDLSRDDYSYTEEGRRYFMAVDYRF >gi|289777623|gb|GG745508.1| GENE 328 364004 - 364837 902 277 aa, chain - ## HITS:1 COG:yeiG KEGG:ns NR:ns ## COG: yeiG COG0627 # Protein_GI_number: 16130092 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 276 1 277 278 468 81.0 1e-132 MELLEEHRCFDGRQQRWRHHSPVLNCAMTFSIFLPPERETPPPVLYWLSGLTCNDENFTT KAGAQRIAAELGIALVMPDTSPRGDEVANDDGYDLGQGAGFYLNATEAPWAAHYRMYDYL RDELPALIRSEFSVGERCAISGHSMGGHGALVMALKNPGRYASVSAFAPIVNPGQVPWGK KAFTAYLGADESTWQSWDSCALMQASQPADAVPTLIDQGDNDPFLAGQLQPAVLAETARQ KAWPLTLRIQPGYDHSYYFIASFIEDHLRFHAQHLFA >gi|289777623|gb|GG745508.1| GENE 329 365198 - 365866 936 222 aa, chain + ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 384 93.0 1e-107 MSSLSKEAVLVHEALVARGLETPMRAPVQEIDNETRKRLITGHMTEIMQLLNLDLSDDSL METPHRIAKMYVDEIFSGLDYSRFPKITVIENKMKVDEMVTVRDITLTSTCEHHFVTIDG KATVAYIPKDAVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTSNVAVSIDAVH YCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHN >gi|289777623|gb|GG745508.1| GENE 330 365882 - 367039 1449 385 aa, chain + ## HITS:1 COG:Z3408 KEGG:ns NR:ns ## COG: Z3408 COG2311 # Protein_GI_number: 15802708 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 385 44 428 428 544 78.0 1e-154 MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWSGSATLSDAWTWALLDLLAQVK FLTLFALLFGAGLQLLLPRGKRWIQSRLTLLALLGFIHGLFFWDGDILLAYALVGLVSWR MVREAHHVKSLFNTGVVLYLIGIAVLVLLGVISGTAANRSWVPDAANLQYEQYWKLHGGM EAVSNRADMLSDNLLALGAQYGWQLAGMMLMGAALMRSGWLKGQFSLRHYRRTGALLVVA GMAVNLPAIFAQWYLAWDYRWCAFLLQAPRELSAPLQAIGYASLAWGYWPQLCRFRLVGA IACVGRMALTNYLLQTLICTTLFYHLGLFMRFDRLQLLAFVPPIWAVNLLVSSLWLRRFR QGPVEWLWRQLTLRASGTSLKDTSR >gi|289777623|gb|GG745508.1| GENE 331 367195 - 368217 1477 340 aa, chain + ## HITS:1 COG:STM2191 KEGG:ns NR:ns ## COG: STM2191 COG1609 # Protein_GI_number: 16765521 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 340 1 340 340 572 86.0 1e-163 MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMKAVTQLGYRPNANAQALATQVSD TIGVVVMDVSDAFFGALVKAVDTVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCSALI VHSKALSDDELSDFMQHIPGMVLINRIVPGFAHRCVGLDNVSGALMATRMLLNHGHQRIG YLSSNHGIEDDDMRREGWSKALQEQGIIAPDSWVGSGSPDMQGGEAAMVELLGRNLGLTA VFAYNDSMAAGALTTLKDNGIVVPQHLSLIGFDDIPISRYTDPQLTTVRYPVMSMAKLAT ELALLGAAGKLDREATHCFMPTLVRRHSVAQRQTVGPITN >gi|289777623|gb|GG745508.1| GENE 332 368514 - 369512 1472 332 aa, chain + ## HITS:1 COG:STM2190 KEGG:ns NR:ns ## COG: STM2190 COG1879 # Protein_GI_number: 16765520 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 332 1 332 332 567 93.0 1e-161 MNKKVFTLSAVMAGLLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDGKSAPDVQLL MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNIPVVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGDLIAKHWKANPNWDLNKDGQIQFVLLKGEPGHPDAEA RTTYVIKELNDKGLKTQQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG AVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLAEGKE AAAGTNWKIDNKIVRVPYVGVDKDNLSQFTGK >gi|289777623|gb|GG745508.1| GENE 333 369631 - 371151 195 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 279 482 17 215 245 79 25 4e-13 MVSNNSERSGEYLLEMTNINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLF GIYQKDSGSILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF VDQDKMYRDTKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYDAKIVIMDEPTSSL TEKEVNHLFKIIRKLKDRGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLEGLDMDK IIAMMVGRSLNQRFPDRENTPGEVILQVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKASGTITLHGKKINNHSANEAINHGFALVTEERRSTGIYAYLDIGF NSLISNIKKYKNSIGLLDNSRMKSDTQWVIDSMRVKTPGQHTQIGSLSGGNQQKVIIGRW LLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMS NGLVAGIVETKTTTQNEILRLASLHL >gi|289777623|gb|GG745508.1| GENE 334 371167 - 372177 1693 336 aa, chain + ## HITS:1 COG:STM2188 KEGG:ns NR:ns ## COG: STM2188 COG4211 # Protein_GI_number: 16765518 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 473 94.0 1e-133 MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVIAATMLQAVDNANKVFPDMATMPIPLVILLVCAIGAVIG LINGIVIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSHFSHFAQGFVALGS FRLSYITFYALIAVFFVWILWNKTRFGKNIFAIGGNPEAAKVSGVNVALNLLMIYALSGV FYAFGGLLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVFGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK >gi|289777623|gb|GG745508.1| GENE 335 372219 - 372455 290 78 aa, chain - ## HITS:1 COG:VC0814 KEGG:ns NR:ns ## COG: VC0814 COG1396 # Protein_GI_number: 15640832 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Vibrio cholerae # 1 77 77 153 159 97 59.0 7e-21 MLGAISQGEALKKLRVEVLGLRQDEYARLVDVSRKTLSDVENDKGNYSAEIINKIYKPFG LETGLVPISKTLISSLFK >gi|289777623|gb|GG745508.1| GENE 336 372662 - 372934 82 90 aa, chain - ## HITS:1 COG:VC0815 KEGG:ns NR:ns ## COG: VC0815 COG3550 # Protein_GI_number: 15640833 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Vibrio cholerae # 1 90 367 456 456 102 52.0 1e-22 MKADPEGIPRTMKWSLACESGGEYNFGAIAQALAEWITPDTLLNALSETASQLVDLPSRL KVRGVPVQILEMPSIGFKFIPDKLARWGLL >gi|289777623|gb|GG745508.1| GENE 337 373245 - 373766 275 173 aa, chain - ## HITS:1 COG:VC0815 KEGG:ns NR:ns ## COG: VC0815 COG3550 # Protein_GI_number: 15640833 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Vibrio cholerae # 1 156 4 159 456 209 60.0 2e-54 METLTVQAFLNAEWQDIALIQFPGSEQGDWFTTQIDYLTDYAIDFLERDDYHAVSLNHPV SLYFEDHGNPGWLRFIDDIIPSGASRRYWVNFLDISELPQGQQNFILLKFGTMSPVGNLR IKDSVPDWDSLASSKTFSVTDVMNRASDFLDYDQERGAAAGGATLSLSLVAAI >gi|289777623|gb|GG745508.1| GENE 338 373881 - 374612 1073 243 aa, chain - ## HITS:1 COG:STM2184 KEGG:ns NR:ns ## COG: STM2184 COG2949 # Protein_GI_number: 16765514 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 1 236 1 235 239 417 93.0 1e-116 MLKRVFYSLLVLLGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTG VINQYYRYRIQGALNAYNSGKVNYLLLSGDNALQSYNEPMTMRRDLIKGGVDPADIVLDY AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMWSVRL REFGARFGALADLYIFKREPRFLGPLIPIPAQQHDVPDDAQSYPAVTPEQLLELQKNTKP ANE >gi|289777623|gb|GG745508.1| GENE 339 374889 - 375773 1080 294 aa, chain - ## HITS:1 COG:STM2183 KEGG:ns NR:ns ## COG: STM2183 COG0295 # Protein_GI_number: 16765513 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 450 82.0 1e-126 MHSRFQAALTTLAADLQAAIAPMLADPHFPALLEADQVATLQQATGLDEDALAFALLPLA AACARADLSHFNVGAIARGVSGRWYFGGNMEFLGATMQQTVHAEQSAISHAWLRGETSLR AITVNYTPCGHCRQFMNELNSGLALRIHLPGREAHALEHYLPDAFGPKDLEIKTLLMDAQ DHGFPVSGDALTQAAIQAANCCHAPYSHSPSGVALELKDGTIFSGSYAENAAFNPTLPPL QGALNLLSLNGYDYPAIQRAILAEKADAALIQWDATVATLKALGCQNIERVLLG >gi|289777623|gb|GG745508.1| GENE 340 375902 - 376597 971 231 aa, chain - ## HITS:1 COG:yohK KEGG:ns NR:ns ## COG: yohK COG1346 # Protein_GI_number: 16130080 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 355 90.0 3e-98 MMHEIWWSLPLTLIVFFLARRLAARFKFPLLNPLLVAMVVIIPFLLLTGISYERYFAGSK VLNDLLQPAVVALAFPLYEQLHQIRARWKSIITICFIGSCVAMITGTTVALLMGATPQIA ASILPKSVTTPIAMAVSGSIGGIPAISAVCVIFVGILGAVFGHTLLNLMRIRTKASRGLS MGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLMAPFLFPLILAVVG >gi|289777623|gb|GG745508.1| GENE 341 376587 - 376991 500 134 aa, chain - ## HITS:1 COG:ECs3033 KEGG:ns NR:ns ## COG: ECs3033 COG1380 # Protein_GI_number: 15832287 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli O157:H7 # 1 128 1 128 132 198 88.0 2e-51 MSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWV NPGCNILIRYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHG ERKVIGQKEKKNDA >gi|289777623|gb|GG745508.1| GENE 342 377350 - 378282 303 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 2 278 38 298 353 121 33 1e-25 MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFLRVVDQLLPVKSFYRLCPELHHQSRTP SGTRVRVQLLGQYPEWLAENAARAVELGSWGVDLNCGCPSKLVNGSGGGATLLKDPELIY RGAKAMREAVPDHLPVTVKVRLGWDSGERRFEIADAVQQAGASELVVHGRTKEDGYKAER INWQAIGEIRQRLTIPVVANGEIGDWQSAQDCMAVTGCDSVMIGRGALNVPNLSRVIKYN EPRMPWPQVVQLLQKYTRLEKQGDTGLYHVARIKQWLGYLRKEYSEALTLFNEIRALQTS AEIAAAIARY >gi|289777623|gb|GG745508.1| GENE 343 378639 - 380003 1821 454 aa, chain + ## HITS:1 COG:PA3186 KEGG:ns NR:ns ## COG: PA3186 COG3659 # Protein_GI_number: 15598382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Carbohydrate-selective porin # Organism: Pseudomonas aeruginosa # 36 454 34 454 454 228 33.0 2e-59 MHNKKINQLLIGAALAAMVPAVSAAETPAWNGSVLGFEAGQQGLLGDMLGIRPILEENGF HYNLGYLNEMAYNAGGGYDHDKHLAYIDQVALTFTQDLERWTGIPDARLEGNIVNRNHDD NLTTKRLQDPRVSFNDLSQESWGGGSITRLGWLTFARSFDDRRLTWRIGMMNKVQTFDQI IPCDFQLLTQCGGKSANSLTWNNWNIHTWGTTLEYKLTPTVTLKGGVMEQNPQATARSHA WSGSTKGSKGILLPMEIETRPLMNGLPGAYNLGVVWTNAPQTDLYSGKSGGVGATDPQGY AEHDSTWFMYAGLNQQITRHADDPLRGMSVSLSGSLSDQRSNYIHSAVAASMRYRGLFDA RPEDWIGFGLTWIDMSSHYARNQRYMNQLSGATDYNDPAYQPVAGHSLNGELYYRFRPVS WLELQPGLQYWHRPGGVAQTQDAWVVEWKTVVTF >gi|289777623|gb|GG745508.1| GENE 344 380159 - 380992 1035 277 aa, chain + ## HITS:1 COG:bglG KEGG:ns NR:ns ## COG: bglG COG3711 # Protein_GI_number: 16131591 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 275 3 277 278 336 62.0 3e-92 MQIAKVLNNNVVVVLDEHRREQVVMGRGLAFQKRPGDVLDDSKIEKVFALQSDELVGRLG ELLSQIPLEVMTTCDRIIDLARGRLGKLQESLYITLTDHCHFAIERQKKGIALRNVLLWE IKRLYPKEFALGQEARAIIAKRLGVELAEDEAGFIALHLVTAQLNSEMPEVMHVTRVMQE ILQLVKYQLQLNYDEESLSYQRFVTHLKFFAQRMLTRTVVEDDDVSLHSAVKDNYAKAWK CAETVATHLQKQYQRSLTTEEIMFLAIHIERVRKEGR >gi|289777623|gb|GG745508.1| GENE 345 381134 - 382996 2440 620 aa, chain + ## HITS:1 COG:bglF_2 KEGG:ns NR:ns ## COG: bglF_2 COG1263 # Protein_GI_number: 16131590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 96 450 3 361 361 416 58.0 1e-115 MEYKALAQDILNRVGGKENIVSLVHCATRLRFKLKDNGKADAEGLKANPGVIMVVESGGQ FQVVIGNHVHDVWLAVRQEAGLSDDSEPVAGEKAAKGSVLSQLIDIISGIFTPFIGVMAA TGLLKGLLALAVTCGWLTPEQGTYKIWFAASDALFFFFPLFLGYTAGKKFGGNPFISMVI GGALTHPLMIQAFEASQAPGAAVEHFLGIPVTFINYSSSVIPIILASWVCCWLERKSNAL LPSSMKNFFTPAICLAVVVPLTFLVIGPVATWLSHLLANGYQFIYAFAPWLAGAVLGAMW QVCVIFGLHWGLVPLMINNMTVLGHDSMLPIILPAVIAQVGAVLGILLATRDARQRMLAG SAFSAGLFGITEPAIYGLTLPLRRPFIFGCIAGAIGGAITAFSNSHAYSFGVPNIFFPAQ MIPPGGIDASVWGGLIGTGVAFVLACVLTFFAGMPRASAAPGAVTVAPASANDILAPMSG SVIALEQVPDSTFASGLLGKGVAIIPAVGQVIAPFPGEVASLFQTKHAIGLQSDSGIELL IHVGIDTVKLDGVPFTAHVKEGDRVQAGDLLIEFDRQAILDAGYDLATPIIISNSDDYRE IDTVASSAVEAGQPLLSVSH >gi|289777623|gb|GG745508.1| GENE 346 383012 - 384406 2048 464 aa, chain + ## HITS:1 COG:bglB KEGG:ns NR:ns ## COG: bglB COG2723 # Protein_GI_number: 16131589 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 463 1 463 470 764 75.0 0 MKTFPADFLWGGATAANQVEGAYLEEGKGLSTSDVQPHGVFGEVVERVPGDSGIKDVAID FYHRYPEDIALFAEMGFNCLRVSIAWTRIYPNGDDAEPNEAGLAFYDKLFDEMAKHNITP LVTLSHYEMPWALVKNYGGWGSREVIGFFERYARTVFSRYKNKVKLWLTFNEINMSLHAP MTGVGLPAGSSKGEVYQAIHHQLVASALAVKACHELVPEGKIGNMLLGGLMYPLSCKPED VFETLQENRSWQFFGDVQARGAYPGYMLRFFRDNGITLTITDADREALKTTVDFISFSYY MTGCVTADEALNQQARGNILSMVPNPHLASSEWGWQIDPLGLRTLLNVLWDRYQKPLFIV ENGLGAKDKVEADGSINDDYRISYLNDHLVQAREAIDDGVELMGFTSWGPIDLVSASKAE LSKRYGFIYVDRHDDGTGTLARSKKKSFDWYKEVIASRGASLKA >gi|289777623|gb|GG745508.1| GENE 347 384440 - 385174 688 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] # 1 242 1 242 245 269 53 3e-70 MSQNIYDDPQFFAGYATLDRSVKGLDGAPEWPSLQAMLPPITGLRVVDLGCGYGWFCRWA QQQGASQITGFDISQRMLAQAREMTRGDEIVYRCADLQTLTLPANSCDLVYSSLALHYLP DIAPLFATLQQALVPGGTLVFSAEHPIYTAPLQQGWRVDDQGQKSWPVSHYQQEGERVSN WFAEGVIKQHRKLSSWINALIAAGFVLEQLDEWGPSAEQIVQQPALDEEKERPMIFLLRA RKPG >gi|289777623|gb|GG745508.1| GENE 348 385327 - 386742 1700 471 aa, chain + ## HITS:1 COG:ECs3025 KEGG:ns NR:ns ## COG: ECs3025 COG1538 # Protein_GI_number: 15832279 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 2 468 37 505 505 608 69.0 1e-174 MLAALPLAIALAGCAPSHEVANPPQQQIPASHVSMDLPAAVKNGWPQTDWWKDYHDAQLD NLIQRALANAPDMQIAEQRIRLAEAQARMSQANLGPEMDFSADVERQRMSAEGLMGPFAT DTDGNTGPWYTNGTFGLTAGWDLDLWGKNRALVKARIGELKAQVAEQAQTRELLSGSVAR LYWQWQTEAAIKAVLQQVKGEQNNIVTVDKALLQRGITNSAEGAENDINVSKTDQQLADV AGTMKEIEARLMALTNSQSQSLNLKPVSLPTVSAQLPDTLGYELLARRPDLQVAHWYIEA SLSEVDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANL DIASAQNSLSIAQYNKAVVDAVNQVAKTASQVETLMAKSQQQQQVEKDAQRVVNLAQARM AAGILPGSRVSMAKLPALQERITALRLHGQWIDASIQLTSALGGGYHQSVK >gi|289777623|gb|GG745508.1| GENE 349 386775 - 387344 840 189 aa, chain - ## HITS:1 COG:STM2170 KEGG:ns NR:ns ## COG: STM2170 COG0586 # Protein_GI_number: 16765500 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 187 10 196 198 271 75.0 8e-73 MDINHLISQYGYAALIVGSMAEGETITLLGGVAAHQGLLKFPLVVIAVALGGMIGDQLLY LVGRRFGGRILRRFASQKARIRKAQRMIQHRPWLFVIGTRFMYGFRVIGPLLIGASRLPP RIFLPLNIVGALVWALLFTTIGYLGGEVVGPWLHHLDAHLKHWIWLILAVGLVVAAHWWL RRRERKKKD >gi|289777623|gb|GG745508.1| GENE 350 387498 - 388085 776 195 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1492 NR:ns ## KEGG: Kvar_1492 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 195 1 195 195 345 100.0 9e-94 MNHVWGLFAHPNREMSVIKSENETISHHYTHHVLLMAAVPVVCAFIGTTQLGWNFGDGTV IKLSMLTGLALAVLFYAVMLAGVAIMGRVIWWMARQYPQQPSLKRCMVFAGYVATPLFLS GIVALYPLVWLCALIGTIALFYTGYLLYLGIPTFLSINREEGLSFASSTLAIGVLVLEVL LAITVVLWGYGYRLF >gi|289777623|gb|GG745508.1| GENE 351 388277 - 389224 1343 315 aa, chain + ## HITS:1 COG:STM2168 KEGG:ns NR:ns ## COG: STM2168 COG1686 # Protein_GI_number: 16765498 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Salmonella typhimurium LT2 # 1 315 1 315 315 472 83.0 1e-133 MPKFRVSLLSLTLLLAVPFAPQALAKTSAAVAASQPDIASGSAMIVDLATKKIIYASQPD LVRPMASITKVMTAMVVLDAHLPMDEMLTVDISHTPEMKGIYSRVRLNSQISRRTMLLLA LMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSVHNVSTARDLTK LLIASEQYPLIGQLSTTKEETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGH CLIMRTVINQRPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPASALSYKKQREAQM AEAMLKGGAQTAQND >gi|289777623|gb|GG745508.1| GENE 352 389584 - 390138 832 184 aa, chain - ## HITS:1 COG:SMc03840 KEGG:ns NR:ns ## COG: SMc03840 COG1247 # Protein_GI_number: 15966976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Sinorhizobium meliloti # 14 183 5 173 185 152 45.0 4e-37 MPAEAPLLDSDLEIREALPDDAHAIAALYVWHVLNGRASFEEIPPTVDEMRKRIKTVRDN GLPWLVALWRGAIVGYCYATFYRPRPAYRYTLEESIYVESGMGGRGIGSALLSRLIAECE KGPWRQMLAIIGDGHNNAGSLAIHKKFGFTVAGQLRSVGYKMGDWRDTLIMQRALGDGDW TLPE >gi|289777623|gb|GG745508.1| GENE 353 390224 - 391969 2410 581 aa, chain - ## HITS:1 COG:STM2167 KEGG:ns NR:ns ## COG: STM2167 COG0277 # Protein_GI_number: 16765497 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 572 1 572 576 1062 87.0 0 MSSAPTNTHKTFLADLARLVGPSHLLTDPAKTQRYRKGFRSGQGEALAVVFPGTLLELWR VLNACVDADKIILMQAANTGLTEGSTPNGNDYDREIVIISTLRLDKLHLLDKGEQVLAWP GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFAQID ADGKLKLVNHLGIDLGSTPEQILSRLDDERISDSDVLHDGRHAHDHDYVTRVRDVDADTP ARYNADPDRLFESSGCAGKLAVFAARLDTFPAEKRQQVFYIGTNQPQVLTEIRRHILAEF QHLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPH FTDRFMQKLGHVFPAHLPERMKTWRDKYEHHLLLKMAGDGIEEAQRWLTEYFQQAEGDFF ACTPEEGSKAFLHRFAAAGAAIRYQAVHADEVEDILALDIALRRNDTEWFEHLPPEIDSQ LVHKLYYGHFMCHVFHQDYIVKKGVDAHALKEQMLALLKARGAQYPAEHNVGHLYEAPES LQQFYRQNDPTNSMNPGIGKTSKQKYWGEAAPTPVSPADPQ >gi|289777623|gb|GG745508.1| GENE 354 392164 - 394461 3383 765 aa, chain + ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 765 1 765 765 1410 91.0 0 MKWLCTVGVAVSLALQPALADELFGNHPLTPQARDAFVTDLLKKMTVDEKIGQLRLISVG PDNPKEAIREMIKNGQVGAIFNTVTRPDIRVMQDQVMQLSRLKIPLFFAYDVLHGQRTVF PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL TTMMGQAMVESMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATADSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGVA SDPEDAVRVALKSGINMSMSDEYYSKYLPGLVKSGKVTMAELDDATRHVLNVKYDMGLFN DPYSHLGPKDSDPQDTNAESRLHRKEAREVARESLVLLKNRLDTLPLKKSGTIAVVGALA DSKRDMMGSWSAAGVADQSVTVLTGIKEALGDNGKVIYAKGANVTDDKGIVDFLNLYEKA VQVDPRSPQEMIDEAVAAAKQSDVVVAVVGEAQGMAHEASSRTDITLPQSQRNLIAALKA TGKPLVLVLMNGRPLALVKEDQQADALLETWFAGTEGGHAIADVLFGDYNPSGKLPMSFP RSVGQIPTYYSHLNTGRPYNPEKPNKYTSRYFDEANGPLYPFGYGLSYTTFSVSDVTMSS ATLPRDGSVTASVQVTNTGKREGATVIQLYLQDVTASMSRPVKMLRGFKKVNLKPGETQT VSFPIDVNALKFWNQQMKYVAEPGKFNVFIGVDSARVKQSEFELL >gi|289777623|gb|GG745508.1| GENE 355 394598 - 395515 1400 305 aa, chain + ## HITS:1 COG:STM2165 KEGG:ns NR:ns ## COG: STM2165 COG1732 # Protein_GI_number: 16765495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Salmonella typhimurium LT2 # 1 305 1 305 305 498 85.0 1e-141 MKMAMKWSGALALAALISLPLQAAEPVKVGSKIDTEGALLGNMIQQVLESHGVKTINKIQ LGTTPVVRGAIVAGELDIYPEYTGNGAFFFKDENDPAWKHAQQGYEKVKRLDQEKHQLVW LTPAPANNTWTIAVRQDLAEKNHLTSLADLSRYLKQGGEFKLAASAEFIERPDALPAFEK AYGFNLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQ PIYAPTPVVREAVLKAYPQIADWLKPVFASLDEKTLQQLNARIAVEGQDAKRVAADYLQQ KGLLK >gi|289777623|gb|GG745508.1| GENE 356 395523 - 396680 1481 385 aa, chain + ## HITS:1 COG:STM2164 KEGG:ns NR:ns ## COG: STM2164 COG1174 # Protein_GI_number: 16765494 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Salmonella typhimurium LT2 # 24 385 28 389 389 394 68.0 1e-109 MTIRCTHRVGLLLTGLLLVTLALPFITYAPNRLLSGEGRGLWQVMPWLAGVQMAAVLAGM LLCWLPGRAAPLLHLLLAELLFPLLIWGSGQAALELSRHGSPLARTSPGSGLWLSLALCM LLASEAIRHLTVRPLWRWLLNAQVWLLPIILLATGALDQLSLLKEYANRQEVFDDALRQH LLLLFGTLLPGLLIGLPLGVWLWRRPRWQAPAFTVLNVIQTIPSVALFGLLIAPLAGLAR YFPALGELGVSGTGMAPALIALTLYALLPLVRGVVTGLQQVPQDALESATAMGMSAGQRF RQVQLPLAMPVLLRSLRVVSVQTVGMAVVAALIGAGGFGALVFQGLLSSALDLVLLGVVP TIALAVVVDALFALWGAWLKGEAND >gi|289777623|gb|GG745508.1| GENE 357 396673 - 397620 1389 315 aa, chain + ## HITS:1 COG:STM2163 KEGG:ns NR:ns ## COG: STM2163 COG1125 # Protein_GI_number: 16765493 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 312 1 312 315 478 78.0 1e-134 MIEFEGVSKVFAGHPAVKDLTLELREGAFSVLVGTSGSGKSTTLKMINRLLEPDRGTIRF AGEDIRQQPVLTLRRRMGYAIQSIGLFPHWTVAQNIATVPQLQKWPRARIADRVDELMAL LGLEATLRDRYPHQLSGGQQQRVGVARALAADPEVLLMDEPFGALDPVTREALQQEMLRI HRLLGRTIVLVTHDIDEALRLADHLVLMDGGEVVQQGAPLEMLLRPKNSFVQTFFGRSEL GVRLLSLREVGDYLRPGERLAGEGLTVTMTLREALSQFVARRCEALPVVDAEGRPCGTLH FADLLRQEASHEGAS >gi|289777623|gb|GG745508.1| GENE 358 397604 - 398341 1010 245 aa, chain + ## HITS:1 COG:ECs3015 KEGG:ns NR:ns ## COG: ECs3015 COG1174 # Protein_GI_number: 15832269 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 241 1 241 243 295 76.0 5e-80 MKALREPLWWLIALFIGLLVGLPYSAPLFSRLFPELPRPVYQQESFWALTLDHGWLVVAS SLAATAVGLAAGIAVTRPAGSAFRPLVETIAAIGQTFPPVAVLAMAVPVLGFGWLPALIA LALYGILPVLQGTLAGLGSIPSGVSGVAEGMGMSGWQRLYKVELPLAAPVILAGIRTSVI VNIGTATIASTVGASTLGTPIIIGLSGFNTAYIVQGALLVALAAIIVDRAFERLTRWISR HRHAQ >gi|289777623|gb|GG745508.1| GENE 359 398659 - 400347 2404 562 aa, chain + ## HITS:1 COG:STM2159 KEGG:ns NR:ns ## COG: STM2159 COG3275 # Protein_GI_number: 16765489 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Salmonella typhimurium LT2 # 1 561 1 561 561 947 88.0 0 MYEFDLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKLLCYVTFSIFCIMGTYF GLHIEDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSLGGMTALSCMVSTIVEGLL GGLVHSVLVKRGRPDKVFSPLTAGAITFVAELVQMMIILLIARPFQDALHLVQSIAAPMM VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEENSMKVAQVLI QELDIGAVAITDRDKLLAFTGIGDDHHLPGKPISSSYTQRAIETGEVVYADGNEVPYRCS IHPHCKLGSTLVIPLRGENQRVIGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY ERQKALLTQSEIKLLHAQVNPHFLFNALNTLKAVIRRDSDQAGQLVQYLSTFFRKNLKRP TEIVTLADEIEHVNAYLQIEKARFQANLQIQMAVPEGLAHHQLPAFTLQPIVENAIKHGT SQHLGVGEITIRASQDDRWLQLDIEDNAGLYRANPQASGLGMNLVDRRLRARFGADCGIS VTCEPERFTRVTLRLPLEENAC >gi|289777623|gb|GG745508.1| GENE 360 400341 - 401060 1114 239 aa, chain + ## HITS:1 COG:ECs2936 KEGG:ns NR:ns ## COG: ECs2936 COG3279 # Protein_GI_number: 15832190 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 404 86.0 1e-113 MLRVLIVDDEPLARENLRILLETQRDIEIVGECGNAVEAIGAVHKLRPDVLFLDIQMPRI SGLEMVGMLDPEHRPYIVFLTAFDEYAVKAFEEHAFDYLLKPIEAVRLEKTLARLRQERS LQDVSLLDDARQTLKYIPCTGHSRIWLLQMEDVAFVSSRMSGIYVTDREGKEGFTELTLR TLESRTPLLRCHRQYLVNMAHLKEIRLEENGQAELLMRAGQTVPVSRRYLKSLKEAIGL >gi|289777623|gb|GG745508.1| GENE 361 401108 - 401578 620 156 aa, chain + ## HITS:1 COG:yehS KEGG:ns NR:ns ## COG: yehS COG4807 # Protein_GI_number: 16130062 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 156 1 156 156 238 74.0 5e-63 MLSNDILRSLRYTLKANNNDMVRILALADMESTAASFDTWMTKEDEEGFVRCPDIILSGF LNGLIYDKRGKDDSAPELALERRVNNNTVLKKLRIAFSLKTDDIQAIMSEQKYRVSVPEI TAMMRAPEHKNYRECGDQFMRNFLRGLTHRVHHPKA >gi|289777623|gb|GG745508.1| GENE 362 401689 - 403722 2898 677 aa, chain - ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 567 1 567 567 1164 95.0 0 MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIM LKAQQLGITPEQMIGEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFI KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIDPKSVVSG ATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVY FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFISKRFDGVLAAELADPALYK TFTDAAESIGEAWDSREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICTM GLNMFRVLMTWLKPVLPQLAARAEAFLNSELSWDAIQQPLLAHKVNPFKALYNRIEMKQV EALVEASKEEVKATAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLR LTLDLGGEKRNVFSGIRSAYPDPQPLIGRLTVMVANLAPRKMRFGISEGMVMAAGPGGKD IFLLSPDDGAKPGQQVK >gi|289777623|gb|GG745508.1| GENE 363 403876 - 404985 1478 369 aa, chain + ## HITS:1 COG:STM2154 KEGG:ns NR:ns ## COG: STM2154 COG0489 # Protein_GI_number: 16765483 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 369 1 369 369 682 92.0 0 MNSQSQAKSPERLRAMVAGTLANFQHPTLKHNLTALKALHHVAWLDDTVHIELQMPFVWS SAFEVLKEQCSAELLRITGAKAIDWKLTHSIATLKRVKNQPGVNGVKNIIAISSGKGGVG KSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAEDSRPTSPDGTHMAPIIKYGLAT NSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPV TGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSMHICSNCGHHEPIFGTGGAQK LAEKYHTQLLGQLPLHITLREDLDNGTPTVVARPDSEFTDIYRQLAGRVAAQMYWQGEVI PGEIAFRAV >gi|289777623|gb|GG745508.1| GENE 364 404982 - 405443 289 153 aa, chain - ## HITS:1 COG:VCA0382 KEGG:ns NR:ns ## COG: VCA0382 COG0454 # Protein_GI_number: 15601145 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Vibrio cholerae # 25 148 13 135 141 107 38.0 1e-23 MARSSIIADPRNLHVRPGEPADSPALRQIFLRARSLSWTWLPAAAWRLEDFDAATADEQL WVAECDGQPVGFAAVWTADNFLHHLFVDPDWQGKHIGSALLAQVERSFTASGTLKCLMEN KNALRFYQRHGWTIEAQGASPEGRYWLMRSPRP >gi|289777623|gb|GG745508.1| GENE 365 405418 - 405735 497 105 aa, chain - ## HITS:1 COG:STM2148 KEGG:ns NR:ns ## COG: STM2148 COG5455 # Protein_GI_number: 16765477 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Salmonella typhimurium LT2 # 3 105 2 104 104 143 67.0 7e-35 MRKTKMMLLGVLLATAGASWTATAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIK QWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR >gi|289777623|gb|GG745508.1| GENE 366 405919 - 406818 1332 299 aa, chain + ## HITS:1 COG:PA3565 KEGG:ns NR:ns ## COG: PA3565 COG0583 # Protein_GI_number: 15598761 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 299 1 299 306 280 50.0 2e-75 MFRLEDLTLFVRAAALGSFSDAAREAGQQPAQVSAAIKRLETILNIRLFARSTRSLRLTP EGETWLPYATQMLDTLEAGLQKIQTPDDEVRGMLQIAVPSDLGRNLLLTLFRDFRQRHPA LRLRLLFSDQLTDVFKDPVDVAFRYGNNDDASFISLPVAPENRRVLVASPEWIARHGEPQ TLEELSQHNALIYILRGRPFDRWSLSLDGVVQQQKVSGTVMSDDAEVIRRLAVAGEGIAY KSMLDVSDDLRAGRLRRLLPRYQGDVVPLNLICPHRKQLSAAVRLLYEEVKSHCEGLNA >gi|289777623|gb|GG745508.1| GENE 367 406808 - 408151 2077 447 aa, chain - ## HITS:1 COG:FN1877 KEGG:ns NR:ns ## COG: FN1877 COG2252 # Protein_GI_number: 19705182 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 15 427 13 424 442 289 38.0 6e-78 MADNTLHSSDRANWLERRFALRSRGGTLRTECLAGITGFLAAAYLLVVIPGLLAIGGMDK GAATTGTILVFVVGSLLMAFYANLPFIVGPGIGGSVLVGVTLAGSEGIGWQTGLGIACWS GILFFLLTRFGLREVVTRSVPQSIKLGLTASIGLFVAVLGFRNAGLVLANAKTNALMLGD FLAPGALVALCGLFLAIALQARKIPGAILWAILCATLVGIPFGVTHLPTSFIDVPHSLTP VLGQVDLLGALNIAFLPFLFVFFASEFFSTMGTTLAVGGEAGLLDEEGNMPQINRPFMVD SIAAALGPWVGIPAATALIESSAAAEAGGKTGLTALSAAVMFLLMLLFTPVALMIPKEAT APALILIGLNMFSGLRKVDLGNFTDGLPVLMMVMITLIANSFGTGIAGGLLFYIVIKAIA GKWREIPIGLWVLVVPLVYYFATLVRH >gi|289777623|gb|GG745508.1| GENE 368 408154 - 409965 1953 603 aa, chain - ## HITS:1 COG:AGl883 KEGG:ns NR:ns ## COG: AGl883 COG1001 # Protein_GI_number: 15890557 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 574 28 581 597 545 52.0 1e-155 MSSNAQVRRRAVQAARGESPFDLLLVEAQIVDMATGEIRPADVGIVGEMIASVHPRGSRA DAHEVRSLAGGYLSPGLMDTHVHLESSHLPPERYAEIVLTQGTTAVFWDPHELANVLGVE GVRYAVDASRHLPLQVMVAAPSSVPSTPGLEMSGADFAGAEMETMLGWPEVRGVAEVMDM HGVLHGSERMQEIVQAGLNSGKLIEGHARGLSGADLQAYLAAGVTSDHELTSADDALEKL RAGLTIEIRGSHPYLLPDIVAALKTLPHLSSQITVCTDDVPPDMLLEKGGIIALLNLLIE HGLPAVDALRFATLNAAIRLQRHDLGLIAAGRRADLVVFDSLEKLVAREVYVGGERLAHA GRLLKPIAPAPGVTPPRDTLSIAPLRADDFVLRVQGIRHGVARLRHIRGARFTQWGEVEV QVRDGKVQLPAGFSLIWVKHRHGRHQATPQIALLEGWGELRGAIATSYSHDSHNLVVLGR DADDMALAANQLIASGGGMALAQQGEILAHVAMPIAGMLSDLPAAELARQFRELRDLSSQ VADWEPPYRVFKAIEGTCLACNAGPHLTDLGLTDGGSRQIVDPLIACRETPEPTDHNNNP QGA >gi|289777623|gb|GG745508.1| GENE 369 410089 - 411012 1136 307 aa, chain + ## HITS:1 COG:AGl1195 KEGG:ns NR:ns ## COG: AGl1195 COG0583 # Protein_GI_number: 15890718 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 298 10 291 298 135 30.0 7e-32 MNEPWQRLPALSLKQLQYFVTLAQLRHFTDTASRLAISQPALSSALRQIETVLGGKLVNR TASAVTLTELGAAILPHAQRILSVAQAAFFDMQQIVEAGGDGTVRIGLVPSVSSLLFPLL PQTLAQAFPRLRIEFHDQTNDALIQALLRGEIDFGIGAIDSSVPAELLVYPLREDPFVAV LHRDDPLAAQAHLPWKQLVGRDIAVFSKGNIQRLVAALVESHRLTLTTRYQVDYIETLYG LVRSRLAVAILPALYTTHLQDPALQVAQLQQPALTRTVALMRGPQALPPLIEACFSLLQG ELRRADA >gi|289777623|gb|GG745508.1| GENE 370 411095 - 413071 2554 658 aa, chain - ## HITS:1 COG:YOL164w KEGG:ns NR:ns ## COG: YOL164w COG2015 # Protein_GI_number: 6324409 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Saccharomyces cerevisiae # 30 658 17 641 646 647 50.0 0 MKLNQIAKNLALAGMLSSLSITAFAAAPQQDATPATREANQALYNKLPFADKTDFNNAHQ GFIAPLPPAMLKGAQGNIIWDPAKYDFVKEGEKAPDTVNPSLWRQSQLLNIGGLFKVTDG VYQIRNLDLSNMTIIEGKTGITVIDPLLSAEPAKEALALYFAHRPKKPVVAVLFTHSHVD HYGGIRGVIDEADVKAGKVKIYAPAGFMEEAVSENIMAGTAMSRRASYMYGNLLKPDAKG QVGAGLGTTTSAGTVTLIPPTHYITHTGQQEVIDGLTYDFMMAPGSEAPSEMLWYVKEKK MIEAAEDVTHTLHNTYSLRGAKIRDPLAWSKYINAAIDRWGNEAEVIIAQHHWPTWGNDN IVKLMKGQRDMYRYINDQTLRMANLGMTRDEIAANFKLPDSLEKQWSSRGYYGSVSHDVK ATYVFYLGWFDGNPATLDELPPEQAAKKFVEYMGGADAIMQKAKADYQQGNYRWVAQVTS KIVFADPDNQQARDLEADALEQLGYQAEAGTWRNFYLTGAQELRNGVQKLPTPNTASPDT VRAMTPEMFFDYLGVHINGEKAGAAKAVFNIDLGKDGGKYKLELENGVLNHTANAVADNA DASISLSRDTLNKIILKQETLKQAEAQGKVKISGNGAKLDEMLSYMDTFAFWFNIVTP >gi|289777623|gb|GG745508.1| GENE 371 413275 - 413910 407 211 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1514 NR:ns ## KEGG: Kvar_1514 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 211 1 211 211 429 100.0 1e-119 MNFQEIHSYYKTLAIADFFADIVTEGEEIILAANKKWRPESGYIYFCTEGSLSILMPDDG LSIGNSIEYMPIGLMERYCPLAKFEYTGSGPVTLRKITYAAFDRLFIENHPQRVEALAKV LVFMSIFTIDLHNERRQVTSYQTIRPMLYRYLYRQHTHEGENEGLALFIIRRTNLSRTHV FRVLADLKAGGYITMKRGKLISIDRPLPADY >gi|289777623|gb|GG745508.1| GENE 372 413978 - 415954 2971 658 aa, chain - ## HITS:1 COG:YOL164w KEGG:ns NR:ns ## COG: YOL164w COG2015 # Protein_GI_number: 6324409 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Saccharomyces cerevisiae # 23 658 10 641 646 657 50.0 0 MKLTPIVKGLALAGLLNSLAFAASADTSAKEATEATKKANDALYNQLPFSDNTDFTNAHK GFIAALPPEVIKGEQGNVIWDPGQYAFIKEGEKAPETVNPSLWRQSQLINISGLFEVTDG IYQIRNLDLSNMTIIEGKEGITVVDPLVSAETAKVGMDLYYKNRGKKPVVAVIYTHSHVD HYGGVRGVVDEADVKSGKVKIYAPAGFMEAAVAENIMAGNVMSRRASYMYGNLLKPDAKG QVGAGLGTTTSAGTVTLIAPTNIIDKDGQKEVIDGLTYDFMLAPGSEAPSEMLWYIEEKK LIESAEDVTHTLHNTYSLRGAKIREPLPWSKYINQAIVRWGDKAEIIMAQHHWPTWGNEN VVNLLKSQRDLYRYINDQTLRMANEGLTRDEIAANFKLPDSLANTWANRGYYGSVSHDVK ATYVLYLGWFDGNPATLDELPPEEAAKKFVDYMGGADAILKKAKEDYDQGNYRWVAQVVS KIVFADPNNQQARNLEADALEQLGYQAESGPWRNFYLTGAQELRNGVVKGPTPNTASPDT VRAMTPEMFFDYLAVHINGEKAGNAKSVFNIDLGNDGGKYKLELENGVLNHTANAEAKEA DATLTLDRATLNKIILKEETLKQAEEKGEVKISGNGAKLDEMLGYMDKFDFWFNIVTP >gi|289777623|gb|GG745508.1| GENE 373 416317 - 416607 382 96 aa, chain + ## HITS:1 COG:thiM KEGG:ns NR:ns ## COG: thiM COG2145 # Protein_GI_number: 16130042 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli K12 # 3 91 4 92 262 115 73.0 2e-26 MPELLNPAPVAHLRHLLRAHSPLVHCMTNDVVQTFTANVLLAVGASPAMVIDPREAAQFA AIADALLINVGTLTEDRAVAMRAAVEHARQAGRLAS >gi|289777623|gb|GG745508.1| GENE 374 417042 - 417242 305 66 aa, chain + ## HITS:1 COG:thiM KEGG:ns NR:ns ## COG: thiM COG2145 # Protein_GI_number: 16130042 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli K12 # 1 65 193 258 262 85 75.0 2e-17 MTRVVGTGCALSAVVAASAALPGDRLENVAAACGLMKQAGEIAARQGGPGSFIPAFLDAL YQEVQG >gi|289777623|gb|GG745508.1| GENE 375 417239 - 418039 1210 266 aa, chain + ## HITS:1 COG:thiD KEGG:ns NR:ns ## COG: thiD COG0351 # Protein_GI_number: 16130041 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Escherichia coli K12 # 1 266 1 266 266 475 91.0 1e-134 MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFV AAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLARYRVANVVLDTVMLAKSGDPLLSAS AVETLRQRLLPQVSLITPNLPEAAALLDAPHARTEREMLEQGRALLALGCGAVLMKGGHL DDAESPDWLFTREGEQRFTTPRVQTKNTHGTGCTLSAALAALRPRHADWAATVAEAKAWL SAALAQADSLEVGHGIGPVHHFHAWW >gi|289777623|gb|GG745508.1| GENE 376 418187 - 419239 1374 350 aa, chain + ## HITS:1 COG:STM2141 KEGG:ns NR:ns ## COG: STM2141 COG1830 # Protein_GI_number: 16765470 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 350 1 350 350 672 96.0 0 MTDITQLLGKDAESLLQHRCITIPADQLYLPGADYVDRVMVDNNRPPAVLRNMQTLYNTG RLGGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS RRYAHRIPFLVKLNHNETLSYPTEYDQTLYASVEQAFNMGAVAVGATIYFGSEQSRRQIE EISAAFERAHELGLVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAVNFGYTDDRVYSKLTSDNPIDLVRYQLANCYMGRAGLINSGGAAGGETDLA DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDGKVTIA >gi|289777623|gb|GG745508.1| GENE 377 419321 - 420262 1149 313 aa, chain - ## HITS:1 COG:YPO2324 KEGG:ns NR:ns ## COG: YPO2324 COG2390 # Protein_GI_number: 16122548 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Yersinia pestis # 4 311 3 313 318 269 44.0 6e-72 MSKEDDIRLDQKVRAAWMYYIAGQNQSEIASQLGTSRPVVQRLIAAAKEEGIVSINLHHP VANCLDYAQLLQEKYRLIECNVVPAFSEESTLDSVSFGCYQLMARYLQDDKEKIIGLGSG LTLKKALQRIDFDSLNTRCVALISAMNADGQCNYYDDVPLLLTRKIKAKYYQWPAPRYAQ SAEEHEMWCTNRLFRSVSGVAQEADVIFVGIGPLGTQSPIFKDGFINQAQMDELTARGGI GEILGRFIDAEGHVVDSEINRMITSYDIRQNHCPRIAAACGEYKRPAILAALKGGWINGL VTDEHTARWLLTR >gi|289777623|gb|GG745508.1| GENE 378 420469 - 421836 1997 455 aa, chain + ## HITS:1 COG:YPO2325 KEGG:ns NR:ns ## COG: YPO2325 COG0246 # Protein_GI_number: 16122549 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Yersinia pestis # 7 450 12 455 463 628 65.0 1e-180 MNNQFTWLHIGLGSFHRAHQAWYLHRLIASGDKRWHIAAGNIRNDAEQVVQALAAQGGRY VLETVSPEGERDYEEITSIQKLLPWQAGLQPLINEGANPQTKVIAFTVTEGGYYLNTRHQ LETSNPDLQADLQGECKTIYGTLARILEKRMADDAGPLTLLNCDNVRHNGERFHDGMVEF LQLTGKQAVIDWMAANTTCPNTMVDRITPRPAADLPARIKAQTGIDDKAPVMGETFIQWV VENHFRDARPNLEAVGVEMVESVIPYEEAKIRILNASHSCIAWAGTLIGQQYIHESTLTD AIYAIADRYVTEDVIPCLGDNGIDLPTYRDVVLKRFTNPYIQDTNQRVAADGFSKIPAMI APTLQECYQRGVRPEATAMLPALFFVFMEQWHKGTLPYQYQDGILDAQAVHEMYEAQDPV AVYARDKALFGDLANNADFLALMREKVAAVYTLIK >gi|289777623|gb|GG745508.1| GENE 379 421847 - 423310 1959 487 aa, chain + ## HITS:1 COG:RSc2128 KEGG:ns NR:ns ## COG: RSc2128 COG1070 # Protein_GI_number: 17546847 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Ralstonia solanacearum # 1 478 1 476 491 554 59.0 1e-157 MYLGIDLGTSEVKALVIDENYEVIASHSAPLSIQRPHPHWSEQSPELWWEATEYLMSTLR EKCAQHWPAIKAIGLSGQMHGAVLLDEKGETIRPAILWNDTRCAAECAELEAMAPELHQV AGNLAMPGFTAPKLLWVRRHEPQHFQRTATVLLPKDYLRYRMTGKKVSDMSDAAGTLWLD VAKRDWSDALLDKCGLSRSQMPTLVEGCEVSATLDPQVAERWGLNASVVVAGGGGDNAVS AIGVGAVSPGDAFISLGTSGVLFVVTDAYRPAPQSAVHAFCHVLPNLWHQMSVMLSAASC LQWFCRLTGTTEVALLAEIAELSEEEKAHAPFFLPYLSGERTPHNDPDARGMFWGMTHAS LRAQLGYAVLEGVSFGINDGLQALKESGTPIAQCSLVGGGARSPFWAQLLADILAMPVVT HKGGETGGALGAARLACLAVGKPIAAVCEKPEVWQTWRTDPVRHHTLMQRYAQFKDLYLN DLNYRQH >gi|289777623|gb|GG745508.1| GENE 380 423381 - 424658 1771 425 aa, chain + ## HITS:1 COG:BS_csbX KEGG:ns NR:ns ## COG: BS_csbX COG0477 # Protein_GI_number: 16079828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 9 408 14 409 435 274 36.0 2e-73 MSINNKQWLGLPLNLLWGYIAIAVFMTGDGFELAFLSHYIKALGFSPAEASFAFTLYGLA AALSAWISGVVAEIITPLKTMMIGFVLWCVFHVLFLVFGLGHANYALILIFYGIRGFAYP LFLYSFIVAIVHNVKSDNASSAIGWFWAVYSIGIGVFGSYIPSFTIPHIGELGTLWLALA FCVTGGVIALASLRHIQTPQHMQNLTTRQKFSELGRAATLLYTNRNILLSSMVRIINTLS LFGFAVIMPMMFVDELGFTTSEWLQVWAVFFFTTIFSNVLWGILGEKLGWMKVVRWFGCI GMALSSLAFYYIPQHFGHSFAMALIPAIALGIFVAAFVPLAAVFPALEPKHKGAAISVYN LSAGMSNFLAPAIAVVLLPFFSTIGVVIAYTALYVVAFFLCAFIRVEQPGFSHKEATARE QVEFS >gi|289777623|gb|GG745508.1| GENE 381 424707 - 425369 733 220 aa, chain + ## HITS:1 COG:STM1322 KEGG:ns NR:ns ## COG: STM1322 COG0637 # Protein_GI_number: 16764673 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 5 211 9 218 222 105 33.0 8e-23 MSMQAVIFDMDGVIIDSEALWRQAQIDALAQWGATASVDECETLTKGKRLDEIAGTWCRY FQLDLDPQRLEAAILQRITGLIATEGEPMHGVHEALRYFREAGYQIALATSSSRQVIAAV LNKLSLWHFFDVVSSADDEPRGKPHPAVYLTTLRKLNLNASQCLVIEDSYNGFCAAQAAG IPTAVVAEDSRQGRYQAAVGRYQTLPELLEALNAEPTAVA >gi|289777623|gb|GG745508.1| GENE 382 425667 - 426821 1484 384 aa, chain + ## HITS:1 COG:AGl2751 KEGG:ns NR:ns ## COG: AGl2751 COG4948 # Protein_GI_number: 15891485 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 381 26 406 407 545 66.0 1e-155 MKIESVNVTVFQYPTRRVSDSAGHSHPGAESMAKMAMLTITADDGAQGFSFAPPEVVRPF VVNTFFRKVLVGQDPFNRERIWQDLNHWQRGSAHQLTERALSFVEQALWDLIGRSLRMPV YKLLGGYRDTVPAYGSTMCGDDLPGGLSTPEEYAAFAEKLVARGYKAIKLHTWMPPISFA PNPKMDIKACAAVREAVGPDIDLMIDGYHWYSRAEALWIGKALEKLNFAWFEEPMEEDSM SSYAWLAENLSIPIVGPESFGGKHHMRAEWVKAGACDILRAGANGVGGITPTMKVAALAE SFGMDCEVHGNGAASLAVVGAIRNCRWYERGLLHPFLDYDEPAAYLNSIVDPMDDQGFVH LSQRPGLGEDINFAYIEANTVSHD >gi|289777623|gb|GG745508.1| GENE 383 426992 - 428563 1987 523 aa, chain + ## HITS:1 COG:AGl2748 KEGG:ns NR:ns ## COG: AGl2748 COG0747 # Protein_GI_number: 15891483 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 510 38 542 549 502 49.0 1e-142 MGSGAAVAKTPPDQLIIGMNMNNLLTLDPAAMTGNEVVGIVVNLYDSLVELDPEQLTTVK PALAKSWDISPDGKTLTFHLRDDVKFHSGNPLTAADVVWSMRRILHLNLAQASVWKSYGF SKKNIDSQVSAPDRFTVQIVLPKDNDPQLVIYSLAALGNLGVLDSKTVQSHQQDNDWGNR WLTTHEAGSGPFTLETWQAKEVLRMKRNPDYWRGEAKMSRVVLRHFQESQTLRLMIEKGD LDIANNMAVSDINALRSDPLLTVDAVQRGTMYYVAMSMKEAHFANPKVREAVRYLIDYQG INKALMPGYGVLHQRPIKAGMPSTLPDPGYRLDVARAKKLLAEAGYPNGFDTTLRVLSDQ PFLNIAIAVQSTLMQAGINAKIITGTGNQIYGAMRERKFDLLVGRGGSGMEPHPHSSLRA LVYNPDNSDKARLTNFQGWRTGFYDPQLNTMIDQALLERDPQKQVADYQAIQTRYDQLVP ALIPLSQMVDSVVVRNEVREYLPHPSATTFLRDVYKVREGEKG >gi|289777623|gb|GG745508.1| GENE 384 428560 - 429597 349 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 75 344 43 313 320 139 31 6e-31 MSTAILAPGSRGRRLSKRLLQVVITLFGLLLLTFTIGRVMPIDPVLAIVGPDADQSTYQQ VYQQLGFDKSLTTQFGIYFVNLLHGDLGNALLTGKPVVDDIIRVFPATMELATMAIIVGA GLGIPLGVLAAARRNSVSDYVVRIISLAGYSTPIFWVGMMGLLVFYAWLGWVGGAGRVDL GLDGVVPRRTGLMTVDALLAGNGQVFWNAINHLILPASLLGFHSLAYISRMTRSFMLAQL SQEFIITARVKGLTERQVIWNHAFRNILVQLLTVVALAYGALLEGAVLIETVFSWPGFGS YLTGSLLLGDMNAVMGCVLLVGVIFVMLNLLSDMLYQFFDPRTKS >gi|289777623|gb|GG745508.1| GENE 385 429594 - 430499 1097 301 aa, chain + ## HITS:1 COG:AGc4571 KEGG:ns NR:ns ## COG: AGc4571 COG1173 # Protein_GI_number: 15889781 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 299 33 298 300 330 62.0 3e-90 MTVSLDSPLSGGAGEGRQRLQRAAARAIGFIGKMARNPLTAIGGGIIFLLLVVAIFAPLI APYNPLVQDLNSALVAPNAQHWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLL LGVSAGYFGGKVDMVLMRVTDIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIAR LARAETLSLRQADFISAVRLQGASSARVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLG FLGLGAQPPEPEWGAMISSGRTYMMECWWVVTIPGLAILINSLAFNFLGDGLRDILDPRS E >gi|289777623|gb|GG745508.1| GENE 386 430462 - 431334 442 290 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 35 274 37 271 329 174 42 9e-42 MAYVTSSIPVVNNAPLLDVRDLCVDFVNGSAVTHAVRGVSFQLGHEKLAIVGESGSGKST VGRALLQLHPKKARVSASRMQFADLDLQHLSEAQMRGVRGKRISMIMQDPKYSLNPVVCV GKQIAEAWLTHHPGRKDEAKARALEMLKVVRIRQPERVYQLYPHEISGGQGQRIMIAMML ITDPELIIADEPTSALDVSVRLQVLGLLDDLVQSRGLGLIFISHDINLVRSFCDRVLVMY AGRVVESIAAKDLDNARHPYTQGLINSLPDMQHRRPILPVLQRQASWLTD >gi|289777623|gb|GG745508.1| GENE 387 431345 - 432118 374 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 219 278 500 563 148 38 5e-76 MIEVQHLNLAFGEGEKRNQVLYDVSFHVKPGEIYGLVGESGSGKTTVLKCLAGLFTHWQG ELTIDAQPLGHEISRERCRQVQMVFQDPYGSLHPRHTIGDILEEPLQIHRINDRDRRINV LLDKVGLNRAFRERYPHQLSGGQRQRVAIARALILEPQVLLLDEPTSALDVSVQAEILNL LAELQREAKLTYLMVTHDLGVIAHLCQKVAVMQYGKILETLTVDALVSGQAQTAYTQMLV NASRQYTREMAREVADY >gi|289777623|gb|GG745508.1| GENE 388 432358 - 433254 1145 298 aa, chain - ## HITS:1 COG:STM2140 KEGG:ns NR:ns ## COG: STM2140 COG1597 # Protein_GI_number: 16765469 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Salmonella typhimurium LT2 # 2 298 1 299 299 476 79.0 1e-134 MMSTFPASLLILNGKGANEPQLREAVNLLRDEGIDIHVRVTWEKGDAVRFIDEALQLNVE TVIAGGGDGTINEVATALVERGSKMALGILPLGTANDFATSVGIPQDLASALKLAIVGRD VPIDIARVNDKTGFINMATGGFGTRITTETPEKLKAALGGVSYLIHGLMRMDTLKPDRCE IRGENFHWQGDALVIGIGNGRQAGGGQQLCPEALINDGLLHLRIFTGEELIPALFSTLAN PENSPNIVDGVSSWFEITAPHEMTFNLDGEPLSGKTFRMELLPAALRCRLPPDCPLLR >gi|289777623|gb|GG745508.1| GENE 389 433497 - 434858 2019 453 aa, chain - ## HITS:1 COG:ECs2889 KEGG:ns NR:ns ## COG: ECs2889 COG0826 # Protein_GI_number: 15832143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 452 1 452 453 895 96.0 0 MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGK KFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQAN AVNWATVKFWQQMGLTRVILSRELSLDEIEEIRRQVPEMEIEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYNVAEGKEDDVGNIVHKYEPIPVQTVEPTLGIGAPTDKVF MIEEAKRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTQMGVHSLKIEGRTKSFYYCAR TAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSLSERQ QFVGEFTGERNGPLAAVAVKNKFSVGDSLELMTPQGNVNFTLEHMENGKGEAMPVAPGDG YTVWLPVPDDLPLQYALLMRNFTGQTTRNPHGN >gi|289777623|gb|GG745508.1| GENE 390 435177 - 435899 1003 240 aa, chain - ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 1 239 240 437 92.0 1e-123 MTELPVDENTPRILIVEDEPKLGQLLIDYLQAAGYAPTLINHGDKVLPYVRQTPPHLILL DLMLPGTDGLTLCREIRRFSDVPVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVAR VKTILRRCKPQRDLQALDAQSPLIVDEGRFQASWRDKLLDLTPAEFRLLKTLSQEPGKVF SREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLEALDAEQSFIRAVYGVGYRWEADACRLA >gi|289777623|gb|GG745508.1| GENE 391 435896 - 437398 1729 500 aa, chain - ## HITS:1 COG:ECs2886 KEGG:ns NR:ns ## COG: ECs2886 COG0642 # Protein_GI_number: 15832140 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 500 1 467 467 721 76.0 0 MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKRGNEQRLTMLSDALSE QYAQHGSWAFLRNNDRFIFQLLRTFERDNDDRSPPGHGMKPGPMEGQGPDGPPPDGPPDG SSDTPPPRPEMPPHGWRTMFWVVDQSGRVLVGPRERVPEDGTQRSIVVNGVEVGKVIASP VERLTRNTDINFDRQQKRTSWLIVALATLLAALATFPLARGLLAPVKRLVEGTHKLAAGD FSTRVTVTGGDELGRLAQDFNQLASTLERNQQMRRDLMADISHELRTPLAVLRGELEAIQ DGVRRFTPESIPSLQAEVATLTKLVDDLHQLSMSDEGALAYQKTSLDIITLLEVAAGAFR ERFASRQLSIQVSLPEQAMIFGDRDRLMQLFNNLLENSLRYTDSGGSLHITARRSGRMLV IDFADSAPGVSDEQLARLCERFYRAEGSRNRASGGSGLGLAICLNIVAAHGGTLRADHSP FGGVSIKVELPLEHDLPRDV >gi|289777623|gb|GG745508.1| GENE 392 437395 - 438810 2103 471 aa, chain - ## HITS:1 COG:ECs2885 KEGG:ns NR:ns ## COG: ECs2885 COG0477 # Protein_GI_number: 15832139 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 470 1 470 471 654 83.0 0 MTDLPASVRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMIIVSYVLTVAV MLPASGWLADRVGVRNIFFTAIVLFTAGSLFCAQASTLDQLVMARVLQGVGGAMMVPVGR LTVMKIVPRDQYMAAMTFVTLPGQVGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAIA TLCLMPNYTLQTRRFDLSGFLLLAAGMATLTLALDGQRGLGISSHWLAGLVAVGLAALLL YLWHARGNARALFSLNLFRNRTFSLGLGGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVASTLGLAAISLLFMFSALAGWYYALPLVL FLQGMINSSRFSSMNTLTLKDLPDDLASSGNSLLSMVMQLSMSIGVTIAGLLLGLYGQQH MSLDAASTHQVFLYTYLSMAAIIALPALIFSRVPDDVGTNTVIRRRNRSGS >gi|289777623|gb|GG745508.1| GENE 393 438812 - 441889 4319 1025 aa, chain - ## HITS:1 COG:ECs2884 KEGG:ns NR:ns ## COG: ECs2884 COG0841 # Protein_GI_number: 15832138 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1025 1 1025 1025 1733 91.0 0 MKFFALFIYRPVATILISLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAQTIAQIDGVGDVDVGGS SLPAVRVDLNPQALFNQGVSLDAVRTAISDANVRKPQGALEDSAHRWQVQTNDELKTAAD YQPLIVHYQNGAAVRLGDVATVSDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI RARLPELQQTIPAAIDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATL IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKP LQAALQGSREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLAVSLT LTPMMCGWLLKSGKPHQPTRNRGFGRLLVAVQGGYGKSLKWVLRHSRLTGLVVLGTIALS VWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIREDPAVDNVTGFTG GSRVNSGMMFITLKSRDQRHETAQQVIDRLRKKLANEPGANLFLMAVQDIRVGGRQSNAS YQYTLLSDDLSALREWEPKIRKALAALPELADVNSDQQDNGAEMDLVYDRDTMSRLGISV QDANNLLNNAFGQRQISTIYQPLNQYKVVMEVDPAYTQDVSALDKMFVINSEGKPIPLAY FAKWQPANAPLSVNHQGLSAASTISFNLPTGRSLSEASDAINRTMTQLGVPSSVRGSFAG TAQVFQQTMNAQVILILAAIATVYIVLGMLYESYVHPLTILSTLPSAGVGALLALEIFDA PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRTGNLAPEEAIFQACLLRFRPIMMTTLA ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRHSS QPVSE >gi|289777623|gb|GG745508.1| GENE 394 441890 - 445012 4661 1040 aa, chain - ## HITS:1 COG:yegN KEGG:ns NR:ns ## COG: yegN COG0841 # Protein_GI_number: 16130015 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1040 1 1040 1040 1663 90.0 0 MQVLPPGRTGGPSRLFIMRPVATTLLMVAILLAGIIGYRFLPVSALPEVDYPTIQVVTLY PGASPDVVTSAITAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLPLDVAEQEVQAA INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSSAIPMTQVEDMVETRVAQKISQVSG VGLVTLAGGQRPAVRVKLNAQAIAALGLTSETVRTAITSANVNSAKGSLDGPARAVTLSA NDQMQSAEDYRRLIIAYQNGAPIRLGDVASVEQGAENSWLGAWANQQRAIVMNVQRQPGA NIIDTADSIRQMLPQLTESLPKSVKVQVLSDRTTNIRASVRDTQFELMLAIALVVMIIYL FLRNVPATIIPGVAVPLSLVGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAI LISAVVSLTLTPMMCARMLSHESLRKQNRFSRASERFFERVIAVYGRWLSRVLNHPWLTL GVALSTLALSIILWVFIPKGFFPIQDNGIIQGTLQAPQSVSFASMAERQRQVASIILKDP AVESLTSFVGVDGTNPALNSARLQINLKPLDERDDRVQTVISRLQQAVDGVPGVALYLQP TQDLTIDTTVSRTQYQFTLQANSLEALSTWVPPLLSRLQAQPQLANVSSDWQDKGLAAYI KVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEQDTEATPGLAALDNI RLTSSDGGIVPLTAIATVEQRFTPLSVNHLDQFPVTTISFNVPDNYSLGEAVDAILAAEQ SLDFPTDIRTQFQGSSLAFQSALGSTVWLVVAAVVAMYIVLGVLYESFIHPITILSTLPT AGVGALLALWLAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMPPREAIYQA CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLMLSQVLTLFTTPVIYL LFDRLSLHLKRRFPRQEEEA >gi|289777623|gb|GG745508.1| GENE 395 445012 - 446070 1341 352 aa, chain - ## HITS:1 COG:ECs2882 KEGG:ns NR:ns ## COG: ECs2882 COG0845 # Protein_GI_number: 15832136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 352 111 464 464 534 83.0 1e-152 MQAATATEQAVPRYLTGLGTVTAANTVTVRSRVDGQLLSLHFQEGQQVKAGDLLAQIDPS QFKVALAQAQGQLAKDNATLANARRDLARYQQLVKTNLVSRQELDTQQSLVVESAGTVKA DEAAVASAQLQLDWTRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDVVFTLP ENSIATVVQAQKAGKALSVEAWDRTNKQKISVGELLSLDNQIDATTGTIKLKARFSNLDD ALFPNQFVNARLLVDTEENAVVIPAAALQMGNEGHFVWVLNDENKVSKHSVTPGIQDSQK VVISAGLSAGDRVVTDGIDRLTEGAKVEVVTASGSEQAQPAPRQSGKHGARS >gi|289777623|gb|GG745508.1| GENE 396 446302 - 446475 158 57 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1537 NR:ns ## KEGG: Kvar_1537 # Name: not_defined # Def: efflux transporter RND family, MFP subunit # Organism: K.variicola # Pathway: Two-component system [PATH:kva02020] # 1 57 1 57 412 85 98.0 9e-16 MKGSNIRRWGAALAVVIIAGAAYWFWHDRGTSGSSAPAAGQGPQGPGGARHGRFGGS >gi|289777623|gb|GG745508.1| GENE 397 446818 - 448050 1899 410 aa, chain + ## HITS:1 COG:CC0263 KEGG:ns NR:ns ## COG: CC0263 COG1301 # Protein_GI_number: 16124518 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Caulobacter vibrioides # 1 408 13 417 417 357 52.0 2e-98 MLMGILSGAAIHAYATPTTISAWADNITLLTDLFLRLIKMVIAPLVFSTLTVGIMRLGET ATIGRVGGKAMVWFITSSVLSILVGLVIVTFQHPGAGLNLAVPKEAVDTGLAVSGMSLKG FLSHTIPTSITEAMANNEILQIVVFSMFFGIAGASLGEKFNAPLVAALNVVSHIMLKVTG YVMYVAPLAIFAAISSVIASQGLGILLNYASFIGGYYLAVLLTSAVLIAVGYMVLKKEVF RLLNMLKDPVLVAFTTSSSEAAYPKTLERLVKFGCSRNIVSFVLPIGYSFNLVGSMVYCS FAAMFIAQAYNVPLSFSEITVMMLTLMLASKGIAGVPRSALVVLAATIPSFNIPVAGILL LMGIDHFLDMGRSAINVLGNGIATAMLSKNEGLLTDEEAQPDWEAEKAEA >gi|289777623|gb|GG745508.1| GENE 398 448325 - 448936 653 203 aa, chain - ## HITS:1 COG:no KEGG:KPK_1641 NR:ns ## KEGG: KPK_1641 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 203 1 203 203 400 100.0 1e-110 MRNINVTINTRNTFVRESLVAMVNDLSRDDMRARFSWRNNDLSDEDIIICEVIPGEIYLC NTLIKNRKKGSSLIILHSYDQLPEDDFMINCLKGVIFVSLKTASIPQLLAIIKSELQHCM DPSATDATSRELSCASCPHRVLSRSQTAVVHGILEGLDMSKIAALQRVSPRTAAYHKNKI MEKYSLNNNHDFFQFMNLLRERW >gi|289777623|gb|GG745508.1| GENE 399 449430 - 450131 860 233 aa, chain - ## HITS:1 COG:PA1179 KEGG:ns NR:ns ## COG: PA1179 COG0745 # Protein_GI_number: 15596376 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 3 231 1 220 225 99 31.0 4e-21 MALRLAIIEDNADLLDELLAWLGYRGFEVWGSRSAEAFWRQLHSHPVDIVLIDIGLPGED GLSVLSYLHELGHYGLVVVSARGQQQDKLQALSLGADAYLIKPVNFAHLAETLTALGARL QQDRPAALPSEAPGTASSAATGLWRLHEDKLISPDARTLELTQQEYRLVELLMRNRNEVC SKLDLHACLFSHDSEPDLHRIDVVISRLRHKARQQGIHLPVRAIFGKGLAFIS >gi|289777623|gb|GG745508.1| GENE 400 450146 - 452002 2184 618 aa, chain - ## HITS:1 COG:RSc3385 KEGG:ns NR:ns ## COG: RSc3385 COG2205 # Protein_GI_number: 17548102 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Ralstonia solanacearum # 363 615 676 924 937 108 29.0 4e-23 MLLVAPQAQAVTRQVGIDIPVQWYADASGQMTIDRFAALPTDQLATTRQIPSFGYSRKTW WLRSELPGTWFVGEPRWLQLGPSFVDHLTIYYRPLGSDAPWEQRTFGDRDVARESDLHYR ESVLIIPPPPTAAGYEVVFRLHSTSTLILLVSLSSPQEFVQRATADTAFWSFYFGLAAVA SGVALWLALALRRRLLWGICLFSLNYPLVAALHGFPEWFFGHAALPFQDFMISSLSLFSY ATALWLHSEIFDLKKNMPRLHQLLIAAVVLNLVLQVSIPLGFYGFAMQIEGVIFIIITPV LLFTSWWLWRKKAIDRNTLLLGLLPPFYVAAAVLVQLSIHGIIPFHMAIYSLWQYALIVH IITVLIIAILRVRAENRQLEQKQRLARELQIEREASFHQRQFMGMVAHEFRTPLAVIQAA LENLRLSAASASQEARFDRIGRAATRLVQLTDNCLADARLASHDLHVDRQQTALLSVINM AASVVAISHDHYLNIRHHGAVESPQLQADAGLLCIAIANLLDNAVKYSPPGEIAIDIRSE AGHTELRIRDHGPGLPDGQAELIFERYRRGEHTSPVPGGTGLGLYVARQIVQAHDGKLWL AEHGPDGCTFILTLPTVA >gi|289777623|gb|GG745508.1| GENE 401 452292 - 453644 1635 450 aa, chain - ## HITS:1 COG:STM2125 KEGG:ns NR:ns ## COG: STM2125 COG0443 # Protein_GI_number: 16765455 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Salmonella typhimurium LT2 # 1 450 1 450 450 769 84.0 0 MFIGFDYGTANCSVAVMRENTPQLLTLENGSALLPSMLCAPTREAVSEWLYRHHDVPTHS DENQALLRRAIAANRDEDIEVLRNSVQFGLASLHQYVEEPEEVYFVKSPKSFLGASGLKP QQVALFEDLVCAMMLHIKLQAESQLPEQIDQAVIGRPINFQGLGGDDANAQAQGILERAA LRAGFRDVVFQFEPVAAGLDFEATLNEEKRVLVVDIGGGTTDCSLLLMGPQWRERADRQQ SLLGHSGCRIGGNDLDIALAFKCLMPLLGMGGETEKGTALPILPWWNAVAINDVPAQSDF YSTANGRLLNDLLRSARDADKVALLLKVWRQRLSYRLVRSAEESKIALSSAASVETALPF IQDELATAIAQQGLEAALDQPLTRIMEQVQLALDSSQTTPDVIYLTGGSARSPLIKKALT AQLPGIPLAGGDDFGSVTAGLARWAQVVFR >gi|289777623|gb|GG745508.1| GENE 402 453782 - 454465 792 227 aa, chain + ## HITS:1 COG:alkA KEGG:ns NR:ns ## COG: alkA COG0122 # Protein_GI_number: 16130008 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli K12 # 1 225 1 225 282 264 61.0 1e-70 MVLLPWTPPYDWAWMVGFLQARAVAGVERFDEGGYSRSFGVEGHRGLIHLAPDEEAQGLR VTLSPGLQPVAEICYARIGQLFDLACDPRQVAGALGSLAQARPGLRLPGALDAFEQAVRA VLGQLVSVAMAARLTAKVAAGWGEPLAEAPGYVLFPTPEALSRADPQALKALGMPLRRAE ALIHLARAALSGELPLTAPADIDAGLRQLQSLPGIGRWTANYFALAS >gi|289777623|gb|GG745508.1| GENE 403 454842 - 454988 87 48 aa, chain + ## HITS:1 COG:ECs2877 KEGG:ns NR:ns ## COG: ECs2877 COG0122 # Protein_GI_number: 15832131 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 45 235 279 282 78 80.0 3e-15 MPDDYLIKQRFPGMTPAVIARYARRWQPMRSYALLHIWYTDDWIPAAE >gi|289777623|gb|GG745508.1| GENE 404 455103 - 455744 845 213 aa, chain + ## HITS:1 COG:STM2122 KEGG:ns NR:ns ## COG: STM2122 COG0572 # Protein_GI_number: 16765452 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 390 92.0 1e-109 MTDMSHQCVIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE RVKTNYDHPSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGI LLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE >gi|289777623|gb|GG745508.1| GENE 405 455835 - 456416 839 193 aa, chain + ## HITS:1 COG:dcd KEGG:ns NR:ns ## COG: dcd COG0717 # Protein_GI_number: 16130005 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Escherichia coli K12 # 1 193 1 193 193 365 94.0 1e-101 MRLCDRDIEAWLDEGRLAINPRPPVERINGATVDVRLGNKFRTFRGHTAPFIDLSGPKAE VSAALDRVMSEEIVLPEGEAFFLHPGELALAVTYESVTLPADLVGWLDGRSSLARLGLMV HVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNRREDAKYR DQQGAVASRIDKD >gi|289777623|gb|GG745508.1| GENE 406 456471 - 458294 2475 607 aa, chain + ## HITS:1 COG:ZasmA KEGG:ns NR:ns ## COG: ZasmA COG2982 # Protein_GI_number: 15802546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 1 607 9 617 617 748 62.0 0 MILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLELDGPLRWHVWPQLSILSGRM TLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSAAPVV PHDNTLPQAPEDRGWSYDVRQLQVADSVLFFQHENGEQVTVRDIRLQMEQDENHRATVDF SGRINRDQRDLALSFSATVQGGDYPHSLKADFSQLSWQLRGAELPPDGINGQGSLQASWQ EDGKTLRFDNLNLMASGSTLTGNGSVVLGDRPDWSLDLHATTLNLDSLLAPSSPATDSSA SQQGQSQTRPLRPVIADSDEREDYQSLRGFNGRMALSADQLQWRGLNFTQVQSEISNQQG LLTVSKMQGNLDGGQLSLPGTLDARGDTPQATFQPALQNVEIGSLIKAFNYSLNLTGKLS LTGEFSGTRIDADDFRRHWQGQAQLQMADTRTEGLNFQQLVQQAVERSTNVRAQENYDNA TRLDSVSSQLTLDNGVVTLNRLQGQSDVMAMTGEGQLDLQKENCDMRFNVRVLGGWKGEG KLIDRLKQTAIPLRIYGDWQSLSYSLQVDQILRKQLQDEAKQRLNDWVERNKGSKESKDA KKLLDKL >gi|289777623|gb|GG745508.1| GENE 407 458870 - 460453 2163 527 aa, chain - ## HITS:1 COG:yegH_2 KEGG:ns NR:ns ## COG: yegH_2 COG1253 # Protein_GI_number: 16130003 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 232 527 1 296 296 466 80.0 1e-131 MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLLLAMVMRLL LLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQR RGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVIIAISLMLMASKALTRFVN SHPTIVILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLALFNRRRFLS ANMTLRQRTTEAVMNLLSGQKEKAELDADTASLVADQDHHPLFNPQERLMIERVLNLNQR SVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQS LRQEPLDLQVLVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMET IAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPLDDKREYHTVAGLLME YLQHVPQVGETIEIDGYTLRTLQVDSHRVQKVQIVPPVKQDELDYEV >gi|289777623|gb|GG745508.1| GENE 408 461230 - 462120 1196 296 aa, chain + ## HITS:1 COG:STM2098 KEGG:ns NR:ns ## COG: STM2098 COG1210 # Protein_GI_number: 16765428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 1 295 1 295 297 541 92.0 1e-154 MANLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSK NAVENHFDTSYELEALLEQRVKRQLLAEVQAICPPGVTIMNVRQAQPLGLGHSILCARPV VGDNPFVVVLPDIILDGGTADPLRYNLAAMVARFNETGRSQVLAKRMPGDLSEYSVIQTK EPMVAEGQVARIVEFIEKPDEPQTLDSDLMAVGRYVLSADIWAELERTQPGAWGRIQLTD AIAELAKKQSVDAMLMTGESYDCGKKMGYMQAFVTYGMRNLKEGTKFRESIKKLLA >gi|289777623|gb|GG745508.1| GENE 409 462514 - 463143 428 209 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1549 NR:ns ## KEGG: Kvar_1549 # Name: not_defined # Def: phosphoesterase PA-phosphatase related protein # Organism: K.variicola # Pathway: not_defined # 1 209 1 209 209 336 92.0 4e-91 MNWQLISFFGDSTVLLPSAAALFIVLMLRKTSRLLAWQWSLLFGITGAIVCASKLAFMGW GLGIRELDYTGFSGHSALSAAFWPIFLWLLSARFSSGLQKAAVATGYILAAVVGYSRLVI HAHSVSEVIAGLLLGAAGSALFLLLQKRISNSDYKTIPWGGVACLVMVPLILLHSGSKAP TQPLLEQIATAIGPLDKPFTREDLQKQAW >gi|289777623|gb|GG745508.1| GENE 410 464101 - 465534 1034 477 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1550 NR:ns ## KEGG: Kvar_1550 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 477 1 477 477 897 96.0 0 MIKIARIAVTLGLLSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEI ARALKKAKPSYSSEQVVLARINQRLSALKADFRITGYTSTDQPGTPQGFGQTQPADNSLG LAFNNSGEWWDVHLQGNVEGGERISNGSRFNANGAYGAVKFWNQWLSFGQVPQWWGPGYE GSLIRGDAMWPMTGFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYIAVPHAKIIGGR FTFSPFQSLELGASRIMQWGGEGRPESFSSFWDGFTGHDNTGTDNEPGNQLAGFDFKFKL EPTLGLPISFYAQMIGEDEAGFLPSANMYLGGIEGHHGWGKDAVNWYLETHDTRTNMSRI NYSYTHHIYKDGYYQQGYPLGDAMGGDGQLYAGKVELITEDNQRWSTRLVYAKVNPKNQS INKAFPQADTLKGVQVGWSGDVYQSVRLNTSLWYTNANNSDSDDVGASAGIEIPFSL >gi|289777623|gb|GG745508.1| GENE 411 465842 - 466816 -110 324 aa, chain + ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 324 55 378 379 528 78.0 1e-150 MTPGLIDQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSAS DTGNWVNSDGTIFYPYIGKVQVAGKTLSQVRQDIASRLTTYIESPQVDVSVAAFRSQKVY VTGEVTKSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKISLYALMQKGD LTQNHMLYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSD ATGVFVIRQLKGDKHGKIANIYQLNAQDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVI SQLVPTITGVHDMTETVRYIRTWP >gi|289777623|gb|GG745508.1| GENE 412 468964 - 469440 -146 158 aa, chain + ## HITS:1 COG:STM2116_2 KEGG:ns NR:ns ## COG: STM2116_2 COG0489 # Protein_GI_number: 16765446 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 158 85 240 240 195 55.0 3e-50 MRKGYLHKVFNVSNDIGMSDILSGKNHFSSAVKHLEPEGFHFIPRGQIPPNPAELLMSKR CGEFLDWASKEYDLIVIDTPPILAVTDAAILGRYVGTTLIVARFEANTAKEIDVSIKKFE QSGVQVKGCILNGVVKKASNYYGYGYSSYGYSYKDDTK >gi|289777623|gb|GG745508.1| GENE 413 470053 - 470739 201 228 aa, chain + ## HITS:1 COG:alr1000 KEGG:ns NR:ns ## COG: alr1000 COG0438 # Protein_GI_number: 17228495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 15 226 125 341 360 60 23.0 2e-09 MTGDESSVKLWSFFKKIKSKKVDYYVGISDYIKNKHIDAGFFDKDKAITIYNAVDNRDIS YNSTTSKGARNVGFIGRLTKEKGFDIFCRMAEKYNNQNFIAAGEFEYNKDAEELKELASK NNIKLLGHCPVTEFMKMVDLIVLPIKWQEPFGRVVLESVFSGKIILTNKVGGITELASML PNVYFLEDIQDLNDVPQYKQIPNQVFDKFNSESITREYEKIFEGLLNG >gi|289777623|gb|GG745508.1| GENE 414 471401 - 471895 -42 164 aa, chain + ## HITS:1 COG:no KEGG:GM18_0988 NR:ns ## KEGG: GM18_0988 # Name: not_defined # Def: group 1 glycosyl transferase # Organism: Geobacter_M18 # Pathway: not_defined # 2 163 221 376 393 68 29.0 1e-10 MPNNVGGIIWYLKNVHSDLLDYDKKIKLTIAGNAKNGISPELQEAINIYPKDAIELIKSP TDSELKKIYDNHSIFINPMLNGAGVKLKNLDAMRNSFYVVTTSVGAEGTGVENKKTSVVA DNPEDFRDAIIFGLKSENSEVIAHNAYNLIKNNFDIKSILKKIL >gi|289777623|gb|GG745508.1| GENE 415 472632 - 473162 -219 176 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290508638|ref|ZP_06548009.1| ## NR: gi|290508638|ref|ZP_06548009.1| serotype K2 polymerase [Klebsiella sp. 1_1_55] serotype K2 polymerase [Klebsiella sp. 1_1_55] # 1 176 243 418 418 268 99.0 2e-70 MVSFIIFKLYILPSLTNDIESYNSVATRLTMFVSGLTVFLYNPFGVGYYGYIPSIYAFTP DVISRIGSIFPILNFSEVQTYTIIGEYKAVGTKSMIIDCIMFFGLLFIIPFIFYIKRLSG YFLNNNDRASFILLLFVVLSNLFFIAYIGSYMTPFMLSFLTLRYRQNLKNNIEYVL >gi|289777623|gb|GG745508.1| GENE 416 473621 - 474238 44 205 aa, chain + ## HITS:1 COG:BMEII0835 KEGG:ns NR:ns ## COG: BMEII0835 COG0438 # Protein_GI_number: 17989180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Brucella melitensis # 5 160 50 210 307 80 30.0 2e-15 MAIRYGLKKDKLFVVYNGIQEPSLNITDDMNPFDSNKINILYVGRFDYQKGIDILFDIIN AAGTKYHFTLVGDTVHDSFNRPDLASVTYTGWLNSKQLAKYYKYADVTIMPSRWESFGLV AAESNSYGTPVIASNSSSLPEVVVDGATGYLFDLDNIQKALDLLNIKTKEDWNSMNENCH LNYIEKFKSSDMISNVERLYKKIKQ >gi|289777623|gb|GG745508.1| GENE 417 475253 - 475726 -6 157 aa, chain + ## HITS:1 COG:wzxC KEGG:ns NR:ns ## COG: wzxC COG2244 # Protein_GI_number: 16129986 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 157 327 484 492 127 50.0 7e-30 MQLLSLAGLLRAIGNPIGSLLMAKARVDLSFKFNVVKIFMFAPALYFGAKYAGVTGVAVG FLSVQTLNTILTYFVLIRPVLGKCYLEYISSIISPFLHVVPMIIVISFLNEVLTLDNKLF SLFIKILIGVLVYGITILVSKNTLLAEVKSAFLKRTK >gi|289777623|gb|GG745508.1| GENE 418 476296 - 476685 72 129 aa, chain + ## HITS:1 COG:BS_yvfF KEGG:ns NR:ns ## COG: BS_yvfF COG5039 # Protein_GI_number: 16080475 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Exopolysaccharide biosynthesis protein # Organism: Bacillus subtilis # 1 127 184 309 322 92 37.0 2e-19 MYMIRNDKEGSQQDKKYASYVKEDWDTICNINDKNKLKKLLFLEKINRATGFNIFDIESN WNKYTDAMLVRINNYFMSFDEVITSRMHGHILCCLLEVKTKVIDNSYGKNRGYYDSWTKY VPNCELITN >gi|289777623|gb|GG745508.1| GENE 419 476745 - 477728 -313 327 aa, chain + ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 3 231 6 228 328 99 29.0 8e-21 MSVSIIIPVYNVSSYLEEAINSVLKQISKNDEIIIVNDGSTDDSGEKIDRLYSNHPNVII IHTTNYGLGGARNNGLKHATKEFVYYFDSDDILSPGLIKSFYSIINNYPEIDLFVFSAKS FSDSSGSDKLPEYDRGIDALFSDGKQAFSYLYSQDRCYPNAWLYITRRKVIDINNLTFKS IIHEDEEYTPRLFNVAGQTIVTKNIYFNRRIRNNSIMQSKFSERNIIGYIESVNSQMELV KTSNGIFNKMLKLRIINNISIMYELIYHKNIQVSNNTKIELAKLIDSNKGLALFFLERSF FMFRVYRYFELKFRKRIKIPYYKTNNL >gi|289777623|gb|GG745508.1| GENE 420 479014 - 479508 -234 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290508643|ref|ZP_06548014.1| ## NR: gi|290508643|ref|ZP_06548014.1| conserved hypothetical protein [Klebsiella sp. 1_1_55] conserved hypothetical protein [Klebsiella sp. 1_1_55] # 1 164 418 581 581 325 100.0 5e-88 MDNIFINIVNSSFIALSKNINTVLVNQLFENDLNGWSISGDATVQSNVCHVSEQCLLLTN KAKIEQKVMVRGREIITGGVWVKAPNEDTIVRIMISFVDADGNLKKGKNFVFQKKGKYDW QWIRIGAIAPVDDCYCIFSFSSFALTDTTTYAYFDGLVINKANK >gi|289777623|gb|GG745508.1| GENE 421 480710 - 481294 -204 194 aa, chain + ## HITS:1 COG:ECs2852 KEGG:ns NR:ns ## COG: ECs2852 COG2148 # Protein_GI_number: 15832106 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Escherichia coli O157:H7 # 2 194 272 464 464 325 78.0 2e-89 MIFKRLEDIIVSSLILILISPILIIISCAVKLTSKGPVIFRQIRYGMDGKPIKVWKFRSM TVMENDDKVIQATKNDIRVTKVGKFLRSTSLDELPQFFNVLFGQMSVVGPRPHAVSHNEQ YRSLIQGYMLRHKVKPGITGLAQINGWRGETDTLEKMEKRIEYDLLYIRGWSIWLDLKII FLTVFKGFINKSAY >gi|289777623|gb|GG745508.1| GENE 422 481457 - 482863 1525 468 aa, chain + ## HITS:1 COG:gnd KEGG:ns NR:ns ## COG: gnd COG0362 # Protein_GI_number: 16129970 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli K12 # 1 468 1 468 468 890 95.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQEF VESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAGH YVKMVHNGIEYGDMQLIAEAYALLKGGLALSNEELAQTFTEWNEGELSSYLIDITKDIFT KKDEEGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAAS KVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYNWDLNYGEIAKIF RAGCIIRAQFLQKITDAYAQNAGIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPT FSAAIAYYDSYRSAVLPANLIQAQRDYFGAHTYKRTDKEGVFHTEWLE >gi|289777623|gb|GG745508.1| GENE 423 483106 - 483342 350 78 aa, chain + ## HITS:1 COG:STM2105_1 KEGG:ns NR:ns ## COG: STM2105_1 COG0836 # Protein_GI_number: 16765435 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Salmonella typhimurium LT2 # 2 75 8 81 343 119 71.0 1e-27 MLLPVIMAGGTGSRLWPMSRELYPKQFLRLFGQNSMLQETITRLSGLEIHEPMVICNEEH RFLVAEQLRQLNKLSLAS >gi|289777623|gb|GG745508.1| GENE 424 485711 - 486877 1843 388 aa, chain + ## HITS:1 COG:ECs2829 KEGG:ns NR:ns ## COG: ECs2829 COG1004 # Protein_GI_number: 15832083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 647 83.0 0 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLN FRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIP VGFTRDIKERLGIDNVIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAIK QDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYESVPNNIIAAIVDANRTRKDFIADSILARKPKVVG VYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDEFFNSRVVRDLDAFKQEA DVIISNRMAEELADVADKVYTRDLFGND >gi|289777623|gb|GG745508.1| GENE 425 487823 - 488827 1322 334 aa, chain - ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 1 334 1 335 343 436 62.0 1e-122 MKFLVTGAAGFIGFHIAQRLLNEGHDVVGIDNMNDYYDVSLKQARLDRLASPAFHFQQLD LADREGMAKLFAAEQFDRVIHLAAQAGVRYSLENPYAYADANLMGYLNILEGCRHTKVKH LVYASSSSVYGLNRKMPFSTEDSVDHPVSLYAATKKANELMAHTYSHLYSIPTTGLRFFT VYGPWGRPDMALFKFTKAMLEGKSIDVYNYGKMKRDFTYIDDIVEAVVRVQDVIPQANAD WTVESGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGMEAKKNMMPIQPGDVLDTSA DTQPLYDLVGFKPQTSVKEGVKNFVEWYKDYYQI >gi|289777623|gb|GG745508.1| GENE 426 489905 - 490141 303 78 aa, chain + ## HITS:1 COG:STM2105_1 KEGG:ns NR:ns ## COG: STM2105_1 COG0836 # Protein_GI_number: 16765435 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Salmonella typhimurium LT2 # 2 75 8 81 343 119 71.0 1e-27 MLLPVIMAGGTGSRLWPMSRELYPKQFLRLFGQNSMLQETITRLSGLEIHEPMVICNEEH RFLVAEQLRQLNKLSLAS >gi|289777623|gb|GG745508.1| GENE 427 491816 - 492610 451 264 aa, chain + ## HITS:1 COG:PA5451 KEGG:ns NR:ns ## COG: PA5451 COG1682 # Protein_GI_number: 15600644 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Pseudomonas aeruginosa # 4 264 5 265 265 256 56.0 2e-68 MRDLLTTIYRYRGFIWSSVKRDFQARYQTSMLGALWLVLQPLSMILVYTLVFSEVMKARM PDNTGPFAYSIYLCSGVLTWGLFTEMLDKGQSVFINNANLIKKLSFPKICLPIIVTLSAV LNFAIIFSLFLIFIIVTGNFPGWLFFSVIPVLLLQILFAGGLGMILGVMNVFFRDVGQLV GVALQFWFWFTPIVYVLNSLPAWAKNLLLYNPMTRVMQSYQSIFAYHQAPNWYSLWPVLA LAIIFCVIGFRMFRKHAADMVDEL >gi|289777623|gb|GG745508.1| GENE 428 492610 - 493824 601 404 aa, chain + ## HITS:1 COG:PA5450 KEGG:ns NR:ns ## COG: PA5450 COG1134 # Protein_GI_number: 15600643 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Pseudomonas aeruginosa # 1 404 1 405 421 527 61.0 1e-149 MSYIRVKNVGKAYRQYHSKTGRLIEWLSPLNTKRHNLKWILSDINFEVAPGEAVGIIGIN GAGKSTLLKLITGTSRPTTGEIEISGRVAALLELGMGFHSDFTGRQNVYMSGQLLGLSSE KITELMPQIEEFAEIGDYIDQPVRVYSSGMQVRLAFSVATAIRPDVLIIDEALSVGDAYF QHKSFERIRKFRLEGTTLLLVSHDKQAIQSICDRAILLNKGQIEMEGEPEAVMDYYNALL ADKQNQSIKQVEHNGKTQTVSGTGEVTISEVHLLDEQGNVTEFASVGHRISLQVNVEVKA DIPELVVGYMIKDRLGQPIFGTNTHHLKQTLTSLKKGEKRSFLFSFDARLGVGSYSVAVA LHTSSTHLGKNYEWRDLAVVFNVVNTEQQEFVGVSWLPPELEIS >gi|289777623|gb|GG745508.1| GENE 429 493824 - 495101 549 425 aa, chain + ## HITS:1 COG:aq_1079 KEGG:ns NR:ns ## COG: aq_1079 COG0500 # Protein_GI_number: 15606356 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Aquifex aeolicus # 4 216 213 414 416 124 36.0 4e-28 MGSSFYRSFEERHRGSVEDIKNRLSFYLPFLSRLKDLYPEGVIADIGCGRGEWLEILTEN GIANIGVDLDDGMLARAKEAGLNVQKMDCLQFLQNQADQSLIALTGFHIAEHLPFEVLQQ LVMHTLRVLKPGGLLILETPNPENVSVGTCSFYMDPTHNHPLPPPLLEFLPIHYGFNRAI TVRLQEKEALKSPDAAVNLVDVLKGVSPDYSIIAQKAAPADVLERFETLFTQQYGLTLDV LSNRYDAILRQQFSSFASQLETLNQTYTRQLSKMAENIQTLQGQVDELNHVIGQNNQLHQ QVADLHNSRSWRITQPLRWLSLQRQLLRQEGAKVRARRAAKKILRKGMALSLVFFHRYPK SKVYLFKFLRKTGCYTLLQRLFQRVMLVQSDTMMMQSRRYDVGTEEMTSRALSIYNELKN KNTEK >gi|289777623|gb|GG745508.1| GENE 430 495104 - 498745 1287 1213 aa, chain + ## HITS:1 COG:aq_1080 KEGG:ns NR:ns ## COG: aq_1080 COG0438 # Protein_GI_number: 15606357 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Aquifex aeolicus # 451 1147 129 823 885 457 35.0 1e-128 MRIVIDLQGAQTESRFRGIGRYSIAIARAIIRNNNRHEVFIALSAMLGESITDVKAQFAD LLPADNIVVWHAAGPVRAMDKGNEWRRESAELIREAFLESLRPDVVFITSLFEGHVDDAA TSVHKFSRQYKVAVLHHDLIPLVQAETYLLDDVFKSYYLQKVEWLKNADLLLTNSAYTAQ EAIEHLHLQGDHVQNIAAAADPQFCMAEVTASEKESVLGHYGIQREFVLYAPGGFDSRKN FKRLIEAYAGLSDALRRSHQLVIVSKLSIGDRQYLESLASGNGLQQGELVLTGYVPENEL IQLYRLCKLFIFASLHEGFGLPVLEAMSCGAPAIGSNVTSIPEVIGNPEALFDPYSVSSI REKIAQCLNDAPFLARLKEMAQQQARNFSWDNAAVTALEAFEKIATEDAGTVQVLPEALI QRILAISHCQPDERDLRLCATAIDYNLKTAELYQIDDKALTWRVEGPFDSSYSLALVNRE FARALSADGVEVLLHSTEGPGDFAPDASFMAQPENSDLLAFYNQCRTRKSNEKIDILSRN IYPPRVADMDAKVKLLHCYAWEETGFPQPWINEFNRELDGVLCTSEHVRKVLIDNGLNVP AFVVGNGCDHWLTTAAETAKDVDEGTFRFLHVSSCFPRKGVQAMLQAWGRAFTRRDNVIL IIKTFNNPHNEIDAWLAHAQAQFADYPKVEIIKEDMSASQLKGLYESCDVLVAPGCAEGF GLPIAEAMLSGLPAIVTNWSGQLDFVNSQNSWLVNYQFTRVKTHFGLFASTWASVDIDNL TDALKAAASTDKSVLRDMADAGRELILQQFTWKAVADRSRQAVKTLRAHIDIAQHRARIG WLTTWNTKCGIATYSQHLLESAPHGADVVFAPQVSAGDLVCADEEFVLRNWIVGKENNYL ENLQPQIDALRLDVIVIQFNYGFFNHRELSAFIRRQHDAGRAVVMTMHSTVDPLEKEPTW NFRLAEMADALALCDRLLVHSIADMNRLKDLGLTDNVALFPHGVINYAAGSAARQQQALP LIASYGFCLPHKGLMELVESVHRLKQAGKPVRLRLVNAEYPVGESRDLVAELKAAAQRLG VNDLIEMHNDFLPDAESLRLLSEADLLIFAYQNTGESASGAVRYGMATQKPVAVTPLAIF DDLDDAVFKFDGCSVDDISQGIDRILHSIREQDAWATRTQQRADAWREQHDYYAVSRRLV NMCQGLAKAKYFK >gi|289777623|gb|GG745508.1| GENE 431 498813 - 499958 1253 381 aa, chain + ## HITS:1 COG:PA5448 KEGG:ns NR:ns ## COG: PA5448 COG0438 # Protein_GI_number: 15600641 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 1 379 1 370 375 215 34.0 9e-56 MKIIFATEPIKYPLTGIGRYSLELVKRLAVAREIEELKLFHGASFIDQIPQVENKSDTKA SNHGRLSAFLRRQPLLIEAYRLLHPRRQAWALRDYKDYIYHGPNFYLPHRLERAVTTFHD ISIFTCPEYHPKDRVRYMEKSLHESLDSAKLILTVSDFSRSEIIRLFNYPADRIVTTKLA CSSDYIPRSPAECLPVLQKYQLAWQGYALYIGTMEPRKNIRGLLQAYQLLPMETRMRYPL ILSGYRGWEDDVLWQLVERGTREGWIRYLGYVPDEDLPYLYAAARTFVYPSFYEGFGLPI LEAMSCGVPVVCSNVTSLPEVVGDAGLVADPNDVDAISAHILQSLQDDSWREIATARGLA QAKQFSWENCTTQTINAYKLL >gi|289777623|gb|GG745508.1| GENE 432 499968 - 501083 1218 371 aa, chain + ## HITS:1 COG:PA5447 KEGG:ns NR:ns ## COG: PA5447 COG0438 # Protein_GI_number: 15600640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 1 371 1 372 381 372 50.0 1e-103 MRVLHVYKTYYPDTYGGIEQVIYQLSQGCARRGIAADVFTFSPDKETGPVAYEDHRVIYN KQLFEIASTPFSLKALKRFKQIKDDYDIINYHFPFPFMDMLHLSARPDARTVVTYHSDIV KQKRLMKLYQPLQERFLASVDCIVASSPNYVASSQTLKKYQDKTVVIPFGLEQHDVQHDP QRVAHWRETVGDNFFLFVGAFRYYKGLHILLDAAERSRLPVVIVGGGPLEAEVRREAQQR GLSNVVFTGMLNDEDKYILFQLCRGVVFPSHLRSEAFGITLLEGARFARPLISCEIGTGT SFINQDKVNGCVIPPNDSQALVEAMNELWHNDETASRYGENSRRRFEEMFTADHMIDAYV NLYTTLLESKS >gi|289777623|gb|GG745508.1| GENE 433 501122 - 501718 821 198 aa, chain - ## HITS:1 COG:hisI_1 KEGG:ns NR:ns ## COG: hisI_1 COG0139 # Protein_GI_number: 16129967 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli K12 # 1 108 1 112 112 199 83.0 3e-51 MLTEQLDWEKTDGMMPAIVQHAVSGEVLMLGYMNKEALEKTEATGKVTFYSRTKQRLWTK GETSGNVLNVVSITPDCDNDTLLVLVNPIGPTCHKGTTSCFGETGHQWLFLYQLEQLLAE RKHADPESSYTAKLYASGTKRIAQKVGEEGVETALAATVNDRFELKNEASDLMYHLLVLL QDQGLDLGEVIDNLKSRH >gi|289777623|gb|GG745508.1| GENE 434 501712 - 502488 1136 258 aa, chain - ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 503 95.0 1e-142 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGADELVFYDITASSDGRV VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAQILSFGADKISINSPALADPTLITRLADRF GVQCIVVGIDTWFDAETGKYHVNQYTGDETRTRVTQWETLDWVEEVQKRGAGEIVLNMMN QDGVRNGYDLQQLAKVRAVCHVPLIASGGAGTMEHFLEAFRDANVDGALAASVFHKQIIN IGELKAYLAAQGVEIRVC >gi|289777623|gb|GG745508.1| GENE 435 502470 - 503207 1066 245 aa, chain - ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 424 89.0 1e-119 MIIPALDLIDGTVVRLHQGDYGQQRDYGSDPLPRLQSYAAQGAEVLHLVDLTGAKDPAKR QIPLLKSLVAGVDVPVQVGGGVRTEADVAALLEAGVARVVVGSTAVKSPEEVKGWFKRFG PERLVLALDVRIDADGNKQVAVSGWQENSGVTLEELVESYLPVGLQHVLCTDISRDGTLA GSNVSLYEEVCARYPQVAFQSSGGIGDLKDIAALRGTGVRGVIVGRALLEGKFNVTEAIQ CWQNG >gi|289777623|gb|GG745508.1| GENE 436 503207 - 503797 877 196 aa, chain - ## HITS:1 COG:hisH KEGG:ns NR:ns ## COG: hisH COG0118 # Protein_GI_number: 16129964 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 374 88.0 1e-104 MNVVILDTGCANLNSVKSAIGRHGYEPVVSRDPEVVLRADKLFLPGVGTAQAAMDQLRDR DLIDLIKACTQPVLGICLGMQLLGKRSEENNGVDLLGIIEEEVPKMTDHGLPLPHMGWNR VYAKAGDRLFRGIEEGAYFYFVHSYAMPVNPYTIAQCNYGEAFTAAVQKDNFFGVQFHPE RSGSAGAQLLKNFLEM >gi|289777623|gb|GG745508.1| GENE 437 503797 - 504864 1693 355 aa, chain - ## HITS:1 COG:hisB_2 KEGG:ns NR:ns ## COG: hisB_2 COG0131 # Protein_GI_number: 16129963 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Escherichia coli K12 # 149 355 1 207 207 400 92.0 1e-111 MTQKYLFIDRDGTLISEPPVDFQVDRFDKLAFEPQVIPALLKLQQEGYKLVMITNQDGLG TDSLPQEAFDGPHNLMMQIFASQGVNFEEVLICPHFPGDNCACRKPKTQLVLPWLEDGVL DKSHSYVIGDRATDLELADNMGITGLRYDRETLDWPTISEQLTRRDRYAHVERITKETQV DVKVWLDREGGSKIHTGVGFFDHMLDQIATHGGFRMEINVGGDLYIDDHHTVEDTGLALG EALKLALGDKRGINRFGFVLPMDECLARCALDISGRPHLEYKADFTYQRVGDLSTEMVEH FFRSLSYTMAVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVQGDALPSSKGVL >gi|289777623|gb|GG745508.1| GENE 438 504861 - 505922 1371 353 aa, chain - ## HITS:1 COG:ECs2822 KEGG:ns NR:ns ## COG: ECs2822 COG0079 # Protein_GI_number: 15832076 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli O157:H7 # 1 353 4 356 356 598 83.0 1e-171 MSIEDLARANVRALTPYQSARRLGGKGDVWLNANEFPTAVAFQLTAQTMNRYPEPQPKAV IESYARYADVKPEQVLVSRGADEGIELLIRAFCEPGKDALLYCPPTYGMYSVSAETIGVE CRTVPTLADWQLDLPGIEAQLDGVKVVFVCSPNNPTGQIIDPQSIRDLLEMTRDKAIVVA DEAYIEFCPQATLAGWLSDYPHLVVLRTLSKAFALAGLRCGFTLANAEVINVLLKVIAPY PLSTPVADIAAQALSAEGITAMRQRVAQILDERRYLVEQLRGIACVEQVFDSEANYVLAR ITASSAVFKSLWDQGIILRDQNKQPSLSGCLRITIGTRAESQRVIDALTAENV >gi|289777623|gb|GG745508.1| GENE 439 505919 - 507223 1804 434 aa, chain - ## HITS:1 COG:ECs2821 KEGG:ns NR:ns ## COG: ECs2821 COG0141 # Protein_GI_number: 15832075 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 698 88.0 0 MSFNTIIDWNGCSADQQQQLLTRPAISASDSISKTVAEILDNVKANGDAALREYSAKFDK TTVAALQVSEAEIAAAGERLSDELKQAMAVAVKNIETFHNAQQLQAVDVETLPGVRCQQV TRPIASVGLYIPGGSAPLFSTVLMLATPARIAGCQQVVLCSPPPIADEILYAAQLCGVKT IFNVGGAQAIAALALGTESVPKVDKIFGPGNAYVTEAKRQVSQRLDGAAIDMPAGPSEVL VIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADLGSRVAEAVERQLAALPRAETARV ALSASRIIVARDLAQCVAISNQYGPEHLIIQTRQARELVDSITSAGSVFLGDWSPESAGD YASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSRDGFAALASTIEILAAAERLDAHK NAVTLRVAALKEQA >gi|289777623|gb|GG745508.1| GENE 440 507263 - 508162 1396 299 aa, chain - ## HITS:1 COG:STM2071 KEGG:ns NR:ns ## COG: STM2071 COG0040 # Protein_GI_number: 16765401 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 299 548 94.0 1e-156 MLDNTRLRIAIQKSGRLSEDSRELLSRCGIKVNLHTQRLIALAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLSRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWNGPA ALDGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMADAKQQLIDRLLTRIQGVIQARESKYIMMHAPTERLEE VVALLPGAERPTILPLAGDKQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME >gi|289777623|gb|GG745508.1| GENE 441 508535 - 509359 1039 274 aa, chain + ## HITS:1 COG:ECs2818 KEGG:ns NR:ns ## COG: ECs2818 COG0451 # Protein_GI_number: 15832072 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 439 81.0 1e-123 MKKVAIVGLGWLGMPLALSLMARGWQVTGSKTTQDGVEAARMCGIDSYPLRLEPQLVCDT EDLDALMNVDALVITLPARRTGAGEGFYLQAVQEIVDTALAHHIPRIVFTSSTSVYGNVN GTVKENSPRLPQTASGQVLKELEDWLHNLPGTSVDILRLAGLVGPSRHPGRFFAGKSAPD GQHVVNLVHLQDVVAAIELLLQAPKGGHIYNLCAPRHPARGLFYPQMARELGLPPPVFSD SPDGGQGKIVDGNRICNELGFEYQYPDPLVMPME >gi|289777623|gb|GG745508.1| GENE 442 509398 - 510288 1063 296 aa, chain + ## HITS:1 COG:ECs2817 KEGG:ns NR:ns ## COG: ECs2817 COG0583 # Protein_GI_number: 15832071 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 291 8 306 316 328 57.0 6e-90 MKPLLDVLVILDALEKEGSFAAASAKLFKTPSALSYTIHRLESDLNIQLLDRSGHRARFT PTGQMLLEKGREVLHIARELEIRAVKLQQGWEHTLRLAVDCTFPVTQLSPLIAAFYQQQP LTRLHFTQNPSLLDWRPLTDGQADLLLGALGEPPSLSGYDYLPLGELELLLVVSPQHPLA RHRAPLSWRTLRRYRAVATGEGGALLSDQETLTVCDAAGQLALLRMGLGWGCLPRYQVQG LLESGELISMAVRGLSPRQHAWIAWNDATCGLASKWWREMLLANSAIFTIYHTEIV >gi|289777623|gb|GG745508.1| GENE 443 510578 - 511936 2260 452 aa, chain + ## HITS:1 COG:STM2068 KEGG:ns NR:ns ## COG: STM2068 COG0531 # Protein_GI_number: 16765398 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 452 3 454 454 807 97.0 0 MSHNATPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVSGMTDGHVPTAYAFALI AILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMINILLAKIY FEALVPSIPSWVFVIALVAFMTAFNLRSIKSVANFNTVIVVLQVVLIAVILGMVIYGVFE GEGAGTLASSRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSEETKDAERVIPRAIFL TALIGGLIFIFATYFLQLYFPDISRFKDPDASQPEIMLYVAGKAFQVGALIFSTITVLAS GMAAHAGVARLMYVMGRDGVFPKSFFGYVHPTWRTPAMNIILVGAIALLAINFDLVMATA LINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEESSM ILGLIWAGIGLVYLACVTKSFRNPVPQYEDVA >gi|289777623|gb|GG745508.1| GENE 444 513648 - 514163 496 171 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1585 NR:ns ## KEGG: Kvar_1585 # Name: not_defined # Def: NifQ family protein # Organism: K.variicola # Pathway: not_defined # 1 171 1 171 171 329 98.0 3e-89 MVPVDWLTRLWRLYHAGKGCFPLRMGLTPAAWRSLQQRLGEVATPLDSATLSRRRLMTEL NATRDEERRQLGQWLTEWMAPGAEPMAQIVAEVALAFNHLWEDLGLDSRAELGRLMSDCF PQLVVQNVHHMRWKKFFYRQRCLQSQGEIVCRSPSCDECLERSLCFESPPL >gi|289777623|gb|GG745508.1| GENE 445 514163 - 515569 1504 468 aa, chain - ## HITS:1 COG:all1517 KEGG:ns NR:ns ## COG: all1517 COG0535 # Protein_GI_number: 17229009 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Nostoc sp. PCC 7120 # 2 433 14 453 475 439 46.0 1e-123 MTSCSSFSGGNACQSADASALAPRVADKVAAHPCYSRSGHHRFARMHLPVAPACNLQCNY CNRKFDCSNESRPGVSSTLLTPEQAVLKVRQVAQAIPQLSVVGIAGPGDPLANMTRTFRT LELVRDQLPDLKLCLSTNGLMLPDAVDRLLEVGVDHVTVTINTLDADIAGQIYAWLWLDG ERYRGREAGEILIARQLEGVRRLTAAGVLVKINSVLIPGINDGGMAEVGRRLRESGAFIH NIMPLIARPEHGTVFGLNGQPEPDAGMLAAIRSQCGEVMPQMTHCHQCRADAIGMLGEDR SQQFTRLPDPDSLPDWLPILHQRAELHASLATQGESDADDACLVAVASRHGEVIDCHFGH ADRFSIYSLSAAGMVLVGERFTPKYCRGEEECEPQENEARLAALLALLADVKAVFCVRIG HTPWQQLELQGIEPQVDGAWRSVAEVLPAWWQRRRQSLAASRLRQGVA >gi|289777623|gb|GG745508.1| GENE 446 515734 - 517308 1836 524 aa, chain - ## HITS:1 COG:aq_218 KEGG:ns NR:ns ## COG: aq_218 COG3604 # Protein_GI_number: 15605774 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Aquifex aeolicus # 15 523 2 504 506 342 38.0 7e-94 MIPESDPDTTVRRFDLSQQFTAMQRISVVLSRATEASKTLQEVLSVLHNDAFMQHGMICL YDSEQEILSIEALQQTGQQPLPGSTQIRYRPGEGLVGTVLAQGQSLVLPRVADDQRFLDR LSLYDYDLPFIAVPLMGPNARPIGVLAAQPMARQEERLPACTRFLETVANLVAQTIRLMI LPASPALSSRQPPKVERPPACSSSRGVGLDNMVGKSPAMRQIVEVIRQVSRWDTTVLVRG ESGTGKELIANAIHHHSPRAGAAFVKFNCAALPDTLLESELFGHEKGAFTGAVRQRKGRF ELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEV RLGHFREDLYYRLNVMPIALPPLRERQEDIAELAHFLVRKIGQHQGRTLRISEGAIRLLM EYSWPGNVRELENCLERSAVMSESGLIDRDVILFTHQDRPAKALPASGPAEDSWLDNSLD ERQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQIMDITLPRL >gi|289777623|gb|GG745508.1| GENE 447 517305 - 518789 1794 494 aa, chain - ## HITS:1 COG:slr1305_2 KEGG:ns NR:ns ## COG: slr1305_2 COG2202 # Protein_GI_number: 16329450 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Synechocystis # 32 137 172 277 277 90 38.0 6e-18 MTLNMMLDNAAPEAIAGALIQQHPGLFFTMVEQASVAISLTDASARIIYANPAFCRQTGY SLAQLLNQNPRLLASSQTPREIYQEMWHTLLQRQPWRGQLINQRRDGGLYLVEIDITPVL SPQGELEHYLAMQRDISVSYTLEQRLRNHMTLMEAVLNNIPAAVVVVDEQDRVVMDNLAY KTFCADCGGRELLTELQVSPGRMTPGVEAILPVALRGAARWLSVTCWPLPGVSEEASRYF IDSALARTLVVIADCTQQRQQQEQGRLDRLKQQMTAGKLLAAIRESLDAALIQLNCPINM LAAARRLNGEGSGNVALEAAWREGEEAMARLQRCRPSLELENPAVWPLQPFFDDLCALYR TRFDPDGLQVDMASPHLIGFGQRTPLLACLSLWLDRTLALAAELPSVPLAMQLYAEENDG WLSLYLTDNVPLLQVRYAHSPDALNSPGKGMELRLIQTLVAHHRGAIELASRPQGGTCLT LRFPLFNTLTGGEA >gi|289777623|gb|GG745508.1| GENE 448 519109 - 519639 842 176 aa, chain + ## HITS:1 COG:ECs0715 KEGG:ns NR:ns ## COG: ECs0715 COG0716 # Protein_GI_number: 15829969 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 175 1 168 176 136 43.0 2e-32 MANIGIFFGTDTGKTRKIAKMIHKQLGEAAAAPVNINRATLADLLAYPALLLGTPTLGDG QLPGLEAGGESESWAEFIRNLGDVSLQGKTVALFGLGDQRGYPDNFASGLRPLYDALRAR GATMIGSWPNEGYEFSASSALEGDRFVGLVLDQDNQFDETDARLATWLEEIKPHLL >gi|289777623|gb|GG745508.1| GENE 449 519662 - 520462 917 266 aa, chain - ## HITS:1 COG:NMB0281 KEGG:ns NR:ns ## COG: NMB0281 COG0760 # Protein_GI_number: 15676205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 126 244 208 326 348 68 35.0 1e-11 MEPWQRFGRQRLAQSRWNCEPAAIDAVDRQAFEAAWQRQAQMEQLIVAQIAPEAIPAALL EGLATSLGAWLDEGGFTPAERAAIVLHHARLETAFAGIASQAPRPDPATVQAWYLRHQAQ FMRPEQRLTRHLLLTVDGDDQAVYSRIRELHGQIEASREAFAPLAQRHSHCPSALDGGRL GWIGRGLLYPQLEEALFALAENALSAPVASELGWHLVWCEAIRPAAPMTPEQALESARDY LSQQSQRRHQRQWLAEMLARQPGLCG >gi|289777623|gb|GG745508.1| GENE 450 520462 - 520905 591 147 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1591 NR:ns ## KEGG: Kvar_1591 # Name: not_defined # Def: NifZ family protein # Organism: K.variicola # Pathway: not_defined # 1 147 1 147 147 290 99.0 2e-77 MRPRFTFSEAVRVVRAIRNDGTYAGLPSGALLVRRGSIGYVRDWGVFLQDQIIYQIHFPD CDRVVGCREQELIAGDRPWLAGNLQYGDSVICQTALAMQGEMVVSVGQLGRIEATGRGEH GDGYIVDFGGRWFQVPVSALALAEEEE >gi|289777623|gb|GG745508.1| GENE 451 520902 - 521159 303 85 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1592 NR:ns ## KEGG: Kvar_1592 # Name: not_defined # Def: NifW protein # Organism: K.variicola # Pathway: not_defined # 1 85 1 85 85 159 100.0 3e-38 MEWFYQIPGVGDLRSADAFFQFFAVPYQPERLAHCSLPVLATFHRKLKAEVPLLNQLEDN PRAHWLLARRLLAESYQQQFEENTP >gi|289777623|gb|GG745508.1| GENE 452 521162 - 522304 1573 380 aa, chain - ## HITS:1 COG:alr1407 KEGG:ns NR:ns ## COG: alr1407 COG0119 # Protein_GI_number: 17228902 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Nostoc sp. PCC 7120 # 1 363 1 363 377 279 44.0 8e-75 MGRVLINDTTLRDGEQSPGVAFQASEKIAIAEALYAAGIEAMEVGTPAMGEEECARIRQV RRQLPGATLMTWCRMQAGEIRQSADLGMDWVDISIPASDKLRQYKLREGLPLLLERLAAL IHLAHTLGLKVCIGCEDASRASDATLQDIAHLAREAGATRLRYADTVGILDPFTTAAQIA ALRRVWPGELEMHAHNDLGLATANTLAAVRAGATSVNTTVLGLGERAGNAALETVALGLE RCLEVKTGVRFTALPALCEQVALATRRPVDPQQPLVGELVFTHESGVHVAALLRDSESYQ AIDPALLGRGYRLVLGKHSGRQAVNGVFDRMGYHLTSAQIDQLLPALRRFAENGKRSPRD DELAAIYHALCSAETLQARG >gi|289777623|gb|GG745508.1| GENE 453 522320 - 523522 1352 400 aa, chain - ## HITS:1 COG:all1457 KEGG:ns NR:ns ## COG: all1457 COG1104 # Protein_GI_number: 17228951 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Nostoc sp. PCC 7120 # 1 387 1 393 400 454 56.0 1e-127 MKPVYLDNNATTRLDPMVLDAMMPFLTDFYGNPSSIHDFGLPAQAALERAHQQVAALLGA DYPSEIIFTSCATEATTTAIASAVALMPERREIITSAVEHPATLAVCEQLERQGYLIHRI AVDQQGALDMAQFRAALSPRVALVSIMWANNETGVMFPVPELAELAHEQGALFHCDAVQV VGKIPMTLSQTRIDMLSCSAHKFHGPKGVGCLWLRRGTRFRPLLRGGHQAHGRRAGTENI SGIVGMGAASELAQVHLPGMAQISQLRDRLEQHLQVTIPAVTVMGGSQPRVPGTLNLAFE CIEGEAILLLMNQAGIAASSGSACTSGSLEPSHVMRAMNIPYTAAHGTIRFSLSRYTREK EIDYVIATLPSVIDRLRALSPYWRQGQPHLQGGAFTPVYG >gi|289777623|gb|GG745508.1| GENE 454 523538 - 524377 1110 279 aa, chain - ## HITS:1 COG:all1456_1 KEGG:ns NR:ns ## COG: all1456_1 COG0822 # Protein_GI_number: 17228950 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Nostoc sp. PCC 7120 # 1 175 1 183 183 200 54.0 3e-51 MWNYSEKVKDHFFHPRNARVVDNANAVGDVGSLSCGDALRLMLRVDPQTEIIEEAGFQTF GCGSAIASSSALTELIIGHTLTEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAH FRGESLEEEHEEGKLICKCFGVDEGHIRRAVVNNGLTTLEEVINYTKAGGGCTACHEKIE LALAAILAQQPPAPLPAETAHDAHWQSVVDTINELRPHIQADGGDMTLLNVTPRQVTVSL SGSCSGCMMTDMTLAWLQQKLMERTGTYMDVVAAPAAVN >gi|289777623|gb|GG745508.1| GENE 455 524572 - 525042 546 156 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1596 NR:ns ## KEGG: Kvar_1596 # Name: not_defined # Def: dinitrogenase iron-molybdenum cofactor biosynthesis protein # Organism: K.variicola # Pathway: not_defined # 1 156 1 156 156 302 100.0 3e-81 MPPINRQFDMVHADEWSMKVAFASSDYRHVDQHFGATPRLVVYGVKADRVTLLRVVEFPV ASGHQTEKIAERIHALEDCVTLFCVAIGEAVFRQLLQVGVRAERVPDQTTILGLLQEIQL SWYEKAQRRSARQRDPQRFNRLLEEPAWREEPDPLP >gi|289777623|gb|GG745508.1| GENE 456 525029 - 526414 1480 461 aa, chain - ## HITS:1 COG:all1437 KEGG:ns NR:ns ## COG: all1437 COG2710 # Protein_GI_number: 17228932 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Nostoc sp. PCC 7120 # 1 432 1 426 444 321 39.0 2e-87 MADIIRSEKPLAVSPIKTGQPLGAILASLGLAQAIPLVHGAQGCSAFAKVFFIQHFHDPV PLQSTAMDPTATIMGADGNIFTALDTLCQRHSPQAIVLLSTGLAEAQGSDIARVVRQFRE AHPRHNGVAILTVNTPDFFGSMENGYSAVIESVIEQWVAPTPRPGQRPRRVNLLVSHLCS PGDIEWLGRCVEAFGLQPVILPDLSQSMDGHLGEGDFTPLTQGGASLRQIAQMGQSLGSF AIGVSLQRAASLLTQRSRGDVIALPHLMTLDHCDTFIHQLAKMSGRRVPAWIERQRGQLQ DAMIDCHMWLQGQRMAMAAEGDLLAAWCDFARSQGMQPGPLVAPTSHPSLRQLPVEQVVP GDLEDLQQLLSHQPADLLVANSHARDLAEQFALPLIRVGFPLFDRLGEFRRVRQGYAGMR DTLFELANLLRDRHHHTALYRSPLRQGADPQPASGDAYAAH >gi|289777623|gb|GG745508.1| GENE 457 526424 - 527797 1771 457 aa, chain - ## HITS:1 COG:all1438 KEGG:ns NR:ns ## COG: all1438 COG2710 # Protein_GI_number: 17228933 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Nostoc sp. PCC 7120 # 5 456 7 454 480 531 56.0 1e-151 MKGKEILALLDEPACEHNQKQKSGCSAPKPGATAGGCAFDGAQITLLPIADVAHLVHGPI GCAGSSWDNRGSVSAGPALNRLGFTTDLNEQDVIMGRGERRLFHAVRHIVDRYHPAAVFI YNTCVPAMEGDDLEAVCQAAQTATGVPVIAIDAAGFYGSKNLGNRMAGDVMLRQVIGQRE PAPWPDNTPFAPAQRHDIGLIGEFNIAGEFWQVQPLLDELGIRVLGSLSGDGRFAEIQTL HRAQANMLVCSRALINVARGLELRYGTPWFEGSFYGIRATSDALRQLATLLGDDDLRRRT DALIAREEQAAEQALAPWREQLRGRKVLLYTGGVKSWSVVSALQDLGMTVVATGTRKSTE EDKQRIRELMGDEAVMLEEGNARTLLDVVYRYQADLMIAGGRNMYTAWKARLPFLDINQE REHAYAGYQGIITLARQLCLTLASPVWPQTHTRAPWR >gi|289777623|gb|GG745508.1| GENE 458 528513 - 529175 551 220 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1599 NR:ns ## KEGG: Kvar_1599 # Name: not_defined # Def: dinitrogenase iron-molybdenum cofactor biosynthesis protein # Organism: K.variicola # Pathway: not_defined # 1 220 1 220 220 409 99.0 1e-113 MSDNDTLFWRLLALFQTLPELQPVQVVDWLAQECGETLTPARLTTLTQPQLAASFPSATA VMSPARWARVIACLQGVLPGHLRIARPPQRTPQLRVAFCSQDGLAINGHFGQNRLFFIYA FDDQGGWLADLRRYASSSAASDASEMRARLLEDCHLLFCQEIGGPAAARLIRHQIHPMKA PPGTTIQAQCDAVSTMLAGRLPPWLAKRLNRDNPLEERVF >gi|289777623|gb|GG745508.1| GENE 459 529186 - 529404 292 72 aa, chain - ## HITS:1 COG:no KEGG:KPK_1711 NR:ns ## KEGG: KPK_1711 # Name: nifT # Def: probable nitrogen fixation protein FixT # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 72 1 72 72 138 100.0 9e-32 MPIVIFRERGEALYAYIAKQDLEARVLQVEHDETDRWGGAIALEGGRRYYVNPQPGRPVF PISLRATRSTLL >gi|289777623|gb|GG745508.1| GENE 460 529444 - 531006 2455 520 aa, chain - ## HITS:1 COG:all1440 KEGG:ns NR:ns ## COG: all1440 COG2710 # Protein_GI_number: 17228935 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Nostoc sp. PCC 7120 # 1 520 1 512 512 563 51.0 1e-160 MSQTIDKIHSCYPLFEQDEYQTLFQNKKTLEEAHDAQRVQEVFAWTTTAEYEALNFQREA LTVDPAKACQPLGAVLCALGFAGTLPYVHGSQGCVAYFRTYFNRHFKEPVACVSDSMTED AAVFGGNNNMNLGLQNASALYKPEIIAVSTTCMAEVIGDDLQAFIANAKKEGFVDDSIAI PYAHTPSFIGSHVTGWDNMFEGFAKTFTADYAGQPGKQQKLNLVTGFETYLGNFRVLKRM MAQMDVPCSLLSDPSEVLDTPADGHYRMYAGGTSQQEIKTAPDAIDTLLLQPWQLVKSKK VVQEMWNQPATEVAVPLGLAATDALLMTVSQLTGKPIADALTLERGRLVDMMLDSHTWLH GKKFGLYGDPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMKKMLDASPYGQESEVFI NCDLWHFRSLMFTRQPDFMIGNSYGKFIQRDTLAKGKAFEVPLIRLGFPLFDRHHLHRQT TWGYEGAMNIVTTLVNAVLEKLDHDTSQLGKTDYSFDLVR >gi|289777623|gb|GG745508.1| GENE 461 531062 - 532510 2244 482 aa, chain - ## HITS:1 COG:all1454 KEGG:ns NR:ns ## COG: all1454 COG2710 # Protein_GI_number: 17228936 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Nostoc sp. PCC 7120 # 7 478 11 486 497 712 67.0 0 MTNATGERNLALIQEVLEVFPETARKERRKHMMISDPQMESVGKCIISNRKSQPGVMTVR GCAYAGSKGVVFGPIKDMAHISHGPIGCGQYSRAGRRNYYTGVSGVDSFGTLNFTSDFQE RDIVFGGDKKLTKLIEEMEQLFPLTKGITIQSECPVGLIGDDISAVANASSKALDKPVIP VRCEGFRGVSQSLGHHIANDVVRDWVLNNREGQPFASTPYDVAIIGDYNIGGDAWASRIL LEEMGLRLVAQWSGDGTLVEMENTPFVKLNLVHCYRSMNYIARHMEEKHQIPWMEYNFFG PTKIAESLRKIADQFDDTIRANAEAVIAKYEGQMAAIIAKYRPRLEGRKVLLYMGGLRPR HVIGAYEDLGMEIIAAGYEFAHNDDYDRTLPDLKEGTLLFDDASSYELEAFVKALKPDLI GSGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMTLNNPAWNELTAPWLK SA >gi|289777623|gb|GG745508.1| GENE 462 532527 - 533408 1265 293 aa, chain - ## HITS:1 COG:all1455 KEGG:ns NR:ns ## COG: all1455 COG1348 # Protein_GI_number: 17228949 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrogenase subunit NifH (ATPase) # Organism: Nostoc sp. PCC 7120 # 3 287 6 291 295 419 72.0 1e-117 MTMRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILHAKAQNTIME MAAEVGSVEDLELEDVLQIGYGDVRCAESGGPEPGVGCAGRGVITAINFLEEEGAYEEDL DFVFYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGIVKYAKSGKVRL GGLICNSRKTDREDELIIALAEKLGTQMIHFVPRDNIVQRAEIRRMTVIEYDPTCQQANE YRQLAQKIVNNTKKVVPTPCTMDELESLLMEFGIMEEEDTSIIGKTAAEENAA >gi|289777623|gb|GG745508.1| GENE 463 533812 - 537327 4370 1171 aa, chain + ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 5 404 4 403 413 622 73.0 1e-177 MSGNMKTMDGNTAAAWISYAFTDVAAIYPITPSTPMAENVDEWAAKGKKNLFGQPVRLME MQSEAGAAGAVHGALQAGALTTTYTASQGLLLMIPNLYKIAGELLPGVFHVSARALATNS LNIFGDHQDVMAVRQTGCAMLVENNVQQVMDLSAVAHLAAIAGRIPFINFFDGFRTSHEI QKIEVLAYEQLATLLDRPALERFRRQALHPDHPVIRGTAQNPDIYFQEREAGNRFYLALP DLVESYMAKITALTGREYHLFNYHGAPDAERVIIAMGSVCDTVQEVVETLNAAGEKVGLL SVHLYRPFSLAHFFAQLPASVQRIAVLDRTKEPGAQAEPLCLDVKNAFYQRDDAPLIVGG RYALGGKDVLPNDIAAVFDNLRQPLPKDGFTLGIVDDVTFTSLPARQEPLAVSHAGITAC KFWGMGSDGTVGANKSAIKIIGDNTPLYAQAYFSYDSKKSGGITVSHLRFGDRPITSPYL IHRADFIACSQQSYVDRYDLLEGLKPGGTFLLNCSWSEAELEQHLPVSVRRYLAQEKIDF YTLNAVDIARELGLGGRFNMLMQAAFFKLTAIIDPQTAADYLKQAVEKSYGSKGASVIEM NQRAIELGMAALHRVTVPAHWATLEAPAPQASALMPDFIRDILQPMNRQRGDLLPVSAFA GMEDGTFPSGTAAWEKRGIALEVPVWQPDGCTQCNQCAFVCPHAAIRPALLSAEEQDTAP AGLLSKPAQGAKDYHYHLAISPLDCSGCGNCVESCPSRGKALQMVSLDSQRAMAPVWDYA LGLAPKDNPFRKTTVKGSQFETPLLEFSGACAGCGETPYARLITQLFGDRMLIANATGCS SIWGASAPSMPYTTNHRGHGPAWANSLFEDNAEFGLGMMLGGQAIRQQIAEELTAALALP VSDALHAAMRQWLAQQDEGEGTRERADRLSALLAAEKEGVPLLEQLWQNRDYFVRRSQWI FGGDGWAYDIGFGGLDHVLASGEDVNILVFDTEVYSNTGGQSSKSTPVAAIAKFAAQGKR TRKKDLGMMAMSYGNVYVAQIAMGADKDQTLRAIAEAEAWPGPSLVIAYAACINHGLKAG MRCSQREAKRAVEAGYWHLWRYHPQREAEGKTPFILDSEEPEESFRDFLLGEVRYAALHK TTPDLADALFRQTEDDARARFRQYQRLAGEE >gi|289777623|gb|GG745508.1| GENE 464 537344 - 537652 377 102 aa, chain - ## HITS:1 COG:BS_yczG KEGG:ns NR:ns ## COG: BS_yczG COG0640 # Protein_GI_number: 16077456 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 2 100 3 101 104 98 49.0 3e-21 MIANHPEREQIRLENVLSALGNPLRLEIIRTLADGSELSCNALRQEEVAKSTMTHHWRVL RDSGVIWQRPQGRENMISLRREDLDARFPGLLDTLLNVMQQP >gi|289777623|gb|GG745508.1| GENE 465 537893 - 539995 2967 700 aa, chain + ## HITS:1 COG:RSc3022 KEGG:ns NR:ns ## COG: RSc3022 COG0480 # Protein_GI_number: 17547741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Ralstonia solanacearum # 1 698 1 701 703 1023 71.0 0 MPRPIPLERYRNIGISAHIDAGKTTTTERILFYTGMSHKLGEVHDGAATTDWMAQEQERG ITITSAAVSCFWPGMDRSFEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYDSVGGVQ PQSETVWRQANKYHVPRLAFVNKMDRPGADFFRVVQMMIDRLKANPVPIVIPIGAEEHFT GVVDLVKMRAILWDDATQGMTFSYGPVPDDLLATAQQWREKMVSAAAEASDELMDKYLET GELDEAEIVAGLRQRTVKGEIQAVLCGSAFKNKGVQRMLDAVVELMPSPLDIPAIQGVDE KGQPAERHPSDDEPLSALAFKLMTDPYVGQLTFIRVYSGTLKKGDAVWNPVKGKKERIGR IVLMQANDRHEVDELHAGDIAACVGLKDVTTGDTLCDPDAIITLERMEFPEPVISLAIEP KTKADQEKMGIALQRLAAEDPSFRLHTDEESGQTIISGMGELHLEIIVDRMKREFGVEAN IGRPQVTYRETLRKKVTDVEGKFVRQSGGKGQYGHVVLTLEPLEPGSGFVFEDATKGGVV PREYIPSVEKGLREAMGTGVLAGYPVVDVKATLTFGSYHDVDSSEMAFRMAAIFGFREGA RKADPVILEPVMHVEVETPEEYAGNIMGDLSSRRGMVQGMEERFGSQIIRADVPLAEMFG YSTTLRSMSQGRATYSMEFHHYAEAPRNVADEIIASRAKS >gi|289777623|gb|GG745508.1| GENE 466 540101 - 540229 80 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADIPGLRLTPYPGYKLYQQYADDKEKLAQLKALWQYAQDIV >gi|289777623|gb|GG745508.1| GENE 467 540230 - 540358 94 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAEIPGLRLTPYPGYKLYQQYANDKEKLAQLKALWQYAQDIV >gi|289777623|gb|GG745508.1| GENE 468 540359 - 541783 1967 474 aa, chain - ## HITS:1 COG:sbcB KEGG:ns NR:ns ## COG: sbcB COG2925 # Protein_GI_number: 16129952 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Escherichia coli K12 # 1 474 2 475 475 850 86.0 0 MQDSVNQPGFLFHDYETFGTSPSLDRPAQFAAIRTDAELNVIGEPEVFYCKPADDYLPQP QAVMITGITPQEALAKGDNEAAFARRIHDLFTVPQTCIVGYNNVRFDDEVTRNIFYRNFY DPYAWSWQHDNSRWDLLDVMRACYALRPEGITWPENDEGLPSFRLEHLTVANGIEHQNAH DAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSGMFGAARG NTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTSRAELGDLPAAPIKLV HLNKCPVLAQANTLRPQDADRLGISIQRCLENAQLLRANPQVREKVVAVYAEAEPFVPSE NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNYRARNFPGTLDE HEQQRWLEHRRQVFTPEFLQAYADELQMLYQQYADDKEKLAQLKALWQYAQDIV >gi|289777623|gb|GG745508.1| GENE 469 541964 - 543127 1430 387 aa, chain + ## HITS:1 COG:ECs2812 KEGG:ns NR:ns ## COG: ECs2812 COG1686 # Protein_GI_number: 15832066 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 386 3 389 390 648 80.0 0 MKGRLFIAVSLLASSVSCAFAVDFPATVAPPAIQAGSWVLMDYTTGQVLTAGNEHQQRNP ASLTKLMTGYVVDRAIDSHRITFDDIVTVGKDAWAKGNPVFDGSSLMFLKPGDRVSVRDL SRGLIVDSGNDACVALADYVAGGQPQFVALMNQYVEKLHLQDTHFETVHGLDAPGQHSSA YDLAVLSRAIIHGEPDVYHMYSQKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGF NLIASAVDGQRRLIAVVMGADSPKGREQQAAKLLHWGQQNFDTVQVLQKGQKVGTERIWY GDKEQIKLGTDQDFWLALPKAEVSRIKAKYVLDKKDLEAPIAANQRVGEISLYDGDKVVG HYPLVTLESINKGGVFSRMSDYLHHEL >gi|289777623|gb|GG745508.1| GENE 470 543304 - 543777 758 157 aa, chain + ## HITS:1 COG:ECs2811 KEGG:ns NR:ns ## COG: ECs2811 COG3449 # Protein_GI_number: 15832065 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 153 1 153 157 216 64.0 1e-56 MNYSITTLGKKTIAGFHLVGPWDQTVKQGFEQLMMWVENHQVPAREWLAVYYDNPEEVPA EKLRCATVVAVDEDYVIPANSEGVILAAVAGGDYACARARVVDYDFATPWMQFFDSLLQG TTYRVAPRPCFEIYLNDGNHDGYWDIDMYVPVERVAS >gi|289777623|gb|GG745508.1| GENE 471 543876 - 544934 1355 352 aa, chain + ## HITS:1 COG:STM2060 KEGG:ns NR:ns ## COG: STM2060 COG1289 # Protein_GI_number: 16765390 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 352 1 352 352 592 84.0 1e-169 MRADKSLKPFEIRLYRHYRVVHGVRIALAFVLTFLLVRLLNVPEGTWPLITLVVVMGPIS FWGNVVPRAFQRIGGTILGSALGLVALKLELISLPLMVLWCAAAMFLCGWLALGKKPYQA LLIGITLSVVVGAPPGDMHTALWRSGDVIFGSLLAMLFTGIWPQRAFIHWRIQMASYVTN FNRLYQAGFSPNLVDRPRLEKHLQQALNDVVKMRGLITPASKETHIQKAIFEAIQTVSRN LVCMLELQINAWWATRPGHFVMLNAHTLRETQQMTQQTLLAIAHALYEGNPQPVRANNEK LNEIVLELRQLMKEQGDDSLAETPIHGYVWLSIELARQLELLSHLICRALRK >gi|289777623|gb|GG745508.1| GENE 472 545102 - 545521 362 139 aa, chain + ## HITS:1 COG:ECs2809 KEGG:ns NR:ns ## COG: ECs2809 COG2926 # Protein_GI_number: 15832063 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 105 23 127 131 170 88.0 8e-43 METTKPSFQDVLEFVRLYRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEA IQGIIASMKSDYEDRVDDYIIKNAELSKERRDIYQKTESDGRSQSRRLIPAGPAAIDVAG LFCSTSPFVSFSAKLCPGN >gi|289777623|gb|GG745508.1| GENE 473 545738 - 546478 1107 246 aa, chain + ## HITS:1 COG:STM2017 KEGG:ns NR:ns ## COG: STM2017 COG0368 # Protein_GI_number: 16765347 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 246 1 247 247 287 74.0 2e-77 MIKSFFAALSFISRLPVPARLSQGLEIEQYQRSIVTFPLVGLLLGAIAGAVALLLQPWCG VPLAALFGVLALALLTGGFHLDGLADTCDGIFSARTRDRMLEIMRDSRLGTHGGLALIFV LVAKVLVVGELLLRDTHPIAALAAACAVGRGMAVLLMYRHRYAREKGLGNLFIGKVSLQQ TLVTMAMGVALATVLLGLQGLRAALITLVLIWGLGWALKRTLGGQTGDTLGAAIELGELL FLLALL >gi|289777623|gb|GG745508.1| GENE 474 546506 - 547573 1180 355 aa, chain + ## HITS:1 COG:ECs2786 KEGG:ns NR:ns ## COG: ECs2786 COG2038 # Protein_GI_number: 15832040 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 354 1 355 359 432 69.0 1e-121 METLSALLAAIPQPDVAGMARAQQHIDGLLKPPGSLGRLETLAVQLAGLPGLQGQLALAE KAIVVMCADHGVWHEGVTPSPQVVTAIHAGNMVRGNTGVCVLAAQAGARVQVVDVGIDAD PLPGLINLKVARGSGNIARTAAMSRQQAETVLLASMHLTRQLAADGVKVFGVGELGMANT TPAAAVISVLTGSDPDAVVGCGANLPLAQRGHKVAVVRQAIALNQPNPEEGLDVLAKVGG YDLVGMTGVILGAASCGLPVVLDGFLSYASALAACRMAPTAHPYLVPSHLSAEKGAQIAL DALGLRPYLDMDMRLGEGSGAALAMHLLEAASVMYNQMGTLAQSNIVLPNTAPSS >gi|289777623|gb|GG745508.1| GENE 475 547619 - 548707 1498 362 aa, chain - ## HITS:1 COG:MK0368 KEGG:ns NR:ns ## COG: MK0368 COG0499 # Protein_GI_number: 20093806 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylhomocysteine hydrolase # Organism: Methanopyrus kandleri AV19 # 4 357 24 390 424 202 30.0 9e-52 MKEVAWASQNMPRTLRQVAALPDLSGVRLACCMHLDMKMIPLVQGILDKGAQVFLTTCNP TTVQDDVVAWLVERGAEACAWRNMSDADWQQSWEKAIAWQPTHLCEMGADITTLLHQRGE FGNIVAGLEATGSGVNRLGDIQPGYPIFNWDDLPVKEGLHNRHMVGLTAWHTFFQTTHLT LHEKKVLVIGYGLVGQGVAAAAKAFGGQVMVAEIDPARRLQAAYDGWHVVDLQEAIASAD VVATATGGKNVVNRQALERAKAGVFILNVGHVAEEIDGEYLRQYPQEEVMPYINAYRMAD KTIYLLANGSMLNLTAGFGDSLNAFDVTLAVMASGIRHIVTDGMRAPAQVYLLPQAIWQQ AL >gi|289777623|gb|GG745508.1| GENE 476 548929 - 549660 1039 243 aa, chain + ## HITS:1 COG:AGc2783 KEGG:ns NR:ns ## COG: AGc2783 COG3448 # Protein_GI_number: 15888834 # Func_class: T Signal transduction mechanisms # Function: CBS-domain-containing membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 239 1 234 382 172 48.0 5e-43 MLSVISAGLFSRLRIFLGRLKPHALPVARRHIVLGSIGAGTGLAVTSMFSHWLLGEVNLW FIAPMGASAVLLFGVPSSPLAQPWSIVGGNVLSALIGVTVGMLVPDPALACGLAAALAIA GMYFLRCLHPPGGAVALTAILGGAGVHSEGYHFVLTPVLLNSLMLALLAIVFNNLVGRRY PHPLAAEEVKPRAVPLGISVTREDIHAALLEGQFLDIDEDDVQELLENIEQQARQRIAMA ARR >gi|289777623|gb|GG745508.1| GENE 477 549682 - 550071 610 129 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1618 NR:ns ## KEGG: Kvar_1618 # Name: not_defined # Def: 4-oxalocrotonate tautomerase # Organism: K.variicola # Pathway: not_defined # 1 129 1 129 129 253 100.0 2e-66 MPLLTFDLIEGRTEQEIRTLLDAAHRAVLRAFEVPERDRYQIVHENKAHHMVIDDTGLGL TRTRDLVVVRVYTSPRSEAQKQRFFALLQEELAEHCGLSGDDVMVSIISNQKGDWSFGRG VAQYLTGDL >gi|289777623|gb|GG745508.1| GENE 478 550187 - 551143 1196 318 aa, chain + ## HITS:1 COG:RSc2535 KEGG:ns NR:ns ## COG: RSc2535 COG0583 # Protein_GI_number: 17547254 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 307 6 310 323 251 44.0 1e-66 MSESRPESYWAHLYWLTVLEEQKSYTRAAEKLGISKSAISQKISELERVTGKTLVHRTTR SVSLSEDGLRLVAELNEPFGQLRDIFTGACDEGGPLRGTLRLTAPVAFSRQQLVPAIAPF LHQHPQLHLQLEVTDRLVSLASEGFDLAIRHCRREALPDTHVAWPLCHTATLIVASADYI RRHGRPETPDDLRHHQCLTYPRGPQRPQWTFASRQAPDERVTINVQGPFATNNSESLRDA VLAGLGVALLPDFSAREAIGRGLVQELLPAWQPVEVFADKLYVIRPYTPRVSRAVETFSR YLKATFSEPRPAPAPAPR >gi|289777623|gb|GG745508.1| GENE 479 551103 - 551843 876 246 aa, chain - ## HITS:1 COG:PA4286 KEGG:ns NR:ns ## COG: PA4286 COG0095 # Protein_GI_number: 15599482 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Pseudomonas aeruginosa # 25 223 8 206 227 104 37.0 1e-22 MSLLSLADCWPRRFTPSSLALQFCEDPTQAEQPLFAKACAGEAVAQLWQAPQGFVVPGSY RQFADLPAVSAHFAARGWPVWLRRSGGGLVPQGPGIINLSLAWPVQQSLGEAAEPIYLSL CAVLQRTLARFGVASHARAVNGSFCDGRYNLACGEGEAARKIVGTAQYWRLLTAGRGHVV LAHAVILIDADLSAAHQAANAFEAQLGSERVYCADKTVTLAQRLPGERHLLPRFSEALAR ELDAAR >gi|289777623|gb|GG745508.1| GENE 480 551890 - 553209 1697 439 aa, chain - ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 434 1 433 438 701 86.0 0 MDSTISVQPAEAPDSLLRARRAAWGSFAGAVVDWYDFLLYGITAALVFNREFFPQIGPAM GTLAAFATFGVGFLFRPLGGIIFGHFGDRLGRKRMLMMTVWMMGIATACIGLLPSFSQIG WWAPALLVFLRAVQGFAVGGEWGGAALLSVENAPQGKKAFYSSGVQVGYGVGLLLSTGLV SLISSLTTDEQFLSWGWRLPFLFSVVLVLIALWIRNGMAESQEFEAQQSQANLQPEKKRL PVVEALLRHPGAFLLIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLS CLTIPCFAWLADRFGRRRIYITGALIGTLSGFPFFMALESQSVFWILFFALMLANIAHDM VVCVQQPMFTELFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTFSGGSWHSVALYLT AGCLLSALTALLMKKQTVH >gi|289777623|gb|GG745508.1| GENE 481 553516 - 554013 449 165 aa, chain + ## HITS:1 COG:AGl2662 KEGG:ns NR:ns ## COG: AGl2662 COG3915 # Protein_GI_number: 15891441 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 165 5 168 168 206 60.0 1e-53 MRLLLAVLFCSVMLPSAYAEKLPAPTGKPVLTISGKIGNTNVGDKAVFDLAALEKLGMKT VETTTPWYTGKVRFDGIPLNKLMDLVGAKGKSARVLALNDYTTIIPIDDFYKFPVIMALK MNGEYMRVRDKGPLFIVYPYDSSTELQNQIYYSRSAWQVSKIIIE >gi|289777623|gb|GG745508.1| GENE 482 554024 - 555934 2071 636 aa, chain + ## HITS:1 COG:AGl2664_1 KEGG:ns NR:ns ## COG: AGl2664_1 COG2199 # Protein_GI_number: 15891442 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 380 1 380 382 334 45.0 3e-91 MNRILTAIILSLFIVTGYITYLVHERQSELQKFTRYTDSWSMSQMVSEYMRLESRLAGMA IGAEGADHDEVRLRLEIMMSQIELLQQGDLGKFINKSEQRKTVVATLIRNLHLLDKQVDT MTPEQVKQILPVLSELDGPLTSMAAATLTQDINIVNITHDKIQHLYYIYSVISILLIAMC ITLGLLMLRQNNNLRRAHVRMKTLANDLQASKEKLQVQNRRLQYDAYHDSLTGMPNRLSF WQRLQEIVNQVRPYQGCAVVMLFDLDSFKDVNDTLGHDAGDKLLQDLASRLSFFRKTSET LYRLGGDEFAMLSYDLTEEMALERANVIREKISQPYQIYDAQINIDACIGIVISDGESRT DYLYKCADLALYEAKKEGSGHVQIFRPGMLQRLQENKSFEDDLLQALAHDEFKVYYQPIA DTVTREIYGYEALVRWFHPVRGAVPPTVFIPVAEKIGLINTLGEWVLKTACAEAASWATP LKVSVNVSPIQLMNTSLTDTIIGVLQQTGLDPRRLDLEITESDVFNENTRSLEILSQLRE QGIQISIDDFGTGYSSLSRLSYFPFDKIKIDRSFVINIPEQKDDLDIVRLIISMGKSLHM RIVAEGVETEEQLTSLQALGCDLVQGYLIGKPSPLR >gi|289777623|gb|GG745508.1| GENE 483 556157 - 556489 366 110 aa, chain + ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 6 110 4 108 119 161 67.0 3e-40 MQRIIIPTHYVHTRSTPLWTRETAPASIWRRHLDAGTRQGVYPRLSVMQGAIRYLGYADE TSPEPVETLTIEAGQFGVFPPEKWHCIEALSEDTVFNVDFYVDPKILIEG >gi|289777623|gb|GG745508.1| GENE 484 556496 - 556831 419 111 aa, chain + ## HITS:1 COG:no KEGG:KP1_3656 NR:ns ## KEGG: KP1_3656 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 111 1 111 111 172 81.0 4e-42 MNSENKGYALAVENGQRQEKREKIYLKPMALYIPQHAVEAVNSLLDDLPAGNEEEEWVLT VTNNNNGVSVDKTFSSLAALRDPLTAADTVKDLINIVRGYESDEETNVCGW >gi|289777623|gb|GG745508.1| GENE 485 556837 - 557751 923 304 aa, chain - ## HITS:1 COG:SMa0179 KEGG:ns NR:ns ## COG: SMa0179 COG0583 # Protein_GI_number: 16262547 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 1 289 1 289 305 225 45.0 7e-59 MRTPRLPPLGALRAFHAVARHRSFKQAAGALGVSATAVSHQIKLLESVLECRVCERSAQG VSLTADGEILYAATQRAFSALEQAVVQIAHARQPPSLTVTTTSNFLTHWLVPRLADFTAR FPAIDLRLHTSVERVDLQLGTVDAAIRYRETPEPDLCCTLLYEDRFIVVASPSLGLARPE DLQRVTLFHVANRRVPADSPNWENWRRRYGPSTLNIDAGLTFSDETHALQAAVAGQGVVI ASELLARDLLQRGVLSAPFSCALPGACYYLVTTEAAAQRADIIALREWLVGQMVLGDGRH PAEE >gi|289777623|gb|GG745508.1| GENE 486 557883 - 558221 363 112 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1627 NR:ns ## KEGG: Kvar_1627 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 108 1 108 191 157 96.0 2e-37 MHVVSRYTAADAAGMIEPRGRAIALSVAFAAGVLLLNMVPVIGVTGMLSLLTALIAAFGA GWGSTRGHSWLYRSPLAATRWAFLLSAAGWLLALVAWYGGQDWPAMLPGLAS >gi|289777623|gb|GG745508.1| GENE 487 559296 - 560132 1028 278 aa, chain + ## HITS:1 COG:AGl210 KEGG:ns NR:ns ## COG: AGl210 COG0596 # Protein_GI_number: 15890215 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 278 50 326 326 441 74.0 1e-124 MAFVTTQDGVNIYFKDWGPKEAQPIVFHHGWPLSADDWDNQMLFFLAEGFRVIAIDRRGH GRSDQVSEGHDMDHYAADVSAVVEHLDLHNAVHVGHSTGGGQVARYVARYGQPQGRVAKA VLISAVPPLMVKTEQNPGGTPIEVFDGFRKALAANRAQFYLDVASGPFYGFNRDGAEVSQ GTIQNWWRQGMIGSAKAHYEGIKAFSETDQTEDLKSITLPVLVMQGDDDQVVPYKNAAIL QDKLLPNSQLIIYPGFPHGMHTSHADTINADLLAFIRA >gi|289777623|gb|GG745508.1| GENE 488 560338 - 561309 915 323 aa, chain + ## HITS:1 COG:slr1142 KEGG:ns NR:ns ## COG: slr1142 COG2203 # Protein_GI_number: 16329891 # Func_class: T Signal transduction mechanisms # Function: FOG: GAF domain # Organism: Synechocystis # 1 159 1 159 169 144 44.0 2e-34 MKLAGLHPDEQRRLQSLRSSGLLNSGKEERFDRLTRLARSLYNLPVASISLVGEDLLHIK SCAGLDVDTVPRDISFCAHTILQTDPLIVNDMQQDERFHDNPLVIAAPFIRFYAGYPVQL PDGATVGSFCLMDHQPRSFSAHEMQILSDLAAIVEDEFKVLDAATSDELTGLFNRRGFLT LAEYALLTAQRRHEPVSLAFVDLDRFKHINDTWGHEEGDRALIAIADLMKAAFRESDILA RQGGDEFIILFANTSRHDAATAMETLSHNVARFNQQAAHPWQLAFSWGCVEYDPASHPSL NALVATADRLMYQAKQKQGRERR >gi|289777623|gb|GG745508.1| GENE 489 561306 - 562406 1097 366 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1630 NR:ns ## KEGG: Kvar_1630 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 366 1 366 366 721 98.0 0 MNLRQQQQQAFDRSGEPLIVGDVSHCPLPPETLAALGPDSPYVVQVYGSGLTGEVYRLRI AGKEYNLKKRRAVAGVANLNGQLSFLNEVQRRQALQRLKDNPVTAPRFTHIVPTLYADYR LGILLSPWIDGELIHQLTPPLIAQLFTTLEACEEQGLMEWDLCRGNLLVDHQEQLWLFDF GYMYPFDPLREFNSNGLADPLFHFVERFETRFFFSWLMTQVPGAEQQLAHYRDLKRLALE SYRRKLAWLRARQAAPQVQAHFQQITARWASALADPAALSRLFAVEAFRSHVLDIEDDLH GQSCTLLTLQRIDWVIGQLEQHYRFIADEGGLFYDNEGKSQQALLSSYAQKRQQAQRYLL NASTPG >gi|289777623|gb|GG745508.1| GENE 490 563271 - 564446 0 391 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1633 NR:ns ## KEGG: Kvar_1633 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 391 68 458 458 758 99.0 0 MLSNFINGILSANKESEALVTELCRIFDIQDDSNPIVLALDLVVSPDYVKSKIPEKSLPD YDIYVDKVKGEVIRLALDHFQHEQAKCNDTILAYANLEREQIIAYEPIEMPVGKELFYVD QNVVSKYGRDENFSRQVDNFKSKMDCKFVYSPYVIEDGIKMSRVRLAEYFEAIEALTDNT MLVPTESGVMLAREDIKVTFDRVLLWRNATRAAEDLKVKRMHFNHWGYPHYSRKSRLSDR ANKNIDEFLESLRPYLDDSGCDFDFNDYESDQALCQRLSAATIEKSFSLEELIDKSIQHE SDAECMTHIEHLCDFFDLINYKTESLSELSKIRSSLQDTEHLKHAWKADYFVTDDNRLRT RGAFIYSVLGLDTKFISIKELKERVVSEFNK >gi|289777623|gb|GG745508.1| GENE 491 564805 - 566589 710 594 aa, chain + ## HITS:1 COG:mlr8165 KEGG:ns NR:ns ## COG: mlr8165 COG3593 # Protein_GI_number: 13476749 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Mesorhizobium loti # 1 591 1 603 608 184 28.0 3e-46 MRISRIRLINFANFSDVDVETGESIVIVGENKVGKSNFIRGLQLILDPGLSERDRQLGFE HFWDGLGEEKLGETIEISVDLTDFTDDARLMAHLNDCVLNPGPPMVARLTYRFQPKTELN RAPESLKDYEYVIFGGADPDMHIGGAFRRMLPIDVQGALRDAEKDLSSWRNSPLRPLIEE LSASLDDETREEIQTQVDEAQRELADHDEVAATAERISERLIAIAGKQHAVPVSLGLAPT RVDALLRSLRLLLDSGIRGIGDASLGTANLIFLALKSLELDRLVDDGERDHTFFVVEEPE AHLHPHVQRLVYRYFLGTDGENGDEGTPLTTILTTHSPHIASVTPVRSIVLLRYDAEDKK TIAVSTANAPFTPRDEDDLQRYIDVTRGEIFFSRGVILVEGDAERFLVPAFADALDIPLD MLGITVCSIGGTNFTPYVKLLGPRGLNIPHVILTDRDPMEGGVPLVRKRLINILSVLEND VDHDDMDTDEVIEYAGEYGCFVNEITLEPELFTGGLGEAMKSVIEQELSLRRATLNEIQA WVDDTDQLDKARLLKLIERIGKGRFAQALAPSVSEDVCPDYIREALEHIRDAVA >gi|289777623|gb|GG745508.1| GENE 492 568034 - 568393 203 119 aa, chain + ## HITS:1 COG:mll5898 KEGG:ns NR:ns ## COG: mll5898 COG0210 # Protein_GI_number: 13474913 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mesorhizobium loti # 1 96 63 158 169 145 78.0 2e-35 MTVALAEGGALAMLDITSLGGRDGSPEHLNLLTLHSAKGCEYDVVIMVGLDLGNLPWRNE TPEKLRESRRLFYVGLTRARDEVHMLYSGFVDGRYGPMRLGRSPFLDELEVRMRGAGLQ >gi|289777623|gb|GG745508.1| GENE 493 568525 - 568677 60 50 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1636 NR:ns ## KEGG: Kvar_1636 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 50 1 50 50 84 100.0 1e-15 MKYEPSQFEEPTQVKLCRLFDLIFLIGESLTESTFVHQITIHFRSSFSRR >gi|289777623|gb|GG745508.1| GENE 494 568755 - 569459 75 234 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1637 NR:ns ## KEGG: Kvar_1637 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 234 1 234 234 459 100.0 1e-128 MEVVDKSITEFIRKIIHELEIRGVWDRRFNWFFSREASEEKNIESYLEIIFELETMVEFN LETLLQSHEKQPSINVNHTKIKFKTSLPFYHDIIDIIPIYKDAILLEDHKPLVPQEAIPN ICHLLKIPGTKEGVEVENHNFGYHFHYCKVKKRTIERTNLLLTFDPTFKKTNKKPRPDLF GEYHAEGKNMIIDMETIGGNKRYPIYLVCHDAGQKKGLSNFKAPSNKSKLFITG >gi|289777623|gb|GG745508.1| GENE 495 570413 - 571780 -164 455 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1638 NR:ns ## KEGG: Kvar_1638 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 455 1 455 455 942 100.0 0 MTQSLENEDLDPYSKESKKTLLEHHTRILFFDRLLTILGWRLGTKGNVAEEARIKAETTR FMDYLGLKEETKAPLMIFEAKAWDKPFVSARNPETRATDDDLIAAAIRHILDDKSEDESP VTKQWHDYLKQIMGYVCTMKKEYEHNTPCAVLSSGQWTVVFANPCLTFVDGRVSTSNIKV FKLETYKSDVDALFNLLHCSVLAQEIPFPLRPTQIKEYVDINSLNSAFYGLHVHYEETGS RLFRVKPQVLIYPVLILQRHDGVLAVVANKGEHYTLEYTQNSATDVGDLTTHLDSITTCF QELHTTCEQELGRRLTVSSVEDFPGFPSASSTTNNFPLMVKNIKNYHTEWLVVTGTENHY LRNSPLIDSCRFHSWEQCHSENCAIGISAISIRSTDPKVIFTDKEIHHCAHQVVYDRRNR KCHILQIDERVCCQTCHYLNLCWSQEEQEKLPCGK >gi|289777623|gb|GG745508.1| GENE 496 571837 - 575973 888 1378 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1639 NR:ns ## KEGG: Kvar_1639 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 1378 241 1618 1618 2766 99.0 0 MSSRDGGDLSTFRNELAGKGIELAAPPRYKDDIARLQQHSQEIAASLNQYEAIESQSGQP VTLRRECQNEVEQAVQSGSLLIIGEPGAGKSGVLNALARSLRERGDDVLELAVDRYSVES LGHLTHELRLEHSLTDVLQAWDGSSQGWLIIDALDATRGGKGEAVFRPLIEQVLAWGGRW RVVASIRSFDLRMGVKLRDLFKGTPPVAKRADTLFSSVRHIVIPRWSDDEFRQLLEKSPS LATALEGASKKLRDLAKVPFNTRLLAELVSQETGVRLADISSQSELLKLYWQRRVEAHGL KAARNIKTLVDAMINARSLSVSSLLADTDADMIDTLFREGVLIREQNDRRIQFRHHLLFD YAAAQTSFDPETLIAGTLRFHKQQALGLMLSPALGFVLQEIWSYDNNHCRFWQAVSYLVN DKDGDPIIRSSAGRIAADYPTAQHDLLWLAERVAADDEKMITALSHICGALAIRFEDEKE VIALPWVYLVAALTPQVHKVAETLRFLLYPLIKRVTDKPLCNMLGTASRAVLSYALALSE PDYFVRSAILLVTDTINTDVQASCHLLEQLISSERLQRFGSEEIPVLCYNIKKIGDCAPE FVVNVFEFVYAHDVIEERETTLGKSLILPLRSNARQDYESARYSLGEYFSRFLEQYPSLA VDAAVRAISGYVARRHPLDTPVMHVPVPGHDIYLKADCSYIWAHDPDGKHAHDGEVLVKK LFQRLQSKPEPDALVLARLICEKASLAIFWARIFLAANRRNDGLIDFLWPVAAQEAFIQN EDTRKDAIDLVAMGITHRSEHERRELENSAFQYDFSDYVYPEKAKTSLLYRLFSTIGSKN LQTVQARNFLKNAPRDGEASGNKRLFNISPVTVSTDKPYDFIDGLDRNEPDNITLINAVK AAKTALGLTTNNTLSSELSLEDVFSILEPLHEQLNLAHTHTYVRTTAEDVIVRACAAAVE QKLLPPLDDDRADELTSHFLDLVHLASCATDPILNEDTEENFENSVSWGSPAPRIDAAQI ILDVIPLRPDLYERLKPDIERMLIDPHPAVRLQASVRLLRLWDVDRDSVWRYLSERLEQE TNTGVIEHTVGDGIRNLLHTEPTRSFYLIQKLLGRFNGHPERQKRIRTLVSGDLAILWGV HEVRESCHILQGWISEPTFYHDELNQVLFTLREGFVFGLAGQGKLKDTEVRHRALNMAYS IIDAAGKKLEQYSPHTDLTEAERENVTHCFAIIDRACLQLRFACEGKNNSDKTSLEYEEL KQFLNETELHMRRIGDCSSPHTVYYLLELLETLVPVDPAKCFDLMAHALSHAKKSGFQNE TLGMEQLVKMMGVFLADHKTIFEDENRRARLIESLDIFLAAGWPAARRLLYRLPELIQ >gi|289777623|gb|GG745508.1| GENE 497 576872 - 577870 259 332 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1640 NR:ns ## KEGG: Kvar_1640 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 332 318 649 649 699 100.0 0 MCYKLRMEEIDRICRTVDFSNSTPLGDNIHLISIPYWLWVRISTFCQHHDYLDTEGEWSI FNPARERIMVFTRHKDEVMNEGHHVTLLANRDPNFNSLTNHRVVLIWQPPSRYDIYNMEE DAIGPRNYWDALTTYRWLIEKLIPEADSWYCANYFPERRGWRRLPFCAPRHIPYTSDDIY SNYQPESNISVEQVDSKQSLLALLTELQDFFNIHTRRVYFKANEFEQLCDAFLYLLNKTT VNYWGYIRSSVGASQEDHESVVTALQKYRTESPVHEKNSSLYDYLLRGMMALFRDGDCHI NEMEALKVAMLVRPFADKVSEGRFLRRCQRRL >gi|289777623|gb|GG745508.1| GENE 498 579383 - 579640 305 85 aa, chain + ## HITS:1 COG:AGc1711 KEGG:ns NR:ns ## COG: AGc1711 COG2336 # Protein_GI_number: 15888279 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 85 20 103 103 57 34.0 5e-09 MYKTRLKKVGGSIMLAVPPAVLKALELSTDSEVGMTIDNGCLIIEPQKRPHYSLEELLAQ CDPHAEMSEEDREWIDAPAVGKEIL >gi|289777623|gb|GG745508.1| GENE 499 579641 - 579973 186 110 aa, chain + ## HITS:1 COG:chpB KEGG:ns NR:ns ## COG: chpB COG2337 # Protein_GI_number: 16132047 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli K12 # 2 109 8 115 116 90 45.0 7e-19 MDRGEIWLVSLDPIAGHEQSGKRPVLIVSKASFNKLTRLPVVVPVTSGGNFARTAGFTVS LEEAGTKTTGVIRCDQPRTIDMAARNGKRLERIPDAVVNEVLARLDAILS >gi|289777623|gb|GG745508.1| GENE 500 580296 - 581732 1960 478 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 470 64 533 547 699 79.0 0 MNVTSAVRQAVERTSWFKKRQRYRVLYWREISPLAVPILLENACVLLMGVLSTFLVSWLG KEAMAGVGLADSFNMVIMSFFAAIDLGTTVVVAFSLGKRDRRRARAAARQSLAIMTLFSI LLAGVIHAFGQEIIDFVAGDATAQVKALALTYLELTALSYPAAAIALIGSGALRGAGTTK IPLLINGGMNILNILISSVLIYGIFSWPGLGFVGAGLGLTIARYIGAIATIWVLMVGLNP ALRLSLKGYFKPFNFAIIWEVMGIGIPASIESVLFNGGKLLTQMFVAGMGTNVIAGNFIA FSVASLINLPGNALGSASTIITGKRLGKGQIGQAEFQAWHVFWLSTIILTLIAWGSAPFA GFIASFYTHEDDVKEVVKQLLWLNALFMPIWSLSWTLPCAFKGARDVRYTMWVSMLGMWG CRVVAGYTLGIVLGMGVIGVWLGMVLDWAVRGVLFYFRMVSGRWLWKYPRVKATSEES >gi|289777623|gb|GG745508.1| GENE 501 582411 - 582713 441 100 aa, chain - ## HITS:1 COG:YPPCP1.08c KEGG:ns NR:ns ## COG: YPPCP1.08c COG1396 # Protein_GI_number: 16082687 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 3 98 2 97 99 78 44.0 4e-15 MGRTLEQLLIDEKPDVVAEAQAIAKDILLNIHLAELREKVQKTQVEMAQNLGIKQPTVAG MEKPGRDLKLSTLKRYVEAAGGKLRLDVELPDGSHYEFVL >gi|289777623|gb|GG745508.1| GENE 502 582718 - 583047 70 109 aa, chain - ## HITS:1 COG:YPPCP1.09c KEGG:ns NR:ns ## COG: YPPCP1.09c COG4683 # Protein_GI_number: 16082688 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 108 10 115 115 116 57.0 8e-27 MFDRWFTSLNDIDRASVLAALLVLREKGPGLSRPYADTIRGSRYSNMKELRVQSRGDPIR AFFAFDPARTGIVLCAGNKVGNEKRFYHEMLAVADREFTNWLNRLKEKE >gi|289777623|gb|GG745508.1| GENE 503 583545 - 584756 203 403 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290508719|ref|ZP_06548090.1| ## NR: gi|290508719|ref|ZP_06548090.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 403 91 493 493 800 100.0 0 MKSKCFIIVLISTILLSACAWTSRGKINRNLESASYLANKNSYSSSYCDSLDYLKEALTI AQAKGSAGLQANVLQAYVDNYNKIIINLKYIHAQSSINDLWQKGESYACWMPEMRRVMPL MTAEMKTQIHPESYPSTANEQKGRDLAGEAFYQLAQKEKNKTVKLHDLLATYRYSPWRKG LNHDLQTAYDNATNHIIIKIAGDRAIAGKDVLREGVIPGLRHYYAAKSLDERKKEASDRN KVLPYPLEVSCMCHYVFDYPGAPQKTGTNFVITLRLTKAKRESGSYRRTAPEEREGVTQQ CYDVPVFSRDGKGKKMKTGETKTRCVNSTYTYTENAVYSGTEYTTTLKGKIMMSMNGRTI LKNQDIIGYESTESSSADSLEKAQNNIVRFMAYKIKMGIFSAK >gi|289777623|gb|GG745508.1| GENE 504 584845 - 586299 2064 484 aa, chain - ## HITS:1 COG:STM2009 KEGG:ns NR:ns ## COG: STM2009 COG0775 # Protein_GI_number: 16765341 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 484 1 484 484 894 88.0 0 MNHKAASLTPEQALAELEARYEASVTALRKAIGDYIDHNTLPDTEARAEGLFVYPQLSVS WDGADHKALKTRAWGRFTHAGCYTTTITNPKLFRHYLLEQLTLLYQDYGAHISVELSQHE IPYPYVIDGSTLTLDRSMSAGLTRYFPTTELSQIGDETADGLFHPTEFYPLSHFDARRVD FSLARLRHYTGTPAEHFQPYVLFTNYTRYVDEFVSWGCSQILDPDSPYIALSCAGGIWIT AETEAPEQAISDLAWKKHQMPAWHLITHDGKGITLINIGVGPANAKTICDHLAVLRPDVW LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKQVSG MPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDHMHSRKLRTFNE PPFR >gi|289777623|gb|GG745508.1| GENE 505 586430 - 586675 165 81 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1645 NR:ns ## KEGG: Kvar_1645 # Name: not_defined # Def: polymyxin B resistance protein PmrD # Organism: K.variicola # Pathway: not_defined # 1 81 1 81 81 154 100.0 1e-36 MEWWVKKVRKNSMTSSCCVVLQSGALEMIAEIEACRLHLQEGDKLTPLANARYCLNNNPA QTLKILKATHYSSERWAKLGG >gi|289777623|gb|GG745508.1| GENE 506 586946 - 588568 1922 540 aa, chain + ## HITS:1 COG:YPO4014 KEGG:ns NR:ns ## COG: YPO4014 COG2267 # Protein_GI_number: 16124137 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Yersinia pestis # 15 491 6 482 487 580 57.0 1e-165 MKHVLRHWRTSGAVIGSLLKKGIIAVLVLLVVFLAGRIYESQRGPALHRWHTWSANEMSA EEIDQATFAQYLAREKTIFADLQHEVTEALPEEDKTPVNRFYRHSRVWPGQFKQDWNRSF VLLPQGKPRGSVVLLHGLTDSPYSVRYLAQLWQQRGYVAVVPRLPGHGTAPGALTAVDWE TWLAATRLAVREATRLAGADVPLHLVGYSNGGALALKYALDSLEDNHLRQPQQIILLSPM IGVTAFARFAGLAGLPSIFPAFARAAWLNVAPEFNPFKYNSFPVKAARQSWLLSQALQQQ IIRASRQGELKALPPVLTFQSVMDSTVSTRAVVESLYRYLPDNGSELVVFDINQAADLRV LFRPALYAAVNTLLPPAPRAYTTTVVTNATAHTLQTIARTTLAQERDEHRYPLHLAWPAD MYSLSHVAVPFPLSDSLYGREPDEKNRYGISLGTISLRGETGTLSVGLETLMRVTSNPFF PWMLARVDEHITCGEQAAVTACLKAQARAEALKQEQVQNGTQQDADDRRGNDKAEQAHKP >gi|289777623|gb|GG745508.1| GENE 507 588479 - 589411 1288 310 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1647 NR:ns ## KEGG: Kvar_1647 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 310 1 310 310 516 99.0 1e-145 MDVISIIMAAGKSSVDVALYTLLPIMVIMLIIMKYLEVRGILDVIVRWVAPLLKPFGLTG MSAFALIQINFVSFAAPLATLSIMDKRGVSDRQMTATLAMVFAMGQGNVFYPLTPFGLHW LASIVISVVGGLCAAAVAWHVTGRRLSVAENPRAEALPNAEQNSQGILAVINSAGSDAIR LALGAVPMLILSLTIVGLLQGAGAIDLLQQALKPVLGWLHIPQNFVLPALVKCVAGGTAY FGVISELIQQGKVTVSQVNASAGLLIQTFDLPGIGIFLGISSRFVRLFRFVVPAAIVGIL LRTVLHLLLF >gi|289777623|gb|GG745508.1| GENE 508 589530 - 590507 1280 325 aa, chain - ## HITS:1 COG:ECs4125 KEGG:ns NR:ns ## COG: ECs4125 COG0604 # Protein_GI_number: 15833379 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 323 1 323 324 451 70.0 1e-126 MKALVLDQIDNRTVAAIKAIDLPALAEGDVRVAIDWSSLNYKDALAITGKGKIIRQFPMV PGIDFAGRVSESRDPRFVPGQDVILTGWGVGENHWGGLATEACVKGDWLVAQPAALSARQ AMIIGTAGFTAMLCVDALVNAGVTPESGDILVTGASGGVGSTAVVLLKALGYRVTAVSGR ESTHDYLRQLGADAILPRSDFAETRPLEKQLWAGAVDTVGGTMLAKVLAQTQYRGCVAAC GLAGGFDLPTTVMPFILRNVRLQGVDSVMVPTAERNAVWQRLAQLLPESYYQQAATEITL EQAPAYAADFLSNTIHGRTLVNIGQ >gi|289777623|gb|GG745508.1| GENE 509 590504 - 591208 694 234 aa, chain - ## HITS:1 COG:mlr5353 KEGG:ns NR:ns ## COG: mlr5353 COG1309 # Protein_GI_number: 13474463 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 27 216 7 197 197 105 31.0 6e-23 MNPDTSAVLKPRRGRPPKVDRQFDDTRQALIRSGLEVLTETGYLAAGIEAVIRNIDVPKG SFYHCFKSKEAFGLAVLSAYGDFFAHKLDKFLLDDAVPPLERMAAFVRHAGQGMEKYQFR RGCLVGNLLQEAPLLPDTFPGRLKAILTAWESRVARCLHEAQAAGAIARDASPDALAQVF WIGWEGAVMRARLCQSAAPLDQYWEFFAHSMTTKTPAQDGVSADNPLPTRNTLS >gi|289777623|gb|GG745508.1| GENE 510 591768 - 593402 1559 544 aa, chain + ## HITS:1 COG:XF2019 KEGG:ns NR:ns ## COG: XF2019 COG0025 # Protein_GI_number: 15838613 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Xylella fastidiosa 9a5c # 1 544 21 564 565 373 45.0 1e-103 MSLITIVLVFMMAIVVTVFVSHLLPVKVPLPLIQIAAGAALAAGGFQVDFDPHIFLLLFI PPLLFLDGWRIPKDAFFRDMKPILSLAIGLVMVTILGIGLFIHWLIPAITVAAGFALAAI LSPTDPVAVSAMTASSPLPSRMAHILEGESLLNDASGLVAFNFAIAAVLTGSFSPGDAVV KFFLMAFGGILSGLVVVWVTGKCNNFLVRRTREEPAIQILISLLIPFAAYLLAEAFHVSG ILAAVAAGIAMHYEQLSGPRLPATRMKSSAVWTMLQTTLNGMIFLMLGEQLPRMLKTLPA VASQAGVSSPWYLLLYAVAITLALGLMRFAWVWLSMTLTIFRRKRRGKAITIRPRFSIMA VMALAGVKGSVTLAGILTLPVLLADGSPFPGRELLIFLSMAVILMSLIVAAVGLPYMTQY LADDLPHDTGKDNIGAVMTEVAINRLNALLDEPVDDPNEQALRVDAGNMLLETYQRRLHY NDSDEGQDVGLELAKRARLEKYMQREVIIAQRQELFRLRRAHNISDTTFYEVLREIDLKE ESLR >gi|289777623|gb|GG745508.1| GENE 511 594119 - 595075 625 318 aa, chain + ## HITS:1 COG:slr1348 KEGG:ns NR:ns ## COG: slr1348 COG1045 # Protein_GI_number: 16330759 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Synechocystis # 138 302 5 160 249 145 46.0 1e-34 MPEAGELYLLPKRENNWHLNNVVNELRRVRQAWRDEHAKNNYRNKRSLPSRESVNSVADT LIKVLYPMRLGDVDLRKEGEDYYVGHLLGTALDRLTEEALLELYYQSDEQAENEVLLQEA VRRVQQFANRLPVIRQRLDGDILAAYQGDPSARSMDDVLLCYPGIHAVMHYRLAHELHQL DLPLLARIITEKAHSQTGIDIHPGAQIDDGFFIDHGTGVVIGETAIVGKRVRIYQAVTLG AKRFLVGEDGQLQKNYPRHPIIEDDVVIYAGATILGRITIGARSSIGGNIWLTRDVPPDS NVQQARIQQRHFSDGDGI >gi|289777623|gb|GG745508.1| GENE 512 595127 - 596044 478 305 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 3 296 3 300 308 188 38 6e-46 MIIIMNLLETIGETPLIALPSFSAELSGVTLLAKAEFMNPSGSVKDRAAKAMVLDGIARG LLTPDKTIIDATSGNTGIAYAMIGAALGYHVRLYLPQNTSPERKKIIRQYGATIVETDPL EGSDGAYLEVQAQVAAHPERYFYPDQYNNPVNPQTHFATTGKEIWEQSGKQVTHFVAGMG TSGSFVGTARRLKFEDPRVKTLAVQPASPFHGIEGTKHMGSSIKPGILDETLFDDVISVT TEEAYASARRLARRDGIFVGISSGANVAAAARLARTLPAGSVVVTLLCDVGSRYLTDPFW NETHD >gi|289777623|gb|GG745508.1| GENE 513 596037 - 596465 361 142 aa, chain + ## HITS:1 COG:aq_1691 KEGG:ns NR:ns ## COG: aq_1691 COG1310 # Protein_GI_number: 15606783 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Aquifex aeolicus # 1 130 1 128 138 91 35.0 5e-19 MIELTREIARQIGAEGEKTYPNECCGALFGHLSAQGDGRVTAIFPIVNARESEEQYHRFV ITADDALRAERAALAEGVDVIGYYHSHPDHPAIPSEFDREHALPFYAYIIVAVAQRQAGA LTSWRLTQDRLRFLQEEVHIVS >gi|289777623|gb|GG745508.1| GENE 514 596525 - 596815 297 96 aa, chain + ## HITS:1 COG:slr0821 KEGG:ns NR:ns ## COG: slr0821 COG1977 # Protein_GI_number: 16330728 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Synechocystis # 1 91 19 109 109 81 46.0 4e-16 MASTLLIPTALRAFTDGQGKVTLEGHTVGQLVAALAARYPDIQPHLYDDAGALRSFINLY VGEHNIKTTGGLETPVSDGAEVLLVPAIAGGVGKAI >gi|289777623|gb|GG745508.1| GENE 515 596812 - 597987 896 391 aa, chain + ## HITS:1 COG:all2906_1 KEGG:ns NR:ns ## COG: all2906_1 COG0476 # Protein_GI_number: 17230398 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Nostoc sp. PCC 7120 # 15 272 11 262 262 330 66.0 3e-90 MSRPSIIPDDRLSALTHAEIARYSRHLLLPEVGLEGQKRLKAARVLLIGTGGLGAPVALY LAAAGVGKLGIVDFDFVDISNLQRQIIHSTKDINRPKVASAKDKIKAINPEIQVETYNTT LSSKNALEIIREYDLVVDGTDNYPTRYLINDACVLLGKPLVYGSIFQFEGQASVFYAGQG PCYRCLYPEPPPPGLVPSCAEGGVVGVLPGIIGTIQAAEAIKLIVGGSESLIGRLLLFDV WQMKQRELRLERDPGCPVCGEHPSIHALIDYEEFCGLKPDESEAPIESVTALELHAWIEE GKPLQLIDIREPHERAIAKFPQAKVMPLGQIVRRIDEFDPTIDAVFLCKIGQRSIFAIRA LQRAGYQGRVMNLKDGLNAWARDVDTRLPQY >gi|289777623|gb|GG745508.1| GENE 516 598025 - 598969 977 314 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1656 NR:ns ## KEGG: Kvar_1656 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 314 1 314 314 601 100.0 1e-170 MAEQKSINALGREAAYQLANVTKTAPQFAAITPRWVSRFLDYKGLESGIYRVNKVVEGET PLDVLCSQDPSRVEIPQGYIEYQTTPREYQLDSISTIINVDTKIADLYSSPYDQASEQIA LAIESLRERQESQLINNDEYGLLKNIDDSQRIQTRNGRPTPDDLDELLSKVWKEPSFFLA HPRAIAAFQREATRRGVPPVTVNLHGGTFILWRGIPLIPSDKLFVDGLKNPKSQGGKTNI LLIRSGESKRGVLGLYQEGLPNEQSRGLSVRFRGIDDNGVASYLLSLYCSAAILADDAIA VLEDVEVGEYYDYE >gi|289777623|gb|GG745508.1| GENE 517 598956 - 600446 1241 496 aa, chain + ## HITS:1 COG:ML0842 KEGG:ns NR:ns ## COG: ML0842 COG0520 # Protein_GI_number: 15827373 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Mycobacterium leprae # 96 493 7 404 411 510 62.0 1e-144 MTTSNLFTLPFAPGGWPGEADDVPSARDYGLPDARDLQGLLSDTPARPRGVETAYAPRVV PLGQEGRADITPRGFATLPAFGSRPAPAARVGQIPVERIRADFPILAEQVEGHPLVWLDN AATTQRPKQVIDRISHYYLHENSNVHRAAHTLAARSTDAYEAAREKVSRFIGARGPENII FVRGTTEGLNLIAHSYVKPLLRPGDEIILTQLEHHANIVPWQLIAQETGATIRVAPVDEH GQLIVEEYIRLFNDKTRFVSATHVSNALGTVTPVQELVQIAHRFGVRIAIDGAQSISHIP TNVTALDADFFVFSGHKIFGPTGIGVVYGKQEVLEAARPYQGGGNMIADVTFELTRYQPS PNKFEAGTGNIADAVGLGAAIDYVTSLGIENIAQYEHALLEYGIAKLSAIPGLTLVGTAA NKTSVLSFVLAGHENEAVGRYLSQVGIAVRSGHHCAQPILRRLGYESTVRPSLAFYNTPQ EIDFLAEQVARFAARQ >gi|289777623|gb|GG745508.1| GENE 518 600926 - 601843 1161 305 aa, chain + ## HITS:1 COG:ECs2784 KEGG:ns NR:ns ## COG: ECs2784 COG0583 # Protein_GI_number: 15832038 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 436 80.0 1e-122 MNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGEMDQQLLIRTKRGVTPTEA GKILYTHARTILRQCEQAQLAVNNVGQTLRGQVSIGLAPGTAASAITMPLLQTVRNELPE VMVYLQESSGTALNDKLLAGQLDMAVLYERSPVAGIVSQPLLKEDLYLVGTRDCPGQSVD LTAVAEMNLFLPRDYSAVRARVTEAFTLRRLSAKIIGEIESITTLTAAIASGMGATVLPE SAARSLCGAANGWMARISTPSMSLSLSLNMSARGSLSPQAQAVKEILLSLVSRPSLENRE LQLVS >gi|289777623|gb|GG745508.1| GENE 519 601950 - 602900 1341 316 aa, chain + ## HITS:1 COG:ECs2783 KEGG:ns NR:ns ## COG: ECs2783 COG0583 # Protein_GI_number: 15832037 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 547 85.0 1e-156 MNFQQLKIIREAARQDYNLTEVANMLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT EPGKALLSIAERILNEASNVRRLADLFTNDASGVLTIATTHTQARYSLPPVIKAFRELFS DVRVELVQGTPQEIEALLHNGGADIGIASERLSNDPTLAAFPWFRWHHSLLVPKDHPLTQ VSPLTLEAIARWPLITYRQGITGRSRIDEAFNRKGLMPDIVLSAQDSDVIKTYVELGLGV GLVAEQSGDAREADTFTRLDTRHLFDANTVWLGLKRGQLQRNYVWRFIELCNAGLSLDEI KRQAMEPEEAAIDYQI >gi|289777623|gb|GG745508.1| GENE 520 602984 - 603919 1166 311 aa, chain + ## HITS:1 COG:erfK KEGG:ns NR:ns ## COG: erfK COG1376 # Protein_GI_number: 16129931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 308 1 308 310 495 80.0 1e-140 MRRVKLLCSALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPENNTQPLESFAAQYGQG LSNMLEANPGVDVYLPHSGSTLIIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVL PIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAKEGKTLPALVPPGPDNPMGLY AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYTVE PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPV NISAAAVQGSL >gi|289777623|gb|GG745508.1| GENE 521 604118 - 604354 187 78 aa, chain - ## HITS:1 COG:no KEGG:KPK_1816 NR:ns ## KEGG: KPK_1816 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 78 1 78 78 123 100.0 3e-27 MKKGIKIIITVVFVILALLSGMMSFMIVGMGVSGSGCGQECFDNMDSAKLISIIFWILAI ISGIFAFMDNGSQKKDPQ >gi|289777623|gb|GG745508.1| GENE 522 604663 - 605583 550 306 aa, chain - ## HITS:1 COG:PA4174 KEGG:ns NR:ns ## COG: PA4174 COG0583 # Protein_GI_number: 15599369 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 301 1 301 307 427 69.0 1e-119 MDRFDAMRAFARVVEAGSFTKAAQTLHMSKTTVTQLIQQLEARLRVKLLHRTTRKLGVTP DGAVYYERVIRLLADMEDAENSLSSAAMTPRGRLRVDVPSPLARLILVPALPAFHARYPD IQFDMGVSDRVVDLIGDNVDCVLRGGEITDQSLIARHVGDLQIGVYVAPHYVERLGAPAH PRELQNTDHRIVGFVSSRSRKIDPLVLRSESEQIEITGNYVLAVDDGNAYLEAGLAGLGV IALPIYMAAAHQAVGALIPLFTQWRISPMPLHLAFPPNRHVNGKLRVFIDWIVELMQRHV PITNNK >gi|289777623|gb|GG745508.1| GENE 523 605726 - 606115 172 129 aa, chain + ## HITS:1 COG:PA4173 KEGG:ns NR:ns ## COG: PA4173 COG0251 # Protein_GI_number: 15599368 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 129 1 129 132 205 72.0 2e-53 MTAREAVFPFGRQTLYERNRYSPAIKFNGFLFVSGQVGSREDGSPEHDLQAQVRLAFNNL NAVLAAAGCTFGDVVDVTLFVVDPESNLDAIWSILPEYWGEAPYPTLTGIGVTWLYGFTF EIKVIAKLP >gi|289777623|gb|GG745508.1| GENE 524 606773 - 607201 190 142 aa, chain + ## HITS:1 COG:AGl35 KEGG:ns NR:ns ## COG: AGl35 COG0604 # Protein_GI_number: 15890120 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 142 181 319 319 190 71.0 7e-49 MLELGADHVVDRAEHNIVDRVRQYTQGTGVDLVIDPVGTTLPASLSALAPEGRLVFVGNA GGGSLTVDLWSPMQSNQTLMGVFMGPLFARPGVRASVDDLLQAVAAGRIKVVIDRIFPLA NAAAAHEFAETAKPLGRVVMKP >gi|289777623|gb|GG745508.1| GENE 525 607599 - 608495 832 298 aa, chain + ## HITS:1 COG:AGl2813 KEGG:ns NR:ns ## COG: AGl2813 COG0834 # Protein_GI_number: 15891518 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 293 86 348 355 105 29.0 7e-23 MTLSKLLLPLLIAGNLSSAWAAGQVVPSSTTFHVTADEALKSKLPPDIAKRGYIVAGTNP NTPPTTFFQEDNKTLAGREIDVMNAVAARLGVEVRWQDTGGFDNIIPGLKSGRYDVALSN INATKKRLEQVDFVSYYDASRLGVISRKDANIAPFTSFEAVCGQEVGAGAGTTQIGRLEA ASKICTDAGKPPIKIAVFPDRPSGVQAVVSGRVPMFFGPYEGLTYQVSQVKPLTLTGTIH VDDAPVSVAFPKQSGLEEAVQASLNSLIKDGTYQKILDKWSIGFGAVKESKRNEEIFG >gi|289777623|gb|GG745508.1| GENE 526 608492 - 609430 768 312 aa, chain + ## HITS:1 COG:SMa2197 KEGG:ns NR:ns ## COG: SMa2197 COG0765 # Protein_GI_number: 16263639 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Sinorhizobium meliloti # 26 284 31 289 304 227 45.0 2e-59 MSSETHDQQPEELRIIGKKYIGRWISALIVLLILLAMGNSMLSNPRFEWSVIAENFTGPS IIQGVLMTLQLTAISVIFGFAGGTILALMRLSSNPVLVAVSWGYTWFFRGVPMLVQLFLW YNIAALYPTISISLPWVGEIWSASANSLISPFSAAVIALVMHQSAYAAEIIRAGIQSVGT GQVEAARALGYRPAQIFLHTILPQAMRAILPPAGNEVIGQLKTTAVVSVISLQDVLFSAQ IIYQRTYEVIPLLLVATLWYLLLTSLLSVIQYYVERHFSRSSHRKVKRKAGKASASGAVS TPSISAGETSHG >gi|289777623|gb|GG745508.1| GENE 527 609423 - 610184 274 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 227 1 219 223 110 33 3e-22 MGEAIEFRKVTKRFSGNTILDEISLDIPAGSVTVILGPSGSGKSTLLRCINHLEKLDGGT IRIGGELVGYQQKGQALYELSSRRIAAQRSRTGMVFQQFNLFPHRTVLQNITDAPLRVKK QNREQVLSKARALLRQVGLASREDDWPQQLSGGQQQRVAIARALAMDPEVMLFDEPTSAL DPELVGEVLQVIKKLAHSGITMVIVTHEIGFAREVADNVIFMEGGKIVASGPTKSVLDET ENVRVRNFLSTVL >gi|289777623|gb|GG745508.1| GENE 528 610179 - 611522 633 447 aa, chain - ## HITS:1 COG:BS_yxeQ KEGG:ns NR:ns ## COG: BS_yxeQ COG2079 # Protein_GI_number: 16080997 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Bacillus subtilis # 3 386 6 395 445 261 41.0 2e-69 MTLTPSLAKLIVSSSPSPAAHEAAREGLLDFLAVTLPVLRGDFPDAGLNSLHQVYRADDP PTRALLLGYVGHALDFDDFHPDFRGHPSVVILPALLALVSQRPDINGAHFLDAYVTGVEM SGRLGLAVGSQHYTLGFHNTATLGTIAAAAACARLVHATERQTAVILGIAATQSAGLRAQ FGSDVKPLHAGLAAQTAVIATQLTLAGFHGQPDNVLDSFLSTYCAGQQQPEKLISGWGAP WRIISPGLEFKPYPTCGGTHSAADAARALRQEWLQAGNSTDVLIAAIERIEVSFPPGGDI AASVRKPNTGVEARFSLEYVIAACLLRGELRLEDFSSAPVATDIAALAESVARCPDFSAP PDELNPAARFHQVTVFLRDGSVLQQRFTRQQSLAIPFDLPAKLRACLPDFTDAKRMELVA LSRLENRDSLPRLVDMLFAKQINAASL >gi|289777623|gb|GG745508.1| GENE 529 611690 - 612874 983 394 aa, chain - ## HITS:1 COG:BS_yxeP KEGG:ns NR:ns ## COG: BS_yxeP COG1473 # Protein_GI_number: 16080998 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Bacillus subtilis # 17 383 12 379 380 345 47.0 7e-95 MLDITQEHQPLAAFIQDFRHHLHRHPELSNDEFNTTASIRAVLEKYQIRVIDLPLKTGLV AEIGGINPGELVVLRSDIDALPIEEKSAVDYTSQNPGVMHACGHDFHTSAALGAAILLKA QEDSLSGTVRILFQAAEETGHGAPALISTGALDNAAVIFGIHNDPSLPVGVIGSKDGALT AGVDRFAIAISGTGSHAARPHEGNDPIIIAGQVISALQTLIARNVPSAHNAVVSITQVHS GSTWNVIPDSAWLEGTVRTFNQDTRELIERRLRQVLTGIAAAFDTDISLDWQPGPPSVVN TAKWVDFALAHGEGSGFEARRVEASPIGEDFAFYQQKLPGAFIMIGSGGPYALHHPQFRV DDRALFPTAHYLSQLAVQALRTLSAEINSKDKSA >gi|289777623|gb|GG745508.1| GENE 530 612875 - 613411 518 178 aa, chain - ## HITS:1 COG:BS_yxeL KEGG:ns NR:ns ## COG: BS_yxeL COG0454 # Protein_GI_number: 16081002 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 1 161 1 161 165 153 48.0 2e-37 MTQHFRRLTLDDKHDYLTLMLAAYAPIKALGIQFDAATADLVRVTQHLDDHAVFALFDDQ RMAASVTLRFPWGAMPGPLGLPHIGWFGTHPDYAGQSLGKKLLGWLEDNILIRELKAPAY SLGTATSHPWLRDMYLKLGFQPVFERDLGKGHITLYLKKILDEKSHARWLERQPPTGV >gi|289777623|gb|GG745508.1| GENE 531 613408 - 614790 1202 460 aa, chain - ## HITS:1 COG:PA3517 KEGG:ns NR:ns ## COG: PA3517 COG0015 # Protein_GI_number: 15598713 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Pseudomonas aeruginosa # 1 442 1 444 477 343 41.0 6e-94 MSSHPIDFLLLGNNFGTPEMREIWSEQNRLTQQINVEVALALAEGELGVIPQQAALSIAE LANASQLNIKDIAASGAQMKHSLMPVLTALQQQCGDAGEYIHYGATTQDIIDTATVLQLA QTLKVIVRDSTAVANELKALAREHQYTLMTGRTHGMQALPTTFGFKVAVWLDEFIRHLDR LAAITPRLLTGNISGAISTYAALGEVGPEVERRTLARLNLSTPNIGWQAARDRFSEYASV AVLISGTLGKIGNELYNLMRTEINEVEEPFSSGKIGSTTMPHKRNPAALEGLASLTQPLL HSASLIYQSMHVEHERDAMSWRAEWIALPEISIYLSAQLQNAQSILSGLTVNKARMLANL QMQDGLLLSEKVMFEVGKKLGKQTAHHLVYECAMQAFEKRHAFKTVLLAHPVLAACITER DLDHWLDPAHYTGCAAQKVDDVIRFAEQSGHLTSTEGSGL >gi|289777623|gb|GG745508.1| GENE 532 615156 - 616241 982 361 aa, chain + ## HITS:1 COG:YPO1556 KEGG:ns NR:ns ## COG: YPO1556 COG0371 # Protein_GI_number: 16121827 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Yersinia pestis # 7 354 12 358 363 147 34.0 3e-35 MFAIKSPQTYHHQPGLLSRTGELLAVHSSDVAIITSPKAWRAVNPQLETSLEAAGIRWQV NFLTTECTDAAIETHLNSVREQNATLVLGIGGGRVLDCAKAVANLLSHVGLVTIPTVAAT CAAWSPVSIIYNELGGHVRSQPLSRMPLMLLVDTNVIAQNDVRYLKAGIVDALAKWYEFR PYKQKSDDSLALNLKVQAAKLAVDVFEQYGAQAVQDNARHEVTPALMKVIDANIAVAGMA NSMRDETPAPGVAHAIHNRFTHQPELHDWLHGEKVGFGLLVQSLLESDDGQPEVQLLSLL REYDAPLSLPPLNGDREAIIAAIAREVKFSAENAARLPFSIAAENIEKALRKTETHYYSQ G >gi|289777623|gb|GG745508.1| GENE 533 616246 - 617577 1112 443 aa, chain + ## HITS:1 COG:AGl2922 KEGG:ns NR:ns ## COG: AGl2922 COG2141 # Protein_GI_number: 15891571 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 437 2 432 436 436 50.0 1e-122 MTSDSSSAKNTRQLRLGLFVQPLGHHVSGWRLTENLGSPTDIDWLTGIAKKAEEGKFDMF FVGDALATSVYRLPSTMARLEPLTLLSALAVQTRHIGLAATASTTFSDPFNLARSFSSLD HISHGRAAWNVVTSFSTDVARNFSRDDMPTHAERYAVAHEFLEATFKLWEGWQEGAVQPD KASGQYFVNEKIQPVNHQGKYFQVQGPLNITRSPQGRPVIIEAGSSADGQKLAAATAEVV FTAAATLEEAQTFYRAQKQQVIEAGRNPDHVLILPGVMPIVGRTLEEAHETWRELNSLVD IDNGIRQLSTRFNMDLSAFPLDGPVPDVPAGEGNQSRVKLLTDLAYRENLTLRELAAIAA GSRGHRVLVGTADVIADDFQHWLEEGGADGFNIMPAVMPEQLSLFVELVIPELRRRGLFR EEYEFSTLRENLGLPEPDFNRQS >gi|289777623|gb|GG745508.1| GENE 534 617599 - 618810 721 403 aa, chain + ## HITS:1 COG:SMc04386 KEGG:ns NR:ns ## COG: SMc04386 COG0436 # Protein_GI_number: 15967044 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Sinorhizobium meliloti # 6 400 15 410 410 393 49.0 1e-109 MTISLSDRLQRVSLSANAAAKQRTNDLKKAGVDILDLTTGEPDFDTPAHIKQAAYEAIAG GETKYTPTPGIPALREAVRQKLQRENRLPFAVADIMIANGAKQVIFNAFAATLNDGDEVI VPVPYWPTFPDSVRFNGGTPVLVECHLEQGYKLTPEQLAASITPRTRWLVLNHPGNPSGA VYSAAELQALAAVLRGHPQVLVMLDDLYEHILFDGCEHQNLLNVAADLQGRSLLVGGVSK TYAMTGWRIGFGAGPQALIAAMTVVQSQISSGASSVSQAAALAAFNGGLDFIAPQVAAYQ QRRDVITDILANIDGLELRVPQGGFFVFCRCAGLIGRYRPDGAKIENEADVLDYLLESGV SGVGGSAYGLSSYFRLSIATDSATVAEAGRRIASACAKLSPAE >gi|289777623|gb|GG745508.1| GENE 535 619223 - 620020 767 265 aa, chain - ## HITS:1 COG:ECs2774 KEGG:ns NR:ns ## COG: ECs2774 COG3228 # Protein_GI_number: 15832028 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 14 278 278 428 78.0 1e-120 MFKWPWKADDESGNAEMPWEQALAIPVLAHLSPTEQRKLTQLAARFLQQKRLVALQGLEL TPLHQARIALLFCLPVLELGIEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRVVQSGQ SWQQGPVVLNWLDIQDSFDASGFNLVVHEVAHKLDARNGDRASGVPLIPLREVAGWEHDL HAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCH FYQQDPLQRIRENGLQDEDNRRIVH >gi|289777623|gb|GG745508.1| GENE 536 620478 - 621623 1762 381 aa, chain - ## HITS:1 COG:STM1473 KEGG:ns NR:ns ## COG: STM1473 COG3203 # Protein_GI_number: 16764819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 381 1 377 377 477 74.0 1e-134 MKRKVLALMVPALLMANAVNAAEIYNNNGNKLDLYGKVDGLHYFSDDTSEDGDQTYARFG IKGETQIASELTGYGQWEYNIQANTTEKEGANSWTRLAFAGLKFADYGSLDYGRNYGVVY DIESWTDMLPEFGGDTYTQTDVYMTGRTNGVATYRNSDFFGLVDGLHFALQYQGNNENAG SGEGTNNGGKRKLARENGDGFGISSYYDLDMGISVGAAYSSSDRTHNQLAEARSSQRYAN GDKADAWTVGAKYDANNIYLAAMYAETRNMTFYGNDSFGGIANKTQNFEVVAQYQFDDFN LPLRPSVAYLQSKGKDLYTYSRYGDKDLVKYVDVGMTYYFNKNMSTYVDYKINLLDEDDR FYKNSGIATDDIVALGLVYQF >gi|289777623|gb|GG745508.1| GENE 537 622162 - 622443 280 93 aa, chain + ## HITS:1 COG:no KEGG:KP1_3562 NR:ns ## KEGG: KP1_3562 # Name: yedR # Def: putative outer membrane protein N precursor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 93 13 105 105 164 95.0 7e-40 MEEQAKRSPGGKLALWALYAFCGYCVWVIVRYWWVVGKIHSVPGASVEGDLGTTAGKWLG ALLGMLVLAGIGAILGAVVWYTRPSRGERDHQR >gi|289777623|gb|GG745508.1| GENE 538 622486 - 623193 700 235 aa, chain + ## HITS:1 COG:yedJ KEGG:ns NR:ns ## COG: yedJ COG1418 # Protein_GI_number: 16129908 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Escherichia coli K12 # 1 228 1 228 231 292 67.0 5e-79 MNLVDWQQRYEHWILTHHAQDDAAHDLSHFRRVWATATQLAAGEEVDRLVLLTACYFHDI VSLPKNHPERSRSSMMAAEKTLAILQSSFADFPVERYAAVSHAIEAHSFSAAIPPRTLEA KIVQDADRLESLGAIGLARVFAVAGALNTILFDAEDPFADRRALDDRRYALDHFQCKLLR LPETMQTTRGKEMAQHNARFLVEFMAKLSAELQGEPLALDEAVLRRFAPQASTDR >gi|289777623|gb|GG745508.1| GENE 539 623270 - 624670 1291 466 aa, chain + ## HITS:1 COG:STM1992 KEGG:ns NR:ns ## COG: STM1992 COG0270 # Protein_GI_number: 16765328 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 3 466 14 476 476 732 78.0 0 MPLAEQAGEEAQALLRQLMTIYDVKTLVAELVSVGEQHWSAAILKRVAALSRAAGRLRPQ EIAHLATLLPAPPAHHPHYAFRFVDLFAGIGGIRNGFEAIGGQCVFTSEWNKHAVRTYKA NWYCDPQQHRFNEDIRDVTLSHRPDVSDEEAAQHIRETIPQHDVLLAGFPCQPFSLAGVS KKNAMGRAHGFACETQGTLFFDVVRIIAARQPAIFVLENVKNLKSHDQGRTFRIIMQTLD ELGYEVADAGHTGPDDPKVIDGRHFLPQHRERIVLVGFRRDLQLHEGFTLRDIAALYPAV RPTFGELLEPTADAKFILTPVLWKYLYRYARKHQARGNGFGYGLVDPGNPHSVARTLSAR YYKDGAEILVDRGWDRPLGEQHFDDPQNQQRRPRRLTPRECARLMGFESPQGSRFRIPVS DTQAYRQFGNSVVVPVFAAVAKLLAPRIAQAVARREADDNDGGCSR >gi|289777623|gb|GG745508.1| GENE 540 624651 - 625145 443 164 aa, chain + ## HITS:1 COG:vsr KEGG:ns NR:ns ## COG: vsr COG3727 # Protein_GI_number: 16129906 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Escherichia coli K12 # 1 156 1 156 156 253 78.0 8e-68 MADVHDKATRSKNMRAIATRDTAIEKRIAALLTGAGFTFVAQDRALPGRPDFALPDYRCV IFTHGCFWHHHDCYLFKVPATRTAFWLDKIAGNVARDARDRQQLAEQGWRVLIIWECALR GRLKLNDEALTERLEEWICGAGHDAQIDTQGIRELAFTSPPCKE >gi|289777623|gb|GG745508.1| GENE 541 625120 - 626031 1096 303 aa, chain - ## HITS:1 COG:STM1990 KEGG:ns NR:ns ## COG: STM1990 COG0697 # Protein_GI_number: 16765326 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 300 1 300 306 379 77.0 1e-105 MSTRQLLPLIGALFALYIIWGSTYFAIAVGVASWPPLMMAGIRFLSAGVLLLGWLLATGH KLPARRPLLNAALIGVLLLAVGNGFVTLAEHQHVPSGIAAVMVATVPLFTLCFSRFFGIA TRKLEWLGIAIGLAGIVMLNSGGNLNGNPWGALLILIGSLSWAFGSVYGSRIELPTGMMA GAIEMLAAGIVLLVSSWLTGETLTHVPSWSGIAALAYLAIFGSLIAINAYMFLIRNVTPA VATSYAYVNPVVAVLLGTGFGGESLSLIEWLALAVIIFAVVLVTLGKYLFPARSEATPCK AAK >gi|289777623|gb|GG745508.1| GENE 542 626214 - 627125 1133 303 aa, chain + ## HITS:1 COG:STM1989 KEGG:ns NR:ns ## COG: STM1989 COG2354 # Protein_GI_number: 16765325 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 299 1 299 303 442 84.0 1e-124 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWG VAKGSFINKVILVPLALLISAFIPWAITPLLMLGGAFLCFEGVEKVLHSLEARKHKEDPA QRQQRLQALAERDPLAFERDKVKGAIRTDFILSAEIVAITLGIVAEAPLLNQILILSGIA ILVTIGVYGLVGVIVKLDDMGYWLAEKRAALAQWLGKGLLVVAPWLMKVLSIVGTLAMFL VGGGIVVHGIAPLHHAIEHWSAGLGGILASLLPVIANLVLGFIIGAVVLAGVKVVSSLRR SVK >gi|289777623|gb|GG745508.1| GENE 543 627241 - 628920 1753 559 aa, chain + ## HITS:1 COG:yedQ_2 KEGG:ns NR:ns ## COG: yedQ_2 COG2199 # Protein_GI_number: 16129902 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 381 553 1 173 179 232 64.0 1e-60 MDKPLRLKINKLRHLTSPAHVVNVCFIVVLFFSTLLIWREINVLEEAYVANQRNNLANVA HEMDGLLQFNIDRMMFFRHGMQSALEQPLDIDVLRSASQRYLSQRHQEAWRVALPNRRTL PVFGVSGSVVGNNPMLLKDDPLAADELMATLELGYLLNLTQHDRDFAERMQYISRSGFFT STLPLRDESQVMTHYSQAISALWFTRQSQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHLNLLASSAPGNVLTLLSPR EQELLSRAFVHDNQGGLRLLTRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLM WVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTRLLNRGALFEQAMAVASACQR SGRPLSVIQLDLDHFKRINDRYGHQAGDRVLSTVASTLASTVREGDLLGRVGGEEFCVVL PNTTLQDAVAVAERLRLRIQGREVFLHNNVTLRVSASLGVSTSEEQGEYQFEALQSVADR RLYLAKQNGRNQVCFRSEA >gi|289777623|gb|GG745508.1| GENE 544 629220 - 629441 237 73 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1684 NR:ns ## KEGG: Kvar_1684 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 73 2 74 74 125 100.0 4e-28 MKNRLTGQAGNDVDVNVDALLAAINEISESEIHRTLDDPQRASIDGRGSHTWRELAEAFE LDIHDFSASEVNR >gi|289777623|gb|GG745508.1| GENE 545 629575 - 629766 282 63 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1685 NR:ns ## KEGG: Kvar_1685 # Name: not_defined # Def: dextransucrase DSRB # Organism: K.variicola # Pathway: not_defined # 1 63 1 63 63 127 100.0 2e-28 MQVNDRVTVKTDGGPRRSGVVLAIESFSEGTMYLVSLEDYPLGIWFFNEIGHPDGIFVEK EAS >gi|289777623|gb|GG745508.1| GENE 546 629799 - 630422 377 207 aa, chain - ## HITS:1 COG:ECs2690 KEGG:ns NR:ns ## COG: ECs2690 COG2771 # Protein_GI_number: 15831944 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 268 67.0 6e-72 MSTMIMDLCSYTRLGLTGYLTSRGIKKQEIVEVHCATDLQKHCASCCPAVVFLNEDCFVH DDESNGIIRQIITQNPATLFVIFMSLANIHFDRYLRVRKNLLISSKSITPKDLDVILVNY LKYKNSSLGQLNLPTLSLSKTESNMLQMWMAGHGTSQISTQMNIKAKTVSSHKGNIKKKI QTHNKQVIYHIVRLTENVTSGIQVNLR >gi|289777623|gb|GG745508.1| GENE 547 630821 - 631228 463 135 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1687 NR:ns ## KEGG: Kvar_1687 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 135 9 143 143 266 99.0 1e-70 MVVALAGCVQVDHYDDVVKAPAPAGLEGYWQSKGPQSEMMSPDAIASLIVTKEGDTFDCR QWQRVIAQPGKLMNRDNQIYNVTASLDIYPIEREGNTLSYDRMTLTRVERLTPECEKAWA KARTTGAVSARASVR >gi|289777623|gb|GG745508.1| GENE 548 631275 - 632762 1742 495 aa, chain - ## HITS:1 COG:ECs2666 KEGG:ns NR:ns ## COG: ECs2666 COG0366 # Protein_GI_number: 15831920 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 495 1 495 495 901 85.0 0 MKNPTLLQCFHWYYPAGGELWREVEALAPSLNEIGINMVWLPPAYKGASGGYSVGYDTYD LFDLGEFDQKGSVATKYGDKAQLLAAMKALKEHDIAVLLDVVVNHKMGADEKETLQVQRV DEHDRTQIAEEIIECEAWTRYTFPVRAGQYSQFVWDYKCFSGIDHIENPTEDGVFKIVND YTGEGWNEQVDDELGNFDYLMGANIDFRNHAVTEEIKYWARWVMEQTGCDGFRLDAVKHI PAWFYKAWIEHVQEVAPQPLFIVAEYWSHEVEKLQQYIDLVEGKTMLFDAPLQMKFHEAS RQGRDYDMSQIFSGTLVEADPFHAVTLVTNHDTQPLQALEAPVEPWFKPLAYALILLREN GVPSVFYADLFGASYEDTGGDGQTYAIEMPVIEQLHELIDARQRFAHGVQTLWFDHPNCI AFSRSGTDEDPGCVVVMSNGDEGEKTLTLGENYGNKRWRDFLGNREEIVETDAEGSAIFT CNGGSVSVWVMEAVL >gi|289777623|gb|GG745508.1| GENE 549 632963 - 633763 1137 266 aa, chain + ## HITS:1 COG:ECs2659 KEGG:ns NR:ns ## COG: ECs2659 COG0834 # Protein_GI_number: 15831913 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 448 90.0 1e-126 MKLALLGRQALMGAMAVVLMAGVSVKTFAAENLLNQVKERGTLRVGLEGTYPPFSFQGDD GKLTGFEVEFANELAKHLGVKADLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF STPYTISGVQALVKKGNEGAIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDP TKYQDLRVGRIDAILVDRLAALDLVKKTNNTLAVTGEAFSRQEAGVALRKGNDDLLKAID AAIADMQKDGTLKALSEKWFGADVTK >gi|289777623|gb|GG745508.1| GENE 550 633859 - 634845 1403 328 aa, chain + ## HITS:1 COG:yedO KEGG:ns NR:ns ## COG: yedO COG2515 # Protein_GI_number: 16129866 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Escherichia coli K12 # 1 328 33 360 360 584 89.0 1e-166 MSLQNLTRFPRLELIGAPTPLEYLPRLSDHLGREIFIKRDDTTPLAMGGNKLRKLEFLAA DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTGAENYLSNGNRLLLD LFNTQVEMCDALTNPAEQLDELATRIEAQGYRPYVIPVGGSNALGALGYVESALEIAQQC EGAVEISSVVVASGSAGTHAGLAVGLEQLMPQAELIGVTVSRSVADQLPKVVALQQAVAN SLELQAKADIMLWDDYFAPGYGTPNEEGMAAVKLLAQLEGILLDPVYTGKAMAGLIDGIT QKRFKDEGPILFVHTGGAPALFAYHPHL >gi|289777623|gb|GG745508.1| GENE 551 634861 - 635529 932 222 aa, chain + ## HITS:1 COG:yecS KEGG:ns NR:ns ## COG: yecS COG0765 # Protein_GI_number: 16129865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 222 1 222 222 376 93.0 1e-104 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPLWPVKWLARMYIS IFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWE AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS RTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERDPK >gi|289777623|gb|GG745508.1| GENE 552 635526 - 636278 257 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 18 241 27 256 563 103 31 3e-20 MSAIEVKSLVKKFHGQTVLHGIDLEVQKGEVVAIIGPSGSGKTTLLRSINLLEQPESGTI RVGDVTIDAGRSLGPQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEDKQE SIVRARDLLAKVGLSGKENSYPRRLSGGQQQRVAIARALAMRPDVILFDEPTSALDPELV GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGEAKALFASPQQPRT RQFLEKFLMQ >gi|289777623|gb|GG745508.1| GENE 553 636633 - 637319 576 228 aa, chain + ## HITS:1 COG:STM1950 KEGG:ns NR:ns ## COG: STM1950 COG2771 # Protein_GI_number: 16765288 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 228 13 240 240 324 67.0 8e-89 MLHQFQSVAAGEEVYNLLQRETEALEYDYYTLCVRHPVPFTRPRVTFQSTYPRAWMSHYQ AENYFAIDPVLRPENFMRGHLPWEDGLFRDAAALWDGARDHGLKKGVTQCLTLPNHAQGF LSVSANNRLPGSYPDDELEMRLRMLTELSLLALLRLEDEMVMPPEMKFSRRELEILKWTA EGKTSAEVAMILSISENTVNFHQKNMQRKFNAPNKTQIACYAVATGLI >gi|289777623|gb|GG745508.1| GENE 554 637387 - 637611 244 74 aa, chain - ## HITS:1 COG:no KEGG:STM1949 NR:ns ## KEGG: STM1949 # Name: yecF # Def: hypothetical protein # Organism: S.typhimurium # Pathway: not_defined # 1 74 1 74 74 94 93.0 1e-18 MSTPDFSTAENNQELAQEVSCLKAMITLMLQAMGQADAGRVIIKMEKQIAQMEDEAQAAV FSSTVKQIKQAYRQ >gi|289777623|gb|GG745508.1| GENE 555 638229 - 638729 493 166 aa, chain + ## HITS:1 COG:STM1947 KEGG:ns NR:ns ## COG: STM1947 COG2197 # Protein_GI_number: 16765285 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 166 53 218 218 298 93.0 2e-81 MDMNMPGIGGLEATRKIARSVAGTKVIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVV NAIRCVASGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISE QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAESLASQ >gi|289777623|gb|GG745508.1| GENE 556 638726 - 640558 1846 610 aa, chain + ## HITS:1 COG:STM1946 KEGG:ns NR:ns ## COG: STM1946 COG0322 # Protein_GI_number: 16765284 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Salmonella typhimurium LT2 # 1 610 1 610 610 1168 94.0 0 MSDVFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV ALIAQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG AKHAKGEYFGPFPNGYAVRETLALLQKIFPVRQCENSVYRNRSRPCLQYQIGRCLGPCVA GLVSEEEYAQQVEYVRLFLAGKDDQVLTQLIARMEKASQSLEFEEAARIRDQIQAVRRVT EKQFVSNTGDDLDVIGVAFEAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV GQFYLQGSQMRTLPGEILLDFSLGDKTLLAESLSELAGRRINVQTKPRGDRARYLKLART NAATALTTKLAQQSTIHQRLQALATVLELPAVKRMECFDISHTMGEQTVASCVVFDSNGP LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDENKIPDVILIDGGKGQLAQAKAVFA ELDVPWDKHHPLLLGVAKGSDRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDH AISGHRKKRAKVKSTSSLETIEGVGPKRRQMLLKYMGGLQGLQQASVEEIAKVPGISHGL AEKIFYSLKH >gi|289777623|gb|GG745508.1| GENE 557 640616 - 641164 724 182 aa, chain + ## HITS:1 COG:STM1945 KEGG:ns NR:ns ## COG: STM1945 COG0558 # Protein_GI_number: 16765283 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 182 1 182 182 266 89.0 2e-71 MQFNIPTLLTLFRVILIPFFVLAFYLPFSWAPFACALIFFVAAVTDWFDGFLARRWNQST RFGAFLDPVADKVMVAIAMVLVAEHYHTWWVTLPAATMIAREIIISALREWMAELGKRSS VAVSWIGKVKTTAQMAALVWMLWRPYPWVEWAGIALFLVAAVLTLWSMLQYLNAARGDLL DQ >gi|289777623|gb|GG745508.1| GENE 558 641869 - 642759 123 296 aa, chain - ## HITS:1 COG:no KEGG:KPK_1875 NR:ns ## KEGG: KPK_1875 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 296 1 296 296 556 98.0 1e-157 MRYDIKENYLKIHLIKTTYKTLLGRPADSDGLKNYLNAIANKSLAESAEFLNSSLMHSDE FIAFTKSRMSSDKFSYTLQALTESAPDDSMHVKHIVSLGSHCLTSWTLKKFNLKKISLPF DWLFSCPAMIIDYLRDDFTSFLDKNEYSSLRRQSREPGAHHNKYKEKYRLNDIFTHRDPN TPADYEYYVRAVKRFRNILKSKEGKLFVICCREEIDIAKQLPELVTELSHHTTNFYLLAF ALQKPAYLQLERISSGENYSLYSLTPESEERFTGKFSSLTDEMVIISKVLSFNLEL >gi|289777623|gb|GG745508.1| GENE 559 643089 - 643970 690 293 aa, chain + ## HITS:1 COG:mll6376 KEGG:ns NR:ns ## COG: mll6376 COG0329 # Protein_GI_number: 13475334 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mesorhizobium loti # 1 292 4 295 296 223 44.0 3e-58 MFTGLCAFPLTPLHQQHLDEKAFIRILSRLTDTGVDSLGILGSTGSYAYLSREQRKRVVQ VAKAHVGSIPMMVGVGAIATSEVLRLVEDAQQAGADALLLPMMSYQPLSAEEIFAFYEEV CRHVSVPVCLYDNPRTTHVTLADELQGRIAALPAIASIKIPGLPEPQASERVATLRRHLP ARVTLGASGDSLATAGLQAGCQVWYSVCGGLFPQLSGALVRAIRSGDAARVAALNAQLAP LWRCFDRYGGSLRVIASAAAILGLCDPDCLPRPLLPLGEEAIRDVAAALHGLA >gi|289777623|gb|GG745508.1| GENE 560 644058 - 644726 826 222 aa, chain + ## HITS:1 COG:ECs2616 KEGG:ns NR:ns ## COG: ECs2616 COG3318 # Protein_GI_number: 15831870 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Escherichia coli O157:H7 # 1 220 1 220 221 311 66.0 7e-85 MNTGPLNENELEWLDETLAKYATEGAILDVSELDGLLTAILSAPTDIEPAQWLVAIWGGA DNVPRWANDRERDRFVDLTLQHMSDIAERLESYPDQFEPLFGTREAEGQELTIVEEWCFG YLRGVALSDWSTLPAELKPALDAIALHGSEAQFTALDNLTADEFIDSIERITPAALALYQ YWMANPLPVVVPQPVRNEAKVGRNDPCPCGSGKKYKQCCLAK >gi|289777623|gb|GG745508.1| GENE 561 644754 - 645896 1428 380 aa, chain - ## HITS:1 COG:STM1937 KEGG:ns NR:ns ## COG: STM1937 COG0814 # Protein_GI_number: 16765278 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 380 24 403 403 520 80.0 1e-147 MPLAAAGVGFTVTLGLLFTLWALMCYTALLLLEVYQHVPADMGLGSLAARYLGRYGQWVT GFCMLFLLYALTAAYISGAGELLASSLNQWLDWQLPPAAGVLLFTALGGAVVCIGTSLVD LFNRFLFSAKIIFLVIMLALLMPHIHQVNLLTLPVEQGLALSAIPVIFTSFGFHGSVPSI VSYLGGDIRKLRRVFIIGSFIPLVAYIFWQLATLGSINPPAFTALLAKNAGLNGLLEAIR EVVASPHVELAVHLFADLALATSFLGVSLGLFDYLADVFQRKNSVSGRLQSGAITFLPPV AFALFYPRGFVMALGYAGVALAVLALMLPALLAMKSRRQHPQAAWRVVGGAPALWLVLLC GIGIVAIQFSIVAGLLPAVG >gi|289777623|gb|GG745508.1| GENE 562 646156 - 646395 182 79 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1702 NR:ns ## KEGG: Kvar_1702 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 79 1 79 79 130 100.0 2e-29 MSSIHGHEVLQMMLASGESWTVASLEAAIRRRFGEEARFHTCSEENLSAAELVAFLEKKG KFIAREEGFTTAENKICRH >gi|289777623|gb|GG745508.1| GENE 563 646432 - 646929 707 165 aa, chain - ## HITS:1 COG:STM1935 KEGG:ns NR:ns ## COG: STM1935 COG1528 # Protein_GI_number: 16765276 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Salmonella typhimurium LT2 # 1 165 1 165 165 286 95.0 1e-77 MLKTEMIDKLNEQMNLELYSSLLYQQMSAWCSYHSFEGAAAFLRRHAQEEMTHMQRLFDY LTDTGSLPRINAIASPFAEYASLDELFRQTYEHEQLITQKINELAHAAMTSQDYPTFNFL QWYVAEQHEEEKLFKSVIDKLTLVGKSGEGLYFIDKELATLDTQN >gi|289777623|gb|GG745508.1| GENE 564 647341 - 647979 994 212 aa, chain + ## HITS:1 COG:YPO1991 KEGG:ns NR:ns ## COG: YPO1991 COG0698 # Protein_GI_number: 16122233 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 1 212 1 212 212 403 91.0 1e-112 MKIALMMENSQANKNAIILKELNAVADEKGFPVFNVGMSDEHDHHLTYIHLGIMASILLN SKAVDFVVTGCGTGQGALMSLNIHPGVVCGYCIDPADAFLFAQINNGNALSLPFAKGFGW GAELNVRFIFEKAFTGRNGEGYPPERKEPQVRNAGILNQVKAAVVKENYLDTLRAIDPEL VKTAVSGPRFQQCFFENCQDKAIEAFVRQIVG >gi|289777623|gb|GG745508.1| GENE 565 648013 - 649437 1636 474 aa, chain - ## HITS:1 COG:mll1728 KEGG:ns NR:ns ## COG: mll1728 COG0477 # Protein_GI_number: 13471679 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 17 469 21 471 477 338 45.0 1e-92 MNTAISSRDERAFSAPALLVAGAFFMEFLDGTVIATALPDMAKDFGVTAVELNIGISAYL ITLAVLIPASGWIADRFGARAIFTLALAIFTLASVFCGLSTEVHTFVAMRILQGIGGALM VPVGRLAVLRTTPKHLLIKAIATLTWPALVAPIIGPPLGGFITRYASWHWIFFINVPLGL AAIILALRIIPDIRETERRSFDLTGFITTAVAMVSLVTAMERLGDRQPQIWPTLALAVLG FGCLTYAIRHFRRATAPMVRLDALQVPTFRVTMYGGSLFRSSISAVPFLLPLLFQVGFGM DPFHSGLLVLAVFVGNLTIKPATTPLIRWLGFRRLLLINGALNVCSLLACALLTPQTPVW AIMLILYLGGVFRSIQFTGVSTLAFADVPAAQMSDANTLFSTASQLAVGLGITLGAIGIR LGEQVGDWLHLSTLPGISFRLSFVFIAVICLVGMIDSLHLAKTAGSSVSEKKTK >gi|289777623|gb|GG745508.1| GENE 566 649934 - 650185 445 83 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1706 NR:ns ## KEGG: Kvar_1706 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 83 1 83 83 127 100.0 2e-28 MSQHLTEHDELVSDVVACQLVIKQILDVIDVIAPVEVREKMTTQLKAIDFASHPASADPV TLRAVQKAIALIELKFTPQEETH >gi|289777623|gb|GG745508.1| GENE 567 650223 - 651785 1960 520 aa, chain - ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 23 511 1 488 498 606 64.0 1e-173 MARYTASAPEGLQGRPILLRHQLAYGGGNLLGSGALAISGAWLLYFYTTFCGLTLIEASF IFSVASIIDAISNPLMGYLTDNFGKTRLGKRFGRRRFFLLIGIPLMMFYPLLWVEGLSFW YYLCTYVVFEIIYTSIMVPYETLATEMTDDFSLRSKLTGYKAIFGKLANFLAAFIPGQFI LLYGKDSATPFFLTGLTYGVILIVAISCLWLCSWERKREEEIETSARKGLLSTLLSLAKD MRSTFYLRVFRKHLGMYLCGFGAEWLFASIFTYFVIFVLQHDPAMVAGLNSLNSILQLIS TALFIGLCVKKGFSKPYILALGIVIFAVLLYTSLWFFHLPSGLATVLMFGITVLFGLGTG GVYYIPWTVYTFLADVDEIYTGRRREGIYAGAMTFSGKILRSIVVFSMGAILSFYGFQSK AHSQPESAVTAIAVVFCVGVIALALAAIVFSKQMKLDRKAHLVVLQEVARIKAGGKISDI APDVRVIVEDLVGHRYEECWGNSKLFKDAAPAPAQTVVSH >gi|289777623|gb|GG745508.1| GENE 568 652029 - 652538 456 169 aa, chain - ## HITS:1 COG:STM1932 KEGG:ns NR:ns ## COG: STM1932 COG1528 # Protein_GI_number: 16765273 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Salmonella typhimurium LT2 # 1 162 1 162 167 176 56.0 2e-44 MAVPGMAQKLNTQMNLEFHASNVYLNLSEWCARHRFDGAATFLRTRAQSSITLTMRVFDY LKKAGSWPIVNPDRACNPECTSLEDLFTQTLNDYQQRSSMLSGLAEEARAQSDDNTWRFL TLLAEEQQQDGLLLQSVLEEIRNADKAGLGMEQTDRRLMALVGEPRKPH >gi|289777623|gb|GG745508.1| GENE 569 653428 - 654408 1456 326 aa, chain + ## HITS:1 COG:araF KEGG:ns NR:ns ## COG: araF COG1879 # Protein_GI_number: 16129851 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 326 1 326 329 591 91.0 1e-169 MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFDVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVITVDDQFVNAKG KPMESVPLVMMAASEIGARQGQELYKEMQKRGWDVKDTAVMAITADELDTARRRTTGSID ALKAAGFPDAQIYRVPTKSNDIPGAFDAGNSMLVQHPQVKHWLIVGMNDNTVLGGVRATE GQGFKAPDVIGIGINGVDAVNELSKAQPTGFYGSLLPSPDIHGYKTSEMLYNWVTKGVEP PKFTAVTDVVLITRDNFKEELAKKGL >gi|289777623|gb|GG745508.1| GENE 570 654469 - 655983 181 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 477 20 217 245 74 25 2e-11 MQQSTPYLSFRGITMTFPGVKALSDISFDCYPGQIHALMGENGAGKSTLLKILSGNYIPT AGHLQIGGQQMAFSNTMEALNAGVAIIYQELHLIPEMTVAENIYLGQLPHRGGIVNRSLL NYEARLQLEHLGLDIDPETPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREID NLFRVIRELREEGRVIIYVSHRMEEIFALSDAITVFKDGRYVCTFDDMPSVSHDALVQAM VGRNLGDIYGWKPRPYGEERLRLEEVKAPGVRTPVSLSVRSGEIVGLFGLVGAGRSELMK GLFGGTRITDGQVYIDGQPVDIRKPAQAIQAGMMLCPEDRKAEGIIPVHSVRDNINISAR RKHIHAGCLINNAWEADNADQHIQSLNIKTPGPEQLIMNLSGGNQQKAILGRWLSEEMKV ILLDEPTRGIDVGAKHEIYNVIYGLAASGVAVVFASSDLPEVLGVADRIVVMREGQIAGE LLHEEANEQQALSLAMPKVSQAVA >gi|289777623|gb|GG745508.1| GENE 571 655998 - 656978 1488 326 aa, chain + ## HITS:1 COG:YPO2257 KEGG:ns NR:ns ## COG: YPO2257 COG1172 # Protein_GI_number: 16122481 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 10 324 33 347 349 489 90.0 1e-138 MSSVTTSGATRSAFSFARIWDQFGMLVVFAVLFIGCVIFVPNFASFVNMKGLGLAISMSG MVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLSESLWLGIAAGLLLGAVSGLVNGF VIARLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWFGLPAPIWLTVA CLVVFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASR MTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFS QYVVRGVILLAAVIFDRYKQKAKRAA >gi|289777623|gb|GG745508.1| GENE 572 657140 - 657928 648 262 aa, chain + ## HITS:1 COG:STM1929 KEGG:ns NR:ns ## COG: STM1929 COG1877 # Protein_GI_number: 16765271 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Salmonella typhimurium LT2 # 1 262 1 267 267 337 65.0 1e-92 MDNQISVPPALTGNYAFFFDLDGTLADIQPHPDQVVIPDNTLQALNALAQQQGGAVALIS GRSMAELDALTHPWRLPLAGVHGAERRDINGKTYIVSLPSALRDEIATELTSALQGLPGC ELESKEMAFALHYRQAPQQQSAVLELAQRIVQRYPLLALQLGKCVVEIKPRGVNKGEAIS AFMQEAPFAGREPVFVGDDLTDEAGFSVVNQLQGMSVKVGAGETQAHWRLADAAAVRTWL QHLAYDAQTERRDDHESFSRSL >gi|289777623|gb|GG745508.1| GENE 573 657903 - 659327 1825 474 aa, chain + ## HITS:1 COG:otsA KEGG:ns NR:ns ## COG: otsA COG0380 # Protein_GI_number: 16129848 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Escherichia coli K12 # 1 474 1 474 474 791 82.0 0 MSRLVVVSNRIALPDDKKSSAGGLAVGILGALKAAGGLWFGWSGEIGDDQQPLKQVSRGN ISWASFNLNERDHDEYYNQFSNAVLWPAFHYRLDLVSFQREAWEGYLRVNAMLADKLLPL IEPDDTLWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHAELLEQLCDY DLLGFQTESDRTAFLDSIAMQTRLSDLGDKRYQAWGKAFSTEVYPIGIDPDEITRNAKGP LPPKLAQLKNELKNVKNIFSVERLDYSKGLPERFLAYETLLEKYPQHHGKIRYTQIAPTS RGDVQAYQDIRHQLETAAGRINGQFGQLGWTPLYYLNQHFDRKLLMKVFRYSDVGLVTPL RDGMNLVAKEYVAAQDPDNPGVLVLSQFAGAAQELTSALIVNPYDRDEVATALDRALSMP LAERIARHSAMLDVIRENDIHNWQARFVDDLQHISPRSEESRLRGKIATFPKLA >gi|289777623|gb|GG745508.1| GENE 574 659351 - 659779 442 142 aa, chain - ## HITS:1 COG:STM1927 KEGG:ns NR:ns ## COG: STM1927 COG0589 # Protein_GI_number: 16765269 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 1 139 1 139 142 186 67.0 1e-47 MPYSHLLVAVAPTPESQILIKKAVSIARPVNAKVSFITFATDPEMYNQFAAPMMENLREL MQEETREFLNELARQADYPIEKMTIACGELGHHVKDFCQSHKVDLVICGNHNHSLFSRAT CSAKNIVGSSGVDVLLVSLEKG >gi|289777623|gb|GG745508.1| GENE 575 660132 - 661715 1841 527 aa, chain + ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 12 502 1 483 498 383 40.0 1e-106 MKTRKIGLANYLAYGAGDFLGAGTTALTAAWLLYFYTTFCGLTPIEATLIFAAARVLDAV VSPLMGFLTDNFGTTWLGKRFGRRKFFILLGIPCVFSYSAMWVGEMGFWYYLVTYLLFDM VYTMILVPYETLVPEMTDDFKQKTKFSGARISMAQMSAILASFLPGILLTWLGKDNASSF FYASLVFSVLCAVMLTFVWCFTWERPREAWSEAALRAEAEKQNLTLAQSLNRLVIELSST LRIKIFRQHLGMYLGGYIAQDVFNAVFTYYVVFVLMQEASVASNLLGTMAIFQFIAVIAM IPLCIRFGPAPSYRMVVVLFGLSSLSYALLYYAGLSDVYSLLLLISAVAGLGRGGINYVP WNTYTYIADVDEAITGQRREGIFAGIMTLTRKASQAGAVMLVGIIMQLSGFVSGQKIQPP GVSHTILLILSVGTLVVLACGFLVSLRFKLNLHTHSILRSETLRMRDLGSAQPEQTIAEH RAVVEMLAGMPYDCLWGNNNIGYLNRHKPAAPGLTQGGALNSTYTRG >gi|289777623|gb|GG745508.1| GENE 576 661720 - 662859 1573 379 aa, chain + ## HITS:1 COG:STM1911 KEGG:ns NR:ns ## COG: STM1911 COG4225 # Protein_GI_number: 16765253 # Func_class: R General function prediction only # Function: Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 679 86.0 0 MKVWPVKHSPLLCQPERFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGW AGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGATTKNVNTMAPFLTLAYRF EETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMTVLPLAKIG KLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWSYEGRHNFARARWARGNSWLTMVIP DFLELVDLPEGNAVRRYLMTVLDAQIAALAKCQDDSGLWHTLLDDPHSYPEASATAGFAY GILKAVRKRYVGQHYAGVAEKAIRGIVHNISPQGELLQTSFGTGMGADLDFYRQIPLTSM PYGQAMAILCLTEYLRKYF >gi|289777623|gb|GG745508.1| GENE 577 662921 - 664654 2421 577 aa, chain - ## HITS:1 COG:STM1909 KEGG:ns NR:ns ## COG: STM1909 COG0018 # Protein_GI_number: 16765251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 1072 91.0 0 MNIQALLSEKVSQALIAAGAPADCEPQVRQSAKVQFGDYQANGVMAVAKKLGMAPRQLAE QVLSHLDLNGIANKVEIAGPGFINIFLDPAFLADNVNRALQSERLGVTKPQAQTIVVDYS APNVAKEMHVGHLRSTIIGDASVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN ASEMALADLEGFYREAKKHYDEDEAFAERARSYVVKLQGGDQYFLQMWRKLVDITMSQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPD SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENL AKVVGIGAVKYADLSKNRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAGIDENA MIDAPVVIAEDREAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL SAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM >gi|289777623|gb|GG745508.1| GENE 578 664890 - 665459 571 189 aa, chain + ## HITS:1 COG:STM1908 KEGG:ns NR:ns ## COG: STM1908 COG3102 # Protein_GI_number: 16765250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 187 1 187 189 325 82.0 3e-89 MANWQQIEQLADITADLPRFSDALQRFTARLGLEIAGLDADHISLRCHQNTTAERWRRGL EQCGTLLSENMINGRPICLFKLAEPVCVAHWRFHIIELPWPGEKRYPHEGWEHIEIVLPG DPATLNARALALLADDGLSQPGIVVKTSSPKGQHERLPNPTLAVTDGSVTVKFHPWSIEQ IVASEQADT >gi|289777623|gb|GG745508.1| GENE 579 665536 - 666279 467 247 aa, chain + ## HITS:1 COG:STM1907 KEGG:ns NR:ns ## COG: STM1907 COG3142 # Protein_GI_number: 16765249 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Salmonella typhimurium LT2 # 1 242 1 242 248 345 72.0 5e-95 MAVLEVCCYSMACAREAERCGADRIELCAAPQEGGLTPSYGVLVSVREAITLPVHPIVRP RGGDFCYTEEEFAAMLSDICMVRELGFPGVVTGVLNADGQVDIPRMKKIMAAAGPLAVTF HRAFDLCADPRQAWKTLGELGVKRILTSGQQSSAEKGISLITELIAAGDTPIIMAGAGVR AANLPLLLQAGVKEVHSSAGQWLPSEMRFRHPGVSMSADPDADEYRRYAVNGEAVAEMKG IISAWRS >gi|289777623|gb|GG745508.1| GENE 580 666361 - 667365 1264 334 aa, chain - ## HITS:1 COG:STM1906 KEGG:ns NR:ns ## COG: STM1906 COG0500 # Protein_GI_number: 16765248 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 323 1 323 323 580 85.0 1e-166 MIDFSNFYQLIAKSPLSHWLETLPAQVAAWQREALHGKFREWERAVEFLPELTPWRLDLL HSVTAESETPLSEGHQLRVENLLKNLMPWRKGPYSLYGINIDTEWRSDWKWERVLPHLSD LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG IEQLPALEAFDTVFSMGVLYHRRSPLDHLWQLKDQLAPGGELVLETLVVEGDENTVLVPG DRYAQMRNVYFIPSAAALKMWLEKCGFIDVRIVDACVTSTDEQRRTEWMTSESLADFLDP QDQRKTVEGYPAPLRAVIIATKPETQQSLAKKAR >gi|289777623|gb|GG745508.1| GENE 581 667362 - 668105 1062 247 aa, chain - ## HITS:1 COG:STM1905 KEGG:ns NR:ns ## COG: STM1905 COG0500 # Protein_GI_number: 16765247 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 247 1 247 247 477 90.0 1e-134 MSHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQV YDLGCSLGAATLSVRRNISHPGCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRD VAIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGALVLSEKFSFEDAHVGELLFNM HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVA VKSGEQA >gi|289777623|gb|GG745508.1| GENE 582 668145 - 668540 509 131 aa, chain - ## HITS:1 COG:ECs2579 KEGG:ns NR:ns ## COG: ECs2579 COG3788 # Protein_GI_number: 15831833 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Escherichia coli O157:H7 # 1 131 11 141 141 204 83.0 4e-53 MVSALYAVLGALLLVKFSFDVVRLRTQYHVGYGDGGFSELQVAIRVHGNAVEYVPIGLIL LLFMEMNGAQTWMVHVCGILLIVGRLMHSWGFHHRVYHWRRSGMSATWCALLLMVLANLW YMPWELVFSLR >gi|289777623|gb|GG745508.1| GENE 583 668593 - 669411 840 272 aa, chain - ## HITS:1 COG:yecE KEGG:ns NR:ns ## COG: yecE COG1801 # Protein_GI_number: 16129821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 272 1 272 272 448 79.0 1e-126 MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEIVTRWYEQTHDDFRF CFKFPATISHQAALRHCDDLSSEFFDRLAPLASRIGQYWLQLPATFGPRDLPALWHFLDG LPKDFTYGVEVRHPEFFAKGEAEQQLNRGLHERNVNRVILDSRPVHSAAATSPAMIDAQK KKPKVPVHAVMTARQPMVRFIGGDDMAHNRELFRVWLQTLPKWHQSGTPWLFLHTPDIAY APTLVDTLWSDLRTALPAAGNAPSIPQQSSLF >gi|289777623|gb|GG745508.1| GENE 584 669408 - 669974 608 188 aa, chain - ## HITS:1 COG:STM1902 KEGG:ns NR:ns ## COG: STM1902 COG1335 # Protein_GI_number: 16765244 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 326 85.0 2e-89 MLELNAKKTALVVIDLQEGILPFAGGPHRADEVVARAARLADKCRQQGSPVIMVRVGWSA DFAEALKQPVDAQAGAHTLPENWWTYPATLGKQESDIEVTKRQWGAFYGTDLELQLRRRG IDTIILCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHQGSMTHIFPRIGRVRS TEEILAAL >gi|289777623|gb|GG745508.1| GENE 585 670242 - 672029 2534 595 aa, chain + ## HITS:1 COG:ECs2576 KEGG:ns NR:ns ## COG: ECs2576 COG0173 # Protein_GI_number: 15831830 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 586 1 586 590 1130 93.0 0 MRTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA SELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLDSNHVNTEEA RLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT APQVREIMEAMVRQLWLEIKGVDLGDFPIMTFAEAERRYGSDKPDLRNPMELVDVADLLK SVEFAVFAGPANDPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVTERAKG MDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLT DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTANELKAAPEEAVANAYDMVING YEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAKASLENK >gi|289777623|gb|GG745508.1| GENE 586 672031 - 672474 461 147 aa, chain + ## HITS:1 COG:STM1900 KEGG:ns NR:ns ## COG: STM1900 COG0494 # Protein_GI_number: 16765242 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 3 147 6 150 150 241 84.0 3e-64 MSFKLPVSVLVVIYAEDTKRVLMLQRRDDPAFWQSVTGSLEAGETALQAAAREVKEEVAI DVACEQLTLIDCQRTVEFEIFSHLRHRYAPGVERNTEFWFCLALPHEREITFTEHLAYRW VSATEAAALTKSWSNRQAIEEFVINAA >gi|289777623|gb|GG745508.1| GENE 587 672502 - 673242 1044 246 aa, chain + ## HITS:1 COG:STM1899 KEGG:ns NR:ns ## COG: STM1899 COG0217 # Protein_GI_number: 16765241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 427 94.0 1e-119 MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPASNPRLRAAVDKALSNN MTRDTLNRAIARGVGGDEDANMETIIYEGYGPGGTAVMVECLSDNRNRTVAEVRHAFTKT GGNLGTDGSVSYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMG AVRDALEAAGLKADAAEVSMIPSTKADMDAETAPKLLRLIDMLEDCDDVQEVYHNGEISD EVAATL >gi|289777623|gb|GG745508.1| GENE 588 673277 - 673798 608 173 aa, chain + ## HITS:1 COG:ECs2573 KEGG:ns NR:ns ## COG: ECs2573 COG0817 # Protein_GI_number: 15831827 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 291 95.0 3e-79 MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ PDYFAIEQVFMAKNADSALKLGQARGVAIVAATNQSLPVFEYAARQVKQTVVGIGSAEKS QVQHMVRTLLKLPANPQADAADALAIAITHCHISQNVAQVSETRLNLARGRLR >gi|289777623|gb|GG745508.1| GENE 589 673878 - 674489 951 203 aa, chain + ## HITS:1 COG:STM1895 KEGG:ns NR:ns ## COG: STM1895 COG0632 # Protein_GI_number: 16765237 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Salmonella typhimurium LT2 # 1 203 1 203 203 365 94.0 1e-101 MIGRLRGIILEKQPPLVLLETAGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVASLVKLPGIGKKT AERLIVEMKDRFKGLHGDLFTPAADLVLTSPAGPTADDAEQEAVAALVALGYKPQEASRM VSKIARPDANSETLIREALRAAL >gi|289777623|gb|GG745508.1| GENE 590 674498 - 675508 1397 336 aa, chain + ## HITS:1 COG:STM1894 KEGG:ns NR:ns ## COG: STM1894 COG2255 # Protein_GI_number: 16765236 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 617 95.0 1e-177 MIEADRLVSADSNGAEEAVDRAIRPKLLAEYVGQPQVRSQMEIFIQAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR LEFYQIPDLQHIVSRSARHMGLEMSDEGALEVARRSRGTPRIANRLLRRVRDFAEVRHDG SISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP >gi|289777623|gb|GG745508.1| GENE 591 675572 - 676357 1190 261 aa, chain - ## HITS:1 COG:STM1893 KEGG:ns NR:ns ## COG: STM1893 COG1108 # Protein_GI_number: 16765235 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 261 1 261 261 375 93.0 1e-104 MIELLLPGWLAGMMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLNINPFYAV IAVTLLLAGGLVWLEKRPHLAIDTLLGIMAHSALSLGLVVVSLMSNVRVDLMAYLFGDLL AVTPQDLIAIAIGVVIVIGILLWQWRPLLAMTISPDLAFVDGVKLQRVKLLLMLVTALTI GVAMKFVGALIITSLLIIPAATARRFARTPEQMAAVAVGVGMLAVTGGLTFSAFYDTPAG PSVVLCAAVLFILSMTKKAAS >gi|289777623|gb|GG745508.1| GENE 592 676357 - 677109 217 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 202 1 212 305 88 29 1e-15 MTNLVTLENVSVAFGQRRVLSDISLALTPGKILTLLGPNGAGKSTLVRVVLGLVAPTEGV IKREDRLRIGYVPQKLHLDATLPLTVSRFLRLRPGTRKDDILPALKRVQAGHLIDAPMQK LSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRHELDCAVLMVSHD LHLVMAKTDEVLCLNQHICCSGAPEVVSMHPEFISMFGPRGAEQLGIYRHHHNHRHDLQG RIVLRRGNSR >gi|289777623|gb|GG745508.1| GENE 593 677280 - 678131 347 283 aa, chain + ## HITS:1 COG:STM1891 KEGG:ns NR:ns ## COG: STM1891 COG4531 # Protein_GI_number: 16765233 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 1 283 51 333 333 480 83.0 1e-135 MKPLGFIAAAIADGVTDTQVLLPDGASEHDYSLRPSDVKRLQNADLVVWIGPEMEAFMDR STQSIAANKKVTIAELEGVKPLLMTGADDDDDHDGHDHGAAEKSDGDHHHGIYNMHLWLS PEIARLSAVAIHDKLLELMPQSRAKLDSNLQQFEAALAATDKQVSNELAPLKGKGYFVFH DAYGYFEKHYGLTSLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIEAV ARGTSVRMGTLDPLGTGITLGKASYPQFLTQLANQYSSCLKGD >gi|289777623|gb|GG745508.1| GENE 594 678147 - 679466 1647 439 aa, chain + ## HITS:1 COG:STM1890 KEGG:ns NR:ns ## COG: STM1890 COG0739 # Protein_GI_number: 16765232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 1 439 1 439 439 793 89.0 0 MQQIARAVTQAFNNLPRPHRVMLGSLSVLTLAVAVWRPYIYHPESAPIVRTIELEKSEIR SLLPEASEPIDQAPQEEEAIPQDELDEKADTDAGGHEYVVSTGDTLSSILNQYGIDMGDI AQLSSADKELRNLKIGQQLSWTLTADGDLQSLTWEMSRRETRTYTRVDNGFKMSSELQKG DWVNNVLKGIVGASFVSSARDAGLTSTEISAVIKAMQWQMDFRKLKKGDEFSVLMSREML DGKREQSQLLGVRLRSDGKDYYAIRAEDGKFYDRNGTGLAKGFMRFPTARQFRVSSNFNP RRLNPVTGRVAPHRGVDFAMPQGTPVLAVGDGEVVVAKRSGAAGYYVAIRHGRTYTTRYM HLRKLLVKPGQKVKRGDRIALSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLSGS DRTDYLAQVKEVVPQLRFD >gi|289777623|gb|GG745508.1| GENE 595 679584 - 680555 1137 323 aa, chain + ## HITS:1 COG:msbB KEGG:ns NR:ns ## COG: msbB COG1560 # Protein_GI_number: 16129808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli K12 # 1 323 1 323 323 567 84.0 1e-162 METKKNNIEFIPKFEKSFLLPRYWGAWLGVFAFAGIALTPPSFRDPILGKLGRFVGRLAK SSRRRAQINLLYCFPEKSEHEREAIIDAMYASAPQAMVMMAELGLRDPQKILARVDWQGK EIIDEMQRNNEKVIFLVPHAWGVDIPAMLMASGGQKMAAMFHNQGNPVFDYVWNTVRRRF GGRMHARNDGIKPFIQSVRQGYWGYYLPDQDHGAEHSEFVDFFATYKATLPAIGRLMKVC RARVVPLFPVYDGQTHRLTVLVRPPMDDLLDADDTTIARRMNEEVEVFVKPHTEQYTWIL KLLKTRKPGEIEPYKRKELFPKK >gi|289777623|gb|GG745508.1| GENE 596 680586 - 681302 289 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 3 228 2 226 226 115 35 5e-24 MFNVLIVDDDPMVADLNRLFISRVADFHCCGVAATIGDAKAMLSHLAQVDLLLLDVYMQQ ENGLDLLPALRADGRNIDVIMMTSAADTLTLQTALHYGVVDYLIKPFQFPRFEEALQAWR KKREVTQAKSCYAQADIDTLLRRGIPQQESARRLPKGLTPQTLRLVCQWIDDHQARDFST NELAAALQISRVSCRKYLIWLEQINVLFTTNHYGITGRPEYRYRLVVENLMLLTQYSQ >gi|289777623|gb|GG745508.1| GENE 597 681367 - 683052 1637 561 aa, chain - ## HITS:1 COG:YPO1511 KEGG:ns NR:ns ## COG: YPO1511 COG0281 # Protein_GI_number: 16121784 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 7 561 11 565 565 782 67.0 0 MLATETLYTPYNGAVLLENPLLNKGLAFTESERTAFNLQGLLPHNVETIEEQTERAWGQF CQFKKSISRHIYLRNIQDTNETLFYNLLRSHMKETLPVIYTPTVGEACEHFSEIYRRGRG LFISWPNRHQIDEMLQGFSRNDIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGG IHPASTLPIMLDVGTNNPQHLEDPLYMGWRHPRISDEQYLEFMDMFVHAIQQRWPNVLLQ FEDFAQKNATRLLNRYRHQLCCFNDDIQGTAAVTSGTLIAAAAAAGTPIRDQRVVFLGGG SAGCGIAEKIIALMVDDGLSQEEARRRIFMVDRFGLLTDEMPNLLDFQRDLVTPRASIAH WDTESAQLSLMDVVRNVHPTVLIGVSGQPGLFSEEIVKEMHRHCPRPIIMPLSNPTSRAE AQPKDLLEWTRGSALIATGSPFEPVFYDGKTYDIAQCNNAYIFPGLGLGILASKAQRVTE AMLITCSKTLAAHSPLASRETGALLPPVEEIEMISRAIAAEVARAAQRDGVAPRIDEAQL AANIDKTFWRARYTAYKRSSF >gi|289777623|gb|GG745508.1| GENE 598 683115 - 684062 1020 315 aa, chain - ## HITS:1 COG:BS_ywkB KEGG:ns NR:ns ## COG: BS_ywkB COG0679 # Protein_GI_number: 16080757 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus subtilis # 5 315 6 319 319 116 27.0 7e-26 MPSLLLQSLFPLVFIMLLGWLSGKLGYTRREDASVLATVVIRFALPFHLFIGALNTHPDK IKNFTFMAVLVIGLMGSYFLTLLISRYVFRHDIKTSAIQSLVCAFPDMAYFGAPVLAVLI GPEGFLGVLIGNLVTSVLMIPLTIILIRMGDKHRSADEPQLHAGQLILQNLLKAVRNPIV WIPISGVLLSLAGVQLPPMLSMPIEMVGKIAGGLSLFALGLLFYGERPTVNIQTCTNISI KNLIQPAMMALAGLAFGLSHTLMQQVIIIGATPSAIAAGMFALRSDTYIEPASSSILLGT AIGVVTEGIMIYLIS >gi|289777623|gb|GG745508.1| GENE 599 684482 - 685816 1241 444 aa, chain + ## HITS:1 COG:BS_yufR KEGG:ns NR:ns ## COG: BS_yufR COG3493 # Protein_GI_number: 16080210 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Bacillus subtilis # 10 442 10 445 448 453 58.0 1e-127 MENNSLNHPIDKTQPNGQSTRLLSNIDVGAVPLTLFIGIAAIVALSASAGLLPKNMIGGL AVIMTLGFALAKIGRMVPVLKDIGGPAILCLMMPSVLVYFGVFEAHTLDTVHLLMKEANL LYFVIACLVVGSILGMNRTILIQGMVRMFVPLVAGTGAAILTGLLVGSLFGYSIYHTFFF IIVPIIGGGIGEGILPLSLAYSAILGQTPDVYVAQLAPAAVVGNIFAIICAGFLARMGAR RPALSGNGMLIRSHDDNSVFAQHQSTQPTDFQLMGAGLLMICAFFIVGGLLEKVVHIPGP VLMILAAVFCKYTNVIPAAMELGAHSCYKFVSAALVWPLMIGLGMLYVPLESVVSVFSVG YVVVCGSIVIAMALSGFFIAARLNMYPVEAAIVTSCHSGLGGTGDVAILSASNRMGLMPF AQIATRIGGASTVIAATLLLSWVV >gi|289777623|gb|GG745508.1| GENE 600 685878 - 687320 1942 480 aa, chain - ## HITS:1 COG:STM1888 KEGG:ns NR:ns ## COG: STM1888 COG0469 # Protein_GI_number: 16765230 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Salmonella typhimurium LT2 # 1 480 1 480 480 860 95.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGTPEDHQLRADKVREIAAK LGRHVAILGDLQGPKIRVSTFKEGKIFLNVGDKFLLDANLGKGEGDKEKVGIDYKGLPAD VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTDKDKA DIVTAAKIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQDAMDDVI LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRSVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSLNVSKHRLDVQFDN VEEAIAMSAMYAANHLKGITAIITMTESGRTALMTSRISSGLPIFALSRHERTLNLTALY RGVTPVFFDSQNDGVAAAHDAVNLLRDKGYLVSGDLVVVTQGDVMSTIGSTNTTRILTVE >gi|289777623|gb|GG745508.1| GENE 601 687446 - 688333 845 295 aa, chain - ## HITS:1 COG:ECs2563 KEGG:ns NR:ns ## COG: ECs2563 COG1737 # Protein_GI_number: 15831817 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 7 295 1 289 289 489 90.0 1e-138 MSALLLMNMLEKIQSRLEHLSKSERKVAEVILATPAQAIHSSIAALALEAGVSEPTVNRF CRSLETRGFPDFKLHLAQSLAHGTLYVNRNVDEDDSVESYTGKIFESAMASLDQVHHSLD MSAVNRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCD DDDVVVIISHTGRTKSLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIY MPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKEPFVPSDNQ >gi|289777623|gb|GG745508.1| GENE 602 688511 - 688660 56 49 aa, chain + ## HITS:1 COG:no KEGG:KP1_3497 NR:ns ## KEGG: KP1_3497 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 49 1 49 49 94 100.0 2e-18 MPKSSPNVFTLCGFTAANEGEGFREIRKHSTVQCKKITNIAWQKHQTIN >gi|289777623|gb|GG745508.1| GENE 603 688671 - 690146 2162 491 aa, chain + ## HITS:1 COG:STM1886 KEGG:ns NR:ns ## COG: STM1886 COG0364 # Protein_GI_number: 16765228 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 491 1 491 491 978 95.0 0 MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQIHADTRIIGVGRADWDKAAYTK VVREALETFMKEKIDEGLWDSLSGRLEFCNLDVNDTSGFTRLGEMLDQQNRVTINYFAMP PSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLETSREINDQVGEFFEECQVYRIDHYLG KETVLNLLALRFANSLFVNNWDCRTIDHVEITVAEEVGIEGRWGYFDQAGQMRDMIQNHL LQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPG YLEEEGANKTSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLF KETWQELPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADA YERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAADRDAPKPYQAGTWGPVASVAMI TRDGRSWNEFE >gi|289777623|gb|GG745508.1| GENE 604 690369 - 692180 2005 603 aa, chain + ## HITS:1 COG:ECs2561 KEGG:ns NR:ns ## COG: ECs2561 COG0129 # Protein_GI_number: 15831815 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 603 1 603 603 1139 93.0 0 MNSTMLRVTNRIIERSRDTRAAYLARINQAKTDTVHRAQLACGNLAHGFAACQADDKASL KSMLRNNIAIITSYNDMLSAHQPYEHYPDIIRKALHSANAVGQVAGGVPAMCDGVTQGQD GMELSLLSREVIAMSAAIGLSHNMFDGALYLGVCDKIVPGLTMAALSFGHLPSVFIPSGP MASGLANKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQ LPGSSFVHPDAPLRDALTAAAARQVTRMTGNGNEWMPLGKMFDEKVVVNGIVALLATGGS TNHTMHLVAMARAAGIIINWDDFSDLSDVVPLLARLYPNGPADINHFQAAGGVPVLVREL LKGGLLHEDVHTVAGFGLSRYTLEPWLNNGELDWREGATAPLDDQVIATFEKPFSRHGGT KVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVLPAFEAGLLDKDCVVVVRHQGPK ANGMPELHKLMPPLGVLLDRRFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD GDVIRVNGQTGELTLLVDDAELAARQPHIPDLSASRVGTGREMFGALREKLSGAEQGATC ITF >gi|289777623|gb|GG745508.1| GENE 605 692219 - 692860 1070 213 aa, chain + ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 1 213 1 212 213 345 90.0 4e-95 MKNWKTTAEAILTSGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECALEAIRAI AKEVPDAIVGAGTVTNVEQLKAVTEAGAQFAISPGLTESLLKAATEDGTIPLIPGISTVS ELMLGMQYGLKEFKFFPAEANGGVKALQAIAGPFGHIRFCPTGGISPANYRDYLALKSVL CIGGSWLVPADALEAGDYDRITTLAREAVEGAK >gi|289777623|gb|GG745508.1| GENE 606 692918 - 694096 1416 392 aa, chain - ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 640 84.0 0 MTVLGTALRPAATKVMLLGSGELGKEVAIECQRLGIETIAVDRYPDAPAMQVAHRAHVIN MLHGESLRALIEQEKPDYIVPEIEAIATDTLVELEQAGQKVVPTARAAKLTMNREGIRRL AAEELQLPTSSYRFADSEEGFRAAVTDIGLPCIVKPVMSSSGKGQSFIRSADQLSEAWRY AQQGGRAGAGRVIVEGVVNFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMS DLALERAQAIARKVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPVGAIRQYGPAASAVILPQLTSQNVSFGQLQSAVGAGLQLRLFGKPEIDG TRRLGVTLAIADSVEEAVARAKTAAAAVIVEG >gi|289777623|gb|GG745508.1| GENE 607 694232 - 694579 442 115 aa, chain + ## HITS:1 COG:ECs2558 KEGG:ns NR:ns ## COG: ECs2558 COG3141 # Protein_GI_number: 15831812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 92 57.0 1e-19 MAVEIKYVVIREGEEKMSFASKKEADAYDKMLDLAEVLNDWLVASPLEMDDAQRDTMAMW LAERKEALQHILRVGRLPEQDASAHDSPAPSAAEEASQAEDAAAPATKARKAKVA >gi|289777623|gb|GG745508.1| GENE 608 694721 - 695383 642 220 aa, chain + ## HITS:1 COG:STM1880 KEGG:ns NR:ns ## COG: STM1880 COG2979 # Protein_GI_number: 16765222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 218 1 217 219 241 66.0 7e-64 MANWLNQLQSLLGQQGALSTGESSKGSALLPGAIGGLAGLLVASKSSRKLLAKYGTSALL AGGGAVAGTVLWNKYQQKMRAQNAPVPGANTPAAVPADVDPRSVRLITALVFAARSDGHI DDHERANIEAQLRAANIDVQARVLIDQALAQPLDPQRLAEGIVDPQEALEIYYVSCAVID IDHFMERSYLNALGDALSLPKDVRADIEQDIQSQKQALSV >gi|289777623|gb|GG745508.1| GENE 609 695504 - 697564 2780 686 aa, chain + ## HITS:1 COG:ECs2555 KEGG:ns NR:ns ## COG: ECs2555 COG1770 # Protein_GI_number: 15831809 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Escherichia coli O157:H7 # 1 685 1 685 686 1184 81.0 0 MPPKAKRIPHAMTLHGDTRIDNYYWLRDDERARPDVLEYLHAENAYGKRVMDSQLSLQER LLKEIIDRIPQREVSAPYSKNGFRYRQVYEPGCEYAIYQRQSVLKEEWDEWEILLDGNQR AAKSEFYTLGGLGVAPNNQLMAVAEDYLSRRQYGLRFCNLSSGEWYPEILENVTSGFAWS NDSRFVWYVRKHPTTLLPYQVWRHTVGTAAQSDVLVYEEKDETFYVSVHKTTSQQFVVIY LSSATTSEALLLNAELPDAEPVCFLPRRKDHEYSLDHYQHAFYLRSNREGKNFGLYRTVL RDEDQWTTLIPPRHDVMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVVGIAFDDPAY VTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVIKQQEVKGLDTSCYQSEHLW VTARDGVEVPVSLVYHREHFRKGSNPLLVYGYGSYGESIDADFSASRLSLLNRGFVYAIA HVRGGGELGQQWYEDGKFLSKKNTFNDYLDVCDALLAQGYGDPQLCYGMGGSAGGMLMGV AVNERPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDETYYHYMKSYSPYDG VRAQAYPHMLVTTGLHDSQVQYWEPAKWVAKLRELKTDDNLLLLCTDMDSGHGGKSGRFK SYEGVALEYAFFIALAQGTLPGKAAV >gi|289777623|gb|GG745508.1| GENE 610 697568 - 698227 812 219 aa, chain - ## HITS:1 COG:exoX KEGG:ns NR:ns ## COG: exoX COG0847 # Protein_GI_number: 16129797 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 1 217 1 217 220 412 87.0 1e-115 MLRVIDTETCGLQGGIVEIASVDIVDGRITNPMSHLVRPDRPITPQAMAIHRITEEMVAD KPWIEEIIPHYLGSPWYVAHNASFDRRVLPEMSGEWICTMKLARRLWPGIKYSNMGLYKS RKLNVATPPGLHHHRALYDCYITAALLLDIINVSGWTPDEMADITGRPALLTTFTFGKYR GKAVAEIAENDPGYLRWLFNNLDRMSPELRLTLKHYLGE >gi|289777623|gb|GG745508.1| GENE 611 698306 - 698536 311 76 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1750 NR:ns ## KEGG: Kvar_1750 # Name: not_defined # Def: DNA polymerase II subunit beta # Organism: K.variicola # Pathway: Purine metabolism [PATH:kva00230]; Pyrimidine metabolism [PATH:kva00240]; Metabolic pathways [PATH:kva01100]; DNA replication [PATH:kva03030]; Mismatch repair [PATH:kva03430]; Homologous recombination [PATH:kva03440] # 1 76 1 76 76 132 100.0 5e-30 MERNLAKISQAEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERLIAHR LASVSLSRLPWEPKQK >gi|289777623|gb|GG745508.1| GENE 612 698650 - 699024 434 124 aa, chain + ## HITS:1 COG:yobA KEGG:ns NR:ns ## COG: yobA COG2372 # Protein_GI_number: 16129794 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Escherichia coli K12 # 6 124 5 124 124 114 52.0 5e-26 MRLLAGRALRLSVAFAGILTAAGAFAHAHLQQQIPAAGAQLTAPPQTLTLSFSEGIEPAF SGVTVTGPQQHAVAAGKLTRSADNPAQVTLPLAETLPPGEYTVAWHVVSVDGHKTKGQYT FSVK >gi|289777623|gb|GG745508.1| GENE 613 699028 - 699897 1005 289 aa, chain + ## HITS:1 COG:STM1874 KEGG:ns NR:ns ## COG: STM1874 COG1276 # Protein_GI_number: 16765216 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Salmonella typhimurium LT2 # 1 289 2 291 291 262 54.0 5e-70 MLTGLYITLRFGHFITLMLAFGCVLYGAWWAPVPLRRVLMHRFYPLLRPLMLIGALSTVA LYLLQGGIMGEGWADVWQPAVWQAVAGTRFGGVWIWQILLALTALAVVWIRPHHGARQLM ALLAAQLLLSAGVGHAAMHDGLLGALQRTNHAVHLFCVASWFGGLLPFIYCLHLAQGRWR QAAIYTMARFSRYGHLAVAGTLASGVVNALLIQGAVIGTSPWGRMLLIKCALVAGMVVIA LVNRYVLVPRMSASGSRAESLILRTTQAEIGLGALALLAVSLFATWEPY >gi|289777623|gb|GG745508.1| GENE 614 699914 - 700252 281 112 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1753 NR:ns ## KEGG: Kvar_1753 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 189 100.0 4e-47 MKKIVLTMLLLASSGAALAAPQIITVSRFEVGKESWAFNREEVMLTCRPGNALYAINPST LVQYPLNDVAEQQVKAGKTTAQPISVIQIDDPQHPGQKMSLAPFIERAQKLC >gi|289777623|gb|GG745508.1| GENE 615 700897 - 701040 194 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKTEIFLLIILAVILLGCVWFIFSDEIWLLLCYLESKIYPTFSVPE >gi|289777623|gb|GG745508.1| GENE 616 701144 - 702103 857 319 aa, chain - ## HITS:1 COG:ECs0963 KEGG:ns NR:ns ## COG: ECs0963 COG2990 # Protein_GI_number: 15830217 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 25 309 41 324 330 189 37.0 5e-48 MTDNSLHSTSVLAPRSHLIADLVMGRLIPAPIWRQKNFRLKFLLRTALFYSPTKAMLESL SARDDFNQLLTAQATLPGKVHRQYLTRDLNAWQRAMAVISHYRYIDTLQGSLLAHAMTAV SEVPLLTLNGKDDSPFTLSASSAGKAEREGETTLWLRDGDHTLLASATFSVTWDGEAWQL VIGGLQGPRRHVSHEVIKQATRACFGLFPKRLLLEFIWLLAARSAIESIYGVSDNGHVFR ALRYRLSKGRHFHASYDEFWQSIDGKPESAWRWRLPQRLERKSLESIASKKRAEYRRRFQ LLDQLAEQVDILTQPRHGV >gi|289777623|gb|GG745508.1| GENE 617 702269 - 702922 512 217 aa, chain + ## HITS:1 COG:STM1853 KEGG:ns NR:ns ## COG: STM1853 COG0639 # Protein_GI_number: 16765194 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Salmonella typhimurium LT2 # 1 214 7 216 216 265 61.0 7e-71 MYQRINGSDWRNIWLMGDLHGCFALLMGRLRQLRFDPWADLLISVGDLIDRGPQSADCLG LLRCRWFRAVRGNHEQMALEALESGDMALWQMNGGDWYGRGTAQQRAEADRLLARCQRLP LIIEVGCADARHVIAHADYPAPVYRWQQPVDPQRVLWSRHRLSEHLAGRHGAIAGADHFW FGHTPLRTPYERDNQHYIDTGAVFGGTLTLVALQSAG >gi|289777623|gb|GG745508.1| GENE 618 702919 - 703110 195 63 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1828 NR:ns ## KEGG: Kvar_1828 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 63 1 63 63 123 100.0 2e-27 MFALVLFICYLDGGCEDIVVDVYREETQCLVAMEDQRIRHGGCYPIEDFIDGFWQPASEY SDF >gi|289777623|gb|GG745508.1| GENE 619 703208 - 703516 262 102 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1829 NR:ns ## KEGG: Kvar_1829 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 24 102 1 79 79 159 100.0 3e-38 MTTLKNDGLNWSYHNSAEKWGEAMSKTNVRIGAFEIDDAELHGEHQGERTLSIPCKSDPD LCMQLDAWDADTSVPAILNGEHSVLYRKHYDRQSDAWVMRLA >gi|289777623|gb|GG745508.1| GENE 620 703563 - 704951 1478 462 aa, chain - ## HITS:1 COG:yebU_1 KEGG:ns NR:ns ## COG: yebU_1 COG0144 # Protein_GI_number: 16129788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 368 18 385 385 624 82.0 1e-178 MRAAMPAHLSFDDFIAACQRPLRRSIRVNTLKISVADFLSLVAPYGWQLTPVPWCEEGFW IERDGDDALPLGSTAEHLSGLFYIQEASSMLPVAALFADNPQPERVMDVAAAPGSKTTQI AARMGNAGGILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEAFDAILLDA PCSGEGVVRKDADALKNWSPESNLDIAATQRELIDSAFHALRPGGTLVYSTCTLNREENQ SVVQWLLSRYPQAVEILPLGDLFSGAADALTAEGFLHVFPQIYDCEGFFVARLRKTAAID PLPAPGYKVGKFPFTPLKSREAAAVTAAASAVGLVWDAGHTLWQRDKELWLFPQAMEPLF GQVRFSRIGVRLAEVHNKGYRWQHEAVIAFAAPQRAFELTQEEAEEWYRGRDVYPQTAPQ QDEAIVTFQGVPLGLAKRVGSRLKNSYPRELVRDGKLFAGKV >gi|289777623|gb|GG745508.1| GENE 621 705126 - 707759 3525 877 aa, chain - ## HITS:1 COG:ECs2544 KEGG:ns NR:ns ## COG: ECs2544 COG3008 # Protein_GI_number: 15831798 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli O157:H7 # 1 877 3 879 879 1457 81.0 0 MSQESPASQTEARIKTKRRISPFWLLPVIALLIAAWLIWTSFDDRGSTITIDFQSANGIV PGRTPIRYQGVEVGTVQDISLSKDLSKIEVSASIKRDMKDALRKETQFWLVTPKASLAGV SGLDALVGGNYIGMMPGKGEPEDHFVALDTQPKYRINNGELMIHLQAPDLGSLNSGSLVY FRKIPVGRVYDFTLNANNQGVTIDVLIERRFTNLVKKGSRFWNVSGIKADVGLSGAKVQL ENLSALVNGAIAFDSPADSQVAAQNDDYHLYEDLAHSQRGVLVTLDLPDGDGLKAGSTPL VYQGLEVGQLSKLNLNPGGKVTGEMTVDPSVVTLLREKTLIQMKKPKISLDNPSVSALLT GNTFELVPGEGEPRNHFSVMPADKALLEEPNVATVTLSAPESYGIDGGQPLVLHGVKVGQ VLERKLTAKGVTFQVAIAPEYRDLIRGDSKFVVNSRLDVKVGLDGVQVLGASASEWVNGG IRVIPGEKGEMQSSYPLYANLEKAQENSLSEVPTTTLSLSAETLPDVQAGSVVLYRKFAV GEIIAVKPRKDAFDIDLHIKPEYRYLLTNNSVFWAEGGAKVKLDGNGLTVQASPLARAIK GAISFDNLNGSSANARLNNKRILYASETAARAVGGQITLHAFDAGKMAAGMPIRYLGIDI GQIQSLELITAKNEVQAKAVLYPEYVGTFARAGTRFSVITPQISAAGVEHLDTLFQSYIN VEPGRGPARRDFEIQDTTISDSRYIDGLNIVVEAPEAGSLGIGTPVLFRGLEVGTVTGLS LGSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYSLDFGLVGGVVKTGTFNQFIRGGIAF ATPPGTPLAPKAQDGKHFLLQESEPKEWREWGTALPQ >gi|289777623|gb|GG745508.1| GENE 622 707728 - 709011 1021 427 aa, chain - ## HITS:1 COG:STM1848 KEGG:ns NR:ns ## COG: STM1848 COG2995 # Protein_GI_number: 16765189 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 656 78.0 0 MPIKTPTIKPAKKLVVHAVSTPLPYAHYQRCTQCDMLFRLPVLKRNQSAWCPRCNAKVRD GRDWSLTRLGSMAVAMLLLMPFAWSEPLLRLHLLGVRIDANVLQGIWQMTAQGDPLTAAM VLFCAVVAPVLLVVSISYLWLGNVLGMNLRPVLLMLGKLKEWVMLDIYLVGIGVASIKVQ DYAFLQPGIGLVAFISLTLLSILTLIHMNVEELWERFYPERPATRADNNLQVCTGCHYTG YRDARGRCRRCHSPLHHRRPQSLQRSWAALIASLIFLLPANLLPISIIYVNGARQDDTIL SGIISLASSNIAIAGVVFIASILVPFTKVIVLFTLLVSIQFKCEQGLRTRILLLRLITWI GRWSMLDLFVISLTMSLINRDQLLAFTMGPAAVYFGGAVILTILAVEWLDSRLLWDAHES GIARFAD >gi|289777623|gb|GG745508.1| GENE 623 709087 - 709641 295 184 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 22 163 6 147 165 118 42 1e-24 MLILVGCTYQAVRQPSEDIMSKTEFYADLNRDFQALMAGETSFLAMIANTSALLFERLSE VNWAGFYLLEGDTLVLGPFQGKLACVRIPVGRGVCGAAVAQAQVQRVEDVHAFDGHIACD AASNSEIVFPLRVNDQIIGVLDIDSTAYGRFTAEDEQGLRTLVEQLEKLIAATDYQKIFT RVVG >gi|289777623|gb|GG745508.1| GENE 624 709739 - 710416 633 225 aa, chain + ## HITS:1 COG:proQm KEGG:ns NR:ns ## COG: proQm COG3109 # Protein_GI_number: 16132234 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Escherichia coli K12 # 1 225 1 232 232 320 83.0 1e-87 MENQPKLNSSKEVIAFLAERFPQCFSAEGEARPLKIGIFQDLVERVGGEMNLSKTQLRAA LRLYTSSWRYLYGVKAGAIRVDLDGNPCGELEEQHIAHARQQLEEAKARVQTQRAAQQAK KREAAAAAGQQDEGVRRERKPRPQQPRRKEGAEQRKPRPVAAKAPREERHTPVSDVSVLT VGQALKVKAGNNAMDATVLEITKDGVRVQLTSGMSMIVRAEHLVF >gi|289777623|gb|GG745508.1| GENE 625 710535 - 712484 2690 649 aa, chain + ## HITS:1 COG:STM1845 KEGG:ns NR:ns ## COG: STM1845 COG0793 # Protein_GI_number: 16765186 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Salmonella typhimurium LT2 # 1 649 34 682 682 1174 91.0 0 MLKEEPQHATVSERVTSRFTRSHYRQFDLDNAFSAKIFDRYLNLLDYSHNVLLASDVAKF AAKKDQIGDELRTGKLDVFYDLYNLAQQRRFERYQYALKVLERPMDFTGNDNFNLDRSKA PWPKDEAELNTLWDAKVKFDQLSLKLAGKDDKEIRDTLTRRYKFAIRRLAQTNSEDVFSL AMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSLVAGGPAAKS KAISVGDRIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGAKTRIVTL TRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSIVIDLR SNGGGALTEAVSLSGLFIPSGPVVQVRDNNGKVREDSDNDGVVYYKGPLVVLVDRFSASA SEIFAAAMQDYGRALIVGEPTFGKGTVQQYRSLNRIYDQMLRPDWPALGSVQYTIQKFYR INGGSTQRKGVTPDIMMPTGNEDRETGEQYEDNALPWDSINAATYVKSGDLTPFGPELLK RHDERIAQDPEFQYIMKDIARYNAMKDKRNIVSLNYAQREKENEEDDAIRLARINDRLKR EGKPLLKKLDDLPKDYQEPDPYLDETVHIAVDLAHLEKARPAVEPPASK >gi|289777623|gb|GG745508.1| GENE 626 712723 - 713604 1145 293 aa, chain + ## HITS:1 COG:STM1844 KEGG:ns NR:ns ## COG: STM1844 COG0501 # Protein_GI_number: 16765185 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Salmonella typhimurium LT2 # 1 293 2 293 293 512 93.0 1e-145 MRIALFLLTNLAVMVVFGLVLSLTGIQSSSMTGLLIMALLFGFGGSIVSLMMSKWMALKS VGGEVIEQPRNETERWLMHTVAQQAQQAGIAMPQVAIYHAPDINAFATGARRDASLVAVS TGLLQNMSRDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRVIAQIAAGFLGGN REDEGESSNGNPLIYFAVATVLELVFGILASIITMWFSRHREFHADAGSARLVGREKMIA ALQRLKTSYEPQEASSMMAFCINGKAKSMSELFMTHPPLDKRIEALRSGEYLK >gi|289777623|gb|GG745508.1| GENE 627 713674 - 715044 1811 456 aa, chain - ## HITS:1 COG:yebQ KEGG:ns NR:ns ## COG: yebQ COG0477 # Protein_GI_number: 16129782 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 455 38 492 494 626 79.0 1e-179 MDKNSSDGVPLPQRYGAILTIVLGLTMAVLDGAIANVALPTIASDLNASPAASIWIVNAY QIAIVIALLPLSFLGDMVGYRRIYKIGLMVFIFTSLACALSRSLDMLTFARVAQGLGGAA LMSVNTALIRLIYPQRFLGRGMGINSFVVAVSSAAGPTIAAAILSLASWQWLFLINVPLG IVAFVLAMRFLPPNSARSKIIRFDLPSAIMNALTFGLLITALSGFAQGQSVQLVLAEVAA MLVVGFFFVRRQLSMPVPLLPVDLLRIPLFSLSICTSICSFCAQMLAMVSLPFFLQTMMG RSEVETGLLLTPWPLATMVMAPLAGYLIEKCHAGLLGAIGLLVMACGLFGLALLPESPSD LDIIWRMALCGAGFGLFQSPNNHTIVASAPSHRSGGASGMLGTARLLGQSTGAALVALLF NLLGNSGTHTALLLAGILATVAALISGLRVTQPRAA >gi|289777623|gb|GG745508.1| GENE 628 715222 - 716013 1049 263 aa, chain + ## HITS:1 COG:kdgR KEGG:ns NR:ns ## COG: kdgR COG1414 # Protein_GI_number: 16129781 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 263 1 263 263 469 95.0 1e-132 MAGADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGY VAQEGESEKYSLTLKLFELGARALQNVDLVRSADIQMRELSRLTKETIHLGALDEDSIVY IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRSEVEQILEGVEYKRSTERTITST EALLKVLDGVREQGYGEDNEEQEEGLRCIGVPVFDRFGVVIAGLSISFPTLRFSEERLHE YVAMLHQAARKISEQMGYNDYPF >gi|289777623|gb|GG745508.1| GENE 629 716072 - 716311 338 79 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1839 NR:ns ## KEGG: Kvar_1839 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 79 1 79 79 134 100.0 1e-30 MRLIIRTIVVVAILWIGVLLSGYGVLFHSEENVGGLGLKCQYLTARGVSTALYVHSNSGV IGVSNCPILRKSATVVDNG >gi|289777623|gb|GG745508.1| GENE 630 716689 - 716979 258 96 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1841 NR:ns ## KEGG: Kvar_1841 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 96 1 96 96 144 100.0 1e-33 MSELLNPGILNLASLAVSVALLLVGLLLWFFVNRASSRANEQIELLQALLDQQKRQNALL RRLCEANAPEKEDVAEPTVAGKAKGEDEFIRLVAER >gi|289777623|gb|GG745508.1| GENE 631 717728 - 717937 271 69 aa, chain + ## HITS:1 COG:ECs2533 KEGG:ns NR:ns ## COG: ECs2533 COG1278 # Protein_GI_number: 15831787 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 100.0 5e-28 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG PAAVNVTAI >gi|289777623|gb|GG745508.1| GENE 632 718143 - 719873 2041 576 aa, chain + ## HITS:1 COG:STM1836 KEGG:ns NR:ns ## COG: STM1836 COG0768 # Protein_GI_number: 16765177 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 6 575 11 580 581 962 82.0 0 MKSAASFTPIRFGLLCVAILGCLGLLLARVGWLQIVSPDNLVKQEDMRSLREEPVAVERG MISDREGRPLAVSVPVSAIWIDPQTTMEKGGVGYGPRWQAMAEALHLNLGELAQRVQSHP HARFLYLARQINPEQAEWIDKLHLPGVYLRDESRRFYPAGHVAANLLGFTNVDNQGIEGV EKSFNAQLTGKPGRRLVRKDKHGNVIENITEVPPVPAHNLQLSIDERLQTVTEDALDNAV RWNKAESGAAVLIKIDTGEILAMASYPDFNPNNRDSATLDDFRNRAISDTFEPGSTVKPL VIMTALQQGIVQPDSVVDTHPFVLDGHRIRDVGYYPELSLTGILQKSSDTGVSHLSLAMP VQHLLDTYQAFGFGEPTGLGLTGESAGLMPHRRYWGQLDRATFAFGYGLMVTPLQLAHVY ATIGGFGIERPLSITRIDPPVIGTRVMPENIVHSVEHMMESVALPGGGGTKAAVRDYRVA VKTGTAKKIGPDGKYIDKYVAYTAGVAPASRPQFALVVVMNDPSNGSYYGGAVSAPVFSQ IMGDVLRLENVMPDGMPQGAENLIVMHDSHPLAPAL >gi|289777623|gb|GG745508.1| GENE 633 719934 - 720728 723 264 aa, chain + ## HITS:1 COG:rrmA KEGG:ns NR:ns ## COG: rrmA COG0500 # Protein_GI_number: 16129776 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 262 1 267 269 387 72.0 1e-107 MSYSCPLCHAPLSRGDNHYSCPQRHQFDLAKEGYVNLLPVQFKRSRDPGDSAEMMQARRA FLDAGHYQPLREAIAERLRHHAPADLLDIGCGEGYYTHAFATIASHSWGLDVSKPAIRAA AKRYPQVSFCVASSQRLPFSDNSFDAVVRIYAPCNAEELARVVRPGGWVITATPGPRHLL ELKGLIYDEVRLHELKTEAMPGFRLDAQQQLAYPMTLTGSEAQALLQMTPFAWRAKPEVH AALRQQATFGCQTDFMIHCWQREA >gi|289777623|gb|GG745508.1| GENE 634 720732 - 721298 759 188 aa, chain - ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 19 206 206 276 80.0 2e-74 MNLSATILLAFGMSMDAFAASIGKGATLHKPKFSEAVRTGLIFGVIETLTPLVGWGLGML ASQFVLEWNHWIAFILLVFLGGRMIVEGVRGDSDEACDAPRRHGFWLLVTTAFATSLDAM AVGVGLAFLQVSIVTTALAIGCATFLMSTLGIMVGRFIGPLLGKRAEILGGIVLIGIGSE ILWSHFAG >gi|289777623|gb|GG745508.1| GENE 635 721718 - 722176 481 152 aa, chain - ## HITS:1 COG:STM1833 KEGG:ns NR:ns ## COG: STM1833 COG4811 # Protein_GI_number: 16765174 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 152 1 152 156 231 84.0 4e-61 MTFTDLVIILFILALLAYAVYDQFIMPRRNGPVLLAIPLLRRSRVDGLIFVGLTAILIYN NITQHGTPITTWLLSALALMGLYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDG VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ >gi|289777623|gb|GG745508.1| GENE 636 722239 - 723090 1121 283 aa, chain - ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 283 4 286 286 522 92.0 1e-148 MVDMTKNTTEKKLTQSDIRGVFIRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNDA RKQAIKRHLEFFNTHPYVAAPVLGVTLAMEEQRANGAEIDDGAINGIKVGLMGPLAGVGD PIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNAVRLLTRYYGVAYGYRKGVDIVKDM GGGFLQKLTEGASILGLFVMGALVNKWTHVNIPMVVSKITGSDGQVHVTTVQTILDQLMP GLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYAVGLLGL >gi|289777623|gb|GG745508.1| GENE 637 723103 - 723903 1011 266 aa, chain - ## HITS:1 COG:ECs2528 KEGG:ns NR:ns ## COG: ECs2528 COG3715 # Protein_GI_number: 15831782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 377 93.0 1e-104 MEITLLQIVLVFIVACIAGMESVLDEFQFHRPLVACTLIGAVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTVLVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAF QHAADKAAENGNLTALSWLHVSSLFLQAMRIAIPAVIVAISVGTSEVQGLLNAIPEVVTS GLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAILYIQ LSPKYNRVAGAPAQAAGNNDLDNELD >gi|289777623|gb|GG745508.1| GENE 638 723960 - 724931 1178 323 aa, chain - ## HITS:1 COG:ECs2527_2 KEGG:ns NR:ns ## COG: ECs2527_2 COG3444 # Protein_GI_number: 15831781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 158 323 1 166 166 299 93.0 4e-81 MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTSK GVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETFMARDDDPSFDELVALAVE TGSEGVKALKAKPVEKAAPAPAPAAAPKAAAPAKPMGPNDYMVIGLARIDDRLIHGQVAT RWTKETNVTRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPMYAGQRV MLLFTNPTDVERIVEGGVKITSVNIGGMAFRQGKTQVNNAISVDAKDIEAFNKLNARGIE LEARKVSTDPKLKMMDLIAKVDK >gi|289777623|gb|GG745508.1| GENE 639 725390 - 726937 2082 515 aa, chain + ## HITS:1 COG:STM1828_2 KEGG:ns NR:ns ## COG: STM1828_2 COG1253 # Protein_GI_number: 16765169 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Salmonella typhimurium LT2 # 227 515 1 288 288 446 82.0 1e-125 MDPSIWAGLLTLIVLEIVLGIDNLVFIAILADKLPPKQRDKARLIGLSLALVMRLGLLSV ISWMVTLTKPLITIADFSFSGRDLIMLLGGIFLLFKATTELHERLENRQHDSGHGKGYAS FWVVVLQIVVLDAVFSLDAVITAVGMVNHLPVMMAAVVIAMIMMLLASKPLTRFVNQHPT VVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEFFNQVARRNFVRHQSTLPL RARTADAILRLMGGRKQTSVSHDADSPAAIPVPEGAFAEEERYMINGVLTLAQRSLRGIM TPRGEISWVDAEQSDDEIRRQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEAGENVA ALASASPAIVVPETLDPINLLGVLRRARGSFVIVTNEFGMVQGLVTPLDVLEAIAGEFPD ADETPEIVIDGDGWLIKGSTDLHALQQALGLDALVNEDEDIATVAGLVIAVNGHIPRIGD TVSLPPLQFTVVEANDYRVDLVRAVVTRPLSDEEE >gi|289777623|gb|GG745508.1| GENE 640 726971 - 728542 1538 523 aa, chain - ## HITS:1 COG:STM1827_2 KEGG:ns NR:ns ## COG: STM1827_2 COG2200 # Protein_GI_number: 16765168 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 261 512 1 252 272 357 68.0 4e-98 MQTAQKVITAYRRKRIIVCLLVALLTLGTTLAIRFISQRSVNEEYIRTAASQRVTALDNI LRPLSAERATLLSLVDKPCMDIHLTLRKMAASLQTVRSVALVASGMIYCSSIFGQRQADL HQLQPALPARHPLLLFSTDNSLLKGTPVLIQWYPASESGFDGVMLIVNIELLGTLILKEK SPLISDVSLQVGDHYFISGLGLIDKAHAPQASVIYRQRSTEFPFTININGPGAATIALEE LPGELPLALIFSLLMTGIAWLATAGRMSFSREISLGITAREFTLWCQPLQDARSGRCCGV EILLRWNNPRRGEISPEVFIPIAEGDNLIIPLTRYVIAETARRLDAFPSEPHFHIAINVA ARHFAHGLLLHDLHNYWFSVNPIQQLVVELTERDVLQDGDQHMAEHLHLKGVQLAIDDFG TGNSSLSWLEKLRPDVLKIDRSFTSSVGIDSVNATVTDIIIALADRLNIVTVAEGVETLE QESYLRGHGVDVLQGFYYARPMPIEAFPAWLADREGQKSEGGE >gi|289777623|gb|GG745508.1| GENE 641 728725 - 730089 1873 454 aa, chain - ## HITS:1 COG:STM1826 KEGG:ns NR:ns ## COG: STM1826 COG1760 # Protein_GI_number: 16765167 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Salmonella typhimurium LT2 # 1 454 1 454 454 848 90.0 0 MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLNAVTRVAVDVYGSLSLTGKGH HTDIAIIMGLAGNQPDTVDIDAIPAFIRDVEARGRLLLANGQHEVDFPADDGMRFRSDNL PLHENGMTIHAWAGEKEIYCKTYYSIGGGFIVDEEHFGKENANELQVPYPFKSAQEMLAY CKETGLSLSGMVMQNELALHSKKEIEDYFANVWQTMRACIDRGMNTEGVLPGPLRVPRRA SALRRLLVASDKLSSDPMNVVDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DHFIESVSPEIYIRYFMACGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGA SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMAMRRTSEPRVS LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD >gi|289777623|gb|GG745508.1| GENE 642 730252 - 730830 719 192 aa, chain - ## HITS:1 COG:STM1825 KEGG:ns NR:ns ## COG: STM1825 COG0494 # Protein_GI_number: 16765166 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 192 1 192 192 305 82.0 5e-83 MADHALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAG QVAFPGGAVDNTDATLIAAALREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIP PNLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGNDHRVWLSWYQHYFVWGMTAGI IRELALQIGARP >gi|289777623|gb|GG745508.1| GENE 643 730834 - 732189 1464 451 aa, chain - ## HITS:1 COG:STM1824 KEGG:ns NR:ns ## COG: STM1824 COG0147 # Protein_GI_number: 16765165 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Salmonella typhimurium LT2 # 2 451 5 454 454 708 78.0 0 MLSPAIITLPWRPDAAEHYFAPLSALPWAMLLHSGFADHPHNRFDILVAAPRATLLTRGE QTWVDDGETAFVSAEDPLQLLQQQLDRQPFTPQPHDDLPFLGGALGLFGYDLGRRFERLP AHAQADIALADMAVGIYDWALIVDHQRQQISLLSYDDPQQRLQWLQAQSRPAMKPFALTS AWQSNMSRQQYGEKFRQVQAYLHSGDCYQVNLAQRFQARYVGDEWQAFRQLNVANRAPFS AFIRLEEGAILSLSPERFIQLRQGEIQTRPIKGTLPRLDSPQEDARQAEKLANSPKDRAE NLMIVDLMRNDIGRVAVPGSVRVPELFVVEPFPAVHHLVSTITARLPATLHASDLLRAAF PGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSYCGNMDTSITIRTLTAWQGQLYCS AGGGIVADSEEDAEYQETFDKVNRILHQLEN >gi|289777623|gb|GG745508.1| GENE 644 732278 - 732481 399 67 aa, chain + ## HITS:1 COG:ECs2520 KEGG:ns NR:ns ## COG: ECs2520 COG3140 # Protein_GI_number: 15831774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 59 1 59 59 77 91.0 8e-15 MFAGLPSLSHEQQQKAVERIHELMAQGMSSGQAIALVAEELRATHTGEQIVARFEDEDED QDEDEDD >gi|289777623|gb|GG745508.1| GENE 645 732482 - 732826 586 114 aa, chain - ## HITS:1 COG:yoaB KEGG:ns NR:ns ## COG: yoaB COG0251 # Protein_GI_number: 16129763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 114 17 130 130 193 91.0 6e-50 MTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLAQIDAVLEKQGSDKSRI LDATIFLADKSDFAAMNKAWDAWVVAGHAPVRCTVEATLMNPQYKVEIKIIAAV >gi|289777623|gb|GG745508.1| GENE 646 732958 - 734868 2417 636 aa, chain + ## HITS:1 COG:STM1821 KEGG:ns NR:ns ## COG: STM1821 COG1199 # Protein_GI_number: 16765162 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Salmonella typhimurium LT2 # 1 635 1 635 636 1177 93.0 0 MIDDFAADGQLAKAIPGFKPREPQRQMAKAVSEAIEASRPLVVEAGTGTGKTYAYLAPAL RAKKKVIISTGSKALQDQLYSRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGG DLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPLVTSTNDNCLGSDCPLYKDCF VVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLA DSHIQRALLLLDDALELCYDVAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYW YECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLSVNDDLHHFTARLGIDEAQSL LLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKL PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPEAVITLKQGVGRLIRDIDDRGVLVICDNR LVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR >gi|289777623|gb|GG745508.1| GENE 647 735014 - 735709 241 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 5 199 36 235 832 97 31 2e-18 MRILAIDTATEACSAALWNDGTLSAHFEICPREHTQRILPLVQEVLTESGATLTELDALA FGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLATMAQGAWRKTGATRVLAAIDARMG EVYWAEYQRDEQGVWHGEETEAVLKPEAVAERLAQLSGEWATVGTGWQAWPDLAKASGLT LSSGEIELPAAEDMLPLACYLLAAGKTVAVEKAEPVYLRNEVAWKKLPGRE >gi|289777623|gb|GG745508.1| GENE 648 735748 - 736329 823 193 aa, chain + ## HITS:1 COG:STM1819 KEGG:ns NR:ns ## COG: STM1819 COG3065 # Protein_GI_number: 16765160 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 306 81.0 1e-83 MAGQKQGVRWLLAAAVAVALSGCVSVPDAIKGTSPTPQQDLVRVMNAPQLYVGQEARFGG KVVNVQNQQGKTRLEIATVPLDSGARPVLGEPSRGRIYADVNGFLDPVDYRGQLVTVVGP IAGVVDGKVGSTPYKFMLMNAIGYKRWNVVQQVVMPPQPIDPWMLGPRPWGYGYGGWGWY NPGPAEVRNVVTE >gi|289777623|gb|GG745508.1| GENE 649 736535 - 738220 2292 561 aa, chain + ## HITS:1 COG:STM1818 KEGG:ns NR:ns ## COG: STM1818 COG0318 # Protein_GI_number: 16765159 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 1 561 1 561 561 1100 94.0 0 MKKVWLNRYPADVPAEINPDRYQSLVELFEHATTRYADQPAFINMGEVMTYRKLEERSRA FAAYLQEGLGLQKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS GAAAIVIVSNFAHTLEKVVAKTQVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL PDAISFRSALQHGYRMQYVKPEIVAEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA TYGPLLHRGKEFVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF TAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQAVAERWVKLTGQYLLEGYGLT ECSPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGQPGELCIKGPQVMLGYWQ RPDATDEIIKDGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGV LEVAAIGVPSGSSGEAVKIFVVKKEAALTEEALITFCRRHLTGYKVPKLVEFRDELPKSN VGKILRRELRDEARAKVDNKG >gi|289777623|gb|GG745508.1| GENE 650 738289 - 739416 1409 375 aa, chain + ## HITS:1 COG:rnd KEGG:ns NR:ns ## COG: rnd COG0349 # Protein_GI_number: 16129758 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Escherichia coli K12 # 1 375 1 375 375 597 79.0 1e-170 MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGTQVSLIDPLTI SDWAPMRELLLNQDVTKYLHAGSEDLEVFLNAFSLMPQPLIDTQILAAFCGRPMSWGFAS MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL DECRLMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM PGYRKAFKDIKALVQEVSADKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE LMAGRLKSLLNDYPR >gi|289777623|gb|GG745508.1| GENE 651 739493 - 739762 435 89 aa, chain - ## HITS:1 COG:STM1816 KEGG:ns NR:ns ## COG: STM1816 COG0851 # Protein_GI_number: 16765157 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 145 94.0 2e-35 MALLDFFLSRKKNTANIAKERLQIIVAERRRGDAEPHYLPQLRKDILEVICKYVQIDPEM VSVQLEQRDGDISILELNVTLPETEESKP >gi|289777623|gb|GG745508.1| GENE 652 739766 - 740578 1025 270 aa, chain - ## HITS:1 COG:STM1815 KEGG:ns NR:ns ## COG: STM1815 COG2894 # Protein_GI_number: 16765156 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Salmonella typhimurium LT2 # 1 270 1 270 270 490 96.0 1e-139 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVDKVLEELKKMDFDFIVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLL TRYNPGRVNKGDMLSMEDVLEILRINLVGVIPEDQSVLRASNQGEPVILDAASDAGKAYA DTVERLLGEERPFRFIEEEKKGFLKRLFGG >gi|289777623|gb|GG745508.1| GENE 653 740602 - 741303 330 233 aa, chain - ## HITS:1 COG:STM1814 KEGG:ns NR:ns ## COG: STM1814 COG0850 # Protein_GI_number: 16765155 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Salmonella typhimurium LT2 # 1 233 1 235 235 360 80.0 1e-99 MSNTPIELKGSSFTLSVVHLHDANPEVIRQALEDKIAQAPAFLRHAPVVVNIASVEEEVE WRAINEAIAATGLRIMGVSGCKIPRLKTEIDRAGIPLLTEGKEKAPRPAPSEPTPPPPPV ANQITKTRLIDQPVRSGQRIYAPHCDLIVTNHVSAGAELIADGNIHVYGMMRGRALAGAG GDRDAQIFCTHLAAELVSIAGEYWLSDNIPAEFYGKAARLRLGESALTVQPLN >gi|289777623|gb|GG745508.1| GENE 654 741430 - 741711 311 93 aa, chain + ## HITS:1 COG:ECs1674 KEGG:ns NR:ns ## COG: ECs1674 COG3100 # Protein_GI_number: 15830928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 93 12 104 108 144 79.0 3e-35 MFCVIYRSTKREQTYLYVEKKDDFSRVPDELMRGFGTPQMAMLLPLDGRKKLVNADLEKV IQALSEQGYYLQLPPPSENLLKKHLAEQGKQSD >gi|289777623|gb|GG745508.1| GENE 655 741728 - 742387 915 219 aa, chain + ## HITS:1 COG:ycgM KEGG:ns NR:ns ## COG: ycgM COG0179 # Protein_GI_number: 16129143 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Escherichia coli K12 # 1 219 1 219 219 393 86.0 1e-109 MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSATPEEPVLFIKPETALCDLRQPLVL PEGLGSVHHEVELAVLIGSTLRQATEEHVQKGIAGYGVALDLTLRDLQAKMKKAGQPWEK AKGFDNASPISGFIPAAEFHGDPQNTPLSLKINGEVRQQGTTADMIHKIVPLIAYMSRFF TLKAGDVILTGTPEGVGPLHSGDELEVGFNGLSLATRVL >gi|289777623|gb|GG745508.1| GENE 656 742482 - 742928 674 148 aa, chain + ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 148 11 158 158 278 91.0 4e-75 MSEQPFWQQKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQC RNYERRFEYEPDCIKLTRENLPTFEWLPPTCAYRLLAEGKSLPAWHPLLTGSKAAMHGER ISVRHIAVPESTVVDWQDHILNLPDRAR >gi|289777623|gb|GG745508.1| GENE 657 742937 - 743281 439 114 aa, chain - ## HITS:1 COG:STM1808 KEGG:ns NR:ns ## COG: STM1808 COG3615 # Protein_GI_number: 16765149 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Salmonella typhimurium LT2 # 1 114 1 113 113 193 85.0 8e-50 MSSLLIPADWKVKRSTPFFTKENVPAALLSHHNTAAGVFGQLCVMEGTVTYYGFANEQAT EPEKKVVIHAGQFATSPPQYWHRVELSDDARFNIHFWVAEETDGENGLFHAKKA >gi|289777623|gb|GG745508.1| GENE 658 743432 - 743962 711 176 aa, chain - ## HITS:1 COG:STM1807 KEGG:ns NR:ns ## COG: STM1807 COG1495 # Protein_GI_number: 16765148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 285 85.0 2e-77 MLQYLNQCSRGRGAWLLMALTAFILELVALWFQHVMLLQPCVMCIYERCALFGIMGAGLV GAIAPKTPLRYVAMVIWLYSAIRGLQLAWEHTMIQLHPSPFQTCDFAARFPTWLPLDKWL PQVFVASGDCSVRQWQFLSLEMPQWLVGIFAAYLLVAILVIIAQPFKAKKRDLFGR >gi|289777623|gb|GG745508.1| GENE 659 744091 - 745641 2119 516 aa, chain - ## HITS:1 COG:STM1806 KEGG:ns NR:ns ## COG: STM1806 COG3067 # Protein_GI_number: 16765147 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 512 1 512 514 791 83.0 0 MEISYGRALWRNFLGQSPDWYKLALIIFLIVNPLVFAVAPFVAGWLLVVEFIFTLAMALK CYPLLPGGLLAIEALLIGMTSPAHVREEIAGNLEVLLLLIFMVAGIYFMKQLLLFVFTRL LLGIRSKMLLSLAFCLAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASARPDDNDLLD DSHIEQHYREVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGEFFI RMAPVTVPVMVCGLLTCLLVEKYRLFGYGEPLPPAVRKVLQDFDDRSRAQRSRQEQLRLL AQAVIGVWLIVALAFHLAEVGLIGLSVIILATTFSGVTDEHAIGKAFTEALPFTALLTVF FAIVAVIIDQQLFTPVIEFVLQASPHAQLSLFYLFNGLLSSISDNVFVGTVYINEAKTAL EHGVISLPQFEMLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALP YTLVLTLVGLLCVEFTLMPVTNWLLAHGWVTTPTLP >gi|289777623|gb|GG745508.1| GENE 660 745890 - 746609 1079 239 aa, chain + ## HITS:1 COG:STM1805 KEGG:ns NR:ns ## COG: STM1805 COG2186 # Protein_GI_number: 16765146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 455 90.0 1e-128 MVIKAQSPAGFAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHDSVPQLIDNLLSVRTNISTIFIRTAFRQH PDKALAVLDSAREVEDHADAFADLDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYF SSPEARSLALGFYHQLAKVCEGGLHDQVYELVRRYGHDSGEIWHRMQKSLPGDLAMNMR >gi|289777623|gb|GG745508.1| GENE 661 746684 - 748216 2216 510 aa, chain - ## HITS:1 COG:ycgB KEGG:ns NR:ns ## COG: ycgB COG2719 # Protein_GI_number: 16129151 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 506 1 506 510 993 94.0 0 MATIDSMNRDTTRLSDGPDWTFELLETYLAEVDRVAKLYRLDTYPHQIEVITSEQMMDAY SSVGMPINYPHWSFGKKFIETEQAYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM AHACYGHNSFFKNNYLFRSWTDASSIIDYLIFARKYITECEERYGVDEVEKLLDSCHALM NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKAIESARRYPSEPQ ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF PDIAGSDWLETLHFAMRDFKDESFISQFLSPKIMRDFRFFTVLDDDHNNYLEISAIHNEE GYREIRNKLSAQYNLSNLEPNIQVWNVDLRGDRSLTLRYVPHNRVPLDKGRREVLKHVHR LWGFDVLLEQQNADGSIELLDRCPARPNAL >gi|289777623|gb|GG745508.1| GENE 662 748538 - 749836 1701 432 aa, chain + ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 802 89.0 0 MRVVILGSGVVGVASAWYLSQAGHEVTVIDRQPGPAEETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAIGLDGTSFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK ALRDTTGIQYEGRQGGTLQLFRTAKQYENATRDIAVLEDAGVPYQLLEAKRLAEVEPALA EVSHKLTGGLRLPNDETGDCQLFTTRLAAMAEQAGVTFRFNTAVDALLQEGDRIAGVKCG DEIIKGDAYVMAFGSYSTAMLKGLVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA ITRFDQRIRVGGMAEIVGFNKALLQPRRETLEMVVRDLFPRGGHVEQATFWTGLRPMTPD GTPVVGRTAYKNLWLNTGHGTLGWTMACGSGQLISDLISGRTPAIPYDDLAVARYSPGFT PARPQHLHGAHN >gi|289777623|gb|GG745508.1| GENE 663 749846 - 750916 1444 356 aa, chain + ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 587 80.0 1e-167 MTRPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSALSGADGFALLN LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRIEQAA EGLNCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRSEII GVQNLRPGEAIGYGGLYRTSQEQRIGIVACGYADGYPRVAPSGTPVLVDGVRTTTVGRVS MDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCALAPRVPVVTL >gi|289777623|gb|GG745508.1| GENE 664 750933 - 752666 2252 577 aa, chain - ## HITS:1 COG:STM1801 KEGG:ns NR:ns ## COG: STM1801 COG3263 # Protein_GI_number: 16765142 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 932 88.0 0 MDAAAVISLFILGSVLVTCSILLSSFSSRLGIPILVIFLAIGMLAGIDGIGGIPFDNYPF AYMVSNLALAVILLDGGMRTQASSFRVALWPALSLATVGVLITSALTGMMAAWLFKLDMI EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIEMIQQHQ TGLSWMFAVHIIQQFGLGIAIGLGGGYLLLQMINRIVLPAGLYPLLALSGGIMIFAVTTT LDGSGILAVYLCGFLLGNRPIRNRHGILQNFDGLAWLAQIAMFLVLGLLVTPSDLLPIAI PALLLSMWMIFIARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLDN ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPISWPISRVGLDIHPENPWEQFVYQ LGADKWCIGAALRDLHMPPETRIAALFRNNALLHPTGSTRLREGDILCVIGREHDLPALG KMFSQSPPVALDQRFFGDFILDAEARFADVAQIYGLDGGEEFREHQQSLGEVVQQLLGAA PVVGDQVEFAGMVWTVAEKENDHVLKVGVRVAEDEAE >gi|289777623|gb|GG745508.1| GENE 665 752759 - 753673 1107 304 aa, chain - ## HITS:1 COG:ECs1688 KEGG:ns NR:ns ## COG: ECs1688 COG1619 # Protein_GI_number: 15830941 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Escherichia coli O157:H7 # 1 302 1 302 304 457 72.0 1e-128 MSQFYLVAPSGYCINQQAAARGVERLQQAGHEVAHQQVIPRRQQRFAGTEQERLADINQL AQLPGRNRIVLAVRGGYGASRLLPHIDWQGLIARQQRDPLLICGHSDFTAIQSGLLATGN VITFSGPMLAGNFGAETLDPFTEHHFWQALRQAEFTLEWPGEGPNCQVEGTLWGGNLAML TSLIGTPWLPAIRDGILVVEDINEHPFRVERMLLQLLHSGVLAAQKAVIFGSFTGSAPND YDAGYDLPQVFDYLRQQLSLPLISGLEFGHEQRTVTLPLGARARLVNQAATTTLTISGHP VLTE >gi|289777623|gb|GG745508.1| GENE 666 753849 - 754460 792 203 aa, chain + ## HITS:1 COG:STM1799 KEGG:ns NR:ns ## COG: STM1799 COG0741 # Protein_GI_number: 16765140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 203 1 203 203 360 88.0 1e-99 MKLRWLLILVVFLAGCSSKHDYTNPPWNPEVPVKRAMQWMPISEKAGAAWGVDPQLITAI IAIESGGNPAVVSKSGAVGLMQLKPSTSGRDVYRRMGWRGEPSVSELKNPERNISMGAAY LSILENGPLAGIKDPQVMRYAVVVSYANGAGALLRTFSSDRQDAIDEINDLDADEFFEHV VKKHPAPQAPRYIWKLQKALDAM >gi|289777623|gb|GG745508.1| GENE 667 754509 - 755318 499 269 aa, chain - ## HITS:1 COG:no KEGG:KPK_1990 NR:ns ## KEGG: KPK_1990 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 269 6 274 274 541 97.0 1e-152 MHLHPLLFLGGFMFIVPGIYIAIGTTIVVTRPAAQPQPHATEVSPWLLAWLTGEGTRVIQ LAMFSLLSKKYLWIPEAGQVLANGRYANQEMNVIERILFDHFEVRKPCHEDLPCSLSIAG RNLWQEQIASAGLALSPLRRGCNMLAISIPSIALGVIVVSKTFIWLDFTAYSIFSCLLMP TGCALWGGLWIEAISKTIRLDICGISHHDAHACIDALREALALKGDQEDDATAILCVAVN GPGSLPERYRDYKTLIAPMSAITSLRTED >gi|289777623|gb|GG745508.1| GENE 668 755346 - 756197 489 283 aa, chain - ## HITS:1 COG:no KEGG:KPK_1991 NR:ns ## KEGG: KPK_1991 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 283 1 283 283 542 98.0 1e-153 MNPVISYIANLHPLSFMGYYVLSTTVIYILLNIIIAKTRPAGNTTAVPAPYSISPSFLAW LRHRATRVIQLAMFRLLRKNYVTLIHSAEDIQLCANQQYAECKMTCVEKILFDHFATPKS CHQDLPLSLHVAEQNHWANDPHCSGLRLSPTHQTWNMIVIAAPSLLLIAVLVWKTLFDHQ AIIHSSVLSWLVMFMVSGLWWLWLLCITLNATRLDREGIAINILHHYIDTLKETLIADAD TLTDENADYCVAIGTTTLLPERFAEYVKIINLIQYPFCLQRLD >gi|289777623|gb|GG745508.1| GENE 669 756377 - 758497 2599 706 aa, chain - ## HITS:1 COG:PA2466 KEGG:ns NR:ns ## COG: PA2466 COG1629 # Protein_GI_number: 15597662 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 44 706 154 820 820 528 42.0 1e-149 MNVAISRKRPRLLYALVVALPLTAQAEETVVVTASPPASASAPTEGYSASTSLGATKTDQ PLITTAQSVSVVTRQQMADQGANTISQALEYTPGVYSSFGGGATRFDAISLRGYHGGDVD NLFLDGMRLMSDGGSHNVVQIDPWFIERVDVIRGPSSALYGQSVPGGVVNLTSKRPQFSQ QGHVRLTGGTQNTKGAAFDYTDAINEQWAWRLIGMTRSSDTQYDHTREERYAISPSLLWQ PDSDTSLLLRAYLQKDPSGGYHGSLPLDGTRYAHNGRKLSPSTNEGDPGDGYQRRQQIYS YEFDHQFTDVWSVYSAGSYTHTNVSLDQVYQVGWIDDSDMLARGYSGSRGSLDGWSTDNR LRADFNTGDLAHTLILGAEYHRFRNDLWTGAGGAAPLNPFTGYTAQTGHTVTYSDDNHRR YYQTGLYLQDEMVWNRWHVDVSARYDRIVSQQVSDTFGTSNRRSDDHISGRASLLYALDN GLSPYLSYSQAITPAMLPGADGKPLKPTTAEQVEAGLKFQPPGSRDLYSIAIYDLTQKDV ATRDPNIATATYIPAGKVHSQGVELEAHHQITPQLSTIASYTWNRLRFQDTRDGTDNNTP QLTPDQMASFWARYQFPAGISVGAGVRYIGKQWADDANTARLPSVTLMDAMMRADLGVWS PTLKGAYVQVNANNIGDREYISGCYGTGNCYWGAERSVMATVGYDF >gi|289777623|gb|GG745508.1| GENE 670 758759 - 760492 2282 577 aa, chain - ## HITS:1 COG:treA KEGG:ns NR:ns ## COG: treA COG1626 # Protein_GI_number: 16129160 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli K12 # 13 569 9 563 565 845 75.0 0 MTSTDAHRPAALPCTLRLAIGGALLALMSLNVQAEDGKTAPPPSPDILLGPLFNDVQSAK LFADQKTFADAIPNSDPLMILADYRMQKNQASFDLRHFVELNFTLPKENDTYVPPKGQTL RQHIDGLWPVLTRSTVEVEKWDSLLPLPKPYVVPGGRFREVYYWDSYFTMLGLAESGHWD KVEDMVANFAAEIDTWGHIPNGNRTYYLSRSQPPFFSFMVSLLATHDGDQVLKTYQPQLE KEYRYWMAGADALAPGSADKRAVRMADGALLNRYWDDNDTPRPESWLDDVKTAKSNPNRP ATEIYRDLRSAAASGWDFSSRWMDNPQQLATIRTTSIVPVDLNALMFHLEKTLARASKAS GDSAGATQYDALANARQQAIEKYLWNDKEGWYADYDLKTHKVRNQLTAAALFPLYVNAAS RERATKVAAAAESRLLKPGGLTTTTVNSGQQWDAPNGWAPLQWVAVEGLQNYGQQKIAME VSWRFLSNVQHTYDSKQKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPQ EKPCDALPATRPAAAPSAQSKPAANDPAPAAAQKTGA >gi|289777623|gb|GG745508.1| GENE 671 761294 - 761947 665 217 aa, chain + ## HITS:1 COG:AGc2981 KEGG:ns NR:ns ## COG: AGc2981 COG0657 # Protein_GI_number: 15888930 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 207 92 304 310 228 55.0 5e-60 MGSEAWPAAHWLTAHGYTAYVLSYRLPGEGWQAGALAPLQDAQRALRLIRARESQVSVLG FSAGGHLLGMAACRPAFTSYPPEDALDHQPATADGAALIYPVITLLPPWSHTATHRLLVG PQASEAADRAWSVQTWVTTATPPCFLVQAQDDPISDPHNTLLMANACRQHQVPVQLFRYT RGGHGFGMGRPGTPTTAWPTAYAAWLKALASTMAQKS >gi|289777623|gb|GG745508.1| GENE 672 762130 - 763569 1841 479 aa, chain + ## HITS:1 COG:PA1730 KEGG:ns NR:ns ## COG: PA1730 COG2308 # Protein_GI_number: 15596927 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 11 475 5 470 470 677 68.0 0 MIKITLPDGHYYDEMLTAQGEQRPHYNAWWQWFRNTDQFSIRQKKAQAELLFHRIGITFN VYGEDEGTERLIPFDSVPRIIPAGEWQRIDRGIRQRVKALNAFLYDIYHEQNILRAGLIP AEQVLANEQYQPCMQGINLPNNTYAHITGVDMVRNNDGQYYVLEDNLRTPSGVSYMLENR KMMMRLYPEMFEQHHIAPVERYPSYLLQTLRESSLVDDPCVVVMTPGRFNSAYFEHSFLA QQMGVELVESADLFIKNGAVYMRTTEGPRRVDVIYRRIDDAWLDPLAFRADSMLGVPGLL SVYRAGGVVLANAIGTGVADDKSIYPYVPEMIRFYLGEQPILSNIPTWQCRKAEDLRYVL SNLELMVVKEVHGAGGYGMLVGPRSTKEEREAFRQRLLANPANYIAQDTLALSTCPTFVD EGLSPRHIDLRPYVLSGQEMRLVPGGLTRVALTEGSLVVNSSQGGGTKDTWVMEDDASC >gi|289777623|gb|GG745508.1| GENE 673 763563 - 764492 1339 309 aa, chain + ## HITS:1 COG:PA1731 KEGG:ns NR:ns ## COG: PA1731 COG2307 # Protein_GI_number: 15596928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 308 1 316 317 220 42.0 3e-57 MLSRTASELFWMARYLERAESYARVLDVTWKLSMIPRHSQQSRDLALPLNLSMTHELFQA RHARFTMSNLLNFFALDGNNPCSIYSCVEMAWNNAHAVRGSLSAEVWESINATRIELRTL RQQGLGELGSDGFFEWVKERVHLFRGAVIGTLLRNDALSFIGIGTLIERAFATTQLLLIK DQQLTNDPDPVREYYRLDTLLNAVSAREAYNSLYRQPVSRETVMELLILRNDIPRSLRAS IADLVGELEKIANDRSYQPLRLAHQLNVDLRFSTRDDLAQADLQTTLNGLLARINALSDS IRQTYLEAL >gi|289777623|gb|GG745508.1| GENE 674 764489 - 765304 1072 271 aa, chain + ## HITS:1 COG:PA1732 KEGG:ns NR:ns ## COG: PA1732 COG1305 # Protein_GI_number: 15596929 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Pseudomonas aeruginosa # 1 271 1 266 266 243 49.0 3e-64 MKLVIDHLTRYGYDEEVKFSTQYLRLTPRSTGRQTITAWTLTLPDGAAVTTTDGWGNVLH VLTLDNPHKEITIRASGIVDIADEGEETRDEEAELLSPLVFLRCTPLTRADTAIREFAQR LYRPDAAEESLNQLMADLLLRMPYSPGATQVQDSAADAFARAKGVCQDHTHVFLACCRAL EIPARYVSGYVYSDNAQHVAMHAWAEVWLDGRWLSFDITNNTRRLNQHLRLATGLDYLDA CPVRGTRLGGGGEIMLTNAEVREHSQQAQQQ >gi|289777623|gb|GG745508.1| GENE 675 765321 - 766067 1054 248 aa, chain + ## HITS:1 COG:PA1733 KEGG:ns NR:ns ## COG: PA1733 COG3484 # Protein_GI_number: 15596930 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted proteasome-type protease # Organism: Pseudomonas aeruginosa # 1 239 1 236 243 288 60.0 8e-78 MTYCVAMCLADGLVFASDSRTNAGVDHIATFKKLHVFHQEGERVLVLQSAGNLATTQSVI SLLSARIRTQQEPNLMQVTSLYDAAMLIGKTLLEVIQRDSSNQQNCSNTNFNCNLLLGGQ IAGETHRLFHIYPEGNFIEATRDTPYFQIGESKYGKPIIDRVLTIDTPLEQAMCCALISI DSTLRSNLSVGLPLDTLLYRSGSLSSAGQHRITDSDPYFNRIRKAWSEGLLHTFQTLPTW TPAEREEE >gi|289777623|gb|GG745508.1| GENE 676 766129 - 767214 1457 361 aa, chain - ## HITS:1 COG:mlr8490 KEGG:ns NR:ns ## COG: mlr8490 COG3839 # Protein_GI_number: 13477005 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Mesorhizobium loti # 1 357 1 351 351 363 54.0 1e-100 MASVELIDVAKRYGKQTVLQPLDLTIPDGSFTVLVGPSGCGKSTLLRLLAGLETLSGGTI LMNKRPVNDLDPADRDVAMVFQSYALYPHLTVAENLAFHMQVKKVDKQLQKSKVQQVASL LGIDKLLARYPRALSGGQRQRVAMGRAMVRNPQVFLFDEPLSNLDAQLRMELRAEIKSLH QRINTTMIYVTHDQVEAMTLADQIVVMRDGQIVQQGAPLAIYDQPCNTFVARFIGSPPMN LLPGQRAVRDGQPGVACGALWFPLAERWHQAVAQQGDAPLIVGLRPQDILPDAHGAPATV NIMEVTGESTLLHLDWQGFPVHVQVAGRVAVAAQQTLGLTLRRENLHLFDAASGERLAET R >gi|289777623|gb|GG745508.1| GENE 677 767201 - 767398 159 65 aa, chain - ## HITS:1 COG:SMb21217 KEGG:ns NR:ns ## COG: SMb21217 COG0524 # Protein_GI_number: 16264469 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Sinorhizobium meliloti # 1 47 252 298 311 57 61.0 5e-09 MIDTIGAGDSFNAGFLAALLSGKPAAAALRWGNTVAAQAIGTSPRRYPDWHTLQHHLEEA TDGQC >gi|289777623|gb|GG745508.1| GENE 678 767583 - 768248 711 221 aa, chain - ## HITS:1 COG:mlr3644 KEGG:ns NR:ns ## COG: mlr3644 COG0524 # Protein_GI_number: 13473144 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Mesorhizobium loti # 9 221 4 216 312 159 39.0 3e-39 MDNTRTPVLYIVGNYNIDLVMGTLTHWPAQGTEMMLEHSALRPGGSAGNCALAAAAMQLP HCTVGCQGDDAFTPWLAAQFPGGSARWPQYPCETSLTVAITHPNKERSFLSNHGHITRLT AGDVLSQLPAAAGEGDIVLLCGTFLCTGLLSDYPQLLATLRQRGFTLAVDTGWPPQGWSD PLRHEVDRWLGDCDWLLLNDVETLQLAGHPTLAEAAAALAS >gi|289777623|gb|GG745508.1| GENE 679 768251 - 769090 1297 279 aa, chain - ## HITS:1 COG:SMb21219 KEGG:ns NR:ns ## COG: SMb21219 COG0395 # Protein_GI_number: 16264471 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Sinorhizobium meliloti # 6 279 8 281 281 223 50.0 2e-58 MKRKGYIVLRYLAALAVAISILAPMLWLFLMSVSTTADLTRVPLEWLPRQWDFSRYGHLL SLAPGEPGALFLPALGNSLLVAAGATLVSLLLAIPAAFSFSRYPGRDGWLYAGLGIYMVP PVAFVLPLYFILEHFGLLNTRSGLVLVYCSLIVPFLTWMVKNQFDTLPQDIEQAARLDGL RIWQVLLRITLPLAKPMLGAAALFGWLLAWDEFFYALLFTSNLAAQTLPVTIAGFTAGRA TDDGLVAAVGILASVPPLLIAIWLQKSLVSGLTNGGSKG >gi|289777623|gb|GG745508.1| GENE 680 769080 - 769988 1162 302 aa, chain - ## HITS:1 COG:mlr3640 KEGG:ns NR:ns ## COG: mlr3640 COG1175 # Protein_GI_number: 13473141 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 11 290 9 286 294 263 56.0 4e-70 MLSLQRREHRQAWVLLAPMLIAMFILTAWPLARTLWLSFTDTALAGSGEATHYVWLDNYL YALTDPDFRAAFARTLYFTVVSVAIEGAIGVLVALLLNQRFVGRNVLRVLVILPWALPTI VNAMMWRLNFNPDYGSVNALLSQLGLIDSYRSWLGSPDSALHAVMLADIWKNYPLVTLLV LAALQSVPDDLYEAARLDGASAWRRFRAITFPAIVGPLGVALVLRTIDAFKVFDIIYVMT RGGPLDSTKTLSFFVYQESFSYLRAGSGAAYAMLMSLMCAVLIALYLFLLLRQRLRSVDD EA >gi|289777623|gb|GG745508.1| GENE 681 769998 - 771242 1640 414 aa, chain - ## HITS:1 COG:mlr3639 KEGG:ns NR:ns ## COG: mlr3639 COG1653 # Protein_GI_number: 13473140 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 25 404 25 404 412 475 62.0 1e-134 MKYHSALRVNACLLAMLVISGSVSAATQINALFMTQAAYSENDIRAMTSDFEKQHPDVKV NLEFVPYEALHDKIVAARGAGGNGYDVVLFDAIWPAEFSRFDLLQDVSSRIAADEREKIF PGAMNTVVYQGKTLGMPWILDTKYLYYNKAMLDKAGIKTPPASWQQVMDDAKVLKDKGIV KYPLVWSWSQAEALVCDYTTLVSGFGGSFYQNGKLDFSTPASLKAVTLMKTSLDQGLSNP ASREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGDTPDKPGAV NGSMGLGIAKASQHPEEAWQYIHYLTSQPVQDKYAKLSLPVWKASYQDPAVAKGQESLIA AADKSLNVMLSRPETADYSRLSNTLQQQLQSVLQGKATPDVALKAVDTSAARLR >gi|289777623|gb|GG745508.1| GENE 682 771457 - 772665 1362 402 aa, chain + ## HITS:1 COG:AGl455 KEGG:ns NR:ns ## COG: AGl455 COG1940 # Protein_GI_number: 15890335 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 386 35 418 429 241 40.0 1e-63 MKTSGTNLEHARVHNRRVIIEAVRLHGELTRAELARLTALTPQTVSNIVAELEQMDLLTS HQPRRASGRGQPAVPVSLNPASAWSIGIHLDHQTLIVVLVDLAGEVHFRRLILVQKPQPG ATFARLAEVLNEIRALPTLDWSRVLGMGVVMPGPFGVEGISSTGPTTLNGWEGVDVAAEL GRLSGLPVTLENDATVAAIGERFHGVARQLNSFVYLYIGTGLGAGIFTDGHVYTGHAHNA GEVGHIVVAPNGRPCYCGNEGCLERYVSLQAAYEFCGLDPYRALPEDLLSVDAALFDQWI TSILAPLRQAINLLECVFDAETVVVGGMMPAPLLEKVLARLPPLYQSVRGRYLPAQRVKM GMTGTDTAALGAAALPIFDEFNPQFQVLMKAVNTNALFGKAK >gi|289777623|gb|GG745508.1| GENE 683 772713 - 773726 1122 337 aa, chain + ## HITS:1 COG:PA5102 KEGG:ns NR:ns ## COG: PA5102 COG3239 # Protein_GI_number: 15600295 # Func_class: I Lipid transport and metabolism # Function: Fatty acid desaturase # Organism: Pseudomonas aeruginosa # 16 324 2 310 312 200 47.0 3e-51 MRQHGKVSEVTEKKTAVYVDDQQRILIRQLARSWLWRSELPTWLLIVTVYGGWFACVAGW QTLGLMPATLLLIWFTTWYMSLQHELIHGHPTRLAWFNQLLGTLPLAVWYPYGIYRDSHL AHHRNHLLTHPEDDPESYYVTAESWQRFSAWQRRLIHLRNTFWGRLLLAPLMDIIHTLNR ALRAFREGDRRAIAMWSLHLLLLTGLLTWMAAQGFSPLWFVLAVSYPALALTKVRSFLEH RAADDPLARSVINEAGLPWRVLFLNLNYHAVHHDLPGVPWYALRQLYLHRQTAYLQRNQG FLVRGYGEWRRHFGRRAVAVNAHPGFGEQAQAGGEHG >gi|289777623|gb|GG745508.1| GENE 684 773719 - 774519 933 266 aa, chain + ## HITS:1 COG:PA5101 KEGG:ns NR:ns ## COG: PA5101 COG3221 # Protein_GI_number: 15600294 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 41 266 40 264 265 133 38.0 3e-31 MAERMTFPMYAIHRQQTQALWQAVQSLLAERGVTVTGDPPAADPEDLLDHWRQPTLLLSQ TCGYPLVTQLPEVQTVGCFHYAAPGCEGRRYRSLLVAREADSHRMLGDFFGRRAACNAEH SQSGYNVLRKMVAPLSREGRFFSAVVFSGSHRQSLRELQQENADIAAIDCVTYALLQRHQ PQALAGLVAIGWSPAAPGLPLITAGATPAATLNSLREALQQLVSDARYRPLCDALLICGY SDMPREAYAPLLAWRDEAAALGVSQL >gi|289777623|gb|GG745508.1| GENE 685 774567 - 775898 1674 443 aa, chain - ## HITS:1 COG:mll2278 KEGG:ns NR:ns ## COG: mll2278 COG2141 # Protein_GI_number: 13472094 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Mesorhizobium loti # 5 440 3 439 450 469 55.0 1e-132 MSTRHMILNLFFYNPQGDYRFSWRHPDAPEADIFTLNYYASLARKAEAATLDAIFVADHI AVWDTVPSGLTHYANARLEPLTLLSALAAVTEHIGLMATASTSYNEPYNLARYFASLDFL SNGRASWNVVTSWLEEEAANFGLEQLPLHGTRYQRANEFIDVVTRLWDSWEDGAAIFDKA HGLFADAGKVHHLDYQGEYFRVRGPLNVPRPPQGHPLLVQAGSSEAGKALAAAWSDMHFV FIHSIAEGLAYREEMNQRLRQHGRDPAHFKIIAGVLPVVVNSSEEKAARQQLNEQLMSDQ MAIDLLSSYLRMDLSTLPRDQPLPPLPDEESFDGIRTALKLIRQYDPRLTLLELGKLLLQ SSDSWLLLGSAEEIAAALTETWQAGAADGFNLMFPLLPGDFDRFVDQVVPILQRNGVMRD RYPPGTLREKLGLPAVENRFTAP >gi|289777623|gb|GG745508.1| GENE 686 775942 - 776841 1102 299 aa, chain - ## HITS:1 COG:MT3866 KEGG:ns NR:ns ## COG: MT3866 COG1732 # Protein_GI_number: 15843379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Mycobacterium tuberculosis CDC1551 # 27 299 63 339 343 150 35.0 2e-36 MKQLFGKAVTARRFRLSLLAAGLFSLSVSTYAAGVTVGGANFTESSILANIYASALKKNH IEANTRLNLGNREIIIPALQSGEIDIVPEYLGALLNFYNGKTEATSQQDVSAELAQALPA DFTLLNPAPATSITAWAVRAETAEKYHLRTLSDLKPVAPQLVIGGPPELAVRALGLPGLK RVYGLEFKAVKSLDMGGPLTRLALNSGKIDVATVVSTQGNLAKEKWVVLEDDKHEQPSQN VVPLVRKASLTPEIGAVLNEVSGKLDNATLIALNQQVDLQHKDPAAVAEQWVNANLSQH >gi|289777623|gb|GG745508.1| GENE 687 776902 - 777570 839 222 aa, chain - ## HITS:1 COG:BS_opuCB KEGG:ns NR:ns ## COG: BS_opuCB COG1174 # Protein_GI_number: 16080435 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Bacillus subtilis # 23 200 15 192 217 120 38.0 2e-27 MTLLLATFHWLTQPEHWLGDEGILLRLGQHLYYVLVSMAVACAIALPLGIALGYWRKGAF VVINLFNLGRAIPSLGLILLCIIVFGFNDIPVLAALIALSIPPILTNTWVGIYHADRPLC DAAIALGMTPWQSLWQVRIPLAAPLILAGVRTALVQLIATAVVAAYAGLGGLGRFLIDGL GQRDIPQVIGGSLVVSLLAIGGELLFARCAGRLVHRRIAAPY >gi|289777623|gb|GG745508.1| GENE 688 777570 - 778199 1003 209 aa, chain - ## HITS:1 COG:L65675_1 KEGG:ns NR:ns ## COG: L65675_1 COG1174 # Protein_GI_number: 15672830 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Lactococcus lactis # 18 200 19 201 204 92 32.0 4e-19 MIDWSWVIDNRAMIGDLLWQHARMVLLALLFGSLLTGGLLAVTLRWPATAQPLITLCGVL FTIPSLALFILLLPFTGLSLTTSLIGLTLYSLLILLRNVLAGMEKLPQAALESARALGYT RGFRFFDIELWLLLPSLFAGLRIASVTLVGLVTVTALIGQGGLGQLLLAGFNQDFLTPIV VSLVLSLLLSLVFDGLIARLGDWLAPWTE >gi|289777623|gb|GG745508.1| GENE 689 778192 - 779280 1313 362 aa, chain - ## HITS:1 COG:STM1491 KEGG:ns NR:ns ## COG: STM1491 COG1125 # Protein_GI_number: 16764836 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 352 1 367 382 278 39.0 8e-75 MIKLTHLFKTYPGSAQPAIRDLSLDIDHGEFCTFVGPSGCGKTTILRMINQLDIPDSGDV YIQGVRLADADIIQIRRQIGFVMQSAALFPHRTVAQNIATVPRLAGWSKARIRARIDELV ALMSLDSHLLHRYPHQLSGGQQGRVAIARAIAADPPILLMDEPFAAIDPVVRERLQDELL LLQQRLQKTIVLVTHDINEAIRLGDKIAIFQEGGVLAQFDTPDRILAHPASEFVRRFIGP EPNLKRLGMIQVGQLPRHDVPLLDEALTPIASAHPPLASPLRLVLDRQRRPLHWFDPQRG LTLPVERPLASSHSLRFAYSALLDVATGVLVHVDDEGQYQGAVSHTLLQQVLDGAVGVRS HD >gi|289777623|gb|GG745508.1| GENE 690 779511 - 779618 61 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVDFNQSMTACDMAEKTALPIATQKKNCEFNVSIV >gi|289777623|gb|GG745508.1| GENE 691 780038 - 780976 1117 312 aa, chain + ## HITS:1 COG:STM3245 KEGG:ns NR:ns ## COG: STM3245 COG0583 # Protein_GI_number: 16766544 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 311 1 311 312 502 79.0 1e-142 MNTFSLPKTQHLVVFQEVIRSGSIGAGAKALGLTQPAVSKIIGDMESYFGSELIVRRNTG VSLTEAGQVFLNWSEAITREMKNMVNEMNALTNSAVVDVSFGFPSLVGFTFMSEMVHQFK MTFPKARVSMYEAQLSAFLPAIRDGRLDFAIGTLSDEMKLQDLHVEPLFESEFVLVANRA RIGNGTVRLASLQHEQWVLPETNMGYYSELLATLQRSGIRRENIVNTDSVVTIYNLVLNA DFLTVIPCDMTTPFGSSQFVTIPIKEALPVARYAAVWSKNYRLKTAAASLVEMAKQYSSG QGNRHWQPIEIA >gi|289777623|gb|GG745508.1| GENE 692 781070 - 782059 1082 329 aa, chain + ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 553 90.0 1e-157 MHITYDLPVSIDDILEAKQRLAGKIYKTGMPRSNYFSERCQGEIFLKFENMQRTGSFKIR GAFNKLCGLTAAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDY SAEVVLHGDNFNDTLAKASDIVELEGRIFIPPYDDPQVIAGQGTIGLEILEDLYDVDNVI VPIGGGGLIAGIAIAIKSINPTIRIIGVQSENVHGMAASWYAGEITSHRHAGTLADGCDV ARPGKLTYEIARQLVDDIVLVSEDDIRQSMVALIQRNKVITEGAGALACAALLSGKLDSY IQNRKTVSLISGGNIDLSRVSQITGFVDA >gi|289777623|gb|GG745508.1| GENE 693 782085 - 783416 2060 443 aa, chain + ## HITS:1 COG:STM3243 KEGG:ns NR:ns ## COG: STM3243 COG0814 # Protein_GI_number: 16766542 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 443 1 443 443 770 94.0 0 MSTTESIASSQTSLSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILVMLVLAY PIAFYCHRALARLCLSGANPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT NTFMTFWENQLQMPALNRGVVALLLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVVISL SLIPYWNSAVIDQVNLSDIALTGHDGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYE AQFGREYTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPQNMADAKAQNIPVLSYLANH FASMSGTKSTFATLLEYGASIIALVAIFKSFFGHYLGTLEGLNGLILRFGYKGDKTRVSS GKLNTLSMVFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRG RLDNLFVTAIGLLTILNIVYKLF >gi|289777623|gb|GG745508.1| GENE 694 783444 - 784652 1671 402 aa, chain + ## HITS:1 COG:STM3242 KEGG:ns NR:ns ## COG: STM3242 COG0282 # Protein_GI_number: 16766541 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 402 1 402 402 625 77.0 1e-179 MTEFPVVLVINCGSSSIKFSVLDAASCDCLLNGVAEGINAERAFLSLNGGEPVALAQRGY EGALQAIAGALAQRDLIDSVALIGHRVAHGGDLFTESVIISEEVINNIRQVSSLAPLHNY ASLSGIASAQRLFPQVMQVAVFDTSFHQTLAPEAFLYGLPWEYYQNLGVRRYGFHGTSHR YVSRRALALLGLPEQESGLVIAHLGNGASICAVRNGRSVDTSMGMTPLEGLMMGTRSGDV DFGAMAWIAGETRQTLSDLERVANTASGLLGISGLSSDLRVLEQAWHEGHARARLAIKTF VHRIARHIAGHAAALQRLDGIIFTGGIGENSVLIRRLVSERLAVFGLEMDVARNQQPNSA GERLISADGSRVRCAVIPTNEERMIALDAIRLGRIHTAAALA >gi|289777623|gb|GG745508.1| GENE 695 784681 - 786975 3283 764 aa, chain + ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1404 87.0 0 MKVDIDTHDAQYADAWQGFRGTAWQTQIDVRDFIQHNYTPYEGDESFLADATPATTALWE QVMAGIRVENATHAPVDFDTNVATSITAHAAGYINQPLEKIVGLQTDQPLKRALHPFGGI NMIKSAFEAYGREMDPAFEYQFTALRKTHNQGVFDVYSPAMLRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGIRYLIRERELQFADLQPALERGEALESTLRLREELAEQRRALQQMQE MAARYGCDIAHPARTAREAVQWLYFAYLAAVKSQNGGAMSLGRTATFLDIYIERDLRAGR LNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVLGGMGLDGRTLVSKTTFR YLHTLHTMGPAPEPNLTVLWSQALPVAFKKYAARVSIATSSLQYENDDLMRSDFHSDDYA IACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTDPLRDEVLDYDTV MASLDHFMDWLAVQYISALNIIHCMHDKYSYEAALMALHDRDVYRTMACGIAGLSVAADS LSAIKYARVKPVRDHHGLAVDFVIEGDYPQYGNNDDRVDAIACDLVERFMRKIQALPTWR QAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLP FTYAKDGISYTFSIVPAALGKAPSAQENNLVGLLDGYFHHEETVEGGQHLNVNVLNREKL LDAIEHPEQYPNLTIRVSGYAVRFNALTREQQQDVISRTFTSQL >gi|289777623|gb|GG745508.1| GENE 696 787463 - 788521 1674 352 aa, chain + ## HITS:1 COG:PA4913 KEGG:ns NR:ns ## COG: PA4913 COG0683 # Protein_GI_number: 15600106 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Pseudomonas aeruginosa # 1 352 21 373 374 523 75.0 1e-148 MAFYAQADVKIGVAGPFTGPNATYGAQYWKGASQAVADINAAGGIKGEKIVLVQGDDACE PKQAVAVANRLVDEAKVSAVVGHFCSSSTMPASEVYDEAGILTITPGSTNPQITERGMKD LFRMCGRDDQQGAIAANYMLDVLKAKKIAVIHDKDTYGQGLADATRAALAKRGTKEVLYE GLSRGEKDFNALVTKIGALKPDVVYFGGCHPEAGPLVRQMREQGVQAKFFSGDCIVTEEL VTAAGGPQFTNGVLMTFGQDPRTLPEGKAVIEKFRASGFEPEGYTLYAYASIQAIAAAWN AVGTDNAKASDWLKSHDVDTVMGKKAWDGKGDLKVSDYVVYQWDDKGKYHQL >gi|289777623|gb|GG745508.1| GENE 697 788631 - 789545 1440 304 aa, chain + ## HITS:1 COG:PA4912 KEGG:ns NR:ns ## COG: PA4912 COG0559 # Protein_GI_number: 15600105 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Pseudomonas aeruginosa # 1 304 1 304 304 414 81.0 1e-116 MTAFFLQQLINGLTLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMVSAYLCAIGLALLSF FGIHSFPLLIFATLVFTIVVTGVYGWAIERIAYRPLRNSTRLAPLISAIGMSLILQNYVQ LSQGPNQQGIPTLLSGALRMTVGDGVVQITWTKVFILVAALVGMLTLTWIIQYTRLGRIC RATQQDRRMAAILGINTDRVISLVFVIGAAMAGLAGVLVTMNYGTFDFYIGFIIGIKAFT AAVLGGIGSLPGAMLGGLLLGVAEAQFAGLVNSDYKDVFSFALLVAILIFRPQGLLGRPL VAKV >gi|289777623|gb|GG745508.1| GENE 698 789555 - 790841 1798 428 aa, chain + ## HITS:1 COG:PA4911 KEGG:ns NR:ns ## COG: PA4911 COG4177 # Protein_GI_number: 15600104 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Pseudomonas aeruginosa # 11 428 8 425 425 557 78.0 1e-158 MGEFTRQPARDIKSALIDSVLAGLCALIVFGPIVGVVLKGYGFTLAPARVAILVAVVMAG RLALSLLLQSRRGKAFIARFEGADDGVYVRPPGYRSRLRWIMPLLAVLAIAFPFLASKYL LTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWAMLPLG AVMAVLAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWVSFTGGPNGVPVPSPTLFG LEFTRRARDGGIPIHEFFHVSYNPNLKFIFLYAVLCLVVMLVLLVKHRLTRMPIGRAWEA LREDEIACRAMGLNHVLVKLSAFMLGASTAGIAGVFFASYQGFVNPTSFTFFESALILAI VVLGGMGSTLGVVLAAFVLTVTPELLRGFDEYRVLLFGVLMVVMMIWRPRGLVRTSRSGV ALRKGVAP >gi|289777623|gb|GG745508.1| GENE 699 790838 - 791713 251 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 274 1 229 245 101 27 1e-19 MTDSILRVEHLMMHFGGIKALNDVNLEVERGSITALIGPNGAGKTTVFNCLTGFYRATGG SIVLRAREKVTDVIQVLGQKLHPDDFLHPAQLGRRIYYKMFGGTHLVNRAGLARTFQNIR LFREMSVIENLLVAQHTQVNRHLLAGILNTRGYRQAESQALDRAFYWLEVVEMVDCANRL AGTLSYGQQRRLEIARAMCTRPEMICLDEPAAGLNPVETQALSRIIRFLRQQHGITVLLI EHDMGMVMEISDHIIVLDHGDVIARGVPQAIQANASVIAAYLGAEEEETRR >gi|289777623|gb|GG745508.1| GENE 700 791710 - 792429 242 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 15 229 11 231 245 97 27 1e-18 MSQPLLAFNEVDVFYGPIQALKQVSLTVNEGETVALIGANGAGKSTLLMSVFGQPRIAGG EIFYRGEAISRKSTHFIASNGIAQAPEGRRIFPDMTVEENLLMGTIAIGNRYQAEDKARM YQLFPRLEERRGQRAMTLSGGEQQMLAIARALMSRPRLLLLDEPSLGLAPLVVKQIFQIL RELTAQGMTLFLVEQNARHALNLSDRAYVMVNGQIRLSGSGQALLNDPEVRKAYLGISG >gi|289777623|gb|GG745508.1| GENE 701 792435 - 793328 1227 297 aa, chain - ## HITS:1 COG:yjiE KEGG:ns NR:ns ## COG: yjiE COG0583 # Protein_GI_number: 16132148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 290 7 296 303 261 45.0 1e-69 MLANLEVKWLYDVIALEESRSFTLAAKARNISQSSFSRRIQSLEASLGFSIFDRSANPLQ LTNRGKIFVGYARNMLDDMDFQISRIKGLNNTTQKIRIDAAPSLSVLLLPEIIAGYTDRK NKTFHVESINVNDAVFNLKEGKSDFILSFYNEELMNYPFINHKIFDSYLHLVSPCDEHGR PLFHLHRGVLPLMKYANDSYMGRQVNQVIDRTPEITFSLTFVSSMSELLKRMILNGDGVG WLPQYSIQRELDEGRLTILDDRLSLPIGAWLYRSGSRLNQAAERFWQHIKTRNEPRE >gi|289777623|gb|GG745508.1| GENE 702 793612 - 795255 2262 547 aa, chain + ## HITS:1 COG:pckA KEGG:ns NR:ns ## COG: pckA COG1866 # Protein_GI_number: 16131280 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Escherichia coli K12 # 12 540 12 540 540 837 73.0 0 MSQQIESVKMALQELGINASGEFFYNPDYDLLIAHETAPELTGAARGVMTDSGAVAVDTG IFTGRSPRDKYIVRDEQTRDTVWWADSGLGRNDNKPLSPDVWRSLKSLVAGQLSGKKLYV IDAWCGASPDTRLGVRFVTEVAWQAHFVKNMFIVPSADELASFTPDFVVLNGAGCTNANW QAQGMNSENFVAFNLSERIQLIGGTWYGGEMKKGLFSVMNYLLPQKGIASMHCSANRGEA GDVALFFGLSGTGKTTLSTDPHRQLIGDDEHGWDDDGVFNFEGGCYAKTINLDPQAEPEI YGAIRRNALLENVVVRADGSVDYADGSKTENTRVSYPLSHIDNIVKPVSRAGHPSKVIFL AADAFGVLPPVSRLTTEQMQYHFLSGFTSKLAGTERGITQPTPTFSACYGAAFLLLHPTQ YASVLAAKMAESGAEAWLVNTGWNGEGKRLSLRDTRSIISAILNGTTGPLRDETIPVFGL AIPQSIPGVDSAVLDPRNGWSSADKWQEKAESLAQLFMDNFKQYSDTEAGARLALAGPQL QNSAVEA >gi|289777623|gb|GG745508.1| GENE 703 795305 - 795781 801 158 aa, chain - ## HITS:1 COG:PA0478 KEGG:ns NR:ns ## COG: PA0478 COG0454 # Protein_GI_number: 15595675 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 1 158 1 158 158 213 67.0 1e-55 MSITIRQATPDDATAIYDMIYELAVYEKAPEEVVTTAEEIRETLFASGSKTEALICEVAG KAVGYAVFFTSYSTWLGRNGIYMEDLYVTPDYRGIGAGKALLKTIAQYAVQRQCGRLEWS VLDWNQPAIDFYLSIGAQPQDEWVRYRLTGDALRAFAE >gi|289777623|gb|GG745508.1| GENE 704 795889 - 796812 1052 307 aa, chain + ## HITS:1 COG:PA0477 KEGG:ns NR:ns ## COG: PA0477 COG0583 # Protein_GI_number: 15595674 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 298 1 302 308 202 45.0 8e-52 MHPVLRRIDLNLLPVFDAVYRSRSVRLAAEELAMSTSALSHALSRLRSALNDPLFYREGH RMCPSVYASQLAPSIASALKFLNQELTPPAAFVPAASTDCMQIAITDFTAFCVFPTLMHH LQREAPGLRFELRYLPHSPALTELLAGEVDLALGFNTPDEPAHPDLEEINWLRDEYVVIS QADRTALTLDAYLAARHLVVTPWNEQQGVLDRELERQGYSRQVAMKTPSMLSAPFIIEQS DLLMALPRRAAETMARAARLTIFPLPFPVPPFDVKIYAHQRSGKREATRWLIALLQTLVG ESAASAS >gi|289777623|gb|GG745508.1| GENE 705 797022 - 798413 1763 463 aa, chain + ## HITS:1 COG:STM0689 KEGG:ns NR:ns ## COG: STM0689 COG0477 # Protein_GI_number: 16764059 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 33 454 1 422 434 536 68.0 1e-152 MDAFITLISFPVLFQSSATGARQRVDNKLETCMHSTTSLMSTRDRIGAILRVTSGNFLEQ FDFFLFGFYATYIAHTFFPASSEFASLMMTFAVFGAGFLMRPIGAIVLGAYIDKVGRRKG LIVTLSIMATGTFLIVLIPSYQTIGLWAPLLVLIGRLLQGFSAGAELGGVSVYLAEIATP GRKGFYTSWQSGSQQVAIMVAAAMGFALNAVLEQSAISDWGWRIPFVFGCLIVPFIFILR RKLEETQEFTARRHHLAMRQVFATLLANWQVVIAGMMMVAMTTTAFYLITVYAPTFGKKV LMLSASDSLLVTLLVAISNFFWLPVGGALSDRFGRRPVLIAMTLLALATAWPALTLLANA PSFLMMLSVLLWLSFIYGMYNGAMIPALTEIMPAEVRVAGFSLAYSLATAVFGGFTPVIS TALIEYTGDKASPGYWMSFAAICGLLATCYLYRRSAVALQTAR >gi|289777623|gb|GG745508.1| GENE 706 798428 - 799234 966 268 aa, chain + ## HITS:1 COG:YPO0080 KEGG:ns NR:ns ## COG: YPO0080 COG0725 # Protein_GI_number: 16120431 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Yersinia pestis # 71 255 88 272 272 108 36.0 8e-24 MRKTTGTLLATLLLAATGGSALAAEVTVMISGGFKAALEKLAPAWEKQTGNHLVVIPGPS MGKTPQAIPNRLARGEHADVVIMVGDALTSLEKAGRTQPGSRRELADSPIGVVVKAGAPL PAIHSADQLRATLLAAPSVAYSDSASGRYVSSTLFHTLGIDDAMQSKAQMVERIPVASEV AKGRYAIGFQQVSELLPVPGVTFVGELPDNLQYITRFAGAVTISADHPQEGKALLAYLAS PAAQETIHATGMRSVAATTPVSQKDTVQ >gi|289777623|gb|GG745508.1| GENE 707 799209 - 800108 919 299 aa, chain - ## HITS:1 COG:ybhD KEGG:ns NR:ns ## COG: ybhD COG0583 # Protein_GI_number: 16128736 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 6 293 25 312 338 216 37.0 4e-56 MPVNFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFERTTRRVT LTLYGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQAR YPQVRIRLIDSSVGNVIEAVSSGQADFGLCFAKNLPASLEFTPLADDRYVAACRYDHPLA RKTHLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLGMVEAGIG IAAVPAMSMPAGEHSVLRAVPLTDPVVTRTVGLIRLSGRIQSYVAAELEKLIIEQYPSG >gi|289777623|gb|GG745508.1| GENE 708 800221 - 800703 647 160 aa, chain - ## HITS:1 COG:no KEGG:KPN_02279 NR:ns ## KEGG: KPN_02279 # Name: not_defined # Def: cold shock protein E # Organism: K.pneumoniae # Pathway: not_defined # 1 160 1 160 160 297 99.0 1e-79 MAMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAY AVKVIPESKYIYIAGERLKLTSIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKST VQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV >gi|289777623|gb|GG745508.1| GENE 709 800894 - 801592 202 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 19 226 83 276 287 82 30 6e-14 MSTIIDTFVAPPCREQITLLYQDEHLLLINKPAGLLSLSGKDPRNLDSVHHRLVQRFPGC TLVHRLDFGTSGLMVVARNKDVNALLCQQFSQRTVAKVYTALLCGHLAEDEGIVEAAIAK DPARFPRMSLCARHGKPARSRYRVIDRLYQSRDGERALALTRVALTPETGRTHQLRIHCQ LLGYPILGCDLYGGRELPGTEQAPRLMLHASELRFVHPVSHEPMHIQQASPF >gi|289777623|gb|GG745508.1| GENE 710 801617 - 802156 747 179 aa, chain - ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 264 88.0 7e-71 MTKLTLQEQMLKAGLVSSKKMAKVQRTAKKSRVQAREAREAVEENKKAQLERDKQLSEQQ KQAVLAKEYKAQVKQLIEMNRITVARGDIGFNFTDNNLIKKIMVDKTTQTQLINGRLAIA RLAVDNKPEGEYAIIPAVVAEKIAQRDASSIVLHSALSQDEQDEDDPYADFKVPDDLMW >gi|289777623|gb|GG745508.1| GENE 711 802525 - 803214 876 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 372 86.0 1e-103 MNLTKTDRLMVTLGRQIVSGKYLPGAALPAEADLCEEFATSRNIIREVFRSLEAKRLIEM KRYRGAFVAPRSQWNFLDSDVLQWALEQDEDPGLIAAMSEVRNLVEPAIARWAAERATSS DLAQIEAALNDMIANNQQRDAFNEADIRYHEAVLASVHNPVLQQLSVAISSLQRAIFERT WMGDEANMPQTLQEHKALFDAIRHQDSNAAEHAALTMIASSTRRLKEIT >gi|289777623|gb|GG745508.1| GENE 712 803211 - 804128 630 305 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 407 72.0 1e-113 MTSRYIAVDWGSTNFRAWLFEGERCLDSRQSAAGIARLNGQSPAAVLATQIHGWREGRTP VVMAGMVGSNVGWKNAPYLPLPADFTAIGNQLTAVDEGIWIVPGLCTSREDHHNVMRGEE TQLLGARLLAPAAVYVMPGTHCKWVKTDGRRIEDFRTVMTGELHHLLLTHSLIGAGLPEQ QAAPAAFHAGLARGLATPAVLPQLFETRAAHVLGALAREQVSEYLSGLLIGAEVASMRAF IADEQAIAIVAGPSLSARYQQAFQLLGRQVTTVSGDDAFLAGIRSIVHAVANLTSADRYS ARHHP >gi|289777623|gb|GG745508.1| GENE 713 804073 - 804690 643 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 223 63.0 1e-58 MQWQTSLPLIAILRGITPDEALAHVGAAIAAGFDTVEIPLNSPQWQQSIPAVVEAYGAQA LIGAGTVLQEAQVDRLAQLGARLVVTPNVQPAVIRRAVGHGMTVCAGCATASEAFTALEA GAQALKIFPSSAFGPDYIRALKAVLPASVPVFAVGGVTPENLAQWIEAGCAGAGLGSDLY RAGQPVARTAEQAAAFVRAYQEAVK >gi|289777623|gb|GG745508.1| GENE 714 804687 - 805835 1540 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 715 87.0 0 MKITKLTTWRLPPRWMFLKIETDEGIVGWGEPIVEGRARTVEAAVHELGDYLIGQDPARI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKALNAPVWQLLGGLVRDKIKAYSWV GGDRPAEVIAGINTLRGMGFDTFKLNGCQEMGMIDSSRTVDAAVNTVAQIREAFGNDIEF GLDFHGRVSAPMAKLLIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTAIPLAAGERMFSR FEFKRVLEAGGLAILQPDLSHAGGITECFKIAGMAEAADVSLAPHCPLGPIALAACLHVD FVSYNAVFQEQSMGIHYNQGAELLDFVKNKADFNMEGGYFKPLMKPGLGVDIDEEKVIEM SRRAPDWRNPVWRLADGVVAEW >gi|289777623|gb|GG745508.1| GENE 715 805930 - 807243 1685 437 aa, chain + ## HITS:1 COG:BMEII1096 KEGG:ns NR:ns ## COG: BMEII1096 COG0477 # Protein_GI_number: 17989441 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Brucella melitensis # 9 422 36 447 451 299 42.0 6e-81 MSIELCTSTLKKLNSKIIPFIIICYFVANLDKTNISIAALQMNADLGLTASMYGLGVGMF YISYIIFEIPSNLIMTRVGARIWIARIMITWGMVSAGMAFVQTPTQLYIMRFLLGMAEAG FTPGIIYYISCWFPKRNRARAMSFFYMGSVLASIIGLPVSGLILNMHGIADVAGWRWLFA IEGVPAIVLGALVLWLLPSSPQKAAWLSEAEKGWLTAQIAADNRGAVVNQHASWFSALKN KVVLLLSLVWFLQAFGSIGITLFLPLILKSMASEQSDVVISLLSAVPFIFACLFMYLNGR HSDLTGERAWHMGLPLILAGLSLAVAIYAGNLLVAYLLLVLTVGFNFALTPVFWAVTTEK LAGVAAAASIAFINTIANFVGLGLPPLLGKIKDLTNSYHSGLLIVAVALALGGVIGIIVS RSGQKPSAFHTLKEDKL >gi|289777623|gb|GG745508.1| GENE 716 807240 - 808187 1129 315 aa, chain + ## HITS:1 COG:YPO2536 KEGG:ns NR:ns ## COG: YPO2536 COG1052 # Protein_GI_number: 16122754 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 2 296 5 301 316 251 46.0 2e-66 MKLNVLKQASLPDALTAELARRYHLVELTALTDADFRALAGTFTVLITNGEATVTRELIA SLPALELIAVFGVGYDGVDVQAAAEHQVRVSHTPGVLTDDVADLALGLMLATSRQIVAAH KFIEAGEWAAGGFPWTQKVSGSRVGIVGMGRIGQAIARRCEGFAMQIAYHDRKRLPALNY AWREDLLTLAAESDFLVICTPGTAANQGLINQPVLAALGEKGILINISRGSVIDEPALVA ALESGIIAGAGLDVFSHEPAVPAGLLQRSNVVVTPHMASATWSTRAAMAQLVLDNVACWA EKKALVTPVAESLAD >gi|289777623|gb|GG745508.1| GENE 717 808245 - 808574 365 109 aa, chain - ## HITS:1 COG:PA4164 KEGG:ns NR:ns ## COG: PA4164 COG2105 # Protein_GI_number: 15599359 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 106 1 107 108 111 48.0 4e-25 MKPLFVYGTLCPGRSNAHILEAIGGEWRPGYVTGTFYARGWGAAADFPGIVLNAHGPRVN GYLFLSDRLAAHWPMLDDFEEGYDRVPVEVTTDDGQQVSAWIYQLQPRE >gi|289777623|gb|GG745508.1| GENE 718 809207 - 810547 1454 446 aa, chain + ## HITS:1 COG:YPO1467 KEGG:ns NR:ns ## COG: YPO1467 COG3522 # Protein_GI_number: 16121742 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 446 1 450 450 501 60.0 1e-141 MKIFRPLWRDGAFLVPQQFQQQARWDTHVADTVSRMALAHPWGVLRAEFDASALTLSRLN ATRLIVRFADGTLIDTELADTLPPVCDVSGVMLDSVEVVLALPLLSASGGNLDDGQESAR PRRWRAEQVTVQELAGHERSELAVLRHALTLRLSTEENAAFLTCPVARLVRDAQGQWIVD PEFIPPLLSLAASPTLVSELGELLHRLQARRRRLMAMRRESNARMADFAVADVSLFWLLN ALNSAEPVLSELHQDPSRHPELLYRELARLAGSLLTFSLEHHLEAIPRYRHASPEQVFPP LFALLDTLLEVSLPSRVIAIALEQGADREIWRGRLHDARLREGADFYLSVRSSLPPHQLQ SRFPQLCKAGSHDDVAEVVNIALSGIAIKPLSHVPAAIPLRLENQYFALDLSTDAARAML EAGNCTFYTPESLGDVKLELFAVLRS >gi|289777623|gb|GG745508.1| GENE 719 810544 - 811197 711 217 aa, chain + ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 17 213 22 223 228 132 41.0 4e-31 MNTSESDLINKTFYPGWLMVSQLRCGQPVTDGEALYRQACRWVTEAREALTAAGVSDTSA EQMLYAYCALLDESVLNRASQDDGYRRWRKDPLQARFFSTLNAGEELWERIRQLLREPTA DAAVLTCFYRTLQLGFVGQYRAQDDERREDVAHALGARVPPFSLTQEAPVVVRASRLRSG RRMYWCGWTAGIVALAALWLTFSAVLSQMVAQIAGQG >gi|289777623|gb|GG745508.1| GENE 720 811201 - 812898 1400 565 aa, chain + ## HITS:1 COG:YPO1469_2 KEGG:ns NR:ns ## COG: YPO1469_2 COG2885 # Protein_GI_number: 16121744 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 428 565 1 138 139 183 64.0 8e-46 MRDNARRLFTLLTVILALWLVLGFWPLSIGNQVIFSLCILLAGSAALWRQRRRAVSPQRP EIVLPPEDFQGAVVLVCGDTDGLFPGRSAHCETRHGWYLRGDSAEQLPLLTQYLAAARPA LVSQVSVLLAVVPEHHPSGEQLAQSLRDWRRSIVQCRTWLNGLPPVWSVFWVTPPGGQAG ESRWFTVTPERPGLQVQQKGQAPQSVAEWQREGSSDSRLYQTLWLESILTLAENALFRPF HARQAELPPLNLCAAGICLTPVAAVANNLWQQQIAGITTLSPGNAAAPGPHPLPDLLLSS LPHRHGVSRRMRDAGLAAGVGFLFLALAMLASFINNQRLVRSVGDHLAVYYRLSGTPPMP KLQAQQRLRTDSRQLDDWLRRGEPLRYRLGLYQGMRLIPFVEAAINDWAPPPPPRPVIKQ VVQGPQTIRLDSMALFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIGNDKS NQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPDGRAQNRRVEISLVPQ KDACLTPGTANTSGAGADALKNETE >gi|289777623|gb|GG745508.1| GENE 721 813085 - 813180 60 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSAKDSAREMLAAINVEGSGFWLLFLFLSQ >gi|289777623|gb|GG745508.1| GENE 722 813360 - 815846 1696 828 aa, chain + ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 13 570 13 570 571 476 47.0 1e-133 MDTFSMITGTTLNRYQLDIPSCTASLDVEEFSGAEKLSELYYYTITFTSAEKNIDAAQLL SKPAMLTMGGGALQQLADCKRVHGVITTFRRVSRSEDQSTYQITLQPFLSLLDKQFRSHR FFVNKSVPEVVEQVLQEHHLHDWEYEFNLKQHYPRREQINQYQESDLAFIQRLLAEVGIF YFFTLQEEAQSEVVHFADAQRALMFDKTLPVNSPSGMSDSGAESIWGLNITHNVVEANVT TRDYNPRDAQSVLQSATADMTRGNGEGITYGEVYHYKLRHRERGDKIDPQAETANFYARL DHERFLAHQTLITASSTAAWLAPAQVLTVTDSLPSTLPAPVQDPLLITGTGFTASRREAL RVTLLAVPYSETLCWRPPLLPRPKVTGTMTARVTSAKANDIYAWQDASGLYRVKFDADRE DKGQGQESMPVRLAKPYGGDVYGFHFPLIQGTEVAIAFHEGDPDRPYIAHALHDSRHVDP VTEKNSTRNVIRTPANNKLRMEDKRGEEHIKLSTEYGGKTQLNLGHNVNAQRELRGEGAE LRTDKWVSIRGGAGVFISADKQPSAGDRMLAMEEAIAQLENALGIAKSLASAAESAQALP SDTGNQQTLNDALKELAQPGIVLNAPQGVSISSPQAVRLFSGSASVGIVSQQNTDISALK RFTVAAGEAVSLLARKAGMKLFAAKGKMEIQAQDDALEATAKKDITVTSVEGRVEITAAK ELVVNCAGAYIRLSGGNIELGCPGNILLKSANVQKMGAADYDANKPELPVGFSEFFTAKD EESGEILPFTRYRITTGEGKVFEGRTDAEGKTVAVYTALPDALHIELL >gi|289777623|gb|GG745508.1| GENE 723 815865 - 818126 955 753 aa, chain + ## HITS:1 COG:no KEGG:KP1_3382 NR:ns ## KEGG: KP1_3382 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 753 1 753 753 1476 96.0 0 MATGEEKSKTSVQGTGTVVKGKYGPECYFHPGSATLLFLEASDTKIIEQEHDFLSGLLET QKQAQKNLDDINFEAITQAGRVPARKFESEITKAYEALNKANQALRKELMSLTANPPEGE LLNDKMKDTAIGIMELIPLKNNTVKGFKKTYVRSDKIKQQWRTYKLSEVDKESGEASFIK YKNKTIVSQDANGNQVNKTIRQGKIDTAELKKQLSNVPVSLKFDLVDDTNVIVSHWAEEM NKSLTWPKGDGKVDESVYHQYVDISAQAQLMRYSHGGGASAEYNPSEKKLEGKIEGHASF ALGEAKAETALYLPDRLGVSLLFPAKKVTPQTPDGVCNMGALRFAMKLVLSGSVGASAAI ELGVTVDWSGEMGKGYGIKGRPATLTAPPLPGQQQVNLKTSTIPEAQGGGEIGVFVGAQA GGNISGAIEWFDPHPDDTPVAKGVEKDNKPIVNKEKKFAAIAKLEAGMTVQAGAGGSGVF YITYIQGRFRIYCKAALCWGVGAKGEVGFEVDGSSFAAFMKSFLYMLRNVDYQKLEQMMA GDAFRSLCAIPIIMAAQGIQAGEAMLKNMGIILRRIETDLEDENKRVHLMNSILSNPDQL KYTPPETKGAVIATLIDQNWVDWLDPRNQNNDFFSVNSWKLGPLKRRKQAVFMALKWIQS QADYNNVMQHLTLSPGEKKGNKELNEKDVINFLGIGEQKLFFYTNYGEKLTLLHNNLPVF VDPDEPFKPIPDILMSEYLAMIDDQHPTGTMTA >gi|289777623|gb|GG745508.1| GENE 724 818148 - 819038 43 296 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 38 251 9 210 246 95 31.0 1e-19 MRKLIVVASVAAGLLTGCDQGNTTGSEKAAKALVDKSVSNMVPVQGGEFLMGDFGPLVGQ KLPFSIQQDDKTLHKVILSDFSISKYKVTNDDFNVYLKVTDKKNPPVDILAKRHPSLLKG DYPAGVIWQQAKDYCQWLGKKSGKKIDLPTEAQWEFAARSRGQYLPFATNNGEFSPGKNV PSQDELNKYTDGMGLPIYPVGKYPSNPLGLYDMGLSGSEWTNDWYAADYYSNSPVKNPQG PEQGTEKVLRGNVGGDRQYALTMFRQSASPLPEEVDGDYEKYGVGPQYVFRCVVNK >gi|289777623|gb|GG745508.1| GENE 725 819214 - 820104 125 296 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 38 251 9 210 246 95 32.0 1e-19 MRKLIVVASVAASLLLGCDQKSTDKRETLSEALVAKSLSNMVPVQGGEFLMGDFGPLVGE KLPFSINQDDKVLHKVVLSDFLISKYKVANKNYKEYSKLTNKRALPVGPFMKNHPSLLSD DYSANVTWQQAKYYCQWLGKESGKKIDLPTEAQWEYAARSRGQYLPFATNNGELLPGKNF PNQDELDSYTDGIGLPFYPIGKFPPNPLGLYDMGLSGSEWTNDWYAADYYSHSPVNDPQG PAQGTKKVLRGNVGGDRQYALTMFRQSASPLPEEVDGDYEKYGVGPQYVFRCVINK >gi|289777623|gb|GG745508.1| GENE 726 820438 - 821181 42 247 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 18 201 29 210 246 87 34.0 3e-17 MGDFGPLVGEKLPFSINQDDKVLHKVVLSDFSISKFKVTNDDYNKYLQITGIKKPPINIL LKEYPSLQKGDYSVGVTWQQAKDYCQWLGKESDKNIDLPTEAQWEYAARSRGQYLPFATN NGNFELGSNIPEQKKLDEYTDGYGFPIYPIGKYPPNPLGLYDMGLSGAEWSNDWYSTDYY SHSPIYDPQGPVKGNEKVLRGYVGGDRQYALTIFRQSSQPVPKFAGRDDYQKFGVSPLFV FRCVINK >gi|289777623|gb|GG745508.1| GENE 727 821706 - 822251 133 181 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 8 135 99 210 246 84 40.0 1e-16 MQKGYYSVGVTWQQAKDYCQWLGKESGKKIDLPTEAQWEYAARSRGQYFQFPTNNGDYLP GKNVPGKDELDKYTDGFGFPFYPVGKYPPNPLGLYDMGLSGSEWTNDWYAADYYSHSPVN DPQGPAQGTKKVLRGYIGGDRQYALTMFRQSKLPVPKIDKDDDYEKYGVGPQYVFRCVVN K >gi|289777623|gb|GG745508.1| GENE 728 822387 - 822611 132 74 aa, chain + ## HITS:1 COG:no KEGG:KPN_02255 NR:ns ## KEGG: KPN_02255 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 67 2 67 114 125 91.0 8e-28 MLIKNLKEEMLRFEDEAKTDWLFPNPMPFGLERVMTQQWVRAYLGFPMVYVEAKIVMTAY RGGRDIYLTCSSSK >gi|289777623|gb|GG745508.1| GENE 729 823472 - 823738 182 88 aa, chain + ## HITS:1 COG:YPO0866 KEGG:ns NR:ns ## COG: YPO0866 COG4104 # Protein_GI_number: 16121173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 3 80 15 90 101 60 44.0 8e-10 MSKGFVLLGDKTTHGGAVISASSAMIVNGKPVALVGDKVSCPIPGHGTNAIIEGAPEWSS DDKAIVVDGCKCQCGCQVISGAPECAIG >gi|289777623|gb|GG745508.1| GENE 730 823742 - 824899 615 385 aa, chain + ## HITS:1 COG:no KEGG:KP1_3371 NR:ns ## KEGG: KP1_3371 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 385 1 385 385 734 97.0 0 MGWVRTKALTMEQPSAPSLTRWLFAGVLMAIIGILLFILHASGTVKILSVINIWWVSLMP AGCWLLIFCLRCYLRDRDLKAHQFLLKEAEYGQQRWEDWAGRWLAVLGSAVLLPDHTSAA HWGSERPQQYGLTRRINYLPAEEPVQLSAMHALLTSIEERVQCLPEELPLHVTLITDNPS PELTSSFSNLWKEHIPGRAVSDDITVTGSFSLSEVEERLKQPVLTVNLLLVIQLNGGTAY SDGLAVLLLTSDDVAQKYHLPHSSRLLRPMPLDMTNFEDDITLFLETQTVACQTPSVIGD AKKWTERSAALITQGGKMHTPWKAEDIALLEKWCGIPGPAAPWLLAALAADLVSLRKQPL LALFSSEQEHFISTITPGSEDEYTG >gi|289777623|gb|GG745508.1| GENE 731 824883 - 828293 2452 1136 aa, chain + ## HITS:1 COG:YPO1482 KEGG:ns NR:ns ## COG: YPO1482 COG3523 # Protein_GI_number: 16121754 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 74 1129 86 1134 1140 866 46.0 0 MNIPGNGLGRFGLAGLTLAGMAAIWWGITRYGGMLNINTRGEQVLAFVLVCLALVFVFYL PAMSRRVKESLYRRQSQQASVLPGEEGRVALTPPHHITVGEIRQTLRYQYGRAWSRKVRI LLIIGSVRDVEQLTPKLTQELWQEDQGTLLLWGGDPGAAVDNAWFTALRKLRYRPADGMV WVTSGFDGVLTTMNRTKARLTPDEMDNVSHSLKLRYEALGWKLPLYVWSLYEGGNEKNGR ITQPVGCLLPAGCTPQIVAEQFTALAPLLIEQGIQQICGQPQHNFLLALADQLTREAEAV VESLSILLNPYRPLPLAGVVFSEASVEAGRSVRHHWGRDNRWETIPDSVLWLPAGLRPRK QGVNWMRGMSVATAALMLLWAASMTVSFIANRELVATAQQQVQQASAGKQPLAVRLHALS ALQKTLSQLEYRSQHGAPWYARGGLSQNDDLLAALFPRYGERAQPLLRDAAARHLEEQLT AFVQLPPDSPLREKMTKTAYDQLKLYLMLARPERMDAAWFAGALMREWPQRSGVADGVWQ GSGPSLLAFYAASLASHPQWRLPVDDGLVSQVRTRLIRQLGQRNSESTLYQKMLAQVANQ YADMRLADMTADTDASRLFSTDEVVPGMFTRQAWEQAVQPAIEKVVVERRDEMDWVLSDT KQPAAQSTSPEALRARLAERYFADFSGAWLDFLNSLRWQRAATLSDAIDQLTLMADVRQS PLVALMNTLSVQGRTGQTGEAIADSLVKSARQLFNRDNPPAIDQRSGARGPLDATFGPVL ALLDNRDGGTPTSRLSLQTFLTRVTQVRLRLQQVTNATDPQAMTRLLAQTVFQGKAVDLT ETRDYGSLVAAGLGQQWSGFGQTLFVRPMEQAWQQVLTPAAESLNAQWRSAVVEDWNSAF GGRYPFKNTSSEVSLPLLAKYLNSETGRIARFLQTRLNGVLHKEGSRWMADSINAQGLTF NPAFLQAMNTLSHLSDVAFANGEAGLHFALRPGTADGVMQTELVIDSQKLVYMNQMPAWR RFSWPADTEAPGASLSWISTRAGTRQYGDFPGAWGWIRLLDKAVVSAYPGTSSSWSLSWK APDGLLLNYTLRTEAGEGPLALLALRNFTLPETIFSVRAPAERVPLTDDIPGEEGY >gi|289777623|gb|GG745508.1| GENE 732 828427 - 830190 1668 587 aa, chain + ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 587 1 587 587 771 63.0 0 MDDLTLRYFDAEMRYLREAAKAFAQAHPDRAAMLDLDKAGTPDPYVERLFEGFAFSVGRL REKIDDDLPELTEGLVSMLWPHYLRTIPSLSIVALTPTLPAMKMAETMPAGFEISSRPLG PKNTVCRYRTTRDLTLNPLALEEAVMTAEPDGRSVLRLRFTCSELADWSQTDLRRLALYL GEDAVTGSALHLWLTRRQAALYLRLPGRAERVSLDGYFSPGGFSEEDRLWPKGESAFSGY QLLLEYFTFREKFMFVQLNGLENITLPAGISHFTLEVVFSEVWQSDLPVSASSLRLHCVP VINLFTLEADPLTISGLESEYLLRPKRLQDGHTEIYSVDSVTGSGRTGEARYVPFTRFRH QGGMMRRHAPERYYHTRVKRGVTGMHDTWLILGGQQWEADRALARETVSLRITGTNGQLP RRALQSTLLDRCESISATPLTVRNLCKPTLPVYPPAEDRYHWRVMSHLGTRFLNMMSSAE VLRGTLSLYNWREDELNNRRLDAILAVSHHRIQRFEQGFLLRGLDIEVTLDGSGFTGAGD VHLFGNMLNRFFALYADMNQFNQLTLIVQPEGKCIRWKENHSLRLPG >gi|289777623|gb|GG745508.1| GENE 733 830220 - 831239 591 339 aa, chain + ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 319 23 341 361 294 52.0 2e-79 MNFYRFCQLLEKIQPKAPVIGSDWQLGDEPIRFRPHPGMGFPAGEIRGMDDPEPPRPPAV RVAFMGLYGVESPLPTHYSDDIAQRREGVEATEDFLDIFNHRLIAQYYRIWRKYSYPATF RAGGTDNTSQYLLGLAGLGIPGCATVAAAPLSRFLALLPVMMLPGRSGEGMEALVALLAP GTRATVYHHDPCRIPLSQPLTMSIRQPVSLQHRPVMGTHATDVNSQVLLQLATENPDEVR GWLPGGELFSDLMALLHVWLGSHLDVRLQLCVARHLLPDAQLCCQQAHAVQLGRTAVLRP LDAQKQADDRITIYLGRYQRVRENIIHRRESDEDGDYRR >gi|289777623|gb|GG745508.1| GENE 734 831220 - 831756 454 178 aa, chain + ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 20 177 2 162 162 145 47.0 3e-35 MAITADKPSARLLAFLMVTVLTGCGLTQTMKDGAVSVTQSIFYPQVKTLHLDLRAREGVN NNAKGASLAMVVRIYQLKDRQAFDNTDYPSLFAGDGQALQADRVAEKDVRLRPGESVTVD MPMETSAQFVAVAAMFIDPDLTQNSWRLVLTRDDLDPARPRIIEASQNQLTLHPLKEK >gi|289777623|gb|GG745508.1| GENE 735 831759 - 832202 560 147 aa, chain + ## HITS:1 COG:YPO1488 KEGG:ns NR:ns ## COG: YPO1488 COG3518 # Protein_GI_number: 16121761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 147 7 150 150 195 72.0 3e-50 MPRPSLYDILYGNFAGGLDLNTVSETDQVILSVLDNMQRILNCRAGTLAHLPDYGLPDMT AILQGMPASAHQLMSTLSAVLLKYEPRLQRIAVVMLDQHAPGELRYAIDAELKDIGLVRY GTEFMPEGRVLIRHLKRQQYLDARSAL >gi|289777623|gb|GG745508.1| GENE 736 832225 - 832794 631 189 aa, chain + ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 180 1 180 455 144 45.0 7e-35 MTTHDERHYKTGGDPRTLADFIALRAEMNKLSHPARPDINWPYAEQLARSLLEHHGADLQ TVAWYTLARARLGGLAGIHEGLSLMESLLAHQGKNLWPQALPARTEIFRTLSKRLRQVIR TLSLAPADLESLGQAERSLQSFDAVLQRLEIAPENPLSDLRALLHSTVSRFENLDPAPAL PHRAAGGGV >gi|289777623|gb|GG745508.1| GENE 737 832985 - 833608 392 207 aa, chain + ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 44 190 299 448 455 81 41.0 8e-16 MLAVTGIAVGGWLALRQSDLPPISVTQNVIPGLPGASPLMPVDLPQTQRQLGELARLAPD WAVSYGDQLVRQALSRWPDQAQPLAQQWRQQLSAAALPAENLTGWSEGMQQLQRLAGQLN ALDEQKGRYLTVSELKTALFAIMQSFNRAVPLEEELRQLAVLPVEQPWPAARGSLAELHL QQLIVEYALLKRKQSPPAEIPLPVSPR >gi|289777623|gb|GG745508.1| GENE 738 833757 - 834671 1078 304 aa, chain + ## HITS:1 COG:SMb20712 KEGG:ns NR:ns ## COG: SMb20712 COG1879 # Protein_GI_number: 16265167 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 16 303 15 309 309 253 50.0 3e-67 MKHCKIILLVGLLACSASALAEKIGVSMAYFDQNFLTIIRQSIEKEAQARHVDVQFEDAR GDTGRQADQVQSFIASGVDAIIVDPVDSASTPQLTKMAQQAKMPLVYVNRTPGDKTLPPG VVFVGSDERESGTLQMEALAKLANYKGNVAIMIGNLTDAGALQRTKDVEQVVAKYPAMKV VQKQPANYSRSEGMDLMQNWTGNGEAIDIVAANNDEMAIGAAMALEKSQKKLLIGGIDAT PDGLKALASDKIQVTVFQDAAGQGKTALAVALKLIKGEKVESHVWIPFELVTKENMQTYV EKSH >gi|289777623|gb|GG745508.1| GENE 739 834755 - 835084 123 109 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1938 NR:ns ## KEGG: Kvar_1938 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 109 1 109 109 168 100.0 8e-41 MATARSGYTLQVIKAGQQGHVEMRWGHLADVDTRAAAAAIVQQIGRPSSAASQQEISLSL TNAASGISVELHHPASGESATPAFIEGELKKIVQIVDGYEAAEETHIVE >gi|289777623|gb|GG745508.1| GENE 740 835166 - 836260 1550 364 aa, chain - ## HITS:1 COG:STM1784 KEGG:ns NR:ns ## COG: STM1784 COG0012 # Protein_GI_number: 16765125 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Salmonella typhimurium LT2 # 1 364 1 363 363 680 93.0 0 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRS LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA VESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA TAPQAAGKIHTDFEKGFIRAQTIAYEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNF LFNV >gi|289777623|gb|GG745508.1| GENE 741 836378 - 836962 611 194 aa, chain - ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 348 91.0 2e-96 MTIKLIVGLANPGAEYAATRHNAGAWYVDLLADRHRAPLREESKFFGYTSRINLAGEDVR LLVPTTFMNLSGKAVAAMATFYRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDI ISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPASEQKLIDDAVDEAARCTEIWLKDG LTKATNRLHAFKAQ >gi|289777623|gb|GG745508.1| GENE 742 837235 - 837510 317 91 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2343 NR:ns ## KEGG: Ent638_2343 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 91 1 91 91 164 89.0 1e-39 MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQLNLPQFFAHGAILSIFVGAVLWLAG ARIGGHEQVSDRYWWVRHYDKRCRRNQHRHS >gi|289777623|gb|GG745508.1| GENE 743 837731 - 838777 1119 348 aa, chain + ## HITS:1 COG:alr7637 KEGG:ns NR:ns ## COG: alr7637 COG0789 # Protein_GI_number: 17158773 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 1 110 1 114 137 75 36.0 2e-13 MLIQVGELAKRAGMTVRTLHHYEQTGLLTPSARSEAGYRLYNLSAVQRLHMIKALAQAGL TLATIKDYLDRQTLSLPELLTQQIETLNAQLRDVGRLRDRLLVLREALAGGNEPDLESWL QTLELMKMYDRWFSQQELAALPFAAQDEQRAQAWRELTEEVQTLMASGCPTDSPQAMSMA TRWMERLEQDTAGRPEFLTRLNEMHAAEPQMVEQTGVTPAIIAFITEAFAESKLAIWARY LDDEEMAFTRRHYFDRLQEWPALVAKLHQACREGVAPDSASGQALARAWLELFQSYAGTR PQTLQKFRRAMEQEPHLMKGTWMTPAVLSWLQQATGALMRQAQGPAAG >gi|289777623|gb|GG745508.1| GENE 744 838778 - 840430 2445 550 aa, chain - ## HITS:1 COG:STM1781 KEGG:ns NR:ns ## COG: STM1781 COG0659 # Protein_GI_number: 16765122 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Salmonella typhimurium LT2 # 1 550 2 551 553 874 91.0 0 MPFRALIDACWKEKYTTARFTRDLIAGITVGIIAIPLAMALAIGSGVPPQYGLYTSAVAG IVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGIFLILFGLARFGRLIE YIPLSVTLGFTSGIGITIGTMQIKDFLGLQMPHVPEHYLQKVAALAMALPTINPGDAAIG VVTLGTLLLWPRLGIRLPGHLPALLAGCAVMLVVNLLGGDVATIGSQFHYQLADGTQGNG IPQLLPQLVLPWDMPGSNFTLSWTSLHALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHK ANSELIGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPVAAVIHALLVILALLILAP LLSWLPLSAMAALLLMVAWNMSEAHKVINLLRHAPKDDIVVMLMCMSLTVLFDMVIAISV GIVLASLLFMRRIARMTHLAPVNVEVPDDVLVLRVIGPLFFAAAEGLFNDLETRIAGKRI VVLKWDAVPVLDAGGLDAFQRFVNKLPEGCELRVSNLEFQPLRTLARAGVKPLPGRLSFY PDRQAALADL >gi|289777623|gb|GG745508.1| GENE 745 840708 - 841655 967 315 aa, chain - ## HITS:1 COG:STM1780 KEGG:ns NR:ns ## COG: STM1780 COG0462 # Protein_GI_number: 16765121 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Salmonella typhimurium LT2 # 1 315 1 315 315 577 96.0 1e-164 MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTC APTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSV GVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVRARAI AKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVMVDDMIDTGGTLCKAAEALKERG AKRVFAYATHPIFSGNAIQNIKNSVIDEFVVCDTIPLAPEIKALDKVRTLTLSGMLAEAI RRISNEESISAMFEH >gi|289777623|gb|GG745508.1| GENE 746 841839 - 842687 683 282 aa, chain - ## HITS:1 COG:STM1779 KEGG:ns NR:ns ## COG: STM1779 COG1947 # Protein_GI_number: 16765120 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 282 2 283 283 484 86.0 1e-137 MSRWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTLTIEPRTDGQLRLLTPVAGVP DEENLIVRAARLLMRAASESDRLPAGSGADISVDKRLPMGGGLGGGSSNAATVLVALNHL WGCGLSEEELATLGLQLGADVPVFVRGHAAFAEGVGEILTPVEPEEKWYLVAHPGVSIPT PVIFRDPELPRNTPRRSINTLLNCEFSNDCELIARKRFREVDAALSWLLEYAPSRLTGTG ACVFAEFNTESAARQVLDTAPAWLNGFVARGVNLSPLKQALL >gi|289777623|gb|GG745508.1| GENE 747 842687 - 843298 829 203 aa, chain - ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 3 203 7 207 207 339 82.0 2e-93 MNRLFRLLPLASLVLTACSLHTPQGPGKSPDSPQWRQHQQAVRSLNQFQTRGAFAYLSDE QKVYARFFWQQTGQDRYRLLLTNPLGSTELSLTAQPGSVQLIDNKGQTYTATDAEEMIGR LTGMPIPLNSLRQWIIGLPGDATDYSLDDQYRLRELNYTQNGKTWHVTYGGYTSDTQPAL PSNVELNNGAQRIKLKMDNWIVK >gi|289777623|gb|GG745508.1| GENE 748 843570 - 844826 1712 418 aa, chain + ## HITS:1 COG:ECs1715 KEGG:ns NR:ns ## COG: ECs1715 COG0373 # Protein_GI_number: 15830969 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 684 92.0 0 MTLLALGINHKTAPVDLRERVTFSPETLDQALESLLAQPMVQGGVVLSTCNRTELYLSVE EQDNLQEALIRWLCNYHGLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQ VKKAFADSSRGHLNVSELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESL SSVTVLLVGAGETIELVARHLREHHVRKMVIANRTRERAQVLADEVGAEVIALSDIDERL KEADIIISSTASPLPIIGKGMVERALKARRNQPMLLVDIAVPRDVEPEVGKLANAYLYSV DDLQNIIQHNLAQRKAAAVQAESIVEQETSEFMAWLRAQSASETIREYRSQSEQVREELT AKALAALEQGGDAQEIMQDLARKLTNRLIHAPTKSLQQAARDGDDERLHILRNSLGLE >gi|289777623|gb|GG745508.1| GENE 749 844869 - 845951 1469 360 aa, chain + ## HITS:1 COG:STM1776 KEGG:ns NR:ns ## COG: STM1776 COG0216 # Protein_GI_number: 16765117 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 600 92.0 1e-171 MKSSIVAKLEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQE DIETAQMMLDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTG GDEAALFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGKLDMLIEPIVQEYQADQLAALSEQE >gi|289777623|gb|GG745508.1| GENE 750 845948 - 846799 511 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 1 275 16 289 294 201 43 9e-50 MMTFQAWLQQAIARLRESDSPRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALL QRRQRGEPIAHLVGQREFWSLPLFVSPATLIPRPDTECLVEQALARLPAAPCHILDLGTG TGAIALALASERPDCEVTAVDVMPDAVALALRNAAHLDIANVTIRQSDWFSALAGQRFAM IVSNPPYIDAADPHLAEGDVRFEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHG WTQGEAVRALFREAGYLDVATCRDYGDNERLTLGRLPDMENVG >gi|289777623|gb|GG745508.1| GENE 751 846799 - 847191 331 130 aa, chain + ## HITS:1 COG:ychQ KEGG:ns NR:ns ## COG: ychQ COG3094 # Protein_GI_number: 16129176 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 130 1 130 130 127 58.0 4e-30 MNLFTAVLYLHIASVVVSVGLFVLRYWWMYHQSPLLNQRWVRIAPHCSDTLLFLSGAGLM AITHYLPFTEDGAWLTEKLFGVIIYIALGFIALGRRRPRSQQSRFIAFLLALVVLFIIIQ LAITRIPILG >gi|289777623|gb|GG745508.1| GENE 752 847195 - 848007 1214 270 aa, chain + ## HITS:1 COG:STM1773 KEGG:ns NR:ns ## COG: STM1773 COG2912 # Protein_GI_number: 16765114 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 270 1 269 269 421 81.0 1e-117 MGSLADFEFNKAPLCDGMVLISEQVRDDFPSRFVEEELQRLLRLAQEEIAPSWDQERQIE RLLALFYDEWGFGASQGIYRLSDALWLDKVLVNRQGSAVSLGAILLWIAQRLALPVVPVI FPTQMLLRADPETSEEMWLINPFNGETLDEHTLEVWLKGNIGPVAELFNEDLDEADNAEV IRKLLDTLKSALMEERQMELALRASEALLQFNPEDPYEIRDRGLIYAQLDCDHVALLDLS YFVEQCPEDPISEMIRAQINTISHKQITLH >gi|289777623|gb|GG745508.1| GENE 753 848047 - 848901 1331 284 aa, chain + ## HITS:1 COG:kdsA KEGG:ns NR:ns ## COG: kdsA COG2877 # Protein_GI_number: 16129178 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Escherichia coli K12 # 1 284 1 284 284 545 95.0 1e-155 MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEASQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDKVILCDRGANFGYDNLVVD MLGFGVMKKASNNSPVIFDVTHALQCRDPFGAASGGRRAQVSELARAGMAVGIAGLFIEA HPDPDHAKCDGPSALPLDKLEPFLKQMKAIDDLVKSFDELDTSK >gi|289777623|gb|GG745508.1| GENE 754 848989 - 850089 1690 366 aa, chain - ## HITS:1 COG:STM1771 KEGG:ns NR:ns ## COG: STM1771 COG0387 # Protein_GI_number: 16765112 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 585 93.0 1e-167 MTHAHEAVKTRHKESSLVFPVLALAVLFFWGSSQSLPVVIAINILALVGILSSAFSVVRH ADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVG FSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPGANFSTGQSLLVAVISAA MYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSGWHTAWLLVHLVAVIAVTKM NANPLETLLTSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATIS LTVPVVTLIAFLTGNELRFGLGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAY LMTIFA >gi|289777623|gb|GG745508.1| GENE 755 850353 - 850583 328 76 aa, chain + ## HITS:1 COG:ECs1722 KEGG:ns NR:ns ## COG: ECs1722 COG4572 # Protein_GI_number: 15830976 # Func_class: R General function prediction only # Function: Putative cation transport regulator # Organism: Escherichia coli O157:H7 # 1 75 1 75 76 88 82.0 3e-18 MPYRNKQELPDSVQHVLPAHAQEIYKEAFNSAWDQYKDKDERRDDASREETAHKVAWAAV KNSYEKGDDDKWHKKK >gi|289777623|gb|GG745508.1| GENE 756 850720 - 851400 738 226 aa, chain + ## HITS:1 COG:chaC KEGG:ns NR:ns ## COG: chaC COG3703 # Protein_GI_number: 16129181 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli K12 # 1 225 8 232 238 383 83.0 1e-106 MLTRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGSVWIFGYGSLIWNPA LNYRESCTGTLPGWHRAFCLRLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDDTLEEEL TLLWKREMITGCYLPTWCKLELDDGRTVNALVFIMDPRHPLFEPDTSAQVIAPLIARASG PLGTNAQYLFSLEQALSKLGMHDASLDDLVASVRALLGESPTPGLA >gi|289777623|gb|GG745508.1| GENE 757 851618 - 851860 235 80 aa, chain - ## HITS:1 COG:no KEGG:KP1_3339 NR:ns ## KEGG: KP1_3339 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 80 29 108 108 154 100.0 1e-36 MAMVKASLTLFGGDTLVVRCSERCHIHLMSAKVPGDSHADILSVQDRDSAYLTVPYSGTW NVLIDSHSQSLEHSISYVPA >gi|289777623|gb|GG745508.1| GENE 758 852099 - 852452 642 117 aa, chain - ## HITS:1 COG:STM1769 KEGG:ns NR:ns ## COG: STM1769 COG1553 # Protein_GI_number: 16765110 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Salmonella typhimurium LT2 # 1 117 1 117 117 208 92.0 2e-54 MQRIVIIANGAAYGSESLFNSLRLAIALREQQSDLDLRLFLMSDAVTAGLRGQKPAEGYN VQQMLEILTAQQVPVKLCKTCADGRGVSALPLIDGVEVGTLVELAQWTLAADKVLTF >gi|289777623|gb|GG745508.1| GENE 759 852521 - 853702 1429 393 aa, chain + ## HITS:1 COG:lin1136 KEGG:ns NR:ns ## COG: lin1136 COG3707 # Protein_GI_number: 16800205 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Listeria innocua # 301 382 106 190 193 63 40.0 7e-10 MNNTTGHAHDETAWLQLARRLQKQQLQQLSQLGELASQLSALVHMLQCERGASNIFLCSG GQLYAAECRAGGALVDERLALFYASLERARTVAGSALCWRIARAVGDLLQLPALREQIAR RQIAAEAATEQFSRVIRHLLNIVPQLNDSIDDPPVAGRMVALYSFMQGKELVGQERALGA LGFTRGEFSDSLRQQLVDRIDGQQPCFDSFQALGSPATVQLFITQCQAGLDIEQLRRIAC TRQPAADGGETALRWFGLQTQRLEHLREVEEQLIDDLLNATDALLVDDAPGWLAGEEVDT LTPHLDKQLLPLVRQQAYELQQLSSQLASLKDALEERKLIEKAKSLLMTHQGMQEEQAWQ TLRKMAMDKNQRMVEIARALLMVKAIWPLTPKE >gi|289777623|gb|GG745508.1| GENE 760 853944 - 855200 1555 418 aa, chain + ## HITS:1 COG:RSc0381 KEGG:ns NR:ns ## COG: RSc0381 COG0715 # Protein_GI_number: 17545100 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Ralstonia solanacearum # 9 414 14 419 420 473 58.0 1e-133 MSDKFSISRRRLLQAGAALGGAMLLPGVMQAAWAGGSDKPEQTRVRVGFIPLTDCAPLAI AAAKGFDKKYGITLVASKEASWAAVRDKLVAGELDAAHILYGLLYGLELGIASKPQAMAN LMTLNRNGQAITLSGELQEKGVTDLGGLKRLIDRSAPGSYTFAHTFPTGTHAMWLYYWLA SAGIDPFNDVRTVVVPPPQMVMNMRIGNMSGFCVGEPWNARAINDRIGFTAATSQDIWPE HPEKVLGTRRDWVERNPNTARALVAALMEAQRWIAASPENTQETARLLARRGLLNTKEQY LTGRMLGEYDNGLGRRWQDAHPMRFWAGGEVSFPWLSDGMWFLTQFRRWGLLKQAPDYLA VASRINRIDVWQAAAQAVGGISTPAATMRNSTLMDGTVWNGSDPEGYARHFAIQRKGA >gi|289777623|gb|GG745508.1| GENE 761 855202 - 856086 1457 294 aa, chain + ## HITS:1 COG:RSc0380 KEGG:ns NR:ns ## COG: RSc0380 COG0600 # Protein_GI_number: 17545099 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Ralstonia solanacearum # 33 291 26 284 287 321 66.0 8e-88 MKQAQRKQPVVSVENAPGEVIILPPVQVRRTTPTVTRWLRELIQRLLPPLLGLGVLLLAW QLAAMHSKGFPTPLSTLDSALTLFADPFYQDGPNDMGIGWNVLASLQRVAVGFGLAALAG IPLGFLIGRSLFFARMFNPLIALLRPVSPLAWLPIGLLLFQKAEPASSWTIFICSIWPMV INTAEGVRRIPQDYLNVARVLQLSEWTVMRKILFPAVLPAVLTGVRLSIGIAWLVIVAAE MLTGGLGIGFWIWNEWNNLNVENIIIAIVIIGVVGLLLEQGLMLLARRFSWQDK >gi|289777623|gb|GG745508.1| GENE 762 856096 - 856884 994 262 aa, chain + ## HITS:1 COG:RSc0379 KEGG:ns NR:ns ## COG: RSc0379 COG1116 # Protein_GI_number: 17545098 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Ralstonia solanacearum # 4 262 5 263 268 338 63.0 8e-93 MKPLIQVQAVSQRFNTASGEFLALQNVSFDIVEGETISLIGHSGCGKSTLLNLIAGITTP TEGGLLCDNREIAGPGPERAVVFQNHSLLPWLSCFDNVALAVDQVFRRTMSKSERREWIE HNLARVQMGHALHKRPGEISGGMKQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDT VMHIQQELNTTIVMITHDVDEAVLLSDRVLMMTNGPAATVGEILAVDLPRPRHRVQLADD SRYHHLRQQILHFLYEKQPKAA >gi|289777623|gb|GG745508.1| GENE 763 856895 - 860962 4704 1355 aa, chain + ## HITS:1 COG:RSp1222 KEGG:ns NR:ns ## COG: RSp1222 COG1251 # Protein_GI_number: 17549443 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Ralstonia solanacearum # 397 1242 1 842 852 1045 62.0 0 MTRRLVVIGNGMAATRLVQRLVERDPAQFAITVVGDEPHLAYNRIQLSPLLAGEKTAAQL PLLPAEWYTRHGVCLRSGEAVDEVDVEQRRLRIAETWLPWDELVFATGSRPFIPPLPGRD RPQVIPFRTLADVERILAIPGPAVVIGGGVLGVEAAAALRRHGGEVTLMHRGSGLMAPLT DAFAADELRQQLEARGIRCVLECRIAAIEEDGVRLADGRAFRADRVVLAAGVQPNSRLAA QSGVLCQRGIVVDRQMAASLPGISAVGECCEIDGQTWGLVAPCLRQAEVLADRLCGAPGE GFVWQDAGTRLKVTGIELFSVGEQQAGEQDDIYTSWDPIDRHYRRLLLRDGRLRGVLLMG DCTAAAALTARLESDEPATADWLFDPSSTQPQAAGIMTMTKPVLVLVGHGMVGHHFLEQC VSRNLHQQYRIVVFGEERYAAYDRVHLSEYFAGRSAQSLSLVADDFFHQHGIELRLGEAV ATIDRDARLVRDAEGHETHWDKLVLATGSYPFVPPIPGNDLDGCFVYRTLDDLDRIAAHA AAAKTGVVIGGGLLGLEAANALKQLGLDTHVVEFAPNLMAVQLDNGGAAMLREKIVALGV GVHTSKATTAIVSEADGLRLNFADGGALRTDMVVFSAGIRPQDALARGCMLQVGERGGIH IDGQCRTSDPDVLAIGECALWDNKIYGLVAPGYQMARIAAATLAGEDACFSGADMSTKLK LLGVDVASFGDAQGRTPGCQSYQWTDGPQQVYKKIVVSQDGKTLLGGVLVGEASDYATLL QMMLNGMALPPRPESLILPALEGAAPKALGVAALPDSAPICSCHNVSKGDICQAVNNGAG DMAAIKSCTRAATGCGGCSALVKQVMEYQLAEQGVEVKKDVCEHFPWSRQEIYHLVRVNH IHTFEQLISRYGQGHGCDVCKPLVASVLASCWNEYLLKPAHLPLQDTNDRYFANIQKDGT YSVVPRMAAGEVTPDGLIAIGQIAKRYQLYSKVTGGQRIDLFGARLEQLPAIWRELADAG FETGHAYGKSLRTVKSCVGSTWCRYGVQDSTGLAVRLEHRYKGLRAPHKIKMAVSGCTRE CAEAQGKDIGVIATDKGWNLYVCGNGGMKPRHADLFASDLDEATLIRSIDRLLMFYIRTA DRLQRTSTWMDNLEGGVAYLRQVVLEDSLGIGEELEQEMARIVDSYQCEWQTTLNDPQRL ALFRSFVNSDQPDEAVQRHELRGQPQLLLTETLPEGELPSRPWQAVCDLDAIPAQAGIGA RLGERQIALFRFGDRVYALDNREPGSAANVLSRGLLGDVGGEPVVISPLYKQRIRLRDGW PCDGSEQAVRAWPVKVENGKVWVGSQQLLARAEAS >gi|289777623|gb|GG745508.1| GENE 764 860962 - 863568 2702 868 aa, chain + ## HITS:1 COG:AGl1895 KEGG:ns NR:ns ## COG: AGl1895 COG0243 # Protein_GI_number: 15891062 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 859 27 894 903 828 51.0 0 MQTIRTTCPYCGVGCGVLASVDDAGQVSVRGDDQHPANLGRLCVKGAALGETTGLAGRLL APEVDGQQVAWPQALAETAARLQQVIDQHGPQAVAFYASGQLLTEDYYAANKLMKGFIGA ANIDTNSRLCMSSAVTGYKRAFGADVVPCSYEDVENSDLVVLVGSNAAWAHPVLFQRLAQ AKRDNPRLRIVVIDPRRTATCEIADRHLALAPGSDGGLFVGLLNAVAQAGACIDGFRDGS QALAEARGWDVAKVADFCGLTVDEVAAFYREFIAAPRAITLYTMGINQSASGSDKCNAII NVHLASGKYGRPGCGPFSLTGQPNAMGGREVGGLATMLAAHMDFVPDDLQRLARFWGTER LAQTPGLTAVELFAAIGRGEVKAVWIMGTNPVVSLPDSHAVSQALAACPLVIVSDVAAQT DTGHFAHIRFPALAWGEKNGTVTNSERRISRQRSFLPPPGEAKADWWIIARVGQALGYRE AFAWQHPHDVFREHAALSGFENDGQRAFDIGALADLSREAWDAMAPVRWPVSRSEAAWDI ARGWHGDGRLRMVPVTPQPTRATTDVFYPLILNSGRIRDQWHTMTRTGAVPRLMQHIAEP VVEVTPQDAVRYQLPADGLARIWSRHGVMVAKVTISEGQRPGSLFVPMHWNNQFARQGRV NNLLTAVTDPYSGQPESKQAAVAIAAWQPAWHSELFCREPLPFPAAWHWRQRAAPGVLHY SLAGEVSARQWISAWCARRGWQLQVADGGAVWNLLAWHQGRLMLGWWSDAREPAVDSAWI SAAFAAPPSDAVQRHALLSGRPGAAVAPRGRIVCSCFGVGERSINEAIASGCASVGALGG KLKCGTNCGSCVPELNALLAAQRTRTQA >gi|289777623|gb|GG745508.1| GENE 765 863720 - 865102 1416 460 aa, chain + ## HITS:1 COG:no KEGG:KPK_2090 NR:ns ## KEGG: KPK_2090 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 5 460 3 458 458 900 99.0 0 MPVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAPAQDPLPDMGIAPQVDDDARHFAEVA KKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGS KGSWFVPLQDNDRYLTWNQYSVTRRENDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESL ARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTS VSVEQYFGDSVDLFHTGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKL NYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQS GETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSADGWSVIMPVWNSEPGAANRWR LSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP >gi|289777623|gb|GG745508.1| GENE 766 865099 - 865749 1045 216 aa, chain - ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 328 94.0 7e-90 MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDL NMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL QQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRL DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF >gi|289777623|gb|GG745508.1| GENE 767 865760 - 867538 1981 592 aa, chain - ## HITS:1 COG:STM1766 KEGG:ns NR:ns ## COG: STM1766 COG3850 # Protein_GI_number: 16765107 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Salmonella typhimurium LT2 # 1 590 1 590 598 918 80.0 0 MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRL LAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEQQLKALQQYWQQALAPGMQRAVNQ AEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLR PWKQLLGMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAG LEQKNEILAFLWQANRRLHASAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEF TCHSDDECDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHNQYGILLATLPVGRHLSHDQQQ LVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG DALPAESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTV QLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRG VPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ >gi|289777623|gb|GG745508.1| GENE 768 867850 - 869238 1908 462 aa, chain + ## HITS:1 COG:STM1765 KEGG:ns NR:ns ## COG: STM1765 COG2223 # Protein_GI_number: 16765106 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Salmonella typhimurium LT2 # 1 459 1 459 465 706 87.0 0 MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAV NLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIIPCVWLG FAVQDTSTPFSVFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSV MQLVAPLVVSVSVFAIFGGTGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSAS KASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFI GALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFL TAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFF IPKAFGISLDLTGSPAGAMKIFLIFYIACVIITWAVYGRKRQ >gi|289777623|gb|GG745508.1| GENE 769 869642 - 873385 5149 1247 aa, chain + ## HITS:1 COG:ECs1729 KEGG:ns NR:ns ## COG: ECs1729 COG5013 # Protein_GI_number: 15830983 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli O157:H7 # 1 1247 1 1247 1247 2468 93.0 0 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMK MWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKT YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQ GTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASD LVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSL LGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMA NYGLERGLNDENCATGYDDMKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMII VGAGLNHWFHLDMNYRGLINMLVFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ RPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAP QLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGS SGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTC LYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWDIYKGIAKKFSEVCVG HLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERF TSIGPLLETIGNGGKGIVWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLA PETNGQVAVKAWKALSEITGREHAHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEH VSYNAGYTNVHELIPWRTLSGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSN GNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFN ANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIG GYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK >gi|289777623|gb|GG745508.1| GENE 770 873382 - 874917 2031 511 aa, chain + ## HITS:1 COG:STM1763 KEGG:ns NR:ns ## COG: STM1763 COG1140 # Protein_GI_number: 16765104 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Salmonella typhimurium LT2 # 1 511 1 511 511 1066 96.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQE KWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQ PIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLP RLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKS EKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFL DPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETV DGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFG DGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA >gi|289777623|gb|GG745508.1| GENE 771 874914 - 875624 983 236 aa, chain + ## HITS:1 COG:STM1762 KEGG:ns NR:ns ## COG: STM1762 COG2180 # Protein_GI_number: 16765103 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Salmonella typhimurium LT2 # 1 236 1 236 236 376 88.0 1e-104 MIELVIMSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQS AYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEY LAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIAD EARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ >gi|289777623|gb|GG745508.1| GENE 772 875624 - 876301 1026 225 aa, chain + ## HITS:1 COG:STM1761 KEGG:ns NR:ns ## COG: STM1761 COG2181 # Protein_GI_number: 16765102 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Salmonella typhimurium LT2 # 1 224 1 224 225 408 95.0 1e-114 MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL GIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRA TTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGV AFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR >gi|289777623|gb|GG745508.1| GENE 773 876298 - 877194 193 298 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020671|ref|YP_526498.1| ribosomal protein S6 [Saccharophagus degradans 2-40] # 1 275 9 279 293 79 25 7e-13 MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVMDVVFWRCLIGALTLLVFIVLSGQPFSRL TRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVK WGWLLLAFGGVVILLSSELTSAHGEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIA FIQVLVGVVMLLPLVHAPEWTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPITGSLS FIYPLVAMVVDYLVFHHALTPVQLIGGMLILFAAAGNNLGWGEKKPRRGGVSEQSQAS >gi|289777623|gb|GG745508.1| GENE 774 877302 - 877745 485 147 aa, chain + ## HITS:1 COG:SMc00425 KEGG:ns NR:ns ## COG: SMc00425 COG1522 # Protein_GI_number: 15964097 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 4 147 1 144 145 173 62.0 8e-44 MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNL AALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTL LDGLAEYAQCNTSVVKSSPVKRRLPPL >gi|289777623|gb|GG745508.1| GENE 775 878586 - 879428 1036 280 aa, chain - ## HITS:1 COG:ECs1734 KEGG:ns NR:ns ## COG: ECs1734 COG0788 # Protein_GI_number: 15830988 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 539 94.0 1e-153 MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFND AILLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGN HDTLRPLVERFGIPFELVSHEGLSREEHDKQMGDAIAAHEPDYVVLAKYMRVLTPEFVAR FPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHT YTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL >gi|289777623|gb|GG745508.1| GENE 776 879471 - 879929 220 152 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 127 3 131 134 89 39 5e-16 MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQ TFRAELEKGFSQTEWLGLTLFASDEGRVPNEGFVSFVARFNDNNRPGAIIERSRFLKENG QWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ >gi|289777623|gb|GG745508.1| GENE 777 880042 - 880944 503 300 aa, chain + ## HITS:1 COG:STM1754 KEGG:ns NR:ns ## COG: STM1754 COG1752 # Protein_GI_number: 16765098 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Salmonella typhimurium LT2 # 1 300 1 301 301 507 80.0 1e-143 MRKLKIGLALGAGAARGWSHIGVINALRRAGIEIDIVAGCSIGSLVGAAYACNRLPALES WICSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTDIERCERRFAAVATNLSTGR ELWFTEGDLHLAVRASCSMPGLMAPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDL QHDAHLMQQDLFSLETPRPEAEEKEGPWHTRLRARLTQMSSRRTAVTPTAMEIMTTSIQV LENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV >gi|289777623|gb|GG745508.1| GENE 778 881034 - 882047 695 337 aa, chain + ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 134 1 134 134 218 80.0 2e-56 MTQPLAGKQILIVEDEPVFRSLLHGWLASLGATTWLAEDGMDALHKMTEVRPDLMICDIS MPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETV YACLYPAMFSSRVEEEERLFEDWDALVSNPTAASRLLQELQPPVQQEMSHCRIHYRQLVS ADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNSLLQEQLAHQGQRLPE MGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVP LGTLGDAYLNQISQRCASWQCQIWGAGGRLRLMLSAE >gi|289777623|gb|GG745508.1| GENE 779 882245 - 883147 923 300 aa, chain + ## HITS:1 COG:STM1752 KEGG:ns NR:ns ## COG: STM1752 COG1210 # Protein_GI_number: 16765096 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 1 295 1 295 302 550 94.0 1e-156 MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLV THSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVL CAHPVVGDEPVAVILPDVILDEFESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGV VDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQ LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVTK >gi|289777623|gb|GG745508.1| GENE 780 883270 - 883677 432 135 aa, chain - ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 135 1 135 137 188 94.0 2e-48 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQ YREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIK KAMDEQGKSLDDFLI >gi|289777623|gb|GG745508.1| GENE 781 884238 - 884855 489 205 aa, chain + ## HITS:1 COG:ECs1740 KEGG:ns NR:ns ## COG: ECs1740 COG1435 # Protein_GI_number: 15830994 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Escherichia coli O157:H7 # 1 201 1 201 205 359 88.0 2e-99 MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTIVYTAEIDDRFGAGKVSSRIGLSSPAR LYNPQTSLFNDIAAEHKLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDF RGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVS VCRKHYKEALSVGSLTQVQNQRYSC >gi|289777623|gb|GG745508.1| GENE 782 884993 - 887668 2718 891 aa, chain - ## HITS:1 COG:ECs1741_2 KEGG:ns NR:ns ## COG: ECs1741_2 COG1454 # Protein_GI_number: 15830995 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 448 872 1 425 444 849 97.0 0 MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNA LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTF DNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQP AAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVTKAEKLV AMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHK RALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSG TGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALE AYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLG VCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQ CTGANPRYPLISELKQILLDTYYGREFVEGETAAKTDAAPVKAEKKAKKSA >gi|289777623|gb|GG745508.1| GENE 783 887746 - 887961 88 71 aa, chain + ## HITS:1 COG:no KEGG:KPK_2110 NR:ns ## KEGG: KPK_2110 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 71 1 71 71 127 100.0 1e-28 MHVNVYVEKSGHCFTDLLKKLYYFNFQVMLPSTLLVSSRLLTSEYKIRDLDQVLAWLIPF SWLLFNRFDQV >gi|289777623|gb|GG745508.1| GENE 784 888145 - 888792 493 215 aa, chain + ## HITS:1 COG:STM1748 KEGG:ns NR:ns ## COG: STM1748 COG2095 # Protein_GI_number: 16765092 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 1 215 1 215 215 353 91.0 2e-97 MTQPLFDFATYFKFFIGLFALVNPVGIIPVFISMTSYQPAAVRNKTNLTANLSVAIILLT SLFLGDGILQIFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGV VPLALPLMAGPGAISSTIVWGTRYHSWVHLVGFSLAIAVFALCCWGIFRMAPWLVRLLGQ TGINVITRIMGLLLMALGIEFIVTGIKALFPGLLN >gi|289777623|gb|GG745508.1| GENE 785 889539 - 891173 2147 544 aa, chain + ## HITS:1 COG:ECs1743 KEGG:ns NR:ns ## COG: ECs1743 COG4166 # Protein_GI_number: 15830997 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 544 1 543 543 930 84.0 0 MTIITKKRLIAAGVLSALLAGNMAMAADVPAGVQLSDKQTLVRNSGAEPQSLDPNKIEGV PEANISRDLFEGLLNTSPKDGHPIPGVAESWDNKDFKVWTFHLRKDAKWSNGEPVTAQDF VYSWQRLVDPKTASPYASYPQYGHIVNVDDIIDGKKAPSELGVKAIDDHTLEVTLSEPVP YFYKLLVNPAMSPVYKPAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVMERNPHYWDN AKTVINTVTWLPTSSEVTYVNRYRSGELDMTYNQLPIELFQKLKKEIPNELHVDPYLCTY YYEINNQKAPFTDVRVRTALKLGLDRDIIANKVKGQGDLPAYGYTPPYTDGAKLSEPEWF TWSQEKRNEEAKKLLAEAGYTADKPLTFNLLYNTSDLHKKLAIAAASLWRKNLGIDVKLV NQEWKTFLDTRHQGTYDVARAGWCADYNEPTSFLNTMLSDSSMNTAHYKSPAFDKIMAES VKASDEAQRTAAYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPMDNVYTKDLY VIKH >gi|289777623|gb|GG745508.1| GENE 786 891259 - 892179 1224 306 aa, chain + ## HITS:1 COG:ECs1744 KEGG:ns NR:ns ## COG: ECs1744 COG0601 # Protein_GI_number: 15830998 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 535 96.0 1e-152 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM TQYFNYLKQLAHGDFGPSFKYKDYSVNDLVAASFPVSAKLGFAAFLLAVVIGVAAGVIAA LKQNTRWDYAVMGVAMTGVVIPSFVVAPLLVMIFAITLHWLPGGGWNGGALKFMILPMVA LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI DPKIRY >gi|289777623|gb|GG745508.1| GENE 787 892197 - 893102 1511 301 aa, chain + ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 301 2 302 302 507 95.0 1e-144 MLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVSS FSYFDTDWGMMSNAPDMASGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGTL YGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMAR IVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFLS FLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKD R >gi|289777623|gb|GG745508.1| GENE 788 893114 - 894127 581 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 29 317 28 311 329 228 41 7e-58 MTMIETAKAPQAQSHSGLLLDVKDLRVTFKTPDGDVTAVNDLNFTLQAGETLGIVGESGS GKSQTAFALMGLLAANGRIGGSATFNGRQILNLPERELNKLRAEQISMIFQDPMTSLNPY MRVGEQLMEVLMLHKGLSKAEAFEESVKMLDAVKMPEARKRMKMFPHEFSGGMRQRVMIA MALLCRPRLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL VMYAGRTMEYGQARDVFYQPSHPYSIGLLNAVPRLDAEGDALLTIPGNPPNLLRLPKGCP FQPRCPHAMEQCSSAPPLESFAPGRLRACFKPVGDLL >gi|289777623|gb|GG745508.1| GENE 789 894124 - 895128 864 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 337 51 1e-90 MNAVTEQRKVLLEIADLKVHFDIKDGKQWFWQPSKTLKAVDGVTLRLYEGETLGVVGESG CGKSTFARAIIGLVKATDGKVAWLGKDLLGMKQEEWRDVRSDIQMIFQDPLASLNPRMTI GEIIAEPLRTYHPKMSRQEVRDRVKAMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPLHPYTKALMSAVPIPDPDLEKAKTIQLLEGELPSPINPPSGCVF RTRCPLAGPECAKTRPVLEGSFRHAVSCLKVDPL >gi|289777623|gb|GG745508.1| GENE 790 895177 - 896010 906 277 aa, chain + ## HITS:1 COG:STM1741 KEGG:ns NR:ns ## COG: STM1741 COG1226 # Protein_GI_number: 16765085 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Salmonella typhimurium LT2 # 4 276 5 277 278 430 78.0 1e-120 MGMLSAARLRLYHLLFDQNRRSGRRFEGLCGLFALLSVLVIFIESGLGTQYHLTLDEWHV FVWLELLVTAVFTVEYLLRIATWPNPLHYIFSFWGLIDLATILPLYVMWLWPEISLNYVF AWRAMRAIRALRILKLLRFMPSLNVFWRAIVSARHQLILFYSFIAIVMVIFGSLMYLIEG PEYGFTTLNASVYWAIVTITTVGYGDITPHTPLGRILASILILIGYSIIAIPTGLITTHM TSALNRRRQRRLCPQCKQGDHDDNARFCHACGHALPK >gi|289777623|gb|GG745508.1| GENE 791 896074 - 896403 583 109 aa, chain - ## HITS:1 COG:yciU KEGG:ns NR:ns ## COG: yciU COG3099 # Protein_GI_number: 16129209 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 109 27 135 135 192 88.0 2e-49 MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADIILFNLQFEERGGAELFDPSADWEEH VDYDLNPDFFAEVVIGLADTDGGEINDIFARVLLCREKDHKLCHILWRE >gi|289777623|gb|GG745508.1| GENE 792 896438 - 897898 1635 486 aa, chain - ## HITS:1 COG:STM1739 KEGG:ns NR:ns ## COG: STM1739 COG1502 # Protein_GI_number: 16765083 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 1 486 1 486 486 947 94.0 0 MTTFYTVVNWLVILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEDNSPVAESLFKLCERRQGIGGVKGNQ LQLLTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADSVAESLMAAARRGVHCRLMLD SAGSVAFFRSPWAAMMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMVMIDNYIAYTGSM NMVDPRYFKQDSGVGQWIDLMARMEGPVATSMGIVYSCDWEIETGKRILPPPPDVNIMPF EEASGHTIHTIASGPGFPEDLIHQALLTAAYAAKEHLIMTTPYFVPSDDLLHAICTAAQR GVDVSIILPRKNDSLLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV NLDMRSLWLNFEITLVIDDAGFGSDLAAVQDDYISRSRLLDARRWLKRPLWQRIVERLFY FFSPLL >gi|289777623|gb|GG745508.1| GENE 793 898042 - 898215 96 57 aa, chain + ## HITS:1 COG:no KEGG:KP1_3300 NR:ns ## KEGG: KP1_3300 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 56 38 93 94 77 100.0 1e-13 MKRSRTEVGRWRMLRQVNRRKARWLEAQSRRNMRILAIRKGLVKRQRHALLFIFPDC >gi|289777623|gb|GG745508.1| GENE 794 898684 - 899262 499 192 aa, chain - ## HITS:1 COG:XF1840 KEGG:ns NR:ns ## COG: XF1840 COG2353 # Protein_GI_number: 15838438 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 21 189 58 226 237 154 46.0 1e-37 MNVLKKTAFLSLLALYIPVSQAAATEYNLDPQHTSVVIAWNHFGFSNPTAYISDVSGKLS FDKENPEKSSVSVTLPVKTIDTHVKALTDEFLGKEYFDVKTFPEATFRSTKVESKGDNKY DVEGNLTIKGITKPVVLHATLNKQDMHPMVKKEAIGFDATGVIKRSDFKLDKYVPAVSDN VTITLSTEAYAK >gi|289777623|gb|GG745508.1| GENE 795 900043 - 902472 1747 809 aa, chain + ## HITS:1 COG:AGl2936 KEGG:ns NR:ns ## COG: AGl2936 COG4993 # Protein_GI_number: 15891579 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 807 14 807 809 1109 69.0 0 MSNTNPRSSGWLGLWCLLVGVILLATGLFFVIGGYKLVSLGGSWYFLIAGVITLLAAIQF FRRRSSAVWLFALVFVGTLIWALFDAGFDFWPLVSRLMVPAGLMLLAAATWPALRKHEGK PYSTKGAWGVCVVLVIAMGVTFVQMFQPHPTVAFSGEKLPLVPVKEDAKQQNWDHYGNTA GGSRFVALDQITRDNVKNLKPVWTFHTGDTPLSPDGNGAEDQQTPLQVGDRVFLCTPHNN VIAVDADSGKEIWRAEINAKSAIWMRCRGLAYFDATKPLTQPTVAGSTPILPAQVAPGAA CQRRILMNTIDDRLIALDADNGQFCPDFGTNGSVNLREGMGAAADPSYVLTSAPTLAGTT VVVGGRVADNVSTDMPGGVVRGYDVITGQQRWAFDPRNPDPNHVLQPGEHYKRSSANSWA PMSWDASMNTLFIPMGSSSVDLWGADRIQGDHKYATSILALDATTGKEKWVYKTVRNDLW DFDVPMQPSLVDFPTKEGNKSAVVVGTKAGQIYVLDRLTGQPLTEVKEVPVKPADIPNEQ YPATQPRSVGMPQIGAETLKESDMWGATPFDQLVCRISFKSMRYDGLYTMPGTDVSLSFP GSLGGMNWGSLSTDPNNHYIFVNDMRLGLWVQLIKQDPQSAVANTGGEAVNAGMGAVPMK GTPYSVNKNRFMSPLGIPCQKPPFGTLSAIDLKTQKIVWQVPVGTVQDTGPFGIKMRAQM PIGMPTLGGTLATQGGLVFIAGTQDYYLRAFDSSTGEEVWKARLPVGSQGGPISYVSPKT GKQYILISAGGARQSPDRGDYVIAYALDK >gi|289777623|gb|GG745508.1| GENE 796 902743 - 903039 284 98 aa, chain - ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 98 33 130 130 172 87.0 2e-43 MLYVIYAEDIADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNEPGAAGFSGST VIAEFESLEAAQSWANDDPYIAAGVYRQVSVKPYKKVF >gi|289777623|gb|GG745508.1| GENE 797 903323 - 903526 102 67 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1997 NR:ns ## KEGG: Kvar_1997 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 67 1 67 67 120 98.0 2e-26 MTLYPCNPLKSQGDAIPLTQNLALNIPVPMLQKLDRVGYELAGRYKLGGLSEQRVRLLAL AHLIERA >gi|289777623|gb|GG745508.1| GENE 798 904026 - 904547 302 173 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2000 NR:ns ## KEGG: Kvar_2000 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 173 1 173 173 309 96.0 3e-83 MNSPTQKRIEIESHFIPKIKAALENIEDAKDIYNADSLNKDTLIAIKTKQLMSQPVEDYG FRIRQVTHPAMVQTIIQSMMNEGYIVYEMGAGFIKFVPLQQSPKHNPLAEIEKACKKAAE KFVDSGITEKANKVNNAIHAHNVLVKQAEEALSGIKPFESYLSVIVADEVGND >gi|289777623|gb|GG745508.1| GENE 799 904730 - 904927 169 65 aa, chain - ## HITS:1 COG:no KEGG:KPK_4418 NR:ns ## KEGG: KPK_4418 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 4 65 2 63 63 91 88.0 1e-17 MKKRKKYFTIVAEKTHQFYMQYKSLSELTGITPPSGYTPPRMMTKTRRYEVIKAICQKLK PLDII >gi|289777623|gb|GG745508.1| GENE 800 905845 - 906162 136 105 aa, chain + ## HITS:1 COG:no KEGG:KPK_4421 NR:ns ## KEGG: KPK_4421 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 105 1 105 105 214 100.0 1e-54 MSVLPFDLPDKAIQPTNQFIFLTGTEDFTTRKTAAAKIARARGQRFFVHMCKRHGASEHY SSCMACVECQKQWYRDNGKHKPDPDIKPFSSAYTIAAVFFKGIRL >gi|289777623|gb|GG745508.1| GENE 801 906209 - 906571 301 120 aa, chain - ## HITS:1 COG:no KEGG:KPK_2127 NR:ns ## KEGG: KPK_2127 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 120 29 148 148 230 100.0 1e-59 MNKVKAVVFGVMMSAAITANAANETTTVTGEVGKDVKLSLESNPTTGYGWMIKDLPDGLI FVSGGYEQSKDCPKGAVGCGGEEVLHFIGEKKGESTLKLIYGQSFNKSSWQEKEVKVVIK >gi|289777623|gb|GG745508.1| GENE 802 906909 - 907157 126 82 aa, chain - ## HITS:1 COG:AGl1981 KEGG:ns NR:ns ## COG: AGl1981 COG1961 # Protein_GI_number: 15891106 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 82 165 246 250 91 58.0 4e-19 MMLDMLAAIARKDYTDRKRRQAQGIVKAKSDGKYKGRPEDTQRNERIAKLLQAGMSYSDV METVACSRATVAKVSKSLKELA >gi|289777623|gb|GG745508.1| GENE 803 907730 - 908158 158 142 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2003 NR:ns ## KEGG: Kvar_2003 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 15 142 1 128 128 226 100.0 3e-58 MAKIKKILISGMGLMVKKITLLGLSALFVSHVAFADNSSNWISVASNDTTEYSAKKGTFK NIKGESSILMMFDNKSDKTIKYYKVSIKNADCDNGFGKLSFFGMDGRLDFQGDYVADGNS VGAGMGDFICAVRVAAANAQKG >gi|289777623|gb|GG745508.1| GENE 804 908441 - 908977 123 178 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2004 NR:ns ## KEGG: Kvar_2004 # Name: not_defined # Def: resolvase # Organism: K.variicola # Pathway: not_defined # 1 178 346 523 523 315 100.0 5e-85 MLDNIVGFLERDDGNNTDKRKAEIEYQISLVTSKLKKATTLLLELDDVTELKEQVKELNI QRSNLQSELDELNQRETLSDKPLHHLSEIDLTTKAGRVEAQLILSKFVQSIELQREMIII TLRNGTVIGKSRDLSPVLSQDLMKQVVSSPSPTDIDMFSVITSDEEFRKSGKQVTKRS >gi|289777623|gb|GG745508.1| GENE 805 910066 - 910839 613 257 aa, chain + ## HITS:1 COG:STM1737 KEGG:ns NR:ns ## COG: STM1737 COG0810 # Protein_GI_number: 16765081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Salmonella typhimurium LT2 # 13 253 1 237 242 205 73.0 8e-53 MAYATSPNSSNTMTLDLPRRFPWPTLLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEIT MVAPADLEPPPAAQPVVEPVVEPDPEPEPEVVPEPPKEAPVVIHKPEPKPKPKPKPKPKP EKKVEQPRRDVKPAAEPRPASPFENNNTTPARTAPSTSTAAAKPTVTAPSGPRAISRVQP TYPARAQALRIEGTVRVKFDVTPDGRIDNLQILSAQPANMFEREVKSAMRRWRYEQARPG TGVTMTIKFRLSGVEIN >gi|289777623|gb|GG745508.1| GENE 806 910881 - 911753 970 290 aa, chain - ## HITS:1 COG:ECs2431 KEGG:ns NR:ns ## COG: ECs2431 COG3001 # Protein_GI_number: 15831685 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Escherichia coli O157:H7 # 1 285 1 284 286 486 82.0 1e-137 MWQAISTLLRDWHSENAEIELKTELPGGEIHSAWHLRFGGKDYFVKCDERELLPIFTAEA DQLELLSRSKTVRVPQVYAVGSDRDYSFVVMEYLPPRPLDAHNAFLLGQQLAHLHQWSDQ PQFGLDFDNDLSTTPQPNAWQRRWSVFFAEQRIGWQLELAAEKGLHFGDIDTLVDVVQQR LANHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPMHPEQPPQIYDGY QSVSPLPAGFLDRQPIYQLYTLLNRAILFGGQHLVTVQQALDDVLTEKTR >gi|289777623|gb|GG745508.1| GENE 807 911859 - 912143 326 94 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2007 NR:ns ## KEGG: Kvar_2007 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 94 1 94 94 165 100.0 6e-40 MSNEITAWVVSVTFHEQALTEINEVSNHFTRAGFVLTLNDEDGNPHELGTNTFGLLSAQD ADEVKALSAGLAESALGRPAEITVSTFAEWLKAQ >gi|289777623|gb|GG745508.1| GENE 808 912236 - 913168 1071 310 aa, chain - ## HITS:1 COG:ECs2429 KEGG:ns NR:ns ## COG: ECs2429 COG1105 # Protein_GI_number: 15831683 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 307 1 307 309 473 79.0 1e-133 MTKIYTLTLAPSLDSATQTPQIYPEGKLRCSAPVFEPGGGGINVARAVTFLGGKATAIFP VGGATGEHLAALLADEQVPVETVETRDWTRQNLHVHVAASGEQYRFVMPGAALTDDEFRR LEEKVLTIEPGSLLVVSGSLPPGISVENLMQLVKNAQQQGLRCIIDSSGDALAAALDVGN IELVKPNQKELSALVQRDLSQPDDVRLAAQSLIQSGKVRRVVVSLGPQGALGVDASGSVQ VVPPPMKSQSTVGAGDSMVGAMTLRLAENAGLEDMVRFGVAAGSAATINQGTRLCSQANT QKIYDYLCGR >gi|289777623|gb|GG745508.1| GENE 809 913523 - 914281 769 252 aa, chain + ## HITS:1 COG:ydiY KEGG:ns NR:ns ## COG: ydiY COG3137 # Protein_GI_number: 16129676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative salt-induced outer membrane protein # Organism: Escherichia coli K12 # 1 252 1 252 252 405 84.0 1e-113 MKLLKTVPAAVMLAGGLFASVGAMADDSVFTVMDDPSAAKKPFEGVVNAGYLAQSGNTKN SSMTADSTLTWYGNTTAWSLWGNASNTSSNDERSSEKYAVGGRSRYNLTDMNYIFGQGSW LTDRYNGYQQRDVLTAGYGRQILNGPVHSLRFEFGPGVRYDEFTDGETDTQPLGYASGTW AWQMTDNAKFTQGVSVFGAEDTTVNSESALNVAINAHFALKVAYNVTWNSAPPSSAPEHT DRRTSLSLGYKM >gi|289777623|gb|GG745508.1| GENE 810 914552 - 914785 262 77 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2010 NR:ns ## KEGG: Kvar_2010 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 77 1 77 77 121 100.0 8e-27 MKNTSFTIAALALCVLSFGASAATPVPPSGNQDHTQVGIAKATDVEAGSNIAPGSRTTGQ SMSDAFNVHTLVAGEWS >gi|289777623|gb|GG745508.1| GENE 811 915278 - 917146 2403 622 aa, chain + ## HITS:1 COG:STM1333 KEGG:ns NR:ns ## COG: STM1333 COG0441 # Protein_GI_number: 16764684 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 622 21 642 642 1266 95.0 0 MDVALDIGPGLAKATIAGRVNGELVDACDPIETDSTLSIITAKDEEGLEIIRHSCAHLLG HAIKQLWPNTKMAIGPVVDNGFYYDVDLDHTLTQEDIDALEKRMHELAEKNYDVIKKKVS WHEARETFVKRGETYKVSILDENIAHDDKPGLYHHEEYIDMCRGPHVPNMRFCHHFKLMK TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA PGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT SSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRGFT QDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKLSTRPEKRIGSDETWDRAEAD LAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPQRLSASYVGE NNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWIAPVQVVVMNITDSQAEYVNELTR KLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVEAGKVAVRTRRGKDLGSMD VSEVIEKLQQEIRSRSLQQLEE >gi|289777623|gb|GG745508.1| GENE 812 917216 - 917692 656 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 157 3 159 159 257 79 1e-66 EVRLTGLEGEALGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSK EQKKKQKVIQVKEIKFRPGTDDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIGM EVLTRVRDDLSELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|289777623|gb|GG745508.1| GENE 813 917774 - 917986 358 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401] # 1 70 1 70 70 142 98 5e-32 MEVIKMPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDL GLVIACLPYA >gi|289777623|gb|GG745508.1| GENE 814 918037 - 918393 578 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 227 100 2e-57 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA >gi|289777623|gb|GG745508.1| GENE 815 918700 - 919683 1447 327 aa, chain + ## HITS:1 COG:ECs2421 KEGG:ns NR:ns ## COG: ECs2421 COG0016 # Protein_GI_number: 15831675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 652 96.0 0 MSHLAELVASAKAAINEASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVI NEAKEQVQQALNARKADLEGAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFF GELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMEN QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKNISFTNLKGTLHDFLNNFFEEDLQ VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME RLTMLRYGVTDLRAFFENDLRFLKQFK >gi|289777623|gb|GG745508.1| GENE 816 919699 - 922086 2980 795 aa, chain + ## HITS:1 COG:ECs2420_2 KEGG:ns NR:ns ## COG: ECs2420_2 COG0072 # Protein_GI_number: 15831674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Escherichia coli O157:H7 # 140 795 1 656 656 1212 92.0 0 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA VLNKAPLNAPEITPVAATIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKLDSD TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY ERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTHEETLPKRATITLRRSKLDRLIGHH IDDAQVTDILQRLGCEVTVGQDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDAPVQ AGLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKIQQLIHAGEEALILPSPISSE MSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTQAPLGIRQDVMLAGAICGNR YEEHWTLAKETVDFYDLKGDLESVLDLTGKLADIEFRGEAIAALHPGQSAAIYLKGERIG FIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQARDISRFPANRRDIAVLVAENVAA ADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAR CVEALKERFQASLRD >gi|289777623|gb|GG745508.1| GENE 817 922091 - 922390 318 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 127 66 2e-27 MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDK >gi|289777623|gb|GG745508.1| GENE 818 922443 - 922811 400 122 aa, chain - ## HITS:1 COG:PA5083 KEGG:ns NR:ns ## COG: PA5083 COG0251 # Protein_GI_number: 15600276 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 16 122 11 116 116 123 62.0 7e-29 METNRMTIIRNNPQPRLSASVAYGNLLFLSGQTPKSSEDDIVLQTREVLEKIDALLAAAG SDKRQILSAQIWLKDIERDFVAFNDVWVQWMPEGQSPARAAVQAEMARPDILVEIMLTAV KA >gi|289777623|gb|GG745508.1| GENE 819 922793 - 924046 1130 417 aa, chain - ## HITS:1 COG:PA5084 KEGG:ns NR:ns ## COG: PA5084 COG0665 # Protein_GI_number: 15600277 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 1 411 1 408 416 344 48.0 2e-94 MNKRIVIIGGGVVGLATAWELIKRGHQVQLLERNAEPGSATSFANGGQLSYRYVAPLADS GVPLQGIKWMGKADSPLNMRLKMSFQQWRWLLQFLRACNSQTNKMNGDHILRLSLLSRQV MQSWLDEDNLADFHWRRSGKLIIHRREYDFNKAAKGIDPQYQQALNADACLQLEPALRHI SPSLQGGIYSPGDETADCHQFCLALLDKLNASNDFSLLTHCEVQQLNKRGGRISALETNR GTITGDDYVVAAGNGSGPLLGHLGVRVPLCALKGYSLTLPYPEKAGIAPDISVTDYGHKI VYARLGQQLRIAAMVDIGYDGDQLRESRIQALKNIVARSFPELEGLDKAEAWTGMRPSTP AGPPMLGRAGYPNLWMNLGQGSLGFTLAAGSAVVLGALIDNQAPTISLEGLTWKQTA >gi|289777623|gb|GG745508.1| GENE 820 924096 - 925010 898 304 aa, chain - ## HITS:1 COG:PA5085 KEGG:ns NR:ns ## COG: PA5085 COG0583 # Protein_GI_number: 15600278 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 17 318 318 137 32.0 2e-32 MKLRHLEIFHAVMTCGSLSRAAEALNISQPAASKALKSAEMKLGFTLFQRVRGKLLPTSE AITLFEKAQSIYQDLDNLRLLADNLARDPRAKITLGCLPSLGLSLVPELVTDFYQQNSNL VMTLTTEHTETLVKKLDLREIDLALTLQPVQQGEILTTLIAEVPLVYIDRHYRQGAVDIS QIDQQRWISPGPHSLSAAIATRRDFSTTRLNVQTYYMATEFVKRGMGCSITDIFSAQHNL APEMIHPITPPIAINLCLLRRADVSLSPMAQKFVDFLCQRLRQQLKEINLRLYPDHKKSI APLG >gi|289777623|gb|GG745508.1| GENE 821 925288 - 926721 1823 477 aa, chain + ## HITS:1 COG:no KEGG:KPK_2148 NR:ns ## KEGG: KPK_2148 # Name: not_defined # Def: citrate transporter family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 477 1 477 477 789 100.0 0 MSDSTLTGNAPVRRNITRKNVITGLLLLLFVLIALWCHGRPGSELGLLGFTPLVALAILS LIGVDIVLAVISSIIIAMIMTSTGLPEMGTMLAKSTGSFIATVGLIIMLGAGVGEVATRT GAAVELVKFVVHRIGLSSQTRVKFGIVVSSILICGSLGTMAGGNAIIVAVIIPVAAAVRL TPPTVAALMMTAGSVGLFTGPFTPSTVTILSLGGLSYPDYLLYVGLPMSAVTLLAGWIMA GRIQKMTEGKLRYDVDLSEKPKDDLSAAQQRRRKLSALAFAATIIVMAVVGVVIKAGFSF AIIVMLLVALMTGLVGGLRPTQILQALYHGCGRLVWMFILYWLYNPILELMDGLHAYQGL LEYTQPLLEGISPAWLCFSIFAFNIIGHVPGAAVAQMTFTHKIFGPMLMAAGVPPQGTTA VLLASSQVDWFGPFPSSDMFGQMGLAQSTHLKYMLYNGWAIVVANIILFALLFQILV >gi|289777623|gb|GG745508.1| GENE 822 926845 - 927831 1189 328 aa, chain + ## HITS:1 COG:STM1340 KEGG:ns NR:ns ## COG: STM1340 COG4139 # Protein_GI_number: 16764691 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 324 1 324 326 429 85.0 1e-120 MLTLAHLQQRRSRRWLFGLTLLLLVTLLISLCAGDQWIPPGEWLSAKGQLFIWQIRLPRT LAVVLVGAALALSGAIMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGKGVLPGWALGLC AILGALLITFILLRFARRHLSTSRLLLAGVALGIICSALMTWAVYFSTSFDLRQLMYWMM GGFGGVDWQQLWLMIALLPVLCWVCLQSQPLNLLALGEVSARQLGLPLWLWRKLLVVATG WLVGVSVALAGAIGFIGLVIPHILRLCGLSDHRVLLPACMLAGASALLGADIIARLALSA AELPIGVVTATLGAPVFIWLLLRSRGRG >gi|289777623|gb|GG745508.1| GENE 823 927868 - 928668 1356 266 aa, chain - ## HITS:1 COG:STM0245 KEGG:ns NR:ns ## COG: STM0245 COG1464 # Protein_GI_number: 16763634 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Salmonella typhimurium LT2 # 17 266 20 271 271 286 55.0 4e-77 MKKLFSLALIATSVALLSACSPDEDNKVKVAINTGPDEAIWKVVEQVAKDKYHLDVEVVS FNDYVLPNEALNNKDVDANAFQTLPYLEAQSKERGYKFAVVGKTFVFPIAAYSHRIKNIS ELPEGATVTISNETTTLGRSLLLLQAQGLLKLKPGVGYLPTTLDIIDNPKQLKIVEVDTP QLTRTLDDPNVSLSIINTNFSAQAGLSAARDGLFMEGPDSPYVNAIVAREDNKDSKKIQE LKAAFQTSEVAEKAKEVYKGDAIKGW >gi|289777623|gb|GG745508.1| GENE 824 928905 - 929456 903 183 aa, chain + ## HITS:1 COG:STM1341 KEGG:ns NR:ns ## COG: STM1341 COG0386 # Protein_GI_number: 16764692 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 299 77.0 1e-81 MQHDILNTEVTTIDGEKTTLASFAGKVLLIVNVASKCGLTPQYEQLEDLQKQFAGEGFSV LGFPCNQFLGQEPGSEEEIKTFCSTTYGVTFPLFSKIDVNGEHRAPLYQKLIAAAPKAVA PEGSGFYERMASKGRAPLYVDDILWNFEKFLVDRQGNVIERFSPDMTPDDPQLVAAIKGA LAK >gi|289777623|gb|GG745508.1| GENE 825 929456 - 930205 711 249 aa, chain + ## HITS:1 COG:ECs2416 KEGG:ns NR:ns ## COG: ECs2416 COG4138 # Protein_GI_number: 15831670 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 248 1 248 249 299 61.0 3e-81 MAFLMQLQDVEAAGRLAPFSAAFRAGEIVHLVGPNGAGKSTLLTRMAGLSEGPGTVHFNG RRLDEWPATELARRRGYLCQHQTPPFAMPVWHYLTLHMQQQGDSARLSDIAARLGLDNKL DRQVNQLSGGEWQRVRLAAVILQIDPLSHPAGQLLLLDEPMNSLDVAQQAALDRLLRELS AAGIAVVMSSHDLNHTLRHAGQSWLLCQGEAIACGETAEVLNEENLTAAYAIPFQRVEVA GHIMLIASQ >gi|289777623|gb|GG745508.1| GENE 826 930287 - 930751 260 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 34 154 59 174 175 104 42 1e-20 MRFWFMLAAALILAGCSSHRAPPPNPRLADSITVVANLNEQLRSWRGAPYRYGGMTPRGV DCSGFVVRTFRDKFALQLPRETREQAEIGTRIDKRDLLPGDLVFFKTGSGESGLHVGIYD TDNQFIHASTSQGVTRSSLDNVYWNKKFWQARRI >gi|289777623|gb|GG745508.1| GENE 827 930865 - 932307 1748 480 aa, chain + ## HITS:1 COG:ECs2413 KEGG:ns NR:ns ## COG: ECs2413 COG0397 # Protein_GI_number: 15831667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 480 1 478 478 767 77.0 0 MTLSFTTHWRDELPDFYTSLSPTPLDNARLIWRNAPLAQQLGVPDALFASENGAGVWGGE ALLPGMSPLAQVYSGHQFGAWAGQLGDGRGILLGEQQLADGRRYDWHLKGAGLTPYSRMG DGRAVLRSTIRESLASEAMHALGIPTTRALAMVTSDTPIYRERVEPGAMLMRVAESHVRF GHFEHFYYRREPQKVQQLADYVIRHHWPQLQDEADKYLLWFRDVVTRTAQTIASWQTVGF AHGVMNTDNMSILGLTIDYGPYGFLDDFQPDFICNHSDYQGRYSFENQPAVGLWNLQRLA QSLSPFISAEALNAALDEYQHALLTAYGQRMRDKLGLFSQQKGDNDLLDGLFALMIREKS DYTRTFRLLSHSEQLSAASPLRDEFIDRAAFDIWFAGYRARLRDEQVDDAQRQQRMQGVN PALVLRNWLAQRAIEQAEAGDMGELERLHAALADPFTDREDDYVRRPPDWGKRLEVSCSS >gi|289777623|gb|GG745508.1| GENE 828 932337 - 932525 254 62 aa, chain - ## HITS:1 COG:STM1346 KEGG:ns NR:ns ## COG: STM1346 COG4256 # Protein_GI_number: 16764697 # Func_class: P Inorganic ion transport and metabolism # Function: Hemin uptake protein # Organism: Salmonella typhimurium LT2 # 1 62 1 63 63 60 52.0 8e-10 MTRMDNTATAEKPKDNAPYPVATDRQISSRVLLGSEGRVVIEHGGQRYLLRQTNAGKLIL TK >gi|289777623|gb|GG745508.1| GENE 829 932672 - 933718 1133 348 aa, chain - ## HITS:1 COG:ECs2411 KEGG:ns NR:ns ## COG: ECs2411 COG0722 # Protein_GI_number: 15831665 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 627 86.0 1e-179 MNKTDELRTARIESLVTPAELAQRHPVTADVAAHVSASRRRIEKILNGEDRRLLVIIGPC SIHDTDAALEYARRLQGMRERYQPQLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH GIELARRLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC PVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKQGQMTIYQTSGNPYGHIIMRGGKQPNY HAEDIAAAGEALREFDLPEQLVVDFSHGNCQKQHRRQLEVCADICQQIRAGSTAIAGIMA ESFLQEGTQKVVPGQPLTWGQSITDPCLSWDDSERLLSELAAATATRL >gi|289777623|gb|GG745508.1| GENE 830 933873 - 934715 1009 280 aa, chain - ## HITS:1 COG:STM1348 KEGG:ns NR:ns ## COG: STM1348 COG1806 # Protein_GI_number: 16764699 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 4 280 1 277 277 516 92.0 1e-146 MVKMESAVDRHVFYISDGTAITAEVLGHAVMSQFPVAISSVTLPFVENISRARAVKEQID AIYQQTGIRPLVFYSIVIPEIRDIILQSEGFCQDIVQALVAPLQQELNLDPTPVAHRTHG LNPGNLIKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQYGIR AANYPFIADDMDNLVLPASLKPLQHKMFGLTINPERLAAIREERRENSRYASLRQCRMEV TEVEALYRKNKIPCLNSTNYSVEEIATKIMDIMGLNRRMY >gi|289777623|gb|GG745508.1| GENE 831 935046 - 937424 3281 792 aa, chain + ## HITS:1 COG:ppsA KEGG:ns NR:ns ## COG: ppsA COG0574 # Protein_GI_number: 16129658 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Escherichia coli K12 # 1 792 1 792 792 1540 95.0 0 MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFDQFL DQSGVNQRIYALLDETDIDDVSALAKAGAQIRQWIIDTPFQSELENAIRDAYDLLSADDA EASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQG YDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDE FYVHKPTLAAGRPAIVRRTMGSKKIRMVYAPTQEHGKQVRIEDVPQAQRDVFSLTNEEVE ELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHAQGQIIA EGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTC HAAIIARELGIPAVVGCGDATDRIQENQNVTVSCAEGDTGYVYAELLDFSVKSSSVGEMP DLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPGLQNE IRELMKGYDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPEE ENPMLGFRGAGRYVSESFRDCFALECEAMKRVRNDMGLTNVEVMVPFVRTVAQAKAVVEE LERQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVS ELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTV VQTWLGLAELKK >gi|289777623|gb|GG745508.1| GENE 832 937806 - 938918 1532 370 aa, chain - ## HITS:1 COG:ECs2395 KEGG:ns NR:ns ## COG: ECs2395 COG0628 # Protein_GI_number: 15831649 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 355 1 355 370 494 80.0 1e-140 MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRLLF GKRMLAVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVG DKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSALLYWR GEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAISGVPY AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLI RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLE ELSELEAGRK >gi|289777623|gb|GG745508.1| GENE 833 939137 - 942193 3860 1018 aa, chain + ## HITS:1 COG:ZydiJ_1 KEGG:ns NR:ns ## COG: ZydiJ_1 COG0277 # Protein_GI_number: 15802099 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 542 1 542 542 1040 90.0 0 MIPQISQAPGVVQLVLNFLQVLEQQGFTGDTATSYADRLTMATDNSVYQLLPDAVLFPRS TADVALLARVAAEPRFTSLVFTPRGGGTGTNGQALNGGIIVDMSRYMNRIIEINPEEGWV RVEAGVIKDQLNQFLKPYGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL RAVLMGGDILDTQAVPVALAETLGNTPSTIGRIYNTVYQRCKTQRELIIDKFPKLNRFLT GYDLRHVFNDEMSEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALR NAPFMVQAKALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDATL IDQQVTTLCQRLDELMAGSEAGVIGWQVCHDLDGVERIYAMRKKAVGLLGNAKGAAKPIP FAEDTCVPPEHLADYIVEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEVLMKQ ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEALYGELRKIKAVFDPDNRLNPGKIC PPEGVDAPMMKVDAVKRGTWDRQIPIAVRSSWRGAMECNGNGLCFNFDVKSPMCPSMKVS NQRIHSPKGRATLVREWLRLLADRGVDPNQLEKALPEQGVSLRSLVARTRNSWHARKGEY DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHSRYLRPVRDHLVASVESYA PLMAQAPKTFNFFINQPWLKKLSEKHIGMVDLPLLSAPSLKQQMAGHRSANMTLEQLETL SDEQKAKMVLVVQDPFTSYYDAQVVADFIRLVEALGYQPVLLPFSPNGKAQHIKGFLTRF ARTAQKTADFLNRVAQLGMPLVGVDPALVLCYRDEYKQTLGDKRGDFQVLLVHEWLPKAL TTAARPEQGGEPWYLFGHCTEVTALPAATKQWAEIFAHFGAKLENVSVGCCGMAGTYGHE VKNHANSLAIYALSWQQAMQRLPRNRCLVTGYSCRSQVKRIEGSGVRHPLQALLEIIG >gi|289777623|gb|GG745508.1| GENE 834 942190 - 942600 469 136 aa, chain + ## HITS:1 COG:ydiI KEGG:ns NR:ns ## COG: ydiI COG2050 # Protein_GI_number: 16129642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 136 1 136 136 238 83.0 3e-63 MIWKRQATLEQLNRLGEGNMVGLLDIRFETFTDDTLEATMPVDSRTQQPFGLLHGGASVV LAETLGSVAGYLCSEGEQKVVGLEVNANHIRSARGGRVRGVCKALHVGTRHQVWQIEIFD EQSRLCCSSRLTTAVI >gi|289777623|gb|GG745508.1| GENE 835 942804 - 943052 412 82 aa, chain + ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 101 86.0 4e-22 MGILSWIIFGLIAGILAKWIMPGKDGGGFIVTVILGIIGAVVGGWISTLFGFGKVDGFNF GSFVVAVIGALVVLFIYRKVRS >gi|289777623|gb|GG745508.1| GENE 836 943150 - 943470 382 106 aa, chain - ## HITS:1 COG:no KEGG:KP1_3255 NR:ns ## KEGG: KP1_3255 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 106 8 113 113 119 83.0 3e-26 MKKAMTALFAIAAVAAASAFAADKTDVPAPAVDNGARPPLEMGRGPLPPFPPQLPPHRPV LFSATVATDTPAETINKLTALIPASPAKHYEVHVEVVPVTGDADGQ >gi|289777623|gb|GG745508.1| GENE 837 944078 - 945058 1009 326 aa, chain + ## HITS:1 COG:no KEGG:KPK_2167 NR:ns ## KEGG: KPK_2167 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 326 1 326 326 639 99.0 0 MTNEFTYTIKRSRFDENYNPAENTRITTNFANLARGENRQENLRNTLIMMNNRFNTLAHW DNPHNDRYAVELDIISVEMNIAQDGASFPVIEILQTHIVDKKSGERHAGIAGNNFSSYVR DYDFSVLLLEHNKNRGSFSVPDNFGELHGNIFKDFVQSSAYKASFSKAPVICLSVSSKDV YRRTGNEHPVLGIEYAQEGVSLTERYFSKMGLQVRYFMPKHSVAPLAFYFTGDLLSDYTS LELIATISTMETFQKIYRPEIYNANSAAGQYYQPNLNHLDHSLTKIVYDREERSLLAIEQ GKFTQQHFINPHKTLLEQWSANFALC >gi|289777623|gb|GG745508.1| GENE 838 945082 - 946113 1236 343 aa, chain + ## HITS:1 COG:AGl2018 KEGG:ns NR:ns ## COG: AGl2018 COG0620 # Protein_GI_number: 15891128 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 341 1 341 342 614 87.0 1e-176 MKTWLPTSTAGSLPKPSWLAQPETLWSPWKLSSEELLAGKRDALRLSLDDQLRAGIDIVS DGEQTRQHFVTTFIEHLSGVDFAKREIVKIRNRYEASVPTVVGAVERQKPVFVEDARYLR QLTSQPIKWALPGPMTMIDTLYDNHYKSREKLAWEFAKILNQEAKELEAAGVDIIQFDEP AFNVFFDEVNDWGIAALERATEGLKCETAVHICYGYGIKANTDWKKTLGSEWRQYEEAFP QLQKSSLDIISLECHNSRVPMDLLELIRGKKVMVGAIDVASHAIETPEEVAETLRKALAF VDADKLYPSTNCGMAPLPRHVATGKLHALSAGAEIVRRELAAK >gi|289777623|gb|GG745508.1| GENE 839 946198 - 947430 1320 410 aa, chain - ## HITS:1 COG:Rv0849 KEGG:ns NR:ns ## COG: Rv0849 COG0477 # Protein_GI_number: 15607989 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis H37Rv # 16 375 16 374 419 145 35.0 1e-34 MPLFSLRPAATLWPPVLLGSQFVFNIGFYAVVPFLALFLRDDMLLSGGLIGLILGLRTFS QQGMFIIGGTLADRYGAKAIILAGCVVRVAGYLLLACATSLWPIILGACLTGVGGALFSP SIEALLARTGTHSQANGKRSRAEWFALFAVCGELGAVIGPVAGGLLSGIGFRHIALAGAG IFLLALLVLFFCLPADGHTTTMRRRVPWWMPLRQPRFVAFILAYSSWLLSYNQLYLALPV EIQRSGGREQDLAPLFMLASLLIITLQLPLARFARRIGAVRILPVGFLLLSASFVSVALF AATPPAEGWLRLVPSACFVTLLTLGQMLLVPSAKDLIPLFAEESTLGAHYGALATAGGCA VLAGNLLLGHLLDQALTPSPQAVYPWLLLALFPLCSAVALRAICRPLAAT >gi|289777623|gb|GG745508.1| GENE 840 947442 - 948206 203 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 225 278 509 563 82 28 5e-14 MMSICAENITWKAGKKVIVNNVSLRVSRGETVGLLGPNGCGKSSLLRVLAGLRRPDAGRV TLDGQDITRMAKKQLARRVAFVEQHGMTEANMRVRDVVRLGRIPHHSPFSNWSAQDDEAI TAALQRVAMLEKSEQGWLSLSGGERQRVHIARALAQSPSEILLDEPTNHLDIHHQMQLMQ LISELPVTSIVAIHDLNHAAMFCDSLIVMQQGQILASGTPEEILSEALLWDVFRVKTKIE ISPYHGKKHIHFIV >gi|289777623|gb|GG745508.1| GENE 841 948203 - 949240 1154 345 aa, chain - ## HITS:1 COG:AGl2856 KEGG:ns NR:ns ## COG: AGl2856 COG0609 # Protein_GI_number: 15891538 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 35 345 31 341 342 278 57.0 8e-75 MSIAVLQTRRSMLLTGWCLLAVIVLALVIAVGVSVGELAIPLQNVFYAISNRTGLTAEPL NRIYESVIWDFRLSRALVAACCGAGLAICGVVLQSLLKNALAEPYVLGVSAGASTGAVSI VVLGLGAGAISLSAGAFAGAFAAFAFVALLTNGARGGNERTILAGVAASQLFNAITAYTI STSASAQQARDVMFWLLGSFSGVRWPEFQLVIVVVLAGLAVCLWYARALDAFTFGDDAAA SLGIAVPQVRLILFTTAALITATIVSMAGSIGFVGLVVPHVMRFFFGPLHRTLLIASALA GAILMVLADIASRLLIAPQSLPVGVVTALVGVPFFAVIIYRSRNK >gi|289777623|gb|GG745508.1| GENE 842 949240 - 950238 1293 332 aa, chain - ## HITS:1 COG:BMEII0535 KEGG:ns NR:ns ## COG: BMEII0535 COG0614 # Protein_GI_number: 17988880 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Brucella melitensis # 12 332 23 343 344 280 45.0 4e-75 MKKVLCALGLMFTAVSSALATTYPLTIENCGYQETFTRPPERVVALGQNTVEILLLLGLQ KQVVASAFWPTSVLPQLAEQNAKIKTLTVEIPSLESVLAQNPDFVPAQLPLLLGPESKVA RREDLATVGVNSYVSPGMCATKKATGDMYGSRQKLWDMTWLYQEISDFSRIFNVEDRGQA LIADFKKREADLRQEFGKSKKDLSFVFWFSSASPSADAYVGGKNSASGFIASVLGGHNAI TSETEWPTVSWESIIAANPDVIVVSSLDRNRWALDKAEEKIKFLKSDPAVSQLEAVKKGH IVVMDGQAMNPTIRTLYGAEQVGEQLRKMGLN >gi|289777623|gb|GG745508.1| GENE 843 950425 - 950643 273 72 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_2336 NR:ns ## KEGG: Rahaq_2336 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 72 1 72 72 115 76.0 4e-25 MLIYNVFGRHIGVKREGARWLVFRVDLTERKFSRLYDIIIPDEMPEEAIPGWLDDLFHEA ATARYPGVQRVE >gi|289777623|gb|GG745508.1| GENE 844 950657 - 951568 919 303 aa, chain - ## HITS:1 COG:RSc3334 KEGG:ns NR:ns ## COG: RSc3334 COG0583 # Protein_GI_number: 17548051 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 299 2 297 298 287 56.0 1e-77 MNTSIPWEWYRTFLAVLQEGSLSGASRTLNITQPTAGRHIAGLEAALGQALFTRSQTGLL ATDAALALRVHAEAMDNTARALERTAANFSRDRTELRGVVRVAASEVVGAEVLPPLVARL RQACPNIVIELMLSNRFQDLLHREADIAVRMVAPQQEQLIARRLGRIELGLHATAAYLTR QGLPATLDDLASHALIGFDSATPLVRRALQAYPRFQREAFAMRTDSDLAQLSLIRAGAGI GICQVPLADGIIPLQRVLASDFSLNLDTWLVMHEDLRHSPACKRVFDFLAQGLQAYIRGP LAS >gi|289777623|gb|GG745508.1| GENE 845 951665 - 952660 881 331 aa, chain + ## HITS:1 COG:AGc3984 KEGG:ns NR:ns ## COG: AGc3984 COG0451 # Protein_GI_number: 15889470 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 319 40 354 373 338 54.0 1e-92 MNSSGKVLILGASGGIGGEAARRLVADNWQVRALKRGAQIRGPADGMQWIAGDALNAGQV AAAAAGCDVIVHAVNPPGYRHWRQQVLPMLHNTLQAAEQQRALVVLPGTVYNYGPDAFPL IAEEAAQQPVTRKGAIRVEMELALEDYVQRGGRALVVRAGDFFGPRAGNNWFSQGLVKPG QLPRVISRPGAIGVGHQWAYLPDVADTIAALLARRHELEPFARFHMQGHWDPDGSEMSQA IQRVVAHYGGRAAVKSFPWWLVKLAAPFNATLREMVEMHYLWRLPVRLRNDKLVDFLGAE PHTPLDSAVLQTLQGLGCLPAGAINHETREA >gi|289777623|gb|GG745508.1| GENE 846 952756 - 953370 660 204 aa, chain + ## HITS:1 COG:XF2085 KEGG:ns NR:ns ## COG: XF2085 COG1309 # Protein_GI_number: 15838676 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 204 1 205 205 246 60.0 3e-65 MTKNTPTPASRGPHDHSVRDQILDAAMAHFSRYGYEKTTVTDLAKAIGFSKAYIYKFFDS KQAIGEAICASRLEKIMVAVSAAIADAPSASEKLRRLFRALTEAGSELFFEDRKLYDIAA VAARDKWPSTEQYAGHLQQLIGQILVEGRQAGEFERKTPLDEATLAVYMVMCPFINPVQL QYNLDTAPTAAVLLASLILRSLSP >gi|289777623|gb|GG745508.1| GENE 847 953445 - 954554 1184 369 aa, chain + ## HITS:1 COG:XF2084 KEGG:ns NR:ns ## COG: XF2084 COG0845 # Protein_GI_number: 15838675 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Xylella fastidiosa 9a5c # 11 369 11 368 368 348 60.0 7e-96 MLRLNAVHLAVCLLPLALAGCGEPADHDDPRTRPPLVRVATVERAEASSRAFTGVVVART QSDLGFRVSGKILARLVETGQSVKRGQLLLRLDPADLTLQAQSQQRAVDAARARAKKATN DLARYRGLVASGAVSAAEFDQVNAAAEAARADLSAAQAQANVAQNATGYAGLLADADGVV VETLAEPGQVVSAGQVVIRLARAGQREARVQLPETLRPAVGSEALATRYGSKSQPVTATL RLLSDAADATTRTFEARYVLNGALANAPLGSTVTLRIGSDQAPGQVLEVPLASLYDPGNG PGVWRIASRPATVSWQPVTVLGLNDETARVTGPLKPGEPIVALGAHLLHQGEAVRLAERR EHNAAGSQP >gi|289777623|gb|GG745508.1| GENE 848 954551 - 957652 3632 1033 aa, chain + ## HITS:1 COG:RSc3205 KEGG:ns NR:ns ## COG: RSc3205 COG0841 # Protein_GI_number: 17547924 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Ralstonia solanacearum # 1 1023 1 1023 1040 1592 79.0 0 MSAGRFNLSALAVRERSVTLFLIILISVAGLVAFFGLGRAEDPPFTVKQMTVITVWPGAT AQEMQDQVAEPLEKRLQELKWYDRTETYTRPGMALITLSLQDQTPPSEVPEQFYQARKKL GDEAKNLPAGVSGPMMNDEFADVTFALFALKARGEPPRQLVRDAEALRQQLLHVPGVKKV NILGEQAERIYLSFSHDRLATLGLSPEAIFAALNSQNVLTAAGAIETRGGQIFIRLDGAF DRLQQIRDTPIIAGGRTLKLADVATVERGYEDPATFLIRNQGEPALLLGVVMREGWNGLA LGKALDAETASINQSLPLGMSLTKVTDQSVNISAAVDEFMIKFFVALLVVMAVCFVSMGW RVGVVVAAAVPLTLAVVFVVMEATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE GYDRLKASAYAWSHTAAPMLAGTLVTAVGFMPNGFAQSTAGEYASNVFWIVGIALIASWI VAVIFTPWLGVHLLPDRKPAAAGHAALYDTPRYQRFRRLLTRVIARKWRVAASVVVLFMV AILGMSAVKKQFFPTSDRPEVLVEVQMPYGSSIIQTSAATAKIEHWLQQQPEAKIVTSYI GQGAPRFYLAMAPELPDPSFAKLVVLTDGQDAREALKRRLREAVANGLAPEARVRVTQLV FGPYSPYPVAWRVMGPDPHTLLDIAERVKSVLQASPLMRTVNSDWGSRVPVMHFSLNQDR LQASGLSSQSVAQQLQFLLSGIPITTVREDIRAVQVIGRAAGDIRLDPAKIADFTLVGSG GQRVPLSQIGDVSIRMEDPLLRRRDRTPTITVRGDVADNLQPPDVSTALMKSLQPIIDSL PPGYRIETAGSIEESGKATRAMVPLFPIMIALTLLIIILQVRSLSAMVMVFLTAPLGLIG VVPTLLLFNQPFGINALVGLIALSGILMRNTLILIGQIHHNEQAGLDPFHAVVEATVQRA RPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTLGGTIMTLIFLPAMYAIWFRIRPQPP ADAVQHPALHPQG >gi|289777623|gb|GG745508.1| GENE 849 957709 - 958893 1234 394 aa, chain - ## HITS:1 COG:YPO1569 KEGG:ns NR:ns ## COG: YPO1569 COG1304 # Protein_GI_number: 16121839 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Yersinia pestis # 1 375 1 375 381 480 64.0 1e-135 MIVSAPSDYREAARRRLPRFLFDYIDGGAVAENTMNANATELASVALRQRVLCGAGEPTL ATTILDASWAMPVALGPVGATGMYARRGEVQAARAASRAGIPYTLSTVSVCSIEEVASQA SGALWSQLYVLKDRGYMRNALERAWAAGMKTLVFTVDMPIPGSRYRDNRSGMSGPHATLR QYLQACTHPRWAMNVGLAGRPLSFGNIEAYTGHKMTMDDYMGFISNNFDPSIAWHDLEWI RDSWQGKLIIKGILDADDARNAVRLGADGIVVSNHGGRQLDGAIPTARALPRVVDAVGDD LTVLADSGVRSGVDVIRLLALGAKGVLLGRAYIYALAAAGEAGVAHLLRLFAEDMKVTMT LTGATSPSAISLDCLDRLEQDQHRTHAVPVSLPA >gi|289777623|gb|GG745508.1| GENE 850 959273 - 959470 261 65 aa, chain + ## HITS:1 COG:no KEGG:KP1_3238 NR:ns ## KEGG: KP1_3238 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 65 75 139 139 118 98.0 7e-26 MKDKDEQTALIGMAIGAAVISLVATQKQINQGSIVDELVRLGRQKGDGVEDEVFVQAARL VRKGT >gi|289777623|gb|GG745508.1| GENE 851 959336 - 959692 93 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRFLFIAQPGEEKVTVSPKGQQGLEGAGPVVRIRKRQSVTLSESNNRRSPGRDPGNENC DETGKWIARQGRGWLGAFSDQAGGLNKNLIFHPVPLLSAQSHQFIHDTPLINLLLCSH >gi|289777623|gb|GG745508.1| GENE 852 959944 - 960321 516 125 aa, chain + ## HITS:1 COG:ECs2391 KEGG:ns NR:ns ## COG: ECs2391 COG0316 # Protein_GI_number: 15831645 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 206 75.0 1e-53 MEVQAGTFNPADFSWQGLTMTPAAAAHIRDLMRKQPDKKGLRLGIKTSGCAGFGYVLEMI AEPAADDLLFEHDGAKLWAPLQAMPFIDGTELDYVREGLNEIFKFHNPKAQHECGCGESF GVQAE >gi|289777623|gb|GG745508.1| GENE 853 960324 - 961811 1908 495 aa, chain + ## HITS:1 COG:ynhE KEGG:ns NR:ns ## COG: ynhE COG0719 # Protein_GI_number: 16129639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 495 14 508 508 996 95.0 0 MSRNTEATDDVKTWTGGPLNYKEGFFTRLQTDELAKGINEEVVRAISARRNEPQWMLEFR LNAFRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDETCASEPGAVQQTGANTFLT SEVEEAFNQLGVPVREGREVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPELV KKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTIL VADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDNNTGGILNF VTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFFSVALTSGHQQADTGTK MIHIGKNTRSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGPDCGAHTFP YVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEDDAISMIVNGFCKDVFSELPLEFAV EAQKLLAISLEHSVG >gi|289777623|gb|GG745508.1| GENE 854 961828 - 962574 1041 248 aa, chain + ## HITS:1 COG:ECs2389 KEGG:ns NR:ns ## COG: ECs2389 COG0396 # Protein_GI_number: 15831643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 464 93.0 1e-131 MLSIQDLHVAVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGRV EFKGKDLLELAPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRNYRGQEPLDRFDF QDLMEEKIRLLQMPADLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDA LKIVSEGVNSLRDGKRAFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQG YGWLTEQQ >gi|289777623|gb|GG745508.1| GENE 855 962549 - 963823 1572 424 aa, chain + ## HITS:1 COG:STM1372 KEGG:ns NR:ns ## COG: STM1372 COG0719 # Protein_GI_number: 16764722 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Salmonella typhimurium LT2 # 1 424 1 423 423 619 75.0 1e-177 MAGLPNSSNVLQQWHHLFEAQGGQRTAEATQHLQQLLRLGLPTRKHEDWKYTPLDALLNG HFVADEGASLSAEQRDALALPLDAWRLVFIDGRYHPELSDDLAASGVEVSVDNQRQHLPD ALHPEVFLHLTESLAQTVTRLRVPRNRRLDKPLLLMHITRGLAGDALNTAHYRHHLALES GAEATVVEHYLSFNEQPHFTGGRLTMTVADNAHLQHIKLAFENALSYHFAHNDLLLGRDA SAFSSSFLLGGQVLRHHTSTRLGGENSNLRLNSLAMPVKNEVCDSRTWLDHQVGYCNSRQ LHKTIVSDKGRAVFNGLINVAPHALKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCS HGATVGRIDEEQLFYLRSRGIEQQAAQQMILYAFAAELTEAIRSDALREQVLARIGQRLP GGTV >gi|289777623|gb|GG745508.1| GENE 856 963820 - 965040 1703 406 aa, chain + ## HITS:1 COG:csdB KEGG:ns NR:ns ## COG: csdB COG0520 # Protein_GI_number: 16129636 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 406 1 406 406 700 84.0 0 MTFSVERVRADFPVLNREVNGQPLAYLDSAASAQKPEAVIGAEAEFYRHGYAAVHRGIHT LSAEATARMEAVRQQAATFLNAGSAEEVVFVRGTTEGINLVANSWGNANVGAGDNIIISE MEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLDVVPGLFDPRTRLLAITEVSNVLGTE NPLAALIALAHQHGAKVLVDGAQAVMHHPVDVQALGCDFYVFSGHKLYGPTGIGVLYGRS ELLQAMAPWEGGGSMIATVSLTEGTTWNRAPWRFEAGTPNTGGIIGLGAALTYVSQLGLT QIAEYEQTLMRYALEALRAVPDLILYGPAQRKGVIAFNLGQHHAYDVGSFLDNYGIAVRT GHHCAMPLMARYQVPAMCRASLAMYNTTEEVDRLVAGLQRIHKLLG >gi|289777623|gb|GG745508.1| GENE 857 965052 - 965468 624 138 aa, chain + ## HITS:1 COG:STM1374 KEGG:ns NR:ns ## COG: STM1374 COG2166 # Protein_GI_number: 16764724 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Salmonella typhimurium LT2 # 1 138 1 138 138 229 80.0 8e-61 MAALPDKDKLLRNFSRCANWEEKYLYIIELGQRLAPLSPEEHSVQNIIQGCQSQVWIVMA QDPSGVITLRGDSDAAIVKGLIAVVFILYDRMTAQDIIEFDVRPWFEKMALTQHLTPSRS QGLEAMIRAIRAKAANIS >gi|289777623|gb|GG745508.1| GENE 858 965569 - 966555 1052 328 aa, chain + ## HITS:1 COG:STM1375 KEGG:ns NR:ns ## COG: STM1375 COG1376 # Protein_GI_number: 16764725 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 318 1 320 333 440 73.0 1e-123 MKRKTMITLALLSALGVSSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDT AAMLILEANDTIAPVQPKPGTQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQV YPLGIGQLGLETPEMTTRIGQKIPNPTWTPTAGIRARSLEKGVTLPAVVPAGPYNPLGRY ALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFNQVKTGTPVRIINQPVKF AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDAQLKKAMSRRAGYP VVVSTGTGSAPATLSAQNTPSDNSLLTQ >gi|289777623|gb|GG745508.1| GENE 859 966618 - 966854 331 78 aa, chain - ## HITS:1 COG:STM1377 KEGG:ns NR:ns ## COG: STM1377 COG4238 # Protein_GI_number: 16764727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Salmonella typhimurium LT2 # 1 78 1 78 78 103 96.0 1e-22 MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAIRSDVQAAKD DAARANQRLDNQAHSYRK >gi|289777623|gb|GG745508.1| GENE 860 967167 - 968579 2105 470 aa, chain - ## HITS:1 COG:STM1378 KEGG:ns NR:ns ## COG: STM1378 COG0469 # Protein_GI_number: 16764728 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Salmonella typhimurium LT2 # 1 470 1 470 470 848 96.0 0 MKKTKIVCTIGPKTESEEMLTKMLEAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKK AAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLTVG NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIF GCEQGVDFVAASFIRKRSDVVEIREHLKAHGGENIQIISKIENQEGLNNFDEILEASDGI MVARGDMGVEIPVEEVIFAQKMIIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVTIMATICERTDRVMTSRLDFNNDNRKLRITEAVCR GAVETAEKLEAPLIVVATQGGKSARAVRKYFPDATILALTTNETTARQLVLSKGVVPQLV EEIASTDDFYHLGKDLALKSGLARKGDVVVMVSGALVPSGTTNTASVHVL >gi|289777623|gb|GG745508.1| GENE 861 969085 - 969297 298 70 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2143 NR:ns ## KEGG: Kvar_2143 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 70 1 70 70 123 100.0 3e-27 MGNKAKDDELYQEMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTSLANAKIQRSALTVEAM EKVIHALSGH >gi|289777623|gb|GG745508.1| GENE 862 969315 - 969953 836 212 aa, chain - ## HITS:1 COG:PA0243 KEGG:ns NR:ns ## COG: PA0243 COG1309 # Protein_GI_number: 15595440 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 7 210 21 220 222 159 42.0 5e-39 MTVVAHDEAQSLKARIFSAAIAVFAEHGLSGARMEQIATEAQTTKRMVVYYFKSKEQLYQ EVLQYVYARIRETEQQLGLENVPPVEALVRLVRWSVRYHATHADYMRVICMENMQRGKWL QTSGELKPLNRTALSILEDILQRGQQQGVFQAGLEARDVHRLISSFSFYQVSNFYTFSSL YLDDPLPAIDDEAMVAHHCDIAVRAVIRFVIS >gi|289777623|gb|GG745508.1| GENE 863 970080 - 971933 2103 617 aa, chain + ## HITS:1 COG:PA0242_2 KEGG:ns NR:ns ## COG: PA0242_2 COG3185 # Protein_GI_number: 15595439 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: 4-hydroxyphenylpyruvate dioxygenase and related hemolysins # Organism: Pseudomonas aeruginosa # 242 614 1 381 393 315 48.0 2e-85 MLRSIATVSISGTLPEKLHAIAAAGYQGVEIFENDLLYYTGTPAEIRQLAADLGLKITLF QPFRDFEGASRAQFAANMARARRKFALMHELGCDTLLLCSNVQPDCSADSELQVADLRAL ATLAEEEGITIGYEALAWGTHVNRWQQAWERVRRVDSPALGLVLDSFHILARGDTLDALP SVPVEKITFVQLADAPYMKMDLLEWSRHFRCFPGQGELPLEPFAEQVTRCGYRGPWSLEI FNDGFRASPNGATAKDGYRSLLWLEEQTRRRLPTCDADLFSPPPLPVYHGLEFIEFAASA AEAQRLGQHLQALGFQHEGSHRSKQVTLWRNGGARIVINHQPHSWADHFYQRHGVSLCAM ALRVDRSAPIVARARALGYATWQGDAGPNETPIPAICAPDGSLIYLIEAGEGIYERDFHL RDGLTVREDYLGIDHLALGMEADSRDNWVMFFRTVFGFTLEHEQTLPDPYGLVRSLAVRS PQGDIRLALNISQSRATQIARSVACYQGAGLQHAAFACRDLPATCDQLADVARHALPIPA NYYDDLLARFGGELDVGQLQRRQLLYDRDPQGGAFLHLYTRPFTAGRFFFELTERQAGYA LYGAANAAVRLAAMQYC >gi|289777623|gb|GG745508.1| GENE 864 972005 - 973327 2080 440 aa, chain + ## HITS:1 COG:STM3827 KEGG:ns NR:ns ## COG: STM3827 COG0477 # Protein_GI_number: 16767112 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 11 436 22 444 445 348 45.0 8e-96 MSSYSPNPTAAAQPAVTVRRSRRRIGILALLAVGTMINYLDRTVLGIAAPKLTGELGIDP AIMGILFSAFAWTYALAQIPGGLFLDRFGNKVTYFLSLTLWSLFTLFHGMAVGLKTLLLC RFGLGISEAPCFPVNSRVVSAWFPQHERAKATAVYTVGEYLGLACFAPLLFWIMDGFGWR VLFVSVGAVGILFALVWWGCYREPHEDPRLSQQEREHIENGGGLSAPTDQQVAFSWPLVR QLLSKRQIIGASIGQFAGNTVLVFFLTWFPTWLATERHMPWLKVGFFSILPFVAAAGGVM FGGWISDKLLKATGSANLGRKLPIVAGLLMASCIITANWLQSDLAVILVMSFAFFGQGMV GLGWTLISDIAPKGLGGLTGGLFNFCANLAGILTPLVIGFIVAGFGNFFYALIYIGGAAL LGVVAYLFILGDVKRIELSQ >gi|289777623|gb|GG745508.1| GENE 865 973343 - 974179 1068 278 aa, chain + ## HITS:1 COG:BMEII0871 KEGG:ns NR:ns ## COG: BMEII0871 COG0169 # Protein_GI_number: 17989216 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Brucella melitensis # 1 253 11 263 283 151 41.0 1e-36 MVISGNTRLIAHLGYPTASFKAPMIYNPWFVDQQVDVKVVPMGVRPEDYAAFIPPLFTMT NIIGALVTMPHKIATCDLVQRLSPTAAIAGACNAIRREADGSLSGDMFDGDGFVLGLRRK GFNPQGTRALVVGSGGVGSAIAASLAAAGVSALTLYDTRPEVAHALAGRLHQHYPQLDIT LMQHDPVGHELVVNATPLGMKASDPLPLDVDRLAPGTWVGEVVMTQEYTPLLRAAQARQC HIQRGTDMLFEMIPAYLRFFDLPVATPEQLRALAEIRY >gi|289777623|gb|GG745508.1| GENE 866 974239 - 974979 613 246 aa, chain + ## HITS:1 COG:STM3141 KEGG:ns NR:ns ## COG: STM3141 COG0725 # Protein_GI_number: 16766441 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 5 239 1 225 236 179 46.0 5e-45 MSTPLTLLAAGSLRSAFLPLVAHFQQHTGLAVDAQFGPAGLLRERIEAGAPCAVFASANA AHPQALLQAGLAQECQGFAGNQLMLTARRSPDNDGLDWLALLSTPRLRLATSTPGCDPSG DYTWQLFARIEAHYPGLGNAIAGRAQPRVGGRDSLSVPPGEIAGAWLIRQNLADLFIGYA HYGPALAACDDLRTLTIPAPWNIRCDYQLARLRAAPAALALYRFILGDVGQRYLRQAGFM PFSDAE >gi|289777623|gb|GG745508.1| GENE 867 974963 - 975712 187 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 247 1 251 305 76 25 4e-12 MNRSLSLEALRYGHRQPLFAPLTLTCRPGEIWAVLGANGRGKSTLLDTLTGVLPPLGGQV QCEGGVALVPQSFRPAFRWRVSDVVLMGRARHVDLFAQPGEEDARRVENALAQLGIAALA GDDFGALSGGQQQLVLIARALVSASQNILLDEPCSALDLGNQQVVLQLIGDLAHRQARTV LFTTHDPNHALQVASHTLLLLPEGQWLAGETADVLSETHLRQAYGLPVRLIHYAASASPL LAPGFTLRR >gi|289777623|gb|GG745508.1| GENE 868 975709 - 976716 1194 335 aa, chain - ## HITS:1 COG:PM1148 KEGG:ns NR:ns ## COG: PM1148 COG0609 # Protein_GI_number: 15603013 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 54 334 60 340 340 290 60.0 2e-78 MRANHHPWRLQGSLALATLAIAVASLCFGQYPLSLRAVGHTLVHLPPGEGVIGQIVWSVR LPRVVMALLAGGALGLCGATLQGVFQNPLVDPHIIGVTAGSAFGGTLAILLGVGGLLMMA STFFFGLIALGLIYALAALQGRDSTLGLILSGIILSGFFAALVSLMQYLADSEETLPNIV FWLLGSFATASWHKVLLMSLPMALAAGVLWKLRWRINLLALEERDARSLGVPVAALRRGV LVCCAVLVAAQVAVSGSIAWMGLVVPHLARLLVGADHRRLLPTAFWLGAALMLVVDDLAR TLTQAEIPIGIITALLGAPLFTFLLVQSRRRSTLQ >gi|289777623|gb|GG745508.1| GENE 869 976706 - 977764 1393 352 aa, chain - ## HITS:1 COG:PM1149 KEGG:ns NR:ns ## COG: PM1149 COG0614 # Protein_GI_number: 15603014 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Pasteurella multocida # 17 347 15 348 350 447 65.0 1e-125 MSKHPLLLGLTLLSASLFTGQAFADRTVTDQLGRQVTLPDHITRVVVLQHQTLNLLVQLH AAEDIVGVLSSWQKQLGPQFARFMPEIGQLATPGDLTQVNIESLLALRPQVVFVANYAPP AMIAQIQQAGIPVVAISLRQDAAGEKNKMNPTMADEEQAYNAGLVEGIRLIGEVVERQPE AEALIHYTFAARKQANAPVADIPQNQRVRVYMANPDLNTYGAGKYTGLMMAHAGALNVAA ASVKGARQVSLEQVLEWNPQVIFVQDRYPQVVKQIENDPQWQVIDAVKHHRVWLMPEYAK AWGYPMPEALALGELWMAKKLYPSRYQSIDVDSKARDYYQRFYRVAWTPDAR >gi|289777623|gb|GG745508.1| GENE 870 977857 - 978669 998 270 aa, chain - ## HITS:1 COG:ECs0401 KEGG:ns NR:ns ## COG: ECs0401 COG1414 # Protein_GI_number: 15829655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 265 39 303 315 386 77.0 1e-107 MRDDGSTEYKTVRGLSRGLLLLKLLNKFDGGATPGLLAEFSGLHRTTVRRLLETLQEEGF VRRSSSDDSFRLTINVRQLSDGFRDEHWISALATPLLGELLREVQWPTDITTLDVDAMVV RETTHRFSRLSFHRAMVGRRLPLLLTASGLTWLAFAPDAERDAIVSMLAARPEAEYQLAR EPERLAAILARTRQNGYGENFRGWQQEEKIASIAVPVSSQQRVIGCLNLVYIASAMTIEQ AAQKHLSALQRVARQIEARMEEEEVWYEMP >gi|289777623|gb|GG745508.1| GENE 871 978847 - 980511 2306 554 aa, chain + ## HITS:1 COG:mhpA KEGG:ns NR:ns ## COG: mhpA COG0654 # Protein_GI_number: 16128332 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 554 1 554 554 942 80.0 0 MTTSTPDIQPAVQHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDTLIDYPRAIGID DESLRAMQAVGLVNDVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWSRRNAFIQPQVD AVMYHGLQRFPQVRCLFSREVEAFSQNGDGVTLNLKGPDGERETVRADWLVACDGGASFI RRTLNIPFEGKTAPNQWIVIDIANDPLATPHVYLCCDPVRPYVSAALPHGVRRFEFMVMP GETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIM PVWQGQGYNSGMRDAFNLAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDLSVTAGNVL APPKRWQGAVRDGLSWLLNYLPPVKRYFLEMRFKPMPQYREGALLTDGAGKTSPVGKMFI QPQVTLESGESVLLDEVIGANFAIIGWGCNPQWGLDAGQIARWRAIGVRFIQVVPAVQIH REQDNAPGTLRVGDTQNRLKSWFAQHNTAIAVVRPDRFVAALAIPQTLGAQLTALAEKMT LATGDTARTEEKVA >gi|289777623|gb|GG745508.1| GENE 872 980513 - 981457 1119 314 aa, chain + ## HITS:1 COG:no KEGG:KPK_2202 NR:ns ## KEGG: KPK_2202 # Name: mhpB # Def: 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.-) # Organism: K.pneumoniae_342 # Pathway: Phenylalanine metabolism [PATH:kpe00360]; Microbial metabolism in diverse environments [PATH:kpe01120] # 1 314 1 314 314 634 99.0 1e-180 MDAYLHCLSHTPLVGFVDPEQAVLDEVNGVIADARRRIAAFDPELVVLFAPDHYNGFFYD VMPPFCLGVGATAIGDFASAAGDLPVPTELAEACAHAVINSGIDLAVSYNMQVDHGFAQQ LEFLLGGLDRVPVLPVFINGVAAPLPGFQRTRLLGEAMGRFLNTLNKRVLILGSGGLSHQ PPVPELAKADAHLRDRLLGSGKQLPPDERERRQQRVINAARRFTEDQRSLHPLNPVWDNR FMSLLEQGRLAELDAIGNDELSAMAGKSTHEIKTWVAAFAALSAFGCWRSEGRYYRPIPE WIAGFGSLSATTEI >gi|289777623|gb|GG745508.1| GENE 873 981475 - 982341 1113 288 aa, chain + ## HITS:1 COG:ECs0404 KEGG:ns NR:ns ## COG: ECs0404 COG0596 # Protein_GI_number: 15829658 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 1 288 22 309 309 549 89.0 1e-156 MSYQPQTEAATSRFLNVNEGGRTLRIHINDCGDGKETVVMLHGSGPGATGWANFSRNIDP LVEAGYRVLLLDCPGWGKSDAIVNSGSRSDLNARILKSVVDQLGIDKVHLLGNSMGGHSA VAFTLSWPERVAKLVLMGGGTGGMSLFTPMPTEGIKLLNALYREPTIENLKKMMSIFVFD TRDLTEALFEARLNNMLSRRDHLDNFVKSLEANPKQFPDFGPRLGEITAPTLIVWGRNDR FVPMDAGLRLLAGIAGSELHIYRDCGHWAQWEHADSFNQLVLNFLARA >gi|289777623|gb|GG745508.1| GENE 874 982352 - 983158 1275 268 aa, chain + ## HITS:1 COG:mhpD KEGG:ns NR:ns ## COG: mhpD COG3971 # Protein_GI_number: 16128335 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Escherichia coli K12 # 4 262 7 265 271 435 82.0 1e-122 MTFSLDALARQLRDAEQTGQAIAPLRDILGVDNADAAYAIQRLNVQHHVAHGRRVVGRKV GLTHPKVQQQLGVNQPDFGTLFADMCYGDNAEVPFSRVLQPKVEAEIALVLKQDLPHADT TFDELYNAIEWVLPALEVVGSRIRDWSIGFVDTVADNASCGLYVIGGPAQRPAGLDLKQC AMHMTRNQELVSSGRGSECLGHPLNAAVWLARKLASLGEPLRAGDIVLTGALGPMVAINE GDSFVAHIEGIGSVAARFVAAGEGHRDA >gi|289777623|gb|GG745508.1| GENE 875 983151 - 984101 1229 316 aa, chain + ## HITS:1 COG:mhpF KEGG:ns NR:ns ## COG: mhpF COG4569 # Protein_GI_number: 16128336 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetaldehyde dehydrogenase (acetylating) # Organism: Escherichia coli K12 # 1 316 1 316 316 498 87.0 1e-141 MRKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVG GLMQMAEFADIDFVFDATSAGAHIKNDAALREAKPGIRVIDLTPAAIGPYCVPVVNLAAN LHQGNVNMVTCGGQATIPMVAAVSRVAKVHYAEIVASIASQSAGPGTRANIDEFTETTSQ AIEKVGGAGKGKAIIVLNPAEPPLMMRDTVYVLSELASQEAIAASIAEMAAAVQAYVPGY RLKQQVQFEVIPEDKPVNLPGIGCFSGLKTAVYLEVEGAAHYLPAYAGNLDIMTSAALAT AEQMAGAMHSAAGATA >gi|289777623|gb|GG745508.1| GENE 876 984098 - 985114 1601 338 aa, chain + ## HITS:1 COG:mhpE KEGG:ns NR:ns ## COG: mhpE COG0119 # Protein_GI_number: 16128337 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli K12 # 1 335 1 335 337 548 88.0 1e-156 MNGKKLYISDVTLRDGMHAIRHQYSLAQVQQIAGALDKAGVDSIEVAHGDGLQGSSFNYG FGAHSDIAWIEAAAEAVSQAKIATLLLPGIGTLHDLKAAYQAGARVVRVATHCSEADVAA QHIAFARELGMDTVGFLMMSHMISPQALAQQALKMESYGATCIYVVDSGGAMNMNDIRDR FRALKAVLKPETATGMHAHHNLSLGVANSIVAVEEGCDRIDASLAGMGAGAGNAPLEVFI AAADKLGWQHGTDLYALMNAADELVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEAAAE RYGLSAVDILVELGKRRMVGGQEDMIVDVALDLLNRNK >gi|289777623|gb|GG745508.1| GENE 877 985250 - 986386 1721 378 aa, chain + ## HITS:1 COG:mhpT KEGG:ns NR:ns ## COG: mhpT COG0477 # Protein_GI_number: 16128338 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 374 37 411 418 446 83.0 1e-125 MVALMEGLDLQAAGIAAVGMAQAFALDKMQMGWIFSAGILGLLPGALVGGMLADRHGRKR ILLGSVLLFGLFSLATAVAWSFPTLLLARLLTGVGLGAALPNLIALTSEAAGSRFRGRAV SLMYCGVPIGAALAAALGFSGLAAAWQTIFWIGGVVPLLLIPLLMRWLPESQAFQRAEAS VPLRTLFAPGHAAATLLLWLGYFFTLLVVYMLINWLPMLLVGQGFRASQAAGVMFSLQIG AACGTLLLGALMDKLTPLRMSLLIYSGILASLLALGSASSLNGMLLAGFVAGLFATGGQS VLYALAPLFYPAAIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASAPGIVL AGVAVFWLMHRQQRAAMV >gi|289777623|gb|GG745508.1| GENE 878 986489 - 987214 794 241 aa, chain + ## HITS:1 COG:PA1469 KEGG:ns NR:ns ## COG: PA1469 COG1496 # Protein_GI_number: 15596666 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 240 1 239 240 143 37.0 2e-34 MAYTSRLLNAIPGIRHAFLDVHETAAFPYAELAPVKLVHGNEVHHYQQPLPTRPHADAVF TAVAGQKVGVVTADCLPMLIASRDGRFVCSVHAGWQGLVSGIVDNSLACFRQQGVALADL VIAVGPHIHPCCYEVSAGFYQQVLDQPGGDRVARHRQRLFHSRSGPVSDPLKAAARGSDN LWFDLRAFAEAIFAEAGVSPASVEWLGSCTYCTPQSLGSYRRRTHFPAPKSFQYSWILRE A >gi|289777623|gb|GG745508.1| GENE 879 987227 - 987724 616 165 aa, chain - ## HITS:1 COG:PA2603 KEGG:ns NR:ns ## COG: PA2603 COG0607 # Protein_GI_number: 15597799 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pseudomonas aeruginosa # 3 165 365 527 527 207 65.0 5e-54 MPAAEVPPGPQAEEISPAQLAQQLDEPGTVVLDFTTSANFVAHHIPGAWWLTRSQLRQAL DVIPPAQRYVVTCGSSLLARYAVPEVAALTGKPVQLLTGGTLAWIAAGLPLAHGDSGLAV ERLDRYRRPYEGTDNSSEAMQAYLEWEYGLVDQLARDGTHGFRVL >gi|289777623|gb|GG745508.1| GENE 880 987988 - 989037 1224 349 aa, chain - ## HITS:1 COG:PA2603 KEGG:ns NR:ns ## COG: PA2603 COG0607 # Protein_GI_number: 15597799 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pseudomonas aeruginosa # 1 347 1 348 527 419 68.0 1e-117 MSTYAYRQAAGIRQALLDRRELALIDVREEADFATAHPLFAVNLPLSKLELEVRRRIPRF TTPLTVYDNGEGLAEIAVERLRAWGYQDVALLAEGLAGWRRSGGELFQDVNSASKAFGEL VESVRHTPSLSAQEVQALIDSRQEVVIVDARRFDEYQTMSIPGSISVPGGELALRVESLT PSPQTPVIVNCAGRTRSIIGTQSLINAGVPNPVHALRNGTIGWTLAGQTLAHQQQRQYDP SARASGARAAEVAHLAERAGVAVIDEATLQRWLQQNDRTTFLFDVRSPEEYAAGHYPGSL SAPGGQLVQETDHFASVRGARIVLLDDDGIRAAITGSWLAQMGWETARS >gi|289777623|gb|GG745508.1| GENE 881 989043 - 989645 781 200 aa, chain - ## HITS:1 COG:PA2602 KEGG:ns NR:ns ## COG: PA2602 COG5553 # Protein_GI_number: 15597798 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme of the double-stranded beta helix superfamily # Organism: Pseudomonas aeruginosa # 5 198 6 199 201 233 60.0 2e-61 MTAPRLEKLRHFIHEVDRLHREHHQTAPLLDAVAQRLAALVRYDDWLPEEYTLPHPHHYQ QYLLHADSGERFSIVSFVWGPGQATPIHDHRVWGAIGMLRGAEENQRYQLDADGIPRALG AATLLEAGQVEKVSADDGDIHRVSNALADRVSISIHIYGGNIGAVKRAVYTPEGQQKPFI SGYSNRHLPNIWDLSREHQG >gi|289777623|gb|GG745508.1| GENE 882 989728 - 990645 1026 305 aa, chain + ## HITS:1 COG:PA2601 KEGG:ns NR:ns ## COG: PA2601 COG0583 # Protein_GI_number: 15597797 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 9 301 1 293 298 259 48.0 5e-69 MQISHKDPMRIDDIDALLATVQFSSLNQAAEYLGITQSAITRRLQRLEQELNVTLLERQT RPLTLTAAGHRVYEQCLSIKRETKKLYSLLDPQGEPRGALRLGVPQSLSEIALPAALSAL SQQFPGLSPQITCGWSGQLQRRLENGELDGMLAMGPAQQSFAEGYSGRLLCPLEVVPIVG RRLNLRASSLRECAEQGWILNPDGCGLRAGLIRELQSQGLRLKLNVESAGAQLQIALVAQ GLGLGLVPRAALANSPWRDEIAVLNLSDFQPAVSLWLIHAQYLANLQPPLTFFASKVVQQ LTVSD >gi|289777623|gb|GG745508.1| GENE 883 990790 - 991875 1447 361 aa, chain + ## HITS:1 COG:PA2598 KEGG:ns NR:ns ## COG: PA2598 COG2141 # Protein_GI_number: 15597794 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 354 1 353 360 464 68.0 1e-130 MSIQFLGMIGHRLSSETIAPVGPIFDRDYIVRFAQTHEAAGFDRLLVGHWSDQPDGFLVT ALAGLSTQKIHYLLAHRPGFVSPTLAARKFATLEHLLGGRLAVHIISGGNDAEQRRDGDY LDHDQRYARTDAFLDTVRQVWTSEQPVDIHNDFYQAEQAWSAIRPLQKPHLPIYFGGSSE AAIAVAGKHADVFALWGESLAQTGETIQRVRAEAAKHQRDIGFSVSFRPIIADSEAEAWE KAEHILHVATEQAAQRGGGFKAKPDSIGAQRLRATAAQGRVVDKRLWTGIAQLVGGGHNS TALVGTPEQVADALLDYYDLGVRNFLIRGFDPLNDAADYGRALLPIAREKAARRAVAERA S >gi|289777623|gb|GG745508.1| GENE 884 991872 - 993023 1106 383 aa, chain + ## HITS:1 COG:PA2597 KEGG:ns NR:ns ## COG: PA2597 COG1960 # Protein_GI_number: 15597793 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 12 375 14 377 383 363 57.0 1e-100 MIHPERDDWARQLTALRQQMAEQAASLDASGEFPRRNIDHLRAGGWLSLAVPSSCGGAGA TLAQLQQVIAAIAWGEPATALIVCMQYLHHLRLAENDAWHAPLRQQVFHDAVEHGGLINS LRVEPELGSPARGGLPDTVATRRAEGWDISGHKIYTTGIEGLRWLAVWARSDDNPPLVGT WLVAGDSPGISVVKSWDHAGMRATGSHEVIFNHVRVAAEHAVDVWPADAPPAAQAEPFRL FANRQTALLAAIYDSIAHAAHDWLVRWLAGRVPAGLGHPLSRLPRVQEKVGQIAGLLLVN RSLLEQAAALRFSAIEANLAKVTITDNAIQAVNIALELTGNHGLSRQNPLERHYRNVLCG RVHTPQSDSAWLAAGNFVFQSQG >gi|289777623|gb|GG745508.1| GENE 885 993029 - 993991 1423 320 aa, chain + ## HITS:1 COG:PA2595 KEGG:ns NR:ns ## COG: PA2595 COG0715 # Protein_GI_number: 15597791 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 20 316 16 312 318 347 68.0 2e-95 MRLSFSGRVAAALMLLALGGYATAQERITLRIADQKGGMRSQLEAANALQNLPYDIKWAE FPAAAPLAEALNAGAVDAGIIGDAPLLFALANGAPVKAIAVDKSNPAGTAVLVSPGSTLK SGADLKGKRIATGKGSIGHFVALKALEQAGISPKEVQWVFLGPVDAKVALLNGSVDAWAT WEPYTTQMVKTNEGQILVSGKGLLPGNTFLAATDSALNDPQKRAALQDYLQRLAGAERWA YANLDSYGKTLGEIIRFPAEIARAQFANRQSQWQPLAEETVTQQQATADFYLANGLIRTR LDVKPTFDPSFSVPAAEVTP >gi|289777623|gb|GG745508.1| GENE 886 993988 - 995025 1409 345 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2167 NR:ns ## KEGG: Kvar_2167 # Name: not_defined # Def: ABC transporter periplasmic substrate-binding protein # Organism: K.variicola # Pathway: ABC transporters [PATH:kva02010] # 1 345 1 345 345 679 99.0 0 MTRNTFSRRRFLQLSGGLALAGVSLPLWAHDMANMASGDAHPALRLPEPYKIKLAINKSA VCLAPVAVAEQQKIFSKYNLDVEFVNFGNSTDVLLEAIATGKADAGVGMALRWLKALEQG FDVKLTAGTHGGCLNLLTAKDSPFGGLESLKGQTIGVTDMAGPDKNFFAILLKRHGIDPI SDVQWKVYPADLLSVALDKREIAAISGSEPFSYRLLETGKYQLIASNMTGDYANLSCCVL GVSGSLARDHKPAAAALTQAILEAHSYAAAHPESVVQSFLAHALNTSEAEVSGILHGQGH GHHAVGEAFVKELTQYAVDLQRVQVIKPGTDPHQFAESIYANVFA >gi|289777623|gb|GG745508.1| GENE 887 995006 - 996001 1468 331 aa, chain + ## HITS:1 COG:BS_ssuC KEGG:ns NR:ns ## COG: BS_ssuC COG0600 # Protein_GI_number: 16077950 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Bacillus subtilis # 154 325 100 271 276 94 31.0 3e-19 MPTYSPEQALARPTGRAPLWGEGLLAAALWLLGGLFTLAWPDAGRRWPFSEGWALAQFTL GGGLLLLALSYRYWRARGARVRHAGKWLALLPVLFAVWEGLTAKSAVLPVPFFAPPQALI EVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLSIGWSQRIGYWVHPVLRLLGPVP STALLPLCLFIFPSSFGASVFLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFL ILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVGVKSGIGFYLQWAQGWAAYPNMYAAL LVMALLCSGLISGLFMLRDRLLSWQRGGMQW >gi|289777623|gb|GG745508.1| GENE 888 995995 - 996783 196 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 35 219 20 214 223 80 29 3e-13 MVTATPDSPAIARGAAVSISHLHHAFTLGKQTVPVLENISLQLRPGESVALLGPSGCGKS TLLRLLAGLEAPQSGQMQIDGAAPGAPGPERILVFQDPTLYPWLTVRQNVLLGPQAQGKK GLEAKADALIDRIGLQAFSEAWPRQLSGGMAQRAALARALLNEPRLLLLDEPLGKLDSLT RISMQRELIALWQQQGYTSLLVTHDIEEALLLCERVLVMSPRPGRIIAEFALPLDFPRHR DNPQLLQHRQDLLRILGQEEDW >gi|289777623|gb|GG745508.1| GENE 889 996893 - 999016 1064 707 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor [Haemophilus influenzae 3655] # 7 707 9 737 737 414 36 1e-114 MQGRALFSLLFLASPGLMAADNSAAKSNNDAEETITVVADGAQQSATSGYQPLSSATATL TSMPLLDIPQVVNTVSDRVLEDQHATSLDEALYNVANVVQTNTLGGTQDAFTRRGFGANR DGSIMTNGLRTVLPRSFNAATERVEVLKGPASTLYGILDPGGLINVITKRPERQFSGSVS ATSTSFGGGTGSFDVTGPIEGTNLAYRLIGEYQNEDYWRNFGKNKSSFIAPSLTWFGERA TVTASYSHRDYSAPFDRGTIFDLNTGHAVNVDRKTRFDEAFNITDGYSDLAQLNAEYRLN DAWTARFDYSYSQDNYNDNQARVMAYDSATGNLTRRVDGTHGSTQKMHSTRADLQGNVVV GGFYNELLTGVAYENYDLLRTDMLRCKNVKGFNIYHPVYGTLDTCNTVSASDSDQRIQQE SYAAYVQDALYLTDNWIAVAGVRYQYYTQYAGKGRPFNVNTDSRDEKWTPKAGLVYKVTP NVSLFANVAQSFMPQSSIASYIGELPPEESTSYEVGAKFDLLNGITANIALFDIHKRNVL YTESIGDETVAKTAGKVRSQGVEVDLAGSITDNLSVIASYGYTDAKVLEDPDYAGKPLPN VPKHSGSLFLTYDIHNVYNSNTLTVGGGGHAVSKRSGTNGADYYLQGYAVADVFAAYKMK LQYPVTLQVNVKNLFDKTYYTSSIGTNNLGNQIGDPREVQFTVKMDF >gi|289777623|gb|GG745508.1| GENE 890 999438 - 1000292 226 284 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 23 246 2 226 245 91 29 1e-16 MAWNAAAQERVMPQRVKPAEQGIVLDALSAGYGQTLIVDDINLTIPTGKMTVLAGANGSG KSTLLSTIARMLKPLGGCVRLDGQAIHQMPTKAVSRQLGILPQSPLTPEGLTVFELVSRG RYPWQGLMRQWSEADELAVEEALRLTGTAEFAHLPVDSLSGGQRQRCWIAMALAQQTATI LLDEPTTWLDLRYQVDILELLQTLTREHGRTVVTVLHDLNFAVNYADLLVFLKQGRIAGT ISDNDVCSPELIKRVFDVDVQMSINPQTGKPFFMPFRARQAVDA >gi|289777623|gb|GG745508.1| GENE 891 1000289 - 1000588 454 99 aa, chain + ## HITS:1 COG:ECs3915 KEGG:ns NR:ns ## COG: ECs3915 COG0609 # Protein_GI_number: 15833169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 14 99 3 88 327 89 63.0 1e-18 MSAAVLYAARRHARPRLALLLLTLLLIAASLVHLGLGARWIAPQTVLQALLEYNPRNFDQ RIIVDLRLVRLAAALLTGAALGVAGLLLQTVIRNPLGEP >gi|289777623|gb|GG745508.1| GENE 892 1001063 - 1001656 786 197 aa, chain + ## HITS:1 COG:ECs3915 KEGG:ns NR:ns ## COG: ECs3915 COG0609 # Protein_GI_number: 15833169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 4 197 134 327 327 194 68.0 8e-50 MALASAGRGGATPLRITLCGVALSAFASAVTAAILILDEQTLLAMRTWLAGDLAGLNWST LQTALVPALIGLGVALLIAPRLNVLALGDKVALGLGVNLVQTRLLGLLAIALLCGAAVAV AGPIGFVGLVVPHVVRRLVTEDIRLALPLAAPVGALVLVLADIAARTLVAPQELATGAMT ALVGAPLFIFIAARFFK >gi|289777623|gb|GG745508.1| GENE 893 1001653 - 1002705 1358 350 aa, chain + ## HITS:1 COG:ECs3914 KEGG:ns NR:ns ## COG: ECs3914 COG0609 # Protein_GI_number: 15833168 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 5 350 4 349 349 350 58.0 2e-96 MTRAVHRAGFRPLVIASRQLLLRPAALNIAAIMMLMLLALGLYSLSRGSFPLPASTLARA LLAPQDMGEQPRFILFDIRLPRILMALLCGAMLGLAGAAMQSITRNGLADPGLIGVKEGA SIVVLALVLFFPAVGLVWRPLAGMVGGVAVALLVLTLARDCSRPRFILIGIGVSWTLAAA VGIFMTTADVRDVQTAMIWLAGSLQAATWPLLAVAFCWALPGAIILFCTARAADVALLGD RTAIGLGVRLQQLTMLRFFAPVLLTSASVSCVGSLGFVGLMAPHMARFVLRGGQVSLLCG SALIGALLVLVTDTLGRLAFAPLQIPAGIVIALVGCPFFVVLLWRRRDAL >gi|289777623|gb|GG745508.1| GENE 894 1002719 - 1003672 1168 317 aa, chain + ## HITS:1 COG:ECs3913 KEGG:ns NR:ns ## COG: ECs3913 COG0614 # Protein_GI_number: 15833167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 18 317 17 315 315 463 76.0 1e-130 MRWFVSLLLLLTGAVSAAAPQTQTFTDDLGRTVTVPLHPQRIVSMHDLDITIPLIELGVP PIASHGRTRPDGSHYLRASAQLTGVDFDNSDIRFIGTADIDLEAVAAAKPDLIITEPSRH VSVEQLEKIAPTVSIDHLQGSAPEIYRKLAQLTGTQPRLAILERRYQEQIKQLKAMVNPP QYSVSVIQANNGKVTVHHSYHALGRVLRDAGFRFPPLIERIPDGQRIDVSAEQLPELDAD FVFATWRSDTGGKPQDELQAMEGVMPGWCDFLRACRTGHYILLPREEVISNSYAALSLMV AQVQSHIAGRPIPAEAK >gi|289777623|gb|GG745508.1| GENE 895 1003669 - 1004571 1185 300 aa, chain + ## HITS:1 COG:ECs3912 KEGG:ns NR:ns ## COG: ECs3912 COG1737 # Protein_GI_number: 15833166 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 5 299 2 295 295 390 68.0 1e-108 MKSAVKKEKGKVDLFGERYRARAHQLSPRLRAVVSYINDNREVVLEHTAMEIATATQTSD ATVVRAIQALGFAGLRELKQTMERWFGTSVTSAEKMRSTVTALSSDVNSSIDFVLEGHQR VCEVLSRADNRAAVAQAVALLSDARQVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTG FSLAEQLIGLQRGDVLIMMGQKSPHREGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVV IDVPRGGDSSRMPLHGTVLVCLEMIVLSVASTTPQKTVKSLKRINDLHRAIGKSGGKRGS >gi|289777623|gb|GG745508.1| GENE 896 1004697 - 1005431 1106 244 aa, chain + ## HITS:1 COG:NMB1612 KEGG:ns NR:ns ## COG: NMB1612 COG0834 # Protein_GI_number: 15677462 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis MC58 # 13 234 37 259 268 177 41.0 1e-44 MAALTAAGQAAAETYTVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAKAEGFDVKLVNTP WEGIFATLNTGDRDIIISGITITDKRKQMVDFSAPYFPAEQSIVVAQDSQVDSLAALKNE KVGVVNSSTGDIVVSEVLGKNSTAIKRFDNTPLMLQELFEDGVSAAVGDVGVVKYYIKQH PEKQFKLVPDAKFERQYFGIAVAKGNSELLGKINAGLQKIVADGTYAKIYKTWFDDNVPT LPAQ >gi|289777623|gb|GG745508.1| GENE 897 1005495 - 1006259 1106 254 aa, chain + ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 4 248 3 243 248 186 45.0 5e-47 MTGFRWEIIEEYGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRY LVQFPVRFYVSAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYG AFLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRIL PPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQL VNRLEKRFGKSDSH >gi|289777623|gb|GG745508.1| GENE 898 1006237 - 1006968 584 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 242 1 242 245 229 46 3e-58 MAKVIHINNLHKRFGDSHVLRGISCDIKPQEVVCIIGPSGSGKSTFLRCMNALETVSEGE VVVNGFAAHDRTTDLNKMRESVGMVFQRFNLFPHMTVLENLIMAPMNLRNMPRQQAVDLA DALLAKVGLSDKRDAWPSSLSGGQQQRVAIARALAMKPSIMLFDEPTSALDPELVGDVLE VMKNLASEGMTMVIVTHEMGFAREVADRVIFIDQGVIQEEGKPGQIFSTPSNPRTAAFLS KVL >gi|289777623|gb|GG745508.1| GENE 899 1007034 - 1007426 156 130 aa, chain - ## HITS:1 COG:RSp1315 KEGG:ns NR:ns ## COG: RSp1315 COG0251 # Protein_GI_number: 17549534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Ralstonia solanacearum # 14 125 29 140 145 90 34.0 7e-19 MKKSIVPEEFQHYFNDWHFSPIIESDGTVYLSGVTAARKDKPISQHPEEQFHDAFYKLGV YLEAAGLTYENILEMTTFHIDLKKHIDLFSKVKDRYIKAPYPAWTAIGVSEFIPENALVE MRIVAKLEVV >gi|289777623|gb|GG745508.1| GENE 900 1007547 - 1009028 658 493 aa, chain - ## HITS:1 COG:PA1262 KEGG:ns NR:ns ## COG: PA1262 COG0477 # Protein_GI_number: 15596459 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 4 435 2 433 480 194 37.0 5e-49 MSTPTIMQAEPRRWAMFVILLVGAFLPPLDFFIVNVALPAIQGELGASSSAEQLVISSYA AVYAVTLVTGGRLGDIYGRGKMFFLGLVGFAAASLLCGLAWSPWVLITGRVLQGATAAIM APQALASVQAIFPEAEKPLALSIYGAVFGLASVIGQVLGGILISVNLFHLGWRAIFLVNL PVALLVILCGLPLVKETRAQSAQKLDPVGMLLATVMLSTLIVPLIEGREAGWPWWTWLSF LAFPLLVSLLWRYERRLSQHGGSPLLDPTVLRAPGLSQGLAIVLLFYSIGAFFLLFSVYL QDALHLNALNAGLIFLPFGVGFLIGPLLTPFLRRFAGNYLSAIGMGCETSGLAGLAGLIA NTMTGTPPPMLPLALLLFVTGLGQGLAMPTLVRMVTGRVAPEFSGMIAGVTSSTLQISTA LSVAIIGGIFYSMLENGRSGANITHAFIVALLTMAVCLATGAGLSIRLIRRSTGLFSTAA RLPGSKSNRHVAD >gi|289777623|gb|GG745508.1| GENE 901 1009090 - 1009836 234 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 4 245 1 238 242 94 28 1e-17 MNKLKDKVAIVTGGSSGIGAGIARQLAADGARVIVNYASNRSSADKVVADIEAAGGRAVA VAADVTNPSEVEALVNSAIGNFGRLDIVVNNAGIYQFARIEDSTEVLYRRQFDINVLGPL LLVGAATPHLGKGSSIINISSFVTRVAIPESAIYSGTKGAIDAITSVLSRELGPRGIRVN AVNPGLIETEGSHISGAMNSDFQIWNEKQTPLGRIGQVQDVAPIVSFLASDDAGWVTGEV ILASGGMR >gi|289777623|gb|GG745508.1| GENE 902 1009965 - 1010834 521 289 aa, chain + ## HITS:1 COG:CC2352 KEGG:ns NR:ns ## COG: CC2352 COG0583 # Protein_GI_number: 16126591 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Caulobacter vibrioides # 2 275 9 287 302 124 32.0 3e-28 MEWGDVRVFLAVMRKGSFGEAARSLGVSHPTVGRRIKALEAEAQQALFRRTKEGLVLTDA GDRVLKLAEAVENSALAMERRLAGNHERLEGILRISCAEWFANYVLAPVLSELTRRHPAI VPEIIASYRLLNLSRRDADIAFRIVPFTEPDIVQRRLMTIPYALYGTPDMAGIAQHDPAA VGLILMNTAQSHFSDVAWLLDRFPQSRRVFTSTSRAVQAQMCQRGMGIAVLPRPLGDAIT GLQPISMPEPPPSKNIWVGYHSDLRHMDRLRVMLDIADVLLADPGTAAT >gi|289777623|gb|GG745508.1| GENE 903 1010837 - 1011376 273 179 aa, chain - ## HITS:1 COG:PA0918 KEGG:ns NR:ns ## COG: PA0918 COG3038 # Protein_GI_number: 15596115 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Pseudomonas aeruginosa # 37 178 42 182 182 85 42.0 4e-17 MKQVAYFHPALRVLHWLMAAAILSMLFIGVAMVSTVSSLHSLLVSIHKPLGVMILLLVIV RLWVRFTTPTPSLPATIPAWQRGIAHLSHWVLYLMMLAQPLIGWAMLSAAGYPVTLGYGI VLPPILGVNNDWYAELRPLHTWVALALFATVMLHLAAALLHAFVLRDGVFNSMTGIRKP >gi|289777623|gb|GG745508.1| GENE 904 1011373 - 1012428 342 351 aa, chain - ## HITS:1 COG:HP0485 KEGG:ns NR:ns ## COG: HP0485 COG0753 # Protein_GI_number: 15645112 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Helicobacter pylori 26695 # 25 339 6 313 314 111 25.0 2e-24 MNIKVQVNKQTVVRLALVGIIPLFLILLFLWAGGWLTPERLTSDKLVTVLQQSGGVHQGY RRNHAKGMCVLGSFISNGNASTLSRALLFSKGETAVTGRLAIAGGNPAAPDYTVPVRSMA LSFTQANGEQWRTGMNAMPFFPVSSVESFYELQTATLPDAKTGKPNPEKVNAFVMSHPEI KPFFAWAKQYIPSSSWASDRFNSLNAFRLIDQAGNEHLVRWSMVPHTRFIPISDIDKQNK DFLQQDLQQRLEQGTLEWDLVFTLAQADDKGNDSTKAWPADRKTINAGTLVLNKAIPQQQ GPCNDINYDPLILPDGIAASDDPILNARSSAYAKSYNLRTHEQAQQAGEHL >gi|289777623|gb|GG745508.1| GENE 905 1012476 - 1013048 16 190 aa, chain - ## HITS:1 COG:no KEGG:KPK_2234 NR:ns ## KEGG: KPK_2234 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 190 1 190 190 349 99.0 3e-95 MTDSIHQGNQQNWLRQYYFSRTIFSILWAVSTFIAARHSYFWASFLLILYPAWDAIANYI DAIRNGGFGRNRMQTVNIIVSAVTTLAVILAINSSINDVIRIFGCWAILSGLLQLGAAVQ RWKNYRAQWSMILSGAQSTLAGAFFLFQSRTIEPPSVDNIVGYAAFGAFYFCISTVSLTV RQKREAQQPG >gi|289777623|gb|GG745508.1| GENE 906 1013248 - 1013832 270 194 aa, chain - ## HITS:1 COG:AGc478 KEGG:ns NR:ns ## COG: AGc478 COG1309 # Protein_GI_number: 15887628 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 190 7 190 192 186 47.0 2e-47 MIERSPKAREIMAYTRQLLTVGGYKSFSYADLAERVGIRKASIHHHFPSKEDLVHAVVQE YRAEARAGMEAMDQQIHDPLIKVKGYADFWSACIKDGTSSFCICVMLAVELPTLPADIAA EVTGHFSDLSDWLASLLRAGETQGVFKLNETAEVEASALMAGIHGAMLAARAFNNPLVFD QIAWPLINKIIKVA >gi|289777623|gb|GG745508.1| GENE 907 1013975 - 1014367 367 130 aa, chain - ## HITS:1 COG:SMc00812 KEGG:ns NR:ns ## COG: SMc00812 COG0346 # Protein_GI_number: 15964510 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Sinorhizobium meliloti # 1 124 1 122 127 95 49.0 3e-20 MFSYIMLGTNDLPRAIKFYDPLMALLGHVKAGRNEQGASWGTFNGNHTCGLCVGTPFDQQ PAGVGNGTMVALNARSIAHIAELHALALQLGGRDEGAPGHRPQYGDGFHSAYVRDPDGNK LAFVYYASAV >gi|289777623|gb|GG745508.1| GENE 908 1014453 - 1015652 1699 399 aa, chain - ## HITS:1 COG:PA5311 KEGG:ns NR:ns ## COG: PA5311 COG0477 # Protein_GI_number: 15600504 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 8 347 2 342 387 141 33.0 3e-33 MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMI SSFLSPALCRRVEMGVLLSGSLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGE SWITGGAAGSQRATLTGIYASAFTGCQLAGPLLISVGPAWQASALMAIVAVTAVCLLMLR HLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGMAVL LVTLVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLL GAAAGALYTLSLVRAGKTFNGQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIV TLVASGVLFLLIQCLCKNEKTLLASEQEEEMDEATESAR >gi|289777623|gb|GG745508.1| GENE 909 1015949 - 1017106 1600 385 aa, chain + ## HITS:1 COG:AGc4953 KEGG:ns NR:ns ## COG: AGc4953 COG1473 # Protein_GI_number: 15889982 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 384 15 392 393 339 47.0 4e-93 MAVSPSLIAEAVGWRREFHAAPELGYQEQETSRRVAELLASFGLQVHRGLAGTGVVATLE NGPGPVIGLRADMDALPITELGSVSYRSRRPGVMHACGHDGHTAMLLAAAAHLAQTRQFS GTVHFVFQPAEENLGGARKMVEEGLFERFPMDAIYALHNWPGIPLGEVALSDGAMMASLD AFEITLRGKSCHAAMPESGADPIVAAAQLIMALQTIPSRRLSPQDSAVVSITQINGGEAI NVLPDTVVLRGTFRCLSNRVRARVRELIESYVATQPQVSDVQGEISWFPGYPVTKNHALQ AQQVREVAVATLGAEAVRWNQAPSMASEDFACMLEACPGAYFWIGTDGETPSKPLHNASY DFNDALISPGVAMWVALVEKQLPAA >gi|289777623|gb|GG745508.1| GENE 910 1017149 - 1019299 2830 716 aa, chain - ## HITS:1 COG:YPO0344 KEGG:ns NR:ns ## COG: YPO0344 COG0243 # Protein_GI_number: 16120679 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Yersinia pestis # 1 716 1 714 715 1045 68.0 0 MKKITSVCPYCGAGCKLKLVVDNNKIIRAEAADGVTNQNQLCLKGYYGWDFLNDTQLLTP RLKQPMIRYQKGGAFTPVSWQEAIRYTASKLREIKEKHGPRAIMTTGSSRGTGNETNYVM QKFARAVLNTNNVDCCARVCHGPSVAGLQQALGNGAMSNSISDIENSKCLLVFGYNCADS HPIVARRVIKARENGAKIIVCDPRRIETARIADRHLQLNNGSNMALVNAFGYVLLEEELY NKAYVERYTEGLDAYREAVKDYAPEAVEAIVGVSAQAIREAMRIFAAAPSATIMWGMGVT QFGQAVDVVRGLASLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNLFPGYQEVTDP AVREKFAAAWGVDPALMDDQVGTRITEVPHKALTGEIKAYYIMGEDPLQTEADLGLVRKG IEALDFVVVQDIFMTKTAEIADVLLPATSWGEHGGVFTCADRGFQRFEQAIPPAGNVKRD WEIISLLASEMGYPMHYENNQQIWDEMRELCPLFYGVTWEKMGDMGHVQWPCPTLDHPGT PWLYKDNRFDTPSGKGQLFATAWRAPAERPDDEWPLVLCTVREVGHYSCRSMTGNCAALQ SLADEPGRVQMNPLDAQRLGIADKQLVWISSRRGKVITRADLSDRINPGAVYMTYQWWVG ACNELTQDNLDPISKTPETKYCAVKVEAIADQQWAERYAWTAYSDMKARLKAAADV >gi|289777623|gb|GG745508.1| GENE 911 1019763 - 1020638 1183 291 aa, chain - ## HITS:1 COG:ZybiC KEGG:ns NR:ns ## COG: ZybiC COG2055 # Protein_GI_number: 15800553 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 286 1 286 361 430 73.0 1e-120 MPTGHRFLATDLHQFVVSLFTHLGSTSGEATLVADHLIAANLAGHDSHGVGMIPSYVKSH AGGFLQLNRHATVTKDAGAVVTLDGNAGFGQVVAHEAMQLGIEKAKQHGMAAIALRNAHH VGRIGYWAEQCAAAGLISIHFVSVIGDPMVAPFRGKDSRFGTNPLCVVFPRAGHPPLLLD YATSAIAFGKTRVAWHKGEAVAPGCLIDAAGRPTTDPAVMQTSPLGALLTFAQHKGYALA TLCEVLGGALSGGQTTHQESLQTSVDAIFNCMTTVILRPDAFDAPDSQLAS >gi|289777623|gb|GG745508.1| GENE 912 1020942 - 1022030 1491 362 aa, chain + ## HITS:1 COG:YPO3050 KEGG:ns NR:ns ## COG: YPO3050 COG1840 # Protein_GI_number: 16123227 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Yersinia pestis # 1 362 1 362 362 540 75.0 1e-153 MYKKISGLVVSLTAVFACAAWAEVPAGYPADYQKTVDAAVKEGKVVIYSTTDTKAAGPLI KGFEAQYPGVKVEYNDMNSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAEQYA SPEVKQLPDWAVWQQKAYGTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADKFKGK VTTYDIEKSGLGFMLAVQDSQADANYFTDLANIAKGGLTVQSSTGTMMERVSSGENLIGY NILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYVLSEKGQQI LASQADIPSIRRDIEGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQFIKQWRSAA AK >gi|289777623|gb|GG745508.1| GENE 913 1022105 - 1023874 2668 589 aa, chain + ## HITS:1 COG:YPO3049 KEGG:ns NR:ns ## COG: YPO3049 COG1178 # Protein_GI_number: 16123226 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Yersinia pestis # 1 589 1 589 589 917 88.0 0 MNVLRRKWQGLPRGVVVCITALVIYVPLLFIVVQSFLSAPFFSRSKSWSLEAFAFIFTDP DFYLALRSGFILAFGLVIIAIPLGGILAFLMVRTDLPGRRIIEPLILVPIFVSPMVLGFG YVVAAGPVGFFSQWAQQLIGFVPWNIYSMFSIVVIAGLTHVPHAYLYISSALRSVGSDVE EAARTVGATPLQVMTSVSLPMVRPSILYACVLLFFLGLEVFGLMLVLGDPEGNMVLATYL YKLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRRLMRTANRFVTMKGKASQARALPLGK WRWVAGAVVVAWLTVTIGVPLLGVALRAFISNWGVGVSLWDELSLATFHNIWQQPNLLRA IVNSMAIGIVGGALAVICYLFVGIAMHRKADNVTRFLDYSVLVPRAVPGLLAGLAFLWVF LFVPMWLDQSLKHGWLSALPVADWLREHLIVQLRALRNTIFSVWLAYTVVWMAYGLRLIS STLLQVGPELEEAARSTGASRGQITRHVTVPLSRYGLIGSWLLMFLIFEREYSTGVYLLS PGTETIGSMLVSLWAAGAIDIVAALSFINILLVVIGLGIALRFGVKLHD >gi|289777623|gb|GG745508.1| GENE 914 1023867 - 1024937 1435 356 aa, chain + ## HITS:1 COG:YPO3048 KEGG:ns NR:ns ## COG: YPO3048 COG3842 # Protein_GI_number: 16123225 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Yersinia pestis # 1 355 1 355 356 578 80.0 1e-165 MIELSVENLHLTYGDNPVLKGVSMTLGRGEVVSLLGPSGSGKTTLLRAVAGLEKPTSGRI AIGNRTVYDGTPRSEIPAEERNLGLVFQSYALWPHKTVFDNVAYPLKLRKVAAGEIKERV QRVLDQLGLGHLGNRHPHQLSGGQQQRVAIGRALVYNPPVILLDEPLSNLDAKLREEARV FLRELIIKLGLSALMVTHDQNEAMAISDRILLLNNGVIEQQGTPQEMYGSPATLFAAEFM GSNNRLHGKVTALENGRARVEGASWTLWGRAGEGVSVGQPATAVIRVERLRLDGAAQDNS LQLPLLTSMYLGDRWEYLFRTEGDDFPLRAYGTALRDAEHCHLTLPAEDVWIFPQR >gi|289777623|gb|GG745508.1| GENE 915 1025422 - 1026105 662 227 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2189 NR:ns ## KEGG: Kvar_2189 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 227 1 227 227 449 98.0 1e-125 MKRAELDVVVLGEDLPNEGLVKGTLGTIVMVFNTPTTGYLVEFCDEKGKTIAMPVLFPAQ LKRYFTIGNLKSLMVEGNYPVADPVDPDVMADLMHKVAPAEWEDKKRRVYEDIQRLLISR PDYADMFNIMDGGEYNGMTLYSLVQAENGEPAWSNIFVRNFETRINDIYVDPNLNDKVVI GEEGMSVIVYSFTDDRFEIRDKVSSEYVIESHTHFTGLLSALIEPVS >gi|289777623|gb|GG745508.1| GENE 916 1026166 - 1026537 505 123 aa, chain - ## HITS:1 COG:SMa1358 KEGG:ns NR:ns ## COG: SMa1358 COG0346 # Protein_GI_number: 16263196 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Sinorhizobium meliloti # 1 122 51 172 174 183 74.0 8e-47 MFDHVKFGASDYAASKAFFLQALAPLGVTLVGEGEPTYGAELAGSGDASLCLYQSAEKPA PLHIAFRADSREQVDAFWQAALAAGGKDNGAPGVRPNYHASYYAAFVIAPDGHNIEAVCH LAG >gi|289777623|gb|GG745508.1| GENE 917 1027041 - 1027793 921 250 aa, chain + ## HITS:1 COG:no KEGG:KPK_2249 NR:ns ## KEGG: KPK_2249 # Name: not_defined # Def: gluconate 2-dehydrogenase, subunit 3 (EC:1.1.99.3) # Organism: K.pneumoniae_342 # Pathway: Pentose phosphate pathway [PATH:kpe00030]; Metabolic pathways [PATH:kpe01100]; Microbial metabolism in diverse environments [PATH:kpe01120] # 1 250 2 251 251 457 99.0 1e-127 MSSEKTNNSRRDFLVKSMALIPTVVIGGAGAGAIGVATSATAQAAPASEPASGNTAAASD WKPQFFNDREWAFINAAVARLIPADELGPGAKEAGVPEFIDRQLNTPYATGSIWYMQGPF NPDVPKEMGYQLPLVPKQIYNLGIADAEAWCQDKYHKTFAELSNEQQDEALGLWESGKAE FKQLPASLFFTYLLQNTREGFFSDPIHGGNKGMVGWTLINFPGARADFMDWVERGERYPF PPVSINGERA >gi|289777623|gb|GG745508.1| GENE 918 1027796 - 1029580 2758 594 aa, chain + ## HITS:1 COG:PA2265 KEGG:ns NR:ns ## COG: PA2265 COG2303 # Protein_GI_number: 15597461 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Pseudomonas aeruginosa # 1 594 1 591 591 913 74.0 0 MATVLKKTDVAIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTWPDGAYPQVIDELTYN IRRKLFQDLSKSTVTIRHNTSQQAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRM RSHYEERYGKNFIPQDMIIQDFGVTYDELEPFFDKAEKVFGTSGTAWSIKGKVVGKGRGG NAFAPDRSDDFPLPAQKNTWSAQLFEKAALEVGYHPYNLPSANTSDSYTNPYGAQMGPCN FCGFCSGYACYMYSKASPNVNILPALRQEKRFELRTNANVLKVNLTDDKSRATGVTYVDG QGREMEQPADLVIIGAFQFHNVHLMLLSGIGKPYNPETGEGVVGRNFAYQNMTTIKAIFD KDTYTNPFIGAGGNGVGVDDFNADNFDHGAAGFVGGSPFWVNQAGTKPISGFPVPPGTPA WGSKWKAAVADTYTHHLSMDAHGAHQSYRQNYLDLDPNYKNVFGQPLLRMTFDWQENDIK MAQFMFDKMAPIAKAMKPKYILGSPKNANSHFDTTTYQTTHMNGGAVMGEDPKTSAVNRY LQSWDVHNVFVIGASAFPQGLGYNPTGTVAALAYWSAKAIREQYLKNPGPLVQA >gi|289777623|gb|GG745508.1| GENE 919 1029594 - 1030931 1706 445 aa, chain + ## HITS:1 COG:PA2266 KEGG:ns NR:ns ## COG: PA2266 COG2010 # Protein_GI_number: 15597462 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Pseudomonas aeruginosa # 3 426 1 422 439 567 66.0 1e-161 MKMQWLSALVLGALSCAAFAEEAPADSNLIKQGEYLARAGDCVACHTNGKAGKPFAGGLP METPIGTIYSTNITPDKEHGIGGYTFEEFDDAVRKGVRKDGSTLYPAMPYPSFARISEAD MRAMYAYFMHGVEPVNVANKDTDIPWPLSMRWPLAFWRGIFAPTPSDFVANPQVDPVLER GRYLVEGLGHCGACHTPRSLTMQEKALSESEGDDYLAGSNAPIDGWVASSLRGENRDGLG TWSEAELAEFLKTGRNDKSVVFGGMSDVVEHSLQYLSDDDITAIARYLKSLPPRGGKQTP APVEDSVAKDLWKGNDSKTGAALYVDNCAACHRTDGAGYKRAFPSLKGNPVVQTEDATSL IHIVLTGSTTPAVKDAVSNLTMPSFGWRLDDQQVADVVNFIRTSWGNNASAVSASDVAKV RKETAAHDEKALGNADISKLPGAGQ >gi|289777623|gb|GG745508.1| GENE 920 1031015 - 1031638 735 207 aa, chain + ## HITS:1 COG:ccmA KEGG:ns NR:ns ## COG: ccmA COG4133 # Protein_GI_number: 16130138 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Escherichia coli K12 # 1 199 1 199 205 207 57.0 1e-53 MLHAERLTCIVDDRPLFAALTLSLAAGELLQVAGDNGAGKTSLLRILCGLARPESGVVSW QGQPLAKVRESFHRQLLWLGHKPGVNAALTADENLRFFFPASRLQQRESALAAVGLAGYE DLPLSQLSAGQQRRVALTRLWLTDAPLWILDEPFTALDATAMETLTRRLEQHARQGGSAI LTTHQPLRPLRCPLRTLRLGGDAGGGQ >gi|289777623|gb|GG745508.1| GENE 921 1031638 - 1032294 1112 218 aa, chain + ## HITS:1 COG:ECs3089 KEGG:ns NR:ns ## COG: ECs3089 COG2386 # Protein_GI_number: 15832343 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 8 218 10 220 220 195 72.0 6e-50 MRALLARELRLAWRSGAEILNPLWFFLIVITLFPFGVGAAPQLLAQIAPGVVWVAALLAA LLVMDRLFRDDWQDGSLEQLMLLPTPLVAVVLVKVVAHWMMSGLPLLIVSPLAALLLGMS LHDACVLALTLLLGTPTLSFLGAVGVGLTVGLKRGGVLLSLLVLPLAVPLLIFATAACQA AAAGLPVSGYLAMLAAFLTASATLCPFATAAALRLTVQ >gi|289777623|gb|GG745508.1| GENE 922 1032344 - 1033081 1014 245 aa, chain + ## HITS:1 COG:ECs3088 KEGG:ns NR:ns ## COG: ECs3088 COG0755 # Protein_GI_number: 15832342 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 241 1 241 245 335 77.0 4e-92 MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLH VPAAMWSMGLYLAMAVAAFVGVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWG TWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAGILVLVGVVNLPIIHYSVYWW NTLHQGSTNLQQTIDPSMRLPLRICIFAFLMLSVTLTLMRLRNLILQLERRRPWVVALVN KGAAR >gi|289777623|gb|GG745508.1| GENE 923 1033078 - 1033308 308 76 aa, chain + ## HITS:1 COG:YPO2737 KEGG:ns NR:ns ## COG: YPO2737 COG3114 # Protein_GI_number: 16122941 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Heme exporter protein D # Organism: Yersinia pestis # 1 64 1 64 100 58 50.0 2e-09 MSPAFSSFAAFLNMGGYAVYVWLAVAVAVAAFGLLTVHTLWARRALFHEVRRQQARERRI AAAREHDKEAADASAS >gi|289777623|gb|GG745508.1| GENE 924 1033292 - 1033750 859 152 aa, chain + ## HITS:1 COG:ECs3086 KEGG:ns NR:ns ## COG: ECs3086 COG2332 # Protein_GI_number: 15832340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Escherichia coli O157:H7 # 1 143 1 143 159 206 71.0 9e-54 MQARRKTRLYIVLAVLAGLGLTVSLTLYALSSNIDLFYTPGEIIYGKTETRALPHTGQRL RVGGYVQPGSLQRDPQTLDVRFKLYDALGVVDVSYKGILPDLFREGQGVVAQGVLDGERH ITAQQVLAKHDENYTPPEVKNAMTPEKTGAQP >gi|289777623|gb|GG745508.1| GENE 925 1033747 - 1035699 3068 650 aa, chain + ## HITS:1 COG:YPO2739 KEGG:ns NR:ns ## COG: YPO2739 COG1138 # Protein_GI_number: 16122943 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Yersinia pestis # 1 650 1 650 656 952 77.0 0 MMPELGNFLLCLAAGLALLLSVYPLWGAARQDRRLMALARPLACGLFACIGGAFLLLVHA FVVNDFTVRYVAENSNSALPVWYRVAATWGAHEGSLLLWVLLLSVWTFAVAIFSRRMPLD AVARVLAVMGMIAFGFLLFILFTSNPFSRGLPQYPIDGRDLNPLLQDIGMIFHPPILYMG YVGFSVAFAFAIASLLAGRLDTAWARWSRPWTQAAWMFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALLHSLAVTEKRGSFRAWTVLLAIAAFSLCLLGTFLVRSGVLV SVHAFASDPSRGLFILVLLIVAIGGSLLLYALKGGRVRARVEHTLWSRESFLLGNNILLM AAMLVVLLGTLLPLVHKELGLGSISIGEPFFNTMFTALMAPFALLLGLGPLIRWRRDDVA RQIKRLIIALVVTLSLSLALPWLLQDRITAMAVIGLMMALWVLIFALLEVHERATHRHGF WHGLRTLTRSQWGMVLGHVGVAVTVIGITFSQNYSVERDVRMRPGDSIDIHHYHFVFNGV RNIVGPNWTGGEGIIAVTRNGRPEATLYAEKRFYTASRMMMTEAAISGGLTRDLYAALGE ELSDGSWAVRLYYKPFVRWIWYGGVLMALGGLCCMLDPRYRMRKKLQEAS >gi|289777623|gb|GG745508.1| GENE 926 1035696 - 1036250 722 184 aa, chain + ## HITS:1 COG:ECs3084 KEGG:ns NR:ns ## COG: ECs3084 COG0526 # Protein_GI_number: 15832338 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 184 1 184 185 296 74.0 1e-80 MNRKLLFIPLVLFLALAAALFWQLMRNADGDDPTTLESALIGKPLPEFRLEALNTPGQTL DRRTLIDGKPLLLNVWATWCPTCRAEHQFLNGLAQQGVRVVGMNYKDDRQKAMSWLQRLG NPYMLSLYDGNGMLGLDLGVYGAPETFLIDGQGIIRWRHAGDLNERVWREELQPLWDQYN RRAG >gi|289777623|gb|GG745508.1| GENE 927 1036250 - 1036708 663 152 aa, chain + ## HITS:1 COG:YPO2741 KEGG:ns NR:ns ## COG: YPO2741 COG3088 # Protein_GI_number: 16122945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Yersinia pestis # 19 148 18 147 170 176 66.0 2e-44 MRGVMGILLALMLTGQAWAVIDTWQFKDEAQEQAFREITSQLRCPKCQNNSIADSNAMIA ADMRQKVYELMQQGKTKGQIVDYMVARYGHFVSYEPPLTAGTVLLWLGPGLFVLAGAGVI IARARRRDIPDAALSAEERQRLAALLKEGKER >gi|289777623|gb|GG745508.1| GENE 928 1036705 - 1037547 1147 280 aa, chain + ## HITS:1 COG:YPO2742 KEGG:ns NR:ns ## COG: YPO2742 COG4235 # Protein_GI_number: 16122946 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Yersinia pestis # 4 280 5 287 408 147 36.0 2e-35 MSLLVVIVALLLAGALGLLYYPWPGKGAVDRDALNRVLYQSRLQELAQERGEDNPALVVE LQRTLLTDIPPQAQPGERPLSRWALLPGALLLVVLSLGLYLKTSDIGQVLLWQQAERHYP ALLQQVKDPTAAPLRMDELAELRLGLRSHLQDTPNDLPGWQLLGRLGLLLNDGETAIGAF GRAHDLAADDPAAAFDYASALVRAGDSGQVRMGELLLRDLHQRQPNSLPVLEMLALSAVR NEDYPEAVAALQALLARLPEGDARREAIVRQLAQAQQQAQ >gi|289777623|gb|GG745508.1| GENE 929 1037813 - 1038331 356 172 aa, chain - ## HITS:1 COG:SP0580 KEGG:ns NR:ns ## COG: SP0580 COG0454 # Protein_GI_number: 15900490 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 2 167 1 166 169 82 30.0 3e-16 MLIRRARPSDAEELAILAERTFRKTFEAGNTQKDMELHCQASYSTDIQLQEILREDWITL VCEYESKLIGYAQLRWEAFPPCVNSIHAGEILCLYIDEPYHGKGFAQALIHKCFAEFAAQ GSDIVWLGVWEQNPRAISFYRKLGFTEVGEHIFLVGTDPQRDIIMKRSTGVS >gi|289777623|gb|GG745508.1| GENE 930 1038357 - 1038818 122 153 aa, chain - ## HITS:1 COG:RSc2436 KEGG:ns NR:ns ## COG: RSc2436 COG0454 # Protein_GI_number: 17547155 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Ralstonia solanacearum # 15 151 14 157 165 97 38.0 1e-20 MDNQHLRFTQGQFTVTTDPAFFQQEAIHDYLSQSSWAPGIDAETVRISIQNSLCFALLDG TRQIGFARLVTDYATFGYLCDVYVLNEYQKSGLGRWLIECCHAHPVMSRLRRIMLVTSSA PWLYQKLGYNPLNQPDFVWQINRPDIYRQPGQK >gi|289777623|gb|GG745508.1| GENE 931 1038881 - 1039483 292 200 aa, chain - ## HITS:1 COG:STM1664 KEGG:ns NR:ns ## COG: STM1664 COG1396 # Protein_GI_number: 16765008 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 199 1 199 200 263 65.0 2e-70 MTKKVNLMTDANAIVNTVNEAVSQRIKQYRKQKKISLDELSRRAGVSKGALVEIEGCRAN PSIALLCRLATAMGVSVADFVDVSSKPTVHLIAEDEIPELWEGEKGGRARLLAGSGGPDM TELWMWEMQPGEKFASPGHAEGTLELFYVQSGTLTLGVKDHLYRVKTGCSATARTDVPHF YENQGESPLVFIMTVHEKTS >gi|289777623|gb|GG745508.1| GENE 932 1039527 - 1040222 302 231 aa, chain + ## HITS:1 COG:STM1665 KEGG:ns NR:ns ## COG: STM1665 COG3382 # Protein_GI_number: 16765009 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 226 1 226 228 318 69.0 7e-87 MLTVSPSIAPEIYRIAPGFRALSICVKAAPVLHPDAGEIALREACEAVVAGEPEWAGSHL AAWADVFQKFGAKPKRTPCSADALRKRVLRDGTMPALDPIVDLYNAVSLRYAVPVGGENI SAYQGSPRLAVANGTEPFDTVKEGETAVEYPSQGEVIWCDDTGATCRRWNWRQGIRTRLG VDAQQMWFILESLPQMPLEKLHEAGKMLTDGLEKMMPGLWFDVALIEEQQQ >gi|289777623|gb|GG745508.1| GENE 933 1040354 - 1040770 256 138 aa, chain + ## HITS:1 COG:mll6376 KEGG:ns NR:ns ## COG: mll6376 COG0329 # Protein_GI_number: 13475334 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mesorhizobium loti # 1 124 42 166 296 104 45.0 5e-23 MGILGSTARYAYLTREQRKRVATLAKQHAGDIQVMVCVGSVRIDAILHLADDAQAAGANV LLLPAVSYQSLRDDEVFSRFETVTRHLSVPVCISDNPGTTHFTFTDELHGRLSSLKGVSS VMFPDEPDSVADSWQRNR >gi|289777623|gb|GG745508.1| GENE 934 1041921 - 1042544 -97 207 aa, chain + ## HITS:1 COG:BH0726 KEGG:ns NR:ns ## COG: BH0726 COG1619 # Protein_GI_number: 15613289 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Bacillus halodurans # 1 205 134 334 338 132 36.0 6e-31 MDLGAQKLDATTQAVWEILESNRGTVIKQYSSTAFQADENQWGTASDGGFNLTQKTQWKR LDGVTSSLTFSGKLIGGCLEIISRLAGTPFGNVPLFKASNSPQGIILYFENVEMAPCEFT RALFSLRLQGWFDNLNGVLIGRSAAPDVSDPTKHNYLDALKAAFENVAVPVLYDVDIGHM PPQISLVNGADATVFFAENGSWVTQQL >gi|289777623|gb|GG745508.1| GENE 935 1042920 - 1043240 60 106 aa, chain - ## HITS:1 COG:RSc2184 KEGG:ns NR:ns ## COG: RSc2184 COG0604 # Protein_GI_number: 17546903 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Ralstonia solanacearum # 2 102 221 322 324 59 37.0 1e-09 MLSRTLGVVRPFGTVASLGQPAGPIPPVRVEELGFARSIALMRPSSLAYSDDAALYRKGA SDLMSALSAGLENHIGAEFILTDAAEAHRVLEAGHTTGSVILTVQA >gi|289777623|gb|GG745508.1| GENE 936 1043946 - 1044188 85 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPGKRGTAWQTLCEPQAQRTFKGRNPAAHSGMVYAKFPGCGRQGTTPGKGEKKNVNPASP YLTSCAFLHMYGAFIPVFFL >gi|289777623|gb|GG745508.1| GENE 937 1044486 - 1044875 147 129 aa, chain + ## HITS:1 COG:RSp0018 KEGG:ns NR:ns ## COG: RSp0018 COG0583 # Protein_GI_number: 17548239 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 115 174 288 302 90 40.0 6e-19 MRFGLYASQFWQEIPQEDWVFIAYDSTLAHVTQQQWLESLLNGRRVIFRASDLMAQQQAA RKGLGIVTLPCFMGDNDSELVRLPENLPSPVRNIWLVAYPEIKRDRSAVVVMDFLAEIIG RSCPPGKDI >gi|289777623|gb|GG745508.1| GENE 938 1045549 - 1046676 1163 375 aa, chain + ## HITS:1 COG:AGpA784 KEGG:ns NR:ns ## COG: AGpA784 COG2141 # Protein_GI_number: 16119756 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 359 1 357 367 564 76.0 1e-160 MSISEPGNHPLQFAYWVPNVSGGLVISNIPQRTSWDIDYNRKLAQIAERAGFDYALTQIR FTAGYGADNQHESVSFSQALLASTDNLKVIAALLPGPWNPTLAAKQIATISHLYGPRIAV NIVSGWFRGEFKAIGEPWLDHEERYLRSEEFIRCLQGIWREDSFTFAGDFYRFRDYSLKP KPLAPLPEIFQGGSSRAARDMAARVSDWYFTNGNTPEGIKAQVDDIRRKAAQNQHQVKIG VNGFVIARESEKEAQAVLREIIDNANPDAVKGFQHEVKNAGSASPEGEGNWAKSSFEDLV QYNDGFKTNLIGTPQQIAERIIALKQSGVNLLLLAFLHFQEEVEFFGREVIPRVRELEKQ SQPAIAHVVPEALKY >gi|289777623|gb|GG745508.1| GENE 939 1046766 - 1047536 1254 256 aa, chain - ## HITS:1 COG:L118271 KEGG:ns NR:ns ## COG: L118271 COG1028 # Protein_GI_number: 15672880 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Lactococcus lactis # 1 256 1 253 253 286 60.0 2e-77 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQA AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD YMTGQSLLIDGGMVFN >gi|289777623|gb|GG745508.1| GENE 940 1047560 - 1049239 2434 559 aa, chain - ## HITS:1 COG:VC1590 KEGG:ns NR:ns ## COG: VC1590 COG0028 # Protein_GI_number: 15641598 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Vibrio cholerae # 13 550 10 547 567 617 56.0 1e-176 MDKQYPVRQWAHGADLVVSQLEAQGVRQIFGIPGAKIDKVFDSLLDSSIRIIPVRHEANA AFMAAAVGRITGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQ SMDTVAMFSPVTKYAVEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVSGKV LPASRAPQMGAAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSAALRHLLEASHIPVTS TYQAAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNSGNATL VHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNIDHRLVLSPQAAEILRDRQHQRELLD RRGAQLNQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYSFRARQVMISNGQQ TMGVALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMV AIQEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAMDVDGPAVVAIP VDYRDNPLLMGQLHLSQIL >gi|289777623|gb|GG745508.1| GENE 941 1049249 - 1050028 1017 259 aa, chain - ## HITS:1 COG:VC1589 KEGG:ns NR:ns ## COG: VC1589 COG3527 # Protein_GI_number: 15641597 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Vibrio cholerae # 4 258 6 260 261 298 56.0 5e-81 MNHSAECTCEESLCETLRAFSAQHPESVLYQTSLMSALLSGVYEGSTTIADLLKHGDFGL GTFNELDGELIAFSSQVYQLRADGSARKAQPEQKTPFAVMTWFQPQYRKTFDHPVSRQQL HDVIDQQIPSDNLFCALRIDGHFRHAHTRTVPRQTPPYRAMTDVLDDQPVFRFNQREGVL VGFRTPQHMQGINVAGYHEHFITDDRKGGGHLLDYQLDHGVLTFGEIHKLMIDLPADSAF LQANLHPDNLDAAIRSVES >gi|289777623|gb|GG745508.1| GENE 942 1050135 - 1051007 928 290 aa, chain + ## HITS:1 COG:STM3121 KEGG:ns NR:ns ## COG: STM3121 COG0583 # Protein_GI_number: 16766421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 292 214 41.0 2e-55 MELRYLRYFVAVARTRHFTQAAKELGISQPPLSQQIQRLEREVGTPLFRRLTRGVELTEA GESFYEDARQILAMSDAALEKAKGIARGMNGSLSLGITSSDAFHPQIFTLLHRFQLDHPG VTLHQMEDNMANLMTALSEAELDIAFVRLPCESSKAFNLRIIDEEPMVIALPRDNPLATQ PTLALEQLCDVAPILFPREVAPGLYELVYNSCLRAGIDMERAWQSSQISSSLSMVNAGFG FALVPQSMTCIQQPNVSYHPLSGAPLKTDIAIAWRRFERSRTVKRFLAMF >gi|289777623|gb|GG745508.1| GENE 943 1051027 - 1051797 1121 256 aa, chain - ## HITS:1 COG:PA2003 KEGG:ns NR:ns ## COG: PA2003 COG1028 # Protein_GI_number: 15597199 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 256 1 256 256 352 72.0 3e-97 MNLHGKTALVTGSTSGIGLGIAKVLAQAGAQVILNGFGDSSHARAEVAALGKIPGYHDAD LRDVGQIEAMMHYAESTFGGVDIVINNAGIQHVAPVEQFPVDKWNDIIAINLSSVFHTTR LALPGMRQRNWGRIINIASVHGLVASKEKSAYVAAKHAVVGLTKTVALETARSGITCNAI CPGWVLTPLVQQQIDKRIAEGVDPEQASAQLLAEKQPSGEFVTPQQLGEMALFLCSDAAA QVRGAAWNMDGGWVAQ >gi|289777623|gb|GG745508.1| GENE 944 1051821 - 1053212 2088 463 aa, chain - ## HITS:1 COG:PA2004 KEGG:ns NR:ns ## COG: PA2004 COG2610 # Protein_GI_number: 15597200 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pseudomonas aeruginosa # 1 463 1 463 463 611 79.0 1e-175 MSVIIALAALALLMLAAYRGYSVILFAPIAALGAVLVTDPGAVGPAFTGLFMEKMVGFVK LYFPVFLLGAVFGKLIELSGFSRSIVAAAIRILGRRHAIPVIVLVCALLTYGGVSLFVVA FAVYPFAAELFRQSGIPKRLIPATVALGAFSFTMDALPGTPQIQNIIPTSFFGTNAWAAP WLGLIGSLFIIIFGLLWLERQRRKAQARGEGYGTDLQNEPETPDDIDLPHPLIAIAPLLL VGVLNLLFTHWIPQWYGASHELTLPGLAKPVVTEVGKITAIWAVQAALLSGIVLVLVCGY RNIRGRLAEGSRTAVGGAILAAMNTASEYGFGAVIAALPGFLVLSKALAAIPNPLLNEAI SVTVLAGITGSASGGMSIALAAMSETFVAAAHAANIPLEVLHRVAAMASGGMDTLPHNGA VITLLAITGLSHRQAYGGIFAITVIKSLAVLFVIATFYVTGIV >gi|289777623|gb|GG745508.1| GENE 945 1053260 - 1054183 1129 307 aa, chain - ## HITS:1 COG:mlr6793 KEGG:ns NR:ns ## COG: mlr6793 COG1250 # Protein_GI_number: 13475669 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Mesorhizobium loti # 6 301 5 298 309 165 31.0 1e-40 MFTPRLAVLGAGLMGVGIACHFARHGHVVRLYDTDPQRLAEVPAVASAILRELEASGQQD PANRDAVLARLTPASTLNALTDATLLIEAIPERLALKHALYAELETLIADEAIIASNTSG LPPDSLAQGMRHPERLLIAHFWHPPHLIPLVEVVPGSATLPHLARQVSDFCAACALEAVV LNRAAPGFVGNRLQFALLREALHIVHSGIASAEVVDQVMRASLGRRYAMVGPLEAADMTG LATVQDICQHLLPELASGSEMMSLVAEKVARGDTGARSGQGFYRWDEARQQRIQSRREHQ LRYALKP >gi|289777623|gb|GG745508.1| GENE 946 1054195 - 1055376 1456 393 aa, chain - ## HITS:1 COG:PA2001 KEGG:ns NR:ns ## COG: PA2001 COG0183 # Protein_GI_number: 15597197 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 393 1 392 393 489 69.0 1e-138 MTDIAIVAAVRTPVGSFRGAFAPLSAVDLGAAVVRSLLERGQLPAAAVDELIFGQVLTAG CGQNPARQTALRAGLPIDTPAVTVNLVCGSGLKAVQQAVQAIRCGDAEIVIAGGQESMSN APYLMHGARDGLRFGHASLQDSMILDGLWDAFNDYHMGITAENLADAFDISRERQDAFAA GSQRKAAAAIVAGRFREEIVPVSVPQGKKPPRVVTDDEQPRPETSEQQLAQLRPAFRPAD GSVTAGNASSLNDGAAAVLLMRVDKAHELGLPVLARIVSSAVAGVDPSVMGIGPVSACRK ALQRAGWTLDEVDLIEANEAFAVQALAVGQLLEWDSEKVNVNGGAIALGHPIGASGCRIL VSLVHEMQRRGASKGLATLCVGGGQGIAMTLQR >gi|289777623|gb|GG745508.1| GENE 947 1055386 - 1056042 870 218 aa, chain - ## HITS:1 COG:PA2000 KEGG:ns NR:ns ## COG: PA2000 COG2057 # Protein_GI_number: 15597196 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Pseudomonas aeruginosa # 2 217 3 218 218 340 81.0 1e-93 MLTREQMAMRVAQELRDGDYVNLGIGIPTLVANYIPAGIEVMLQSENGLLGMGEFPDEAT IDADMINAGKQTVTAQTGAAIFDSAQSFAMIRGGHVDLTVLGAFEVDVAGNIASWMIPGK MVKGMGGAMDLVAGAQNIIVVMTHASKNGESKLLPQCTLPLTGVGCIRRVLTDLALLDIV DGTFVLREVAPGVSPDEVMRKTAGRLIVADDVREMRFS >gi|289777623|gb|GG745508.1| GENE 948 1056044 - 1056751 1086 235 aa, chain - ## HITS:1 COG:PA1999 KEGG:ns NR:ns ## COG: PA1999 COG1788 # Protein_GI_number: 15597195 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Pseudomonas aeruginosa # 1 232 1 232 232 366 83.0 1e-101 MAGLDKRVASYEAALEGLTDGMTLLAGGFGLCGIPENLIAEVQRRQVQGLTVVSNNCGVD GFGLGMLLASRQVSKVVASYVGENALFEQLVLSGELAVELTPQGTLAEKIRAGGAGIPGF YTATGYGTPVAEGKEVRQFDGRHYILEEAIRGDFALVKGWKADWYGNVVYRHTAQNFNPL MATAGRITVVEVEEIVPPGELPPSAIHTPGIYVDRLIVGQFEKRIEQRTLRAGGK >gi|289777623|gb|GG745508.1| GENE 949 1056892 - 1057782 1085 296 aa, chain + ## HITS:1 COG:PA1998 KEGG:ns NR:ns ## COG: PA1998 COG0583 # Protein_GI_number: 15597194 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 290 1 288 306 326 64.0 4e-89 MRMSVKQLRAFLAVAHTLNFAHASERLNLSQPALSLTIKGLEEALGGALLQRSTRKVTLT QEGELFLPMARQLLADWDNVEEAMRQSFTLQRGKISVAAMPSFAANVLPEALKAFRDRYA GVNVTVHDVINEQVIEMVREGRVEMGIAFEPSPTHNLLFTPLAVDRFVAIVPRQSPLAKK KQLTWQELLTLDFITLQRPSAVRLMLEEALARSGRRLDVALESHQLVTVGRMVASGLGGS AVPALCKTQMTSLGAVCIPLSDPPIEKCVGAIHAGHMPLSKAAQALLDTLKGFLPA >gi|289777623|gb|GG745508.1| GENE 950 1057830 - 1057970 229 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEIDLDNLVFNGLDEAEERNAERLEEADKKAQAIVADDDCGDACKI >gi|289777623|gb|GG745508.1| GENE 951 1058261 - 1059169 783 302 aa, chain + ## HITS:1 COG:VC1317 KEGG:ns NR:ns ## COG: VC1317 COG2990 # Protein_GI_number: 15641329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 70 290 69 296 306 84 29.0 3e-16 MEHTVAGAIKEWRKHNKVIGQVKINYKKILRKCRELSLAGGKYREYQELCAKYQCARLTA VTKGLVPFEDKPFKAYLNKRLSKRRKLDIAHGSLNFIEKTFHPDVLPQLYNVADFGRAMF SIPLKNGDNLDVKLLASPFQEEGELMLQLFLGDRRVYSVCFSCTDDGRAYIGGIQGGKDI TNDEVKVLTKELHGARPKNIIMSVLYGFLRYFSITTFYAIDSDFHVKSDLVKASYSSLWL EMGGEKQARGWYKLPAQEIKKSIEEVKSKHRSQFIKREGVKELIQIDMANALQHITLQAR VN >gi|289777623|gb|GG745508.1| GENE 952 1059252 - 1060469 1335 405 aa, chain - ## HITS:1 COG:AGc2694 KEGG:ns NR:ns ## COG: AGc2694 COG0477 # Protein_GI_number: 15888785 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 368 97 463 498 188 34.0 2e-47 MSLRSLRALCLTSFFIADVRDGLGPFLGIFLTQRHWQAEDIGLLMSVGGIAGLLATLPAG FITDSSRHKRLLLAGVCLVITLTTLLLWFSQKTSVVALSQVASGICAAFVGPLIAGITLG LARQRGFSAQMGKNEAFNHAGNFFTALMAGAIAWYWGIGGIFILMACTTLLTLVALLAIR GGDIDDDAARGIEAASTPSLPGFAILFRHTPLLIAGVTLMLFHLANAALLPMLSMRIAAA PGHLNPGLFAAATVIISQVVMIPVAIRVAGSIDKYGYWRCILLALLIMPIRAALAASSDA PAMMVPVQILDGLAAGILGVAVPSFIVSLLRGSGHVNAGQSVVMLMQGAGAAMSPALTGS IAGHYSYATAFGVLSVIAIVALMVWWRSAPLLTVSASPPIGESGQ >gi|289777623|gb|GG745508.1| GENE 953 1060647 - 1061108 632 153 aa, chain - ## HITS:1 COG:RSp0080 KEGG:ns NR:ns ## COG: RSp0080 COG1733 # Protein_GI_number: 17548301 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 13 142 21 151 183 92 35.0 2e-19 MSKNKSLPYLDPALCGLAEGAKILGDRWVLLILREAFYGVTRFETMLSHTHITRQTLTTR LKTMTETGLLSKVPYREAGSRERYEYVLTDKSRSLALVLFALIEWGHQHVLHSAPHIALV DSASGEAVHPGFITASGTVASPAALQIVKADER >gi|289777623|gb|GG745508.1| GENE 954 1061169 - 1061417 332 82 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2228 NR:ns ## KEGG: Kvar_2228 # Name: not_defined # Def: 4-oxalocrotonate tautomerase # Organism: K.variicola # Pathway: Benzoate degradation [PATH:kva00362]; Dioxin degradation [PATH:kva00621]; Metabolic pathways [PATH:kva01100]; Microbial metabolism in diverse environments [PATH:kva01120] # 1 82 1 82 82 132 100.0 4e-30 MPFVNVQTIKGIMTAEQKSELLRRMTDLLVEIEGQGDPQFRQSVWIRIDEHDPEQWSLGG VQPTAAMIAAKFAAARRDGSPE >gi|289777623|gb|GG745508.1| GENE 955 1061604 - 1062797 1484 397 aa, chain + ## HITS:1 COG:RSc2316 KEGG:ns NR:ns ## COG: RSc2316 COG0477 # Protein_GI_number: 17547035 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 13 388 7 383 399 334 53.0 1e-91 MSTEHMLPLAVQNKNILRLAAAQALAGANSVVFYATGAIVGNAIAPSPSLATLPITLFVL GMAASILPFGALARTRGRKAAFRLGTGAGMVTGLAAALAVVLNSFLLFCLAAMLGGAYAA VALSFRFAATDGVAPARRARALSLVMGGGVAAGIIGPMLVTGTMHLWPAHTFAVTFLAQA LVAVLAAFLLRGVTPAEPTAASVRGGRPLREIVRQPGFATTVFSGAVAYMVMNFLMTAAP LSMHMHGLSQQAANLGIQWHVMAMYGPGFFTGRLIQRFGAVRMAAAGLLITAASVAVGLS GLGVYHYWLSLILLGIGWNFGFTGASAKIIDFHRPEEKTQVQSLNDFLVFGVMIVGSFSS GVLLNAFGWNAVLWGSLVPVAVALLTLLLRPLSPPRA >gi|289777623|gb|GG745508.1| GENE 956 1062926 - 1063885 963 319 aa, chain + ## HITS:1 COG:RSp0554 KEGG:ns NR:ns ## COG: RSp0554 COG4275 # Protein_GI_number: 17548775 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 3 299 10 312 323 215 42.0 8e-56 MHLLILNLTTSQATLRMRVWRTLKQSGAAVLRDGVYLLPDVRQGYDTFLSTCQAIRAEGG TGYVFTIEAAEEEALRPLFDRREQYDALLQDLQALQGTLCNDELAAQLKQLRKIQRDYRR IEAIDFFPGAAREQAAERLATIEQVINQRLSPNEPQSVAGELSLLDRGAFRGRLWATRRR PWVDRLASAWLIRRFIDDEALFLWLAAPEDCPATAVGFDFDGAPFSHVGTLVTFEVLVRR FALDAVIPDSLGRLIHFLDVGGVPTPEAAGVESILAGLRETITDDDQLLAAACSLFDGLL RSCEMRSGNHEQNGRSSAE >gi|289777623|gb|GG745508.1| GENE 957 1063854 - 1065221 1483 455 aa, chain + ## HITS:1 COG:SMc00808 KEGG:ns NR:ns ## COG: SMc00808 COG2059 # Protein_GI_number: 15964506 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Sinorhizobium meliloti # 19 445 31 472 480 326 47.0 7e-89 MSKTVVLPQSDSPSVVASVSFWQAFRFWLKLGFISFGGPAGQIAMMHQELVDNRRWISEG RFLHALNFCMVLPGPEAQQLATYIGWLMHKTWGGVIAGVLFILPSLVLLIALAWIYLVWG DVAVVAGIFYGIKPAVAAIVLQAAHRIGSRALKNGAYWAIAAAAFVAIFALNVPFPLIVL AAALVGFIGGRLASTTFGKADAHRAQSHPGGAAIIDDTTPIPAHAIFSWRRTSRVLIAGM LLWLVPMAALTLMLGWAHPLTQMSWFFTKAALMTFGGAYAVLPYVYQGAVTHYGWLTAGQ MMDGLALGESTPGPLIMVVTFVGFVGGYTKAVLGVDDVLLGGIAAACLVTWFTFLPSFIF ILTGGPFIETTHNKVGFTAPLTAITAAVVGVILNLALFFIWHSVWGPSGFDPWSAAIALG AAGLLFRYKWKLTWVLAAAAAVGLIVHMAGLSGAG >gi|289777623|gb|GG745508.1| GENE 958 1065312 - 1065650 331 112 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2232 NR:ns ## KEGG: Kvar_2232 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 200 99.0 1e-50 MIQFFSDYREANMTQQIDIEKIKAALNAIEELEQIARSTQPADIKNFCVEYNKTWKKKVD TLLALIIDEPISSLLVKLVPYLPTLLLIINMLKAGVEQYCQLHLAEEPPVDK >gi|289777623|gb|GG745508.1| GENE 959 1065647 - 1066075 468 142 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2233 NR:ns ## KEGG: Kvar_2233 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 142 1 142 142 266 99.0 1e-70 MVWRVAKSLLILRDQINQYAPHRNKDSDGTIGDEHHAHTNSDHNPQVIDGNIGVVTAIDI THDPLHKCDAQAIVDALVANKDKRIKYIIWNKRIISASVQPWVWRDYHGPSPHDKHFHLS VVPVKALYDYTLPWLLFNPHKE >gi|289777623|gb|GG745508.1| GENE 960 1066077 - 1066553 421 158 aa, chain - ## HITS:1 COG:no KEGG:KPN_02043 NR:ns ## KEGG: KPN_02043 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 158 1 158 158 290 96.0 1e-77 MSDAISSQLENIITMLIAISIASERLVEIIKGYFPWLNLENQDPVIEGRRKSALQILAVV AGILTAFLTQPFVAGSFSAIKHPDLMTLCIGLMASGGSAFWNVILNYLLQVKNLKKQQVS SVKADPVADPAPPSPVYHDVVPGAEPVSSNPCFNPEGK >gi|289777623|gb|GG745508.1| GENE 961 1066937 - 1068355 1789 472 aa, chain - ## HITS:1 COG:all4443 KEGG:ns NR:ns ## COG: all4443 COG0277 # Protein_GI_number: 17231935 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Nostoc sp. PCC 7120 # 16 445 12 439 446 332 41.0 1e-90 MTDEQRQHAVAAIQQALPTLEWTLQPAKIKRLSRDFHWFSPVLTEQLAGKQADAVVRPRD EEELRQLVAACAQHQLPLTLRGSATGNYGQLVPLEGGLLVDMTGLNQIVALGNGTVRAQA GIRLADIETAARPTGWELRCMPSTYRLASLGGLYGGGFGGIGSINYGPLAAPGNVLSVKV MTVEPVPRVLTVPAPEALLLHHAYGTNGIILEVELALAPVHQWIERLDVFDDFADALNYA NACVRSPGLVKRQVALLATPIADYFSHLNDHYRTGQHAVISLIAEESEGLCASLLQRHRG SNVIRQASDEARTQNASLMEYCWNHTTLHALKVDNTLTYLQTAFDPLRYPQQILQMEQHF AGEVISHIEFLRDIEGNLTASGLQLVRYTTPARLNAIMQIFRDNDVKINNPHVLQVEDGK QGVIRPDVVAVKQSLDPAGLLNPGKLRGWALRDQLELDSNPLARATRESPTT >gi|289777623|gb|GG745508.1| GENE 962 1068385 - 1069200 1344 271 aa, chain - ## HITS:1 COG:mll1292 KEGG:ns NR:ns ## COG: mll1292 COG0600 # Protein_GI_number: 13471349 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Mesorhizobium loti # 14 269 25 280 282 209 46.0 3e-54 MKNTTSTPWVQHPRFLKILYPTLVAVAVVLLWQGAVSYFRIPAFLVPSPLVMLESLWTHL TPLLLALLFTLKITLISFLLSIVIGAAVAFILVQNRFVETALFPYIVFLQVTPIVAIAPL IIIWVKDATLSLVVCATLMAVFPIISNTTQGLRSVSPGLLSYFRLNHASRWQTLVRLRIP SALPYFFGALRISSGLSLIGAVVAEFVAGTGGTNTGLAYQILQAGYQLDIPLMFAALLLI SLAGIALFGVMSWVSRRALSAWHESEAVQSH >gi|289777623|gb|GG745508.1| GENE 963 1069202 - 1070032 291 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 16 240 1 225 309 116 32 3e-24 MNTAPKLTVMSDTRFMPASATPAIEVLSAEKIYSNGTRALLPVNLTINQGEFITLLGPSG CGKSTLLKMVAGLVEPSDGKLMLWRRDSREKAQHPLSFVFQEATLMPWSSVRNNVRLPLD LAGVPRAEGNTRVSEVLELVGLGKFADVLPRELSGGMQMRVSIARGLVTRPKLLLMDEPF GALDEITRNKLDSDLLRLWQEQNLTVVFVTHSIHEAVFLSQRVIMMAARPGRVVEDIAIR EPFPRSEAFRVSPAFSLYARQLQDSLLQASQSGMES >gi|289777623|gb|GG745508.1| GENE 964 1070029 - 1071012 1392 327 aa, chain - ## HITS:1 COG:mll1296 KEGG:ns NR:ns ## COG: mll1296 COG0715 # Protein_GI_number: 13471351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Mesorhizobium loti # 25 320 24 324 334 211 41.0 1e-54 MNTRPTLVFTLLTVAALATSASCFAAEKFTFLTNWYAQAEHGGFYQAQATGLYQHAGLDV EIKMGGPQINVMQLMAAGQADCTLGDNGQALETWQAGVHAVTVATVFQHSPTVFITHNKV ENPAELKDKTFLLATEAYTSFWPWAKSELGLAGSKVRPYTFNVQPFLADKNLVQQGYVTS EPFSVAKGGQPFYVYPLSDWGYPPYGNSIICMADTIRKRPAAVAAFVKASMEGWKSYLQD PTPGNSLIAKANPQMSAEQIAFGIAQMKQYQLVTGGDAKTGGIGIITEPRLKKTWDMLVK NKLIDASKVPFEQTYTLEMVKDAGVMP >gi|289777623|gb|GG745508.1| GENE 965 1071012 - 1071893 933 293 aa, chain - ## HITS:1 COG:alr1374 KEGG:ns NR:ns ## COG: alr1374 COG1402 # Protein_GI_number: 17228869 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Nostoc sp. PCC 7120 # 2 258 1 259 262 269 49.0 5e-72 MINGYIPAARFLPFLSWTDVAALPDKSNTVIVLPTGAIEQHGPHLPCSVDSVISSGVAGH ALARLPAAIPAYAIPPIVYGKSEEHLHFPGTLTLSGDTLLHTLLEIAESLYRAGFRKLLM INGHGGQPQILQIACREMRLRHGDFIAIPHDVFNVPNCEKQFLSPHEQRMTMHAGHSETA LMLALAPECVHMERAVANFPPEFPCPTLSKGRPAAAWASYDFGPSGVIGDPTPATREQGE GLLDSLAASWAQAIIEIHRMAWVERHEPTWGKQHWHGFVQSLPPSFAAESKEP >gi|289777623|gb|GG745508.1| GENE 966 1071890 - 1072369 494 159 aa, chain - ## HITS:1 COG:PAE3003 KEGG:ns NR:ns ## COG: PAE3003 COG0251 # Protein_GI_number: 18313754 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrobaculum aerophilum # 7 143 10 119 126 66 29.0 2e-11 MSLEAGAGAPLARYAAWRRAGDFIFLSGIIPVNPLTGTIVNGFQDVPEPVRELLGATGEF STDAKQGPILAQSWYVLESIRHTVASAGGQMSDVIKLVQYFRNLDHFPYYSRVRKLFYPD QPPVSTVVQVSEMLPDATVLIEVEATVWLPQPIHSEAPR >gi|289777623|gb|GG745508.1| GENE 967 1072359 - 1073642 1289 427 aa, chain - ## HITS:1 COG:slr1237 KEGG:ns NR:ns ## COG: slr1237 COG0402 # Protein_GI_number: 16330119 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Synechocystis # 53 417 72 437 450 133 29.0 6e-31 MTFPSSSAPLAGISRARLPAWALPDGWPTQANGEPVLADLAFRDGRIAALTPTDQPAPGL WDLAGALTLPGLVEPHAHLDKTFTIERCRPAQAGLLAAIHAMHEDRQHWTRADIQRRASA ALARAAANGVTHLRSHIDWFTADAPDAWQELARLDTVGITLERVALVPLTLFRDPADAGA IARTVATSGEGCLLGGFIHSSNWDAAAMANLLDSAARWDLDLDLHIDEELSEVSQGLTWL ADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGR TPRQRGITLLHEAQAAGVATLVGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDRQS RLICDRAALTGSPADAAPFAIGAAASVVIFPGSDRFTWPLNSAARLVVNHGRLTHRRVWQ EEMAHES >gi|289777623|gb|GG745508.1| GENE 968 1073654 - 1074622 532 322 aa, chain - ## HITS:1 COG:PA4905 KEGG:ns NR:ns ## COG: PA4905 COG1018 # Protein_GI_number: 15600098 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 6 322 1 317 317 247 45.0 3e-65 MHSHDLISVSVGEIRPNGEGNLSLILQAAAGEILPAYSAGAHIDIIIPGVGPRQYSLCGT PDRSNTYEICVRLTDTSTGGSRYLHQQVKSGDRLAISPPRNHFPLPEAGRYLLFAGGIGI TPLLAMAEAIAARKGALELHYYVASSRQTAFSPRLTQLAAGGTVAIHCSEEGASFRQRIP ACLTTPDPDTAVVACGPEGFIQRLQSVMEEYRWSPSQFVFERFTPAAENNTAAKNAFYIE LASSGQRLQVAADQTIAQVLQHAGVEVMLSCEQGMCGSCITGVLDGIPEHRDSVLTAEEK AGNDQITLCCSRAKSPVLVLDL >gi|289777623|gb|GG745508.1| GENE 969 1074830 - 1075729 1022 299 aa, chain + ## HITS:1 COG:PA0233 KEGG:ns NR:ns ## COG: PA0233 COG0583 # Protein_GI_number: 15595430 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 10 292 14 296 313 161 33.0 2e-39 MFAFSRFLLYFTEVARQGSFRKASEALHVSASSIDRQILRVEQELAMPLFERHPTGLRLT AAGELLLHAANNWKKDFTRVCEQLDDLRGLRRGHVRIATIDAINRHFFSTMLKEVHKHYP NISFTLTTINNIHIQQALISGEADFGIMLNPQTSRELQVRAFAEMNMGIVVPTGHPLASR SAVRFSQCIDYPFILPSAPLMISEPVEALVNISGNEVKEVAVSNNIHMIRTLIKEQMGIG ILCRLDILDEIESGQLAFVPLTDPQLKPFTLALCVSPARQLSLAASMMLNQLEMLFSQL >gi|289777623|gb|GG745508.1| GENE 970 1076015 - 1077004 1274 329 aa, chain + ## HITS:1 COG:CC2633 KEGG:ns NR:ns ## COG: CC2633 COG0715 # Protein_GI_number: 16126868 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Caulobacter vibrioides # 9 322 7 330 334 203 38.0 3e-52 MKSRARLPRGFRWLGLMALGGVSLAVQAEEKIVLLTSWYAQAEQGGYYQAQATGLYKKYG LDVEIRSGGPQVNGMQLLLSKRADVIIGYDLQLLEGIQRGFQAKAIAAPFQYDPQGLLTH ADVTSLQGLKDKTLLVSSSGQATWWPWLKAQYQLSDAQVRPYTFNIQPFVVDDAVAQQAY VSSEVFQVQKAGVKANFFLFSEHGYPPYGGILIARPDTIAERKAAMAKFVRASMEGWVSY LNNPAPGNALIKQDNPKMTDDLLAWGVTQIREHHLIDGGDAASQGWGTMTDARWQKTRDF MVSAGLLAAATDWKQAYTTEFVQAMQVKP >gi|289777623|gb|GG745508.1| GENE 971 1077016 - 1078434 1906 472 aa, chain + ## HITS:1 COG:PA0142 KEGG:ns NR:ns ## COG: PA0142 COG0402 # Protein_GI_number: 15595340 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Pseudomonas aeruginosa # 29 462 26 444 449 239 37.0 1e-62 MSLMIKNAHAILSGLPGEAARLAGPDIRIRDGKIAAIGSLTPLPEERQIDARDCVIYPAW VNTHHHLFQSLLKGEPQGLNQSLTAWLSATPYRFRAAFDEHTFRLAVRIGLVELLRSGCA SVADHNYLYWPDMPFDTSEIVFSEGEALGMRIVLCRGGATQGRAVEQDLPVALRPETFDG YMADIERLVSRYHDPRPDSLRRVVMAPTTVLHSAPGAQLREMAKLARQLGIRLHSHLSET VDYLDAARQKFAMTPVQFCAEHDWLGNDVWFAHLVKLLPEEIALLGRTGTGIAHCPQSNG RLGSGIADLLALEQAGVPVSLGVDGAASNEAADMQSEAHAAWLLQRARKGMLAQPRYAGG TFEGGADAATVEDVVRWGSAGGAQILGLAQTGTLQVGMQADLAIYRLDDPRYFGLHDMAI GPVACGGRAALKALLLNGRPIVEDDAIPGLDLDAMRHDALAAVRTLQQRAAV >gi|289777623|gb|GG745508.1| GENE 972 1078455 - 1079444 1171 329 aa, chain + ## HITS:1 COG:SPCC965.15 KEGG:ns NR:ns ## COG: SPCC965.15 COG3491 # Protein_GI_number: 19076026 # Func_class: R General function prediction only # Function: Isopenicillin N synthase and related dioxygenases # Organism: Schizosaccharomyces pombe # 32 276 5 250 321 125 32.0 1e-28 MNATTQNQRYALQELEKEALMGAQGEETFAREVRCIDLSNFAERKNDIAEQLWEAAVEIG FFQVSHHGIPLADIRQAFSMTEAFFDLPDEVKRQYPLAGNAGWESKAQVRPSTRTPDQKE SYQITRPLMAGRWPSDRELPAFKQTMLGFESQCWQLGMKILSCFALKLGFPESFFTTAHD PQRDTYQSTLRMLHYYATEQSQQGMWRAGAHTDFDCLTLLFQRPGQGGLQVCPGKDRESQ QWTSIEPREEVITCNIGDMLMRWSDDQLPSNFHRVRNPLPHEYQGPRYSLAFFCQANKDV EILGPQRKYPPISAEDYLQQRIQANFAKG >gi|289777623|gb|GG745508.1| GENE 973 1079460 - 1080242 604 260 aa, chain - ## HITS:1 COG:AGpA346 KEGG:ns NR:ns ## COG: AGpA346 COG1349 # Protein_GI_number: 16119470 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 233 16 248 268 281 59.0 7e-76 MSKRKEDRQQQILRELAETPTLRIGDMARTHGVSTETIRRDLDELTRRGVLNRTYGGAVR AMNSEPTVTERHQLFTEERERIARDAVHCMREGKIFMIGSGATTVHVARRMASELRDITV ITHAFGVATVLSMNPTIRVIVAPGEYCATEGAMTGAQTLQFLNQFTADYTLLGASGIAAD GPSEALIDSGTVYRAMIQRAAKSIVVADHSKFDLTYPYHYAGWSGISRLITDQPLPDHLA TVLGREKVVVARGHAAPEQQ >gi|289777623|gb|GG745508.1| GENE 974 1080335 - 1081672 1459 445 aa, chain - ## HITS:1 COG:AGpA358 KEGG:ns NR:ns ## COG: AGpA358 COG0160 # Protein_GI_number: 16119478 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 432 27 450 464 483 57.0 1e-136 MNNKTPILQLNRFDALTGVADENLSRQIARRHATQGTGSVLFYPQPIVMASASGAWMEDS AGNRYLDMYNNVPGVGHCHPHITQAMVRQAGLLNTNTRYLFPVLEQYADSLLATFPAGLS NVIFTCTGSESNDIALRMARFISGRQGIIVTESAYHGNTTAVMEVSPSGHKEALLPPWVH TIPAPDLRRLSAGQTLSDLFAADVERAMDELDERGYGCAALLVDTIFSSDGVFADPPGFL AQAVARVQARGGLFIADEVQPGFGRTGSHFWGFQRHSVQPDIVTLGKPMGNGFPMAAVIT RPAILQAFSEKTEYFNTFGGNPVAAAVGLAVLEVIEQEALMNNAQRNGDYLRAGLRQLAQ DFPAIADIRGAGLFNAIEFARPDSGEPDPQLTSRVIYHLKLEGVLIGAAGRFGNSLKIRP PLCFSRDDADFFLERLAKVMGRLNG >gi|289777623|gb|GG745508.1| GENE 975 1081662 - 1082693 790 343 aa, chain - ## HITS:1 COG:AGpA360 KEGG:ns NR:ns ## COG: AGpA360 COG2334 # Protein_GI_number: 16119479 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 326 28 353 355 323 47.0 3e-88 MFNDEYLTTLTLKLRPLLPRWGLSEGAEIGLLTVSENATFLVSDKMTQRKIVLRVHRPNY SSAVEIHSELMWLNALHARGDINIAVPLVLDDGTCIASLIDGETVTHVVGFTFVAGSEPD TGSHLTGWYHALGRVAGELHRHSEGWVKPEGFHRKVWNTETIIGRHAWWGDWRKMTQLSA DDITLLEAVEATVVARLEAYGQGADRYGLVHCDMRLANLLVNENSLTVIDFDDCGICWFG WDFATAVSFIEDDPALADYRAAWLAGYRSVRPFSQQDEVMLPVLVMLRRLQLTAWLASHS ETATARRYSPQWGAITVRLAQAFLVQASPLSATVNCKEPADEQ >gi|289777623|gb|GG745508.1| GENE 976 1083146 - 1083916 188 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 9 224 7 224 259 77 30 3e-12 MSDFMNKHVLVTGGSSGIGLGIALGFARAGAKVTITARTPSRIDSAIGQAAEQGLTLRGL TCNVSHAEEVKACVAEAAQQWGGLDIVCCNAGIFPSAPLADMSEQQWDEVQAINSKGTFL TVQAALPWLKRAEYGRIILTSSITGPVTGYPGWAHYAASKAAQLGFMRSAALELAGDNIT VNAVLPGNIVTEGLRDMGEDYIAGMASAVPLKRLGTVEDIAAAALFFASRQAGYITGQSL IVDGGQILPESAACLN >gi|289777623|gb|GG745508.1| GENE 977 1083931 - 1085457 1643 508 aa, chain + ## HITS:1 COG:mll6718 KEGG:ns NR:ns ## COG: mll6718 COG0531 # Protein_GI_number: 13475604 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mesorhizobium loti # 1 504 1 505 508 323 38.0 6e-88 MSNEILANPAPAAEKHVVQRLRPNAVGLGGVLFMTIATAAPITAMLGNVPIAVGSGNGQF APAGFMVATLILALFAIGYAQMARFITATGAFYGFISHGLGRIVGMASGVTVTMTYIVFE AALVGIFAFFCEDLINTVFSVHIPWLIFAFAMLMTTGVLSYFDISLTSRVLGLCLVLEIL ILTAVAVAVLIHGGGPQGFVPESINPLNAFTPAKGVVGASAGIGLFFAFWSWVGFESSAM YGEESKNPKKIIPLATLLGVIGIGVFYVFISWMAIAGTGPEQAIALAQDPNRAGEIFYGP ARQYLGEWAVGVFKLLVITGSFACGMAFHNCAARYLYALGRENLFPFAGRTLGRSHSRHG SPHVASTVQTVIATLIVLLFFITGKDPYADIYTLLALLGTMGIMIVQALCAFAVIVYFHG NKENIGKGHWFKTGVAPLLGGMGMIYIVYLLFKNMAFAAGAAASSSFYHAIPWIVLACFC FGAAIAVWFYLFDAQKYRVIGRIVLTDD >gi|289777623|gb|GG745508.1| GENE 978 1085519 - 1086436 717 305 aa, chain - ## HITS:1 COG:PA2316 KEGG:ns NR:ns ## COG: PA2316 COG0583 # Protein_GI_number: 15597512 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 1 289 297 284 51.0 1e-76 MDSLTSLTSFVRTAETLSFVQAARLLGISASAVGKNVARLEHKLGVRLFNRSTRNVSLTA EGAAFLTRCQSILEQIQEAESELTSSLSQPTGKLRISLPVIGYRLLLPAFTAFTRLYPQV ELDLDFSDRLVNLIDEGFDVAIRSGELADSRLIARKLGGFRFVLCASPAYLAEYGVPGSP AELAAHKCIFFRFPSTGLIQPWELRDMRLTGDFRATAVMTVNNIEAAIRLSAAGMGIAYV PDFVVREAMDEGQLQEVLPGCCVKDGHFSVLWPASRYLSPRIRCFIDFMAVAEIPLSPAS ATPPL >gi|289777623|gb|GG745508.1| GENE 979 1086553 - 1088085 1018 510 aa, chain + ## HITS:1 COG:mlr2785 KEGG:ns NR:ns ## COG: mlr2785 COG0477 # Protein_GI_number: 13472476 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 18 502 3 483 496 286 42.0 9e-77 MLLTARTPSRYASALAALSVFMAALLLPLSFTGGVMTTPAIQQSLGGSPAALSWLTNGFM LTFGSFLLAAGVTADAIDRKRIFIAGAALFCLSSLLFCLTHNLFLSGVLRALQGLAAAMI LASGSAALAQLYDGAQRTRAFSILGTVFGAGLAFGPLLIGFMTDAVGWRGVYALFALLSA IVLLIGLAYLPAAEKSEPRTPDNLGLLLFTLALMLFTASLMVIPARGFLSLTTLALLIAS GGLFVAFVVRCRRVNNPVLDISLLRHPRFVGVLLLPVATCCCYVVLLIIVPLHFMGGEGM SESQSALYLMALTTPMLVFPSVAALLTRWFSPGHVSTAGLMMASVGLLLLGNAFHSHHLP QLVLALILCGAGAAFPWGLMDGLAISAVPMAKAGMAAGLFNTVRVAGEGIALAVVSAVLT ASNNLTLQSRVHGYAPEVIDRAAGWLGAGNIPQAAALLPDFSLRALRESYDSAYTLLFSG LAVVTLVCALMVWRTLCRKAGAIQTRDSGS >gi|289777623|gb|GG745508.1| GENE 980 1088229 - 1089302 1071 357 aa, chain + ## HITS:1 COG:no KEGG:KPK_2311 NR:ns ## KEGG: KPK_2311 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 357 1 357 357 704 98.0 0 MAIDPELIYIEILETVLTATLDPDLWKSALQKLALLTGHQYAAFLFYDKGNAHLLTDSLL LEEKVFTAYRDVFLAIDPAEKILTALPVGQMYRDREYLGDKFIAGSVYYNEFHHPNDLNH LTSVKLCTINGYATYLSLMTANTAAYPQPVQFELFRRLIPALKTACQLHARFEQLRDTIK YQSAVMDNGIYPVWLVDHGGKILYASAHAERYLRANARLSWYSGGDMLCLNTDSKKLKRA IEQATRTAEPPKAGLCYTAGRQPKPILVIPAARLAGVACVIIPEPFLTGSALMELFNVKP AENAVAELLVRGMTPGECALHLDVSIATIRTHLSALYRKTHTRHQAELLLILRAIHG >gi|289777623|gb|GG745508.1| GENE 981 1089316 - 1089804 614 162 aa, chain - ## HITS:1 COG:PA2496 KEGG:ns NR:ns ## COG: PA2496 COG2318 # Protein_GI_number: 15597692 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 4 157 9 162 171 94 32.0 6e-20 MDKDTVVTLLKYKRWIDLATLQAIRAIDGTVYGEKRHLTIRLMNHIHVVDMIFRANLRGR PHGYTALNTPETPTVDELEKAMTACTDEYIQYVSAMTPADFHERIAFKFVDGGDGNMTAM EMLNHMLFHGAYHRGAVGWMIGECGGVPPKEVLTVFLRDHHS >gi|289777623|gb|GG745508.1| GENE 982 1089922 - 1090440 570 172 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2271 NR:ns ## KEGG: Kvar_2271 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 172 1 172 172 258 100.0 1e-67 MLKRRTLKTALAAVISLAVMAAPAYANPGNGNGNGGGNHGNSGNHGNSGNHGNNGDHGNK GQNKGQSADEHGNRKNYGKPDHVDSDISFSRARSLAVNYGLVGYQALPPGIAKNVARGKP LPPGIAKKTLPASMINDLPYYPGYEWRAVGDDLVLVALSTAIVTAVINGVFD >gi|289777623|gb|GG745508.1| GENE 983 1090818 - 1091789 1227 323 aa, chain - ## HITS:1 COG:CAC0180 KEGG:ns NR:ns ## COG: CAC0180 COG4608 # Protein_GI_number: 15893473 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 3 319 2 319 321 395 56.0 1e-110 MSERYVIEVDGLKKYFPLRDGLFGQQTGELRAVDGVSFNIRPGTIFGLVGESGSGKTTVG RTLLGLYEKSAGSVKFHGQELADLTAPALRAIRPRMQLVFQDPYSSLNPRLRIGDAIGEA MLQHKLCTRDELYDRVIAVMKICGLAPEHYARFPHQFSGGQRQRIGIARALILNPDFIVA DEPISALDVSIQAQIINLFSDLRDERGVTFLFISHDLGVVEHLCDDVAVMYLGQLVESAS RDALFSRPLHPYTRALLAAVPTLDPHSEPQALMQGEIPDPANPPPGCRFSSRCPQVSERC RREAPALREVAPGHRVACHGVAS >gi|289777623|gb|GG745508.1| GENE 984 1091786 - 1092766 534 326 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 22 320 35 328 329 210 37 2e-52 MTTPLVSFNHLSVSFAGERTRVRAVQEVSFTIQAGQTVGVVGESGCGKSVTAMALMGLLP PQAARIDGGEIRFADRDLLRLKARQMADLRGHQLAMIFQEPMSALNPVLTIGEQLCEPLI RHLGATPKAAWQQAIQLLSEVGLARGDSLMTRYPHQLSGGMLQRVMIAMALSCQPKLLIA DEPTTALDVTVQAQILRLLRDRARASQMAMMLITHDLGVIAQMAEQVVVMYAGRIVEQGA TAEVLRHPQHPYTRGLIASRPVPGERRRRLYSIPGQVPDLAALPAGCAFAGRCERATARC REAIPPLLGERQRAACFYSEFAEATA >gi|289777623|gb|GG745508.1| GENE 985 1092763 - 1093710 1194 315 aa, chain - ## HITS:1 COG:CAC3181 KEGG:ns NR:ns ## COG: CAC3181 COG1173 # Protein_GI_number: 15896429 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 29 313 18 302 302 310 57.0 2e-84 MILSYFASRRRQRQAAIPALAHIPPSPWRQGWRQLRRNRLAMFCLILLAVMAVWCVLGPV WSPWRDDATDALSINQPPGAEHWLGTDFLGRDVYTRLLLAGRISLIIGLLTMVMSVCLGY LLGALSGYVGGLTDKLIMRVADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVVMLSL LEWPRLARLVRGQCLSLRERDFMLATKVLGLSARRRLFGHLLPNTIPILVVMATMAVANA ILSESALSYLGLGVVPPTPSWGNMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGD GLRDAMDPNMKPRLK >gi|289777623|gb|GG745508.1| GENE 986 1093710 - 1094669 1396 319 aa, chain - ## HITS:1 COG:CAC3180 KEGG:ns NR:ns ## COG: CAC3180 COG0601 # Protein_GI_number: 15896428 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 317 1 317 318 361 58.0 1e-100 MKNFILRRLLQTLPMLLLASFIIFMLFAKTPGDFIDGNITLTAARAAELKAIYGLDQPLF TRYLHWLGQLLRGDLGFSLQYQIPVSQLLNQYIWNSFLLASVALVFYWGIGLAVGVVSAL RPGSWFDHLVSVAVFAAMSFPTFFLCLLLIKWFAVDLHWLPVGGMTNTGSDESGWQYVLQ VAAHLALPVLALVMLQAGSLTRYVRASMLDVVKMDFIRTARAKGLQERTVILKHALRNAL LPIITLLGFELPGLFSGAIITEKVFNWPGAGHIHIDSLAARDYPVLMGFTLFLAVLTIVG NLLADVLYAWADPRIRVRS >gi|289777623|gb|GG745508.1| GENE 987 1094715 - 1096418 2033 567 aa, chain - ## HITS:1 COG:CAC3179 KEGG:ns NR:ns ## COG: CAC3179 COG0747 # Protein_GI_number: 15896427 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 40 559 39 558 567 529 50.0 1e-150 MSRLQQGLKTRKTRFALALKVALLGGVVAFSSVAHAEGILKEGITPATDASQIPASAKLR KDTVVAGISEPQGIFNPYFFVNGWDENVTNVIFSRLIDWDSQGKLVPGLAESWTVSPDSK VYTIKLRPGLTFSDGSPLTAEDVAFTLTVLLDPKYDGDTDITLANIAGGADYKAGKADSV SGLKVIDPLTLQVTTTQPGATTLAKIGGPVLSKAWYGKGYQRGNLDYLRSLHGKPLGNGP YVYDKYIPGQEIRFHANSHFYRGTPPTPRFIYRVTNPSTNFQLFQTGETDYDAFTSRPDD IEQLKMLGFANINLYGSSDYSQVEFNVHRPALQDKRVRQALIYGLDRQKLIDVVYQGYGK VAIEPIAPISWAFNAEGVNPYPYDPAQAKKLLDEAGWKPGADGIRAKDGQRLELTLLVSK KVLNDALIPIAKENWRQIGVLLKPQVVDFNALMAQRKAGNYDLASFSTSTLNDPHDGVWD FYSSEAKESGYHNAEVDKLINAGNAVLDIEQRKPIYHQLYKVLADDPPVILLGYRNILSA SSARVSGFKPDIYNGLTGSLPDVKIVK >gi|289777623|gb|GG745508.1| GENE 988 1096567 - 1097610 1224 347 aa, chain - ## HITS:1 COG:PA2350 KEGG:ns NR:ns ## COG: PA2350 COG1135 # Protein_GI_number: 15597546 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Pseudomonas aeruginosa # 6 334 24 360 369 335 56.0 7e-92 MTHIPAPPTHIEFAGISKAYPNGVQALQDIDLTIRQGEIFGIIGRSGAGKSTLLRLFNRL ENADSGEMFIHGESTVRYSTRQLRDLRRRVAMIFQHFNLMATKTVAQNIALPLKMAGVPA GERQRRVSEMLELVGLSALRDSYPARLSGGQKQRTGIARALVTQPEILLCDEATSALDPE NTLSVLTLLKEINQRLGLTIVLITHEMEVIRTLCDRVSVLEGGRIVEQGDVWRVFGNPQH PVTRAMLGLQHPDRPEAGPPLRDGEQIVTLRFDGSSGREPNLQHIASLLGGDARLLYSNC ERIQGRVIGQLQVRLSGPLAASALAQDGWVADSILTHHHQTAETTAS >gi|289777623|gb|GG745508.1| GENE 989 1097663 - 1098439 1085 258 aa, chain - ## HITS:1 COG:XF0873 KEGG:ns NR:ns ## COG: XF0873 COG1464 # Protein_GI_number: 15837475 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Xylella fastidiosa 9a5c # 21 258 23 261 261 265 55.0 4e-71 MKKSIIAAGLLALFSTAALANETLIVGATPVPHAEILEFVKPVLAKEGVDLQVKVFNDFI QPNQQLAEKHLDANYYQYRPFLDNYNQTRHTNLVPVVGVHIEPFGAYSSKYTTLAAVPDG ATIAIPNDPVNTGRALVMLSNAGLITLKDPHNPQSATKDITSNPHHFKIRELEGAMLARA VKQVDLAFIFANYALEAGIDTDKALLVEKGSDLYVEYLVARPDNIQDPGIQKLAQALHSD AVRQFILTRYQGKILPGF >gi|289777623|gb|GG745508.1| GENE 990 1098471 - 1099145 934 224 aa, chain - ## HITS:1 COG:PA5504 KEGG:ns NR:ns ## COG: PA5504 COG2011 # Protein_GI_number: 15600697 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Pseudomonas aeruginosa # 8 224 9 225 225 201 67.0 8e-52 MTSLLAFFAEIDWNDVAQAALDTLTMLAWSLGWTVLLGLPLGIVLYLTGEPRLLYAPRLY RLLSLCVNVLRSLPFIILLIVMIPVTTLLTGTSLGVEGTIPPLVAGCAPFFARLVETALR EVEHGLVEASWSMGGSTWQLIWHTLLPESRAGLIAAVTVTAILLVDYTSMAGVIGGGGLG DLAIRFGYQRFQTDVMVVTVLMLIALVQLLQMSGDRLVRYVSRK >gi|289777623|gb|GG745508.1| GENE 991 1099147 - 1100370 1717 407 aa, chain - ## HITS:1 COG:AGpA773 KEGG:ns NR:ns ## COG: AGpA773 COG1960 # Protein_GI_number: 16119749 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 407 26 425 425 391 51.0 1e-108 MSASSPAQPYTQSTPQAHIIASDAEALAIAHEIAAVLKPGAAERDRTGIVPAEIVNTYSN SGLWGITVPRRFGGAEVSAATLAQVIAILSAADPSLGQIPQNHYCLLEDIRLQGSDDQQA FFFAQVLQGYRFANALSETGGKTVLDIRTRIEEGADGLRINGRKGYCTGSLYAHWIGILA LDADDRAQLAFVPQNSPGLTVVNDWACLGQRTTASGTVLADNLPVNPFHLFPTWKSYASP TLAGPFAQLTTAAIDAGIARAALDDTVAFVRHSARPWIDAGVAQASDDPLTIYHIGQLDS RLAAADALLERAGRVLDRYKNDLSEEHVAEASLAVARAKIWTTEVALEAASRLFELGGTR ATGESLNLDRHWRNARVHTLHDPVRWKYQLLGNWVLNGIRPQRHDWN >gi|289777623|gb|GG745508.1| GENE 992 1100644 - 1101327 447 227 aa, chain - ## HITS:1 COG:CAC0235 KEGG:ns NR:ns ## COG: CAC0235 COG4845 # Protein_GI_number: 15893527 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Clostridium acetobutylicum # 5 207 2 209 212 125 31.0 6e-29 MAHYRIIDTATWPRRDHFTFYRQFANPSFNLCVPIAAQRLYECAKDRRVSFFQLALYALL RAANGVPQLRQRVRNDEVIEYDSLAVMTPVMTVEEGFRQVWCDNAPEFTTFSDAATPKIV AARETTPAPLIVDGEHFICASCLPWLHFTSMTHAEYAVGAAVPALTWGKLQNGVIPVAGR FNHAFVDGLHASRFFALVEEGFSDPERLWQPLTETAPSLLAPAAKKR >gi|289777623|gb|GG745508.1| GENE 993 1101359 - 1101742 455 127 aa, chain - ## HITS:1 COG:lin0429 KEGG:ns NR:ns ## COG: lin0429 COG0346 # Protein_GI_number: 16799506 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Listeria innocua # 1 125 1 124 126 104 43.0 4e-23 MKIAHFALWTQQLDVQARFWVEFFAASINEKYLSQTNPGFASYFVTIDDEVVIELMTRPG LQPACADNNHTGWAHLALSVGGAEQVDALAQRAEDAGILVSPPRTTGDGYYEAVIADPDG NLIEIVA >gi|289777623|gb|GG745508.1| GENE 994 1101833 - 1102603 789 256 aa, chain + ## HITS:1 COG:AGc4939 KEGG:ns NR:ns ## COG: AGc4939 COG1349 # Protein_GI_number: 15889977 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 240 5 238 266 149 38.0 6e-36 MLDYAAFPQQRQALICQILQENGRVVCAELAARLQVSEHTIRRDLHELSRVGFCKKVYGG AVLSLPEAGDYSERKDKNRATKLRIAQQCARLVKPGGTIFVDTGTTNLAMAEALPAELAL TVVTNSPEIAAVLVKKPLYDVVILGGQVQRASGGCVGAAAVAQVQGMLFDQGFIGGCAMA PESGLTGFDYADCEFKKAVIKQCSEIIVGLTSDKIPAVARFVVAASSDIDVLVVEENISR EYRVAFQQHDIRIHTV >gi|289777623|gb|GG745508.1| GENE 995 1102608 - 1103237 851 209 aa, chain - ## HITS:1 COG:STM3959 KEGG:ns NR:ns ## COG: STM3959 COG1280 # Protein_GI_number: 16767229 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Salmonella typhimurium LT2 # 6 205 5 205 206 102 32.0 5e-22 MFLSSLMAIAAVLIMGVISPGPSFIFVARNAVARSRVHGLVTALGTGAGAAIFSIMAMLG LQKVLTAVPELFIGLKVAGGLYLLWLGYKIFRGSAQPMDFSASGMAGNHSLLKTFRDGLY TQLSNPKTALVFASIFTALLPAQIPTAFYYIVPLMSFLIDVSWYSLVALVLSADRPRRVY LRLKRRIDIATATVLGALGLRLIATSLTR >gi|289777623|gb|GG745508.1| GENE 996 1103487 - 1104122 807 211 aa, chain + ## HITS:1 COG:ZcynT KEGG:ns NR:ns ## COG: ZcynT COG0288 # Protein_GI_number: 15800068 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli O157:H7 EDL933 # 1 208 1 208 219 297 66.0 1e-80 MQHIIEGFLNFQKEIFPQRKELFRSLASSQNPKALFISCSDSRLVPELVTQQEPGQLFVI RNAGNIVPSFGPEPGGVSATIEYAVVALGVTDIVICGHSNCGAMKAIATCQCLEPMPAVS HWLRYADAAKAVVEKKTWASETDKVNGMVQENVIAQLNNIKTHPSVAVGLRDHTLRLHGW FYDIESGDIQALDKNTKSFVSLSENPDVFFE >gi|289777623|gb|GG745508.1| GENE 997 1104159 - 1105172 855 337 aa, chain - ## HITS:1 COG:SMc01816 KEGG:ns NR:ns ## COG: SMc01816 COG0604 # Protein_GI_number: 15966202 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 18 337 18 340 340 234 47.0 2e-61 MKAWTVKKPGSLENLQLVDLADPGAPAAGEIRVALHATSLNYHDLLVATGVIPTADRRIL MADGAGVVEAVGAGVNEFQPGDRVVAGFFPQWLDGRPGPLVSDFSQTPGDGAEGFACQYV VRPASHFTHAPEGWSFREAATITTSGLTAWRALVVEGRLKAGDTVLTLGTGGVSITALQL AKSMGAQVIVTSSSDEKLARARALGADHLINYRTTPAWGAAVQDITGHRGADLILELGGP GTLGQSFEAVSVGGHIALIGVLTGFEGHVPTHLLMSKQARLQGLVVGNRRQQQDYVNALN LQASRPIIDKVFDFTALPDAFRYLQSGAHFGKICVEW >gi|289777623|gb|GG745508.1| GENE 998 1105324 - 1105533 271 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSIKTFVAVAALSLFSSVSFAQSVSATASTLDRAEAKIAAQAAEQGASYKITSAQFNNR VHMTAELSK >gi|289777623|gb|GG745508.1| GENE 999 1105640 - 1106332 266 230 aa, chain - ## HITS:1 COG:no KEGG:KPK_2330 NR:ns ## KEGG: KPK_2330 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 225 1 225 238 414 99.0 1e-114 MNILIHSNNLFFNIGLAQCFRDIQETLPGLNIIHSLPLSHFPDPAGLDVIILSLENFHDY QAAAELALRYQSLVVGFTSAGNVRRGRAFFADTLLWVSQRESVPEVGRLLRRLADRRWPL VPRHQRQSTSSRQRAPLNPLERRIIAATMKGQSVNQLAATLGINRKRVYNGLERIKVNFH LVSHAHFHHFMISGPTFNPLSPDLASYTPGAKPARQRQAALHTAENIHII >gi|289777623|gb|GG745508.1| GENE 1000 1106378 - 1106812 187 144 aa, chain - ## HITS:1 COG:no KEGG:KPK_2331 NR:ns ## KEGG: KPK_2331 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 144 1 144 144 285 99.0 3e-76 MTKGYKLLGYKLADNIFYCLHHREIIALRGTRTQVQLRSTMACLLEYLLAHGRERVVSDE ELMVNVWEKNNLRPSAQRLWQVIQTLKSRLSQAGVESALIIRVKCAGYYINNAVVAEIYS FKPPGMMNYINTSPADMNKLLVRS >gi|289777623|gb|GG745508.1| GENE 1001 1107214 - 1107363 138 49 aa, chain + ## HITS:1 COG:no KEGG:KP1_3086 NR:ns ## KEGG: KP1_3086 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 48 1 48 49 68 97.0 1e-10 MVIATRKPLCNKRWSASPASQDLQLTQLRHPWVATKASCKSKKAWKSRS >gi|289777623|gb|GG745508.1| GENE 1002 1107435 - 1108271 651 278 aa, chain - ## HITS:1 COG:RSc2214 KEGG:ns NR:ns ## COG: RSc2214 COG0491 # Protein_GI_number: 17546933 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Ralstonia solanacearum # 6 273 50 323 339 162 36.0 4e-40 MTPAPFYTLTAGDLTVTAVSDGQMSAPLSLLSGITPEEAERLQRNAGLASPEAIAIGAYL IRGRGHTVLVDTGTGGVNGVGGALIVNLALLGVRPEEIDTILLTHAHPDHIGGLLTATGA PAYPNATVFLPSRERAYWLAASTLDNASDRARRNVLLVHRVLAICAAQIREVDGEETVAG IHPCPLPGHTPGHTGYRLEAGDTSLLIWGDIVHFPTIQTTRPSVSVAFDVDPEQARQTRE CLLRQAASEQWLIAGMHLGLPGFARVVETPSGYLLQSV >gi|289777623|gb|GG745508.1| GENE 1003 1108279 - 1108794 324 171 aa, chain - ## HITS:1 COG:no KEGG:KPK_2334 NR:ns ## KEGG: KPK_2334 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 171 1 171 171 335 100.0 3e-91 MLYVVECAYTDPQSETAWNTFYNQEKLPALVSVPGFYASQRFRALSEECPRYLALHDIHD ATVIDSDAYRRNGGGHFARWQSAITDWHRHLYVADSGVREVRSDEVLLLSDTPQTLPISP AIVLLPGGLATQQTRYAAIVPRDDLHHLATAAAVFIYQPITARLRNPAQRA >gi|289777623|gb|GG745508.1| GENE 1004 1108951 - 1109835 976 294 aa, chain + ## HITS:1 COG:PA0448 KEGG:ns NR:ns ## COG: PA0448 COG0583 # Protein_GI_number: 15595645 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 1 291 302 196 40.0 4e-50 MRRKIPSSAALLAFEAAARHGNFARAAAELALTEGAISRQIARLEALLDSKLFDRTGSRV RLNPAGARYARQVREILARLERDTHDVSGMPSDGHSLEIAVLPTFASRWLIPRLGRFAAQ HPHIVVNIAARSDPFILPGSGFDAAIHFDHPAWTGMDVTFLFEEYLLPVCHAALLTNDDL PGQLNRLPRIHRRQNPDAWLLYARECGLALDNPAQGPRYDLHEMAIAAVLSQQGVALVPK MYVESELRAGTLVAPWPGSPTLAKRFCLIKPGGGEGELALQVFERWLQTEIAAG >gi|289777623|gb|GG745508.1| GENE 1005 1109832 - 1110758 1142 308 aa, chain - ## HITS:1 COG:AGpA396 KEGG:ns NR:ns ## COG: AGpA396 COG2207 # Protein_GI_number: 16119504 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 295 1 294 299 239 45.0 6e-63 MSDPLAEVIAMLNLRAVLTKTVEGAGDWRVIRSDQGLSFYGVVLEGGCRLEIDQHEPQIL RAGDFILIPAAYRFALTSLPPPPSPALETIPVQLAEGHFRLGALDKPAQMQALIGHCASG STNASLLASLLPAFVVVRNHPRLATFVGLLKEEAQADRAGKSFVLARMVELLFIEAIRSS GTLATPGLMRGLSDPRVAQAIRLLHQAPARRWTVNALAADCALSRSTLFERFTDLTGMTP MGYLLGWRMTLAMQWLSETGISIADIAERIGYGSASAFSVAFTRYTGISPGKYARQRATQ PPPGPALT >gi|289777623|gb|GG745508.1| GENE 1006 1110857 - 1111609 604 250 aa, chain + ## HITS:1 COG:AGl595 KEGG:ns NR:ns ## COG: AGl595 COG1028 # Protein_GI_number: 15890414 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 244 4 247 249 200 52.0 3e-51 MQTIMITGCSSGFGLETARYFLEQGWKVIATMRAPQEGVLPASDRLRLVRLDVTSAQSIA EAIAEAGEIDVLVNNAGVGMLNALEGASREAIADLFATNTLGTIAMTQAVIPRFRARRSG TIVNITSAVTLQPMPLLAVYTASKAAVNAFTESLALELRAFNIRVGLILPGRAPQTRFGE NARRTMGQLPESYAALGQQILDSIQDNASVTQAVDVAQAVWRMVNDPQAPSRLPAGEDAL AMAQASLRRV >gi|289777623|gb|GG745508.1| GENE 1007 1112505 - 1114793 1516 762 aa, chain + ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 3 546 19 571 571 534 50.0 1e-151 MDVHGCTEFLDVLNFRSVESLSQPWRYDVAVTSSSADIACDALLLKPTSFTFLTPRFDGT PALPVRTVFGVVESFRRISTSNDDTRYALTIVPRIALLDYTKGSEIYLNQSVTEVVEKVL RKHGLEGPDFEFRLSREYPSRELITQWRETDLEFIQRLLAEVGIYWRYEMDSRLEQDVVI FQDSQEQYEFGVMLPLRNQAGMSDSGQESIWDIQTAYKVVSGRVATRDYNYREALTPQDS AESIFSREGITAGETYHYAEPFLTAGDTESTESGAYFARLRHERILNEQYIVSGHSSSPH LAPGQVLETDGTLPDAVRDGIVITTVRTSGSRKNSFTLTFEGIPYSETVCWRPALLSRPV IAGSLPARVESTQKGDTCSWLDPEGRYRVKLDFDRDSTEQGYAYLWLRLAKPYAGDTYGF HSPLLDGTEVAVVFDGGDPDRPYIAYALHDSEHPDHVTSENHTRNVWRTPANNKLRMEDK RQEEHIKLATEYGKTQLNMGHLVNGQREQRGAGFELRTDEYGAVRAAKGLFLTADEQAKA RGPVLEMAPAINQINQANSQMQALNSAADAAGALICDINTQINFVTDKIRDLQSAVLLAS APQGVALTSGEHLQLSSTRNTMINAGQHLDLGAMKNLSVTVEKALGLFVHKEGAKLVANQ GDIDIQAQHNTMGLLAKQQVTITNCEDGISISTPETLTLNGGGSYLKLSKNGIEHGSEGM MVMKVANYLIPGTGASLKGVTETFRKTTLELVPPRRRGRISR >gi|289777623|gb|GG745508.1| GENE 1008 1114803 - 1116485 1100 560 aa, chain + ## HITS:1 COG:no KEGG:Ctu_19480 NR:ns ## KEGG: Ctu_19480 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 560 1 560 742 870 73.0 0 MKISYPLRDTNGKELCALDDVMRLIDGEAHGTWLLGANGLWHGGIHISDVSNPFSALKPD AVNTEEPVPLQFMADGTVVAYRINNEYLTAPYCGQQLRYSSSFVLVKSQCKPDPQKEKSW LEFYSLYMHLAPVADYPKSPCYKVRDGHSGILLRQYKNGQYGLPEGEPDNGEAGTYPAPA KTKKSLSAGDRFVSSRTGRFYVTKNGNATLTTFGLVRLLKDSVPGKEQYWVTLDPVLVEP DGEIQGLMPEWMQKAKQKGAFDAVELTEGTEEWKVSAGTPVGFMGCMESPGEGNQLVDRE WFVHLEVLSTDSRMPGFLANPACVKGEKRSVLAPKGKSLFTRQDAAGQPVFTPTSARLGA QCQLSRGAATPVSDESQKWWYKVSGSGWLPQNDVEEVNQYDLEKLGFQALEESSGGDVMN SPYESWIPQAFGAISRTAEQGAGYQYGLVPQLYRDLMAEMDSNRDGKVTAEEIRQALAVR DPLVKNVVNRLIVKHHSEWYGGRSTGRWEGFYKDLDSLEVKYCEKWQADLEWMSKVPPFD KDEAVWHFHPVVFLNSLEEN >gi|289777623|gb|GG745508.1| GENE 1009 1117585 - 1118112 -100 175 aa, chain + ## HITS:1 COG:no KEGG:Dda3937_03228 NR:ns ## KEGG: Dda3937_03228 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_3937 # Pathway: not_defined # 1 175 103 272 272 125 39.0 1e-27 MDSIDTSLILSGKVNYLPIIIYNDKDKDKDKDKLIYKLYNDKQALLDDDYSILSLNSGGK CEVFENSPWVIYNNKEFKGVEIMNERSSDGKIALNKSVSNKSDSNECSSYPPISVIQPKS YFYDSAYKVKKSYLIKGDKVNLLSVSADGKWCKTRYFNIKSKAVDNIISCADLSI >gi|289777623|gb|GG745508.1| GENE 1010 1118474 - 1118848 184 124 aa, chain + ## HITS:1 COG:no KEGG:Ctu_19480 NR:ns ## KEGG: Ctu_19480 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 8 104 439 535 742 150 72.0 1e-35 MIFNWQTEQGTGYQYGLVPQFYRDLMAEMDSNRDGKVTAEEIRQALAVRDPLVKNMVNRL IVKQQSEWYGGRATGRREGFYKDLDSLEVKYCEKWQADLEFINKARYLTRTRLCNQEGKT AWCV >gi|289777623|gb|GG745508.1| GENE 1011 1118836 - 1119324 209 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVRLNGLEPSTPTMSRWCSNQLSYRRIMVRLIGLEPTTPTMSRWCSNQLSYKRIMVRSIG LEPTTPTMSRWCSNQLSYERNVVVTTGTHISGRERMWQEVNVTFLAHCMRLRNFYPFRIY FTEPQGYFFASERHDSLFSASLTLRGTVAVVLNYRPPEEKES >gi|289777623|gb|GG745508.1| GENE 1012 1119330 - 1119908 733 192 aa, chain + ## HITS:1 COG:BH3084 KEGG:ns NR:ns ## COG: BH3084 COG1611 # Protein_GI_number: 15615646 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Bacillus halodurans # 4 185 3 184 187 206 56.0 3e-53 MKSIGIFCGSSAGEHPLYLDTARLVGRTLAQQGLALVYGGGKVGLMGAVADAALEAGGVV IGVMPRGLVEREIAHRGLTELHVVEDMHERKTKMAALADGFIALPGGAGTLEEIFEQWTW AQLGIHEKPCAFLNIKGYYDPLQAMVDNMVREGFMHPRYAEMLPFATSADEIIAGFRDYT PPARKWVQQPAI >gi|289777623|gb|GG745508.1| GENE 1013 1119901 - 1119984 109 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLQRYRFELLLLLLIVCALFTLRLMFK >gi|289777623|gb|GG745508.1| GENE 1014 1120049 - 1120456 173 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAAAMGLSSVAFAADAASATPAAAASHTTVHHKKHHKAAAKPAAEQKAQAAK KHHKAAAKPAAEQKAQAAKKHHKAAAKPAVVQKAQAAKKHHKAAAKPAVAQKAQAAKKHH KAAHHAAKPAVKPAA >gi|289777623|gb|GG745508.1| GENE 1015 1120634 - 1122007 1637 457 aa, chain - ## HITS:1 COG:STM1425 KEGG:ns NR:ns ## COG: STM1425 COG0534 # Protein_GI_number: 16764773 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 457 1 457 457 725 87.0 0 MQKYFVEARQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILF GHGLLLALTPVVAQLNGSGRRDRIAQQVRQGFWLAGFVSVLIMVVLWNAGYIISSMHNID PLLAEKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIY GHFGMPELGGVGCGVATASVYWVMFASMLWWVRRGRSMRDIRCAERFSRPDVAVLLRLVQ LGLPIALALFFEVTLFAVVALLVSPLGIIDVAGHQIALNFSSLMFVLPLSLAAAVTIRVG FRLGQGSTIDAQVSARTGVGVGVCLAVFTAIFTVLMREQIALLYNDNPEVVLLASHLMLL AAIYQISDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYLLALTDMVVPRMGPAG FWCGFIIGLTSAAIMMMLRMRFLQRQPSSIILQRAAR >gi|289777623|gb|GG745508.1| GENE 1016 1122237 - 1122872 889 211 aa, chain + ## HITS:1 COG:ribC KEGG:ns NR:ns ## COG: ribC COG0307 # Protein_GI_number: 16129620 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Escherichia coli K12 # 1 205 1 205 213 365 89.0 1e-101 MFTGIVQGTAKVVSIDDKPNFRTHVVELPAHMLEGLETGASVANNGCCLTVTEINGAHIS FDLMKETLRITNLGDIQIGDEVNVERAAKFSDEIGGHLMSGHIMTTAEIVKILTSENNRQ IWFKVQDPTLMKYILYKGFIGIDGISLTVGEVTATRFCVHLIPETLQRTTLGAKKLGDRV NIEIDPQTQAVVDTVERVLAAKDAASKVNEA >gi|289777623|gb|GG745508.1| GENE 1017 1122908 - 1124056 1074 382 aa, chain - ## HITS:1 COG:cfa KEGG:ns NR:ns ## COG: cfa COG2230 # Protein_GI_number: 16129619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli K12 # 1 382 1 382 382 714 86.0 0 MSSSCIEEVSVPNDDWYRIAAELLGRAGIEINGSAPSDLRIKNPLFFKRVLQEGSLGLGE SYMDGWWDCERLDIFFHKVLRAGLEKQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHY DLGNDLFSRMLDPYMQYSCGYWKEAQTLEAAQQAKLDLICRKLELEPGMRVLDIGCGWGG LAEYMARNYQVSVVGVTISAEQQKMAQARCADLDVEIRLQDYRDLHDSFDRIVSVGMFEH VGPKNYATYFEVADRNLKPNGRFLLHTIGSKVTDHNVDPWIDKYIFPNGCLPSVRQIADA SEKHFVMEDWHNFGADYDTTLMAWYERFLASWPEIADNYSERFKRMFSYYLNACAGAFRA RDIQLWQVVFSRGIEHGLRIAR >gi|289777623|gb|GG745508.1| GENE 1018 1124350 - 1125531 1656 393 aa, chain - ## HITS:1 COG:ECs2369 KEGG:ns NR:ns ## COG: ECs2369 COG0477 # Protein_GI_number: 15831623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 3 386 2 387 403 509 74.0 1e-144 MSQPGKGFLVWLAGLSVLGFLATDMYLPAFAAMQQDLNTSAASISASLSLFLAGFALGQL FWGPLSDRYGRKPVLLSGLAIFAAGCLGMLWVHNATLMLALRFLQAIGVCAAAVTWQAMV TDYYPAQRTNRIFATIMPLVGLSPALAPLLGSWLLVHFEWQAIFATLFAITLLLMLPALR LKAAAKSVAVTQQKITFLALLRSREYSGNVLIYAACSASFFAWLTGSPFILHEMGYGPTA IGLSYIPQTIAFLVGGYGCRALLQKWSGQQMLPWLLAVFAVSVAATWLVGLQTHASLVAL MIPFCMMAVVNGGIYPIVVAQALKPFPQATGRAAALQNTLQLGLCFLTSLLVSALIATPL LTTTSVMLVSIGLAGIGYRLQQTPELTPHSSHA >gi|289777623|gb|GG745508.1| GENE 1019 1125644 - 1126555 1013 303 aa, chain + ## HITS:1 COG:STM1429 KEGG:ns NR:ns ## COG: STM1429 COG0583 # Protein_GI_number: 16764777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 303 1 303 310 545 88.0 1e-155 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAISYTVRQLEEWLAVPLFERRHRDVELTP AGVWFLQEGRSVIKKMQITRQQCQQIANGWRGQLSIAVDDIVKPARMRQMIVDFYRHFPD VELIVFQEVFNGVWDALADGRVELAIGATRSIPVGGRYAFRDMGMLSWDCVVASDHPLAK MEGPLSDDVLRNWPSLVREDTSRSLPKRTTWLLDNQKRVVVPDWESSATCLSAGLCVGMV PSHFARPWVDRGEWTALALENPFPDAACCLTWQQSDASPALNWMLDYLGDSDTLNREWLR APE >gi|289777623|gb|GG745508.1| GENE 1020 1126575 - 1127600 1250 341 aa, chain - ## HITS:1 COG:ECs2367 KEGG:ns NR:ns ## COG: ECs2367 COG1609 # Protein_GI_number: 15831621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 661 93.0 0 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAAYFAEIIESVEKSCFQKGYTLILGNAWNDPEKQRAYLSMMAQKRVDGLL VMCSEYPDSVLSMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFQGGYIAGRYLIERGHRE IGVIPGPLERNTGAGRLAGFMQAMKEAHISVPENWIVQGDFEPESGYRAMQQILSQQHRP TAVFCGGDIMAMGAICAADEMGLRVPQDISLIGYDNVRNARYFSPALTTIHQPKDSLGEA AFNMLLDRIVNKREESQSIEVHPRLVERRSVADGPFVDYRR >gi|289777623|gb|GG745508.1| GENE 1021 1127896 - 1127985 98 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTNLKFSLITTVIALGVIVAFSLTAILH >gi|289777623|gb|GG745508.1| GENE 1022 1128153 - 1129319 1324 388 aa, chain + ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 382 1 382 389 512 87.0 1e-145 MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLM TLLLSHRARRNALIFLMGIFTVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAAS VVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRMSFLATAGLGLLAMVSLWFSL PKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVW GAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPV MGAIIAGLALLLVWFSGRGQPEEAFASQ >gi|289777623|gb|GG745508.1| GENE 1023 1129381 - 1129962 457 193 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 193 1 199 201 180 44 2e-43 MSFELPALPYAKDALAPHISAETLEYHYGKHHQAYVTNLNNLIKGTAFEGKSLEEIVRTS EGGVFNNAAQVWNHTFYWNCLAPNAGGEPEGELAAAIAKSFGSFADFKAKFTDAAAKNFG AGWTWLVKNADGSLAIVSTSNAGTPLTTDAKPLLTVDVWEHAYYIDYRNARPSYLDHFWA LVNWKFVAANLAA >gi|289777623|gb|GG745508.1| GENE 1024 1130445 - 1130930 216 161 aa, chain + ## HITS:1 COG:ECs5044 KEGG:ns NR:ns ## COG: ECs5044 COG2207 # Protein_GI_number: 15834298 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 15 113 6 104 107 87 41.0 1e-17 MAKTGEVVSPKMIPVVQGIVDWIEAHILDTLPVSTIAKKSGYSHWYFQRQFAMVTGCTLA NYVSRRKMTIATIYLTQTQASIQSISQCLGYDGQAAFCRTFHRHFGMSPTRYRREAPGKE MNMQYPLTVEGKDAQVRRSAAVAADQDQRMVFGVMTRRAPT >gi|289777623|gb|GG745508.1| GENE 1025 1130885 - 1131757 200 290 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 108 283 10 174 175 81 32 1e-13 MARLNKIAISLCALLFTSISFTPLAQASGHTHASASPKALPAKSGSERKKKATSQKSKTT AKTTSKKSSSTRLPSRTTAASQTALHRQAAGATKKCVLRKGYKKQCAKTVAASAEPTLAL NSVKSKCVVRKGYKKRCKPEASDANLTIADAHKVRVQKAQSTAMNKLMGQLGKPYRWGGT SPRTGFDCSGLVYYAYKDLVKIHIPRTANEMYHLRDARPVDRDELQSGDLVFFRTRGRGT ADHVGVYVGNGKFIQSPRTGRDIQITSLSEDYWVRHYVGARRVMTPKTIR >gi|289777623|gb|GG745508.1| GENE 1026 1132098 - 1132445 484 115 aa, chain + ## HITS:1 COG:STM1433 KEGG:ns NR:ns ## COG: STM1433 COG0278 # Protein_GI_number: 16764781 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 220 95.0 6e-58 MSSTLEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRA ELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYHTDEPKAE >gi|289777623|gb|GG745508.1| GENE 1027 1132492 - 1133139 901 215 aa, chain - ## HITS:1 COG:STM1434 KEGG:ns NR:ns ## COG: STM1434 COG0847 # Protein_GI_number: 16764782 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 1 213 1 213 215 394 89.0 1e-110 MSENAQLNGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDETLHF HVEPFEGANLQPEALAFNGINPHDPERGAVSEYDALHAIFKMVRKGMKESDCSRAIMVAH NATFDHSFTMTAAERAGLKRNPFHPFVTFDTAALSGLALGQTVLSKACIAAGMAFDGAQA HSALYDTEQTAQLFCEIVNRWKRLGGWPLPVATPE >gi|289777623|gb|GG745508.1| GENE 1028 1133277 - 1133684 216 135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 87 38 2e-15 MRLLHTMLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGEESETAVIELTYN WGVDSYELGTAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYK IELIEEKDAGKGLGN >gi|289777623|gb|GG745508.1| GENE 1029 1133763 - 1134860 1402 365 aa, chain - ## HITS:1 COG:nemA KEGG:ns NR:ns ## COG: nemA COG1902 # Protein_GI_number: 16129608 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 1 365 1 365 365 619 86.0 1e-177 MSEAKLFSPLKVGAVTVPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASSGLIITEAT QISAQAKGYAGAPGLHSPEQIAAWQKITAGVHAENGRIAVQLWHTGRISHSSLQPGGAAP VAPSALSAGTRTSLRDENGHAIRADTSMPRALETEEIPGIVDDFRQAVGNARDAGFDLVE LHSAHGYLLHQFLSPSANQRTDQYGGSVENRARLVLEVVDAVSKEWSADRIGIRVSPIGS FQNVDNGPNEEEDALYLISELAKRGIAYLHMSEPDWAGGKPYSEAFRQKVRDRFPGVIIG AGAYTVEKANDLINKGLIDAVAFGRDYIANPDLVARLQKKAALNPQRPETFYGGGAEGYT DYPTL >gi|289777623|gb|GG745508.1| GENE 1030 1134914 - 1135513 594 199 aa, chain - ## HITS:1 COG:ydhM KEGG:ns NR:ns ## COG: ydhM COG1309 # Protein_GI_number: 16129607 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 199 1 199 199 297 74.0 7e-81 MNRHSECDTREHILVTGEQLCMHRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVALL EHHYTGYLQRLVDHFDHGDGNYRDRLLAYYQHTLNQFCQQGIISGCLTVKLSAEVCDLSE DMRTAMDHGASQIIALLGDALEKGRQEGSLAFDGEAMTLSQVLYSLWLGANLQAKITRSA RPLESALAHAKQIIAAPAV >gi|289777623|gb|GG745508.1| GENE 1031 1135656 - 1135895 224 79 aa, chain + ## HITS:1 COG:ECs2358 KEGG:ns NR:ns ## COG: ECs2358 COG3313 # Protein_GI_number: 15831611 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli O157:H7 # 1 79 47 125 125 133 81.0 9e-32 MAEQLEFFPVQSPCRGICQTDERGYCRGCFRSREERFNWQTMSDAQKQEVLRLCRQRLLR KIRANKPEPAEEPQQPSLF >gi|289777623|gb|GG745508.1| GENE 1032 1135944 - 1136840 1255 298 aa, chain + ## HITS:1 COG:ydhF KEGG:ns NR:ns ## COG: ydhF COG4989 # Protein_GI_number: 16129605 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Escherichia coli K12 # 1 298 1 298 298 541 88.0 1e-154 MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQC EAAFGEALKLAPHLRNRMEIVSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATD HLDLLLIHRPDPLMNADEVAEAFLALHHSGKVRHFGVSNFTPAQFTLLQSRLPFTLATNQ VEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQPLRDELAQVAHELNAD SIEQVVYAWILRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP >gi|289777623|gb|GG745508.1| GENE 1033 1136994 - 1137431 556 145 aa, chain + ## HITS:1 COG:ECs2355 KEGG:ns NR:ns ## COG: ECs2355 COG2032 # Protein_GI_number: 15831609 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Escherichia coli O157:H7 # 1 145 29 173 173 208 77.0 3e-54 MTPQGVGQSIGSVKITETDRGLEFAPELRALPPGKHGFHIHAEGSCQPAMKEGKAVAAGA AGGHYDPQHTGKHEGPLGTGHLGDLPLLVVNDAGVADQPIIAPRLKTLDEVKGKALMVHV GGDNMADNPQPLGGGGERFACGVIK >gi|289777623|gb|GG745508.1| GENE 1034 1137424 - 1139358 1920 644 aa, chain - ## HITS:1 COG:STM1441 KEGG:ns NR:ns ## COG: STM1441 COG1289 # Protein_GI_number: 16764789 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 640 31 670 679 968 77.0 0 MCLALSIAYALDLDEPYWAMTSAAVVSFPTVGGVISKSFGRIAGSLLGACAALLLAGHTL NDPWLFLFSISGWLALCTWACALFTNNVAYAFQLAGYTCAIIAFPVINISDSYELWVIAQ SRVCEVIVGILCGGLMMMILPSTSDGSNLLTALKTMHARLLEHASLLWVPETTDAIRTAH ESVIGQILTMNLLRIQAFWSHYRFRRQNPLLNYLLHQQLRMTSVISSLRRMLLNWPDAPA NTRQVLESLLAELAAPHADSYHVARILAPLAPPPEADYRHIAFWARLRYFCRIYLESSRW IRRVENASAIAEFNVPSAPALARHTDQAEALLNGIRTFCALVAIGAWGISTQWTSCAAAL TLASICCVLYSVSASPFRSLTLLMQTLVLLSLFSFVVKFGLMVQITDLWQFLLFLFPLLT TMQLLKLQWPKYAGLWGQLIVFMGSFISVTNPPVYDYAAFFNDNLSKIVGVGFAWLAFAV LSRGSDARKGRRHIRALRRHFVDQLSRHPQHSEHEFESLVYHHVSQLSQSKDALARRWLL RWGVVLLNCSHVVWQLREWETRSDPLAQVRDLCINLLRDVMSERGVQQRPLASTLQELLR ICDVLNHHHQPAARELAAAIWRLYCALSQLEQAPIAGTIGEKTT >gi|289777623|gb|GG745508.1| GENE 1035 1139448 - 1140344 1147 298 aa, chain - ## HITS:1 COG:ydhJ KEGG:ns NR:ns ## COG: ydhJ COG1566 # Protein_GI_number: 16129602 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 296 17 298 299 378 63.0 1e-105 MKKLKYLSTLLVAAIALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTD NQRVNAGDVLFTIDDTPYRIAVLNAQAQQAKAQAEVAKAQAEQTKAASEARRRRNLSQNA ISAEDLENVNTALNTAITNLAAARAGLGVSEAMLKHAQWQLSQTTVKAPVDGWVTNLSTR VGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLHGHVASIGR AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFNELPADVTLVSGTTCTVSIGGQ >gi|289777623|gb|GG745508.1| GENE 1036 1140355 - 1140591 323 78 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2321 NR:ns ## KEGG: Kvar_2321 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 78 1 78 78 117 100.0 2e-25 MKLSLNTSGLPLQDLVFGASVYFPPLFKAVLLGFFIWLFLHRQLRDWMYAGDIWHPLLMD LSLFALSVCLALVLLIAW >gi|289777623|gb|GG745508.1| GENE 1037 1140764 - 1141204 382 146 aa, chain + ## HITS:1 COG:ECs2351 KEGG:ns NR:ns ## COG: ECs2351 COG1846 # Protein_GI_number: 15831605 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 145 1 145 146 212 86.0 2e-55 MKLESPLGSDLARLVRVWRALIDHRLKPLELTQTHWVTLHNIHQLPPEQSQIQLAKAIGI EQPSLVRTLDQLEEKGLISRQTCSSDRRAKRIKLTEKAEPLINEMEEVIGKTRDEILSGV SKQEVETLLHLIRKLEQNILDLQAKD >gi|289777623|gb|GG745508.1| GENE 1038 1141240 - 1142601 1066 453 aa, chain - ## HITS:1 COG:ycdT_2 KEGG:ns NR:ns ## COG: ycdT_2 COG2199 # Protein_GI_number: 16128989 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 254 447 2 192 202 138 36.0 2e-32 MLKHVNHVAKRFIIYVFICLLAGFGTAGVTAFFHTSFSTTSSILFPLLTSFLMVFHITIA CFMGMKYWSNKRRLYLTPVAFGFACSALLMLGTLSSYPDWLTCSTTPVINQNDAVIYYFF RNIMMAVLFMSSIVLYYFRQRIMHSLKAHIITFAACIVFTLTIIFLSWVYSSHSPWLSVN FIDDLSHTFTPLWQSIIGWLLMAIWFITLILLISLSKLRNIFWFSGAFFCSAYLYTLFQL VSTAGDLDQTWYQARFFETLCTLFLILVLLVDVFMLYRESNHKYVNSYQNSIRDPLTRLY NRSFFYDTLNQQLAKVNPQHPLSVIISDLDHFKRINDNYGHVAGDKVIQFAASVLENHSR VDDAAARIGGEEFALLLVNTAEKDALAIAERIRLAVNAEQNHLPERMTISMGLYTTRDRS VNAETCVERADAAMYEAKNSGRNRVVVWRHPGD >gi|289777623|gb|GG745508.1| GENE 1039 1142822 - 1143289 424 155 aa, chain - ## HITS:1 COG:slyB KEGG:ns NR:ns ## COG: slyB COG3133 # Protein_GI_number: 16129599 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 155 1 155 155 174 81.0 5e-44 MILRVLAVSMIGFTLAGCVSSSGLSGDVYSASEAKQVQSVTYGTIVHTRAVQIQSGDDSN AIGAIGGAVLGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGVQGAMNKTQGVELEIRKDD GNTILVVQKQGSTPFSVGQRVAIAGSGSQVTVSPR >gi|289777623|gb|GG745508.1| GENE 1040 1143558 - 1144682 1249 374 aa, chain + ## HITS:1 COG:STM1446 KEGG:ns NR:ns ## COG: STM1446 COG2377 # Protein_GI_number: 16764794 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Salmonella typhimurium LT2 # 1 369 1 369 373 608 81.0 1e-174 MRSGRFIGVMSGTSLDGIDVVLAAINENIVAQQASLTWPIPHPIKEEILAICQGQSLTLS QLGRLDTRLGRLFADAVLALMRQENLKPTDVIAIGCHGQTVWHEPQGDAPHTLQIGDNNQ IAAHTGVTVVGDFRRRDMALGGQGAPLVPAFHHALLAHPIERRMVLNIGGIANVSLLVPG QPVRGYDTGPGNMLLDAWIWRQQGKPYDKDAQWASEGKVLLPLLQDMLSDPWFALPAPKS TGREYFNYGWLEKHLARYSGLRGQDVQATLAELTAVTISEQVLLSGGCERLLVCGGGARN PLLMARLAALLPGTEVSTTDEAGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASEATV LGAIFPANPPQNRS >gi|289777623|gb|GG745508.1| GENE 1041 1144730 - 1145098 435 122 aa, chain + ## HITS:1 COG:STM1447 KEGG:ns NR:ns ## COG: STM1447 COG3895 # Protein_GI_number: 16764795 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Salmonella typhimurium LT2 # 16 122 3 109 109 169 71.0 2e-42 MGGVPSVTGKVEGKRMKKILIAVVPFMLAGCSYYNQFVERMQTDTLEYQCDQKPLTVHRN NTRQQVSFIYDNQQLNLAEGLSASGARYTDGVYVFWSKGDTATVYKRDRIILDNCQLQTA KR >gi|289777623|gb|GG745508.1| GENE 1042 1145150 - 1145812 672 220 aa, chain + ## HITS:1 COG:STM1448 KEGG:ns NR:ns ## COG: STM1448 COG0259 # Protein_GI_number: 16764796 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Salmonella typhimurium LT2 # 3 220 1 218 218 405 92.0 1e-113 MAMSDNDELQQIAHLRREYTRGGLRRHDLPAEPLPLFERWLRQACDAKLADPTAMVVATV DERGQPYQRIVLLKHYDEKGLVFYTNLGSRKAHQIEKNPQVSLLFPWHMLERQVMVIGKA ERLSTLEVVKYFHSRPRDSQIGAWVSQQSSRISARGILESKFLELKQKFQQGEVPLPSFW GGFRISVEQMEFWQGGEHRLHDRFLYQRDNGAWKIDRLAP >gi|289777623|gb|GG745508.1| GENE 1043 1145937 - 1147211 822 424 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 421 7 414 418 321 42 8e-86 MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKR FQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNS AIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQG YDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPRAQ YVLAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLL QALVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNYCL VCWK >gi|289777623|gb|GG745508.1| GENE 1044 1147272 - 1148132 1210 286 aa, chain + ## HITS:1 COG:ECs2345 KEGG:ns NR:ns ## COG: ECs2345 COG2240 # Protein_GI_number: 15831599 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli O157:H7 # 1 286 2 287 287 523 90.0 1e-148 MKNILAIQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLT EIVQGIADIDKLQTCDAVLSGYLGSAEQGEHILGIVRQVKAANPAAKYFCDPVMGHPEKG CIVAPGVAEFHVRYALPASDIIAPNLVELEILCGHPVASVSEAVAAARELIAQGPEVVLV KHLSRAGLSMDRFEMLLVTAEEAWHISRPLVDFGLRQPVGVGDVTSGLLLVKLLQGASLR DALEHVTAAVYEIMLTTKNMQEYELQVVAAQDRIAVPEHCFSATRL >gi|289777623|gb|GG745508.1| GENE 1045 1148175 - 1148780 885 201 aa, chain - ## HITS:1 COG:STM1451 KEGG:ns NR:ns ## COG: STM1451 COG0625 # Protein_GI_number: 16764799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 200 1 200 201 305 79.0 3e-83 MKLFYKPGACSLASHIALRESGLDFTLQSVDLAKKRLENGDDYLLINPKGQVPALLLDDD ILLTEGVAIMQYIADQVPDRHLLAPVGSIARYQTLEWLNYVATELHKGFTPLFRPDTPED YKPVARALLEKKLQYVDTSLEDKQWLTGHRFTIADGYLFTVLRWGYGIKLDMAAYGHIDS WMAQVAARPAVAAALAAEGLK >gi|289777623|gb|GG745508.1| GENE 1046 1148891 - 1150363 2105 490 aa, chain - ## HITS:1 COG:STM1452 KEGG:ns NR:ns ## COG: STM1452 COG3104 # Protein_GI_number: 16764800 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 488 12 499 501 785 86.0 0 MSLNAFKQPRAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVY GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAAIVYMGMATIAVGNGLFKA NPSSLLSTCYDKNDPRLDGAFTMYYMSINIGSFFSMLATPWLAARFGWSVAFALSVVGMV ITIINFAFCQKWVKQYGSKPDFAPVHMGKLLATIAGVVVLVAIATWLLHNQGIARMVLGV VALGIVVIFAKETIGLKGAARRKMIVAFLLMVEAIVFFVLYSQMPTSLNFFAIRNVEHSI LGIAFEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGA KFASDAGIVSVNWLILSYALQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA IIAGKIANLMAVPENVTDPLVSLEVYGHVFLQIGIVTAVIAALMLLTAPKLNRMTQDDSA DLKARETAAA >gi|289777623|gb|GG745508.1| GENE 1047 1150998 - 1151633 777 211 aa, chain - ## HITS:1 COG:nth KEGG:ns NR:ns ## COG: nth COG0177 # Protein_GI_number: 16129591 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Escherichia coli K12 # 1 209 1 209 211 410 95.0 1e-115 MNKAKRLAILTRLRENDPHPTTELHFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT PAAMLALGVDGVKSYIKTIGLFNSKAENVIKTCRILLEQHNGEVPEDRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI LHGRYTCIARKPRCGSCLIEDLCEFKEKVYA >gi|289777623|gb|GG745508.1| GENE 1048 1151635 - 1152333 974 232 aa, chain - ## HITS:1 COG:ECs2341 KEGG:ns NR:ns ## COG: ECs2341 COG4660 # Protein_GI_number: 15831595 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Escherichia coli O157:H7 # 1 230 1 229 231 350 89.0 2e-96 MSEVKDVIVQGLWKNNSALVQLLGMCPLLAVTSTATNALGLGLATTLVLTLTNLTISSLR RWTPAEIRIPIYVMIIASVVSVVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA KKGPALSALDGFSIGMGATCAMFVLGSLREILGNGTLFDGADSLLGSWAKVLRIEVFHTD TPFLLAMLPPGAFIGLGMMLAVKYLIDERSKQRKAQAARAVSVAPSDVTGKA >gi|289777623|gb|GG745508.1| GENE 1049 1152336 - 1152956 590 206 aa, chain - ## HITS:1 COG:ydgP KEGG:ns NR:ns ## COG: ydgP COG4659 # Protein_GI_number: 16129589 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Escherichia coli K12 # 1 206 1 206 206 343 83.0 9e-95 MLKTMRKHGVTLALFAAGSTGLTAAINELTKSTIDQQAALQQKALFDQVLPADRYNNDLL KSCYLVSAPALGKGQHKVWIAKNNDQPIGAVMEATAPDGYSGAIQLLVAADFSGTVLGTR VTEHHETPGLGDKIELRLSDWITHFAGKVIHGQGDSHWAVKKDGGDFDQFTGATITPRAV VNAVKRAGLYAQTLPAQLPEFTACGE >gi|289777623|gb|GG745508.1| GENE 1050 1152967 - 1154019 1473 350 aa, chain - ## HITS:1 COG:ECs2339 KEGG:ns NR:ns ## COG: ECs2339 COG4658 # Protein_GI_number: 15831593 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Escherichia coli O157:H7 # 1 350 1 350 352 551 84.0 1e-157 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIVVQTWFFGWGTVLQIVLAALTAWATEAA ILKLRKQHIVATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTAFAVVIAKQLYGGLGHNP FNPAMIGYVVLLISFPVQMTSWLPSYEIAAQVPAFSDVLQMIFTGHTAAGGDMASLRLGI DGISQATPLDTFKTSLHAGHSVQQVLQLPVYGGVLAGLGWQWVNIAWLAGGLFLLWQKAI RWHIPVSFLLSLGLCATLGWLFSPQSLASPQMHLFSGATMLGAFFILTDPVTASTTNRGR LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR >gi|289777623|gb|GG745508.1| GENE 1051 1154660 - 1156321 1837 553 aa, chain - ## HITS:1 COG:ydgN KEGG:ns NR:ns ## COG: ydgN COG4656 # Protein_GI_number: 16129587 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Escherichia coli K12 # 1 552 1 552 740 909 86.0 0 MFKLFSAFRKDKVWDFNGGIHPPEMKTQSNGTPLRQVSLPQRLIIPLKQHIGAEGELCVK VGDRVLRGQPLTRGWGRMLPVHAPTSGTVTAIAPHTTAHPSGLAEMSVIIDADGEDRWIE RDGWSDYQVRTREALIERIHQFGVAGLGGAGFPTGSKLRGGGDKIKTLIINAAECEPYIT ADDRLMQDCAAQIVDGIRILAHILQPDEVLIGIEENKPQAISMLRAVLCDAHGISLRVIP TKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNVGTAYAIKRAVIDGEPLTERVVTLT GEAVSRPGNVWARLGTPVRHLLNDAGFCASAEPMVIMGGPLMGFTLPGLDVPVVKITNCL LAPSASEMGEPQEEKGCIRCSACADACPADLLPQQLYWFSKGQQHDKATAHNLADCIECG ACAWVCPSNIPLVQYFRQEKAEISAIRQEEQRAAEAKARFEARQARLEREKAARAERHKK AAVQPAAKDQDAINAALARVRDKQRDAAQPIVIQSGAKPDNSEAIAAREARKAEARARKA QQQAASVEAPVAS >gi|289777623|gb|GG745508.1| GENE 1052 1156314 - 1156892 571 192 aa, chain - ## HITS:1 COG:STM1458 KEGG:ns NR:ns ## COG: STM1458 COG2878 # Protein_GI_number: 16764806 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Salmonella typhimurium LT2 # 1 191 1 191 192 313 83.0 1e-85 MSAVWIAVIAISLLGLIFGLILGYASRRFAVQDDPVVEKIDELLPQSQCGQCGYPGCRPY AEAVGAQGEKINRCAPGGEAVMLKIAALLNVDPQPVDGDEQEAEPVRMLAVIDEPNCIGC TKCIQACPVDAIVGATRAMHTVMNDLCTGCNLCVAPCPTQCISLVPVATTPETWKWDLHA IPVRNIPVEQHV >gi|289777623|gb|GG745508.1| GENE 1053 1156892 - 1157473 850 193 aa, chain - ## HITS:1 COG:ECs2336 KEGG:ns NR:ns ## COG: ECs2336 COG4657 # Protein_GI_number: 15831590 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 279 96.0 2e-75 MADYLLLFIGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID TWILIPLNLVYLRTLAFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVA LLNINLGHNFLQSALYGFAAAVGFSLVMVLFAAIRERLVVADVPAPFRGNAIALITAGLM SLAFMGFSGLVKL >gi|289777623|gb|GG745508.1| GENE 1054 1157552 - 1157992 369 146 aa, chain - ## HITS:1 COG:no KEGG:KPN_01963 NR:ns ## KEGG: KPN_01963 # Name: ydgK # Def: putative oxidoreductase # Organism: K.pneumoniae # Pathway: not_defined # 1 146 1 146 146 157 93.0 1e-37 MTSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSTQTYALLRAMSTGHLALWLA SLLFAVAMWYYTLWLTIAFFKRRSLVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLL FPLLAAALLAPYFRRSQRVKRTFVHP >gi|289777623|gb|GG745508.1| GENE 1055 1158068 - 1158283 210 71 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2340 NR:ns ## KEGG: Kvar_2340 # Name: not_defined # Def: hemolysin expression modulating family protein # Organism: K.variicola # Pathway: not_defined # 1 71 1 71 71 136 100.0 3e-31 MTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTEEIVNMYRAADHRRAELVSGGKLFDVG QVPKSVWRFVQ >gi|289777623|gb|GG745508.1| GENE 1056 1158501 - 1159871 1616 456 aa, chain - ## HITS:1 COG:CAC0385 KEGG:ns NR:ns ## COG: CAC0385 COG2723 # Protein_GI_number: 15893676 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 4 454 3 467 469 489 50.0 1e-138 MAAFPHNFLWGAATAAYQVEGGHDADGKGPSIWDIYSHLPGTTFEGTTGDVAVDHYHRFR EDVALMAEMGLQSYRFSISWPRLLPAGRGEVNEAGVQFYSDLIDELLAHNIEPMITLYHW DLPQALQDEGGWEARTTAEAFAEYARLCYARFGSRVKLWATFNETIVFIGHGYINGLHPP AVRDPARAIQACHHVFIAHALAVKAFREMNVAGEIGFVNVLQPHTPLTDSEADKKATELA DAIHTHWLYDPVLKGTYPAALLAQTQALWGVPRFAPDDDTLLRENRCDFIGLNYYRRETV SAQPPNIPTGGEPGVEGLFYFVRNPQSTYTEWGWEIWPQGLTDGIMMIKERYGDIPIYIT ENGLGAKDPIIAGEVVDDPRIDYLSSHIGALEKALALGADVRGYYPWSFIDLLSWLNGYQ KQYGFVYVDHQQNLARKRKKSFYWYKSVIASHGEQR >gi|289777623|gb|GG745508.1| GENE 1057 1160315 - 1161355 935 346 aa, chain + ## HITS:1 COG:STM1462 KEGG:ns NR:ns ## COG: STM1462 COG0673 # Protein_GI_number: 16764810 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 345 26 370 371 597 82.0 1e-170 MSDAIRVGLIGYGYASKTFHAPLIGGTPGMALTRVSSSEAGKVHADWPGVRVVSAAKDLL NDPDIDLVVIATPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELESLAKHCGRVLSV FHNRRWDSDFLTVRALINEGQLGEVCYFESHFDRFRPQVRQRWREQGGPGSGIWYDLGPH LLDQAVVLFGLPVSITVDLAQLRPGAQSTDYFHAVLAYPQRRVVLHGTLLAAAESARFIV HGSRASYIKFGLDPQEERLKNGERLPQEDWGYDMRDGTLTRAEGDERSEETWLTLPGNYP AYYAAIRDALNGEGENPVPASEAIQIMTLIELGIESARHRATLSLV >gi|289777623|gb|GG745508.1| GENE 1058 1161391 - 1162392 1165 333 aa, chain - ## HITS:1 COG:STM1463 KEGG:ns NR:ns ## COG: STM1463 COG1816 # Protein_GI_number: 16764811 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Salmonella typhimurium LT2 # 1 333 1 333 333 554 84.0 1e-158 MIDSSLPLTDIHRHLDGNIRAQTILDLGREFNIALPASTLDTLRPHVQVTSLEPDLVSFL AKLDWGVKVLASLEACRRVAYENVEDAARNGLHYVELRFSPRYMAMTHQLPVDGVVEAVI AGVREGSRDFQVDARLIGILSRTFGEAACQEELAALLAHREGITALDLAGDELGFPGTLF LNHFNQARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDPALMDYLAEHQI GIESCLTSNVQTSTVASLAQHPLKQFLEHGVLASLNTDDPAVQGVDIIHEYTVAAPAAGL SRELIRQAQINGLTQAFLSEQEKAALIQRVAKG >gi|289777623|gb|GG745508.1| GENE 1059 1162550 - 1163578 744 342 aa, chain - ## HITS:1 COG:SMa1959 KEGG:ns NR:ns ## COG: SMa1959 COG0477 # Protein_GI_number: 16263526 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 2 337 124 461 469 224 50.0 1e-58 MIGSVVTATQAGYAIGLLFLVPLGDGLNRKYVVLTQLLLSVAALVVAGLSPNIAILLGAM LIVGLMAVVVQLMVAWVAILATPQKRGQAVGTLTSGIVSGILLSRFISGAIADIAGWRAV YLTAACLMLLIAGVVWKVMPSPPPQPQKPTYLSLLKSVFQLYLTEPQLRKRGILALLIFA AFSMLWTTMVMPLTALSLSHTQTGMFGLAGIAGVLAASRAGRWADQGWAQRTTGLALALL ALSWLPIACAETSLLWLIAGVIALDFAVQAVHVTNQSLIIAARPAAASRLVGAYMCFYSL GSAAGAIVATQLYSHWGWQAVCLAGAAVSACAFLVWSGSRQS >gi|289777623|gb|GG745508.1| GENE 1060 1163893 - 1164357 408 154 aa, chain + ## HITS:1 COG:PA1607 KEGG:ns NR:ns ## COG: PA1607 COG1733 # Protein_GI_number: 15596804 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 146 1 145 146 145 47.0 3e-35 MAKQESLRTSECPVARTLESIGERWCLMIIREAFDDVRRFSEFQKNLGLAKNILASRLKH LVDIGIFAILPASDGSAYKEYVLTEKGRSVFPIVVAMRQWGERYMFDKGETYSVLLDNEH GQPLQYLDVRSAQGDKLQPGDCHRRRVVSDISGE >gi|289777623|gb|GG745508.1| GENE 1061 1164600 - 1164785 159 61 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2347 NR:ns ## KEGG: Kvar_2347 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 61 1 61 61 80 100.0 3e-14 MESVIHNNIEGFLLLLLSMWPILIVVFIGVAISFYTMLLRKTALACLLFAVAIGAAGWSL A >gi|289777623|gb|GG745508.1| GENE 1062 1164795 - 1165163 239 122 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2348 NR:ns ## KEGG: Kvar_2348 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 122 1 122 122 166 99.0 2e-40 MKKIGLTLLLLASLAVPAFAADCQPNGIGGSFCINDDGTTTDTVPNEVNGMDTYSNNGGY TSSLPDQSGADEALEGSTMSTQQDTVASSGQGDSALAGRDWHAPSNLNDGAATSSMSLLD KP >gi|289777623|gb|GG745508.1| GENE 1063 1165426 - 1165953 506 175 aa, chain + ## HITS:1 COG:STM1639 KEGG:ns NR:ns ## COG: STM1639 COG3038 # Protein_GI_number: 16764983 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Salmonella typhimurium LT2 # 1 175 1 175 176 259 78.0 1e-69 MRDKYSGLQIGIHWLVFLLVVVAYAAMELRGFFPRSDRPLINMIHVSCGITICALMVARL LVRLKSPAPPIVPKPSPMMTGFAHLGHLVIYLLFIALPLIGMVMMYWRGNPWYAFGLTMP YAPQSDFERVDTLKAIHEWLANAGYFVIGLHALAALVHHYWWKDNTLLRMMPRKR >gi|289777623|gb|GG745508.1| GENE 1064 1166060 - 1166335 248 91 aa, chain + ## HITS:1 COG:STM1628 KEGG:ns NR:ns ## COG: STM1628 COG1937 # Protein_GI_number: 16764972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 142 86.0 2e-34 MPHSPEDKKRALSRVRRIRGQVEALERALESGEPCMTILQQIASIRGAANGLMGEMVEIH LQDELVSGETTPDQRAARMAEVGHLLRSYLK >gi|289777623|gb|GG745508.1| GENE 1065 1166360 - 1167478 1551 372 aa, chain + ## HITS:1 COG:STM1627 KEGG:ns NR:ns ## COG: STM1627 COG1062 # Protein_GI_number: 16764971 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Salmonella typhimurium LT2 # 1 371 1 371 372 697 96.0 0 MKSRAAVAFGPGQPLKIVEIDVAPPKKGEVLVKITHTGVCHTDAFTLSGDDPEGVFPAVL GHEGGGIVVEVGEGVTSLKPGDHVIPLYTAECGECKFCKSGKTNLCQAVRATQGKGLMPD GTTRFSYNGEPIYHYMGTSTFSEYTVCAEISLAKVNPQAPLDKVCLLGCGVTTGIGAVHN TAKVKPGDSVAVFGLGGIGLAVIQGAVQAQAGRILAVDTNPDKFTLAKEMGATDFINPND YDKPIQDVIVELTDGGVDFSFECIGNVNVMRAALECCHKGWGESVIIGVAGAGQEIKTRP FQLVTGRVWRGSAFGGVKGRSQLPGMVEDAMAGKIRLDPFITHRLPLEQINEAFDLMHEG KSIRTVIHFGDQ >gi|289777623|gb|GG745508.1| GENE 1066 1167548 - 1169920 2860 790 aa, chain - ## HITS:1 COG:AGl2936 KEGG:ns NR:ns ## COG: AGl2936 COG4993 # Protein_GI_number: 15891579 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 788 15 809 809 852 55.0 0 MATGNAPRGFPRILQWLLAGLMLIIGLAVGILGAKLALVGGTLYFALMGVVMVIAAVLIF RNRRGGILLYAVAFIASVIWAISDAGWSYWPLFSRLFALGVLAFLAALVWPFLASPPAKK GPAYGVAAVLAVALAVSFGWMFKSEPLVSATEAVPVKPVAPGEQQKNWAHWGNTTHGDRF AALDQINKQNVNQLQVAWVAHTGDIPQSNGSGAEDQNTPLQIGDTLYVCTPYSKVLALDV DSGKEKWRYDSKSSSPNWQRCRGLGYYEESQAQTAPASGTQPAACSRRLFLPTIDARLIA IDADTGKLCESFGDGGIVDLSVGMGEVKAGYYQQTSTPLVAGNVVVVGGRVADNYSTGEP PGVVRAFDVHTGKLAWAWDPGNPALTGVPPEGQTYTRGTPNVWSAMSYDAKLNLIYLPTG NATPDFFGGERTALDDKYSSSIVAVDATTGQVRWHFQTTHHDLWDFDLPSQPLLYDLPDG KGGTTPVLVQTSKQGMIFMLNRETGEPVAKVEERPVPAGNVKGERYSPTQPYSVGMPMIG NQTLTESDMWGATPIDLLLCRIQFKEMRHQGVFTPPGEDRSLQFPGSLGGMNWGSVSVDP NNSLMFVNDMRLGLANYMVPRAKVAKDASGIEMGIVPMEGTPFGAMRERFLSPLGIPCQK PPFGTMSAVDLKTGKLVWQVPVGTVEDTGPLGIRMHMPIPIGMPTLGASLSTQSGLLFFA GTQDFYLRAFDTANGKEIWKSRLPVGSQSGPMTYVSPKTGKQYIIINAGGARQSPDRGDY IIAYALPDHH >gi|289777623|gb|GG745508.1| GENE 1067 1170217 - 1171140 909 307 aa, chain - ## HITS:1 COG:ydcI KEGG:ns NR:ns ## COG: ydcI COG0583 # Protein_GI_number: 16129381 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 306 48 353 354 507 83.0 1e-143 MEKNGLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGTRLFER GRLGAQLTLVGEQFLTHAVKVLDALNSAGQALNRKEGLNNDIVRIGALPTAALGILPTVI GQFHKQQKDITLQVATMNNTMLLAGLKSGEIDIGIGRMSDPDLMSGLNYELLFLESLKLV VRPGHPLLQETVTLSRVMEWPVVVSPKGTVPRQNAETLLQSQGCKMPAGCIETLSASLSR QLTVDFDYVWFVPSGAVKDDLRRGVLSALPIATQGAGEPIGILTRVDATLTPGTQTLLSA IRKSMPA >gi|289777623|gb|GG745508.1| GENE 1068 1171316 - 1171936 778 206 aa, chain - ## HITS:1 COG:RSc1442 KEGG:ns NR:ns ## COG: RSc1442 COG3485 # Protein_GI_number: 17546161 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Ralstonia solanacearum # 7 206 14 216 216 264 66.0 1e-70 MKEYLPETASQTAGPYVHIGLAPDAAGFHIFEKNFGPVLTTADTTGERITIEGRVIDGSG TPVRDVLLEIWQANAAGRYNHPDDRQQQKAVDPGFRGWGRTCSDFTSGVWRFDTIKPGPV VGRDGRLMAPHVNLWVVARGINIGLNTRMYFADEHEANASDPVLNLIEWEVRRKTLIAER EVRGSEVVYRFDIYLQGENETVFFDI >gi|289777623|gb|GG745508.1| GENE 1069 1171933 - 1172673 883 246 aa, chain - ## HITS:1 COG:RSc1441 KEGG:ns NR:ns ## COG: RSc1441 COG3485 # Protein_GI_number: 17546160 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Ralstonia solanacearum # 9 244 10 245 246 376 75.0 1e-104 MNDKWSPREVIHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSRDDLGP LDNDLILNYAKEGLPIGERIIVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAP IDPNFGGCGRVLTDENGYYCFRTIKPGPYPWRNQASDWRPAHIHFSLSGEAWAQRLITQM YFEGDPLIKQCPIVRTINNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR TQGAAR >gi|289777623|gb|GG745508.1| GENE 1070 1172913 - 1174256 1523 447 aa, chain + ## HITS:1 COG:ydcJ KEGG:ns NR:ns ## COG: ydcJ COG5383 # Protein_GI_number: 16129382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 447 1 447 447 768 85.0 0 MANTITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADEL ARLNVERHGAIRVGTAEELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALA RNPFRVFTSLLRLELIENRALRERAEAILARRKIFTPRCLALIAQYEAEGEFTSADAREF VQEALETFRWHRHATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRAQALMP ECGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHKGTHSARFGEIEQRGIALTP KGRALYDRLLQAAGTGKDNLSHQLHLQEVFREFPDSEFLLRQQGLAWFRYRLTPAGEAHR QAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSNLGNETQARSHGNASREAFET ALGCPVEDEFALYRQAEERSKRRCGLL >gi|289777623|gb|GG745508.1| GENE 1071 1174298 - 1175803 1677 501 aa, chain + ## HITS:1 COG:STM1623 KEGG:ns NR:ns ## COG: STM1623 COG2272 # Protein_GI_number: 16764967 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Salmonella typhimurium LT2 # 1 501 1 502 502 806 77.0 0 MQHPSKPLAKTRQGTVSGSTEQGIHIWRGIPYAAPPVGQLRWRAPQPPARWQGVRQADAF SAASWQDIDYCRELGGGDPGAFSEDCLYLNIWAPATAAQPLPVMVWLHGGGFTIGAGSLP PYDGKALASRDVVVVTVNYRLGHLGFFAHPALEEEAGERLYNFALLDQIAALQWVQENIH AFGGDAANVTLFGESAGARSVLSLMASPKAKGLFHKAIIQSGYTLPDLPREKALEKGRLL AEHFALPRASAEELRAIPAEAFWSLTAPLNTGPAPIVGDAVLPQPMLETFFAGRQHPMPV MIGSNSDEASVMAVFGVDIAGQIQKLRRERRLGLGLIKLLYPGVKGDEALGREVCRDMAF TTLGYVVMQAQQRVGQPCWRYWFDYVAEAEHDTYPHGAWHGNEVPYVFDNLRLTDPVCQY ASEADLAFAAQVADYWAQFARVASGDQALAGAVRWPACLRGRDRLLRIGLHKRAGFKVEN RFMRARLALFRRVMKHHVTLE >gi|289777623|gb|GG745508.1| GENE 1072 1175858 - 1176946 1324 362 aa, chain - ## HITS:1 COG:BH2011 KEGG:ns NR:ns ## COG: BH2011 COG1062 # Protein_GI_number: 15614574 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Bacillus halodurans # 1 362 1 362 366 389 54.0 1e-108 MQVKAAVTLGYQQPFVIKDVDVSLPGKDEILVKIVATGVCHTDAVMRDNPGVVPMPAILG HEGAGIVASVGEAVSGIRVGDHVVLSYAACHHCENCLSNHPSACEEFNTLNFGGRREDGT TPYRLGDQDLSLFFGQSSFSQYVVTRASNAVVVDPEVDLTLLGPLGCGIQTGSGTVLNRL KPVIGESIVVFGCGAVGLSAIMAAKLTGCSQIIAVDIHASRLALAGELGATHQINGKEQD AVALIKQITGKGAHYAVETTGVSAIVLQAVHAVKPLGTVAIVGFTGDITFNVQNDLMAEG KSLVGVIEGDAVPALFIPLLVQQYKQGKFPIDKLIVRYPLADINQAFADSASGKVIKPVV VM >gi|289777623|gb|GG745508.1| GENE 1073 1177416 - 1179041 2128 541 aa, chain + ## HITS:1 COG:ECs2029 KEGG:ns NR:ns ## COG: ECs2029 COG3131 # Protein_GI_number: 15831283 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 540 11 550 551 1001 85.0 0 MAVAAVCGTSGVASLFSQAAFAEDAGIADGQTRRFDYTVLQAMAHDLARQPWGGAPRDLP PTLANLTPQAYNSIQYDANHSLWNNIEERKLDIQFFHVGMGFRRRVRMFSLDAATQQARE IHFRPELFKYNDAGVDTRQLEGQSDLGFAGFRVFKAPELARRDIVAFLGASYFRAVDSTY QYGLSARGLAVDTFTDTPEEFPDFTSFWFETVKGDATVFTVYALLDSPSITGAYKFTIHC QDTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRMCDTIHPQIHDSDRLSMWLGN GEWVCRPLNNPQKLQFNAFQDKNPRGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRNQW GKGAVSLMEIPTTGETLDNIVCFWQPEKAVKAGDELDFRYRLYWSAQPPVSTPLARVLAT RTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPRGIEPVITLSSGEAKQIEILY VEPFDGYRILFDWYPTSDSTDPVEMRLFLRCQGEAISETWLYQYFPPAPDKRNYVDDRIM K >gi|289777623|gb|GG745508.1| GENE 1074 1179095 - 1179673 208 192 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228004629|ref|ZP_04051602.1| acetyltransferase, ribosomal protein N-acetylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] # 14 182 6 174 184 84 30 1e-14 MTTDIPAVPETIPVTDALTLIAIDERYVSDLHQLVVKNRHWLQQSLNWPAEVNSEEETRR HVQGNVILHQRDYAKMFLLFLDHRLVGVLSFNQIEPQNKTAYIGYWIDEDHQGQGLLSRS LQAFIHHYARSGLVRRFVIKCRVANTRSNQVALRNGFVLEGCLRQAEYLNGSYDDQNIYA RIIDRDEALEGA >gi|289777623|gb|GG745508.1| GENE 1075 1179659 - 1180639 996 326 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2361 NR:ns ## KEGG: Kvar_2361 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 326 1 326 326 624 100.0 1e-177 MRKYRLSEQTRQYCYQEEAGKQSVTLRQIVALIDFADVKAGSEGGWVDAESALSQQGECW IYDANSVVFAGASIRDDARLTGPCVVSHEAAIGGRACIHASHISHHAQISDNVTINHSLV RGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATVSASRILHQAQIYGDAFVEHA FVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVIIGDVIVEHQVSINDEVQIAAQEG EAIHLRGPKTLDGQQHITRTPLLGAL >gi|289777623|gb|GG745508.1| GENE 1076 1180751 - 1181755 977 334 aa, chain + ## HITS:1 COG:ECs2034 KEGG:ns NR:ns ## COG: ECs2034 COG1275 # Protein_GI_number: 15831288 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Escherichia coli O157:H7 # 9 332 5 328 330 451 77.0 1e-126 MKSKQTPRQALNLPAGYFGMVLGTIGMGFAWRYASTLWPVSRSIGDGLVMLAIAMWALLS MAFISRAIRFPASVLREMRHPVSSSFVSLFPATTLLVAIGLVPWWRPLALGLFVPGVALQ LAYAAWQSGGLWRGTHPHEATTPGLYLPTVANNFISAMACGALGFTDAGLVFLGAGVFSW LSLEPAILQRLRSAGELPTPLRTSLGIQLAPALVACSAWLSVNGGEADTFAKLLFGYGLL QLLFMLRLMPWYLRQPFNASFWSFSFGISALATTGLHLGQARADGFFHHLAMPLFIFSNL VVGLLLLRTILLLVSGKLLVQVDRETLLNKKEGS >gi|289777623|gb|GG745508.1| GENE 1077 1181752 - 1182348 704 198 aa, chain + ## HITS:1 COG:STM1608 KEGG:ns NR:ns ## COG: STM1608 COG0500 # Protein_GI_number: 16764952 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 198 1 198 198 329 79.0 2e-90 MTTRDADYFSDKYGLTRTHSEVLHAATVVPPGRALDLGCGNGRNSLYLAANGFTVTAWDK NPMSINNLESIRAAEALENLRTAVTDLNSLTFDGEYDLILSTVVMMFLEPDTIPGLIANM QRCTAAGGYNLIVAAMDTEDYPCTVGFPFAFKPDELRDYYQGWELLKYNEDVGELHRTDA NGNRIKLRFATLLARKPA >gi|289777623|gb|GG745508.1| GENE 1078 1182609 - 1183277 964 222 aa, chain + ## HITS:1 COG:no KEGG:KPK_2411 NR:ns ## KEGG: KPK_2411 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 222 1 222 222 425 100.0 1e-118 MRTRVLLKVAALAGILALTGCAAKVAQPNQYSGFLKDYSNLKETTSASGKPELRWIDPNF NPANYDNIVYHPVTYYPVPKPTTQVGEKALQDILNYTNKELKQAISERKPLATTAGKRSL IFRGAITGVDSSKEGLQFYEVIPVAMIVAGTQAATGHRTMDTDLYFEAEVIDASTNKPVI KVVRKGEGKTLANENTPLTVDTLKQVIDDMAVDAVKFDPSQR >gi|289777623|gb|GG745508.1| GENE 1079 1183324 - 1184220 1005 298 aa, chain - ## HITS:1 COG:PA3897 KEGG:ns NR:ns ## COG: PA3897 COG0697 # Protein_GI_number: 15599092 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 1 289 1 289 300 218 50.0 1e-56 MNALLYALVVVIWGTTWIAIFLQQGPVAAPVSIFWRFAVASITMLTILLVTRRLRPLDAK DHFCCLLQGCCVFCFNFWCFYTAAAWINTGLESVIFSMAVLFNAINSFLFFRQQPPGRFW AAAALGLAGIVTLFWDDLLANGLNASLLWGIGLSALGTYGFSLGNMFSIRHQRRGLETLT TNSWAMLYGTLVMGAIALLRGDNFMPEWTVSYLGALLYLALFGSVIAFGAYFTLVGRIGA SKAAYSTLLFPLVALSISTVYEGYVWHSNAVIGLALILLGNLVMFAKPEQLLLRRRLA >gi|289777623|gb|GG745508.1| GENE 1080 1184402 - 1185271 792 289 aa, chain + ## HITS:1 COG:PA3898 KEGG:ns NR:ns ## COG: PA3898 COG2207 # Protein_GI_number: 15599093 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 3 289 7 292 293 207 40.0 2e-53 MGYGTFETLRRQNAVLRGTVELNSGIQLAAWYNNCDTVTVRSDHHTLSLYVADGYESYQK TPHGWKNGGGPDRFCLMPKGDESVWDIRGDLSFVHLYCTDEHLRRVGEEVWDRSPANFTL QEKTFASDDKITAVYRQFLLANDWRQPANQLTLSAASSLLLTHLIQHYSTVQWRLPTVTG GLAPGVKRHVLAWIDAHLDQPLTLADLAQQAGLSEFHFARMFRQSLNMAPHQYVMQQRMA RAQNLLCHSALPLTEIALACGFSSASHFSHRVKAATGLTPSQLRAAQRG >gi|289777623|gb|GG745508.1| GENE 1081 1185248 - 1186414 1344 388 aa, chain - ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 1 385 88 472 478 439 70.0 1e-123 MRSFTLPLPTLLAGFVAVLVGYASSAAIIWQAAASAGATPGQIAGWMTALGLAMGISTLA LSGWRKVPVLTAWSTPGAALLVSGLQGVTLAEAVGVFIFANALIVLCGVTGLFARLMKII PHSLAAAMLAGILLRFGLQAFAGLQEHLLLCGGMLAAWLLCKALWPRFAVVAALVVGALI AAASGDVSRTAVPLAFAAPEWIAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT VPVSALLVACGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPQQRWLAAMAAGGFYLL AGLFGGSITALMSALPAAWIQMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGV TLAGIGSAFWGVVLGGVSYGVLSALRRP >gi|289777623|gb|GG745508.1| GENE 1082 1186588 - 1187157 697 189 aa, chain + ## HITS:1 COG:ECs2037 KEGG:ns NR:ns ## COG: ECs2037 COG1396 # Protein_GI_number: 15831292 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 2 176 3 177 178 271 75.0 4e-73 MNIAQHLAATLKTLRQQRGWSLSRLAEETGVSKAMLGQIERNESSPTVATLWKIATGLNV PFSAFIVPDASAAPSAFDPQQQAMVVTPVFPWDPELRFDHFSITLAPGALSESTPHEKGV IEHVVVISGALDLCLQGEWHLLQPGEGRRFAGDEAHAYRNRGVQAAHFHSLIHYPKEKTA GEPAARQDD >gi|289777623|gb|GG745508.1| GENE 1083 1187306 - 1189330 2418 674 aa, chain + ## HITS:1 COG:ZydcP KEGG:ns NR:ns ## COG: ZydcP COG0826 # Protein_GI_number: 15801708 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 EDL933 # 15 673 10 667 667 1212 86.0 0 MPGSDYNSRHFDPLILDNNTRMRLHNHRLELLSPARDAGIAREAILHGADAVYIGGPDFG ARHNASNSLSDIAGLVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYEAGVDALIVQ DMGIMELDLPPIELHASTQCDIRSVEKAKFLSDAGFSQIVLARELNLSQIKAIYEHTDAT IEFFIHGALCVAYSGQCNISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVAYEKHLLSM KDNDQTANLAALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEDRGDLARASAGR TEHFFIPSTDKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVGKDHLDVEVSEP LTNGDGLNVMIKREVVGFRANTVEKTGENRYRVWPNEMPADLHKARPHQALNRNLDHNWQ QALLKTSSERRIAVDVTLSGWQEQLVLTMTCEDGVSVTHTLDGAFAEANQAEKALANLRD GVTKLGQTIYYPRDVQVNLPPLFVPNSLLNQLRRETAEMLDEARLNAWQRGTRKPVSVPP PVYPETHLSFLANVYNHKARAFYQRYGVQLIDAAYEAHEEKGDVPVMITKHCLRFAFNLC PKQAKGSIKSWKATPMQLIHGDEVLTLKFDCRPCEMHVVGKIKNHILKMPLPGSIVASVS PDELMKTLPKRKGA >gi|289777623|gb|GG745508.1| GENE 1084 1189343 - 1189561 335 72 aa, chain - ## HITS:1 COG:no KEGG:KPK_2418 NR:ns ## KEGG: KPK_2418 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 72 6 77 77 117 98.0 1e-25 MSALLLLCALFSGHLLAHRQGHDYFPVQSLEQQLLHEADSDELRSQCEEAAADLNEHHRW QDARKPRAPHYP >gi|289777623|gb|GG745508.1| GENE 1085 1189727 - 1190032 187 101 aa, chain - ## HITS:1 COG:no KEGG:KPK_2419 NR:ns ## KEGG: KPK_2419 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 101 1 101 101 119 99.0 3e-26 MKKLALLSAVMTLGISSWAFAADNPPPPPEKGAQHQGKPPAKNGQHDGKQAQHNGKQPQR DGKQPQHDGKQPQHDGKQPQRDGKQPPKGGEHSGKPLPPKA >gi|289777623|gb|GG745508.1| GENE 1086 1190128 - 1190253 217 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHTAWPKRLLWLIALWGGSVLTLAAISLLFRLLMNAAGLKV >gi|289777623|gb|GG745508.1| GENE 1087 1190253 - 1191263 1476 336 aa, chain - ## HITS:1 COG:STM0361 KEGG:ns NR:ns ## COG: STM0361 COG1294 # Protein_GI_number: 16763741 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 434 72.0 1e-122 MGIELSVIWFVIIVFATLMYIVMDGFDLGIGMLFGTVRGSTERDVMVNSVAPVWDGNETW LVLGGAGLFGAFPLAYAVIIDALSIPLTLMLIGLIFRGVAFEFRFQATPSHRPFWDRAFF GGSLLATFSQGVVVGAVINGFTVSGRAFSGGMFDWLTPFSLFCGLGLCVAYALLGATWLV MKSEGALQQRMRSASRQLLVALLAVFAVISLWTPLAHPAIAARWFSLPNLYFLLPVPLLV ILISGWLWRTLHQRDRHVSPFTLTLGLVFLGFSGLGISIWPHIIPPAITLWQAAAPPQSQ GFMLVGALLIIPVILGYTCWSYYVFRGKVQPGEGYH >gi|289777623|gb|GG745508.1| GENE 1088 1191263 - 1192660 1731 465 aa, chain - ## HITS:1 COG:STM0360 KEGG:ns NR:ns ## COG: STM0360 COG1271 # Protein_GI_number: 16763740 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 4 465 3 466 467 734 81.0 0 MFGLDAFHLARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKSKNPTWRSLYHFWSKI FAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW NRVGPGLHFFATCMVALGTIISTFWILASNSWMQTPQGFEIVDGQVVPVDWLAVIFNPSF PYRLLHMTVAAFLSSALFVGASAAWHLLRGNQSPAIRKMFSMALWMTLLVAPVQALIGDM HGLNTLKHQPAKIAAIEGHWENPPGEATPLLLFGWPDMAQERTRYGLEIPALGSLILTHS LDKQVPALKEFAPEDRPNATVVFWSFRLMAGLGMLMLLLGVLALWLRRGGRLYHSRPFLR FALWMGPSGLIAILAGWVTTEVGRQPWVVYGVQRTADAVSAHGDLHMSVSLLTFIVVYSA VFGVGYSYMLRLIRKGPQEVQPATTGTPARPLSAATEGYLQKESR >gi|289777623|gb|GG745508.1| GENE 1089 1193124 - 1193222 119 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEKGLQSLCITLGVMIIFWFALISLFWVVIF >gi|289777623|gb|GG745508.1| GENE 1090 1193312 - 1194754 1798 480 aa, chain + ## HITS:1 COG:STM1598 KEGG:ns NR:ns ## COG: STM1598 COG1167 # Protein_GI_number: 16764942 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Salmonella typhimurium LT2 # 11 480 1 469 474 770 83.0 0 MGGYRTGTAAMKKYQQLAQQLTEQIALGVWLPGDRLPSLREQVISSGMSFMTVSHAYQLL ESQGRIVARPQSGYYVAPQPVKLRQPAPPAQVTRDEAVDINTYIFEVLQASRQASMLPFA SAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRHAIARRYALQGMNISPDE IVITAGALEALNLSLQAVTEPGDWVVVENPCFYGALQALERLRLKALSVATDVKEGIDLT ALEAALQNYPVKACWLMTNGQNPLGFTLSAEKKAALVALLARYNVMLIEDDVYSELYFGR EKPLPAKYWDHQDMTLHCSSFSKCLVPGFRIGWVAAGKQARRIQQLQLMSTLSTSSPMQL ALVDYLSTKRYDAHLRRLRRQLAERKQLAWQALLRHLPPEVIVHHSDSGYFLWIELPEGA DASELSARALASHISIAPGKMFSTSASWTSFFRFNTAWGWGEREEQGVRRLGELIREQLT >gi|289777623|gb|GG745508.1| GENE 1091 1195060 - 1196205 1526 381 aa, chain + ## HITS:1 COG:ECs2044 KEGG:ns NR:ns ## COG: ECs2044 COG0687 # Protein_GI_number: 15831298 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 684 86.0 0 MSKKFARCSLYVLSMACLTVQAAEPLTSLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF EKETGCQVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIAGWRT LDPRIAQGAWFNVGGKAYGTPYQWGPNLLMYNTRVFPTPPDSWSVVFVKQNLPDGKTNQG RVQAYDGPIYIADAALFVKATQPQLGIEDPYQLTETQYNAVLKVLRDQQPLIHRYWHDAT VQMNDFKNEGVAASSSWPYQANGLKAEGQPIATVFPKEGVTGWADTTMLHSEAKHPVCAY KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASALLGDKGCETNGYDQFTRIHFWKTPVAE GGKYVPYSRWTQDYIAIMGGR >gi|289777623|gb|GG745508.1| GENE 1092 1196222 - 1197235 1199 337 aa, chain + ## HITS:1 COG:ydcT KEGG:ns NR:ns ## COG: ydcT COG3842 # Protein_GI_number: 16129400 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 333 1 333 337 537 80.0 1e-152 MTYAVEFQNVSRLYGDVRAVDGVSIGIRDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGT IRIFGQPASELPPWQRDVNTVFQDYALFPHMSILDNVAYGLMVKGMAKKARHARAQEALE KVALGFAHHRKPSQLSGGQRQRVAIARALVNQPRVLLLDEPLGALDLKLREQMQVELKKL QQSLGITFIFVTHDQSEALSMSDRVAVFNNGRIEQVDAPQDLYLHPKTAFVAGFVGTANV FEAEAARRLCGMPGSWSLRPEHVRLQGGGEVQVQGVVQAVQYQGAATRIELRLAEGDKLL VSQANIDGAAAASAPRMGQTVLASWSRSAMTPLESGG >gi|289777623|gb|GG745508.1| GENE 1093 1197237 - 1198166 1294 309 aa, chain + ## HITS:1 COG:ECs2046 KEGG:ns NR:ns ## COG: ECs2046 COG1176 # Protein_GI_number: 15831300 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 11 309 15 313 313 434 89.0 1e-122 MTMAMIPAQAGRVSGIFWRWPALGLFLLLLGPLMWFGIVYLGSLLTLLWQSIYTFDDFTM SVTSDFTLANLRALFNPANYDIIVRTLVMALSVTLASAMLALPMAWYMARYTSGKMKAFF YIAVMLPMWASYIVKAYAWVLLLAKDGVAQWFLGHLGLEGALNALLTVPAIGGNTLSTSG LGRFLVFVYIWLPFMILPVQAALERIPGSLLQASADLGAGPRQTFRYVVLPLAIPGIAAG SIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALYLAFV KRLGAFDAL >gi|289777623|gb|GG745508.1| GENE 1094 1198156 - 1198962 885 268 aa, chain + ## HITS:1 COG:ydcV KEGG:ns NR:ns ## COG: ydcV COG1177 # Protein_GI_number: 16129402 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli K12 # 1 262 1 262 264 380 89.0 1e-105 MHSERAPWYLQLATWGGVVFLHFPLLIIAIYAFNTEDAAFSFPPQGLTLRWFSEAAGRSD ILESVTLSLKIAALSTAIALVLGTLAAGALWRSTFFGKNAVSLLLLLPIALPGIITGLAL LTAFKAVGLEPGLLTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGATGWQTFRY VVLPNLGSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL LVMLVTTIPILGAWWLTRDGDNDAGNGK >gi|289777623|gb|GG745508.1| GENE 1095 1198985 - 1200412 1564 475 aa, chain + ## HITS:1 COG:ydcW KEGG:ns NR:ns ## COG: ydcW COG1012 # Protein_GI_number: 16129403 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 474 1 474 474 804 85.0 0 MQHNLLINGKLVAGEGEKVPVYNPATGDVILEIAEATAAQVDAAVEAADRAFDAWSQTTP KTRSECLLKLADAIAAQAETLAQLESLNCGKPLHCVINDEMPAIADVFRFFAGAARCLPG MAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLT ALKLAELAKDIFPEGVINVLFGRGKTVGDPLTSHAKVRMVSLTGSIATGAHIISHTASSI KRTHMELGGKAPVIVFDDADIDAVVDGVRTFGFYNAGQDCTAACRIYAQQGIYDQLVEKL GAAVASLKMGAPEDASTELGPLSSLAHLERVSAAVEAAKALPHIKVVTGGRRADGAGYYF QPTLLAGARQEDAIVQREVFGPVVSVTPFSDEVQALSWANDSQYGLASSVWTKDVGRAHR LSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSMYGLEDYTVVRHVMVKHG >gi|289777623|gb|GG745508.1| GENE 1096 1200745 - 1200903 75 52 aa, chain - ## HITS:1 COG:no KEGG:KP1_2988 NR:ns ## KEGG: KP1_2988 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 9 52 3 46 46 70 100.0 3e-11 MAPGRFLYFEVDMSGIITLVIALILLVAAVYNLISYIRDRRSASLPSKKTKR >gi|289777623|gb|GG745508.1| GENE 1097 1201360 - 1201611 178 83 aa, chain + ## HITS:1 COG:no KEGG:KPK_2430 NR:ns ## KEGG: KPK_2430 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 83 1 83 83 148 100.0 8e-35 MKILAFILLAIGAVTLSYGNAPAKRIQGCENAGVGQAVCAAAEWDSEQMNFLPHYNPELN KVIAAGQAAPVAYNLYNIARVRA >gi|289777623|gb|GG745508.1| GENE 1098 1201952 - 1202125 305 57 aa, chain + ## HITS:1 COG:no KEGG:KP1_2985 NR:ns ## KEGG: KP1_2985 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 57 19 75 75 91 98.0 1e-17 MTLYQKMLVFYAIMGVICAVISWFLTKESRVIRLLAALLIGATWPFSFPMALLVSLF >gi|289777623|gb|GG745508.1| GENE 1099 1202213 - 1202962 561 249 aa, chain + ## HITS:1 COG:RSp1229 KEGG:ns NR:ns ## COG: RSp1229 COG0596 # Protein_GI_number: 17549450 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Ralstonia solanacearum # 19 246 29 263 272 65 26.0 1e-10 MNGFFSSVAGATLRWLDLPGDGLPVVFIHGLGCASSYDYPRVASDPALNGRRKILIDLPG FGYSDKPHDFSYNIHIQARVVEQLLNHLRLQRFALFGHSMGGSIAIEAAGLLGERVTTLL VSEPNLFAGGGEYSRRIAAQTEAAFIAEGYARMLAEERSPWAGCLQNSAPWAVWRAASSL MRGSDTPWFTQLCQLHCQKRLIVGELSLPYADIDLAEAQGIPVGIVPRGGHSMAWENPQG LAQIIASQG >gi|289777623|gb|GG745508.1| GENE 1100 1202975 - 1204408 1550 477 aa, chain - ## HITS:1 COG:mll7197 KEGG:ns NR:ns ## COG: mll7197 COG1012 # Protein_GI_number: 13475995 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Mesorhizobium loti # 7 477 5 481 481 474 58.0 1e-133 MTITCNLYIDGQWHDAEGRRTFTRRHPAHDDVASVAAAASLADGKRCVEAAAKAFPLWRD TSPAERRRLLLDAAEHMLLREAKFIAAMAAETGATAHWAGFNVHLAADILREAAALTTQI EGQIIPSNVPGNLAMGVRQGAGVVLGMAPWNAPLILATRALATPLACGNAVILKGAELSP ATQGLIIDALDAAGFPPGVVNYLTCAPEDAPALVESLIAHPAVRRVNFTGSTPVGRIIAR TCGQYLKPAVLELGGKAPLLVLDDADIEQAAAGAVFGAFANAGQICMSTERIIVDNAVAE VFIPLLARRAAALPASLTGPVVDMNTITRCNALIDDALAKGARLLTGGKASDTHMAPTLL DGVTREMRLWNEESFGPVKAIIRVKNEEEALTVANDSEYGLSAAVYSRDSARAWNVAQRL QTGICHINGPTVHDEAQMPFGGCKASGYGRFGGRAGIAEFTELRWITLQTQPRELPF >gi|289777623|gb|GG745508.1| GENE 1101 1204678 - 1206276 2277 532 aa, chain + ## HITS:1 COG:PM0236 KEGG:ns NR:ns ## COG: PM0236 COG0747 # Protein_GI_number: 15602101 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pasteurella multocida # 5 523 2 521 532 570 53.0 1e-162 MSTGKTTLALLLSVLLPAGTAWAAGNDTLVYCSEASPESFNPQIASSGPSFVASSQVLYN RLVTFDPVKNTPIPSLATEWHVSEDGKTWTFTLRQGVKFNSNKFFKPTRDFNADDVLFSV LRQMDPQHPYHKVSQGNYEYFHDVGLDKLIKSVKKVDDYHVQFVLNEPNAAFLADWGMDF ASILSAEYGEAMLKKGTPENVDNWPVGTGPYALQQYKVDSQIRYIANPHYWEGEVPTKHL IFSITPNVETRLAKLQTNECQIIPAPSPVQFPVIKGNKDLALHAVEALNVGYLAFNTEKK PFDNVLVRQALNYATDKQAIVKAVFLDSGSVAKSPIPSTMLGYKKDLPDYDYDPQKAKAL LKQAGLEQGAEVTLWSMPVQRPYNPNSKRIAEMIQNDWAKVGVKAKIVSYEWGEYLAGMR KGEHDSALYGWMSDNGDPDNFAGTLLSCDNIQTGSNAARWCDKSYDALVKKALLVSDPQA RAKLYEQAQEIFYQQAPWITLATGKTFYATRSNVSGYRVSMMGSDFSKAKLN >gi|289777623|gb|GG745508.1| GENE 1102 1206293 - 1206526 339 77 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2389 NR:ns ## KEGG: Kvar_2389 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 77 1 77 77 115 100.0 5e-25 MAHLDEVIVKVDDTLAEGVITHMNELLIALSDDPQLSREERYTQQQRLRTAIAHHGRQHQ EEQDARREQLTKGGAIL >gi|289777623|gb|GG745508.1| GENE 1103 1206535 - 1206984 525 149 aa, chain - ## HITS:1 COG:ydcZ KEGG:ns NR:ns ## COG: ydcZ COG3238 # Protein_GI_number: 16129406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 1 149 149 183 79.0 9e-47 MNASLTLACLVAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVA GFQELALSVKWWTLIPGLLGSFFVFASISGYQTVGAATTIAVLVASQLVGGLIMDLVRAH GVPVRALIGPVCGAVMLVVGAWLVARRQF >gi|289777623|gb|GG745508.1| GENE 1104 1206981 - 1207499 676 172 aa, chain - ## HITS:1 COG:yncA KEGG:ns NR:ns ## COG: yncA COG1247 # Protein_GI_number: 16129407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Escherichia coli K12 # 1 170 1 170 172 299 83.0 2e-81 MSIRPAIKDDCAAIAEIYNHAVVHTAAIWNDKTVDTDNRIAWFEARQLAGFPVLVNEENG VITGYSSFGDWRAFDGFRHTVEHSVYVHPDHQGKGLGRKLLVALIAEARRLNKHVMVAGI ESQNHASLHLHETLGFITTGQMPQVGTKFGRWLDLTFMQLQLDERQAPDGKA >gi|289777623|gb|GG745508.1| GENE 1105 1207662 - 1208243 587 193 aa, chain + ## HITS:1 COG:mll1444 KEGG:ns NR:ns ## COG: mll1444 COG1396 # Protein_GI_number: 13471465 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 171 1 171 187 193 53.0 2e-49 MNTIEDNLNQRISARIRIERESRGWSLNDLAERAGASRAMIHKIERGESSPTASMLGRLS GAFGISMSTLIARAEMQEGKLLRFASQPVWHDPQSHYLRRHVSPRSDLPIDLVQIELPPG SDVPMPASSYALARQLIWLQQGELVFVEGTTRHEMQKGDCLELGPPNDCRFINESAETCV YLVVRLNQSPSGS >gi|289777623|gb|GG745508.1| GENE 1106 1208309 - 1209346 1099 345 aa, chain + ## HITS:1 COG:STM1589 KEGG:ns NR:ns ## COG: STM1589 COG2130 # Protein_GI_number: 16764933 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 344 12 355 356 593 81.0 1e-169 MTDQPQRHRRWVLASRPHGEPTAENFRLEESEVPTPGPGQVLLRTVYLSLDPYMRGRMSD APSYSPPVAIGAVMVGGTVSRVVSSNHADYRPGDWVLGYSGWQDYELSDGNGLVKLGDDP QHPSWSLGVLGMPGFTAYMGLLDIGQPKAGETLVVAAATGPVGATVGQIGKIKGCRTVGI AGGAEKCRYAVETLGFDVCLDHRADDFAEQLAQACPQGIDVYYENVGGKVFDAVLPLLNT AARVPVCGLVSGYNATGLPDGPDRLPLLMATILKKRIRMQGFIIGQDYGHRIAEFQQQMG RWVQEGKIKYREQLIDGLEQAPQALIGLLKGENFGKVVIRVAADD >gi|289777623|gb|GG745508.1| GENE 1107 1209409 - 1210344 1339 311 aa, chain - ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 555 86.0 1e-158 MALPMMIDCDPGHDDAIALVLALASPELEVKAVTASAGNQTPEKTLRNVLRMLTLLNRPD IPVAGGAWKPLMRDLIIADNVHGESGLDGPSLPEPTFAPQNCTAVELMARVLRESQEPVT LVATGPQTNVALLLASHPELHAKIARIVIMGGAMGLGNWQPAAEFNIFVDPQAAEMVFQS GIPVVMAGLDVTHKAQILPADIERFRQIGNPVSTIVAELLDFFMAYHKDEKWGFDGAPLH DPCTIAWLLKPEIFTTIERWVGVETEGKYTQGMTVVDYYHLTGNRPNTTLMLDVDREAFV DLLAQRLAFYA >gi|289777623|gb|GG745508.1| GENE 1108 1210626 - 1210925 313 99 aa, chain + ## HITS:1 COG:ECs4847 KEGG:ns NR:ns ## COG: ECs4847 COG3691 # Protein_GI_number: 15834101 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 98 1 98 99 102 59.0 2e-22 MKDVVDKCSTKGCAIDVGTIIDNEDCVYRAEKMFPSREEAESTVAAVRERAAAAAPASEP PQVDYTIAAAGDEVKLDLAIAFSCQAEKIIFELSLRNLL >gi|289777623|gb|GG745508.1| GENE 1109 1210998 - 1213103 2683 701 aa, chain - ## HITS:1 COG:yncD KEGG:ns NR:ns ## COG: yncD COG1629 # Protein_GI_number: 16129410 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli K12 # 1 701 1 700 700 1114 77.0 0 MKILSVRHAALPALLLPLIAAAQTADEQTMVVTAAPTTVSELDTPAAVSVVNGDEMRQAA PRVNLSESLGAVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGVRGLRIYVDGIPATMPDGQ GQTSNIDIGSVDTIEVLRGPFSALYGNSSGGVINVTSQTGTQPPTVEASSYYGSFGTWHY GMKATGAVGDGSHAGDVDYTVSTNRFTTHGYRDHSGARKNLANARLGVRINDVSKLTLLL NSVDIKANDAGGLTADEWRDNPRQSPRGDQYNTRKNTRQTQAGLRYERQLSAQDDLSVMM YAGERETTQFQSIPRAPQLKPSHAGGVIDLTRHYQGIDTRLTHRGELLVPVTLTAGLDYE NMSERRKGYENFVMVNGAPQYGEQGALRRNERNLMWNVDPYLQTQWQLTDKLSLDAGVRY SSVWFDSNDYYITPGNGDDSGDASYHKWLPAGSLKYALTDAWNVYLSAGRGFETPTINEL SYRSDNQSGLNFGLKPSTNDTVEIGSKTRLGNGLLTAALFQTNTDNEIVVDSSSGGRTSY KNAGKTRRQGMELGLDQQFGESWRLKAAWTWLDATYRTNVCDDASCNGNRIPGIARNMGY ASFGYQPEQGWYAGSDIRYMSDIMANDENTAKAPSWTVVGLTTGYKWSYGRMDMDLFGRV DNLFDREYVGSVIVNESNGRYYEPAPGRNYGIGLNLAWRFE >gi|289777623|gb|GG745508.1| GENE 1110 1213363 - 1214424 1488 353 aa, chain + ## HITS:1 COG:STM1586 KEGG:ns NR:ns ## COG: STM1586 COG3391 # Protein_GI_number: 16764930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 353 1 353 353 504 77.0 1e-142 MSLRHFAAPRLRHSLLFTSLLLAGSFSAHAADEMLRKAVGKGAYEMAYSQQENALWVATS QSRSLDKGGIVYRLDPTTLDVTQIIHNDLKPFGAAINHATGTLWFGNTVDSTVTAIDAKT GAVKGRLVLDERQRSETVRPLQPRELAVNEQTNTVYITGLGKESVIWVVDGATLKLKTTI TGTGAMATGLAIDPQAKRLYTTNADGELLTIDSESNTIVSRKKLQDDGKAHFYLNLSLDT AGHRAFITDSKQPEVLVVDTRDGKVLEKIAAPESLAVLFNPTRNEAYVTHRKAGEVSVID GKRYKIVKTFKTPTHPNSLALSDDGKTLYVSVKQASSREKEATAPDDVIRIAL >gi|289777623|gb|GG745508.1| GENE 1111 1214581 - 1214802 301 73 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2398 NR:ns ## KEGG: Kvar_2398 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 73 1 73 73 134 100.0 8e-31 MKKPFMVICAGAMLALLAGCSSNYVMTTKSGQTIVTHGKPQLDKETGMTSYIDESGNKRE INSSDVSQLVEDN >gi|289777623|gb|GG745508.1| GENE 1112 1214853 - 1216307 2090 484 aa, chain - ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 3 484 19 501 516 801 88.0 0 MNTKHDTAAEHHAAKRHWLNSHEAGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG PALALVYLVCGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFVNWAM TGIVDITAVALYMHYWGAFGDVPQWVFALGALAIVGTMNMIGVKWFAEMEFWFALVKVLA IVAFLVVGTIFLGSGKPLDGNATGFHLITDNGGFFPHGLLPALVLVQGVVFAFASIELVG TAAGECKDPESMVPKAINSVIWRIGLFYVGSVVLLVLLLPWTAYQAGQSPFVTFFSKLGV PYIGSVMNIVVLTAALSSLNSGLYSTGRILRSMSMGGSAPKFMSKMSRHHVPYAGILATL AVYVVGVFLNYLVPSQVFEIVLNVASLGIIASWGFIVVCQMRLRKAIKEGKAAKVSFRMP GAPFTSWLTLLFLFSVLVLMAFDYPNGTYTIGSIPLLAVLLVAGWFGVRKRVHAIHSTAP TLRK >gi|289777623|gb|GG745508.1| GENE 1113 1216497 - 1217384 945 295 aa, chain - ## HITS:1 COG:YPO2807 KEGG:ns NR:ns ## COG: YPO2807 COG0583 # Protein_GI_number: 16123005 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 294 1 294 297 371 61.0 1e-103 MLKENVNDLLSFMVVARERSFTRAAAQLGVSQSALSHAMRHLEARLDVRLLTRTTRSVVP TEAGERLIQRLGPHLEEMERALTALRDTRERPAGNLRITAGEHATSTVLWPALKPFMLQY PDINIEITVDNGLTDIVDGRFDAGVRLGEQVAKEMIAVRIAPDMRMAVVGSPAYLQQAGT PQTPWDLAQHRCINLRLPTRGGLYAWEFARDGRDIQVRVEGQVILNSLPQRIDAAEAGLG LAYVPDDCVAEALASGRLVQVLADWTPTFPGYHLYYPSRRQHTSAFTLLLETLRR >gi|289777623|gb|GG745508.1| GENE 1114 1217580 - 1218446 667 288 aa, chain + ## HITS:1 COG:alr4841 KEGG:ns NR:ns ## COG: alr4841 COG0253 # Protein_GI_number: 17232333 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Nostoc sp. PCC 7120 # 4 277 1 277 285 232 44.0 6e-61 MTPLHFHKYHGLGNDYLVCHRDVAEQLSNEHIQMLCHRHYGVGSDGLLIDSGDQINPTLR IINPDGSEAEKSGNGLRIYARYLFDIGRVGHEPFLVHTAGGDVYCTVHGDVHQISVDMGR ANFNPAALPALVNLPEAVNYPLPLADETLSVVLVSMGNPHCVVLVDKLDLAQVHRLGPQI ENHSLFPKRTNVQFVEVIDRHTLKIGIWERGAGFTMASGSSSCAAASAMRRLGKVDDRVD VNMPGGQLHITFDADFQVRMRGPVHKIASLTLDKDCFVGGSAIFTGAA >gi|289777623|gb|GG745508.1| GENE 1115 1218470 - 1219165 159 231 aa, chain - ## HITS:1 COG:Rv1377c KEGG:ns NR:ns ## COG: Rv1377c COG0500 # Protein_GI_number: 15608517 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 51 151 49 147 212 68 39.0 9e-12 MNPYEARYRQLLANGASAWAGDGFARAKIQQEKTFHWLDAHGYLPAPGAPVLELGCGNGV MAAQYLAERGYAVSGVDVSETAIRWAEDRFQQAGLDATFFVGNVCHLSQCEDAQFALIID GSCLHCLLEDERRRFFAEARRLLKPAGRLVIGSMCGLPRYAEDLATYDPVKHHLLKEGQP WRTLKPLPALLNEIQQAQFSVLATDVKHNAWWDHATIVCSANGPSADPQKS >gi|289777623|gb|GG745508.1| GENE 1116 1219261 - 1219812 424 183 aa, chain + ## HITS:1 COG:PA4799 KEGG:ns NR:ns ## COG: PA4799 COG0563 # Protein_GI_number: 15599993 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Pseudomonas aeruginosa # 1 176 12 186 192 132 43.0 5e-31 MNINVVGTSGSGKSTLARRLAHRLGLPWIELDRLYWRPNWQGTPDEAFFAAIAAATASPG WVLDGNYNRSRSVKWREVDLVIWVDYSLWRTLRQAVWRAASRAWRHQELWPGTGNRESFR RSFCSRESIILWTLKTWRQNRRRYLADMQDPQYRHIRFVRVRSPRQAEALLRELEAQRPG GHI >gi|289777623|gb|GG745508.1| GENE 1117 1219904 - 1220911 1081 335 aa, chain + ## HITS:1 COG:AGl2803 KEGG:ns NR:ns ## COG: AGl2803 COG2141 # Protein_GI_number: 15891512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 323 4 327 335 274 48.0 2e-73 MSYRISILDKSPLAAGETAAQALARTLTLAQHAEAWGYHRFWVAEHHNTDQLASPSPELV IAWLLGHTRRIRLGSGGVMLQHYSPYKVAENFNLLAALAPGRIDLGVGKAPGGLPLSTRA LQQGLHQEEKGTFADQLAQLDNWLSLTEPGGEESLRATPIPPRRADGFLLGASLESAELA ARLDWNFVFAAHLNGDSALRRTVINRWRELSPREAIVAVQVVVADDPATAAALAQQVEVW GVELENGQRVTVGSEAQAVAFARQAGSRPTRIHRRESSLISGTPEQVKTRLDALQAEDQL DELIIDTPISDGPARLHSLRLLAQAHYGKEVLNVL >gi|289777623|gb|GG745508.1| GENE 1118 1220901 - 1222022 1476 373 aa, chain + ## HITS:1 COG:BS_yxeP KEGG:ns NR:ns ## COG: BS_yxeP COG1473 # Protein_GI_number: 16080998 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Bacillus subtilis # 2 373 5 379 380 344 47.0 1e-94 MSFEQQLISWRRELHQNPELSLQEVATTARIRDWLQSGGLTLLPYDLKTGLVAEVGSGDK VIALRADIDALPIEEATGLPYRSQNEGVMHACGHDIHTSVMLGAALLLKEREAELPGRVR ILFQPAEENFGGAKTLIRAGALEDVSAIFGMHNEPGLPVGEFATRGGAFYANVDRFVFKV TGKGAHAARPHEGKDAILLASQLVTVLQSVASREVNTLDSVVLSVTRIQGGNTWNVLPES VELEGTLRTHSSEVQQRVKARVSEIAAGFASAFGAQIDVFWYAGPTALVNDARWADFASD VAAQAGYRTHHADLHLGGEDFAVYLQHIPGAFVSIGSASEYGLHHPAFNPDERLIAPAAH YFAQLAEQALQHI >gi|289777623|gb|GG745508.1| GENE 1119 1222047 - 1223360 1192 437 aa, chain + ## HITS:1 COG:AGl2804 KEGG:ns NR:ns ## COG: AGl2804 COG2141 # Protein_GI_number: 15891513 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 428 11 434 453 528 61.0 1e-150 MSENRQLRLGTILHGASGNMSAWRHPAAQADASINFNFVTETALKAEEGKLDFIFVADGL YINEKSIPHFLNRFEPLTVLSALAAVTRRLGLVGTLSTSYSEPFTTARQFASLDHLSQGR AGWNVVTSPLEGSAKNFSRAQHPDHALRYRIADEYLQVVKGLWDSWEEDAFVRNKETGQF FDKNKLHTLDHHGDFFKVAGPLNIARTPQGRPIIFQAGASDDGKKLAARHADAIFTHQES LAEAQAFYQDVKSQLSAYQRTPDQLHIFQGVSVIVGDDAEDAERQYQTTAALVSIEDALN YLGRYFEHHDFSQYPLDEPFPDIGDLGQNSFRSTTDEIKRHARERGLTLRQVALEAASPR PRFTGTASDVADGLQLWFEQHAADGFIIQGGTPETFPRFVDEVVPLLQARGLFRRDYPGT TLRESLGLALPANQFQE >gi|289777623|gb|GG745508.1| GENE 1120 1223378 - 1224310 1437 310 aa, chain + ## HITS:1 COG:AGl2811 KEGG:ns NR:ns ## COG: AGl2811 COG0834 # Protein_GI_number: 15891517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 308 10 309 312 268 51.0 1e-71 MQKTTLLLAVALAFSASSWAQDVKINGTGVSLEANKTPIHTAKNPQAIALLPKDLHLAVP GKFTVAVAALNSPPLTVFADDNKTLLGSETDIARLVAESLGLEVNVVPTSWEDWPLGVTS GKYDAAISNITVTKERKEKFDFATYRKDSLGFYVKSTSPLNKIDKAEDIAGLKIIVGSGT NQEAILLAWNAENVKKGLKPFTPVYTKDDAAQTLALQTGRADAYFGPNVIGAWKAALTGK TKLVGSVDGGWPKAAHIAVTLKKDSGLVNAVQAALNGAIASGDYAKVLNRWGEGVESIPQ SEINPPGLGD >gi|289777623|gb|GG745508.1| GENE 1121 1224322 - 1224831 730 169 aa, chain + ## HITS:1 COG:AGl2808 KEGG:ns NR:ns ## COG: AGl2808 COG0454 # Protein_GI_number: 15891515 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 157 1 162 181 129 46.0 2e-30 MSEAFRDISPDAPELQPIISGLFAEYAARYGDYFSRDAEVELTEWYLPPQGLFIVLEREG EIIATGAYKPKDRHTAEIKRIWTHRRLRQQGLAAKVVQELERRAVLAGYSHIYLTTGFRQ PEAVKLYLSQGYEAQFDLTRDPEEYSQPPYDGRLRFTKALAVSAFSHSA >gi|289777623|gb|GG745508.1| GENE 1122 1224841 - 1225767 1417 308 aa, chain + ## HITS:1 COG:AGl2810_1 KEGG:ns NR:ns ## COG: AGl2810_1 COG0765 # Protein_GI_number: 15891516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 267 22 281 283 261 58.0 8e-70 MHSSETIKVVPARYPLRVVGALVALLVLAVVIQSVAFNPRWEWGVFARWFFDPVILEGLG QTLLLTLLGTVLSVIFGGLLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYL YDTLSLGIPFTGVTWASYQTINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEA AAALGLPAWRRTLRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNR TQEVIPLLMVGAAWYLAITSVLSAIQYLVERALARSERRSAVNSARSSRLNQPARQPQPQ EAVHAQLS >gi|289777623|gb|GG745508.1| GENE 1123 1225751 - 1226530 258 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 1 245 1 235 312 103 30 2e-20 MPSSHNGHISITGVSKYYGRHKALDDVSLEIPPGTVTVILGPSGSGKSTLLRTINHLERV DEGFIQIDGDYIGYRRKGDKLYEMKEKEILRQRINVGYVFQNFNLFPHLTVLENLIEAPI AHKQVTRKEAIARAYELLDVVGLRNKADAWSRHLSGGQQQRIAIARALALDPRVILFDEP TSALDPELVGEVLDVIKKLARSGTTLVVVTHEVGFAREVADQVVFMVDGRIVEQGSSDEV LNHPQHPRTRQFLSRVLPS >gi|289777623|gb|GG745508.1| GENE 1124 1226527 - 1227420 1108 297 aa, chain + ## HITS:1 COG:AGl2813 KEGG:ns NR:ns ## COG: AGl2813 COG0834 # Protein_GI_number: 15891518 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 295 69 352 355 224 46.0 2e-58 MNRALMTLVLSAFAMSAHAALDLRANEQPLPVTRDPQAIAKIPPGYRFVEPGTLTVAISA LNSPPLALLASDNRTRIGSDPDMARLLAGSLGLKLRLVPTAWEDWPLGIASGRYDVALIN IAVTEKRKEKFDFATYRVDSLAFSVKSTSDIAAVNGPADLAGRKVIVGSGTNQERILLGW NEDNRAAGRPQAQPVYLTDDASGNLYIQSGRADIFFGPQSVAAYKAALNGQTRVVGLGPK KAWVATTTKKGNGLVFALQAALDGAIARGEYQQVLARWGEQGEAVAQSVVNPPGITY >gi|289777623|gb|GG745508.1| GENE 1125 1227486 - 1228796 1643 436 aa, chain - ## HITS:1 COG:STM3698 KEGG:ns NR:ns ## COG: STM3698 COG0477 # Protein_GI_number: 16766983 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 432 1 432 436 728 88.0 0 MQQQIKRSNVRYGILVFLFLATVFNYADRATLSVVAPMMSKELGFDPEAMGLAFSVFGIS YVIMQIPGGWLLDKYGSRLVYGCALIGWSVVTMFQGTVYLFASPLVVLVILRLMMGAIEA PAFPANSRLSVQWFPNKERGFVTSVYQAAQYISLGIITPLMTIILHNLSWHYVFYYIGAI GVVLGIFWLVKVKDPSHHPKINPQELDYIREGGGVPELGSQKTPQKLTLAQIKSVCVNRM MIGVYIGQFCVTSITWFFLTWFPTYLYQAKGMSILKVGFVASIPAIAGFIGGLLGGVFSD WLLKRGYSLTTARKLPVICGMLLSCVIVVANYTSSEVVVIAAMSLAFFAKGFGNLGWCVL SDTSPKEMLGIAGGVFNMCGNLASIITPLVIGVILANTHSFDYAILYVGSMGVLGLFSYL FIVGPLDRLTLTPRTV >gi|289777623|gb|GG745508.1| GENE 1126 1229001 - 1230197 1609 398 aa, chain - ## HITS:1 COG:STM3697 KEGG:ns NR:ns ## COG: STM3697 COG4948 # Protein_GI_number: 16766982 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Salmonella typhimurium LT2 # 1 398 1 398 398 767 93.0 0 MTSSANSESVTYAKAFGVKTAAETGDRIDHVKLSLAFLPLATPVSDAKVLTGRQKPLTEV AIIIAEIHSRDGFTGVGFSYSKRAGGQGIYAHAKEIADNLLGEDPNDIDKIYTKLLWAGA SVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGSHRDSVQCYNTSGGFLHTPLDQVL KNVAISRENGIGGIKLKVGQPNTAEDIRRLTAVREVLGDDFPLMVDANQQWDRETAIRMG RKMEPFNLIWIEEPLDAYDVEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQP DAPRVGGISPFLKIMDLAAKHGRKLAPHFAMEVHLHLAAAYPLEPWLEHFEWLTPLFNEQ LELRDGRMWVSERHGLGFTLSEQARRWTQQSCEFGKRP >gi|289777623|gb|GG745508.1| GENE 1127 1230502 - 1231506 1033 334 aa, chain + ## HITS:1 COG:STM3696 KEGG:ns NR:ns ## COG: STM3696 COG1609 # Protein_GI_number: 16766981 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 507 79.0 1e-143 MKSKKPTRAPTLEDVARSAGLSPMTVSRALNTPQLVRPKTVEKVMQAVQATGYIPNALAG GLASRRSKLVAVVVPQINNNMFVDTIQALSDTLAARGYHMLLCVAGYDRQTEAELVSTLL SRRPDGVVLTGIQHAPLLKKTILNAATPVVEIWDLTPTPLDMLVGFSHEKVGETIGEYVL EKGYQRPGLLWAGDARAMLRKQGLCARLAKKGLDDAPQVEVPLPASLALGRRGLAELLAA SEFDVIICSSDTLAQGAIMEAESRGLRVPQDLAVIGFGDLDFAASNRPAITTVSVDRHAI GERAATLLADRIEGGDDSGVIIDIGFQLVARESA >gi|289777623|gb|GG745508.1| GENE 1128 1231590 - 1232207 783 205 aa, chain + ## HITS:1 COG:yncG KEGG:ns NR:ns ## COG: yncG COG0625 # Protein_GI_number: 16129413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 205 1 205 205 279 65.0 3e-75 MITVYGVPGWGSTISELMLSLADIPYEVVDVEGFDQPGPARERLRQINPLCQVPTLRLAD GSIMTETAAIALMILDQRPDLAPAPGTPQRQQFQRLLVWLVANVYPTFTYADYPERWAPA AAEQLVENCRQYRKNLYLWFEQQLAAGPWALGSSVTLLDCYIAAMYSWGPRQAWFDDHAP KFAAIARAVCQRPELAAALRRNKLI >gi|289777623|gb|GG745508.1| GENE 1129 1232278 - 1232505 363 75 aa, chain + ## HITS:1 COG:ZydcE KEGG:ns NR:ns ## COG: ZydcE COG1942 # Protein_GI_number: 15801678 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Escherichia coli O157:H7 EDL933 # 1 75 14 88 88 116 73.0 1e-26 MPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQVEPDAWQAVWDSEI APQMAQLIKKPGYSM >gi|289777623|gb|GG745508.1| GENE 1130 1232545 - 1234155 1912 536 aa, chain - ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 107 536 27 423 423 85 27.0 2e-16 MRISVISAAVCCALFPLTSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTAAA EQRAAAAEQQVQALSQQTTAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVNSH GKGARGGPGISPASSLNGDAHVGRLGNEKDNYAELSFGKKLTFNDGSWARFKTMLADGAT NPDPWVQDNDSHHLNIRQLYVEMGDFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDIMF LGGTGGGINDVDWGSGLRGDYSVYARNFGELGSDNYADNDIQNLLFTANHFYGNWQLMTT VMTAQGNDDLKDNTSTTGSYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQYGV GLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQLAPSVIAQHSEDRYRDGDRYDWA TFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPTFK VGDVFDIKARPEIRFFVTWMNWDKDLDRYAINDDFGSKGFTAGGTWNFGVQTEIWF >gi|289777623|gb|GG745508.1| GENE 1131 1234198 - 1235574 2108 458 aa, chain - ## HITS:1 COG:CAC3422 KEGG:ns NR:ns ## COG: CAC3422 COG2211 # Protein_GI_number: 15896663 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 11 440 10 437 445 245 35.0 1e-64 MAETTFTLWRQRLGYGIADLSCNLVWQMISLYLMFFYTDVMGLPAYYVGLMFLVTRLVDG VADVLMGLVIDNTATRWGRCRPWLLIGALPFGLLCILAFYVPDFGTTGKLLYAFITYLCL SFLYTLVNIPFCAMLPFLTSDSAERTTLSAVRILLGSLGATIVAVATLPLVGMLGKGDQQ QGFLYTAVIFGVLAAFFLLVSFRNVEEKITLTGERMTLKRAWISLRANRPWWIFASNIFL MWGAFFFQTGALVYFFHYYVGNTELTAVIAGISTFVPLLGTLTVPLLARRMKKRHVYLVA SAVNLLGMGMMMLSGTYALGLIVGAVILSLGAGQRTAIYFSMQADPVDYGVWKTGINTAG ILTSINGFLGKVAMAGAGAITGALLSSGGYIANQAQSDSALLAIKACYLYIPALLILASM LWMGRFYRLDDHYEQIRADLDAGRGASPAPTTGESPAM >gi|289777623|gb|GG745508.1| GENE 1132 1235598 - 1237166 1721 522 aa, chain - ## HITS:1 COG:no KEGG:KPK_2466 NR:ns ## KEGG: KPK_2466 # Name: not_defined # Def: alpha-L-rhamnosidase family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 522 1 522 522 1048 99.0 0 MSQAIQYNSSVAMTRHPHLLQRAAALTPALHRQRQAPQAIVEAVADPAALNGWRGHTVCT PEQFYQQPLRVGDSIIIDFGSHFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFS EYQGWLSSSWLQQQDLWLDVLPARVDLPRRYCLRYLKVEVKALSRKFRLQFDEIALETVT SAGSPQSAVIADPQLKAIDDVAVRTLQNCMQEVFEDGPKRDRRLWLGDLRLQALVNDVTF GHHDLVRRCLYLFAGHTREDGMVSANVFVQPDVRADDTFLFDYSLFFIDVLYNYLQTTGD TETVGELWPTARRQIELALTRCDPHGLVRDSDDWWAFIDWQAELNKQSSAQGVLIYCLQR ALWLAQRVEPQRVADYTATLAQLKEAALRHLWDSERQVFISGAARQVSWASQIWLVLAEV GTAGQRQALMRRLQQQPPAIAMNTPYLRHHHIVALLQCGLREEAVAEIKAYWGAMVDSGA DTFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL >gi|289777623|gb|GG745508.1| GENE 1133 1237371 - 1238195 912 274 aa, chain + ## HITS:1 COG:STM4048 KEGG:ns NR:ns ## COG: STM4048 COG2207 # Protein_GI_number: 16767314 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 24 270 24 271 278 162 38.0 8e-40 MMTLTVEYYFTHPQDKLGMYASDPEDNSQEHGHEFAELVIVEEGHGLHVINGRPLYIQQG DVFYVQPGDVHYYDELGTLKLINVLINPAVAFRYLQQMEGLLQQLSAQRAACYGWLAPET RSYCRELVEKIFSPALRAADNTPQRESLFFQLVTTILTAESEAEYSSTRYKLHKLLTWLQ EHCFEEHNWQQLAEQFHLTTRTAFRHIKEATGLTPDNYLKRLRLVSARVKLRETEMSITE VAYLCGFANSNHFTTLYKKVFGLTPSADRRRPPG >gi|289777623|gb|GG745508.1| GENE 1134 1238252 - 1238833 747 193 aa, chain - ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 1 188 17 204 205 320 80.0 1e-87 MSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKST WTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEK CLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFV ASGRHVRANSLDE >gi|289777623|gb|GG745508.1| GENE 1135 1239048 - 1239749 195 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 27 219 33 221 318 79 29 4e-13 MRTLTPITLQEVSFAFAETPVLDRFSLHIEPGRIVALLGPSGCGKSTLLRLLAGLSVPVS GEIRFGDRLVARAGWGLPPEQRDIGMVFQDYALWPHMSVAQNVAFPLRMRGVSRSERERR VSEALARVGLNGFAERKPSGLSGGQQQRVALARAIVAAPRVLLFDEPLSNLDSELRESLC GEMSRLLRQLGITAVYVTHDRREAELLADQIVYLSAGRVAAVRAVTPTSGEVA >gi|289777623|gb|GG745508.1| GENE 1136 1239746 - 1240714 1300 322 aa, chain + ## HITS:1 COG:mll3626 KEGG:ns NR:ns ## COG: mll3626 COG1840 # Protein_GI_number: 13473128 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Mesorhizobium loti # 22 298 23 301 328 130 31.0 4e-30 MNTVMTVKKGVVLAMALSAMMLSSAHALTVYTAGPGSLAKSLASGFEQQTGVKVTVFQAT TGKVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANADQVPANLKSADYIAQ GVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIGLQNSMGDQAW QLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNIQQGESLKVIFPASGTV IAPRPMMILKTSQHADDAKAFIDYVLSPEGQARVADAWLMPARRDVAAKRPLLDALKVLP TTSEGSSERGAVLARFSQLYAQ >gi|289777623|gb|GG745508.1| GENE 1137 1240773 - 1242428 2243 551 aa, chain + ## HITS:1 COG:PM1455 KEGG:ns NR:ns ## COG: PM1455 COG1178 # Protein_GI_number: 15603320 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Pasteurella multocida # 10 532 20 545 564 186 27.0 1e-46 MKQTFLSGATLAALVMLVALPLVFILLQAIFPHFSAGSLGDAFGGVSALLADPQLPAMLG GTLWIAAGVALVSVMIGLPLGILRGMFSLPLPRLWDLLFLIPFLTPPYISALSWMLALQS QGYLQQLTGWQLNDLLFSRSGIVLVMTFNIFPVVYFAVSRSLLASGTRLAVVARVHGASA WRAFWHVTLPMLSPALAAGTLLAFTLAIEEFGVPAALGSRAGVVMLTVGIEKKLADWPVD LTGAALLSLLLMAVALFAWWLQIRLVGEKEVTSVTGKPGENRGASLGVMTLPAVLIMAAV GGLAVGVPAASMMLTSVMGTLSGGVSVENVTLRHFAALFDQQGDALSALGTSLSLALGSA LIVGALGLLAAWLVMVQKIKGRGMVDALSLMPAALPGVVVGVGLILLWNQPFWPRSPYNT LWMLLLSYCCLLLPWPVRYVGSALRQLGPNLEPAARVHGASPLQALRLIILPLVFPALLA AMLMVFAVASRELVTSLLLSPAGTQTVAVFIWRQFEQGSVGQGMAMASLTLLTGLVLMLT ALALMQRSTRG >gi|289777623|gb|GG745508.1| GENE 1138 1242505 - 1243350 1184 281 aa, chain + ## HITS:1 COG:nhoA KEGG:ns NR:ns ## COG: nhoA COG2162 # Protein_GI_number: 16129422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Arylamine N-acetyltransferase # Organism: Escherichia coli K12 # 1 281 1 281 281 436 74.0 1e-122 MSPFLRAYFSRLGWTGEPDVSIDTLRELHLQHNSAIPFENLDVLLPREIHLDDRALEEKL IAARRGGYCFEQNGLLERALREIGFNVRSLLGRVVLANPPQMPPRTHRLLLVEVAGERWI ADVGFGGQTLTAPIKLLADIPQQTPHGSYRLVHEGDEWTLQFNHHEHWQSMYHFDLGRQY ASDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKMTLTNFHFTHWENNHVVEKIDFADVS ALYEALQTRFGLGVDDPKHGFSEAALAAVMAAFDTHPEAGK >gi|289777623|gb|GG745508.1| GENE 1139 1243539 - 1244114 583 191 aa, chain - ## HITS:1 COG:STM1575 KEGG:ns NR:ns ## COG: STM1575 COG1309 # Protein_GI_number: 16764919 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 191 1 191 192 241 64.0 7e-64 MHYLQRDARREGIMQAAMRLALRGGFAAMTVRQIAREAEVAAGQLHHHFASIGELKSQVF IRLIREMLDMPLVAEDASWRERLFSMIGSEDGRLEPYIRLWREGQVLADSDPDIKAAYLL TMNMWHEETVAIIEQGLACGEFHSSEPPADIAWRFIALVCGLDGIYALGTQALDDAAFSR YLNKMITMELF >gi|289777623|gb|GG745508.1| GENE 1140 1244234 - 1245733 2117 499 aa, chain + ## HITS:1 COG:STM1574 KEGG:ns NR:ns ## COG: STM1574 COG0477 # Protein_GI_number: 16764918 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 494 1 494 495 544 73.0 1e-154 MSRQWMTLMAILLVYIPVAIDATVLHVAAPTLSVALGSSGNELLWIIDIYSLVMAGMVLP MGALGDKIGFKRLLLLGSAIFGVASLCAALSPTALTLIASRALLAVGAAMIVPATLAGIR STFAEASQRNMALGLWAAVGSGGAAFGPLVGGMLLEHFYWGSVFLINVPIVLVVIAINAK VVPRQPARREQPLNLLQALILIASILMLVFSAKSALKGQLALWLTALVAIGGAAMLTWFI RKQLSATRPMVDMRLFTHRIILSGVMMAMTALITLVGFELLMAQELQFVHQKTPFEAGMF MLPVMVASGFSGPIAGLLVSRLGLREVATGGMLLSAFSFLGLALTDFSSQPWQAWGLMTL LGFSVASALLASSSAIMAAAPKEKAAAAGAIETMAYELGAGLGIALFGLILTRSYSATIV LPSGLSESMAQQASSSIGEAVSLTQSLPAGMAEALMAAAKAAFTQAHSLVLATAGVLLLL LAAGIWRSLASVAKPQSAL >gi|289777623|gb|GG745508.1| GENE 1141 1245728 - 1246525 935 265 aa, chain - ## HITS:1 COG:PA0155 KEGG:ns NR:ns ## COG: PA0155 COG1414 # Protein_GI_number: 15595353 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 6 265 14 277 279 199 50.0 3e-51 MRDHTPTTLSARQAEHDPNFMLSLARGLEVLNAFTPQRQRLTISQLSQKTQISRAAVRRC LYTLAALGMVHSPDGRSYELLPRVLAVGHAYLAGTPLAKVAQTALDSLGKALGESCSAAT LDGDNVLYIARAAVNNLLSIDLGRGSRLPAWATSMGRVLLSALPEEQLEVTLSRAALIRY TPHTLCDMPGLRAEIARVRMQGYALADRQIEVGLCSLAVPVLSRHGQVVAALNVGVPAAT TSAAALKEKALAPLRRAAMDLSLQL >gi|289777623|gb|GG745508.1| GENE 1142 1246781 - 1247899 1396 372 aa, chain + ## HITS:1 COG:PA2509 KEGG:ns NR:ns ## COG: PA2509 COG4948 # Protein_GI_number: 15597705 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Pseudomonas aeruginosa # 3 371 4 373 373 366 55.0 1e-101 MTATVERIESWIVDVPTIRPHKLSMTTMGCQTLVIVRLTRSDGICGIGEATTIGGLSYGV ESPEAISSAITHYLTPLLKGQPADNLNALTARMNSAIKGNTFAKSAIETALLDAQGKALG LPVSALLGGALQTALPVLWTLASGDTAKDIAEGETLLAERRHQAFKLKIGARELATDLRH TRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGVDLIEQPVSAHDNAALVRLSQQ IETAVLADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGVGLYGGT MLEGTVGTVASLHAWSTLPLQWGTEMFGPLLLKDDIVSVPLTFADGQVALSQTPGLGVEL DEDKLRFYSRKA >gi|289777623|gb|GG745508.1| GENE 1143 1247912 - 1248202 419 96 aa, chain + ## HITS:1 COG:PA2508 KEGG:ns NR:ns ## COG: PA2508 COG4829 # Protein_GI_number: 15597704 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Muconolactone delta-isomerase # Organism: Pseudomonas aeruginosa # 1 95 1 95 96 114 53.0 3e-26 MLFKVEMTVNIPLGFPAAEADEIKQREKAYSQQLQREGKWRHIWRVAGLYANVSIFDVKD AEELHQILMGLPLYPFMDIRVEALCRHPSSVREDDS >gi|289777623|gb|GG745508.1| GENE 1144 1248272 - 1249198 1310 308 aa, chain + ## HITS:1 COG:PA2507 KEGG:ns NR:ns ## COG: PA2507 COG3485 # Protein_GI_number: 15597703 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Pseudomonas aeruginosa # 1 306 1 307 310 342 61.0 5e-94 MSNAFVQQEAVQKLLREGAGLNVPGGNERFKAIVHRLLENICTLIDDYNVTEEEFWHAVN YLHELGGRQEAALLAAGLGLEHFLDLRQDAIDAAARRETGTPRTIEGPLYVANAPLADSH ARMDDGADAGEVMWLHGQVKDNQGQPIANAIVDIWHANTLGNYSFFDQSQSDYNLRRRIR TGTDGRYSVRSIMPSGYGCPPDGPTQKLLDQLGRHGNRPAHIHFFVSAPGHKHLTSQINL SGDKYLWDDFAFATRDGLIADPVKVTDRETIAQRDLEGEHTEVCFDFTLCKALNADEEHR GTRLRAKE >gi|289777623|gb|GG745508.1| GENE 1145 1249308 - 1250690 1589 460 aa, chain + ## HITS:1 COG:PA2518 KEGG:ns NR:ns ## COG: PA2518 COG4638 # Protein_GI_number: 15597714 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 5 457 1 448 455 583 60.0 1e-166 MQKTLSALKDKINNALIVDRENHIYRCHRSIFTDQQLFDFEMKHIFEGNWVFLAHESQIA EPGDYYTLTLGRQPVIITRDKKNDLHALINSCAHRGAMLCRRKTGNKNSFTCPFHGWTFS NNGKLLKAKDESTGAYPDTFKQEGSHDLQKLPRFQSYRGFLFGSLNADVQSLEAYLGETR KIIDLIVDQAPDGLEVLKGSSSYVYEGNWKLGAENGADGYHVSVVHWNYASTMSRRNYEA EGTHAVDANGWSKSVGGGYGFDNGHMLLWTRALNPEVRPVYAHRERLQAEFGERRADQMV NETRNLCLYPNVYLMDQFSTQIRVIRPIAVDKTEVTIWCFAPKGESDQARALRIRQYEDF FNVSGMGTPDDLEEFSACQRGYLGENLPWSDLSRGALRWVDGPDEHAKHAGFTPRLSGVK SEDEALYIAHHHHWQTVMLAALEQEQQRYDQSITQRVEVA >gi|289777623|gb|GG745508.1| GENE 1146 1250690 - 1251175 596 161 aa, chain + ## HITS:1 COG:PA2517 KEGG:ns NR:ns ## COG: PA2517 COG5517 # Protein_GI_number: 15597713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Small subunit of phenylpropionate dioxygenase # Organism: Pseudomonas aeruginosa # 2 161 3 162 162 176 55.0 1e-44 MLNLEHVRQFLYYEARLLDDRQWDEWLSCYSPQVVYWMPAWGDDDQLTRDPQKEISLIYY PNREGLEDRVYRIKTERSGASTPEPRTTHIISNVELMGESDEGLEVRYNWVTWSHRYQHT DAYFGSTCCTLIEQDGRPQIVRKTVRLNNDYIRQVIDVYHI >gi|289777623|gb|GG745508.1| GENE 1147 1251185 - 1252201 1114 338 aa, chain + ## HITS:1 COG:PA2516 KEGG:ns NR:ns ## COG: PA2516 COG0543 # Protein_GI_number: 15597712 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pseudomonas aeruginosa # 1 335 1 337 337 374 54.0 1e-103 MTFNIALNFEDGITRFIQCHAGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYDLG EDYLDEALSDDEAQARQVLTCQMVPTSDCVIDVPVAAAQCKTALTNTGAQVRQVNCLSDT AIELVVALDEPLAFLPGQYINIQVPGTPHVRAYSFSSLPGSLEGRFLIRNVPGGMMSQWL TQQARPGDRLTLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLHTLQTQGSQRPVTLLY GVTRDCDLVKTDALDAFNQQLTGYRWLPVVADENSTCPQRGFVTDHLDDAMLNNGDVDIY LCGPPPMVNAVATTLRDRGISPAGFWYEKFIASQSAAA >gi|289777623|gb|GG745508.1| GENE 1148 1252211 - 1252984 885 257 aa, chain + ## HITS:1 COG:PA2515 KEGG:ns NR:ns ## COG: PA2515 COG1028 # Protein_GI_number: 15597711 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 2 257 4 253 253 303 61.0 2e-82 MRFTDKVVAITGAAQGIGRQTAEQAATEGAALLLIDRSPYVHELAAVLAQAGSQVLALEA DLEQWQSTEQAFAAGVVHFGRLDVLINNVGGTIWARPFAEYQPEQIEKEIRRSLFPTLWG CRAALPWMLKQGKGSIVNISSVATAGVNRVPYSAAKGGVNALTRSIAMEYSGSGIRINAV APGGTEAPPRLTPRNDEQPSEQEKAWYQQVVDQTVASSLMRRYGTLAEQANAILFLASDE ASYITGVTLPVAGGDLG >gi|289777623|gb|GG745508.1| GENE 1149 1252981 - 1253859 1050 292 aa, chain - ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 292 1 292 293 394 77.0 1e-109 MQKKRATSIGFAAIILWSTMVGLIRGVSEGLGPVGGAAMIYSLSGLLLIFTVGFPNLRQI PRRYLLAGSVLFVSYEICLALSLGFAATRQQAIEVGMVNYLWPSLTILFAILFNGQKSSW LVIPGLLLALFGVSWVLGGEHGLNPEEIINNVVSSPLSYILAFVGAFIWAAYCTVTAKYA KGKNGITLFVLLTALTLWLKFLASAQPPMLFSWPVVIKLITVSVALGLAYAAWNIGILHG NVSLLAAASYFTPVLSSALAAVLLSAALSWSFWQGAGMVCLGSLLCWYATRR >gi|289777623|gb|GG745508.1| GENE 1150 1254085 - 1254672 687 195 aa, chain + ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 195 1 195 1015 397 94.0 1e-111 MDVSRRKFFKICAGGMAGTTAAALGFAPKMALAQARNFKLLRAKEIRNTCTYCSVGCGLL MYSLGDGAKNAKEAIYHIEGDPDHPVSRGALCPKGAGLLDYVHSENRLRYPQYRAPGSDK WQRISWDEAFNRIARLMKADRDANFIEKNEQGVTVNRWLSTGMLCASAASNETGMLTQKF VRSLGMLAVDNQARV >gi|289777623|gb|GG745508.1| GENE 1151 1254721 - 1257132 3144 803 aa, chain + ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 803 213 1015 1015 1549 91.0 0 MTNHWVDIKNANVVVVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLLYLIENNKINAEYVKHYTNASLLVRDDFAFEEGLFSGYDAEKRQ YDKSSWNYQFDENGYAKRDKTLSHPRCVWNLLRQHVSRYTPEVVENICGTPKADFLKVCE VLASTSAADRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSDKQSDLQSYLSANTPKATLPDQVNYWSNYPTFFVSLMKSF YGEAAQKENDWGFNWLPKWDQAYDVIKYFNMMDNGNVTGYICQGFNPVASFPDKNKVVRS LSKLKYLVVIDPLVTETSTFWQNHGESNDVDPAAIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGQDAPGEARNDGEILAGIYHRLRELYRREGGKGAEPLLKMSWSYKQPDHPESAE VAKENNGYALADLYDQNGALLAKKGQLLNSFALLRDDGSTASSCWIYTGSWTEQGNQMAN RDNADPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDAKRMLIQWNGSKWVGNDIPD FNTAPPGSNTGPFIMQQEGLGRLFALDKLAEGPFPEHYEPMETPLGTNPLHPKVVSSPVV RLYEEDAIRLGKKDKFPYVGTTYRLTEHFHTWTKHALLNSIAQPEQFVEISEGLAKSKGI ANGDWVKVSSKRGFIRAVAVVTRRLRTLNVNGQQVETVGIPLHWGFEGVARKGYIANTLT PNVGDSNSQTPEYKAFLVNIEKA >gi|289777623|gb|GG745508.1| GENE 1152 1257144 - 1258028 993 294 aa, chain + ## HITS:1 COG:fdnH KEGG:ns NR:ns ## COG: fdnH COG0437 # Protein_GI_number: 16129434 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 294 1 294 294 568 91.0 1e-162 MAMETQDIIKRSATNPITPAPRARDYKAEVAKLIDVSSCVGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEEPGCLKACPSAGAIIQ YANGIVDFQQENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGTKKEMLEVAQERVDKLKKRGYANAGIYNPQGVGGTHVMYVLHHADQPELYHKL PKEPQIDTSISLWKGALKPLAAAGFIATFAGLIYHYIGIGPNKEVDDDEEKHDE >gi|289777623|gb|GG745508.1| GENE 1153 1258021 - 1258677 859 218 aa, chain + ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 218 1 218 218 378 87.0 1e-105 MSKSKMIVRTTFIDRACHWTVVICFFLVALSGISFFFPTLQWLTETFGTPQMGRILHPFF GVLIFVALMFMFVRLVHHNIPDKQDIPWLKGIVEVLKGNEHKVARVGKYNAGQKMMFWTI MSMIFVLLVTGVIIWRPYFADYFPIPVIRYSLLIHATSAIILIHAILIHMYMAFWVKGSI KGMIEGKVSRRWAKKHHPRWYRDVERLEAMKESREGMK >gi|289777623|gb|GG745508.1| GENE 1154 1258730 - 1259053 58 107 aa, chain - ## HITS:1 COG:no KEGG:KPK_2492 NR:ns ## KEGG: KPK_2492 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 107 1 107 107 206 100.0 3e-52 MLEQFNVYRNCSAQTNKTLPYYMIVQNDYYADLATRVIIPLMRTQQLPRWHQHVVPRINI EFDSFLLCTPMISNLNNKRIQPQDFVCNLSHARQGVIDSIDTLITNC >gi|289777623|gb|GG745508.1| GENE 1155 1259417 - 1260235 950 272 aa, chain - ## HITS:1 COG:VC0728 KEGG:ns NR:ns ## COG: VC0728 COG2326 # Protein_GI_number: 15640747 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 17 272 2 258 258 290 56.0 2e-78 MGNKKNGNPVDAAVKTAPLDNKAYEKALRKLHVELVKLQRWVVHKGLKVCIVFEGRDGAG KGGTIKAITERVSPRIFRVVALPSPTEREKSQLYFQRYIKHLPAAGEIVIFDRSWYNRAG VERVMGFCTPEEVQKFLDGAPMVERGMVESGIILLKYWLEVSPQEQERRLRDRIDDGRKI WKLSPMDIKSFNRWDEYTAARDAMFAATDTAWAPWFVARSEDKKRVRLNIITHLLSQIPY EALPVEHVTLPKRKIGKMKQTNFPFRFIPEKF >gi|289777623|gb|GG745508.1| GENE 1156 1260322 - 1260759 559 145 aa, chain - ## HITS:1 COG:PA2024 KEGG:ns NR:ns ## COG: PA2024 COG0346 # Protein_GI_number: 15597220 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pseudomonas aeruginosa # 8 135 5 131 140 68 32.0 5e-12 MHTVDVGFTHVAFTVRCLASSIDFYTRYTAMTVIHQREPGLPSARKVAWLSDRTRPFALV LVQSDDPADTPLGPFGHLGVACATQAEIDEKVAQARREGVLRREPEQLGDPVGYFAFFAD PDGNTLELSWGQRVGLEVIAAGNAS >gi|289777623|gb|GG745508.1| GENE 1157 1261037 - 1262191 1375 384 aa, chain + ## HITS:1 COG:ECs0446 KEGG:ns NR:ns ## COG: ECs0446 COG2814 # Protein_GI_number: 15829700 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 1 383 1 383 394 469 72.0 1e-132 MKKTIFSLALGTFGLGMAEFGIMGVLPDMAHDVGMSIPAAGNMIAWYAFGVVIGAPIMAL LSSRFSLKSVMLFLAALCILGNTLFTLSSSYAMLALGRLVSGFPHGAFFGVGAIILSKIA PPGKVTAAVAGMIGGMTVANLVGVPGGTWLGHHFNWRYTFALIAVFNVAVLMTIFCWVPT LYDRTSTRLREQFRFLASPAPWLIFAATMFGNAGVFAWFSYIKPFMINVSGFAESRMMLI MMLAGLGMVVGNLFSGKISGRFSPLRIAAITDGVIAVTLLLIFAFGEHKVASLTLAFICC AGLFALSAPLQILLLQNAKGGEMLGAAGGQIAFNLGSAIGAFCGGMMIAQGFGWNSVALP AATLSFLAMSALLIYGCHQRRQAC >gi|289777623|gb|GG745508.1| GENE 1158 1262198 - 1263289 1713 363 aa, chain - ## HITS:1 COG:Cgl2381_2 KEGG:ns NR:ns ## COG: Cgl2381_2 COG2128 # Protein_GI_number: 19553631 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 175 360 2 185 192 144 47.0 2e-34 MTLSQDILAELAEIAPGSPLDQARAVRDASTRHAQGSYEVLFSQQDADFPLDERFAVAAK VAKLHQADALAAHYAGFGLADPTTDRLVPALAFARLLTFTPVEATPGALHTLTGAGWSLR GIVTLAQLVAFVSFQSRLLLGLRALNHKPIVSADTPQVAGYWHTTPHTQSGKAAPVRFTR DELHWEPWLADKPLAEFNAEEQAILAKYGHSDSPYFRLLARNQPVLEQRTLTDKGIFYTP GGLPRAERELAATVTSKINGCIYCASVHARKAAQLAKDETAVDTLLAVTPGENLSDGQSP RWQAEIDAAAALSVTPPGLNARHLAALDEQGLDTLAQLDLLQSAAFFAWANRLMLTLGEP WRE >gi|289777623|gb|GG745508.1| GENE 1159 1263299 - 1264285 1142 328 aa, chain - ## HITS:1 COG:SSO1532 KEGG:ns NR:ns ## COG: SSO1532 COG2141 # Protein_GI_number: 15898359 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Sulfolobus solfataricus # 21 248 28 255 341 119 30.0 8e-27 MPKRLGFFTRLLDQGSAQTRYRLAAEQIRHAERLGFDSAWIAQHHFHEQEGGLPSPLVFL AHVAAQTDRIRLGTAIITLPMENPLRVAEDAAVLDLLTDGRLEVGFGSGGTPTSFLPFGL TSEQRGAVFADHLHLIHSAWRGDTLSHPDNRLYPPAPQLAERIWIATFSAEGAIRAGQAG HGLMLSRTQPRPPGEPRLPLDAIQNPIIDAYLAALPDGVAPRILASRTAFVADSHAHALQ VAEPGLRKQATQHRAAGHTIEGDSVTDYLQQLDAHVGDPEHVIASLAQDSVLARATDISF QVHSVEPSHRDTLRSIELIAQHIAPHIR >gi|289777623|gb|GG745508.1| GENE 1160 1264285 - 1265901 1836 538 aa, chain - ## HITS:1 COG:Cgl2382 KEGG:ns NR:ns ## COG: Cgl2382 COG1123 # Protein_GI_number: 19553632 # Func_class: R General function prediction only # Function: ATPase components of various ABC-type transport systems, contain duplicated ATPase # Organism: Corynebacterium glutamicum # 3 524 5 534 547 500 53.0 1e-141 MNVLSVEDLRISYRSRGEWREVVHNVSFSIQRGEMLAFVGESGSGKTTTAQAIIGLLADN ARRDAGRIVLNGEVISDWSAKRLNRLRGVSISLVPQDPGNSLNPVKTIGQQVEEILRLHQ SLSATERRQQVLNLLTKVGLSHPEQRFDQYPHQLSGGMKQRVLIAIAIALQPDLIIADEP TSALDVTVQKRILDLLDILRRESGTAVLFVTHDLALAAERADRIMVFRQGEIQEQGATET IVQRPQHPYTRQLLHDLQDAPLGLTAARHRPLATPAIRVEGISKRFSLGKQALQALDSVS FEVRRGTTHALVGESGSGKTTLARILLGFERADAGQVTIDGIDAGHLSREAQRQLRRKIQ FVYQNPFASLDPRQTLFAIIEEPLKNFERLSASARRLRVETVAARVALAPELLSRTPREL SGGQRQRVAIARALILEPAILVLDEATSALDVTVQAQILALLQQLQQQLGLSYLFITHDL ATVRRIADSVTVLRAGQVVEHGDVDRLFATPQQAYTRELIAAIPQVSPRLAQAHTENA >gi|289777623|gb|GG745508.1| GENE 1161 1265898 - 1266746 1018 282 aa, chain - ## HITS:1 COG:Cgl2383 KEGG:ns NR:ns ## COG: Cgl2383 COG1173 # Protein_GI_number: 19553633 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 11 275 25 288 294 259 56.0 4e-69 MSLVDYAIAVRRRPEWRRVRLQPGLWLAWAVMITALLMALAPQWFTAANPLEGIPGAQRL APQAHYWLGTDQLGRDLWTRVVYGAVHSLSAALIAVAIGLVVGTALGTLAGALTGRVEST IMRLVDVLLAIPSLLLQLTVIILLGFGTVNAAVAVGVAAIASFARLARAEVVRVRHSDYV EAARGSGGTFFAVFWRHILPNSLTAVLAFATLQFGQAMLALATLSFLGYGTPPPVPEWGL LIAEGRNYLSTAWWLTTFPGLAVVAVVLAANRLSRQWSGVRP >gi|289777623|gb|GG745508.1| GENE 1162 1266743 - 1267687 1316 314 aa, chain - ## HITS:1 COG:Cgl2384 KEGG:ns NR:ns ## COG: Cgl2384 COG0601 # Protein_GI_number: 19553634 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 2 306 3 307 313 274 52.0 2e-73 MSAYLLRRFGQGLLVLWAAFTLTFFLLQVLPGDAVLIKFQNPDLGLSPAQIADMRLAYGA DSPLWRQYLHTLLAMLHGDFGYSLQAGLAVSSLIASNLPDTLSLALPAFLLAVALAFALA FASRLPGLRWLSNLLQSLPVLFISLPTFWLGIALIQLFSFQLRWIPVINPGPLEGLILPV IAVALPISAPLAQILMRSMDQVAVQPFVAVARAKGMSETGVLWHHVMGNALLPALNIAGL LLGELIAGALITETVFGRSGLGQLTQQAVNNQDIAVLQAVVMISALGFVLINLLVDLVMP RLDPRLHLQTGGAK >gi|289777623|gb|GG745508.1| GENE 1163 1267698 - 1269320 2350 540 aa, chain - ## HITS:1 COG:Cgl2385 KEGG:ns NR:ns ## COG: Cgl2385 COG0747 # Protein_GI_number: 19553635 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 23 538 42 559 569 459 45.0 1e-129 MHRHFRLPALAALFLSGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQ ITDKLTWQNPKTLEIEPWIAESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTY GLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGFLQGTATIGSGLVSLSTLQRN FEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNSAQQGPANLDGITYIVTPE DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKVYAAPTRGVNDSLSFRPDNSLVADLRV RQALLHATNAKQVVETLFSANYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWK PDADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQVGVALTVKAGDAGSRTLDNL DPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQHFRDDKLNDLLTGISAA VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH >gi|289777623|gb|GG745508.1| GENE 1164 1269478 - 1270488 1360 336 aa, chain - ## HITS:1 COG:STM1567 KEGG:ns NR:ns ## COG: STM1567 COG1064 # Protein_GI_number: 16764911 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 335 1 335 336 569 92.0 1e-162 MKAAVVTHDHQVNVTEKTLRPLEYGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEG IGVVQKVGPGVTSLKPGDRASVAWFFEGCGHCDYCNSGNETLCRSVKNAGYTVDGGMAEE CIVTANYAVKVPDGLDSAAASSITCAGVTTYKAVKVSHIKPGQWIAIYGLGGLGNLALQY AKNVFNAKVIAIDVNDGQLELAASMGADLTINSRNEDAAKVIQEKTGGAHAAVVTAVAKA AFNSAVDAVRAGGRVVAVGLPPEAMSLDIPRLVLDGIEVVGSLVGTRQDLVEAFQFAAEG KVVPKVTLRPLEDINAIFKEMEQGQIRGRMVIDLRS >gi|289777623|gb|GG745508.1| GENE 1165 1270742 - 1271341 844 199 aa, chain + ## HITS:1 COG:aq_1547 KEGG:ns NR:ns ## COG: aq_1547 COG0221 # Protein_GI_number: 15606686 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Aquifex aeolicus # 25 194 5 173 178 145 44.0 3e-35 MHLVKTILTAGLFLSAAAQAQNVLEFPQPENNPEEFYAVTEIPAGGIIKYETDAKTGFII ADRFQSMPVAYPANYGSLTQSLAGDGDPLDVVFYTRAPMAPGTLIKLRPIGVLKMIDGGE KDDKIIAVPASKIDPTYDDIKTITDLPKIEQQRLEAFFRVYKELPEGRKKVELAGFNDAA AAKQEIKSAWEAWKVQNPQ >gi|289777623|gb|GG745508.1| GENE 1166 1271497 - 1272543 1005 348 aa, chain + ## HITS:1 COG:AGl1945_2 KEGG:ns NR:ns ## COG: AGl1945_2 COG0454 # Protein_GI_number: 15891089 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 152 312 4 164 168 167 55.0 2e-41 MPDTPLIQQIRTASRLMVRELGFMSTTLAATHYSPSAVHTLLEVSMRGEMTAAQLVTLLG LEKSSVSRMVSRLLAAGELEERPCAEDARAKSLALTAKGHDTVAKINAWGTRQVVEALDH LDETQQHTVATGLAAYARALAQCRDSALADTAPQISLMTGYQPGMIGRIAQMHGEYYARH HDFGAFFEGKVASGVAEFATRLSSPANQIWLAIREGKIVGSLAIDGEDLGQQEAHLRWFI LDDSCRGSGIGRRLLSEAMTFCDSRQFSAVQLWTFKGLDAARKLYESFGFTLTREWQGEQ WGKVMTEQQFTRSGNTGYGRDALAGGGTWRLRQLVKQAGNLLLPLCLQ >gi|289777623|gb|GG745508.1| GENE 1167 1272487 - 1274202 2064 571 aa, chain - ## HITS:1 COG:AGc1553 KEGG:ns NR:ns ## COG: AGc1553 COG0488 # Protein_GI_number: 15888191 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 500 16 502 504 270 35.0 9e-72 MSTLLTAHALHVETAFGPLFNTLSFTLKKGDRIGLIGHNGCGKSTLLQVLDGTLAPTSGS VSLAGQCLMARVEQHLPEALRSQSLLQAVLAPLPADVREAQRWLAERLLAQMGFTPAVME QQTTTLSGGQHTRLLLARALIRQPDLLLLDEPGNHLDLPTLLWLESFLQTWQGSFVLVSH DNTLLDAVTNASWILRDQTLHSFALPCSAARQALQEQDESAALRHKAEQKEIDRVSASAR RLATWGRVYDNEDLARKAKQMEKQVARLKDEQTELSVGPPWRLSLQGDALPADRLLEMDT LPVAPAPGLPSLFTTGVARLRSGDRVAIMGRNGGGKSSLLRLLWQQMNDASPLPGLRLHP RLHPGYYDQTLEQLPDDASLLDALTPFAPSADTRKRALIAAGFGWARHSQKVSTLSGGER SRLLFVGLSLARYSLLLLDEPTNHLDMEGKAALAQTLRDYPGGVLLVSHDRQLISESCNR FWLIDNAGLTEWHSLEEVYARLQAVAPAPDSRLALQSTPAGADDDEEALLARLIDLEQWL ADDMARKPKHQKPSLQAQWQEEIARLLNQLT >gi|289777623|gb|GG745508.1| GENE 1168 1274316 - 1274399 58 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLYCEMFIVSHALGNCASSSVIGIVLR >gi|289777623|gb|GG745508.1| GENE 1169 1274561 - 1275247 635 228 aa, chain - ## HITS:1 COG:no KEGG:KPN_01849 NR:ns ## KEGG: KPN_01849 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 228 1 228 228 410 94.0 1e-113 MSQQKMVLQPILRLWLGLFSGLLLVSAISAFHGEYWYFGDKQAFYAAKAGEVSVHELYTP AKILFAFIVSTIPPLLWLLLVNRRAPRLLTHILPPVLLLLAGLVFFFLRPDVIPGGETPV YRYGERERYYQTVRWQKPEPGAWRGTRSEYKVYIEYRDPKGHREADNIKNAYTCETHRES RFLTLTTEEDWYPDAYPNILEAPCQAIKDPQAMTEYTRDHARWFPIMF >gi|289777623|gb|GG745508.1| GENE 1170 1275244 - 1275939 607 231 aa, chain - ## HITS:1 COG:no KEGG:KPN_01848 NR:ns ## KEGG: KPN_01848 # Name: not_defined # Def: putative glycosyltransferase # Organism: K.pneumoniae # Pathway: not_defined # 1 231 1 231 231 449 96.0 1e-125 MLKLTPGANKANAILIRIVLFLIGGIAIITGMCLFSGDMWMLTPRAEQYQPATGDLVDVV IYEPSKFFFALLYVFIITLVWLLAVRKIPWRPIQHPILPLMVLIAAGIFIFLHPEVTPGR DASIQYGKHNTYYASIFWMKTRSGSHSAKQSKYETFVEAKDPRWLIDRNNLGRAWRCEVE RHSQFYTLSFNEGWFPNINPQVLANQCSQIADLDTVSEDELLVTKTIRSRK >gi|289777623|gb|GG745508.1| GENE 1171 1276123 - 1277820 2542 565 aa, chain - ## HITS:1 COG:STM1566 KEGG:ns NR:ns ## COG: STM1566 COG0281 # Protein_GI_number: 16764910 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Salmonella typhimurium LT2 # 1 565 1 565 565 1022 88.0 0 MQFTHKKNRSLYIPYAGPVLLEFPLLNKGSAFSLEERSNFNLLGLLPEVVETIEEQAERA WIQYQGFKTEIDKHIYLRNIQDTNETLFYRLIGNHLEEMMPVIYTPTVGAACERFSEIYR RARGVFISYQNRHNLDDILQNVPNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT TCGGISPAYTLPIVLDVGTNNQQLLDDPLYMGWRHPRITDDEYYQFVDDVIQAIKARWPD VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVF LGAGSAGCGIAEQIIAQIVREGVSEEEARQRVFMVDRFGLLTDGMPNLLPFQNKLVQKRE HLQGWDTTNDVLSLLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPT SRVEATPQNILSWTDGEALVATGSPFAPVTLKGKQYAIAQCNNSYIFPGIGLGVIASGAS RVTDEMLMAASETLAKHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVKTS AEALLQAISDNFWLPEYRNYRRTSI >gi|289777623|gb|GG745508.1| GENE 1172 1278001 - 1278141 188 46 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2457 NR:ns ## KEGG: Kvar_2457 # Name: not_defined # Def: 30S ribosomal subunit S22 # Organism: K.variicola # Pathway: Ribosome [PATH:kva03010] # 1 46 1 46 46 67 100.0 1e-10 MKSNHQARHLLGLNYKLSQQKKVVLEGDEETTLNHIHATGRKRRGG >gi|289777623|gb|GG745508.1| GENE 1173 1278319 - 1279170 893 283 aa, chain - ## HITS:1 COG:VCA1049 KEGG:ns NR:ns ## COG: VCA1049 COG0491 # Protein_GI_number: 15601800 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Vibrio cholerae # 1 283 9 292 292 281 51.0 7e-76 MKLSALAVATALFSGSIFAAPLTLQTYNPQEKGIFAVNSTLVSGPHEAVLFDAQFSVKDG EKLVDMIKKNGKPLTRIVITSGDPDFYFGLEPLMKAFPQAEVVATPEVVKHIEATKAAKL AYWGPQMKDGAPTQVYVPQALKANSFTIDGEKVTIMQPHDYAAFVWIRANKTILGGTGVA WGMHLWTADTQTSASRQQWRHTLDQMIALHPQRVIPGHYLGTPPEGDSAVRFTKTYLQQF EQALKTHQDSAGVIKAMETQWPGLAETSSLELSAKVNTGEMKW >gi|289777623|gb|GG745508.1| GENE 1174 1279286 - 1280179 1048 297 aa, chain + ## HITS:1 COG:YPO0799 KEGG:ns NR:ns ## COG: YPO0799 COG0583 # Protein_GI_number: 16121111 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 286 1 287 302 230 43.0 3e-60 MDRVIAAQVYLRICELGSLSAAARALGMSRPMVSRYLEQMENWAGARLIHRSTRRLTLTP AGEKVLLKTRGLTRIADEIAGERQRADPSGTLRVACAHFTAMQLISPLLPDFLARYPQLR LELDINNHPVSLIGERIDVAIRITDNPEPGAIARRLGLCRSLLCAAPRWLQQHGPLATLD DLQQHNCLLYSHFAGQRWQFSDAQGQEASVAVSGNLSAGISSLLLEAAVAGCGIAMLPEL EARSALASGALEVVLPDWTPKALSVYGIYLSRDYQPDGLPLFLDALQRRLGEIAAVA >gi|289777623|gb|GG745508.1| GENE 1175 1280247 - 1280492 462 81 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2460 NR:ns ## KEGG: Kvar_2460 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 81 1 81 81 117 100.0 2e-25 MSNEIPLKFYDIVDEYETEAASPVKETERDALARYFQLLIERLMNNEEIDEEAQQEMARE AAIDERRIDDIANFLNQWGNE >gi|289777623|gb|GG745508.1| GENE 1176 1280658 - 1281572 1111 304 aa, chain - ## HITS:1 COG:AGl509 KEGG:ns NR:ns ## COG: AGl509 COG1028 # Protein_GI_number: 15890360 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 303 21 307 308 360 65.0 1e-99 MQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGTGRLAGK KALITGGDSGIGRAVAIAFAREGADVAISYLPEEQEDADEVIALIKAEGRTAVALPGDIR SESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEELTTEDFDATFKTNVYAPFWITRA ALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVAPG PYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSDGG DGVV >gi|289777623|gb|GG745508.1| GENE 1177 1282228 - 1282413 82 61 aa, chain + ## HITS:1 COG:STM1513 KEGG:ns NR:ns ## COG: STM1513 COG3729 # Protein_GI_number: 16764858 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 60 1 60 60 65 90.0 3e-11 MAEHRGGSGNFAEDREKASEAGRKGGQHSGGNFKNDPERASEAGKKGGKNSHGGGRKAGD S >gi|289777623|gb|GG745508.1| GENE 1178 1282617 - 1282832 137 71 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2463 NR:ns ## KEGG: Kvar_2463 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 71 1 71 71 121 100.0 9e-27 MKLTPALIKRCHLVAAVMWVILAIPSLIWWKNSVLWVILISIYANIVGHLSGYSAARADQ AAEENEDPTSK >gi|289777623|gb|GG745508.1| GENE 1179 1282856 - 1283362 378 168 aa, chain + ## HITS:1 COG:ECs1653 KEGG:ns NR:ns ## COG: ECs1653 COG3685 # Protein_GI_number: 15830907 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 196 56.0 2e-50 MTDIENYHNWLRDAHAMEKQAEVILITATRRSENYPPLRTRLEQHLYETRRQLSSLQDII ARNHISRSALQDAMSRVAALGQSIGMMLPGDEVIKVIITAYVFAQFEVACYTALLTAAKR VGDHHAIHALEAMLAEERGMADWLLHHQPTIVGQFLHRADLPGVEAGK >gi|289777623|gb|GG745508.1| GENE 1180 1283617 - 1285242 1357 541 aa, chain + ## HITS:1 COG:SMb20099 KEGG:ns NR:ns ## COG: SMb20099 COG0366 # Protein_GI_number: 16263847 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Sinorhizobium meliloti # 1 536 1 538 544 396 41.0 1e-110 MQREQWFHRAVIYQVDSSLFYDANGDGYGDLAGIRQKLHYIRSLGATVLWLTPFYLTPLQ DDGYDISDHLQPDPRFGTIADVIELIARARELGLRVIVELVIQHTSAQHPWFQAARRDPR SPWRPYYLWADRPPEKDDPPMFPGVEESVWRWDEQAGQYYRHMFYRHEPDLNLAHPPVIA EIENIITFWLQAGVSGFRLDAASHLVKQAGKGDEARGYPLLNHLRQVVQRLNPEAILLGE VDVAVEDYRHYFGHGDRLQMVLNFWLNKYLYLSLAQQRAAPVVKALQAMVIPPDGCCFVN WLRNHDELDLEGIGERNKRQVIRTFAPDKSMSVYQRGVRRRLAPMLDGDTRRMALAHAIL LALPGVPVMRYGDEIGMGDDLSLPERYAVRTPMQWSAAPNGGFSRAARDDLPVKPIASGR WRYQRINVETALRHPRSLLNRVRNMVLARAEYTEPGSIAFAILAVKPAAVLGLCYRSESR EVLMLANCSQQAVEVLLPPLAEGYWSPILEDKLYQDGLHGGKDARLALSGYGYRWFSRSL D >gi|289777623|gb|GG745508.1| GENE 1181 1285239 - 1286234 972 331 aa, chain - ## HITS:1 COG:SMb20076 KEGG:ns NR:ns ## COG: SMb20076 COG1028 # Protein_GI_number: 16263824 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Sinorhizobium meliloti # 2 320 8 317 338 121 30.0 2e-27 MSVMVITGGTAGAGKATALRFARAGYHVALIARDETGLQEAQQACERFGIKTLAISADVA DAGALQRAAAEVEATLGAIDVWINNAMTTVLAPFRQMSEEEFRRVTEVTYLGYVNGTRAA LEVMAPRDRGVIIQAGSALAWRSIPLQSAYCGAKAAIRGFTDAVRTELMHEKSHIQLTMV QLPGMNTAQFGWARNKMDQAMQPVPPVYQPEVAAEAIYSVIQRPVNELWVGKSTIQSILG QVFFPRLLDRLMVKKAWEGQFTGQPKPAEHQDDLFTPVRGNHPGHGPFNDGARRKAMTIS ADLPGKVAAGVGVAVATMALRALFRRSGKRR >gi|289777623|gb|GG745508.1| GENE 1182 1286447 - 1286539 121 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLNMLSVEKEEDDATRAPESGDKQPERDK >gi|289777623|gb|GG745508.1| GENE 1183 1286548 - 1286994 411 148 aa, chain - ## HITS:1 COG:SMb21362 KEGG:ns NR:ns ## COG: SMb21362 COG2323 # Protein_GI_number: 16264686 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Sinorhizobium meliloti # 1 145 1 145 146 123 44.0 1e-28 MEMVLRAAAIYFILLIIFKIAGRRTLMQLTNFDLILLLIISEATQQAMLSTDYSVTGSML TIVTLVGVDILFGYIKKRFSQAENFIDGSPVIVVENGAVIDEKIKLVNISVDDILLAARQ HHGIYELKAIKFAILERNGQISIIPEKE >gi|289777623|gb|GG745508.1| GENE 1184 1287003 - 1287506 372 167 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2470 NR:ns ## KEGG: Kvar_2470 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 167 1 167 167 332 100.0 3e-90 MIKNQQDCPIVDENERALRFEYRFRRYGIIVLSLIILTALSGLWSSGYFSEAHRESAAGE LSVDYQRYARLMSETEVNIQIKPDGGSEKIISFTAPFLSRYQVGDIRPQPDKMYSAEGKL YLVYQQAANRSPMSVWLSITPKTAGNISLQAAVNDRAPVTWNQFVYP >gi|289777623|gb|GG745508.1| GENE 1185 1287652 - 1288056 376 134 aa, chain + ## HITS:1 COG:ydeI KEGG:ns NR:ns ## COG: ydeI COG3111 # Protein_GI_number: 16129495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 130 1 130 130 147 56.0 7e-36 MKKLALAMACVLAVGIAQADDKGGFSQDAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHD GATISLRGNVLTRQDNDRYQFRDKSGTITAIIPAAAFNEQHVEPDDLVSINGSLDRKMTP PVVRVDRLLKQSPK >gi|289777623|gb|GG745508.1| GENE 1186 1288072 - 1288218 93 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNTSQPQGEQGGKHPAREAPAEHGEVPRKRDDSKDDKTDPYQPHDGR >gi|289777623|gb|GG745508.1| GENE 1187 1288332 - 1288763 788 143 aa, chain + ## HITS:1 COG:osmC KEGG:ns NR:ns ## COG: osmC COG1764 # Protein_GI_number: 16129441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli K12 # 1 141 1 141 143 217 78.0 5e-57 MAIHKKGLAHWEGDLKHGKGTVSTESGALSQQPYGFNTRFEGVKGTNPEELIGAAHAACF SMALSLMLSEEGYTATSIDTTAVVTLNKTDGGFAITDIALQSQIVLPDVAPAAFDEIIQK AKAGCPVSQVLKANITLDYQLNP >gi|289777623|gb|GG745508.1| GENE 1188 1288867 - 1289736 1216 289 aa, chain + ## HITS:1 COG:PA4734 KEGG:ns NR:ns ## COG: PA4734 COG3662 # Protein_GI_number: 15599928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 286 1 286 293 330 58.0 1e-90 MIGIRGMIEAQVLGLTGMALKEIDFEQPKGEPGLFGPQSAIWQVHGDFTSMLCGGISALL LQMLHPLALAGVWDHSRFREDIFGRLRRTSQFISATTFATTPDAERLIAKVQEIHQRIGG VDKDGTPYQASDPALLTWVHVAECSRFMASHLRYKRTVVSAERQEDYFRESAEIARRLGA QDIPQTPQEVADYLEAMRPQLRCDERTREVAEVLLSTRLPGRLSQPVGQVMMRAGIDLLP EWAQEMLGLSLTPLQRNTTRLLVHGVARVLRASVRNGAWHCAMRRMQVE >gi|289777623|gb|GG745508.1| GENE 1189 1289740 - 1290426 594 228 aa, chain - ## HITS:1 COG:RSp0186 KEGG:ns NR:ns ## COG: RSp0186 COG0834 # Protein_GI_number: 17548407 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Ralstonia solanacearum # 9 192 17 200 245 150 46.0 2e-36 MSENTSSRLRFAINLGNAVLAHLGETGEPAGLTVELSHRLATRWGVTAEFVPYPAAGKVV ADAGGDHWDIAFLAIDPAREATLRFTPPYITIQGTALVRAGSPCQSVADMDRPATTINVG QNAAYDLWLTRHLQHASLNRLPSSQEAIDAFLAGEGDMVAGIRQPLEATARQHAGVRVLA DNFTEIQQAICVARADVAGFNAVNDALSEWRADGSLEALIARQLGKAE >gi|289777623|gb|GG745508.1| GENE 1190 1290647 - 1291600 1239 317 aa, chain + ## HITS:1 COG:RSc3077 KEGG:ns NR:ns ## COG: RSc3077 COG0053 # Protein_GI_number: 17547796 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Ralstonia solanacearum # 15 299 14 301 392 256 55.0 3e-68 MTQHNFENDNKYHERSVQARKSTLISVVVNIFLSVFQVVVGIFSGSQGLIADGMHSFSDL VADGVVLVANKKSRRPSDHDHHYGHWRYENGASLILGAILVLVGVGMLWSAAGHLAQPQT IPAVHSVALWMALVALAVKEGLFRYMLAVATRLNSSLLIANAWHARSDAASSLVVALGII GNLAGFAWFDPLAALAVGLLITRMGYRFAATALHDLMDRAVDEETQRAIARTLQATPGVA GLHDLKTRKAGDLVLVDVHLEVAGEMSVAEGHQIARQARERVLAQHPVLNVMVHLDPSDA ASALGGADKSGLAHPVS >gi|289777623|gb|GG745508.1| GENE 1191 1291832 - 1292749 1423 305 aa, chain + ## HITS:1 COG:STM1527 KEGG:ns NR:ns ## COG: STM1527 COG3781 # Protein_GI_number: 16764872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 305 12 315 315 340 55.0 3e-93 MIIRPEQHWFLRLFDWHGSVLSKIIFRLLLNVLMSIIAIISYQWYEQLGIHLTVAPFSLL GIAIAIFLGFRNSASYSRFVEARNLWGTVLIAERTLVRQLRNILPAEHDVHRRIVSYLVA FSWSLKHQLRKTDPTADLRRLLPEDKVAEILASSMPTNRILLLVGNEIGQLREAGKLSDI TYGLMDNKLDELAHVLGGCERLATTPVPFAYTLILQRTVYLFCTLLPFALVGDLHYMTPF VSVFISYTFLSWDSLAEELEDPFGTAANDLPLNAMCNTIERNLLDMTGQHPLPETLRPDR YFNLT >gi|289777623|gb|GG745508.1| GENE 1192 1293071 - 1295371 2745 766 aa, chain + ## HITS:1 COG:CC1243 KEGG:ns NR:ns ## COG: CC1243 COG0243 # Protein_GI_number: 16125492 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Caulobacter vibrioides # 8 752 6 754 762 873 58.0 0 MTNKRRAVPGVHPYDGPAGGWGALKATAIAVRTQMDAFEAPATLLRTNQPDGFDCPGCAW PDKEHKSTFQFCENGAKAVTWEATTKRVTPAFLAANTVTSLLAKSDFELEGYGRLTHPLV YDRASDTLRPVAWEQAFARIGEILRGLQPDEVEFYTSGRASNEAAWLFQLYAREYGTNNF PDCSNMCHESTSVGLPQSIGIGKGTVSLDDFDQTELVISIGHNPGTNHPRMMGTLHELSR RGVPIIVFNPLRERALERFADPQNVMEMATRRSTPIASTYYQVRAGGDAAALKGIAKALL QLEEEQGNVLDHAFITQHTQGFSAFAEDLHATRWQDIEQESGLTRESLTQVAVAYAKSRA TIVTYGMGITQHNKGTSNVRLIADLLLMRGNIGKPGAGICPLRGHSNVQGNRTVGISEKP SAAFLDSLQRVMGITPPRHHGHDAVKALEAMIAGDAKALICLGGNFAVAMPDHERAFPAM RGLELSVHVGTKLNRSHLLTAKETFILPCLGRTELDLQASGRQSITVEDSMSMVHASSGK LKPASPTLRSEPAIVAGLAKATLPASKVDWLYLVEDYDRIRDLIEQTIPGFEEYNQRIRH PGGFRMPLPPTERIWPTATGKAMFSVFKGVHENVVVEGEDVMRLVTLRSHDQYNTTIYAM DDRYRGVFGRRDVLFMNEQDMAAQGLEHGDRVDIHTALPDSELTLEDITVVAYGIAPGTV GAYYPEANVLVPLNYLDEESGTPSYKSVPVRLTLRSKEIRPLAGVR >gi|289777623|gb|GG745508.1| GENE 1193 1295520 - 1296401 1088 293 aa, chain + ## HITS:1 COG:PA5179 KEGG:ns NR:ns ## COG: PA5179 COG0583 # Protein_GI_number: 15600372 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 289 1 286 293 301 56.0 1e-81 MDIKQLKYLIALDQTRHFGQAAAACHITQPTLSMRIRNLEEELNLTLIQRGQRFEGFTPE GERILAWARAVLAAHDGLAAEAAICRGQMVGQLRVGMVPLASLNPMQLIKPLAEKYPALQ FSLLSMTSEQIIDGVSRNQLDLGICYLQHLDQRLFKVARLPQTRMGLLHDKRHFDFSGGT PGWEALATLPLGFLTKGMYYRESIEISFKAKGLTPKYVFESDSTFQIIQAVQAGICCAIM PLNNGLEALSDNLEILPIAETQVDSQLALIMRQQEPVSTLAEKCFAEAQGIFG >gi|289777623|gb|GG745508.1| GENE 1194 1296422 - 1297828 1830 468 aa, chain - ## HITS:1 COG:SSO3143 KEGG:ns NR:ns ## COG: SSO3143 COG0477 # Protein_GI_number: 15899846 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sulfolobus solfataricus # 21 468 2 446 448 216 31.0 7e-56 MSTTQVLGGAPYASPGQPHASLTGRIDALPASFGLWSFITLLSLGGFFELYDLFQTGYIS AGLLADGIFHTGQAGIFGIADQAAFASATFMGLFIGASLLAPLADRLGRRLTFMVALAWY GLFSLLMATQSSAEGVIFFRFLVGIGLGIELVTIDTYLSEWMPTHLRNKAFAFAFFIQFL SVPAVALMSWMLVPTTLFGLSGWRWVIIFGALFSLAIWFIRKKLPESARWLESKGRHDDA HAVMSEMEARCGVTPSPKHAHAAQSVVKRGTFREIWAPQYRQRTLMLMVMNFFQAIGFFG FGNWLPALLSGQGASITHSLLYAFFITLAYPLGCLFCTRFVHRFENKWQIVLSALMTVIF GTLFALQNSPILLVICGFMITWSNAWLTISYHAYQAEVFPTHIRARAVGFCYSFSRLSTA VTSILIGIILQYAGTPGVISFIVVSMLMVMLSVGIFGPRTRGIRLENI >gi|289777623|gb|GG745508.1| GENE 1195 1298091 - 1299152 955 353 aa, chain + ## HITS:1 COG:PA4539 KEGG:ns NR:ns ## COG: PA4539 COG1485 # Protein_GI_number: 15599735 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pseudomonas aeruginosa # 24 349 23 358 363 254 44.0 2e-67 MLKEGCMASYSDQPEMATEFRFTRVMAEQAARARLTLDDDQLSLIARLDALGQQLLSAAG TPQGLYVWGRTGRGKSFILDHFFASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQAVMR QMTSGCRLLCFDEFHLHDPGDAMLIKVLLEHLFQRGIVLLATSNYPPEMLLPNPLYHDRF LPSIALIRAHLAVVALNGEEDYRQRHLSVDNAFCSGRMWVNPNTQQRQLYDLPSLPAEPV SLTVGYRTLLAATASSTLLHFTFAQLCQAATAVMDYLTLSESYTVWLLDEVPPLATVGPA AQQRFINVIDVLYEKQIRLLLVTCCDLETLVAGVELEDIQRTRSRLQQLPRAV >gi|289777623|gb|GG745508.1| GENE 1196 1299187 - 1301364 2748 725 aa, chain - ## HITS:1 COG:STM4106 KEGG:ns NR:ns ## COG: STM4106 COG0376 # Protein_GI_number: 16767372 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Salmonella typhimurium LT2 # 1 725 1 725 726 1189 82.0 0 MSTSNDPSNNASAGKCPFHAETPKQSAGSGTGNRDWWPNQLRVDLLNQHSSRSNPLGEDF NYREEFKKLDYSALKADLRALLTDSQEWWPADWGSYIGLFIRMAWHGAGTYRTVDGRGGA GRGQQRFAPLNSWPDNVSLDKARRLLWPVKQKYGQKISWADLYMLAGNVALENAGFRTFG FGAGREDVWEPDLDVDWGDEKEWLAHRHPESLAKQAIGATEMGLIYVNPEGPNASGEPLS AAAAIRATFGNMAMDDEEIVALIAGGHTLGKTHGAAETSHVGAEPEAAPLEAQGLGWHSS YGSGAGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAKDAPEIIP DPFNPGKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS RYLGPEVPKEDLIWQDPLPAATHQPSAEDIASLKTAIAGAGLSVSELVSVAWASASTFRG GDKRGGANGARLALAPQKDWPVNAIASRVLPTLQAIQRASGKASLADIIVLAGVVGVEQA AAAAGVSVNVPFTPGRVDALPEQTDVESFDLLQPLADGFRNYRRIEGGVSTETLLIDKAQ QLTLTAPEMTVLVGGLRVLGANYDGSKHGVFTDRVGVLSNDFFVNLLDMATVWKAADDHA ELFTGSDRKTGEAKYSATRVDLVFGSNSLLRALAEVYACADGQQKLVHDFVAAWTKVMNL DRFDL >gi|289777623|gb|GG745508.1| GENE 1197 1301803 - 1302435 552 210 aa, chain + ## HITS:1 COG:mll8240 KEGG:ns NR:ns ## COG: mll8240 COG1280 # Protein_GI_number: 13476807 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Mesorhizobium loti # 1 210 1 210 210 238 64.0 4e-63 MPEFASLMAFAAVALGLVLTPGPNMMYLTSRSICQGKRAGFISLAGVAVGFFFYMLCAAF GITALVFAVPYAYDALRLCGVAYLLYLAWQAIKPGGRPIFAVRDLPADSGRKLFLMGFLT SLANPKVAILYLSLLPQFITPGLGSVLSQSLILGCTQVIISVAVNGMIILLAGQVALFLG RRPGWQQFQRWLMATVLAGMAVKIAFEARK >gi|289777623|gb|GG745508.1| GENE 1198 1302657 - 1304567 2720 636 aa, chain + ## HITS:1 COG:STM1910 KEGG:ns NR:ns ## COG: STM1910 COG0768 # Protein_GI_number: 16765252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 9 633 4 622 623 937 73.0 0 MPLLRDEIRDHSAEEMLFIRRAAIAFLLVVVCFGVLIANLYHLQVEQHDFYQTRSNQNDI KMLPIAPSRGLIFDRNGIPLVQNITLYRLQVIPSKIPDMAALLQSLTPIVDLTPDDIASF RDDMHHNSRYKAVTLKSDLSDVEVARFAVNEFRFPGVTVESYQQREYPYGAELAHVVGYV SKINDNDLQRLAKDGEEENYAADHNIGKQGIEGYYEKALHGTTGYQEVEVDNHGRVVRLL KEVPPVAGKNLYLTLDLHLQQYIESVLKGQRAAVVVVDPRDGGVLAMVSSPSYDPNPFVK GIGYQAYKSLLDNPDRPLINRVTQGLYPPASTVKPYMALSALSAGVITPNTTFFGAPTWT LPGTQRRYRDWLKTGHGMLNVTKAIEESADTFFYQVAFEMGIDRIHEWLSKFGYGQSTGI DLNEEYAGVLPSREWKQRVHKKPWYQGDTISVGIGQGYWIATPIQMVKALTTLLNNGKVQ DPHLLYSMKQGDHVERYQQPANLPQVGDPKSPYWGIVRNGMYGMANLPNGTGYKLFHTAP YQIAAKSGTSQVFSLKQNQTYNAKMIPVRLRDHIFYTLFAPYQHPKVAMALILENGGGDG VVAGPTARAILDHIFVPQQASSAAADVPQRDSADAQ >gi|289777623|gb|GG745508.1| GENE 1199 1304679 - 1305416 882 245 aa, chain + ## HITS:1 COG:RSc0213 KEGG:ns NR:ns ## COG: RSc0213 COG0518 # Protein_GI_number: 17544932 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Ralstonia solanacearum # 1 237 1 237 238 252 56.0 4e-67 MTRNRLLLVQTGTPPAAIREEHGDLPHWFRTLLAPWQAQLTAVRVFEDEPLPAPDRQTVA VLTGSWAMVSDRLAWSERTADWIRQAVAIGMPLFGVCYGHQLMAHALGGEVAYHPAGRES GSKTIALSPWGVDDPLLSGLPATFPAHLSHLQTVTRLPEGATVLAASSHDPHQIVRYGPQ AVSTQFHPEFTAPIARSLIRYREAVLQAEGIDPQQLHDEVQESPQAAAILTRFVSDFLTP DAPGH >gi|289777623|gb|GG745508.1| GENE 1200 1305413 - 1307698 1953 761 aa, chain - ## HITS:1 COG:PA1973 KEGG:ns NR:ns ## COG: PA1973 COG1025 # Protein_GI_number: 15597169 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Pseudomonas aeruginosa # 5 701 11 704 775 229 34.0 2e-59 MTLATRTVTLPGGLQATLVHQPQADRAAALVRVAAGSHHEPSCFPGLAHLLEHLLFYGGE RYRKDERLMSWVQRQAGDVNATTLARHSAFFFEVAAEGLADGVMRLQEMLQAPLLLRDDI QREVAVIDAENGLIQQHELSRREAAVRHAAIAPAAFRRFQVGDAGSLGEDFLALQAALRD FHYSHYVARRMQLWLQGPQSLEVLGELATRFATGLAPGEAPPPAPPLSLGEPPQLQLAVS SLPALWRCPLIALSDNVTLLREFLLDEAPGSLMAGLRQRGMAEDVALNWLYQDQHFGWLA LIFASDRPEQVDRQITHWLQALQQTTPEQQQHYYQLSRRRFQALSPLDQLRQRAFGFAPG APPTGFADFCAALLAAPTVSLACQTQPPGATVATQGFSLPLSRWSPRPVSDPALAFAFYP QTAGDLKAESPAEAAPLRHLPSPGEPPTLLLRPPFYCSPTPAGGLARGEQLRSLLAALRH AGGHGEWHLFDGSWQLILQLPASGQRPEAILQAIVRQLALPVAPLPPPPESIAIRHLIAQ LPERLGTSAHQEGWLAALTGGSAEDAQWVARQLSRLTVPVNPPMPAPAPCRRGVERLAFP GEGAALLVFIPLPEGASLAALRVLAQFCEPPFFQRLRVEQQIGYVVSCRYQRVADRDGLL MALQSPERRPGELLRCCKTFLRQLDPMDEATFRLLQQRLAAQARSRVPPKVRALDALRQE YNLPGVTPQAADALRVEEVVALWREMTRRRRRWRVLFTTGS >gi|289777623|gb|GG745508.1| GENE 1201 1307698 - 1308840 1290 380 aa, chain - ## HITS:1 COG:PA1989 KEGG:ns NR:ns ## COG: PA1989 COG0535 # Protein_GI_number: 15597185 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Pseudomonas aeruginosa # 7 376 11 380 381 570 71.0 1e-162 MSQNKPAVNPPLWLLAELTYRCPLQCPYCSNPLDFARQEKELTTEQWIEVFRQARAMGSV QLGFSGGEPLTRKDLPELIRAARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQA SDEVLNAALAGNKKAFQQKLAMARAVKARDYPMVLNFVLHRHNIDQLDKIIELCIELEAD DVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYD WMPEPCRSCDEKEKDFGGCRCQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKV SQLQFRNRTRSQLIYKTREL >gi|289777623|gb|GG745508.1| GENE 1202 1308827 - 1309105 359 92 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2488 NR:ns ## KEGG: Kvar_2488 # Name: not_defined # Def: coenzyme PQQ synthesis D # Organism: K.variicola # Pathway: not_defined # 1 92 1 92 92 178 100.0 8e-44 MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLN ERFPEAGGVDDDVVEFLQIACQQKWITCREPE >gi|289777623|gb|GG745508.1| GENE 1203 1309108 - 1309863 956 251 aa, chain - ## HITS:1 COG:PA1987 KEGG:ns NR:ns ## COG: PA1987 COG5424 # Protein_GI_number: 15597183 # Func_class: H Coenzyme transport and metabolism # Function: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C # Organism: Pseudomonas aeruginosa # 12 246 11 245 250 362 74.0 1e-100 MLITDTLSPQAFEEALRAKGAFYHIHHPYHIAMHNGEATREQIQGWVANRFYYQTTIPLK DAAIMANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPG VRFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIKEEGYFYFRSRL SQANRDVEHGLALAKTYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVT DKAAWHTTRLV >gi|289777623|gb|GG745508.1| GENE 1204 1309857 - 1310783 1283 308 aa, chain - ## HITS:1 COG:PA1986 KEGG:ns NR:ns ## COG: PA1986 COG1235 # Protein_GI_number: 15597182 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Pseudomonas aeruginosa # 1 303 1 304 304 402 62.0 1e-112 MFIKVLGSAAGGGFPQWNCNCANCQGLRNGTIQASARTQSSIIVSDNGKEWVLCNASPDI SQQIAHTPELNKPGVLRGTSIGGIILTDSQIDHTTGLLSLREGCPHQVWCTPEVHEDLST GFPVFTMLRHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSPYRDRPLPGHN VALFIENRRNGQTLFYAPGLGEPDEALLPWLQKADCLLIDGTVWQDDELQAAGVGRNTGR DMGHLALSDEHGMMALLASLPAKRKILIHINNTNPILNEQSPQRQALTQQGIEVSWDGMA ITLQDTAC >gi|289777623|gb|GG745508.1| GENE 1205 1310838 - 1310909 118 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWKKPAFIDLRLGLEVTLYISNR >gi|289777623|gb|GG745508.1| GENE 1206 1311046 - 1312065 1056 339 aa, chain - ## HITS:1 COG:BMEII0626 KEGG:ns NR:ns ## COG: BMEII0626 COG2355 # Protein_GI_number: 17988971 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Brucella melitensis # 1 337 7 344 346 311 48.0 1e-84 MAIFDGHNDLLLNLWLHHREDPVSAFFAGIENGHLDYPRIRQGGLAGGLFALFVPPQEYI ARVAPQYASEAWDPRVILWQQLAILKAICAHDASRARLCLSAADIERCRQDNALAMVAHI EGAGGFDAQGEDLQAFYRAGVRSIGPFWNIANRFGCGVTGAFPGSPDSGPGLTCEGIALI AQANALKMQIDVSHMNEQAFWDTAHHSTAPLVATHSNAHALCPQPRNLTDRQLRAIRDSG GVVGVNFGNAFLRADGRRDSDTPITTIVRHIDYLINIMGEDHVALGSDFDGITLPDELGD VAGLPRLINALRDNGYDQLVLDKLLWNNWLRVLKKVWQQ >gi|289777623|gb|GG745508.1| GENE 1207 1312309 - 1313301 1094 330 aa, chain + ## HITS:1 COG:SMb20216 KEGG:ns NR:ns ## COG: SMb20216 COG0596 # Protein_GI_number: 16263957 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Sinorhizobium meliloti # 33 330 51 348 348 409 68.0 1e-114 MNRLSLIRYTSAAALGLSTLWSAAVCAAEDAGAFDKIHQIRAGDLNIGYVDIGPRDGQPV ILLHGWPYDIQSYAQVAPALAQKGYRVIVPYLRGYGTTRFLSASTPRNGQPSAMAADIVH LMDALNIRQADLAGFDWGARTADIVAALWPQRVKSLVSVSGYLISSQQIGEKPLPPQAEL SWWYQFYFATPRGEAGYRQNTHDFAKFIWHQASPQWKFSDATFARTARALDNPDHVAITI SNYRWRLGLEKGEAKYAGYEQRLAALPPITVPTITLEGANNGAPHPAPASYRAKFTGKYE HRDLQGAVGHNPPQEDPADFVQAVVDADRL >gi|289777623|gb|GG745508.1| GENE 1208 1313388 - 1314128 955 246 aa, chain + ## HITS:1 COG:PA4101 KEGG:ns NR:ns ## COG: PA4101 COG0745 # Protein_GI_number: 15599296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 245 1 245 246 333 71.0 1e-91 MERIDHILVVDDDRDIRELIVDYLEKSGYRASGAANGKAMWSVLKNHQIDLIVLDIMMPG EDGLTLCRQLRANPQQDIPVLMLTARTDDSDRILGLEMGADDYLIKPFVARELLARIKAI LRRTRALPPNLQITEAGRLIAFGDWLLDTAARHLLDDSGAIVALSGAEYRLLRVFLDHPQ RVLNRDQLLNLTQGRDAELFERSIDLLVSRLRQRLREDAREPAYIKTVRSEGYVLSVPVS IRERHE >gi|289777623|gb|GG745508.1| GENE 1209 1314161 - 1315468 1524 435 aa, chain + ## HITS:1 COG:SMb20218 KEGG:ns NR:ns ## COG: SMb20218 COG0642 # Protein_GI_number: 16263959 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Sinorhizobium meliloti # 3 422 24 442 454 379 49.0 1e-105 MALLFLALLLANTLTLSLLFYERMSSARSVMLGNLASDVATSVAILDRLPAAERPQWLPK LARGNYRYLLGSGERGDYPDSWRARDAARSLQEALSAQYPVSIVTISGPRQHIQAHITLH DGAPLTLDLWPKLPAIARWLPVVLIAQFVLLLACAWYAVRQVLLPITRFTRAVDALEPAS DTAGTMAEQGPEEVRRAARAFNAMQARIHDHLQERARILAAISHDLQTPITRMKLRVEMA DQPELRDKLLQDLDNMTRLVREGIAFARTSQPLAEARQRLNLDAFLDTIVCDYADVGRPV RFCPEETAGVVWIPPQALRRVMTNLIDNGLKFGTTVTVTLTRDAAGDITLHVLDEGPGIP EASLQAVLQPFYRLEDSRNRDTGGTGLGLAIAAQLVSQMNGALRLANRPQGGLDASVRLA AAGLYPAVSPAQTDN >gi|289777623|gb|GG745508.1| GENE 1210 1315571 - 1316761 1502 396 aa, chain + ## HITS:1 COG:SMb20213_2 KEGG:ns NR:ns ## COG: SMb20213_2 COG0526 # Protein_GI_number: 16263954 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Sinorhizobium meliloti # 254 394 32 172 346 190 60.0 4e-48 MSIFIAFLGGMLTLLSPCTLPVIPLLFASVRGRRGQLAIMLAGMALMFGAVSWLVTVASG WVVNLTLAGRGLALAFFALVGLSLLSQRVAQRLTSPLVALGNQLNNASSRQRGWIGSLLA GLAVGLLWAPCAGPVLGAILSLGFVHPGQATTGGLLLAYGSGGALMLFLLGWCGAALIAR LRRGLAFGERLRRLAGVAMLASVALIASGGDRYLQSAGGWSQALEQRLAARLPQPEQKTI LQPIAAPQPSSAMPSLAGGSAWLNSPALTPERLKGKVVLVDFWTRECINCQHTLPYVRDW ANKYRAAGLVVIGVHTPEYPWERSLPLLRQAVKDGRITYPVVADNEYAIWNAFGNQYWPA HYIFDARGQLRYTAFGEGDYARQEQVIQQLLQESKA >gi|289777623|gb|GG745508.1| GENE 1211 1317941 - 1318822 1096 293 aa, chain - ## HITS:1 COG:mll7406 KEGG:ns NR:ns ## COG: mll7406 COG0583 # Protein_GI_number: 13476159 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 8 286 6 287 305 232 49.0 8e-61 MEKRLPGLDLDALRSFVTGMECGSFAQAALRLSRSTSAVSAQLKKLESQCGAALVAKQGR HLVLTAEGEKLMSYARRLLALNDETLRALQGERLTGEIHLGMQEDFGESLMPGILGQFKR HHPQVRIVARVDRNGPLRQALAEEVLDLALLWQTEDQGPGMGRCPLAWIAHPDLDIGALL ASGEPLPLVMFDSPCLMRSRAIACLDAAGIPWQVVFVSHSLNGIWAAVQAGLGLTIRTRI GMPGNLRTVAGLLPSPGSLAVNLQQTPREGQHSAAVALLGDLMTEALQGWVEM >gi|289777623|gb|GG745508.1| GENE 1212 1319039 - 1320511 2146 490 aa, chain - ## HITS:1 COG:HI0946.1 KEGG:ns NR:ns ## COG: HI0946.1 COG0076 # Protein_GI_number: 16272884 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Haemophilus influenzae # 13 487 17 497 511 529 56.0 1e-150 MSTLNPILAGSAQSVEAYQQVIEQTSQAVVQWLKQPEMYQGKSVDELRERISLEFNEQGL GNQAAIDRAIEYFLKDSLSVHHPQCVAHLHCPSLVISQAAEVLINATNQSMDSWDQSPSA TIIEMKLIEWLRARVGYPAGDAGVFTSGGTQSNLMGLMLARDAFFARQGHSIQQDGLPGD IRKYKVLCSENAHFSVQKNMALMGLGYRSVTLVKTDEFARMDVSDLKAKIAQAQANGEQI MAIVATAGTTDAGAIDPLRDIAGIAAEHQIWLHVDAAWGGALLLSEQYRDYLDGLELVDS VTLDFHKQFFQTISCGAFLLKDARHYELMRYQAAYLNSEFDEEHGVPNLVSKSLQTTRRF DALKLWMGLEALGQKQYAAIIDHGVTMAKNVAEYVKSQPTLELVMQPQLASVLFRSRPAQ MAQSDAAAIALLNQRVGDALLASGRANVGVTEHNGVTCLKLTLLNPVVTLDDVKVLLNLV ERTAQELLAQ >gi|289777623|gb|GG745508.1| GENE 1213 1320530 - 1321912 1623 460 aa, chain - ## HITS:1 COG:HI0949 KEGG:ns NR:ns ## COG: HI0949 COG0160 # Protein_GI_number: 16272887 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Haemophilus influenzae # 17 455 12 448 454 588 64.0 1e-168 MTDKVRIDTLRADLLDANNETFLARQAEFESNVRSYPRKLPLAITKAEGVWLTDADNKQY LDCLAGAGTLALGHNHPDVLQSIQSVITSGLPLHTLDLTTPLKDRFSEYLLSCLPGEGKE YCLQFTGPSGADAVEAALKLAKKYTGRTAVISFSGGYHGMTHGALSVTGNLSPKAAVNGM MPEVQFMPYPHLYRCPLGIGGEAGVKALTYYFENLINDVESGVRKPAAVILEAVQGEGGV NPAPVEWLQRIRKVTEEHGILLIVDEVQAGFARTGKFFAFEHAGIQPDIIVMSKAVGGGL PLAVLGIKKQFDAWEPGHHTGTFRGNQLAMATGLTTLRHLRDNKIADKVAAQGEWLKGKL AELQKRYPVIGHVRGLGLMIGIEIVKPNEAQDHMGCYPADGELSALLQKKCFEAGLILER GGRHGCVLRLLPSLLISNAELDVFLDKFEQALLAAGVKPV >gi|289777623|gb|GG745508.1| GENE 1214 1322222 - 1323157 1372 311 aa, chain - ## HITS:1 COG:HI0357 KEGG:ns NR:ns ## COG: HI0357 COG0715 # Protein_GI_number: 16272306 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Haemophilus influenzae # 19 310 20 313 314 288 49.0 7e-78 MKKSLFAGATLTALVSGHALANEPLTLVLDWYINPDHAPIMVAEQIGAFKAQGLDVKIVP PSDPALPPRMVAARQADLAITYQPQVHFFADEGLPLVRVGTLINSPLNTVIALNKQIKTP ADLQGKKVGYSVSGIEQATLSTMAQHAGIDPASIKLVNVNFQLTSALLAGQVDAVIGGYR NIEAQELKLQGKTPVVMNVEDYGVPAYDELVIVAHRDAIHEAKIRKFLTALQAGVSYLRA HPQESWEAFAAAHPELKTELNHQAWLQTVPLFATDPAALDKPRYEAYEQFLYNNKLVKKV TPLTNYAVELH >gi|289777623|gb|GG745508.1| GENE 1215 1323182 - 1323922 1008 246 aa, chain - ## HITS:1 COG:HI0355 KEGG:ns NR:ns ## COG: HI0355 COG0600 # Protein_GI_number: 16272305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Haemophilus influenzae # 1 244 1 244 245 189 51.0 4e-48 MTGRLWRGSMVFCGLMILWGLASRSGIPHFLLPSPMAVAEALWVNRAYLGWHTLITLSEI LSGLALGVTLGVTLALGMILSPRLQRWLMPLVLTSQAIPVFALAPLLVLWLGFGMSAKVA MAVLVIFFPVTSAFFDGLRRVNQEYLDLARSMNASFGAQLRHVRLMAALPALGSGLRMAA AVAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAALFILVLLTLLLWLAVDTLLHRL IDWSPE >gi|289777623|gb|GG745508.1| GENE 1216 1323919 - 1324647 215 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 224 2 230 245 87 28 2e-15 MTAPGIEVRGLSLHFGDRRLFDNLSFTVPGGQWVSLLGASGAGKTSLLRVMAGLVPATRG EVVASDGQPIRGRLAWMGQKDLLYPWLSVRDNVALGARLRGEKVDRARVAALLDQVELSS WADARPATLSGGMRQRAALARTLYEDRPIVLMDEPFSALDTLTRTRIQTLAATLLAGRTV VLITHDPQEACRLSHRLLVLSAADGDIDDSHHLAGTPPRAPDAPDLLNSQAALLQQLMRA HP >gi|289777623|gb|GG745508.1| GENE 1217 1324644 - 1325339 890 231 aa, chain - ## HITS:1 COG:BMEI1738 KEGG:ns NR:ns ## COG: BMEI1738 COG0819 # Protein_GI_number: 17988021 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Brucella melitensis # 4 225 6 230 232 178 44.0 8e-45 MIIPAFSHGLYGRLRQLAAADWQHYVAHSFVQQLAEGTLAESAFRRYLTQDYLFLIHFAR SYALLVSKLRTLPEMRAAAASMNAILNELPLHVGYCAQWGISEQEMATQPEAPETINYTR YVLDIGHSGDALDLLVVLMPCVAGYAEIGLGLLQHPATRLDDNPYASWIRNYGDEGYLHG VNVALALLETVWQQRGSEARITELSEIFTTATRLEAQFWQMGLNATAETRA >gi|289777623|gb|GG745508.1| GENE 1218 1325802 - 1326065 135 87 aa, chain + ## HITS:1 COG:no KEGG:Entcl_3233 NR:ns ## KEGG: Entcl_3233 # Name: not_defined # Def: surface antigen (D15) # Organism: E.cloacae_SCF1 # Pathway: not_defined # 21 87 306 375 375 98 70.0 6e-20 MSLFRATAIRATTWSRRKPPWAFTPRWILQGFVGAGRAARTPAEQSEVAWGAGFRYLIAR QYGLRTGIDVAFSEHEQAVYCNVGSGL >gi|289777623|gb|GG745508.1| GENE 1219 1326084 - 1327022 1207 312 aa, chain + ## HITS:1 COG:no KEGG:KPK_2561 NR:ns ## KEGG: KPK_2561 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 312 1 314 314 610 99.0 1e-173 MRASGTVLTLLLAACGASAAEQSESYFPIWGDEARARGYSIPLPYGVNLSYMNIRQDIMV DSITFSGLKLGNHPIPSDMFAIDAGHTREKSKTENLRLDMWVFPFLNVYGLVGHTRGSSV SQVSVDSDPSQFRGLDRAIAGAVHQLYQSGKLQDIDFTLDFKGTTWGTGFTLAGGYGNWF GLVDTNYTRTDFDILDGSISAVTVSPRVGYRFSFQGIDGPSHLSLWVGSMYQDVQQEFKG DLADLHMPPELQPLIAAVNKDGEGKFDVKQKLTSPWNMLIGAQYEVTKNFNVLTEFGFNE RNSFFVSGEYRF >gi|289777623|gb|GG745508.1| GENE 1220 1327088 - 1328194 1407 368 aa, chain + ## HITS:1 COG:no KEGG:KPK_2562 NR:ns ## KEGG: KPK_2562 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 368 1 368 368 750 100.0 0 MRKALWLLFALSLPALAQDPVLPAVTAIHPVPTLGELPPPESLRPCCAFGYDLHVRAVGI PIPVYQIGNVLTLDTLGKHHYNDSAFGAVKNLLGLSEEQNGLIYTRRGGFIDIAHVRDTA DYTFYLFNRIAPTLGQAGRIFYSEELGVRRVQLNAFTPPAGVRQRYQLAAWLAGHLAFEI AQWHEIAQWYGFQSVPGFSEEISAFSPEDLYSNLLGARLAINVILSGHGGSLEDYNQAMD TALKQALTRLMVATRGETEAMFQRIDGDWWNSHRRVPDKFLVLKRNYDLQENRLPTPVPF ETLPPYRLTMPEQVGGFRLRDLGELQIYPGHDMQALPVPAQYYGAGAFQALADSAREADK TQLSRIEK >gi|289777623|gb|GG745508.1| GENE 1221 1328232 - 1329404 1412 390 aa, chain - ## HITS:1 COG:AGpA638 KEGG:ns NR:ns ## COG: AGpA638 COG0673 # Protein_GI_number: 16119663 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 390 1 390 390 580 69.0 1e-165 MINGLKPLDRTLRWGMVGGGGSSQIGYIHRSAALRDNTFTLLAGAFDIDAERGRQFGQQL GVDPDRCYADYQSLFRGEAERPDGIQAVSIATPNNTHYAICRAALEAGLHVVCEKPLCFS SEEADELVALSQRQHKIIGVTYGYAGHQLILQARQMIADGLLGDIRIVNMQFAHGFHAQP VELENASTRWRVDPRFVGPSYVLGDLATHPLFLVETMAPQLNITRLMCARQSFVKSRAPL EDNALVLMEYDNGAVGSLWSSAVNCGSMHGQKVRIVGEKASLEWWDEQPNQLRYEIQGEP VRILERGMDYLDPLARQDDRIGGGHPEGLFEAWSNLYRRFAIAMDAADRRDEALLADFWY PDARAGAFGVRWVENCVRSADNGACWVDFR >gi|289777623|gb|GG745508.1| GENE 1222 1329418 - 1330341 997 307 aa, chain - ## HITS:1 COG:RSc1247 KEGG:ns NR:ns ## COG: RSc1247 COG1082 # Protein_GI_number: 17545966 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Ralstonia solanacearum # 1 307 6 312 313 344 55.0 1e-94 MTLSIANAPCSWGVDDPKNPDLPAWATVLKEAAQAGYRSIELGPWGYLPTDPASLRAALE QHQLSLVAGTIFDDLVSEAHFPTLVALTHQICRNLSQVPAAEPTPGHPVQPPYLVIIDFG NPERARFAGRGALAPRLDDKDWQRMMAHITALSTLAWQEYGVRAVIHPHAGGCIEFADEI ERLANDIPHDVAGLCLDTGHLYYAGMDPLDWLDRYYARLDYLHFKDVDPQVYQRAIAEGI DFFTACAEGVMCPLGSGAIDYPAIKDFLARRGYQGWITIEQERDPRHAAGSLQAVTESLR YLRDVGF >gi|289777623|gb|GG745508.1| GENE 1223 1330533 - 1331573 1173 346 aa, chain - ## HITS:1 COG:mll7623 KEGG:ns NR:ns ## COG: mll7623 COG1879 # Protein_GI_number: 13476333 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 9 346 8 345 345 214 38.0 2e-55 MKKSATKITLADIAREANVGIATVDRVLNKRAAVKESTALSVLEAARRLGFTLEQPHYRL AAGKAPVTVRMGFILLQETHSFYLPLAQALTREAAPWLPAGQVPVILHFAIDAVEAMAQA IHRLSDEVDVLGLVALDHPLIRHAVARAAARGVRVFTLLSDLSVPQRSGYIGLDNQKAGR TAAWFIERLCRGDGEIGIIIGDNRFTCQESCEISFRSCLREQGMGQQILEPVRSHERADI ARSVTEQMLSQYPALQAIYAPCGGVEGIVEALRDSGRQQAITLVCHGPLNDSELALIDGT IDIMLNHRLEAFAAATLRTITDAVSRSHSEVISLPQPFDIITKENM >gi|289777623|gb|GG745508.1| GENE 1224 1331971 - 1333227 868 418 aa, chain + ## HITS:1 COG:Z2421_2 KEGG:ns NR:ns ## COG: Z2421_2 COG2202 # Protein_GI_number: 15801824 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 EDL933 # 92 240 2 150 150 194 58.0 4e-49 MLLKELAVFDVLSTPIWVVHPFTESVVYANPASRTLSGDMSLKEMRNGIYSTCPETQLQH YLRYLDTMTEIFEVWTLQTGKGLQSVYCKTTLVDIDDSGTLLLFEAVKLLAQNQSIHTGS RRYQRRNNGFFARFFMTNTAPMLLIDPSKDGRIVDANIAALRFYHYSDEEMRNKHTWQIN TLGRDVIPIMNNIANMPGGHKPLNFTHILADGTLRHVQTYAGPVVLYNIRLMLCIIHDIT EEVHLKKELEFSAAHDPLTGLLNRREFYRLVEAPSFIAQGFCLLLIDIDHFKSINDIHGH QKGDEVLLVISRILETSVDREDKIYRWGGEEFLLFLPHSPIARALILAEGIRQAVSEYQT LSVTVSIGVAEHHDGEAIDQLFSRVDKALYVAKNGGRNRVSRLPFENVELLHSRGGAA >gi|289777623|gb|GG745508.1| GENE 1225 1333352 - 1334293 1157 313 aa, chain + ## HITS:1 COG:no KEGG:KPK_2567 NR:ns ## KEGG: KPK_2567 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 313 1 313 313 581 100.0 1e-164 MVRLFVLLSVLSLYAPATLAANGHAIKQRADAVLTLMSYTVVPDVTASDLNIGSGSNDKH NLAITQFGGGATLSESFPLYLEGTMGYSRYDPRFVVSNGEQTRNVPTKWNSLTTTGGVGW DFSLHRDSLGGNLVLRPIVNVMLGTLASDARIGSWAIERKTNADLQFLDGGRFNAWGLGG ALMLDYERFSATQDIDAELRYSYMHLQSFGSSAEVVQGEASAENLGLYLRRRAPIADWTL LGNPLRYVLEGAHTEFLGEQRGALGFTGLTSLGVGLELDSSKYPVFITRTRLVARYMFGN NTTGYGVGLAMSF >gi|289777623|gb|GG745508.1| GENE 1226 1334415 - 1335722 1502 435 aa, chain - ## HITS:1 COG:ECs3756 KEGG:ns NR:ns ## COG: ECs3756 COG0402 # Protein_GI_number: 15833010 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 6 432 10 436 439 548 58.0 1e-156 MDYQTAVRGAFFDIAGVAETPDEVAAQARYLDDGLLFLRDGKIIALLPWQEGEAFLHPLK GYVDQRGKLLLPGFVDTHIHYPQTEMIGAFGEQLLEWLTTYTFPVESQFADADYAQEIAQ FFVNQLISHGTTTALVFCTLHPASAEALFSEALRLNMRLIAGKVMMDRHVPDYLCETAGE SYEQTRELILRWHQRGRLGYAITPRFAPTSTPALLEAVQRLRTEFPDTWLQTHLSENREE IAWVKQLWPEHARYLDVYHHYQLTGERSVFAHGIHLDDAEWQCLHDTGSAVAFCPTSNLF LGSGLFRLPACWQHQVRMGIGSDVGAGTTFSMLRTLGEAYKVGQLQSYRLRASEAFYHAT LGGARSLRLEDKIGNFQPGKEADFVVIDPAVTPLQRLRTGRCHDIYEQLFVLMTLGDERN ISETWVNGERVWCQD >gi|289777623|gb|GG745508.1| GENE 1227 1335826 - 1337322 2183 498 aa, chain - ## HITS:1 COG:YPO1083 KEGG:ns NR:ns ## COG: YPO1083 COG1953 # Protein_GI_number: 16121384 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Yersinia pestis # 19 489 16 486 494 747 80.0 0 MPHSSHTQQKKTHEAAASYSPRLCNEDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAAS FFTLGLASWQVLLCLLVGICIVQLCANLVAKPSQMAGVPYAVICRQAFGVFGANIPAVIR GLIAFAWYGIQTYLAANALMLVLLKFWPSLASLTSSSFLGLSTLGWLCFATMWLLQAMVF WHGMNAIKRFIDIAGPAVYVVMLALAGWIVYKTGLDGISFTLASKSLSAGEQTWQMITAT ALVVSYFSGPLLNFGDFSRYGKSMGEIRRGNRWGLPFNFLLFSVVTVVIVSGTQSLFGKM ITDPIETVSRVGNDLAVAIGLLTMITATIGINIVANFVSPAFDFSNCAPQKISFRTGGMI AAVGSILLTPWNLFNSPELIHYTLDVLGAFIGPLFGILIADFYLIKRGRVSVDDLFDDTP KGKYWYRNGFNPKAIAALLPSVGLGLIISFIPALHEVANFSWFIGVFLGATLYRWLARDE REAQATAAFHSGAVAQKE >gi|289777623|gb|GG745508.1| GENE 1228 1337467 - 1338183 782 238 aa, chain + ## HITS:1 COG:PA1520 KEGG:ns NR:ns ## COG: PA1520 COG1802 # Protein_GI_number: 15596717 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 16 238 23 248 259 129 36.0 5e-30 MNNEHRLQAAPALQDKDESIYQALMTAIVEHQLPPGSKLPEEALAEVFAVSRTGIRKVLQ RLAAVQLVTLTPKRGAHVTSPSVEESQAIFRTRALLEVANLPDVIARCQPPHLAALENII QREQQAHEAHDGPAAIRHSADFHIQLQAISGNPVLTEMVTRLSQRSSLVIAAWGAPWRQG CRCDDHQQLVGLLRDKALQPLSEALMHHFDHIVASLCFERDGVSLPDFSRLFAGHKEP >gi|289777623|gb|GG745508.1| GENE 1229 1338183 - 1338926 861 247 aa, chain + ## HITS:1 COG:SMa1652 KEGG:ns NR:ns ## COG: SMa1652 COG4126 # Protein_GI_number: 16263357 # Func_class: E Amino acid transport and metabolism # Function: Hydantoin racemase # Organism: Sinorhizobium meliloti # 6 246 3 241 261 229 52.0 3e-60 MSAICIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGVPSIEGHFDEAIAAVGV LEQIKAGREQGVDGHVIACFGDPGLLAARELAQGPVIGIAEAAMHMATMVATRFSIVTTL PRTLIIARHLLHQYGFHQHCAALHAIDLPVLALEDGSGLAQEKVRERCIRALKEDGSGAI VLGCGGMATLAQELTRELRVPVIDGVSAAVKMVESLVALGLATSKHGDLAFPEKKALSGQ FQSLNPF >gi|289777623|gb|GG745508.1| GENE 1230 1338939 - 1339871 1094 310 aa, chain + ## HITS:1 COG:RSc2120 KEGG:ns NR:ns ## COG: RSc2120 COG0726 # Protein_GI_number: 17546839 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 5 310 11 320 328 460 69.0 1e-129 MGENQEHYPRDLRGYAGEPPHARWPGGARIAVQFVLNYEEGAENHVLHGDAGSEQFLSDI IGAASYPARHMSMDSLYEYGSRAGFWRIHREFSQRGLPLTVFGVAMALARHPEIVAAIKA ADYDVVSHGWRWIHYQHMDIAEERAHLQKAVQVLTDLFGKPPTGWYTGRDSPNTRQLVVE HGGFDYDSDYYGDDLPFWSEVACSDGSQRPHLIVPYTLDANDMRFATAQGFNTAEQFYTY LKDSFDVLYAEGETAPKMMSVGMHCRLLGRPGRFRALQRFLDYIQQHDKVWVCTRQQIAD HWRETHPYRG >gi|289777623|gb|GG745508.1| GENE 1231 1339959 - 1340750 423 263 aa, chain - ## HITS:1 COG:PA0790 KEGG:ns NR:ns ## COG: PA0790 COG0730 # Protein_GI_number: 15595987 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 5 261 4 269 271 149 48.0 6e-36 MNDIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPELAGNAMHVAVATSTAVMI FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSEKIVRALFILYMLATIS DCLLRKGFFRGSARRRLSLPVVTGGGMVIGMIAALLGVGGSVMTVPLLRRHGYEMQECVS ASNPLSLPVALCGAVTYAVIGWHSIPLSGFLGFISLKILGLLVLTGWAGIVFSRRAIPAV PDVWYARIYVLLLCLVLLAMLIQ >gi|289777623|gb|GG745508.1| GENE 1232 1340861 - 1341628 418 255 aa, chain + ## HITS:1 COG:PA0791 KEGG:ns NR:ns ## COG: PA0791 COG2207 # Protein_GI_number: 15595988 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 1 253 1 252 262 258 55.0 7e-69 MRNVKIDEVDRLDREVVALGNDYAQGYILPPHQHRRAQLLYGATGLMYVTTQDGEWVVPP QHAVWIPPETVHAVRFVGVTTRSLYIEPDYVAAFIKHRRCEVISVSPLLRQLLLEAVDLP PLYDSPRDRMLIQLMLLELAAMPVREFDIPLPQHPALLALCQAFLLNPSIHDPAARWARA LFMSPSTFRRHFLKQLGLSFSAWRQRACVVSALAWLIAGKPVNEVALSLGYDNASSFATM FRRVTGQPPSFYHPA >gi|289777623|gb|GG745508.1| GENE 1233 1342412 - 1343260 462 282 aa, chain + ## HITS:1 COG:CC3468 KEGG:ns NR:ns ## COG: CC3468 COG5006 # Protein_GI_number: 16127698 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Caulobacter vibrioides # 7 258 9 262 290 179 48.0 4e-45 MQKNQNLPFLAAFAGMVSVQTGAAFAKTLFPVVGSEGVAALRLGISSLVLLAVFRPWTLR KSEVSWGAMALYGIVLALMNLLIYRAFAYIPVSIAISIEVMGPLAAALLTSRQKTDLLWI LLSASGLFLLAAGDINKLIDVRGVAYSLTAAFFWGVYVIVGRRVSGGGGRSVAAGMTIAA LIAVPLGTAQAGSALLLPGVLITGLCVAILSSMLPFLLDMYAMRWLPSRVFGVLLSGSPA VSALAGWIILNEKLSLLQCGGILSVMAACAGCALFARPRTLS >gi|289777623|gb|GG745508.1| GENE 1234 1343264 - 1343764 364 166 aa, chain - ## HITS:1 COG:mll7935 KEGG:ns NR:ns ## COG: mll7935 COG1522 # Protein_GI_number: 13476573 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 10 161 8 159 159 139 44.0 3e-33 MSKKITRHELDRFDLSILDILQVNNRLPHSAIAEKVGLSTPSVQRRISRLEDKGVIRTNI AVIDPAQAGNPVTAVIESRLVEDRSIVMDRAKRYFRSVDEIQQCYFVNGGVSFIIIMLAR DLQHFERLVRQHFADNQDILTYRTLIVLDTVKAGLRIPLFDLEERA >gi|289777623|gb|GG745508.1| GENE 1235 1344316 - 1345041 595 241 aa, chain - ## HITS:1 COG:STM2437 KEGG:ns NR:ns ## COG: STM2437 COG0518 # Protein_GI_number: 16765757 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Salmonella typhimurium LT2 # 1 232 1 232 239 290 58.0 2e-78 MRVHFIVHESFEAPGAYETWAINQGHDVTYSRVYAGDRLPDDAVGIDFLIVMGGPQDPNT TLEACPHFNAKAEQTLIASAVKTGKAVIGICLGSQLIGEALGAPFSHSPEKEIGKFPITL TEDGRKDEMFSHFGETLAVGHWHNDMPGLTPEAKIIAYSEGCPRQIVAYSDRVFGFQCHM ELTLDVVERLIAHSEKDLSRAAEYRFVDTPEALRAHDYSEMNQVLFGFLDKLEARYKAAQ A >gi|289777623|gb|GG745508.1| GENE 1236 1345479 - 1345934 -81 151 aa, chain + ## HITS:1 COG:AGl3315 KEGG:ns NR:ns ## COG: AGl3315 COG2207 # Protein_GI_number: 15891776 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 149 117 268 287 87 35.0 1e-17 MITATPLVKELIAGLFSEDYARPSQRKIALLLLEILSEAPPLTMALPMPNDERLFSAARS LLVNQRWEASLSELAFMSAMSERTFSRLFMKDTGFSFRTWKQRARICASLDLLANGVPIK QVAYQLGFSCPAAFTAAFRCILGSTPRDFVP >gi|289777623|gb|GG745508.1| GENE 1237 1346396 - 1347034 -127 212 aa, chain - ## HITS:1 COG:no KEGG:KPK_2579 NR:ns ## KEGG: KPK_2579 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 212 88 299 299 428 97.0 1e-119 MDSELNHTALELISKEWSQLRAQYVRILVPGQSFPQGIPDQYIYATSFSDPPEFNDKSLT LQVATYEDFDWCCQALGDAYKHTWQTVRELSASNLVAVDDEELCDHISEREVYIIYENDV RVGLLICQKGNLAFLRGYRITDKVILPAFRGRSLSARAQRLLYRLLTHSDSELSLYMGTI IPENIPSMKTAERAGRTCILSYQFLPIRSTHD >gi|289777623|gb|GG745508.1| GENE 1238 1347497 - 1347907 292 136 aa, chain - ## HITS:1 COG:Z0414 KEGG:ns NR:ns ## COG: Z0414 COG4405 # Protein_GI_number: 15800048 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 5 136 5 136 136 144 51.0 6e-35 MVEVEEIKKKYPGADAWQMGDSPELANELAELIKKGIKTASCGSFASYQQEESAPRIGSY NIILDGQNVPVCVIRLISMQLVRFCDVTEAFARKEGEGDLSLEYWKKEHQRFFSSEGHFS EDMELIAEEFEVVEVL >gi|289777623|gb|GG745508.1| GENE 1239 1348106 - 1349041 510 311 aa, chain - ## HITS:1 COG:RSp0910 KEGG:ns NR:ns ## COG: RSp0910 COG0583 # Protein_GI_number: 17549131 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 11 309 6 305 309 181 35.0 1e-45 MNGLGNISIRALLIFIDVYETQNFSVVARREGISASQVSRVIHQMEDVLGQQLFYRNTRA IIPTESGHLFIRYARAMTGSMEEARRELNERTLEPSGMVRINAPVFFGQRHVAPALPGLT ERYPKLSIELTLTDDYIDPHREPADVIFRIGVLTDSAFHARVFGQQFYHLAASPDYIRRH GMLGSPEELARHQCLVYRGSSGPNQWLLRRHGEEWVHYPVSPLMSSNNAETLLIAALGGM GIVLFPDWLIGDRLKSGELVGLLPELDTSIKTEPQHIAAIYPNARHPPLNVRAIIDYYLD AFGSPLYWQSE >gi|289777623|gb|GG745508.1| GENE 1240 1349141 - 1349575 333 144 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1093 NR:ns ## KEGG: Ent638_1093 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 144 1 144 144 203 89.0 2e-51 MQLILIFIVIAGGMGLSIEAGLLGPLGGEVGDLWATFSIFGVGAALTFLLMLFFSPRNSP SFFAQPAWQLLGGVLGPIYVIILTVVTPAIGIAMTMIGILAGQVFKSLIIDHFGLLGTSR RKIDSKRIIALIFIIAALVMVAQG >gi|289777623|gb|GG745508.1| GENE 1241 1349585 - 1350076 516 163 aa, chain + ## HITS:1 COG:PA3320 KEGG:ns NR:ns ## COG: PA3320 COG3238 # Protein_GI_number: 15598516 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 4 138 5 137 151 58 35.0 4e-09 MTIIMILLAVAGGAMLSIQAAINGQLGSKVGVFKSAFLTFSIGALVTGLLIFFFEPKHTL TLMDVPKWQLLGAMFGVPYIVIMVLAVQRIGAAVATVAVIFGQLTMSMLIDNFGWLGNAS IPFSMSRLGAIVCLGIALFFIYSSSKSKAATAKTPRQQENANT >gi|289777623|gb|GG745508.1| GENE 1242 1351013 - 1351546 119 177 aa, chain + ## HITS:1 COG:no KEGG:KP1_3147 NR:ns ## KEGG: KP1_3147 # Name: not_defined # Def: putative phage-related regulatory protein CII # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 177 194 370 370 353 100.0 1e-96 MEFFVVPMSIDVFSLWAIKNIGSTVSIWKKELDTGIRLSEEPSELSQLSPQGKLKFLGYV TQQHKERSGYDTIQLENTEEEIKSKRRVKAYEDIGEVFPSKITEHLSKLYASKDMNPHLG DIRHLGSLAPKSQSQHVPMISVSGTGNYTRLRKSARELYRDIARRYLENIQTANGEK >gi|289777623|gb|GG745508.1| GENE 1243 1351859 - 1352446 -215 195 aa, chain + ## HITS:1 COG:no KEGG:KP1_3146 NR:ns ## KEGG: KP1_3146 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 195 104 298 298 371 98.0 1e-102 MISLGQRIILTTNFDKLIESAWTSSLADGDRHFKVISKVDNDIFKVLKEHDTSYIIKIHG SIDDVSNIVFSRSQYIRLAFGNENYSLFLDSLLLNYTFLFVGFSMDDPAITSLMELYAYR YPRSRPHYIITSNNIPQNIREIHRRLRKLIVIPYNARNNHAELPELIEEMAEKVEIKMRT NIASMLAKTIASENT >gi|289777623|gb|GG745508.1| GENE 1244 1352506 - 1352712 220 68 aa, chain + ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 4 68 24 88 88 95 81.0 2e-20 MPIVKDVCREARISEASYNNWKAKFGGMEASDIKKMKDFEDENRRLKQMFADLSLECRAL KDIIEKKL >gi|289777623|gb|GG745508.1| GENE 1245 1352853 - 1353557 328 234 aa, chain + ## HITS:1 COG:STM2764 KEGG:ns NR:ns ## COG: STM2764 COG2801 # Protein_GI_number: 16766076 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 3 157 1 155 155 264 81.0 8e-71 MALTVAAERYPRYGFKKLFQVLRRQGNSWNHKRVHRIYCLLKLNFRRKGKQRLPVSNPAP LATPEAMNQSWPIDFMHDALVCGRRFRTFDVVDDFNREALAIEIDLNIPAQRVIRVLDRS VANRGYPLKLRMDNGPELVSLTLAQWAEEHGVILEFIKPGKPTQNAFIERFNRTYRTEIL DFYLFRTLNEAREITERWLAEYNSERPHESLNNLTPEEYRLMAEKPELSKSAWN >gi|289777623|gb|GG745508.1| GENE 1246 1354023 - 1354502 60 159 aa, chain - ## HITS:1 COG:no KEGG:KP1_3141 NR:ns ## KEGG: KP1_3141 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 159 191 349 349 321 97.0 5e-87 MMIGMQLCLTHEEESQKQSILLNYLSNHLGGIVMFSNMRPLTTEEMLEQTCEILKVNFQC TIMKVVGETVTARRQSGITVVIRHQSPSNYAYIIMTPEGKQLSRVDSADHHKIPYGPDHV HSDLRKSTKNVVETSFTYGHIGLDMKLLLKLIQEAEDKL >gi|289777623|gb|GG745508.1| GENE 1247 1355295 - 1356089 711 264 aa, chain - ## HITS:1 COG:ECs3122 KEGG:ns NR:ns ## COG: ECs3122 COG0583 # Protein_GI_number: 15832376 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 242 27 265 292 127 30.0 2e-29 MTQSGASQAIAQLEASLGFPVFTRERRYIGITALGEQVVEHARNMLSQLNAIRELADRGR NVTRGRIRLASFPSVTSTLLPGLLRDVKRLHPGIDVVVLEGSDEEVEAWLAADTVELGVV MNPVPGRAEVVLGQDAWVAVLPASHRLAQHAKADGITLKALADQPFVLATGGCVVNGKSL MEKAGLQLSDIRVTVRDWISACKLVGEEMGVALVPESALPETLRNLCVVPVTPAIHREFG LVCSPSGTSSDATQALLNALRKRR >gi|289777623|gb|GG745508.1| GENE 1248 1356300 - 1356914 420 204 aa, chain + ## HITS:1 COG:YPO2367 KEGG:ns NR:ns ## COG: YPO2367 COG0625 # Protein_GI_number: 16122590 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Yersinia pestis # 1 198 1 198 201 196 50.0 2e-50 MKLYYAPDTCSLSPHIVLRELNLEFELVRVNNRSKITADGRDFLTINPKGYVAALELDDG QILTEGPAMVQYLADRKPEYGLAPRAGSWERVRLQEWLNFITSEIHAGSAPLFNSALAED VKTIFRDKLFRRFDFLQTTLSEKTYLTGPSFSVADAYLFTVLGWCKFFAIPLDRWPALSS YMEIINARPAVQAALRAEASQQGR >gi|289777623|gb|GG745508.1| GENE 1249 1356963 - 1357277 362 104 aa, chain - ## HITS:1 COG:no KEGG:KPK_2591 NR:ns ## KEGG: KPK_2591 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 104 1 104 104 187 100.0 1e-46 MKKLLICCLFGNTANSLAKKIQLLAEKKGHPLIVSAVGLENFASVAPAFDGFLIAPHIQY KVAEIRGIVGDARSIAVIESLPYASLDAEKVFAFVMAQMPELAI >gi|289777623|gb|GG745508.1| GENE 1250 1357366 - 1357485 109 39 aa, chain + ## HITS:1 COG:no KEGG:KPK_2592 NR:ns ## KEGG: KPK_2592 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 39 1 39 39 65 100.0 6e-10 MMMLTFLAKMTDSEDLDKGHCHAVAALRRLLWQKREISD >gi|289777623|gb|GG745508.1| GENE 1251 1357543 - 1358817 1461 424 aa, chain - ## HITS:1 COG:PA1373 KEGG:ns NR:ns ## COG: PA1373 COG0304 # Protein_GI_number: 15596570 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Pseudomonas aeruginosa # 6 423 3 421 422 533 73.0 1e-151 MGVSVKRIVVTGMGIVSPLGCGVQHVWQSLLAGKSGITRLSEQLVADIPCKVAGQVPSID SDPLHGFDPLATIPAKERKKMDRFIEFALVAAREALAQAGWSPASEAEQERTATVIATGI GGFSEIANAVHTTDERGPRRLSPFTIPSFLANLAAGHVSIAHGFRGPIGAPVTACAAGAQ AIGDAARMIRSGEADIALCGGAEAAIHRVSLAGFAAARALSSASSDQPEAASRPFDRDRD GFVMGEGAGLIVIESLEHALARGATPLAELVGYGTSADAYHLTAGPEDGNGARRAMETAI RQAGVTVDEIDHINAHATSTQVGDKGELAAIKTLFGAHPVAITSTKSATGHLLGAAGGIE AIFTIQALRDQVVPPTLNLHHPDEEAAGLNLVALQARPQKMRYALSNGFGFGGVNASLLL KRWE >gi|289777623|gb|GG745508.1| GENE 1252 1358837 - 1360399 2033 520 aa, chain - ## HITS:1 COG:mll2589 KEGG:ns NR:ns ## COG: mll2589 COG0477 # Protein_GI_number: 13472329 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 21 515 12 506 518 580 61.0 1e-165 MSTVQALSAPQGLSMPTAKKIFAFASMCVGMFIALIDIQIVSASLRDIGGGLSAGDDETV WVQTSYLIAEIIIIPLSGWLARVMSTRWLFAASAAGFTLMSLLCGWAWNIQSMIAFRALQ GLAGGSMIPLVFTTAFAFFQGKQRVIAAATIGGLASLAPTLGPTVGGWITENYNWHWLFF INVVPGIYIAVAVPLLVKVDSADPSLLRGADYLSILLLALSLGCLEYTLEEGPRWGWFDD ATLTTTAWVALLCGVAFVIRTLRHPQPVMDLRALQDRTFSLGCYFSFMAGVGIFATIYLT PLYLGSVRGFSALEIGLAVFSTGLFQVMSIPFYSWLANRVDLRWLLMTGLIGFAVSMYSF VPITHDWGADQLLLPQAFRGLAQQFAVAPTVTLTLGSLPPARLKLASGLFNLMRNLGGAI GIALCGTVLNDRTNLHYSRLADHLNNANLAMSDFVQRSAANFTVQGISPDAAQTAALKNL SALALREARTQAFSDAFYLIMMVFLLAALLVPLMKKPPAH >gi|289777623|gb|GG745508.1| GENE 1253 1360396 - 1361439 1228 347 aa, chain - ## HITS:1 COG:mll2590 KEGG:ns NR:ns ## COG: mll2590 COG1566 # Protein_GI_number: 13472330 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Mesorhizobium loti # 5 342 26 363 367 262 45.0 8e-70 MNPTSKKNILVLAALGAAALAAASYGAYWWHTGRFMQTTDDAYVGGDISAISSKVSGYIQ QLAVQDNMAVKKGDLLIRIDDRDYRAALAKAAGEVAAQQAALADIQATRQLQQATIAGSA ASLLAATAATEKLANDNRRYNALAASSAISAQIRDNASADYRRAHAEQEKAKADKTVAER QLAVLDARQLQTLAALAQAQANLEMARLNLSYTDIRAPFDGVIGNRRAWSGSFVSSGTQL LSLVPAHGLWIDANFKENQLAHMRAGQPVTIVADVLPNHTFKGHVASLAPATGSRFSILP AENATGNFTKIVQRVPVRIALEGDGAKLDVLRPGLSVIVTVNEKSPR >gi|289777623|gb|GG745508.1| GENE 1254 1361423 - 1361980 573 185 aa, chain - ## HITS:1 COG:mll2592 KEGG:ns NR:ns ## COG: mll2592 COG1733 # Protein_GI_number: 13472331 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 10 158 11 159 182 166 53.0 3e-41 MKNEPLCHAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKAL VDDGLLEKVCYSSTPPRYEYHLTQSGRDFRMVLLALAEWGNRHFAPEGRQMQLVETATQR RVEPVMVDKATGEEIIPGKYTMVPGPAASPMMKYRHEYLLRKREGDSGQKFQPEPYRDAS NESDQ >gi|289777623|gb|GG745508.1| GENE 1255 1362305 - 1363423 977 372 aa, chain + ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 368 1 366 367 417 54.0 1e-116 MKQVGIVGWRGMVGSVLLQRMIEENDFDDISAHFFSTSSAGGVGPVINGKSDILKDADSL SALAEMDIIITCQGGEYTKAIYPALINHGWQGYWIDAASALRMDEKACIILDPVNRDNID RAVKAGVKLFVGGNCSITLSLMGLAGLIKADLIEWMSVMTYQSASGAGAKQVRELIAQSA YISQHLSADELTASGSVLPLVNKVSELINSAGMPVENFGVPLMGSIIPWIDSDLGDGNSR EEWKGEAETNKILGLAPGTIPVNGLCIRVGVIRCHSAAITLKLKREVSEAEFAELVTHSH PWVNYVRNNKQESVSQLTPAAISGSLQVGIGRYKKMSLNNEPVYSVLTVGDQLLWGAAEP LRRMLNILLGKI >gi|289777623|gb|GG745508.1| GENE 1256 1363461 - 1363883 107 140 aa, chain - ## HITS:1 COG:L27646 KEGG:ns NR:ns ## COG: L27646 COG0454 # Protein_GI_number: 15672209 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 4 139 2 141 141 64 34.0 5e-11 MVFIRAAESKDIPSLKTLFLQLGYQTETAILEQRITAPQSMMSALVAETENAVCGVIVIN FILPVHENRLWALISALVIEESSRGSGIGQQLLHAAERLARDKQCAQIELSSSEKRIRAH QFYENNGYKEVRKRFVKHLS >gi|289777623|gb|GG745508.1| GENE 1257 1363969 - 1364355 614 128 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2541 NR:ns ## KEGG: Kvar_2541 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 128 1 128 128 228 100.0 8e-59 MINLDNVDRPAILAEVTAAFYQYEEALVSNNIEALDALFWHDPRTVRLGAGENLYGIEAI RAFRAARPAAGLARDLRHTTITTFGADMAVCSTEFTREGSARLGRQQQTWVRFPYGWRIV AAQVSLMD >gi|289777623|gb|GG745508.1| GENE 1258 1364352 - 1365749 1679 465 aa, chain - ## HITS:1 COG:YPO3261 KEGG:ns NR:ns ## COG: YPO3261 COG0154 # Protein_GI_number: 16123418 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Yersinia pestis # 6 461 7 462 465 569 69.0 1e-162 MTLHHFTIAEIQRALHEGELSAREIARQTLDDIARANPQINAWTEVTAQRMLAEADSIDA LRREKRPLPPLAGIPYAVKNLFDVAGHTTLAGAELLSDRPPATSDSWAVRQLHSAGALLS GMLNMDAYAYGFTTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVHFSLGSDTNGSI RVPASLCGIFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVADLAAVYDALQGRDPADDF QADKASERTGNLLERGLEGLRCARLGGYFTTWCDDDARAAVDRVAHALGADSELQFADAA LARSAAFIISASEGGNQYLTDLRHSPERFEPHSRERLLAGAMIPSAWYLQAQRFRRHARQ AMKSLFSQADVLIAPATPCSATPIGAEEMVINGQPLPVRASMGMLTQPISFLGLPVVTVP LRTASGKPIGLQLIAAPFNEQACLRAARALEAMGITDARVAESAA >gi|289777623|gb|GG745508.1| GENE 1259 1365746 - 1365931 353 61 aa, chain - ## HITS:1 COG:no KEGG:KPN_01769 NR:ns ## KEGG: KPN_01769 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 61 1 61 61 103 98.0 3e-21 MTTQPDWSEYLTQMTHLLDMELDAPRREELERQFARIAAMAQPLMDYPLGPREEIAGVYK A >gi|289777623|gb|GG745508.1| GENE 1260 1365942 - 1366949 1324 335 aa, chain - ## HITS:1 COG:VCA0558 KEGG:ns NR:ns ## COG: VCA0558 COG0405 # Protein_GI_number: 15601317 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Vibrio cholerae # 2 332 186 516 522 318 50.0 1e-86 MLASDGLDSFYRGPLAERLAQGMAALGMPITLGDLQAHRARRPAPLTLQHQQGTLWNLAP PTQGLVSLAILGITDRLNMADADDAQTVHRIVEATKRAFALRDAHITDPRHLDVDVQQLL TPEALQPLADSIDDASASPWGRGKGPGDTVWMGVVDNSGLAVSFIQSIYHEFGSGVVLPD TGIVWQNRGAAFSLDPQHLLALAPGKQPFHTLNPAAARLNDGRVMVYGSMGGDGQPQTQA ALFTRYILQGVPLQESISRPRWLLGRTWGQSSDSLKLEGRFAPACIARLRELGHEVEVLA DFSEAMGHAGAIVRHPNGLLEGATDPRSNGAAAGY >gi|289777623|gb|GG745508.1| GENE 1261 1366811 - 1367527 357 238 aa, chain - ## HITS:1 COG:BS_ywrD KEGG:ns NR:ns ## COG: BS_ywrD COG0405 # Protein_GI_number: 16080663 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Bacillus subtilis # 1 183 1 179 525 125 40.0 8e-29 MHSSNVSTHGMAVAPHHLASQSALAILREGGSAIEAMVAAAAAIAVVYPHMNGLGGDGFW LIVPPEGDPIAIDASGAAGSLATLEAYAGQQHIPHRGPQAALTVAGTVSGWDEALRISRD LTGRALPVARLLADAIGYAEDGIPVTASQAHATASKLEELRHQPGFSETWLVAGEARGPA AAFASPPSPVPCACWPATVSTVSIAGRWPSVSRRVWPRWGCRSPSATCRPTAPGVRRR >gi|289777623|gb|GG745508.1| GENE 1262 1367707 - 1368546 1152 279 aa, chain + ## HITS:1 COG:YPO3259 KEGG:ns NR:ns ## COG: YPO3259 COG1737 # Protein_GI_number: 16123416 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 277 5 281 281 352 68.0 5e-97 MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLG YDKYKDMRDELRTLRQSGMPLTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFAEA LTAMVAARRIVVVGMRNAYPAALHLRQQLLQARGQVLVLPQPGQSLSEELVDLTADDLVV MMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV NSLINLLANAFLHETLDSGRPRIHDIATLYQQLDELEQR >gi|289777623|gb|GG745508.1| GENE 1263 1368761 - 1369546 1138 261 aa, chain + ## HITS:1 COG:YPO3257 KEGG:ns NR:ns ## COG: YPO3257 COG0834 # Protein_GI_number: 16123414 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 11 261 12 262 262 370 76.0 1e-102 MKKLLIALAGAACLLSSVSAAQADQLQDIEKRGVIRIAVPQDFPPFGSVGTDLQPQGYDI DMARYLAKSMKLKLQLVPVTSANRVPYLQTDKVDLVISSLGKNAEREKVIDFSRAYAPFF LGVFGPKGAELKDAAALSGKSIGVTRGAVEDMVLTSVAPQAAQIKRYEDNNTTLSAYLSG QVQYVATGNLVVAAISRQNADKAPVPSFMLKDSPCFIGLKKNEPALKAKVDTLIEQGIKD GTLNGLSEKWLKAPLPASLGA >gi|289777623|gb|GG745508.1| GENE 1264 1369556 - 1370221 898 221 aa, chain + ## HITS:1 COG:YPO3256 KEGG:ns NR:ns ## COG: YPO3256 COG0765 # Protein_GI_number: 16123413 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 1 221 1 221 222 295 76.0 4e-80 MTEQLHFSELWPHWPELLAGLWVTVQLTVLATIGGLAIGILGAAIRSGRPGMLSRVWGGY VEIIRNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMVVNLGAYSTEIVRAGIQVTPKGQ WEAGRVLGLSRTQTFVRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANLI QSRTFLSFEVYLVTTGIYLALSIAMRQLLMAAGRKWLGVQA >gi|289777623|gb|GG745508.1| GENE 1265 1370221 - 1370877 1053 218 aa, chain + ## HITS:1 COG:YPO3255 KEGG:ns NR:ns ## COG: YPO3255 COG0765 # Protein_GI_number: 16123412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 3 218 2 217 217 325 81.0 5e-89 MTTFTDWDIIRNLLLAGRWTVLLSLVAFTGGALVTLPLLLLRLTGGRQVKRLIRGYIELF QGTPLLMQLFLAFFGVALFGIDVSAWTAASVALTLYTSAFLLDIWFGSIRALPKGQWEAS RCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTMLTNVT YQPFKVFALVALGYFILCYPLSRYSRYLENKFNASHHH >gi|289777623|gb|GG745508.1| GENE 1266 1370858 - 1371595 226 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 19 228 147 354 398 91 33 1e-16 MPLITINQMQKYYGDNHVLKGVDLDIDMGEVISIIGRSGSGKSTLLRCINGLEGYQEGSI KLGGMTITDRDSQAREISRSIGMVFQNFNLFPHMTALENVMLAPRRVLKKSQAECRELAQ RMLEKVGLGDRLDYYPANLSGGQQQRVAIARALAMSPKVLLCDEITSALDPELVGEVLKV LEQLAAEGMTLILVTHEMNFAREVGDRVVFMHQGRVWEQGDSKTLFANPQTSELKQFISS VRGLN >gi|289777623|gb|GG745508.1| GENE 1267 1371611 - 1372852 1733 413 aa, chain + ## HITS:1 COG:CC2604 KEGG:ns NR:ns ## COG: CC2604 COG0075 # Protein_GI_number: 16126841 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Caulobacter vibrioides # 17 407 1 391 392 469 59.0 1e-132 MDITQFSQINPPQRLLMGPGPINADPRVLRAMSSQLVGQYDPAMTHYMNEVMALYRGVFR TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP WGEVFTPDQVEDAIKRVRPRLLLTVQGDTSTTMLQPLAELGEICRRHEVLFYTDATASLG GNPLETDAWQLDAVSAGMQKCLGGPSGTSPITLSPRMEEVIRRRRCIEQGIRTDAHHDGV DEMIYSNYFDLGMVMDYWGPERLNHHTEATSALFAARECARLILQEGLDNGIARHKLHGD ALLKGIQAMGLETFGDLRHKMNNVLGVVIPNGVNGDQVRKLMLEDFGIEIGTSFGPLHGK VWRIGTMGYNARKDCVMQTLSALEAVLNYLKFTTTQGAAMQAAWDHYRTEATL >gi|289777623|gb|GG745508.1| GENE 1268 1372849 - 1374108 1409 419 aa, chain + ## HITS:1 COG:YPO3249 KEGG:ns NR:ns ## COG: YPO3249 COG0624 # Protein_GI_number: 16123408 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Yersinia pestis # 10 413 9 412 430 531 69.0 1e-150 MSDTARQQAEREAAASRVMARADRLATLSETADALTRVYLSPEHLQANQLVGQWMQAAGM MVWQDSVGNICGRYEGQQEGAPAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGR RLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQCDTDGVSVAQALVNAGLDPA RIGDAARLPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLNCRFTGEAGHAGTVP MLHRKDALAAAAEWMVQVENLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQ DAPLTALLDELLGEAQAIAGRRQLRFAAEEYYRIAATACDSHLQAVLGEAVAAVQGRSLT LPSGAGHDAIAIAERWPSAMLFVRCRGGVSHHPAESVTAADVGLAIDAFSRAVEKVADA >gi|289777623|gb|GG745508.1| GENE 1269 1374141 - 1375118 1470 325 aa, chain - ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 323 1 298 310 143 34.0 5e-34 MQSNRVARILGIEKPVVQGPLSWLTDARLVAAVGNAGGLGVLGPNAGLTAATAVSTPEAT AEKMREEIRKTKQLTEKPFGVNLIPTAENDIWTPAILPVIKEEGVKVVVYTGYGDGSLKP ALFDELKAAGITIIYRDINPTPENSRRAEQAGADIIVATGFDEGGTLPGTALGTFTIVPL IVDAVQRVPVMAAGGITDARGARAVHALGAEGVFAGSVFISTIESRVPDSVKAKIVAANG LDLRLFRTLPDYYRALPGKLSDTLVAMDRAGASKAELAQAMGGLRGMRLGMLEGNTDEGY ISVGAGIGNIHAITSVAEVVNQLAV >gi|289777623|gb|GG745508.1| GENE 1270 1375287 - 1376198 937 303 aa, chain + ## HITS:1 COG:RSp1110 KEGG:ns NR:ns ## COG: RSp1110 COG0583 # Protein_GI_number: 17549331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 295 1 295 315 231 41.0 9e-61 MQMNLFENIKIFIEIVDAGSFAQAAENLQIHRPAVTKALQQLEQESGVRLLQRTTRRLYL TPEGEEFYRRSKPLLSQADDLLESFAPGRPIRGQLRVDMPIAFARLLVIPHLPDFYQAHP EVEIVLSSSDVRRDMLRDGLDCLLRVGDLEDGDYVARSLGEVALTTCASPGYLARYGAPA TLEDLQSHLAVNWVNSSSRQIMPWRFQTPEGIRQIAIPGKLVLDNSEVFTAAGLAGLGML QGMRFFLQPYIDSGQLVEILPDFPAPRRPLSLLYPHRHLSHKVRVFADWLQGLVATLDRS VSA >gi|289777623|gb|GG745508.1| GENE 1271 1376292 - 1376774 608 160 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2554 NR:ns ## KEGG: Kvar_2554 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 160 1 160 160 141 99.0 9e-33 MKLWNKTLLASALCLTLFGCDDASKVDNKLDKAKDNAEQMKDAAADKAQAIKQDADKQID TLKSQADAEADRLKDQASAIKAEADKKADAIAQQAKDQADAVKQNAKQESDRIVKEAGQI KDNAIGDANQLSAEAASKTKAIQDSIAADKQNTTPPPAQQ >gi|289777623|gb|GG745508.1| GENE 1272 1377007 - 1378107 1454 366 aa, chain - ## HITS:1 COG:RSc0702 KEGG:ns NR:ns ## COG: RSc0702 COG1902 # Protein_GI_number: 17545421 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Ralstonia solanacearum # 1 359 1 359 370 396 57.0 1e-110 MSHLFSATRIGQLALDNRIVIAPMCQYSADEGKATSWHRIHLGQLAFSGAGLLILEATAV EPAGRISPGDLGLWDDETENALRAVVEDIRAWSPIRLGIQLGHAGRKASCAAPWQGGHQL ALNEGGWQTVAPSAVAFHDGDRAPAELSHADMARIKAAFVASALRAQRLGFELIELHAAH GYLLHQFLSPLSNQRRDEYGGSLDNRLRYPLEVFNAIREAVGNTMAVGVRLSATDWVEGG WDCEQSIQFSQQLEALGSDYIHVSSGGLSPQQSITVGPGYQLPFAHDIRQQVAIPVIGVG LITDPQQAEAALEDGDADLIALARAVLYDPHWPWHAAASLGAQVRVPSQYLRSEPHGLKG TLLPNR >gi|289777623|gb|GG745508.1| GENE 1273 1378215 - 1379822 1734 535 aa, chain - ## HITS:1 COG:ydhS KEGG:ns NR:ns ## COG: ydhS COG4529 # Protein_GI_number: 16129624 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 533 1 533 534 680 60.0 0 MKRVAIVGVGPTGIYTFYELVKRGEPLAITLFEKEAQAGVGMPYSDDNTAAQMLANIASI EIPPIDLTYLQWLQQHSDAWLAARGLERHTLHERQFLPRVILGEYYRDRFLYLTERARDA GFIVSVCESCEVTDIAVQPAGIAIHTDSAAEPVIVDLVAIATGHLWPEEERASRQYFPSP WTGLMDARIAPCRVGILGTSLSAIDAAIAVVAQHGVFHTENDKTTHFTLHPGSEALEITL LSRNGVLPEADFYCPIPWEPLEIATPAALEAAVAQGSDGLLDRVFELVVQELEYAAPAWC EATGLRQLTPDSIAEAWFADRLTHDPFQWAQRNLQEVERNKREHHTVPWRYAILRLHEAI ESVVPEFNDEDSRRFRRGLARVFIDNYAAIPPESIRRLLALHQAGILRIVALGEDYDLQR ESHRTLIVHHQQRCEFDVFIDARGQQALKTRDLPFPSLRQQLLACGDDIPDVGDDYTLQA PETLRGRVAFGALPWLMHDRPFVQGLTASAEIGSAMARAVSQQATGRRRRLWFIE >gi|289777623|gb|GG745508.1| GENE 1274 1380099 - 1381331 1527 410 aa, chain + ## HITS:1 COG:STM0356 KEGG:ns NR:ns ## COG: STM0356 COG0477 # Protein_GI_number: 16763736 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 4 399 7 402 417 555 73.0 1e-158 MHGWTSRQRNAAIASFLSWTLDAFDFFLLVFLLSDIAHSFHVDLEEVTLAILLTLAVRPI GALIFGRAAEKYGRKPILMLNIVFFSAFELLSAAAPSLLLFFLLRVLYGVAMGGIWGVAS SLAMETIPDRSRGLMSGLFQAGYPFGYLLAAVAYGLLFEQLGWRGMFVIGAAPVLLLPFI YFCVEESPVWLAARQSKASTALLPVLRSHWKLCLYLVVLMAAFNFFSHGTQDLYPVFLKV QHGFEPKTVSIIAVCYNIASIMGGVFFGSLSEKIGRRKAIMIAALLALPVIPLWAFASGS LALGAGAFLMQFMVQGAWGVIPTWLNELVPANTRAVLPGFVYQLGNLLASVNATLQASIA QHHGHNYGLAMALVAGTVAIVITVLTFFGREGRMIQPAGAGHRQPLSTSR >gi|289777623|gb|GG745508.1| GENE 1275 1381372 - 1382286 1204 304 aa, chain - ## HITS:1 COG:PM1698 KEGG:ns NR:ns ## COG: PM1698 COG0697 # Protein_GI_number: 15603563 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pasteurella multocida # 3 291 9 295 301 185 38.0 1e-46 MPYLLLTLAALFWGGNYVVGHVLVQGVDPILMTEARWALTALLLGLLYRRQIAASRHLLR ENAPAVLVLTLCGQVSFPLTLYIGLQTTSALNAAIYMSATPSMVLLINRLIFRDPVSARN WLGVIFSTLGVMILLFQGNPLHATSLHTFSVGDLWAMGSALSWALYCSLLRLKDRRIPAN GFVAVSSLLGALILLPIVIFWLMRHPAQDWAAWREPIFLSGLAYLVIFPSWLAYLFWNKG IAAIGATRGEIYTHIIPLSGGVLSILFLHTQPHAWHLFSALFIMVGIGICSLEKRQAAAI RLRG >gi|289777623|gb|GG745508.1| GENE 1276 1382490 - 1383590 1228 366 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2559 NR:ns ## KEGG: Kvar_2559 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 366 1 366 366 743 99.0 0 MRNTENGVIGSDQTAVMARLTLDELIDQLLHSNALSLKLTANPLVADRAWHLTENTCIRA FSADDPQAKKRAHHALFILYQSWLADPLSPAAANQFHPLLSGIRNYIESEWLRAESKRFH RQRPVLNAGNIVDELRALCQQHPASHHPLFDFLASEASAAQIDYFFKSDSALNLLFFDLV AMGLVGSLPETRAEIAQNLWDEIGQGSTEITHVNLYKDLLKRRNIALPDNHFAHLYEWQG LAGYNAFMLGGVNRQHYYKSLGVMAMTELLDPPQYEKLVAGCRRIGLSDRDVHYYAEHIT VDIGHADGWLNNVIVPIGKKHPAAMEEVYFGAALRLQTCNDYYDCLLAALQSLDGSASSH SVPPSE >gi|289777623|gb|GG745508.1| GENE 1277 1383566 - 1384144 544 192 aa, chain - ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 4 167 9 172 193 107 34.0 2e-23 MKPKQADILRHASALFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKES EFMQDLAQITADKATAREKLFAVFDYYHRWFICDTFHGCMFTRALFEYGASSPAIREQCS RFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAAQQAESAECREIPPGITAWSA AKALIYSEGGTL >gi|289777623|gb|GG745508.1| GENE 1278 1384785 - 1385318 346 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227987788|ref|ZP_04034884.1| acetyltransferase, ribosomal protein N-acetylase [Meiothermus silvanus DSM 9946] # 1 176 1 177 189 137 40 1e-30 MLPLTTPRLLLRRFRTEDLPSFSHYRNLPEVARFQSWTHYGMTEATAFYEQQRSLAFAED ESWFQLAVEIQANGALAGDVGIHFFDQGRQAELGMTFSPVYQHQGYAREAMRAVMALLFE QLAHHRLMAVVDTRNSGAIKLLEGLGFRREAHYRQNIFFKGEWGDEYLYALLRSEYP >gi|289777623|gb|GG745508.1| GENE 1279 1385356 - 1386612 1500 418 aa, chain - ## HITS:1 COG:AF0367 KEGG:ns NR:ns ## COG: AF0367 COG0477 # Protein_GI_number: 11497979 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Archaeoglobus fulgidus # 34 403 22 392 397 151 28.0 2e-36 MTTLSEPLVTPKYGKWRQLVLGLICMAAISSPQYVWTLLTKPLAAKLGVGLPELQVTFSL LIILQTFFSPFQGRLVEKFGPRRLIAIGTVMAGMSWVLSAQVNGLATLWLVYGCMGGLGT GIVYIGVVGLMVKWFPQQRGFAAGSVAAGYGMGAIITTFPISLSLTTNGLEHTMTTFGIL FALVGFLASQGLKLPPPAVSQPVSQTVAQSSRSFTSREMLRQPLFWLMFAMMAMMSTSGL MVTSQMAVFAEDFGISQAVVFGMAALPLALTIDRFTNGLTRPLFGFISDHFGREQTMFIA FALEGVAMMLWLACREDPLLFVLLSGVVFFGWGEIFSLFPSTLTDTFGSEHAATNYGWLY ISQGIGSIFGGPLAALLYQYTHGWHVVFSCAIGLDFVTAALALWVLKPWRARFIRQHS >gi|289777623|gb|GG745508.1| GENE 1280 1387256 - 1388314 1465 352 aa, chain + ## HITS:1 COG:CC1833 KEGG:ns NR:ns ## COG: CC1833 COG0715 # Protein_GI_number: 16126076 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Caulobacter vibrioides # 29 352 44 369 369 351 56.0 9e-97 MKTSPLLRSLVLSLTLLTSVPSFAAVKKEFNVCWTIYAGWMPWGTISNEKIIDKWASKYG IKINIVQLNDYIESINQYTAGQFDGCTMTNMDALTIPAAGGVDSTALITGSYSDGNDGVV LKGADKKLSDLKGMSVYLPELSVSHYLLVRGLEKAGLQEKDVKVVNTSDADIVSAFGTSG VRAAVAWNPQLSVIKKTPQTSEVFSSSQVPGELIDMMVVNTQTLKDNPALGKALTGAWFE MMAKMKAGDSQALSAMAADSGTDLAGYQAQLKTTHLFWTPADTLAFISSPDLAKTMQRVA QFSFDKGLLGEGAQSADFIGMTFPGNVTLGDAANRKLRFDDSYLKLAAAGQL >gi|289777623|gb|GG745508.1| GENE 1281 1388339 - 1389154 1106 271 aa, chain + ## HITS:1 COG:CC1832 KEGG:ns NR:ns ## COG: CC1832 COG0600 # Protein_GI_number: 16126075 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Caulobacter vibrioides # 1 271 1 270 271 205 47.0 9e-53 MRHINRYPQKGMRLTLMLLPFVVLIAAWFIGSAVRLEANPQDKLLPGLSQMVAAIDRMAF TPDKRSGEYLLWADTLISLSRLLTGLAVSSLIGLGIGIAAGVFPMYRAALSPLMTVVSMI PPLAILPVLFIVFGLDELSKVMLIVIGITPMLARDLEQRAKEIPAELFIKAQTLGANSWT LVLRVVLPQLLSRLITSLRLLLGSAWLFLISAEAISATAGLGYRIFLVRRYMAMDVIIPY VIWITLLAWLMDLALRQLHKACFPWAEGGRG >gi|289777623|gb|GG745508.1| GENE 1282 1389151 - 1389927 203 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 17 219 19 214 305 82 27 5e-14 MSFINIKNIWQEYGEHVVLERINLQVKEGEFCSMVGASGCGKSTFLRLLLGQEKPTRGDI LLDGQPLAAEPDRSRGVVFQRYSVFPHLNVLDNVAIGLELPASPLLGRLFGGRKREARQQ AQHMLEKVGLGHALDKYPAQLSGGMQQRLAIAQAFVMQPRVLLLDEPFGALDPGIRKDMH ALLLQLWSETRMTVFMVTHDLAEGFNLGTRLLVFDKVRIDPQAPNAWGARITYDIPLNEA RMAQLATGSDTNVYALRR >gi|289777623|gb|GG745508.1| GENE 1283 1389932 - 1390660 1114 242 aa, chain + ## HITS:1 COG:CC1827 KEGG:ns NR:ns ## COG: CC1827 COG3665 # Protein_GI_number: 16126070 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 13 238 53 274 279 119 34.0 4e-27 MTVLFHATPSLREERLPGGAHTSLILRKGQILRLTDIDGGANVSMMMLNPHEKSERLNLP DTLKGQHTARLTAGHCFYSDMGRVLAGIVADSCGWHDPFGGVLNAEETHDKYGAGRYQEL RNGFYRNGVDNLLVEMGKWDLGLEDLLMVVNFFSKVTVDDEGRFQFVAGNSRAGDYVELF APMDVLLVLTALPHPQDPATEYAPRPVQLSWYQADDEDAAIQALLTRDENQRAFRNTQLF AL >gi|289777623|gb|GG745508.1| GENE 1284 1390671 - 1391306 920 211 aa, chain + ## HITS:1 COG:CC1828 KEGG:ns NR:ns ## COG: CC1828 COG3665 # Protein_GI_number: 16126071 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 12 209 10 206 208 220 53.0 1e-57 MTVITSNRRPEEAVYRHVIPAGEPWLFEVKKGQTLRLLDLEGNQAIDTLFYNADNPRERY DAQRTLRRQGNAYLTAGSVLYSNLGHPLMTIVADTCGRHDTLGGACAQESNTVRYALDKR YMHSCRDNFLCACLHDGRLHKRDIGANINFFMNVPVTPEGGLTFADGISAAGKYVELRAE CNAMVLISNCPQLNNPCNGWNPTPAEVLVWN >gi|289777623|gb|GG745508.1| GENE 1285 1391473 - 1395078 4063 1201 aa, chain + ## HITS:1 COG:CC1829_1 KEGG:ns NR:ns ## COG: CC1829_1 COG0439 # Protein_GI_number: 16126072 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Caulobacter vibrioides # 1 454 1 448 448 477 60.0 1e-134 MFDTLLIANRGAIACRILRTLRAMQVKGVAVYAEADLSSLHVREADEALSLGEGPAAQTY LVVEKIIAAALQSGARAIHPGYGFLSENAAFAEACEAAGLAFVGPTPQQLRTFGLKHTAR ALAKAEGVPLLEGSELLADSEEACQAAEAVGYPVMLKSTAGGGGIGMRVCRDARELSEAF ATVQRLGQNNFSDAGVFLEKYIERARHLEVQIFGDGEGEVIALGVRDCSLQRRNQKVIEE TPAPNLPDGMAQALCSAAIALGKAVNYRSAGTVEFVYDSAAQRFYFLEVNTRLQVEHGVT EQVWGVDLVRWMIALAAGDLPPLSELAAGLQPRGHAIQARIYAEDPGRQFQPSPGLLTDV WFPPADGATLRIDRWVEAGCEVPPFFDPLLAKAIVWRPSRDEAIAGLAQALAETRLYGVE TNRLYLQQILGFAPFTAGEPWTRCLEQLRYRADTVEVLSAGTQTSVQDYPGRLGYWAVGV PPSGPMDDRALRLGNRLLGNAEGDAALEITLSGPTLKFNTAVQAVICGAPLTVTLDGAGQ DMNCVFTIPAGATLRLGAINGPGVRSYLCLRGGIQVPDYLGSKSTFTLGQFGGHGGRALR AGDVLHLAPLVETGEGAALPAGLRTALTDVRTLRVIYGPHGAPEFFAPAYMATFFATDWE VHFNSSRTGVRLIGPKPVWTRDSGGEAGLHPSNIHDNPYAVGAVDFTGDMPVILGPDGPS LGGFVCPVTVIEADLWQLGQLKAGDKVRFVAVDVPTARRLAAGRRAELATLQAQDVAWQP VPLTSPLVMTCGDADKRLVARLSGDTHLLLEAGEAELDLVLRFRIHALMQALEGQAREGI IDITPGIRSLQLHFQPETLALETLLAWVSGEWATVCMSDDLQVPTRVVHLPLSWDDPACR KAIDKYMTTVRPDAPWCPSNLEFIRRINDLPDEQAVWNTVFDASYLVMGLGDVYLGAPVA TPLDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRYHEV ADFAGKPWLLRFFDQLRFYPVSADELLEIRRDFPLGRYPLRIEHSTLRLAEYQQFLAREA QSIDAFRDHQQRAFNAERDRWIASGQAHFDSQESAAEEAGDAPLQPGEQGVESPVSGNLW QVQTAVGRQVRAGDVLVVLESMKMEIPLLAPCDGRVQQVNVQPGSAVRAGQRVAVIIEEK A >gi|289777623|gb|GG745508.1| GENE 1286 1395078 - 1396871 1786 597 aa, chain + ## HITS:1 COG:CC1830 KEGG:ns NR:ns ## COG: CC1830 COG0154 # Protein_GI_number: 16126073 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Caulobacter vibrioides # 66 595 67 589 594 409 50.0 1e-114 MQQTFDLRLATLAANYRNGNTTPRALLAAIRQRAETLNPEFNLFIHLLSEAEQAPFLAAL EGHSPETLPLYGVPFAIKDNIDLAEIVTTAACPAFAYRPTQSATIVAQLIALGAVPVGKT NLDQFATGLNGTRSPYGRCRNAYHPAYPSGGSSAGSALAVALGVASFALGTDTAGSGRVP AGLNNLVGLKATKGVISTAGVVPACRTLDCVTFFSATADEASQLLALVARTDPQDSYSRR NPQWNSRQAFGRPSAGFRFGVPQTLNFLGCRASEALFAQAVQRLTALGGVPVAIDFAPFL AAARLLYDGPWVAERYAVAGPLIEQQPDAVLPVIRDVLAKAPDIDATATFKAMYQLQGYK AQCDAILDTLDCVLTPTFPRPVTLDELAAEPIARNADLGYYTNFMNLLDYAAVSVPCGFM PDGLPSGVTLFGRAFTDQYLLSLADAFQRAERLPLAGGARLESPPPAHSAGHDRMALAVC GAHLAGLPLNGQLLARGGRLLQATHSAPRYRLYALADGKRPAMVRDERDGAAIAVEVWEI PSAEVGSLLAAIPAPLGLGQVELADGRWVTGFICEAAGLGDATEITAWGGWRQWLTR >gi|289777623|gb|GG745508.1| GENE 1287 1396914 - 1397552 744 212 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2574 NR:ns ## KEGG: Kvar_2574 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 212 1 212 212 397 99.0 1e-109 MKYVIGMTVTLLLSTPVLAAGELEINQSPLTLVLSDQNQARVSSCADFIALRKAGETVDA LPGLSDPDGRAAEAALFSCWLQAYTIDHTLFPSAAPKPTLAEVVQHFPASAAFIVSDDEK QDVAKNYVGKTIADYTPDLKARDDRLESAASASGYVLDEYYAFTDKQGHQLNIVALVGYA IGGTASVKSYYRIDDTHARVWSVTLLDENSPL >gi|289777623|gb|GG745508.1| GENE 1288 1398087 - 1398878 230 263 aa, chain + ## HITS:1 COG:RSc1263 KEGG:ns NR:ns ## COG: RSc1263 COG0561 # Protein_GI_number: 17545982 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Ralstonia solanacearum # 4 258 27 286 295 153 31.0 3e-37 MNLIDNVKNEELQNIRFVLTDMDETLTYKGRLQARTYQSLEMLQHAGIKVIPVTAASAGW ADQMARMWPVDGVIAENGGLFLTRNNIEHGINRYFWHEDKYLLNREKISHILLNIRQKYP WVEVSDDQDFRLTSIAFKLPRNHEQTRQLIDELAENKCSYTINNLWVLGWFGGYDKLAMS RKVLKDFYALEESDEQASVFYSGDSLNDAPMFSYYSKTLGMNTINDIAQVIPSLPRWISQ FPGGEGFVDGANRILNAKRASNR >gi|289777623|gb|GG745508.1| GENE 1289 1399079 - 1399633 459 184 aa, chain + ## HITS:1 COG:CC0456 KEGG:ns NR:ns ## COG: CC0456 COG1280 # Protein_GI_number: 16124711 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Caulobacter vibrioides # 1 184 1 186 208 174 54.0 9e-44 MLVTDSLLAYTLAATLLTLTPGLDTALILRTATAEGGRKALHAALGIDLGCFIWGALVAF GLGALLAVSELAYTLLKWCGAGYLCWLGIQLLLRPRQQFDSNPAEATATSNWFLRGMLGN VLNPKMGFFYVSFLPQFIPAGHSPVSWTFLLVTIHVLIGTLWSLTLITATRYAAGILKKP AVVK >gi|289777623|gb|GG745508.1| GENE 1290 1399758 - 1399919 81 53 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2586 NR:ns ## KEGG: Kvar_2586 # Name: not_defined # Def: LuxR family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 53 154 206 206 115 100.0 4e-25 MQIADELMISEKTVYAHKYMVMRKFNLRNDYELMLLLNKLTKNCAWPGGFINI >gi|289777623|gb|GG745508.1| GENE 1291 1400506 - 1400883 159 125 aa, chain - ## HITS:1 COG:ECs2108 KEGG:ns NR:ns ## COG: ECs2108 COG3539 # Protein_GI_number: 15831362 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 2 118 47 160 167 59 31.0 2e-09 MNIDLGNIQATNMFTPGSSSNPVSFNLLFTSCPPGTLSVTTRFSGTPDPEAGMNYYQNSG TATRVAIAMSDATTGVLMGNGSSITQNIAADRTAKMPMKAMVTSVAGRPTPGSIRAVVVL TMQYN >gi|289777623|gb|GG745508.1| GENE 1292 1401029 - 1401517 151 162 aa, chain - ## HITS:1 COG:no KEGG:KPK_2633 NR:ns ## KEGG: KPK_2633 # Name: not_defined # Def: putative fimbrial protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 162 174 335 335 286 99.0 3e-76 MQYLGGEQAPEIPVNAGAGSITQVACAVKTSNILFELGDVLVSEFGSAVGTTPANAQKTQ NLILDCDAGANINVMLTGPQNPDVSDNTVLALTGQGSAGVARGVGVQLVYNNTPLTLGNN LVLKRTTGGQEMFPLTARYYQTNTTVTTGIANASATLSLTYQ >gi|289777623|gb|GG745508.1| GENE 1293 1402071 - 1404185 1004 704 aa, chain - ## HITS:1 COG:STM4593 KEGG:ns NR:ns ## COG: STM4593 COG3188 # Protein_GI_number: 16767834 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 3 687 140 828 845 655 49.0 0 MQRLVLSIPQAATSAQARGSVPPDRWDEGINAALLNYSLSGANNWAKNNNSSNSDSQYAN LRPGVNIGPWRLRNYTTWSRDSQGHDAWDTVYTYAQRTIIPLKSQLTLGDSSAPADVFDS MPFRGGQLASDDDMLPDSLKGYAPVVRGIARTNAQVIIRQNGYQIYQSFVAPGAFEITDM YPTGGAGDLDVTIKEADGSEQHFSVPFASLPVLQREGRIKYALTGGQYRSYNGSVDKTPF GQMSVILGLPYGFTFYGGLQESSKYQSLAAGVGKNMGDFGAISSDITQGWSTPYNMPKSN GQSWRARYSKNFASTGTNFAIAGYRYSTSGYYGMQEVLDSYGDSNALQDRRRNRAELTLS QGLGDNLGSLMLNASHEDYWNSGKAMESWSVGYNNYWHSISYGLTWTLSRNGSTGSYSAH QSDGKNQMLALNISIPLEKLLPQTWANYGMNASKHNGTTHSVGLNGVAMPNNALNWNIQQ GYGTHDVAYTGNMNGDYRGTYGELTAGYSYDKNTDRLNYGIQGGVVAHANGVTFSQPLGE TNVLIAAPGAAGVGIQNMTGATTDYRGYTLASNLMPYRKNDVSLITETLPANVELEQTVK TVVPTRGAIVRANYVASVGVRMLMTLTQQNGQWVPFGAIASIEGAEHSSFIVGESGQVYL TGLDPQVNLTVKWGNQSANTCRVHYSINMAKLNNDVIIDNAVCR >gi|289777623|gb|GG745508.1| GENE 1294 1404634 - 1405311 279 225 aa, chain - ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 23 224 22 226 227 194 50.0 1e-49 MNVLRSILLTTTIMSIGLSFAQAGVVIGGTRVIFDGNKKEASISINNPDNTPYLIQSWIE TPGDGVGKAPFIITPPLYRLNNGQQNVERIVATGALPQDKESLFWLNIKAIPSASQVDNT LQIAIKTRIKLIYRPTKMKGASPEEQADKLRWQRVGNKIQVNNPTQHVMNFNEISLAGKR VPDVSYVLPGSTAMFDLPSGVTGGPVTFKIINDYGSPGAEHKASL >gi|289777623|gb|GG745508.1| GENE 1295 1405369 - 1405899 534 176 aa, chain - ## HITS:1 COG:STM0025 KEGG:ns NR:ns ## COG: STM0025 COG3539 # Protein_GI_number: 16763415 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 25 175 27 180 181 97 39.0 1e-20 MKKSLILVALTATAALSTSHAFAAAGTVNFVGNILDTACEVDVASQNQQVNLGNFYKSEF PNSGTKAAAKDFNIVLKNCPTTVTSTKVRFDGTPDLTNPNLLAIDTSASSAASGVAINLM TADKVDLPLHGENSYNYVLSSTQDNTLKFYAQYISTTASVTPGTANSVANFSIVYN >gi|289777623|gb|GG745508.1| GENE 1296 1406479 - 1407000 113 173 aa, chain + ## HITS:1 COG:no KEGG:KPK_2637 NR:ns ## KEGG: KPK_2637 # Name: not_defined # Def: cyclic nucleotide-binding domain protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 173 51 223 223 337 99.0 1e-91 MHYYKDDIRQCFLLLQGSVALHRRGDGIVLNSESAPFILGVSSQFSSEHLYVRALETSEI ARVPLDCFNHIVAQLDLWEHFSKLLIYTASRVYEHCAQISQMSAYDIIRFQLVELMQEPD AIRQKITAAAYIKSRTYLSRSGIMRILAELRTGKYITMERGILLDINHLPRKY >gi|289777623|gb|GG745508.1| GENE 1297 1407067 - 1407696 302 209 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2593 NR:ns ## KEGG: Kvar_2593 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 209 1 209 209 427 100.0 1e-118 MSSSERPHKGSPYAQELITHLQPYCTPRKTERGEQLDFKVNGQGVCYLILEGTVAVYRRN DNMMLSTARSPAVFGLANLTDIYFDDYIKTINPCLIGEISTARVNDIIKEKSLWGLLSKQ LMFVYGRLYNNVMPQGAPTAYEMIRQQLLNLIEEDESYRAAVTAELYIREKTHLSRSGVM RILADLKTGGFIEMEEGRLIKIHKLPARY >gi|289777623|gb|GG745508.1| GENE 1298 1407767 - 1408435 239 222 aa, chain - ## HITS:1 COG:no KEGG:KPK_2639 NR:ns ## KEGG: KPK_2639 # Name: not_defined # Def: transporter, major facilitator family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 222 181 402 402 355 93.0 8e-97 MALPLIVFIIPQDPVTFDTSHALPLDVDTLLFASGNALVQFSPMLIIPVLAPLMTQLLGA SQGLLPWLFFGGGLAGYLSTRMTGALTSRVSALCLATGSTLVFILNLLIPLMGYPHPALF ITLFLGAAYSRLVSSSAVTIQFPDNNQRAGFSSLQTSMMYLMTTAAFFLSAFLLPDHRMA LQNMDTLLAVCAITASGTPIIVVVLQKKLAKRTFARDRYSTQ >gi|289777623|gb|GG745508.1| GENE 1299 1409079 - 1409981 335 300 aa, chain + ## HITS:1 COG:SMc02984 KEGG:ns NR:ns ## COG: SMc02984 COG0583 # Protein_GI_number: 15966629 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 10 295 7 290 297 162 31.0 8e-40 MRPVLDFNALKIFIAVVERDSFVGASKALEMPTSNVSRCISQLEDKLNLQLIERSTRHMK LTQAGHLLYTRAKPLLEALEQTETELTLRQMQFKGPLRICIPNEIGPVLLGSVVADFACQ HPDLEISCVTNLSGYESLRDDLDLAVIVSRGQMDDSDYIARHLVTIPCTIVAAPSVIQRY GTPSRIQQFEELPCITTVNALKGAPWQFVNKKGGFETIKVNGRYRVNSGEMAGRAAISGV GFAILSKQACQPYIDDGRLIEIEFEQSAAPLQLFALYSDRRYLPAKTRALIDFMHQRLSH >gi|289777623|gb|GG745508.1| GENE 1300 1410023 - 1410874 324 283 aa, chain - ## HITS:1 COG:PA3124 KEGG:ns NR:ns ## COG: PA3124 COG0583 # Protein_GI_number: 15598320 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 242 25 264 303 132 33.0 9e-31 MSAAARDLGIGQPAVSERIEKLEAHLGTRLLRRNTRNMSLTHSGNVFYERSKTAVQAAEH ALSVNEENQGLQGKIRIAAPYSAGESLLMPALLQLQNEHPELQVDVIFNDRVIDPVTEGV DLSLRLGDVSEGFFVARPLGAVRRVLVASPALLAKMGHPDTPEAMTDYPFAAVSGVFASN RIQLIASEDQLINVPVNIQFQSTHWRSVLSWLLAGHAIGVLQSPVCRKEMADGALIPILS HYPIPPFSAWLLHPPAGMMSYETRICASLLEGYLRDLLLEPAG >gi|289777623|gb|GG745508.1| GENE 1301 1411074 - 1411865 136 263 aa, chain + ## HITS:1 COG:AGpA200 KEGG:ns NR:ns ## COG: AGpA200 COG0491 # Protein_GI_number: 16119365 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 262 1 262 263 343 58.0 2e-94 MPEIKLFMFQSGTQHCRYQHIRMNQGVGEHYEIPVPWFLLTHPDGFTLIDGGLAVEGLKD PSGYWGSAVEQFKPVMSEEQGCVEQLKRIGIAPEDIRYAVLSHLHSDHTGAIGRFPHATH VVQRQEYEYAFAPDWFTSGAYCRRDFDRPQLNWLFLNGLSDDHYDLYGDGTLQCIFTPGH SPGHQSFLIRLPGGTNFTLAIDAAYTLDHYHEKALPGLMTSATDVAQSVRKLRQLTERYH AVFIPGHDPEEWKKNRLAPACYY >gi|289777623|gb|GG745508.1| GENE 1302 1411970 - 1412398 193 142 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2598 NR:ns ## KEGG: Kvar_2598 # Name: not_defined # Def: Tol-Pal system TolA # Organism: K.variicola # Pathway: not_defined # 1 142 1 142 142 256 100.0 3e-67 MSVKTNAVLVCTLSLLLSACSGGASAPDSAEDAKISAEVDKILRDYQTGSDTSPQANASR YLARIQAAIFANIDQPASWQGQKCSVRFTLQRDGTVQDPTVESGDRPFCAQVMSALKKAN IPPAPDEKTYQTFSHVVLDVKP >gi|289777623|gb|GG745508.1| GENE 1303 1412510 - 1413652 1027 380 aa, chain - ## HITS:1 COG:RSc1641 KEGG:ns NR:ns ## COG: RSc1641 COG0624 # Protein_GI_number: 17546360 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Ralstonia solanacearum # 3 374 9 396 397 157 31.0 3e-38 MTATLELARQLLGFNTINPPGSEADCMRFFADWLDDSGFEVSLSSFGEGRCNLIASLPGA KSGKPLAFTGHLDTVPLGNARWQYDPFGSQMEDGRLYGRGSSDMKAAIAAFAVACVHQRE AILAGRGAVLLITGGEETGCDGARALIASATLPEVGALIVGEPTANYPVIGHKGALWLRC ETRGKTAHGAMPELGINAIYLAADALGKIQHFSPGAPHPLMKQPTLNVGRIEGGLNINSV PDRTRFDVDIRSAPNLQHATIRERLTTLLGESVTVSTLVDLPAVLSREDHAWIKQVYQRC QPLHAEPIAPRVVPYFTDASLLLPALGDPPCIILGPGEPSMAHQTDEYCLLSRLAEAEQL YGDIIRDWMASPPATKVKNE >gi|289777623|gb|GG745508.1| GENE 1304 1413652 - 1414407 1188 251 aa, chain - ## HITS:1 COG:mll7663 KEGG:ns NR:ns ## COG: mll7663 COG5426 # Protein_GI_number: 13476365 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Mesorhizobium loti # 2 250 3 255 256 292 57.0 3e-79 MQKKILLVGESWTSTSTHVKGFDQFATATWHTGATDFLAALADSPYAITYMPAHAAATDF PLTLEALQEWDAIILSDIGANTLLLHPDTWLKSRRTANRLTLLHDYVAGGGALMMIGGYY SFQGINGGARYRHTAVEKVLPVRCLAWDDRIETPEGCYAEVTESHPLFNDIPGEWPWLLG YNEVEMHPEGKLLATVAGTGHPLLAVREYQQGRSLVWTSDMSAHWLPEEFAKWPGYRQLW INCLDWLTERR >gi|289777623|gb|GG745508.1| GENE 1305 1414422 - 1415501 1303 359 aa, chain - ## HITS:1 COG:mll7664 KEGG:ns NR:ns ## COG: mll7664 COG1735 # Protein_GI_number: 13476366 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mesorhizobium loti # 12 359 13 360 362 478 64.0 1e-135 MKGSIFRHPSPLPVGVSSGYVMTVLGPLPINEMGVTLMHEHILLDASGKWVPPCCCSDRR LAEMPVKMENLGELSLNPLMSRDNCQLFDVDVAIDELTKFRALGGETVVDPTNIGIGRDP KALARIARLTGLNIIMGTGLYLEPSHPEWVKISSVEQLTERLIYDLGGAEEKPEVLAGLI GEIGISSRFTPDEEKSLRAAGRASAATGVPIEVHLPGWERLGHRVLDILEQEGADLRHTV LCHMNPSFADKRYQRELAQRGAFLEYDMIGMSYYYADESAQSPSDEENARAIRELIDDGY IQQILLSQDVFLKTMLTRYGGHGYGYILKHFVPRLRRHGVSGEQLETLMIGNPQRVFGG >gi|289777623|gb|GG745508.1| GENE 1306 1415505 - 1416506 1417 333 aa, chain - ## HITS:1 COG:mll7665 KEGG:ns NR:ns ## COG: mll7665 COG1172 # Protein_GI_number: 13476367 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 24 324 31 330 337 310 68.0 2e-84 MNLSSSRMIQHSLPRRLLHNHSGVVSIALFFVFCCVVFSLITSNFLTGTNWLNIIRQSAP LLIVATAMTLVITTGGIDLSVGSTLALVGALSAIALNSWGLPWPVVLLGGLLLGGFVGAI NGFFIAYEGIPAFIVTLATLAVVRGIALLVTQGYSIPVPADSLFTFIGRAWVVGIPMPAL IGMMILVIGHIVLNHMRFGRYVTAIGANAEGARRSGINTKAVTMKVYIISGMAAALAGMI ITARLGSGSSNQGEGFELQVIAAVVLGSTSLFGGFGTIIGTLLGALSIAVIQNGLILSHI SPFYTQIATGTIILLAIWLNTRILNPTRSAAKG >gi|289777623|gb|GG745508.1| GENE 1307 1416525 - 1417307 178 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 26 227 21 217 223 73 26 4e-11 MQQPQTTPPRVEMINITKTYGSIRSLRGVNLELAPGEVLGLVGDNGAGKSTLTKVLSGAV IPSSGTIRIDGEQQQFTNPADSRRCHIEMVYQDLSLCDTVDVAGNLFMGREPMKSVLGIP FLDEAKMHADAREMLKGLGISIPDTRLLVRNLSGGQRQAIAIARAAAFDPKVLIMDEPTA ALAVAEVEAVLELIRRVSARGVSVILITHRLQDLFLVCDRIMVMYEGTNVADRRVSDTSL SDIVNLIVGEKFTARSAAAH >gi|289777623|gb|GG745508.1| GENE 1308 1417652 - 1418662 1209 336 aa, chain - ## HITS:1 COG:AGl3490 KEGG:ns NR:ns ## COG: AGl3490 COG1609 # Protein_GI_number: 15891864 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 333 1 310 316 232 40.0 8e-61 MSIKRVLLSDVAKLAGLSKATLSRYMNNSIVLPQDTIDRIETAIRELDYRGNSLARRLSK GGSETLGLVLPDITNPFFAELADAAEEAASASGYSLVLCITRNNPEKECQFIRWLDTCQV DGLLFTTNRPDNGLLRKEVQRHERIVLLDEDIPGSKVPKVFADNVQGGRIATEKLIAAGH RHIAFVGGPDKLMSVRERYQGFCTAMEQAGLSWPPEWVMYGDYQREFGQQALRYLFSQPV RPTAVFAASDYLVLGLLDGLRASGLQAPEALSLVGFDDANYADFTQPRISTIRQPARELG RTAVNIMMRLLNDDPDIPAETRLPVEWIGRDSIKIC >gi|289777623|gb|GG745508.1| GENE 1309 1419022 - 1419972 979 316 aa, chain + ## HITS:1 COG:AGl3489 KEGG:ns NR:ns ## COG: AGl3489 COG1879 # Protein_GI_number: 15891863 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 316 12 317 317 356 66.0 3e-98 MLFHTGKLRFLAVATTMLASMSFISAASAAGPTYALVQINQQALFFNLMNKGAQDAAKAS GKDLVIFNSNDNPVAQNDAIENYIQQGVKGILVAAIDVNGIMPAVKEAAAANIPVIAIDA VLPAGPQAAQVGVDNIEGGRIIGQYFVDYVQKEMGGQARLGIVGALNSAIQNQRQKGFEE TLKSNPKITIANVVDGQNVQDKAMTAAENLITGNPDLTAIYATGEPALLGAIAAVENQGR QKDIKVFGWDLTAKAISGMDGGYVTAVLQQDPEKMGAEALNALNSITSGKTVPKTILVPA TVVTKANVDSYRPLFK >gi|289777623|gb|GG745508.1| GENE 1310 1419974 - 1420846 587 290 aa, chain - ## HITS:1 COG:AGl858GM KEGG:ns NR:ns ## COG: AGl858GM COG0524 # Protein_GI_number: 15891858 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 284 1 296 298 221 48.0 1e-57 MRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAAT GNDSNGAWIRQQIKNEPLTLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEI IPHMADAVAGDILLQQGNFSLDKTRALFQYARSRGMTTVFNPSPVNPDFCHLWPLIDIAV VNESEAELLQPYGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLA SALLRGVAPDALALAHASRAAAITVSRRGTLSAFPGSHELAALLTTDGAR >gi|289777623|gb|GG745508.1| GENE 1311 1420873 - 1421718 657 281 aa, chain + ## HITS:1 COG:AGl1705GM KEGG:ns NR:ns ## COG: AGl1705GM COG0434 # Protein_GI_number: 15891857 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 279 1 279 280 367 67.0 1e-102 MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGG VHGLIIENHGDIPFSKPEDIGHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIAL AGGADFVRVNQWANAYIANEGFIEGAAAKALRYRSMLRAEHIRVFADSHVKHGSHAIVAD RSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATEQPLLVGSGVTPANVMQIL GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA >gi|289777623|gb|GG745508.1| GENE 1312 1421718 - 1422362 611 214 aa, chain + ## HITS:1 COG:BH2679 KEGG:ns NR:ns ## COG: BH2679 COG0819 # Protein_GI_number: 15615242 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Bacillus halodurans # 3 214 2 217 224 66 26.0 4e-11 MEAFSERLLREHQPAWQAMQQHPFVTDIEQDRLPTVVFNRYLVFEGNFVATAIAIFALGV SKAPGIQQQRWLIGVLNALVDIQIAWFEQVLSARQIDPAEYPDDLPGVRRFRDGMLRTAR EGSYEQIVTLMFGAEWMYYFWCRRASEHYQSDADLRRWVEMHAEDEFYQQALWLKNELDR CAMALSEDEKQALSALYGEVLQWEIDFHHAAYEE >gi|289777623|gb|GG745508.1| GENE 1313 1422773 - 1424350 1471 525 aa, chain + ## HITS:1 COG:PAB0091 KEGG:ns NR:ns ## COG: PAB0091 COG0747 # Protein_GI_number: 14520360 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrococcus abyssi # 28 505 53 535 556 178 28.0 2e-44 MRISLLSALTLTASFTTHAQDKPVAGGVLTVALGSDTPIIDPSITAYSVTALVTRNVVDS LVGQAEDNSFTPWLAERWEIKNNNREYTFHLRKDVTFSDGTKLDAAAVKYNFERILDPKT TSSYSKSLLGPIDAITTPDEYTVVIRYKTPFAPLLQGLSLPYLGIQSPAYLQKTANTSNT VVGSGPFILESFVKGSGSKLSKRADYNWGPGYATHKGPAWLDKIEFKYLPESAVRLGALN SGQVQVIDAIPPVNYAQVKNNPKLDVITRENPGVPRVLYLNSDTGIFSDLKVRQAFQSAI DRTTAVKAAFFGILKPADNILGPATLDYDPAIASQWGFDLQKARRLLDEAGWQQTDSEGY RVKEGKRLTVQFTYSSNDVEAADVTLFQAIQYQVKQAGFELKLDPVDSGILSSRTAANQY DIISNYFVRPEPDILRTVFHSNYIPPKGNNFSRVKALDSQLETAVGASEAERKRIYYAIQ HQIIDQAWAVPIYIPAYQLGKAKQVQGISWATNAKPNFYDVWIQR >gi|289777623|gb|GG745508.1| GENE 1314 1424331 - 1425290 920 319 aa, chain + ## HITS:1 COG:Cgl2384 KEGG:ns NR:ns ## COG: Cgl2384 COG0601 # Protein_GI_number: 19553634 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 13 317 8 313 313 178 38.0 1e-44 MSGSNAKLLAAGKRLLTIFAVLWGAATLTFVAVKLIPGDPVAILIGSANSVVDDSFRETL TRQFGLDKPLWWQYLRYCGEALTGNLGVSYQYRQPVVQVISAALKETVPLAVSALALALV LAVFNALLTAGRHPRLRSLLAGLELMLLSTPVYWIGIVLLSIFSFKLQWFPVTGNDGWIA LVLPVVTLSLPLAATLSQVLRDGLEEALSQPFAMTVRTRGVSETALRLRHALRHASLAVS TLTGTLLASVLGGSILTETVFGRAGLGQITLGAIENRDMPLVLGVVMFSALLFVVINLLI DTLYLLIDPRLRLRGHADE >gi|289777623|gb|GG745508.1| GENE 1315 1425283 - 1426146 759 287 aa, chain + ## HITS:1 COG:BH0030 KEGG:ns NR:ns ## COG: BH0030 COG1173 # Protein_GI_number: 15612593 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 30 274 45 288 301 193 42.0 4e-49 MSDLLLRVARRDGGRYRNPWLAPGTSIPLLLVLLLVVAVFFPSLFTPYTPEQMDFSAILQ PPDLRHWFGTDQLGRDVFTRVVYGTSLSLSIGVGATLIASAGGIVLGTLAGLAPRAVRQL LVRLLDIMLAFPDLLLALLAITVLGRGPENTLQAVGLAGIAGYARLVRAQVLQVRLSGYV QHAVALGEPPMVIILRHIVPNTLRPLLVLATVGIGYSILSASALSFLGLGVTPPTAEWGA LLSEGRNFLDSAPWVSLLPASVVALSVIAITLLGRRVQTLIAKGGIA >gi|289777623|gb|GG745508.1| GENE 1316 1426143 - 1427807 488 554 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 319 551 35 267 329 192 43 4e-47 MTSETFQQPLLQVAQLSVSFPSPQGLIEAVNALSFDVHAGEVLALVGESGSGKSVTARTL VGLAGAGAAVRAESLILHGHDGLSQNLLACDARRWQQLRGREIGFVLQDALTSLDPLRRI GQEVAEPLLTHRLERGAAVRERVAELLTQTGIPDPHNRMAQYAHELSGGLRQRALIASAL AAGPRLLIADEPTTALDATVQKQVLNVFRALADAGHGVLLITHDLSVVADIADRVVVMRQ GKAVESGKVRQVLHAPQHPYTRRLLAAIPSAGTRGKWLTGNDPLGQTVVRENISIDSTTP VLAADNVSLAYVLPDGRRLQAVNQVTLEVAQGETLGIVGESGSGKTTLGKLALALQAPQQ GEILLAGQPWSRLTERQRQPLRARIQTIVQDPLGSFNPQYNVAQLLQQPLRLHTTLTAAD RLSRAQALLALVGLSPDLLTRRPATLSGGQRQRIAIAQALACEPDILICDEPVSALDVTT QAQVLDLLVALQRRLHLSMLFISHDLGVVQHMSHRIAVMKDGEVVESGSVDQIFRAPRHP WTRQLLSAVGQTPL >gi|289777623|gb|GG745508.1| GENE 1317 1428002 - 1429540 1605 512 aa, chain - ## HITS:1 COG:PA5160 KEGG:ns NR:ns ## COG: PA5160 COG0477 # Protein_GI_number: 15600353 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 13 512 12 509 509 620 64.0 1e-177 MSEPKAAFTPPSLFLATLALSLATFMQVLDSTIANVALPTISGNLGVSADQGTWVITSFA VCNAIALPLTGWFTRRFGQLRLFIASVMFFTLTSFLCGFAHSMTELIIFRALQGFFAGPM FPMCQTLLLVIFPPMKRSMALALLSMVTVVAPIVGPITGGWLTDNYSWPWIFYINVPIGI FASIVVWSQLRMREETTQSSPVDYIGIALLVLGVGLLQVVLDKGNDEDWFSSTPIIVMSI VSAISLICFVIWELDERHPIVNLRLFKDRNFAIGTLALMLGYAAFFAINIILPQWLQTQM GYTAIWAGLAAAPMGFLPLVLTPVIGRYATKVDLRILCSVSFLTMGASCLMRAQFNTDVD FRTIASVQMFMGIGVAFFFMPLTTIVLSNLHGNEVAEGSGLATFFRVLGGSFASSLTTWI WQRREVFHHANLTESVTQYNPAAMDYVNKMGGPTQQHLAMIDQVVTQQAYMMSTIDYFWV LGWGFMALIIIIWFTRPPFVKSGMPGAPATGH >gi|289777623|gb|GG745508.1| GENE 1318 1429551 - 1430729 975 392 aa, chain - ## HITS:1 COG:PA5159 KEGG:ns NR:ns ## COG: PA5159 COG1566 # Protein_GI_number: 15600352 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Pseudomonas aeruginosa # 1 385 1 383 394 436 57.0 1e-122 MSMENNAPPSDKRPGKRTRNFAILLLILILAAGGCLAWYLLYARYYESTDDAYVNGNQVT LTPQITGTVTQVTVDEGDYVEKGQPLVLLDPSDTAIALQQAEANLASTVRQVRGLYSTAD NYRAQVAAKKVALQTAKSDYLRREKIVSSGAIAVEDLAHYRDAVTSAQSDLLAAEQALKT NQAMVDDTVVDNHPEVKTAVATLRQRYLDNSRSTIVAPVSGYVAKRAVQLGMRVTSGTTL LAIVPLNEVWVDANFKESQMQDMRIGQKVELNADLYGDNVKYHGTIESLGIGTGSAFSLL PAQNASGNWIKIVQRLPVRITLDPHDMQKHPLRVGLSMNAEVDIRNQGGHLLPQKTVEQP RFRTDVYETPMEAADKLVAKILHDNTSAVAQR >gi|289777623|gb|GG745508.1| GENE 1319 1430745 - 1431227 534 160 aa, chain - ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 10 152 1 144 144 90 37.0 9e-19 MLITDQAAIMNTPIDSSHKNLHLGLLFHLANQFKDLLIGHYFADSGITAPQFKVLINIFK GNTSPAEICKSLQMDTGAMSRMVARMVKNDLVERRPNPHDKRQVILALTAKGQTLCNTFQ NEALNTILADLTARLTPEESRQLADILIKMLPDEFTAPHR >gi|289777623|gb|GG745508.1| GENE 1320 1432322 - 1432837 -140 171 aa, chain - ## HITS:1 COG:no KEGG:Dole_1262 NR:ns ## KEGG: Dole_1262 # Name: not_defined # Def: hypothetical protein # Organism: D.oleovorans # Pathway: not_defined # 3 164 363 528 535 121 35.0 1e-26 MLHFKTVLERRIDQISGIDTSLKRYLVRALNDLPVEPKMFLTNVRGIVDCVFDLIWSVEI PDRQIPARWIQVWESNNEYDIDKFKNGFPQGGRRVMLLRLMTGTEKSRACAKYITKETCV LMDAAHEFGNFGQHQNGAEFNAGSAYSVLLICIELSVALTRDIGLSLIKLT >gi|289777623|gb|GG745508.1| GENE 1321 1433901 - 1434113 111 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290509518|ref|ZP_06548889.1| ## NR: gi|290509518|ref|ZP_06548889.1| N-6 DNA methylase [Klebsiella sp. 1_1_55] N-6 DNA methylase [Klebsiella sp. 1_1_55] # 1 70 1235 1304 1304 139 98.0 5e-32 MIQSGIEITDEALDIDLTYLRELELIEFSGDLYDSEYALTIPLMADWIEQHQDADVIVSQ ARTESEEENV >gi|289777623|gb|GG745508.1| GENE 1322 1436808 - 1437023 119 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEKGSGRKSNNSLNSTFLKQILSEFSVCASPKQKAIRDNNSCASLCFQAGKYVLYKLTC TVRIRKQKFIF >gi|289777623|gb|GG745508.1| GENE 1323 1437678 - 1437752 60 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIILFLKESDSLSLGIVYINPPQQ >gi|289777623|gb|GG745508.1| GENE 1324 1437952 - 1438188 148 78 aa, chain - ## HITS:1 COG:no KEGG:Dole_1258 NR:ns ## KEGG: Dole_1258 # Name: not_defined # Def: type III restriction protein res subunit # Organism: D.oleovorans # Pathway: not_defined # 9 76 715 782 787 76 52.0 3e-13 MSWLENEGSTASIKLQVWQTALDHYCLFGIDDLENAQIYMTPPFTQQFGSFPEMARRYGG AARLREDFEKIKELLYTS >gi|289777623|gb|GG745508.1| GENE 1325 1441075 - 1441860 560 261 aa, chain - ## HITS:1 COG:RSc3065 KEGG:ns NR:ns ## COG: RSc3065 COG3713 # Protein_GI_number: 17547784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Ralstonia solanacearum # 32 261 29 261 261 114 30.0 2e-25 MIAIKKALYMTVPLLTAMTSCVQANDDTSSGTFTIGLGGHYTPRYSGSDKQVWQVVPVLQ GRNGAFFIDTQKGVGYDLQNASGWYFEHTLGYDLGRADKNVSWRAGANNLKGMGDIDASL NTALAVGWQALSWLSVEGKATLPLTDSQGVSYQASLTLLPVQTDHDTVAFQTAALFGDNR YLNTWYGVDPQQSQRSGYSRYSAPGGFYGIDNSLTWSHQFDAHWGTLLSADYTWLGEHAN ESPIVLRRNEAALTAAVIWTF >gi|289777623|gb|GG745508.1| GENE 1326 1441985 - 1442680 456 231 aa, chain + ## HITS:1 COG:RSp0314 KEGG:ns NR:ns ## COG: RSp0314 COG0745 # Protein_GI_number: 17548535 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 6 228 29 252 256 184 47.0 1e-46 MLSRRVLIIEDDADAAGVLEAYLRRENYDVVITGDGLSGLDMAHRWKPDLILLDVMLPGL NGTEVLAGLRRKNDVPVIMVTAMGDTPDRIGALRYGADDYVVKPYHPGEVVARVQAVLRR SNQTETKEEILRWQSLEVNVAAIVASIVDGDTTPRTLDLTPTEFSLLTTLMRSPSRPFSR QHLLEHCLPESEALERVVDTHIYNLRKKLEAAGISGVLVNVRGVGYRFRQP >gi|289777623|gb|GG745508.1| GENE 1327 1442677 - 1443873 673 398 aa, chain + ## HITS:1 COG:RSp1162 KEGG:ns NR:ns ## COG: RSp1162 COG0642 # Protein_GI_number: 17549383 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 89 395 203 507 512 159 32.0 1e-38 MTKTRYSSLWRWICARILALAIGSVIVIATCMWLRYAVQNYWNLGRMPVSVRQEFLALSQ NPQANPARFHQIVDTWWGLSYSTPSIASADWVTVALLVLVMIPFIVVMGLRYARPLALQF SRLRDAAKDVAEGQFGRQAELIRNAPAEMVSFASDFNAMTGKLARYEKELRTSHVAMAHE LRSPLTAAIGRLQGMLDGVFDASPEQLAMVMKQLQHLNRLTDELHLLSLSDAGNLVLENE PFRLDELLKERATWIMPQADAHRFTIRLHHSQACPFKGDTFRMGQVFTILMENALRYGRD GGHLDVTLHYASGQYCLEFRDDGPGVSSQFLPEMFNRFSREEQSRARHSGGSGLGLSIAR AICQAHGGSISASLPETGGLAVTLLLPWTSSEMENSRS >gi|289777623|gb|GG745508.1| GENE 1328 1443952 - 1445100 591 382 aa, chain + ## HITS:1 COG:PA0157 KEGG:ns NR:ns ## COG: PA0157 COG0845 # Protein_GI_number: 15595355 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 39 375 14 349 356 188 38.0 1e-47 MSDEFLLSLRHSLHHLYDVARTLSWLHFLPLTILSVVIFLLPGCGDNQGNTTDPVRTVRY VVVGSAQTLPALERTGEIHAHDETILSFRTGGRIVTRSVDIGDRVNAGQLLATLENTTSQ NQLDGAQADYEGAKASAQVAALNVNRMQKLMPTGAIARTQLDTARADWLVARARLKNSES ALRNARESLGWTRLIAPRSGVITEVSASAGQVVNGGQSVLTLATGEALDVVFDIAKPEAI PPQEQAGLRVSLLSDPSVQASAAVRDISPQADPQTRTWRVRATLQNPPLAMALGASVTVT LPATGPHGYALPASALSRVDDKPAVYVINPQSQAQLRVVVPAYYTATSVIISGGLEPGDR VITAGVSKLRSGEPVIAGECES >gi|289777623|gb|GG745508.1| GENE 1329 1445097 - 1448222 1537 1041 aa, chain + ## HITS:1 COG:mlr2404 KEGG:ns NR:ns ## COG: mlr2404 COG0841 # Protein_GI_number: 13472190 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Mesorhizobium loti # 8 1007 4 1005 1034 968 50.0 0 MKPVLNEKFNLSSWALNHQQMVSFFMLLIIAMGAFCYENLPRNEDPAFTIKTAVVSAQWP GASVTDTTRLLTDTLEKKLQETPWLDYLESETRAGSSVIHVNLRDDTPPQKVPDIWYQVR KKMQDIAPSLPEGVQGPAVDDEFDDTYGTIYGFIPEGYTLREVRDRVETIRRELMSLPDI GKTSLLGEQQEQIVLSFSPARLAGMGLNIQQVADALRAQNAVVPAGMIRTGQENMAIKVS GELTSEASLRAVTLHINDRYLPLTDIATVSRENAEPPQPVYRVNGKPAIGLAISMAPTGN MLRFGAALNAKMQAISVTLPHGIEMVKVADQSAVVSDAVSGFIRVLIEAVAIVLAVSFVS LGLRAGLVVAAAIPLVLAMTFTGMMLAGIGLQRISLGALIIALGLLVDDAMITVETMVSG LEAGDSRRQAATRAFKTTAFPMLTGTLVMIAGFIPVGFAASSAGEYCFSLFAVVLIALLC SWVVAILFSPLTGTWLLSDNIRQKAEGPGRMARGYQWLLRKALRHRFATVCLALIALGLS VYGTTFMQGEFFPASDRPELLVSLTLPANASQSETQNTAEKLEKALAGNRNVERFSTYVG SGAIRFYLPMDVLLANENIAQIVVVAKDLKARDRLHRQLNRILATGFSDIITRVSPLELG PPVGWPVKYRVSGPDYLKVRSIANRLSDVIGRSPSSREVNQTAGEPERVITLKVNQTAAR ATGVSSESLARMLNTVWSGSIVTSVRDNDRLVDVVLRARDNERLNLATFSSLTIQGNDGK QIPLSAFATPVWGVDDPVIWRRQRLPFITVQTDLAPGLRAEAVSAALRPAVDRLRAELPE GYSIEEGGAVAESEKGNSSVYAILPVTLVIMLLLLMLQLRNYSRMALAILMAPFGLPGIV LAMLPGGTPMGFVALLGVIALAGMIIRNAVILISEVDSNLAQGMASDAAIIAAAEHRARP ICLTACAAILGMIPISHQVFWGPMAYAIIGGLLVATLVTLTVLPASFSLLLHLRMTSSGE FTASSAAESEEKCRRLCGRHG >gi|289777623|gb|GG745508.1| GENE 1330 1448158 - 1449102 704 314 aa, chain - ## HITS:1 COG:PA4070 KEGG:ns NR:ns ## COG: PA4070 COG2207 # Protein_GI_number: 15599265 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 20 307 11 307 316 70 27.0 5e-12 MQSAGSLHYSTVGVTESRRFEYWNDVVLRHCIPAASAPLAGVDFDARLTVRGVGLVDMCS LSAPLHRWDRTARYLRQGPDDDLWLGYMQDGYGQLEQGGRKATLAADSLVLYDAAQTFRF SLGGRDNHLVRIPRHLLSCHLPGVEHLTAMVLDDRRPGVIPLREMLRQAAAMPACLDTAD ISGRFSQTLLDLLVLSLELQDLNNVGVERDLYYRMMNYIRRQLVDPDLNIESLARAHHVS VRTVTRAFARHKKTPMAVIWQERLQASREAIERGRVSSVSQAALDFGFSDFSHFSHAFRK AFGISPRSLLPKKQ >gi|289777623|gb|GG745508.1| GENE 1331 1449520 - 1450413 933 297 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2625 NR:ns ## KEGG: Kvar_2625 # Name: not_defined # Def: QbdB protein # Organism: K.variicola # Pathway: not_defined # 1 297 1 297 297 580 99.0 1e-164 MTFSNATFRTSLAACTLWLATGPAHAVDLNSQDLIPAPAGTDAVLGYFTYATRDSFTPTG GGELKQETGLDSFVSIFRYVHYMDVGGFTVAPQVLLPYGRLYNGSLNGVRLDSASGLGDP ILAAPVWLVNNPSTTFAIVPYLYLPAGSYDAGRTLNVGENRWKFDLQLGGVQQLGNGFAT QLSTDVMWYGVNDDASGIGTGRLKQDNTYQFQGWVTWTPPADKSWTLAAGYSQYWGGKQQ LDGIENGQATRVDQVRLELSKLVTPTVQVQGLLQRDLNVDGGFKEDLHTTLRVMKLF >gi|289777623|gb|GG745508.1| GENE 1332 1450474 - 1450956 467 160 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2626 NR:ns ## KEGG: Kvar_2626 # Name: not_defined # Def: globin # Organism: K.variicola # Pathway: not_defined # 1 160 1 160 160 339 100.0 2e-92 MTDQQQKPTLYERLGGYDAVYAFAGEVLKTCMKHPDIGHIWAHVSESSFQKEHINFVDFL CKHWGGNTVYRGRDMVTAHRGMGLTEVHWKAVFEAIDECYENFNVPQDIREEVTAFLTQF KPAVIGSPSYRDVVLAHPDMDVTKGMKSVGIHWPKTDKPS >gi|289777623|gb|GG745508.1| GENE 1333 1451093 - 1452607 1382 504 aa, chain + ## HITS:1 COG:SSO2122 KEGG:ns NR:ns ## COG: SSO2122 COG0154 # Protein_GI_number: 15898906 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Sulfolobus solfataricus # 1 496 1 500 504 442 45.0 1e-124 MAIERPTIEQLQALASRLNIRLTPAQAEEYLALMQANFDAYDLIDALTDEIPAVHYPRAA GYRPEGDENPLNAWYYKTEVTGAATGKLAGRTVVLKDNIALAGVPMMNGASTLEGFVPLY DATVATRLLDAGATILGKATCEHFCLSGGSHTSDPAPVHNPLRRGYSAGGSSSGSAALVA SGEVDLAMGGDQGGSARIPAAWCGLYGLKPTHGLVPYTGIMPIEATFDHTGPMTRSVKDN ALVLEVIAGADGLDPRQYAPKVEAYTEALGKGVRGLKIGIMAEGFQLPNLDARVAEKVRA AVARLQELGATVGEISVPEHSLAGALWSPIGCEGLTAQMMHGNGMGFNWKGQYDVALLDK HAQWRDNADALSPSLKICMFVGQYGLERYHGRYYAKAQNIARRARAGYDRALADFDLLVM PTVPLVAQPLPEPDCSITEYISRAFEMIGNTAPQDITGHPAMTLPCGLVDGLPVGMMLVG RHFAESTLYQAAAAFEASGDWRMF >gi|289777623|gb|GG745508.1| GENE 1334 1452632 - 1453240 778 202 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2628 NR:ns ## KEGG: Kvar_2628 # Name: not_defined # Def: nitrile hydratase, subunit alpha (EC:4.2.1.84) # Organism: K.variicola # Pathway: Fluorobenzoate degradation [PATH:kva00364]; Tryptophan metabolism [PATH:kva00380]; Cyanoamino acid metabolism [PATH:kva00460]; Aminobenzoate degradation [PATH:kva00627]; Styrene degradation [PATH:kva00643]; Microbial metabolism in diverse environments [PATH:kva01120] # 1 202 1 202 202 399 100.0 1e-110 MSHQHDHDHTEPPADIELRVRALESLLQEKGLIDPAALDELIDTYEHKVGPRNGAQVVAK AWSDPEYKRRLLADATAAIAELGFSGVQGEDMQVVENTPDVHNVTVCTLCSCYPWPVLGL PPVWYKSAPYRSRIVIDPRGVLAEFGVNIPESKEVRVWDSSAELRYLVLPERPAGTDGWS EAQLIELVTRDSMIGTGLVAAP >gi|289777623|gb|GG745508.1| GENE 1335 1453256 - 1453909 781 217 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2629 NR:ns ## KEGG: Kvar_2629 # Name: not_defined # Def: nitrile hydratase (EC:4.2.1.84) # Organism: K.variicola # Pathway: Fluorobenzoate degradation [PATH:kva00364]; Tryptophan metabolism [PATH:kva00380]; Cyanoamino acid metabolism [PATH:kva00460]; Aminobenzoate degradation [PATH:kva00627]; Styrene degradation [PATH:kva00643]; Microbial metabolism in diverse environments [PATH:kva01120] # 1 217 1 217 217 439 99.0 1e-122 MNGIHDLGGMHGLGPILNEENEPYFHHEWERRVFPLFASLFVGGHFNVDEFRHAIERMDP AHYLEASYYEHWLHAFETLLLEKGVITADELWGGSTPAPCAPGTPVLTQDIVAMVVSTGA SARVSHDIAPRFKAGDRVRAKNINPTTHTRLPRYVRGKIGRIETDHGVFITPDTAAHGLG EHPQHVYSVSFTALELWGTPRSDNVYIDLWDDYLEEA >gi|289777623|gb|GG745508.1| GENE 1336 1453906 - 1454373 288 155 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2630 NR:ns ## KEGG: Kvar_2630 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 155 1 155 155 288 100.0 4e-77 MSIATQHDYAAVGLPRDEEGPVFDKPWQAKAFSLIVHLHRAGLFPWAEWVRTFSEAIKAA PAQPGESVNDAYYRQWATAMENMITALHLTAPDDIARRTQEWRLAYINTPHGQPIVLANA SCPPAHNHHSLPLGVPVTVSPAQSSISQINNGVTS >gi|289777623|gb|GG745508.1| GENE 1337 1454370 - 1454579 307 69 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2631 NR:ns ## KEGG: Kvar_2631 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 69 1 69 69 105 100.0 5e-22 MSDITLTTNTPATPIPVAALLPWALFTTLLALLAIYFVGAEQGATSMFSGTQVHEFFHDA RHLLGFPCH >gi|289777623|gb|GG745508.1| GENE 1338 1454590 - 1455345 501 251 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2632 NR:ns ## KEGG: Kvar_2632 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 251 1 251 251 431 100.0 1e-119 MIGKLLFKGMIAGILAGLVAFAFAHHFGEPQVDRAIGIEESLATHSHQHSASADGGEEEV FSRQTQSGIGLMAGMVLFGAALGGGLALSWAFSYQRFGPSNPRLLALGLALVGFLVMSLM PGLKYPPNPPAVGNPETIGYRTELYFVMMLLSIGIVIAAAWLSHQLIPRLGRGNAMMWAT LFAVALMLVVCALMPTVNEVPEHFPADLLWRFRISSFGTHLVLWSVIGVAFGALAERTPA TGVQRPAFRRG >gi|289777623|gb|GG745508.1| GENE 1339 1455352 - 1455939 -30 195 aa, chain + ## HITS:1 COG:mlr0406 KEGG:ns NR:ns ## COG: mlr0406 COG0406 # Protein_GI_number: 13470640 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mesorhizobium loti # 1 177 1 179 197 127 43.0 9e-30 MRASLTLICQGETAASRGSHFPCDDPLEAREWQRARQLQSRVARCHRVWISPETAARQTA AALSLQGTPVMELAEPDYGIWAGRPVREVMTQDADAFLAWLEGDPPPGGESRAQLLARCG RWLAKHVDIPGRHGVIASASTIRAMILNVLGAPLHSFARIDVHPLSITELRSDGRRWNFC LLRDDIKGECSTVSR >gi|289777623|gb|GG745508.1| GENE 1340 1456120 - 1457589 1056 489 aa, chain + ## HITS:1 COG:YPO4014 KEGG:ns NR:ns ## COG: YPO4014 COG2267 # Protein_GI_number: 16124137 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Yersinia pestis # 6 481 9 483 487 686 70.0 0 MKWVTWLKRIVLSLLLLIVGALGLRLYDIQRGPELQLWHTWVPHEMDADEIDNADWNDYI NKENALFSEVKRQVTDKLDAEQQTELNRYYSHSPIYPDSFPTNWNRSYIMMPDGKPKGAV VLLHGLTDTPYSLRHIAENYRQQGYVAIGIRLPGHGTVPAGLTDVDWQDWLAATRLAVRE AKRLTGNDVPLHIVGFSNGGALAMKYSLDALDNAELAKPQRVILISPMIGITSFARFSGL AGWPAFLPAFSKAAWLNIMPEFNPFKYNSFPTNAARQSFLLTKALQKQIVTDSRNHRLNS LPPVLTFQSVVDSTVSTRAIVTALYNRLPENGSEIVLFDLNHAVRFNSLLRRTSYTALAR LLTAPPRAYQTTIITNANSASTDMEIRTTPAGKTDTTVEKLQGMRYLPDVYSLSHVALPF PLSDSLYGRYPHPLNQYGISLGTFAARGERSVLVVGLDSLMRQSSNPFFPYMIKRIDEGI DTRPALSGK >gi|289777623|gb|GG745508.1| GENE 1341 1457642 - 1458517 1055 291 aa, chain - ## HITS:1 COG:NMA1773 KEGG:ns NR:ns ## COG: NMA1773 COG2084 # Protein_GI_number: 15794666 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 6 282 8 283 289 125 30.0 1e-28 MSTLPKVAVLGLGAMGHAFASNLLKKGFTVAGWNRSPARGEDLQAQGLSLHTTPQQAVAD AEVIISMLADGQATLEVLAQIAPACQPQAIYCQMGTIGLPETQEAIALLRALQPAMTFVD APVSGTKAPAEKAQILVLASGDREKCAAAEQVFAAISRGTQWFGEAGNSQKMKLVLNAWL ISMMQGIAESAQLAKTLGFTPDQLWSALEGGPLAAPYVKVKLDAIASEQFAPQMQLAHAL KDARLALSLAEPHTMPGLDNIAELWQQAADAGYAGQDLSAVYQWLSTSAKA >gi|289777623|gb|GG745508.1| GENE 1342 1458630 - 1459265 505 211 aa, chain - ## HITS:1 COG:BMEII1077 KEGG:ns NR:ns ## COG: BMEII1077 COG0583 # Protein_GI_number: 17989422 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 1 210 84 293 294 146 38.0 2e-35 MNAFARGQQGTLRLFANTSAMSAFLPGKLAAWMAAHPAVQIDTEERTSADIVSSILAGVA QAGVVSDAVDPGPLHLDPVADDPLVLIVPPTHPLAGANEVAFAAVINEPLVALYQTSALQ QHIEQHAAGLGQALNVRVRMSHFEGLCEMVAHGAGGAILPRVIAERYQQRYRFAVIALQD RWAQRRLCLCYQDDARLTPAMRRLLAWLRQP >gi|289777623|gb|GG745508.1| GENE 1343 1459627 - 1460370 803 247 aa, chain + ## HITS:1 COG:AGc4214 KEGG:ns NR:ns ## COG: AGc4214 COG0730 # Protein_GI_number: 15889593 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 245 35 274 276 213 58.0 2e-55 MFDLHIFYLLLIFIAAGLVKGVTGMGLPTVAMGLLGLLMPPQAAAALLVLPSLLTNLWQL LAGPALAQIVRRLWLMMTGIIMGTLAGSSLLISLNPRCSALALGTVLIAYAGYALCGPAL QVSARVEKWLSPLMGGLTGVITGATGVFVIPAVPWLQTLGFRRDELVQALGLSFTLSTLA MAAGLSLHDGWHADSLLLSGLALLPALLGMWLGQWIRSRLSPRRFRQGFLLFLLALGMEL IARGWLT >gi|289777623|gb|GG745508.1| GENE 1344 1460376 - 1461197 922 273 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 42 273 1 232 238 176 42.0 6e-44 MARFIDELVLKFSLKFKNNLLFTLSYSLICLTSATLARHLKVIYKKIVTELKARINSDDY AVGDMLPSEKALAAELQVSVMTLRKALALLEEEKLIARRHGSGTCIVRKSNYHGGELEGF NYQMQVVGVTNYRNKVIEFTLLDAPPAIAQQLKIQPGEKVYYVRRLRLIDEVPILVENSY IPFATFPWLSVGNLEQSKFNYFKKECHITIIESHRSYTPVLATREQAELLQVAPNSLLLR VQSVSYAQNRAIVDFSEIYQNTSKYNVKHITRR >gi|289777623|gb|GG745508.1| GENE 1345 1461330 - 1462868 2117 512 aa, chain + ## HITS:1 COG:CAC3425_1 KEGG:ns NR:ns ## COG: CAC3425_1 COG1263 # Protein_GI_number: 15896666 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 8 425 10 424 440 337 43.0 4e-92 MIGVKKLQDFSKAMIGPVLYLPAIGLLIALFSMTTNRLWVDESSALYLLGKFVSSMLWAL MNHLGFLFCLGLASGLAKTRKAEAAFVAAMTWLVYLAANNSWLTLTHRLASGATNAQLYG SGQTFIFGFQVIDMGVFLGIILGCAVAFVHNRVVGIEFRGALSIYGNSKLVLIVMLPLVG LFAIATVYLWPVVELGISALTGFMKSFGAIGVFLYGFLNRFLIPTGLHHLIWSPFVFTSI GGQLLIDGQTVIGAKPIFLAEIARHPIGALSDSARFLTYGMVKIFGTAGMALAFYRTAKP ENKQRLKVTLIPLIVTSVLVGITEPFEFLFIFTAPLLWLIYSLLDGFFQMLAWLLHVRVC ATNGLIDFVVYNLPAGASVTRWPVFVALGLLETATMYLVGTFCITRLRMLTPGREAAADA EPSEQTGQASEIADKGTLVIAGLGGKENVCVVENCFTRLRVDVRDPALIQQSLLKESGGS SVLIKGNHVQVIYGLGVNKIRTAVNASLGVTE >gi|289777623|gb|GG745508.1| GENE 1346 1462880 - 1464208 1848 442 aa, chain + ## HITS:1 COG:CAC0533 KEGG:ns NR:ns ## COG: CAC0533 COG1486 # Protein_GI_number: 15893823 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 5 442 4 441 441 646 67.0 0 MKDNFVVTIAGGGSTYTPGIVMMLLENMSRFPLREIRLYDNHHQRQKTIGDACAILVAER FPQVKFSYTTDPQAAFTDVDFVMAHIRVGLYEMREKDEKIPLKYGVPGQETCGPGGIAYG MRSIAGVLELVDYMQQYAPNAWMLNYSNPAAIVAEATRRLRPDARIINICDMPVAIEGLF ADILGLPSRKALNVRYYGLNHFGWWTRITDKAGNDLMPALKRHVAEQGYSSPKEDFQHKA PSWIETFKKVKDVFALDPSTLPNTYLKYYLYPDYEVAHADPDFTRANEVMAGREKEVFDM AREITRRGTAEGAHFHAGAHATFIVDLACAIAFNTQERMLLIVENNGAIANFDETAMVEV PCLVGVNGPEPLAMGKIPSFQKGLMEQQVAVEKLVVDAWVEGSYQKLWQAITLSKTVPSA AVAKAILDELIVANEGYWPALH >gi|289777623|gb|GG745508.1| GENE 1347 1464187 - 1464288 69 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVWPAGTLGKNAEKGDPLHFTHHEKDQCSAGQ >gi|289777623|gb|GG745508.1| GENE 1348 1464940 - 1466385 1766 481 aa, chain + ## HITS:1 COG:Cgl0181 KEGG:ns NR:ns ## COG: Cgl0181 COG0477 # Protein_GI_number: 19551431 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 12 463 26 477 491 383 47.0 1e-106 MSFITNLNQQQRKRLHQITLVATFGGLLFGYDTGVINGAFSSLKQYMALTPTTEGLVMSV LLIGAALGSVFGGKFADFFGRRKYLLFLSFIFLIGALLSAAAPDITTLLIARALLGYAVG GASVTAPTFISEVAPTEMRGKLTGLNEVAIVIGQLAAFAINAIIGIIWGHLPDVWRYMLL VQAIPAVCLFVGMWRAPESPRWLISKNRHEEALHILKQIRPAERAQKEYDDISTLIKIEA GNKYSAQGTFTTILKTPWILKILLVGITWAALQQTTGVNVIMYYGTEILSAAGFSERTSL ICNVLNGVFSVGGMLIGVLFLVDRFKRKTIIIYGFAIMATLHLIIAAVDYTLVGDLKATA IWLLGALFVGVMQGSMGFITWVVLAELFPLKFRGLSMGISVFFMWIMNAVVSYLFPLLQA KLGLGPVFFIFAAINYLAILFVVFALPETSNKSLEQLEEELSSNHEGKKSTRLTREVGYD R >gi|289777623|gb|GG745508.1| GENE 1349 1466375 - 1466818 453 147 aa, chain + ## HITS:1 COG:ECs3061_1 KEGG:ns NR:ns ## COG: ECs3061_1 COG4668 # Protein_GI_number: 15832315 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Escherichia coli O157:H7 # 5 127 4 126 284 107 39.0 1e-23 MIDNITLDNLHIGCKASNKAEVIAMIGAECKAKGYVNQECVHFLLEREHQVSTFLGNGIT LPHLPKSATDIILKTGIEIFQFPDGVIWDRSNVMFIAIGVIAKEKEHIDVLKEIASIFSD ELIANALSLISDKNDFLKILQHNALPH >gi|289777623|gb|GG745508.1| GENE 1350 1467194 - 1467490 158 98 aa, chain + ## HITS:1 COG:no KEGG:KP1_2728 NR:ns ## KEGG: KP1_2728 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 98 5 102 102 152 89.0 3e-36 MVLRLGYFFSRPSSLWGWLMCNALNGIAIVLCFRAISIVTGFSEVVWQVIITLAIIISTW YSANYFAALEARRDKRRFLLLAWVVITILLNFIHLGGG >gi|289777623|gb|GG745508.1| GENE 1351 1467515 - 1467655 211 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLAMLWVLISHHKGLTLLLIVVIALVLIALIPLVKRLLRSINGDP >gi|289777623|gb|GG745508.1| GENE 1352 1467845 - 1468771 818 308 aa, chain + ## HITS:1 COG:STM2776 KEGG:ns NR:ns ## COG: STM2776 COG2819 # Protein_GI_number: 16766088 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 23 307 22 311 311 276 50.0 3e-74 MKRNSGSIRARGLLTLAVGVLFYSSGSTARPDLQPLGPNIADKGSAYYHFTQRQYDSADG ERHYRVWTAVPDKAPPAAGYPVLYMLDGNAVMDKLNDALLQQLSAGSPPVIVAIGYQTTL PFDTAARAWDYTPPLKAFKPQVGKPALPPRKTGGNDLFRQLLTETMVPQTEANLKIDPHQ RAIWGHSYGGLFVLDAWRKTSLFHLYYSASPSLGQAQESPLKGSEALSATAFSGKSLYLL EGDGKAAREPTGHVASLSLLRHTQQQLADKGLTVAFWRYPGMTHGQMFDVSLQSALLHLS GQAPLAHQ >gi|289777623|gb|GG745508.1| GENE 1353 1468805 - 1470460 1852 551 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 112 541 322 749 776 294 38.0 4e-79 MSNDHLTDIAYRHFIESVKDYAIYMLSTDGTVISWNEGARRAKGYLSDEIIGCYFGLFYS EAEQLSGVPAKNLEIALRSGQFEGEGWRYRKDGSRFWAHVMIDTIRDEQNTLLGFAKITR DISEQKAINDRIAWMARYDALTGLPNRVEFFERVEKLITGNDARRFAIFTIDLDKFKEIN DLQGHLIGDQLLQRVAGAVLKTLQKEEMVARFGGDEFVAVKPFADEGEVDAFAARLWHCF SGKQTFAATEVVLSASIGISVYPEDGTDINTVLSNSDLAMYRAKSSLDHKICWYEREMDD KTRQRNMMAADIRRGIHAGEFSLHYQAIRNIKDRRITGYEALLRWQHPQLGPIPPDVFIP IAEESGAIVPLGYWVLEQVCNESLEKGLNRKVSVNISPVQLRHRSFIEKVREILMRTAYP VSLLEFEVTETAFIINKQLAFSVLHHLQKMGISIALDDFGTGYSSLSMLRDFHFDVIKLD RSFMLDVESNPQVRSFVRAIISLGNSINTPLIAEGVETAGQLQILEEEGCDEMQGFLFGE PVDIKHLPPSS >gi|289777623|gb|GG745508.1| GENE 1354 1470757 - 1471005 293 82 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2647 NR:ns ## KEGG: Kvar_2647 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 82 1 82 82 138 100.0 7e-32 MLRDYLKVEKEDQLVEQQSRHDNSQHYSAVTEWVILSKDGQRKGRVSLFDRFTTRRSWSD SFRITQFDNAGKVVVDKLTDAL >gi|289777623|gb|GG745508.1| GENE 1355 1471315 - 1471533 317 72 aa, chain + ## HITS:1 COG:no KEGG:KP1_2722 NR:ns ## KEGG: KP1_2722 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 72 43 114 114 136 100.0 2e-31 MGIVKISDLLHDDIRDASKAMSRSVNAQAEYWIRLGMMSELYPELNHQQIKLLMLKSGSD RLLEVINAINNH >gi|289777623|gb|GG745508.1| GENE 1356 1471514 - 1472296 910 260 aa, chain + ## HITS:1 COG:PA2748 KEGG:ns NR:ns ## COG: PA2748 COG0024 # Protein_GI_number: 15597944 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Pseudomonas aeruginosa # 5 256 1 252 260 295 56.0 5e-80 MPSIIIKTADELARQRHAGQLLASVFDMLDTFIVPGVTTMAINDRVEDFIVNQLHARPAS KGQYDFPYVLNTSINDVVCHGIPKATEHLRAGMIVNVDITLEKAGMIADSSKMYLIGDVS PLARRLVKTTYEAMWKGIEVVKPGATLGDIGHAIQRWVEDHGYSVVREYCGHGVGQEMHE EPQVLHYGRPGEGAVLREGMVFTIEPMVNQGDSRIKTKKDGWTVVTRDKKLSAQWEHTVA VTANGFEVLTLRDDEQSRIR >gi|289777623|gb|GG745508.1| GENE 1357 1472557 - 1473672 1106 371 aa, chain + ## HITS:1 COG:Cgl2363 KEGG:ns NR:ns ## COG: Cgl2363 COG1680 # Protein_GI_number: 19553613 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Corynebacterium glutamicum # 7 367 2 342 342 137 31.0 3e-32 MRWNRYRRDRQIIAAVLVFTVIVAAGIALQPGFHPPSSRTTGDKQLVSILTPLLNGARGQ VAAALITPQGVRYGLWGSEYTTQYEIASLSKTMTASLLLEAIRRGEVTAQTPVSALVPEI VSPVRDVTLEQLVSHRSGLPPLTASVGQRLAILSDIARRQNPWRYDRPALIAMMNQATLQ PTKWFDYSNAGFALLGLALERASHRDFATLMAQRVFTPAGMQGAEVARHNTPASPTFTMG WSASGFPQQPWVMDAFAPAGGVRATIVDMAKYAQALLAGNLAGSEGMRPLFATDDPDSRV GYAWFTTRVRGREIVWHDGQSGGFAAMMAFDRQRQTAVVILSDTAWPVIGPAIKLLLAAT PDEQEARNERN >gi|289777623|gb|GG745508.1| GENE 1358 1473659 - 1474003 392 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2651 NR:ns ## KEGG: Kvar_2651 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 171 100.0 6e-42 MNGIDILWALLTLLSVILFISGDWLAQRKIRLLNYVLLATGVIYLAEVFQTLQNLGKMGY LFRMLTWTIQASFITLSLYRVWTRPWFASRRRGVRAMSVVFAVALMSCLARLVL >gi|289777623|gb|GG745508.1| GENE 1359 1474032 - 1474565 509 177 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2652 NR:ns ## KEGG: Kvar_2652 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 177 1 177 177 281 98.0 6e-75 MKQSRTRLSLAIISGILPLFFMLALIVPLWIFFTGERYFLSTLLHFAEVPLTDNPAQAPG MARRLLLLALLYLPAGLFAFAIWQGMKVTRSVRQRSVLSLSMAHSVRYIALAMVGMGILL PVCRFLIPLLAWWPQPYYQVVFLLSDGVLLLTGSLLFVTFHAMLHGIRAEEENKEFI >gi|289777623|gb|GG745508.1| GENE 1360 1474568 - 1474774 184 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 65 1 65 67 75 52 8e-12 MAVVVNLDKLLVEKKMTSRALAAFVGITEQNLSLLKSGKVKGIRFDTLSRICEALECQPG DILAWEPD >gi|289777623|gb|GG745508.1| GENE 1361 1474934 - 1475221 239 95 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2654 NR:ns ## KEGG: Kvar_2654 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 95 1 95 95 177 100.0 1e-43 MSPLRLALICLCLAPLASSAALSGQVHFSGRVINPACLIAPQRNRIDVSCQHRSPEQVAL TDNPPRYAMPDDRGEVSLHWRNAQHSEADVIIRYR >gi|289777623|gb|GG745508.1| GENE 1362 1475667 - 1476230 717 187 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2655 NR:ns ## KEGG: Kvar_2655 # Name: not_defined # Def: fimbrial protein # Organism: K.variicola # Pathway: not_defined # 1 187 1 187 187 297 99.0 2e-79 MKEKGTLLVVGSLLAFSLATVIPARAAGTLNFTGKIINESCQIANNGGDVNVDFGNVDMS ALKSHEAKTAETPFTINLTGCPLAQNISISLEGTPDTNANGTSAAVLALSDAADTAKGVG IEVFSSPDGSTEGTQLTFDKQSKTAVSQADENGDIAFNFIADLKSDSSLDVTAGNINATA NIDIVYE >gi|289777623|gb|GG745508.1| GENE 1363 1476323 - 1477003 496 226 aa, chain + ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 13 215 18 218 227 151 40.0 9e-37 MAFFLSLLFCPLLASAAGVAIAGTRVIYNEQSHEADITVKNTNPHDPVLIQSWVDDLADN NKSPFIVTPPLFRLDAGDSNDLRVLLTSAQLPNDRESLFTLNIKVIPANTAPAGENILQF AIKNQLKLIYRPAGLPGSALDAAQHLRWHVSGNHLQAENASPYYVTITTLTCAGQNQKTP LEHSVIAPHSREEYALPGEACTRQVSWRILDDFGAVQTFSAPVSAH >gi|289777623|gb|GG745508.1| GENE 1364 1477019 - 1479526 2327 835 aa, chain + ## HITS:1 COG:ECs5276 KEGG:ns NR:ns ## COG: ECs5276 COG3188 # Protein_GI_number: 15834530 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 21 833 39 877 878 509 37.0 1e-144 MRHGPVHTVTVVSLSILLGGQSALLHAQATFNMDLLEKNDHLPAVDLQRFNQQTSQPPGD YPVSWQVNGVTLDARKIITFRQNDRGQLTPCLKPEDLLQAGVNPAVLSQASGATSRSCPE LATMLPGSTVNFDFAHQRLLMTLPQALMTRQARDNVPSALWDEGISAFQSNYRYSGASQR TREGNTERDNYLMLKSGVNAGAWRLRASNSLTANSDDKPHWTTSGAWLERDLTRWRSELT LGDTFTSGDVFDAVQFQGIALASCDAMLPDSQKGFAPTIRGIARTNAQVTVRQNGYVLYQ TYVTPGAFVIDDLYPTASSGNLEVAVKESDGEIRRFTQPYASVTSMQREGSLKYNLVAGR YHSDDASQRPLMMQLSLMRGFAHNLTLFGGLQSAAQYHNLSFGAGQGLGDAGALSLQLLN ACDQHQHQQDPIDGRAWQLQYSKGFDRLGTQFTFTGWRYSHQRYATLNEAYSSPDPDADS RDNDNKKTTLQITASQSLPYDITLYLSLDQDSYWSGGATQRTANMGISSQVHGIAWSLSY SDAHSSDGEEENDEPHSDKVVTLSLSVALSHLLPGSYAGYTLTSSRHSADSQMVSLNGTM LDNHALSYAVSQTLDQQNGHSGSLTAGYSSGRGDLNIGYSRDSQATRLNYGASGGILIHR HGVVFTPEMNGAVVLIDAGGAGGVTLANQRTIATNRDGYAVLPFATAYHRNDVALDSHSL PENVDLANSTVTRVPTKDAVVLARFHTHVGYKALFTLQSQGQPLPFGSEVRAKDTSSIVA SEGQVYLAGLAPKGTLYAQWGPGPQQHCTARYDLTPTLAQTPHPLILQQTLTCPF >gi|289777623|gb|GG745508.1| GENE 1365 1479514 - 1480518 671 334 aa, chain + ## HITS:1 COG:XF0078 KEGG:ns NR:ns ## COG: XF0078 COG3539 # Protein_GI_number: 15836683 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 91 333 88 353 354 68 27.0 2e-11 MSFLTLLRRATLTLLLALLPPASGWACTPVFVRGQATTLRLNVGQLTVPADARPGTPLYH KSFAWNRLSDGGEQWIRCADDPRGLSPLQLNSLLSGGATRPTVYQTNLAGIGVRVSLRAI GGYGGFPDRPTPSPFSQRVNNPAILPDAVWKLGYFRLTIELIKTGPAATPGELEYHSEHF LMAEHTPLAALDLSGRVNTAGCSVNDATPALIKLPAAMLDHFGGVGKTTGDTPFALQLDC NSAVTISLRVDGAEPLTARGHGVLRNDATDDRAQGIGVQLLYHRQPVSLNHEMTLGSASA GRFILPLTARYYQTRPRITAGQVSAVATYTLHYD >gi|289777623|gb|GG745508.1| GENE 1366 1480651 - 1481943 1408 430 aa, chain + ## HITS:1 COG:Z2217 KEGG:ns NR:ns ## COG: Z2217 COG1649 # Protein_GI_number: 15801647 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 16 426 27 438 439 639 75.0 0 MALAGAAVIAVGMLFSCTSKAPKSLVTTPNTTAVKASQTHREPVRGVWLTTVSRLDWPPV GSIIASTPESRITQQKLALIAKLDNLQRLGINTVFFQVKPDGTALWRSDILPWSDMLTGK IGEYPGYDPMQFMLDEAHKRGMKVHAWFNPYRVSVNTKPSTVAELNNTLTQVPASVFVLH RNWIRTASDRFVLDPGIPEARDWITSIVAEVVQNYPIDGVQFDDYFYTETASSPLNDNET FRRYGQGYASKGDWRRHNTQQLIAQVSTTIKKLNPNVEFGVSPAGVWRNRSHDPAGSDTR GAAAYDESYADTRSWVQQGLLDYIAPQIYWPFARDAARYDVLANWWAEVVKPTHTRLYIG VALYKVGEPSKNEPDWTVDGGVPELKKQLDLNETLPQIQGTILFRENNLNQPQTRQAVNY LRSRWGQPQS >gi|289777623|gb|GG745508.1| GENE 1367 1481960 - 1483282 1520 440 aa, chain - ## HITS:1 COG:hipA KEGG:ns NR:ns ## COG: hipA COG3550 # Protein_GI_number: 16129466 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Escherichia coli K12 # 1 435 1 435 440 642 70.0 0 MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHY FDNLLPDSPQVRDRIVRRYQARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTL DEAQLTALLTAYQSDIPLGMITGQDDFRISVAGAQEKTALLRMGGHWCIPQGTTPTTHII KLPIGEIKQPNATLDLRESVDNEFLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW AQEGRVLLRLPQEDLCQAFGIPSSMKYESDGGPGIAAIMAFLLGSSEALKDRADFMKFMV FQWLVGATDGHAKNFSLFLLPGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATK GRKTEINAIYPRHFLATAKAVNFPGEQMLAILQEFAGHVPQAIESARRTLPADFSTHVWR AITENMLKLHARLQQGLQAL >gi|289777623|gb|GG745508.1| GENE 1368 1483282 - 1483548 373 88 aa, chain - ## HITS:1 COG:hipB KEGG:ns NR:ns ## COG: hipB COG1396 # Protein_GI_number: 16129467 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 88 2 88 88 91 60.0 3e-19 MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKIL QSLGVVMTLNAKATETAPAPDNNTDLDW >gi|289777623|gb|GG745508.1| GENE 1369 1483814 - 1484140 427 108 aa, chain - ## HITS:1 COG:BS_yunM KEGG:ns NR:ns ## COG: BS_yunM COG2351 # Protein_GI_number: 16080299 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Bacillus subtilis # 1 108 8 121 121 72 34.0 2e-13 MSTLSTHILDISTGRPAEGVTVSLSREGETLVTLVTNAQGRIATFSAAPLPAGSYCLTAE TGAWFARAGRESVFTRAQIDFVIGEAADDHFHLPFLIAPGGWSTYRGS >gi|289777623|gb|GG745508.1| GENE 1370 1484137 - 1484637 706 166 aa, chain - ## HITS:1 COG:BMEI1577_2 KEGG:ns NR:ns ## COG: BMEI1577_2 COG3195 # Protein_GI_number: 17987860 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Brucella melitensis # 58 166 56 166 169 60 36.0 2e-09 MIALSQFNGLSKDEAVGLLAPCVAIPAWGETLVNLRPFASRHALLQTAREAMDYWGEDEL NAALSAHPRIGEKPTGGQAHAALSRQEQSAVDSENERLAQALQEGNARYEARFGRVFLIR AKGRSGEAILQALTRRLQHTADEEVTEALAQLREITMLRLEGVIGE >gi|289777623|gb|GG745508.1| GENE 1371 1484615 - 1486024 1743 469 aa, chain - ## HITS:1 COG:PA0166 KEGG:ns NR:ns ## COG: PA0166 COG2233 # Protein_GI_number: 15595364 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Pseudomonas aeruginosa # 13 455 5 448 468 448 56.0 1e-125 MHFSLLWDYTMSDEHHSGLLYGLEQRIPPLPAFFSALQHVLAGLVGIITPPLIIGATLGL GDWLPYLISMSLLASGIGTFLQSNRVWGVGAGMICMQGTSFAFLGVTVAGGMWVKAQGGG PQDMMAMLFGVNFVAALVPVIVSRFIEPLKKIFTPIITGSVIALIGISLIKVSVINWCGG EKAEDFASMSNIALGAGTLGVIVLLSCAKNRWLRLSSVVVGIAVGCVAAGLSGQFHLHSL GDTLFRLPTLFPFGFQFNSAIFLPIALVSLVCILEAVGDLTANSLISQQSIDDHAFRNRL KGGILADGVSCMVAAMLCAFPNTTFAQNNGVIQMTGVASRYVGRYIGVILILLGLFPPVG ELLRQIPAPVLGGATMVMFGCVVAAGIRIITQTPLSRRDVLIVGLAFGAGLGVESVPAFL SHFPPMVGDLFGSAATSGGLVAIALNLILPQEQAATKTIRSQDDRAESV >gi|289777623|gb|GG745508.1| GENE 1372 1486340 - 1487494 1609 384 aa, chain + ## HITS:1 COG:PA3328 KEGG:ns NR:ns ## COG: PA3328 COG0654 # Protein_GI_number: 15598524 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 23 341 28 345 388 125 29.0 1e-28 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDI METFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDFWGRESVQ FGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWN GLVEIDEALAPGDQWTTFVGEGKRVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADLSR YFAGWAPPVQQLIATLDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCA AMEDAVVLGAVFRQTHDIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQ ELREETGERIINGMCDTILSGPLG >gi|289777623|gb|GG745508.1| GENE 1373 1487475 - 1488398 1226 307 aa, chain - ## HITS:1 COG:PA0233 KEGG:ns NR:ns ## COG: PA0233 COG0583 # Protein_GI_number: 15595430 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 9 262 13 266 313 130 29.0 3e-30 MSPFSRFAHYFIAVARCGSLRRAAEQLHISASAINRQILQAEEAFGTPLFERLPEGLRMT TAGELLYDNLLRWQKEFRQTRQKFDELQGMKRGSVSVGMVQALAEGGFAAALAEIIASWP WLELDLQVADSHTVSQKVRQADLDVGLILDPQGQAGLSVLAFAELEVGIVMRPDHPLAGA KALSLGELSLERHIVPGAPLIVHERVALLYRHHDFAPENTISCNDIRLIKSLVLRGSGVT LLSLLDVLDEVQRGQLAFIPLRSTLLRPLTLALCTAPSRQLSRPAQMAIQTLSAVIESMA TVSPAAR >gi|289777623|gb|GG745508.1| GENE 1374 1488524 - 1489561 1353 345 aa, chain + ## HITS:1 COG:PA4904 KEGG:ns NR:ns ## COG: PA4904 COG4638 # Protein_GI_number: 15600097 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 26 319 7 324 351 89 24.0 1e-17 MKTITPTPPAHCTFDPEDWLRLARCWHPVARACDITGAPVKATLLDEQLVIYRIKGQVVV ARDVCPHRGVPLTLGFHEEEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVE ERYGLIWTCLACDPDNPPPLPTMPHWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAW IHTDTFADPDNQQVPDYTPQETPFGFVADYWSSVGNYPASSDFRAPEGFQWLRHFEMHLP FTATLTIHFPADARLVIMNAASPVSSRVTRMFAPIARNFDLHVPVEDVHAFNLRVFEEDR LMVETQRPERLPLDLTLEAHIPADRSSIAYRRGLKKMGFGDFFLV >gi|289777623|gb|GG745508.1| GENE 1375 1489573 - 1490547 909 324 aa, chain + ## HITS:1 COG:PA4905 KEGG:ns NR:ns ## COG: PA4905 COG1018 # Protein_GI_number: 15600098 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 8 322 4 317 317 231 48.0 1e-60 MRDIFPVVVDGLWRQGAKNLAVRLVSAEGQPLPAWTPGAHIDLHLPCGLIRQYSLTGSPA ERDHYLLCIAREAQSRGGSGYVHDTLRPGQPLMISAPRNHFPLHEGGHVVLLAAGIGITP LLAMAHARAASGASFTLHYYVSRAQEAAFATEIARQLTGGICQIHCSDEGQSPRQRLAQD LGAPHADTRVYFCGPPGFMARVRDTARAAGWEEAQLHSEAFQPPAPTAASAADGTFTITL ASTGERWPVPGNKTIAQVLQEHGVAVPLSCEMGICGACLTPVREGTVDHRDTVQSEAEKQ AAEQHIALCCSRSLSANLVIDLAG >gi|289777623|gb|GG745508.1| GENE 1376 1490524 - 1491762 1616 412 aa, chain - ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 15 393 71 449 451 311 49.0 2e-84 MSSCIAADASLSPAKPAWRAVYALALGVFGLIVAEFLPASLLTPMASSLGVSEGMAGQAV TATALVALVTGLLIATATRNIDRRWVLMFFSVLQIVSSLMVAFADSLAFLLLGRLLLGVA IGGFWAMSTATAMRLVPAAHVPKALAIIFSAVSVATVVAAPLGSYLGELIGWRNVFILCA IPSLLALLWQLWVLPSMRPESVGTFSTLFRVLRRPGMLGGMLATILIFSGHFAFFTYLRP FLETVAQASVEGVSLILLGFGIANFIGTSVASYLLSHSLRLTLALVPLMMSVLALLMVTF GHLTMLDGLLVALWGFAFGLVPVAWSTWLATTVPDEAESAGGLLVASIQLAISAGAAGGG AVFDLHGASGVFTGSGLLLLSAMVIVFAAVRVKPVASADQPETGRLSREIDN >gi|289777623|gb|GG745508.1| GENE 1377 1491868 - 1492812 1151 314 aa, chain + ## HITS:1 COG:SMb20626 KEGG:ns NR:ns ## COG: SMb20626 COG2207 # Protein_GI_number: 16265286 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 7 312 15 315 328 253 45.0 3e-67 MSQPGIDLTSELLRGMRLSGVNYRRIETARPFGVGFSAVAGKAQFHFISRGPVLLRMASG EQFTLESGDALFIPNGDGHALLSDPQATVVNVAQLPSETVCSTVSCINAGGRPDCPERAV IFSGCMDFELGGMQPLVKAMPEVMRVSSLLNTWPEIQPLLVAMERESLTRQVGYAGILAR LADVVAALIVRGWVECGCGNATGWVQVLRDPRLAKAIYAMHQRPGVNWKVEDLAREAGLS RSLFAERFLAATDTTPARYLTELRMRLAVQYITHEGQALETVAFSLGYQSLAAFSRAFKR ITGQPPGALRATAR >gi|289777623|gb|GG745508.1| GENE 1378 1492822 - 1493577 938 251 aa, chain - ## HITS:1 COG:no KEGG:KPK_2717 NR:ns ## KEGG: KPK_2717 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 251 1 251 251 487 99.0 1e-136 MATLQWDHAVQFVNQPEAAIQTFADQQLRAVAGGRHPGWGTRNALSYFGLTYIEFLAISD TDELRAATDRFLLSRDAERLLPENEALFRVALRSDDIEATHDQLRRKGLAVSPIVDGQRN DPQGNIIRWRIFTIDGDTDGLVYPFVLQWGEDDTTRLARLRAQELDVPHPLGDIALEQAV FEVVNPQAVRDRWQALLGFPPQGEQGLDVGGQWFTFREGPANQLTELVFRVANPALKGQR FRVGNGVYRFT >gi|289777623|gb|GG745508.1| GENE 1379 1493755 - 1494066 542 103 aa, chain - ## HITS:1 COG:NMA0001 KEGG:ns NR:ns ## COG: NMA0001 COG0662 # Protein_GI_number: 15793035 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 2 103 5 106 106 153 70.0 8e-38 MQSWSSKDFIADRAWGALDIANFSGTTVRLHWTDQPYIWHINDGQEVFAVMDGQVAMHVK VDGEEQVIMLNAGDIFYAEVGCEHVAHPQGAARILVIEKEGSV >gi|289777623|gb|GG745508.1| GENE 1380 1494088 - 1494351 321 87 aa, chain - ## HITS:1 COG:YPO1157 KEGG:ns NR:ns ## COG: YPO1157 COG4628 # Protein_GI_number: 16121453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 2 70 4 72 81 97 68.0 7e-21 MHSSKDPLHGVTLEALLNALVARYGWAEMARQVNINCFKSDPSIKSSLKFLRRTPWARKE VEAMYLASLDDDAPVEKADPWANWQKK >gi|289777623|gb|GG745508.1| GENE 1381 1494635 - 1495663 1377 342 aa, chain + ## HITS:1 COG:YPO1316 KEGG:ns NR:ns ## COG: YPO1316 COG3491 # Protein_GI_number: 16121598 # Func_class: R General function prediction only # Function: Isopenicillin N synthase and related dioxygenases # Organism: Yersinia pestis # 19 333 39 353 355 459 73.0 1e-129 MNATTLPILDLARYADPADKAAFLADLRHAARDIGFFYLINHGVDDALQYEVQRQSQRFF ALDEAQKQQVAMIHSPHFRGYNRAASELTRGQPDWREQFDIGAERPALTLSDDAPRWQRL QGPNLWPAALPSLKPVLLHWQQQMTQVGIRLLRAFAEALQLPENAFDRLYGEKPNEHIKL IRYPGQQETQSSQGVGAHKDSGFLSFLLQDEQKGLQVEVAPGQWIDAVPLAGSFVVNIGE LLELATNGYLRATVHRVVSPPAQQQRLSIAFFLGAQLDAVVPVYTLPPELAREARGPDSD PHNPLLRDVGWNYLKGRLRSHPDVAERYYQDVFRERAEQLIV >gi|289777623|gb|GG745508.1| GENE 1382 1495687 - 1496493 1290 268 aa, chain + ## HITS:1 COG:YPO1317 KEGG:ns NR:ns ## COG: YPO1317 COG1464 # Protein_GI_number: 16121599 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Yersinia pestis # 24 265 29 270 274 339 75.0 3e-93 MKYAAFKLAGVALSLSLAWTSAQAAALRVAADPVPHAEILNYIKKIDPSLDLKVVELTSG VNANELLASGDVDANYFQHVPYLKDQEKALGKTFAVAATVHIEPLGIYSHKHKDFSSLPE NATVAVPNNTTNLSRALFLLQAQKLIKLDPKFTDPATTLATPKDIVENPKHLKILEIESP QIPRSLDDVDLAVINGNYALEAGLVPAKDALGLESAEHNPYANILVTTPALANDPRIKAL AKDLTSPQVAEFIRKTYNGSVIPVAPQS >gi|289777623|gb|GG745508.1| GENE 1383 1496490 - 1497281 385 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 255 1 245 245 152 36 4e-35 MITIEGLSKTYAGTGRPALNDIALQIPKGAIYGILGRSGAGKSTLIRCLNLLERPTSGRI LVNGQDITQLNKAALRDYRLRTGMIFQHFNLLHARTVADNIAVPLEIAGVPRAAREARVR ELLELVDLSEKAAAFPSQLSGGQKQRVGIARALAARPEVLLCDEATSALDPETTASVLAL LADINQRLNLTIVLITHQLEVVKTICDHAALLEQGEIVESGKLADLLVTPWSRLRQSLLH DPQAEQDFLTRHGVQGRPLCGVA >gi|289777623|gb|GG745508.1| GENE 1384 1497266 - 1497937 1088 223 aa, chain + ## HITS:1 COG:YPO1319 KEGG:ns NR:ns ## COG: YPO1319 COG2011 # Protein_GI_number: 16121601 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Yersinia pestis # 1 223 1 223 223 244 71.0 7e-65 MRSSMSWEDLWPLLLDGTLDTLYMVGLAALFTVLIGLPTGVLLFISRANGLAPMPKLNAL LGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPVTIGAFPFFARLTENALDEV DYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDL AIRYGYQRFNNEVMFGTVLILVAMVQGVQMAGDRLVRSLAHRR >gi|289777623|gb|GG745508.1| GENE 1385 1497948 - 1499006 988 352 aa, chain - ## HITS:1 COG:PA4202 KEGG:ns NR:ns ## COG: PA4202 COG2070 # Protein_GI_number: 15599397 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Pseudomonas aeruginosa # 1 348 1 348 351 298 51.0 1e-80 MSNPLLSLIDIDYPLIQAPMAGVSTPALAAAVSHAGALGSLGLGASTVTQAEAMIVATRQ LTDRPFNVNLFCHAPPRRDARREADWATTLRPHFARYGSTPPDSLSEIYQTFIGHAPMLE LLLDLSPAVVSFHFGLPERETIQRLRQQGIVTLATATSLQEALLIEQQGIDVVVAQGYEA GGHRGIFAPQEPDAQLSTFTLVQLLRRRLTIPVVAAGGIMDGAGITSVMQLGAQGVQLGT AFLLCPESAADAGYRAAINNSIDGRTVLTSAISGRPARCLANAFCALGEACPASAVPDYP LAYDIGKALAAAAKAQGVHEYGAHWAGQGVGLIRECDAASLVRQLAAECGWN >gi|289777623|gb|GG745508.1| GENE 1386 1499096 - 1499941 1056 281 aa, chain + ## HITS:1 COG:PA4203 KEGG:ns NR:ns ## COG: PA4203 COG0583 # Protein_GI_number: 15599398 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 275 1 279 284 213 46.0 3e-55 MNHSTLEIFIQVAETQSVTQAAKRLGRAQSNITTRIQQLEEELAVELFVRGNKKMVLSPA GVQFLSYARRILSLAEEAKQALHPTTPGGSLRLGAMEATAASRLPPLLTRFQQRCPQVDI TLITQPTRQLTEGVLTAALDAALVCLPPGADGQPACPAELACTPVFYETLMLVRPQTPGP LRFAAFASGCSYRALGERWLAEQQAAVEVHEVNSYHSMLACVASGRYACLLPQSVLSKMT LPENCLSEPLCEATTQLIWRSGLNAPALSEWRKLLQSVAIG >gi|289777623|gb|GG745508.1| GENE 1387 1499938 - 1501038 1238 366 aa, chain - ## HITS:1 COG:XF0268 KEGG:ns NR:ns ## COG: XF0268 COG0477 # Protein_GI_number: 15836873 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Xylella fastidiosa 9a5c # 2 359 28 383 395 176 35.0 7e-44 MIGMGYGRFAFTGVLPLMLNEGLLTLHQGNLAASANYAGYLVGALLLARVQPGAASRLSI ISAGLTIASLALLAWVSSPWTIIALRAVAGALSAITLIAGSLWLLEHMGHHHGAPLLYAG VGLGIFISAEGIALGHALSLTSQQIWLLCALCAGLLLALAIRWLLTPPAALVRVSHVETS LPEAGSDTRRAAWRLLMVYGLAGFGYIITATYLPLFLSGSLQSVDPVHLWALFGLAAAPS CLIWHKLVLKWGYRQALTRNLIVQALGVILPACSASLLFCVLSALLVGFTFMGTVTIALP KAKSLSHQVSFNMIAAMTALYGVGQIAGPLIAGALYQIAASFNPALYAAALALLIAAGLV FTERRA >gi|289777623|gb|GG745508.1| GENE 1388 1501304 - 1501729 376 141 aa, chain + ## HITS:1 COG:no KEGG:KPK_2728 NR:ns ## KEGG: KPK_2728 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 141 1 141 141 283 96.0 2e-75 MLFSHMRIARPVSELDATASMYCAGLGLQQLGSFTDHEGFSGIMLGAPDAGWHLEFTHCR HHPVTPSPGDEDLLVLYYPQQAEWEAQCAAMDAAGFLRVTAFNPYWEVNGVTFVDRDGYR TVLQNRAWGEVRSASHQEENQ >gi|289777623|gb|GG745508.1| GENE 1389 1501768 - 1502214 430 148 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2682 NR:ns ## KEGG: Kvar_2682 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: K.variicola # Pathway: not_defined # 1 148 1 148 148 283 100.0 1e-75 MSHDFADIDVLFIAGFGPITRSTSQSRDFYCQALGLPLKPMPGNEAYLLSEQDAIGGVKH FALWPLAQAAQSCFGQDQWPETEPVPQAWIEFEVRDLAAATARLQQQGYRLLVAARDEPW GQTVTRLLSPEGLLAGLTVTPWLRAEEP >gi|289777623|gb|GG745508.1| GENE 1390 1502444 - 1503631 1581 395 aa, chain + ## HITS:1 COG:yhhS KEGG:ns NR:ns ## COG: yhhS COG0477 # Protein_GI_number: 16131345 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 9 388 28 407 419 350 52.0 4e-96 MSTSVSTTQLNLRIISIVVFTCICYLSIGLPLAVLPGYIHYQLGYSTFVAGIVISLQYIS TLISRPHAGRYTDIWGPKKVVSLGIICCLLSGAFTLLAVLLQATPMLAIAALLAGRVFLG VGESFTATGATLWGIKTVGAIHTSRVISWNGVATYVAMAIGAPLGVTLNHYFGISGFATV VVVVAAIGLLFARTRQDVSVTAGVRAPFHAVVRKIWPYGLGLAFGTVGFGVIATFITLYF AAHSWQGAAFTLSLFSVGFICVRLVLGNTITRYGGVPVSLVCFVIECLGLLLIWLAPSAW VAGVGAFLTGSGFSLVFPALGVEAVKQVEEQNQGTALGTYSAFLDLALGLTGPLAGWVAG FYDLATLYLLAAIVVVFAFLLILRVQRQQRAVSGT >gi|289777623|gb|GG745508.1| GENE 1391 1503848 - 1504138 318 96 aa, chain + ## HITS:1 COG:no KEGG:KP1_2691 NR:ns ## KEGG: KP1_2691 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 96 39 134 134 204 98.0 1e-51 MHQSFNQRVHFYYCVLVALKMHGKSKKSGGIRGKNNFLLKWLRRAQDNNIFPPDITSEIE WLRGKIIQAGYDTDLEPMLDFVYATASRAEALKNAE >gi|289777623|gb|GG745508.1| GENE 1392 1504341 - 1505102 772 253 aa, chain + ## HITS:1 COG:tam KEGG:ns NR:ns ## COG: tam COG4106 # Protein_GI_number: 16129478 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli K12 # 1 252 1 252 252 326 63.0 3e-89 MADWNPSLYLQFDAERTRPAADLLSRIAHLQVEHVVDLGCGPGNSTRLLRAAWPLAAITG IDNSPAMLAQAAQALPDCEFIDADIARWRPAQPVDVIYANASLQWLADHETLFPHLVAQL AVNGTLAAQMPDNWQEPSHTLMRQVADEQGLPDRGRQPLLPPDAWYDMLTRQGCEVDIWR TTYFHPLASHQAISDWLQGTGLRPYLAGLDEQSRNAFLTRYVELLAEHYPLQCNGKVLLR FPRLFIVARKIDV >gi|289777623|gb|GG745508.1| GENE 1393 1505259 - 1505579 351 106 aa, chain + ## HITS:1 COG:RSp1472 KEGG:ns NR:ns ## COG: RSp1472 COG0599 # Protein_GI_number: 17549691 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Ralstonia solanacearum # 4 95 5 96 108 103 53.0 6e-23 MENSAVNRNTLAAIAPKLAELTETVLFGDIWARRDLSPRERSLITLSALTALGKTQQLPW HIALGYQNGLSQAEIVELFTHLAFYAGWPAAASALTCLNEQETPCP >gi|289777623|gb|GG745508.1| GENE 1394 1505570 - 1505950 237 126 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2687 NR:ns ## KEGG: Kvar_2687 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 126 1 126 126 235 96.0 5e-61 MPLTRISLGTAWRPTEFAQLSALFHECLVAEFDVPSADKFQFIEQAADEQRIYDPNYLSD GRSARFVLFHIFAGKPRSRAQKQRLYRRLCARLADEMAVSPQDVMVVIQFNQQEDWSFSA GRMAIE >gi|289777623|gb|GG745508.1| GENE 1395 1505999 - 1506097 76 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKRLDTVVNLIMFLSLLATAWDLSLVHHLAW >gi|289777623|gb|GG745508.1| GENE 1396 1506162 - 1506608 549 148 aa, chain - ## HITS:1 COG:AGc449 KEGG:ns NR:ns ## COG: AGc449 COG0454 # Protein_GI_number: 15887612 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 146 1 147 147 142 49.0 2e-34 MVIDIREIRPHDKAEWLNLWEGYTRFYGSPQPEEVTECTWQRMLDENSPVLGRVAVVDDT VVGFAICILHEGTWVTTPICYLEDLFVDPAFRGQGIARTIIKSLQTEGADKGWSRLYWHT RRDNPARHLYDEFTPADDYVRYRITLGS >gi|289777623|gb|GG745508.1| GENE 1397 1506863 - 1508314 1624 483 aa, chain - ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 860 84.0 0 MKTLNRRDFPGAQYPDRIIQFGEGNFLRAFVDWQIDLLNEHTDLNAGIVVVRPIATDFPP SLSTQDGLYTTIIRGLNEQGEAVSDARLIRSVNREISAYADFDAFLRLAHNPEMRFVFSN TTEAGISYHAGDRFDDAPPVSYPAKLTRLLFERYQHFAGAADKGWVIIPCELIDYNGEAL QALVLRYAAEWQLPQAFIRWLTSANTFCSTLVDRIVTGYPRDEVAALEAQTGYKDAFLDT AEHFYLFVIQGPASLAAELRLDKLPLNVRIVDDIKPYKERKVAILNGAHTALVPVAFLAG IDTVGEAMNDAEICAFVEKAIYDEIIPVLDLPRDELESFASAVTGRFRNPYIKHQLLSIA LNGMTKYRTRILPQLLAGQQKSGQLPPRLTFALAALIAFYRGEREGERYPVQDDAEWLTR YQTLWARHRDRQMSTRELVTAVLSVEAHWEQDLSQIPGLVEQVTADLDAILSRGMRDAVQ PLC >gi|289777623|gb|GG745508.1| GENE 1398 1508428 - 1508958 416 176 aa, chain - ## HITS:1 COG:PA1885 KEGG:ns NR:ns ## COG: PA1885 COG0454 # Protein_GI_number: 15597082 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 3 175 2 173 177 186 54.0 2e-47 MTTSFSLRTLSRDDILHHLPALSDILASCVNGGASVSFMLPFSAHTATTFWQHTADSVAA GERIVLAALDADERPVGTVQLITRQPENQPHRADVAKLLVHQNARRQGIANALMSELEHV ARQEGKTVLVLDTAAGSGAEQFYVRCGWEKVGEIPRYALMPDGEMTATSLFYKFLP >gi|289777623|gb|GG745508.1| GENE 1399 1509036 - 1510460 1619 474 aa, chain - ## HITS:1 COG:Z2182_2 KEGG:ns NR:ns ## COG: Z2182_2 COG2199 # Protein_GI_number: 15801615 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 290 463 1 174 185 184 52.0 2e-46 MSSLSIRSFTLFREEQPVRDALVLFTLTLLLHFLGAMLRLVQELSFFWPLNAVMAGIFAR YVWLNRSYFYAVCFAAMLVYDGLTSRWGMGFASLLINFSNIVFIVVLAQLVLWDKRRADS MPGPINALNLFCFCLFAALLCAAVGALGSVDVERATFIPQLADWFSEQFSTAVLILPFIL TLTLPSALSGFRFRQLLPALALVLSIALGVAVGGAGSITFPLPALIWCAVRYPLPLTCLL TFLTGISEILLVANSLIHFSPDARMQPWQLFSTRLGIAAMLISPVIVASSVEAINTLVKQ LALRADFDFQTRVYSRSGLSEALKRQALPADKLLTVMVLDIDGFKRVNDALGHEGGDCVL TQFAQQVRQLVDEQGMVARIGGEEFAVAAVVDSTQQGYLLAEKIRHGVESQPFGLGQNPI HLTISMGLETREVGHARITELFNQLLMAADEEMVKAKQTGRNRICMPALTESAP >gi|289777623|gb|GG745508.1| GENE 1400 1510575 - 1510943 382 122 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2697 NR:ns ## KEGG: Kvar_2697 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 122 1 122 122 241 100.0 5e-63 MVEQDRLFARLARSTFRSRFRLGVKERQYCLDKGPEIIDQHAADFIRQRLAPAEPMNDGK QTPMRGHPVFIAQHATATCCRGCLEKWHAIPHGRALSEQEQRYVVQVIHHWLVLQMNGPS VR >gi|289777623|gb|GG745508.1| GENE 1401 1510943 - 1511890 1014 315 aa, chain - ## HITS:1 COG:ECs2131 KEGG:ns NR:ns ## COG: ECs2131 COG2066 # Protein_GI_number: 15831385 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli O157:H7 # 8 315 1 308 308 517 81.0 1e-146 MVGKELHVAAVINNAMLEAILAEIRPLIGRGKVADYIPALASVSGDKLGIAISTVDGQHF AAGDAHERFSIQSISKVLSLVVAMNHYQEEEIWQRVGKDPSGQPFNSLLQLEIEQGKPRN PFINAGALVVCDMLQSRLSAPRQRMLEIVRRLSGVADIAYDPVVARSEFEHSARNAAIAW LMKSFGNFHNDVATVLQNYFHYCSLEMSCVELARTFLFLADRGIAPHLEAPVIAPIQSRQ VNALMMTSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPQEMAIAVWSPELDDAGNSLAGV ALLEKLTQRMGRSVF >gi|289777623|gb|GG745508.1| GENE 1402 1511950 - 1513335 1980 461 aa, chain - ## HITS:1 COG:yneI KEGG:ns NR:ns ## COG: yneI COG1012 # Protein_GI_number: 16129484 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 5 460 14 469 470 688 76.0 0 MNLSATHAVSVNPTTGEVVSSLPWASEREVDAAIALAAAGYRQWRQTPLAERADALRRIG AALRARGEEVAQMITLEMGKPIAQARGEVAKSANLCDWYAEHGPAMLATEATQVENNQAV IEYRPLGAILAVMPWNFPVWQVLRGAVPILLAGNSYLLKHAPNVMGSARLLGEIFAAAGL PDGVFGWVNATNDGVSQIINDDRIAAVTVTGSVRAGKAIGAQAGAALKKCVLELGGSDPF IVLNDADLDEAVKAAVTGRYQNSGQVCAASKRFILEAGIADAFTRKFVDAVAALKMGDPR DEQNYVGPMARFDLRDELHQQVTATLDEGATLLLGAEKIEGAGNYYAPTVLGNVTAGMTG FRQELFGPVATLTTARDADHALALANDSEFGLSATVYTTDEAQAQRFARELECGGVFLNG YCASDARVAFGGVKKSGFGRELSHFGLHEFCNAQTVWKDRR >gi|289777623|gb|GG745508.1| GENE 1403 1513442 - 1514320 946 292 aa, chain + ## HITS:1 COG:STM1523 KEGG:ns NR:ns ## COG: STM1523 COG0583 # Protein_GI_number: 16764868 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 283 1 283 290 490 84.0 1e-138 MDLTQLEMFNAVATTGSITQAAQKVHRVPSNLTTRIRQLEADLGVELFIRENQRLRLSPA GHSFLRYSQQILALVDEARMVVAGDEPQGLFSLGSLESTAAVRIPTTLAHFNQRYPKIHL ALSTGPSGTMIDGVLEGALSAAFVDGPLVHPGLEGLPVFPEEMMIVAPYGHAPIDRASEV NGANVYAFRANCSYRRHFESWFHADRATPGRIHEMESYHGMLACVIAGAGLALIPRSMLE SMPGHQQVSAWPLAEEWRWLTTWLVWRRGAKTRQLEAFIALLNEDRQTAVSP >gi|289777623|gb|GG745508.1| GENE 1404 1514274 - 1514756 717 160 aa, chain - ## HITS:1 COG:AGc3193 KEGG:ns NR:ns ## COG: AGc3193 COG0454 # Protein_GI_number: 15889043 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 151 10 151 151 118 43.0 5e-27 MYTVTDIAPTDAEFTALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALVIRSAQGEAV GCGAIVLSEEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAA ITLYTRNGYQTRCAFAPYQPDPLSVFMEKPLFADLRSAAL >gi|289777623|gb|GG745508.1| GENE 1405 1514902 - 1515846 1096 314 aa, chain + ## HITS:1 COG:lin1569 KEGG:ns NR:ns ## COG: lin1569 COG0039 # Protein_GI_number: 16800637 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Listeria innocua # 4 310 2 308 311 434 68.0 1e-122 MHTKARKVMIIGAGNVGASAAYALLNQSICEELILVDLNQQRAEAHAQDLSDAAAYLPGM MTISTREASDCADVDIAVITVSGGALRPGQSRLDELTTTAKIVKSIVPAMMANGFNGIFL VATNPCDIITWQVWQLSGLPRSQVLGTGVWLDTTRLRRLLAQELDIGAQSIDAFILGEHG DTQFPVWSHSSVYGSPIADLYQQRTGHPLDREAMAEKVRKLGFEIYAGKGCTEYGVAGTI AEICSNIFTGSHRALAVSCILDGEYGVSGAAAGVPAVLAQGGVEQIIELQLAAEEQAKFS QSIAVIKANIARLP >gi|289777623|gb|GG745508.1| GENE 1406 1515861 - 1516622 894 253 aa, chain - ## HITS:1 COG:STM0164 KEGG:ns NR:ns ## COG: STM0164 COG1349 # Protein_GI_number: 16763554 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 242 1 242 255 337 67.0 1e-92 MKGYNRLEQIMDFLKSHNLVTVDQLVAATNASPATIRRDLIKLDQEGVISRTHGGVTLNR FIPSQPTTLEKAQRSPLEKQAIASAAAALVKAGDAIVLDAGTTMIELARQITHLPLRVIT SDLHIALFLSEFKQIEVTIIGGRIDDSSQSCIGDHGRRLLQTIWPDLAFVSCNGWDLEKG ITAPTEEKAALKRDLMANARRRILLADSSKYGAWSLFNITPLESLTDIVTDAHLPEATRE ALVTLSPQLIIAD >gi|289777623|gb|GG745508.1| GENE 1407 1516624 - 1517610 438 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 4 325 8 326 346 173 31 3e-41 MSNMIAVTMGDPAGIGPEIIIKSLAEGALSGAPVVVVGCAQTLRRILALNITPRAELRII DHPAEARFSPATINVIDEPLSDPQGLRPGEVQAQAGDLAFRCIRRATALALDGAVAAIAT APLNKEALHLAGHAFPGHTELLAHLTQTTDYAMVLYTEKLKVIHITTHIALRQFLDTLNQ PRIETVIGVADRFLRRVGYQRPRIAVAGVNPHAGENGLFGDEEIRIVAPAVAAMQAQGIE VTGPCPPDTVFMQCHEGMYDMVVAMYHDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGT AFDIAWTGKAKSESMATSIELAMHIAQE >gi|289777623|gb|GG745508.1| GENE 1408 1517603 - 1518838 1040 411 aa, chain - ## HITS:1 COG:STM0162 KEGG:ns NR:ns ## COG: STM0162 COG3395 # Protein_GI_number: 16763552 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 7 407 2 418 423 243 40.0 6e-64 MNDGNNQVLVLADDFTGANDAGVSLAEAGMSVEVAFSAGQPSTARALILNSDSRAMSAAA AADKVTGLLRGAARFVPHWQVKKIDSTLRGNLGGELEAMMAAHGCRLAVVAPAYPAAGRH TRDGRCYVHGVALDQTEFASDPKTPVSRAEISEIIAMQSRLPCLTLNAAQLPEALATAGE EKRVLIVDAWEDSHLDQVIDAVAPHARETLLVGSAGLCEALARRLRRCEQGPLLALVGSM SEMAQRQVAALQAHSRVRKIEIDVEQAFSRSPKEEASRIAEVLREGHHCVVTTRPNNAAR HGIEAQCNERGLSRAAYGEHICAWLADVTAQAVALCPPGALYLSGGDVAIAVAHALGATG FQIRGRVAQCVPYGHFLGGRWSRPVMTKAGGFGTDTTLLNVVNFIEEKLSV >gi|289777623|gb|GG745508.1| GENE 1409 1519014 - 1520162 1285 382 aa, chain + ## HITS:1 COG:AGpA199 KEGG:ns NR:ns ## COG: AGpA199 COG1454 # Protein_GI_number: 16119364 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 378 32 399 399 175 34.0 1e-43 MATIHSTIISGAGASTALLPLLSGKTRILLVTDQNVGALEATRAIHRLLAAEGRQVEVID TVPAEPSHHDVAQIVSQLGASQPQMIVGIGGGSVLDVAKLLSVLLHPEAPSLTALLAGEL PQRRISSLLIPATAGTGSEATPNAILAIPEQQTKVGIISPVLLPDYVALLPELTTSMPAS IAASTGIDALCHLLECFTSTVANPVSDNAALIGLHKLVRHIERSVDQPQDLTAKLEMLWA SWYGGAAINHAGTHLVHALSYPLGGTWHLPHGVANAILLAPCMRVVRLYAVAKFAQVWDL IPDADRTLSEEEKSHALVAWLAALVKRLPLPDNLAALGVPRESIPALSAAAQNVKRLMNN APCSVSREEIAAIYQTLFPEHA >gi|289777623|gb|GG745508.1| GENE 1410 1520176 - 1521060 777 294 aa, chain + ## HITS:1 COG:SMb20140 KEGG:ns NR:ns ## COG: SMb20140 COG0329 # Protein_GI_number: 16263888 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Sinorhizobium meliloti # 9 292 6 290 293 239 43.0 3e-63 MRRAISGVLTAIVTPFTAEGALNLPALRQQVQRQLAAGNGIFCGGTNGEFFVLNEEEKIA VARTCVEEAAGRAPVVAHIGEISTRETRRLGQQIARLGVDAVSAITPWFVPLKQEELINH YTAIADALSVPLFLYNIPARTGNTIAPETARQLARHENIVGIKDSAGSYDSLKGFLDAVR DIDGFDVLNGPDSLIHQGYVDGCSACISGLANVAPAEINAIWSLFHAGDIAGSRQAQERV TGLRTDLYKVAFSPAAVKKALQLMGHEVGDSRYAVQFSDQQLQQIRDIIARYLA >gi|289777623|gb|GG745508.1| GENE 1411 1521137 - 1522546 1544 469 aa, chain + ## HITS:1 COG:FN0877 KEGG:ns NR:ns ## COG: FN0877 COG0591 # Protein_GI_number: 19704212 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Fusobacterium nucleatum # 33 456 22 450 456 89 21.0 2e-17 MNHFTAEDTFIIVGIVIAYILFTTWLTFRIRSKNSGDFMEGSRAMPAFIVGILLMSEYIG AKSTIGTAQAAFESGIAASWSVLGAAIGFPLFGLILVKRIYNTGKITISGAIAEKYGNST KNIISLIMIYALLLVNVGNYVSGAAAISTVLKVNLPVAAFITAIVSTFYFAFGGMKGVAW VTMLHSALKYAGLLIILGFALSKTGGFSPMMEKMPDYYWTWDGNIGAGTIFAWLIGTIGS IFCTQFVIQAISSTKDVRSAKRSTWIAFFFCLPIAFAIAIIGVAAKYLHPEINSLYALPV FLQDMNPWLAGLVTTSLVASIFVSVSTVALAIASLVVKDFYVPWRNPTPDQEFRATRWAS LIIGFLPLIFVLLVPEVLKLSFFTRAIRLSITVVAVIAFYAPFFRSTRGANAGLIGACVV TSVWYLLGDPFGINNMYVALATPAIIMVIDRLIPNKSQPSPAPVEQRGV >gi|289777623|gb|GG745508.1| GENE 1412 1522550 - 1523716 811 388 aa, chain + ## HITS:1 COG:AGpA102 KEGG:ns NR:ns ## COG: AGpA102 COG4692 # Protein_GI_number: 16119301 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted neuraminidase (sialidase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 23 385 25 393 397 349 50.0 7e-96 MTVIPPFDGVIRQHQQDEHIAWAMLPCACPQNHAANLLPLDDGSLMCVWFGGSQEGKADI SIWGSRLAPGSDRWSEAVKLSDDPDRSEQNPVLFQAPDNVLWLLWTAQFAGNQDTAIVRY RLSHDGGRSWGAIDTLLDQPGTFIRQPISVMSDGNWLLPVFYCRTEPGEKWVGNNDVSAV KISSDCGKSWRDVAVPESLGCVHMIITPLPDGRLAAFFRSRWADHIWFSQSSDQGESWSA PVPTTLPNNNSSIQATTLDNGELALVFNNMSAAGATERRASLYDEIADDDGRREPEATGK SAFWGAPRAPMTVAISADGGESWPWLRNLDEGDGYCMTNNSEQKLNREFSYPSIKQGADG NLHIAYTWYRQAIKYVRVSPQWVKGESA >gi|289777623|gb|GG745508.1| GENE 1413 1523713 - 1524186 405 157 aa, chain + ## HITS:1 COG:STM4468 KEGG:ns NR:ns ## COG: STM4468 COG2731 # Protein_GI_number: 16767713 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 149 1 147 150 96 38.0 2e-20 MIIGNLQALQQAGLPPALKQLLSSEACSLAALSARENGRFQPDGAPWFCTLSVVQTQPAA ERHTEYHRQWADIQVILAGEERIQAGMAPAMRPEDNELKPDLYICQPAPESVSILLRPGD FAVFYPGEPHQALCAVSTPAPVRKAVFKIPAEMLEAR >gi|289777623|gb|GG745508.1| GENE 1414 1524183 - 1524860 213 225 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 2 220 4 238 242 86 31 3e-15 MKRAMVTGASSGIGAAVVRQLLADGWQVIGMSRSLPPFSQPNFRHLMVDVSQRSALLAAL EQIEPPQAIIHAAGSMAAATLGNLDPQRSESLWRLHVDAAQTLVNHFAPTMGPGGRIVLL GSRTSRGAAGRSQYAATKAALVALARSWAAELAPAGVTVNVVAPGATDTPMLHQPGRESS PPRLPPLGRLITPQEVVSLVSWLLSEGASAMTGQELVMCGGASLG >gi|289777623|gb|GG745508.1| GENE 1415 1524924 - 1525715 1023 263 aa, chain - ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 3 262 2 259 259 237 49.0 2e-62 MQEIQFYLVDAFSDKNFGGNAAAVCPLSEWLADDVLLKMAQQHNQSETAFFVHTDEGYEL RWFTTLGEINLCGHATLATAHVIFEYLDHPSATITFSTRFVGELRVTRSGDWLTLDFPAW STTPVDNPPADLLAGLGLESAVEVREGRDYLVVLADRQQVEAVQTDMARLQKLGKMICVS APDEEYDFVSRFFCPGEGVPEDPVTGSAHSMLIPWWGEKLGKTTMMARQVSARGGDLRCQ WQGDRVLISGQATTYLRGTVYLR >gi|289777623|gb|GG745508.1| GENE 1416 1525917 - 1527116 1487 399 aa, chain + ## HITS:1 COG:STM1522 KEGG:ns NR:ns ## COG: STM1522 COG2814 # Protein_GI_number: 16764867 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 397 1 396 396 528 82.0 1e-150 MTTNTVSRKVAWLRVVTLAIAAFIFNTTEFAPVGLLSDIAGSFGMETAQVGMMLTIYAWV VALMSLPFMLLTSKMERRRLLIGLFILFIASHVLSFFAWSFDVLVISRIGIAFAHAVFWS ITSALAIRMAPPGKRAQALSLIATGTALAMVFGIPIGRIIGQYFGWRMTFLAIGLGALAT LACLVKLLPTLPSEHSGSLKSLPVLFRRPALVSVYILTVVVVTAHYTAYSYIEPFVQTVA GLSGNFATVLLLILGGAGIIGSILFGKLGNQHASGLISIAIGLLLACLLLLLPASDNAHH LMLLSIFWGVAIMIIGLGMQVKVLASAPDATDVAMSLFSGIFNIGIGAGALVGSQVSLHL SMASIGYIGAIPALAALVWSLMIFRRWPVSLEDHQPHHS >gi|289777623|gb|GG745508.1| GENE 1417 1527187 - 1527855 867 222 aa, chain - ## HITS:1 COG:STM1521 KEGG:ns NR:ns ## COG: STM1521 COG2095 # Protein_GI_number: 16764866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 340 87.0 1e-93 MFDLFKAIGLGLAVLLPLANPLTTVALFLGLAGNMNNAERNKQALMASVYVFAILMVSWY AGQVVMNTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAHDSMEAKIKSEELQDEPTANIA FVPLAMPSTAGPGTIAMIISSASTVKHGVDFPEWVVLAAPPIIFLLLGVILWACLRSSGA IMRLVGKGGIEAISRLMGFLLVCMGVQFIINGVLEIISTWHP >gi|289777623|gb|GG745508.1| GENE 1418 1528117 - 1528551 442 144 aa, chain + ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 144 1 144 144 238 84.0 2e-63 MKSTSDLFNEMIPLGRLIQMVNQKKDRLLNDYLSPMDITATQFRVLCSIRCEVCITPVEL KTVLSVDPGAMTRMLDRLACKGWIERLPNPADKRGVLVQLTPDGAALCEQCHQVVGQKLH QELTKNLSADEVVALEQLLKKVLP >gi|289777623|gb|GG745508.1| GENE 1419 1528571 - 1528945 420 124 aa, chain + ## HITS:1 COG:STM1519 KEGG:ns NR:ns ## COG: STM1519 COG2207 # Protein_GI_number: 16764864 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 124 18 141 144 218 92.0 2e-57 MSRRNNDAITIHSILSWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS RKLTEIAQKLKQSNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRITNVPGESRYLH PLNN >gi|289777623|gb|GG745508.1| GENE 1420 1528986 - 1529204 250 72 aa, chain + ## HITS:1 COG:no KEGG:KPN_01623 NR:ns ## KEGG: KPN_01623 # Name: marB # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 72 1 72 72 116 97.0 4e-25 MKLFAAAAIVLLSLVSSLSYAEQNTTPVRQNQRDTMIIPSEHNDSPFDFNHMAAGSDKSD ELGVPYYQQHDL >gi|289777623|gb|GG745508.1| GENE 1421 1529251 - 1530150 1519 299 aa, chain - ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 377 78.0 1e-104 MTRKDGLLALLVVVVWGLNFVVIKLGLHNMPPLMLAGLRFMLVAFPALLFVSRPAIPLRL LLGYGLTISFGQFAFLFCAIGLGMPAGLASLVLQAQAFFTIILGAFVFGERLQGKQLAGI ALAIFGVLVLVEGSLGGEHVPLVGFMLTLAAALSWACGNIFNKKIMSHAARPPIMSLVVW SALIPVLPFMLASWLIDGPQTMLASLQHIDLLTILSLLYLAFIATIVGYGIWGSLLGRYE TWRVAPLSLLVPVVGMASAALLLGETLSGLQLTGAVLIMAGLYINVFGLRLVRPGMARG >gi|289777623|gb|GG745508.1| GENE 1422 1530327 - 1531541 1638 404 aa, chain + ## HITS:1 COG:ECs2141 KEGG:ns NR:ns ## COG: ECs2141 COG0477 # Protein_GI_number: 15831395 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 7 394 1 388 395 504 72.0 1e-142 MTGKEIMITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRYQLDVDVIGYALSLALV VGVLFSMGFGILADKFDKKRYMVWSVLVFILGFSAIPLVNNAILVVIFFALINCAYSVFS TVLKAWFADRLTPEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSINLPFWLAAACAAFP LVFIQLFLQRDGAAAAQPGAAAWSPSVLLRDRALLWFTCSGLLASFVSGAFASCLSQYVL VVASSDFAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFS GASLWAWGISAAIFTLGEVIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAFNPMFTG MILTHLPHWSLFVILIVAIVAAWLMIFRGMNARPWQPDCPLANA >gi|289777623|gb|GG745508.1| GENE 1423 1531671 - 1532153 714 160 aa, chain + ## HITS:1 COG:no KEGG:KP1_2654 NR:ns ## KEGG: KP1_2654 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 160 31 190 190 258 98.0 5e-68 MNSNNQVKQLRLQRAWSQEQLAEMAGLSVRTIQRIENGERPGLETLSALAAVFEVTVAEI GGEASREDAPGPEASLDLRIEEAKARVHQESRFFRSLSVALVVCVLLAVLNRFTNPQYYW SGWVALIWGALLVVRGLRLFVFGEWIKNWRQARLQRLLRK >gi|289777623|gb|GG745508.1| GENE 1424 1532189 - 1532887 284 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 221 1 226 245 114 29 2e-23 MLQVSQLHQYYGGSHILRGVDFSARQGEVTCLLGRNGVGKTTLLKCLMGLIPARSGEVRW QDQNITHRKPHQRVQAGVAYVPQGREIFPRLTVEENLLMGLSRFPAREAQQVPEEIYQLF PVLKTMKQRRGGDLSGGQQQQLAIGRALASRPQLLILDEPTEGIQPSVIKEIGEVIRQLA SRGDMAILLVEQFYDFAAGLADHYLVMSRGAIVQQGKGGDMESDGVRAMVTI >gi|289777623|gb|GG745508.1| GENE 1425 1532897 - 1533694 228 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 257 1 231 245 92 27 6e-17 MQPDEGLFTRQLPGDRFREQTDPVLQLENINVSFDGFRALTDLSLAIGVGELRCVIGPNG AGKTTLMDVITGKTRPQSGKALYDQSVDLTTLDPVAIARQGIGRKFQKPTVFEALTVAEN LALAMKGDKSVWASLRARLSSEQDDRLNEVLRLLRLDGERYRQAGLLSHGQKQFLEIGML LVQEPHLLLLDEPAAGMTDAETEYTAELFRTLAGQHSLMVVEHDMGFVETIADRVTVLHQ GQVLAEGSLREVQANEQVIEVYLGR >gi|289777623|gb|GG745508.1| GENE 1426 1533694 - 1534767 1546 357 aa, chain - ## HITS:1 COG:YPO1189 KEGG:ns NR:ns ## COG: YPO1189 COG4177 # Protein_GI_number: 16121484 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Yersinia pestis # 1 355 1 355 358 467 81.0 1e-131 MSQPITLTLAQRAPRPLRWLGILLVLGLLSMPFLALLPASHPLAVPSWLLTLSGKILCYA IVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFW WGTQHFAWAMALVVLVPGLLALVFGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGF GGNNGFTGFTTLLGFPVTATGTRATLFMATVLLLLLTLWLGSALAQSKFGRILTAVRDAE NRLMFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAIWVALGG RGTLIGPVLGAGLVNGAKSIFTVAMPEYWQLFLGLIFIIVTLFLPRGVMGLLRRGDR >gi|289777623|gb|GG745508.1| GENE 1427 1534767 - 1536341 1988 524 aa, chain - ## HITS:1 COG:YPO1188 KEGG:ns NR:ns ## COG: YPO1188 COG0559 # Protein_GI_number: 16121483 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Yersinia pestis # 13 524 22 533 533 563 69.0 1e-160 MNALRLMSVLALLLILLPWRAQAAEADDFVAASRSQQAQLLTQWAAAPQADRLPLLRALT TESLVMDDGKHAFRTRQGGLQPLGAVAAPQGETRPVRLTNRLRNLAAGALASHLILSDNV TERASAARTLQREATPAMAALLQQRLQAETDENVRGLLEVALARLQLTQPEASARLAAVT LLGHSADPETQALLIPFTDAQHEPDAAVREAASDSLQKIKHRLLLGDLLGQAFMGLSLGS VLLLAALGLAITYGLLGVINMAHGEMLMIGAYSCWLVQQALAQLAPQWLAFYPLVALPVA FLVTAGIGMALERTIIRHLYGRPLETLLATWGISLMLIQLVRMLFGAQNVEVANPAWLSG GVQVLPNLILPWNRLAVLAFVLLVLCFTWLILNRTRLGMNVRAVTQNRAMAACCGVPTGR VDMLAFGLGSGIAGLGGVALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGL GIFNKILEPQMGAVLGKILILVMIILFIQKRPQGLFALKGRVID >gi|289777623|gb|GG745508.1| GENE 1428 1536403 - 1537674 2001 423 aa, chain - ## HITS:1 COG:YPO1187 KEGG:ns NR:ns ## COG: YPO1187 COG0683 # Protein_GI_number: 16121482 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Yersinia pestis # 1 420 1 420 422 754 87.0 0 MQRRTLLKAFALSASVMAMGLSFQAYAADTIKVGIMHSLSGTMAISETPLKDVALMAIDD INAKGGVLGKKLEPVVVDPASNWPLFAEKARQLLAQDKVAVVFGCWTSVSRKSVLPVFEE LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLLSDDGGGAKRFFLLGTDYVYPR TTNKILRAFLHAKGIQDKDIEEVYTPFGYSDYQTIVANIKKFSAGGKTAVVSTINGDSNV PFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFESVDNPTNKAFVAD YRAYAKAHKLPNADTVVTNDPMEATWVGLHMWAQAVTKAGTTDVDKVREAMAGQTFNAPS GFTLTMDATNHHLHKPVMIGEIEGNGQFNVVWQTDKPVRAQPWSPWIPGNDKKPDHPVKT VSQ >gi|289777623|gb|GG745508.1| GENE 1429 1537845 - 1538948 1337 367 aa, chain - ## HITS:1 COG:lin0838 KEGG:ns NR:ns ## COG: lin0838 COG0620 # Protein_GI_number: 16799912 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Listeria innocua # 4 367 3 365 367 459 58.0 1e-129 MQRQQAPFRADIVGSFLRPDSIKQARQQLAEGIIDAGQLREIENNAIRHLVQQQCDCGLH VVTDGEFRRAWWHFDFFDGLQGVERYDAEQGIQFNGVQTKAHGVRVTGKLAFGDHPMLED FRYLKSISGDAQPKMTIPSPSVLHFRGGRKDIDANVYPDLSDYFDDLATTWRDAIRAFYD AGCRYLQLDDTVWAYLCSDAQRQQVRERGDDPDALARIYARVLNQALEGKPADLTVGLHV CRGNFRSTWISEGGYEPVAEVLFGGVNVDAFFLEYDNDRSGDFAPLRFIRPGHQQVVLGL ITTKNGELENPQGVKARLAEAAQYVPLEQICLSPQCGFASTEEGNALSEDQQWQKVRLVT SIAADVW >gi|289777623|gb|GG745508.1| GENE 1430 1539097 - 1539495 504 132 aa, chain - ## HITS:1 COG:Z2165 KEGG:ns NR:ns ## COG: Z2165 COG0607 # Protein_GI_number: 15801600 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 EDL933 # 1 130 1 130 131 178 69.0 3e-45 MSVVTQFPPAASAEAIRWFRHKLHLETDCADVHSAQRAGEVDFVLLHVVGSEEAFARRHL PGAEHLPHSQITAERMAAWPAETLFVVYCAGPHCNGADVAALKLAELGRPVKMMLGGLTG WEDEGYAFVSGK >gi|289777623|gb|GG745508.1| GENE 1431 1539599 - 1540660 755 353 aa, chain + ## HITS:1 COG:Z2164 KEGG:ns NR:ns ## COG: Z2164 COG4977 # Protein_GI_number: 15801599 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Escherichia coli O157:H7 EDL933 # 2 315 7 320 327 429 66.0 1e-120 MTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYHFAVAAVDEGPLCATGGIRL MTDGGPELLAQADTIVVPGWRGVDAPVPEALCAALVAAHARGCRIISICSGVFVLAAAGL LNGRQATTHWRYTAALQSRFPQIQVVEDVLYLGDALLMTSAGSAAGIDLCLHLVREDFGS EAANVVARRLVVSPHRDGGQTQQVLRPVARSRESQRLGQLFDYLHQHLAASHTVASLAQR AGMGPRTFLRRFEEATGKTPARWLLDERLLRARQHLTESTMSIDQIAERCGFASAGTLRH HFRQHFALSPLQYRKQFATSPIAKSSRQRTIDGHSKRVARRVDDEERVSGSDL >gi|289777623|gb|GG745508.1| GENE 1432 1540629 - 1540844 429 71 aa, chain + ## HITS:1 COG:no KEGG:KPK_2772 NR:ns ## KEGG: KPK_2772 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 71 1 71 71 129 100.0 3e-29 MKKECRVVIYKEGLLGSLFFGEAKADPDKMSQFLSSYTREGWEVKTMSVERRRTALFWSR EAYLFVLERPL >gi|289777623|gb|GG745508.1| GENE 1433 1540897 - 1541337 632 146 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2730 NR:ns ## KEGG: Kvar_2730 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: K.variicola # Pathway: not_defined # 1 146 1 146 146 283 100.0 1e-75 MMVIEGKEAIARVDWQRVRTIIAEAGLNERDVQQLEQAFRQSTFCWFGYENGQLIAVARA ISDCTWSSYLADVAIVPERQGQGYGQQLMLAIREQLLPFGKIFIYAVADKITFYQRFGFA MLTTGMVCASEEGMHNMQEQGYIRRP >gi|289777623|gb|GG745508.1| GENE 1434 1541603 - 1542667 1386 354 aa, chain - ## HITS:1 COG:YPO0849 KEGG:ns NR:ns ## COG: YPO0849 COG1609 # Protein_GI_number: 16121157 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 354 1 355 357 294 46.0 2e-79 MPRRTATLEDVARAAGVSQQTVSRVLNRPEVVSARTREQVIRAMQTLHYVPNRSAQLLAG KAAPSIGLITASLSLHAPSQIAAAIKSHASLHQLEVAIAMPAQADFVALQARLDELRAQH IRGVIVSLPLESATAERLVQENPDMACLFLDVSPEADVCCVRFDHRDGCGACVRHLWELG HREFGLLAGPESSVSARLRLASWREALHSLNIARSTTVFGDWSAASGWQKTFELLHLQPR ISAIVVANDQMALGVLSALAQLNRSGSRAVSVTGYDDTADSLYFQPPLTTVAQDFDLLGK RAVERLIALMAAPQLRIRELLPTRLIVRQSAWPAAVAEDQQQTLAQLKALVEKL >gi|289777623|gb|GG745508.1| GENE 1435 1542864 - 1545971 3634 1035 aa, chain + ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 17 1030 11 1019 1024 1189 60.0 0 MQISDTGHSHMPDFHAVLAREDWQNQTITHLNRLPAHPAFASWRDELAARDNHPSTRRRQ LDGEWQFAYARSPFAVDAQWLTQDLPDSRGTPVPSNWQMEGYDAPIYTNVRYPIDTTPPR VPEDNPTGCYSLHFTVEDTWRENGQTQIIFDGVNSAFHLWCNGVWVGYSQDSRLPAAFDL SPFLRPGDNRLCVMVMRWSAGSWLEDQDMWRMSGIFRSVWLLNKPQQRLCDVQLTPALDA LYRDGNLQVQATIEATEAALAGLSVGVSLWRGEEQVAAGRQPLGTPAVDERGHYAERVDF SLAVAAPAHWSAETPNCYRAVVTLWRGDELLEAEAWDIGFRRIEIADGLLRLNGKPLLIR GVNRHEHHHLRGQVVTEADMVQDILLMKQNNFNAVRCSHYPNAPRWYELCNRYGLYVVDE ANIETHGMVPMNRLSDDPAWLPAFSARVTRMVQSNRNHPCIIIWSLGNESGGGGNQEALY HWLKRNDPSRPVQYEGGGADTTATDIICPMYARVERDQPIPAVPKWGIKKWISLPGEQRP LILCEYAHAMGNSLGNFADYWQAFREYPRLQGGFIWDWADQAIRKIFDDGSVGWAYGGDF GDKPNDRQFCMNGLVFPDRTPHPSLVEAKHAQQYFQFTLLSTSPLRVRITSEYLFRPTDN EVVRWQVQSAGETLYHGNLTLALPPEGSDEITLLDSLILPEGARAVWLTLEVTQPRATAW SEAEHRVAWQQFPLPAPLALPAPTVPAGAPDLIVSDEVWQIRAGSQCWTIDRRTGLLSRW SVGGQEQLLTPLRDQFIRAPLDNDIGVSEVERIDPNAWVERWKSAGLYDLEAHCVQCDAQ RLANETLVDCRWHYLRGEEVVIVSHWRMHFTADGTLRLAVDGERAETLPPLPRVGLHFQV ADQQAPVSWLGLGPHENYPDRRSSACFARWEQPLAAMTTPYIFPTENGLRCDTQALDWGR WHVSGHFHFSVQPWSTRQLMETDHWHKMQAEDGVWITLDGLHMGVGGDDSWTPSVLPQWL LSQTRWQYEVSLRCL >gi|289777623|gb|GG745508.1| GENE 1436 1546026 - 1547291 1735 421 aa, chain + ## HITS:1 COG:ECs0396 KEGG:ns NR:ns ## COG: ECs0396 COG0477 # Protein_GI_number: 15829650 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 27 407 22 402 417 442 61.0 1e-124 MKFSELAPRERHNFVYFLLFFFFYYFIMSAYFPFFPVWLADVNHLTKTETGIVFSSISLF AIIFQPVFGLMSDKLGLRKHLLWTITVLLILFAPFFIFVFSPLLQMNIIAGALAGGIYLG IVFSSGSGAVEAYIERVSRANRFEYGKVRVAGCVGWALCASITGVLFGIDPNITFWIASG FALVLGLLLWLSRPESSNSAEVIEALGANRQAFSLRTAAELLRMPRFWGFIVYVIGVASV YDVFDQQFANFFKSFFASPQRGTEVFGFVTTGGELLNALIMFCAPAIVNRIGAKNALLTA GMIMSVRILGSSFASSAVEVVILKMLHMFEIPFLLVGTFKYISSAFNPRLSATLFLIGFN LSKQLSGVVLSAWVGRMYDTVGFHQAYLILGCITLSFTLLSFFTLRGGKNLLPAAGTQTP A >gi|289777623|gb|GG745508.1| GENE 1437 1547320 - 1548408 1154 362 aa, chain - ## HITS:1 COG:PA0787 KEGG:ns NR:ns ## COG: PA0787 COG4637 # Protein_GI_number: 15595984 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pseudomonas aeruginosa # 1 360 1 371 387 242 38.0 1e-63 MIQYIRIQNFRSVRDIALELGPLNIVFGPNGCGKSNIYNAIHLLTAAADGRLSGFISEEG GLENMMWSGERSPVDRHPRRLQIACRTDSFDYELQIGFPEKLPYPTQFMLDPIVKEENIW LAGYSRRPSSRVLQRKNQAAFLVDVTGEKSTFTESIYENESVFGQLGEPHRFPEVSRVRE TLRRWRFYHEFAIGRHSPLRQPAVGYRSPVLDSDGHNLAAAFQTIVEIGAEEILHEILAD AFPGCQFYCENEQSRFALKMRREGIRRPLLAAEMSDGTLRFLCLAVALLSPRPPAFLAIN EPENSLHRDMLPALARLIIEASRYSQIWLTSHSAELAELIAAGAPCQRYALENRGGETRI VE >gi|289777623|gb|GG745508.1| GENE 1438 1548495 - 1548734 254 79 aa, chain - ## HITS:1 COG:no KEGG:KPK_2779 NR:ns ## KEGG: KPK_2779 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 79 8 86 86 155 100.0 5e-37 MLVGGKADGLLVSVADDATEVSVTPAQYGAPSGQPLSYRIVSQTIDDERYYFGVFSEAHQ DSDKLTRVALTRGMKKMFC >gi|289777623|gb|GG745508.1| GENE 1439 1549050 - 1549910 1045 286 aa, chain + ## HITS:1 COG:BS_penP KEGG:ns NR:ns ## COG: BS_penP COG2367 # Protein_GI_number: 16078940 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Bacillus subtilis # 31 257 55 278 306 191 42.0 1e-48 MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTIGELCA AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTGAGERGARG IVALLGPDGKPERIVVIYLRDTPASMAERNQHIAGIGAALIEHWQR >gi|289777623|gb|GG745508.1| GENE 1440 1549928 - 1550689 686 253 aa, chain - ## HITS:1 COG:YPO1938 KEGG:ns NR:ns ## COG: YPO1938 COG1349 # Protein_GI_number: 16122184 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 1 252 1 252 256 305 65.0 5e-83 MIPIERHQRILALVEQRGAVSINELTEILGVSHMTIRRDVSKLEEQGLLVSVSGGVRAVS RLATEPSHLVKSTLQSEEKQAIGALAASHIAKNSCIYLDAGTTTLALARAILDRDDLQVV TNDFEITQLLIDASQCGVIHTGGTLCRENRSCVGESAARTLRHLAIDTAFISASGWDSRG IFTPDENKVTVKETVSQVSARSILLCDSSKYNQVATFMALPLTRFTTIITDRHLSDAAAS HIARHACEVLRAG >gi|289777623|gb|GG745508.1| GENE 1441 1550950 - 1551852 1021 300 aa, chain + ## HITS:1 COG:ygbJ KEGG:ns NR:ns ## COG: ygbJ COG2084 # Protein_GI_number: 16130643 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 6 299 8 301 302 370 76.0 1e-102 MAAHTNVCVIGLGSMGMGAARACLQAGLNTWGVDINPDNCRALLAAGAKGAGPSAVPFAA DLDAVVLLVVNAAQVRGILFGETGLAAHLKPGTVVMVSSTIASADAQAIAVALAEYQLLM LDAPVSGGAVKAAAGDMTVMASGSDAAFARLAPVLDAVAGKVYRIGSDIGLGSTVKIIHQ LLAGVHIAVAAEAMALAARAGIPLETMYDVVTHAAGNSWMFENRMQHVLDGDYSPKSAVD IFVKDLGLVNDTARALTFPLPLATTALNMFTSASNAGFGREDDSAVIKIFNGITLPGHKQ >gi|289777623|gb|GG745508.1| GENE 1442 1551864 - 1553129 1774 421 aa, chain + ## HITS:1 COG:STM2917 KEGG:ns NR:ns ## COG: STM2917 COG3395 # Protein_GI_number: 16766223 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 419 2 419 420 472 61.0 1e-133 MQLGVIADDFTGATDIASFLVRNGMPTVQLNGVPTRDLPLTSEAVVISLKTRSCAVEMAV SQSLAALRWLQAQGCQQFYFKYCSTFDSTAQGNIGPVLDALLAELGETRTVISPALPVNG RTVYQGYLFVGEQLLNESGMRHHPVTPMEDAHLGRLIERQGRGKAALIAWPIVARGPEAV ATALATISDPAVRYVVLDALSEQDLLTQGVALREMKLVSGGSGLAIGLARDWAQRHGARG ESAQAGMPLAGPAVVLSGSCSVMTNSQVAAYREQAPARAVDLSACFTDLESYVTTLTDWV DAQRDAPLAPMIYATTEPQTLQRIQAQYGDKASSERVEQLFSALAAALKAKGFTRFIVAG GETSSIVAQTLGVEAFHIGPTISPGVPWVRDTRQPLSLALKSGNFGDIHFFARAQQEFRH D >gi|289777623|gb|GG745508.1| GENE 1443 1553122 - 1553742 1046 206 aa, chain + ## HITS:1 COG:ygbL KEGG:ns NR:ns ## COG: ygbL COG0235 # Protein_GI_number: 16130645 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 3 206 8 211 212 311 75.0 6e-85 MTEQQLRDEMVQIGASLFSRGYATGSAGNLSLLLPDGNLLATPTGSCLGELQAQRLSVVT LQGEWLSGDKPSKEVTFHRAVYLHNPACKAIVHLHSHYLTALSCLQGLDPHNCIRPFTPY VVMRVGDVPVVPYYRPGDDRIAQALAGLAPRYNAFLLANHGPVVTGSSLREATNNTEELE ETARLIFTLGNREIRYLTTDEVDELR >gi|289777623|gb|GG745508.1| GENE 1444 1553747 - 1554529 823 260 aa, chain + ## HITS:1 COG:STM2915 KEGG:ns NR:ns ## COG: STM2915 COG3622 # Protein_GI_number: 16766221 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Salmonella typhimurium LT2 # 1 258 1 258 258 361 68.0 1e-100 MPKFAANLTMLFTELPFLDRFAAAARAGFEAVEFLFPYEYEAGEIKQRLQENQLQLVLFN TPPGDVNAGEWGLAAVPGRSAEARQQIQLALEYACQLDCPQVHIMAGVVQPGMDRAACEA VLIDNLRYAAECFARHDKRILIEALNPQTKPGYLYHSQYQTLEMVKRVDRPNVAVQLDLF HAQKVDGNLSHLITEYAGQYRHIQIASLPDRHEPDEGEINYPWLYALLDKTGYDGWIGCE YIPRADTLSGLGWFSPYRKK >gi|289777623|gb|GG745508.1| GENE 1445 1554587 - 1555951 1604 454 aa, chain + ## HITS:1 COG:ygbN KEGG:ns NR:ns ## COG: ygbN COG2610 # Protein_GI_number: 16130647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 454 1 454 454 432 61.0 1e-121 MSTSALLLIALASVVLLLLLVIKAKAHPFVALLIVSLLVAFATGIPADKIITTIEKGMGG LLGHIASIIILGSMLGVLIEMSGGAESLAKTLTGVLGAKRTIAALTIVAFILGTPVFFEV GFIIIIPLIYGFSKVAHVSPLKFGLPMAGVMLTVHVALPTHPGAAAAAGILHSDVGWLML AGIGVSIVVGIVGYFVARFINRRHYHLSINVLEQQQTAEVPDLSVNAQQTRLPPPNALVI GGLIVVPIMLIVSGTLCQALLLPENAVRQLMTVIGTPPVALLISLGLASWTLGIRRRMSL KKLGEVTGSAIPSSADVILVAGAGGAFGGVLVASGIGNALAEALETIHLPLMPAAFLLSL VLRASQGSATVAILTTSGLLSQAVIGLDPIQLVLVTLATCFGSLGLSHVNDAGFWVVTRY LGLSVPDGLKTWTVLTTIMGVTGFLITWLLWFVL >gi|289777623|gb|GG745508.1| GENE 1446 1556014 - 1556913 560 299 aa, chain - ## HITS:1 COG:ECs0337 KEGG:ns NR:ns ## COG: ECs0337 COG2207 # Protein_GI_number: 15829591 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 263 13 271 296 136 32.0 6e-32 MKQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTI AAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYRCAVHWDTALLLKKFDPE GESLPQARFCSLPERVYRGSPMKYELRLSDMVLQSTSKTAVRQKVDRFFTAGGGRLSVLS DYYAASNNELNVEVNAFVGCHRERGALPALTTNSTLTTRPGLYVGVEFYGSWARYARLSS DLYMELLPALGASRREGVDIECFLERHTEGGPAAERRYRVRYFIPVTLSGEVTARPAPG >gi|289777623|gb|GG745508.1| GENE 1447 1557223 - 1557834 105 203 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2744 NR:ns ## KEGG: Kvar_2744 # Name: not_defined # Def: LuxR family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 203 1 203 203 387 100.0 1e-106 MTNFLFNIKNHYLRVAIAELVNETMQACERSHYQFSQQWKPASIAQADVIFTEMVAGEWY LCHELLQHATENYQLFIFLNDEEVTVIDHLPNCFKHAVFIHPHTAVHLLKEVIGHAIQRP LTEQHGSPFNRLRRCINCPCKSLSDAQTKVIYAFSIGLSPHEVATVLKISHKTIHSHKKN IMNKFHLKSRQQFNNLVQILARR >gi|289777623|gb|GG745508.1| GENE 1448 1558385 - 1559602 995 405 aa, chain + ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 170 397 13 240 243 230 48.0 5e-60 MLTTLIYRSQVDPARPLTDLDALIHRASGKNMPLGITGILLFNGQQFFQVLEGNEEILES LFSKIQFDPRHRDVVELMRDYSAYRRFRDVGMRMLDLRYHENNAAVEEILRFSTFGETEP VNDRMFRLISAFIADGGRYCLPESLQPSRWSMTPTVGNASPRNLTDQPCQFALQAIVEPA KRRVSSFEALIRSPTGGSPVEMFAAIAAEDRYRFDLESKAFAFSLAARLPLGKQQLAVNL LPGSLYNHPDAVGWLMDNLLAAGLRPEQVLIEVTETEVISCFDQFRKVLKALRVAGMKLA IDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEG VETIEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWPVARQATDL >gi|289777623|gb|GG745508.1| GENE 1449 1559623 - 1560135 217 170 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 29 164 765 904 904 88 39 1e-15 MTDEMSYDAKPTSALTAEVAQMLVARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVV TFSDEAKRNVLQVRAETLEVHSAVSEACVQEMSAGILAMADADIAIAISGYAGPEGGEDG TPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALAALSEKLAHWQ >gi|289777623|gb|GG745508.1| GENE 1450 1560303 - 1560776 384 157 aa, chain - ## HITS:1 COG:STM1251 KEGG:ns NR:ns ## COG: STM1251 COG0071 # Protein_GI_number: 16764603 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Salmonella typhimurium LT2 # 1 156 1 154 155 234 74.0 4e-62 MALKTLSALPVFADSLFADRFNRIDRLFSQLTGDTPVGALPAYDLQKIDDSNFLLSVSVP GWKDEELEIETVGGNLHITGKRGETDSGTDGSQRWIYKGIRRADFQLSFSLPEHAQINQA QLDSGILKVTIHQEIPESEKPRKIAIESHGRVIEHKV >gi|289777623|gb|GG745508.1| GENE 1451 1561273 - 1561377 112 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTGIFISTTLFALFASMLIGLGMVWKGISNNPDN >gi|289777623|gb|GG745508.1| GENE 1452 1561543 - 1561722 65 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINIFETRINACNISNLSSLCQIADNFYATHIRNSLILKILYHPHSNKSNFGLIAFVCY >gi|289777623|gb|GG745508.1| GENE 1453 1561806 - 1562435 144 209 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2749 NR:ns ## KEGG: Kvar_2749 # Name: not_defined # Def: LuxR family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 209 1 209 209 410 99.0 1e-113 MPDFLINTENIYLKRGICELLIEIAIEENICTPFSLHEYSSDIISQTDVLFTEMETGEHY LCHPYFKKIPQQTPVFVFVPSDSCARVDRLPLCLRDACFISINADLSSIKKEIANRLTAL SKPVAGGAEKDSRRCLKCPRLTLTKSQLYIIDAIKTGMNNQQIAQELGISHKTVFSHKIN IMKKFQIDTKQELARFSAIALALSSIATH >gi|289777623|gb|GG745508.1| GENE 1454 1562904 - 1563449 203 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226867588|ref|ZP_03817223.1| acetyltransferase, ribosomal protein N-acetylase [Actinosynnema mirum DSM 43827] # 5 154 14 161 176 82 32 5e-14 MHIDTHRLHLRPVMASDVDDLYRIYGDPATNTFNPAGPYPNIDYAEVVLRRWLVHWQTHG FGNWAISMRNTPEHIIGFGGVSLRSYNDVTINNLGYRFSTEAWGKGLATEFAIGAMRCGF EVLKLAEMSAVVRANHLASQKVLEKAGMRYINDIADVKDAPPSLLYSLTLNEWLSQISGC T >gi|289777623|gb|GG745508.1| GENE 1455 1563669 - 1564562 205 297 aa, chain + ## HITS:1 COG:PA4145 KEGG:ns NR:ns ## COG: PA4145 COG0583 # Protein_GI_number: 15599340 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 291 1 292 296 377 63.0 1e-104 MIDDIRYLIVFAKIVERGSISGGAAALGLTTATASTHLSRLEKNLNSALLYRNTRKISLT QDGISLLETARSMLELYEKGVIEFKQRSISTVGKLRISLPAVFLNGPFTRHLANFIKENP DISLSISYSDLREDIIADSIDVAFRIGELPDSSLKARHLFVLPRQLVASKDLLMQHQPIK HPVELGSLPWIGLTMRENIREFRHKNGELAVIKYAPMVCVDNIEAAYVLAKQNIGLAVPP RFLCENDVKLGEMHEVLPDWSLEPLKVYAIWPANISTSSAAYKLINYIYNAMEQHKL >gi|289777623|gb|GG745508.1| GENE 1456 1564573 - 1565094 2 173 aa, chain - ## HITS:1 COG:VC1712 KEGG:ns NR:ns ## COG: VC1712 COG1280 # Protein_GI_number: 15641716 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 1 170 35 204 204 81 28.0 8e-16 MVIISSGVMHGFRKTFAFVSGATLGFTLLLIFVSFGLYTVIASHPSFFKYLNVLGSIFIL YQGYKIATSQPDWSLKKGNAPGFVQGVLMQWFNPKAWAACTSGTTLFSEPSTSLPLILFI IIYFFICYISLSIWAIFGDKMSTFLQGRAQMRIFNLLMGGFLCVIACYMLYPQ >gi|289777623|gb|GG745508.1| GENE 1457 1565305 - 1565994 246 229 aa, chain - ## HITS:1 COG:CC0717 KEGG:ns NR:ns ## COG: CC0717 COG1814 # Protein_GI_number: 16124970 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Caulobacter vibrioides # 1 228 6 233 233 186 53.0 2e-47 MHLERHSIESVGWLRAAVLGANDGIVSTASLVLGVASANTSPSGVLLAGVAGLVAGAMSM ATGEYVSVSSQADTETAALAEEKSELDADYQGEVRELTSLYIQRGVEPALARQVAEQLMA KDALEAHAREELGLTDTHSARPLQAAIFSAVSFSAGAGLPLIVAVLSPAKLTVIAIFLST LCSLAALGYFSSVVSNAPPVRAISRITFWSTLAMLFSIGIGRIAGQVLL >gi|289777623|gb|GG745508.1| GENE 1458 1566048 - 1566629 417 193 aa, chain - ## HITS:1 COG:no KEGG:KPK_2819 NR:ns ## KEGG: KPK_2819 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 193 2 194 194 350 100.0 2e-95 MNEQLRNALPHKDTPFFRMLHIIVATLILLQIISSNLTESEALRDVTLTGVVTWFHVISG FALMVLGVVMLVWMLKQRGFRYYFAWSSLDFRGVVEDIKMLMTFRLPEAHAGGIAAMIQG LGVLALLAVALCGGLWFVLDTAPGTSTALAEAVLHLHKFLTVFIETYFWAHGAMGLLHIF LTFRSQKKHPVVG >gi|289777623|gb|GG745508.1| GENE 1459 1566776 - 1566997 114 73 aa, chain + ## HITS:1 COG:no KEGG:KPK_2821 NR:ns ## KEGG: KPK_2821 # Name: not_defined # Def: 3-beta hydroxysteroid dehydrogenase/isomerase family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 37 73 261 297 297 84 100.0 2e-15 MDLLVKLMRLSPPPYFLVERQKKTLPQWVNIIVVRLALAHVDLGASGKATQTHLGWLPDG PGLLEDLRNMNKG >gi|289777623|gb|GG745508.1| GENE 1460 1567676 - 1568569 194 297 aa, chain - ## HITS:1 COG:RSp1146 KEGG:ns NR:ns ## COG: RSp1146 COG0583 # Protein_GI_number: 17549367 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 287 7 292 298 241 42.0 1e-63 MAVFVRVVDRGSFSAVAEEMRISGTMVGLHIKALEEHLGVRLLNRTTRRQSLTDFGQGYY QSCRRILADIEDSESQAFALHQKPRGKLRVGCPVSFGVHALSPVTAQFLIEWTDMAVDLV LSDKSMDMADEGLDVMIKIGELLHVNTLVARPIAPYRSVMCASPAYIKRAGEPITPEELC HHRCLGFAHPIAANEWTLQREGKPVRAPVNITMTCNNGEALRRAALNGLGIIMQPEILLA EDLQHGRLLPLMSEFQPLAKPVHILTFANRQQLPKIRLYVDFLLKNFSASLYALNLE >gi|289777623|gb|GG745508.1| GENE 1461 1568689 - 1569093 95 134 aa, chain + ## HITS:1 COG:L35675 KEGG:ns NR:ns ## COG: L35675 COG0599 # Protein_GI_number: 15673958 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 8 122 4 117 122 72 37.0 3e-13 MITNTELRERGMRLFNELYGNGAGEELRKDMADLCPDFTDISIEWAMGGILARPGLDAKT RELVVIASCVTLGHTVPQLRAHAQAALNAGATREEIIEVVLQLLFYAGGAAVRNALVNIR DIINAELNVEAKMS >gi|289777623|gb|GG745508.1| GENE 1462 1569389 - 1570018 -87 209 aa, chain + ## HITS:1 COG:RSc0499 KEGG:ns NR:ns ## COG: RSc0499 COG0406 # Protein_GI_number: 17545218 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Ralstonia solanacearum # 2 201 16 214 227 83 29.0 3e-16 MQVILVRHAETEWNIKGIIQGQSDSALTPRGERQTSALLAAFAASDYRVDCVYTSPLGRA WQMGQRLADRFRCPLIAEPALKEQAFGQFEGMLTSQLLQQRPHDAHALFTHDAEYCPPQG ESLAQATRRVTGFIHNLPEATEHQRICIVTHGQVSQGVLAVLKEGTIDNFSRYAHPNASY SMFDFRDGKCLAIRWGIATHLLQLERQNA >gi|289777623|gb|GG745508.1| GENE 1463 1570086 - 1571006 422 306 aa, chain + ## HITS:1 COG:PA5029 KEGG:ns NR:ns ## COG: PA5029 COG0583 # Protein_GI_number: 15600222 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 283 3 282 301 164 36.0 2e-40 MKPTLNQLINFCTVAETGNIGKAASKLNISQPPLSRQIAQLETILGAKLFNRAAKGVSLT LAGEQFLLDCRAMLAMLEQACNNVRAIESGQKGVLKLGATMYASYSVVPHVAMQHRNTCS DVELHFQERVPSDLHAALQDGRLDAAISFSETATPGIHSLVLLREPLIAALPANHPQVQH EHFRLESLCDDPFITVPRESAPMLYDSILHQCLKAGFSPQIGLEASVQQTVMNFVAHGVG VALIPASMENAQLRGVVYRKLENPNMVENMLMWSAKNTNPALPGFVNLCRSIKDKLDAAQ SGRIND >gi|289777623|gb|GG745508.1| GENE 1464 1571003 - 1572697 715 564 aa, chain - ## HITS:1 COG:Ta0780 KEGG:ns NR:ns ## COG: Ta0780 COG0028 # Protein_GI_number: 16081847 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Thermoplasma acidophilum # 32 531 4 462 497 235 32.0 2e-61 MSNAITKVQNANARRGGDVLLEVLESEGVEYVFGNPGTTELPFMDALLRKPSIQYVLALQ EASAVAMADGYAQAAKKPGFLNLHTAGGLGHGMGNLLNAKCSQTPLVVTAGQQDSRHTTT DPLLLGDLVGMGKTFAKWSQEVTHVDQLPVLVRRAFHDSDAAPKGSVFLSLPMDVMEAMS AIGIGAPSTIDRNAVAGSLPLLASKLAAFTPGNVALIAGDEIYQSEAANEVVALAEMLAA DVYGSTWPNRIPYPTAHPLWRGNLSTKATEINRALSQYDAIFALGGKSLITILYTEGQAV PEQCKVFQLSADAGDLGRTYSSELSVVGDIKSSLKVLLPELEKATANHRRDYQRRFEKAI NEFKLSKESLLGQVQEQQSATVITPLVAAFEAARAIGPDVAIVDEAIATSGSLRKSLNSH RADQYAFLRGGGLGWGMPAAVGYSLGLGKAPVVCFVGDGAAMYSPQALWTAAHEKLPVTF IVMNNTEYNVLKNFMRSQADYTSAQTDRFIAMDLVNPSVDYQALGASMGLETRKVIRAGD IAPAVEAALASGKPNVIEIIISKS >gi|289777623|gb|GG745508.1| GENE 1465 1573213 - 1575258 2027 681 aa, chain - ## HITS:1 COG:STM1512 KEGG:ns NR:ns ## COG: STM1512 COG0339 # Protein_GI_number: 16764857 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Salmonella typhimurium LT2 # 5 680 4 679 680 906 69.0 0 MSEQNPFFSVSLLPYQAPPFDLIQDYHYRPAFDEGVRQQRAEIRAIIDNPEPANFANTLE ALEQSGQLLARVTRVFFAMAGAHTNPFIQSLDEEFSAELAELGNDIWLNEALFQRVNSVY EQRDALALDSESHRLLTLTWQRFVHAGATLAPAQKAVLRTLNTEAATLQSQFQQRLLGAA KSGGLVVDYRHQLDGLADEEIAAAADAAREKGLSDRWLLTLTNTTQQPPLLSLRDRQTRE NFFAAGWTRNQQGDEHDTRRLVLRLAAIRAQQAELLGAADYASWALTDQMAASPAEALTF MRRIAPAARARAERELADIQQVIDNEGGTFRAAAWDWLYYSEQVRRAAFAIDDAQLKPYF ALERVLQDGVFWTATQLFGLRFVERFDIPVYHPDVRVWEIFDHNGEGMALFYGDYYARDS KSGGAWMDVFVEQSTLREQRPVIYNVCNYARPQAGQSALLSWDEVITLFHEFGHTLHGLF ASQRYASLSGTNTPRDFVEFPSQIFEHWASQPQVFAHYAKHYQSGEPMPEALRDNMLRAA TFNKGYDMSELLAAALLDMRWHSLSTSAIPEDVDGFEQKILQEEHLDLAAVPPRYRSSYF SHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGQRFREAILSRGNSTDLAELY RQWRGHDPQIEPMLKNRGLNA >gi|289777623|gb|GG745508.1| GENE 1466 1575389 - 1576138 1051 249 aa, chain + ## HITS:1 COG:ydfG KEGG:ns NR:ns ## COG: ydfG COG4221 # Protein_GI_number: 16129498 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Escherichia coli K12 # 1 248 1 248 248 446 87.0 1e-125 MIIMVTGATAGFGESITRRFVANGHKVIATGRREERLKTLKDDLGDNLYIAQLDVRNRAA IETLIADLPAEWQAIDVLVNNAGLALGLEPAHRASVEDWEDMIDTNNKGLVYMTRAVLPG MVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV GGTEFSNVRFKGDDAKAGKTYENTEALTPEDVTEAVWWVATLPKHVNINTLEMMPVSQSF AGLSVHRQG >gi|289777623|gb|GG745508.1| GENE 1467 1576230 - 1576916 798 228 aa, chain + ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 343 79.0 1e-94 MAAESQLNPTQPVNQQIYRILRRDIVHCLIPPGTPLSEKEVSVRFDVSRQPVREAFIKLA ENGLIQIRPQRGSYVNKISLSQVRNGCFVRQAIECAVVRRAAGMINDEQVYQLEQNLHQQ RIAVDRQQSNDFFLLDDEFHQKLSIIADCQLAWDTVENIKAAIDRVRYMSLDHITSPEML LRQHHEIFTALEKRDAEAVEQAMNVHLHEISESVLLIRQENRDWFSED >gi|289777623|gb|GG745508.1| GENE 1468 1576968 - 1577399 563 143 aa, chain - ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 143 1 142 142 147 55.0 7e-36 MYKKILLPVDVFEMDLSDKAVRHAEFLATAENGEITLLNVLPNSSRSLLRGFTADIRKFE AYMKEESEKKMREVARLFDIPMSRIHTRVVFGNVRDEILAISNNEEFDVIVVGSRKPGIS THLLGSNAESILRYAKTPVLVVR >gi|289777623|gb|GG745508.1| GENE 1469 1577664 - 1579127 1813 487 aa, chain - ## HITS:1 COG:ECs2151 KEGG:ns NR:ns ## COG: ECs2151 COG0246 # Protein_GI_number: 15831405 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 790 79.0 0 MENTLLTANAMLPGYDRSALIPRIVHLGFGAFHRAHQAVYADILASEHGSDWGYTEVNLI GGEQQIADLRQQDRLYTVAEMSADAWTARVVGVVKQALHAQVDGLEAVLAAMCEPQVAIV SLTITEKGYCHSPASGELQLDHPLIVADLHNPHQPKSAPGVVVEALARRRAAGLPAFTVM SCDNMPENGHVMRNVVCAYARALDAELAAWIEQNVTFPSTMVDRIVPAVTAETLDKIEQL TGVRDPAGVACEPFRQWVIEDNFVAGRPQWEKAGAELVADVVPFEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMQDDNYRRAALALMLDEQAPTLKVQGVDLPRYASLLIDRYCNPALK HRTWQIAMDGSQKLPQRMLDSVRWHLAHQQDFTLLALGVAGWMRYVGGVDDAGQAIEICD PLLPVIQQAVAASAEGEARVKALLGIEAIFGLALPQEPRFVSAVTRAYLALQRLGAKATV AAWAAEQ >gi|289777623|gb|GG745508.1| GENE 1470 1579414 - 1580697 1572 427 aa, chain - ## HITS:1 COG:ECs5316 KEGG:ns NR:ns ## COG: ECs5316 COG0477 # Protein_GI_number: 15834570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 16 427 35 448 453 452 56.0 1e-127 MAIETLAARAGATPLRIRRVQKITLTLLFIAGIVNFLDRSSLSVAGEAIRADLGLSATEF GVLLSAFSLSYGFAQLPSGILLDRVGPRIVLGAGLIFWSAMQALTGMVNSFSHFILLRIG LGIGEAPFMPAGVKSINDWYAQRERGTAVGIFNSSTVLGQAIAPPALVIMQLAWGWRTMF VVIGLAGILVGLCWYVGYRNRRHFTLQEEEQQYLASEEVARPALKFSEWLALFKRRTTWG MILGFSGVNYTGWLYIAWLPGYLQAQQGLSLARTGWVAAIPFLAAAVGMWVNGLVVDALA RRGYDLAKTRKTAIVIGLVLSALGTLLVVQSSTPTQAVAFISMALFCVHFAGTSAWGLVQ VLVAEHKVASVAAIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAAGVTFTGALCYFF IVKTRID >gi|289777623|gb|GG745508.1| GENE 1471 1580812 - 1581138 485 108 aa, chain - ## HITS:1 COG:ynfA KEGG:ns NR:ns ## COG: ynfA COG1742 # Protein_GI_number: 16129540 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 107 1 107 108 147 85.0 5e-36 MLKTTLLFFATALCEIIGCYLPWLWLKRGATPLLLIPTGLALALFVWLLTLHPAASGRVY AAYGGVYVCTALLWLRVVDGVKLSHYDWAGAIIALCGMLIIVAGWGRA >gi|289777623|gb|GG745508.1| GENE 1472 1581283 - 1581624 503 113 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2773 NR:ns ## KEGG: Kvar_2773 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 113 1 113 113 189 100.0 3e-47 MNMTLNKRWCLTAILALSAVVYTSSSFAATDRLVIESGDSAQSRQQASMEKEQWNDTRSL RQKVNKRAEKEWDKTDVAFDAQDNCQKSANVNAYWEPNTLRCLDRRTGRAINP >gi|289777623|gb|GG745508.1| GENE 1473 1581703 - 1582263 461 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116512426|ref|YP_809642.1| spermidine acetyltransferase [Lactococcus lactis subsp. cremoris SK11] # 1 175 4 178 212 182 48 6e-44 MTDALHVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF VIECNGDKAGLVELVEINHVHRRAEFQIIISPDFQGKGLATRAARLAMDYGFTVLNLYKL YLIVDKENEKAIHIYRKLGFIVEGELIHEFFINGEYRNTIRMCLFQHQYLAEHKTPGPAL LKPTAQ >gi|289777623|gb|GG745508.1| GENE 1474 1582257 - 1582967 917 236 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2775 NR:ns ## KEGG: Kvar_2775 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 236 1 236 236 469 100.0 1e-131 MKRLYWLIPAALLLTACDRQSAPEAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVV VKKVSAQLSKEGCFDLLTLEDVENNTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPA TGVSWETDDNGFIIRARGKETTATYRYDSDGYPLGKTTTAKEEQFTVASTPSKDPRKKMD YTAISTFNERTLGTVRQTCDYDRHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY >gi|289777623|gb|GG745508.1| GENE 1475 1583069 - 1583338 377 89 aa, chain + ## HITS:1 COG:no KEGG:KPK_2874 NR:ns ## KEGG: KPK_2874 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 89 1 89 89 167 100.0 1e-40 MKLSLWTGAALLLCSTTVLAAPDSCERVKSDIQQKIINNGVPETAFSLAIVPNDQADQPG VQVVGHCANDTFKITYTRNSDSPAENDAQ >gi|289777623|gb|GG745508.1| GENE 1476 1583489 - 1585924 2653 811 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 811 1 808 808 1477 85.0 0 MSNQESPGGVTRRALLKTTALSSLALAAGGLTLPFTLRSAAAAVQQATGDITRVVWGACS VNCGSRCALRLHVRDDEVVYVETDNTGDDRYGDHQVRACLRGRSIRRRINHPDRLNYPMK RVGKRGEGKFERISWQEALDILADRLKSTVAQYGNEAVYINYSSGIVGGNITRSSPSASP VARLMNCYGGSLNQYGTYSTAQIACAMPYTYGSNDGNSTSDIENSKLVVMFGNNPAETRM SGGGITWYLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLINE DLVDQPFLDKYCVGYDEKTLPVGAPANGHYKAYILGEGDDGVAKTPQWASRITGIPADRI IKLAREIGMSKPAYICQGWGPQRQANGELSARAIAMLPILTGNVGINGGNSGARESTYTI TIERLPVLENPVKTAISCFTWTDAIARGPEMTATRDGVRGKEKLDVPIKFLWNYAGNTII NQHSDINKTHEILQDESKCETIVVIDNFMTSSAKYADLLLPDLMTVEQEDIIPNDYAGNM GYLIFIQPATSAKFERKPIYWILSEVAKRLGDDVHQRFTEGRTQAQWLQHLYAKMVAKDP ALPGYDDLKQMGIYKRKDPNGHFVAYRDFRRDPESHPLKTPSGKIEIYSSRLAEIAAHWQ LEKDEVISPLPVYASTFEGWDDPLRSQYPLQLFGFHYKARTHSSYGNVDVLQAACRQEVW LNPLDAEKRGIKNGDMVRVFNQRGEVRLPAKVTPRIMPDVSAMGQGAWHDANMAGDRIDH GACMNTLTTHRPSPLAKGNPQHTNLVDIEKV >gi|289777623|gb|GG745508.1| GENE 1477 1585935 - 1586552 842 205 aa, chain + ## HITS:1 COG:STM0965 KEGG:ns NR:ns ## COG: STM0965 COG0437 # Protein_GI_number: 16764326 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 205 1 205 205 382 91.0 1e-106 MSTQYGFFIDSARCTGCKTCELACKDYKNLTPEVSFRRIYEYAGGDWQEDNGVWQQNVFA YYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVNEAVCIGCRYCHMACPYGAPQYNADK GHMTKCDGCHERVAEGKKPICVESCPLRALDFGPIAELRAKHGQLAAVAPLPSAHFTRPS IVIKPNANARPCGDTTGYLANPKEV >gi|289777623|gb|GG745508.1| GENE 1478 1586554 - 1587411 973 285 aa, chain + ## HITS:1 COG:STM1496 KEGG:ns NR:ns ## COG: STM1496 COG3302 # Protein_GI_number: 16764841 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Salmonella typhimurium LT2 # 1 285 1 285 285 348 71.0 5e-96 MGSGWHEWPLVLFTVLGQCVVGATLVSGLGWLSLTNQREAQQRLVRSMFFIWLLMGIGFL ASVMHLGSPLRAFNSLNRVGASALSNEIASGALFFAVGGFWWLLAVLGKMPAALGKVWLV IAMLLGLLFVLAMTRVYQIDTVPTWYNGYTTSAFFLTVLLSGPLFAALLLRLAKVDFNGW FFAGLSVAALAIGAAVIIMQSAGLSTIHSSVQQAATLLPDYGTLQALRLILLALGLGCWL CPLIRRQPPRATGLLIGLLLVLIAECIGRGLFYGLHMTVGMAVAG >gi|289777623|gb|GG745508.1| GENE 1479 1587456 - 1588061 921 201 aa, chain + ## HITS:1 COG:STM1495 KEGG:ns NR:ns ## COG: STM1495 COG3381 # Protein_GI_number: 16764840 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Salmonella typhimurium LT2 # 6 201 7 204 204 227 66.0 1e-59 MPIPNRDAVALSARTLGALFSYAPNSAHIAPLVAAFQDGSWQQQWPFPVTAPLASAFAAS TEESLPEAWQRLFIGPWALPAPPWGSVWLDKESVLFGDSTLALREWMRTNGIALDAERNE PEDHFGTLLLLAAWLCETEQDALFAQLLAWHLLPWSGRFLSVFVDHAAHPFYQALGQLAQ ATLAQWQENLPIAVAEKALYR >gi|289777623|gb|GG745508.1| GENE 1480 1588231 - 1589490 1629 419 aa, chain + ## HITS:1 COG:ECs2298 KEGG:ns NR:ns ## COG: ECs2298 COG0038 # Protein_GI_number: 15831552 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 418 21 437 438 485 72.0 1e-137 MFRRLLIATLIGLLAALAVALFRHAMVVLETLFLGNDSGSLVNAAQSLPAWRRLITPALG GLTAGALLWLWQRRSIARPHAATDYMEALETGDGCFDTPASLVKSLASLLVVVTGSAIGR EGAMILLAALAASLFARRFTPQTEWKLWVACGAAAGMASAYHAPLAGSLFIAEILFGTLM LASLGPVVISSVIALLLTQFLNGGAAPLYHVVLQQNLSALHYGLMLATGLLAGLCGPLFI WLMDYSHRGFVKLKLTPPWQLALGGLIVGGLSLITPAVWGNGYSVVQSYLQIPPSGVLLA GVFLCKLLAVLASSGSGAPGGVFTPTLFVGLAMGMLFASVSGLWLPGNEEMAMMIGLTGM AAFLAATTHAPIMSTLMICEMTGQYALLPGLLITCVVASVLSRTLRRDSIYRHHVAEHV >gi|289777623|gb|GG745508.1| GENE 1481 1589443 - 1590138 768 231 aa, chain - ## HITS:1 COG:ECs2299 KEGG:ns NR:ns ## COG: ECs2299 COG0132 # Protein_GI_number: 15831553 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli O157:H7 # 1 229 5 233 235 402 88.0 1e-112 MFKRFFITGTDTSVGKTVVSRALLQALAARGKSVAGYKPVAKGSKETPDGLRNKDALVLQ SVSTLALPYEAVNPIALSEDESSVAHSCPINYGLLSDGLQRLAGQVDHVVVEGTGGWRSL MNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAH YAEIIDVLSKKLPAPLIGELPYLPRAEQRELSRYVDLDMLGNVMAIDRIPA >gi|289777623|gb|GG745508.1| GENE 1482 1590266 - 1591486 273 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 119 394 34 317 323 109 28 4e-22 MVADSQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRFAQLAPASITKIVREMLEAHLV QETEIQEPGSRGRPAVGLMVETEAWHYLAVRISRGEIHLSLRDLSSQLVVEDQLELALTD STPFLTRIIDHIDRFFIRHQKKLERLTSIAMTMPGIIDTENGIIHRMPFYEDVKDVPLGD VLANHTGVPVYIQHDISAWTMAESLFGASRGARDVIQVVIDHNVGAGVITDGRLLHAGSS SLVEIGHTQVDPYGKRCYCGNHGCLETIASVESVLELAQMRMAQSMSSLLHQRPLSVEWL CQAALQGDLLARDIISGVGNHVGRILAIMVNLFNPQKILIGSPFNLAADILFPAISSCIR QQSLPAYSQHIAVESTQFSNRGTMAGAALVKDALYNGSLLIRLLQG >gi|289777623|gb|GG745508.1| GENE 1483 1591611 - 1592513 218 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 245 1 239 305 88 28 9e-16 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQTGARLFARTNRSVSLT AAGKQFLADSRQILAQVDDAAARAARLHHGETGELRIGFTSSAPFIKAVSDTLSMFRQRY PDVHILTRETNTREQIVPLSEGALDLGLLRNTQLPDTLAWERVLREPLLAMVPADHPLAR QPSVSLAALAREPFVFFDPHVGTGLYDDILGLLRRYGHTPVIAQEVGEAMTIIGLVAAGL GVSILPASFQRVQLSEMRWLPIDEQDAVSEMWLVWSKHHEQGALAKRFRESLLAWKTEHN >gi|289777623|gb|GG745508.1| GENE 1484 1592644 - 1593894 1447 416 aa, chain + ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 415 1 415 417 628 85.0 1e-180 MSRTTTVDTVPAGEVSVAGASRPDQFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILP VLSNEFGVSPASSSISLSISTAMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTM MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLT GVFTDFFGWRVALAVISGFALAAAIMFWRILPESRHFRSTSLRPKNLLINFRLHWRDRGL PLLFVEGFLLMGAFVTLFNYIGYRLMMSPWSLSQAVVGLLSVAYLTGTWSSPKAGAMTVR FGRGPVMLGFTAVMLCGLLLTLFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARG QASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALLLLAALLTGTCLHQRLK >gi|289777623|gb|GG745508.1| GENE 1485 1593925 - 1594056 98 43 aa, chain - ## HITS:1 COG:no KEGG:KP1_2594 NR:ns ## KEGG: KP1_2594 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 43 1 43 43 67 100.0 2e-10 MIDYTGLEVRGWFMNPFTWLFIALLSVDAVRELMGLSSIMGMW >gi|289777623|gb|GG745508.1| GENE 1486 1594234 - 1595721 1924 495 aa, chain + ## HITS:1 COG:YPO2310 KEGG:ns NR:ns ## COG: YPO2310 COG2317 # Protein_GI_number: 16122534 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Yersinia pestis # 5 495 3 499 499 699 67.0 0 MTENTPYQQLTRTFQRLSRFSHLSAIAGWDMFAMMPPGGSAARGEALAELGVLQHQILTD KKVGQWLQEARQQDLNDVEQANLREMQRQYDQAALLPESLVEAKSLAGSRCEHAWRSQRP ANDWAGFADNLREVVKLSRQEAQIRADARGGSRYDALLDIFEPDMTSARLDSLFADLKSW LPSLLRQAVAKQATQTLLAPQGPFPIAAQRELGLQAMRILGFDFDGGRLDISAHPFCGGV PQDVRITTRYNENDLLSALFGVIHETGHARYEQNLPRPWVDQPVGLARSTAIHESQSLFF EMQLGRSEPFLNRLLPAVRERFGDQPAFSSDNFVAWNQRVKPGFIRVDADEVSYPAHVIL RYEIERALIDGEIEVDDIPALWDEKMQHWLGLSTTGNYRDGCMQDIHWTDGGFGYFPSYT LGAMYAAQLMAAARRALPTLDRDIAEGDFSALFDWLRQNIWQHGSRFSTSQLIQQATGED LNSRYFREHLTARYL >gi|289777623|gb|GG745508.1| GENE 1487 1595897 - 1596316 137 139 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAAAMGLSSAAFAADAVSTTQAPAATHSTAAKTTHHKKHHKAAAKPAAEQKA QAAKKHKKAEAKPAAAQKAQAAKKHKKVEAKPAAPQKAQAAKKHHKAAAKPVAQKAQAAK KHHKTTKHQAAKPAAQPAA >gi|289777623|gb|GG745508.1| GENE 1488 1596668 - 1596772 140 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKKGIRALVYVSLVSVAIWGATGYLVMEAVRVL >gi|289777623|gb|GG745508.1| GENE 1489 1597254 - 1598066 688 270 aa, chain + ## HITS:1 COG:STM1484 KEGG:ns NR:ns ## COG: STM1484 COG3591 # Protein_GI_number: 16764829 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Salmonella typhimurium LT2 # 1 268 1 271 273 395 75.0 1e-110 MRRDVLLLLCSFYLLPLGAHADDSGLSAKDIKTLFFGHDDRKAVSHPEESPWDAIGQLET ASGNLCTATLISPHLALTAGHCLLTPPHGKPDKAVALRFISRKGGWVYEIHGIEGRVDPA LGKRLKADGDGWIVPSVAAPSDFGLIVLRYAPSGITPIPLFPGSKADLTSALKAADRKVT QSGYPEDHLDNLYSHQDCIVTGWAQNSVLSHQCDTLPGDSGSPLLLKTEDGWQVIAVQSS APGPQDRWRADNRAISVTGFRDKLEALAGE >gi|289777623|gb|GG745508.1| GENE 1490 1598067 - 1600169 2038 700 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 269 688 330 751 776 263 41.0 1e-69 MIFLAGLGLTASVISLLYLSQHLIASKSNEIDQQRSVLSVEGAVQTSVNRVLSLVLDNAI WDDAVTQTYAPSLDQKWLYDSWGSGFKINNLYDGTFVLDEHYRILWGAFQSQVLPRTDLS FLGAGLTSLIHTHAQALREGKNAFAGITRTEAGIAFVGIGLIRPTTGRLQVFDATRRYLV ITRHINPQLLERLGDTFQIRHLHLAEGPGAYRIPLRTQADEVLGYLAWQPRLPGAEAAQA SSGSMGLIAGVAASLILLFILFSSLGMYKLARGERQAREIAMIDWLSRLPNRRALLLRLS QVCETGKHDIQCVVFIDLDGFKDVNDNYGHDVGDALIRHIASALQTRVPTGAMLARMGGD EFAMAVSGAKAIDRAAAFAWAALELLKAPVTLSKRKIYIGASIGIASGAPAECSSTELFR RADIAMYHAKKSGKGRTAWYDDALDAVRRHQLMIENGIRQGLEQDEFEVWYQPVVDADTL AMTGVEALLRWPRRPQGALAPDAFIAIAESSGLIDALGQFVLQRACSDLQPVDDLLLSVN ISPAQFRDPAFENRVMKTVAACRFPPSRLQVEVTESYVLENPERSQAVVENLKAQGIAVA LDDFGTGYSSIGYLRRFRFDSLKIDKSLAGRVDSDEQAAEMVRGTVRIARALGMTVVAEG VEDPQQLALLRRAGCDRFQGFYFSKPMPIVDLLQRRQPQG >gi|289777623|gb|GG745508.1| GENE 1491 1600331 - 1600660 606 109 aa, chain - ## HITS:1 COG:STM1483 KEGG:ns NR:ns ## COG: STM1483 COG2076 # Protein_GI_number: 16764828 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 145 86.0 2e-35 MQQFEWIHAAWLAVAIVLEIIANVFLKFSDGFRRKVYGILSLAAVLGAFSALSQAVKGID LSVAYALWGGFGIAATIAAGWVLFGQRLNNKGWAGLILLVAGMVLIKLA >gi|289777623|gb|GG745508.1| GENE 1492 1600647 - 1601009 348 120 aa, chain - ## HITS:1 COG:ECs2306 KEGG:ns NR:ns ## COG: ECs2306 COG2076 # Protein_GI_number: 15831560 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 3 120 4 121 121 138 80.0 3e-33 MFYWILLALAIVAEITGTLSMKWASVSGGHTGFILMLAMIALSYIFLAFAVKKIALGVAY ALWEGIGILLITVFSVLLFDESLSPLKIAGLTTLVVGIVLIKSGTQKKASSKQEVAHAAV >gi|289777623|gb|GG745508.1| GENE 1493 1601487 - 1602485 1628 332 aa, chain + ## HITS:1 COG:STM1481 KEGG:ns NR:ns ## COG: STM1481 COG0628 # Protein_GI_number: 16764826 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 331 13 343 344 414 82.0 1e-116 MVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLVRCRVPRVLAISMLIGLI VMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRMGFTVSVVELNKYIDPNA VMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPAKLQQLMSRPVEGMGAIQRAIDS VSHYLVLKTAISLVTGLVVWGMLVLLDVRFAFMWGLLAFALNYIPNIGSVLAAIPPILQV LVFGGLYEALVVLAGYLIVNLVFGNILEPRVMGRGLGLSTLVVFLSLIFWGWLLGPVGML LSVPLTIIAKIALEQTSGGQSIAFLLSDVSKE >gi|289777623|gb|GG745508.1| GENE 1494 1602711 - 1604366 2181 551 aa, chain + ## HITS:1 COG:no KEGG:KPK_2894 NR:ns ## KEGG: KPK_2894 # Name: mdcA # Def: malonate decarboxylase, alpha subunit # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 551 1 551 551 1137 100.0 0 MNAEQTTARVWNRRRTEKQRRLAEAKIAGKVIPTDQLVSVLENLLAPGDRVVLEGNNQKQ ADFLSRMLAEVNPQKIHDLHMIMPSVGRSEHLDLFEKGIARKLDFSFSGTQSLRISQLLE DGLLEIGAIHTYIELYSRLYVDLSPNVALIAGYKADRKGNLYTGPSTEDTPALVEAAAFH DGIVIAQVNELVDDECDLPRVDIPGSWIDYVVVADKPFFIEPLFTRDPRLIKQEHILMAM MAIKGIYAEHQVQSLNHGIGFNTAAIELLLPTYGEQLGLKGKICKHWTLNPHPTLIPAIE SGWVESVHCFGGELGMEEYIRARPDIFFTGPDGSMRSNRAFCQLAGQYAVDMFIGSTLQV DGLANSSTVTRGRLSGFGGAPNMGHDPHGRRHATPAWLNMITEPDPMQRGKKLVVQMVET FQAGVKPTFVETLDAVEVAKTSGMPLAPVMIYGDDVTHVLTEEGIAYLYRAESLEERRAM VAAVAGITDIGLGVDAKRVAALRQSGKVVYPEDIGIRRSDATRSLLAAGSVADLVEWSDG LYNPPAKFRSW >gi|289777623|gb|GG745508.1| GENE 1495 1604366 - 1605208 835 280 aa, chain + ## HITS:1 COG:PA0209 KEGG:ns NR:ns ## COG: PA0209 COG1767 # Protein_GI_number: 15595406 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Pseudomonas aeruginosa # 16 278 19 282 293 209 58.0 5e-54 MKNLSPLHAESRVSWLAHTASACLIDEARLSPKPGLVDSRGNGAHQDLNLDLMERSARSL QPTFHALAQQSWQRPADIALRETVGRLGREGEAQMMMATGGVNTHRGAIWALGLLVSAVA MLGGEGQSQAIAAAAAALARLPDGFAPKSFSKGLRASRRWQVPGAREEAQRGFPHVTTLA LPQLQQSRARGASEPQARLDALMAIMTSLSDTCVLSRAGMNGLHAMQQGAREVLAAGGCA SVAGRAALARLDAQMLAHNASPGGAADLLAATLFLDRVSG >gi|289777623|gb|GG745508.1| GENE 1496 1605226 - 1605525 335 99 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2797 NR:ns ## KEGG: Kvar_2797 # Name: not_defined # Def: malonate decarboxylase acyl carrier protein # Organism: K.variicola # Pathway: not_defined # 1 99 1 99 99 182 100.0 5e-45 MEQITLSFPANRALSGKALAGVVGSGDMEVLYTAAQGATLNVQITTSVDNSQARWQALFD RLNLINGLPAGQLIIHDFGATPGVARIRIEQVFEEAAHA >gi|289777623|gb|GG745508.1| GENE 1497 1605518 - 1606351 1341 277 aa, chain + ## HITS:1 COG:PA0211 KEGG:ns NR:ns ## COG: PA0211 COG0777 # Protein_GI_number: 15595408 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Pseudomonas aeruginosa # 5 272 11 278 287 348 70.0 7e-96 MRNDRSFIELRARERAHALLDDGSYRELLDPFEGIMSPWLGAQGIVPQSDDGMVVAKGTI NGQPAVVIAIEGTFQGGSMGEVSGAKMAAALELAAEDNRNGIPTQAVLCLETGGVRLQEA NLGLAAIADIHAAIVDLRRYTPVVGIITGTVGCFGGMSIAAALCSYLIVTREARLGLNGP QVIEQEAGIEEYDSRNRPFIWSMTGGEIRAASGLVDALVNDGVNAVKTAMNEAIAKGVPV QHRSDNYDDYLRRLSQFDTRQQADTAQIKQLFAREDK >gi|289777623|gb|GG745508.1| GENE 1498 1606351 - 1607151 1014 266 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2799 NR:ns ## KEGG: Kvar_2799 # Name: not_defined # Def: malonate decarboxylase, subunit gamma # Organism: K.variicola # Pathway: not_defined # 1 266 1 266 266 476 99.0 1e-133 MSQFPNRAALWLNKLAPDAPLMSGLCPSVQVADGQIAGESVRFIAVVPDANNHYPRAAGG EVGLLEGWTLAKVVNETIAADADQPVKRPIVAVIDVPSQAYGRREEAFGIHQALAGAAGA YAKARLAGHPVIGLIVGKAMSGAFLAHGYQANRLIAFNDSGVLVHAMGKESAARITLRTV EALEKLAATIPPMAYDVSNYATLGLLSALLDINNPDAPDEGDLSLVSRTLRDAIADARKD TSLKCRLGAENRRSSQLVRDRMRASW >gi|289777623|gb|GG745508.1| GENE 1499 1607288 - 1608247 218 319 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 [alpha proteobacterium BAL199] # 4 315 3 308 312 88 25 9e-16 MTYVIIHALAPIFVIMLLGFWAGKAGMVDNKNVSLLNIFVMDFALPATLFSATVQTPWAG IVAQSPLVLVLTGAMWITYAAIYFLATSVFKRTPQDAAVLTLTVALPNYAALGLPILGSV LGEGASTSLSVAVSIACGSVLMTPFCLLILEREKARAAGENSGSTLAMLPVLMWRSVKKP IVWGPLLGVVLSAIGIKMPEMLLASIKPLGLAATAAALFLTGVILSARKLQLNTLIATST IVKLLVQPFIAWGLVMLLGLHGSIAITAILMIALAAGFFGVVFGNRFGVQSPDAEAVLLL SSVLCILSLPLFISLTSGL >gi|289777623|gb|GG745508.1| GENE 1500 1608251 - 1608868 749 205 aa, chain + ## HITS:1 COG:no KEGG:KPK_2900 NR:ns ## KEGG: KPK_2900 # Name: mdcG # Def: phosphoribosyl-dephospho-CoA transferase (EC:2.7.7.61) # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 205 1 205 205 363 99.0 3e-99 MSSTPRPHDLLWLNHASALEAIAEPWVAQQWRAALPVVVRRDVDDQARIPVGVRGMKREQ RAAGWVQAHNIVRCVTPEMLVERERLLGSPFVSQPPVQAAIALTLHPWSWRWGVTGSTGY ALATEIPVLHAASDLDLLIRAPQPLDREALREWQARVAQLPCRADTQVETPYGAFALNEW LRDGRALLKTSHGARLTATPWHREE >gi|289777623|gb|GG745508.1| GENE 1501 1608868 - 1609770 985 300 aa, chain + ## HITS:1 COG:PA0214 KEGG:ns NR:ns ## COG: PA0214 COG0331 # Protein_GI_number: 15595411 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Pseudomonas aeruginosa # 1 272 1 280 310 247 58.0 2e-65 MKILFTFPGQGGQRPGMLAAIPDREAIFTQARAVLGDEVATLDSTDALQHTRAVQLCLLI AGVAWARELQRQGVDPQMVSGLSIGAFPAAVIAGALDFASALRLVALRGDLMEQAYPEGY GLTAIMGLTRPRVEALMQGHEVYLANLNAETQIVIAGRDEAMAEVAQLALRAGASKAQRL AVSVPSHCALLDKPAAALAKAFADVTLTRPQRAYLSGSTARVLWDPQRIADDLAMNMART VHWQEAMIAADERDARLAIEMPPGGVLTCLTRQAGWRGETISLERSGVDVARHLAQRLSD >gi|289777623|gb|GG745508.1| GENE 1502 1609760 - 1610686 1408 308 aa, chain - ## HITS:1 COG:PA0217 KEGG:ns NR:ns ## COG: PA0217 COG0583 # Protein_GI_number: 15595414 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 303 3 300 309 262 46.0 5e-70 MKDDINQEITFRKLSVFMMFMAKGNIARTAEAMKLSSVSVHRALHTLEEGVGCPLFVHKG RNLLPLQAAWTLLEYCQDVMSLMSRGLEATRKVAGVGQGRLRIGTLYSLTLETVPRIIMG MKLRRPELELDLTMGSNQMLLDMLEDDALDAILIATNEGEYNHSAFDVVPLFEDDIFLAA PATEQLNTTQLADLRDYADRKFVSLAEGFATYAGFQEAFQVAGFEPEIVTRVNDIFSMIS LVQAGVGFALLPGRMKKVYENDVQLLKLAEPYQMRQLISIVYSHHRERDADLLALAAEGR MYARSINR >gi|289777623|gb|GG745508.1| GENE 1503 1610845 - 1612500 1973 551 aa, chain - ## HITS:1 COG:yojH KEGG:ns NR:ns ## COG: yojH COG0579 # Protein_GI_number: 16130147 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 4 551 1 548 548 729 66.0 0 MPAMKKTIISITALAMFVSAATHAEADTSKKTDFLLIGGGIMSASLGTWLQALQPDWNLT MVEKLDGVALESSNGWNNAGTGHSANMELNYTPERADGSIDVSKALDINEQFMISRQFWS AQVKRGILHDPHSFINSTPHMSFVWGDNVDYLQKRYNALQQTTLFQGMKFSTDHAQIKQW APLVMEGRDPQQKVAATWTPVGTDVNYGEITRQLIGSLKKNNHFTLQTSSEVTDFKRNAD NSWHVTIKNVQSGDAQTIDAKYVFIGAGGGALKLLQKTGIPEADNYAGFPVGGSFLMTEN PELTKLHQQKVYGQASVGAPPMSVPHLDARYLDGKRVVLFGPFATFSTKFLKNGSFFDLL STTTTSNVLPMTHVGLDNFDLVKYLISQVMLNDDDRFAALKEYYPNARKEDWKLIQAGQR VQIIKKDAEKGGVLKLGTEVVVDQQKTISALLGASPGASTAAPITLNVLKQMFPQQFNSP EWQSRIRAIVPSYGEKLNGNVALTQQVWDDTAAALQLTKPPVIQMPAAAPTATAKPAEPP RDASPQHDMAL >gi|289777623|gb|GG745508.1| GENE 1504 1612763 - 1613686 862 307 aa, chain - ## HITS:1 COG:VC0690 KEGG:ns NR:ns ## COG: VC0690 COG2103 # Protein_GI_number: 15640709 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Vibrio cholerae # 3 298 8 306 307 205 41.0 7e-53 MNSSLTAAMQARRHPDTTHIDRLATADMLAMLHQDDKQISEAVGACLPDIARLIDVATAT MGRGGRLVIIGAGASGRTAIEAVSDYSPEGKHALVGLIAGGQTAAMAERETAANNYDLGA FELQSLDFSNHDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVVTQQAASEAAQLADIIIA PQTGPEAVAGLANPKAQLAQRQIVNMLTTGLAIRDGRVYSNLRVDVQADNSHWAERQIAI VMAATDCTRSEAKAALASCHQHCRTAILMLLSGLDAWHARELLTQHHNHLRLALREAQRS STTTPAH >gi|289777623|gb|GG745508.1| GENE 1505 1614134 - 1615675 1932 513 aa, chain + ## HITS:1 COG:ECs5107 KEGG:ns NR:ns ## COG: ECs5107 COG3290 # Protein_GI_number: 15834361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli O157:H7 # 1 510 24 540 543 588 56.0 1e-167 MIGSVIGAVLLLVYALWYMQISNATRDGLKETALAVARTMADMPQVKRGLEAPPQQQIIQ PLAQAITRRNDLLYAIVTDMHGIRYSHPDTSIIGKRFIGRDILPTLQGKENVAINHGVLA PALRVFTPVFNDQHQQIGVVVVGISLSKVDEQIANSRWDVLLTILFSALVCALGTWSLVR GLKRVLLGLEPQEISTQFQQRQAMLHALKEGVVAVDAHGEVNLINPAAQEILFSGPDKTL AHTPLLADLQTVLQSGEPMYDRELGCNGLLLIGNTVPIRNQEAVVGAICTFRDKTEVSQL LQRLDGMMSYVDALRTTSHEFMNKLHVILGLLNMKSYGKLEEYVLQTAHRYQADIGDIQH RIKSPVVAGFLISKIQRATECGFTLTLAEESLVPDCPNEKQVTVLVTVLGNLIENALDAM SGQAEGEIGLLLHYQDGWLSGEVSDDGPGIPENNIDAIFNKGFSTKGENRGVGLFLANQQ LRELGGTLAVESEPGVFTQFFVHLPWDSKRKRA >gi|289777623|gb|GG745508.1| GENE 1506 1615672 - 1616391 274 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 225 1 222 226 110 34 3e-22 MINVLIVDDDAMVAELNRLYVARVPGFRCSGSASTLSQAQEMINDKQREIDLVLLDVYMQ QDSGLDLLPTIRESGRAIDVIMITSAADAATVQTAMHYGVVDYLIKPFQFPRFEEALTTW REKRKLMTGQPYYEQADVDRLLHGGAPEASDARKLPKGLTAQTLRTLCQWIDAHPDVEFS TDELAAAVNISRVSCRKYLIWLAQINILYTTIHYGATGRPVYRYRLVAEQYSLLKQYSQ >gi|289777623|gb|GG745508.1| GENE 1507 1616372 - 1617322 1195 316 aa, chain - ## HITS:1 COG:SPy1138 KEGG:ns NR:ns ## COG: SPy1138 COG1477 # Protein_GI_number: 15675115 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 13 304 9 309 312 236 42.0 5e-62 MSDNRVYSYSAVLMGSPILLKLYSHDESLASRVFQLIKRYEDLLTVNRAESQVMDINHAA GRHPVTVSRPVFQLIQCAKAASMVRDSAFNLAIGPLVKLWRIGFQGHSVPDAADIRARLA LTRPQEVILDEATCSVFLQQPGMELDLGAIAKGYIADRVRDYLRQQQVAKALINLGGNVH TLGEWTIGLKKPFADAQALIGSLTINGQSVVTSGTYERYFEQDGKRWHHILDPRSGYPLD NELDSVTVISTDSLDGDIWTTLLFGLGVEKGCAALRQREDIDAIFVTKNRDIILSSPQRL RFAPLDSGYQVIDCTA >gi|289777623|gb|GG745508.1| GENE 1508 1617537 - 1620314 3524 925 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 482 924 59 499 502 478 55.0 1e-134 MTSNERILQPFTLPNGTELKNRLLMAPMTTCTGYFDGTVTSELVEYYRARAGSIGTIIVE CCFIDDYGLAFPGAIGIDNDEKIAGLAKIAEAIKAQGSKAILQIYHGGRMVDPQLIGGRQ PVAPSAIAAPREGAAMPRALSGEEVEGMIAKFGDGVRRAILAGFDGVEIHGANTYLIQQF YSPNSNQRDDEWGGSRDNRARFPLAVLDITHKMARQYADDAFIIGYRFSPEEMEVPGIRF DDTMYLLEKLAARGVDYLHFSVGATLRPSIVDTSDPTPLIEKYCAMRSETLAQVPVMGVG GVVNVADAELGLDHGYDLIAVGRACIAYPDWAARIAAGEELELFIDSTQREALHIPEPLW RFSLVEAMIRDMSMGDAKFKPGMFVETVQDDANELVINVSLENDHIADIELAASPVQTVE FTTSFEEIRERILTANTPHVDAISGATSQSEAVKKAVAKAMLKSSKALAAEEGGNDAAPK SYDVVVVGSGGAGLAAAIQAHDEGASVLIVEKMPTIGGNTIKASAGMNAAETRFQRVKGI QDSKELFYQETLKGGHNKNNPQLLRRFVENAPQAIEWLADRGIMLNDITTTGGMSIDRTH RPRDGSAVGGYLISGLVRNITKRGIDVLLDTSVEEILMSGDEVSGVRLVNDEKEVIEVQT KSIVVATGGFSANSAMVVKYRPDLDGFVTTNHKGATGSGIALLERIGAGTVDMGEIQIHP TVEQQTSYLISESIRGGGAILVNQQGNRFFNEMETRDKVSAAIIALPEHYAYIVFDEHVR AKNKAADEYIAKGFVTSASSPRELAEKLGMDYHAFLATLECYNGAVEKQHDEQFGRTTAL RAPINEGPFHAIRIAPGVHHTMGGVTINTDGEVLNVDQQPIHGAYAAGEVVGGIHGGNRI GGNAVADIIIFGTLAGHQAAKRARG >gi|289777623|gb|GG745508.1| GENE 1509 1620956 - 1622467 2219 503 aa, chain + ## HITS:1 COG:STM0618 KEGG:ns NR:ns ## COG: STM0618 COG0471 # Protein_GI_number: 16763995 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 20 501 4 485 487 453 49.0 1e-127 MKEKKTTIPPAGAVNPTTATKKRLLMMALPIIVAVLLLFVPVPDGLPPYAWHYFAIFVGV IVGLIFEPLPGAVIGITGVVVIALCSQWLLFSPEQMAAPSFKLAGASFKWAVSGFGNSTV WLIFGAFMFAAGYDKTQFGRRLALILVKYLGRRSLTLGYAITFADLLLAPFTPSNTARSG GTIYPIIANLPPLYGSKPNDPSARKIGSYLMWVAITAACITSSMFLSALAPNLLALALVK SIVGINISWGTWFIAFLPLGVLLILTMPLLAYWFYPPEVKINNEVPLWAARELEKLGKLS RNEILLLVFVCFALMMWIFAADWIEPALAALLVIVLMLWTGVLSWSDITNNKAAWNTFVW FATLVALADGLSSTGFIAWLGKEGGALMGGISPGVATIVLLLAFYLLHYLFASTTAHTTA LLPAMLTIAATIPGMNMEVFVLLMVTSLGVMGIITPYGTGPSPIYYGSGYLPTKDYWRLG TIFGAIFLAALLLIGYPWMSMMF >gi|289777623|gb|GG745508.1| GENE 1510 1622522 - 1624174 483 550 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 57 531 16 482 508 190 32 2e-46 MSTKPFVYQDPFPLAHDDTEYYLLSKEHVSVAEFDGQPVLKVEPQALTLLAQQAFHDAAF MLRVSHQQQVASILLDPEASENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQR VWTGGGDEAALAQGVYNTYTEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYSVDGEEYKF LCMAKGGGSANKTYLYQETKALITPAKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAEA TLKTVKLASTRYYDGLPTEGNEHGQAFRDVQLEQELLQEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPIGMGVSCSADRNIKAKINRDGIWIEKLESNPGKYIPEHLRQQGEGNVVS INLNQPMSEILAQLSAHPVSTRLSLNGTIIVARDIAHAKLKELIDNGEALPQYVKDHPIY YAGPAKTPTGYASGSLGPTTAGRMDSYVDLLQSHGASMVMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQQSIKSLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQN KQCAGCQQHG >gi|289777623|gb|GG745508.1| GENE 1511 1624357 - 1625955 2019 532 aa, chain + ## HITS:1 COG:sll0590_2 KEGG:ns NR:ns ## COG: sll0590_2 COG0668 # Protein_GI_number: 16331818 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Synechocystis # 280 527 3 252 264 135 33.0 2e-31 MILWALALLVLKPALAAEPRQQPTAREQARTVTIFHQPVVMLQATFGQTTPEERVLRTRS ALRAFTEDDIRQPLRVVAVNRYGQPGRLFLMNGKPVLLLSQADLDEGDDLTLDQAAQRVL ARMEAQRTSLQEQFNDRYLLLSAGKALAGGLLLALFYYGAFRAWRRVRRFFLLRILEKRS AIPQHWRRYLGNIEVRLYAVLVILVGMLASYLWLSWAFSLFPWTRVWSESLGDWSLGVIR DLSLSIVASLPGLMIVVLIFLITWLIIRLVKVALDQVAAGRIQVPGIHPETVSATRRLIS VVIWLFALSAAYPFLPGANSLAFKGISVFFGLMLTLGSTGVMTHAMSGLVLIYSRALRKG DWIRLADNEGQVSEIGVLATKILTRENYIVTVPNAVVVSGKIINLSAESTDGGFNLTTSV TIGYDTPWRQVHALLELAARRTPGVDQQIAPIVRKLGLLDWYTAYELQVRLLPTTKLPDG RNALHSSIIDVFNEFGVQIMSPNFVMQPKAAVVVPQEAWYAAPAVAPQEPEK >gi|289777623|gb|GG745508.1| GENE 1512 1627267 - 1627656 555 129 aa, chain - ## HITS:1 COG:PA0232 KEGG:ns NR:ns ## COG: PA0232 COG0599 # Protein_GI_number: 15595429 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Pseudomonas aeruginosa # 1 124 1 124 133 183 66.0 8e-47 MEDKQRYQDGMTVRRKVLGDAHVDRTLQHLTPLNDEFQDFITRYAWGETWTRPGLDHHTR SMITIAMLIALNREAELKMHLRASFNNGVTRDELKELIMHSALYCGLPAANATMHLAQQV FDDIDAAQG >gi|289777623|gb|GG745508.1| GENE 1513 1627646 - 1628413 922 255 aa, chain - ## HITS:1 COG:PA0231 KEGG:ns NR:ns ## COG: PA0231 COG0596 # Protein_GI_number: 15595428 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 2 248 10 260 263 217 48.0 1e-56 MNLDYQLDGPEGAPVIVLSNSLGTTRAMWQPQIEALTAHFRVLRYDTHGHGNTTKNGKVT LAQLGEDVIALLDHLNIDRAWFCGISMGGLTGLWLGRFAPERFYGLAVANTAARIGDQAS WLSRARAVRQEGMAVVAAGAADRWFTHAFRQKAPEVVEALCHQLTHTDVEGYAACCEALA AADLRGEVGQIPLPTLIIAGESDPVTTVSDASFLQQQIPASQVVVLAASHLSNIEAPKSF TSALLSFFQGERHGG >gi|289777623|gb|GG745508.1| GENE 1514 1628403 - 1629737 1853 444 aa, chain - ## HITS:1 COG:PA0230 KEGG:ns NR:ns ## COG: PA0230 COG0015 # Protein_GI_number: 15595427 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Pseudomonas aeruginosa # 4 438 16 450 459 379 57.0 1e-105 MLRSSPLTDWFSDAQRVQGMLDFEAALAQAQAVCGMVPPEAVGPIVAACRHETIDFAALG EAAVGAGNLAIPLVKQLTAQVKARDPEAARYVHWGATSQDAIDTGLVLQLRGALDAAETL LEQLVAALALQADRYRDTVMPGRTWMQHALPVTFGLKLAGTLDALLRWQQRLREMRPRLL VLQFGGAAGTLDALKEKGPAVGQALAQNLGLSLPDTPWHSQRDRLLEAGAWFAGVCGTLG KFANDFSLLMQTEVAEVGEPVAEGRGGSSTMPHKRNPVACAAILTAAQRTPGLMATLYAS QLQQHERALGGWQAEWETLPDLITLVGGALAQSEALVRDMQVFPQKMRADLDITHGLIMA EAVTLALAEFIGKAEAHHHIEALCRQALDRHSPLVDLLAADPQVSQYLSRERLTTLLDPA TATGSAERFVRQVLARYQEQRDES >gi|289777623|gb|GG745508.1| GENE 1515 1629765 - 1630967 1536 400 aa, chain - ## HITS:1 COG:RSc2252 KEGG:ns NR:ns ## COG: RSc2252 COG0183 # Protein_GI_number: 17546971 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 1 400 1 400 400 531 73.0 1e-151 MNQAFICDAVRTPFGRFGGTLATMRADDLAALPLKALLERNPGLDPSRIDDVIFGCANQA GEDNRNVARMALLLAGLPESVPGSTINRLCGSSLDAIGVAARAIKSGETQLMIAGGVESM SRAPFVMGKAESAFSRSMQMEDTTIGWRFINPQMKALYGVHSMPETAENVADEFAISRAD QDAFALRSQLRTAAAQEAGRFADELIAVQVPQRKGEPLLFSRDEHPRSTSLEALAKLRGV VRADGSVTAGNASGVNDGACALLLASETALAAHDLQPLARVVGVATAGVAPRIMGFGPAP AVRKVLAQTGLTLAQMDVIELNEAFAAQALAVTRDLGLPDDAAHVNPNGGAIALGHPLGA SGGRLAMTAAYQLKRTGGRYALCTMCIGVGQGIALIIERV >gi|289777623|gb|GG745508.1| GENE 1516 1630978 - 1631634 1126 218 aa, chain - ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 1 209 9 217 220 315 72.0 5e-86 MQKLTRDEMAQRVARDIPEGAYVNLGIGLPTRIANYLPADKEVFLHSENGLLGMGPKPQP GEEDPELINAGKEYVTLLQGGCYFHHGDSFAMMRGGHLDICVLGAYQVSASGDLANWSTG APDAIPAVGGAMDLAIGARQVFVMMDHLTRDGECKLVAQCSYPLTGVGCVSRIYTDLAVI DITDRGPVVREIFNGLSFEELQCITPVALTFEQLAESA >gi|289777623|gb|GG745508.1| GENE 1517 1631645 - 1632331 970 228 aa, chain - ## HITS:1 COG:RSc2254 KEGG:ns NR:ns ## COG: RSc2254 COG1788 # Protein_GI_number: 17546973 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Ralstonia solanacearum # 1 216 1 216 229 303 71.0 2e-82 MIDKSVSTLSEAIAGIHDGATIMIGGFGPAGQPTFLIDALIDQGARDLTIINNNAGNGEV GLAALLKAGRVRKMICSFPRQVDSQIFDDLYRRGKVELELVPQGNLAARIQAAGAGLGAV FTPTGYGTPLAEGKETREIDGRHYVLEYPIKADFALIKAHQGDRWGNLVYRKAARNFGPI MATAAKTTIVEVSQLVPLGDLDPEHIITPGIFVQRVFSLENLTAAQRA >gi|289777623|gb|GG745508.1| GENE 1518 1632501 - 1633307 1094 268 aa, chain + ## HITS:1 COG:PA0155 KEGG:ns NR:ns ## COG: PA0155 COG1414 # Protein_GI_number: 15595353 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 14 267 24 277 279 241 52.0 1e-63 MDKHPDDLLTGDGDPFKGDPNFMASLARGLEVIQAFTPQRPLLSISQISQKTGIPRAAVR RCLYTLSKLGFVYAEDGKNFQLRPRILALGHAWLASTPLARSAQPVLRHLSEMLNESCSI ATLDGDDILYIARASSSRIMTIDLDIGSRLPAWATSMGRVLLSHQPEEKLNDMLARVTMI RYTPQTVDSVAKLRAELKRVHQQGYALNDQELEMGLRSLAVPLFNAQGQVQAALNVGVHA GQMSAREMIDRVLPELQKAARELTLLLR >gi|289777623|gb|GG745508.1| GENE 1519 1633304 - 1633867 791 187 aa, chain - ## HITS:1 COG:ECs1924 KEGG:ns NR:ns ## COG: ECs1924 COG2840 # Protein_GI_number: 15831178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 317 80.0 6e-87 MNLDDKSLFLDAMEDVQPLKRKNDVHWHPGRNSRAPQRVDTLQLDNFLTTGYLDIVPLAT PLEFKREGLQSGVLDKLRRGKYSQQASLSLLRQPVEQCRQMLFAFMVQAQKEGLRNVLIV HGKGRDDQSHANIIRSYLARWLEELPEVQAFCAALPHHGGSGACYVALRKSAEAKQETWE QHAKRSR >gi|289777623|gb|GG745508.1| GENE 1520 1633969 - 1634895 857 308 aa, chain - ## HITS:1 COG:ECs1923 KEGG:ns NR:ns ## COG: ECs1923 COG0583 # Protein_GI_number: 15831177 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 7 302 1 296 302 442 73.0 1e-124 MVITESMAFQIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVR RSQGVALTENGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVI CRFHQQHPQVKVRIMEGQLLAMINELRQGELDFTINTYYPGPYDHEFSFEKLFEKPFAVF ARAGHPAAQATSLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISL VVKSDFLSILPVELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLTASLITLFR RQSRQLFP >gi|289777623|gb|GG745508.1| GENE 1521 1635044 - 1635748 817 234 aa, chain + ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 234 6 239 441 347 75.0 1e-95 MPQLDEYLHQLAPAMIQWRRDFHLHAESGWLEFRTASKVAEILDGLGYQLALGRDVIDAD SRMGLPDEDTLAQAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDAL DLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIFQ PAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVH >gi|289777623|gb|GG745508.1| GENE 1522 1636040 - 1636420 477 126 aa, chain + ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 126 316 441 441 171 69.0 3e-43 MFERAQHVVAGAAAMYEARYELRMMGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAA PAGSEDATLMMARVQARGGLASYMIFGTQLSAGHHNEKFDFDESVMALAVETLARIALNF PWQRGV >gi|289777623|gb|GG745508.1| GENE 1523 1636420 - 1637865 1393 481 aa, chain + ## HITS:1 COG:abgB KEGG:ns NR:ns ## COG: abgB COG1473 # Protein_GI_number: 16129298 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli K12 # 1 481 1 481 481 739 75.0 0 MEAIFQFVDEMIETRRETYCAIADDIWDHPETRFEEYWSAQRLADALEAEGFQLTRDAGG IPNAFMASVGEGQPVIALLGEFDALAGLSQQAHCAEPTPSTPGANGHGCGHNLLGTAAFA AAVAAKAWLQQHGGAGTLRFYGCPGEEGGSGKTFMVREGLFDDVDAALTWHPEAWAGMFS TRTLANIQAAWRFTGTAAHAANSPHLGRSALDAVTLMTTGSNFLNEHIIEKARVHYAITD TGGVSPNVVQAQAEVLYLIRAPEMADAEQIFARIEKIAQGAALMTETQVSCRFEKACSSY LPNRTLEAAMYQAVCHYGPPAWSDEERAFAAAIRATLSANDINNSLNNIAGTSGEEGKTF ARRHRDTLLIDEVAPWAATDNVLAGSTDVGDVSWKAPVAQCFSPCFAVGTPLHSWQLVSQ GRTSIAHKGMLLAGKVLAATAIRLFSDSALLAASQQELRQVLAERPYRCPIPAEVSPSVL R >gi|289777623|gb|GG745508.1| GENE 1524 1637989 - 1639515 2087 508 aa, chain + ## HITS:1 COG:abgT KEGG:ns NR:ns ## COG: abgT COG2978 # Protein_GI_number: 16129297 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Escherichia coli K12 # 13 507 15 509 510 777 87.0 0 MSMSSIPSSSPGGKRYGWVEKIGNKVPHPFLLFIYLIVALIAATAILSAFNVGVQNPTDG SRVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGFAERVGLLPALMVKMASH VSARYASYMVLFIAFFSHISSDAALVIMPPLGALMFLAVGRHPVAGLLAAIAGVGCGFTA NLLIVTTDVLLSGISTEAAKSIDASLHVSVIDNWYFMATSVIVLTLVGGLITDKLVEPRL GQWQGSRDEKLQTLTPEERFGLRIAGVATLVFVAVVALMVVPENGILRDPVQHTVMPSPF IKGIVPLIIFFFFVVSLAYGIATGKIRRQADLPQLMIEPMKEMAGFIVMVFPLAQFVAMF NWSNMGKFMAVGLTDLLESAGMNGVPAFVGLALLSAFLCMFIASGSAIWSILAPIFVPMF MLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYRPDARLGTYYSLVLPYPLI FLAVWLLLLVGWYLVGLPIGPGIYPHLP >gi|289777623|gb|GG745508.1| GENE 1525 1639548 - 1639706 147 52 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2826 NR:ns ## KEGG: Kvar_2826 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 51 1 51 52 75 100.0 9e-13 MQYILTGVLVLIISGLAIHGLTLVFERVYKALFYKLASVDHAASKVKTKVSH >gi|289777623|gb|GG745508.1| GENE 1526 1639964 - 1640479 592 171 aa, chain + ## HITS:1 COG:STM1659 KEGG:ns NR:ns ## COG: STM1659 COG0350 # Protein_GI_number: 16765003 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 301 82.0 3e-82 MLTLLQDKMDTPLGPLWVLCDEQFNLRAVEWDEHRDRMETLLDVHYRQEGYQRVDCRNPG GLSSKLNDYFAGDLAIIDTLATATAGTPFQRQVWQALRDIPCGQVMHYGQLAEALGRPGA ARAVGAANGANPVSIVVPCHRVIGRNGTLTGYAGGVQRKEWLLRHEGYLLL >gi|289777623|gb|GG745508.1| GENE 1527 1640674 - 1641426 966 250 aa, chain + ## HITS:1 COG:STM1660 KEGG:ns NR:ns ## COG: STM1660 COG0664 # Protein_GI_number: 16765004 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Salmonella typhimurium LT2 # 1 250 15 264 264 486 97.0 1e-137 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGTGLHPSFAQALETSM VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENSDLLA QLAGQARNVA >gi|289777623|gb|GG745508.1| GENE 1528 1641565 - 1642515 1274 316 aa, chain + ## HITS:1 COG:STM1661 KEGG:ns NR:ns ## COG: STM1661 COG0589 # Protein_GI_number: 16765005 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 1 315 1 315 315 588 90.0 1e-168 MAKYQSMLVVIDPNQDDQPALRRAVYLHQRIGGRIKAFLPIYDFSYEMTTLLSPDERTAM RQGVIAQRTAWIREQAKFYIESGVPIDVKVVWHNRPFEAIIQEVISEKHDLLLKMAHQHD KLEAVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKALVAVNLASEENYHNTLNEKLVRET LSLAQEVNHTEVHLIGAYPVTPINIAIELPDFDPSVYNDAIRGQHLLAMKALRQKFGIDE KFTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVVDHLRCDLLVLK PEAYQTPVELDDDDDD >gi|289777623|gb|GG745508.1| GENE 1529 1642633 - 1642821 345 62 aa, chain - ## HITS:1 COG:no KEGG:Entcl_2247 NR:ns ## KEGG: Entcl_2247 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 62 1 62 62 89 80.0 4e-17 MDTELTPTQMAIEFLRRDTTVMTPAQYLKKLKLLELEFADLMALSSLELKEEIDLAWRLG IH >gi|289777623|gb|GG745508.1| GENE 1530 1642970 - 1644358 1938 462 aa, chain - ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 800 93.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSQQGNYFGIAGMAIALIATILGPDAGNVGWI ILAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLQHETGMEQILVNI HLTEVFLGIFIGAVTFTGSVVAFGKLRGKISSKPLMLPNRHKLNLAALVVSFVLMVIFVR ADSTGTQVLCLLVMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSSGGDEEVGEHREISAEETA EMLKNSQSVIITPGYGMAVAQAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLA EAKVPYDIVLEMDEINDDFSDTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNV VVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL >gi|289777623|gb|GG745508.1| GENE 1531 1644369 - 1645898 1782 509 aa, chain - ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 508 1 509 510 879 89.0 0 MRIGVPQERLAQETRAAATPKTVEQLLKLGFSVAVESGAGKLASFDDAAFTQAGAEIVTG NEVWQSDVILKVNAPNDDEIALLNPGTTLISFIWPAQNPQLMEKLAARNINVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSEAFIKAEMA LFAAQAKDVDIIVTTALIPGKPAPKLITREMVDSMKSGSVVVDLASQNGGNCEYTVPGEV VTTGNGVKIIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNIVIDFDDVVVRGVTV VREGEITWPAPPIQVSAQPQAAAKKVEAPKEAAKPVSPWRKYALIALAIILFGWLANVAP KEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL SFIAVLIASINIFGGFTVTQRMLKMFRKG >gi|289777623|gb|GG745508.1| GENE 1532 1646420 - 1647370 1168 316 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2833 NR:ns ## KEGG: Kvar_2833 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 316 1 316 316 531 100.0 1e-149 MKLKNTLLASALLTTATLSAHAATELTPEQAAALKPYDRVVVTGRFNAIGDAVQAVSRKA DKDGAASFYVVDTSDYGNGGNWRVTADLYKDNAPQADAPKNRIINGVVELPKDQAVTLMP YDTVTVQGFYRSQPEVNDAITKAAKAKGAYAFFIVRQVDANQGGNQRITAYIYKKDAEKR VLQSPDAIPADSDAGRAALAKGGEAAKNVEIPGVATTAAVGSGTGVGRFFETQSSKGGRY TVTLPDGTKVEEVNKVTAAQMVPFDNIQFTGNYGNMTEISYQTAKRAAKKGAKYYHITRQ WQERGGNITISADLYK >gi|289777623|gb|GG745508.1| GENE 1533 1647548 - 1648930 1646 460 aa, chain + ## HITS:1 COG:ydgI KEGG:ns NR:ns ## COG: ydgI COG0531 # Protein_GI_number: 16129563 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 460 1 460 460 704 88.0 0 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLL TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR LFGDGNTWQSIAGASVLLWVVHFLVLRGVQTAAGINLVATLAKLLPLGAFIALAALAFQL DTFRLDFRGLALGIPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS ALTVYLLVTLLSLGVVPRSELAGMRNPSMAGLMVNMMGSWGEIVIAAGLIVSVCGAYLSW TIMAAEVPFLAATHKAFPRLFARQNRNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLT IASEMILVPYLLVGAFLLKIATRPLHKAVGIGACIYGLWLLYASGPVHLLLSVVLYAPGL LVFLYARRTHQHDRSLKRRELALIGLLLVAAVPATWMLVG >gi|289777623|gb|GG745508.1| GENE 1534 1648967 - 1649689 1042 240 aa, chain + ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 374 77.0 1e-103 MAEQQPRPILITGGGRRIGLALAHHFLLQHQPVIVSYRTPYPAIDGLRDAGALCLQADFS SDDGILTFAEAVKSHTSGLRAIIHNASDWMAEKPGVALSTVINRMMQIHVHAPYLLNHAL EDLLRGHGHAASDIIHITDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEIKVNAIA PSLIMFNEGDDEAYRQQALDKSLMKIAPGEKEISDLIDYLFTSRYVTGRSFAVDGGRPLR >gi|289777623|gb|GG745508.1| GENE 1535 1649686 - 1650021 592 111 aa, chain - ## HITS:1 COG:ECs2313 KEGG:ns NR:ns ## COG: ECs2313 COG3136 # Protein_GI_number: 15831567 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 141 80.0 2e-34 MGLLIKGLLGALVVVLIGVLAKTKNYALAGLIPLFPTFALIAHYIVASERGIEALRATIV FGMWSIIPYFVYLVSLWYFTGIMRLPLALAGAVGCWGLCAWLLILGWNHFH >gi|289777623|gb|GG745508.1| GENE 1536 1650150 - 1650872 947 240 aa, chain + ## HITS:1 COG:STM1475 KEGG:ns NR:ns ## COG: STM1475 COG0745 # Protein_GI_number: 16764820 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 239 1 239 243 360 79.0 1e-99 MNKIVFVEDDPEVGALIAAYLGKHDMEVVVEPRGDRAEDVIAREKPDLVLLDIMLPGKDG MTLCRDLRGQWQGPIVLLTSLDSDMNHILSLEMGASDYILKTTPPAVLLARLRLHLRQHI APAGAGAGTPATLTPHKTISFGSLTIDPVNRQVLLGGENVALSTADFDLLWELATHAGQI MDRDALLKNLRGVTYDGMDRSVDVAISRLRKKLLDNATEPYRIKTVRNKGYLFAPHAWDN >gi|289777623|gb|GG745508.1| GENE 1537 1651125 - 1651487 392 120 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2838 NR:ns ## KEGG: Kvar_2838 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 120 1 120 120 244 100.0 6e-64 MMKYVVLLALSLFTSLSGWAFSLDNADIRLLCPQRGQIEVILHRYEHTQQSWGQHHFETG GGHVRQGPLLVIPFANLDQMIYHQTTGEFAYWYAKTEKLVRCRLLSLTTLYPVDIPYFRE >gi|289777623|gb|GG745508.1| GENE 1538 1651708 - 1652013 347 101 aa, chain + ## HITS:1 COG:SMa2165 KEGG:ns NR:ns ## COG: SMa2165 COG1028 # Protein_GI_number: 16263629 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Sinorhizobium meliloti # 2 89 25 112 246 60 44.0 7e-10 MRIIDEGGEVMLTGRHQQKLASLRTLLPERAWFLQNDGAKPEAAHALAESVESFGMLDGL WLNAGQLAFSTVENTTETQFDTIMANNVRSQYVVDGGLLRL >gi|289777623|gb|GG745508.1| GENE 1539 1652254 - 1653555 1737 433 aa, chain + ## HITS:1 COG:rstB KEGG:ns NR:ns ## COG: rstB COG0642 # Protein_GI_number: 16129567 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 433 1 433 433 715 79.0 0 MKKLFVQFYLLLFVCFLVMTMLVGLVYKFTAERAGRQSLDDLMKSSLYLMRSELREIPPR DWSKTLKELDLNLSFDLHIEPMSKFKLSESSMQHLRAGDIVALDDQYTFIQRIPRSHYVL SVGPVPYLYFLHEMRLLDVALMAFIAISLAFPVFIWMRPHWQDMLRIETAAQRFGEGHFS ERIHFDSMSSFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSENL TEAESQALNRDIGQLEALIEELLTYARLDRPQTELSLTTPDFPAWISDHVEDIQMVNPQR EVALATLTHGNYGALDMRLMERVLDNLVNNALRYSTQRVAVSLTLQGPRASLQVEDDGPG IAPEERERVFEPFVRLDPSRDRATGGCGLGLAIVHSIAQAMGGDVRCEASPLGGARFCFS WPVYHQLPDFTSA >gi|289777623|gb|GG745508.1| GENE 1540 1653630 - 1654562 1142 310 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2841 NR:ns ## KEGG: Kvar_2841 # Name: not_defined # Def: DNA replication terminus site-binding protein # Organism: K.variicola # Pathway: not_defined # 1 310 1 310 310 573 99.0 1e-162 MASYDLVERLNDTFRQIELELQTLQQALSSCRLLAARVFELPAVSKDAEHDPLANIPVVQ HSGKAALALALRHYSHLFIQQQSENRSSKAAVRLPGAICLQVTAAEQQDLLARIQHINAL KATFEKIVTVDSGLPPTARFEWVHRHLPGLITLSAYRTLTPLIDPSTIRFGWANKHVIKN LTRDQVLMMLEKSLQSPRAVPPWTREQWQSKLEREYQDIAALPQRARLKIKRPVKVQPIA RVWYASEQKQVQYACPSPLIALISGSQGVSVPDIGELLNYDADNVQYRYKPEAQSLRLLI PRLHLWLASE >gi|289777623|gb|GG745508.1| GENE 1541 1654552 - 1655952 1740 466 aa, chain - ## HITS:1 COG:STM1469 KEGG:ns NR:ns ## COG: STM1469 COG0114 # Protein_GI_number: 16764815 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Salmonella typhimurium LT2 # 1 463 1 463 467 786 86.0 0 MTTHRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISSEKMPGELIYALALTKRAAAKVNQ DLGLLTAEKAGAIVAAADEVLAGKHAQEFPLAIWQTGSGTQSNMNMNEVLANRASELLGG ERGMARKIHPNDDVNKSQSSNDVFPTAMHVAALIALREKMIPSLQALRATLNEKAVAFRD IVKIGRTHLQDATPLTLGQEISGWVAMLDHSLKHIEASQPHLAELALGGTAVGTGLNTHP EYAVRVAAELASLSGQPFVTAPNKFEALATVDALVHAHGALKGLAASLMKIANDVRWLAS GPRCGIGEIAIPENEPGSSIMPGKVNPTQCEALTMVCCQVMGNDVAVNIGGASGNFELNV YRPMVIHNFLQSVRLLADGMASFNEHCAVGIEPNRERISQLLNESLMLVTALNTHIGYDK AAEIAKKAHHEGLTLKASALALGYLTEAEFDSWVRPEEMVGSLATR >gi|289777623|gb|GG745508.1| GENE 1542 1656289 - 1657935 472 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 186 32 3e-45 MSNKPFVYQDPFPLKKDDTEYYLLSSDYVSVAEFAGQEVLKVDPQALTLLAQHAFHDASF MLRPAHQQQVADILNDPEASENDKYVALQFLRNSDIAAKGILPTCQDTGTAIIMGKKGQR VWTGGGDEAALAQGVYNTYIQDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYATDGDEYKF LCIAKGGGSANKTYLYQETKALITPAKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAEA TLKTVKLASTKYYDGLPTEGNEHGQAFRDVQLEQELLLEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINRDGIWIEKLESNPGKYIPEHLRQAGEGEAVK VNLNQPMSEILALLSQYPVSTRLSLSGTIIVARDIAHAKLKELIDSGEALPQYVKDHPIY YAGPAKTPDGYASGSLGPTTAGRMDSYVDLLQSHGASKIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQQSIRSLECVAYPELGMEAIWKIDVEDFPAFILVDDKGNDFFQQIQT SQCARCVK >gi|289777623|gb|GG745508.1| GENE 1543 1658137 - 1659315 1833 392 aa, chain + ## HITS:1 COG:ECs2319 KEGG:ns NR:ns ## COG: ECs2319 COG1482 # Protein_GI_number: 15831573 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 614 80.0 1e-175 MQKLINAVQNYAWGSHTALTELYGIANPDNLPMAELWMGAHPKSSSQILAADGQPRSLRE VIDADKTALLGDKVAARFGELPFLFKVLCAAQPLSIQVHPNKQASEEGFARENAAGIPLS AAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVTLLQPVASAHPAIGAFLQQPDATHL SQLFASLLNMQGEEKAKALQVLRDVLAREQGEPWQTIRLIAEFYPDDSGLFSPLLLNVVK LNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPAGE LLTQPQQHGAELDFPIPVEDFAFSLHDLSAEASDLAQASAAIIFCVDGEAVLHKGDQSLT LKPGESAFVAANESPVQVSGRGRVARVFNKLQ >gi|289777623|gb|GG745508.1| GENE 1544 1659403 - 1660983 1968 526 aa, chain + ## HITS:1 COG:STM1466 KEGG:ns NR:ns ## COG: STM1466 COG5339 # Protein_GI_number: 16764812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 500 1 502 502 650 66.0 0 MKKSLVAAGIIVALGVVWTGGAWYTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQNY QRGLFSSHLQLVVKPIAGQANSWLATGQSVVLDEVVDHGPFPLASLKTFNLAPAMASVHT TLVKNDASQALFEIAKGNTPFTVDTRIAYSGDSQSAIVLNALDYAKGDEKVTFSGGQFQL DADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD KLAISVEGKELALVDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVD NVDGQAWHQFSQQYSAQSQALLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISP LSWRNAKGESTLNLSVLLKDPAQVTTPPQTLADSLDRVVQSLDGKVVIPVDMATELMTKI AGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLE DFAAMFGLEAPAQPDAAPQEGQPQQDDAAPQQDDAAPQQDDAAPQP >gi|289777623|gb|GG745508.1| GENE 1545 1661023 - 1662051 1169 342 aa, chain - ## HITS:1 COG:ECs2328 KEGG:ns NR:ns ## COG: ECs2328 COG1609 # Protein_GI_number: 15831582 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 484 72.0 1e-136 MAIAKKITINDVAQAAGVSVSTVSLVLSGKGRISSATGERVNQAIEQLGFVRNRQAASLR GGQSGVIGLIVSDLSKPFYAELTAGLTDALERQGKMVFLTQGGRSGEKIDQRFDTLAAQG VDGVIIAGSIDRGSELRERAAQAGVPLVFASRASYLDDVDLIRPDNMQAAQLVTEHLIRR GHQRIAWLGGQSSSLTRAERVGGYCATLLKYGLPFHSEWVLECESSQKQAAEAMAGLLRQ NPTITAVLCYNNVVATGAWFGLLRAGRQSGEDGVESYFEQRVALAAFADVPEAALDDLPL TWVTTPAREMGKTLAESMLRRLEEGTGEARNQIMPPRLVTRK >gi|289777623|gb|GG745508.1| GENE 1546 1662225 - 1663817 2159 530 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 450 1 450 450 779 90.0 0 MTAKTAPKITLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVLTLLPWLDMPLLQ AIFIWMSKVGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTAKG ILPTTDAAILKANNIQNIIGIPSIDTGILGAVIAGIIVWLLHERFHNIRLPDALAFFGGT RFVPIITTVVLGLVGLAIPLVWPVFAMGINALGKMINSAGDFGPMIFGTGERLLLPFGLH HILVALIRFTEAGGTLDVCGHSVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLG GLPGAALAMYHCARPENRHKIKGLLISGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLT GLGFTIMAVLGVTIGNTDGNIIDFVVFGILHGLATKWYLVPVVAAIWFAVYYAIFRFAIT RFNLKTPGRDIDTAASVEKAVAGTIGKSGYNVPAILAALGGAENIVSLDNCITRLRLSVH DMSKVDAAALKAHRAIGVVQLNQHNLQVVIGPQVQSVKDEMAVLMNTVQA >gi|289777623|gb|GG745508.1| GENE 1547 1663870 - 1665042 1593 390 aa, chain + ## HITS:1 COG:ECs2330 KEGG:ns NR:ns ## COG: ECs2330 COG1168 # Protein_GI_number: 15831584 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli O157:H7 # 1 389 1 389 390 595 69.0 1e-170 MFDFATPIDRHGTWCTQWDYVADRFGAADLLPFTISDMDFATAPCILDAVSQRLAHGVFG YSRWQNEAFLGAIAHWYASRFNSVIDPQTVVYGPSVIYMVAETIRQWSSEGDGVVVHTPA YDAFYNTITANRREIAPVPLTLTDNQWHCDMARLESALAEPKNTLLLLCSPHNPTGKVWR REELQTMSALCQKHGVRVISDEIHMDMTWGEHRHIPWSEVAQGPWALFTSGSKSFNIPAF TGAYGFIPEANARDSYLQALKARDGLSSPSVPALVAHIAAYRDGAPWLDALRDYLQANMR YVAATLNNAFPALCWQPPEATYLAWIDLRPLNIDDHALQQALIAEQKVAIMPGYTYGPEG NGFLRLNVGCPREKLERGVEGLIAALRSLS >gi|289777623|gb|GG745508.1| GENE 1548 1665056 - 1666084 1175 342 aa, chain - ## HITS:1 COG:PA1873 KEGG:ns NR:ns ## COG: PA1873 COG0598 # Protein_GI_number: 15597070 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Pseudomonas aeruginosa # 10 341 5 339 340 291 47.0 1e-78 MSQDVTAKMLKPDFDSEVSGLVHGYLFHEQRPPQPIASGEVCARYQALADDKAFIWLHLN LNHATAEKWLTSHFPVADFFFEEIRSGSHTTRIERQGENLFAVLNDVLFRPQDTSAETAT LWLYCSPKLVVTARFKPLRFIEWMLPRLQTLRVNTSTELLAFLLEEQEEVLEQVVRQASR HVDLIEERLLSNHVQRNRADLARLRRMLLRFQRLLAPEPAAMFRLLNRPPAWMDRAVVQA FRQFTEEFSVVLNDLSGLIERISLLQEEIGARQLEQSNRTLYTLTVITVLALPINIVAGF FGMNVGGIPLASNHHGFILLVVIVAIFTLGAGYLAFRRRDDL >gi|289777623|gb|GG745508.1| GENE 1549 1666384 - 1666587 303 67 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2850 NR:ns ## KEGG: Kvar_2850 # Name: not_defined # Def: selenium-binding protein YdfZ # Organism: K.variicola # Pathway: not_defined # 1 67 1 67 67 130 100.0 1e-29 MKTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLD LIRLGFH >gi|289777623|gb|GG745508.1| GENE 1550 1666657 - 1667127 572 156 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2851 NR:ns ## KEGG: Kvar_2851 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 156 17 172 172 308 100.0 6e-83 MPSAQAGELNLYSMNTGSYVYHMTGNHGQYNEHFNNNFFSVERKFSQDSKYSVLVGTMKN SFDDRCLTLGVRRDWLKNDTGWVLKGVYAYTGEFFFDAFSHCGDSGTYRTAKKITGVGFS PYLYHGLQYNFTDYFGVEGGIIVPAIFVMSIQWSFR >gi|289777623|gb|GG745508.1| GENE 1551 1667373 - 1667726 593 117 aa, chain + ## HITS:1 COG:AGl3168 KEGG:ns NR:ns ## COG: AGl3168 COG3759 # Protein_GI_number: 15891701 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 110 21 130 137 125 69.0 3e-29 MLATLLVALVAIIHLAILVLEMFLWEAPAGRRAFNLSADFARETRVLAANQGLYNGFLAA GLAWGLWLGAPGVQVVIFFLACVLAAGIFGALTASRKILYIQALPALLALLAVVAQA >gi|289777623|gb|GG745508.1| GENE 1552 1667830 - 1669041 1375 403 aa, chain + ## HITS:1 COG:STM1965 KEGG:ns NR:ns ## COG: STM1965 COG2391 # Protein_GI_number: 16765303 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Salmonella typhimurium LT2 # 1 391 21 411 421 626 85.0 1e-179 MTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLLGVHS EQWGYYQLIHLEGTPLTRIDGRMIIGMFGGCLAAALWANNVKLRFPRSRIRIVQAVAGGI IAGFGARLAMGCNLAAFFTGIPQFSLHAWLFAIATAIGSWFGARFTLLPLFRIPVKMQKV SAASPLTQKPQQARRRFRLGMVIFFAMIGWGLLTAADHPALGLAMLFGIGFGLLIERAQI CFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMAPKIMWAGPNAAIGGLLFGF GIVLAGGCETGWIYRAVEGQVHYWWVGLGNVIGSTLLAWCWDDIAAPLATHWQKINLLNA FGPFGGLLATYLLLLIALLLVIAWERHFFRRQSTAVRTLKESA >gi|289777623|gb|GG745508.1| GENE 1553 1669038 - 1669271 353 77 aa, chain + ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 142 96.0 2e-34 MKNIIPDYRLDMVGEPCPYPAVATLEAMPSLQKGEILEVVSDCPQSINNIPLDARNHGYT VLDIQQDGPTIRYLIQK >gi|289777623|gb|GG745508.1| GENE 1554 1669439 - 1669621 73 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAEFTGEGGKIGIRANLFEKVTQPCQQFHFNPCCVVAAHGLGVCRHKPFTRLLIRILII >gi|289777623|gb|GG745508.1| GENE 1555 1669532 - 1669924 473 130 aa, chain + ## HITS:1 COG:STM1856 KEGG:ns NR:ns ## COG: STM1856 COG5562 # Protein_GI_number: 16765197 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Salmonella typhimurium LT2 # 1 130 1 130 131 140 50.0 6e-34 MELLARLGHFFEQVRADADFTTFASELRRHQVSYYIYFVSTGNMNFVMANDEVISIKSAR GLLRVRSAPSHRLTSAAVIRHFAGAINFEQYCKDLASAGVFKWIVDLEEETRHYWSKDNT LLYKESLMPP >gi|289777623|gb|GG745508.1| GENE 1556 1669963 - 1670121 315 52 aa, chain - ## HITS:1 COG:ECs3527 KEGG:ns NR:ns ## COG: ECs3527 COG0401 # Protein_GI_number: 15832781 # Func_class: S Function unknown # Function: Uncharacterized homolog of Blt101 # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 75 94.0 2e-14 MGFWRIVFTIILPPLGVLLGKGFGWAFILNIILTLLGYIPGLIHAFWVQTRD >gi|289777623|gb|GG745508.1| GENE 1557 1670404 - 1671402 1450 332 aa, chain + ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 332 1 332 333 565 85.0 1e-161 MSKLGINGFGRIGRLVLRRLLEVDSSLEVVAINDLTSPKVLAYLLKHDSNYGPFPWSVDF TEDALIVNGKTITVYAEKEAQHIPWQAAGAEVIVECTGFYTSAEKSQAHIQAGARKVLIS APAGEMKTIVYNVNDDTLTPDDTIISVASCTTNCLAPMAKVLQDAFGITVGTMTTIHAYT GTQSLVDGPRGKDLRASRAAAENVIPHTTGAAKAIGLVIPALSGKLKGHAQRVPTKTGSV TELVSVLEKKVTADEVNQAMKQAAEGNESFGYTEEEIVSSDIIGSHFGSIYDATQLEIVE AGGVQLVKTVAWYDNEYGFVTQLIRVLEKFAR >gi|289777623|gb|GG745508.1| GENE 1558 1671451 - 1672890 1673 479 aa, chain - ## HITS:1 COG:ECs2021 KEGG:ns NR:ns ## COG: ECs2021 COG1012 # Protein_GI_number: 15831275 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 479 1 479 479 837 86.0 0 MTAPVQHQMYIDGQFVSGRGDGWIDVLNPATEALLSRIPDGTAEEARLAIDASERAQPAW EALPAIERAGWLRKIAAGIRQRAEEIAGLIVAEGGKIQQLAAVEVAFTADYLDYMAEWAR RYEGEIVQSDRPGENILVFKRALGVTTGILPWNFPFFLIARKLAPALITGNTIVIKPSEF TPNNAIAFAEIVHQVGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVAAGEKIMAA AAKNITKVCLELGGKAPAIVMDDADLELAVKAVVDSRVINTGQVCNCVERVYVQQGIYDR FVNRLGEAMKAVQFGDPATRDDIAMGPLINAAARDQVAGKVAKAVAQGARVALGGQPLEG KGYFYPPTLLLDVRQEMDIIHEETFGPVLPVVAFSTLDEALAMANDSDYGLTSSIYTRDL NVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGRHGLNEYLQTQVVYLQA >gi|289777623|gb|GG745508.1| GENE 1559 1673088 - 1673888 991 266 aa, chain - ## HITS:1 COG:ECs2020 KEGG:ns NR:ns ## COG: ECs2020 COG1434 # Protein_GI_number: 15831274 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 5 265 6 265 266 290 54.0 3e-78 MAEQFPRLSAATLAAVNQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAE REVPLLISGGVGHSTNYLYEAVRQDTRYRMLPVVGRPEAHILADIAHDYWHIPRSRLVVE DQSTNCGENARFTRTTLENGGIPHRRGIVIQDPTMQRRTMATFARVWQGVATPPQWLSFP GCSPVLEQTDGQLGFAGGGAGLWPVARYLALLLGELPRLQDTPEGYGPRGKDFISHVTFP PEIIDAWRQLREDAQLAGALQARTLS >gi|289777623|gb|GG745508.1| GENE 1560 1674269 - 1675594 1821 441 aa, chain + ## HITS:1 COG:Cgl2854 KEGG:ns NR:ns ## COG: Cgl2854 COG0477 # Protein_GI_number: 19554104 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 7 427 8 428 433 418 55.0 1e-116 MSNPQDNTASILQKNKKVLIASLTGSAIEWFDYFLYGTAAALVFNKIFFPMVDPVIGLIL SWLSFSLTFFIRPIGGVIFAHIGDRIGRKKTLVLTLSLMGSATVAIGLLPTYEMVGLWAP ALLITLRIIQGMGIGGEWGGALLLAYEYAPEKRKGFFGSIPQAGVTIGMLMATFIVSLMT LFDETQFLAWGWRIPFLLSSVLVFLGLWIRKDIDETPAFKQVKKSGQVAKAPLRETLKHH WREVLIAAGLKVVETAPFYIFSTFVVSYATTTLSYQKSQALESVTLGALVATVMIPLMGL LSDKVGRQKMYTLSVVLLGLFIVPWFLLLDTGTNWGIMLATVVAFGILWAPVTAVLGTLC SEIFSANVRYTGITLGYQLGAALAGGTAPLIATGLLAKYDGDWRPVAVYLGVTVVISLLA IFCASRMKSAPGAAPSRAESA >gi|289777623|gb|GG745508.1| GENE 1561 1675805 - 1677235 2057 476 aa, chain - ## HITS:1 COG:YPO1859 KEGG:ns NR:ns ## COG: YPO1859 COG1113 # Protein_GI_number: 16122110 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 15 469 17 470 474 464 54.0 1e-130 MTEHQHQASPAAGGEGASQLKRGLGARHIQMIALGGAIGTGLFMGAGRNIAVAGTSILVI YVLVGFFTYMVMRAMGELLLTRHDYRSFADFVGEYLGPQASFYLGWTYWLSWVVTCIADV VVCGSYMQYWFPELSAWMPALSMLAILFLLNLLSVKMFGEAEFWFALIKVITIIALIGTG GWMIATGWTSPDGVTASLSHLTDPTAFMPHGITGFFAGFQIAIFSFTGIELLGTMTAETR DPQRILPKAINALPLRIIIFYLLSMVVIIAVASWPGVSAETSPFVTLFAKAGLPAAAAVI NFVALTSAMSSANSGVFSSTRMLYGLSVEKHAHWQFRILSRNTRIPVRSLLFSCFCMLIG TLLLFLVPNVMTLFTIVSTLAAIMVVFSWGMILVAYLVYRRQRPDLHAGSIFKMPAGVVM SWVSLLFFAFAIFIMIFDPDTLLALLASPLWFIALWGFWKLKQRREGQLTLDNQSA >gi|289777623|gb|GG745508.1| GENE 1562 1677245 - 1678240 1144 331 aa, chain - ## HITS:1 COG:YPO1966 KEGG:ns NR:ns ## COG: YPO1966 COG2988 # Protein_GI_number: 16122212 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Yersinia pestis # 25 320 27 319 330 266 45.0 4e-71 MEHLVNDLLHCRLQEWSFPAGIEARWLGEGILQLLPTAPWRQATILSAGVHGNETAPTEL LLQLTHDLSQGRQPLTQALLIVFGNLPAIRAARRYLHNDLNRLFGGRHLAVTPGNESRRA FALEQAVQAFYRAADAAGPVNRSHLDMHTAIRGSLYRQFALLPAHAGDFSPGFYQLLQAS GMDAIVRHTEAGGTFTHFTCEKFAAQSATLELGKVMPFGANDLSLFAATDAAIRAWISDA PLPPRDKAPVDYFLVEESIIKREGEFTLNLAANVENFTALPAGYEIARQAEKRWVVQARA PYILFPNAGVATGQRAGLLLRAAALRLPQPA >gi|289777623|gb|GG745508.1| GENE 1563 1678251 - 1679591 1670 446 aa, chain - ## HITS:1 COG:YPO1965 KEGG:ns NR:ns ## COG: YPO1965 COG3724 # Protein_GI_number: 16122211 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Yersinia pestis # 1 446 1 446 447 531 63.0 1e-150 MSGFEANFDGLVGPTHHYAGLSVGNEASQNNRDGLSNPKKAALQGLYKMKALADRGFVQG ILPPQPRPNLRLLREVGFQGSDEQVIRQAAHAAPQLLSAFSSASSMWTANAATVSPSADS ADGKVHFTVANLNNKLHRMQEAPTTSAILGATFADPRYFAHHAALPQHGDLGDEGAANHN RFCREYDRQGVQFFVYGRRASGGIAPVKYPARQTLEASEAVARLHQLDPRYTVFAQQAPQ AIDRGVFHNDVIAVSNRHVLFHHQQAFVDQATVLATLRAKSDSLDIPFTSVEVPDERVSL DDAVASYLFNSQLLSKPDGKMLIVVPEECRQRENVWRYLSDLAADSASPIDEVAVFDLRE SMRNGGGPACLRLRVVLNEAERQAVNAHSLMNDERYQQLTAWVEKHYRDRLHARDLADPQ LLREVYQALDELTQILRLGAVYDFQR >gi|289777623|gb|GG745508.1| GENE 1564 1679613 - 1681079 1743 488 aa, chain - ## HITS:1 COG:YPO1964 KEGG:ns NR:ns ## COG: YPO1964 COG1012 # Protein_GI_number: 16122210 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Yersinia pestis # 5 488 16 500 505 609 66.0 1e-174 MAVKAQFIAGQWQAGSGATMSKLAPEDQSLLWQAASAGADDVQAACAAARAAFYPWSHRP LAERIAVVERFAALLETHKEALATLISRETSKPLWETCTEVQAMIGKAAISIEAYHQRTG FHESTLPDGKAQLRHKPHGVMAVFGPYNFPGHLPNGHIIPALIAGNTIVFKPSELTPATA EMTVQLWQQAGVPDGVINLLQGGKATGQALLENRDVDGVLFTGSAAAGFHFHRYFGGQPE KMLALEMGGNNALIVADVADVDAALHVIIQSAFISAGQRCTCARRLIVPRGEQGDALLQR LVAASAQIRAGKWDDQPAPFMGGVISLDAAQNMLAAQQKLEGLGGKVLLRMRQPDPRSTV LTPGIVDVTGIEVPDEEYFGPLLTVIRYDDFPEAIRLANQTRYGLAVGLISSDAAQFEQL ADEARAGIVNWNKPLTGASSKAPFGGVGASGNHRAAAWYAADYCAWPMASQVSDTLTLPA TVSPGLPF >gi|289777623|gb|GG745508.1| GENE 1565 1681070 - 1682092 1384 340 aa, chain - ## HITS:1 COG:YPO1963 KEGG:ns NR:ns ## COG: YPO1963 COG3138 # Protein_GI_number: 16122209 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Yersinia pestis # 1 337 2 350 350 369 55.0 1e-102 MLFRPVRENDLDDIVRLAARAGVGMTSLPHDVERLAARIRRSIETFAGELPRGQQGFLFV LEDTALARVVGVSAIEVAVGLDEPFYNFRIQKTVRASKALGVYKPQELLNLSYDHTGHSE LCTLFLDPAYQRNRNGLLLSKARFLFIAAFREWFSPHLFAELRGCSDEQGQSPFWDALGH HFFDIPFADADRLTGTGMKTFIAELMPAYPIYISLLPEAAREVIGQVHPNTAPARAILEK EGFSWRGSVDIFDAGPVLEANTDQIRAVRDSQCLPAQQLMGALPAPTLVANGQFDNFRAL LVAHEEQVSLDAAALDALQVSETDRVYTVTLNPEENRSWR >gi|289777623|gb|GG745508.1| GENE 1566 1682111 - 1683316 1573 401 aa, chain - ## HITS:1 COG:cstC KEGG:ns NR:ns ## COG: cstC COG4992 # Protein_GI_number: 16129702 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 395 1 396 406 511 63.0 1e-145 MSGTMTREDFDAYLVPCFAPAPFIPVRAAGSRVWDQQGKEYIDMAGGIAVNALGHAHPAL AQALQDQLAKLWHIGNGYTNEPVLQLAKTLVQSTFADKVFFCNSGAEANEAALKLARKYA HDKFGGEKSEIIAFNHAFHGRTLFTVSVGGQPKYSSDYAPLPQGITHLPYNDIEAVTAAI SSRTCAVIVEPIIGEGGVIPADPAFLQALRTLCDRHHATLIFDEVQTGAGRTGHLYAYQH YNVVPDILTSAKGLGGGFPIGAMLAKEAWAQVFQPGTHGTTFGGNPLAATVANAVLAHLD APLLAGVGERHALIVDQLNAISARYDAFSAVRGTGLLIGAELAGPLRGKAKTLTNLAAEE GLIALIAGPDVLRFAPALNIPLADIAEAFVRLDRAVARLTR >gi|289777623|gb|GG745508.1| GENE 1567 1683845 - 1685119 1819 424 aa, chain + ## HITS:1 COG:STM1795 KEGG:ns NR:ns ## COG: STM1795 COG0334 # Protein_GI_number: 16765136 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 424 18 441 441 762 87.0 0 MEKLSYASESSTSPWTTYLRQIDRVAPYLGDLAYWVETLRHPKRALIVDIPVQMDDGTIR HFEGYRVQHNLSRGPGKGGVRYHPDVDLNEVMALSAWMTIKCAAVNIPYGGAKGGIRVDP FSLSEGELERLTRRYTSEIGIIIGPQKDIPAPDVGTNGKVMAWMMDTYSMNHGTTITGVV TGKPIHLGGSLGREKATGRGVFVTGREVARRAGIEIEGAKVALQGFGNVGSEAARLFAGV GARVVVIQDHTATLYNEGGIDMAALTAWQAEKKQIAGFPGAQEIDKDAFWTTPMDILIPA ALEGQITRERAEKLTCKLVLEGANGPTYPEADDVLAERGVIVVPDVICNAGGVTVSYFEW VQDMASFFWSEEEINAKMDRIMTDAIIHVCDKAAEKACTLRTAAYIVACERILMARKDRG IYPG >gi|289777623|gb|GG745508.1| GENE 1568 1685184 - 1685837 641 217 aa, chain - ## HITS:1 COG:MT3761 KEGG:ns NR:ns ## COG: MT3761 COG0560 # Protein_GI_number: 15843274 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 2 212 26 239 287 98 33.0 7e-21 MSIAFFDVDETLITGKSMFLFLHRYAEEYPLQCGLTAAAIVRQLQALSKAGQPREAINRY YYSLFRHEPRAQVRAVAEALYREGGYGFHREVVAILRQHQARGDDVVFVSGSMTDILWPA MAALGVEHALCSEPVVVDEHYTGELWRTAIGEHKALHAQRYAQERGQPLAACYAFGDHIS DLPLLALVGNPCAVNPCAALLAESQRRGWPVLWSNGG >gi|289777623|gb|GG745508.1| GENE 1569 1685818 - 1686603 869 261 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2869 NR:ns ## KEGG: Kvar_2869 # Name: not_defined # Def: A-factor biosynthesis repeat-containing protein # Organism: K.variicola # Pathway: not_defined # 1 261 1 261 261 518 99.0 1e-146 MEKLIVVGEKFTDFARRHQNVLTVNEFERFVWSGELAGVDKIVIGQGVQLDDISRTVCII RQHYPDKIRQIVNLQDLYYQNNRDHQRLVHKRKKENILITSPEKRDEDSYCARLILQDAS ELLCDHQTGQHIQGMVLIEAARQTIIATSEKFLLAEAGVAMDEKYFTLSSLQVAFSSFVF PLPVTIVLNVVSCKSSAHGRFTCECSVGFDQTGTRKAEVGFSFSVYDLNYITRKECEQAA LCHQHYLVSIEQGDGDEHRLF >gi|289777623|gb|GG745508.1| GENE 1570 1686617 - 1687822 1251 401 aa, chain - ## HITS:1 COG:FN0495 KEGG:ns NR:ns ## COG: FN0495 COG0183 # Protein_GI_number: 19703830 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Fusobacterium nucleatum # 1 401 1 401 402 396 53.0 1e-110 MNKVYIVAACRTPVGRFLGALKTVSAVELAALTVRHNLQQAGIDPAWIDEVICGCVLAAG QGMGPARQVALRAGIPVQKPAYTLNMICGSGMKSITEGAIHIQSGYADMVVAGGMENMSQ APFLLRGEIRGGVKFGAFSSEDLIQSDGLTDPLLHIPMGETAEAIAAHEQISRAEQDQYA LDSHQKASAASRAGHFAEEIVPVTVSGKRGVSVVREDEQIRHDLSADQLAALKPAFRRDG SVTAGNASGLNDGAASVILASARAVAQYGLRPLAEIVAFGEGGVDPAMMGLGPLPAMTCA LRRGRFQLSDMARLEINEAFAAQVLGVVKGLAREHQMTAEEIAARLNVNGGAIALGHPLG SSGTRIVVSLLHALRRENKPTGLASLCIGGGMGIALIVKTI >gi|289777623|gb|GG745508.1| GENE 1571 1687825 - 1689309 1433 494 aa, chain - ## HITS:1 COG:BS_yhjG KEGG:ns NR:ns ## COG: BS_yhjG COG0654 # Protein_GI_number: 16078114 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Bacillus subtilis # 3 476 6 472 499 158 28.0 3e-38 MKKVLIVGAGPVGLIIGCYLNKYGIDFDIIDKNTHSTTWSKALSVSPATIKAFHGLALAG ELTAQGKQVQSIYAWYKNRKFLHIDNRHLPTCYPFHVSIPQPRTEKILETALAEAGQLVK RGHQLVSWRREEGRYHVSLLDDARRACSATYDYIIGADGAASTVRELAGIGFSGHDYPLH FVMADVQFASAATLPGTSYYIDELGFLIFLPMPDNQVRIVIKRAGRLPSPRPVPDLQEIN VALARFCPEVPPAQALTWSSSANFYNRIADDNLQHNIMLAGDAFHLFSPIGGQGMNTGIQ DAINLAWKLAFYLHGVASDRLLASYRTERFAAVSGVLHATDHDTGLIAGLVPKNHIDAVY FPEFCNRHYYRHQLPLQYAGFAAPQCAHPNGLMGHHVPWYVFTSPQATFRNSYDAFASGK VVVFSARVDCPPLSRLKPGGWFIFCALDPADEAFLEALQIGRDDYAVINPDGYVGFTGGE AGTSQYLSSLYVME >gi|289777623|gb|GG745508.1| GENE 1572 1689371 - 1690435 1409 354 aa, chain - ## HITS:1 COG:AGl29 KEGG:ns NR:ns ## COG: AGl29 COG0667 # Protein_GI_number: 15890114 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 346 1 338 353 315 46.0 1e-85 MKYRYLGSTGLSVSELCFGAMTFGEKGAFLGAPGRNWSEFGVVPEHTAYDLVYKALDAGI NFFDTADCYKNGQGEELLGNALKGKRQQVIIGTKGRWQTDPNPNALGASRYHIINAVDAS LQRLKTDYIDIYHLHGFDPRTALEDTLRTLDALIRAGKIRYIGVSNYAAWQLAKALGISE RLGLEKFCVYQGYYNIAARELEHEIIPLSVDQNVGITVWSPLAGGFLTGKYPRNQAFPEG SRLANATPFESAPIANREQAWQTLEVMQEIARQRNASVAQVALNWLRTRPGITSLVIGAT KLAQLEDNLAALNWTLSDEEAAILNSVSEKEKPYPYWHICNVAGDRRLADDIYP >gi|289777623|gb|GG745508.1| GENE 1573 1690432 - 1691619 1239 395 aa, chain - ## HITS:1 COG:mlr4084 KEGG:ns NR:ns ## COG: mlr4084 COG2814 # Protein_GI_number: 13473472 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Mesorhizobium loti # 11 368 1 358 397 276 49.0 5e-74 MTIAVSRSAGLPAAVYALSVGSFGIGTTEFVIMGLLLDVAHDFHISITLAAWSITAYACG VVIGAPLLTPLLSRYPKKPALLFLMILFSIGNLGCGIAGNMTMLIIFRVITALAHASFFG ISSVYAAELAPVDKRASAVSAVFLGATLANILGVPLGAWVGQYLGWRYTFFMVTLIGILS ALAVIALVPGRQAQPAVQSRIRDELKVLRHPTVLRSLLITALGFSGVFAAFTYIAPMLKT VTGMSEHLIPPVLVLFGVGMVAGNHLGGRLTDGGVRRALLLTLALLIVVLCLFPFAIQTL PGACAAVFLLGAAMFSTIPPLQMQALDSSETGKSMVSSCNIAAFNLGNAAGAWFGGLLLT AGVSLSHIPLAGACLTASGFVIASVTLSPLKGSQA >gi|289777623|gb|GG745508.1| GENE 1574 1691669 - 1692667 1348 332 aa, chain - ## HITS:1 COG:mlr5051 KEGG:ns NR:ns ## COG: mlr5051 COG0667 # Protein_GI_number: 13474214 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 1 324 2 324 332 397 60.0 1e-110 MKTRYLGKEKFQVSALGLGCMGMSFAYGGAEESQAINTIHAAVDMGVTFLDSAEVYGPFD NEVLVGKAIKGIRDKVQIATKFGFRILPTGQGLERMAGVDSRPEHIRESVEGSLKRLNIE TIDLLYQHRVDPAVPVEDVVGTMADLVKEGKIRHIGLSEVSAQTLRRACKVHPITAVQTE YSLWTREPEAGILNACRELGVGFVPYSPLGRGFLTGKITDPGVFAEDDFRRNLPRFQAET MRKNQLLLERLQQVATRYDATLAQIALAWVMSKGEDIVPIPGARKIAHLRDNAGAANITL SPEDILTIEDIFTPDNVTGLRYNQGDFNLIEK >gi|289777623|gb|GG745508.1| GENE 1575 1692981 - 1693682 900 233 aa, chain + ## HITS:1 COG:PA1738 KEGG:ns NR:ns ## COG: PA1738 COG0583 # Protein_GI_number: 15596935 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 220 71 290 304 160 40.0 1e-39 MTPVVNDYRRVVDSLNYHRLTPEGVVKVNLPRIVLDLFFQHYFIAFKTAYPDVTLELYTT DRKVNIIESGFDAGIRYSQDVPKDMIAIPFGEKLSLIPVASPAYIREAGEPDTPQSLVNF RCINRCFPSGEKYRWEFISPSGEPSEVSVRGDLVVDSDTAMIQAAESGLGIAFVYQSLVT QQLSAGSLVRLLPDYHYPADHFCVYYPSRKHIPVPLRAFITWVMAQNKSILSE >gi|289777623|gb|GG745508.1| GENE 1576 1693820 - 1694251 716 143 aa, chain + ## HITS:1 COG:PA3341 KEGG:ns NR:ns ## COG: PA3341 COG1846 # Protein_GI_number: 15598537 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 8 143 9 144 144 85 37.0 4e-17 MDNRQLNFSHLLYLTAHHWRLAVNRRLKDLGLSQASWVAVAAIARQPQPLSQSELAQELG VESPTIVPLINRLVALGLVERVTTASDKRKRLLVATEQGMALYEQVKTVADDLREEILTA ITPQEREQTQRVLEKLLREVEKK >gi|289777623|gb|GG745508.1| GENE 1577 1694251 - 1695903 2267 550 aa, chain + ## HITS:1 COG:SMc00563 KEGG:ns NR:ns ## COG: SMc00563 COG0477 # Protein_GI_number: 15964886 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 45 512 24 493 531 323 42.0 4e-88 MPRRQDNPYAPHDWAPHEKPALLGSPSTPLHSPQKRLAYGVVGLLVCLTGALGNAVVTAN LQLLQGTFAAWSTEIAWLPAVYVMTNVSINLLLVKFRQQFGLRAFTEGFLVLYVLVTFFH LFVNDLSSAMMVRAAHGMVAAALSSLGIYYQVQAWPARHRLKGLTIGITGSSLAIPLARL FSTELLQIDEWRGLYFFELGLALVSLACVIALKLPPSDRKKVFEKKDFITFFLLAPGMAL VCAVLSLGRLEWWFEAPWIGWSLAAAVVLIVAAIAFEHNRSNPLLNTKWLSSGSIVRLGL IMLLIRIVLAEQNTGVIGWLQYVGLQNEQMTNLAWSIFAGILCGIIASCLTLNPQKLYWP TATALALIMVASLLDSQSNALTRPEQLMFSQFLLGFGSAFFLAPAMLAGIGGVFADPRNL VSFSVLFGMSQNIGGLLGSAILGTFQTWREKFHSSQLADQITTLNPLIVERLQQYSQMYQ SQIGDSTLLNVQATTLLQNAATLQANILAWNDTYLLTAAISAGTLVWVFWRLIRLRLTAR IALKRATGSK >gi|289777623|gb|GG745508.1| GENE 1578 1695932 - 1697017 1356 361 aa, chain + ## HITS:1 COG:BMEII0793 KEGG:ns NR:ns ## COG: BMEII0793 COG1566 # Protein_GI_number: 17989138 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Brucella melitensis # 37 355 1 319 325 290 51.0 2e-78 MSQQDAAKQQANTRNNIRVVSIFTAAAIGLVGVLVILYAWQLPPFTRHSQFTDNAYVRGQ TTFISPQVNGYITAVNVKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALRNNLQ QRKSAEATIAKNEAALQNARAQNLKIQADLKRVQELTADGSLSIRERDSARASAAQGAAD IEQAKAALEMSRQDRESTIVNRDSLEADVASAKAALELAQIDLQNTQIIAPTGGQLGQIS VRLGAYVSAGTHLTSLVPPQHWVIANLKETQLAEVRIGQPVTFTVDALNGERFHGKVQSI SPATGVEFSAISPDNATGNFVKIAQRIPVRITVNDGQKYSEHLRPGMSVQVTIDTRAEKQ P >gi|289777623|gb|GG745508.1| GENE 1579 1697014 - 1698384 485 456 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 42 453 39 456 460 191 29 1e-46 MIRPVTLAVILALVGCQSADVQRAQPTLTIPAAWRADVGPASPVEGVWWRNFHDSTLNQY VDRALRYNSDVLIARERVNEYQARAYAADSSLFPSLDASLSGTRARAQSAATGLPIHSTL YKGGLTASYDVDIWGANRSAASAAGASLEAQKAAAAAANLSVASSVAVGYVTLLSLDEQL RVTQQTLKSREDAWRLAKRQFETGYTSRLELMQADSELRSTRAQIPPLQHQIAQQENALS VLLGDNPGAVKRGEFAQLTPLRLPSQLPSTLLNRRPDIVQAQRQLVAADATLASSQAQLL PSINLTATGSLQDRTLPELLDNPLRLWSVGGSILAPLLNRQALNAQVDVSMAQRNQALYS YEKTVRGAFKEVNDSLDAISRYGEQLAELQGQVAVAEETLRIAQNRYRNGYSSYLDVLDA QRTLFSTQLSVVQVKNNLLLAQIDLYRALGGGWMNA >gi|289777623|gb|GG745508.1| GENE 1580 1698488 - 1699147 702 219 aa, chain + ## HITS:1 COG:BH1828 KEGG:ns NR:ns ## COG: BH1828 COG4122 # Protein_GI_number: 15614391 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Bacillus halodurans # 2 217 4 221 223 241 53.0 7e-64 MQQQWSAVDNFMISSLIPEDDVLSQVLENNKRAGLPEHDVAANQGQLLALLVRITQARRI LEIGTLGAYSAIWMARALPADGKLITLEADPGHAGVARQNIRLAGLNERIELIEGPALNT LENFANVQPFDLIFIDADKPNNPRYLEWALHYSRPGTLIVGDNVVRDGEVINGQSDDARV QGVRRFIEMIGDNPRLTATALQTVGIKGWDGFTLALVNG >gi|289777623|gb|GG745508.1| GENE 1581 1699248 - 1700048 292 266 aa, chain - ## HITS:1 COG:no KEGG:KPK_2983 NR:ns ## KEGG: KPK_2983 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 266 18 283 283 534 98.0 1e-150 MMAMYRLFMLVSAILVITACKPFVDAFSCDETQRAINDANFYILTYLPPLNGDVQSVKID GSQNNDAGTLRFARCRRLESYERAKTFNTANDSTIVRDNVHWRNDKGWMREYIRQTRSAA GNIRKMVMREQFYTDNLGRIVRSENLLVSQQPPKAMSTTTYHYDDRHRLVRKTVNGGMMA MLAVNYRYAEGHLSRIADSDATTTLRWDEKGRWLSEERTTTYSTKHQSRCLGWDPEGNCT GEYGEHEGYGGKSDASLHYQYTYYPQ >gi|289777623|gb|GG745508.1| GENE 1582 1700290 - 1704192 5069 1300 aa, chain - ## HITS:1 COG:STM1641 KEGG:ns NR:ns ## COG: STM1641 COG1643 # Protein_GI_number: 16764985 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Salmonella typhimurium LT2 # 1 1299 1 1299 1300 2436 92.0 0 MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMAQEISQAAGK VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG LKGLIGHTQPRRLAARTVANRIAEELQTEPGSCIGYKVRFSDHVSDNTMVKLMTDGILLA EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH FNHAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ ATAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE KVTVYGLPIVGARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEIEELE HKSRRRDILVDDETLFEFYDQRISHDVISARHFDAWWKQASRETPDLLNFEKSMLIKEGA EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRKMTGVTIDREAW QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFNQLHDK VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKIESVQQAWQQWLNKLPPNRREDDD VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP >gi|289777623|gb|GG745508.1| GENE 1583 1704396 - 1705001 999 201 aa, chain + ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 360 92.0 1e-100 MSKVLVLKSSILAGYSQSGQLSDYFVEQWQEKHPGDEITVRDLAANPIPVLDGELVGALR PSDAPLTPRQQEALALSDELIAELKGNDVIVIAAPMYNFNIPTQLKNYFDLVARAGVTFR YTEKGPEGLVTGKRAVVVTSRGGIHKDTPTDLVTPYLSTFLGFIGITDVNFVFAEGIAYG PEVAAKAQSDAKAAIDSVVAA >gi|289777623|gb|GG745508.1| GENE 1584 1705244 - 1705576 278 110 aa, chain + ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 7 109 5 108 110 78 40.0 2e-15 MCHAIEFIETSLFTRQIKQLASDEDLRALQRQLIGNPDFGDLIQDTGGLRKIRMATGSQG KSGGVRVIYFLATREIIYLVLAYPKHTKESLSAAEKNELRKLTRRLKNEV >gi|289777623|gb|GG745508.1| GENE 1585 1705578 - 1705862 287 94 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2885 NR:ns ## KEGG: Kvar_2885 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 94 1 94 94 159 100.0 3e-38 MGYFNELKASLEEAVEIKDGNKAPARATRYEVADVKAIRTQLNVSQAEMAKALGTSVDTI KSWESRRRNPTGLAAKVLAVIQANPAFFRELAEH >gi|289777623|gb|GG745508.1| GENE 1586 1705895 - 1706491 803 198 aa, chain - ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 195 1 195 196 356 90.0 2e-98 MPIYQIDGLTPVVPEESYVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD NCVMHGFPGQDTVVEEDGHIGHGAILHGCVIGRNALVGMSAVIIDGAVIGENSIVGASAF VKANAEMPANHLIIGSPAKAIRTLSEQELAWKKQGTREYQVLVERCKQTLHQVEPLREVE AGRKRLEFDENLRPKTQR >gi|289777623|gb|GG745508.1| GENE 1587 1706501 - 1707427 1176 308 aa, chain - ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 1 305 1 304 316 512 84.0 1e-145 MSKLDAFIQQAVTAMPISGTSLIASLYGDALLQRGGEVWLGSVAALLEGLGFGERFVRTA LFRLNKEEWLDVIRIGRRSFYRLSDKGLRLTRRAEHKIYRASAPEWDGTWLLLLSEGLEK NVLADVKKQLLWQGFGALAPSLLASPSQKLADVQSLLHEAGVAENVICFEAHSPLALSRA ALRSRVEECWHLTEQNEMYESFISLFRPLLPLLRDCDPAELTPERCFQIQLLLIHFYRRV VLKDPLLPEELLPAHWAGQTARQLCINIYQRVNPGALAFVSEKGESSVGELPAPGPLYYQ RFGGLPGA >gi|289777623|gb|GG745508.1| GENE 1588 1707527 - 1708843 1650 438 aa, chain - ## HITS:1 COG:paaK KEGG:ns NR:ns ## COG: paaK COG1541 # Protein_GI_number: 16129359 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Escherichia coli K12 # 1 435 1 435 437 860 93.0 0 MITTTKLDPIETASRDELQALQTQRLKWTLKHAYDNVPMYRRKFDAAGVHPDDFRELNDL QKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARS LRAAGGTAKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDM IMVTPSYCLNLIEELERQMGGDARGCSLRVGVFGAEPWTLAMRAEIERRLGITALDIYGL SEVMGPGVAMECLETVDGPTIWEDHFFPEIVNPDDGTPLEDGEHGELLFTTLTKEALPVI RYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEILKFEHLAPHYQL EVNRRGHLDSLAVRVELKESGLALSHEQRCQICHQLRHRIKSMVGISTDITIVNCGSIPR SEGKACRVFDLRKAVVSG >gi|289777623|gb|GG745508.1| GENE 1589 1708870 - 1710075 1430 401 aa, chain - ## HITS:1 COG:paaJ KEGG:ns NR:ns ## COG: paaJ COG0183 # Protein_GI_number: 16129358 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 401 1 401 401 629 84.0 1e-180 MRDAFICDGIRTPIGRYGGALAGVRADDLAAIPLRELLSRNPGLDPAAIDDVIFGCANQA GEDNRNVAHMATLLAGYPHSVPGTTINRLCGSGLDAIGFAARAIKAGDADLLIAGGVESM SRAPFVMGKASTPYQRQSELFDTTIGWRFVNPLMAQHFGTDSMPETAENVAELLNISRAD QDAFAWRSQQRTEQAQRDGILAQEIVPVQIIGKKGAVSAVRDDEHPRPETTLEQLAKLKA PFRQGGVITAGNASGVNDGAAALIIASEQQAAIQGLTPRARIVAMATAGVEPRLMGLGPV PAVRKVLERAGLNINDMDLIELNEAFAAQALGVLRQLGVPDDAAHVNPNGGAIALGHPLG MSGARLALSASLELQRRGGRYALCTMCIGVGQGIAMILERV >gi|289777623|gb|GG745508.1| GENE 1590 1710075 - 1710497 409 140 aa, chain - ## HITS:1 COG:paaI KEGG:ns NR:ns ## COG: paaI COG2050 # Protein_GI_number: 16129357 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 139 1 139 140 213 76.0 8e-56 MSNDPWRNARVMYEKDTCARKMGIELIEMDDGFAQMSMTVSADMLNGHQTCHGGQLFTLA DTAFAYACNSQGLAAVASAANIDFLRPAFAGDRLVATARVKQQGKLTGVYDIEIVNQQQK IVALFRGKSHRIGGTITGDV >gi|289777623|gb|GG745508.1| GENE 1591 1710487 - 1711908 1308 473 aa, chain - ## HITS:1 COG:ydbU KEGG:ns NR:ns ## COG: ydbU COG1250 # Protein_GI_number: 16129356 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 1 472 1 474 475 672 72.0 0 MTTSLATVAVIGSGTMGAGIAEVAAAAGHPVLIYDIDHQAIARAIDGIARRLASRVERGK LASEQADALLARLHPAHDLAALADADLVIEAASERLEVKTALFAQLAAICAPSTLLTSNT SSISITAIAAGVKNPERVAGLHFFNPAPVMKLVEVVSGLETSAEVVEQLCQCVSGWGKQP VRCRSTPGFIVNRVARPFYAEAWRALEEQVAAPEVIDAALRDGGGFPMGPLALTDLIGQD VNFAVTCSVFNAFWQDRRYLPSLLQQELALAGRLGKKSGHGVYRWPAETQPDAALPPVSI GAQSITAISDSVTELDELLLLETEGETALALSVKHHRPVVVYDLCASDTVVLAAAATNAP AVTDKAVHYFQQQGKKVLRIADYPGLLVWRTVAMLINEALDALQKGIASPQDIDTAMRLG VNYPHGPLAWGERLGWRRVLQLLENLQHHYGEERYRPSSLLRQKALMEKHHEQ >gi|289777623|gb|GG745508.1| GENE 1592 1711912 - 1712700 930 262 aa, chain - ## HITS:1 COG:paaG KEGG:ns NR:ns ## COG: paaG COG1024 # Protein_GI_number: 16129355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 262 1 262 262 420 84.0 1e-117 MEAFILSAVEQGVMTITLNRPDRLNSFNDLMHHQLAECLKQAERDDGVRCLLITGAGRGF CAGQDLNDRNVDPSGPPPDLGMSVERFYNPLVRRLAALPKPVICAVNGVAAGAGATLALG CDIVLAARSAKFVMAFSKLGLVPDCGGSWFLPRVAGRARAMGLALLGDSLSAEQAAQWGM IWQLVDDSELADTSLQLARHLAAQPTFGLGLIKKALLASETNSLDAQLDLERDYQRLAGR SDDYREGVSAFLAKRPPQFSGK >gi|289777623|gb|GG745508.1| GENE 1593 1712703 - 1713470 934 255 aa, chain - ## HITS:1 COG:ydbS KEGG:ns NR:ns ## COG: ydbS COG1024 # Protein_GI_number: 16129354 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 255 1 255 255 372 79.0 1e-103 MSDLLIHRHGRVLQLTLNRPQARNALNNALLTQIAEALEVAATDDSVGVCVISGNPRFFA AGADLNEMAEKDLPATLDDIRPRLWARIDAFTKPLIASVNGYALGAGCELALLCDLIIAG DNARFGLPEITLGIMPGAGGTQRLIRSVGKALASRMVLSGESIDARQAQQAGLVSDIHPA ALTDEYALKLATTIARHSPLALRAAKQSLRLSQEVSLQAGLQQERQLFSLLSATEDRREG IDAFLQKRTPDFKGR >gi|289777623|gb|GG745508.1| GENE 1594 1713467 - 1714537 1158 356 aa, chain - ## HITS:1 COG:paaE KEGG:ns NR:ns ## COG: paaE COG1018 # Protein_GI_number: 16129353 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 356 1 356 356 562 77.0 1e-160 MTTFHSLKVARVEPETRDAVTITFAIPQALQAEYCFRPGQHLTLKARLGGEELRRCYSIC RSRTPGEISVAVKAIDGGRFSRYAQHDIQQGMELEVMVPQGHFGYQPQAERQGEYLAIAA GSGITPMMAIMSATLATEPQSRFTLIYGNRSSHSMMFRQALADLKDRYPQRLQVIHLFSQ ESMDSDLLQGRIDGDKLRQLADHLLDFSRFDEAFICGPAAMMDEAEAALRELGVAEKSIH LERFNTPGGNVKRAAGVQAEGRTVTIRQDGRDRLIALSAEDDSILDAALRQGADLPFACK GGVCATCKCKVLRGEVAMAANYSLEADELAAGYVLSCQSLPTSGDVVVDFDARGMA >gi|289777623|gb|GG745508.1| GENE 1595 1714545 - 1715042 583 165 aa, chain - ## HITS:1 COG:paaD KEGG:ns NR:ns ## COG: paaD COG2151 # Protein_GI_number: 16129352 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Escherichia coli K12 # 1 165 3 167 167 270 77.0 7e-73 MQRLADIAPAEVRTIWGLLSAIPDPEVPVLTITDLGMVRSVARHGDGWVIGFTPTYSGCP ATEHLLGEIRAVMSEHGFLPVHIVLQLDPPWTTDWMSQEARERLRQYGISPPQGHACHAD MPAEVSCPRCGSTHTSLISEFGSTACKALYRCDSCREPFDYFKCI >gi|289777623|gb|GG745508.1| GENE 1596 1715054 - 1715809 1044 251 aa, chain - ## HITS:1 COG:ydbP KEGG:ns NR:ns ## COG: ydbP COG3396 # Protein_GI_number: 16129351 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 5 251 2 248 248 374 74.0 1e-104 MNTPNPVATYALRLGDNGLVLAQRLGAWCGHAPELEIDLALANIGLDLLGQARNFLSYAA ELNGCGDEDTLAFGRDERQYSNLLLVEQPNGNFADTIARQFFIDVWHVALYSRLVNSRDT QLAAIAAKGLKEVRYHQRFSRGWLERLGNGTELSNRKMQQAVDNLWRFTGELFLADEVEL SLVEQGIAVDPRELQAEWQSAVHTALLDSGLQIPQEAAFRSGGKQGLHSEHLGPLLAEMQ YLQRSHPGLQW >gi|289777623|gb|GG745508.1| GENE 1597 1715817 - 1716104 467 95 aa, chain - ## HITS:1 COG:ynbF KEGG:ns NR:ns ## COG: ynbF COG3460 # Protein_GI_number: 16129350 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme of phenylacetate metabolism # Organism: Escherichia coli K12 # 1 95 1 95 95 180 93.0 5e-46 MSKVYWPLYEVFVRSKQGLSHRHVGSLHAADDQMALENARDAYTRRSEGCSIWVVKASEI VASQPEERGEFFDPAESKVYRHPTFYTVPDGMEHM >gi|289777623|gb|GG745508.1| GENE 1598 1716116 - 1717045 1151 309 aa, chain - ## HITS:1 COG:ydbO KEGG:ns NR:ns ## COG: ydbO COG3396 # Protein_GI_number: 16129349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 309 1 309 309 586 92.0 1e-167 MTEEQRFDQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLR RKAILLAKVQDEAGHGLYLYSAAETLGCAREDLYQKMLDGQMKYSSIFNYPTLSWADIGV IGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGNDAQRQML QDAINRFWWPALMMFGPNDDNSPNSARSMAWKIKLHSNDELRQRFVDNTVPQVEILGMTV PDPDLQFDEASGHYRFGEIDWQEFNEVISGRGICNHERLAAKRKAWEEGEWVREAALAHA QKQQARSAA >gi|289777623|gb|GG745508.1| GENE 1599 1717332 - 1719377 2351 681 aa, chain + ## HITS:1 COG:maoC_1 KEGG:ns NR:ns ## COG: maoC_1 COG1012 # Protein_GI_number: 16129348 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 500 1 500 500 811 85.0 0 MQQLASYLSGAWQTGRGRARTIHHAITGAALWEVTSEGLDMAQARRFAIERGGKGLQAMT FIERSAMLKAVAKRLLEQKDEFYAISAQTGATRADSWVDIEGGIGTLFTYAGLGSRELPD DLLWPEDELIPLSKQGGFAARHVLTSKSGVAVHINAFNFPCWGMLEKLAPTWLAGMPAII KPATATAQLTQAMVKAIVDSGLVPEGAISLICGGAGDLLDHLDSQDVVTFTGSAATGQQL RTHPNLVAKSIPFTMEADSLNCCVLGEDVTPEQPEFALFIREVVREMTAKAGQKCTAIRR IIVPHAQIDAVREALIARLQKITVGDPAQEGIKMGALVNTEQRQDVQDNVNKLIAAGCEA LLGGQADLNADGAFFPPTLLYCPQPDETPAVHAIEAFGPVATLMPYRDRQHALTLARAGG GSLAGTLVTASGELAREFILGAARAHGRIQILNEESSAESTGHGSPLPQLVHGGPGRAGG GEELGGLRSVKHYMQRTAVQGSPTMLATIGQQWVRGAQVSEDRIHPFRKYFEEIQPGDSL LTPRRTLTEADIVNFACLSGDHFYAHMDKIAAAESIFGERVVHGYFLISAAAGLFVDAGV GPVIANYGMENLRFIEPVKPGDTIQVRLTCKRKTVKRQRSADEKATGVVEWAVEIFNQHQ QAVALYSILTLVARQQGDFPA >gi|289777623|gb|GG745508.1| GENE 1600 1720394 - 1722661 3028 755 aa, chain + ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 7 755 7 755 757 1320 84.0 0 MANGLKFSPRKTALALAVAVVCAWQSPVFAHGSEAHMVPLDKTLQAFGADVQWDDYAQMF TLIKDGAYVKVKPGAKTAIVNGKTLDLQVPVVMKEGKAWVSDTFINDVFQSGLDQTFQVE KRPHPLNSLSAAEISEAVTIVKAAPEFQPNTRFTEISLHEPDKAAVWAFALQGTPVDSPR TADVVMLDGKHVIEAVVDLQNKKILSWTPVKGAHGMVLLDDFVSVQNIINASSEFAEVLK KHGITDPSKVVTTPLTVGYFDGKDGLQQDARLLKVVSYLDTGDGNYWAHPIENLVAVVDL EAKKIIKIEEGPVIPVPMEPRPYDGRDRNAPAVKPLDITEPEGKNYTITGDTIHWQNWDF HLRLNSRVGPILSTVTYNDNGTKRQVMYEGSLGGMIVPYGDPDVGWYFKAYLDSGDYGMG TLTSPIVRGKDAPSNAVLLDETIADYTGKPTTIPGAVAIFERYAGPEYKHLEMGKPNVST ERRELVVRWISTVGNYDYIFDWVFHDNGTIGIDAGATGIEAVKGVMAKTMHDPSAKEDTR YGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPEVKPNTAGGPRTSTMQVNQYTI DSEQKAAQKFDPGTIRLLSNTSKENRMGNPVSYQIIPYAGGTHPAATGAKFAPDEWIYHR LSFMDKQLWVTRYHPTERYPEGKYPNRSAHDTGLGQYAQDDESLTNHDDVVWITTGTTHV ARAEEWPIMPTEWAHALLKPWNFFDETPTLGEKKK >gi|289777623|gb|GG745508.1| GENE 1601 1722664 - 1723614 993 316 aa, chain - ## HITS:1 COG:SMc00968 KEGG:ns NR:ns ## COG: SMc00968 COG0604 # Protein_GI_number: 15964637 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 10 312 8 319 322 131 36.0 2e-30 MFNDAIVYDRYGPPAAVLTLKRLPLAPLAGGRVRVRMRYAPVNPSDLIPVTGAYRHRTRL PAVAGYEGLGEVVAAPYGSRLTAGQRVLPLRGGGTWQRFIDLDETWLVPVPPVVDDLLAA RGYINPLTAMLMLKRWPVAGKHLVLTAASSSCASLLGQWALAMGARSVSGIIRSPQQRAR LEQAGIYPILDTDRALMEKVSQHSDLVFDAVGGELANTLLSVLPASSTLISYGLLSGRPL TQTRGSATVRKFHLREALPTLSVAAWRAAFDEIWLRLPTTTQPPAQRIALNDWREAIAAA DQPGRGGKILLDFTAG >gi|289777623|gb|GG745508.1| GENE 1602 1723670 - 1724488 878 272 aa, chain - ## HITS:1 COG:mlr7444 KEGG:ns NR:ns ## COG: mlr7444 COG5285 # Protein_GI_number: 13476191 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin # Organism: Mesorhizobium loti # 9 270 15 272 273 225 47.0 7e-59 MHNQHSPHIDQATIDRWQADGAVLLKGVFTPWVERLAEGVTALMASPSEYGHARTVIPKD GSPPFFQDYCNWSRIPAFSEFVFQSAAAEIAAALMQSQTAKFFHEHTLVKPAGGSTVTPW HHDQPYYCVSGRQNVSFWIPLDPVAEATSLRCIRGSHRWEEEYSPTRFNGTKLYEHTRFS TLPDIDAHEDEYDIVSWALEPGDAVAFHFRTVHGARGNPGARARRVFSARWVGDDAAFAD RGGVTSPPFPELTLRDGDPLDSPLFPQVWPRA >gi|289777623|gb|GG745508.1| GENE 1603 1724513 - 1725670 1282 385 aa, chain - ## HITS:1 COG:PA5390 KEGG:ns NR:ns ## COG: PA5390 COG0624 # Protein_GI_number: 15600583 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Pseudomonas aeruginosa # 3 365 6 370 384 473 65.0 1e-133 MNNILAALLAFDTTSRHSNLAMIDWIADFLAARGVASRRFYNPSGGKANLYARLGPSGGG GVMLSGHTDVVPVDGQAWSVPPFSLTERDGRYYGRGSADMKGFLACVLAAVDDFLAAPLR MPLHLAFSYDEEVGCLGVRSLVDFLQASPEKPALCLIGEPTEMQPVFGHKGKLAMRCCIE GQACHSAYAPQGVNAIRYAARLINHLDRLGVRLARQQDSRFSPPFSTLQVGTIQGGAALN IVPQSCRFDFEIRYLPGMRPEAVTEALAAYARRQLLPEMRRVGSGSDIQFQLLSHYPPLL SDPQSDFARWLAQWCGSDRFSTVAFGTEGGLFDEMGVATLVCGPGSMAQGHKADEYISIA QTERCMTMLRQLCAWMRAEPAEPLT >gi|289777623|gb|GG745508.1| GENE 1604 1725663 - 1726337 892 224 aa, chain - ## HITS:1 COG:PA5391 KEGG:ns NR:ns ## COG: PA5391 COG3342 # Protein_GI_number: 15600584 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 224 1 224 224 239 63.0 4e-63 MTLSISARCPESGQLGIAISSSSMAVGSRCPWLLPGVGAVASQNITLPSLGPHILGALEA GASVEQALNLALAEDRFREYRQVAAIDANGEVAAFSGEHTLGIGGTLAGDNCVAAGNMLA SHEVIAAMVAAFETASGELASRLLAGLRAGIAAGGEAGPVHSAAVKVVDDYPWPVVDLRI DWAETDPLAALEQLWLAWEPQMDAYITRALDPRDAPAYGVPGDE >gi|289777623|gb|GG745508.1| GENE 1605 1726334 - 1726768 779 144 aa, chain - ## HITS:1 COG:PA5392 KEGG:ns NR:ns ## COG: PA5392 COG0251 # Protein_GI_number: 15600585 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 139 1 139 140 268 92.0 2e-72 MPTHTRIRMFNTKETYPNQALNNDLCQAVRAGNTVYVRGQVGTDFAGNLIGLGDPRAQAE QAMKNVEQLLKEAGSDLSHIVKTTTYLIDPRYREPVYQEVGKWLKGVFPISTGVVVSALA QPQWLMEIDVTAVIPDDWQGEAAE >gi|289777623|gb|GG745508.1| GENE 1606 1726793 - 1728052 1439 419 aa, chain - ## HITS:1 COG:PA5393 KEGG:ns NR:ns ## COG: PA5393 COG2072 # Protein_GI_number: 15600586 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 5 416 17 427 450 622 74.0 1e-178 MTEQITEIDTLVVGAGQAGVAMSEHLTRLDIPHLVLEKQGIAQAWRSGRWDSLVANGPAW HDRFPGMVFPDCPADSFVGKEQVADYFAAYARSFNAPIRTGVEVFSAERLVGRPGFRIDT SQGVIEAQRIVAATGPFQRPVIPAIAPQSQAIQQLHSAHYFNPQQLPEGGVLVIGAGSSG VQIADELQRAGRAVWLSVGAHDRPPRRYRQRDFCWWLGVLGMWDAAANAPGKEHVTIAVS GARGGHTVDFRQLAHQGVTLVGQTRGFDGDKALFHHDLAENIRRGDASYLALLDAADAWV ARNGMDLPEEPSAREFLPDPACVTDPLLSLNLAEAGIGTIIWATGYTTDYRWLKVNAFDD AQRPQHHRGVSTEPGVYFLGLPWLSRRGSTFIWGVWHDAKYIADQIAIQRQYQRYQPSC >gi|289777623|gb|GG745508.1| GENE 1607 1728221 - 1729135 275 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 7 301 4 296 305 110 25 2e-22 MNRFTLKQLKYFVTVVETESIAEASRQLHIAQPSISIAIKNLESTFDQQLFIRHHAQGVS LTSSGRRIYDKAKELLRLSWEFEQNSRADKELVSGMISIGCFESVAPLYMPKLVAGFKKC YPEITLHLYDGEQHELMHGLHRGRFDLALVYDLELGHSINKERLNAPHKPYALLPAAHPL AQKAQVTLQELSREPMILLDAVPSKNYFISIFKEKGYHPEVAYSSPSIEMVRCMVGQGLG FSVLVTRPCCDMTYDGERVVQRDIADEMPASTLIMAHLANNEPTRPTQLFMDYCRSIELT PTHA >gi|289777623|gb|GG745508.1| GENE 1608 1729624 - 1731144 242 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 246 480 1 222 312 97 28 1e-18 MTFNWNYMLSLLSDADFWWATWTVIKLSLLTWGCSIVLGFILALAKQSPRGWLSTPARLY IWLFRSMPLLVLLIFVYNMPQALPSFAPVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSI PRGQSEAARALGLRYAGIQWRVIIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMV GQQLYSQNFLVMETMTAVAFYYIFIVTVFDFLLKRLENYLDVTQRNTARPVDAEMQRLAS ARRPAMARSVAQSHEPALQASKLHKAYNNVEVLGAVSLQIQPGEVVSVIGPSGSGKTTLI RLLNGLEQIDNGEIQINGQPFIHLDRQGQQKPRFMENAEHRLNIGMVFQSFNLFPHLTVF GNLLLAPRYHHLASDAELRQHACELLHKVGMLEHAWKYPHQLSGGQQQRVAIARALMMRP QIMLFDEPTSALDPEKVNEVLQVIESLAHEGITMVIVTHEMNFAFKVSDRIVFMEKGRVV CDDTPQAMRSGQHPRVEAFLKDVSLA >gi|289777623|gb|GG745508.1| GENE 1609 1731171 - 1732043 929 290 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2909 NR:ns ## KEGG: Kvar_2909 # Name: not_defined # Def: phytanoyl-CoA dioxygenase # Organism: K.variicola # Pathway: not_defined # 1 290 1 290 290 572 99.0 1e-162 MIAQWQIDQFHQQGFLVVEEVLSSADIAALQSDFDGWVEESRGHATVWGETLDGRPRFDI ERDHAPDHPSLRRVASPTEISEAYRHTALNSRMATIAAQLIGGSGTRFHHSKINSKLPHT ATEVKWHQDFLFTPHSNDDIITALLMVSEVTPENGPLNVVPGSHQGPLWSHWQEGRFTGA VDDEVVATHCQQPQACFGPAGSVCFMHTRLLHASSPNETALPRTLFISVYAAEDALPYGE NPLPSRHAGHLVAGEESGLVRSTNNQLRLPQKPRGASFFVQQAGADRASM >gi|289777623|gb|GG745508.1| GENE 1610 1732067 - 1732897 1015 276 aa, chain + ## HITS:1 COG:AGpA714 KEGG:ns NR:ns ## COG: AGpA714 COG0834 # Protein_GI_number: 16119712 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 265 2 266 269 104 29.0 2e-22 MTRIFAPRPLTLLLCAAAALTSFSALAFQQSGKITAGSDMTFFPYEYMENNKPAGFDIEL LDGLAKTMGREAVNIDTRFPNLIPGLQGGRFDITNSSMYITAERLKVIDMVPYLKSGEAI LARKGGDYQPKTPEDFCGHKIGSMGATSWLAQLQKLSADYCVKKGLKPIALSVYTTDPQT TQALLSRAVDAQITDAAVARGVVEKLGDRVVISSDTLIYPVLNGFGVKKGNTEVKTALEE ALKKYSATPEYAALLKKYHFQAPTADDLQTLMPKAE >gi|289777623|gb|GG745508.1| GENE 1611 1732903 - 1733634 1043 243 aa, chain + ## HITS:1 COG:mll4933 KEGG:ns NR:ns ## COG: mll4933 COG0235 # Protein_GI_number: 13474121 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Mesorhizobium loti # 10 239 37 268 272 214 47.0 2e-55 MRDSDEEQIRIDLAATFRIIAHLGMHEAVANHFSAALSADGKTFLLNPKWKHFSRIRASD LLVLNADDERCAARPDVDATAWAIHGQIHQRLPDVRVVLHLHPVYTTSLACLATPQILPI DQNTARYFNRVAVDTLYGGMADNAAEGARLAGLLADKRRLLMGNHGVLVTAPTIGEAFDD IWTLERACQILITAWSTGHPLKVLSDAVAEKTAQDWEKIADFSRQHFAEMKQLMIDLDPS LVD >gi|289777623|gb|GG745508.1| GENE 1612 1733653 - 1734543 1174 296 aa, chain - ## HITS:1 COG:MT2649 KEGG:ns NR:ns ## COG: MT2649 COG1893 # Protein_GI_number: 15842111 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 23 296 1 275 275 246 51.0 4e-65 MTAFPKVALIGPGAIGTTIAAALFEVGRAPMVCGRTAHSALVLRTDEGEIVVPGPVHTDP TAIAAPFDLVFVAVKTTQTEAIAPWLTALCSADTVVCVLQNGVEQRQQFAPLTGGATVLP SVVWFPAQRDADASVWLRATPRLTLPDLPGAERVQQALAGTRCAVDLAADFTTVAWRKLL QNAVAGLMVLTGRRAGMFAREDITALGLAYLRECLQVARAEGAALGDSVPEEIIAGFHRA PADLSTSILIDRLNGRPLEWDIRNGVVQRRGRQHGIPTPLSDIIVPLLAAASDGPG >gi|289777623|gb|GG745508.1| GENE 1613 1734668 - 1736167 2018 499 aa, chain - ## HITS:1 COG:feaB KEGG:ns NR:ns ## COG: feaB COG1012 # Protein_GI_number: 16129346 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 499 2 500 500 870 86.0 0 MSTSQIALLASVQQFLDRQHGLYIDGAPCAAQSENRLTVWDPATGQAIATTADASPADVD RAVMSAWRAFVDRRWAGRTPADRERILLRFADLVEQHGEELAQLETLEQGKSIAISRAFE VGCTLNWMRYTAGLTTKISGRTLDVSIPFPQGARYQAWTKKEPVGVVAGIVPWNFPLMIG MWKVMPALAAGCSIVIKPSETTPLTLLRVAELATLAGIPDGVFNVVTGSGAGCGAALTAH PQVAKVSFTGSTATGKQIARVAADRLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFL NQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMQETAQINPVVSRAHCDKVAAY LEEARQQKAELISGSAGPDTGGYYIPPTLVVNPDAGLRLTREEVFGPVVNLVRVADGEEA LRLANDSDFGLTASVWTRDLTQALNYTDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRD FGPDWLDGWCETKSVCVRY >gi|289777623|gb|GG745508.1| GENE 1614 1736406 - 1737305 988 299 aa, chain + ## HITS:1 COG:feaR KEGG:ns NR:ns ## COG: feaR COG2207 # Protein_GI_number: 16129345 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 10 299 9 301 301 393 64.0 1e-109 MTTAEGGLAYQRWLATINQVCGHFAARPLEGRFHGEIDARYAGNLKVSTVTAAGVNLYRT HNEIKRDNDAWFYTVFQLAGEAIIEQDDRQVTLAAGDITLIDAARPCSIVWQQTSRQASL LLPRQRVAPTGDIATACRLDKSLPMVQLSQRLLLESMGGTTLSASESEAALEAIACLLRP VLHQREPTPSRREKQFQKIIALIDASIQSEHLRPEWLASETGMSVRSLYRLFADKGLVVA QYIKNRRLDLCARALQNAHDDEKLAGIGYRWGFSDHSHFSTAFKQRFGVSPGEYRKRCR >gi|289777623|gb|GG745508.1| GENE 1615 1737306 - 1737629 451 107 aa, chain - ## HITS:1 COG:STM1644 KEGG:ns NR:ns ## COG: STM1644 COG3784 # Protein_GI_number: 16764988 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 130 68.0 4e-31 MRKRLLSAALALTLLSAPTLALTLSEARQQGRVGETLNGYLAPLRQDKETLALVKQINAA RSESYQQLADDNNLPVDEVAKMAGQKLVARAQPGEYVQGLNGQWRRK >gi|289777623|gb|GG745508.1| GENE 1616 1737637 - 1737822 294 61 aa, chain - ## HITS:1 COG:no KEGG:KPK_3020 NR:ns ## KEGG: KPK_3020 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 61 1 61 61 101 100.0 1e-20 MKKLLLAMVAPMLLAGCTPRIEIAASKEPITINMNVKIEHEIHIKVDKDVENLLKSRSDL F >gi|289777623|gb|GG745508.1| GENE 1617 1737819 - 1740458 3205 879 aa, chain - ## HITS:1 COG:no KEGG:KPK_3021 NR:ns ## KEGG: KPK_3021 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 879 1 879 879 1680 99.0 0 MKGKYKAAIALVLVLVLLPLTLLLTLTHWVPTLAGIWLPVGTRISLQESPRLTRSALLIP DLRYLVGDCELARVTDTRLSRPSRWRLHIGQLDINSACLSKLPASEPTPGSPRTLAEWQS MLPYSWLTIDNLRLSPWEKWQGRLVMSLTPAQQDIGFAGKELSLQARLRGQALTVSQFSA RLTDDQPPVKLVGTFHLPLVPDGLPVDGQMQGTFEFPQTAEWIDAELEWQHNRGQLLVTP RGEVEPILDLPWEITPERITISDGRWRTRYQNYPLSGRVALSVGNWQQGTEQMTVSGRLN VLTEGHAGKGNAVLNIGPGKLSMDNSDMPLRLTGEAKLGEMIFYAALPAQLSGSLVSPQL AFHPGALLRSRGRVIDALNIDEIRWPLAGVKVTQQGVDGRLQAILRAHEQQMGDFTLHLD GQASDFLPDSGRWQWRYWGEGHFTPMQARWDVKGSGEWRDNAITLSSLSTGFDKLEYGTM RVSTPRLTLEQPIRWLRDAQHPRLTGALSLDAAKTTFSGGSYLPASTLKFALDGRDPTWF QFTGALHADTIGPVRLTGRWDGERLRGQAWWPKQSLTVFQPLVPPDWKMNLREGSLYAQV AFSAAAGQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFRFSDGHWQLGTRRPVSLRIGE IVNQVTARNLTADLQGTWPWSEANPLQLSDVSVDLLGGKLTLLQLRMPQRDPALIRLQHI SSSELTSAVKVKQFAMSGAVSGALPLWLENNQWIIHDGWLRNDGPMTLRLDKDTADALVA DNVSAGAAINWLRYMEISRSWTRINLDNLGVLTLKATINGTSRVDGKSSTVHLNYAHEEN IFDLWRSLRFGDNLQAWLEQNAMLPVRRCTDGKTCKEPK >gi|289777623|gb|GG745508.1| GENE 1618 1740725 - 1741165 490 146 aa, chain + ## HITS:1 COG:mll0121 KEGG:ns NR:ns ## COG: mll0121 COG0586 # Protein_GI_number: 13470419 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Mesorhizobium loti # 1 141 22 164 213 82 39.0 2e-16 MVFLLTFTKSCALVSLAIPGTSGLLLLGTFASASLGHFLLMWSSASLGAIGGFWLSWWLG VRYRHRLTQLRWLTAERLARSRLFFQRRGLWAVFFSRFLSPLRATLPLVSGASGLPLWSF QLANVSSGLLWPFLLLSPGALSLSLW >gi|289777623|gb|GG745508.1| GENE 1619 1741313 - 1742302 1471 329 aa, chain + ## HITS:1 COG:ECs2002 KEGG:ns NR:ns ## COG: ECs2002 COG1052 # Protein_GI_number: 15831256 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 612 89.0 1e-175 MKIAVYSTKQYDKKYLQHVNDTYGFELEFFDFLLTAKTAKTANGCEAVCIFVNDDGSRPV LEELKAHGVKYIALRCAGFNNVDLEAAKELGLRVVRVPAYSPEAVAEHAIGMMMSLNRRI HRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAA ALELGVEYVDLATLYKESDVISLHCPLTDENYHLLNREAFDQMKDGVMVINTSRGALIDS QAAIDALKHQKIGALGLDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT AEALISISETTLGNLQQVANGETCPNAIV >gi|289777623|gb|GG745508.1| GENE 1620 1742425 - 1742865 529 146 aa, chain + ## HITS:1 COG:ECs2001 KEGG:ns NR:ns ## COG: ECs2001 COG3187 # Protein_GI_number: 15831255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Escherichia coli O157:H7 # 1 146 1 140 140 169 63.0 1e-42 MNKLAALLAAGMLLSGCVYNSKVSTGAEQLQHHRFVLTSVNGQAVNAGDRPLELSFGEKM AITGKMYVSGNMCNGFSGEGKVSDGELKVKSLAMTRMLCHDAQLNTLDATIGKMLREGAQ VDLTENQLTLATADQTLVYKLADLMH >gi|289777623|gb|GG745508.1| GENE 1621 1742911 - 1743174 205 87 aa, chain - ## HITS:1 COG:STM1649 KEGG:ns NR:ns ## COG: STM1649 COG3042 # Protein_GI_number: 16764993 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 38 86 1 49 51 59 87.0 2e-09 MRAAILVGCAALLLSACSSEPVQQATAAHVTPGMRAAMSDAGQANCAMIGGSLSVARQLD GSAIGMCALPNGKRCSEQALAGGSCGY >gi|289777623|gb|GG745508.1| GENE 1622 1743537 - 1745846 1546 769 aa, chain + ## HITS:1 COG:ECs2000_1 KEGG:ns NR:ns ## COG: ECs2000_1 COG0674 # Protein_GI_number: 15831254 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 751 90.0 0 MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDVPRVVEMQSE AGAIGAVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLMPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCASSVQEAQDFALISHIATLQSRVPFIHFFDGFRTSHEINKIA PLADDTIRALLPQDKIAEHRQRALNPEHPVIRGTSANPDTYFQSREATNPWYDAVYDHVE TAMNDFAAATGRQYKPFEFYGHPQAERVIVIMGSAIGTCEEVVDELLSRGEKVGVLKVRL YRPFSAAHLLAALPESARAVAVLDRTKEPGALAEPLYLDVMTALAEAFNRGERETLPRTI GGRYGLSSKEFGPECVLAVFSELQSAQPKPRFTVGIYDDVTNLSLPLGENTLPAEAKLEA LFYGLGSDGSVSATKNNIKIIGNSTPWFSQGYFVYDSKKAGGLTVSHLRVSEKPIRSSYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYGADEVWSRLPQEVQATLNQKKARF YVVNAAKIARECSLGARINTVMQMAFFHLTRILPGDSALAELQAAIAKSYSSKGQELVER NWQALALARESLAEVPLQPVNASSPNRPPVVSDAAPDSSKRSPPRCWPASAMRCRSPPCR RTAPGPWAPRAGRNAISPKRSPSGRKRCVRSATTASPPARTRRSAPKWSRRKRWRTPLPV CTRWTSNPAICADKNTFCRSPRKTAPAATCALKCARRKIARTRRSRPSI >gi|289777623|gb|GG745508.1| GENE 1623 1745471 - 1747063 2096 530 aa, chain + ## HITS:1 COG:STM1651_3 KEGG:ns NR:ns ## COG: STM1651_3 COG1013 # Protein_GI_number: 16764995 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Salmonella typhimurium LT2 # 155 525 1 371 375 722 94.0 0 MLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEALCTQCNHCVAACPHSAIR AKVVAPEEMENAPASLHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEI KAINMMSRLEHVEEEKVNYDYFLNLPEIDRTKLERIDIRTSQLISPLFEYSGACSGCGET PYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLG FRLTVDQHRQRVMRLLSEFADKLPAELNAALHAEATPEVRREQVAALRQSLAGVDGAEEL LTDADALVEKSVWLIGGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKAT PLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLI IAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAET LLNEQRFRRLNAQQPEVAEQLWKDAAADLQKRYDFLAQLAGKAEKSPSEG >gi|289777623|gb|GG745508.1| GENE 1624 1747422 - 1748546 1765 374 aa, chain + ## HITS:1 COG:STM1473 KEGG:ns NR:ns ## COG: STM1473 COG3203 # Protein_GI_number: 16764819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 374 1 377 377 499 79.0 1e-141 MKRKVLALVIPALLAAGAVHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFG FKGETQINDMLTGYGQWEYNVQANNTESSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLY DVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFFGLVEGLNFALQYQGKNEGQN AQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAFTSSDRTNDQMTQTNARG DKAEAWTAGLKYDANDIYLATMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAI SYLQSKGKDLYNNGRYADKDLVKYMDVGATYYFNRNMSTYVDYKINLLDDNDSFYKDNGI STDNIVALGLVYQF >gi|289777623|gb|GG745508.1| GENE 1625 1748689 - 1748901 252 70 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2924 NR:ns ## KEGG: Kvar_2924 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 70 1 70 70 127 100.0 2e-28 MHHHPVKSSRIISVAYDDASATLEIYFYHQPPLQYTGVPPRIFRDFLQVVSKGRFYDGVI KGKFPERKPR >gi|289777623|gb|GG745508.1| GENE 1626 1748984 - 1749418 664 144 aa, chain + ## HITS:1 COG:ECs1997 KEGG:ns NR:ns ## COG: ECs1997 COG0589 # Protein_GI_number: 15831251 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 25 168 168 214 75.0 5e-56 MSRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLSVIPSLPYYASLGMAYTAELPG MDELREGTETQLKEIAKQFSIPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDI TTYLLGSNAAAVVRHAECSVLVVR >gi|289777623|gb|GG745508.1| GENE 1627 1749650 - 1750585 1268 311 aa, chain + ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 605 92.0 1e-173 MLQNQEISKKEKYNIDKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR NLQKSAPISFSLVAVNLDQKQPGFPEHILPAYLEQLGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG KHIVIRPLAYCREKDIERFSQAKGFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE TMFSAMQNVVPSHLSDVNLFDFKGITHGSEVVDGGDLAFDREEIPLQPAGWQPEEEDARL DELRLNVVEVK >gi|289777623|gb|GG745508.1| GENE 1628 1750631 - 1752004 1525 457 aa, chain - ## HITS:1 COG:ECs1927 KEGG:ns NR:ns ## COG: ECs1927 COG0513 # Protein_GI_number: 15831181 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 772 86.0 0 MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG LLQHIDPARFETQSLVLCPTRELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQ HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPADRQT LLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDV AARGLDIKSLALVVNFELAWDPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADML QLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVLGALTGDMGFDGADIGKITV HPAHVYVAIRQNMAQKAYKQLQNGKIKGKACRVRLLK >gi|289777623|gb|GG745508.1| GENE 1629 1752530 - 1753513 964 327 aa, chain - ## HITS:1 COG:STM1656 KEGG:ns NR:ns ## COG: STM1656 COG0598 # Protein_GI_number: 16765000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Salmonella typhimurium LT2 # 1 327 1 327 327 580 85.0 1e-165 MDAIKGSELQIPDAIFAWVLDGQGGVKPLTDNDIIDKDKPCWLHLNYTHSDSADWLAATP LLPNNVRDALAGESTRPRVTRIGDGALITLRCINGSTDERPDQLVAMRLYMDERLIVSTR QRKVLALDDVLGDLKEGNGPTDGGSWLVEVCDALTDHASEFIEQLHDRIIDLEDDLLDQQ VPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDQRRRMQDIAERLGRGLDE IDSCIARTAIMSDEIAQIMQESLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGNSWH LGFSLFCLMLVVVIGGVAWWLHRSKWL >gi|289777623|gb|GG745508.1| GENE 1630 1753792 - 1754535 850 247 aa, chain + ## HITS:1 COG:BS_glcR KEGG:ns NR:ns ## COG: BS_glcR COG1349 # Protein_GI_number: 16080683 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 1 229 1 231 258 119 33.0 7e-27 MHKLARQKHILDRLSENGQLSISELVEGLQVSADTIRRDLSELEKQGVLQKSHGGAIALN VPAMTRQGRNALLPQTKQRLGQQVAARIPLGSTLFLDAGSTVLAVAAQLKGPMTVITPSL DIAQLFSDRADIQLILLGGQWDSEQRLFAGSATLSLVARYRADIAILGACALHAGLGLSA SQEADADVKRAMLAASAEHWLVADHTKVNHCEPWLVAGLSDIHHLFLDRPWAELGDDPAL SVHIADA >gi|289777623|gb|GG745508.1| GENE 1631 1754552 - 1755616 1401 354 aa, chain + ## HITS:1 COG:PA5149 KEGG:ns NR:ns ## COG: PA5149 COG0673 # Protein_GI_number: 15600342 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Pseudomonas aeruginosa # 6 352 11 358 360 376 56.0 1e-104 MSNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAA VQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLS VFHNRRWDSDYLGIRQVIEQGAIGTVKHFESHFDRFRPEVRVRWREQNVPGSGLWFDLGP HLIDQALQLFGLPQSVQGNIATLRDGAEINDWAHVVLNYPAHKAILHCSMLVAGGSSRFT VHGDKGSVVKARADQQESQLLAGVAPGSAGWGEDNDALVVYDASLQTHSQATPSGDQRQY YMQIRDALNGQIANPVPPVEALAVMAVLEAAVRAAESGMVQTLDLTDEERNALR >gi|289777623|gb|GG745508.1| GENE 1632 1755853 - 1756047 337 64 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2931 NR:ns ## KEGG: Kvar_2931 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 64 1 64 64 121 100.0 9e-27 MYYTLGDTTLHFYRYQCKFYVAHWDGGNVMDEKFKPFIEQITEKTGLDAKRVETAARDYF TNVD >gi|289777623|gb|GG745508.1| GENE 1633 1756163 - 1756912 723 249 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2932 NR:ns ## KEGG: Kvar_2932 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 249 1 249 249 444 100.0 1e-123 MKHVHKLVWIGLFVNIIICFVARNLLLDEGQLNFHHRADSMWSWLVLALFIAVVVQAVSI MLSGRYPYLAIVLAFIGGIVMVPASMIFLVGCMFSFQTRINAGFTPWRSTTGAMGRDDNH QLLTFNASGFYPQGALALIAGIIILMIGMGIGGVFIAAGIVALCNGYRLQNRVVIGVSGE SMIFTPGLYADTYVIPLGDVVLAERGNNDAKVRLRIRSSGRSFTLRKKLLAGDNVNDAFA AILAKLSTV >gi|289777623|gb|GG745508.1| GENE 1634 1757148 - 1758524 1741 458 aa, chain - ## HITS:1 COG:YPO3421 KEGG:ns NR:ns ## COG: YPO3421 COG1113 # Protein_GI_number: 16123570 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 1 448 1 449 465 644 77.0 0 MTTQQEHQLKRGLKNRHIQLIALGGAVGTGLFLGIAQTIRMAGPSVLLGYAIAGAIAFFI MRQLGEMVVEEPVAGSFSHFANRYWGPFAGFMSGWNYWVLYVLVSMAELTAVGIYIQYWW PEVPAWLSAAIFFVAINAINLTNVKVYGELEFWFSIVKVAAIISMIAFGSYLLFSGHGGP AATVANLWQDGGFFPNGITGLVMAMAVIMFSFGGLELVGITAAEADEPHKTIPKATNQVI YRILLFYVGSLAVLLSLYPWRNVVEGGSPFVLIFHAIDSNIVANALNLVVLTAALSVYNS CVYCNSRMLFGLAQQGNAPRALLRVNRRGIPLTALAVSAVATALCVVINYVMPGKAFGLL MALVVAALVINWAMICITHLKFRRAMQRAGKVTAFQSLGYPLTNWLCLLFLAGILVVMYL TPDIRISVCLIPVWLLILAAGYLLRKKSAPALVAMKEG >gi|289777623|gb|GG745508.1| GENE 1635 1758859 - 1759338 603 159 aa, chain + ## HITS:1 COG:mlr8310 KEGG:ns NR:ns ## COG: mlr8310 COG1522 # Protein_GI_number: 13476862 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 4 151 12 159 161 116 41.0 2e-26 MYNIDDYDLKILTLLQANGRLTNQELSDLIGLSASQCSRRRIALEQAQLILGYHARLAPD AAGQEMLGLIEVRLLNHTPQCVESFHQMLSEVDAILDAWKTTGDADYLLRVTVPDLPGLS HLISHILAQNKGVAHLKTAVILNRLKENGQLMPGPDPLR >gi|289777623|gb|GG745508.1| GENE 1636 1759589 - 1760203 952 204 aa, chain + ## HITS:1 COG:BMEI1312 KEGG:ns NR:ns ## COG: BMEI1312 COG1284 # Protein_GI_number: 17987595 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 12 202 23 213 217 178 51.0 6e-45 MDNILSPEKLTHTWLEDTLALLFGTLMISFGIILFRQAGALTGGTAGMAFLIHYATHLPF GVVFFVINLPFYWLSVRRMGAAFTLKTFCAVGLVSLFSDLHGYFIHVDRLNPYYATLFGN IMVGIGFVVLFRHKASLGGVNILALYLQDKSGIRAGKFQMVVDACIVTASLWVVSLPMLL VSILGAVILNSIIAMNHRPGRYAV >gi|289777623|gb|GG745508.1| GENE 1637 1760242 - 1761441 1429 399 aa, chain + ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 397 610 76.0 1e-174 MFQNVDAYAGDPILSLMEAFQQDPRADKVNLSIGLYYNEQAIIPQLEAVRQAADRLQSQQ QKASLYLPMEGLAPYRRAVQTLLFGDNHPALRAGRIATIQTLGGSGALKVGADFLKRYFP DSAVWVSDPTWENHVAIFAGAGFEVHTYPWFDSATRGVNFPAMLAALQQLPPRSIVLLHP CCHNPTGADLTREQWDRVIEVLIGRELIPFLDIAYQGFGRGLDEDAYAIRAIASAGLTAL VSNSFSKIFSLYGERVGGLSVVCDNADIAGRVLGQLKATVRRNYSSPPGFGAQVVSQVLN APALNALWQEEVEAMRTRISAMRVALVTALQAAQPEGDFSYLLTQRGMFSYTGFSTRQVD ILREEHGIYLIASGRVCVAGLNHGNIARVAHAFAAVSTR >gi|289777623|gb|GG745508.1| GENE 1638 1761486 - 1762154 1091 222 aa, chain - ## HITS:1 COG:SA0421 KEGG:ns NR:ns ## COG: SA0421 COG2011 # Protein_GI_number: 15926140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Staphylococcus aureus N315 # 13 221 10 218 219 198 67.0 8e-51 MFDLIDTAITGDQFLLALHDTLIMVAVSLGFGALIGVPLGIVLVVCRPGGIVANPVVHQA LNPLINVLRSLPFIILLIVILPFTRLLVGTTIGTAGAIVPLIVFVAPYIARLVESSLLEV DEGILEAADAMGATPLQTVWHFMLPEAAASLILALTTATIGLLGATAMAGTVGGGGIGDL AITYGYQRFDAFATLTTALVLIVIVQLIQTLGTRLARRLRRE >gi|289777623|gb|GG745508.1| GENE 1639 1762147 - 1763160 1109 337 aa, chain - ## HITS:1 COG:SA0420 KEGG:ns NR:ns ## COG: SA0420 COG1135 # Protein_GI_number: 15926139 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Staphylococcus aureus N315 # 1 326 1 328 341 322 51.0 9e-88 MIEFRHVSKSFSRKGHPVLALQDINLSIERGDIFGIIGYSGAGKSTLLRLINRLETPGEG EVLLNGEPLQACSGQRLQAIKKDIGMIFQNFNLLNSKTVFHNIAIPLILQGRDKAFIQAR VAELLAFVDLSDKIHSYPNELSGGQKQRVGIARALATNPSVLLCDEATSALDPHTTVQIL LLLQEINRRYGITIVLITHEMSVIQKICHKVAVMQAGRIVEQGTVFDLFAQPQHPVTASF VQSVVHDRLPQRVASLLQRDNGARAIRLEFIGATAQQPIINHLIREYAVEVNILFASMSE VQGRILGFMIVQLLGEPDETDRAITHLADAGVKITHV >gi|289777623|gb|GG745508.1| GENE 1640 1763169 - 1763975 886 268 aa, chain - ## HITS:1 COG:STM0510 KEGG:ns NR:ns ## COG: STM0510 COG1464 # Protein_GI_number: 16763890 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Salmonella typhimurium LT2 # 1 267 3 272 276 161 33.0 1e-39 MNKSVALGMTLALLSATSFYAAADDHLIRVGFNPGPYKEQFEKGVAPYLLSKGYKIEYKD FSDGIQVNDAVARGDIEANIMQHPVYLKAINERLGIDNVGIVQVPTPPMGLYGGKLTTLG TPAAGTVVSVPNQPSNEYRAVLVLQSLGWVKVKPDSDPATFSQRNIVDNPYKIVLKEMDN AQQVRALPDVDYGLIQGNFAVSSGMSLTSALKLEAATSHFINVVTVAGKNQKAQFAKDII DGYHSADFKKYILSHPQYDGYLLPDYLK >gi|289777623|gb|GG745508.1| GENE 1641 1764196 - 1765371 1440 391 aa, chain + ## HITS:1 COG:lin0314 KEGG:ns NR:ns ## COG: lin0314 COG0436 # Protein_GI_number: 16799391 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Listeria innocua # 19 391 17 387 393 328 43.0 1e-89 MPDFTASPLVDALEENLFSLLEKLAAEVNTEALPLIDLSSGSPDQPTPPEVIDSLQSAIH RRENHGYPSFWGKPQVREAIAQFYRRQYDVELDPHSEVAVFQGSHIGIGGIPRALLSPGQ YLISTDPCYPIYRSAALQSQATFYGLPLRAENHFLPDFNDLPREVADKAGLVVLNYPHNP TGALATPALFASALQFARRHQVPILHDFAYAAIGSAASDAPLSLFSQPDAKAWGVETYTF SKTFNMAGWRFGFAVGNASIIRAFKKLHTHSYSTVFGAIQDAAIAALNLPAERIAQLTAV YHQRREWVLRRLAALRWPARAAQGTFFLWLGVPPGYRSQEFARLLLQEAHILVAPGTGFG EGGEGFIRISLTADDDALSNALDRLARLALF >gi|289777623|gb|GG745508.1| GENE 1642 1765418 - 1766452 1079 344 aa, chain - ## HITS:1 COG:AGpA466 KEGG:ns NR:ns ## COG: AGpA466 COG0604 # Protein_GI_number: 16119551 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 336 15 350 353 385 63.0 1e-107 MSTQMMKAVQQHAFGGPEVLSYDDAPLPVLQAGEVLVQVHAVGVNPPDSYLRDGYQQLPP EWRPEVRFPLILGTDLSGMVVARADDVREVAVGDEVYAMARFPEGAAGGSRAYAEYVSVP VSDLARKPLTLSHQQAAAVPMSLLTAWQFMIDPGHEVANPLQPGPHRPAPLAGKRVLVNG AAGGVGHFAVQLAKWQGAEVIAVAAGRHEAFLRQLGADAVIDYTTTAVEEAVRDLDLVID APGGPASGRFLRTLRRGGALYPIFPLGFAGAEEARQRGVTVSTTQVRSSGAQLARLAGLL DAGVIRVAIDSVFPLAQAQMAHERAVQGRLQGKIVLSVMDSSAE >gi|289777623|gb|GG745508.1| GENE 1643 1766541 - 1767089 438 182 aa, chain + ## HITS:1 COG:AGpA729 KEGG:ns NR:ns ## COG: AGpA729 COG1309 # Protein_GI_number: 16119724 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 178 31 208 210 96 37.0 2e-20 MRADARKNYDLLIEVARDVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS RFATLTARAESLLLAADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDPESALHSACVA LRAAGTSLLTRAQQAGQARPDLSGDELFDLIAALAWLREQPSHAPRAERILAVLADAILT AG >gi|289777623|gb|GG745508.1| GENE 1644 1767146 - 1768057 772 303 aa, chain - ## HITS:1 COG:mll7605 KEGG:ns NR:ns ## COG: mll7605 COG0702 # Protein_GI_number: 13476318 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Mesorhizobium loti # 1 280 1 279 294 132 38.0 6e-31 MNNAQSVLVFGATGQQGGSVARALLHRGWRVRALVRDPFSAGAAALAARGVELVVGTFED RAAMRSAMAGVDGVFSVQPSSPGGTVTDEQEVRYGITIADLAVECGVKHLVYSSGSAAGE TPTGVAHYDTKAEIERHIRRLPLAVTIVRPATFMELLVMPGFGLDEGHFHFFMLPEGRMQ VLAVEDIGHLVAAVFAAPARFAGKTFEIASDSVTGRQLEALFSAAAGRPIPYSRFSDEVL AASPFLHKLTGLVDDGRLAGHADLNALRQLHPQLHTFAGWLSGPGRPAFERALTSGARWA FDR >gi|289777623|gb|GG745508.1| GENE 1645 1768057 - 1768917 825 286 aa, chain - ## HITS:1 COG:RSc2214 KEGG:ns NR:ns ## COG: RSc2214 COG0491 # Protein_GI_number: 17546933 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Ralstonia solanacearum # 46 273 101 325 339 80 28.0 3e-15 MQTYQTGDSLIFKVPEREITLQPAALYPEAFPVAEADNVIQSIALSIHSWVVQTPHDLIV IDTATGNGRERGGNPLYHQLNTPYLENLRAAGVNPEDVTLVLLTHLHTDHVGWNTVRQDD RWVPLFPNARYLCSAKELTRVKNSERYRALWLDSLLPVIEAGQLETVDVAARPRVGGRID FIPTPGHSPDHAALILAAGDDYACFSGDLLHSPLQFAHPQWNSAFCGDPRQAEASRREMM AWGASHHAQWFTGHFAGSSCGWLEEDKQGDYRWREAGQQAADKGKQ >gi|289777623|gb|GG745508.1| GENE 1646 1769008 - 1769931 1148 307 aa, chain + ## HITS:1 COG:RSc1092 KEGG:ns NR:ns ## COG: RSc1092 COG0583 # Protein_GI_number: 17545811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 8 296 2 290 300 153 30.0 4e-37 MKKIIENDFSRIDLNLLTVLMVLYREGSVTRTAEVLHLGQPAISGALKRLREMFDDPLFV RSARGMLPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQ LLPGLMQEAPGVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTTL WSPQQIPCRGPLSVSDFVAREHVMVAYRETGHGEIDRQLASQGLARRVRFATQNFSTFPL LLTTLPLFATVPQGLAQHWQAQYALRADAPPVAYPEFTLCILRHKRRAQDPALNWLVTKL KQAMRGQ >gi|289777623|gb|GG745508.1| GENE 1647 1769951 - 1770856 954 301 aa, chain - ## HITS:1 COG:STM1677 KEGG:ns NR:ns ## COG: STM1677 COG0583 # Protein_GI_number: 16765020 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 297 1 297 301 466 74.0 1e-131 MDRLDAMRLYVAVVDAHSFARAAEVLGQPRSTVSRVVKELEAWLGAQLLQRTTRKLSVTA EGRRYYEECKRLLAEMAAMEASFPGRSAQPAGRFKVGMPQSLARHCILPRIGEFLQQYPD LELILCSSDNVEDIIQEGFDCVIRTGRIEDSTTLVARPLARYRWMVLASPAWLAAHGRPQ SIDDLHQHRAVGYLNHRTGRTIDWLFSLDDGDCAIRMQETLVVDDTDAYIQAGIQGLGLI RVASYLAQPYLQSGALVACLEQVASDLPLSLVYPQNRYLPPAVRAFYDWSRRVLQPPLSE A >gi|289777623|gb|GG745508.1| GENE 1648 1770995 - 1771924 859 309 aa, chain + ## HITS:1 COG:no KEGG:KPK_3052 NR:ns ## KEGG: KPK_3052 # Name: not_defined # Def: NmrA family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 309 1 309 309 596 99.0 1e-169 MKTDNLNHEEKVLVLGSGQLGAAVLDALVPAVIQRQGTVSVIVSPAARDEAGQLRSANHQ ALADAGATLLAVDIAGSAMETLADQFRGFTTVINCMGFVAGPGTQLKITRAVLAAGVPRY FPWQFGVNYDVVGKGSGQPVWDEQYDVRTLLRAQRATEWVIVSTGMFTSFLFEPDFDVVN LSNRTLHALGSWDTQVTVTSPADIGRLTTAIYLHQPRIVNEVVFVAGETTSYRQLADTVE RVTQQTFSKAVHTLPALLEQLRTNPDDAMLRYRAAFARGDGVWWPMGDTWNARHQLPTQD IAGWLQTAR >gi|289777623|gb|GG745508.1| GENE 1649 1771950 - 1772156 262 68 aa, chain + ## HITS:1 COG:no KEGG:KPK_3053 NR:ns ## KEGG: KPK_3053 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 68 1 68 68 114 100.0 2e-24 MNKLIPLIVLSCLLPLAANARTITATGDTLDHAESKIRQQAAREGATTYRITEARMGNKV HITAKIAD >gi|289777623|gb|GG745508.1| GENE 1650 1772207 - 1773085 914 292 aa, chain - ## HITS:1 COG:SMb21385 KEGG:ns NR:ns ## COG: SMb21385 COG2207 # Protein_GI_number: 16264711 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 3 289 2 292 311 213 44.0 4e-55 MRDALFDLCRRFADAHVDSSGVAVTPVPGITLVRALHPGDLQAAIARPLVAMLLQGRKSV TTGLASFDYGPGEAMVIAADVPTTSQITEASQRFPYYALVLELDLAILRELQEAGPSGPD EAPRVGIEPMNADVTDAAYRLARLFDQPGALAALGEGLRRELHYWLLQSVHGPAIRALGA VDSYSARIRRAVAMLRRDFMQPVSVDALADAAGMSVSVFHRHFRAMTTLSPLQFQKQLRL IHARRLMLAEGMSIAQAAGEVGYISVSQFTREYARLYGAPPGRDRRREKMSA >gi|289777623|gb|GG745508.1| GENE 1651 1773244 - 1773999 1027 251 aa, chain + ## HITS:1 COG:RSc1730 KEGG:ns NR:ns ## COG: RSc1730 COG1028 # Protein_GI_number: 17546449 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 2 248 8 253 256 262 63.0 4e-70 MTKIALITGANRGLGRQTALDIARQGGDVIVTYRGNLEQAEAVVADIRALGRKAIVLPLD MAQTASFPAFADSLGSALASVWGRATFDHLINNAGHGEFAPLAETREAQFDGLFNVHVKG VFFLVQTLLPLLADGGRIVNFSSGLTRVSYPGFSAYAAAKAAVEMLSVYMARELGGRGIT VNTIAPGAIATDFGGGLVRDDAGVNAQFAAMTALGRVGVPEDIGPMIASLLRDDNRWVTA QRIEVSGGQTI >gi|289777623|gb|GG745508.1| GENE 1652 1774004 - 1774597 529 197 aa, chain - ## HITS:1 COG:STM1674 KEGG:ns NR:ns ## COG: STM1674 COG1309 # Protein_GI_number: 16765017 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 196 2 195 196 249 70.0 3e-66 MTTTKSGRTPGRPRQFDAEQAIETAQRLFHARGYDAVSVADLTQAFGINPPSFYAAFGSK LGLYTRVLQRYSQTGAIPIDALLRDDQPVAASLIAVLQEAARRYVADPAAAGCLVLEGVH CQDADARGAAGEWHAAARAKIQQYIARHRPQDALRVTDYMDTLMLGLSAKAREGDSLPRL LETVRLAGLALEHILPA >gi|289777623|gb|GG745508.1| GENE 1653 1774671 - 1775384 280 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 234 4 239 242 112 34 6e-23 MTAFHNKSVLVLGGSRGIGAAIVRRFVADGASVVFSYSGSPEAAERLAAETGSTAVQADS ADRDAVISLVRDSGPLDVLVVNAGIAIFGDALEQDSDAIDRLFRINIHAPYHASVEAARR MPEGGRIIVIGSVNGDRMPVPGMAAYAVSKSALQGLARGLARDFGPRGITVNVVQPGPVD TDANPENGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA >gi|289777623|gb|GG745508.1| GENE 1654 1775451 - 1775945 325 164 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2953 NR:ns ## KEGG: Kvar_2953 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 164 1 164 164 306 95.0 2e-82 MTARERFFKKLQQQQNPQRTAALDGSAAADIARFRQQMAALAQQVSQWFDGTGIEVVIST RHLHDLSTLGYSLNSGICRYDIPASRLQNGERSVNIVPQQLLDGVEKGIVTLSLEAPGGA GSREVFYLSLAPEDGWMIRKAHQSPQARRMLTEDRFFMAVDSLA >gi|289777623|gb|GG745508.1| GENE 1655 1776053 - 1776595 515 180 aa, chain - ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 18 177 1 160 162 181 56.0 6e-46 MLRTSLTKTACLLPLLALCLSGCGLTQRVSEGTKTAFNAVFYKQINTLHLDFTAREALNT DARENHSLSEPVVVRIYQLKERQTFDRLVYQQLLEEGDILLAADLLASRDVVISPGGDAS LNMPLEAEATFVAVVGLFRHPDTDRNTWKQVLGREELDPDKPRIFTAERNQLRLRPEAAK >gi|289777623|gb|GG745508.1| GENE 1656 1776573 - 1777658 833 361 aa, chain - ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 361 1 360 361 428 61.0 1e-120 MGREAQPTHSRLNPRLEADLPRINFYRFCQLLEKRRPGQPLMGATSHPADDPVRFYPHPG MGFPASELRAVEYDEADDCGPPVIRTTFMGLYGVDSPLPTAYLDDIAQRREGHEALQGLL DIFSHRIMTQFYRIWRKYSWPATFEPGGTDRLSQSLLGLAGLGIPGTTQHIASPASRFLA LTGVLRQPGKTQQGIQALVTLLAPETTVRVSPYSLRPVAISQPLGFYGDDDFLLDGNMPL GDEAMDASSQLLVALTTDNPAEAQGWKPDGPLFRDFLILLRVYLGWRFRADITLTAPTRL LAVPPLGDEPFWLGMNGVLGVGEGESEDDIPQTFTTELGTYTGLQPATFLQGNRRVTYKF D >gi|289777623|gb|GG745508.1| GENE 1657 1777622 - 1779376 2032 584 aa, chain - ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 584 1 587 587 941 75.0 0 MDDLTLRYYDAEMRYLLEAGEEFARAHPEQAAMLNLDKAGARDPFVERLFEGFAFLMGRM REKLDDDLPELTEGVVSLLWPHYLRTIPSMSVVEFTPDWPEMKEPMTMVKGFEVLSRPIG EKGTRCRYTTTKAIALQPLSLEHARLATDTDGRSVITLRFTCSQLTDWSRVDLSHIPLYC NADAPLACAMHEAFTLNVARMWLRMSDEVDRRPLDGYFSALGFGEEDSLWPEDGRSFRGY QLLLEYFTFREKFMFIDLRGLETVAFPAGLAWFEIDVVLAERWEHDFRFSEKQLRLHCVP VINLFPLESDPLTINSLQTEYPLRPMRVQDGHTEIYTVDSVISSHQQVYAPFSSFRHKGG MMRHDAADYYYHTRVRRGPSGLYNTWLIVGGEAFDNHTVPEDESLSLTLTGTNGQLPRRA LQSTVLDTVMKTTSASVAVRNLCAPTLPCYPPAQDRFHWRVLSHLGSSFLSLMDNAEVLR GTLALYEWTDSEMNRRRLEAILDVNHRATERFAQGHLVRGVQIEVTLDSHGFAGRGDICL FGEMLSRFFALYTDIYLFNRLIIILQPTGERLEWEEKHSRRIPG >gi|289777623|gb|GG745508.1| GENE 1658 1779456 - 1781048 1235 530 aa, chain - ## HITS:1 COG:YPO1483 KEGG:ns NR:ns ## COG: YPO1483 COG3515 # Protein_GI_number: 16121755 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 530 1 533 533 582 58.0 1e-166 MSILQNLVAASQLDESVLRQQARSRQAQWQSWLAPISDTQPTGSDPGYDDDFQRIREEVN KISGVDTELICQLAEKLLTQTCKDLRVITFYVWARLQREGESGLAEGVTLLAAMLERFGA MLHPQRERSCKSALEWLGSRRMSDSLSLYPEVDMTTMQVIIGALLLAEASFAGLAEASRP DLSGLYQILENRLVQNGGARSLVPQTSREEHDLLPQHADTAPVMHTVTSGRDLLDQAKVL AKYLRECPGGWLAGHHLMKSVRWDTLTELPPLDASGRTRLLPPKPESKAHLKRLYLQKSW SELLEHTDTLLAQGVNHLWLDVQWYAWQALLKLDADSVRADILCRDMKGLLARLPGLETL AFNDGTPFADEVTLNWLNERVLDEMAGWQDEPVMAATSADEVLSLEPEVLTRADDEGIES ALNWLQAQPGYTTSRNRWLMRLLMARVSEQYGKNEMALHLLAELDSRAREMTLEQWKPEL IFEVKARRLRLLRGKAGRSEAEKNRLLPEMESLLAGLIALDPARAAVLCA >gi|289777623|gb|GG745508.1| GENE 1659 1781045 - 1784494 3002 1149 aa, chain - ## HITS:1 COG:YPO1482 KEGG:ns NR:ns ## COG: YPO1482 COG3523 # Protein_GI_number: 16121754 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 95 1134 98 1129 1140 1229 62.0 0 METDKDKNQTQEISAGITVLLIAVAVTLVIMLGGFAYWLIAGERSTEWSVISPVLLVCSL LWVTLACVIALAFLAVHFWIISRVKRTTAISQTNEAKKKARERRLTLARDIGTVLRKRYS LFWRRKVRLLLVTGDEAAIEQLAPGLCQQRWLEGQRTVLIYGGSLLSEPDNQQYAALRKL RRGRPLDGIVRVMPSSLTLTPQISESDLHGLEKISELLGYAAPVWLWKLCDSEWSQADRA VQAVGVSFPLRANEDDVARQLAQMLPMLREQGMHQIAADTRHDFLLRLGQQLIDGEIAQW RWQLAPWLTASRQRFALRGLMFSLPEPRTVDPYQEADTSPAGQPHLLTLPATWQGIVDDC RRLRGHHVGMAWERGLACGLLAILGLWAAGLLLSFALNYSQIASVAGKARDLVAHPSVSD YQLTALHALRNEAGRLVQDGQKGAPWYRRFGLDHHQQLLDAVLPWYGVANHRLIRDPANA ALQQALSALVNSAPNSDQRAQLAKPGYDQLKAWLMMARPDKADGAFFAQTMKAVQPTRMG ISTGLWQSLAPDLWAFYLSLLPERPEWKIIPDAQRVSQSRQVLLQQLGRRNAESTLYENM LKSVRRNFADVSLEDMTSGTDARRLFTTDEVVPGMFTRQAWEGGIQQAIDKAASSRREEI DWVLSDSRKTMSTDLSPEALKARLTRRYFTDFAGSWLNFLNSLRLNPTTNIADVTDQLTL ISDVRQSPLIALMNTLAWQGQAGQQREGLSDSLIKSAKDLVGGKDKPVIDQSATGPQGPL DDTFGPLLQLMGKNTGSNVMSADSTLSLQTYLTRITRVRLRLQQVANASDPQEMMQTLAQ TVFQGKSVDLTDTQQYGSLISASLGEEWSGFGNTLFVQPLTQAWETVLLPSAASLNDKWR RSVVANWHTAFDGRFPFAASKSDASLPMLAEFVRKDSGRIERFLTTELNGVLHKEGSQWV PDKVNSHGLVFNPAFLRAINQLSQLSDILFTDGSQGISFELQARPAPEVVETQLTIDGQK LRYFNQMADWQTFRWPGETYKPGTLLTWTTVNAGTRLFGDYSGTWGFIRWLEQGKRQQLE RSQWMMSFTAPDGRTLQWVLRSQLGSGPLALLALRGLTLPDQIFSVDAAESAQALTTGVG NSDMDEMEL >gi|289777623|gb|GG745508.1| GENE 1660 1784484 - 1785461 149 325 aa, chain - ## HITS:1 COG:no KEGG:Spro_1797 NR:ns ## KEGG: Spro_1797 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 9 324 2 317 320 287 46.0 5e-76 MVGMVLLGGVVWFVRTIFFRLSVHHSHTWEREAENERRHWWEIHRRQFALKDIVLIGPAG AELSDWLRVIKREHQAPLVRQESLGKSLRIARSFSSALIEREKQLAQMLVLQWKRQRGKE LFVSPEKYFWQGSPEAWQAFVAQLIESFPGITAPELPELWQGEKTLSVLAKVLADKKQLA NFLIAGCQSSSPASDSTRPAGECAVLWLAGNQGDVTLSRGEFFEPSDSESLRHVALRAEK QSELNESPERCILFSHPEQPELADCGWNVTHNIQDDYWGDPGKLDALVVISLAAITAKTE AKPCGWIASDPLHTLALGIVKPHGN >gi|289777623|gb|GG745508.1| GENE 1661 1785614 - 1785871 114 85 aa, chain - ## HITS:1 COG:YPO0866 KEGG:ns NR:ns ## COG: YPO0866 COG4104 # Protein_GI_number: 16121173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 77 14 91 101 60 46.0 9e-10 MKHIIRQGDSLKEYGGSVIGGHYLYFGKGIAVKGDAVKCNKHGMTTIVEGSSLTKVDGQP VALHGHRCACGCTLVSSNPDCRVAQ >gi|289777623|gb|GG745508.1| GENE 1662 1785914 - 1787032 149 372 aa, chain - ## HITS:1 COG:no KEGG:Spro_1795 NR:ns ## KEGG: Spro_1795 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 372 434 805 815 275 42.0 2e-72 MPLELGAEFFVSELLINKFNAWRELTLNLSSDGAESSTDALQFNPIRASSNIINALENQL GWITAWRIGRYVNGAYKSQGFYKSSGVAWQNKDSDPATLAASKAEQEQKQKDVDDARLRA IVNNRFKNKKFIPLPPGPKDFDPAIAQVQLRQAAEEFNADYQSKPRPVTGNWKYTVSQQL SNVIYSFSENDFSVEYERIKSSGDSKFNKLFPRQSAGETAQSPESLVRSLFDDQVHDSRA WFMHATFGDREPWGSYFLYRMIFFGELMSKNVSLIAKYGRFVEGQLKSAIKGTSLIFDNT TINSNISDEITSGIKQVISIIPASASGPEVINAESTIQPAMTNGIAPLSSQTRKALDAAK LAETKADILKIW >gi|289777623|gb|GG745508.1| GENE 1663 1787062 - 1787244 60 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMPASVLLAEHQHRMLKHIYHVKLFVIINKYHYRRLPFLGPPEDIPHQYPSAFQDKPLP >gi|289777623|gb|GG745508.1| GENE 1664 1788307 - 1788504 96 65 aa, chain - ## HITS:1 COG:no KEGG:Spro_1794 NR:ns ## KEGG: Spro_1794 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 65 106 170 170 104 70.0 1e-21 MKLLNREHSLIVPVPDYNGQKTCGIKIHFLPCDKIKVTTSCYDYGNPNYPIKDPIKMEEP EVCPK >gi|289777623|gb|GG745508.1| GENE 1665 1789387 - 1789821 135 144 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2962 NR:ns ## KEGG: Kvar_2962 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 16 141 17 138 173 186 70.0 4e-46 MKSPFFFLVTAVLLLTGCNQPAESDSVSGGGGTIEAINHTHWAINHFSVNGQSGVDIIGP WQGGGGAGYFGVPSKWEPGMTVKIEWETGEASTDGFPGYDHWDEYLEWEKKIKASHIEHT AIVPIPDYNGQKTCGIKIHFLLAS >gi|289777623|gb|GG745508.1| GENE 1666 1789917 - 1790126 112 69 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2962 NR:ns ## KEGG: Kvar_2962 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 2 69 106 173 173 110 70.0 2e-23 MEKKIKASHKEHSALVPVPDYNGQKTCGIKIHFLPCDKVKVTTSCYDYGNPNYPIKDPIK MEEPGVCPE >gi|289777623|gb|GG745508.1| GENE 1667 1790111 - 1790446 282 111 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2962 NR:ns ## KEGG: Kvar_2962 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 16 111 17 108 173 136 69.0 4e-31 MKSPFLFLVTAVLLLTGCNQPAESDSVSGGGGTIEAINHTHWAINHFSVNGQSGVDIIGP WQGGGGAGYFGVPPKWEPGMTVKVEWETGEASTDGFPGYDHWDEYLEWKKK >gi|289777623|gb|GG745508.1| GENE 1668 1791832 - 1792167 186 111 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2962 NR:ns ## KEGG: Kvar_2962 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 16 111 17 108 173 122 64.0 5e-27 MKSPFFFLVTAVLLLTGCNQPDEAESVSGGGGTIEAINHTHWAINHFSVNGQSGVDIIGP WQGGGGAGYFGVPSKWEPGMTVKIEWETGVGYSMDFPGFGDDKKVLEWEKK >gi|289777623|gb|GG745508.1| GENE 1669 1792263 - 1792793 255 176 aa, chain - ## HITS:1 COG:no KEGG:KPK_3058 NR:ns ## KEGG: KPK_3058 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 33 176 33 176 176 219 70.0 3e-56 MKSPFLFLVTAVLLLAGCNQPAESDSVSGGGGTIEAINHTHWAINHFSVNGQSGVDIIGP WQGGGGAGYFGVPSKWEPGMTVKIEWETGVGYSMDFPGFGDDKKLLEWKKNIKSQNREHS ATVSIPDYNGQKTCGIKIHFLPCDKVKVTTSCYDYGNPNYPIKDPIKMEEPEVCPK >gi|289777623|gb|GG745508.1| GENE 1670 1792818 - 1793594 365 258 aa, chain - ## HITS:1 COG:no KEGG:Spro_1791 NR:ns ## KEGG: Spro_1791 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 248 1 248 259 261 47.0 2e-68 MDFVSPWMDKIRTTCQRAEIDHVDVIIDQCAVNFSVLPALTTFSNPMMWQSLYQGLPEDI YPEDAPVLVRVDLSDAEHVQWLHNLAAEMMESAPLLICGSCWSFEQLADWLRDCVDTQHE GREGIFRFWDTRIFPFLFSHILDVEQQKQLLIPVLFWTWLDCGYQSSIRLGSGEIPESDK SVVQIEFTDSQFEKLMCVSDTSQFLRYESVPEGMFTNRQAEFTACYEAMLTATEQRIVFD DKRNDWVMAQVISNNSVT >gi|289777623|gb|GG745508.1| GENE 1671 1793598 - 1795976 1745 792 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 572 3 571 571 811 69.0 0 MSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRVEFTSADHAISKEMMLM KAASLTLQAPVAQGFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSH QNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRREQVMQYGEDDLRFITRLLGE VGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVE QQVSTRDYNYREATADMSAQVDVTRGETTTFGEAYHWGDNYLTAGNAHDRHPAPESGAFY ARLRHERYLNGQTRMQAITSCPTLCPGQVLKVTGGEEVAGEFADGVLITAMHSHARRDAD FAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTRENDTYGHIDKHGRYRVNMLFDR ARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEKRPRGEGF ELRTDSWGAIRAHKGIFISADGQAQARGQVLDMEPAVSLLKGALNQITEWGRITQIHHNF SPDADSLREFVNGASNLKEAALLMVAPKGVASVTPDTALMHSGKGLYLQSLGEVNIATAQ RHSVNASKAISLLSQQEGIRLVSAKGPLEVESHADTLSLTSLKDVTVQSTQGHLQLTAKN GITIACGGAYIQLTPEGEIKVHGPGLLSLKGQHNMEGPASQDFPLPELPSSVCKDCLKRA QEIAQGFVPREV >gi|289777623|gb|GG745508.1| GENE 1672 1795969 - 1798623 1329 884 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 24 850 15 788 815 516 36 1e-144 MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW DMDALWQDLLSWLDKQPRSVRHRPQLSDHTLRLMQEAWLIASLSGEAQIRSVHLLMALVE KQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQEAALAQPHGGDVEFVGRPAS GELNADGLNPALQNALDKFTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILV GEPGVGKTALVEGLALRIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEA VQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER DAALERRFQMVKVDEPDDETACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTGRQ LPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGERLA AIEQEEIRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQNALIAVQLGNPLL GLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAA KTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQLK GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI DFRNTVILMTANLGSDLLMQLLAEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRP LPAAALRAIVGIKLGQVSQRLACHYGITTTLSESLFDALTEACMLPDTGARNVDSLLNQQ ILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVMMAFDEGTISDE >gi|289777623|gb|GG745508.1| GENE 1673 1798888 - 1799379 748 163 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 296 90.0 9e-81 MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFL FTKEIDSSSPYLYKAVTTGQTLKSAEFKWYRINDAGQEVEYFNTKLENVKVVKVNPLMHD IKNPAYEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNERATA >gi|289777623|gb|GG745508.1| GENE 1674 1799384 - 1801090 1024 568 aa, chain - ## HITS:1 COG:YPO1469_2 KEGG:ns NR:ns ## COG: YPO1469_2 COG2885 # Protein_GI_number: 16121744 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 431 568 1 138 139 190 65.0 8e-48 MSPAQQRGLALWTSLLSALVCLLFLPVPRWGAWLILLVTLALIIGIWRIASRRTGRNVAS ILDPLPEGAYRQPVVLVCGDLPFVWPQASPVRVVKQGCWIRVEKTEELQQVARQVLSQRP EWGPQLSVLLCVCPQRHAQSDALTSALLALRWQLSQLRQQTGYAVPLALQGQVGSTMSPI LLWQAAMPGKAVKVWQPSCAPCSVPAWVSAGGAAALEQQVLMNSLMGWFEQHVHAVLTEE NTDLPPLTPAAVLWGLGPSLPGSLASSAWTTWLSRHSGLSRVAGWQPGESDTEDASALPE FILPQLPAGRGLTPRGRAWRAALAIFTLAAVAALLSSGWNNRQLLQRVGVDIARYERIAM DDYRPKASAVRVLREDAVLLDSWARNGVPLRLSLGLYHGEQIRLPLLEAIRGYVPPPPPP RPVQHVAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGE EKANQLLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL VPQVDACRLPDQPSASSQDDGASLHNGE >gi|289777623|gb|GG745508.1| GENE 1675 1801087 - 1801776 782 229 aa, chain - ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 13 228 13 228 228 241 57.0 1e-63 MNEPKRGNAASIDIDALLQNTWLQVISLRHGPQFRDEEGYTLWQRCVADVERVQHELKAS GLDDASCQHILTAQCALLDEAVKGRGVEDEACLQWYDIPLQGHFLGTMDAGDTLCERMRD VLREPAPDLAVVTCFQRVMLLGFVGSFRSLNDPERLKLINALSEHVPPFQCPSTAPVLVE NRAGLGISGWLASWPVRIGLSVMVVLVLWWGLNHWLDHLLLTLLPGTVK >gi|289777623|gb|GG745508.1| GENE 1676 1801773 - 1803116 1207 447 aa, chain - ## HITS:1 COG:YPO0976 KEGG:ns NR:ns ## COG: YPO0976 COG3522 # Protein_GI_number: 16121280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 446 1 449 450 581 65.0 1e-165 MMKTERPLWGRGIMVSPQHFQQQAAYAAWTAEVIARMGLNHPWGVMEATFEPEMLKLGRL QAHRLQVRFQDGTMIDTDNADALPSALSLDGADGEAVIVLALPLMQANGGNCLKPEEVAE RPVRFRQRWRDVRNQFGEDTRQIAVMQPELTLRFAHQDNSDYLTCPLVRLQRDSQGAWLI DETFLPPLLQIQGSRWLAAQLEQLLTQLRARLTRLMAMRRESNERMADFAVADVSLFWLL NALNSAEPVLGYFLRYQQSPPERLYPELARLAGSLLTFSLTHQANAVPIYQHDQLNAVFP PLFDLLSDLLEASLPSRVVAIALEHDARLHFWQARLHDARLREGADYYLSVRSSVPVARL QEQFPRQCKVGSPDHVKAIVNSSRTGVPLTPLRHVPAAIPLRLENQYFSLDVSHPLASEM LQSGTCMFYVPGMLGEPELELFAVLRT >gi|289777623|gb|GG745508.1| GENE 1677 1803126 - 1804670 2128 514 aa, chain - ## HITS:1 COG:YPO1466 KEGG:ns NR:ns ## COG: YPO1466 COG3517 # Protein_GI_number: 16121741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 514 3 516 516 860 79.0 0 MSVTTENAPVQGQTTLQENRAGEGVYASLFEKINLAPASHLGDINDFLDDAALSEAPAAE RLTAAMQVFMERIRQSGQRVEKLDKTLIDHHIAELDFQISRQLDAVMHHQEFQQVESLWR GLKQLVDNTDYRQNVKTEILDVAKDDLRQDFEDAPELIQSGLYWHTYTAEYDTPGGEPIG SVISAYEFDASPQDVALLRNISRVSAAAHMPFIGAVGPAFFLKETMEEVAAIKDIGNYFD RAEYIRWKSFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHEKYLWTS AAFSFASNMVKSFVNNGWCVQIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETRE FEFASLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAH YLKMIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDASVVVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >gi|289777623|gb|GG745508.1| GENE 1678 1804713 - 1805204 484 163 aa, chain - ## HITS:1 COG:YPO0978 KEGG:ns NR:ns ## COG: YPO0978 COG3516 # Protein_GI_number: 16121282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 163 3 164 166 216 74.0 1e-56 MADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLTIGDFSHGKENRPLSEREKINVNK NNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTDIKDFEPEQVARQIPQLRAMLAMR NLLRDLKSNLLDNATFRKELEAILKDPALSQELRDEMSALAPK >gi|289777623|gb|GG745508.1| GENE 1679 1805833 - 1806399 760 188 aa, chain + ## HITS:1 COG:PA4336 KEGG:ns NR:ns ## COG: PA4336 COG0693 # Protein_GI_number: 15599532 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 2 187 4 189 194 297 80.0 7e-81 MSKKILMLVGDYAEDYETMVPFQALQMIGHQVDAVCPDKAAGDYVMTAIHDFDGAQTYSE KPGHRFTLNANFAAVKAEDYDALVIPGGRAPEYLRLNEEVIKLVQAFDAARKPIAAVCHG PQLLAAAGILQGRTCSAYPACAPEVRLSGGHYADIGIDQAHVDGNLVTAPAWPAHPQWLA KFAALLAE >gi|289777623|gb|GG745508.1| GENE 1680 1806557 - 1807318 683 253 aa, chain - ## HITS:1 COG:RSc1730 KEGG:ns NR:ns ## COG: RSc1730 COG1028 # Protein_GI_number: 17546449 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 7 251 10 254 256 234 57.0 1e-61 MNNSAKIALVTGGSRGLGRATVEALAQRGVNVVLTYNAHFVEANEVVARVEAQGSRAIAL PFSAGETDTFDGFVSAFQEALAELGADRFHYLVNNAGNASGMGFLNATEAEFDALYRIHV KGVFFLSQKLLPLLADGGRIVNISSGLTRIVMANRAPYAIMKSAVETLTRYMAFELGSRA ITVNCVAPGAIATDFSGGVVRDNPQVAQAVANMTALGRPGVPEDIGPMIASLLSDDHRWV NAQRIEVSGGMRI >gi|289777623|gb|GG745508.1| GENE 1681 1807427 - 1808341 912 304 aa, chain + ## HITS:1 COG:mlr1983 KEGG:ns NR:ns ## COG: mlr1983 COG0583 # Protein_GI_number: 13471870 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 286 1 287 297 304 57.0 2e-82 MDKLDTLTLFVRIVERGSFSAAAADLGFSRPVATAAIKALEASLGARLLQRTTRHVRPTA EGSLYYQRCVAILAALEEANRSAGGSIAGIIRVDVAGNLARTLLLPALPQFLARYPAMTL QIGESERDVDLVREGVDCVIRGGHLPDSEMICRPFARLQEITCASPAYLARYGTPHTIEG LTGHVMIGFVSSRTQRTLPLSFTQDGRQSEVSLPCRLLTSDADVGAEAARLGFGLYQAPL PRLEADLASGALTEVLADFRPAPLPLSLLYPSNRQLSARVQVFIDWVTALMKPPLAQQAS GRLK >gi|289777623|gb|GG745508.1| GENE 1682 1808644 - 1808832 76 62 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2979 NR:ns ## KEGG: Kvar_2979 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 62 1 62 62 113 100.0 3e-24 MIEHIHFRCPCCHGSQYRTSQFDVTEKNPFGAKCIFCKSAMMTFDAIRPRHLGAQSTAQA QQ >gi|289777623|gb|GG745508.1| GENE 1683 1808886 - 1809329 355 147 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2980 NR:ns ## KEGG: Kvar_2980 # Name: not_defined # Def: anti-sigma regulatory factor, serine/threonine protein kinase # Organism: K.variicola # Pathway: not_defined # 1 147 10 156 156 283 99.0 1e-75 MMFPAELTSLSPLAEWLAQQMASLPVADEWRFALDLAACETATNIIRYALHEDRESRFGV EFRVADRRVTLRFTDAGETFPAERLALARGDEHFDVDPLAESGRGLRLILRAVDFFDVEM NAGKNITTLIKALPDPPVNYSTDKNGG >gi|289777623|gb|GG745508.1| GENE 1684 1809349 - 1809687 379 112 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2981 NR:ns ## KEGG: Kvar_2981 # Name: not_defined # Def: anti-sigma-factor antagonist # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 203 99.0 2e-51 MKIETERQASVTILTPAVRRLDASVAVAFKSAIAQEIGEAPGDLIVDFSDIDFIDSSGLG TLVSLMKMMNGKGEMTLCALNPGIRNMFTLTRMDRIFRICEDRTSALAQLNE >gi|289777623|gb|GG745508.1| GENE 1685 1809677 - 1810891 867 404 aa, chain - ## HITS:1 COG:alr1086_1 KEGG:ns NR:ns ## COG: alr1086_1 COG0784 # Protein_GI_number: 17228581 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Nostoc sp. PCC 7120 # 5 130 3 128 147 97 38.0 3e-20 MSAQHVLIVEDSLVYRRLLSRMLTQWGYIVSEAENGVAALAILENQPVSLVISDWEMPEM NGLTLCREVRRRQFGHYVYLILLTAREDPGDLTQGFAAGADDFLSKPVEQSELRARLHAG ARILSLEADLAARNTRLSEALRQIEQDLELAARIQQSVLPAHQLCYQGFFSDWIFLPSAW VSGDIFNVFPLGEHLGFYCVDVSGHGVGAAMMSLAVARQFLHGRAVERFLFSADNQPASP AEVVQILNGRFCSDEAEIVSYFTLIYGVIDLTTGEGKLCQAGHPTPFIVTVDGSVRSAGS GGAPVGLINHLSWADVSFSLAPGERLCLFSDGITECENRSGEQFGEARLQAWLQDSVTQP LPALLPRFARHLIHWRNGDAQETQAMADDVSLLIIERTGDSDEN >gi|289777623|gb|GG745508.1| GENE 1686 1810900 - 1811799 1028 299 aa, chain - ## HITS:1 COG:no KEGG:KPK_3078 NR:ns ## KEGG: KPK_3078 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 299 1 299 299 582 99.0 1e-165 MREKYMLACALWCAIAGAEGAEKNDAQPLRDKNGEPVQAGVFTSRWGRLFSGNDKVFSGA LSFSSGLKEQWMTIPNSSDSAEKKKKYNQTLNLSLQYSPYSFWFANVTSRLPVTDTSRYT ADFRYSFGYDDWHANTVSLVYSNYGDNHFWTSGSKRHTYFEQGAITLAYKFSLPKPMENT LLINKGDAIMCQVGYSWVPRYYDLESDDIRKNKNVLLGGCGYTFKQHFFIRATAFWYPDS SQQQPWNGDYSYSFGYAGYTQGSFSVQYANYAGTRYPGHDSGSGKFREGTISLIWFLPI >gi|289777623|gb|GG745508.1| GENE 1687 1811810 - 1813027 1126 405 aa, chain - ## HITS:1 COG:mlr8375 KEGG:ns NR:ns ## COG: mlr8375 COG4645 # Protein_GI_number: 13476916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 12 237 22 240 420 60 25.0 7e-09 MSQVASAISQKETDKSIAWRYSLAGERDLRIDFMRGIALVMMVVAHTEVMSIFNIFSWER FGLTTGAEGFVILSGFMLGMLNRVRLQKAVLLTVGWGLYLRAWKIYQVNIIIIVSFLLLR YFPFINAFEVTHFTDRFSGTSWSLYPLTPQIKETWFNIILYLQIGPHQTQILGLYIFLLL LSPLFLGMLQKGHVYPLLGVSLLIYGCWQRWPVRVTPCEFEFAFPLLAWQFIFVLGMCCG WYKAELISFARTPPGKVAVAALVFIALILAFVAQNHTNPFMPPALLMHVIPPAEFNAFYH TWAAKNGLGPVRILNDISLMVTIYLLLTWCWRPLNWLAGWFLIPLGQRSLYTFILHVYIV LAVSQLVTFDLWYQAWIVNTLIHAAALGVLWLMAKYRVAARWIPN >gi|289777623|gb|GG745508.1| GENE 1688 1813304 - 1815121 1759 605 aa, chain + ## HITS:1 COG:alr3757 KEGG:ns NR:ns ## COG: alr3757 COG1215 # Protein_GI_number: 17231249 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 152 599 280 687 693 189 28.0 1e-47 MDFYFSRFEHRRPPEPLSTPSWVRMIWQVFAVAALVLGANYIYWRWTASLNTDALWYAIP LVLAETLAWIGTVLFTINLWQEKDPPPGVPPTEINDCLRADEAVESRPIKVDLFIATYSE DVELVRLSIRDAMQMTYPGPLDYKVHVLDDGRRPEMKAVCEQEGANYITRQSNIGYKAGN LRNGLEHTDGDFLIICDADTRVFPTLLSHTLGYFRDPDVAWVQTPQWFFDLPEGEDLACW LRRKAGGAGYGVGWLAQKIVGPVTIGRDPFFNDPRMFYDVILRRRNWANAAFCCGAASVH RREAVMQAALRSYVWSVDAEIDRHTRDIRDPVTREALQDAMRPHVAFDTELTPYKFHVSE DIYTSILLHGDAARRWRSVMHPRIESKMLSPQDMLTWMIQRFKYAAGSLDILFHDNIFSR RRFKLSLPQTLMYATTFWSYLACVWNTVFLISPVIYLFTGIPPVSAWSTPFYLHFLPFFI VSELAFMFGTWGISAWDGRASYLSFFSMNLRALDTVLRGEQIKFHVTPKERQTGRFLYLV KPQIAIVLLTLTGLIWGGIQVARGEVDDPSGYVINIFWGAVNIAAMLPLIFAAMWTPPEE QEASR >gi|289777623|gb|GG745508.1| GENE 1689 1815118 - 1816449 1336 443 aa, chain + ## HITS:1 COG:no KEGG:KPK_3081 NR:ns ## KEGG: KPK_3081 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 443 1 443 443 829 99.0 0 MRIRDALLSARSYLTILIGFLLGFAIVVWVEKQMPARVESSGGMTLSQDFPPLPAPRELT FDEAIWARVAWQYYVNNTQPNGLANAHDDEPWLSLWSVGSYLFAVVAAEQLHIVTAAEGD ERIAAALFTLGQLPLNAQGLPAAQYHADTLQILGNPDSSAIGMGRLLTALQTLLWRYPQH AAAVRDLFNQWRVGALISNSPASQAAAPLHHWALAADEPRDSFGYRLYASHTLRLIDSAA GLAVTNPPQGQQMIDIDGIMVPDEGLRTPWGRQPSLISLPYLLTGLELGFDAQSAEIAWR IMQIQQRRHSLRVSKPPISTDYAEPAPDYASALADRQPQSAFAPRSATPEQTAITSTRTA FAWYALFRNSWSEALRQQVQTLQVPGKGWQRGLNLNRSVNDVVDGDTNAIVLESLAYISR GQMLCLACLSPAPLPSSSAGATP >gi|289777623|gb|GG745508.1| GENE 1690 1816446 - 1817993 1720 515 aa, chain + ## HITS:1 COG:no KEGG:KPK_3082 NR:ns ## KEGG: KPK_3082 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 515 1 515 515 1026 99.0 0 MKLTYFSRFPLLAGLMALWLSLSGAQAATGLPAAEYAPRSGELTPREMTIARNAWQYFVA NFQPTTGLVNAVNKYPSTTMWDSASYLAAMTAARELGIIDKAEFDRRMLKFLATLNKLDL FRNELPNKAYNTVSGQKVNYQNKPGEIGYSALDIGRMLVWLKVIKERYPEYSNSIDNVVL GWDFSHVVDPCGTLYGAYLENGQPKYVQEGRLGYEEYGAAGFQLWGFNTCQASRPQPYEL AEIYCVMVPYDSRDPRQTSQHNYVVSESYVLYGMEFGFDNPADRNDSPREYSHPWMKNFA DRVYQAQENRYAITGILTARSEHQLDKSPYFVYDTVFSDGFNWNTITDKGQFVPNSAAVS LKAAMGMWVLWNSPYTDRLLDAIENANEAGKGYYEGLYENGDGPINEFTANNNGIMLEAL LFKKEGKLLQFSSDNPKNRDFAPSLWDKKLVDLFEPNNGPRNRPFLSNTPAVKTWCEQTG TTQRTQPACQACQCAACKADEPVKLPPVTAQCLKP >gi|289777623|gb|GG745508.1| GENE 1691 1817978 - 1819372 1388 464 aa, chain + ## HITS:1 COG:no KEGG:KP1_2378 NR:ns ## KEGG: KP1_2378 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 464 1 464 464 872 96.0 0 MLKTLARWLTVAILLLLIALALFSREGAGWRWLTKGGWHTTARISSLTPQERTWAQIAWR YVENNTQPQTGLVNGSDKQPRATLWQMGDTLIALLAARELGLVKEAEFDARLTPLLGTLN RLTLTDGGSPGRLYSTQTATPVDFSGKPAASGWSAKDMARLMLALRLTAERAPQYGEYID KIILRWNFCPVIDKDGELWSASLQNGQRTIREELRLGDSEYAASAFRLWGFPAGKAFSPP ARNVIMYQRRLAVDDRDPRTTWQPVVLSTLPAMLPGLEFGWQPPGVPEEVQKAMRERAEG IWLSQKTRWTQDKVLTARADFSLTQAPWHVEDTVWGNGYAWNTLGDDGKYYPRLAQVTTK AVFVLWTLWETEYTDALMAVTTHLNDSQRGWFEGRVEATGDVNATLTLSTNAMVLEALFY KHNAGPLFKNGLADDNSYFAHRATDEFNPPRRCLPGERVIRSAP >gi|289777623|gb|GG745508.1| GENE 1692 1819369 - 1819803 443 144 aa, chain + ## HITS:1 COG:no KEGG:KP1_2377 NR:ns ## KEGG: KP1_2377 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 144 1 144 144 268 98.0 8e-71 MKFYRDLFEASLNRVVPEHDKQRFFQAFYSTFIHMSPETEQHFSQRSGEEGQQMIFKSFF AMLAVNGDLFVPDFLERLAREQSEEGLRLPPRFFALWREAMLKTVRASDPLCDEEILTAW AMAIAPGLEYLRRQAELHYQTVGQ >gi|289777623|gb|GG745508.1| GENE 1693 1819806 - 1822499 2374 897 aa, chain + ## HITS:1 COG:VC1349_3 KEGG:ns NR:ns ## COG: VC1349_3 COG0642 # Protein_GI_number: 15641361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Vibrio cholerae # 255 488 3 240 260 229 51.0 1e-59 MHAANRTDLNLLPSAVMIYDDRERLQAWNDKVALFYPTIAPWLAVGATIESLAEKFIDAG YNIDPGRQQTLREAIIRNCRQTNHCEVRQSGNRRIYIQHQRLADGGIVSLHTDITELDEA RRSRHQLHDDFLFTAESIQIGIWDWQVSHDNLQVNDTLLAMVGQSRAQWRYPLRFMLNLV HEDDRTTLQQAMIASQNEHMPVFECELRVQHPTQGWRWMLLSGQIVTLNMQQQAERVIGT LQDITRRKAAELLAIEAAKEAREANEAKSAFLANMSHEIRTPMNGILGMTQLCLDTPLTA EQREYLSLVMSSAQSLLHIINDILDFSRIESGKMQVDEEPLEIRPFIQSLIRPHMPAASE KGIELLVDISPAVPEVLIVDGPRLRQILTNLLGNALKFTHQGEVLLAIAPADDESRWRFR IRDTGIGIAPEKQKAIFEAFSQADSSTTRRYGGTGLGLTISARLVSLMGGELMVESQPGA GSEFAFTLPLEGLHAAASGSAPLSRFNNQRVLVVDDNSTNLRLLDTMLRQMGLMPSCVDN AGEALRRAAEGPPWPLILLDAQMPDMDGVSLALELSALPEARQSQIIMLSSMSRHFDANM LKRIGIAHYLHKPVAQRELHQVIAGILLPTPVVATAPAPVAEPVRDQTGLHILLAEDNLV NQKVARRLLEQLGHRCEVVSNGREALERWRAACWDLLLIDLQMPEMDGETAIRLLREETP ALGRQHQPAMAMTAHAMQGDRERCLAMGFDGYIAKPVSLEALREAIARVGAAEDSDLEEE KGLPDEAHLLKQCADDPELVEELLGLFAEGLDAAIIALTHAIDTNDRETWRRTAHKLRGE AVTLGFQRLAGVLQQMESRATSPGQTVPDDLRDALAEATTGCHRWLNRRSQEVLRDR >gi|289777623|gb|GG745508.1| GENE 1694 1822489 - 1824687 2037 732 aa, chain + ## HITS:1 COG:TM1624 KEGG:ns NR:ns ## COG: TM1624 COG3250 # Protein_GI_number: 15644372 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 90 648 79 659 785 145 25.0 2e-34 MIVKRLLLLMVCLPLAHAGSAPVTWSLAGQWRVHDANDSAFDGAQASDGDWRTLRVPANW YSAGYDHQGALWYRHQFTLHGLSPDAMATLVFDGVDYFAEVALNGKTLARHEGYFQRFPV DISGAVRRHNQLAVRVDSPYEDPQKIWPLHKTLMKGILNQHDTRPGGAWSVQGQDANSGG IWAPVKLHLSRGVTIDEVILRPDWQQGLEQPMLRAEIRYRAVTPGPVTLRLTATPDNFSG PRFHQAFAVTLEKTAGVLHVSLPMPSAKLWWPVGAGKPNLYRVRATLTDNRGMMDTAVTR TGLRKVEALADNQGWRINDRRLFIKGSNYIGSPWLSTMTRKKYRRDFRLVTAMNANAIRV HGHVAGRALYEVADEMGLMIWQDVPLQWGYDDSAAFAENAVRQTRAMMDQFGNSPAIIVW GGHNEPPWNSPWMEKRFPDWRKTLNQTLTQRVGDALAEDTSRIVHRFSAVEEHYWAGWYF GTLRDLLAPAKTGIITEFGAQALPRLSTLKTIIPAHLLWPKTTAADDPGWVRWKYHNFQP FQTFKFAGIPRGNNIQEMIENTQAYQARLVALAAESYRRQRYQPVTALFHFMFVETWPSI NWGVVDYLRQPKAGYYALQRAYQPILPSIEPVTASWRQGSPATVRLWAINDTWAACENCR LTWQVRQNGQMLAQGETSLTLPPDAGQMVRELTVTPAGPQPVTIVYRIDNRRGKHVGANQ HTEPVAAAQAGR >gi|289777623|gb|GG745508.1| GENE 1695 1824712 - 1824816 70 34 aa, chain - ## HITS:1 COG:STM1676 KEGG:ns NR:ns ## COG: STM1676 COG0656 # Protein_GI_number: 16765019 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 34 256 289 289 75 97.0 2e-14 MAQIGALDLGYVGEAVKHFNPEFVRGCLGVKIHD >gi|289777623|gb|GG745508.1| GENE 1696 1824859 - 1825581 815 240 aa, chain - ## HITS:1 COG:STM1676 KEGG:ns NR:ns ## COG: STM1676 COG0656 # Protein_GI_number: 16765019 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 240 1 240 289 456 90.0 1e-128 MEYSVLSNNLKMPMLGFGVFKVTDKAECKQSVLNAIRTGYRLIDTAAVYDNEDAVGEAVR EAIAEGLCTREALFITSKLWVQDMANTGMAKAGIAASLKKSGLEYFDLYLLHQAMGDYFS SWRALEDAYEAGKLKAIGVSNFYPHVLANFCETVRIRPMVNQVELHPYFAQPAALETMKH YHVQPEAWAPLGGGRHNPYQEAMLQGIADAHQKTIAQVILRWNVQRGVTVIPKSTRQERI >gi|289777623|gb|GG745508.1| GENE 1697 1825660 - 1826862 943 400 aa, chain - ## HITS:1 COG:ECs0311 KEGG:ns NR:ns ## COG: ECs0311 COG2814 # Protein_GI_number: 15829565 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 5 382 11 388 397 451 73.0 1e-126 MSGLHNTRAYWSGVLAMTLCVFLLIASEFMPVSLLTPIAGDLHITEGLAGQGIALSGALA VLTSLTISRLTGSLDRKWLLLGLTALMAASGLMIALASSFPVYMLGRALIGIVIGGFWSM SAATAIRLVPQRQVPRALAIFNGGNALATVVAAPLGSYLGATVGWRGAFLCLVPLAMVAF IWQCVSLPSMKSQRAPQRQGTVLRLFRRSTVSLGLLACGLFFMGQFTLFTYVRPFLETVT RVSSSGLPLILLAIGVAGFVGTLLISTVLHARFYPTLVAIPLVMAAIVGALLLAGHHTGA VTVLLSLWGLLATAAPTGWWTWIARTLPEDAEAGGGLMVAVIQLSIALGSTAGGLVFDSL GWHSTFALSGLLLLGAAGGTFLLSVKIRSSQRTAINELNA >gi|289777623|gb|GG745508.1| GENE 1698 1826928 - 1827986 1040 352 aa, chain - ## HITS:1 COG:ECs0310 KEGG:ns NR:ns ## COG: ECs0310 COG1073 # Protein_GI_number: 15829564 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 352 27 378 378 639 88.0 0 MSSAETTNPNAPVSMIEKWDKTFAESSKVDHRKVTFQNRYGITLVGDLYLPKDRGERKLA AIAVSGPFGAVKEQSSGLYAQTLAEQGFVTLSFDPSYTGESGGYPRNMASPDINTEDFSA AVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDMSRAMGHGVGDG KDRYTTADRRAVLQYLNAQRWKDAANGTSAPGGHDIYVDDKGNVSAADRILPETLPANPN PVLKEFFDYYRMPRGFHARSVNSTGAWNATMPLSFMNMPLLSYASEVTIPTLIVTGEQAH SRYFAEDAFKAIGSKEKALVIVPGANHVDLYDNVAGKIPFATFTQFFKTNLQ >gi|289777623|gb|GG745508.1| GENE 1699 1828237 - 1829121 846 294 aa, chain + ## HITS:1 COG:ECs0309 KEGG:ns NR:ns ## COG: ECs0309 COG0583 # Protein_GI_number: 15829563 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 294 7 300 300 511 85.0 1e-145 MAKRENYNDLYLFMQVVREGSFTAAAQRLGLAQSGVSRAVRELEERLGVQLLVRTTRRLS LTQAGEQLYHNVESGFDALDMGLATLAHYRQTPSGTVRINASQHAIDKVLLPKLAVFKHR YPDIRLELISESRFVDIIAERFDAGVRLGPEVGSGMIAVRISPDMEMAVVGTPEHFRRYG FPQTPADLVAHPCIAYQFGDGSLYAWELNVDGKKITHPPQGQWAFADSYMEAKAARLGLG LAYVPEELITDDLAQGTLIRVLQRYSQRLEGSFLYYPHRNVSPALRAVIDTLRM >gi|289777623|gb|GG745508.1| GENE 1700 1829453 - 1829839 399 128 aa, chain + ## HITS:1 COG:PA4183 KEGG:ns NR:ns ## COG: PA4183 COG0346 # Protein_GI_number: 15599378 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pseudomonas aeruginosa # 18 118 48 148 155 86 43.0 1e-17 MKVLNILVRRCVLITRFEETVSFYENLIAQKARLRFDYPEYDLKLAQVGSVLLIGGTEQS LAPFRATEATFLVNDITAWQKHLPSTGATIINPVKAVPTGWNMLVRHPDGMIAEYVEHHD KNLADEIF >gi|289777623|gb|GG745508.1| GENE 1701 1829984 - 1831771 1977 595 aa, chain - ## HITS:1 COG:no KEGG:KPK_3093 NR:ns ## KEGG: KPK_3093 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 595 1 595 595 1193 99.0 0 MGHPSVYPTSATLYDPQRAWNGYTLFQATEHGAVLVDMNGHVVREWPELHGFPNKILPGG AILGHSGERDPRYGMQDMLDLIQVDWEGNVTWKFDRYEQVSDPGNETRWMARAHHDYQRA GNPVGYYAPGLEPQVDGGNTLILAHTNLVNEAISDKLLLDDTIIEVDWQGNVVWEWRCSD HFHELGFDDAARTALYNNPNMRASGGGMGDWMHINSMSALGPNKWYDAGDVRFHPDNIIW DARESNIIAIIDKQSGKIVWQLGPDYSKPELKHIGWIIGQHHAHMIPQGLPGAGNILIFD NGGWAGYGAPNPASADGVKNAWRDYSRILEINPLTLDIEWRYSPYEADLPQPTDSYRFYS PYISNMQRLENGNTLINEGSNGRIFEVTRDHDIVWEYISPFWGKTLNNNMVYRAYRIPYA WIPQLAQPQETPIAAVDVRTLRQPGAAAAGPAQSVVRVAGVQPYSKSADALCVATDNDTL RRSPKLFRVAESAFRPISAASELEGERPMLLFVGAERCVHCRKLWQLLAHEKLSQRIAQF ETRYLDADLHQELASDLGVRGLPTLLLITSGQPISRAPTQYSVESLLNWLNSVSL >gi|289777623|gb|GG745508.1| GENE 1702 1831795 - 1832538 268 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 208 1 213 245 107 33 1e-21 MTSSTLVSFRHVRKSWQQVTALQNFNLDIAAGELVALVGSSGCGKSTLLRMLVGLESATQ GDICINGEPVTGVGKERGIVFQEPRLFPWLNVLDNVMLGLADEKLTRATKRQRALEMLAR VQLSEFASALPAQLSGGMAQRVAIARGLVARPQILMLDEPFGALDALTRHTLQQELLQIH QSAGTTTLLVTHDVEEAVALADRVVVLSPRPGRIREIVNLALPHPRQRDDDSFTAACRHI RNLITSV >gi|289777623|gb|GG745508.1| GENE 1703 1832535 - 1834103 1723 522 aa, chain - ## HITS:1 COG:PA0185 KEGG:ns NR:ns ## COG: PA0185 COG0600 # Protein_GI_number: 15595383 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Pseudomonas aeruginosa # 35 518 50 537 538 342 51.0 1e-93 MSQMILRTDAPGRPGFRLNGWPWLLPALLLLLWYIAAREGWMPAQILPAPSVVADTALSL LSGDLLAQWGFSLQHLALGLLLGAIAGTLLGALFGLVPAAAQRVEPLFYALAQIPTLGWI PLLMVLFGIDNGLKLAVIVKTTVVPMIINTQQAVASVPQTLSEAGRVMNFSRWQRLRWLV IPASLPGWFTGLRLALSQAWVSLIVVELLASSEGIGYLMVWGRQLFQLDIVFVTIAVVGL SGMLMEWAANRACSRLVFWPQPAAGRLAWKPQASWRALPLPIVLLALWQLASQWGWIDSV LFSSPLAVAARFVQGILSGELSAAMLASLGRAVVGGALGIAGGLLCGLLLALRPRAGQIF TPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMFFSTLQAVLQRNPQLDEV ARVLRLGEFARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSGVGIGSLMINAQ QLLDMPTILCGMVLVGITGAALDKAGRLLEMRATRWRQQEQL >gi|289777623|gb|GG745508.1| GENE 1704 1834326 - 1835393 1210 355 aa, chain + ## HITS:1 COG:PA0186 KEGG:ns NR:ns ## COG: PA0186 COG0715 # Protein_GI_number: 15595384 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 2 330 1 337 353 211 42.0 2e-54 MMKAFFSRSLLALVAVIGLAANAQAETLRTIRIGVPDQSAGSQPFIEGPVGMAFIRHQLE EVFKPQGVEVQWQFFKGAGPAVNEALANRQLDFVYLGDLAAIIGKASGLPTRLLLGSRGS ESWLAVTKASGIKTLADLKGKRVAVYRGTADQLAFDRALQTAGLNERSLQVINLDWNAGK AALAAGRVDAVWGGVSLLALRGDKIDVVVKSGDSGRQNTTQAGFLGTQTFIETWPQATQQ IVNVLVKNAAEISDPANRDAWSAEMAQQSQIPKALFLEALQPQDLNFTTSPRIDPFLTGS FSSSVEQAKSGRLIRSAFDVKQWVDGQFVEQALKTQQLENRWPPYDAKGEAKNAG >gi|289777623|gb|GG745508.1| GENE 1705 1835390 - 1836334 845 314 aa, chain - ## HITS:1 COG:PA2334 KEGG:ns NR:ns ## COG: PA2334 COG0583 # Protein_GI_number: 15597530 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 300 1 300 303 211 41.0 2e-54 MHLDFRQLRNFVALVEYGSFNRAAEAVCLSQSAFSRSIQALEQSVGHPLFDRQSKLPTLT LHGQKLLPYARRFQELNIELSSQLREADDAQNGEVAFGCGPAPGARLIPAAIGEFHRLLP QARVRFHIDNWLALHQALTSQHYPFVVADSWQAELDPQLRVQPLSPQRCFFVCHAEHPLA KQGTISIQEMLRYPFAAPYLPPGVRKVLATLSQQQDFTPAIQCDHIYALLSTLAQTHAIS FASEDGFALCQHSHRLVKLELSDLPDEWRLMQTRFAIISPVHAIQPPLVERLIEIILHTD RQHQLQLLAQEERD >gi|289777623|gb|GG745508.1| GENE 1706 1836506 - 1837393 909 295 aa, chain - ## HITS:1 COG:mlr7023 KEGG:ns NR:ns ## COG: mlr7023 COG0583 # Protein_GI_number: 13475849 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 283 1 281 301 117 30.0 4e-26 MTPKQLEVFISIVQLGSVTAAAAQLAMSQPSVSKSLALIEQQMGFSLFERYQGKMQPTAE ARALYKEALRVHQDRLRFERFVDHIRQYRVGQLRVCATPALALNILPLAVARFRQSFPDY GVVADMCLNNEIETAVEEGRYDLGFLVKPGYEPEENPLAICRGEMVCVLPGQHPLAQQTE IHWQDIPTRDLVYITTDARLVAMIAEEVPAFRQRQVAAVETNRYSMAINLVRHGNNSMTI VDSFSLQGVDTSGLAVRPFRHALPVSVVAVTDGHSTLSQPGEVFAKVMTELMAET >gi|289777623|gb|GG745508.1| GENE 1707 1837489 - 1838277 640 262 aa, chain + ## HITS:1 COG:BMEII0601 KEGG:ns NR:ns ## COG: BMEII0601 COG0834 # Protein_GI_number: 17988946 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Brucella melitensis # 25 257 21 250 257 70 26.0 2e-12 MKFFTSRFMSILLLIPGMFLTQSPAQAGEEINTILPDHVIRVGAVNAPPWYQKDLLTNQW TGLVPDVVQAIFKNTDIKIEYVDTQWGTAVAGLQSNRFDILGGFNNTPERAKAVDFTRPM GSHQMGVLTLEKETQKYQRWDTINTSQTRLSAIDGSAAVTLLQPQLDKAQWIIVPDSDNM QLQMESGRADAIVTNDIQMAQYIQKRHQGTMIIPLPVKEQATNMGLRKERPELQAWLNGR LEQLDKDGTLKKIWQKYTHPAK >gi|289777623|gb|GG745508.1| GENE 1708 1838283 - 1839074 244 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 247 270 514 563 98 27 9e-19 MNPQSLLPLLKIEALSKSFSGNKIIDDVSFAVRPSEVIGIIGRSGAGKSTLLRCLNMLEV PDSGHIWLGEEEIGFHGAQRKQVTQRTLARQRASMTMVFQHFNLWPHRSVLQNIIEGPVQ VLGLPRKKAIEKAMALLTRMGLQEKAGDFPVQLSGGQQQRVSIARALAMAPQVILFDEPT SALDPESVGEVLSVISELAASGTTMLVVTHEMRFALQVCSRLLLMDNGKLVEEASPQEIW SRPPDAPIRRFMTLSGVTAEELR >gi|289777623|gb|GG745508.1| GENE 1709 1839074 - 1839748 671 224 aa, chain + ## HITS:1 COG:DR1028 KEGG:ns NR:ns ## COG: DR1028 COG0765 # Protein_GI_number: 15806050 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Deinococcus radiodurans # 6 220 2 216 216 99 35.0 4e-21 MSYHWDFSILWQYHAVLLEGILTTFKIVLASVTLSILGGALLAPLRGASRAVIRLPTQGL IEIVRSIPPLVLIVWAYYCLPILFGLTLSSYLTCVLAISLYGSVFFAEIFRSGMQSVDHG LVEAGLSVGMSPLTVLVRITAPVAFLRILPAFVSQCVMSVKNSVLASYIATGEILYQGQR LSTATFRPLETLTFVALFFVATILPLSLLASYAERRIRSRYFKR >gi|289777623|gb|GG745508.1| GENE 1710 1839755 - 1841161 673 468 aa, chain + ## HITS:1 COG:mlr6217 KEGG:ns NR:ns ## COG: mlr6217 COG2079 # Protein_GI_number: 13475193 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Mesorhizobium loti # 3 429 1 401 446 106 28.0 1e-22 MTISATRQLVNFASTLSAPAIPAPVRRKIRLHLLDALACGWAASGHRVSEPMIRASRLFG GNGHCSVFGESGFSPLAAASANAAMINGLDHDDGVEIDGKGLGHPGATLVAAAMVALDLN PEPVAHDVLITTLAAGFEVNNRLIHAIQPSAERFSQVYGVAQHQSIGAAVVAGRLLGLNP EQLHHAVGLAAALTPLPSLHQYNWRQRPLLSLKDAVAPAAQAAVQAVIMAQQGLSGSLDV LDGEQGFWRMIGSDQFAPDRLTDELGSHWYAGYGSFKRYPACRWLACALECMEGIMQQTG WSVADLRTIEVQSFPRLVNDMMDYRPQTVTDAQFSLPWTLAAIAAGLAPGADWYTEDNMQ NPALLALADKVTATVTPEFTQRMNGPARQPGARVVVTNSRGECAVQERYKPLGSAERPLS DGEIIAKARRNLSGHKIKVNELLTSVMEEETARYYSSSADLMGFSLPA >gi|289777623|gb|GG745508.1| GENE 1711 1841199 - 1842815 2222 538 aa, chain - ## HITS:1 COG:mppA KEGG:ns NR:ns ## COG: mppA COG4166 # Protein_GI_number: 16129290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 538 8 544 544 944 86.0 0 MKYPVALTCGALWLASVSSLAWAADVPPGTVLAEKQLLVRHIKDEPASLDPAKAVGLPEI QVIRDLFEGLVNQDAKGNLVPGVATRWQSNDNRVWTFTLRDDARWSDGTPVTAADFVYSW QRLVDPKTTSPFAWFAALAGIANAQNIIDGKAAPETLGVTAVDAHTLRVQLDKPLPWFSN LTASFAFYPVQKANVDSGANWTRPGSLVGNGAYVLKDRVVNEKLVVVPNTHYWDNAKTVI QQVTFVPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNT QKGPTADERVRLALSMTIDRRVMAEKVLGTGEKPAWRFTPDVTAGFTPQPSQFESMSQAE LNAQAKALLAAAGYGPNRPLKLTLLYNTSENHQKIAIAVASMWKKNLGVEVKLQNQEWKT YIDSRNTGNFDVIRASWVGDYNEPSTFLSLLTSTHSGNISRFNDPAYDKILAQAAVENSA KARNDDYNAAEKIIMVKAPIAPIYQYTNGRLIKPWLKGYPITNPEDVAYSRTMYIVKH >gi|289777623|gb|GG745508.1| GENE 1712 1843001 - 1843708 826 235 aa, chain + ## HITS:1 COG:ECs1905 KEGG:ns NR:ns ## COG: ECs1905 COG2866 # Protein_GI_number: 15831159 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 234 21 254 262 391 80.0 1e-109 MSISRPRPQRGDFPPGTRQYGSSELGAPLLWFPAPQADSRSGLIIAGTHGDENSSIVTLS CALRTLKPELRRHHVVLTVNPDGCQLGLRANARGVDLNRNFPAANWKQGETVYRWNSAAE ERDVVLLTGEQPGSERETQALCQLIHQIHPAWVVSFHDPLACIEDPGHSPLGHWLADAFS LPLVGSVGYDTPGSFGSWCADIGLPCITAEFPPVSADEATERYLPAMTDLLRWQA >gi|289777623|gb|GG745508.1| GENE 1713 1843705 - 1844670 1200 321 aa, chain - ## HITS:1 COG:ECs1904 KEGG:ns NR:ns ## COG: ECs1904 COG4948 # Protein_GI_number: 15831158 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 321 15 335 335 488 78.0 1e-138 MRNVRVYEEAWPLHTPFVIARGSRSEAKVVVVELEEDGVKGVGECTPYPRYGESIASVMA QVMAIGEQLEAGLTREQLQRLLPAGAARNAVDCALWDLQARREGKTLSQLLGVALPNRVI TAQTVVIGTADQMAASAAALWQAGAQLLKVKLDDRLISERLIAIRQAAPEATLIVDANES WHSEGLAARCQLLADLGVAMLEQPLPADDDSALENFVHPLPICADESCHTRESLPRLRGR YEMVNIKLDKTGGLTEALALAGEAERQGYARMLGCMLCTSRGIAAALPLAPMARFADLDG PTWLAVDVEPALRFSTGVLHL >gi|289777623|gb|GG745508.1| GENE 1714 1844773 - 1845279 735 168 aa, chain + ## HITS:1 COG:STM1682 KEGG:ns NR:ns ## COG: STM1682 COG2077 # Protein_GI_number: 16765025 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 168 1 168 168 266 82.0 1e-71 MSQTVHFQGNPVSVQGTIPQAGAKAQPFTLVAKDLSDVALSQYAGKRKVLNIFPSIDTGV CAASVRKFNQLAAELDNTVVLCISADLPFAQSRFCGAEGLSNVVTLSTLRGASFLADYGV AIAAGPLAGLAARAVVVIDENDQVVYSQLVNEITEEPDYDAALAALKA >gi|289777623|gb|GG745508.1| GENE 1715 1845351 - 1846403 1219 350 aa, chain - ## HITS:1 COG:ECs0740 KEGG:ns NR:ns ## COG: ECs0740 COG3180 # Protein_GI_number: 15829994 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Escherichia coli O157:H7 # 4 350 15 361 363 328 61.0 8e-90 MASRRAIGHWLTLLLLSVLFSSLLLRLHLPAALLLGPLIAGLILSLRGVKLSIPRPCYLA AQAIVGCMIARAINPSVFGVLFNNWALVLAILLTTLAISGLTGWLLVRYSALPGATGAWG SSPGGASAMVVMAQEYGADVRLVALMQYLRVLFVVGAAALVVRYALGNEAQEMTQDIVWF PSLTLNFPFTLLLTALACWLGMRLRIPSGAMLLPMLLGALVQGSGWMMLELPEWLLAMAY AVLGWTVGLQFNKAIFLLALKTLPQIIASILGLILMCALMALALTHILQMDFMTAYLATS PGGLDTVAIIAAGTRADMSFIMALQTLRLFTILLTGPAMARAISRYAPRQ >gi|289777623|gb|GG745508.1| GENE 1716 1846504 - 1848045 1983 513 aa, chain - ## HITS:1 COG:STM1683 KEGG:ns NR:ns ## COG: STM1683 COG3283 # Protein_GI_number: 16765026 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Salmonella typhimurium LT2 # 1 513 1 513 513 879 85.0 0 MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIDIDPIGRIYLNFAELEFATFSSLMAEIRR IAGVTDVRTVSWMPSEREHLALSALLVAMPEPVLSLDTKGRVELANPASCLLFGQSQAKL RNHPVAQLIADFNVQRWLESSPQETHAEHVVVNGQNYLLEVTPVYLEGEHNERVLTGAVA MLRSTVRMGRQLQTMTSQDTSAFSQILAVGPKMRHVVEQARKLAMLSAPLLIVGDTGTGK DLLAHACHLASPRAGKPYLALNCGSIPEDAVESELFGDALQGKKGFFEQANGGSVLLDEI GEMSPRMQTKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGLFREDLYYRL NVLTLYLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLSADLSTVLTRYSWPGNVRQLK NAVYRALTQLEGFELRPQDILLPDHDVASLPVGEEAMEGSLDDITRRFERSVLTQLYRSY PSTRKLAKRLGVSHTAIANKLREYGLSQKKGDE >gi|289777623|gb|GG745508.1| GENE 1717 1848273 - 1849334 1410 353 aa, chain - ## HITS:1 COG:ECs1901 KEGG:ns NR:ns ## COG: ECs1901 COG3768 # Protein_GI_number: 15831155 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 558 84.0 1e-159 MSEPLKPRIDFDGPLQAEKIPPLKSARAFDTLEADNFAPARLVTGEEEEGAAEAVVESVL RPKRSLWRRMVSAGLAIFGVSVVAQGVQWTANAWQTQDWIALGGCVAGALIVGAGVGSVA TEWRRLWRLRQRAHERDEARDMLHSHAVGKAKAFCEKLAQQAGLDQSHPALQRWYAAIHE TQSDREVVSLYAQLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLIN RIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSARAAQGIG AGLLTARLGIKAMELCRPLPWIADDKPRLGDFRRELIGQLKETLQKSKTSPEK >gi|289777623|gb|GG745508.1| GENE 1718 1849331 - 1850728 1571 465 aa, chain - ## HITS:1 COG:ECs1900 KEGG:ns NR:ns ## COG: ECs1900 COG3106 # Protein_GI_number: 15831154 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 465 1 465 465 892 91.0 0 MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITALVNQLLNIHTGARLPLLSAARE ERLLGVKRVPQRDFGIPRFTYDEGLAQLYGQPPMWPTPTRGVSEIRLALRYRSNDSLLRH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLQGQRAEWSARWRQLCAGLDP LAPADEARLADIAAAWTDYLHACKREGLHFIQPGRFVLPGEMAGAPALQFFPWPDVDAIG EAKLAQADKHSNAGMLRERYKYYCERVVKGFYKEHFLRFDRQIVLVDCLQPLNSGPQAFN DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTVDQHSNMVSLLQQLIQD AWQNAAFEGISMDCLGLASIQATQSGLIEVNGEKIPALRGDRLSDGQPLTIYPGEVPARL PGQAFWQQQGFQFENFRPQVMDVDRPLPHIRLDAALEFLIGDKLR >gi|289777623|gb|GG745508.1| GENE 1719 1850831 - 1851049 389 72 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3008 NR:ns ## KEGG: Kvar_3008 # Name: not_defined # Def: phage shock protein PspD # Organism: K.variicola # Pathway: not_defined # 1 72 1 72 72 109 100.0 3e-23 MNSKWQRAGQQVKPGLKIVGKLALLTALRYGPAGVAGWAVKSVARRPLKMLLAVALEPLL SRLANRVTRGMK >gi|289777623|gb|GG745508.1| GENE 1720 1851078 - 1851437 556 119 aa, chain - ## HITS:1 COG:STM1688 KEGG:ns NR:ns ## COG: STM1688 COG1983 # Protein_GI_number: 16765031 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 119 1 119 119 176 70.0 1e-44 MAGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIIL TFALDPMPDSELYGHKAPSNGDLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL >gi|289777623|gb|GG745508.1| GENE 1721 1851437 - 1851661 433 74 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3010 NR:ns ## KEGG: Kvar_3010 # Name: not_defined # Def: phage shock protein B # Organism: K.variicola # Pathway: not_defined # 1 74 1 74 74 135 100.0 4e-31 MSMLFLAIPLTLFVLFVLPVWLWLHYNNRGANGSLTQNEQQRLLQLTDDAKRMRERIQAL EAILDAEHPNWRDK >gi|289777623|gb|GG745508.1| GENE 1722 1851717 - 1852385 1147 222 aa, chain - ## HITS:1 COG:STM1690 KEGG:ns NR:ns ## COG: STM1690 COG1842 # Protein_GI_number: 16765033 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Salmonella typhimurium LT2 # 1 222 1 222 222 249 91.0 3e-66 MGIFSRFADIVNANINSLLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR IEQAVAQQAEWQEKAELALRKEKEDLARAALIEKQKLTDLIAQLDHEVQLVDETLARMKK EIGELENKLSETRARQQALALRHQAASSSRDVRRQLDSGKLDEAMARFESFERRIDQMEA EAESHRFGKQQTLDQQFAELKADDEISEQLAALKAKMNQSNQ >gi|289777623|gb|GG745508.1| GENE 1723 1852553 - 1853527 1267 324 aa, chain + ## HITS:1 COG:ECs1880 KEGG:ns NR:ns ## COG: ECs1880 COG1221 # Protein_GI_number: 15831134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 324 6 330 330 536 84.0 1e-152 MAQYKDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIANRLHYLSSRWQGPF ISLNCAALNDNLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKL LRVIEYGELERVGGSQPLQVNVRLVCATNADLPRMVEEGHFRADLLDRLAFDVVQLPPLR ERQSDIMLLANQFAIQMCRELGLPLFPGFSERATATLLGYRWPGNIRELKNVVERSVYRH GDSEHELDAIILNPFRQTAASVPEAASGDELPALPLDLRDFQLQQEKRLLQRSLQQAKYH QKQAAELLGLTYHQLRALLKKHQL >gi|289777623|gb|GG745508.1| GENE 1724 1853518 - 1854909 2086 463 aa, chain - ## HITS:1 COG:lin2951 KEGG:ns NR:ns ## COG: lin2951 COG0477 # Protein_GI_number: 16802010 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 6 463 1 458 466 421 52.0 1e-117 MSTVTVSDTPFVGSDRLLVGIVLSVLTFWLFAQSVINVVPAMKSSLDISLETLTLAVSLS ALFSGCFVVASGGLADKFGRMRMTTLGLGLSIVGSAMLVVAQGPGLFLAGRVLQGLSAAC IMPATLALIKTWYEGRARQRAVSFWVIGSWGGSGLCSFVGGAIATGLGWRWIFVFSIAVA LLALFLLRGTPESRSASASQHKLDVGGLLSLIAALVLVNLFISKGHGWGWSSPLSLTMLV GALAAGAVFIRNGMRKGEAALIDFALFRNRAYGAAVLSNFLLNGAIGTMMIASIWLQQGH HLTPLESGMMTLGYLVTVLAMIRVGEKLLQRYGARLPMMAGPVLTAIAIGLISCTFLDKA LYIGVVFASNVLFGLGLGCYATPSTDTAVANAPENKIGVASGIYKMGSSLGGAMGIAVTA SLFALFLPLGMAHAAQYALWFNAVLCLGAMAVSALLLPRASHS >gi|289777623|gb|GG745508.1| GENE 1725 1854935 - 1856104 1441 389 aa, chain - ## HITS:1 COG:ECs4892 KEGG:ns NR:ns ## COG: ECs4892 COG1473 # Protein_GI_number: 15834146 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 13 389 10 388 388 436 56.0 1e-122 MTHPLLEALQVNEAQFIALRRQFHQQPEIGFEEHQTSNEVARLLGEWGYEVHRGLAGTGV VGTLRVGHGKKRLGLRADMDALPMQERSGKPWASQVDGRFHGCGHDGHTTTLLYAAEYLA RTRQFTGTLQLIFQPAEELLYGGRVMVEDGLFDRFPCDAIFGLHNMPGQPLGKIGLRDGA MMASSDTLHIEVKGVGGHGAVPEHTVDATLVACHITLALQSIVSRNITPFEPAVVTVGSI QAGHAPNIINDHVLMKLTVRTLNEQVRETVLQRIHDIAVAQAESFNATATLTHVNGSPVL RNDPAANAMVREVATSLFGAEQVGEVKPFMGSEDFAFMLEQHPHGSYFTIGAGDEPDRCM VHNPGYDFNDALLLTGAALWCGLAEHYLR >gi|289777623|gb|GG745508.1| GENE 1726 1856276 - 1858609 2308 777 aa, chain + ## HITS:1 COG:lin2953_2 KEGG:ns NR:ns ## COG: lin2953_2 COG3664 # Protein_GI_number: 16802012 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Listeria innocua # 419 761 86 433 437 167 30.0 5e-41 MEQHSGDFSVTVRDVRQLNQTEGDLLTLLWVLEGSVNLTEAEGVPQPLAADELAIVNRNR RWSLRSAGTNAVMILTLSASWLTRLDSAFFAVDYQITPRTRDAEDGLRRLMRQLLVSGLV KHPGHYRLEANRWLSEIALLLATRFSQPIASTPRRGAENWSRRIASVVARIDANYQRRLS LQEVAAAEFVSEAWLSRLFHKEVGVSFVQYLTALRLRHAADQLLTTRKPAQQIAREQGFA STRMMSDLFKRQHGVTPRQYREQHPRELARPRPPQADRWQLVAVDRLYARLNEPEPRDRE SPPLPINPPQTREINLHDRPARAAVLRHTRMVVTVRELDDLLREDVRRELEQLHRALPVY AIDINDPFLSSRLFGTGWDDPQMAGYACWYNLQQIFSWLAAMGWNVILHTGVTTRSDLLQ RFLLLAANHFPPATLNSWRFVWHWSPQASEATRQAAWRQQREVLHRLLPQPQLGIWHRFA PSDPGNDPLFHSPLLAEADFLACQADANEQLDLAQADSSRLASSEHYPLHKLRQIHSALR QRQLNLPLWLLSWNTLTGDTRDTNGRFFRGALLMDNLLGVADQVWLAGFWLNSGLQGEAR ANGKLDTSSLALHYLHGLPRPVYWVLWLWRRLRGEILFQDKNLLLLHHQGHYQLLLRNTV VYNPWLSSEAAFIQRFSQPYSVRLQGLEGGWRVKQHLFDQHHGALFPLVDAFRSRSGPDA EDYQWLMHRARPALSVEDARLDGHWLRVDSLESNALALYEFTPQRAPGEDPAPASNP >gi|289777623|gb|GG745508.1| GENE 1727 1858564 - 1859409 880 281 aa, chain - ## HITS:1 COG:mlr2155 KEGG:ns NR:ns ## COG: mlr2155 COG1396 # Protein_GI_number: 13471999 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 9 270 10 271 276 298 56.0 1e-80 MMNTSDNHALGDFLRARRQRLDPATFGFPAGRRRTPGLRREEVAQLASISPTWYTWLEQG RGGAPSREVLERIACGLRLTTPEREHLFILAFGHPPQTRLTVTDDMTPRLQRVLDAFTIP AIIRTASWDVIAWNAAAARVLTDYSQLPLAERNVLRRLFTRPEARCTLEDWQTVGQLIVN AFRADVTRMGATTETDQLIAELTQQSVEFARFWQSHDVAGHGEGYKRIHHPQMGPLDLEF TSFAVEGRPDLSLLVFNPATTESQRKIHGLLAGAGSSPGAR >gi|289777623|gb|GG745508.1| GENE 1728 1859517 - 1860422 1001 301 aa, chain + ## HITS:1 COG:mll2153 KEGG:ns NR:ns ## COG: mll2153 COG0451 # Protein_GI_number: 13471998 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Mesorhizobium loti # 1 294 1 294 294 302 57.0 4e-82 MRIFLTGASGFIGSRILPALQASGHQVIGLARSDTAAQTLKALGVEVHRGTLDAPDSLLA GVEGADAVIHTAFDHDFSRFAANCEKDRQAILTMGRALQGSARPLVITSGTLMGDDGSGV PARESFFNSGHPSPRTASELAGQQLLEAGVDVRVVRLPQVHDTVRQGLLTSYIERVVANG AVALRGEGSNRWSAAHVNDVARLYVSALLQGAAGERYHAVAEEGIALRDIAAVIARGLNL PLTHLDESQVDAWFGWFAPFTALDLRASSAWTRERLQWQPVGPGLLEDLRNMDYQKVTLS R >gi|289777623|gb|GG745508.1| GENE 1729 1860756 - 1862399 1938 547 aa, chain + ## HITS:1 COG:STM1692 KEGG:ns NR:ns ## COG: STM1692 COG4166 # Protein_GI_number: 16765035 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 547 1 549 549 938 86.0 0 MRLKLSSLLAAVSLLCGQAFAAPVLPDRADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDT LAAQIYDRLLDVDPYTYRLVPELAESWEVLDNGATYRFHLRRHVPFQRTAWFTPTRDFNA DDVIFTFGRIFNRDHPWHNVNGSSFPYFDSLQFADSVESVRKLDNQTVEFRLKRPDASFL WHLATHYASITSAEYAARLTQDDRQEQLDRQPVGTGPFQLSEYRSGQYIRLQRHPDYWRG KPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLTILRDDPRLRLTLRPGMNIAWL AFNTAKPPLDNPEVRHALALAINNQRLMQSIYYGTAETAASMLPRASWAYDNDAKITEYN PQEARARLKALGLENLTLKLWVPTSSQAWNPSPLKTAELIQADMAQIGVKVIIMPVEGRF QEARLMDMNHDLTLSGWATDSNDPDSFFRPLLSCAAIASQTNFAHWCNREFDDVLQKALL SQQLSSRMDAYKEAQRILARELPVLPLASSLRLQAYRYDMKGLVLSPFGNASFAGVSREK TEEVKKP >gi|289777623|gb|GG745508.1| GENE 1730 1862396 - 1863361 586 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 230 35 2e-58 MIIFTLRRLLLLLVTLFFLTFIGFSLSYFTPHAPLQGASLWNAWLFWFQGVLHWDFGVSS INGQLISEQLREVFPATMELCILAFGFALLIGIPVGMIAGVMRNKWPDTLISAVALVGFS IPVFWLALLLTLFFSLTLGWFPVSGRFDLLYEVKTVTGFALIDAWISDSPWRHEMIVSAA RHMVLPVLTLAVAPTTEVIRLMRISTSEVYDTNYVKAAATRGVSRRKILLRHVLHNALPP VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVIGALVIIVNV ISDILGAMANPLKHKEWYALR >gi|289777623|gb|GG745508.1| GENE 1731 1863566 - 1864237 152 223 aa, chain + ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 220 1 220 222 391 87.0 1e-109 MCGRFAQSQTREEYLAYLAEEADRDIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVH WGYAPGWWDKPPLINARVETAAASRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIHR ADGQPIFMAAIGSTPFERGDEAEGFLIVTAEADQGLVDIHDRRPLVLTSEAAREWMRQDI GGKEAEEIAADGVVAADKFIWHAVTRAEGNVKNQGPELIQDLT >gi|289777623|gb|GG745508.1| GENE 1732 1864537 - 1865202 -95 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|269967817|ref|ZP_06181862.1| ## NR: gi|269967817|ref|ZP_06181862.1| hypothetical protein VMC_32920 [Vibrio alginolyticus 40B] hypothetical protein VMC_32920 [Vibrio alginolyticus 40B] # 7 221 7 235 242 146 39.0 8e-34 MEQNTFVDRFFHSSLELTDFRKTGERDINTLFSFLNNLHSLQDRFREQFHSNISQHPEFK LLRILRNYHHHVGDVDEFRVYNVRNEFTLSHSEMIIIPLYIVAKAILNAKKRPNAEREIQ SISEFIDDFEYISANDSFFSERRPIINKGKTYYPGFDIYKCVYNITNIIADICRKIPELS QKKCIINLDDTYTSKNNIEKRNLLCHAGEVPFLTTEGYIIP >gi|289777623|gb|GG745508.1| GENE 1733 1865402 - 1865950 56 182 aa, chain + ## HITS:1 COG:no KEGG:Alide2_1559 NR:ns ## KEGG: Alide2_1559 # Name: not_defined # Def: hypothetical protein # Organism: A.denitrificans_K601 # Pathway: not_defined # 1 40 63 102 111 65 67.0 9e-10 MLNNGCDTTEFDDLVESFGFWYERGYSWSLGFYPTDNYDYRRLNGNYTSKLLDPRWLRKA ALVKAAAGHQCEDCGEQGRLEAHHCYYTTMSLGYEPWEYPLSAFRALCPTCHITRPIPEI RARAFLARLNQSQLSRLLDGLDNGFNRFEADSFIDFMRKASFHKTHMDEALLLLKKNTDI YD >gi|289777623|gb|GG745508.1| GENE 1734 1866115 - 1867302 317 395 aa, chain - ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 395 27 422 422 706 85.0 0 MVVLSNNDGCVIARSQEAKPFVKMGEPYFKQKDMFRWHGIIAFSSNYELYADMSNRVMTT LEELSPRCEIYSIDEAFCDLTGVRNCRDLTDFGREIRETVLRRTHLTVGVGIAQTKTLAK LANHAAKQWQRQTGGVVDLSNLERQRKLMALLPVDEVWGVGRRISKKLESMGIKTVLQLA DTDIRFIRKHFNVVLERTVRELRGEPCLGLEEFAPVKQEIVCSRSFGGRITEYHEMRQAI CSYASRAAEKLRGEHQYCRFISVFVKTSPFALNEPYYGNSASVKLLTPTQDSRDIITAAT KCLDVIWREGHRYQKAGVMLGDFYSQGVAQLNLFDDNAPRKNSEKLMEVLDHLNAKDGRG TLYFAGQGLQTAWQMKREMLSPRYTTRYCDLLKVR >gi|289777623|gb|GG745508.1| GENE 1735 1867382 - 1867864 -36 160 aa, chain - ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 22 158 1 137 139 208 75.0 4e-54 MICRSVKTTVYKNSINLSESIMQFCTPVELREIMLIPLYSDLVQCGFPSPAQDYVEQRID LNELLVNHPSATYFVKAAGDSMKDAGIGEGDLLVVDSSRTAVHGDIVIAAVDGEFTVKKL QLHPRVQLNPMNPAYSPIVVGSEDTLDVFGVVTYIIKSAG >gi|289777623|gb|GG745508.1| GENE 1736 1868853 - 1869173 122 106 aa, chain - ## HITS:1 COG:STM2772 KEGG:ns NR:ns ## COG: STM2772 COG1961 # Protein_GI_number: 16766084 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Salmonella typhimurium LT2 # 1 106 78 183 190 129 64.0 9e-31 MSELQARGVNFRSLTDSIDTSTPAGRFFFHVMSALAEMERELIVERTRAGLAAAREQGRV GGRRRVMTEEVVERCRRMLENGATRQQVADVIGVDVKTIYKYLPAT >gi|289777623|gb|GG745508.1| GENE 1737 1870133 - 1873090 126 985 aa, chain + ## HITS:1 COG:no KEGG:SLGD_02237 NR:ns ## KEGG: SLGD_02237 # Name: not_defined # Def: phage tail fiber # Organism: S.lugdunensis # Pathway: not_defined # 331 974 219 846 853 116 23.0 5e-24 MTLAAARADIANIPEGSTTYYRSPDDSALAIEVMNVGGTLQPTGRRMVSQKTVEGIIPSL VGPGMNLFNKGAVISGFYLFEGTGIPRENPEYCYSEKISAVAGGAYTSRLLTRVVTFFDG NDNYLSDISSVTAFTAPAGTAYFIVSVPLVNIDTYQVTFGAGEMPYRAYQAVLRDNIKGA PTNSYRTLGFTAGKNLFNPADAMPGVHLSSIGTILTDSDTSMTVSGYIPVDPTQPYCVDH PWKAATYYDAKGVFISRQYDSSYSTKPVNPLILPSNAAYMRIEIPAVVASVTMVEKNNKA TEFEPFKSKAPSEYSGVPVVFSEPVKALTETDLYGPGTNLFNKNKVVDGYINEFGAWFPV PAASGSVYITSEYIKVSAGDALSSSRSMRFINFYDSDKKHLSSVSAVNVVTVPASAAYVR ITTLLSNKDAMFVARVSVLPPVEDYVHVMRKALPDGFQIRIPGDIVDADQLDIDFVKHGL IVLGKNLFNRATVQSGYINESGTVISPDSRYVYSDYIPVEFSTSYALRVGARFITFYNAS KTFIRTDASSTQALTSFVTDLEIAYVRITFGSDRYVEAQVEKGDSATAFEEYAFYYLSEM PDGTPVKVKDAEVVSEAVPDVFGIERLRETHMRMTKMSFGDAVRLIVAMMGDSYTRTSPR YVLKVAQILWRYFNSAGTAATVPPIGYGWRSFGFDPNGDNTDVMGTSVVQSGFSCAYNTG HGPDISSVTASASGATISYSQNFALGFDSFLFAEGGSGVIQCQATGMADPVTIDLSAHPA GMQIIPLELPTTGSGTVTFTVITPPVTLYGANILNQTMSGVLVHKMGGSGSHTNHWVNAM DQRWLDAFDNLGADLVTIMLGTNDQGAQLSAATFRANILTMIDRVRSVRPTADILLICPA ENNRDGGNSIPMSIYAEVMYKIARDDRDVAFLNLQASFGQKHEDYAAGSDRPWMIGDGLH PDPSTGGYAIAGAIARALALPIFFK >gi|289777623|gb|GG745508.1| GENE 1738 1873362 - 1873511 98 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290512894|ref|ZP_06552259.1| ## NR: gi|290512894|ref|ZP_06552259.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 49 150 198 198 83 97.0 4e-15 MLGASAAGSSMLKGDIGFFGAWGNEFTAGDIATAIALGINIMTGRGQTV >gi|289777623|gb|GG745508.1| GENE 1739 1874271 - 1874411 113 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGNGTRILLNADGIITDWAKQHFEPVSSPLSAIANPKVAFDLLTAS >gi|289777623|gb|GG745508.1| GENE 1740 1875051 - 1875719 159 222 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVISAREVFDVFCEYGETTCHPAENGSYVICIRDTCNVHIDNYYGLHGWGFQGHHGIKGL YGNRNTFNRVDFHSFGYDVFFKDLTVKGRQINLQGGNEWSIEKLRLYITRTSGDAVEYFL NYAIGMRQDYASDCDGILNIDGVTVMWDRGLPAWYNTTRSFDLVRIIDTANSLDQGIDSK LPPTITIRNMCLISPASRPEDRMTILSSALLRPYVLSLPTTR Prediction of potential genes in microbial genomes Time: Mon Jul 11 05:26:06 2011 Seq name: gi|289776635|gb|GG745509.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.2, whole genome shotgun sequence Length of sequence - 1084691 bp Number of predicted genes - 1003, with homology - 990 Number of transcription units - 568, operones - 227 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 23 - 82 3.9 1 1 Tu 1 . + CDS 163 - 966 1134 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 1018 - 1047 2.1 - Term 886 - 926 6.0 2 2 Tu 1 . - CDS 1012 - 1917 707 ## COG0583 Transcriptional regulator - Prom 1959 - 2018 5.2 + Prom 1933 - 1992 3.7 3 3 Tu 1 . + CDS 2022 - 3212 1505 ## COG2814 Arabinose efflux permease + Term 3264 - 3300 1.6 4 4 Op 1 4/0.350 + CDS 3335 - 4111 677 ## COG3021 Uncharacterized protein conserved in bacteria 5 4 Op 2 . + CDS 4199 - 4969 953 ## COG0500 SAM-dependent methyltransferases + Term 4986 - 5018 3.0 - Term 4974 - 5006 2.2 6 5 Op 1 8/0.062 - CDS 5028 - 6395 548 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 7 5 Op 2 . - CDS 6467 - 7222 329 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 7364 - 7423 3.6 + Prom 7166 - 7225 3.2 8 6 Tu 1 . + CDS 7255 - 7977 781 ## COG0500 SAM-dependent methyltransferases 9 7 Tu 1 . - CDS 7974 - 8441 498 ## COG0328 Ribonuclease HI - Prom 8478 - 8537 1.7 + Prom 8401 - 8460 3.7 10 8 Tu 1 . + CDS 8497 - 9237 927 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 9455 - 9500 12.3 + TRNA 9371 - 9447 90.7 # Asp GTC 0 0 - Term 9447 - 9482 6.0 11 9 Tu 1 . - CDS 9507 - 10388 790 ## COG0583 Transcriptional regulator - Prom 10438 - 10497 4.2 + Prom 10397 - 10456 4.9 12 10 Tu 1 . + CDS 10492 - 11082 594 ## COG1280 Putative threonine efflux protein + Term 11084 - 11121 7.5 - Term 11072 - 11108 5.6 13 11 Tu 1 . - CDS 11111 - 12211 1459 ## COG0628 Predicted permease - Prom 12348 - 12407 3.7 14 12 Tu 1 . - CDS 12460 - 13251 839 ## COG0388 Predicted amidohydrolase - Prom 13313 - 13372 4.8 - Term 13348 - 13380 5.0 15 13 Tu 1 . - CDS 13407 - 15914 3143 ## COG1960 Acyl-CoA dehydrogenases - Prom 15937 - 15996 6.3 + Prom 15893 - 15952 5.8 16 14 Op 1 6/0.119 + CDS 16091 - 16672 874 ## COG0279 Phosphoheptose isomerase + Term 16695 - 16736 4.2 17 14 Op 2 . + CDS 16747 - 17514 1030 ## COG0121 Predicted glutamine amidotransferase + Term 17516 - 17563 1.2 - Term 17440 - 17474 3.1 18 15 Tu 1 . - CDS 17485 - 18225 986 ## COG3034 Uncharacterized protein conserved in bacteria - Prom 18308 - 18367 3.7 19 16 Op 1 7/0.088 + CDS 18751 - 19980 1398 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 20 16 Op 2 9/0.035 + CDS 19984 - 21222 1854 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 21 16 Op 3 9/0.035 + CDS 21215 - 22009 943 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 22 16 Op 4 9/0.035 + CDS 22002 - 22640 938 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 23 16 Op 5 7/0.088 + CDS 22644 - 23243 1081 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 24 16 Op 6 . + CDS 23256 - 24479 1601 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 25 16 Op 7 . + CDS 24482 - 24697 372 ## COG2991 Uncharacterized protein conserved in bacteria 26 17 Tu 1 . - CDS 25872 - 26732 1062 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 26761 - 26820 5.4 + Prom 26812 - 26871 3.0 27 18 Op 1 1/0.633 + CDS 26893 - 27948 1168 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 28 18 Op 2 . + CDS 27951 - 28403 376 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 29 19 Tu 1 . - CDS 28446 - 29903 1846 ## COG2195 Di- and tripeptidases - Prom 30018 - 30077 2.3 + Prom 29912 - 29971 4.5 30 20 Tu 1 . + CDS 30161 - 30619 662 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 30642 - 30678 9.0 + Prom 30641 - 30700 7.4 31 21 Op 1 . + CDS 30725 - 31969 1266 ## COG1073 Hydrolases of the alpha/beta superfamily 32 21 Op 2 . + CDS 32027 - 32425 495 ## KPK_4480 DNA-binding transcriptional regulator Crl + Term 32626 - 32667 -0.6 - Term 32310 - 32343 1.0 33 22 Op 1 1/0.633 - CDS 32511 - 33203 980 ## COG1802 Transcriptional regulators 34 22 Op 2 4/0.350 - CDS 33249 - 34649 1969 ## COG1113 Gamma-aminobutyrate permease and related permeases 35 23 Op 1 12/0.018 - CDS 34785 - 36068 1739 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 36 23 Op 2 3/0.442 - CDS 36081 - 37529 2142 ## COG1012 NAD-dependent aldehyde dehydrogenases 37 23 Op 3 . - CDS 37553 - 38821 1682 ## COG0579 Predicted dehydrogenase 38 23 Op 4 . - CDS 38849 - 39826 1138 ## Kvar_4129 hypothetical protein - Prom 39926 - 39985 6.4 39 24 Op 1 1/0.633 + CDS 40288 - 40545 377 ## COG3811 Uncharacterized protein conserved in bacteria 40 24 Op 2 . + CDS 40603 - 41352 1063 ## COG0500 SAM-dependent methyltransferases + Term 41576 - 41622 1.5 41 25 Tu 1 . - CDS 41393 - 42031 672 ## COG0625 Glutathione S-transferase - Prom 42054 - 42113 4.5 - Term 42189 - 42233 9.8 42 26 Op 1 . - CDS 42249 - 43511 1105 ## COG3775 Phosphotransferase system, galactitol-specific IIC component - Prom 43539 - 43598 2.0 - Term 43517 - 43569 5.8 43 26 Op 2 3/0.442 - CDS 43600 - 44595 912 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 44 26 Op 3 . - CDS 44612 - 45373 897 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 45 26 Op 4 . - CDS 45386 - 45565 173 ## KPK_4467 carbohydrate kinase, FGGY family 46 26 Op 5 . - CDS 45492 - 46922 1112 ## COG1070 Sugar (pentulose and hexulose) kinases 47 26 Op 6 . - CDS 46943 - 47494 371 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 48 26 Op 7 . - CDS 47509 - 48300 503 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - Prom 48320 - 48379 6.4 49 27 Tu 1 . - CDS 48817 - 49068 263 ## KP1_1115 Zn-finger protein - Prom 49104 - 49163 1.7 50 28 Op 1 30/0.000 - CDS 49246 - 50643 1104 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 51 28 Op 2 24/0.000 - CDS 50633 - 52168 686 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 52 28 Op 3 28/0.000 - CDS 52172 - 53191 837 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 53 28 Op 4 . - CDS 53203 - 54162 716 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - Term 54195 - 54223 -1.0 54 28 Op 5 . - CDS 54254 - 54448 70 ## 55 28 Op 6 . - CDS 54526 - 54741 103 ## gi|330005639|ref|ZP_08305317.1| hypothetical protein HMPREF9538_03001 56 29 Tu 1 . + CDS 54655 - 57180 1070 ## COG2909 ATP-dependent transcriptional regulator + Term 57344 - 57387 3.3 - Term 57120 - 57157 -0.4 57 30 Op 1 . - CDS 57352 - 58068 351 ## COG0518 GMP synthase - Glutamine amidotransferase domain 58 30 Op 2 . - CDS 58070 - 59764 1532 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) - Prom 59883 - 59942 6.4 59 31 Tu 1 . - CDS 60053 - 60400 204 ## KPK_4456 transcriptional regulator, AraC family - Prom 60436 - 60495 8.8 60 32 Tu 1 . - CDS 60618 - 61571 694 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 61654 - 61713 4.9 61 33 Op 1 4/0.350 + CDS 61681 - 62232 472 ## COG2128 Uncharacterized conserved protein 62 33 Op 2 1/0.633 + CDS 62266 - 63324 847 ## COG1960 Acyl-CoA dehydrogenases 63 33 Op 3 17/0.000 + CDS 63321 - 64121 225 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 64 33 Op 4 21/0.000 + CDS 64105 - 65295 973 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 65 33 Op 5 . + CDS 65292 - 66035 658 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Prom 66801 - 66860 3.6 66 34 Tu 1 . + CDS 66919 - 68121 136 ## COG0582 Integrase + Prom 68514 - 68573 2.2 67 35 Tu 1 . + CDS 68647 - 69204 28 ## E2348C_4606 hypothetical protein + Term 69364 - 69406 0.2 68 36 Tu 1 . + CDS 69955 - 70203 170 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 70224 - 70256 2.1 + Prom 70410 - 70469 2.9 69 37 Tu 1 . + CDS 70544 - 70906 178 ## KPK_2127 hypothetical protein + Term 70915 - 70952 4.6 + Prom 72054 - 72113 5.4 70 38 Tu 1 . + CDS 72236 - 72415 117 ## KPK_4418 hypothetical protein + Term 72533 - 72585 7.1 + Prom 72525 - 72584 1.9 71 39 Op 1 . + CDS 72607 - 73128 339 ## KPK_4417 hypothetical protein 72 39 Op 2 . + CDS 73121 - 73456 155 ## KPK_4416 hypothetical protein 73 39 Op 3 . + CDS 73457 - 73642 82 ## KPK_2124 hypothetical protein 74 39 Op 4 . + CDS 73639 - 73854 100 ## + Term 73911 - 73956 -1.0 - TRNA 74302 - 74377 91.5 # Thr CGT 0 0 75 40 Op 1 22/0.000 - CDS 74491 - 75744 1998 ## COG0014 Gamma-glutamyl phosphate reductase 76 40 Op 2 . - CDS 75755 - 76858 1452 ## COG0263 Glutamate 5-kinase - Prom 77019 - 77078 4.1 + Prom 77001 - 77060 5.7 77 41 Tu 1 . + CDS 77148 - 78200 1771 ## COG3203 Outer membrane protein (porin) + Term 78219 - 78251 5.0 - Term 78137 - 78177 3.8 78 42 Tu 1 . - CDS 78245 - 78811 253 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 78905 - 78964 3.1 79 43 Op 1 1/0.633 + CDS 79223 - 80092 1202 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 80097 - 80136 8.0 80 43 Op 2 . + CDS 80188 - 80853 887 ## COG0560 Phosphoserine phosphatase - Term 81142 - 81184 -0.9 81 44 Op 1 8/0.062 - CDS 81327 - 82211 1513 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 82 44 Op 2 8/0.062 - CDS 82208 - 83080 1293 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 83 44 Op 3 15/0.009 - CDS 83148 - 84086 1382 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 84 44 Op 4 . - CDS 84109 - 84951 979 ## COG3638 ABC-type phosphate/phosphonate transport system, ATPase component + Prom 85590 - 85649 7.7 85 45 Op 1 . + CDS 85795 - 86337 369 ## COG2771 DNA-binding HTH domain-containing proteins 86 45 Op 2 . + CDS 86412 - 86999 750 ## JW0287 conserved hypothetical protein + Term 87016 - 87048 5.4 87 46 Op 1 . + CDS 87059 - 87727 709 ## Kvar_4091 hypothetical protein 88 46 Op 2 . + CDS 87753 - 90278 2903 ## Kvar_4090 hypothetical protein 89 46 Op 3 . + CDS 90268 - 91911 1850 ## Kvar_4089 receptor 90 46 Op 4 . + CDS 91880 - 92590 695 ## Kvar_4088 hypothetical protein 91 47 Op 1 17/0.000 - CDS 92594 - 93283 1244 ## COG0765 ABC-type amino acid transport system, permease component 92 47 Op 2 34/0.000 - CDS 93273 - 94016 1098 ## COG0765 ABC-type amino acid transport system, permease component 93 47 Op 3 16/0.000 - CDS 94022 - 94840 598 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 94 47 Op 4 . - CDS 94842 - 95651 1242 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 95746 - 95805 4.2 + Prom 95937 - 95996 2.5 95 48 Tu 1 . + CDS 96095 - 96265 156 ## KPN_00300 DNA polymerase IV 96 49 Op 1 18/0.000 - CDS 96382 - 97077 272 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 97 49 Op 2 19/0.000 - CDS 97070 - 97852 245 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 98 49 Op 3 24/0.000 - CDS 97839 - 98888 1572 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 99 49 Op 4 20/0.000 - CDS 98888 - 99787 1397 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 100 49 Op 5 . - CDS 99807 - 100913 1542 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 101 50 Op 1 8/0.062 - CDS 101486 - 102265 950 ## COG4302 Ethanolamine ammonia-lyase, small subunit 102 50 Op 2 2/0.500 - CDS 102262 - 103650 1902 ## COG4303 Ethanolamine ammonia-lyase, large subunit 103 50 Op 3 . - CDS 103660 - 105039 2079 ## COG0531 Amino acid transporters - Prom 105267 - 105326 4.5 + Prom 105179 - 105238 3.8 104 51 Op 1 1/0.633 + CDS 105313 - 106722 1877 ## COG0833 Amino acid transporters 105 51 Op 2 . + CDS 106709 - 107641 1431 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) + Prom 107781 - 107840 2.4 106 52 Op 1 6/0.119 + CDS 107866 - 108828 1265 ## COG4521 ABC-type taurine transport system, periplasmic component 107 52 Op 2 7/0.088 + CDS 108840 - 109607 260 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 108 52 Op 3 5/0.235 + CDS 109604 - 110431 1350 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 109 52 Op 4 . + CDS 110428 - 111279 1194 ## COG2175 Probable taurine catabolism dioxygenase + Term 111320 - 111369 -0.1 110 53 Tu 1 . - CDS 111441 - 113159 2374 ## COG3176 Putative hemolysin - Prom 113204 - 113263 2.3 111 54 Tu 1 . - CDS 113340 - 113828 -19 ## COG1943 Transposase and inactivated derivatives - Prom 113864 - 113923 1.8 - Term 114014 - 114061 0.5 112 55 Tu 1 . - CDS 114087 - 115061 1329 ## COG0113 Delta-aminolevulinic acid dehydratase - Prom 115087 - 115146 3.4 113 56 Tu 1 . - CDS 115167 - 116327 1327 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Prom 116356 - 116415 4.1 + Prom 116322 - 116381 7.1 114 57 Tu 1 . + CDS 116526 - 117059 679 ## COG1335 Amidases related to nicotinamidase 115 58 Op 1 . + CDS 117177 - 118397 1874 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components 116 58 Op 2 . + CDS 118416 - 119522 1321 ## Kvar_4061 hypothetical protein + Term 119634 - 119662 -1.0 117 59 Tu 1 . - CDS 119519 - 119821 270 ## KPK_4367 hypothetical protein - Prom 119943 - 120002 2.9 118 60 Tu 1 . + CDS 120075 - 120278 379 ## KPK_4365 hypothetical protein 119 61 Tu 1 . - CDS 120310 - 121407 1564 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes - Prom 121553 - 121612 2.3 + Prom 121378 - 121437 3.3 120 62 Op 1 . + CDS 121507 - 122190 613 ## COG3921 Uncharacterized protein conserved in bacteria + Prom 122278 - 122337 2.0 121 62 Op 2 . + CDS 122360 - 123559 1501 ## COG0477 Permeases of the major facilitator superfamily + Term 123566 - 123607 8.0 + Prom 123616 - 123675 5.2 122 63 Op 1 . + CDS 123860 - 124120 299 ## KPN_00326 hypothetical protein + Prom 124126 - 124185 7.0 123 63 Op 2 . + CDS 124211 - 125641 1636 ## COG1785 Alkaline phosphatase + Term 125648 - 125687 7.2 124 64 Tu 1 . + CDS 125733 - 126050 237 ## KP1_1187 hypothetical protein + Term 126059 - 126091 5.0 - Term 126035 - 126090 13.0 125 65 Tu 1 . - CDS 126123 - 126932 1271 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 126963 - 127022 2.3 + Prom 126962 - 127021 3.6 126 66 Tu 1 . + CDS 127048 - 127506 543 ## COG1671 Uncharacterized protein conserved in bacteria - Term 127378 - 127424 2.6 127 67 Tu 1 . - CDS 127503 - 128198 862 ## COG3416 Uncharacterized protein conserved in bacteria - Prom 128333 - 128392 3.9 + Prom 128420 - 128479 6.4 128 68 Op 1 . + CDS 128526 - 129059 581 ## COG0703 Shikimate kinase 129 68 Op 2 . + CDS 129131 - 129322 164 ## Kvar_4048 hypothetical protein + Prom 129352 - 129411 4.4 130 69 Op 1 . + CDS 129588 - 130253 809 ## Kvar_4047 AroM family protein 131 69 Op 2 . + CDS 130268 - 130615 419 ## COG3123 Uncharacterized protein conserved in bacteria + Term 130624 - 130663 5.5 132 70 Tu 1 . - CDS 130688 - 131599 1350 ## COG2974 DNA recombination-dependent growth factor C - Prom 131630 - 131689 3.8 + Prom 131555 - 131614 3.7 133 71 Tu 1 . + CDS 131691 - 132605 290 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 134 72 Tu 1 . - CDS 132812 - 135043 2419 ## COG0419 ATPase involved in DNA repair - Prom 135124 - 135183 80.3 135 73 Op 1 28/0.000 - CDS 135185 - 135988 928 ## COG0419 ATPase involved in DNA repair 136 73 Op 2 . - CDS 135985 - 137190 1421 ## COG0420 DNA repair exonuclease + Prom 137291 - 137350 6.2 137 74 Op 1 40/0.000 + CDS 137373 - 138062 788 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 138 74 Op 2 4/0.350 + CDS 138084 - 139379 1495 ## COG0642 Signal transduction histidine kinase + Term 139408 - 139439 3.4 + Prom 139546 - 139605 4.2 139 75 Op 1 5/0.235 + CDS 139792 - 141111 1780 ## COG1114 Branched-chain amino acid permeases + Term 141136 - 141170 5.1 + Prom 141117 - 141176 5.2 140 75 Op 2 5/0.235 + CDS 141198 - 142571 1947 ## COG1113 Gamma-aminobutyrate permease and related permeases + Prom 142587 - 142646 2.9 141 76 Tu 1 . + CDS 142722 - 144539 2284 ## COG0366 Glycosidases 142 77 Tu 1 . - CDS 144536 - 145453 1129 ## COG0583 Transcriptional regulator - Prom 145583 - 145642 3.6 + Prom 145572 - 145631 7.1 143 78 Tu 1 . + CDS 145707 - 146348 953 ## COG1335 Amidases related to nicotinamidase 144 79 Op 1 . + CDS 146534 - 147079 597 ## COG3224 Uncharacterized protein conserved in bacteria 145 79 Op 2 . + CDS 147104 - 148972 2383 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold - Term 148817 - 148859 2.9 146 80 Op 1 4/0.350 - CDS 149032 - 149892 1028 ## COG0191 Fructose/tagatose bisphosphate aldolase 147 80 Op 2 . - CDS 149922 - 150884 854 ## COG0524 Sugar kinases, ribokinase family 148 80 Op 3 11/0.022 - CDS 150950 - 152341 1751 ## COG3037 Uncharacterized protein conserved in bacteria 149 80 Op 4 13/0.013 - CDS 152362 - 152649 297 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 150 80 Op 5 . - CDS 152655 - 153098 455 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 153274 - 153333 4.3 - Term 153393 - 153423 2.1 151 81 Tu 1 . - CDS 153445 - 154047 855 ## COG0450 Peroxiredoxin - Prom 154088 - 154147 4.0 152 82 Tu 1 . - CDS 154175 - 154756 897 ## COG3124 Uncharacterized protein conserved in bacteria - Prom 154915 - 154974 2.8 + Prom 154858 - 154917 3.4 153 83 Op 1 17/0.000 + CDS 155012 - 156076 1325 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) + Term 156081 - 156106 -0.5 154 83 Op 2 15/0.009 + CDS 156186 - 157313 1268 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 155 83 Op 3 25/0.000 + CDS 157336 - 157668 562 ## COG1862 Preprotein translocase subunit YajC 156 83 Op 4 31/0.000 + CDS 157728 - 159542 2432 ## COG0342 Preprotein translocase subunit SecD 157 83 Op 5 1/0.633 + CDS 159553 - 160524 1435 ## COG0341 Preprotein translocase subunit SecF + Term 160549 - 160583 5.0 + Prom 160556 - 160615 4.2 158 84 Op 1 1/0.633 + CDS 160663 - 161028 359 ## COG3324 Predicted enzyme related to lactoylglutathione lyase 159 84 Op 2 . + CDS 161053 - 161748 953 ## COG2378 Predicted transcriptional regulator + Term 161752 - 161783 3.5 - Term 161734 - 161777 6.5 160 85 Tu 1 . - CDS 161791 - 162675 1465 ## COG3248 Nucleoside-binding outer membrane protein - Prom 162830 - 162889 2.7 161 86 Tu 1 . - CDS 162976 - 163515 759 ## Kvar_4017 hypothetical protein - Prom 163630 - 163689 2.4 + Prom 163577 - 163636 4.1 162 87 Op 1 14/0.013 + CDS 163663 - 164112 701 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 163 87 Op 2 6/0.119 + CDS 164116 - 165219 1329 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 164 87 Op 3 17/0.000 + CDS 165307 - 165777 589 ## COG0054 Riboflavin synthase beta-chain 165 87 Op 4 11/0.022 + CDS 165797 - 166216 549 ## COG0781 Transcription termination factor + Term 166223 - 166272 8.1 166 88 Op 1 12/0.018 + CDS 166290 - 167261 1173 ## COG0611 Thiamine monophosphate kinase 167 88 Op 2 . + CDS 167254 - 167757 695 ## COG1267 Phosphatidylglycerophosphatase A and related proteins + Term 167932 - 167961 -0.5 168 89 Op 1 3/0.442 - CDS 167803 - 168777 1362 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 169 89 Op 2 13/0.013 - CDS 168838 - 170700 2529 ## COG1154 Deoxyxylulose-5-phosphate synthase 170 89 Op 3 22/0.000 - CDS 170719 - 171618 972 ## COG0142 Geranylgeranyl pyrophosphate synthase 171 89 Op 4 . - CDS 171620 - 171862 240 ## COG1722 Exonuclease VII small subunit - Prom 172109 - 172168 3.7 + Prom 171824 - 171883 3.9 172 90 Tu 1 . + CDS 172044 - 173492 1932 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase + Term 173517 - 173550 4.1 - Term 173504 - 173537 4.1 173 91 Op 1 . - CDS 173563 - 174039 376 ## COG3832 Uncharacterized conserved protein - Term 174050 - 174087 4.0 174 91 Op 2 4/0.350 - CDS 174090 - 174683 723 ## COG0693 Putative intracellular protease/amidase 175 91 Op 3 . - CDS 174646 - 175557 1048 ## COG1893 Ketopantoate reductase - Prom 175712 - 175771 2.9 + Prom 175690 - 175749 3.6 176 92 Tu 1 . + CDS 175775 - 176266 852 ## COG1666 Uncharacterized protein conserved in bacteria + Term 176288 - 176315 1.5 - Term 176276 - 176303 1.5 177 93 Tu 1 . - CDS 176309 - 177673 1857 ## COG0477 Permeases of the major facilitator superfamily - Prom 177694 - 177753 4.0 - Term 177786 - 177820 5.2 178 94 Tu 1 . - CDS 177833 - 179011 1586 ## COG0673 Predicted dehydrogenases and related proteins - Prom 179232 - 179291 3.3 179 95 Op 1 4/0.350 - CDS 179341 - 180705 1591 ## COG0477 Permeases of the major facilitator superfamily 180 95 Op 2 1/0.633 - CDS 180716 - 181534 930 ## COG1082 Sugar phosphate isomerases/epimerases 181 95 Op 3 . - CDS 181594 - 183285 1592 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 182 95 Op 4 . - CDS 183296 - 183616 479 ## Kvar_3996 NIPSNAP family containing protein 183 95 Op 5 . - CDS 183630 - 185306 1908 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 184 95 Op 6 . - CDS 185303 - 186124 972 ## COG0169 Shikimate 5-dehydrogenase - Prom 186247 - 186306 4.1 + Prom 186183 - 186242 3.0 185 96 Tu 1 . + CDS 186277 - 187035 826 ## COG1414 Transcriptional regulator - Term 187027 - 187058 2.4 186 97 Tu 1 . - CDS 187072 - 187404 494 ## KPN_00389 hypothetical protein - Prom 187560 - 187619 3.2 - Term 187593 - 187638 6.1 187 98 Op 1 7/0.088 - CDS 187655 - 188542 1166 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) 188 98 Op 2 16/0.000 - CDS 188554 - 188829 415 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 189 98 Op 3 20/0.000 - CDS 188883 - 189494 783 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 190 98 Op 4 25/0.000 - CDS 189484 - 191475 2339 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 191 98 Op 5 5/0.235 - CDS 191495 - 192403 832 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 - Term 192855 - 192899 12.5 192 99 Op 1 1/0.633 - CDS 192919 - 194394 1798 ## COG0477 Permeases of the major facilitator superfamily - Term 194398 - 194425 1.5 193 99 Op 2 . - CDS 194438 - 195016 661 ## COG3056 Uncharacterized lipoprotein - Prom 195055 - 195114 5.2 + Prom 195211 - 195270 3.0 194 100 Tu 1 . + CDS 195319 - 195636 352 ## COG0271 Stress-induced morphogen (activity unknown) + Term 195690 - 195726 4.5 + Prom 195783 - 195842 6.3 195 101 Tu 1 . + CDS 195982 - 197280 1737 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 197307 - 197353 8.4 + Prom 197298 - 197357 9.5 196 102 Op 1 24/0.000 + CDS 197591 - 198214 835 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Prom 198314 - 198373 4.3 197 102 Op 2 18/0.000 + CDS 198465 - 199739 1801 ## COG1219 ATP-dependent protease Clp, ATPase subunit + Term 199771 - 199803 3.1 + Prom 199791 - 199850 4.8 198 102 Op 3 16/0.000 + CDS 199923 - 202277 3011 ## COG0466 ATP-dependent Lon protease, bacterial type + Term 202309 - 202352 9.1 + Prom 202307 - 202366 3.6 199 102 Op 4 9/0.035 + CDS 202487 - 202759 235 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 202796 - 202827 2.5 + Prom 202795 - 202854 2.4 200 103 Tu 1 . + CDS 202974 - 204848 2700 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 204894 - 204923 3.5 + Prom 204911 - 204970 2.2 201 104 Op 1 . + CDS 204997 - 205365 475 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 205414 - 205447 1.3 202 104 Op 2 . + CDS 205477 - 205878 626 ## COG0824 Predicted thioesterase + Term 205926 - 205964 8.1 - Term 205954 - 205988 -0.3 203 105 Op 1 5/0.235 - CDS 205990 - 206691 943 ## COG0603 Predicted PP-loop superfamily ATPase - Term 206705 - 206733 2.3 204 105 Op 2 . - CDS 206758 - 208458 1648 ## COG4533 ABC-type uncharacterized transport system, periplasmic component - Prom 208495 - 208554 2.5 + Prom 208493 - 208552 2.4 205 106 Tu 1 . + CDS 208586 - 209404 794 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 209422 - 209457 5.1 206 107 Tu 1 . - CDS 209449 - 210501 1365 ## COG0031 Cysteine synthase - Prom 210576 - 210635 2.0 + Prom 210532 - 210591 3.4 207 108 Op 1 3/0.442 + CDS 210617 - 211075 472 ## COG1522 Transcriptional regulators 208 108 Op 2 35/0.000 + CDS 211118 - 212890 2080 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 209 108 Op 3 4/0.350 + CDS 212883 - 214661 228 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 214717 - 214751 -0.9 + Prom 214754 - 214813 3.1 210 109 Op 1 24/0.000 + CDS 214905 - 215243 507 ## COG0347 Nitrogen regulatory protein PII 211 109 Op 2 . + CDS 215277 - 216563 1556 ## COG0004 Ammonia permease + Term 216592 - 216622 3.0 - Term 216579 - 216609 3.0 212 110 Tu 1 . - CDS 216615 - 217478 1180 ## COG1946 Acyl-CoA thioesterase - Prom 217524 - 217583 4.3 + Prom 217520 - 217579 3.0 213 111 Tu 1 . + CDS 217700 - 218191 556 ## COG3126 Uncharacterized protein conserved in bacteria + Term 218199 - 218230 3.2 214 112 Op 1 . - CDS 218229 - 218540 288 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase - Term 218564 - 218606 3.6 215 112 Op 2 . - CDS 218609 - 219016 518 ## Kvar_3963 dTDP-glucose pyrophosphorylase + 5S_RRNA 219250 - 219363 96.0 # ECU82664 [D:55896..56009] # 4.5S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + Prom 219367 - 219426 8.2 216 113 Op 1 . + CDS 219664 - 219921 330 ## Kvar_3962 hypothetical protein 217 113 Op 2 . + CDS 219918 - 220133 253 ## Kvar_3961 hypothetical protein + Term 220235 - 220274 8.2 218 114 Tu 1 . - CDS 220268 - 221695 1346 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 221730 - 221789 4.8 + Prom 221665 - 221724 2.2 219 115 Tu 1 . + CDS 221784 - 222398 962 ## COG2364 Predicted membrane protein - Term 222392 - 222438 11.4 220 116 Tu 1 . - CDS 222443 - 223300 746 ## COG2215 ABC-type uncharacterized transport system, permease component - Prom 223344 - 223403 5.6 + Prom 223301 - 223360 3.5 221 117 Tu 1 . + CDS 223492 - 223737 424 ## COG1937 Uncharacterized protein conserved in bacteria + Term 223879 - 223928 0.6 222 118 Tu 1 . - CDS 223800 - 225359 1743 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Prom 225497 - 225556 2.9 - Term 225437 - 225478 9.2 223 119 Tu 1 . - CDS 225593 - 226702 1305 ## COG3839 ABC-type sugar transport systems, ATPase components + Prom 226884 - 226943 4.2 224 120 Op 1 19/0.000 + CDS 227059 - 228291 1809 ## COG2182 Maltose-binding periplasmic proteins/domains 225 120 Op 2 20/0.000 + CDS 228354 - 229661 1961 ## COG1175 ABC-type sugar transport systems, permease components 226 120 Op 3 2/0.500 + CDS 229672 - 230523 1250 ## COG3833 ABC-type maltose transport systems, permease component 227 120 Op 4 2/0.500 + CDS 230528 - 231730 1566 ## COG3867 Arabinogalactan endo-1,4-beta-galactosidase 228 120 Op 5 1/0.633 + CDS 231761 - 233818 2256 ## COG1874 Beta-galactosidase + Term 233834 - 233865 4.1 229 121 Tu 1 . + CDS 233883 - 234197 356 ## COG1264 Phosphotransferase system IIB components - Term 234192 - 234231 10.0 230 122 Tu 1 . - CDS 234334 - 235605 1964 ## COG4580 Maltoporin (phage lambda and maltose receptor) - Prom 235656 - 235715 3.8 + Prom 235605 - 235664 6.4 231 123 Tu 1 . + CDS 235876 - 236946 1220 ## COG1609 Transcriptional regulators + Prom 236976 - 237035 2.8 232 124 Op 1 6/0.119 + CDS 237063 - 237326 458 ## PROTEIN SUPPORTED gi|206579281|ref|YP_002240045.1| 50S ribosomal protein L31 type B 233 124 Op 2 . + CDS 237323 - 237466 244 ## PROTEIN SUPPORTED gi|152969009|ref|YP_001334118.1| 50S ribosomal protein L36 234 125 Tu 1 . - CDS 237463 - 238161 580 ## PROTEIN SUPPORTED gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein - Prom 238231 - 238290 1.9 + Prom 238182 - 238241 4.7 235 126 Tu 1 . + CDS 238262 - 239719 933 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 236 127 Tu 1 . - CDS 239688 - 240158 550 ## Kvar_3942 sigma factor YlaC - Prom 240228 - 240287 2.5 237 128 Tu 1 . - CDS 240295 - 240861 520 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 240887 - 240946 5.3 238 129 Op 1 . - CDS 241020 - 241238 205 ## KPN_00441 hemolysin expression-modulating protein 239 129 Op 2 . - CDS 241265 - 241639 276 ## Kvar_3939 biofilm formation regulator YbaJ - Prom 241758 - 241817 7.5 - Term 242074 - 242103 3.5 240 130 Op 1 27/0.000 - CDS 242122 - 245268 3869 ## COG0841 Cation/multidrug efflux pump 241 130 Op 2 . - CDS 245291 - 246376 1309 ## COG0845 Membrane-fusion protein - Prom 246564 - 246623 4.5 + Prom 246462 - 246521 3.3 242 131 Tu 1 . + CDS 246627 - 247277 642 ## COG1309 Transcriptional regulator + Prom 247326 - 247385 2.0 243 132 Tu 1 . + CDS 247407 - 250754 4261 ## COG3264 Small-conductance mechanosensitive channel + Term 250871 - 250909 -1.0 - Term 250750 - 250782 5.3 244 133 Op 1 . - CDS 250790 - 251689 1045 ## COG5464 Uncharacterized conserved protein 245 133 Op 2 . - CDS 251757 - 251930 192 ## Kvar_3933 hypothetical protein 246 133 Op 3 . - CDS 251943 - 252446 614 ## COG3923 Primosomal replication protein N'' - Prom 252530 - 252589 5.4 + Prom 252457 - 252516 1.8 247 134 Tu 1 . + CDS 252540 - 252917 443 ## COG2832 Uncharacterized protein conserved in bacteria + Term 252990 - 253032 -0.1 248 135 Op 1 8/0.062 + CDS 253068 - 253619 835 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 249 135 Op 2 . + CDS 253712 - 254881 1320 ## COG2812 DNA polymerase III, gamma/tau subunits + Prom 255183 - 255242 80.3 250 136 Op 1 30/0.000 + CDS 255291 - 255989 727 ## COG2812 DNA polymerase III, gamma/tau subunits 251 136 Op 2 23/0.000 + CDS 256047 - 256379 229 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 252 136 Op 3 4/0.350 + CDS 256379 - 256984 679 ## COG0353 Recombinational DNA repair protein (RecF pathway) 253 137 Tu 1 . + CDS 257097 - 258971 2994 ## COG0326 Molecular chaperone, HSP90 family + Term 259027 - 259071 6.8 + Prom 259096 - 259155 2.2 254 138 Tu 1 . + CDS 259194 - 259838 942 ## COG0563 Adenylate kinase and related kinases + Prom 259883 - 259942 3.3 255 139 Op 1 . + CDS 259967 - 260929 1195 ## COG0276 Protoheme ferro-lyase (ferrochelatase) + Term 260940 - 260979 5.1 256 139 Op 2 . + CDS 260993 - 262297 1820 ## COG0524 Sugar kinases, ribokinase family 257 140 Tu 1 . - CDS 262333 - 264009 516 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Prom 264062 - 264121 2.5 - Term 264189 - 264229 5.8 258 141 Tu 1 . - CDS 264235 - 265455 1515 ## COG0477 Permeases of the major facilitator superfamily + Prom 265639 - 265698 5.1 259 142 Tu 1 . + CDS 265725 - 267377 2303 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Term 267312 - 267340 -0.3 260 143 Tu 1 5/0.235 - CDS 267483 - 267962 692 ## COG2606 Uncharacterized conserved protein - Prom 268019 - 268078 3.5 261 144 Tu 1 1/0.633 - CDS 268164 - 268958 986 ## COG3735 Uncharacterized protein conserved in bacteria - Prom 268978 - 269037 1.7 - Term 269035 - 269072 7.0 262 145 Tu 1 . - CDS 269089 - 271590 3169 ## COG2217 Cation transport ATPase - Prom 271650 - 271709 3.1 + Prom 271556 - 271615 2.9 263 146 Tu 1 . + CDS 271697 - 272107 504 ## COG0789 Predicted transcriptional regulators + Term 272287 - 272331 5.6 - Term 271948 - 271984 2.1 264 147 Op 1 26/0.000 - CDS 272104 - 272562 602 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 265 147 Op 2 . - CDS 272559 - 273476 1378 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 273673 - 273732 4.3 + Prom 273532 - 273591 3.2 266 148 Op 1 4/0.350 + CDS 273617 - 274294 244 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 267 148 Op 2 . + CDS 274281 - 275063 1018 ## COG0390 ABC-type uncharacterized transport system, permease component 268 149 Op 1 3/0.442 - CDS 275160 - 276014 1312 ## COG3118 Thioredoxin domain-containing protein 269 149 Op 2 5/0.235 - CDS 276073 - 276843 230 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 270 149 Op 3 . - CDS 276872 - 277528 731 ## COG2755 Lysophospholipase L1 and related esterases 271 150 Op 1 11/0.022 + CDS 277466 - 278152 894 ## COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 272 150 Op 2 1/0.633 + CDS 278149 - 280563 2857 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component + Term 280584 - 280618 6.1 + Prom 280614 - 280673 2.3 273 151 Tu 1 . + CDS 280745 - 281890 1583 ## COG3203 Outer membrane protein (porin) 274 152 Tu 1 . - CDS 281998 - 283074 1288 ## COG2603 Predicted ATPase - Prom 283118 - 283177 2.6 275 153 Op 1 29/0.000 - CDS 283186 - 284211 1621 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 276 153 Op 2 . - CDS 284250 - 284759 563 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 277 153 Op 3 . - CDS 284856 - 285194 384 ## Kvar_3902 hypothetical protein 278 154 Op 1 8/0.062 - CDS 285302 - 286024 832 ## COG2908 Uncharacterized protein conserved in bacteria 279 154 Op 2 . - CDS 286028 - 286522 621 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 286646 - 286705 4.8 + Prom 286605 - 286664 2.4 280 155 Tu 1 . + CDS 286698 - 288083 1854 ## COG0215 Cysteinyl-tRNA synthetase + Term 288096 - 288125 3.5 - Term 288079 - 288119 6.3 281 156 Op 1 2/0.500 - CDS 288129 - 288341 381 ## COG2501 Uncharacterized conserved protein 282 156 Op 2 . - CDS 288343 - 289209 1140 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase - Prom 289249 - 289308 2.4 + TRNA 289549 - 289625 94.7 # Arg TCT 0 0 + Prom 290678 - 290737 6.2 283 157 Tu 1 . + CDS 290766 - 291167 350 ## COG2351 Transthyretin-like protein + Term 291187 - 291230 -0.5 - Term 291002 - 291045 -0.8 284 158 Tu 1 . - CDS 291246 - 291416 261 ## Kvar_3892 hypothetical protein + Prom 291679 - 291738 2.9 285 159 Tu 1 . + CDS 291927 - 293231 1391 ## COG0372 Citrate synthase + Term 293232 - 293287 12.8 286 160 Op 1 . - CDS 293283 - 293588 312 ## KPK_4103 hypothetical protein 287 160 Op 2 . - CDS 293566 - 294228 511 ## KPK_4102 transcriptional regulator, LuxR family - Prom 294411 - 294470 7.7 + Prom 294411 - 294470 10.2 288 161 Op 1 7/0.088 + CDS 294700 - 295260 416 ## COG3539 P pilus assembly protein, pilin FimA + Term 295271 - 295301 3.3 289 161 Op 2 10/0.027 + CDS 295319 - 296014 677 ## COG3121 P pilus assembly protein, chaperone PapD 290 161 Op 3 6/0.119 + CDS 296025 - 298460 2397 ## COG3188 P pilus assembly protein, porin PapC 291 161 Op 4 . + CDS 298462 - 299487 789 ## COG3539 P pilus assembly protein, pilin FimA 292 162 Tu 1 . - CDS 299510 - 300376 887 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 300626 - 300685 7.0 + Prom 300719 - 300778 4.2 293 163 Op 1 . + CDS 300887 - 301807 1083 ## COG1560 Lauroyl/myristoyl acyltransferase + Prom 301814 - 301873 2.1 294 163 Op 2 . + CDS 301908 - 302180 387 ## KPN_00497 hypothetical protein + Term 302218 - 302261 9.0 + Prom 302310 - 302369 8.5 295 164 Tu 1 . + CDS 302474 - 304054 1465 ## COG3710 DNA-binding winged-HTH domains + Term 304056 - 304109 3.6 + Prom 304219 - 304278 5.0 296 165 Op 1 10/0.027 + CDS 304420 - 305754 1418 ## COG0531 Amino acid transporters + Term 305776 - 305826 1.1 297 165 Op 2 4/0.350 + CDS 305837 - 307984 3131 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 307998 - 308031 5.4 298 166 Tu 1 3/0.442 + CDS 308045 - 309520 2223 ## COG3104 Dipeptide/tripeptide permease + Prom 309703 - 309762 2.2 299 167 Tu 1 . + CDS 309852 - 311369 2246 ## COG1190 Lysyl-tRNA synthetase (class II) 300 168 Tu 1 . + CDS 311527 - 311958 392 ## Kvar_3876 Tol-Pal system TolA + Term 312080 - 312116 1.6 301 169 Tu 1 . - CDS 312003 - 312428 543 ## Kvar_3875 hypothetical protein - Prom 312571 - 312630 6.0 + Prom 312715 - 312774 6.7 302 170 Op 1 16/0.000 + CDS 313000 - 313920 1293 ## COG1082 Sugar phosphate isomerases/epimerases 303 170 Op 2 9/0.035 + CDS 313917 - 315089 1531 ## COG0673 Predicted dehydrogenases and related proteins 304 170 Op 3 . + CDS 315099 - 316130 1310 ## COG0673 Predicted dehydrogenases and related proteins 305 171 Tu 1 . - CDS 316374 - 317381 1242 ## COG0673 Predicted dehydrogenases and related proteins + Prom 317383 - 317442 4.1 306 172 Tu 1 . + CDS 317483 - 318502 1134 ## COG1879 ABC-type sugar transport system, periplasmic component 307 173 Op 1 16/0.000 + CDS 318933 - 319856 1383 ## COG1879 ABC-type sugar transport system, periplasmic component 308 173 Op 2 21/0.000 + CDS 319889 - 321373 194 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 309 173 Op 3 . + CDS 321393 - 322415 1668 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 322492 - 322516 -1.0 310 174 Tu 1 . + CDS 322601 - 323242 491 ## Kvar_3866 hypothetical protein + Term 323352 - 323380 -1.0 311 175 Op 1 5/0.235 - CDS 323258 - 324265 1276 ## COG1609 Transcriptional regulators 312 175 Op 2 1/0.633 - CDS 324292 - 325692 1687 ## COG1621 Beta-fructosidases (levanase/invertase) 313 175 Op 3 . - CDS 325692 - 327062 1986 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 314 176 Tu 1 . - CDS 327167 - 328684 2186 ## COG4580 Maltoporin (phage lambda and maltose receptor) - Prom 328743 - 328802 5.7 - Term 328814 - 328844 2.6 315 177 Tu 1 . - CDS 328851 - 329774 1148 ## COG0524 Sugar kinases, ribokinase family - Prom 329794 - 329853 3.1 + Prom 329748 - 329807 3.8 316 178 Tu 1 . + CDS 329887 - 330654 667 ## Kvar_3860 Crp/Fnr family transcriptional regulator 317 179 Op 1 . + CDS 330789 - 331133 370 ## Kvar_3859 hypothetical protein 318 179 Op 2 . + CDS 331133 - 332275 1629 ## COG1566 Multidrug resistance efflux pump - Term 332264 - 332315 12.7 319 180 Op 1 35/0.000 - CDS 332316 - 333113 930 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 320 180 Op 2 33/0.000 - CDS 333110 - 334192 1726 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 321 180 Op 3 . - CDS 334199 - 335317 1454 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 335383 - 335442 4.7 + Prom 335365 - 335424 5.6 322 181 Op 1 . + CDS 335589 - 335978 512 ## KP1_1443 hypothetical protein + Term 336002 - 336029 -0.1 323 181 Op 2 . + CDS 336147 - 336602 494 ## Kvar_3853 hypothetical protein + Term 336798 - 336846 2.5 324 182 Tu 1 . - CDS 336667 - 337254 705 ## Kvar_3852 lipoprotein - Prom 337316 - 337375 8.0 + Prom 337310 - 337369 6.3 325 183 Op 1 3/0.442 + CDS 337489 - 338667 1586 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 326 183 Op 2 . + CDS 338687 - 339463 1068 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 327 184 Tu 1 . + CDS 339591 - 340544 1275 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 328 185 Op 1 . - CDS 341531 - 342322 1155 ## KPK_4057 MoaF protein 329 185 Op 2 . - CDS 342348 - 343124 835 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 343148 - 343207 5.4 + Prom 343370 - 343429 5.8 330 186 Tu 1 . + CDS 343633 - 344316 668 ## COG2771 DNA-binding HTH domain-containing proteins + Term 344339 - 344369 3.0 331 187 Op 1 . + CDS 344433 - 345605 1452 ## Kvar_3845 major facilitator superfamily MFS_1 332 187 Op 2 . + CDS 345622 - 346737 1510 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Term 346765 - 346791 1.0 333 188 Op 1 6/0.119 + CDS 346836 - 347123 80 ## COG4680 Uncharacterized protein conserved in bacteria 334 188 Op 2 . + CDS 347127 - 347486 534 ## COG5499 Predicted transcription regulator containing HTH domain + Term 347566 - 347620 3.1 335 189 Op 1 . - CDS 347503 - 348045 604 ## KPK_4051 hypothetical protein 336 189 Op 2 1/0.633 - CDS 348023 - 349522 2286 ## COG0531 Amino acid transporters - Term 349671 - 349712 5.1 337 190 Op 1 3/0.442 - CDS 349962 - 350327 558 ## COG3450 Predicted enzyme of the cupin superfamily 338 190 Op 2 . - CDS 350341 - 351642 1876 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 351768 - 351827 2.9 + Prom 351533 - 351592 1.6 339 191 Tu 1 . + CDS 351802 - 353286 1982 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 353367 - 353408 8.7 + Prom 353463 - 353522 3.4 340 192 Op 1 . + CDS 353684 - 354766 1314 ## COG3391 Uncharacterized conserved protein + Term 354774 - 354804 2.1 341 192 Op 2 . + CDS 354814 - 357024 2827 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 357045 - 357104 2.4 342 193 Tu 1 . + CDS 357131 - 358507 2274 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 358508 - 358555 2.1 + Prom 358580 - 358639 5.7 343 194 Op 1 4/0.350 + CDS 358659 - 359900 1899 ## COG0477 Permeases of the major facilitator superfamily 344 194 Op 2 16/0.000 + CDS 359917 - 360939 1134 ## COG1082 Sugar phosphate isomerases/epimerases 345 194 Op 3 . + CDS 360941 - 362098 1217 ## COG0673 Predicted dehydrogenases and related proteins + Term 362240 - 362273 4.7 346 195 Tu 1 . - CDS 362118 - 362534 534 ## KP1_1473 hypothetical protein - Prom 362715 - 362774 2.1 + Prom 362674 - 362733 2.5 347 196 Tu 1 . + CDS 362768 - 363748 1353 ## COG1609 Transcriptional regulators - Term 363662 - 363705 2.1 348 197 Op 1 3/0.442 - CDS 363751 - 364995 1501 ## COG0668 Small-conductance mechanosensitive channel 349 197 Op 2 . - CDS 365066 - 366493 2116 ## COG0477 Permeases of the major facilitator superfamily - Prom 366534 - 366593 2.6 + Prom 366520 - 366579 3.0 350 198 Tu 1 . + CDS 366611 - 367468 997 ## COG1396 Predicted transcriptional regulators 351 199 Op 1 . + CDS 368294 - 369328 1500 ## KPN_00545 putative permease 352 199 Op 2 . + CDS 369425 - 372154 2120 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 353 200 Op 1 3/0.442 - CDS 372207 - 373193 1117 ## COG2222 Predicted phosphosugar isomerases 354 200 Op 2 3/0.442 - CDS 373258 - 374319 941 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 355 200 Op 3 13/0.013 - CDS 374337 - 375191 1087 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 356 200 Op 4 13/0.013 - CDS 375194 - 375937 723 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 357 200 Op 5 9/0.035 - CDS 375952 - 376422 447 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 358 200 Op 6 1/0.633 - CDS 376415 - 376849 375 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 376907 - 376966 8.3 359 201 Tu 1 . - CDS 377097 - 377750 1040 ## COG0778 Nitroreductase - Prom 377793 - 377852 2.7 360 202 Op 1 1/0.633 - CDS 377870 - 378238 511 ## COG2315 Uncharacterized protein conserved in bacteria 361 202 Op 2 . - CDS 378238 - 378819 820 ## COG1309 Transcriptional regulator - Prom 378931 - 378990 1.9 + Prom 378890 - 378949 3.1 362 203 Op 1 . + CDS 379047 - 380114 1182 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 363 203 Op 2 . + CDS 380145 - 380486 578 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 380604 - 380653 6.8 364 204 Tu 1 . - CDS 380503 - 380751 385 ## Kvar_3817 hypothetical protein - Prom 380837 - 380896 6.5 365 205 Tu 1 . + CDS 381253 - 383976 3733 ## COG0474 Cation transport ATPase + Term 383984 - 384019 8.2 + Prom 384069 - 384128 80.3 366 206 Op 1 27/0.000 + CDS 384230 - 385231 1085 ## COG0845 Membrane-fusion protein 367 206 Op 2 . + CDS 385245 - 388337 4101 ## COG0841 Cation/multidrug efflux pump + Term 388492 - 388525 3.7 368 207 Op 1 . - CDS 388925 - 389644 1005 ## COG3698 Predicted periplasmic protein 369 207 Op 2 . - CDS 389692 - 390807 1292 ## COG2170 Uncharacterized conserved protein - Prom 390988 - 391047 6.7 + Prom 390972 - 391031 6.0 370 208 Op 1 38/0.000 + CDS 391133 - 392800 2184 ## COG0747 ABC-type dipeptide transport system, periplasmic component 371 208 Op 2 49/0.000 + CDS 392819 - 393772 1273 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 372 208 Op 3 3/0.442 + CDS 393775 - 394668 1377 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 373 208 Op 4 44/0.000 + CDS 394672 - 395709 1411 ## COG4608 ABC-type oligopeptide transport system, ATPase component 374 208 Op 5 . + CDS 395699 - 396709 1168 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component + Prom 396725 - 396784 1.9 375 208 Op 6 . + CDS 396807 - 398075 1838 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 376 209 Tu 1 . - CDS 398179 - 399087 959 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 399113 - 399172 2.0 377 210 Tu 1 . + CDS 399211 - 400545 1412 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 400679 - 400734 1.5 378 211 Tu 1 . - CDS 400542 - 402005 1914 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 401998 - 402057 1.5 379 212 Op 1 31/0.000 + CDS 402247 - 403098 994 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 403105 - 403134 3.5 380 212 Op 2 17/0.000 + CDS 403146 - 403787 1002 ## COG0765 ABC-type amino acid transport system, permease component 381 212 Op 3 . + CDS 403802 - 404467 779 ## COG0765 ABC-type amino acid transport system, permease component 382 212 Op 4 . + CDS 404460 - 405221 239 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Term 405223 - 405280 15.1 - Term 405027 - 405055 1.0 383 213 Tu 1 . - CDS 405275 - 406039 1135 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 406060 - 406119 2.7 384 214 Tu 1 . + CDS 406220 - 407557 1812 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Term 408778 - 408808 1.0 385 215 Op 1 17/0.000 - CDS 408812 - 409516 420 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 386 215 Op 2 44/0.000 - CDS 409503 - 410339 324 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 387 215 Op 3 49/0.000 - CDS 410332 - 411165 1351 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 388 215 Op 4 38/0.000 - CDS 411165 - 412187 349 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Term 412206 - 412247 5.7 389 215 Op 5 . - CDS 412308 - 413876 2460 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 413953 - 414012 4.3 + Prom 413854 - 413913 4.6 390 216 Tu 1 . + CDS 414082 - 414777 445 ## PROTEIN SUPPORTED gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein + Term 414956 - 414995 4.1 391 217 Op 1 10/0.027 - CDS 414898 - 416562 2122 ## COG2303 Choline dehydrogenase and related flavoproteins 392 217 Op 2 6/0.119 - CDS 416576 - 418048 1795 ## COG1012 NAD-dependent aldehyde dehydrogenases 393 217 Op 3 . - CDS 418062 - 418667 664 ## COG1309 Transcriptional regulator - Prom 418737 - 418796 5.5 + Prom 418667 - 418726 3.0 394 218 Tu 1 . + CDS 418778 - 420811 2949 ## COG1292 Choline-glycine betaine transporter 395 219 Tu 1 . - CDS 420858 - 421304 646 ## KP1_1532 C-lysozyme inhibitor - Prom 421462 - 421521 2.4 + Prom 421299 - 421358 3.8 396 220 Tu 1 . + CDS 421529 - 422785 1479 ## COG0668 Small-conductance mechanosensitive channel 397 221 Tu 1 . - CDS 422782 - 423675 1206 ## COG0583 Transcriptional regulator - Prom 423721 - 423780 1.6 + Prom 423840 - 423899 1.5 398 222 Tu 1 . + CDS 423929 - 424534 713 ## COG0625 Glutathione S-transferase + Term 424646 - 424690 2.1 399 223 Tu 1 10/0.027 - CDS 424587 - 425372 1048 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 400 224 Op 1 3/0.442 - CDS 425574 - 426371 198 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 401 224 Op 2 21/0.000 - CDS 426432 - 427499 1882 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 402 224 Op 3 4/0.350 - CDS 427517 - 429061 175 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 403 224 Op 4 3/0.442 - CDS 429063 - 429683 835 ## COG5618 Predicted periplasmic lipoprotein 404 224 Op 5 . - CDS 429727 - 430662 1401 ## COG1879 ABC-type sugar transport system, periplasmic component 405 225 Tu 1 . - CDS 430822 - 432342 1863 ## COG0554 Glycerol kinase - Prom 432454 - 432513 5.1 - Term 432620 - 432666 -0.9 406 226 Tu 1 . - CDS 432692 - 433642 1324 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 433827 - 433886 6.0 + Prom 433807 - 433866 3.8 407 227 Op 1 12/0.018 + CDS 434017 - 434847 1015 ## COG3959 Transketolase, N-terminal subunit 408 227 Op 2 . + CDS 434840 - 435775 1236 ## COG3958 Transketolase, C-terminal subunit + Term 435785 - 435821 3.1 409 228 Op 1 4/0.350 - CDS 435810 - 436439 597 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase 410 228 Op 2 . - CDS 436506 - 438734 3467 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 438923 - 438982 6.3 + Prom 438884 - 438943 6.7 411 229 Op 1 2/0.500 + CDS 438994 - 440202 1082 ## COG2382 Enterochelin esterase and related enzymes 412 229 Op 2 2/0.500 + CDS 440230 - 440433 354 ## COG3251 Uncharacterized protein conserved in bacteria 413 229 Op 3 . + CDS 440444 - 444325 5305 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 414 230 Op 1 7/0.088 - CDS 444390 - 445184 206 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 415 230 Op 2 8/0.062 - CDS 445181 - 446173 1335 ## COG4779 ABC-type enterobactin transport system, permease component 416 230 Op 3 . - CDS 446170 - 447177 1522 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component - Prom 447228 - 447287 3.7 + Prom 447192 - 447251 4.1 417 231 Tu 1 . + CDS 447290 - 448531 1918 ## COG0477 Permeases of the major facilitator superfamily - Term 448839 - 448885 2.1 418 232 Tu 1 . - CDS 448888 - 449847 1186 ## COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component - Prom 449963 - 450022 5.8 + Prom 449947 - 450006 3.5 419 233 Op 1 6/0.119 + CDS 450035 - 451210 1395 ## COG1169 Isochorismate synthase 420 233 Op 2 5/0.235 + CDS 451220 - 452827 2241 ## COG1021 Peptide arylation enzymes 421 233 Op 3 5/0.235 + CDS 452841 - 453692 1345 ## COG1535 Isochorismate hydrolase 422 233 Op 4 5/0.235 + CDS 453692 - 454447 1167 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 423 233 Op 5 4/0.350 + CDS 454505 - 454861 478 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 454925 - 454970 4.1 + Prom 455192 - 455251 6.3 424 234 Op 1 9/0.035 + CDS 455274 - 457379 3203 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 457383 - 457430 2.1 425 234 Op 2 . + CDS 457472 - 457669 332 ## COG2879 Uncharacterized small protein 426 235 Op 1 2/0.500 - CDS 457666 - 458070 648 ## COG1396 Predicted transcriptional regulators 427 235 Op 2 2/0.500 - CDS 458045 - 458347 154 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Prom 458368 - 458427 3.8 428 236 Op 1 1/0.633 - CDS 458531 - 459274 229 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 429 236 Op 2 . - CDS 459332 - 460420 1608 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 460490 - 460549 2.4 + Prom 460492 - 460551 3.8 430 237 Op 1 21/0.000 + CDS 460584 - 462086 1621 ## COG1129 ABC-type sugar transport system, ATPase component 431 237 Op 2 16/0.000 + CDS 462083 - 463081 1573 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 432 237 Op 3 1/0.633 + CDS 463102 - 464166 1714 ## COG1879 ABC-type sugar transport system, periplasmic component 433 238 Tu 1 . + CDS 464270 - 465511 1728 ## COG5276 Uncharacterized conserved protein + Term 465537 - 465571 -0.9 434 239 Tu 1 . - CDS 465809 - 467008 1700 ## COG4857 Predicted kinase - Prom 467111 - 467170 3.1 + Prom 467002 - 467061 2.0 435 240 Tu 1 . + CDS 467110 - 468138 1334 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 436 241 Op 1 . - CDS 468199 - 469464 1670 ## KPK_3948 histidine acid phosphatase family protein 437 241 Op 2 . - CDS 469494 - 470852 1980 ## COG2271 Sugar phosphate permease 438 242 Tu 1 . - CDS 470963 - 471772 1126 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Term 471806 - 471833 -0.1 439 243 Tu 1 . - CDS 471894 - 472877 1241 ## COG1609 Transcriptional regulators - Term 472950 - 472982 2.1 440 244 Op 1 . - CDS 472990 - 474228 1666 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 441 244 Op 2 1/0.633 - CDS 474225 - 475460 1738 ## COG2508 Regulator of polyketide synthase expression 442 244 Op 3 . - CDS 475457 - 476116 1044 ## COG1457 Purine-cytosine permease and related proteins 443 244 Op 4 . - CDS 476132 - 476719 829 ## COG1457 Purine-cytosine permease and related proteins + Prom 476999 - 477058 4.0 444 245 Op 1 3/0.442 + CDS 477171 - 477779 795 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 445 245 Op 2 3/0.442 + CDS 477792 - 478502 976 ## COG1070 Sugar (pentulose and hexulose) kinases + Prom 478804 - 478863 77.9 446 246 Tu 1 . + CDS 479049 - 480077 1369 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 479996 - 480027 -0.1 447 247 Op 1 2/0.500 - CDS 480113 - 481054 1126 ## COG0524 Sugar kinases, ribokinase family 448 247 Op 2 11/0.022 - CDS 481066 - 482070 1592 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 449 247 Op 3 21/0.000 - CDS 482067 - 483056 1411 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 450 247 Op 4 16/0.000 - CDS 483053 - 484555 183 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 451 247 Op 5 . - CDS 484600 - 485580 1323 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 485746 - 485805 8.3 + Prom 485718 - 485777 7.9 452 248 Tu 1 . + CDS 486019 - 488301 2497 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 488126 - 488175 -0.5 453 249 Op 1 3/0.442 - CDS 488409 - 488951 655 ## COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain 454 249 Op 2 . - CDS 488948 - 489637 669 ## COG4229 Predicted enolase-phosphatase - Prom 489700 - 489759 4.5 + Prom 489674 - 489733 3.9 455 250 Tu 1 . + CDS 489763 - 490923 1538 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 456 251 Op 1 8/0.062 - CDS 490924 - 491550 545 ## COG1475 Predicted transcriptional regulators 457 251 Op 2 4/0.350 - CDS 491535 - 492758 1388 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase - Prom 492791 - 492850 3.1 458 252 Tu 1 . - CDS 492870 - 493802 553 ## COG0583 Transcriptional regulator - Prom 493875 - 493934 5.0 459 253 Tu 1 . - CDS 493983 - 494732 961 ## COG1651 Protein-disulfide isomerase - Prom 494764 - 494823 1.8 + Prom 495021 - 495080 3.0 460 254 Op 1 11/0.022 + CDS 495144 - 495707 676 ## COG0450 Peroxiredoxin + Term 495791 - 495821 3.0 461 254 Op 2 . + CDS 495896 - 497461 409 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 497481 - 497531 7.4 - Term 497479 - 497512 5.4 462 255 Tu 1 . - CDS 497534 - 497962 508 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 498062 - 498121 4.8 - Term 498084 - 498115 2.7 463 256 Tu 1 . - CDS 498150 - 498560 523 ## COG0782 Transcription elongation factor - Prom 498631 - 498690 3.4 - Term 498590 - 498624 3.0 464 257 Op 1 . - CDS 498739 - 499536 753 ## COG3719 Ribonuclease I - Prom 499556 - 499615 4.4 - Term 499578 - 499614 3.0 465 257 Op 2 . - CDS 499629 - 501002 1844 ## COG3069 C4-dicarboxylate transporter - Prom 501045 - 501104 4.5 + Prom 501099 - 501158 2.6 466 258 Tu 1 . + CDS 501290 - 501859 662 ## Kvar_3711 antimicrobial peptide resistance and lipid A acylation PagP + Term 502010 - 502043 1.0 + Prom 501952 - 502011 3.7 467 259 Tu 1 . + CDS 502054 - 502263 316 ## COG1278 Cold shock proteins + Term 502275 - 502326 4.1 - Term 502277 - 502303 -0.7 468 260 Tu 1 . - CDS 502330 - 502713 392 ## COG0239 Integral membrane protein possibly involved in chromosome condensation - Prom 502742 - 502801 2.3 + Prom 502679 - 502738 3.0 469 261 Op 1 . + CDS 502803 - 503591 664 ## COG0388 Predicted amidohydrolase + Term 503787 - 503824 -0.8 + Prom 503746 - 503805 2.8 470 261 Op 2 . + CDS 503830 - 504042 176 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 + Term 504084 - 504133 14.2 471 262 Tu 1 . - CDS 504252 - 505217 1092 ## COG0320 Lipoate synthase - Prom 505303 - 505362 6.6 - Term 505316 - 505349 2.3 472 263 Tu 1 . - CDS 505398 - 506357 564 ## COG0583 Transcriptional regulator - Prom 506381 - 506440 4.3 473 264 Tu 1 . - CDS 506487 - 507131 797 ## COG0321 Lipoate-protein ligase B - Term 507192 - 507225 6.2 474 265 Tu 1 . - CDS 507236 - 507499 385 ## COG2921 Uncharacterized conserved protein - Prom 507519 - 507578 2.5 - Term 507512 - 507554 10.3 475 266 Tu 1 12/0.018 - CDS 507612 - 508811 1639 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 508849 - 508908 5.1 476 267 Op 1 8/0.062 - CDS 508951 - 510108 878 ## COG0797 Lipoproteins 477 267 Op 2 19/0.000 - CDS 510120 - 511232 1628 ## COG0772 Bacterial cell division membrane protein 478 267 Op 3 9/0.035 - CDS 511232 - 513133 2390 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 479 267 Op 4 14/0.013 - CDS 513161 - 513628 570 ## COG1576 Uncharacterized conserved protein 480 267 Op 5 6/0.119 - CDS 513632 - 513949 385 ## COG0799 Uncharacterized homolog of plant Iojap protein - Prom 513990 - 514049 4.8 481 268 Op 1 3/0.442 - CDS 514172 - 514801 634 ## COG0406 Fructose-2,6-bisphosphatase 482 268 Op 2 7/0.088 - CDS 514874 - 515524 878 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 483 268 Op 3 12/0.018 - CDS 515517 - 516548 1185 ## COG1466 DNA polymerase III, delta subunit 484 268 Op 4 9/0.035 - CDS 516548 - 517042 616 ## COG2980 Rare lipoprotein B 485 269 Tu 1 . - CDS 517153 - 519735 3430 ## COG0495 Leucyl-tRNA synthetase - Prom 519799 - 519858 3.7 486 270 Tu 1 . + CDS 519962 - 520444 597 ## Kvar_3691 hypothetical protein + Term 520450 - 520502 9.1 - Term 520446 - 520481 7.4 487 271 Op 1 12/0.018 - CDS 520491 - 522284 1872 ## COG3210 Large exoproteins involved in heme utilization or adhesion 488 271 Op 2 . - CDS 522349 - 524019 1563 ## COG2831 Hemolysin activation/secretion protein - Prom 524236 - 524295 5.9 - Term 524342 - 524383 11.1 489 272 Op 1 34/0.000 - CDS 524393 - 525118 546 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 490 272 Op 2 17/0.000 - CDS 525118 - 525792 1104 ## COG0765 ABC-type amino acid transport system, permease component 491 272 Op 3 31/0.000 - CDS 525792 - 526532 1240 ## COG0765 ABC-type amino acid transport system, permease component - Term 526540 - 526573 3.8 492 272 Op 4 4/0.350 - CDS 526697 - 527653 1451 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 527726 - 527785 3.8 - Term 527921 - 527955 7.0 493 273 Tu 1 . - CDS 527964 - 529502 2274 ## COG0815 Apolipoprotein N-acyltransferase - Term 529516 - 529544 0.3 494 274 Tu 1 11/0.022 - CDS 529631 - 530578 1162 ## COG4535 Putative Mg2+ and Co2+ transporter CorC - Term 530606 - 530650 13.9 495 275 Op 1 17/0.000 - CDS 530657 - 531130 701 ## COG0319 Predicted metal-dependent hydrolase 496 275 Op 2 10/0.027 - CDS 531127 - 532173 1429 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 532222 - 532281 1.6 - Term 532279 - 532322 6.1 497 276 Tu 1 . - CDS 532327 - 533751 498 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase - Prom 533914 - 533973 2.4 + Prom 533848 - 533907 3.4 498 277 Tu 1 . + CDS 533931 - 535106 1499 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 535187 - 535231 12.1 - TRNA 535226 - 535300 75.8 # Gln CTG 0 0 - TRNA 535376 - 535450 75.8 # Gln CTG 0 0 - TRNA 535497 - 535573 95.3 # Met CAT 0 0 - TRNA 535597 - 535671 74.3 # Gln TTG 0 0 - TRNA 535708 - 535782 74.3 # Gln TTG 0 0 - TRNA 535806 - 535890 78.3 # Leu TAG 0 0 - TRNA 535899 - 535975 95.3 # Met CAT 0 0 - Term 536153 - 536190 7.1 499 278 Tu 1 . - CDS 536213 - 537877 2415 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) - Prom 537995 - 538054 4.3 - Term 538120 - 538149 2.1 500 279 Tu 1 . - CDS 538156 - 538908 1060 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Prom 538932 - 538991 2.0 501 280 Op 1 7/0.088 - CDS 539037 - 540257 278 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 502 280 Op 2 12/0.018 - CDS 540266 - 541414 1499 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Term 541485 - 541518 3.7 503 281 Tu 1 . - CDS 541528 - 542328 1013 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 542573 - 542632 5.2 + Prom 542475 - 542534 5.6 504 282 Tu 1 . + CDS 542644 - 544599 2254 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 544626 - 544661 8.1 + Prom 544684 - 544743 7.2 505 283 Tu 1 . + CDS 544778 - 546445 2471 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 546457 - 546498 6.2 506 284 Tu 1 . - CDS 546499 - 546690 109 ## KPK_3871 hypothetical protein - Prom 546757 - 546816 2.0 + Prom 546771 - 546830 11.3 507 285 Op 1 . + CDS 546882 - 548285 2087 ## KPK_3870 outer membrane porin, OprD family 508 285 Op 2 . + CDS 548333 - 548665 346 ## Kvar_3670 lipoprotein + Term 548679 - 548725 13.3 - Term 548673 - 548707 6.6 509 286 Op 1 . - CDS 548717 - 550012 1704 ## COG0477 Permeases of the major facilitator superfamily 510 286 Op 2 . - CDS 550068 - 551207 1321 ## Kvar_3668 CitB domain protein 511 286 Op 3 2/0.500 - CDS 551194 - 552597 1794 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 552623 - 552682 6.8 512 287 Tu 1 2/0.500 - CDS 552695 - 553621 892 ## COG0583 Transcriptional regulator - Term 553694 - 553723 2.1 513 288 Tu 1 . - CDS 553749 - 554201 600 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 554274 - 554333 4.5 - Term 554331 - 554377 -0.3 514 289 Tu 1 . - CDS 554493 - 555023 730 ## COG0716 Flavodoxins - Prom 555081 - 555140 3.4 515 290 Tu 1 . - CDS 555175 - 555468 425 ## c0772 LexA regulated protein - Prom 555522 - 555581 4.3 - Term 555484 - 555514 -0.7 516 291 Tu 1 . - CDS 555602 - 556375 968 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 556531 - 556590 2.4 + Prom 556364 - 556423 5.8 517 292 Op 1 6/0.119 + CDS 556559 - 557107 406 ## COG3057 Negative regulator of replication initiationR 518 292 Op 2 . + CDS 557140 - 558780 2316 ## COG0033 Phosphoglucomutase + Term 558794 - 558827 4.1 519 292 Op 3 . + CDS 558835 - 559272 356 ## Kvar_3659 hypothetical protein + Term 559486 - 559531 7.4 - Term 559212 - 559252 5.3 520 293 Op 1 16/0.000 - CDS 559254 - 559856 844 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 521 293 Op 2 15/0.009 - CDS 559928 - 562615 3291 ## COG2205 Osmosensitive K+ channel histidine kinase 522 293 Op 3 18/0.000 - CDS 562616 - 563191 784 ## COG2156 K+-transporting ATPase, c chain 523 293 Op 4 20/0.000 - CDS 563202 - 565250 2937 ## COG2216 High-affinity K+ transport system, ATPase chain B 524 293 Op 5 . - CDS 565271 - 566950 2431 ## COG2060 K+-transporting ATPase, A chain - Prom 567125 - 567184 10.5 + Prom 567122 - 567181 10.0 525 294 Tu 1 . + CDS 567350 - 567556 381 ## CKO_02461 hypothetical protein + Term 567576 - 567630 11.2 + Prom 567637 - 567696 3.2 526 295 Tu 1 . + CDS 567741 - 568229 530 ## COG0415 Deoxyribodipyrimidine photolyase + Term 568452 - 568477 -0.5 + Prom 568231 - 568290 80.3 527 296 Tu 1 . + CDS 568518 - 569267 641 ## COG0415 Deoxyribodipyrimidine photolyase 528 297 Tu 1 . - CDS 569239 - 570717 2289 ## COG3104 Dipeptide/tripeptide permease - Prom 570831 - 570890 3.0 + Prom 570769 - 570828 4.8 529 298 Op 1 4/0.350 + CDS 570986 - 571729 926 ## COG0327 Uncharacterized conserved protein 530 298 Op 2 . + CDS 571744 - 572175 430 ## COG2049 Allophanate hydrolase subunit 1 + Prom 572177 - 572236 80.3 531 299 Op 1 21/0.000 + CDS 572323 - 572493 224 ## COG2049 Allophanate hydrolase subunit 1 532 299 Op 2 8/0.062 + CDS 572487 - 573419 1205 ## COG1984 Allophanate hydrolase subunit 2 533 299 Op 3 . + CDS 573409 - 574161 1003 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 534 299 Op 4 . + CDS 574191 - 574835 656 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 535 299 Op 5 . + CDS 574851 - 575642 906 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 575669 - 575696 1.5 - Term 575657 - 575684 1.5 536 300 Tu 1 . - CDS 575709 - 576992 1599 ## COG0372 Citrate synthase + Prom 577423 - 577482 5.5 537 301 Op 1 24/0.000 + CDS 577633 - 578037 201 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 538 301 Op 2 22/0.000 + CDS 578031 - 578378 503 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 539 301 Op 3 36/0.000 + CDS 578378 - 580144 2275 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 540 301 Op 4 5/0.235 + CDS 580160 - 580876 664 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 541 302 Op 1 21/0.000 + CDS 581260 - 584067 3244 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 542 302 Op 2 6/0.119 + CDS 584082 - 585308 1550 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 585366 - 585427 5.1 543 303 Op 1 39/0.000 + CDS 585454 - 586620 1382 ## COG0045 Succinyl-CoA synthetase, beta subunit 544 303 Op 2 2/0.500 + CDS 586620 - 587489 1109 ## COG0074 Succinyl-CoA synthetase, alpha subunit + Term 587539 - 587569 3.0 + Prom 588085 - 588144 6.9 545 304 Op 1 31/0.000 + CDS 588317 - 589885 2167 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 546 304 Op 2 . + CDS 589901 - 591040 1690 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 547 304 Op 3 . + CDS 591056 - 591169 160 ## 548 305 Tu 1 . + CDS 591300 - 591584 205 ## COG3790 Predicted membrane protein + Term 591784 - 591834 2.2 + Prom 591633 - 591692 2.2 549 306 Op 1 13/0.013 + CDS 591848 - 592138 216 ## COG0824 Predicted thioesterase 550 306 Op 2 30/0.000 + CDS 592135 - 592827 922 ## COG0811 Biopolymer transport proteins 551 306 Op 3 8/0.062 + CDS 592831 - 593259 646 ## COG0848 Biopolymer transport protein 552 306 Op 4 8/0.062 + CDS 593359 - 594696 970 ## COG3064 Membrane protein involved in colicin uptake + Term 594699 - 594739 1.9 + Prom 594728 - 594787 3.5 553 307 Op 1 20/0.000 + CDS 594826 - 596118 1288 ## COG0823 Periplasmic component of the Tol biopolymer transport system 554 307 Op 2 13/0.013 + CDS 596153 - 596677 631 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 555 307 Op 3 6/0.119 + CDS 596687 - 597487 542 ## COG1729 Uncharacterized protein conserved in bacteria + Term 597497 - 597534 4.9 + TRNA 597649 - 597724 99.5 # Lys TTT 0 0 + TRNA 597850 - 597925 94.3 # Val TAC 0 0 + TRNA 597928 - 598003 99.5 # Lys TTT 0 0 + TRNA 598156 - 598231 94.3 # Val TAC 0 0 + TRNA 598235 - 598310 99.5 # Lys TTT 0 0 + TRNA 598457 - 598532 99.5 # Lys TTT 0 0 + TRNA 598566 - 598641 99.5 # Lys TTT 0 0 556 308 Op 1 5/0.235 + CDS 598936 - 599979 1079 ## COG0379 Quinolinate synthase 557 308 Op 2 . + CDS 600015 - 600734 925 ## COG3201 Nicotinamide mononucleotide transporter - Term 600686 - 600722 3.9 558 309 Tu 1 . - CDS 600731 - 601675 1027 ## COG1230 Co/Zn/Cd efflux system component - Prom 601708 - 601767 4.3 - Term 601717 - 601782 25.1 559 310 Tu 1 . - CDS 601794 - 602171 441 ## Kvar_3620 hypothetical protein + Prom 602353 - 602412 6.6 560 311 Tu 1 . + CDS 602456 - 603538 1360 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 603563 - 603607 9.4 - Term 603559 - 603588 2.1 561 312 Tu 1 4/0.350 - CDS 603612 - 604364 1220 ## COG0588 Phosphoglycerate mutase 1 - Prom 604448 - 604507 5.4 - Term 604615 - 604650 7.2 562 313 Op 1 6/0.119 - CDS 604655 - 605698 331 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase 563 313 Op 2 8/0.062 - CDS 605692 - 606840 1442 ## COG0153 Galactokinase 564 313 Op 3 3/0.442 - CDS 606843 - 607889 1188 ## COG1085 Galactose-1-phosphate uridylyltransferase 565 313 Op 4 . - CDS 607899 - 608915 1212 ## COG1087 UDP-glucose 4-epimerase - Prom 608946 - 609005 3.4 - Term 609080 - 609117 5.3 566 314 Op 1 4/0.350 - CDS 609125 - 610597 1774 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 567 314 Op 2 . - CDS 610665 - 611453 946 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 611578 - 611637 4.2 + Prom 611526 - 611585 3.2 568 315 Tu 1 . + CDS 611607 - 611756 117 ## ROD_07581 hypothetical protein + Term 611761 - 611801 10.1 + Prom 611814 - 611873 3.9 569 316 Op 1 23/0.000 + CDS 611899 - 612672 1046 ## COG0725 ABC-type molybdate transport system, periplasmic component 570 316 Op 2 13/0.013 + CDS 612672 - 613361 787 ## COG4149 ABC-type molybdate transport system, permease component 571 316 Op 3 . + CDS 613364 - 614422 1253 ## COG4148 ABC-type molybdate transport system, ATPase component + Term 614608 - 614645 -0.5 572 317 Tu 1 . - CDS 614423 - 615241 1056 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 615476 - 615535 2.5 + Prom 615357 - 615416 5.3 573 318 Tu 1 . + CDS 615470 - 616465 1336 ## COG2706 3-carboxymuconate cyclase + Term 616489 - 616517 1.0 - Term 616476 - 616504 1.0 574 319 Tu 1 . - CDS 616573 - 616851 413 ## Kvar_3605 hypothetical protein 575 320 Tu 1 . - CDS 617322 - 617591 299 ## Kvar_3603 hypothetical protein - Prom 617764 - 617823 5.8 + Prom 617643 - 617702 6.6 576 321 Tu 1 . + CDS 617900 - 619111 977 ## COG2200 FOG: EAL domain + Prom 619180 - 619239 3.7 577 322 Tu 1 . + CDS 619266 - 620000 570 ## COG0789 Predicted transcriptional regulators + Term 620122 - 620164 3.9 - Term 619989 - 620018 -0.8 578 323 Tu 1 . - CDS 620038 - 620592 484 ## COG2771 DNA-binding HTH domain-containing proteins 579 324 Tu 1 . - CDS 620675 - 620890 231 ## KP1_1732 hypothetical protein + Prom 621436 - 621495 2.9 580 325 Tu 1 . + CDS 621625 - 622131 671 ## Kvar_3598 hypothetical protein 581 326 Op 1 . - CDS 622148 - 623113 1210 ## COG3274 Uncharacterized protein conserved in bacteria 582 326 Op 2 27/0.000 - CDS 623110 - 626175 3416 ## COG0841 Cation/multidrug efflux pump 583 326 Op 3 . - CDS 626176 - 627261 902 ## COG0845 Membrane-fusion protein 584 326 Op 4 . - CDS 627316 - 627426 229 ## - Prom 627553 - 627612 5.4 + Prom 627621 - 627680 5.6 585 327 Op 1 3/0.442 + CDS 627795 - 628226 429 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 586 327 Op 2 . + CDS 628278 - 630965 3497 ## COG0474 Cation transport ATPase + Term 630997 - 631023 1.7 - Term 630981 - 631015 6.7 587 328 Tu 1 . - CDS 631238 - 632521 1514 ## COG4677 Pectin methylesterase - Prom 632687 - 632746 5.1 + Prom 632667 - 632726 4.5 588 329 Op 1 7/0.088 + CDS 632778 - 633995 1493 ## COG1228 Imidazolonepropionase and related amidohydrolases 589 329 Op 2 1/0.633 + CDS 633992 - 634948 1012 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 590 329 Op 3 . + CDS 635010 - 635735 896 ## COG2188 Transcriptional regulators + Prom 635740 - 635799 5.5 591 330 Op 1 6/0.119 + CDS 635878 - 637566 2160 ## COG2987 Urocanate hydratase 592 330 Op 2 2/0.500 + CDS 637563 - 639089 1949 ## COG2986 Histidine ammonia-lyase + Prom 639102 - 639161 2.4 593 330 Op 3 . + CDS 639188 - 640570 2180 ## COG1113 Gamma-aminobutyrate permease and related permeases 594 331 Op 1 4/0.350 - CDS 640671 - 641147 530 ## COG1881 Phospholipid-binding protein 595 331 Op 2 . - CDS 641218 - 642525 1654 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 642634 - 642693 3.6 + Prom 642503 - 642562 5.4 596 332 Op 1 12/0.018 + CDS 642593 - 643633 1310 ## COG0502 Biotin synthase and related enzymes 597 332 Op 2 6/0.119 + CDS 643630 - 644787 1372 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 598 332 Op 3 9/0.035 + CDS 644771 - 645526 854 ## COG0500 SAM-dependent methyltransferases 599 332 Op 4 . + CDS 645519 - 646241 784 ## COG0132 Dethiobiotin synthetase + Term 646486 - 646515 2.1 600 333 Tu 1 . - CDS 646183 - 646905 181 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 647524 - 647583 4.0 601 334 Tu 1 . + CDS 647616 - 649637 2830 ## COG0556 Helicase subunit of the DNA excision repair complex + Term 649740 - 649766 1.7 + Prom 649723 - 649782 2.2 602 335 Tu 1 . + CDS 649817 - 649909 140 ## - Term 649780 - 649808 -0.9 603 336 Op 1 40/0.000 - CDS 649888 - 650985 1535 ## COG0642 Signal transduction histidine kinase 604 336 Op 2 3/0.442 - CDS 650989 - 651660 947 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 605 336 Op 3 . - CDS 651660 - 653300 1804 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 653337 - 653396 5.1 606 337 Tu 1 . - CDS 653404 - 654309 996 ## COG0391 Uncharacterized conserved protein - Prom 654407 - 654466 3.3 + Prom 654386 - 654445 4.0 607 338 Op 1 6/0.119 + CDS 654644 - 655633 1078 ## COG2896 Molybdenum cofactor biosynthesis enzyme 608 338 Op 2 11/0.022 + CDS 655657 - 656169 750 ## COG0521 Molybdopterin biosynthesis enzymes 609 338 Op 3 11/0.022 + CDS 656173 - 656661 849 ## COG0315 Molybdenum cofactor biosynthesis enzyme 610 338 Op 4 21/0.000 + CDS 656654 - 656902 396 ## COG1977 Molybdopterin converting factor, small subunit 611 338 Op 5 5/0.235 + CDS 656904 - 657356 665 ## COG0314 Molybdopterin converting factor, large subunit 612 338 Op 6 . + CDS 657402 - 658106 1176 ## COG0670 Integral membrane protein, interacts with FtsH + Term 658176 - 658200 -1.0 613 339 Tu 1 . - CDS 658496 - 659506 494 ## COG3547 Transposase and inactivated derivatives - Prom 659537 - 659596 2.1 + Prom 659183 - 659242 2.7 614 340 Tu 1 . + CDS 659441 - 659566 73 ## + Term 659665 - 659689 -1.0 615 341 Op 1 5/0.235 - CDS 660693 - 661658 1419 ## COG0392 Predicted integral membrane protein 616 341 Op 2 8/0.062 - CDS 661655 - 662899 1503 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 617 341 Op 3 . - CDS 662896 - 663657 484 ## COG3568 Metal-dependent hydrolase + Prom 663648 - 663707 2.3 618 342 Tu 1 . + CDS 663789 - 664199 546 ## ROD_07911 hypothetical protein + Term 664329 - 664356 -0.4 619 343 Op 1 22/0.000 - CDS 664161 - 665267 1395 ## COG0842 ABC-type multidrug transport system, permease component 620 343 Op 2 45/0.000 - CDS 665397 - 666530 1732 ## COG0842 ABC-type multidrug transport system, permease component 621 343 Op 3 10/0.027 - CDS 666520 - 668259 334 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 622 343 Op 4 15/0.009 - CDS 668252 - 669247 1290 ## COG0845 Membrane-fusion protein 623 343 Op 5 5/0.235 - CDS 669247 - 669906 625 ## COG1309 Transcriptional regulator 624 343 Op 6 . - CDS 669980 - 670903 833 ## COG0583 Transcriptional regulator - Prom 670986 - 671045 6.7 + Prom 671089 - 671148 6.4 625 344 Op 1 9/0.035 + CDS 671322 - 672653 866 ## COG0477 Permeases of the major facilitator superfamily 626 344 Op 2 1/0.633 + CDS 672704 - 673453 254 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 627 344 Op 3 12/0.018 + CDS 673467 - 674312 1395 ## COG3959 Transketolase, N-terminal subunit 628 344 Op 4 . + CDS 674312 - 675304 1338 ## COG3958 Transketolase, C-terminal subunit + Term 675326 - 675361 8.1 + Prom 675329 - 675388 3.0 629 345 Tu 1 . + CDS 675520 - 676875 1688 ## COG0513 Superfamily II DNA and RNA helicases + Term 676915 - 676958 7.1 + Prom 676978 - 677037 2.4 630 346 Op 1 4/0.350 + CDS 677063 - 679219 2638 ## COG1199 Rad3-related DNA helicases 631 346 Op 2 . + CDS 679249 - 680217 1167 ## COG0547 Anthranilate phosphoribosyltransferase - Term 680229 - 680264 6.4 632 347 Tu 1 . - CDS 680326 - 680586 385 ## Ent638_1291 hypothetical protein - Prom 680709 - 680768 3.4 633 348 Op 1 . - CDS 680872 - 681138 80 ## COG1734 DnaK suppressor protein 634 348 Op 2 . - CDS 681159 - 681419 150 ## Kvar_3546 hypothetical protein 635 349 Tu 1 . - CDS 681559 - 682173 534 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 682395 - 682454 1.5 636 350 Tu 1 . + CDS 682270 - 683184 1046 ## COG3129 Predicted SAM-dependent methyltransferase 637 351 Tu 1 . - CDS 683185 - 685380 2534 ## COG0668 Small-conductance mechanosensitive channel - Prom 685403 - 685462 4.3 - Term 685446 - 685485 7.4 638 352 Op 1 34/0.000 - CDS 685493 - 686215 600 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 639 352 Op 2 31/0.000 - CDS 686212 - 686871 1102 ## COG0765 ABC-type amino acid transport system, permease component - Term 686909 - 686954 6.0 640 352 Op 3 4/0.350 - CDS 686997 - 687743 1274 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Term 688128 - 688167 12.3 641 353 Tu 1 . - CDS 688174 - 688677 746 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 688755 - 688814 3.9 - Term 688830 - 688874 2.3 642 354 Tu 1 . - CDS 688915 - 689802 1126 ## COG5006 Predicted permease, DMT superfamily + Prom 689937 - 689996 5.2 643 355 Tu 1 . + CDS 690154 - 690669 556 ## COG3637 Opacity protein and related surface antigens 644 356 Tu 1 . - CDS 691257 - 692837 2218 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 692977 - 693036 2.4 - Term 693073 - 693104 2.4 645 357 Tu 1 . - CDS 693106 - 693231 104 ## KPK_3724 hypothetical protein - Prom 693327 - 693386 3.6 + Prom 693258 - 693317 5.5 646 358 Op 1 4/0.350 + CDS 693417 - 693890 679 ## COG1321 Mn-dependent transcriptional regulator 647 358 Op 2 . + CDS 693887 - 694999 1388 ## COG0471 Di- and tricarboxylate transporters + Prom 695015 - 695074 1.5 648 359 Tu 1 . + CDS 695107 - 696147 1373 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 696172 - 696203 4.1 + Prom 696206 - 696265 5.1 649 360 Op 1 3/0.442 + CDS 696304 - 697680 1680 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 650 360 Op 2 . + CDS 697748 - 698464 933 ## COG2188 Transcriptional regulators + Term 698557 - 698623 13.9 - Term 698553 - 698597 12.2 651 361 Op 1 . - CDS 698612 - 699526 1237 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 699593 - 699652 4.9 652 361 Op 2 . - CDS 699727 - 700512 860 ## COG2365 Protein tyrosine/serine phosphatase - Prom 700673 - 700732 3.3 + Prom 700593 - 700652 4.7 653 362 Tu 1 . + CDS 700691 - 702283 2334 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 702607 - 702655 1.0 654 363 Op 1 2/0.500 - CDS 702660 - 705023 3247 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 655 363 Op 2 . - CDS 705039 - 706340 1766 ## COG0477 Permeases of the major facilitator superfamily - Prom 706409 - 706468 3.3 + Prom 706381 - 706440 6.0 656 364 Tu 1 . + CDS 706640 - 707713 1405 ## COG1609 Transcriptional regulators + Term 707793 - 707833 6.0 657 365 Tu 1 . - CDS 707710 - 708975 1472 ## Kvar_3523 hypothetical protein - Prom 709005 - 709064 4.2 - Term 709078 - 709108 3.3 658 366 Tu 1 . - CDS 709116 - 709931 1106 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 709960 - 710019 4.9 - Term 710061 - 710105 -0.3 659 367 Op 1 11/0.022 - CDS 710112 - 712544 3336 ## COG1882 Pyruvate-formate lyase 660 367 Op 2 1/0.633 - CDS 712549 - 713448 1145 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 713468 - 713527 3.0 - Term 713561 - 713596 6.5 661 368 Op 1 9/0.035 - CDS 713603 - 714358 909 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 662 368 Op 2 . - CDS 714358 - 715593 1607 ## COG0303 Molybdopterin biosynthesis enzyme - Prom 715705 - 715764 3.6 + Prom 715653 - 715712 6.3 663 369 Op 1 3/0.442 + CDS 715829 - 716770 1133 ## COG1446 Asparaginase 664 369 Op 2 11/0.022 + CDS 716788 - 718647 810 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 665 369 Op 3 38/0.000 + CDS 718680 - 720221 2088 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 720234 - 720274 8.1 666 369 Op 4 49/0.000 + CDS 720294 - 721214 1150 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 667 369 Op 5 . + CDS 721222 - 722127 986 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components + Term 722135 - 722172 4.5 668 370 Tu 1 . - CDS 723373 - 724698 1337 ## PROTEIN SUPPORTED gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase - Prom 724757 - 724816 5.1 + Prom 724829 - 724888 4.5 669 371 Tu 1 . + CDS 724944 - 725846 879 ## Kvar_3511 hypothetical protein + Term 725891 - 725942 2.1 670 372 Tu 1 . - CDS 725859 - 727115 1738 ## COG0477 Permeases of the major facilitator superfamily - Prom 727257 - 727316 5.6 + Prom 727300 - 727359 5.5 671 373 Tu 1 . + CDS 727494 - 727877 254 ## KPK_3696 biofilm formation regulatory protein BssR + Term 727889 - 727931 1.3 672 374 Tu 1 . + CDS 727993 - 729102 1396 ## COG2133 Glucose/sorbosone dehydrogenases + Term 729276 - 729302 -1.0 673 375 Tu 1 . - CDS 729105 - 729731 841 ## COG0625 Glutathione S-transferase - Prom 729825 - 729884 3.0 + Prom 729812 - 729871 2.2 674 376 Tu 1 . + CDS 729978 - 731189 1650 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Term 731057 - 731093 0.1 675 377 Tu 1 . - CDS 731229 - 731987 944 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 732028 - 732087 3.3 - Term 731994 - 732026 5.0 676 378 Tu 1 . - CDS 732090 - 732683 933 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 732822 - 732881 4.1 + Prom 732822 - 732881 3.7 677 379 Tu 1 . + CDS 733010 - 734242 1887 ## COG0477 Permeases of the major facilitator superfamily + Term 734345 - 734389 4.0 678 380 Op 1 2/0.500 - CDS 734285 - 735097 1002 ## COG0561 Predicted hydrolases of the HAD superfamily 679 380 Op 2 . - CDS 735097 - 736299 1695 ## COG0477 Permeases of the major facilitator superfamily - Prom 736326 - 736385 2.1 680 381 Tu 1 . + CDS 736382 - 736945 729 ## COG3226 Uncharacterized protein conserved in bacteria + Term 737084 - 737133 1.2 - Term 737028 - 737083 -0.8 681 382 Tu 1 . - CDS 737125 - 738819 2405 ## COG2985 Predicted permease - Prom 738933 - 738992 4.0 682 383 Tu 1 . + CDS 739078 - 739461 348 ## Kvar_3498 hypothetical protein + Term 739511 - 739540 -0.4 683 384 Tu 1 . - CDS 739468 - 739731 469 ## COG0695 Glutaredoxin and related proteins - Prom 739886 - 739945 2.4 + Prom 739823 - 739882 3.1 684 385 Op 1 . + CDS 739934 - 740221 400 ## Kvar_3496 hypothetical protein 685 385 Op 2 4/0.350 + CDS 740205 - 740927 958 ## COG0778 Nitroreductase + Term 741006 - 741036 2.1 686 386 Op 1 . + CDS 741042 - 741944 1502 ## PROTEIN SUPPORTED gi|206580421|ref|YP_002239499.1| ribosomal protein S6 modification protein + Term 741962 - 742013 -0.2 687 386 Op 2 . + CDS 742033 - 742512 509 ## Kvar_3493 sensory transduction regulator + Term 742746 - 742774 -0.1 + Prom 742646 - 742705 6.1 688 387 Tu 1 13/0.013 + CDS 742861 - 743973 1550 ## COG0687 Spermidine/putrescine-binding periplasmic protein 689 388 Op 1 30/0.000 + CDS 744089 - 745270 1374 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 690 388 Op 2 36/0.000 + CDS 745281 - 746234 1579 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 691 388 Op 3 . + CDS 746231 - 747076 1155 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Term 747108 - 747140 7.0 692 389 Op 1 . + CDS 747149 - 747622 520 ## CKO_02248 hypothetical protein 693 389 Op 2 1/0.633 + CDS 747664 - 748791 1379 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 694 389 Op 3 40/0.000 + CDS 748870 - 749586 1006 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 695 389 Op 4 . + CDS 749583 - 751055 1566 ## COG0642 Signal transduction histidine kinase - Term 751091 - 751134 1.1 696 390 Tu 1 4/0.350 - CDS 751139 - 751870 1173 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 751937 - 751996 6.6 - Term 751981 - 752019 3.1 697 391 Op 1 12/0.018 - CDS 752055 - 752723 1123 ## COG4160 ABC-type arginine/histidine transport system, permease component 698 391 Op 2 12/0.018 - CDS 752723 - 753439 871 ## COG4215 ABC-type arginine transport system, permease component 699 391 Op 3 7/0.088 - CDS 753446 - 754177 1145 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 700 391 Op 4 . - CDS 754198 - 754992 498 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 701 392 Tu 1 . - CDS 755153 - 755668 667 ## KPK_3665 putative lipoprotein - Prom 755839 - 755898 4.0 - Term 755862 - 755905 6.2 702 393 Tu 1 . - CDS 755923 - 756195 373 ## Kvar_3478 hypothetical protein - Prom 756299 - 756358 5.8 703 394 Op 1 . + CDS 756557 - 757696 1014 ## COG2199 FOG: GGDEF domain 704 394 Op 2 . + CDS 757728 - 758558 1182 ## COG3023 Negative regulator of beta-lactamase expression 705 395 Op 1 4/0.350 - CDS 758555 - 759568 1094 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 759593 - 759652 2.6 706 395 Op 2 4/0.350 - CDS 759656 - 761098 1262 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 707 395 Op 3 5/0.235 - CDS 761109 - 762110 1166 ## COG2008 Threonine aldolase 708 395 Op 4 . - CDS 762149 - 763867 2151 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 764002 - 764061 2.4 + Prom 763928 - 763987 3.5 709 396 Tu 1 . + CDS 764019 - 764453 560 ## KP1_1871 hypothetical protein 710 397 Op 1 2/0.500 - CDS 764661 - 765629 1246 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 711 397 Op 2 2/0.500 - CDS 765640 - 767292 2341 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 767367 - 767426 2.5 - Term 767392 - 767427 6.1 712 398 Tu 1 . - CDS 767436 - 768335 747 ## COG2431 Predicted membrane protein - Prom 768368 - 768427 2.9 - Term 768408 - 768444 3.0 713 399 Tu 1 . - CDS 768451 - 769146 1000 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Prom 769473 - 769532 3.4 714 400 Tu 1 . + CDS 769566 - 771224 1398 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family + Prom 771274 - 771333 2.2 715 401 Op 1 13/0.013 + CDS 771362 - 772477 1398 ## COG0845 Membrane-fusion protein 716 401 Op 2 . + CDS 772474 - 774414 359 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Term 774424 - 774456 3.2 - Term 774405 - 774449 7.1 717 402 Tu 1 . - CDS 774481 - 774702 201 ## COG1278 Cold shock proteins - Prom 774791 - 774850 4.9 + Prom 774748 - 774807 2.5 718 403 Op 1 19/0.000 + CDS 775028 - 775345 275 ## COG2127 Uncharacterized conserved protein 719 403 Op 2 . + CDS 775376 - 777655 1368 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 777678 - 777706 2.1 - Term 777709 - 777740 3.2 720 404 Tu 1 . - CDS 777773 - 777991 257 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 778028 - 778087 2.4 + Prom 777680 - 777739 1.6 721 405 Tu 1 . + CDS 777887 - 778159 73 ## 722 406 Op 1 5/0.235 - CDS 778343 - 779065 740 ## COG2360 Leu/Phe-tRNA-protein transferase 723 406 Op 2 14/0.013 - CDS 779087 - 780808 230 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 724 406 Op 3 8/0.062 - CDS 780809 - 782575 1973 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components - Prom 782612 - 782671 4.4 - Term 782628 - 782662 3.6 725 407 Tu 1 . - CDS 782690 - 783685 717 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 783816 - 783875 8.1 726 408 Tu 1 . + CDS 784191 - 784685 535 ## COG1522 Transcriptional regulators + Term 784742 - 784785 12.2 727 409 Tu 1 . + CDS 784821 - 786080 1093 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Prom 786512 - 786571 80.4 728 410 Op 1 . + CDS 786660 - 789200 2573 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 729 410 Op 2 8/0.062 + CDS 789323 - 789934 736 ## COG2834 Outer membrane lipoprotein-sorting protein 730 410 Op 3 8/0.062 + CDS 789943 - 791286 1401 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Term 791322 - 791354 3.1 + Prom 791293 - 791352 1.9 731 411 Tu 1 2/0.500 + CDS 791378 - 792670 1703 ## COG0172 Seryl-tRNA synthetase + Term 792694 - 792719 -0.5 + Prom 792750 - 792809 5.2 732 412 Op 1 16/0.000 + CDS 792871 - 795309 2629 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 733 412 Op 2 9/0.035 + CDS 795320 - 795937 645 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 734 412 Op 3 1/0.633 + CDS 795939 - 796808 950 ## COG3302 DMSO reductase anchor subunit + Prom 796881 - 796940 5.0 735 413 Tu 1 . + CDS 797084 - 798232 1499 ## COG0477 Permeases of the major facilitator superfamily + Term 798239 - 798278 9.1 - Term 798222 - 798264 0.7 736 414 Tu 1 . - CDS 798398 - 799138 1061 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 799221 - 799280 3.7 - Term 799265 - 799297 5.0 737 415 Op 1 7/0.088 - CDS 799330 - 801612 2663 ## COG1882 Pyruvate-formate lyase 738 415 Op 2 3/0.442 - CDS 801664 - 802521 836 ## COG2116 Formate/nitrite family of transporters - Prom 802749 - 802808 10.9 - Term 802844 - 802875 2.4 739 416 Tu 1 . - CDS 802907 - 804667 2382 ## COG1944 Uncharacterized conserved protein - Prom 804889 - 804948 3.0 + Prom 804697 - 804756 3.1 740 417 Tu 1 . + CDS 804784 - 805476 775 ## COG2323 Predicted membrane protein + Term 805486 - 805525 0.7 + Prom 805540 - 805599 2.4 741 418 Op 1 6/0.119 + CDS 805665 - 806753 1336 ## COG1932 Phosphoserine aminotransferase + Term 806774 - 806808 4.1 742 418 Op 2 7/0.088 + CDS 806827 - 808110 1617 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 808220 - 808259 2.5 + Prom 808205 - 808264 4.3 743 419 Op 1 21/0.000 + CDS 808285 - 808968 260 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 744 419 Op 2 16/0.000 + CDS 809102 - 810775 2801 ## PROTEIN SUPPORTED gi|152969495|ref|YP_001334604.1| 30S ribosomal protein S1 + Term 810779 - 810825 0.9 + Prom 810797 - 810856 2.0 745 419 Op 3 2/0.500 + CDS 810927 - 811214 317 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 811234 - 811291 4.2 746 420 Op 1 5/0.235 + CDS 811420 - 813684 1805 ## COG0658 Predicted membrane metal-binding protein 747 420 Op 2 9/0.035 + CDS 813721 - 815469 259 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 748 420 Op 3 4/0.350 + CDS 815466 - 816446 856 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 749 420 Op 4 4/0.350 + CDS 816501 - 817730 1246 ## COG3214 Uncharacterized protein conserved in bacteria 750 420 Op 5 11/0.022 + CDS 817794 - 817976 155 ## COG2835 Uncharacterized conserved protein 751 420 Op 6 . + CDS 817973 - 818719 875 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase + Prom 818772 - 818831 1.9 752 421 Tu 1 . + CDS 818857 - 819750 979 ## Kvar_3430 aminoglycoside phosphotransferase - Term 819538 - 819585 8.5 753 422 Tu 1 . - CDS 819727 - 820506 909 ## COG1434 Uncharacterized conserved protein - Prom 820546 - 820605 2.3 + Prom 820496 - 820555 2.4 754 423 Op 1 6/0.119 + CDS 820628 - 821428 933 ## COG0500 SAM-dependent methyltransferases 755 423 Op 2 7/0.088 + CDS 821425 - 822747 1812 ## COG3006 Uncharacterized protein involved in chromosome partitioning 756 423 Op 3 8/0.062 + CDS 822728 - 823432 889 ## COG3095 Uncharacterized protein involved in chromosome partitioning 757 423 Op 4 4/0.350 + CDS 823432 - 827880 6539 ## COG3096 Uncharacterized protein involved in chromosome partitioning + Term 827917 - 827948 2.1 + Prom 827920 - 827979 6.9 758 424 Tu 1 . + CDS 828081 - 829871 1621 ## COG2989 Uncharacterized protein conserved in bacteria + Term 829918 - 829953 6.4 759 425 Tu 1 . - CDS 829808 - 830023 65 ## gi|262040975|ref|ZP_06014197.1| hypothetical protein HMPREF0484_1213 - Prom 830131 - 830190 5.4 + Prom 829941 - 830000 1.9 760 426 Op 1 7/0.088 + CDS 830175 - 830726 144 ## COG3108 Uncharacterized protein conserved in bacteria 761 426 Op 2 . + CDS 830740 - 831387 723 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 831414 - 831441 1.5 - Term 831397 - 831435 5.8 762 427 Tu 1 . - CDS 831464 - 832654 1634 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 832700 - 832759 3.2 - Term 832778 - 832807 2.1 763 428 Tu 1 . - CDS 832842 - 833921 1514 ## COG3203 Outer membrane protein (porin) - Term 834456 - 834493 7.1 764 429 Tu 1 . - CDS 834513 - 835913 2046 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 835967 - 836026 5.3 - Term 836041 - 836069 2.3 765 430 Tu 1 . - CDS 836079 - 837296 1419 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 837338 - 837397 4.9 + Prom 837375 - 837434 3.0 766 431 Tu 1 . + CDS 837608 - 840223 3455 ## COG0308 Aminopeptidase N + Term 840340 - 840377 5.4 - Term 840116 - 840152 -0.2 767 432 Op 1 24/0.000 - CDS 840321 - 841094 1107 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 768 432 Op 2 8/0.062 - CDS 841091 - 841882 1156 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 769 432 Op 3 5/0.235 - CDS 841893 - 843038 1271 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 770 432 Op 4 4/0.350 - CDS 843035 - 843997 1186 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 771 432 Op 5 . - CDS 843990 - 844565 778 ## COG0431 Predicted flavoprotein - Prom 844599 - 844658 2.2 772 433 Tu 1 . - CDS 844754 - 844870 65 ## + Prom 844554 - 844613 5.4 773 434 Tu 1 . + CDS 844814 - 845824 977 ## COG0167 Dihydroorotate dehydrogenase + Term 845848 - 845883 2.4 + Prom 845831 - 845890 3.9 774 435 Tu 1 . + CDS 845994 - 846536 611 ## KPK_3592 hypothetical protein + Term 846537 - 846568 -0.9 - Term 846467 - 846524 1.2 775 436 Tu 1 . - CDS 846533 - 847600 1137 ## COG3217 Uncharacterized Fe-S protein - Prom 847697 - 847756 4.3 + Prom 847656 - 847715 7.2 776 437 Op 1 6/0.119 + CDS 847742 - 849847 2957 ## COG0116 Predicted N6-adenine-specific DNA methylase 777 437 Op 2 5/0.235 + CDS 849860 - 851767 2517 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 778 437 Op 3 11/0.022 + CDS 851782 - 853050 1098 ## COG2995 Uncharacterized paraquat-inducible protein A 779 437 Op 4 8/0.062 + CDS 853040 - 854677 2052 ## COG3008 Paraquat-inducible protein B 780 437 Op 5 . + CDS 854677 - 855240 638 ## COG3009 Uncharacterized protein conserved in bacteria + Term 855258 - 855306 14.2 - Term 855668 - 855704 4.9 781 438 Op 1 8/0.062 - CDS 855730 - 856248 797 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 782 438 Op 2 . - CDS 856318 - 858075 1831 ## COG1067 Predicted ATP-dependent protease - Prom 858103 - 858162 6.2 + Prom 858176 - 858235 2.8 783 439 Tu 1 . + CDS 858261 - 858713 510 ## COG3120 Uncharacterized protein conserved in bacteria + Term 858783 - 858827 3.7 - Term 858768 - 858814 11.7 784 440 Tu 1 . - CDS 858824 - 859876 932 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 860026 - 860085 11.0 785 441 Tu 1 . - CDS 860229 - 860738 278 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation - Prom 860767 - 860826 4.8 + Prom 860976 - 861035 3.4 786 442 Tu 1 . + CDS 861068 - 861685 339 ## COG3070 Regulator of competence-specific genes + Term 861771 - 861801 -1.0 787 443 Op 1 5/0.235 - CDS 861699 - 863834 2600 ## COG1289 Predicted membrane protein 788 443 Op 2 . - CDS 863852 - 864298 343 ## COG3304 Predicted membrane protein - Prom 864331 - 864390 3.2 + Prom 864334 - 864393 4.3 789 444 Tu 1 . + CDS 864456 - 866477 2098 ## COG0210 Superfamily I DNA and RNA helicases 790 445 Tu 1 . - CDS 866489 - 866947 647 ## COG1803 Methylglyoxal synthase - Prom 866970 - 867029 2.9 + Prom 866911 - 866970 2.2 791 446 Tu 1 . + CDS 867101 - 867514 547 ## COG1832 Predicted CoA-binding protein + Term 867515 - 867553 5.3 - Term 867503 - 867541 5.3 792 447 Op 1 3/0.442 - CDS 867544 - 867861 375 ## COG3785 Uncharacterized conserved protein 793 447 Op 2 . - CDS 867921 - 869123 602 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative - Prom 869165 - 869224 1.8 794 448 Op 1 3/0.442 + CDS 869314 - 869868 561 ## COG1881 Phospholipid-binding protein 795 448 Op 2 1/0.633 + CDS 869886 - 870674 870 ## COG2207 AraC-type DNA-binding domain-containing proteins 796 448 Op 3 . + CDS 870723 - 871004 391 ## COG1254 Acylphosphatases + Term 871031 - 871058 -0.8 797 449 Op 1 2/0.500 - CDS 871001 - 871330 557 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Prom 871355 - 871414 4.7 - Term 871365 - 871400 5.6 798 449 Op 2 . - CDS 871419 - 872078 907 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 872179 - 872238 5.1 + Prom 872144 - 872203 2.3 799 450 Tu 1 . + CDS 872392 - 873972 2027 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 874215 - 874254 10.0 + TRNA 874120 - 874207 76.9 # Ser TGA 0 0 800 451 Tu 1 . + CDS 874511 - 876937 1948 ## COG0058 Glucan phosphorylase 801 452 Tu 1 . + CDS 877002 - 877337 452 ## KP1_1977 putative anti-sigma factor antagonist + Term 877359 - 877392 -0.5 802 453 Tu 1 . - CDS 877379 - 878914 1064 ## COG2200 FOG: EAL domain - Prom 879110 - 879169 6.5 + Prom 879187 - 879246 7.9 803 454 Op 1 21/0.000 + CDS 879317 - 880333 1165 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 804 454 Op 2 17/0.000 + CDS 880427 - 881929 1919 ## COG1178 ABC-type Fe3+ transport system, permease component 805 454 Op 3 . + CDS 881931 - 882959 806 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components + Term 883087 - 883122 -0.9 + Prom 883111 - 883170 2.3 806 455 Tu 1 . + CDS 883203 - 884123 965 ## COG2199 FOG: GGDEF domain 807 456 Tu 1 . - CDS 884120 - 884953 830 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 885012 - 885071 1.9 + Prom 884929 - 884988 4.8 808 457 Tu 1 . + CDS 885215 - 885982 941 ## COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin + Term 886055 - 886089 0.1 - Term 885796 - 885827 -0.3 809 458 Op 1 2/0.500 - CDS 885996 - 886337 486 ## COG1445 Phosphotransferase system fructose-specific component IIB 810 458 Op 2 11/0.022 - CDS 886353 - 887228 732 ## COG1180 Pyruvate-formate lyase-activating enzyme 811 458 Op 3 4/0.350 - CDS 887194 - 889491 2723 ## COG1882 Pyruvate-formate lyase 812 458 Op 4 7/0.088 - CDS 889541 - 889861 551 ## COG1445 Phosphotransferase system fructose-specific component IIB 813 458 Op 5 . - CDS 889882 - 890958 1724 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 891152 - 891211 7.5 + Prom 891125 - 891184 3.4 814 459 Tu 1 . + CDS 891268 - 893769 3151 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 893850 - 893887 1.2 815 460 Tu 1 . - CDS 893807 - 894772 991 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 894780 - 894820 3.0 816 461 Op 1 . - CDS 894829 - 896277 1805 ## COG1012 NAD-dependent aldehyde dehydrogenases 817 461 Op 2 3/0.442 - CDS 896296 - 897420 1528 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 818 461 Op 3 3/0.442 - CDS 897457 - 899064 2207 ## COG1292 Choline-glycine betaine transporter - Prom 899177 - 899236 3.9 819 462 Tu 1 . - CDS 900179 - 901264 1356 ## COG0473 Isocitrate/isopropylmalate dehydrogenase - Prom 901300 - 901359 2.3 + Prom 901264 - 901323 3.5 820 463 Tu 1 . + CDS 901368 - 902309 1156 ## COG0583 Transcriptional regulator 821 464 Op 1 6/0.119 - CDS 902306 - 903586 2062 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 822 464 Op 2 4/0.350 - CDS 903589 - 905076 1958 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 905219 - 905278 4.1 - Term 905358 - 905388 3.6 823 465 Op 1 1/0.633 - CDS 905396 - 905953 520 ## COG1396 Predicted transcriptional regulators 824 465 Op 2 . - CDS 905979 - 906731 322 ## COG2071 Predicted glutamine amidotransferases - Prom 906844 - 906903 4.4 + Prom 906808 - 906867 4.6 825 466 Tu 1 . + CDS 906957 - 908378 1663 ## COG0174 Glutamine synthetase 826 467 Tu 1 . + CDS 908732 - 910123 2061 ## COG0531 Amino acid transporters + Term 910145 - 910185 6.2 827 468 Tu 1 . - CDS 910243 - 910365 135 ## KP1_2008 hypothetical protein - Prom 910455 - 910514 3.9 + Prom 910536 - 910595 2.7 828 469 Tu 1 . + CDS 910622 - 910843 341 ## Kvar_3355 hypothetical protein 829 470 Tu 1 . - CDS 910864 - 911652 817 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Prom 911673 - 911732 2.0 - Term 911659 - 911724 17.2 830 471 Tu 1 . - CDS 911768 - 912217 542 ## COG1733 Predicted transcriptional regulators - Prom 912338 - 912397 4.0 + Prom 912282 - 912341 3.3 831 472 Tu 1 . + CDS 912370 - 913617 1807 ## KP1_2013 glucose-1-phosphatase/inositol phosphatase + Term 913627 - 913655 1.0 - Term 913607 - 913649 10.1 832 473 Op 1 . - CDS 913685 - 913912 494 ## Kvar_3351 hypothetical protein 833 473 Op 2 . - CDS 913933 - 914529 762 ## COG0655 Multimeric flavodoxin WrbA - Prom 914625 - 914684 4.0 + Prom 915220 - 915279 3.6 834 474 Tu 1 . + CDS 915302 - 916240 1172 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 916327 - 916370 -0.9 835 475 Op 1 1/0.633 - CDS 916959 - 918281 733 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 836 475 Op 2 5/0.235 - CDS 918303 - 918797 525 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 837 475 Op 3 4/0.350 - CDS 918808 - 919398 664 ## COG0778 Nitroreductase 838 475 Op 4 5/0.235 - CDS 919395 - 920195 905 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 839 475 Op 5 2/0.500 - CDS 920195 - 920587 586 ## COG0251 Putative translation initiation inhibitor, yjgF family 840 475 Op 6 4/0.350 - CDS 920580 - 921290 990 ## COG1335 Amidases related to nicotinamidase 841 475 Op 7 . - CDS 921290 - 922381 1523 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 922527 - 922586 5.4 + Prom 922587 - 922646 2.3 842 476 Tu 1 . + CDS 922667 - 923305 988 ## COG1309 Transcriptional regulator 843 477 Tu 1 . - CDS 923302 - 923697 575 ## COG3755 Uncharacterized protein conserved in bacteria 844 478 Tu 1 . - CDS 924738 - 928700 6177 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase - Prom 928945 - 929004 3.1 845 479 Tu 1 . + CDS 929122 - 930630 2121 ## COG0591 Na+/proline symporter + Term 930648 - 930680 5.4 + Prom 930647 - 930706 5.2 846 480 Tu 1 . + CDS 930765 - 931199 554 ## KPK_3514 putative lipoprotein + Term 931205 - 931236 5.5 - Term 931193 - 931224 5.5 847 481 Tu 1 . - CDS 931231 - 932415 1804 ## COG1972 Nucleoside permease - Prom 932619 - 932678 5.2 + Prom 932493 - 932552 3.9 848 482 Op 1 7/0.088 + CDS 932686 - 933516 1269 ## COG0672 High-affinity Fe2+/Pb2+ permease 849 482 Op 2 9/0.035 + CDS 933571 - 934695 1746 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 850 482 Op 3 3/0.442 + CDS 934700 - 935983 1592 ## COG2837 Predicted iron-dependent peroxidase + Term 935987 - 936023 4.4 851 483 Tu 1 . + CDS 936488 - 937276 689 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase + Term 937288 - 937332 11.3 - Term 938052 - 938086 7.4 852 484 Op 1 2/0.500 - CDS 938093 - 938770 983 ## COG1335 Amidases related to nicotinamidase 853 484 Op 2 . - CDS 938789 - 939649 1118 ## COG1741 Pirin-related protein - Prom 939680 - 939739 1.9 + Prom 939683 - 939742 3.0 854 485 Tu 1 . + CDS 939764 - 940669 867 ## COG0583 Transcriptional regulator + Term 940792 - 940831 -0.9 855 486 Tu 1 . - CDS 940858 - 941304 118 ## Kvar_3327 TetR family transcriptional regulator - Prom 941414 - 941473 1.6 856 487 Tu 1 . - CDS 941525 - 942388 440 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family - Prom 942430 - 942489 2.3 - TRNA 942914 - 943001 68.6 # Ser GGA 0 0 + Prom 943136 - 943195 5.1 857 488 Tu 1 3/0.442 + CDS 943270 - 944208 1290 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 944216 - 944249 4.5 + Prom 944218 - 944277 3.5 858 489 Op 1 5/0.235 + CDS 944297 - 945034 936 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 859 489 Op 2 . + CDS 945057 - 945611 741 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Prom 945613 - 945672 2.1 860 490 Tu 1 . + CDS 945715 - 946197 585 ## Kvar_3322 hypothetical protein + Term 946219 - 946249 4.3 + Prom 946223 - 946282 3.7 861 491 Op 1 . + CDS 946350 - 946877 538 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 862 491 Op 2 . + CDS 946944 - 947537 516 ## COG1309 Transcriptional regulator + Term 947576 - 947613 -0.1 863 492 Tu 1 . - CDS 947572 - 948732 1460 ## Kvar_3319 acyltransferase 3 - Prom 948927 - 948986 2.2 + Prom 948886 - 948945 4.7 864 493 Op 1 7/0.088 + CDS 949002 - 950537 1831 ## COG3131 Periplasmic glucans biosynthesis protein 865 493 Op 2 4/0.350 + CDS 950560 - 953058 3222 ## COG2943 Membrane glycosyltransferase + Term 953072 - 953113 9.0 866 494 Tu 1 . + CDS 953125 - 953352 381 ## COG5645 Predicted periplasmic lipoprotein + Term 953426 - 953458 -0.8 867 495 Op 1 . - CDS 953353 - 953739 539 ## Kvar_3315 hypothetical protein - Term 953793 - 953826 1.0 868 495 Op 2 5/0.235 - CDS 953831 - 955069 1530 ## COG0477 Permeases of the major facilitator superfamily - Prom 955118 - 955177 4.4 - Term 955192 - 955234 7.1 869 496 Tu 1 . - CDS 955240 - 956160 1058 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 956266 - 956325 2.9 + Prom 956139 - 956198 5.6 870 497 Tu 1 . + CDS 956366 - 957430 1184 ## COG1054 Predicted sulfurtransferase + Term 957549 - 957580 2.4 - Term 957375 - 957410 3.0 871 498 Op 1 . - CDS 957416 - 957529 119 ## - Term 957537 - 957568 2.4 872 498 Op 2 . - CDS 957602 - 958720 894 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 958777 - 958836 2.8 - Term 958776 - 958815 5.0 873 499 Tu 1 . - CDS 958847 - 959101 199 ## Kvar_3309 biofilm formation regulatory protein BssS - Prom 959166 - 959225 4.9 - Term 959326 - 959353 1.5 874 500 Op 1 . - CDS 959406 - 959657 409 ## KP1_2061 DNA-damage-inducible protein I 875 500 Op 2 . - CDS 959731 - 960777 1322 ## COG0418 Dihydroorotase - Prom 960825 - 960884 2.2 - Term 960866 - 960898 5.0 876 501 Tu 1 . - CDS 960903 - 961463 897 ## Kvar_3306 hypothetical protein 877 502 Tu 1 . - CDS 961579 - 962787 1546 ## COG0477 Permeases of the major facilitator superfamily + Prom 962825 - 962884 5.2 878 503 Op 1 5/0.235 + CDS 963016 - 963600 989 ## PROTEIN SUPPORTED gi|16764523|ref|NP_460138.1| ribosomal-protein-S5-alanine N-acetyltransferase 879 503 Op 2 4/0.350 + CDS 963610 - 964263 801 ## COG3132 Uncharacterized protein conserved in bacteria 880 503 Op 3 5/0.235 + CDS 964266 - 965189 716 ## COG0673 Predicted dehydrogenases and related proteins + Term 965253 - 965282 3.5 + Prom 965222 - 965281 2.0 881 504 Tu 1 . + CDS 965301 - 966836 1038 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 + Term 966853 - 966901 10.3 - Term 966849 - 966882 6.1 882 505 Tu 1 . - CDS 966890 - 968104 1459 ## COG0477 Permeases of the major facilitator superfamily - Prom 968176 - 968235 2.3 + Prom 968086 - 968145 1.6 883 506 Tu 1 . + CDS 968214 - 969149 963 ## COG0583 Transcriptional regulator + Term 969154 - 969182 2.1 - Term 969140 - 969168 2.1 884 507 Tu 1 . - CDS 969187 - 972426 3431 ## COG1530 Ribonucleases G and E + Prom 972814 - 972873 3.0 885 508 Tu 1 . + CDS 973084 - 974079 192 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Term 974086 - 974117 4.1 886 509 Tu 1 . - CDS 974117 - 974701 616 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 974811 - 974870 2.8 + Prom 974652 - 974711 4.6 887 510 Op 1 20/0.000 + CDS 974843 - 975364 342 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 888 510 Op 2 14/0.013 + CDS 975381 - 975554 291 ## PROTEIN SUPPORTED gi|152969641|ref|YP_001334750.1| 50S ribosomal protein L32 + Term 975637 - 975664 -0.8 889 511 Op 1 16/0.000 + CDS 975695 - 976855 817 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 890 511 Op 2 14/0.013 + CDS 976910 - 977863 1027 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 891 511 Op 3 26/0.000 + CDS 977879 - 978808 1104 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 892 511 Op 4 22/0.000 + CDS 978821 - 979555 267 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 979593 - 979622 1.2 + Prom 979668 - 979727 4.9 893 511 Op 5 27/0.000 + CDS 979766 - 980002 346 ## COG0236 Acyl carrier protein + Term 980014 - 980047 6.1 894 511 Op 6 5/0.235 + CDS 980092 - 981333 1203 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 981365 - 981393 1.3 + Prom 981337 - 981396 3.3 895 512 Op 1 6/0.119 + CDS 981459 - 982268 641 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 896 512 Op 2 10/0.027 + CDS 982279 - 983292 1306 ## COG1559 Predicted periplasmic solute-binding protein 897 512 Op 3 22/0.000 + CDS 983282 - 983923 799 ## COG0125 Thymidylate kinase 898 512 Op 4 10/0.027 + CDS 983920 - 984924 1055 ## COG0470 ATPase involved in DNA replication 899 512 Op 5 6/0.119 + CDS 984935 - 985729 875 ## COG0084 Mg-dependent DNase + Term 985778 - 985817 9.1 + Prom 985871 - 985930 4.8 900 513 Tu 1 . + CDS 986026 - 987459 1728 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 987482 - 987512 3.0 + Prom 987591 - 987650 4.1 901 514 Op 1 4/0.350 + CDS 987721 - 988077 544 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 902 514 Op 2 6/0.119 + CDS 988082 - 988456 392 ## COG5633 Predicted periplasmic lipoprotein 903 514 Op 3 6/0.119 + CDS 988469 - 989116 803 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 904 514 Op 4 5/0.235 + CDS 989097 - 989924 230 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 905 514 Op 5 2/0.500 + CDS 989936 - 990958 1087 ## COG1472 Beta-glucosidase-related glycosidases 906 514 Op 6 2/0.500 + CDS 990994 - 991536 779 ## COG3150 Predicted esterase + Term 991558 - 991593 3.4 + Prom 991684 - 991743 7.7 907 515 Tu 1 . + CDS 991781 - 993085 1740 ## COG1252 NADH dehydrogenase, FAD-containing subunit + Term 993099 - 993139 8.0 + Prom 993196 - 993255 2.1 908 516 Tu 1 . + CDS 993278 - 993817 551 ## COG3134 Predicted outer membrane lipoprotein + Term 993840 - 993879 3.1 909 517 Tu 1 . - CDS 993875 - 996064 2761 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 996158 - 996217 5.1 910 518 Tu 1 . - CDS 996309 - 996944 799 ## COG1309 Transcriptional regulator - Prom 996974 - 997033 7.5 + Prom 997017 - 997076 7.2 911 519 Tu 1 . + CDS 997194 - 997451 289 ## KPN_01110 hypothetical protein + Term 997533 - 997574 11.3 - Term 997528 - 997555 1.5 912 520 Tu 1 . - CDS 997580 - 998539 1186 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 998585 - 998644 5.8 - Term 998655 - 998696 11.1 913 521 Tu 1 . - CDS 998703 - 1002149 4381 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 1002329 - 1002388 1.8 + Prom 1002368 - 1002427 5.7 914 522 Op 1 23/0.000 + CDS 1002454 - 1003653 1388 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 915 522 Op 2 23/0.000 + CDS 1003646 - 1004347 197 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 916 522 Op 3 5/0.235 + CDS 1004347 - 1005591 1544 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 917 522 Op 4 5/0.235 + CDS 1005640 - 1006551 1081 ## COG1940 Transcriptional regulator/sugar kinase 918 523 Op 1 . + CDS 1006665 - 1007396 986 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 919 523 Op 2 . + CDS 1007487 - 1007831 368 ## KPN_01118 hypothetical protein - Term 1007793 - 1007834 -0.8 920 524 Op 1 . - CDS 1007856 - 1008818 1065 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 921 524 Op 2 . - CDS 1008854 - 1009648 678 ## COG0149 Triosephosphate isomerase - Prom 1009734 - 1009793 7.7 + Prom 1009735 - 1009794 5.3 922 525 Op 1 3/0.442 + CDS 1009891 - 1010898 392 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 923 525 Op 2 . + CDS 1010934 - 1012652 1473 ## COG3395 Uncharacterized protein conserved in bacteria + Term 1012673 - 1012726 1.4 + Prom 1012664 - 1012723 3.1 924 526 Op 1 . + CDS 1012745 - 1013764 1141 ## Kvar_3257 2-keto-3-deoxygluconate permease 925 526 Op 2 . + CDS 1013766 - 1014140 126 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 926 526 Op 3 . + CDS 1014169 - 1014627 636 ## COG0698 Ribose 5-phosphate isomerase RpiB 927 526 Op 4 13/0.013 + CDS 1014658 - 1015608 1200 ## COG0176 Transaldolase + Prom 1015678 - 1015737 80.3 928 527 Op 1 . + CDS 1015848 - 1016321 631 ## COG0021 Transketolase 929 527 Op 2 . + CDS 1016336 - 1017793 2003 ## COG0021 Transketolase 930 528 Op 1 . + CDS 1018735 - 1020024 1197 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 931 528 Op 2 . + CDS 1020021 - 1021745 1737 ## Kvar_3251 hypothetical protein + Term 1021831 - 1021865 0.4 - Term 1021747 - 1021785 6.0 932 529 Op 1 25/0.000 - CDS 1021790 - 1022836 1657 ## COG0687 Spermidine/putrescine-binding periplasmic protein 933 529 Op 2 36/0.000 - CDS 1022833 - 1023618 1075 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 934 529 Op 3 30/0.000 - CDS 1023615 - 1024472 1501 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 935 529 Op 4 . - CDS 1024456 - 1025574 288 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 1025668 - 1025727 4.0 + Prom 1025710 - 1025769 3.0 936 530 Tu 1 . + CDS 1025850 - 1027082 1678 ## COG2195 Di- and tripeptidases 937 531 Tu 1 . + CDS 1027249 - 1027740 371 ## COG1943 Transposase and inactivated derivatives - Term 1027941 - 1027987 1.0 938 532 Op 1 2/0.500 - CDS 1027996 - 1029117 1389 ## COG2850 Uncharacterized conserved protein - Prom 1029142 - 1029201 3.1 939 532 Op 2 40/0.000 - CDS 1029203 - 1030669 2136 ## COG0642 Signal transduction histidine kinase 940 532 Op 3 . - CDS 1030669 - 1031340 1147 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1031374 - 1031433 4.8 + Prom 1031361 - 1031420 3.0 941 533 Op 1 1/0.633 + CDS 1031624 - 1032430 742 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 1032433 - 1032492 1.7 942 533 Op 2 . + CDS 1032514 - 1032876 586 ## COG0662 Mannose-6-phosphate isomerase + Term 1032896 - 1032942 -0.6 - Term 1032884 - 1032925 12.1 943 534 Op 1 9/0.035 - CDS 1032931 - 1034301 1902 ## COG0015 Adenylosuccinate lyase 944 534 Op 2 4/0.350 - CDS 1034305 - 1034946 738 ## COG2915 Uncharacterized protein involved in purine metabolism 945 534 Op 3 6/0.119 - CDS 1035001 - 1036107 1714 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 946 534 Op 4 3/0.442 - CDS 1036164 - 1036622 560 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 947 534 Op 5 . - CDS 1036639 - 1037259 706 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 1037281 - 1037340 5.8 + Prom 1037287 - 1037346 3.6 948 535 Tu 1 . + CDS 1037530 - 1038780 1749 ## COG0538 Isocitrate dehydrogenases + Term 1038794 - 1038848 11.8 - Term 1038792 - 1038824 5.0 949 536 Tu 1 . - CDS 1038893 - 1039381 -23 ## COG0582 Integrase - Prom 1039457 - 1039516 1.7 950 537 Op 1 . - CDS 1040668 - 1040919 231 ## Kvar_1775 hypothetical protein 951 537 Op 2 . - CDS 1040934 - 1041398 371 ## KPK_4168 hypothetical protein 952 538 Tu 1 . - CDS 1041526 - 1042311 534 ## KP1_2152 hypothetical protein 953 539 Tu 1 . - CDS 1042504 - 1043031 321 ## COG1896 Predicted hydrolases of HD superfamily - Prom 1043104 - 1043163 2.0 - Term 1043118 - 1043147 1.2 954 540 Op 1 . - CDS 1043169 - 1043999 673 ## COG5532 Uncharacterized conserved protein 955 540 Op 2 . - CDS 1044052 - 1044372 419 ## EpC_20790 hypothetical protein + Prom 1045127 - 1045186 2.3 956 541 Tu 1 . + CDS 1045301 - 1045774 -113 ## KP1_2158 hypothetical protein + Term 1045874 - 1045909 1.6 - Term 1046011 - 1046037 -1.0 957 542 Tu 1 . - CDS 1046067 - 1046573 -49 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 1046725 - 1046784 4.5 + Prom 1046677 - 1046736 5.8 958 543 Op 1 . + CDS 1046814 - 1047014 244 ## ECS88_2907 DNA-binding transcriptional regulator 959 543 Op 2 . + CDS 1047059 - 1047610 111 ## KP1_2161 hypothetical protein + Term 1047655 - 1047694 2.1 960 544 Op 1 . + CDS 1047783 - 1047962 117 ## gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 961 544 Op 2 . + CDS 1047952 - 1048878 224 ## KP1_2163 hypothetical protein 962 544 Op 3 . + CDS 1048875 - 1049333 92 ## KP1_2164 hypothetical protein 963 545 Tu 1 . + CDS 1049501 - 1050703 196 ## KP1_2165 hypothetical protein + Term 1050832 - 1050876 0.4 964 546 Op 1 . + CDS 1051779 - 1052546 148 ## COG0270 Site-specific DNA methylase 965 546 Op 2 . + CDS 1052543 - 1053019 193 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 966 546 Op 3 . + CDS 1053016 - 1053414 73 ## COG4570 Holliday junction resolvase 967 547 Tu 1 . + CDS 1053777 - 1054325 -43 ## KP1_2169 hypothetical protein + Term 1054411 - 1054442 -0.8 + Prom 1054923 - 1054982 3.3 968 548 Op 1 . + CDS 1055217 - 1055393 153 ## KP1_2170 hypothetical protein 969 548 Op 2 . + CDS 1055412 - 1056242 107 ## KP1_2171 putative prophage antitermination protein + Term 1056327 - 1056354 -0.9 - Term 1056368 - 1056428 7.3 970 549 Tu 1 . - CDS 1056446 - 1057243 -63 ## KP1_2172 hypothetical protein - Prom 1057328 - 1057387 6.4 + Prom 1057302 - 1057361 5.4 971 550 Tu 1 . + CDS 1057541 - 1058371 789 ## KP1_2173 hypothetical protein - Term 1058764 - 1058792 1.0 972 551 Tu 1 . - CDS 1058799 - 1059047 164 ## KPN_pKPN3p05991 hypothetical protein - Term 1059157 - 1059188 1.5 973 552 Tu 1 . - CDS 1059206 - 1059568 316 ## ESA_03064 hypothetical protein - Prom 1059651 - 1059710 5.5 + Prom 1059627 - 1059686 5.3 974 553 Op 1 . + CDS 1059877 - 1060272 194 ## Kvar_2091 hypothetical protein 975 553 Op 2 . + CDS 1060259 - 1060540 101 ## Kvar_2092 hypothetical protein 976 553 Op 3 . + CDS 1060540 - 1061169 317 ## COG3179 Predicted chitinase 977 553 Op 4 . + CDS 1061172 - 1061447 194 ## KP1_2178 hypothetical protein 978 553 Op 5 . + CDS 1061362 - 1061601 144 ## ECL_01681 hypothetical protein + Prom 1061629 - 1061688 2.1 979 554 Tu 1 . + CDS 1061758 - 1061970 158 ## + Prom 1062223 - 1062282 5.8 980 555 Tu 1 . + CDS 1062403 - 1062648 277 ## Kvar_2099 hypothetical protein + Term 1062650 - 1062700 -0.3 981 556 Tu 1 . + CDS 1062984 - 1063223 79 ## + Term 1063247 - 1063277 -0.5 982 557 Tu 1 . + CDS 1063397 - 1063690 176 ## ESA_01023 hypothetical protein + Prom 1063693 - 1063752 2.1 983 558 Tu 1 . + CDS 1063961 - 1065151 306 ## ECL_01682 hypothetical protein 984 559 Tu 1 . - CDS 1065755 - 1065919 56 ## - Prom 1066135 - 1066194 2.9 + Prom 1066076 - 1066135 3.4 985 560 Op 1 2/0.500 + CDS 1066274 - 1066783 169 ## COG3728 Phage terminase, small subunit 986 560 Op 2 . + CDS 1066787 - 1068445 1266 ## COG4626 Phage terminase-like protein, large subunit + Term 1068463 - 1068492 1.2 987 561 Op 1 . + CDS 1068504 - 1070438 899 ## Ent638_2238 peptidase U35, phage prohead HK97 988 561 Op 2 . + CDS 1070477 - 1070644 65 ## Ent638_2237 hypothetical protein + Prom 1070853 - 1070912 2.9 989 562 Op 1 . + CDS 1071007 - 1072002 282 ## COG4695 Phage-related protein 990 562 Op 2 . + CDS 1071999 - 1072556 414 ## Ent638_2235 hypothetical protein + Prom 1073061 - 1073120 80.4 991 563 Op 1 . + CDS 1073307 - 1073564 146 ## Ent638_2235 hypothetical protein 992 563 Op 2 . + CDS 1073561 - 1073887 190 ## Ent638_2234 hypothetical protein - Term 1074012 - 1074048 0.3 993 564 Tu 1 . - CDS 1074119 - 1074196 107 ## - Prom 1074409 - 1074468 4.4 994 565 Tu 1 . + CDS 1074998 - 1075360 232 ## PP_1572 hypothetical protein + Term 1075389 - 1075415 -0.7 + Prom 1075362 - 1075421 4.9 995 566 Tu 1 . + CDS 1075650 - 1075907 178 ## PLES_25521 hypothetical protein 996 567 Op 1 . + CDS 1076087 - 1076617 185 ## Kvar_1809 KilA, N-terminal/APSES-type HTH DNA-binding domain protein + Term 1076629 - 1076655 -1.0 997 567 Op 2 . + CDS 1076664 - 1077017 233 ## PLES_25531 hypothetical protein 998 567 Op 3 . + CDS 1077050 - 1077313 194 ## PLES_25541 hypothetical protein 999 567 Op 4 . + CDS 1077379 - 1077846 -56 ## gi|262044695|ref|ZP_06017747.1| conserved hypothetical protein + Term 1077853 - 1077881 3.0 1000 568 Op 1 . + CDS 1080338 - 1080817 100 ## KPN_01430 alkanesulfonate ABC transporter membrane protein 1001 568 Op 2 . + CDS 1080804 - 1081286 256 ## CKO_01850 hypothetical protein 1002 568 Op 3 . + CDS 1081296 - 1081676 353 ## Kvar_2119 hypothetical protein 1003 568 Op 4 . + CDS 1081673 - 1084691 1047 ## KPN_01432 putative kinase Predicted protein(s) >gi|289776635|gb|GG745509.1| GENE 1 163 - 966 1134 267 aa, chain + ## HITS:1 COG:ECs0203 KEGG:ns NR:ns ## COG: ECs0203 COG0656 # Protein_GI_number: 15829457 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 267 1 267 267 473 91.0 1e-133 MAIPAFGLGTFRLKDDVVIASVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPRDELF ITTKIWIENLSKDKLIASLKESLQKLRTDYVDLTLIHWPSPNDAVPVEEFMAALMEAKKL GLTRQIGISNFTIPLMERAIAAVGAENIATNQIELSPYLQNRKVVDWAREHGIHITSYMT LAYGKALKDEVIARIAAKHGATPAQVILAWAMGEGYAVIPSSTKRDNLASNLKAQDLQLD DEDRKAIAALDCNDRLVSPEGLAPQWD >gi|289776635|gb|GG745509.1| GENE 2 1012 - 1917 707 301 aa, chain - ## HITS:1 COG:STM0256 KEGG:ns NR:ns ## COG: STM0256 COG0583 # Protein_GI_number: 16763639 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 297 1 297 304 501 85.0 1e-142 MRATSEEIAIFVAVVESGSFSRAAEQLGQANSAVSRAVKKLESKLGVSLLNRTTRQLSLT EEGERYFRRMQVVLQEMAAAENDLLETRTTPRGLLRVDAATPVMLHFLMPLVKPFRERYP EMTLSLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLFTSYRKIVASPDYVARYGMPQ HPSDLKQHHCLGFTEPVSLNTWPVSCCDGQLLEIESAVSSNSGETLKQLCLTGNGIACLS DYMVDKEIASGEFVELLADKRLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKQLPKEL S >gi|289776635|gb|GG745509.1| GENE 3 2022 - 3212 1505 396 aa, chain + ## HITS:1 COG:STM0257 KEGG:ns NR:ns ## COG: STM0257 COG2814 # Protein_GI_number: 16763640 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 387 1 387 391 547 88.0 1e-155 MPLALFALTIGAFAIGTTEFVIVGLVPTIAQQLSISLPSAGLLVSIYALGVAIGAPVLTA LTGRMPRKQLLLALMVLFTAGNVLAWQAPGYETLILARLLTGLAHGVFFSIGSTIATSLV AKEKAASAIAIMFGGLTVALVTGVPFGTFIGQHFGWRETFLAVSILGVIALISSLLLVPN NIPGRASASLRDQMKVLTHPRLLMIYAITALGYGGVFTAFTFLAPMMQELAGFSPSAVSW ILLGYGVSVAIGNVWGGKLADKHGAVSALKFIFAALVVLLLVFQLTASIHYAALATVLVM GIFAFGNVPGLQVYVVQKAEQYTPGAVDVASGLNIAAFNIGIALGSIVGGQTVERYGLAQ TPWIGAVIVLVALLLVMLSGRLDKSPRRSTAVSLEG >gi|289776635|gb|GG745509.1| GENE 4 3335 - 4111 677 258 aa, chain + ## HITS:1 COG:STM0258 KEGG:ns NR:ns ## COG: STM0258 COG3021 # Protein_GI_number: 16763641 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 258 1 258 259 464 88.0 1e-131 MRYVAGQPAERILPPGAFAGVSPVYPAGTPLSSDEKIRVLVWNIFKQQRAEWQSVLKNFG KDAHLVLLQEAQTTPELVRFATSNYLAADQVPALVLPQHPSGVMTLASAHPIYCCPLRER EPILRLPKSALVTVYPLPDARLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIM AGDFNAWSRPRMNALYRFAREMSLREVRFSDDQRRRAFGRPLDFVFYRGLSVHDASVLVT RASDHNPLLVEFSPGKPD >gi|289776635|gb|GG745509.1| GENE 5 4199 - 4969 953 256 aa, chain + ## HITS:1 COG:STM0259 KEGG:ns NR:ns ## COG: STM0259 COG0500 # Protein_GI_number: 16763642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 389 78.0 1e-108 MTTRSHHDNVEKQFGSQASAYLTSAVHASGRDLQRLAERLADFPQAKVLDMGCGAGHASF TAAGQVAEVTAYDLSSQMLEVVTAAAKEKGFSNIVTQQGYAETLPFADASFDVVISRYSA HHWHDVGQALREVKRVLKPGGVMIIMDVMSPGHPVRDVWLQTVEALRDTSHVRNYSSGEW LALANDAGLVINHLSTDRLPLEFSSWVARMRTPEALVEAIRLYQQSASAEVKAYFELQQD GSFTSDTILFEAHKAV >gi|289776635|gb|GG745509.1| GENE 6 5028 - 6395 548 455 aa, chain - ## HITS:1 COG:STM0260 KEGG:ns NR:ns ## COG: STM0260 COG0741 # Protein_GI_number: 16763643 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 455 1 455 455 770 87.0 0 MKARAILLASVLLVGCQASKHDGTVEQRAQSLSAAGQGEAGKFTSQARWLDDGTFYAQDQ DLWTSIGDELKMGIPDNPRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPME LVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRSYDARRDVVASTTAALDMM QRLNKMFDGDWLLTVAAYNSGEGRVMKAVKANRSRGKPTDFWSLSLPHETKIYVPKMLAL SDILKNSKRYGVKLPTADESRALARVRLDSPVDISQLADMAGMPVSKLKTFNAGVKGSTL GASGPKYVMVPQKHAAQLRESLASGDIAAVQPTQLADNTPLTSRSYKVRSGDTISGIASR LGVTTRDLQQWNNLRGSGLKVGQSLVVGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRH GVNIRDVMRWNSDTDNLRPGDQLTLFVKNSDRPES >gi|289776635|gb|GG745509.1| GENE 7 6467 - 7222 329 251 aa, chain - ## HITS:1 COG:STM0261 KEGG:ns NR:ns ## COG: STM0261 COG0491 # Protein_GI_number: 16763644 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Salmonella typhimurium LT2 # 1 251 1 251 251 406 74.0 1e-113 MNLISIPAFQDNYIWVLSENNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVG GVKQLREKFPSIVVYGPAETQDKGVTQVVGDGDRLSILGHDFSIFSTPGHTLGHICYYSE PYLFCGDTMFSGGCGRLFEGTAEQMYQSFMKINALPEETLICCAHEYTLANMKFALSILP DDRDINDYYHKVNELRAKKQKTLPVTLKNERRINLFLRVNDIDLIDKINQETNLQHSVAR FAWLRSKKDDF >gi|289776635|gb|GG745509.1| GENE 8 7255 - 7977 781 240 aa, chain + ## HITS:1 COG:ECs0209 KEGG:ns NR:ns ## COG: ECs0209 COG0500 # Protein_GI_number: 15829463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 239 7 245 246 390 76.0 1e-108 MKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTEAC AISHQVNVSLAGNPMQVRADPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLIDD GWMILTGFNPVSLMGLRKLVPFLRNGTPYNSRMFTLMRQLDWLSLLNFEVLHYGRYQVLP WSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKGQN >gi|289776635|gb|GG745509.1| GENE 9 7974 - 8441 498 155 aa, chain - ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 1 154 1 154 155 285 90.0 3e-77 MLKQVEIFTDGSCLGNPGPGGYGAIMRYRQHEKTFSAGYRLTTNNRMELMAAIVALEALK EHCEVVLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKNVDLWQRLDAALGQHKIKWEW VKGHAGHPENERCDELARAAASHPTQDDIGYQPES >gi|289776635|gb|GG745509.1| GENE 10 8497 - 9237 927 246 aa, chain + ## HITS:1 COG:STM0264 KEGG:ns NR:ns ## COG: STM0264 COG0847 # Protein_GI_number: 16763647 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 4 246 1 243 243 447 89.0 1e-126 MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRL VDPEAFGVHGIADEFLLDKPTFADVADEFMDYIRGAELVIHNASFDIGFMDYEFGKLNRG IGKTETFCKITDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILADVYLM MTGGQTSMAFSMEGESQQQAGEMGIQRVVRAASQLRVVYASDEELVNHESRLDLVQKKGG SCLWRA >gi|289776635|gb|GG745509.1| GENE 11 9507 - 10388 790 293 aa, chain - ## HITS:1 COG:STM2644 KEGG:ns NR:ns ## COG: STM2644 COG0583 # Protein_GI_number: 16765964 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 299 449 79.0 1e-126 MDLRRFITFKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQELAIPLFEKIGRRMCLTAA GKNVLPHVYDLTKVMASIRQAARQDDEPGGELRVATGETLLAYKMPPVLQRFKQRAPKVR LSLQSLNCYSIRDALLADEVDLGVFYRVGNDDALTMMELGPQPLALVASVDQAPVDFLRP RQHIPLSFIINEPQCVFRQIFESTLRQRGITMENTIELWSIESIKQCVAGNLGVSFLPRF AVEEELKRRTLVELPFSETPLTIHALCAHHAGKAISPAMRVFMQCMQEEQEAR >gi|289776635|gb|GG745509.1| GENE 12 10492 - 11082 594 196 aa, chain + ## HITS:1 COG:yfiK KEGG:ns NR:ns ## COG: yfiK COG1280 # Protein_GI_number: 16130503 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 194 1 194 195 237 67.0 8e-63 MTPTLISAFLTYTLITALTPGPNNILALSSVTAHGFRRSMRVLAGMSLGFVIIMLICAGL TFTLVSLDEGITSLLRWVGAGYILWLAWHIARSDPASGGQEERPVSFWASLGLQFVNVKI ILYGITALSTFVLPVTREPFWLVMISLLLSVIGVAGNLCWALAGHLFQPVFERHGRGLNL LLALLLVWCAVRMFME >gi|289776635|gb|GG745509.1| GENE 13 11111 - 12211 1459 366 aa, chain - ## HITS:1 COG:SMa0665 KEGG:ns NR:ns ## COG: SMa0665 COG0628 # Protein_GI_number: 16262804 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Sinorhizobium meliloti # 23 356 60 390 413 188 36.0 1e-47 MDNNNLLLIEKRLVTRFLDMFIRFGLILALASFCFTVFSPFINMMLWALILAVALYPLHQ YFAGLLAGKQGLASVVLVLLGILLIVIPTVLMITSLAESASAMIDKMGSQSFTIPPPSSR IAALPIIGERLSALWMRASVDLPGLLSNYRSQIGDIAKQFLSILASMGGGLIGFIISFIV SGIMMAWGAAGAISAQRIAIRITDENKGVTLTRLCTSTIRAVAQGVIGVALIQALLVGVI MLMASIPAVGIFFILALILGIAQVPVILVTAPAIALMWSLGTHSTGMDIFYTILMIVAGM ADNVLKPLLLGRGVDAPMPVVLLGALGGMASNGILGMFLGATLLAIGYRIFMTWVNEGQP ALPQDK >gi|289776635|gb|GG745509.1| GENE 14 12460 - 13251 839 263 aa, chain - ## HITS:1 COG:ECs0246 KEGG:ns NR:ns ## COG: ECs0246 COG0388 # Protein_GI_number: 15829500 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 8 262 1 255 256 454 84.0 1e-128 MRMELTIVPGLKITLLQQPLVWMDGPANLRHFDRQLEGIIGRDVIVLPEMFTTGFAMEAA KQSLPEADVVEWMHARAAQTQALIAGSAALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRM ADEHHHYEAGDRRVVFEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHW QSLLVARAIENQAYVAGCNRVGTDGNGHHYRGDSRIISPQGEIVATADPHQATRLDAELS LTALQEYREKFPAWRDADPFTLG >gi|289776635|gb|GG745509.1| GENE 15 13407 - 15914 3143 835 aa, chain - ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 20 835 11 826 826 1553 91.0 0 MHYNQYITSGQTSYKLREHFSMMILSIVATVVLLGALFYHRVSLLLSSVILLAWTAALGA AGVWNIWLLLPLAIILLPFNFAPMRKSMISAPAFRAFRKVMPPMSRTEKEAIDAGTTWWE GDLFRGNPDWHKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFAITHEMADLPPELWAYL KEHRFFAMIIKKEYGGLEFSAYAQARVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTE EQKNHYLPRLARGLEIPCFALTSPEAGSDAGAIPDTGVVCMGDWQGQQVLGMRLTWNKRY ITLAPIATVLGLAFKLSDPDRLLGGEEELGITCALIPTSTPGVEIGRRHFPLNVPFQNGP TRGKDIFVPIDYIIGGPSMAGQGWRMLVECLSVGRGITLPSNATGGLKSVAMATGAYAHI RRQFKISIGKMEGIEEALARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRG QRSIIDAMDITGGKGIMLGEGNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPY VLEEMAAAQNNDLNAYDKLLFKHIGHVGSNKVRSFWLGLTGGRTSSAPTRDATRRYYQQM NRLSANLALLSDVSMAVLGGSLKRRERISARLGDVLSQLYLASAVLKRYDDEGRNEADLP LVHWGVQDALHQAEQAIDDLLKNFPNRLVAGAMRVAIFPTGRHHHAPSDKLDHKVAKILQ VPSATRSRIGRGQYLTPSEHNPVGLLEEALLEVMAADPIHQRICKELGKNLPFTRLDELA HNALAKGLINQEEAAILTRAEHSRLRSINVDDFAPEELATKPVKLPEKVRKVEAA >gi|289776635|gb|GG745509.1| GENE 16 16091 - 16672 874 193 aa, chain + ## HITS:1 COG:STM0310 KEGG:ns NR:ns ## COG: STM0310 COG0279 # Protein_GI_number: 16763693 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Salmonella typhimurium LT2 # 1 192 1 192 192 357 93.0 9e-99 MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGIST SGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKVIH ILIMLIEKEMVKG >gi|289776635|gb|GG745509.1| GENE 17 16747 - 17514 1030 255 aa, chain + ## HITS:1 COG:yafJ KEGG:ns NR:ns ## COG: yafJ COG0121 # Protein_GI_number: 16128209 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Escherichia coli K12 # 1 255 1 255 255 511 92.0 1e-145 MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFQSPI AKLVQDYPIKSCSVVAHIRQANRGMVALENTHPFTRELWGRNWTYAHNGQLKGYKSLKTG NFHPVGETDSEKAFCWLLHRLTERYPRTPGNMLGVFKYIATLAGELREKGVFNMLLSDGR YVMAFCSTNLHWITRRAPFGVAKLLDQDVEIDFQRETTPNDVVTVIATQPLTANETWHKI MPGEWALFCLGERVV >gi|289776635|gb|GG745509.1| GENE 18 17485 - 18225 986 246 aa, chain - ## HITS:1 COG:ECs0251 KEGG:ns NR:ns ## COG: ECs0251 COG3034 # Protein_GI_number: 15829505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 444 88.0 1e-125 MRKIALFIAMLLLPCVSFAGLLSSNSPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVK MGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYSVTRSQLKPDSRFYKAINIGFPNA YDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFGQPSVQVSIYPFRMTN ANMERHKYSYYADFWKQLKPGYDYFQQTHKPPIVSVTDGRYVVSKPLSHEVVQPQLASNY TLPETK >gi|289776635|gb|GG745509.1| GENE 19 18751 - 19980 1398 409 aa, chain + ## HITS:1 COG:YPO3240 KEGG:ns NR:ns ## COG: YPO3240 COG1726 # Protein_GI_number: 16123399 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Yersinia pestis # 1 409 39 447 447 617 73.0 1e-176 MRPAMAVKEGDRVKKGQILFEDKKTPGVYFTAPASGVVSAIHRGERRVLQSVVIDIEGND AVAFTRYAADALAELPRDTVQQQLLASGLWTALRTRPFSKTPRPGSVPAAIFVNAMDTNP LAAEPQPIILAERAAFDAGLTVLTRLTDGKVHVCQPSGGKLGGHPAGQVCFNQFSGPHPA GLPGTHIHFLEPVSLHKQVWHLNYQDAIAIGQLFLEGELNCERVIALGGPQVKSPRLVKT TLGASLDDLLAGELEEGENRVISGSVLSGTRAHGPHAFLGRFHLQVSVVREGREKELFGW VMPGKEKFSITRTTLGHFFKRKRFHFSTDTNGGERAMVPIGNYERVMPLDILPTILLRDL LAGDSDSAQALGCLELDEEDLALCTYVCPGKYEYGPVLRSVLTQIEQEG >gi|289776635|gb|GG745509.1| GENE 20 19984 - 21222 1854 412 aa, chain + ## HITS:1 COG:YPO3239 KEGG:ns NR:ns ## COG: YPO3239 COG1805 # Protein_GI_number: 16123398 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Yersinia pestis # 1 412 1 412 413 652 83.0 0 MGLKHLIEKLEPHFTHGGKLEKYYPLYEAAATIFYTPGQVTRGAAHVRDAIDLKRMMILV WFAVFPAMFWGMYNVGLQTIPALHKLYGAEQLQQVIANNWHYSVAQWLGVSFSADAGWLS MMTLGAVFFLPIYITVFIVGGFWEVLFAIVRKHEINEGFFVTSILFALIVPPTLPLWQAA LGISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGFSGATPLSQ WASGGGEALVNVATGIPVSWMDAFLGNIPGSIGEVSTLMILIGGAIILFGRVASWRIVAG VMIGMISTATLFNVIGSDTNPMFSMPWYWHLVLGGFAFGMMFMATDPVSASFTDKGKWSY GVLIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDYLVVQANIKRRKSRG >gi|289776635|gb|GG745509.1| GENE 21 21215 - 22009 943 264 aa, chain + ## HITS:1 COG:YPO3238 KEGG:ns NR:ns ## COG: YPO3238 COG2869 # Protein_GI_number: 16123397 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Yersinia pestis # 5 264 7 266 266 348 70.0 7e-96 MAEKKSNDSIGKTLLVVLVLCLVCSIVVAGSAVGLKSRQQAQRALDKQRNILAVAGLIQP GMDADAVAETFAARISPRLVNLATGELLEKDPAKFNQAQALKDPQQSIALDASQDPAGIK RRSNLAEIYLVRDAQQQIEQMVLPIYGNGLWSMMYAFVALDVDGRTVKGITYYDQGETPG LGGEVENPNWRQQFIGKQVLDDNGMPALRVVKGGARAGDLHAVDGLSGATLTSNGVQHSF DFWMGELGFGPFLKKVREGGLNNG >gi|289776635|gb|GG745509.1| GENE 22 22002 - 22640 938 212 aa, chain + ## HITS:1 COG:YPO3237 KEGG:ns NR:ns ## COG: YPO3237 COG1347 # Protein_GI_number: 16123396 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Yersinia pestis # 5 212 2 209 209 328 85.0 6e-90 MAEQSDMKEVKRVLVGPLIANNPIALQVLGVCSALAVTTKLETAFVMTIAVTLVTAFSSM FISMIRHHIPNSVRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLIITNCIVMGR AEAYAMKSPPLASFMDGIGNGLGYGAILIIVGFLRELIGSGKLFGITVLETVQNGGWYQP NGLFLLAPSAFFIIGLLIWALRSWKPEQQEKE >gi|289776635|gb|GG745509.1| GENE 23 22644 - 23243 1081 199 aa, chain + ## HITS:1 COG:YPO3236 KEGG:ns NR:ns ## COG: YPO3236 COG2209 # Protein_GI_number: 16123395 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Yersinia pestis # 2 199 1 198 198 300 91.0 1e-81 MMAHYISLFVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGVAVTVVLGLAVPINNLV YNLVLRDGALVEGVDLSFLNFITFIGVIAALVQILEMILDKYFPALYNALGIFLPLIAVN CAIFGGVSFMVQRDYNFPESIVYGFGSGIGWMLAIVAMAGIREKMKYANVPAGLRGLGIT FITTGLMALGFMSFSGVQL >gi|289776635|gb|GG745509.1| GENE 24 23256 - 24479 1601 407 aa, chain + ## HITS:1 COG:YPO3235 KEGG:ns NR:ns ## COG: YPO3235 COG2871 # Protein_GI_number: 16123394 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Yersinia pestis # 1 407 1 407 407 681 84.0 0 MEIILGVVMFTLIVLVLSGLILAARSKLVNAGDVVIEINNEADKQIRTPAGDKLLNTLSS NGIFVSSACGGGGSCGQCRVTIKEGGGDILPTELSHITKREAKEGCRLACQVAVKQNMKI ELPEEIFGVKKWECEVISNDNKATFIKELKLRVPDGEAVPFRAGGYIQIECPSHKVAYAD FDIPDEYRSDWDKFNLFRYVSEVKEPTLRAYSMANYPEEKGIIMLNVRIATPPPKVPDAP PGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHS TRKISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDPLPEDNWTGHTGFIHNVLYE NYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIMLDDFGG >gi|289776635|gb|GG745509.1| GENE 25 24482 - 24697 372 71 aa, chain + ## HITS:1 COG:YPO3233 KEGG:ns NR:ns ## COG: YPO3233 COG2991 # Protein_GI_number: 16123392 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 68 1 68 75 105 73.0 3e-23 MLTVFVATFVIFALVILGMSLGYLVKRKSIQGSCGGISSLGLEKVCDCPEPCDARKKRLA REAQRQQRRIL >gi|289776635|gb|GG745509.1| GENE 26 25872 - 26732 1062 286 aa, chain - ## HITS:1 COG:YPO3232 KEGG:ns NR:ns ## COG: YPO3232 COG0584 # Protein_GI_number: 16123391 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Yersinia pestis # 11 283 18 305 315 301 56.0 9e-82 MKKRLTALCLLAASSALANPQLIAHRGGTGDAPENTLPAIKLALENHAEAIWVTVQLSRD GVPILYRSSDLSALTNAEGKVSSLTAAELAKVDAGWKWGDDSHPWRGKQATIPTLQSVLQ QWPHTFFYIDIKSPDADPAVMGERLLAVLKATDSLDRVRVYSTDDRYIAALPSAIPRFVT RSETRTKLATISLSHQCQLSSQHEGEQWYGLELKRKVEVVEKFTLGEGISPATLTWDKEA MDCFRSQGKAHIIFFGINSAEDYRTAKELGADGVMVDSPAQAKSWQ >gi|289776635|gb|GG745509.1| GENE 27 26893 - 27948 1168 351 aa, chain + ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 351 1 351 351 637 88.0 0 MRKIIHVDMDCFFAAVEMRDNPALRDIPLAIGGSRVQRGVISTANYPARKFGVRSAMPTA TALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVSDSVHCHGSAT LIAQEIRQTIERELHLTASAGVAPVKFLAKIASDMNKPNGQFVIAPHQVAEFVRALPLAK IPGVGKVSAAKLENMGLRTCGDVQNSDLAMLLKRFGKFGRILWERSHGIDEREIHNDRQR KSVGVERTLAEDIHEWSACEAIIENLYPELERRLAKVKPDLLIARQGIKLKFNDFQLTTQ EHVWPRLNKEDLIATAHKAWDERRGGRGVRLVGLHVTLLDPQLERQLLLGI >gi|289776635|gb|GG745509.1| GENE 28 27951 - 28403 376 150 aa, chain + ## HITS:1 COG:ECs0261 KEGG:ns NR:ns ## COG: ECs0261 COG0454 # Protein_GI_number: 15829515 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 146 4 147 150 154 52.0 6e-38 MHIRAYRDSDLPLLCQIFLRAVQETASRDYTPAQIAAWAQVDETRWRQKLADSIGRVAVV NNQPVGFITAIGTHIDLLFVSPDHARQGIGGALIEALCAQYPAQILTVDASITAKPCFTA HGFKVVAEQRVAARGEWFINYRMEKRVALR >gi|289776635|gb|GG745509.1| GENE 29 28446 - 29903 1846 485 aa, chain - ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 485 1 485 485 911 91.0 0 MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIMGWAKEKGLHAERDQVGNILIRKG ATAGMENRKPVALQAHLDMVPQKNNDTVHDFAKDPIQPYIDGEWVKARGTTLGADNGIGM ASALAVLADDSVAHGPLEVLLTMTEEAGMDGAFGLQANWLQADILINTDSEEEGEIYMGC AGGIDFTSNLALTREAIPAGFQSFKVTLKGLKGGHSGGDIHLGLGNANKLLSRFLAGHAD ELDLRLVDFNGGTLRNAIPREAYATVAVAADKADALKALVNTYQALLKNELEAKEKNLVV LLEAVDNDKAALTQTSRDGFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDDNVQI HCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFN KTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGQYWTLLTELLK AIPAK >gi|289776635|gb|GG745509.1| GENE 30 30161 - 30619 662 152 aa, chain + ## HITS:1 COG:ECs0265 KEGG:ns NR:ns ## COG: ECs0265 COG0503 # Protein_GI_number: 15829519 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 300 97.0 4e-82 MSEKYVVTWDMLQIHARKLASRLLPVEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCI SSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRP LVDDYVVDIPQDTWIEQPWDMGVVFVPPIAGR >gi|289776635|gb|GG745509.1| GENE 31 30725 - 31969 1266 414 aa, chain + ## HITS:1 COG:STM0318 KEGG:ns NR:ns ## COG: STM0318 COG1073 # Protein_GI_number: 16763700 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 1 413 1 413 414 723 82.0 0 MSQANLSETLFKPRFKHPETSTLVRRLSAGKPQAMQSALSGNHVDHWYRLINRLMWIWRG VTPQEILDVQARIVMSEAERTDPELFDTVIGYRGGNWIFEWAKEAMQWQQKAGQEADPLL SGRHWLHASNLYSIAAYPHIKGDELAEQAQALANRAYEEAAQRLPGSLRELEFTIPGGSP ITGFLHMPKGDGPFPTVLMCGGLDSLQTDYYNLYENYFSPLGIAMLTIDMPSIGFSSKWT LNQDTSLLHQHALRHLENVPWVDHTRVAAFGFRFGANIAVRLGYLEPQRLKAVACLGPVV HGLLVDPLHQGRVPEMYLDVLASRLGMHDASDEALRVELNRYSLKTQGLLGRRCPTPMLS GFWKDDPFSPEEESRLITSSSADGKLLEIPFNPVYRNFDHALRQIARWINHRFG >gi|289776635|gb|GG745509.1| GENE 32 32027 - 32425 495 132 aa, chain + ## HITS:1 COG:no KEGG:KPK_4480 NR:ns ## KEGG: KPK_4480 # Name: crl # Def: DNA-binding transcriptional regulator Crl # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 132 1 132 132 263 100.0 1e-69 MTLPSGHLKSKLIKKFTALGPYIREEQCHDNRFFFDCLAVCVNVKPAPEKREFWGWWMEM EAQESRFTYSYQFGLFNKEGSWQAVDIDDPEVSERLEKTLREFHERAAALLTTFNLKLEP ADDFSEPVRLRA >gi|289776635|gb|GG745509.1| GENE 33 32511 - 33203 980 230 aa, chain - ## HITS:1 COG:STM2794 KEGG:ns NR:ns ## COG: STM2794 COG1802 # Protein_GI_number: 16766105 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 363 86.0 1e-100 MTAIPQATAIDGYRWLKNDIIRGVYQPDEKLRMSLLTSRYELGVGPLREALSQLVAERLV TVVNQKGYRVAPMSEQELLDIFDARANMEAMLVRLAIERGGDEWEAELLARAHLLNKLES CDASERLLDEWDQRHQAFHTAIVAGCGSQYLLQMRERLFDLAARYRFIWLRTTVLSVEML EDKHVQHQTLLDAILARDAERASALMREHLLTPIPIIQQAMAGKLSPQAG >gi|289776635|gb|GG745509.1| GENE 34 33249 - 34649 1969 466 aa, chain - ## HITS:1 COG:gabP KEGG:ns NR:ns ## COG: gabP COG1113 # Protein_GI_number: 16130577 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 466 1 466 466 774 93.0 0 MGQLSQSQDLGAGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVM IMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAIILHSW VPGVPVWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIVLGAVAITGFYPY AEVSGISRLWDHGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPDKHIVRATNS VIWRISIFYLCSIFIVVALIPWNMPGLKSIGSYRSVLELLHIPYAKLIMDGVILLSVTSC LNSALYTASRMLYSLSRRGDAPAIMGRTNRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVF KFLIDSSGAIALLVYLVIAVSQLRMRKILQAQGGEIRLRMWLYPYLTWLVIAFITFVLVV MLFRPAQQLEVISTGLLALGIICTVPIMSRWKKLVLWQKLPLQNTR >gi|289776635|gb|GG745509.1| GENE 35 34785 - 36068 1739 427 aa, chain - ## HITS:1 COG:gabT KEGG:ns NR:ns ## COG: gabT COG0160 # Protein_GI_number: 16130576 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 426 1 426 426 769 89.0 0 MNSNKAMMARRSDAVPRGVGQIHPIFAERAENCRVWDVEGREYLDFAGGIAVLNTGHLHP QVVAAVEDQLKKLSHTCFQVLAYEPYLALCEKMNQKVPGDFAKKTLLVTTGSEAVENAVK IARAATGRSGAIAFTGAYHGRTHYTLSLTGKVNPYSAGMGLMPGHVYRALYPCALHGVSD DEAIASIHRIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE VQSGAGRTGTLFAMEQMGVAADITTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAG NPIACAAALAVLQIFEQENLLEKANQLGDTLRQGLLAIAEDHPEIGDVRGLGAMIAIELF EEGDRSKPNARLTADIVARARDKGLILLSCGPYYNVLRILVPLTIEEAQIEQGLKIIADC FTEAKQA >gi|289776635|gb|GG745509.1| GENE 36 36081 - 37529 2142 482 aa, chain - ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 482 1 482 482 875 91.0 0 MQLNDMTLFRQQALIDGQWRDAPNGDVIAVTNPANGEQLGSVPKMGADETREAIEAANRA LPAWRALTAKERANILRRWFDLMMENQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA EEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK PASQTPFSALALAELANRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG VYDRFAEKLQQAVEKLRIGDGLQDGVTTGPLIDEKAVAKVEEHIADAIAKGAKVVTGGKP HALGGNFFQPTILVNVPDSAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA RDLSRVFRVGEALEYGIIGINTGIISTEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCI GL >gi|289776635|gb|GG745509.1| GENE 37 37553 - 38821 1682 422 aa, chain - ## HITS:1 COG:ygaF KEGG:ns NR:ns ## COG: ygaF COG0579 # Protein_GI_number: 16130574 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 1 422 23 444 444 769 88.0 0 MYDFVIIGGGIIGMSTAMQLIEIYPDARIALLEKETGPACHQTGHNSGVIHAGVYYTPGS LKAQFCLAGNRATKAFCEQNGIRYDVCGKMLVATSPLEMERMRALWDRTAANGLQREWLS AGELREREPNITGLGGIFVPSSGIVSYRDVAAAMAKIFESKGGTIVYDAEVSALKEHASG VVIRTRQGAEYEASTLIACSGLMADRLVKMLGVDPGFIICPFRGEYFQLAPQHNQIVNHL IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKREGYRKRDISLADTLEILTSPGIRR VLQNNLRSGLGEMKNSLCRSGYLRLVQKYCPSLTLSDLHPWPAGVRAQAVSPQGKLIDDF LFVTTARSIHTCNAPSPAATSAIPIGAHIVSKVQTLLESQSNPGRTLRAARSVETLHAAF TR >gi|289776635|gb|GG745509.1| GENE 38 38849 - 39826 1138 325 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4129 NR:ns ## KEGG: Kvar_4129 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 325 1 325 325 661 100.0 0 MNALTAVKPTPAPLAQPYPGFSIAPSAQSPRLLELTFSAETTTQFLQQVAQWPVQALEYK SFLRFQVGKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDNVSQAEEMVKLATAVAH LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEQTDYVLMMKIDE QNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVFHPVFDVDSLGRPV MRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINNLFWLHGRDRFTPH PDLRRELMRQRGYFAYSTNHYQTHQ >gi|289776635|gb|GG745509.1| GENE 39 40288 - 40545 377 85 aa, chain + ## HITS:1 COG:STM4501 KEGG:ns NR:ns ## COG: STM4501 COG3811 # Protein_GI_number: 16767745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 85 1 85 85 129 91.0 1e-30 MNLSRQEQRTLHVLAKGGRIAHVRDTSGRITAVECYTREGLLLNDCTLAVFKKLKTKKLI KSVNGQPYRINTTGLNNVRAQADNR >gi|289776635|gb|GG745509.1| GENE 40 40603 - 41352 1063 249 aa, chain + ## HITS:1 COG:yjhP KEGG:ns NR:ns ## COG: yjhP COG0500 # Protein_GI_number: 16132127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 2 249 1 248 248 381 73.0 1e-106 MIDIPRIFTISESEHRIHNPFTPEKYATLGRALRMAPGTAILDLGSGSGEMLCSWARDHQ IVGTGVDMSLLFSQQATARAEALGVSDRVTFVHQDASGYVASQPCDIAACVGATWIGGGV AGTIALLKQSLRPGGMLLIGEPWWRKRPATAEEAVACGAQTPDDFLTLPALVAHFGELGY DVVEMVLADHEGWDRYEAAKWLTMRRWLEANPHDDFAPEVRQQLTTAPLHHVTWTREYLG WGVFVLMAR >gi|289776635|gb|GG745509.1| GENE 41 41393 - 42031 672 212 aa, chain - ## HITS:1 COG:CC2647 KEGG:ns NR:ns ## COG: CC2647 COG0625 # Protein_GI_number: 16126882 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Caulobacter vibrioides # 1 211 1 210 215 172 43.0 3e-43 MLTIWGRKTSSNVQALMWCVGELGLDYLRFDVGHRYGGTDSEAFYQLNPNRTVPVLQDGD NPPLWETGAILRYLASRYADDAFWPGDLLARTEVDRWAEWSKQNIALGFTAPVFWRVVRT PAAERDPQAIAAAVMALEQKLAIAEARLAGSRYLVGDTLTLADIQFGHVLYRYFAIDITR RPLPHLAAYYARLTARPAFRQHVMVSYDELKV >gi|289776635|gb|GG745509.1| GENE 42 42249 - 43511 1105 420 aa, chain - ## HITS:1 COG:Z4877 KEGG:ns NR:ns ## COG: Z4877 COG3775 # Protein_GI_number: 15804015 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 EDL933 # 2 408 20 428 462 298 40.0 1e-80 MDIINSIISLGASVMMPVIFFIIALCFGVKIGTAFKAGMLVGIGFEGVGLVIGLLLTNLG PASQAMVERIGLQLTVVDTGWPTASTIGWGSPLMLPVVVGFIVINLAMLLLKLTKTVNID IFNYWIFLIMGSVVYAGTGNYWLSVGITFAIFVLTLLAADLTAPYLQKNYNLKGISFPHL TCIAYVPFGIACNYIIDKIPLINKINFDPESINKKFGVFGEPLTLGFVLGLLLAFLAGYD VSAAVSLAIKVSAAMLLLPRMIEILVQGLLIVRDAAEAKLKAKFPGRDFYIGMDTALLIG EPSVLATGLLLIPMAVVLSIILPGNRVLPFVDLASLMFLLAMVTPFCKRNMFRMFITGAL IVTCILYVGTDISQEYTQAAVNSHIPVPEGMAEITNIVGGATTPVGWLAVKFGEFFSATP >gi|289776635|gb|GG745509.1| GENE 43 43600 - 44595 912 331 aa, chain - ## HITS:1 COG:SMc01622 KEGG:ns NR:ns ## COG: SMc01622 COG0111 # Protein_GI_number: 15965987 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Sinorhizobium meliloti # 56 324 57 330 345 204 42.0 1e-52 MKCLAIADLFINAAMMESGLKALRDKGIEVEVREWSHDSVEKLQEDNLRVEQEGAEAVAL PEALLQGTDDIDILITQFAPVNTAVFDKLPKLKYVGVLRGGVENVNLQVANARGVEVMNT PGRNARSVAEFTVGMILAEMRNIARSHDALRDKYWRKDSPNHQAIPELGGKVVGLVGLGH IAQLVAGFLSGFGTEIIFYDKYVAGHERYEKVDSLDELVQRADVISLHARLTPETENLIN AHHFALMKRSAIIVNTARSGLINEKEMIDALRSGQIMGAALDTFDDEPLPDDSEFYTLNN VTITPHIAGSTIDAFSNSPKLFAEILLKKLS >gi|289776635|gb|GG745509.1| GENE 44 44612 - 45373 897 253 aa, chain - ## HITS:1 COG:BH2491 KEGG:ns NR:ns ## COG: BH2491 COG1028 # Protein_GI_number: 15615054 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus halodurans # 5 252 2 246 246 160 36.0 2e-39 MDLNLTNRTAIVTGGATGLGKEFVLSLAKEGVNICFTYMREEECPERLIETVKASANVKI IAVKTDLSDEQSRENLFATCIDRLGKADILVNNAGIWLSGYVTEISPQDWDLVMNVNLKA IFHLSQLFVNHCLQHDQMGSILNITSQAAFHGSTTGHAHYAASKAGLVAFAISLAREVAK QKINVNNIAVGIMDTAMIRKNIEQNPDYYVSRIPVGRVAQPQEIADIGVFMVSPKTSYMT GATLDVTGGMLMR >gi|289776635|gb|GG745509.1| GENE 45 45386 - 45565 173 59 aa, chain - ## HITS:1 COG:no KEGG:KPK_4467 NR:ns ## KEGG: KPK_4467 # Name: not_defined # Def: carbohydrate kinase, FGGY family # Organism: K.pneumoniae_342 # Pathway: Pentose and glucuronate interconversions [PATH:kpe00040]; Ascorbate and aldarate metabolism [PATH:kpe00053] # 1 59 454 512 512 131 100.0 1e-29 MVGWFAEVFAASNDMVHVSRTVSPNPENHRVYQTKYQLYKNLLSEMQSPWKSCSNYIAH >gi|289776635|gb|GG745509.1| GENE 46 45492 - 46922 1112 476 aa, chain - ## HITS:1 COG:PM1247 KEGG:ns NR:ns ## COG: PM1247 COG1070 # Protein_GI_number: 15603112 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Pasteurella multocida # 5 454 3 439 483 349 39.0 7e-96 MKDEYVMGIDNGGTVTKAAIYDRKGQVLAIASKSTQMLTPQEFHTERSIDELWAANVEVI KKAIEQSGIDASQIKGVAVTGHGNGLYLVDEEGHPVRNGIISTDSRAKEYVERWQRSPEF LTDILPKTMQSIWAGQPVALLAWLKDFEPETLQKAHYIFMVKDLIRFYLTGEAFLELTDI SGTNLINVRDCKYDDELLAWWGLDELRDKLPPIKRSTECCGKITDDVARLTGLCAGTPVS GGVFDISASSIASGINSLDKMAIVTGTWSINEYVTDHPVIDKDLFMTSIYPIEGKWLITE ASPTSASNLEWFINNFMESDRKTSAEQGSSVYDLCNKLVSSTTPDESHLLFFPFVFGSNT IPDASAGFIGVNSFHKKAHFLRAIYEGVAFSHLYHTERLRNINPKLSRTIRIAGGVTNSP VWLQIFADIFQATLEIVDVKEHGTLGTAMSRRHGGLVCRGICCLKRHGPCLTHRLP >gi|289776635|gb|GG745509.1| GENE 47 46943 - 47494 371 183 aa, chain - ## HITS:1 COG:TM1431 KEGG:ns NR:ns ## COG: TM1431 COG1954 # Protein_GI_number: 15644182 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Thermotoga maritima # 7 183 20 192 195 101 33.0 7e-22 MISNNTIIPSIRKYKYFEKALSCQSEYVLLSEANIGNLQSLIGKCHQSGKKVLVHLELLG GFKPDQAGINLLKNYYKVDGVISSNLSALRYAKKEGLITVYRVLLIDSRSLDQSLDIVKH SPPDAIEILPAEYACQCLELISRNLKGFDVVFIAGGFVKRKYLVDKIFHAGFKGITTSEP GLW >gi|289776635|gb|GG745509.1| GENE 48 47509 - 48300 503 263 aa, chain - ## HITS:1 COG:aq_1554 KEGG:ns NR:ns ## COG: aq_1554 COG1830 # Protein_GI_number: 15606691 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Aquifex aeolicus # 1 259 3 262 264 114 28.0 2e-25 MSKERRLSRIFAKDGKSVTLALDGYYFSTKTNGIDNTINQLPALVEHGLDCALVTYGMLK NYREALNSVPVVLRVDSTVSIFDNTVPDTTPVFSVEDALKVAAEGVVCMTFPGAFNEEKT HIMAMQLAQAADRWNVPLIVESLPYGYPVTSDDSNNPAIIAASARAAVELGADVIKTRFT GSPEDRLIVEAAGVPVLALGGPKTGIDGYFKFVQHCMQMGAKGVAVGRNITQDPQPAKVV AGLNAIIHENATAEDAYSLYMAK >gi|289776635|gb|GG745509.1| GENE 49 48817 - 49068 263 83 aa, chain - ## HITS:1 COG:no KEGG:KP1_1115 NR:ns ## KEGG: KP1_1115 # Name: not_defined # Def: Zn-finger protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 83 1 83 83 144 98.0 2e-33 MTQHERFCQACGMPMSAPDAQGASDKYCAYCSDSDGNLKSWEEAVSGLAAFLDAWQKVGV AESRKRAKRYLTAMPAWAHKADE >gi|289776635|gb|GG745509.1| GENE 50 49246 - 50643 1104 465 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 464 4 457 458 429 46 1e-118 MHDNYDVLIIGGGPGGYVAAIRAGQLGLRTALVEKQHLGGICLNWGCIPTKALLHGAEVA HSITHASQLGISVGEVNVDLQKLVQFSRAVSQQLTGGVEYLLKKNGVRVIDGTARLRGKG QITVADARGEAHDYRADHVILATGARPRALPGIEPDGEYIWTYYEALQPKLLPRSLLIIG SGAIGVEFASLYNDLGCKVTLVELASQILPVEDAEVSAAVRKSFEKRGIQVHTQTQVTQV QLTDTGVRCTMKNTSAESFLEVERVLLAVGVQPNIEDLGLEALGVELDRGFIKTDTACRT NVFGLYAIGDVAGPPCLAHKASHEGVICIETLAGVEGTHPLDRDYVPGCTYSRPQVASLG LTESTALARGRPVRIGKFSYQSNGKALASGETEGFVKTIFDAETGELLGAHMVGAQVTEQ IQGFGIARHLEATDESLLSMIFAHPTLSEAMHESILAACDHPLHQ >gi|289776635|gb|GG745509.1| GENE 51 50633 - 52168 686 511 aa, chain - ## HITS:1 COG:RC0764 KEGG:ns NR:ns ## COG: RC0764 COG0508 # Protein_GI_number: 15892687 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Rickettsia conorii # 216 504 127 412 412 234 43.0 3e-61 MSEIKTLEMPKWGLSMEEGLLARWAIQEGDDFTRGQEICEIETSKIVNVLEAPFAGTLRR IIAREGETLQVGAVLALVADASVSDAELDEFAASLATVKPAAPDPEAAAPDVAAQAGAKP PSVVSPPSNSPEPPIGQTVIPVSLQGVTDVTQVNATPHALRLSARWGVDLKKVRGSGRGE RISVSDLESAIVAAGGRLASPTPPVRPSKAPRSHADDSQVSATPLARRLAGKLGINLHDC RSSGSRGRVSRDDVLAAALLLDGHPPVSPVQESAPTPFESIPMSGMRRAIASRLQTSKQQ SPHFRLSVDLDLERLLAFRQEINREVPGVKISVNDLLVKACALALVAVPDVNIQFDEATQ SIRRFADADISVAVALPDGLITPIVRSANRKSISDISAEIHALVTRAKAGTLKPEEFQGG TFSVSNLGMLGVRQFDAIINPPQSAILAIGTGEMRAVVRDGQIVARHQLTISLSCDHRVI DGAAGAAFLRELKRLTETPTLMFIQETSYAR >gi|289776635|gb|GG745509.1| GENE 52 52172 - 53191 837 339 aa, chain - ## HITS:1 COG:PA4151 KEGG:ns NR:ns ## COG: PA4151 COG0022 # Protein_GI_number: 15599346 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Pseudomonas aeruginosa # 5 338 6 334 339 382 59.0 1e-106 MTIKTYREAVKEALAQEMERDERVVLIGEDLRGGHGGNAPEEAKIEAFGGVLGVTKGLWT QFGSDRVIDTPITESAIIGMAAGAAATGLRPVAELMFMDFFGVSHDALYNQAAKFRYMFG GKARAPLVMRGMIGAGFSAAAQHSQSPYNIFATTPGLKVVVPSTPYDVKGLLIQSIRDDD PVVFCEHKMLYDLKGEVPDEIYTIPLGVANYTREGEDVTIIALSAMVHKANQVADKLARE GISVEVVDPRTISPLDEEGILESVASTGRVVIVDESAARFGFAHDVAALIASQAFHFLKA PVLLVTPPHTPVPFSPALEKLWIPGVERIEAAVRQVLED >gi|289776635|gb|GG745509.1| GENE 53 53203 - 54162 716 319 aa, chain - ## HITS:1 COG:PA4150 KEGG:ns NR:ns ## COG: PA4150 COG1071 # Protein_GI_number: 15599345 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Pseudomonas aeruginosa # 2 319 4 323 324 339 59.0 5e-93 MLSKQALLQAYRKMREIRTFEERLHQENTSGDIPGFIHLYTGEEAIAVGVCENLTSADFI GSTHRGHGHCIAKGCDIHGMMAEIFGKDSGLCRGKGGSMHIADLSKGMLGANAIVGGAPP LAIGAALTAKTLKTGNVGVSFTGDGGSNQGLVFEAINMAVVLQLPAVFIFENNGYGEGTG HDYAVGGRDIARRAAGFGLPAVTVDGTDFFAVYEATSEAVKRAREGGGPSVIEAKAFRWH GHFEGDPALYRAEGEVQRLREQHDPLKIFTAKVKQHITQEELAAIDEEVEALVNDAVLKA RAAAYPAPEDLLTDVYVSY >gi|289776635|gb|GG745509.1| GENE 54 54254 - 54448 70 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGDLLNPMASSVVSTRFVFFQLYASHRDDMGQANFMATQNLESLTSSMKTPTYPPMKVA SHSL >gi|289776635|gb|GG745509.1| GENE 55 54526 - 54741 103 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|330005639|ref|ZP_08305317.1| ## NR: gi|330005639|ref|ZP_08305317.1| hypothetical protein HMPREF9538_03001 [Klebsiella sp. MS 92-3] hypothetical protein HMPREF9538_03001 [Klebsiella sp. MS 92-3] # 32 71 1 40 51 67 92.0 2e-10 MQQIRNKLPYVIIILIEAQPGDTFTLGDHLLMPLCQQRGFAKSSAGADDAQPALLNGTEK LKKPGALQQLY >gi|289776635|gb|GG745509.1| GENE 56 54655 - 57180 1070 841 aa, chain + ## HITS:1 COG:PA1760 KEGG:ns NR:ns ## COG: PA1760 COG2909 # Protein_GI_number: 15596957 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 840 69 904 907 223 25.0 2e-57 MVAQGERIAWLSLDEDDDDVWQFIPYLLQALRPLYADWDADFWRDMEEQKLSSSEQLLAG LINQLHYCPHDVYLIIDDFHVINDRGVYEAVGYLIKHAPAALHLIIGSRFHPNLALSQLQ AQDQLVEIYDRDLQFTLEETKHYFSRTVALPLSNHHAQRLQSVTEGWIAGMKIASLSAEL QHDPEHLLRNMHGGTRSIARYLKEVVLDPLPEEVLDFLVKTSFLSRLNAELCNAVTGRDD SKAMLAWIERHNLFLSALDEQGYWFRYHPLLQENLRTMLQQNNDIDRKQLHELASHWFVE QKLWSEAVRHALSAGKPVHSPVQDGASAQSLAEEGDIDTLISWMHHLPPSTDPSRIDLQI NLAWALAHYFHFDESRQLLDNLDQMVLHHREDLTRSTWCKLRVVRAICEAFAENIPESLA IVQPLLAEVPCGDTWVDGLICNILSYCHVVNQRYHDALEVQQHMPSPESPLDNLFVSVYR AFIIAQCHLCQGDLGKAGWYAEKTLRQAECYTGTQSTSGATLAPLLAEIAYECQSGDSPD HLLADRLEFIDRFSPPDALSRCYTYLARQALDGDMPYEAERLLEHAQRLAVSRGWQRLQA MMLAEQVRVRLQRGNVTGAEQLQRQLEQMAASFRMDAEHPCQRAIVLSASLSHCRLLLAR GQAPQACILLADMVPDQENRGDRLTAARLRTLWSLALWNSGKTAAARTTFQPVVQLAEQQ YLKGLFLEAGDTLQPLLAGMNETSSACTEEGIVHEPWAGKRAPADGTPFNSGSPDIHGEL SEREFQILQLIAEGQMNKEIARSLAISAETVKWHIKNIYAKLKVNSRTQAMSRALEMKLL D >gi|289776635|gb|GG745509.1| GENE 57 57352 - 58068 351 238 aa, chain - ## HITS:1 COG:RSc0213 KEGG:ns NR:ns ## COG: RSc0213 COG0518 # Protein_GI_number: 17544932 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Ralstonia solanacearum # 3 223 4 233 238 177 46.0 2e-44 MARPLAIIQMGDPPAVIRQEAGEQSRWFVQVLALNRGEYRVFRPDRHELLPAIDTICGAI ISGSWAMVTDRLAWSEETAQWIRLAHALNLPLLGVGYGHQLIAHALGGLVADNPQGSEHG LQLIQIAENSTAPLLTTCPGRFAAWLSHRQTVLRPPEGASVLAFSTRDVCQILRYSDTAY SVQFHPEFTWDIMAACLKQCGEGLEMAEMSGEPAWPQELLRRFYYLWCKDNAPRLCQS >gi|289776635|gb|GG745509.1| GENE 58 58070 - 59764 1532 564 aa, chain - ## HITS:1 COG:YPO3371 KEGG:ns NR:ns ## COG: YPO3371 COG0155 # Protein_GI_number: 16123520 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Yersinia pestis # 5 561 14 570 576 828 67.0 0 MSNDEFSDNERLKQQSQLLRGTIKEDLHNELTGGFLGDNFQLIRFHGMYQQDDRDIRQER AAQMLEPLHTVMLRVRLPGGIISPQQWLGIDEFASQHTLYGSIRITNRQALQLHGVLKRN IKPVHRLLHQLGLDSRATAGDVNRNVLCTSNPVESRLHHQAYEWAKKISEHLLPKTNAYA EVWLDGEKIAQPEEEPILGNNYLPRKFKTAVVIPPQNDVDLHANDLNFIAIGDNGQLTGF NVLVGGGLAMTHGDQSTYPRLATELGYIPLNATLAVATAVVATQRDLGNRANRRNAKTKY TIDRLGIEVFKAEVELRAGLAFQPLRPYAFSSRGDRIGWVEGIDGKHHLTLFIPSGRLID KPGKPLKSGLAAIAAVHTGDFRLTPNQNIIIAGVSERNRAQIDALAQRYSLIDDTVSPQR KSAMACVSYPTCPLAMAEAERVLPDIVDRLDAILIRNGIADRDVIFRVTGCPNGCGRAML AEIGLVGRAVGRYDIYLGGNREGTRIPRLYKENQPLEEIIRDLDALLSAWAQADNPDEAF GDFAIQTGIIRPVLNSSIDFYLQD >gi|289776635|gb|GG745509.1| GENE 59 60053 - 60400 204 115 aa, chain - ## HITS:1 COG:no KEGG:KPK_4456 NR:ns ## KEGG: KPK_4456 # Name: not_defined # Def: transcriptional regulator, AraC family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 115 1 115 115 182 100.0 5e-45 MQHHVQLSDSIISNSQTLVNSAIQYIYQNIKNNISVYDISEYLQVSRQYVHRIFKKQTGM TVNTFISHKKIEYAMMDIILGIEDADSAYLKYNFKSKHAFINQIQHLYPYHSCLT >gi|289776635|gb|GG745509.1| GENE 60 60618 - 61571 694 317 aa, chain - ## HITS:1 COG:PA2332 KEGG:ns NR:ns ## COG: PA2332 COG2207 # Protein_GI_number: 15597528 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 5 297 9 301 301 207 37.0 2e-53 MLNSEWLLDNLSIENSVFHVGKYCGSWKGGTSGSGKASYHLVMEGHCWLHCAQHSSALRL EKGDMVFILQDCPFVLSSHENAQSAYRAPVQEMQPLTYKDETSTALACGFITFKTTISQM LLSFLPQVIVFKAQDDRSGSIGKLVAVINREATQTALRSEKLIASLTELLFFMVIRHYLS SHTVKTPLDNIPLTTEFLNLMAEIVLFPARPWTVEAMARASGLSRSWFIQRFNQVSPLSP AEIVRHIRIALACQHIAGGVSLTQSAERVGYLSQAAFNRAFQRITGVTPGRYSQQCRDNA AAQQFHGRNYLQINEIV >gi|289776635|gb|GG745509.1| GENE 61 61681 - 62232 472 183 aa, chain + ## HITS:1 COG:PA2331 KEGG:ns NR:ns ## COG: PA2331 COG2128 # Protein_GI_number: 15597527 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 183 1 183 186 189 54.0 2e-48 MTRITLQTLATAPEESKTYLENARRSSGFIPNLLLALSNSPQALQTYITVGAINNNNSLS AAERETVQLIAATVHGCGFCVAGHSATVEKKKIMPPADLQALRKRQPLPDPHLEAIASFA REVIATRGAVSEAAWQGFRAAGYGERQALDVILGVSLATLCNFANSLAQTPLNTELSPWA WSD >gi|289776635|gb|GG745509.1| GENE 62 62266 - 63324 847 352 aa, chain + ## HITS:1 COG:PA2330 KEGG:ns NR:ns ## COG: PA2330 COG1960 # Protein_GI_number: 15597526 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 349 1 349 355 280 51.0 3e-75 MLHHSLREWLDDRAAELDRSSELSHALLLKLAQANLFRIGIAPALGGSGGTLLDAIDAIS AVARHSLTAAFMFWGHRTYIDILTQAPQSALCDRILPDLLAGQLAGATGLSNAMKFLSGL EELQIGGVADGKGGWRLSGQLHWVTNLQTRGFQAVTVVQPVGGGEPFIASIGSGLAGVSR SADLALMAMQGSATAALHFDDVALEKDGVIHSAARTFLPAVRPRFLGLQCGMALGLAECI LDECRDRLSDGHVLRGEWQTLAQRYRQIRSDLYAGVESQRFVQQPGELFRLRIGLVELAI NGIQLELMLAGGRAYLSPQGDRTARRWRECAFLPLVTPSVVQLKQQLARLPA >gi|289776635|gb|GG745509.1| GENE 63 63321 - 64121 225 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 1 218 223 91 29 9e-17 MSVLLHASHLEVGYHRGQATTRLLQDFNFSLAENEIVAVVGASGVGKSSLLRILAGLEKP LAGEVNYLGQPLDGPHPHLSVAFQDPTLLPWRTLEQNVAFGLDFRHQPRLEAHERQERVR QAIASVGLITHLSKLPTQLSGGMAQRVALARCLARRPKVMLLDEPFSALDEVTRHDMQRL LIAVLNQHRMSALLITHDIDEALLVADRVILLGGAPGRLMGEWRPQIPHPRDNALEALAA LRLDILKKLRDVRADTDAEKRYVPDV >gi|289776635|gb|GG745509.1| GENE 64 64105 - 65295 973 396 aa, chain + ## HITS:1 COG:PA2328 KEGG:ns NR:ns ## COG: PA2328 COG0715 # Protein_GI_number: 15597524 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 1 396 1 399 399 460 61.0 1e-129 MCLMCDAMSRRDFLKLSALLSAGAALPLVMQQQARAAAEPDAPVRVGYLPIVDAAPLLVA HGLGLFDKAGVKAERPVMFRSWSQLTEAFIGGRVNVIHMLSPVTIWARYQAKLPAKVVAW NHTNGSALTVAPQISRVEELEGKTVAVPFWYSIHNVVLQQILRSAGLQTVTSAPGKKQVR LLVLSPADMVPALAAGQIQGFIVAEPFNALAETRHVGRILRFTGDVWQNHACCVVMMHES DLSMRPAWSQSVTDALVNAQQWIRQHRAETAQLLSHSDEHRYTPHDADVLRQVLLPTPAM QASWHKDGAIRHDAWHQQRIDFQPWPYASYFASLTDQLKQTVMEGNSDFLARLNGQQVAA DLVASDFVRQSIVRAGGMTAFGLPDGAFDREETIAP >gi|289776635|gb|GG745509.1| GENE 65 65292 - 66035 658 247 aa, chain + ## HITS:1 COG:PA2327 KEGG:ns NR:ns ## COG: PA2327 COG0600 # Protein_GI_number: 15597523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Pseudomonas aeruginosa # 15 239 16 242 254 197 61.0 1e-50 MKPILIRIGWALPGLALLLLIWGAITHFAGGMAGLFAPENALRSLQEMLAQGELVRNIAI SLSRVAVGLGLALIVGIPCGLLMGCSAASERLAMPALQFLRMISPLSWMPVAVMLLGIGD RPIWFLLSFAAVWPVLLNTASGVRQLPPGWLLLARSLSATRRETLWHIILPGVRAHILTG VRLAIGILWIVLVPCEMLGVSSGLGYAILDARDRLDYSALMAVIVTIGAIGFLMDWLARY FIHTVSA >gi|289776635|gb|GG745509.1| GENE 66 66919 - 68121 136 400 aa, chain + ## HITS:1 COG:Z5878_2 KEGG:ns NR:ns ## COG: Z5878_2 COG0582 # Protein_GI_number: 15804857 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 237 400 4 177 205 60 27.0 7e-09 MTYKRDRYLILDHCGVYMVRIVIPSYMKPYFNGKRYYMKSTATKDIRQARLFRDAVAVEF IKLREQLKPKQNGSKVEQIINELRDISNFAKESPVNYGANIERCPTLIQIRDLYLLQYSD KRKLTTLSKITKAVELILSHIKQRDSQLQDINRTVVTGWLDQLKKEKATQTLQNYISALA QLFDFAKNRYHDAPKDNPFRGHRLEAKSSHDSYEPFLISELSKVFELLNDEMKQVTLIGL YSGMRLNEICSLTIDDIVTEESVRCLRISKGKTKNAARLVPVHPSINGLIDTLIQNHTDK FLFRHAALTDRADGKRSTWHTQQFTRAKRKALGEKETERKVFHSLRGMFITELDRLKVPE DRIALLVGHERGSTESFKTYSQGASLKELAQYVKKVNFDL >gi|289776635|gb|GG745509.1| GENE 67 68647 - 69204 28 185 aa, chain + ## HITS:1 COG:no KEGG:E2348C_4606 NR:ns ## KEGG: E2348C_4606 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 185 118 300 300 186 49.0 5e-46 MPEFMTDLLQKAGGCDFRMAWKINPAQITKILSNVKSRILDWSLALESNGILGEGLLFSQ EERKEAAAMTVNNINNFNGNVHNAGAIGAGNTGDIHQQNSITSGDFNSLARQLKEHGLDD ADVIELEQLVKQTTKPGSKEEVEKGFGSWIGKITGKAFTGGLKIAGAAAPALLTNALCHY FNIPV >gi|289776635|gb|GG745509.1| GENE 68 69955 - 70203 170 82 aa, chain + ## HITS:1 COG:AGl1981 KEGG:ns NR:ns ## COG: AGl1981 COG1961 # Protein_GI_number: 15891106 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 82 165 246 250 91 58.0 3e-19 MMLDMLAAIARKDYTDRKRRQAQGIVKAKSDGKYKGRPEDTQRNERIAKLLQAGMSYTDV METVACSRATVAKVSKSLKELA >gi|289776635|gb|GG745509.1| GENE 69 70544 - 70906 178 120 aa, chain + ## HITS:1 COG:no KEGG:KPK_2127 NR:ns ## KEGG: KPK_2127 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 120 29 148 148 228 98.0 6e-59 MNKVKAVVFGVMMSAAITANAANETTTVTGEVGKDVKLSLESNPTTGYGWMIKDLPDGLI FVSGGYEQSKDCPKGAVGCGGEEVLHFIGEKKGESTLKLIYGRSFDKSSWQEKEVKVVIK >gi|289776635|gb|GG745509.1| GENE 70 72236 - 72415 117 59 aa, chain + ## HITS:1 COG:no KEGG:KPK_4418 NR:ns ## KEGG: KPK_4418 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 2 55 3 56 63 85 96.0 5e-16 MKKYFIVVAEKTHQFYMQYKSLSELTGITPPSGYTPPRMMTKTRRYEIIKAICQKTETP >gi|289776635|gb|GG745509.1| GENE 71 72607 - 73128 339 173 aa, chain + ## HITS:1 COG:no KEGG:KPK_4417 NR:ns ## KEGG: KPK_4417 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 173 1 173 173 306 97.0 3e-82 MNSPTQKRIEIESHFIPQIKAALENIEDAKDIYNADRLNKDTLIAVKTKQLMSQPVEDYG FRIRQVTHPAMVQTIIQNMMNENYVVYEMGAGFIKFVPLQQSPKHNPLAEIEKACKKAAE KFVDAGITEKANKVNKATHAHNVLVKQAEEALSGIKPLESYLSVIVADEVGND >gi|289776635|gb|GG745509.1| GENE 72 73121 - 73456 155 111 aa, chain + ## HITS:1 COG:no KEGG:KPK_4416 NR:ns ## KEGG: KPK_4416 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 111 8 118 118 164 97.0 1e-39 MTNKVTEAAYKAQIAALQAQLMQRHTVTAIDAVQPFCEAIGINPADYVKATSAMSNQHKA FCDGILKTASSKVTRLQRDATVRILEAQTKRNKAITAASEAIEVAQSMGGL >gi|289776635|gb|GG745509.1| GENE 73 73457 - 73642 82 61 aa, chain + ## HITS:1 COG:no KEGG:KPK_2124 NR:ns ## KEGG: KPK_2124 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 58 1 58 58 65 58.0 6e-10 MNHLFNAYGQLVRANVALNLHPFYLGKLERLANRIGDGIKSEEQRLILAIGEMLRNVETE Q >gi|289776635|gb|GG745509.1| GENE 74 73639 - 73854 100 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLYAFNPLKQNDKQEVLTPVSFNLVLSLPEQLLKRLDKVGYELVNRYGIAGCGDKQRHH IAIVHLLEKSA >gi|289776635|gb|GG745509.1| GENE 75 74491 - 75744 1998 417 aa, chain - ## HITS:1 COG:ECs0270 KEGG:ns NR:ns ## COG: ECs0270 COG0014 # Protein_GI_number: 15829524 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 696 86.0 0 MLEQMGIAAKAASWQLALLSSREKNQVLEKIADYLEAQTDDILRANAEDLAEARANGLSE AMLDRLALTPARLSGIANDVRQVCNLADPVGQVIDGGLLDSGLRIERRRVPLGVIGVIYE ARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVKVIQQALQECGLPAAAVQAIESPD RALVGEMLKMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIFVDETAEIAPALK IIVNAKTQRPSTCNTVETLLVHRNIADTFLPALSKQMAESGVTLHAAPSALPALQNGPAK VEPVKAEQYDDEYLSLDLNVKVVADMDEAIAHIREHGTQHSDAILTRTLRNANRFINEVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGFGDDTIRA >gi|289776635|gb|GG745509.1| GENE 76 75755 - 76858 1452 367 aa, chain - ## HITS:1 COG:ECs0269 KEGG:ns NR:ns ## COG: ECs0269 COG0263 # Protein_GI_number: 15829523 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 643 92.0 0 MSESQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAMGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT LRALLDNSIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQPGLFTADPR SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGNRPD VIGHAMEGLPVGTCFHAQESPLENRKRWIFGAPPAGELTVDAGATQAILERGSSLLPKGI KIVSGNFSRGEVIRIRNSEGRDIAHGVSRYNSDALRLIAGQHSQQIDAILGYEYGPVAVH RDDMIIR >gi|289776635|gb|GG745509.1| GENE 77 77148 - 78200 1771 350 aa, chain + ## HITS:1 COG:ECs0268 KEGG:ns NR:ns ## COG: ECs0268 COG3203 # Protein_GI_number: 15829522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 350 1 351 351 542 84.0 1e-154 MKKSTLALMMMGFVASTATQAAEVYNKNANKLDVYGKIKAMHYFSDYDSKDGDQTYVRFG IKGETQINDDLTGYGRWESEFSGNKTESDSSQKTRLAFAGVKLKNYGSFDYGRNLGALYD VEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGLVDGLDMTLQYQGKNEGREA KKQNGDGVGTSLSYDFGGSDFAVSAAYTSSDRTNDQNLLARGQGSKAEAWATGLKYDANN IYLATMYSETRKMTPISGGFANKAQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGVGSED LVNYIDVGLTYYFNKNMNAFVDYKINQLKSDNKLGINDDDIVALGMTYQF >gi|289776635|gb|GG745509.1| GENE 78 78245 - 78811 253 188 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 9 166 13 174 175 102 38 5e-20 MKPKLTHALFLIPFLLLAGCSSSPKQAKNTKSHADMTIDGGSDDLIPVVAALHDQMHTWQ GTPYEWGGTEQSGVDCSGFVWRTLKDRFNLPMERITTRELLHMGVRVNKRDLRPGDLVFF RTRAGMHVGFYDTDHNFLHASSSQGVMRSSLDNPYWESAFYQARRLPKEYNAQITMNSDT LHLAKNRR >gi|289776635|gb|GG745509.1| GENE 79 79223 - 80092 1202 289 aa, chain + ## HITS:1 COG:PA2712 KEGG:ns NR:ns ## COG: PA2712 COG0697 # Protein_GI_number: 15597908 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 6 284 7 286 287 184 49.0 2e-46 MHVRYSLLASQATTAIFVLLWGSAAIFTRWGLDNASPMALLVFRFLIALVALAPLAIVRR RWLPAPGTRLQTAATGLMLIGGYSVCYFEAMANGVTPGLIATIMGIQPILTLCVVERRLQ GRRLSGLLIALAGLVLLVWRSLAASPMAMVGILFALAALLLMTFGALWQKRSRQAPADVL PLQYAVSLGLCLLIAPVSGFQFTVNAGLIIPVLFLGLLISVVAQLLLYRLLSAGNIVNVT SLFYLVPVITALLDYLLLGNRLPAAAMVGMVAIIGGIVLVFRTAKVRAG >gi|289776635|gb|GG745509.1| GENE 80 80188 - 80853 887 221 aa, chain + ## HITS:1 COG:VC1940 KEGG:ns NR:ns ## COG: VC1940 COG0560 # Protein_GI_number: 15641942 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Vibrio cholerae # 1 218 1 218 220 216 47.0 3e-56 MGNTLTIFDLDNTLIQGDSSTVWSQFMVREGLATQKGYLAREARLMADYDRGEMNIADYV ALIQAPLAGIPKSDVDALVARCVREAILPRVYPQAWELIRRLRAEGEQMLIISASVSLLV QAVAAALEIDQALGIDVEMVDGGYSGVIAGIPSYQQGKVTRLAQWREAHPQYDGEVTFYT DSINDLPLCMHADRVRLVNPCPQLQAAGAGYGWPVLSWRLE >gi|289776635|gb|GG745509.1| GENE 81 81327 - 82211 1513 294 aa, chain - ## HITS:1 COG:YPO1185 KEGG:ns NR:ns ## COG: YPO1185 COG3639 # Protein_GI_number: 16121480 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Yersinia pestis # 10 291 13 294 295 375 70.0 1e-104 MSVWHMQPDIAASRRQHKQLYQVQGRYLRYVGLVALACVLYYVWFFLQFGISGEQLTTGL QQIGRYLARMFVWHDFWNWPFGYYFTQIGITLAIVFAGTLTATVLALLLSFFAARNIMRG MVLGTLALLMRRLFDVLRGIDMAIWGLIFVRAVGLGPLAGVLAIIMQDTGLLGRLYAEGH EAVDRSPGRGLTAVGANGMQKHRFGIFTQSFPTFLALSLYQIESNTRSAAVLGFVGAGGI GLIYAENMRLWNWDVVMFITLLLVAVVMIMDTLSAWLRRRYIGGAAVPLYQGGR >gi|289776635|gb|GG745509.1| GENE 82 82208 - 83080 1293 290 aa, chain - ## HITS:1 COG:YPO1184 KEGG:ns NR:ns ## COG: YPO1184 COG3639 # Protein_GI_number: 16121479 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Yersinia pestis # 26 288 3 265 266 371 75.0 1e-102 MKTTHTEFERYYQQVRSRQKRDTICWSLLLLALYFAAGSAAEFNLLTIWHSLPHFFDYMA ETIPPLSAGNLFADVQTKGSLAWWGYRLPIQLPLIWETLQLALASTLVAVAIATIFAFLA ANNAWTPAPVRFAIRVLVAFLRTMPELAWAVIFVMAFGIGAIPGFLALMLHTVGSLTKLF YEAVESAQNKPVRGLAACGASPLQKIRFALWPQVKPLFLSYGFMRLEINFRSSTILGLVG AGGIGQELMTNIKLDRYDQVSITLLLIILVVSALDMLSGRLRLWVLEGKK >gi|289776635|gb|GG745509.1| GENE 83 83148 - 84086 1382 312 aa, chain - ## HITS:1 COG:YPO1183 KEGG:ns NR:ns ## COG: YPO1183 COG3221 # Protein_GI_number: 16121478 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Yersinia pestis # 11 308 7 304 309 479 76.0 1e-135 MKKYMTGAVRLSAVVAGMMMAWQAAAAQPKELNLGILGGQNATQQIGDNQCVKTFLDKEL NVDTKLRNSSDYSGVIQGLLGGKVDVVLSMSPSSYASVYINNPKAVDIVGIAVDDKDQSR GYHSVVIVKADSPYKTLDDLKGKAFGFADPDSTSGYLIPNHAFKEKFGGNADNKYNNTFS SVTFSGGHEQDILGVLNGQFAGAVTWTSMVGDYNTGYTTGAFNRLIRMDHPDLMKQIRII WQSPLIPNGPILVSNALPADFKAKVVAAVKKLDTEDHACFIKAMGGTQHIGPGSVADFQQ IIDMKRELVSAR >gi|289776635|gb|GG745509.1| GENE 84 84109 - 84951 979 280 aa, chain - ## HITS:1 COG:YPO1182 KEGG:ns NR:ns ## COG: YPO1182 COG3638 # Protein_GI_number: 16121477 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, ATPase component # Organism: Yersinia pestis # 24 279 21 276 278 368 67.0 1e-102 MNSSLAAVAETDFQPFTDLDAGLQRKVLSVRNLTKAYHAQHKVLDGISFDLHAGEMVGVI GRSGAGKSTLLHVLNGTHSASGGEILSYPEVGMPHDVSKLKGRSLNAWRSQCGMIFQDFC LVPRLDVLTNVLLGRLSQTSTLKSLFKIFPEADRAHAIALLEWMNMLPHALQRAENLSGG QMQRVAICRALMQNPGILLADEPVASLDPKNTQRIMDVLREISEQGISVMVNLHSVELVK AYCTRVIGVASGQLIFDDHPSRLTQDVLQQLYGDEVSQLH >gi|289776635|gb|GG745509.1| GENE 85 85795 - 86337 369 180 aa, chain + ## HITS:1 COG:ECs0324 KEGG:ns NR:ns ## COG: ECs0324 COG2771 # Protein_GI_number: 15829578 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 180 17 196 196 299 90.0 2e-81 MEYKCCSDKYIWSAHDSYFYKGLSELILDIDELIYLSQEKIRKDFVFINLNTASLNEFIR RDSEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYVGLSRDIRKELAYVINGRFL RKDIKKDKITDREMKIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ >gi|289776635|gb|GG745509.1| GENE 86 86412 - 86999 750 195 aa, chain + ## HITS:1 COG:no KEGG:JW0287 NR:ns ## KEGG: JW0287 # Name: yagZ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 195 1 195 195 277 97.0 2e-73 MKKKVLAIALVTAFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG IKGFNSQKGLFDVAIEGDTTATAFKLTSRLITNTLTQLDTSGSTLSVGVDYNGAAVEKTG DTVMIDTANGVLGGNLSALANGYNASGRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGI WSGDVSVQFDATWTS >gi|289776635|gb|GG745509.1| GENE 87 87059 - 87727 709 222 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4091 NR:ns ## KEGG: Kvar_4091 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 222 1 222 222 419 100.0 1e-116 MKKHLLALGLLLVGVSPAQALDVGDISSFMNSGSSTLSKTIKNSTDSGRLINIHLERLSS PLDGGQVIPMDKPDEVLLTPASLLLPAQASDVIRFFYKGPADDKERYYRIVWFDQALSDA QRDNANRSAVATASARIGTILVVAPRQVNYRFQYANGSLTNTGNATLRILAYGPCLKAAD GKECKENYYLMPGKSRRFTQVDTANKKGRVALWQGEQFVPVK >gi|289776635|gb|GG745509.1| GENE 88 87753 - 90278 2903 841 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4090 NR:ns ## KEGG: Kvar_4090 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 841 1 841 841 1521 99.0 0 MPLRRISPGLKTQLAFGMIFLFVQPDASAAAVRAQQIGGVIIPQAFSRALQDGMSVPLYI HLAGSQDTRDDQRIGSAFIWLDDGQLRVRQIQLEESEGNASVSQQTRQQLIGLANAPFSE ALTIPLTDSAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVY NNQMRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTVFDNSQSATPVIAFLPAAGEVHLT RDGRLLSVQNFAMGNHEVDTRGLPYGIYDVEVEVIVNGRVVSKRTQRVNKLFSRGRGIGA PLAWQVWGGSFHMDRWSESGKKTRPAKESWLAGLSTSGSLSTLSWAATGYGYDNQAVGET RLTLPLGESINVNLQNMLASDSSWSSVGSISAALPGGFSSVWVNQERTRIGDQLRRSDAD NRAIGGTLNLNALWSKLGTFSVSYNDDRRYNSHYYTADYYQTVYSGAFGSLGLRAGIQRY NNGDSSANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTIGANLSR AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTASGSVGWQGKNIAASG RTDGNAGVIFNTGLEDDGQISARVNGRIFPLSGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EFVMDVDKKYPTIDFSYGGNKTCEVALELSQARGAVWVGDVVCSGLSSWAAVQQTGEENE S >gi|289776635|gb|GG745509.1| GENE 89 90268 - 91911 1850 547 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4089 NR:ns ## KEGG: Kvar_4089 # Name: not_defined # Def: receptor # Organism: K.variicola # Pathway: not_defined # 1 547 1 547 547 1015 99.0 0 MKVNALMALAILALLLPAAALRAAVTKTTWSDAPAREFVFVENNSDDNFFVTPGGALDPR MTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLNANWKFDMWLENSPVSHPLTGLRCIN WYAGCDMATSLILPQTTDASGFYGATVTSGGAKWMHGMMSDAFYQYLQQMPVGGSFTMTI NACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLG EGNADCQTQTIGSRAGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSL NGSSWKPVSNTAYYYTFNEMKSSDSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTT SPESGWYEFSTSNTLIIKPRDFSISIISDEYTSAPSREGYVGSGEPALDFGYIVTTSGKT AADEVLIKVTGPAQVIGGRSYCLFSSDDGTAKVPFPATLSFITRSGTTQTYDAGCDDSWR DMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQ ATWRNIN >gi|289776635|gb|GG745509.1| GENE 90 91880 - 92590 695 236 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4088 NR:ns ## KEGG: Kvar_4088 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 236 1 236 236 473 100.0 1e-132 MFRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVNNNKSARLYRI AISAIDRPGGSEVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNRERYYRVSFRE IPTRNLTRRSPTGGEVSMEPVVVMDTILVVRPREVQFKWSFDKVAGTVSNTGNTWFKLLI KPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPVKPRPAE >gi|289776635|gb|GG745509.1| GENE 91 92594 - 93283 1244 229 aa, chain - ## HITS:1 COG:YPO4109 KEGG:ns NR:ns ## COG: YPO4109 COG0765 # Protein_GI_number: 16124217 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 4 223 2 224 251 154 42.0 2e-37 MNANLAVIADNLDYLLWGRLAEGQPGGVALTLLMAIGATLLALPGGIALAGLAWRYGGLV RRLLFLWAEIIRGIPLIFVIFWLWYLLPMLTGGDLPGAVTVTLALAWFTAASVMHSVLAG LQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPE LTTVAGQVNNRVQIYPLAIFVFTGAVYYLLCCGLSLLASRRFTRRATAG >gi|289776635|gb|GG745509.1| GENE 92 93273 - 94016 1098 247 aa, chain - ## HITS:1 COG:YPO4110 KEGG:ns NR:ns ## COG: YPO4110 COG0765 # Protein_GI_number: 16124218 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 1 220 6 223 245 157 42.0 1e-38 MLDWHGVLSGQPLQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVTAWV SLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGV FTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQYLNLM KLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRLGPGRKLQ RSAQHER >gi|289776635|gb|GG745509.1| GENE 93 94022 - 94840 598 272 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 262 2 242 245 234 49 5e-60 MFSGLLSHSAAPAADFSRLQRASITFRDVAKRYGDHQVLNAINLQVEPGEVVAILGPSGS GKSTLIRLINQLESLSGGEILIDDKPTSRLSGSALRQLRSRVGFVFQQFNLYAHLTAQEN ITLALERVHGWGKSAAQERALALLRQVGLEEKAQQMPAQLSGGQQQRVAIARALASSPQI ILFDEPTSALDPEMIGEVLQVMKTLAHSGITMLVVTHEMQFAREIADRVVFIDGGDILEV APPAEFFAHPQHARARRFLQKVLDPLHQESLE >gi|289776635|gb|GG745509.1| GENE 94 94842 - 95651 1242 269 aa, chain - ## HITS:1 COG:PA2204 KEGG:ns NR:ns ## COG: PA2204 COG0834 # Protein_GI_number: 15597400 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Pseudomonas aeruginosa # 11 269 9 267 268 275 55.0 1e-73 MRNKTTKIALALGMLLLASQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYD VDFAQALAKALGVKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDFSTPYFVT GQQFLVPAGSPDKLDEYSKARIGAVKGTTGEQALHQRFPQARVLSYDDIPLALTALRNGN VQAITQDSTILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEK TGEAAKIYDVWFGPATKTPQPRAFTIEAK >gi|289776635|gb|GG745509.1| GENE 95 96095 - 96265 156 56 aa, chain + ## HITS:1 COG:no KEGG:KPN_00300 NR:ns ## KEGG: KPN_00300 # Name: umuC # Def: DNA polymerase IV # Organism: K.pneumoniae # Pathway: not_defined # 1 56 1 56 56 108 100.0 7e-23 MALWQRLTGWLAFLSNGEAGQQDTQRVMEAILPVASLYGVDIGNVETRWFRHDKTY >gi|289776635|gb|GG745509.1| GENE 96 96382 - 97077 272 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 227 1 235 245 109 29 3e-22 MLNARELKVFYGVIQGLKGVDIDVYDREIVTLIGSNGAGKTSTLNGIVNLVRSSGRVSFL NDDISRSQTHQIVRRGLALVPEGRRVFTNLTIEENLRMGAYNNLAGYTRLRDRMYALFPR LKERRHQMAGTMSGGEQQMLAIARALMSEPVLLMLDEPSLGLAPKIVGELFGIIKQLREE NMTVLLVEQNATAALAIADRAYVLENGRITLSGAAREMLTNPEIKRMYLGG >gi|289776635|gb|GG745509.1| GENE 97 97070 - 97852 245 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 232 33 238 329 99 28 5e-19 MAENNVILQVQDVTMQFGGLRAIDNVSFHVDEAEIFGLIGPNGAGKTTLFNVITANYKPT SGNVTLAGTSLKGLKPNQVVNAGIARTFQNIRLFNSMTVLENVMVGLDRASRYSLLEAAL HIGRYFPAERAAKAKAMAILEDIGIAHFAHMQATNLSYGNQRKVEIARALATAPKLLLLD EPAAGMNPKETEDLAELIFRMRHDYQLSVLLIEHDMPFVNRLCERVMVLEYGKPLFSGLM AEAIQHPDVISAYLGEANYA >gi|289776635|gb|GG745509.1| GENE 98 97839 - 98888 1572 349 aa, chain - ## HITS:1 COG:Cj1016c KEGG:ns NR:ns ## COG: Cj1016c COG4177 # Protein_GI_number: 15792343 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Campylobacter jejuni # 31 336 26 334 350 342 62.0 5e-94 MLNATTTAGAQLRNLAIIVICIALLAGINVVFNDYIVRVISTIFIFMILAVSYNLINGVT GQLSLEPNGFVAVGAYVTALLILSSDSKVDMFEMAAPSPWILSLHAGFLPALLISGLCAA ALAVCLAVPVFRVRGDYLAIVTLGFGFIIKILAINNPQITNGAIGLNDIPQQPHLLFWCG LFALLATGMILQLVWSKYGRMMKAIRDDEDAAIAMGVNTFRIKTCAFATSAFFEGIGGGL LASLLTTISPGLFDFMLTFQLLIIIVLGGLGSTTGALLGTVLVVGSGEWLRFLDQPLQFF GHDLGAYPGLRMVVFSLLLLIIMLFAREGLLGKKEIWQMGRRNSSYGGK >gi|289776635|gb|GG745509.1| GENE 99 98888 - 99787 1397 299 aa, chain - ## HITS:1 COG:Cj1017c KEGG:ns NR:ns ## COG: Cj1017c COG0559 # Protein_GI_number: 15792344 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Campylobacter jejuni # 1 299 1 298 298 318 62.0 1e-86 MDGAIFLQQVVNGMSLGGMYALIAIGYTMVYGVLRLINFAHADVMMVGAFSTLFLFSSVG LPFGVAVFLTLGLCGLFGMLIDRVAYRPLRQASKISMLITAIGVSFFLENLFNVMFGGSS RFFSAPDFFNQTRAFGSVIITNVAWIVPLITVLLLLAILWLLYRTRYGMAIRAVAFDVNT VRLMGIDANRIISLVFALGSSLAALGGVFYSISYPTIDPLMGVLIGLKAFAAAVLGGIGS VTGAVLGGFILGFTEVVAVAIFPELGGYKDAFAFLFLILVLLFRPVGIMGDERLERSRF >gi|289776635|gb|GG745509.1| GENE 100 99807 - 100913 1542 368 aa, chain - ## HITS:1 COG:Cj1019c KEGG:ns NR:ns ## COG: Cj1019c COG0683 # Protein_GI_number: 15792346 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Campylobacter jejuni # 16 368 19 371 371 294 45.0 2e-79 MATLVAALVGASSAQAAEIKIGVVLPLSGALSGYGQPSQKGLDIIQAITPTLKNGDTIKL IVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIADDSKTPLVSSTATNDR VTRNHPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDYSVGLAKAFRTQFLKN GGTIPIEVQAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEGALIAVQSKQLGLNKPVVGG DGLAADQVFFDVGKDAVNGYMTTDYYSPNAKEQTPAGETFIKAWEAKYQQPTHTWGAMAA DAYNVIVNAMNQCSDPHDRVCVNEKIRATKDFQGVTGTLTLQNGDAIRSAVINEVKDGKL AFRTVVNP >gi|289776635|gb|GG745509.1| GENE 101 101486 - 102265 950 259 aa, chain - ## HITS:1 COG:PA4025 KEGG:ns NR:ns ## COG: PA4025 COG4302 # Protein_GI_number: 15599220 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Pseudomonas aeruginosa # 5 250 13 261 273 217 51.0 2e-56 MNRPDAWNPLREFTDARIALGRSGASLPTREVLNFGLAHARARDAIHQPFASQQLVAPLA ALGLDALTVRSAAPDRHTYLRRPDLGRQLADESRADLAASGVRPADLLLVIGDGLSSWAV ERQAVPLIRALLPYLQTLGIGLAPVVLAHQSRVALGDDIGETLKARAVAILIGERPGLSS PDSLGVYLTWQPHRQRLESERNCISNIRPEGLSHDAAAFKLAWLLEQAFLRRVTGVQLKD ESDNPALHGKIKPLPPLKE >gi|289776635|gb|GG745509.1| GENE 102 102262 - 103650 1902 462 aa, chain - ## HITS:1 COG:PA4024 KEGG:ns NR:ns ## COG: PA4024 COG4303 # Protein_GI_number: 15599219 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Pseudomonas aeruginosa # 2 451 4 454 464 646 69.0 0 MYKTTLSGQVWRFDSLKTLMAKASPARSGDALAGVIATSAEERMAAKMALAEVPLPDILD NPLIPYEQDEVTRLILDTHDAQGFADLRHLTVGDFRDWLLDDATDTATLQRVARAITPEM AAAVSKLMRNQDLILAASKCQVVTRFRNTIGLPGHLSVRLQPNHPTDDLKGIAASMLDGL LYGAGDAVIGINPASDSLPVLAQLNVMLDDIIQRFAIPTQSCILTHVTNTLQLIERGAPV DLVFQSVAGTEAANSGFGINLAMLQEAREAALSLRRGTLGNNVMYFETGQGSCLSANAHH GVDQQTCEARAYAVARHFEPLLVNTVVGFIGPEYLYDGKQIIRAGLEDHFCGKLMGLPIG CDVCYTNHAEADQDDMDTLLTLLCTAGLTFLIGVPGADDIMLNYQSTSFHDALYARRLLG LKHAPEFADWLAKMQIIDPHGTLRLTDARHPLLSVLPQGASV >gi|289776635|gb|GG745509.1| GENE 103 103660 - 105039 2079 459 aa, chain - ## HITS:1 COG:CAC2719 KEGG:ns NR:ns ## COG: CAC2719 COG0531 # Protein_GI_number: 15895976 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Clostridium acetobutylicum # 8 422 5 401 438 271 39.0 2e-72 MTEQTTTLKRTLGSFRLWGIAVGLVISGEYFGWSYGWSQAGTMGFMVVALAVAAMYCAFI FSFTELTTAIPHAGGPFAYAYRAFGPTGGFIAGFATLIEFVFAPPAIAMAIGAYLNVQFP ALDPKWVACGAYVIFMTLNILGVGIAATFELIVTLLAIFELLVFMGVVAPGFSWSHFTTN GWAGAESFSGLALPGMFAAIPFAIWFFLAIEGASMAAEEAKDPQRTIPRALGGGILTLTV LAIGVMVFAGGVGDWRALSNINDPLPQAMKTVVGNGSGWLHMLVWLGLFGLVASFHGIIM GYSRQIYSLARAGYLPAGLATLNRRTRTPHLAILAGGVVGIAAIFSDSLITISGMPLTAC IVTMSVFGAIVMYITSMAALFKLRRSEPKLIRPFRAPLYPLAPAFALGMAVLCLVAMVWY NLLLALIFAAMMLGGYLWFRKTAAARERAPVDPQLRTVS >gi|289776635|gb|GG745509.1| GENE 104 105313 - 106722 1877 469 aa, chain + ## HITS:1 COG:ykfD KEGG:ns NR:ns ## COG: ykfD COG0833 # Protein_GI_number: 16128245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 5 469 11 475 475 813 93.0 0 MQSTTQQQGGQLKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALV VWLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSFTAAGFCM QYWFPQVPVWIWCVVFCAVIFGLNIISTRFFAEGEFWFSLVKVITIIAFIILGGAAIFGI IPMQDGSPAPGLHNITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPHKVIP VAIRTTIARLIIFFIGTVFVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTA ILSAANSGLYASGRMLWSLSNEKTLPACFAKVNKRGVPVTALSVSMLGGVLALFSSVVAP DTVFVALSAISGFAVVAVWLSICASHFMFRRRHLQQGKALSDLQYRAPWYPVVPVLGFVL CLVACVGLAFDPSQRIALWCGIPFVALCYGAWYLTRSRNMTQESQHVAD >gi|289776635|gb|GG745509.1| GENE 105 106709 - 107641 1431 310 aa, chain + ## HITS:1 COG:yagD KEGG:ns NR:ns ## COG: yagD COG2040 # Protein_GI_number: 16128246 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Escherichia coli K12 # 1 309 1 309 310 498 84.0 1e-141 MSQTNPFTALLAAQPYVLLDGAMATELEARGCDLADSLWSAKVLLENPQLIRDVHLDYFR AGAQVAITASYQATPAGFAARGLDDAQSRALIGKSVELARKAREAYLAENPQAGTLLVAG SVGPYGAFLADGSEYRGDYQRSAAEFQDFHRPRVEALLDAGADLLACETLPSFAEIQALT ALLQDYPRARAWYSFTLRDAEHLSDGTPLREVMAALADNPQVVAVGINCIALENTPAALA HLHSLTALPLVVYPNSGEHYDAVSKTWHHHGEACATLADYLPQWLAAGAKLIGGCCRTTP KDIAALNAKR >gi|289776635|gb|GG745509.1| GENE 106 107866 - 108828 1265 320 aa, chain + ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 1 320 20 339 339 526 87.0 1e-149 MAFTSRITLLAALAVAAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKTSGATVDWRKFDS GASVVRALASGDVQIGNIGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKSITKPEDL IGKRIAVPFISTTHYSLLSALKHWGIKPGQVQIINLQPPAIIAAWQRGDIDGAYVWAPAV NELEKEGKVLTDSAQVGEWGAPTLDVWVVRKDFAEQHPEIVKAFAKSAIDAQQPYIANPE TWLKQPDNISKLARLSGVPEADVPGLVKGNTYLTAAEQAQALNGPVNQAIVDTARFLKEQ GKVPAAGTDYRQYVTDRFVK >gi|289776635|gb|GG745509.1| GENE 107 108840 - 109607 260 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 205 1 215 245 104 31 8e-21 MLQISHLSADYGGKPALADINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITL EGQRVTGPGAERGVVFQNEGLLPWRNVQDNVALGLQLAGVDKAQRRQAAAQMLKKVGLEG AEKRFIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWHETGK QVLLITHDIEEAIFMATELVLLSPGPGRVVERLRLDFSRRFVAGESCRSIKSDPRFIEQR EYILSRVFDQREAFS >gi|289776635|gb|GG745509.1| GENE 108 109604 - 110431 1350 275 aa, chain + ## HITS:1 COG:tauC KEGG:ns NR:ns ## COG: tauC COG0600 # Protein_GI_number: 16128352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 275 1 275 275 386 89.0 1e-107 MSVVLNDKPRQTTLKWRWPLSRQLTLSVATLAVLLAVWWAVAALQLISPLFLPPPGQVLQ KLITIAGPQGFMDATLWQHLAASLTRIVIALLAAVLIGVPVGIAMGLNSTVRGILDPLIE LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAARSLG ASRAQVLWLVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ >gi|289776635|gb|GG745509.1| GENE 109 110428 - 111279 1194 283 aa, chain + ## HITS:1 COG:ECs0422 KEGG:ns NR:ns ## COG: ECs0422 COG2175 # Protein_GI_number: 15829676 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 516 90.0 1e-146 MSERLSITPLGPYIGAQVTGADLTRPLSDNQFEQLYHAVLRHQVVFLREQNITPAQQRDL ALRFGDLHIHPVYPHAPGVEEIIVLDTHNDNPPDNDNWHTDVTFIDTPPAGAILAAKELP TTGGDTLWTSGIAAWEALSEPFRQLLSGLHAEHDFRKSFQEYKYNKTEAEHRRWQEAVAK HPPLLHPVVRTHPVTGKQALFVNEGFTTRIVEVSEKESAALLNFLFAHVTKPEFQVRWRW QPNDVAIWDNRVTQHYANADYLPQRRIMHRATILGDKPYYRAG >gi|289776635|gb|GG745509.1| GENE 110 111441 - 113159 2374 572 aa, chain - ## HITS:1 COG:VCA0646 KEGG:ns NR:ns ## COG: VCA0646 COG3176 # Protein_GI_number: 15601404 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Vibrio cholerae # 31 563 56 593 605 259 32.0 1e-68 MFSLDNVLDDLWPQARPAPWQKKLLKKLFHEEEFQQFADRHRHLKGLDTVEQVLEYLNIR CAIPAHDLEQIPEYGPLVIIANHPTGTLDGLALLYAVSRVRRDVKVVTNRMLTHLEPLSS LFIPVDNIHGRTAKAALQQMDHQLQAGGVLIFFPAGEVSRLTRRGIRDKKWHSGFIKLAA KYRAPLLPAWINAHNSALFYASTLVSDNLPLLLLMQQMFRRRNSSLPVRIGQQIPWSSWF DAKSSARELTGRCYQHLEQLRKGLPGQFKTESAIARPEDRALLKRELHKAECLGRTTDGK VIYLWQRNGQEDAPLLRELGRLREIAFRAVGEGSGKRRDIDGYDDDYLHLILWDEDDLEI VGAYRFMPTAIQLAKRGLEGIYSYSLFHYDGRMDDVLQHGIELGRSFIQPRYWGRRGLDY LWSGIGAYLARYPHYRYLFGPVSISGGLPPAARDLLVAFYRLWFPATHPLAESRRPYPAS LPDVLAQFGGEDYNDDLARLKSLLGNLGCAIPPLYKQYSEVCEPGGVQFIDFGSDPDFNN CVDGLVLVDLTYLKANRYQRYIGAHLGAQKSA >gi|289776635|gb|GG745509.1| GENE 111 113340 - 113828 -19 162 aa, chain - ## HITS:1 COG:yafM KEGG:ns NR:ns ## COG: yafM COG1943 # Protein_GI_number: 16128214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 3 161 4 162 165 224 69.0 7e-59 MAYRRYYIKGGTWFFTVNLKDRRSMHLTENIELLRYSVAVVKQHRPFIIDAWVVLPEHLH CIWTLPHNDDDFSSRWRDIKGCFSRTLKRQPLWQPRFWEHAIRDEDDYRRHVDYIHINPL KHGWVTRVIDWPFSTFHRDVQRGLYPPNWAGDSFDLSCGERR >gi|289776635|gb|GG745509.1| GENE 112 114087 - 115061 1329 324 aa, chain - ## HITS:1 COG:STM0372 KEGG:ns NR:ns ## COG: STM0372 COG0113 # Protein_GI_number: 16763752 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Salmonella typhimurium LT2 # 1 324 1 324 324 582 92.0 1e-166 MTDLITRPRRLRQSAALRALFEETTLSLNDLVLPIFVEEEIDDYKAIEAMPGVMRIPEKY LAREIERIANAGIRSVMTFGISHHTDATGSDTWNENGLVARMSRICKSTVPEMIVMSDTC FCEYTSHGHCGVLCDHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRRSLD AAGFTNTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMSPMNRREAIRESLLDEAQG ADCLMVKPAGAYLDILRDIRERSDLPLGAYQVSGEYAMIKFAAQAGAIDEEKVVLESLGA IKRAGADLIFSYFALDLAEKKILR >gi|289776635|gb|GG745509.1| GENE 113 115167 - 116327 1327 386 aa, chain - ## HITS:1 COG:ECs0426 KEGG:ns NR:ns ## COG: ECs0426 COG1680 # Protein_GI_number: 15829680 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 654 84.0 0 MKRSLLIFAALCAASWTSVQAAQPTVDPVFASDVVDRYANHIYYGSGATGMALVVIDGNQ RVFRSFGETRPGNNQHPQLDSVIRIASLSKLMTSEMLVKLLDQGVVKLNDPLSKYAPPGT RVPDWQGKPITLVNLATHTSALPREQPGGAAHRPVFVWPTRQQRWNWLSTATLKTAPGSQ AAYSNLAFDLLADALSTAAGKPYPQLFEEQITRPLGMKDTTFTPSPDQCQRLMIPEKGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSDFYTRSQQADRMQTLIYQRNQLTRVIGMD VPGRADALGLGWVYMKPKNGHPGIIQKTGGGGGFITYMAMNPQANVGAFVVVTRSPLTRF NNMSDGINDLVSELSGAQPNMQTASQ >gi|289776635|gb|GG745509.1| GENE 114 116526 - 117059 679 177 aa, chain + ## HITS:1 COG:CAC3465 KEGG:ns NR:ns ## COG: CAC3465 COG1335 # Protein_GI_number: 15896704 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Clostridium acetobutylicum # 6 152 5 158 178 90 31.0 1e-18 MTAQRVVMVVDMQNGVFATPRLARERCVAQINRLVRAADKVIFIQHDEAGGLEAGSEGFA LLPELEQPAGALYVTKTACDAFYHTSLAQVLDEHDIQQFVICGCATDYCLDTTIKNGASR GYGIVIAEDAHTTADRPAAQAATLIAHYNEVWRTLTVPGNPLQVKPTETILHAWQQN >gi|289776635|gb|GG745509.1| GENE 115 117177 - 118397 1874 406 aa, chain + ## HITS:1 COG:STM0376 KEGG:ns NR:ns ## COG: STM0376 COG1133 # Protein_GI_number: 16763756 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Salmonella typhimurium LT2 # 1 400 1 400 406 702 89.0 0 MFKSFFPKPGPFFISAFIWSLLAVIFWQAGGGDWLLRVTGASQNVAISAARFWSLNYLVF YAYYLFCVGVFALFWFVYCPHRWQYWSILGTSLIIFVTWFLVEVGVAINAWYAPFYDLIQ SALATPHKVSINQFYHEIGIFLGIALIAVIIGVMNNFFVSHYVFRWRTAMNEHYMAHWQH LRHIEGAAQRVQEDTMRFASTLEDMGVSFINAVMTLIAFLPVLVTLSEHVPDLPIVGHLP YGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDETRATPPTVRE LFSAVRRNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFG QVRGSFQYLISSWTTLVELMSIYKRLRSFERELDGKPLQEAIPTLR >gi|289776635|gb|GG745509.1| GENE 116 118416 - 119522 1321 368 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4061 NR:ns ## KEGG: Kvar_4061 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 368 1 368 368 735 99.0 0 MAARLSRIIPGSLTLLAAMVLSACTSQQAPTLKKGEKPVDVASVVRQKMPASVKDREAWA QAIATAFDSQKLAPTEENVCSVLAVAQQESNYQSDPVVPGLNKIAWQEIDRRAEKMHIPP FLVHTALKITSPNGKSYSDRLDNVKTEKQLSAIFDDFIGMVPMGQKLFGSLNPVHTGGPM QVSIAFAEQHTSGYPWKMNGTVRQEVFSLRGGLWFGTYHLLNYPASYSVPLYRFADFNAG WYASRNAAFQNAVVKASGVKLALDGDLIRYDSEEPGSTELAVRRLAGQLGMSDSEIHRQL KKGDSLAFEKTDLYQQVFRLAEKRAGKTLPREMLPGIQLESPKITRNLTTAWFAKRVDER RANCMARR >gi|289776635|gb|GG745509.1| GENE 117 119519 - 119821 270 100 aa, chain - ## HITS:1 COG:no KEGG:KPK_4367 NR:ns ## KEGG: KPK_4367 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 100 1 100 100 190 100.0 2e-47 MAEFSFSKSLLGNKKRGALTGSHVAYGLFVLVCCWAGAQMLSMLIHAPGVFERLMQTQDA SRPQVDISLAVGTLFGLIPFLIGCSFIGLLALIVRWRQRR >gi|289776635|gb|GG745509.1| GENE 118 120075 - 120278 379 67 aa, chain + ## HITS:1 COG:no KEGG:KPK_4365 NR:ns ## KEGG: KPK_4365 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 67 36 102 102 126 100.0 2e-28 MKLTDKIRRDWHYYAVALGLIFILNGVVGLLGFETQGWQSYAVGLVTWVISFWAAGLVIR RRPAEEA >gi|289776635|gb|GG745509.1| GENE 119 120310 - 121407 1564 365 aa, chain - ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 634 86.0 0 MAKMRVGIVFGGKSAEHEVSLQSAKNIVEAIDKSRFDVVLLGIDKQGLWHINDAGNYLLN AQDPARIALRPSTVTLAQIPGREAQQLINADSGQPLAAIDVIFPIVHGTLGEDGSLQGML RMANLPFVGSDVLGSAACMDKDVTKRLLRDAGLAVAPFITLTRANRAQFSFADVEAKLGL PLFVKPANQGSSVGVSKVKNEEQYHQAVALAFEFDHKVVVEQGIKGREIECAVLGNDHPQ ASTCGEIVLNSEFYAYDTKYIDDQGAQVVVPAAIAPEINDKIRAIAVQAYQTLGCSGMAR VDVFLTAENEVVINEINTLPGFTNISMYPKLWQASGLDYTSLITRLIELALERHAADRAL KTSMN >gi|289776635|gb|GG745509.1| GENE 120 121507 - 122190 613 227 aa, chain + ## HITS:1 COG:STM0381 KEGG:ns NR:ns ## COG: STM0381 COG3921 # Protein_GI_number: 16763761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 226 11 236 237 303 67.0 1e-82 MRGKTLLVLAGMLGAGLLGYRYLPPHLNPLAPLALNDPPGWLTSFKLRRLTADQCASLLA EANRRRLIASQPVADSEGSCPLHNVVRVANFGSVTLSSSFLASCPLALSSALYVEQQAKP LTRQLMASDLRQIDHLGSFACRNIYHRQQARRSEHATADALDVSGFRLADGRRVSVLQGW RSETSHPWLAALLNNSCHYFGNALGPEYNAAHANHFHLGMRGQGFCF >gi|289776635|gb|GG745509.1| GENE 121 122360 - 123559 1501 399 aa, chain + ## HITS:1 COG:STM0382 KEGG:ns NR:ns ## COG: STM0382 COG0477 # Protein_GI_number: 16763762 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 397 1 397 403 591 86.0 1e-169 MESWKVNLISVWFGCFFTGLAISQILPFLPLYVSQLGVTSHEALSMWSGLTFSVTFLVSA IVSPMWGSLADRKGRKLMLLRASLGMAIAILLQAFATNVWQLFILRAIMGLTSGYIPNAM ALVASQVPRERSGWALSTLSTAQISGVIGGPLLGGFLADHVGLRMVFFITAILLTISFLV TLFLIKEGGRPQVSKSERLTGKQVLASLPYPGLVISLFFTTLVIQLCNGSIGPILALFIK SMAPDSNNIAFLAGMIAAVPGVSALISAPRLGKLGDRIGTSRILLATLCCAVVMFFAMSF VTTPLQLGTLRFLLGFADGAMLPAVQTLLLKYSSDSVTGRIFGYNQSFMYLGNVAGPLIG ASVSAMAGFRWVFIATAIIVFINLWQLAWMLRRTRRANA >gi|289776635|gb|GG745509.1| GENE 122 123860 - 124120 299 86 aa, chain + ## HITS:1 COG:no KEGG:KPN_00326 NR:ns ## KEGG: KPN_00326 # Name: yaiB # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 86 1 86 86 106 98.0 3e-22 MKNLIAELLVKLAQKEEEAKELTVQVEALEIVVTALLRHMEHDAQQALIQDIEQAIDQVT PCPPVNDQDAMLLQQYLKKLLRHPRS >gi|289776635|gb|GG745509.1| GENE 123 124211 - 125641 1636 476 aa, chain + ## HITS:1 COG:phoA KEGG:ns NR:ns ## COG: phoA COG1785 # Protein_GI_number: 16128368 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Escherichia coli K12 # 5 476 23 494 494 759 86.0 0 MEMTKVKLSALFIALVPLLGSPVIHAETTAAPVLENRAAQGDITTPGGARRLTGDQTEAL RASLINKPAKNVILLIGDGMGDSEITAARNYAQGAGGFFKGIDALPLTGQYTHYSLDKKT GKPDYVTDSAASATAWTTGVKTYNGALGVDIHENAHQTLLELAKAAGLATGNVSTAELQD ATPAALVAHVTSRKCYGPTVTSEKCPSNALEKGGKGSITEQLLNARPDVTLGGGAKTFAE TATAGEWQGKTLREQAEARGYQIVTDAASLAAATDASQAKPLLGLFADGNMPVRWEGPKA SYHGNIDKAPVTCTPNPKRDASVPTLAQMTEKAIDLLSRNEKGFFLQVEGASIDKQDHAA NPCGQIGETVDLDEAVQKALEFARKDGNTLVIVTADHAHASQIIPADSKAPGLTQALNTH DGAVMVMSYGNSEEESMEHTGTQLRIAAYGPHAANVVGLTDQTDLFSTMKAALSLK >gi|289776635|gb|GG745509.1| GENE 124 125733 - 126050 237 105 aa, chain + ## HITS:1 COG:no KEGG:KP1_1187 NR:ns ## KEGG: KP1_1187 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 105 28 132 132 145 93.0 6e-34 MKITLLMTLLFGLIFISAVGAAEKTPTPQQQKMTDCNQQASAKALKGDERKTFMSQCLKK ETTTSQGKALTPQQQKMSDCNKAASAKSLKGDERSTFMSTCLKKA >gi|289776635|gb|GG745509.1| GENE 125 126123 - 126932 1271 269 aa, chain - ## HITS:1 COG:proC KEGG:ns NR:ns ## COG: proC COG0345 # Protein_GI_number: 16128371 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Escherichia coli K12 # 1 269 1 269 269 446 89.0 1e-125 MDKKIGFIGCGNMGKAILGGLIASGQVQPGQIWVYTPSPDKVAALRDQYGINAAGSAQEV AQIADIVFGAVKPGIMTKVLGDVASSLNKESLVVSIAAGVTLEQLARALGHDRKIIRAMP NTPSLVNAGMTSVTPNALVSSEDVAEVLTIFRCFGQAEQIAEPMIHPVVGVSGSAPAYVF MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLESGEHPGALKDMVCSPGGTTIEAV RVLEEKGFRSAVIEAITQCMEKSEKLSRS >gi|289776635|gb|GG745509.1| GENE 126 127048 - 127506 543 152 aa, chain + ## HITS:1 COG:ECs0436 KEGG:ns NR:ns ## COG: ECs0436 COG1671 # Protein_GI_number: 15829691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 41 192 192 249 84.0 1e-66 MAIWVDADACPNVIKEILFRAAERTQTPVTLVANQPLRVPPSRFIRTLRVEQGFDVADNE IVRQCAAGDLVITADIPLAAEVLAKGGAALNPRGERYSEATIRERLTMRDFMETLRASGV QTGGPDSLSQRDRQQFAAELEKWLLAVKRQQG >gi|289776635|gb|GG745509.1| GENE 127 127503 - 128198 862 231 aa, chain - ## HITS:1 COG:BU181 KEGG:ns NR:ns ## COG: BU181 COG3416 # Protein_GI_number: 15616800 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Buchnera sp. APS # 1 184 1 186 238 109 37.0 4e-24 MQSEEQRLIDGLFSRLKEAEAHSASRDTSAEERIAQHVSAQPAAPYYMAQTILIQEAAIK QLNDRIQALESQVSQLQAAKPSSGGFLSGLFGGGGSSRGSDPIPGAEQYGRPQASAQPQY ASPQQQPNYAPQAAARGGGFMAGALQTAAGVAGGVVLGNMLTNMFSGSHPQEIVNIIEEQ PQPDAAAQDATAGDDPFRQGDDQFLADNTWNDDFDAGFGDDDIGSDDDSWV >gi|289776635|gb|GG745509.1| GENE 128 128526 - 129059 581 177 aa, chain + ## HITS:1 COG:STM0388 KEGG:ns NR:ns ## COG: STM0388 COG0703 # Protein_GI_number: 16763768 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Salmonella typhimurium LT2 # 1 172 1 172 181 202 59.0 3e-52 MTQPIFLIGPRGCGKTTVGHALARARHFQFSDTDHRLQAHEQRTVAEIVQAEGWARFREL ETLSLKAVTLPNTVIATGGGIVLAEGNRQFMRENGVVIYLQASVSALIDRLEAYPKAEQR PTLTGKPVREEVGEVLAQREALYRDAAHHIVDATASPDRVVEQIMTMLCGATATPVS >gi|289776635|gb|GG745509.1| GENE 129 129131 - 129322 164 63 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4048 NR:ns ## KEGG: Kvar_4048 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 63 1 63 63 90 100.0 2e-17 MPNRPPYPREARVVAVEKGPQGQTVTWYQLRADYPEPNSLISEHPTEQEAVDAKRRYEDP DKS >gi|289776635|gb|GG745509.1| GENE 130 129588 - 130253 809 221 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4047 NR:ns ## KEGG: Kvar_4047 # Name: not_defined # Def: AroM family protein # Organism: K.variicola # Pathway: not_defined # 1 221 1 221 221 397 100.0 1e-109 MAILTIGVVPLAGVLPLLTEHIREEQITHISLLGDMTHAEVTKEYAVGDGEQGLLTLLND NQLVMVSRQKIERDIRSVIAMLDRQNYDVILLLSSEQLSGFTTHHAILLEPQRIIPPLVA SIVDGHQVGVIVPVEEIMPMQRQKWLSLEKSPYYALANPFTGSDSELLSAGKTLLEQGAD VLVLDCLGYYQHHRDVLQKALDVPVLLSNVLVSRLAAELLV >gi|289776635|gb|GG745509.1| GENE 131 130268 - 130615 419 115 aa, chain + ## HITS:1 COG:STM0391 KEGG:ns NR:ns ## COG: STM0391 COG3123 # Protein_GI_number: 16763771 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 22 115 1 94 94 164 91.0 4e-41 MTGARSAPYIEPLTDDQKGLFMLQSNEYFDGKVKSIGFTSSSTGRASVGVMAEGEYTFGT AQPEEMTVVSGALNVLLPGETEWKVYAAGEVFNVPGNSEFHLQVAEPTSYLCRYL >gi|289776635|gb|GG745509.1| GENE 132 130688 - 131599 1350 303 aa, chain - ## HITS:1 COG:STM0392 KEGG:ns NR:ns ## COG: STM0392 COG2974 # Protein_GI_number: 16763772 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Salmonella typhimurium LT2 # 1 303 1 303 303 559 97.0 1e-159 MLWFKNLMVYRLSRDIELRAEEMEKQLAELTFTPCGSQDMAKTGWVSPMGSHSDALTHTA NGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRAF SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKTLGSLPVVPLTLENPIELTLTEWV RSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRI QFVICDDASIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGE AQR >gi|289776635|gb|GG745509.1| GENE 133 131691 - 132605 290 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 298 6 316 319 116 31 3e-24 MRIGIDLGGTKTEVIALSDQGEQLFRHRLPTPREDYRQTIETIATLVAMAEQATGQQGTV GMGIPGAISPYTGVVKNANSTWLNGQPFDKDLSLRLEREVRLANDANCLAVSEAVDGAAA GAQTVFAVIIGTGCGAGVALNGRAHIGGNGNAGEWGHNPLPWMNDDELRYRAEVPCYCGK QGCIETFISGTGFATDYQRLSGKGLTGSEIMRLVGEGDEKAELALSRYEQRLAKSLAHVV NILDPDVIVLGGGMSNVERLYQTVPDLVKQWVFGGECETPIRKALHGDSSGVRGAAWLWP LQGT >gi|289776635|gb|GG745509.1| GENE 134 132812 - 135043 2419 743 aa, chain - ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 2 743 304 1047 1047 565 56.0 1e-160 MAGLAQTRQRINEVNARLLACTAQRARIRRSALHAQQQRQAELTDLAQWLAAHDRFRLWG QEIAGWRAQFSQLTRDKQQLTAQTTRLAALRQKLSTLPASSLSLSAEEVAAAMAQQTQSR PLRQRLLSLHEQHQQLHKRLRQSAENIQQAQTEEAKLNATLTQRREQYKDKNQHYLDLKA LCQREETIKDLEGYRARLEAGKPCPLCGSCEHPAIEQYASLTVTDNQRRRDALEKEVAAL KEEGLLVLGQVNALTQQLQRETEAARRLTEEEQALTKAWQETCASLQVTRDIAQEINDWM QEQERYEQQLYQLSQRLMLQSQLNDQQALERQAHQQLETTRQGLENALQTLSLSLPEEGA EAAWLHARESEFARWQAQQTRHGVLQEQIAALKPLLDTLPPGDEDDAEAEPVIPDNWREI HEECLSLHSQLVAQQQLETEETARVHQSQTQFTTALAASRFNDREAFLAALLDDETAQRL TQLKQSLEQQLQQATVLCEQATQQQQAHLALRPQGSDADGPTLQTQLHALAQRLRDNTTR QGEIRQQLRQDNESRQQQQALGQQIAEAAQLADDWGYLNSLIGSSTGDRFRKFAQGLTLD NLVWLANQQLNRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKERIP VQIKVKKINGLGYSRLDRVFAVE >gi|289776635|gb|GG745509.1| GENE 135 135185 - 135988 928 267 aa, chain - ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 1 258 1 258 1047 374 86.0 1e-103 MKILSLRLKNLNSLKGEWKIDFTAEPFVSNGLFAITGATGAGKTTLLDAICLALYHETPR LNKVSQSQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCA DGKILADKVSDKLEQTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE IYGQISAMVYEQHKAARHALEKFEAQAAGIVLLTEAQQQALQESLQVLTDEEKTLLTQQQ NQQQQLQWLTRCDELAQQHQQAVSRQR >gi|289776635|gb|GG745509.1| GENE 136 135985 - 137190 1421 401 aa, chain - ## HITS:1 COG:ECs0448 KEGG:ns NR:ns ## COG: ECs0448 COG0420 # Protein_GI_number: 15829702 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Escherichia coli O157:H7 # 1 399 1 399 400 639 77.0 0 MRLLHTSDWHLGQNFYSKSRAAEHDAFLTWLLARAQEHEVDAIIVAGDIFDTGSPPSYAR ELYNRFVVQLQQTGCRLVVLAGNHDSVAMLNESRDILAFLHTTVVANAGYAPIELPLRDG TPGAIFCPVPFLRPRELVTSQAGHSGREKQQQLLHAISDYYQEQYQQACALRGDRPLPII ASGHLTTVGASKSDAVRDIYIGTLDAFPAQHFPPADYIALGHIHRAQVVGGCEHIRYSGS PLPLSFDETGKAKSVHLVSFNDGRLSAVETLEVPVTQPLAVIKGDLAAIIAQLEQWRGVE QDPPVWLDIEITTEDYLHDIQRHIQALTEDLPVEVLLVRRSREQREKILLNAQRETLSEL KVEEVFERRLALTEIDDDKRARLHELFTHTLHTLTAEDENA >gi|289776635|gb|GG745509.1| GENE 137 137373 - 138062 788 229 aa, chain + ## HITS:1 COG:STM0397 KEGG:ns NR:ns ## COG: STM0397 COG0745 # Protein_GI_number: 16763777 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 447 98.0 1e-125 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS GLQFIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEMQGLSLDPSSHRVMTGDSPLDMGPTEFKLLHFFMTHPERVYSREQLL NHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTVRGTGYRFSARF >gi|289776635|gb|GG745509.1| GENE 138 138084 - 139379 1495 431 aa, chain + ## HITS:1 COG:STM0398 KEGG:ns NR:ns ## COG: STM0398 COG0642 # Protein_GI_number: 16763778 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 429 1 429 431 758 86.0 0 MLERLSWKRLALELFLACIPALILGAFVGHLPWFLLAAVTGLLIWHFWNLMRLSWWLWVD RSMTPPPGRGSWEPLLYGLHQMQMRNKKRRRELGSLIKRFRSGAESLPDAVVLTTEEGAI FWCNGLAQQILNLRWPDDSGQNILNLLRYPEFANYLKQRDFSKPLNLVLNNARHLEIRVM PYTDKQWLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMQEQVLEGATRE KALHTMREQTQRMEGLVKQLLTLSRIEAAPALAMNDRIDVPMMLRVVEREAQTLSQEKQT LIFTVDEQLKVLGNEEQLRSAISNLVYNAVNHTPPGTEIRVSWQRTPQGARFSVEDNGPG IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHDSRLEIDSTVGKGTRFSFL LPERLIARNDA >gi|289776635|gb|GG745509.1| GENE 139 139792 - 141111 1780 439 aa, chain + ## HITS:1 COG:STM0399 KEGG:ns NR:ns ## COG: STM0399 COG1114 # Protein_GI_number: 16763779 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 439 1 439 439 693 91.0 0 MTHQLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAIGFLITAVGLPVLTV VALAKVGGGVESLSTPIGKVAGILLAVVCYLAVGPLFATPRTATVSFEVGIAPLTGDGPL PLLIYSVIYFALVILVSLYPGKLLDTVGNFLAPLKIIALIVLAVAAIIWPAGPISDALEA YRTAPFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVSEARLLTRYTVWAGLMAGVGLT LLYLALFRLGSDSATLVDQSANGAAILHSYVQHTFGGAGSFLLAALIFIACLVTAVGLTC ACAEFFAQYLPFSYRTLVFILGLFSMAVSNLGLSHLIQVSIPVLTAIYPPCIALVVLSFT RSWWHNSSRVIAPAMFISLMFGIIDGIKSSAFAAILPAWTARLPLAEQGLAWLMPTAVMV FLAVIWDRAAGRQVTSSAH >gi|289776635|gb|GG745509.1| GENE 140 141198 - 142571 1947 457 aa, chain + ## HITS:1 COG:STM0400 KEGG:ns NR:ns ## COG: STM0400 COG1113 # Protein_GI_number: 16763780 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 766 95.0 0 MESSNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMR ALGEMSVHNPAASSFSRYAQENLGGLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMILAGFGIIIWGIGNGGQ PTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP MRILVFYVGTLFVIMSIYPWNQVGTDGSPFVLTFQHLGITFAASILNFVVLTASLSAINS DVFGVGRMLHGMAEQGSAPKVFAKTSRRGIPWVTVMVMTIALLFAVYLNYIMPENVFLVI ASLATFATVWVWIMILLSQIAFRRRLSPEEVKALKFKVPGGVVTTVVGLVFLAFIIALIG YHPDTRISLYVGMAWIGLLLLGWVFKTRRDRRLAQAQ >gi|289776635|gb|GG745509.1| GENE 141 142722 - 144539 2284 605 aa, chain + ## HITS:1 COG:malZ KEGG:ns NR:ns ## COG: malZ COG0366 # Protein_GI_number: 16128388 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 602 2 603 605 1025 79.0 0 MLKAWHLPVAPFIKVQQDRLFITLWLSGESLPQRITLRAEEDNEELSLPMQRLRQAPQPG VVAWRGEISLASGQPRRRYSFKLLWADHQRWFTPQGFTRFPPARLEQFAIDLPDAGPQWV ADQVFYQIFPDRFARSAARDADQDAVYYHHAAGREIVRKAWDEPLTGEAGGSTFYGGDLD GISEKLPYLKQLGVTALYLNPVFAAPSVHKYDTEDYRRVDPQFGGDAALLRLRHNTQRAG MRMILDGVFNHTGDSHPWFDRHQQGSGGAGHYPDSPWRDWFTFSEEGQAHNWLGYASLPK LDYRSTSLVNEIYAGEDSIVRHWLKAPWSMDGWRLDVVHMLGEGGGARNNLQHIAGITQA AKQTQPEAFVFGEHFGDARQWLQADAEDAAMNYRGFTFPIWGFLANTDISYDPQKIDAQT CMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKSLLGKDVARLPLAVVWLFSWPGVPCIY YGDEVGVDGNNDPFCRKPFPWDPALQDTQLLALYQRMAKLRKAQQALRYGGCQVIYAEDN VVVFVRVYKQQRVLVAINRGEACEVVIEDSPLLNVAGWTLLEGAGAFQDGVLTLPAISAS VWSGR >gi|289776635|gb|GG745509.1| GENE 142 144536 - 145453 1129 305 aa, chain - ## HITS:1 COG:ECs2817 KEGG:ns NR:ns ## COG: ECs2817 COG0583 # Protein_GI_number: 15832071 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 6 304 8 306 316 311 51.0 1e-84 MDSSPMRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLDIVLLDRSGH RAKFTDTGRLMLEKGRQLLSAARDLEKQAQQLSAGWERELAIALDASFPFSALLPLIAEF YAQNPQTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAP AHPLAQAKEPLTNKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAG LGCGFLPRHIARPWLEKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLL SQLYR >gi|289776635|gb|GG745509.1| GENE 143 145707 - 146348 953 213 aa, chain + ## HITS:1 COG:PA2698 KEGG:ns NR:ns ## COG: PA2698 COG1335 # Protein_GI_number: 15597894 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Pseudomonas aeruginosa # 5 211 6 213 226 287 67.0 1e-77 MSIRELLDPTNSALIFIDHQPQMSFGVANIDRQTLKNNTVALAKAGKIFNVPVIYTSVET KSFSGYIWPELLAVHPDVKPIERTSMNSWEDDAFVAAVKATGRKKLVISALWTEVCLTFP ALMALEAGYEVYVVTDTSGGTSVDAHERSIDRMVHAGAVPVTWQQVLLEYQRDWSRKATY DAVMDLVREHSGAYGMGVDYAYTMVHGAPERKA >gi|289776635|gb|GG745509.1| GENE 144 146534 - 147079 597 181 aa, chain + ## HITS:1 COG:DR2141 KEGG:ns NR:ns ## COG: DR2141 COG3224 # Protein_GI_number: 15807135 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 3 180 7 184 184 97 34.0 1e-20 MAQQKSVTLVISHLLDPQHGQRYEEWLGKIMPIAAEFPGHLGANVIRPAAGQNLWSVIIR FDTLEHLYAWTQSETRRQLVAEIAPLLTEGDRTEVRTEPAFWFTPPTANVRQPRRWKQFL ITLLVIFPSTNLVPAVTGMLLPSLKGSLLLHLINDACVVALVVWFWMPIVTRLFAGWLKK N >gi|289776635|gb|GG745509.1| GENE 145 147104 - 148972 2383 622 aa, chain + ## HITS:1 COG:PA2699 KEGG:ns NR:ns ## COG: PA2699 COG1574 # Protein_GI_number: 15597895 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pseudomonas aeruginosa # 4 622 2 612 612 974 75.0 0 MSQTATLILTHGQIHTLDRANPLAEAVAIADGKIVATGSHDRIMSFAAEGTQIVDLKGHT VIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKDQADRTPSPQWVRVVGGWSEF QFAERRMPTLEELNDAAPDTPVFVLHLYDRALLNRAALKAVGYTKETPDPVGGEIVRDSR GNPTGMLIAKPNAMILYATLAKGPKLPLDLQVNSTRQFMRELNRLGLTSAIDAGGGFQNY PEDYEIIEQLHAKDQMTVRIAYNLFTQRPKQELEDFERWTDMLKPGQGTDFYRANGAGEM LVFSAADFEDFLQPRPDLPQGMEDELERVVRHLVEHRWPFRLHATYDESISRMLDVFEKV NRDIPFNGLHWFFDHAETITERNIERVKALGGGIAVQHRMAFQGEYFVDRYGKEAVKHTP PVAKMLELDVPVGLGTDATRVASYNPWTALYWLVSGRTVGGMAMYDDDNRLPRDVALELW TAGSAWFSSEQGKKGRLAAGQLADLVVLSKDYFSVAEEEIKGIESVLTVVDGKVVYAAGH FSPLAPPPIPVLPEWSPVVKVPGHYRSAPPAAAKIGAMVQMHQCCGSCGVHGHQHDIARR SSIPVSDEQAFWGVLGCSCFAF >gi|289776635|gb|GG745509.1| GENE 146 149032 - 149892 1028 286 aa, chain - ## HITS:1 COG:SA1927 KEGG:ns NR:ns ## COG: SA1927 COG0191 # Protein_GI_number: 15927699 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Staphylococcus aureus N315 # 2 285 3 284 286 286 51.0 2e-77 MLVSMKDMLQHALKNGYAVGQFNINNLEWVGAVLSTAQQCRSPVILGVSGGTVKHMLGLK CIHDIVVNAIDYLHIDIPVALHLDHGTTQEACEAAIAAGFSSIMFDGSHLPFRENLTITR HLVALAHSKGISVEAELGTIAGSEDGIVNSEVIYADPEECYTLVTETQVDCLAAALGSTH GLYKGKARLGFTEMKAIAERVKVPLVLHGGTGIADEDMRRAIACGTAKINVNTENMYAWC QQVKTIFAADTGHDVNDPRKVITQGLQPVREMIARRMALFGSQQRY >gi|289776635|gb|GG745509.1| GENE 147 149922 - 150884 854 320 aa, chain - ## HITS:1 COG:yihV KEGG:ns NR:ns ## COG: yihV COG0524 # Protein_GI_number: 16131723 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 3 299 6 288 300 99 27.0 7e-21 MAILSIGFACFDQFFFLNEWPQENTKNFCHDFIESGGGPAANAAWLLGLWGEEVYYIGHL HQDLYGQRIIDEFAEAGVDTSQVVFSDDMITPLASVLVNRLTGSRTIITRKMQTPPSLTY DQKLKLDDLAERLIASEEPVTILIDGHEAEISEYLIKKLPHAKVVMDGGSLRASNIKLAA WTDYFVVSEHFARDYMSYRSLSTEADIKAALIELNKICRGEAFITLGEKGCAFLKSGMLQ IVPSWLCNAVDTTGAGDVFHGAFTYGVHYSWHIDNIILFASLTAAISIEKKGVRESMPDL AVVHHSLNSYERNLKQYFEE >gi|289776635|gb|GG745509.1| GENE 148 150950 - 152341 1751 463 aa, chain - ## HITS:1 COG:SPy1949 KEGG:ns NR:ns ## COG: SPy1949 COG3037 # Protein_GI_number: 15675750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 372 1 376 411 428 63.0 1e-119 MQAILSFLAEIFSQPAFLMGLIAFVGLVALRSPGNKLLTGTLKPILGYLMLSAGAGVIVA NLNPLGGIIEAGFNIRGVIPNNEAIVSVAQKMLGVETMSILLLGFIFNLIIARCTKYKYI FLTGHHSFFLACLFSAVLQAAEFHGWMLILIGGFLLGSWSAISPAIGQRYTKQVTEDGGI AMGHFGSLGYYLSAWIASRTGNPANSFADTEISEKWGFLRDTTVTTGIVMFVIYFVCSAV AGSAYLSTITDQNMLIFSVLTGLQFAVGVAIVYNGVRLILGDLVPAFQGISQKLIPDSIP AVDCAVFFTFSPTAVVVGFISSFVGGLVGMLLLGGLGMALIIPGMVPHFFCGGTSGVFAD KLGGKRGCIIASFIGGIFLAFLPAMLLPALGNLGFENSTFADFDFAVWGIIIGNAFTQFG QVTIYLICVVLLVALLAPFCFRHVRVVGDTLSYEELTAKQKNE >gi|289776635|gb|GG745509.1| GENE 149 152362 - 152649 297 95 aa, chain - ## HITS:1 COG:SPy1950 KEGG:ns NR:ns ## COG: SPy1950 COG3414 # Protein_GI_number: 15675751 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 92 1 92 94 77 44.0 5e-15 MLVIRTVCGNGIGSSLMAANNVKKICEELGIKADVASVDFANAVGEKADLYITIKELANQ FPAHCHVAIIRSYVHKAKIAEDITDALTKIAANHS >gi|289776635|gb|GG745509.1| GENE 150 152655 - 153098 455 147 aa, chain - ## HITS:1 COG:BH0221 KEGG:ns NR:ns ## COG: BH0221 COG1762 # Protein_GI_number: 15612784 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus halodurans # 1 121 1 120 147 84 37.0 8e-17 MEIIFDPSLIALKQNISRAEEAIELAGLLLARRQICSAEYVNEMLTVYEDFGAAIVIDDG IAMPHARPEKGALQTGFSLVTTATPISFGHDEFDPVTVIIAIAGADADSHIKMIQLIASL IESDIVTFLQQENDVNSVLHFIQKQME >gi|289776635|gb|GG745509.1| GENE 151 153445 - 154047 855 200 aa, chain - ## HITS:1 COG:STM0402 KEGG:ns NR:ns ## COG: STM0402 COG0450 # Protein_GI_number: 16763782 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 200 1 200 200 400 94.0 1e-112 MVLVTRQAPDFTAAAVLGNGEIVEKFNFKQHTNGKPTVLFFWPMDFTFVCPSELIAFDKR YEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDQGGIGPVKYAMVADIKREIQKAYGIEHPD EGVALRGSFLIDANGVVRHQVVNDLPLGRNIDEMLRMVDALQFHEEHGEVCPAQWEKGKE GMAASPEGVAKYLTENVSSL >gi|289776635|gb|GG745509.1| GENE 152 154175 - 154756 897 193 aa, chain - ## HITS:1 COG:STM0403 KEGG:ns NR:ns ## COG: STM0403 COG3124 # Protein_GI_number: 16763783 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 276 77.0 2e-74 MNFLAHLHLAHLADSSLPGNLMADFVRGNPQGDYPAEIIDGIYMHRRIDVMTDNLAEVKE AREWFRPQTRRVAPITLDVMWDHFLSQHWAQLSPDLPLDEFVRYAEQQIVPILPDSPPRF VNLNQYLWSERWLERYQEMDFIQRVLNGMASRRPRLDALRDSWQDLDTHYDQLEGQFWRF YPQMMRLAENKQL >gi|289776635|gb|GG745509.1| GENE 153 155012 - 156076 1325 354 aa, chain + ## HITS:1 COG:ECs0456 KEGG:ns NR:ns ## COG: ECs0456 COG0809 # Protein_GI_number: 15829710 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Escherichia coli O157:H7 # 1 353 1 353 356 660 93.0 0 MRVTDFAFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDILDKLNPGDLLVFNN TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESIKATML ARHGALFEVEFNDERPVLEILNGIGHMPLPPYIDRPDEDADRELYQTVYGTRPGAVAAPT AGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHTMHSEYAEVPQEVVDAV LAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFIYPGYQYQVIDALVTNF HLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFITYNPQAISERP >gi|289776635|gb|GG745509.1| GENE 154 156186 - 157313 1268 375 aa, chain + ## HITS:1 COG:STM0405 KEGG:ns NR:ns ## COG: STM0405 COG0343 # Protein_GI_number: 16763785 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 375 1 375 375 788 98.0 0 MKFELDTTDGRARRGRLVFERGVVETPAFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPI FLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRDRFDSLGNKN ALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPADKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKSDTAPLDA ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTD FYQRQGRTVPPLNVD >gi|289776635|gb|GG745509.1| GENE 155 157336 - 157668 562 110 aa, chain + ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 195 97.0 2e-50 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKNLMNSIAKGD EVLTNGGLVGRVTKVAETGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL >gi|289776635|gb|GG745509.1| GENE 156 157728 - 159542 2432 604 aa, chain + ## HITS:1 COG:ECs0459 KEGG:ns NR:ns ## COG: ECs0459 COG0342 # Protein_GI_number: 15829713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Escherichia coli O157:H7 # 1 604 12 615 615 1056 92.0 0 MLVVVIVVGLIYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE GAILARFDTTDTQLRAREALLTVLGDKYVVALNLAPATPRWLAALYAEPMKLGLDLRGGV HFLMEVDMDTALGKLQEQNIDSLRSELRDKGIPYATVRKEDNYGLSIVFRDSAARDQAIS YLSPRHRDLVISSQGDNSLKAVMTDERLKEAREYAVQQNINILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQSAAASGRVPGDSEVKETREGQ PVVLYKRVILTGDHITDSTSSMDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE YKDSGKKDANGRAILAKEEEVINIANIQSRLGNSFRITGISNPNEARQLSLLLRAGALIA PIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMILFYKKFGLIATSALIANLVLIV GIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFS SIFDANVTTLIKVIILYAVGTGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVK KLSI >gi|289776635|gb|GG745509.1| GENE 157 159553 - 160524 1435 323 aa, chain + ## HITS:1 COG:ECs0460 KEGG:ns NR:ns ## COG: ECs0460 COG0341 # Protein_GI_number: 15829714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 560 88.0 1e-160 MAQEYTVEQLNHGRKVWDFMRWDYWAFGISGFLLIVSIAIIGVRGFNWGLDFTGGTVIEI TLEKPVDLDQMRDSLQKAGFEEPQVQNFGSSRDIMVRMPPVHDANVSQELGSKVVTVINE STSQNAAVKRIEFVGPSVGADLAQTGALALIAALVCILIYVGFRFEWRLAAGVVIALAHD VVITMGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVS LTQTLHRTLITSGTTLMVILMLFLFGGPILEGFSLTMLIGVSIGTASSIYVASALALKLG MKREHLLQQKVEKEGADQPSILP >gi|289776635|gb|GG745509.1| GENE 158 160663 - 161028 359 121 aa, chain + ## HITS:1 COG:STM0409 KEGG:ns NR:ns ## COG: STM0409 COG3324 # Protein_GI_number: 16763789 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Salmonella typhimurium LT2 # 1 121 1 121 121 168 66.0 2e-42 MNNVINWFEIPVVDMDRAVAFYEPVMQVTLRRETMDCAELAVFPHQDPAPGGALAKFEGI APSAQGAIIYLHTDHLAATLDRIASAGGACVFGPLTLPNDIGTIALFTDSEGNRVGLHQP A >gi|289776635|gb|GG745509.1| GENE 159 161053 - 161748 953 231 aa, chain + ## HITS:1 COG:STM0410 KEGG:ns NR:ns ## COG: STM0410 COG2378 # Protein_GI_number: 16763790 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 224 1 224 230 325 76.0 5e-89 MTRRADRLFQIVQILRGRRLTTAALLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYR LLAGYDLPPLMLTTKESEALIAAIRLLKTWGGEALSQSLESAQEKMLAILPEARRRQAEQ TRLFAPDLGAHRYAKTYFDVIHQAVSGQQVLQLRYQDESGRVTERDVLPLGLFFWGERWL LVAWCELRNDYRNFRLDRCLAVRATERRFSECADRSLSDFLRKVRCDVWEK >gi|289776635|gb|GG745509.1| GENE 160 161791 - 162675 1465 294 aa, chain - ## HITS:1 COG:Ztsx KEGG:ns NR:ns ## COG: Ztsx COG3248 # Protein_GI_number: 15800140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 294 1 294 294 467 88.0 1e-131 MKKTLLAAGAVVALSTSFTAGAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE YEAFAKKDWFDFYGYIDAPVFFGGNSTAKGIWNNGSPLFMEIEPRFSIDKLTNTDLSFGP FKEWYFANNYIYDMGRNDSQEQSTWYMGLGTDIDTGLPMSLSLNVYAKYQWQNYGASNEN EWDGYRFKVKYFVPLTDLWGGSLSYIGFTNFDWGSDLGDDNFYDLNGKHARTSNSIASSH ILALNYAHWHYSVVARYFHNGGQWADDAKLNFGDGDFSVRSTGWGGYFVVGYNF >gi|289776635|gb|GG745509.1| GENE 161 162976 - 163515 759 179 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4017 NR:ns ## KEGG: Kvar_4017 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 179 1 179 179 303 100.0 1e-81 MTRRYLKLAIAGSLFTLTACAQQSEIRQMHQSVSTLSQEMTQLNQQTIKITQQNALNAKS TRGVYLLPEAKTPARLESQIGTLRMSVGSITPDGDGSRLTLRIQGESNDPLPAFTATVAS GQITGTTHSYQEVNVQDQLISAPASILAPSDVDIPLRLNVTPDKVGFIRVHDIQPAAAQ >gi|289776635|gb|GG745509.1| GENE 162 163663 - 164112 701 149 aa, chain + ## HITS:1 COG:STM0415 KEGG:ns NR:ns ## COG: STM0415 COG1327 # Protein_GI_number: 16763795 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Salmonella typhimurium LT2 # 1 149 1 149 149 269 94.0 1e-72 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP FNEDKLRSGMLKALEKRPVSADDVEMAVNHIKTHLRGTGEREVASKMIGNLVMEQLKKLD KVAYIRFASVYRSFEDIKEFGEEIARLQD >gi|289776635|gb|GG745509.1| GENE 163 164116 - 165219 1329 367 aa, chain + ## HITS:1 COG:ZribD_2 KEGG:ns NR:ns ## COG: ZribD_2 COG1985 # Protein_GI_number: 15800143 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Escherichia coli O157:H7 EDL933 # 144 367 1 224 224 374 82.0 1e-103 MQDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAG EKAQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGI DVSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDV QRLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP EHRIVQQAGETLFARLRADERQWPESVRTLLVPEYNGHLDLVLLMMLLGKQQVNSVWVEA GATLAGALLQAGLVDELIVYIAPKLLGNAARGLCALPGLEELSQAPHFKFNEIRQVGPDV CLHLTTA >gi|289776635|gb|GG745509.1| GENE 164 165307 - 165777 589 156 aa, chain + ## HITS:1 COG:ECs0468 KEGG:ns NR:ns ## COG: ECs0468 COG0054 # Protein_GI_number: 15829722 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 258 100.0 4e-69 MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYEL PLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|289776635|gb|GG745509.1| GENE 165 165797 - 166216 549 139 aa, chain + ## HITS:1 COG:STM0418 KEGG:ns NR:ns ## COG: STM0418 COG0781 # Protein_GI_number: 16763798 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 239 97.0 8e-64 MKPAARRRARECAVQALYSWQLSHNDIADVEYQFLAEQDVKDVDVLYFRELLSGVATNSA YLDGLMKPYLSRQLEELGQVEKAVLRIALFELSKRDDVPYKVAINEAIELAKTFGAEDSH KFVNGVLDKAAPVIRPRKK >gi|289776635|gb|GG745509.1| GENE 166 166290 - 167261 1173 323 aa, chain + ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 1 323 1 323 325 548 85.0 1e-156 MACGEFSLIARYFDRVKSARLDVETGIGDDCALLNIPEKKTLAISTDTLVAGNHFLPDID PADLAYKALAVNLSDLAAMGAEPAWLTLALTLPEVDETWLEAFSDSLFVQLDYYDMQLIG GDTTRGPLSMTLGIHGFVPPGRAMKRAGAKPGDWIYVTGTPGDSAAGLAMLQNRLTVDEP SDADYLLARHLRPMPRVLQGQALRDLATSAIDLSDGLISDLGHILKASGCGARIDLDAMP YSDAILRQVEPEQALRWALAGGEDYELCFTVPELNRGALDVALGHLGARFTCIGQIAPES EGLQFIRDGKPVALDLKGYDHFA >gi|289776635|gb|GG745509.1| GENE 167 167254 - 167757 695 167 aa, chain + ## HITS:1 COG:STM0420 KEGG:ns NR:ns ## COG: STM0420 COG1267 # Protein_GI_number: 16763800 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Salmonella typhimurium LT2 # 2 167 6 171 171 278 87.0 3e-75 MRSRDEALRRLSMRNPWHLLATGFGSGLSPVVPGTMGSLAAIPFWYLMTFLPWQLYSLVV MMSICIGVYLCHRTAKDMGTHDHGSIVWDEFVGMWITLMALPTLDWQWVAAGFVIFRIFD MWKPWPIRWFDRNIHGGMGIMVDDIVAGVISAGVLYVIGHHWPIGLL >gi|289776635|gb|GG745509.1| GENE 168 167803 - 168777 1362 324 aa, chain - ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 565 84.0 1e-161 MHYIPLGDTALRVSRLCLGCMTFGEPDRGRHAWTLPEESSRPLIQHAIEGGINFFDTANS YSDGSSEEIVGRALRDFARRDEVVVATKVYHQVGDLAEGLSRAQILRSIDDSLRRLGMDY VDLLQIHRWDYTTPIEETLEALDEVVKAGKARYIGASSMHARQFAQALALQQQNGWARFV TMQDHYNLIYREEENEMLPLCQHNGVAVIPWSPLARGRLTRPWGETTARLVSDEFGKTLY STSEENDAQIAENLADVAEELDASRAQVALAWLLSKPGVAAPIIGPSRQEQLDDLLQAVD LTLSPEQIDKLEAPYQPHPVVGFK >gi|289776635|gb|GG745509.1| GENE 169 168838 - 170700 2529 620 aa, chain - ## HITS:1 COG:STM0422 KEGG:ns NR:ns ## COG: STM0422 COG1154 # Protein_GI_number: 16763802 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 620 1 620 620 1176 91.0 0 MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT VALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV GHSSTSISAGIGVAIAAAKEDKQRRAVCVIGDGAITAGMAFEAMNHAGDIKPDLLVVLND NEMSISENVGALNNHLAQLLSGKLYSTLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG TLFEELGFNYIGPVDGHDVLGLVSTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA VPKFDHTSGVLPKSSGGLPSYSKIFGDWLCETAAKDSKLMAITPAMREGSGMVEFSKKFP DQYFDVAIAEQHAVTFAAGLAIGDYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDR AGIVGADGQTHQGAFDLSFLRCIPDMVVMTPSDENECRQMLHTGYHYSDGPCAVRYPRGS GTGATLEPLASLPIGKGMVKRQGEKIAILNFGTLLPEAAAVADKLNATLVDMRFVKPLDT ALILQLAGEHDALVTLEENAIMGGAGSGVNEVLMAHRRAVPVLNIGLPDYFIPQGTQEEI RADLGLDAAGIEAKIRDWLA >gi|289776635|gb|GG745509.1| GENE 170 170719 - 171618 972 299 aa, chain - ## HITS:1 COG:ispA KEGG:ns NR:ns ## COG: ispA COG0142 # Protein_GI_number: 16128406 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 299 1 299 299 456 86.0 1e-128 MDFPQQLQACVEQANGALRRFIAPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGAMFG VSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL AFSILSDAPMADVSDRDRLAMVSELAQASGVAGMCGGQALDLEAEGQQVDLQALERIHRH KTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLGKRQG ADQQLGKSTYPALLGLEQARKKAHDLIADARRSLDELAAQSLDTSALEALANYIIQRDK >gi|289776635|gb|GG745509.1| GENE 171 171620 - 171862 240 80 aa, chain - ## HITS:1 COG:ECs0476 KEGG:ns NR:ns ## COG: ECs0476 COG1722 # Protein_GI_number: 15829730 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 97 83.0 4e-21 MPKKNEAPASFETALGELEQIVNRLESGDLPLEEALSEFERGVQLARQGQSQLQKAEQRV QILLADSEDSPTTPFTPDAE >gi|289776635|gb|GG745509.1| GENE 172 172044 - 173492 1932 482 aa, chain + ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 401 1 401 402 739 91.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKNYDETLAVVRHWDHIEVRAKDENQR PAIRDALTRIPGIHHILEVEDVPFTSLHDIFEKTLPLWREALEGKTFCVRVKRRGKHEFT SIEVERYVGGGLNQHIETARVKLTDPDVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI EAEEEHFDFSILDKVVEEASNIDIRDIAQQTEAAVVEVETVTGFGANDAILDIRSIDEQE DKPLKVEGVEVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFSNVKVY RP >gi|289776635|gb|GG745509.1| GENE 173 173563 - 174039 376 158 aa, chain - ## HITS:1 COG:CC3077 KEGG:ns NR:ns ## COG: CC3077 COG3832 # Protein_GI_number: 16127307 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 4 157 5 158 158 136 43.0 2e-32 MSRSATDSRDLVISRLLSAPASALWRAWADPALLKTWWCPKPWSTEVLAFDFRSGGAFHT VMHGPDGERSDNPGCFLAVIPQQKIVMTSMLTADYRPAVSPFAMTAIITFADEKDGCRYT ATVLHADDETREQHEQMGFFEGWNIVIDQLNDLAMTLR >gi|289776635|gb|GG745509.1| GENE 174 174090 - 174683 723 197 aa, chain - ## HITS:1 COG:ECs0478 KEGG:ns NR:ns ## COG: ECs0478 COG0693 # Protein_GI_number: 15829732 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 196 3 198 198 346 87.0 2e-95 MSASALICLAPGSEETEAVTTIDLLVRGGVKVTTASVASDGGLTIVCSRGVKLLADAPLV EVADGDFDIIVLPGGIKGAECFRDSPLLVETVRQFHLSGRIVAAICAAPATVLVPHQLFP IGNMTGFPALKEHIPADQWQDKRVVWDPRVNLLTSQGPGTSIDFALKMIDLLVGREKAYE VASQLVMAAGIYNYYEA >gi|289776635|gb|GG745509.1| GENE 175 174646 - 175557 1048 303 aa, chain - ## HITS:1 COG:apbA KEGG:ns NR:ns ## COG: apbA COG1893 # Protein_GI_number: 16128410 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Escherichia coli K12 # 1 303 1 303 303 511 78.0 1e-145 MKVTVLGCGALGQLWLTALCKQGHEVQGWLRVPQPFCSVNVIETDGSVFNESLTANDPDF LASSELLIVTLKAWQVSNAVKHLAGILPVTTPIVLVHNGMGTVEELRGVKQPLLLASTTQ AARRDGNVIIHVAQGTTHIGPAKSYEEDYSYLAEVLQSVLPDVAWHNHIYSATWRKLAVN CVINPLTALKGCKNGDLRHYPQEVAAICQEVAAVMEREGIHTSAENLLFYVEQVIESTAE NISSMLQDIRAQRHTEIDYITGFLLNRARAHGVAVPENARLFELIKRKENEYERVGTDLP RPW >gi|289776635|gb|GG745509.1| GENE 176 175775 - 176266 852 163 aa, chain + ## HITS:1 COG:STM0435 KEGG:ns NR:ns ## COG: STM0435 COG1666 # Protein_GI_number: 16763815 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 163 7 169 169 271 95.0 6e-73 MPSFDIVSEVDLQEARNAVDNASREVESRFDFRGVEATFELNDANKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGTSLDVPEDIVHSGKTWFVEAKLKQGIESAVQKKIVKLIKDSKLK VQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNFRD >gi|289776635|gb|GG745509.1| GENE 177 176309 - 177673 1857 454 aa, chain - ## HITS:1 COG:STM0436 KEGG:ns NR:ns ## COG: STM0436 COG0477 # Protein_GI_number: 16763816 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 6 451 1 446 449 695 85.0 0 MNDNKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLA QAIFQIPFGLLSDRIGRKPLIVGGLLIFVLGSVIAALTDSIWGIILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGVTFAIAMVLGPIVTHQLGLHALFWMIAILATIGIL LTLWVVPNSHNHVLNRESGMVKGCFSKVLVEPRLLKLNFGIMCLHIMLMSTFVALPGQLE AAGFPAAEHWKIYLVTMVISFISVVPFIIYAEVKRKMKRVFLLCVAILLIAEIVLWGAGG YFWELVAGVQLFFLAFNLLEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGALGGW VDGFFDSQTVFLLGALLAMLWLLVASTMSEPPYVSSLRVEVPDGVVVDSALQTRLLNANG VHQALVVPEERSVYIKIDSKVTNRFEIEQLIKGV >gi|289776635|gb|GG745509.1| GENE 178 177833 - 179011 1586 392 aa, chain - ## HITS:1 COG:AGpA638 KEGG:ns NR:ns ## COG: AGpA638 COG0673 # Protein_GI_number: 16119663 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 389 1 389 390 565 66.0 1e-161 MLNGLKPLSRSLRWGMVGGGGTSQIGYSHRCAALRDNVYTLLAGALDVDAERGRAFGEQL GIAPERCYADYQTLFREEAQRPDGIEVVSVTTPNNTHFAITKAALEAGLHVICEKPLCFS AEEARELVDLSKKQNKIVGVTYGYAGYQMIQQARQMIADGLLGEIRIVNMQFAHGFHNQA VELQAESTRWRVTPKFAGPSYVLGDLATHPLFVAETMAPQLNIKRLMCSRQSFVPSRAPL EDNAFVLMEYDNGAVGSMWTSAVNSGAMHSQKVRIVGEKASIEWWDEHPNQLSYEVQGEP ARILERGMPYLSPNALADDRIGGGHPEGLFEAWANLYRRYAQAIDATDRDDRAFLQDFWY PDVEAGLHGVYWVEQCVKSADAGSQWVDFTLP >gi|289776635|gb|GG745509.1| GENE 179 179341 - 180705 1591 454 aa, chain - ## HITS:1 COG:PA0235 KEGG:ns NR:ns ## COG: PA0235 COG0477 # Protein_GI_number: 15595432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 1 414 6 421 448 356 49.0 5e-98 MTQTQRLDVRELINRNPLSRFQKQIIFLGFCVIALDGFDIAIMGFIAPTLKLEWGVSNHQ LGLVISAALIGLALGAIFSGPLADWLGRKKIIINSVFFFGFWTIATAFSHNIEQMMFFRF MTGLGLGAAMPNIGTLVSEYAPERQRSFIITVIFCGFTFGAAAGGFSASWLIPQFGWHSL MALGGILPLLFAPLLIWLLPESVRFLVIKQAPAARIRAILNRLYPGQISDNVTFTLPAQP AAGNAMRIVLSRQYGFGSLMLWLVYFMGLFLVYILGSWLPTLVKAVGMTVSQAAIMTAIY QAGGTLGSLFAGWLMDRINPHRALGMIYAVGGLFTMAMGYAAGSFALLCMLAFISGACLN GANTGMNALSARYYPTQARATGSSWMHGVGRIGAILSAFAGAEMMALNLPFESVFLILGI PAALTVAGLAAKGIFAAGNPPAASPSPASVRGAS >gi|289776635|gb|GG745509.1| GENE 180 180716 - 181534 930 272 aa, chain - ## HITS:1 COG:PA0238 KEGG:ns NR:ns ## COG: PA0238 COG1082 # Protein_GI_number: 15595435 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Pseudomonas aeruginosa # 1 261 1 268 271 172 46.0 8e-43 MNMRTLSLAALTLLDVPPPEQVRIAARTGFTHVGLRLLPATPADPDYDMLGDTPAVRATL SALMETGIRVSDVEIVRLTPGFTLDDRLQRFMETAARLGAGQVLVAGNDDNLQRSADNLA ILAAAGRPYGLTMNLEPMPWTQLRTIADAQAMIAASGREDIGILVDALHFWRAGESLAAL SSLPAHHLNYMQLCDGAAQRPESEQELIRQARSARNVPGEGGLDLHGLMSALPATLPVSL EVPLDGEQGALPPLQRAQLLFNAAQPYLRSCA >gi|289776635|gb|GG745509.1| GENE 181 181594 - 183285 1592 563 aa, chain - ## HITS:1 COG:PA2243 KEGG:ns NR:ns ## COG: PA2243 COG1053 # Protein_GI_number: 15597439 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Pseudomonas aeruginosa # 4 555 10 564 577 506 53.0 1e-143 MSGPVKVDVLVVGSGAAGLSAAVTAAMHGASVMVAEKASVLGGTSAWSGGWLWIPRNPLA RAEGIDEAADAPLTYLQHEMGGEAADVRLQTFLRHGPEMVDFFHHRTAVQFLSGSAMPDF HASPGAASGGRSVTAQPYDGRQLGDWLHRLRPPLETISLAGMGIAGGADTAHFFNATRSP RSALYAVRRLLRHGWQRLRAGRGQHLVNGNALVARLLRSALDAGVRFQLNAPVVRLLQGP QGVSGAVLRSDSGEIHVEAGAVVLACGGFPHDRQRLAQVVPHAAEGYGHFSAAPPDNQGE GIRLGESVGGQFDTRLRHPLAWAPVSRVTLASGQQLMFPHLVERAKPGVIAVLPSGKRFV NEADSYHDFIAALLAATPAGDTPQAWLLADRRALRRYGLGHARPFPFTPTAWLRTGYLLR GNTLGELAKQCAIDANALAETVERFNHFASTGEDVDFHRGASAYNRAQGDHQVTLGPLRE GPFYAVRILPGSLGTFSGLQTDEHARVLDGQQQPIPGLFAIGNDMSSVMRGYYPSGGITL GPAMTFGYLVGKNLAENTIKTKQ >gi|289776635|gb|GG745509.1| GENE 182 183296 - 183616 479 106 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3996 NR:ns ## KEGG: Kvar_3996 # Name: not_defined # Def: NIPSNAP family containing protein # Organism: K.variicola # Pathway: not_defined # 1 106 1 106 106 203 100.0 2e-51 MIYEKRTYTINPLKMADWLALYQSDALAVQTDHLGKLIGFFFTEIGVVNQVVHIWAYESL DDRLVRRARMAQDERWQTFSRKNRELAAVERLESVLMRPTAFSPLQ >gi|289776635|gb|GG745509.1| GENE 183 183630 - 185306 1908 558 aa, chain - ## HITS:1 COG:Cgl2581 KEGG:ns NR:ns ## COG: Cgl2581 COG1053 # Protein_GI_number: 19553831 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 4 553 5 561 563 298 35.0 1e-80 MKSWDVIVIGSGAAGFAAAVTASCKGLSVLMLEKAGQFGGTSAISGGAVWLHDTDQARAA GKSGSAEAMKTYLRTIIGESQYREDLAEAFVSAGREALAFLEREGAVKYSLRPLSPDYYP DEPGAVDVGRALEVVEYDGRELGDAFRDLRSPPPGMLLFGGMMVNRVDIQHFLDMRRSLR SLAHCTRLLLRYARDRVKYPRGTRLAMGNALIARMATTALRKGMNLRLNVNVLALCEAQG AVRGVEIEFQGQRETLHARRGVVLAAGGFAAGALAARYRPHTREHFTMSPPANDGAALHL AAALNAREGADRASNFFWAPVSVLTRADGSEERFPHLVTDRAKPGVIAVNQRAVRFVNES SSYHHFASAMQDAAENGPCFLLCDAQAMKRYGLGLARPAPVNNDALVAAGYLHKADTLAA LAQQLGLDAQTLSETVARYNRDAAQGVDREFAKGGNSYNRAMGDPGHQPDACNAPLLSAP FYAIKLYTGDLGTSRGLVTTADAQVVNAEGKPIAGLYAVGNDMDSLMAGTYPGPGITLGP GLTFGYLAACHLAQHSPH >gi|289776635|gb|GG745509.1| GENE 184 185303 - 186124 972 273 aa, chain - ## HITS:1 COG:BMEII0871 KEGG:ns NR:ns ## COG: BMEII0871 COG0169 # Protein_GI_number: 17989216 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Brucella melitensis # 1 264 12 272 283 139 35.0 4e-33 MVSGTTQVVAVIGHPIAQVKSPDNFNRYFAEQHMDSVMIPVDIAPDAVVDYLNALRGWQN MTGVLVTVPHKQRAAALVDELTPRARRLNAINVIRKLADGRLQGDMLDGVGFQLAAEAQG FQPAGKQALLSGCGGVGSAIAWGLCEAGIRQLALHDQNPTIRQRLHDLLAEAFPAVQLSA LPDTLHGVDLLVNGSPAGMAGFDELPLPQALLDTLDSATHVADVVTAPVMTPLLTFAAAR GCRVQTGPEMALAQMTLMGQFIGAIPPAQGAAA >gi|289776635|gb|GG745509.1| GENE 185 186277 - 187035 826 252 aa, chain + ## HITS:1 COG:SMb20586 KEGG:ns NR:ns ## COG: SMb20586 COG1414 # Protein_GI_number: 16265246 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 9 250 5 246 251 170 37.0 2e-42 MQNTIHPRDLIVGLQKGLALIQLFSKTCPKLTVAQAAKMSGLTQSAARRFLLTLLHERYL QTDGRYYWLTPKTLRLGQAYVDSAQFPRMVRPIVEYIASRTEEHASVGVVDEDELVYIAR SRHTPFNSTSVRLGERVPIFCTAGGRLWLASLPEAECEAVLQRITREQRTPYTVTDVASL MEKIAQVRRQGYATIEQEFEIGMLVLAVPLTDREGTWWGALSLTSHQSRTSLEALCHDHL DLLYSAQAMLVS >gi|289776635|gb|GG745509.1| GENE 186 187072 - 187404 494 110 aa, chain - ## HITS:1 COG:no KEGG:KPN_00389 NR:ns ## KEGG: KPN_00389 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 110 1 110 110 136 96.0 3e-31 MKELTLNEMEYISGGFNLFGAASGFASFVANSGVGFTSFVLTSGTAFASFVGDSAMAFGS FLTGQSNWETFVTAGKENWGSFVNTAGNSWNTFVDNAASDWNSFLNNASA >gi|289776635|gb|GG745509.1| GENE 187 187655 - 188542 1166 295 aa, chain - ## HITS:1 COG:ECs0482 KEGG:ns NR:ns ## COG: ECs0482 COG0109 # Protein_GI_number: 15829736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Escherichia coli O157:H7 # 1 294 2 295 296 506 95.0 1e-143 MFKQYLQVTKPGIIFGNLISVIGGFLLASKGHIDYPLFVWTLLGVSLVVASGCVFNNYID RDIDRKMERTKNRVLVKGLISPEASLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYV GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGDFDSGAAILLAIFSLWQMPHSYAIA IFRFKDYQAANIPVLPVVKGISVAKNHITLYIVAFAVATLMLSLGGYAGYKYLVVAAAVS VWWLGMALRGYKVADDKVWARKLFVFSIVAITALSVMMSVDFMVPDSHSLLAYVR >gi|289776635|gb|GG745509.1| GENE 188 188554 - 188829 415 91 aa, chain - ## HITS:1 COG:STM0440 KEGG:ns NR:ns ## COG: STM0440 COG3125 # Protein_GI_number: 16763821 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Salmonella typhimurium LT2 # 1 91 19 109 109 108 84.0 3e-24 MTGFILSIILTVIPFAMVMSGSASHAVILGTILVTAVVQIVVHLVYFLHMNSKSDEGWNL TAFIFTVIIIAIVVVGSIWIMWNLNYNMMMH >gi|289776635|gb|GG745509.1| GENE 189 188883 - 189494 783 203 aa, chain - ## HITS:1 COG:cyoC KEGG:ns NR:ns ## COG: cyoC COG1845 # Protein_GI_number: 16128415 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Escherichia coli K12 # 1 203 1 204 204 338 90.0 3e-93 MATDTLAHTAHAHEHGHHDTGPMKVFGFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGK DIFELPFVLVETALLLFSSITYGMAAIAMYKNNKSQVVSWLALTWLFGAGFIGMEIYEFH HLIMEGFGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLS LFWHFLDVVWICVFSVVYLMGAM >gi|289776635|gb|GG745509.1| GENE 190 189484 - 191475 2339 663 aa, chain - ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1175 91.0 0 MFGKLTLDAVPYHEPIIVVTVAAIIIGGLALLAAITYFGKWSYLWNEWLTSVDHKRLGIM YVIVAIVMLLRGFADAVMMRSQQVLASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI GLMNLVVPLQLGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIE YSPGVGVDYWIWALQLSGIGTTLTGINFFVTIIKMRAPGMTMFKMPVFSWASLCANILII ASFPILTVTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSE IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG VKIFNWLFTMYQGRIVFNSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF HNVIIGGVVFGCFAGLTYWWPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMT RRLSQQIDPQFHPMLVVAACGAALIACGILCQLIQFYVSIRDRDQNRDLTGDPWGGRTLE WATSSPPPFYNFAIVPQVHERDAFWEMKEKGEAYKQPAHYEEIHMPKNSGAGIVIAAFAT VFGFAMIWHIWWMAIASFIGIVATWIIKSFDEDVDYYVPVAKVEKLEKQHFDEINKAGLK NGN >gi|289776635|gb|GG745509.1| GENE 191 191495 - 192403 832 302 aa, chain - ## HITS:1 COG:cyoA KEGG:ns NR:ns ## COG: cyoA COG1622 # Protein_GI_number: 16128417 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Escherichia coli K12 # 1 302 13 315 315 549 89.0 1e-156 MSLIASTVLLSGCDSALLDPKGQIGLEQRSLILTAFGLMMIVVIPAVLMAVGFAWKYRAS NKDAKYSPNWSHSNKVEAVVWTVPILIILFLAVLTWKTTHALEPSKPLAHDEKPITIEVV SMDWKWFFIYPEQGIATVNEIAFPANVPVHFKVTSNSVMNSFFIPRLGSQIYAMAGMQTQ LHLIADEAGTYDGISASYSGPGFSGMKFKAIATPDRATFDQWVEKAKQSPNSMDSMAAFD KVAVPSEYNKVEYFSNVKPDLFKDVVNKFMSHESMNMSKPEGEHAAHDGMEGMDMSHAET AH >gi|289776635|gb|GG745509.1| GENE 192 192919 - 194394 1798 491 aa, chain - ## HITS:1 COG:ECs0487 KEGG:ns NR:ns ## COG: ECs0487 COG0477 # Protein_GI_number: 15829741 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 490 1 490 491 744 86.0 0 MSSHYLRIFQQPKSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYV FKFLWSPLMDRYTPPFLGRRRGWLLTTQVLLLLAIAAMGFLEPVSQLRWMAALAVVIAFC SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADRYLGWQGMYWLM AALLVPCIIATLLAPEPSDVIPVPRSLEQAVAEPLRDFFGRNNAWLILLLIVLYKLGDAF AMSLTTTFLIRGVGFDAGEVGMVNKTLGLFATILGALYGGVLMQRLTLFRALLIFGVLQG VSNAGYWLLSITDKHLYSMATAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL SAVGRVYVGPIAGWFVEAHGWSTFYLFSVVAAVPGIVLLLLCRQTLEHTQRTASFMPRSE YPQAYALALRILALGCLLLAVWLVLLIMNALDYTAFSFLSGLLEVAALTAVGGILFGGLL DYLALRKTRLI >gi|289776635|gb|GG745509.1| GENE 193 194438 - 195016 661 192 aa, chain - ## HITS:1 COG:yajG KEGG:ns NR:ns ## COG: yajG COG3056 # Protein_GI_number: 16128419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 192 35 226 226 328 91.0 5e-90 MLKKILFPLVAMFMLAGCATPPTTIEVSPKITLPQQDPSLMGVTVSINGADQRPDQALAK VTRDNQQVTLTASRDLRFLLQEVLEKQMTARGYMIGPNGAVDLQIIVNKLYADVSQGNVR YNIATKADIAIIATAANGTKMTKNYRASYSVEGAFQASNKNIADAVNSVLTDTIADMAQD TSIHDFIKQNAR >gi|289776635|gb|GG745509.1| GENE 194 195319 - 195636 352 105 aa, chain + ## HITS:1 COG:STM0446 KEGG:ns NR:ns ## COG: STM0446 COG0271 # Protein_GI_number: 16763827 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 197 91.0 3e-51 MMIREQIEAKLRAAFDPMYLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMI YGTLTEELSNTVHALALHTYTIKEWEALQDTVFASPPCRGAGSIA >gi|289776635|gb|GG745509.1| GENE 195 195982 - 197280 1737 432 aa, chain + ## HITS:1 COG:STM0447 KEGG:ns NR:ns ## COG: STM0447 COG0544 # Protein_GI_number: 16763828 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Salmonella typhimurium LT2 # 1 432 1 432 432 720 95.0 0 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA SVRQDVLGDLMSRHFVDAIIKEKINPAGAPNYVPGEYKLGEDFTYAVEFEVYPEVELQGL DAIEVEKPVVEVTDADVDTMLETLRKQQATWKDKDGAVDAEDRVTIDFTGSVDGEEFEGG KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFVINLKKV EERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAIEGLVKANEI DVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNEL KADEERVKGLIEEMASAYEDPSEVVEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVSEK ATSFNELMNQQA >gi|289776635|gb|GG745509.1| GENE 196 197591 - 198214 835 207 aa, chain + ## HITS:1 COG:STM0448 KEGG:ns NR:ns ## COG: STM0448 COG0740 # Protein_GI_number: 16763829 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 412 99.0 1e-115 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER DTERDRFLSAAEAVEYGLVDSILTHRN >gi|289776635|gb|GG745509.1| GENE 197 198465 - 199739 1801 424 aa, chain + ## HITS:1 COG:ECs0492 KEGG:ns NR:ns ## COG: ECs0492 COG1219 # Protein_GI_number: 15829746 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 811 98.0 0 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RSALPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGL IPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFSLEGAELEFRDEALDAIAK KAMARKTGARGLRSIVEAALLDTMYDLPSMDDVEKVVIDESVIEGQSKPLLIYGKPEAQQ ASGE >gi|289776635|gb|GG745509.1| GENE 198 199923 - 202277 3011 784 aa, chain + ## HITS:1 COG:STM0450 KEGG:ns NR:ns ## COG: STM0450 COG0466 # Protein_GI_number: 16763831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Salmonella typhimurium LT2 # 1 784 1 784 784 1465 98.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST DEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLDSP AIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADK QSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQ VPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGV GKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAG VRSLEREISKLCRKAVKQLLLDKSLKHIEINGENLHDYLGVQRFDYGRADSENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINADFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPFGMQV VTAK >gi|289776635|gb|GG745509.1| GENE 199 202487 - 202759 235 90 aa, chain + ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 124 90.0 6e-29 MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPGFRAGKALKDAVN >gi|289776635|gb|GG745509.1| GENE 200 202974 - 204848 2700 624 aa, chain + ## HITS:1 COG:ybaU KEGG:ns NR:ns ## COG: ybaU COG0760 # Protein_GI_number: 16128426 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli K12 # 1 623 1 623 623 890 79.0 0 MMDNLRTAANSVVLKIIFGIIIVSFILTGVSGYLIGGGKNYAAKVNGQEIGRGQFENAVA SERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLDQYARELGLSISDEQVKQA IFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTTQQLINAIAGTDFMLPGES DQLAALVSQQRVVREATINVNALAAKQTVSDEEINAFWQQNQARFMAPEQFRVSYIKMDA ASMQESASDEEIQSWYDQHKDQFTQPQRNRYSVIQTKTEADAKAVLAELQKGADFATLAK EKSTDIISARNGGDMGWMEEASTVPELKDAGLNEKGQLSGVIKSSVGFLVARLDDVQPAQ VKPLADVRNDIAAKVKQEKALDAYYALQQKVSDAASNDNESLAGAAQVAGLKVVETGWFG RDNLPEELNFKPVADAIFNGGLVGENGAPGSNSDIITVDGDRAFVLRISEHKAEAVKPLA EVKAQVSDIVKHNKAEQQAKLDADKLLAALKDGKGDEAMKAAGLSFGAPQTLSRTGQDPL SQLAFTLPLPQQGKPVYGVGSNMQGDVVLVALDEVKAGNMPEEQKKAMVQGITQNNAQIA FEALMSNLRKAAKIKLGDSIDQQQ >gi|289776635|gb|GG745509.1| GENE 201 204997 - 205365 475 122 aa, chain + ## HITS:1 COG:STM0453 KEGG:ns NR:ns ## COG: STM0453 COG1555 # Protein_GI_number: 16763834 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Salmonella typhimurium LT2 # 1 122 1 124 124 110 62.0 5e-25 MKYGIKTLMAAGVLVFAVGVQGALAAPASGKAAVNKENVQATASAKAEAVPGDTDNGATK VSINHASAEQLAQALNGVGLKKAQAIVSYREEYGPFKTLDDLKQVPGMGSALVERNLAHL TL >gi|289776635|gb|GG745509.1| GENE 202 205477 - 205878 626 133 aa, chain + ## HITS:1 COG:STM0454 KEGG:ns NR:ns ## COG: STM0454 COG0824 # Protein_GI_number: 16763835 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Salmonella typhimurium LT2 # 1 130 1 130 132 226 86.0 1e-59 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININY RRPAVLGDVLTVSSKLEQLNGKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLE GELREKLDQMNLR >gi|289776635|gb|GG745509.1| GENE 203 205990 - 206691 943 233 aa, chain - ## HITS:1 COG:ECs0498 KEGG:ns NR:ns ## COG: ECs0498 COG0603 # Protein_GI_number: 15829752 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli O157:H7 # 1 230 1 230 231 445 90.0 1e-125 MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKV LDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAII TGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALADFWGQLDL VRQETLTCYNGIKGDGCGQCAACNLRANGLNQYLGDKVGVMAVMKQKTGLAQA >gi|289776635|gb|GG745509.1| GENE 204 206758 - 208458 1648 566 aa, chain - ## HITS:1 COG:STM0456 KEGG:ns NR:ns ## COG: STM0456 COG4533 # Protein_GI_number: 16763837 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 562 1 562 566 817 71.0 0 MRLLHRLNQYQRLWQPSAGAPQQVTVGELAERCFCSERHVRTLLRQAQEAGWLSWQASSG RGKRGQLSFHKTPESLRNEMMEQALNNGQQQNALELAQLAPVELKALLHPFLGGQWQNNT PTLRIPYYRPLEPLRPGFLPGRAEQHLAGQIYAGLTRFDEGDNMPIGDLAHHWQVSPDGL RWHFYIRSTLYWHNGDAVQTAQLRQRLRLLLELPALRTLFASISRIDVTHAQCLTITLHR PDYWLPFRLASYCSVLAHPDDPAIGCGPFRLKRFSPELVRLENHPRYHLQHPLIQAVEYW ITPQLFDRDLGTSCRHPVQITIGDREELHNLRQVSNRISLGFCYLTLRHSPRLSKTQAQR LVSIIHHSSLLETLPLEEDLITPSHEVLPGWSIPQGPENNAVPLPARLTLLYHLPVELHA MAEQLRQRLALLGCELTIIFHDAKNWEGCQHLGQADLMMGDRLIGEAPEYALEQWLRCDM LWPNLLTGAQYAHLQATLDAVQSQPDARSRNDALRNVFNSLMEDAIMTPLFKYNYRISAP PGVNGLRLNARGWFDFASAWLPASLT >gi|289776635|gb|GG745509.1| GENE 205 208586 - 209404 794 272 aa, chain + ## HITS:1 COG:ECs0500 KEGG:ns NR:ns ## COG: ECs0500 COG0561 # Protein_GI_number: 15829754 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 272 5 276 276 437 76.0 1e-122 MAKLAAFDMDGTLLMPDHRLGEQTLTALKRLRERNITLTFATGRHVLEMHHVIGQFSLDA FLITGNGTRIHSREGEELYRQDLAPEAAEAVLHSKWDTQASMHVFNDGGWFTGQARPELL QAHVFSGFHYQLCDPKRMSAQHVTKICFCGDHDDLRRLRIQLNETLGDRAFLCFSAMDCL EVLPVGCNKGAALAVLSQHLGFTLQECMAFGDAMNDREMLGSVGRGFIMGNAMPQLKAEL PHLPVIGDCRHQAVSHFLTHWLDNPDLPYSPE >gi|289776635|gb|GG745509.1| GENE 206 209449 - 210501 1365 350 aa, chain - ## HITS:1 COG:STM0458 KEGG:ns NR:ns ## COG: STM0458 COG0031 # Protein_GI_number: 16763839 # Func_class: E Amino acid transport and metabolism # Function: Cysteine synthase # Organism: Salmonella typhimurium LT2 # 1 347 2 348 351 622 85.0 1e-178 MNSAWVKHAISEINADYQRSADTHLIRLALPAFPGIHLYLKDESTHPTGSLKHRLARSLF LYGLCNGWIKEGTPIIESSSGSTAVSEAYFARLLGLPFIAVMPSCTAKRKIEQIEFYGGR CHFVQSACEIYDASETLARELNGHYMDQFTFAERATDWRGNNNIADSIFRQMSHEPHPQP SWIVMSAGTGGTSATIGRYIRSQGHETQLMVVDPQNSVFLEYWQTRDATLRSPVGSKIEG IGRPRVEPSFIPDVVDEMLRVPDAASVATALWLETQLGRKVGASTGTNMWGVLQLAARMR EEGRTGSIVTLLCDSGERYLETYYNPQWVAANIGDIAPWQAEIAALVGRR >gi|289776635|gb|GG745509.1| GENE 207 210617 - 211075 472 152 aa, chain + ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 152 30 181 181 277 88.0 5e-75 MLDKIDRKLLALLQEDCTLSLQALADAVNLTTTPCWKRLKRLEDEGILRGRVALLDAEKV GLGLTAFVLIKTQHHSSDWYGHFVSEVTQMAEVLGFWRMAGEYDYLLRVQVADMKRYDDF YKRLVNSVPGLSDVTSSFAMEQIKYTTALPVE >gi|289776635|gb|GG745509.1| GENE 208 211118 - 212890 2080 590 aa, chain + ## HITS:1 COG:ECs0502 KEGG:ns NR:ns ## COG: ECs0502 COG1132 # Protein_GI_number: 15829756 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Escherichia coli O157:H7 # 1 590 1 590 590 1008 84.0 0 MRLFAQLSWYFRREWRRYLGAIALLAIIAVLQLIPPKVVGIVVDGVTQQHYTAEKVWMWI GALVLVAVMVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPAFYLRHRTGDLIARA TNDVDRVVFAAGEGVLTLVDSMVMGCAVLIVMSTQISWQLTLLALLPMPLMALAIKRNGD ALHERFRVAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSAQFAADAADTGAKNMRVARI DARFDPTIYIAIGAANLLAIGGGSWMVIHGSLTLGQLTSFVMYLGLMIWPMLALAWMFNI VERGSAAYGRIRTMLEEAPAVDDGTEAVPAGRGVLQVAIRNFIYPQASKPSLEQVNFTLQ PGQMLGICGPTGAGKSTILALLQRHFDVTSGEIRFHDLPLPRLQLDSWRARLAVVNQTPF LFSDTVANNIALGKPDATPAQIERVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQR ISIARALLLEAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEI LVLQHGHIAQRGRHEALAVQPGWYRDMYRYQQLEAALDEVPQAQEEALDA >gi|289776635|gb|GG745509.1| GENE 209 212883 - 214661 228 592 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 565 135 355 398 92 34 4e-17 MRSFTELWPTLKRLLAYGSPWRKPLAIAVGMMWIAAAAEVSGPLLISYFIDNMVAKHTLP LKLVAGLAVAYIGLQLLAALLHYNQSLLFNRAAVGVVQQLRSDVMDAALHQPLSEFDTQP VGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIAIFPAVLI VMIIYQRYSTPIVRRVRAWLADINDGFNEVINGMGVIQQFRQQARFGERMREASYAHYLA RMQTLRLDGFLLRPLLSLFSSLVLCGLLMLFGFSAVGTIEVGVLYAFISYLGRLNEPLIE LTTQQSMLQQAVVAGERVFELMDRPRQAWGSDDAPLSSGRVEIDHLSFAYRGDRLVLQDI SLDIPSRSFVALVGHTGSGKSTLASLMMGYYPLTHGEIRIDGRPLASLSHSALRRGIAMV QQDPVVLADTFYANVALGRDISETQVWEALEAVQLAEVARSMSDGLYTQLGEQGNNLSVG QKQLLALARVLVETPQVLILDEATANIDSGTEQAIQQALAKVRQHTTLVVIAHRLSTIVE ADTILVLHRGQAVERGTHQQLLAAKGRYWQMYQLQLAGEELAASAREESLSA >gi|289776635|gb|GG745509.1| GENE 210 214905 - 215243 507 112 aa, chain + ## HITS:1 COG:ECs0504 KEGG:ns NR:ns ## COG: ECs0504 COG0347 # Protein_GI_number: 15829758 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 194 97.0 4e-50 MKLVTVVIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVK IDVAIADDQLDEVIDVISKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL >gi|289776635|gb|GG745509.1| GENE 211 215277 - 216563 1556 428 aa, chain + ## HITS:1 COG:ECs0505 KEGG:ns NR:ns ## COG: ECs0505 COG0004 # Protein_GI_number: 15829759 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 672 89.0 0 MKMATMKSGLGALALLPGLAMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRG KNVLSMLTQVIVTFGLVCVLWVIYGYTLAFGTGGSFFGSFDWVMLKNIELKALMGTFYQY IHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWMTLSYVPIAHMVWGGGLLATHGA LDFAGGTVVHINAAVAGLVGAYMMGKRVGFGKEAFKPHNLPMVFTGTAILYVGWFGFNAG SASAANEIAALAFVNTVVATAAAILAWTFGEWALRGKPSLLGACSGAIAGLVGVTPACGY IGVGGALIVGIASGLAGIWGVTALKRWLRVDDPCDVFGVHGVCGIVGCILTGIFAATSLG GVGYAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKVADMTVGLRVPEEQEREGLDVNS HGENAYNA >gi|289776635|gb|GG745509.1| GENE 212 216615 - 217478 1180 287 aa, chain - ## HITS:1 COG:ECs0506 KEGG:ns NR:ns ## COG: ECs0506 COG1946 # Protein_GI_number: 15829760 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 509 88.0 1e-144 MSQALSNLLALLDLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPVERLVHSF HSYFLRPGDSQKPIVYDVEVLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEHGYEHQKA MPPAPSPDGLHSETDIARKLAHLLPPQVKDKFLCDKPLEIRPVEFHNPMKGHIAEPVRQV WLRANGAVPDDLRIHQYLLGYASDFNFLPVALQPHGVGFLEPGMQVATIDHSMWFHRPFN INEWLLYSVESTSASSARGFVRGEFYTQDGTLVASTVQEGVMRNRNA >gi|289776635|gb|GG745509.1| GENE 213 217700 - 218191 556 163 aa, chain + ## HITS:1 COG:STM0465 KEGG:ns NR:ns ## COG: STM0465 COG3126 # Protein_GI_number: 16763846 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 161 1 159 189 162 67.0 2e-40 MKFAYMFSALAVAATLTACANHHSTSSSTQAAAPDPYGIATLSVAQQQPSVTGTINIRQR IALPPDAVLTVTLSDASLADAPARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLS AAIAVNGQLMFITDTVQTVINQGGTHADLTLVPVTQTAVPVAQ >gi|289776635|gb|GG745509.1| GENE 214 218229 - 218540 288 103 aa, chain - ## HITS:1 COG:STM0466 KEGG:ns NR:ns ## COG: STM0466 COG3695 # Protein_GI_number: 16763847 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Salmonella typhimurium LT2 # 1 103 27 129 129 184 91.0 3e-47 MDPHDTFPQRVWHIVASIPEGYVATYGDVARLAGSPRAARQVGGVLKRLPEGSTLPWHRV VNRHGDISLTGPDLQRQRQALLAEGVQVSGSGHIDLQHYRWVY >gi|289776635|gb|GG745509.1| GENE 215 218609 - 219016 518 135 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3963 NR:ns ## KEGG: Kvar_3963 # Name: not_defined # Def: dTDP-glucose pyrophosphorylase # Organism: K.variicola # Pathway: not_defined # 1 135 1 135 135 229 100.0 3e-59 MTDSSPQTITLPLPAIEGMTIAFHGVNYLRPEKMLDFATISQTPVRAVTPLALLYSTVGV LRQVELRKLPVYISGRVVYPISSLTMPGLRAKLIINATSQRLKFLESLIASSPSDNVHGM QILGLALTFTVEQPA >gi|289776635|gb|GG745509.1| GENE 216 219664 - 219921 330 85 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3962 NR:ns ## KEGG: Kvar_3962 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 74 1 74 85 103 100.0 2e-21 MTTVVLNVKIDAELKEKLRHYAEVNNENLGTATEKLLQLAFQLEESAGEAGVTEEDIDSQ HTEEEATPLTPKEIKALRKLLKKKK >gi|289776635|gb|GG745509.1| GENE 217 219918 - 220133 253 71 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3961 NR:ns ## KEGG: Kvar_3961 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 71 1 71 71 149 100.0 4e-35 MKQQFSTASNYSEACDMLRSGYVKHVRLNWNIGSDEFFRIASDWCDTGAKIKKDEDGFII SLKGFPIPRQH >gi|289776635|gb|GG745509.1| GENE 218 220268 - 221695 1346 475 aa, chain - ## HITS:1 COG:YPO1960 KEGG:ns NR:ns ## COG: YPO1960 COG1167 # Protein_GI_number: 16122206 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Yersinia pestis # 28 439 4 444 473 140 28.0 5e-33 MSTRRFGTQSLVRLLGNWQESTSRTPLWRQLAEALRLLILDGRLTLQTRLPGERELAAAL NVSRTTIASALGQLREEGFLYSRQGSGSRIVLPERPADLPPPSGIPSSLNLSTAALSAGP EVHQAFQHAMTLLPPYLGQTGYDQQGLPVLREAIARRYSERGLPTRPDEVMVVNGALSAF ALILRLFTGPGDRVVIDAPTYPMAISAIQGASCRPVGVALPQQGWDCDGLAATIAQTAPR LAWLMPDFHNPTGRCMDAPTRQRVADIAARTRTTLVIDETMVDLWYNAPPPLPLACFNPD AAVITIGSAGKSFWGGLRIGWIRASARTIASLIQARDSLDLGTPLLEQLACSWLLANAAT LLPPRREMLKARRDMCETLMAEYFPRWRFSPPEGGLSFWVELPDMLATLFSARAESQGIH IGTGTRFGLEGAFDRYLRLPFTLPDEALRQAFSTLQPLWQSLAEQKENTRLRKII >gi|289776635|gb|GG745509.1| GENE 219 221784 - 222398 962 204 aa, chain + ## HITS:1 COG:HI0522 KEGG:ns NR:ns ## COG: HI0522 COG2364 # Protein_GI_number: 16272466 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Haemophilus influenzae # 8 184 29 205 218 109 37.0 3e-24 MLRRLLQLYIGLVLYGVSTALFVHANLGADPWDVFHLGVAKQLGISFGTVIILTGAAVLL LWIPIRQMPGLGTVSNVIVLGLAADATLAVLPPLESLVARSVLLVGAIVLNAIATGMYIG AGFGPGPRDGLMTGLHARTGWSLRGIRTAIELTVLVIGWLLGGKFGVGTVIYALSIGPLI QLCLPWFRQPVSRKAVSTPQEIVS >gi|289776635|gb|GG745509.1| GENE 220 222443 - 223300 746 285 aa, chain - ## HITS:1 COG:STM3024 KEGG:ns NR:ns ## COG: STM3024 COG2215 # Protein_GI_number: 16766326 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 285 1 286 288 303 57.0 2e-82 MNDFTSLLQQGNAWLFIPSAILLGALHGLEPGHSKTMMAAFIVAVRGTLKQAVLLGLAAT VSHTAVVWLIAMAGLWFGRGWNAQTSEPWFQLISGIAIVLIACWMLWRTWRESQPHTHHD HHHEHDHHHEHEHHHEHDHHHEHDHHHEHASSSAAPLVAEEWQDAHQRAHAQEINRRFDG RQVTTGQIVLFGLTGGLIPCPASITVLLICLQLKKFSLGATLVLGFSVGLALTLVASGAI AALSLKQATRRWPWLNDVSRKAPWFSGLLIIVVGIYMMLHGLSGL >gi|289776635|gb|GG745509.1| GENE 221 223492 - 223737 424 81 aa, chain + ## HITS:1 COG:RSp0553 KEGG:ns NR:ns ## COG: RSp0553 COG1937 # Protein_GI_number: 17548774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 2 81 11 90 90 99 71.0 1e-21 MLLTRLKKIQGQSSALEKMLNREHECAEVLQQLAAIRGAVNGMMLQVIQGHLTDHVVKEP EETQREADLETVMQVIKSYLK >gi|289776635|gb|GG745509.1| GENE 222 223800 - 225359 1743 519 aa, chain - ## HITS:1 COG:ylaB KEGG:ns NR:ns ## COG: ylaB COG4943 # Protein_GI_number: 16128441 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli K12 # 1 516 3 518 518 550 53.0 1e-156 MRTRHLVALFTGVLILAIILPISLSIWQAARQAKLQFYRELDDYSNRIVVRTLQVADQAR EALREADSHTAASCSPEHLLTLRRIAYTHRYIQEVLWLRDSVPQCSSLEDHSVAVTFPPP DHIAPDGYRTWLTSINDLGLNHQMTAMGSQQHMVMIDPISFIDVVPASEEKIHTMLFGLD HLKMVISSQPLPDTVWQRIKDPHVNMLTLDNTVYRIQRIPELGSGIVTWSSTLPLQQRIR QQLIFWLPVGIFTSLLATWLLLRLLRHLRSPRNSMLDALNSEAIQVYYQPIISLQDGKIA GAEALARWQQPDGTFLSPDIFIPLAEQTGLITQLTEDIVRKIFTDLGPWLRQRPEVHISI NLSVDDLRSPTLPTLLHDQLQHWGIAAEQIILEITERGFVDPETTMPVIAHYRQAGHRIS IDDFGTGYSSLSYLQKLDVDTLKIDKSFVDTLEYRPLTPHIIEMAKALNLATVAEGVETE SQRDWLRQHGVQYAQGWLYSKALPKEQFILWAENNLHVH >gi|289776635|gb|GG745509.1| GENE 223 225593 - 226702 1305 369 aa, chain - ## HITS:1 COG:YPO0857 KEGG:ns NR:ns ## COG: YPO0857 COG3839 # Protein_GI_number: 16121165 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 366 1 364 366 618 80.0 1e-177 MSNIRLRNVTKRFGSTVTLHQVNLDIEDGEFAVFVGPSGCGKSTLLRMIAGLEEVSEGEV LIGDEVMNDVVPARRGVAMVFQSYALYPHMTVAENMGYGLKVNKVPKTEIRRQVEMVAKT LQLSHLLDRKPKQLSGGQRQRVAIGRAIVRNPRVFMFDEPLSNLDAELRVDMRLHIARLH QELKTTMVYVTHDQVEAMTLADKIVVMNYGKVEQMGSPMALYYNPVNKFVAGFIGSPKMN FLPAIVSDWQPERLTVTLAQDHQLVLNIATQPLKPGAAVTLGIRPEHLTPDVTTGTVVEF QCEVVERLGNNTYLFGQCYGHDNVKVLLPGDVHFRPWQKINLAFDERFCMVFDENDLRIS ADIPAPDAH >gi|289776635|gb|GG745509.1| GENE 224 227059 - 228291 1809 410 aa, chain + ## HITS:1 COG:YPO0856 KEGG:ns NR:ns ## COG: YPO0856 COG2182 # Protein_GI_number: 16121164 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Yersinia pestis # 1 410 10 420 420 602 76.0 1e-172 MKKNTLAALILTTLAAGQLTSLQAHAAGLLNVWEDIKKSAGIKTAVSDFEKQYNVKVNLQ EMPYAQQLEKLRLDGPAGIGPDVLVIPNDQLGGAVVQGLLSPLSVDQAKQDAFTPASINA FRMDNALYGIPKAVETLVLIYNKDLIDKPLDSLQAWLDYSKTQREQNKYGLLAKFDQIYY SWGAIGPMGGYIFAKNDSGGFNPQQVGLNTPGAVEAVTFLKKFYAEKVFPAGILGDNGLN AIDSLFTEKKAAAVINGPWAFQPYEAAGINYGVAPLPTLPDGKPMSSFLGVKGYVVSTWS KDKALAQQFIEFINQPQYVKARYVATGEIPPLKAMIDDPVIKNDQKASAVAIQSARAVAM PGIPEMGEVWGPANAALELSLTGKQAPQAALDNAVKQITMQIEAMQASNQ >gi|289776635|gb|GG745509.1| GENE 225 228354 - 229661 1961 435 aa, chain + ## HITS:1 COG:YPO0855 KEGG:ns NR:ns ## COG: YPO0855 COG1175 # Protein_GI_number: 16121163 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 1 435 1 435 435 725 89.0 0 MSIHSSENFSDARGPGRHAWCGLLLAIVPGFGQFYHRQWLKGLVFLVLLSSFLGIFYDFL REGLWGLYTLGEEVPRDNSIFLLAEGIISVLIVAFGVLIYFLSLRDAWLNGKKRDEGIAL NSVRKQYQMLLSDGFPYLMITPGFILLVFVVIFPILFGFAIAFTNYNLYHTPPAKLVDWV GLKNFVNIFTLSIWRSTFLDVLQWTVVWTLLATTLQCTVGVLLAILVNQKDLRFKPLIRT IFILPWAVPGFVTILVFAGMFNDSFGVINNAILSFFGISPKAWLTDPFWTKTALIMMQTW LGFPFVFAMTTGVLQAIPDDLYEAATMDGASAFTRLRTITLPLVLYAIAPIIITQYTFNF NNFNIIYLFNNGGPAVAGSNAGGTDILVSWIYKLTMSSSQYAIAATITILLSIFVVGLAL WQFRATKSFKNDDMA >gi|289776635|gb|GG745509.1| GENE 226 229672 - 230523 1250 283 aa, chain + ## HITS:1 COG:YPO0854 KEGG:ns NR:ns ## COG: YPO0854 COG3833 # Protein_GI_number: 16121162 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Yersinia pestis # 1 283 1 283 283 461 94.0 1e-130 MAQSPSIKREKWIRLSLTWLVVILVSVVIIYPLVWTVGASLNAGNSLLSTSIIPENLSFQ HYADLFNGNVNYLTWYWNSMKISFLTMVLTLISVSFTAYAFSRFRFKGRQNGLMLFLLLQ MIPQFSALIAIFVLSQLLGLINSHLALVLIYVGGMIPMNTWLMKGYLDAIPKDLDESARM DGASSFRIFIEIIMPLSRPILAVVALFSFTGPLGDFILSSTILRTPDKYTLPIGLYNLVA QKMGASYTTYAAGAVLIAVPVAILYLALQKYFVSGLTSGSTKG >gi|289776635|gb|GG745509.1| GENE 227 230528 - 231730 1566 400 aa, chain + ## HITS:1 COG:YPO0853 KEGG:ns NR:ns ## COG: YPO0853 COG3867 # Protein_GI_number: 16121161 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinogalactan endo-1,4-beta-galactosidase # Organism: Yersinia pestis # 1 400 1 400 400 654 77.0 0 MKRFTPAWLAVCLACSFSTSSLAADALETRAFQGMPADFIKGADISTLLDAEKHGATFYD QNNQRKDPIAILKENGVNYVRLRLWVDPQSASGEGYGGGNNDLATTLTLAKRAKAQGMKL LLDFHYSDFWTDPGKQFKPKAWEKMDYPQLKTAIHDYTRDTIARFKQAGVLPDMVQIGNE INGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLHHGEQVKIMLHLAEGTKNDTFR WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANC DNAENSFQAKEEKDGGYPATVQGQYHYIHDLMQAVIDVPDQRGKGIFYWEPTWIAVPGNT WATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSIKVFN >gi|289776635|gb|GG745509.1| GENE 228 231761 - 233818 2256 685 aa, chain + ## HITS:1 COG:YPO0852 KEGG:ns NR:ns ## COG: YPO0852 COG1874 # Protein_GI_number: 16121160 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Yersinia pestis # 1 684 1 684 686 1114 75.0 0 MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPR EGVFNFAWLDTILDKLYAAGIHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHN HCMSSPVYREKTLKINTLLAERYSSHPAVLGWHISNEYGGECHCDLCQNRFRDWLKARYQ TLENLNQAWWSTFWSHTYTDWSQIESPAPQGEVSIHGLNLDWHRFNTAQVTDFCRHEIAP LKAANASLPVTTNFMEYFYDYDYWQLAKALDFISWDSYPMWHRDKDETALACYTAMYHDM MRSLKGGKPFVLMESTPGATNWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGS VEKFHGAVVDHVGHIDTRIGREVSQLGEILSKLPEVRGCRTEAKVAIIFDQQNRWALDDA QGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYRLVIAPMLYMVRDSFAARAE AFVASGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAG NQCGLQGPYQVRHLCELIHTESAQTLATYRDDFYAGRPAVTVNGFGKGKAWHVASRNDLA FQRDFFAALSRELDLPRAIAADLPPGVVATARTDGESTFVFLQNYSAQSHTLTLPPGYRD CLTDAAAPDPLILSAWDCRILRRHA >gi|289776635|gb|GG745509.1| GENE 229 233883 - 234197 356 104 aa, chain + ## HITS:1 COG:YPO0851 KEGG:ns NR:ns ## COG: YPO0851 COG1264 # Protein_GI_number: 16121159 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIB components # Organism: Yersinia pestis # 1 101 1 101 103 134 64.0 5e-32 MVSLKSFLHYFSPARPAQPLSEVEKQQIEALIQAFGGEANITQVDACITRLRVTVRHLAA VDTDALQQQGALGVIILGQQVHAIFGKQSDALRQLLDEHFATRK >gi|289776635|gb|GG745509.1| GENE 230 234334 - 235605 1964 423 aa, chain - ## HITS:1 COG:YPO0850 KEGG:ns NR:ns ## COG: YPO0850 COG4580 # Protein_GI_number: 16121158 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 1 423 1 419 419 681 81.0 0 MNTTLRALSAALAAALIAPSAFAATAAIPSIDFHGYMRAGVGVSGDGSEAEWQKNKLGRL GNESDTYGELELGSEVYKKDDVSFYLDSMVSMVSDGSNDNETTLNDDAQFGLRQLNLQIK GLIPGDPNAVIWGGKRYYQRHDLHIIDTKYWNISGSGAGVENYTLGPGAVSLAWIRGDAN DVDYRVDGDSNVNINYIDLRYAGWKPWSGSWTEFGIDYAMPNTTKKQDSYGGLYDADNGV MLTGEISQDMLGGYNKTVLQYANKGLAQNMVSQGGGWYDMWNYVNDATGYRVINTGLIPI TEKFSINHVLTWGSADDITDYTDKTRMLSLVARGQYQFTDYVRLIGEVGGFYQKDSYNNG TSYKQAGEKYTIALGLADGPDFMSRPELRIFASYLNDSEDGKPFEDQTANNTWNFGVQVE AWW >gi|289776635|gb|GG745509.1| GENE 231 235876 - 236946 1220 356 aa, chain + ## HITS:1 COG:YPO0849 KEGG:ns NR:ns ## COG: YPO0849 COG1609 # Protein_GI_number: 16121157 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 355 1 356 357 552 83.0 1e-157 MKSKSATLEDVARHAGVSYQTVSRVLNKSANVSEATRRKVEKSIEALRYVPNRLAQQLVG KESQTVGLVTISLAWHAPSQVAAAVKRYANLEGYQVLISMIDESVNQSIQDSINELKSQR VDKVIINVPLETEQAQKIAADNDDIVCLFLDVDPYSSVFNVSFNPADGTRASVKYLYEMG HREIALLAGPDSSVSAKLRLKSWLETLEGYGLKPVTVLHGNWDAQSGYAGALQMLRETPN FSAVLVGNDQMALGVLSAFHQHQVAVPGEKSVIGYDDTYESSFFYPALSTVSLDLDLQGK EAVRRILASTSGAPHTSSILPARLVIRHSSGARTEQGKDLQAIAEQLRAIAHRLAP >gi|289776635|gb|GG745509.1| GENE 232 237063 - 237326 458 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206579281|ref|YP_002240045.1| 50S ribosomal protein L31 type B [Klebsiella pneumoniae 342] # 1 87 1 87 87 181 100 9e-44 MKAHIHPPYRTVVFHDTSVNEYFKVGSTIRTDRVIELDGETFPYVTIDVSSKSHPYYTGK QKTFASEGSAARFRQRFGGFIDAKRKA >gi|289776635|gb|GG745509.1| GENE 233 237323 - 237466 244 47 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152969009|ref|YP_001334118.1| 50S ribosomal protein L36 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 47 1 47 47 98 100 6e-19 MMQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR >gi|289776635|gb|GG745509.1| GENE 234 237463 - 238161 580 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein [Yersinia intermedia ATCC 29909] # 1 231 1 231 237 228 46 6e-58 MREYYQFGQELGAALPDWQPRPWPARQVLQGSRCRLEPLTLAHASDLFAAHQLAPDARSW TWLLREPESNLAEFSAWVEQVATLADPIHFAVVDQRQGKAVGSLALMRIDATHGVVEVGH VHFSPLLSRTAMATEAHWLLMQYVFDTLGYRRYEWKCNSLNMPSGRAARRLGFQYEGRFR QALVSKGHNRDTDWFSVIDGEWPQLDNAMRQWLAADNFTADGQQRRTLESFR >gi|289776635|gb|GG745509.1| GENE 235 238262 - 239719 933 485 aa, chain + ## HITS:1 COG:RSc3119 KEGG:ns NR:ns ## COG: RSc3119 COG1167 # Protein_GI_number: 17547838 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Ralstonia solanacearum # 25 477 25 482 488 327 45.0 2e-89 MNIPDDGFFTLVTQGIQHRSDETLQRALYHTLRHAILQGTLAANCRLPGSRVMAGRLQLS RNTVNAALEQLALEGYLMRSRQGTQVVPLAACREEPVKVPPVVLPERLQGLPAAMRRDSP ALLFTPGMPAVNYFPLPLWRRLMDNVLRDEGSALLGYGEAAGDPLLREAIARHLALSRGI RCDIRQIVITEGALEGVNLCASLLTDPGDSVWVEEPGYLGARSSFQRAGLRVSGMAVDDE GMGIANGVAEPPRLIFTSPSHQYPLGSVMSAARRLALVEYARLHGAWIVEDDYDSEFRHS GEPIPAMLGMVPDAPVVYLGTFSKTLFPALRIGFMVMPPALADAVQDVIGTLLRGGHRTE QRALARFIEKGHYARHLAAMRRLYRKRQQQLREALAQEITVPCEVLGGEGGLHLTVAMEG FDDQAIAQQARQFQLAPAALSHFYLDPQRGRSGLVLGYGNTSASRYPLALRTLNRLIVQH RRGSA >gi|289776635|gb|GG745509.1| GENE 236 239688 - 240158 550 156 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3942 NR:ns ## KEGG: Kvar_3942 # Name: not_defined # Def: sigma factor YlaC # Organism: K.variicola # Pathway: not_defined # 1 156 1 156 156 280 100.0 2e-74 MTEIQRLLTHTIDELNVQEKRDNRPRFSISFIRNHPGLFVAMYAAFLATLVVMLRSETLV DSVWLLVVLFILFNAFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPRQLIERILQS PDVDSEQKAQLKKMVATKGELSFYDVFTLTRAGAAQ >gi|289776635|gb|GG745509.1| GENE 237 240295 - 240861 520 188 aa, chain - ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 183 1 183 183 306 79.0 2e-83 MSEEKRKMIAGELYLSGDPTLRADRLRARQLLHRYNHSSPDAQEERQHILAELFGRAGDA YIEPSFRCDYGYNIFLGNAFYANFDCVMLDVCPIHIGDNCMLAPGVHIYTATHPLDAEAR NSGQEYGKPVTIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPAGAVVGGNPAQII KRLPLPNP >gi|289776635|gb|GG745509.1| GENE 238 241020 - 241238 205 72 aa, chain - ## HITS:1 COG:no KEGG:KPN_00441 NR:ns ## KEGG: KPN_00441 # Name: hha # Def: hemolysin expression-modulating protein # Organism: K.pneumoniae # Pathway: not_defined # 1 72 12 83 83 134 100.0 1e-30 MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY DKIPTSVWKFIR >gi|289776635|gb|GG745509.1| GENE 239 241265 - 241639 276 124 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3939 NR:ns ## KEGG: Kvar_3939 # Name: not_defined # Def: biofilm formation regulator YbaJ # Organism: K.variicola # Pathway: not_defined # 1 124 1 124 124 243 100.0 1e-63 MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFAL NYKIKYTEDNKLVAQVDEYLDDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPA SLSC >gi|289776635|gb|GG745509.1| GENE 240 242122 - 245268 3869 1048 aa, chain - ## HITS:1 COG:STM0475 KEGG:ns NR:ns ## COG: STM0475 COG0841 # Protein_GI_number: 16763855 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1047 1 1048 1049 1858 91.0 0 MPNFFIDRPIFAWVIAIIIMLAGGLSILKLPVAQYPTIAPPAISITAMYPGADAETVQNT VTQVIEQNMNGIDHLMYMSSNGDSTGTATITLTFESGTDPDIAQVQVQNKLALATPLLPQ EVQQQGISVEKASSSFLMVVGVINTNGTMNQDDISDYVAANMKDPISRTSGVGDVQLFGS QYAMRIWMDPNKLNNFQLTPVDVISALKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL TNTEEFGNILLKVNQDGSQVRLRDVAKIELGGESYDVVAKFNGQPASGLGIKLATGANAL DTANAIRAELAKMEPFFPSGMKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPIQKGSHGATTGFFGWFNRMFDKSTHHYTDSVGNILRSTGRY LVLYLIIVVGMAWLFVRLPSSFLPDEDQGVFLSMAQLPAGATQERTQKVLDEMTNYYLTK EKDNVESVFAVNGFGFAGRGQNTGIAFVSLKDWSQRPGEENKVEAITGRAMGYFSQIKDA MVFAFNLPAIVELGTATGFDFQLIDQGGLGHEKLTQARNQLFGMVAQHPDVLTGVRPNGL EDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYIMSEAKYRM LPEDIGKWYVRGSDGQMVPFSAFSTSRWEYGSPRLERYNGLPSLEILGQAAPGKSTGEAM SLMEELAGKLPSGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV MLVVPLGVVGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI EATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATILAIFF VPVFFVVVRRRFSKKSEDIEHSHQVEHH >gi|289776635|gb|GG745509.1| GENE 241 245291 - 246376 1309 361 aa, chain - ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 361 37 397 397 516 84.0 1e-146 MPEVGIVTLKSAPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFVEGSDIQAGVSLYQI DPATYQASYDSAKGDLAKAQAAANMDQLTVKRYQKLLGTKYISQQDYDTAVATAQQSNAA VVAAKAAVETARINLAYTKVTSPISGRIGKSAVTEGALVQNGQTTALATVQQLDPIYVDV TQSSNDFLRLKQELADGRLKQENGKAKVELVTNDGLKYPQAGTLEFSDVTVDQTTGSITL RAIFPNPDHTLLPGMFVRARLEEGVNPDALLVPQQGVTRTPRGDASVMVVGEGDKVEVRQ VTASQAIGDKWLVTDGLKTGDRVIVTGLQKIKPGVQVKAQEVASDDKQQAAGNAPSEQTK S >gi|289776635|gb|GG745509.1| GENE 242 246627 - 247277 642 216 aa, chain + ## HITS:1 COG:acrR KEGG:ns NR:ns ## COG: acrR COG1309 # Protein_GI_number: 16128448 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 213 1 213 215 339 79.0 2e-93 MARKTKQQARETRQLILDVALRLFSQQGVSSTSLATIAKAAGVTRGAIYWHFKNKSDLFN EIWELSDASISDLEIEYRAKFPNDPLSVIREILVYVLEATVTEERRRLMMEIIYHKCEFV GEMTVVQQAQRQLSLASYERIEQTLKECIAAKLLPANLLTRRAAVLMRSYLSGLMENWLF APDSFDLHAEARDYVAILLEMYQFCPTLRGPESLTA >gi|289776635|gb|GG745509.1| GENE 243 247407 - 250754 4261 1115 aa, chain + ## HITS:1 COG:aefA KEGG:ns NR:ns ## COG: aefA COG3264 # Protein_GI_number: 16128449 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli K12 # 10 1114 17 1120 1120 1733 84.0 0 MLHTISRQRATFIFFITLLCFIGLFSPVQGRAADLPDRAEVQSQLNTLNKQKELTPQDKL VQQDLTQTLETLDKIERIKSETAQLRQQVEQAPAKLRQAVDSLNNLSEVTDDAATRKTLS TLSLRQLESRVTQTLDDLQNAQNDLATYNSQLVSLQTQPERVQNAMYNASQQLQQVRNRL NGTSVGDETLRPTQQVLLQAQQALLNAQIEQQRKSLEGNTVLQDTLQKQRDYVTAWSNRL EHQLQLLQEAVNSKRLTLTEKTAQEAVTPDETTRIQANPLVKQELDINHQLSEKLIQATE NGNQLVQRNIQVKNWLDRALQSERDIKEQISVLRGSLLLSRILYQQQQTLPSADELQDMT NRIADLRLEQFEVNQQRDALFQSDAFVAKLEEGHSSEVNDEVHAALLEVIDMRRELLDQF NKQLGNQLMMAINLQINQQQLMSVSSSLKEILTQQIFWVNSNKPMDWEWIKAFPEALKGQ FKAMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIRWRLQWLKDYQAKLASQVGQLRNDTQ LHTPKAILIDLIRALPVVLVILAIGLILLTMQLNISGLLWAYSKKLAMFWLVFGLCWKVL EKNGVAVSHFNMPAQLTSHWRRQIVRVSLALLPLNFWSVISELSPLNLMDDVLGQFVIFF NLLLIAVLVWPMCRESWRDKESHSLRLLTITVLSIVPVALMVLTATGYFYTTLRLAGRWI ETVYLVMIWNLLYQTVLRGLSVAARRIAWRRALARRQHLVKEGAEGAEPQEEPTIALEQV NQQTLRITMLVMIALFAVMFWAIWSDLITVFAYLDSITLWHYNGTEAGASVVRSVTMGSL LFAIVASMVAWALIRNLPGLLEVLVLSRLNMRQGTSYAITTILNYAIIAIGAMTVFGSLG VSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGTFSGTVSKIRI RATTITDFDRKEVIIPNKAFVTERLINWSLSDTVTRVVIRLGVAYGSDLDKVKEVLLKAA HDHPKVMQEPAPAVFFTTFGASTLDHELRLYVRELRDRSYTVDELNRAIDRLCRENDINI AFNQLEVHLRNEKGDEVTEVKRDGKGDDLAPTTAS >gi|289776635|gb|GG745509.1| GENE 244 250790 - 251689 1045 299 aa, chain - ## HITS:1 COG:STM0479 KEGG:ns NR:ns ## COG: STM0479 COG5464 # Protein_GI_number: 16763859 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 298 1 310 311 383 64.0 1e-106 MEKVSQTPHDAVFRQMLMHQAVAKDFLQLYLPAPFLAICELDSLQLVSGSFVEEDLRASY SDILYSLRTHHGPGYVYALIEHQSTPDKLMAFRLLRYALAAMQRHLDAGHDTLPLVVPIL FYHGKVSPWPWARNWQQLFADPALAKALYSNDFPLVDLTVMPDNQIARHRRMAMLELLQK HIRHRDLAELQVPLIALMTQGYLTEAQLNTLLRYMLQAGTTEHPGALIRTLAAQSPRHKE LMMTIAEWLEEKGRKQGQQEGEQEATRSIAARMLARGLERQTVQELTGLSDEELAALAP >gi|289776635|gb|GG745509.1| GENE 245 251757 - 251930 192 57 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3933 NR:ns ## KEGG: Kvar_3933 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 57 1 57 57 93 100.0 3e-18 MSLENASDEVKLAVDLIMLLESHQIPAQTVLGALEIVRRDYANKLKNAESGSQNPEK >gi|289776635|gb|GG745509.1| GENE 246 251943 - 252446 614 167 aa, chain - ## HITS:1 COG:STM0481 KEGG:ns NR:ns ## COG: STM0481 COG3923 # Protein_GI_number: 16763861 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Salmonella typhimurium LT2 # 2 167 6 171 171 159 66.0 2e-39 MLNDQLSELAALVAPLAEHATLSPRFDRQLFHTRSTLMQDYLAEARQNFSQLSQAVERQQ LPQVVWIAERLAAQIAALRRETATWSLRSWDHASPTLSRWQRRRLQHQEYERRLLAMRDQ RQRQLAQATSLDEQQRLGKEVEAYSGRLARCRQALDKIENVLARLTR >gi|289776635|gb|GG745509.1| GENE 247 252540 - 252917 443 125 aa, chain + ## HITS:1 COG:ECs0521 KEGG:ns NR:ns ## COG: ECs0521 COG2832 # Protein_GI_number: 15829775 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 164 77.0 4e-41 MPPVILTIIGWLAVALGTLGIFLPLLPTTPFILLAAWCFARSSPRFHQWLLYRSWFGGYL RHWQQYRAMPRGAKPRAIAMIVVTFAISLWLVKLTWVRIMLLVILACLLIFMWRIPVVDA KQQKH >gi|289776635|gb|GG745509.1| GENE 248 253068 - 253619 835 183 aa, chain + ## HITS:1 COG:STM0483 KEGG:ns NR:ns ## COG: STM0483 COG0503 # Protein_GI_number: 16763863 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 334 92.0 6e-92 MTATAQQLEYLKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKV VGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGD KVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRLEKLGIHCYSLVPF PGH >gi|289776635|gb|GG745509.1| GENE 249 253712 - 254881 1320 389 aa, chain + ## HITS:1 COG:STM0484 KEGG:ns NR:ns ## COG: STM0484 COG2812 # Protein_GI_number: 16763864 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Salmonella typhimurium LT2 # 1 389 1 406 642 654 85.0 0 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRHQLEHILGEEQIAFEPRALQLLSRAADGSLRDALSLTDQAIASGEGQLTAASVSTM LGTLDDDQALSLIEALVAADGERVMAGVNDAAARGVEWEALLVEMQSLLHRIAMVQLSPS ALGADMATVEVRMRELARTVPPGDVQLYYQTLLMGRKELPYAPDRRMGVEMTLLRALAFH PRKPLPEPEVQPAQTAAPAPRQPVAPLAS >gi|289776635|gb|GG745509.1| GENE 250 255291 - 255989 727 232 aa, chain + ## HITS:1 COG:STM0484 KEGG:ns NR:ns ## COG: STM0484 COG2812 # Protein_GI_number: 16763864 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Salmonella typhimurium LT2 # 1 232 411 642 642 315 81.0 6e-86 MLAARSHLQRSQGATTPKKSEPAAASRARPVNNAALERLSSITERVQARPAAAALEQAPA KKEAYRWKATTVVEEAKVEVATPKALKKALEHEKTPELAAKLAEEAVERDSWAAEVSRLA VPKLVEQVALNAWKEQEGSRVCLHLRPSQRHLNSTGAQQKLAEALGVLYGTPVELTIVED DNPAMRTPLEWRQAIYEEKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI >gi|289776635|gb|GG745509.1| GENE 251 256047 - 256379 229 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 1 110 1 114 114 92 42 3e-17 MFGGKGGLGNLMKQAQQMQDKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDP SLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSAGMQLPPGFKMPF >gi|289776635|gb|GG745509.1| GENE 252 256379 - 256984 679 201 aa, chain + ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 382 96.0 1e-106 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC RTFTEQEVCNICSNPRRQENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGP DDIGLDRLEQRLEAESITEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGE LEMVDGTTLSHSLAGRHKITF >gi|289776635|gb|GG745509.1| GENE 253 257097 - 258971 2994 624 aa, chain + ## HITS:1 COG:STM0487 KEGG:ns NR:ns ## COG: STM0487 COG0326 # Protein_GI_number: 16763867 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Salmonella typhimurium LT2 # 1 624 9 632 632 1123 93.0 0 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPDLYEGD GELRVRVSFDKDNRTLTIADNGIGMNREEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRAAGDKPENGVFWESAGEGEYTVADITKADRGTEITLHL REGEDDFLNDWRVRSIISKYSDHIALPVEIEKQEEKDGETVISWEKINKAQALWTRSKSE VNDDEYKEFYKHIAHDYSDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLY VQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSSVTRNLRTALTKRALQML DKLAKDDAEKYQTFWKQFGLVLKEGPAEDPSNQEAIAKLLRFATTHTDSSAQTVSLEEYV SRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAF QSVAKADESLDKLADEVDESTKEAEKALEPFVERVKNLLGDRVKEVRLTHRLTDTPAIVT TDADEMSTQMAKLFAAAGQAAPEVKYIFELNPAHQLVKRAADTQDDAQFGEWVELLLDQA LLAERGTLEDPNQFIRRMNQLLAS >gi|289776635|gb|GG745509.1| GENE 254 259194 - 259838 942 214 aa, chain + ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 390 96.0 1e-108 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT DELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGITVDYVLEFDVPDELIVDRI VGRRVHAASGRVYHIKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIG YYTKEAQAGNTKYAKVDGTKAVADVRAELEKILG >gi|289776635|gb|GG745509.1| GENE 255 259967 - 260929 1195 320 aa, chain + ## HITS:1 COG:STM0489 KEGG:ns NR:ns ## COG: STM0489 COG0276 # Protein_GI_number: 16763869 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Salmonella typhimurium LT2 # 1 320 1 320 320 556 85.0 1e-158 MHQTKTGILLANLGTPDAPTPGAVKRYLRQFLSDKRVVDTSRLLWWPLLRGVILPIRSPR VAKLYQSVWMEEGSPLMVYSRRQQQALAARLPDTPVALGMSYGSPSLASAVDDLLAQGVG HIVVLPLYPQYSCSTVAAVWDELARILAKKRAIPGISFIRDYADHPDYIHALAASVRASF AVHGEPDLLLLSYHGIPQRYANQGDDYPQRCRDTTRELVSALGLPPERVMMTFQSRFGRE PWLTPYTDETLKMLGEQGTKHIQVLCPGFAADCLETLEEIAVQNREVFLEAGGEQYEYIP ALNADVAHIEMMVNLTAPYR >gi|289776635|gb|GG745509.1| GENE 256 260993 - 262297 1820 434 aa, chain + ## HITS:1 COG:STM0491 KEGG:ns NR:ns ## COG: STM0491 COG0524 # Protein_GI_number: 16763871 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 837 90.0 0 MKFPGKRKSKHYFPVNARDPLLQQIQPENESSVSWVVGIDQTLVDIEAKVDEAFIVRYGL SAGHSLVIEDDVAEALYQELVRNNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNI DIGGYAYRYLCNTSSRTDLNYLQGVDGAIGRCFTLISDSGERTFAISPGHMNKLRPESIP EAVIAGASALVLTSYLVRCKPGEPMPDATMKAIEYAKKHDVPVVLTLGTKYVIADNPAWW QQFLQEHVSILAMNEEEGEALTGFADPLSAADKALDWVDLVLCTAGPAGLYMAGFTEEEA KRKTQHPLLPGAIPEFNQFEFSRAMRHQDCVNPLRIYSHIAPYMGGPEKIMNTNGAGDGA LAALLHDITANNYHRNNVPNSSKHKCKWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGL PEREDSLEEAYWDR >gi|289776635|gb|GG745509.1| GENE 257 262333 - 264009 516 558 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 525 5 525 618 203 25 2e-50 MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL AELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQIAVATLLGMALSAALGWSLMTGIVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAIAGMTEKGDV GFASLALDLGITIGKVVAFIAIMMLVGRRLVPWIMSRSAATGSRELFTLSVLALALGIAF GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMVLVQ QPLAVLATLAIIIFGKSAAAFFLVRMFGHSPRTALTIAASLAQIGEFAFILAGLGMALNL LPQAGQNLVLAGAIISIMLNPVLFTLLEKYLDKTETLDEQTLEEVLEDEKQVPVDICNHA LLVGFGRVGSLLGEKLMAQGIPLVVVETSRTRVDELRERGISAVLGNAANEEIMELAHLD CARWLLLTIPNGYEAGEIVASAREKCPNIEIIARAHYDDEVDYIIDRGANQVVMGEREIA RAMLQLLETPPAGEVVTG >gi|289776635|gb|GG745509.1| GENE 258 264235 - 265455 1515 406 aa, chain - ## HITS:1 COG:ECs0532 KEGG:ns NR:ns ## COG: ECs0532 COG0477 # Protein_GI_number: 15829786 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 405 1 405 406 616 89.0 1e-176 MAINQTAQPLSGPAAPPQKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQAEFSLTFV QIGMITLTFQLTSSLFQPVIGYITDKRSMPWSLPVGMCFTLCGLILLALAGSFGMVLLAA ALVGTGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNFGSSLGPLLAAVIIAPYGKGNV AWFVLAALLAIVVLSQISRWYAAQHRMNKGKPKPLIVNPLPRNKVILAVGILLMLIFSKY FYMASISSYYTFYLMHKFGLSVQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSI LGVAPFTLVLPYASLEWTGILTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAF GMGGLGAAVLGLLADHTSIDLVYKICAFLPLLGFLTIFLPDNRQKA >gi|289776635|gb|GG745509.1| GENE 259 265725 - 267377 2303 550 aa, chain + ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 999 86.0 0 MQYFKHRVALALFAALSLGSLSAQAYEQDKTYKITILHTNDHHGHFWRNDYGEYGLAAQK TLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYDAMAVGNHEFD NPLSVLRQQEKWAKFPFLSANIYQKSTSERLFKPWALFKRGGLKIAVIGLTTDDTAKIGN PEYFTDIEFRKPAEEAKLVIQELQQNEKPDVILATTHMGHYDNGNHGSNAPGDVEMARSL PAGSLAMIVGGHSQDPVCMASENKKQVDYVPGTPCAPDRQNGIWIVQAHEWGKYVGRADF EFRNGEMKLVHYQLIPVNLKKKVTYDNGQSERVLYTPQIAENPQMMSLLTPFQNKGKAQL QVKIGSVNGHLEGDRSKVRFVQTNMGHLLLAAQMARSNADFAVMSGGGIRDSIEAGDITY KDVMKVQPFGNVLTYVDMSGKEVVDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKI KGEPVDPAKTYRMATLSFNATGGDGYPNIADKPGYVNTGFIDAEVLKEYIEKNSPLDAAA YEPKGEVSWQ >gi|289776635|gb|GG745509.1| GENE 260 267483 - 267962 692 159 aa, chain - ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 159 1 159 159 274 91.0 4e-74 MTPAVKLLEKNKIPFQIHSYDHDPNETNFGDEVVRKLGLNADQVYKTLLVAVNGDMKHLA VAVTPVAGQLDLKKVAKALGAKKVDMADPMVAQRITGYLVGGISPLGQKKRLPTVIDAPA QEFATIYISGGKRGLDIELAASDLAQLLDAKFADIARRD >gi|289776635|gb|GG745509.1| GENE 261 268164 - 268958 986 264 aa, chain - ## HITS:1 COG:STM0496 KEGG:ns NR:ns ## COG: STM0496 COG3735 # Protein_GI_number: 16763876 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 263 1 263 264 381 76.0 1e-106 MGLLNRIKMLWRAAVGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQ ADALIVEADISGNETPFSNLPSYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQV AMVLQATQAQKLGLRPDYGIDYQLLMAARESNITVMELEGADSQIALLRDLPDGGMALLE DTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALP PGRYVVAVGALHLYGEGNLPDMLT >gi|289776635|gb|GG745509.1| GENE 262 269089 - 271590 3169 833 aa, chain - ## HITS:1 COG:STM0498 KEGG:ns NR:ns ## COG: STM0498 COG2217 # Protein_GI_number: 16763878 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 832 1 832 833 1349 88.0 0 MSNTIDLTLDGLSCGHCVKRVKESLEQRPDVEQAEVTLTEAHVTGSASAQALIDTVKQAG YGAELSHPKAKPLAESSIPSEALTAATPELPAAHDEDDSQQLLINGMSCASCVSRVQNAL AAVPGVSQARVNLAERTALVMGSASAAELVQAVEKAGYGAEAIEDDLQRRERQQETAIAT MKRFRWQAIVALLVGVPVMVWGMIGDNMMVSDDNRSLWLVIGLITLAVMVFAGGHFYRSA WKSLKNGTATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHM LEARARQRSSKALEKLLDLTPPSARVVTPEGEKDLPLAEVQAGMTLRLTTGDRVPVDGVI SQGEAWFDEAMLTGEPVPQQKGDGDAIHAGTVVQDGSVLFTASAVGSQTTLARIIRMVRQ AQSSKPEIGQLADKISAVFVPAVVAIALISAAIWYVFGPAPQIVYTLVIATTVLIIACPC ALGLATPMSIISGVGRAAEYGVLVRDADALQRASELDTLVFDKTGTLTEGKPQVVAVKTF AGVDEHTALRLAAALEQGSSHPLARAILDKAADSSLPEVSGFRTLRGLGVSGEAEGHRLL LGNQALLNEQHIATGDIESEMTAQASRGATPVLLAVDGQAAALFAIRDPLREDSVDALAR LHRQGYRLVMLTGDNPTTAKAIAKEAGIDEVIAGVLPDGKADAIKRLQSQGHKVAMVGDG INDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLHGVADALAISKATLRNMKQNLLGA FVYNSLGIPIAAGILWPLTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE >gi|289776635|gb|GG745509.1| GENE 263 271697 - 272107 504 136 aa, chain + ## HITS:1 COG:STM0499 KEGG:ns NR:ns ## COG: STM0499 COG0789 # Protein_GI_number: 16763879 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 135 1 135 138 236 89.0 9e-63 MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRTYSQQHLDELTLLRQARQVGFNL EECRELVALFNDPSRHSADVKKRTLEKVADIENHIRELQNMRAHLLALAESCPGDDSAEC PIIDNLSGCCHRKAQA >gi|289776635|gb|GG745509.1| GENE 264 272104 - 272562 602 152 aa, chain - ## HITS:1 COG:ZybbJ KEGG:ns NR:ns ## COG: ZybbJ COG1585 # Protein_GI_number: 15800225 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli O157:H7 EDL933 # 1 151 1 151 152 187 72.0 4e-48 MIDMIFAHPHLFWLSLGGLLLAAEMLGGSGYLLWSGVAGVVTGALTWLLPLSWEWQGTLF AVLTLLAAWLWSKWLRKRVKTQRPADAQLNQRGQQLVGRRLTLDAPLVNGRGHVRVGDSS WPVIADEDLAAGSKVEVIAVEGITLRIRPAVR >gi|289776635|gb|GG745509.1| GENE 265 272559 - 273476 1378 305 aa, chain - ## HITS:1 COG:STM0501 KEGG:ns NR:ns ## COG: STM0501 COG0330 # Protein_GI_number: 16763881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Salmonella typhimurium LT2 # 1 305 1 305 305 506 91.0 1e-143 MLIFIPILIFVALVIVAAAVKIVPQGYQWTVERFGRFTQTLQPGLSLVVPFMDRIGRKVN MMEQVLDIPSQEVISRDNANVTIDAVCFIQVIDAPKAAYEVSNLEQAIVNLTMTNIRTVL GSMELDEMLSQRDSINTRLLHIVDDATNPWGVKITRVEIRDVRPPAELIASMNAQMKAER TKRAYILEAEGVRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATQMVS SAIASGDIQAINYFVAQKYTDALQQIGAANNSKVVLMPLDASSLMGSIAGISELIKEGAG DRKKS >gi|289776635|gb|GG745509.1| GENE 266 273617 - 274294 244 225 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 16 220 31 243 329 98 29 6e-19 MKENNALLRLEGVGFKTDDAVILHNITLQLRPGEFKLITGPSGCGKSTLLKIIASLLSPT SGRLFFDDVDIATLSPETYRQQVSYCAQTPALFGDSVYDNLVFPWQIRNKQPDPQALVAD LQRFGLGENMLEKSINELSGGEKQRVSLIRNLQFLPRVLLLDEITSALDESNKQNVNDII HGYATEKQVAVLWVTHDRNEISHADEVITLQPAGGNLQEVQHERA >gi|289776635|gb|GG745509.1| GENE 267 274281 - 275063 1018 260 aa, chain + ## HITS:1 COG:STM0503 KEGG:ns NR:ns ## COG: STM0503 COG0390 # Protein_GI_number: 16763883 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 258 1 258 259 402 86.0 1e-112 MNGHNITNESLALSMVLVLIAILVSYREKLALEKDIIWSICRAIVQLIIVGYVLKYIFNV NHAVLTLLMVLFICFNAAWNAKKRSKYIDKAFVSSFIAITTGAGLTLAVLVFSGSIAFVP MQVIPIAGMVAGNAMVAVGLCYNNMGQRFSSEQQQIQEKLSLGATPKMAAARLIRESIRA SLIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIAGYLT YRKFFNARHQLVVTQLKKHP >gi|289776635|gb|GG745509.1| GENE 268 275160 - 276014 1312 284 aa, chain - ## HITS:1 COG:ybbN KEGG:ns NR:ns ## COG: ybbN COG3118 # Protein_GI_number: 16128476 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Escherichia coli K12 # 1 284 13 296 296 404 83.0 1e-112 MSEQNIVNISEANLQQTLQQSMNVPVLFYFWSARSQHCEQLTPVLERLAAQYNGQFTLAK VDCDAEQMLASQFGLRAIPTVYLFQNGQPVDGFEGPQPEEAIRALLDKVLPREEELKAQQ ALALMQEEKYAEALPLLKEAWQLSNQDSQIGLLLAETLIALHRSDEAESVLKTIPLQDQD THYQGLVAQIELLKQAADTPEIQQLQQQVEQNPDDAQLASQLALQLHQVGRNEEALALLF SHLQKDLGAGDGQARKMLQEILAALGTGDALAAKYRRQLYSLLY >gi|289776635|gb|GG745509.1| GENE 269 276073 - 276843 230 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 247 3 242 259 93 30 2e-17 MQKTVLVTGCSSGIGLESALDLTRQGFRVLAACRKAEDVARMQGLGLTGILLDLDDPQSV ERAAAKVIALTDNRLYGLFNNAGYGVYGPLNTISRQQMEQQFSANFFGAHQLTMLLLPAM TPHGEGRIVMTSSVMGLIASPGRGAYAASKYALEAWSDALRMELRHSGIQVSLIEPGPIR TRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVEKVRHAFTSDKPKLRYPVTLVTHAVAL LKRLLPARAMDKIIHG >gi|289776635|gb|GG745509.1| GENE 270 276872 - 277528 731 218 aa, chain - ## HITS:1 COG:tesA KEGG:ns NR:ns ## COG: tesA COG2755 # Protein_GI_number: 16128478 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Escherichia coli K12 # 11 218 1 208 208 370 88.0 1e-103 MLSLTDGLLKMMNFKYVFRWHVPFLFLFLFTCRAMAADTLLILGDSLSAGYRMAANAAWP ALLNEKWQAKTPVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFPPQQT EQTLRTIIKDIKAANAEPLLMQIHLPANYGRRYNEAFGAIYPALAKEFDIPLLPFFMEEV YLKPQWMQDDGIHPNRDAQPFIADWMANRLAPLVNHDS >gi|289776635|gb|GG745509.1| GENE 271 277466 - 278152 894 228 aa, chain + ## HITS:1 COG:ECs0557 KEGG:ns NR:ns ## COG: ECs0557 COG4181 # Protein_GI_number: 15829812 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 363 87.0 1e-100 MPAENILEVHHLKKSVGQGEHQLSILTGVELVVKPRQTIALIGESGSGKSTLLAILAGLD DGSSGEVSMLGKPLHRMDEEARAALRAQHVGFVFQSFMLIPTLNALENVELPALLRGASD SESQGDARALLEQLGLGKRLHHLPAQLSGGEQQRVALARAFNGRPALLFADEPTGNLDRQ TGDKIADLLFSLNREHGTTLILVTHDPLLAARCDRRLRLVDGQLREEA >gi|289776635|gb|GG745509.1| GENE 272 278149 - 280563 2857 804 aa, chain + ## HITS:1 COG:STM0508 KEGG:ns NR:ns ## COG: STM0508 COG3127 # Protein_GI_number: 16763888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Salmonella typhimurium LT2 # 1 803 1 803 804 1178 82.0 0 MIARWFWREWRSPSLLIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLRSS REVPAEWIAQARKSGLTVGEQLSFATMTFAGDTPQLADVKAVDDRYPLYGTLETQPPGLK PQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDAGFNPFQMAPRLMMNMAD VAKTGAVQPGSRVAWRYKFAGNAQQLADYEQWLLPKLGAEHRWTGLEQDDSALGKSLERS QQFLLLSALLTLLLAVAAIAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLLLLT LSVISGGVVGLALERLLLLMLKPVLPAALPAASGWPWLWAIGATGVISLLVGLRPYRLLL ATLPLRVLRQDVVANVWPLKHYIPVVCAVVVGGLAWLMGGSPLLWSVLAGAVVLALLCGL VGWGLLWLLKRLTLKALPLRLAVNRLLRQPWSTLSQLAAFSLSFMLLALLLVLRGDLLDR WQQQLPPQSPNYFLINIAPEQIMPVKTFLAEHQTRAAEFYPIVRARLTQINGHSTDGNKD EALNRELNLTWSEQRPDHNPLVAGSWPPKPGEVSIEEGLAQRLGVKIGDTVTFTGDTQDF SAKVSSVRKVDWESLRPNFFFIFPSGALDGQPQSWLTSFRWDNGPAMLTQLNREFPTVSL LDIGAILRQVGQVLSQVSRALEVMVGLVTACGVLLLLAQVQVGMRQRHQELVVWRTLGAG KSLLRATLWAEFALLGLVSGLVAAIGAEVALAMLQTKVFDFPWTPDWRLWGMLPLTGAVL LSLCGGGLGLRLLKGKALFRQFSQ >gi|289776635|gb|GG745509.1| GENE 273 280745 - 281890 1583 381 aa, chain + ## HITS:1 COG:STM0509 KEGG:ns NR:ns ## COG: STM0509 COG3203 # Protein_GI_number: 16763889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 381 1 377 377 587 80.0 1e-167 MAHKIKALAVSIGATLVFASFASHAEITLLKQDPQAGDPLSRLNFTVGGSIRPQFNMMSG DGDKGSYKRNGFDGGTRFRFAADYYLFDDISWISYYELGVNIPALFDWDNHYAEGANNTT RRMLYTGLKSDTWGTLTYGQQNSIYYDVVGVKTDIWDYDMIGQAPGNGINGDYDGSYRSR NMLKYKKTVGDVDLYGSYLFEDSEYLPGNGLRYKRKGGGSIGADYHIMKDLTWGTAWNYT RAEMRDPSSADNKTYDQNIVGTALSWTPDNWTFSFGGGWYQNFLTTKKTDVHNYFAGDAW GIEYFAGYKFPINQYAVKSIQPYFMGDRLQYVNGRNYQRIDNGLGISFQLDYGFRVDYEH VFTSSTDNLGDMNLVRLRYDF >gi|289776635|gb|GG745509.1| GENE 274 281998 - 283074 1288 358 aa, chain - ## HITS:1 COG:STM0513 KEGG:ns NR:ns ## COG: STM0513 COG2603 # Protein_GI_number: 16763893 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Salmonella typhimurium LT2 # 6 356 9 361 364 527 73.0 1e-149 MTNGTDYRAILASDTPLIDVRAPVEFSQSAMPAAINLPLMNDEERAAVGTCYKRQGPEAA LALGHKLVDGDLRASRIQAWLEACARYPHGYLCCARGGQRSHIVQQWLKDAGVEYPLIVG GYKALRQAAIQATDELVQRPIVLIGGCTGNGKTQLVCSRPDGIDLEGLAHHRGSSFGRTL QDQHPQATFENHLAVSLLKKAEQQTRWVLEDEGHMIGANHLPECLRLRMAQSPLAVVEDP FDVRLERLREEYFDRMYRDFIAAYGEEKGWQAYGEYLHHGLFAIRRRLGLQRFAQLTERL DEALAQQQRTASTEAHFAWLVPLLEEYYDPMYRYQLGKKAGKILFRGSWQEVAAWLAK >gi|289776635|gb|GG745509.1| GENE 275 283186 - 284211 1621 341 aa, chain - ## HITS:1 COG:STM0533 KEGG:ns NR:ns ## COG: STM0533 COG0026 # Protein_GI_number: 16763913 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Salmonella typhimurium LT2 # 1 340 15 354 355 620 87.0 1e-177 MLRQAGEPLGIAVWPVGLEADPEAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVF PIIADRLTQKQLFDKLGLATAPWQLLADKSEWPAVFARLGELAIVKRRVGGYDGRGQWRL RADETAQLPEDNYGECIVEQGINFSGEVSLVGARAHDGSTVFYPLTRNLHQDGILRASVA FPQANARQQEQAESMLTAIMNELNYVGVMAMECFVTAEGLLINELAPRVHNSGHWTQNGA SISQFELHLRAITDLPLPPPVVNSPSVMINLIGTDLNYDWLKLPLVHLHWYDKEVRPGRK VGHLNLTDSDTDRLSATLEAIKPLLPPEYTSGLFWAQSQLS >gi|289776635|gb|GG745509.1| GENE 276 284250 - 284759 563 169 aa, chain - ## HITS:1 COG:ECs0585 KEGG:ns NR:ns ## COG: ECs0585 COG0041 # Protein_GI_number: 15829839 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 251 90.0 5e-67 MSSRNNSARIAIVMGSKSDWATMQFTAEILDALNVPYHVEVVSAHRTPDKLFSFAESAES HGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLA IGKAGAANAGLLAAQILAQHDAELHQRLSAWRQAQTDEVLDNPDPRGAA >gi|289776635|gb|GG745509.1| GENE 277 284856 - 285194 384 112 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3902 NR:ns ## KEGG: Kvar_3902 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 200 98.0 1e-50 MNRKKWSQPLMWGTIIAILNPLGVSYIALVGVAIGNTLTFVWCAMLAWAIYFYAIYLLCT RPHDSRLVQIYLLVMGALMLPWGLVLLITCIMNEIKANKPRSTSSLNETKDG >gi|289776635|gb|GG745509.1| GENE 278 285302 - 286024 832 240 aa, chain - ## HITS:1 COG:ybbF KEGG:ns NR:ns ## COG: ybbF COG2908 # Protein_GI_number: 16128508 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 1 240 240 415 82.0 1e-116 MATLFIADLHLQSEEPAITAGFLRFLQGEARQADALYILGDLFEAWIGDDDPNPLHQQIA SAIKAVVDAGVPCYFIHGNRDFLVGQRFARQSGMLLLTEEERLDLYGREVLIMHGDTLCT DDPGYLAFRAKVHTPWIQRLFLALPLFIRRRIAARMRADSKAANSSKSMDIMDVNPQAVV DVMERHHVQWLIHGHTHRPAVHELQANGQPAWRVVLGAWHSEGSMVKVTPDDVELIHFPF >gi|289776635|gb|GG745509.1| GENE 279 286028 - 286522 621 164 aa, chain - ## HITS:1 COG:ECs0587 KEGG:ns NR:ns ## COG: ECs0587 COG0652 # Protein_GI_number: 15829841 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 317 95.0 8e-87 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYDNTIFHRVINGFMIQGGGFEPGMK QKETKSPIQNEANNGLKNTRGTLAMARTQAPHSATAQFFINVADNDFLNFSGESLQGWGY CVFAEVVEGMDVVDKIKAVATGRSGMHQDVPKDDVIIKSVTVSE >gi|289776635|gb|GG745509.1| GENE 280 286698 - 288083 1854 461 aa, chain + ## HITS:1 COG:ECs0588 KEGG:ns NR:ns ## COG: ECs0588 COG0215 # Protein_GI_number: 15829842 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 890 95.0 0 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK LKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAE IIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMD FVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRS QLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEAMDDDFNTPEAYSVLF DMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQVDDAEVAEIESLI QQRLNARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK >gi|289776635|gb|GG745509.1| GENE 281 288129 - 288341 381 70 aa, chain - ## HITS:1 COG:STM0541 KEGG:ns NR:ns ## COG: STM0541 COG2501 # Protein_GI_number: 16763921 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 70 1 70 70 126 97.0 1e-29 MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIADGLVKVDGAVETRKRCKIVAGQTVS FEGQSVTVTA >gi|289776635|gb|GG745509.1| GENE 282 288343 - 289209 1140 288 aa, chain - ## HITS:1 COG:folD KEGG:ns NR:ns ## COG: folD COG0190 # Protein_GI_number: 16128513 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Escherichia coli K12 # 1 287 1 287 288 535 93.0 1e-152 MAAKIIDGKTIAQQVRSEVAEKVKARVAAGKRAPGLAVVLVGSNPASQIYVGSKRKACEE VGFVSRSYDLPETTSEAELLELIDTLNADKTIDGILVQLPLPAGIDNVKVLERIAPDKDV DGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELL LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGEWIKEGAIVVDVGINRLESGKV VGDVVYEDAAERASYITPVPGGVGPMTVATLIQNTLQACEEYHDVEEA >gi|289776635|gb|GG745509.1| GENE 283 290766 - 291167 350 133 aa, chain + ## HITS:1 COG:ECs2708 KEGG:ns NR:ns ## COG: ECs2708 COG2351 # Protein_GI_number: 15831962 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Escherichia coli O157:H7 # 3 133 6 137 137 139 53.0 9e-34 MKLVIASVISLLSFSALAAPEGTLSVHILNQQTGLPSPGVQIELDKQQGESWQHIATGKT DADGRIKSLYPQAENMEPGVYKVTFKTGDYFKSQNMNTFFPVVPVIFNVTKQNQKLHIPL LLSQYGYSTYRGS >gi|289776635|gb|GG745509.1| GENE 284 291246 - 291416 261 56 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3892 NR:ns ## KEGG: Kvar_3892 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 56 1 56 56 92 100.0 4e-18 MSGLINPHAAPEEAAYALLIELVRAQRVPQYEGEISGLLAMYDEAVKHFKEKETER >gi|289776635|gb|GG745509.1| GENE 285 291927 - 293231 1391 434 aa, chain + ## HITS:1 COG:STM0730 KEGG:ns NR:ns ## COG: STM0730 COG0372 # Protein_GI_number: 16764100 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Salmonella typhimurium LT2 # 1 424 1 423 427 545 58.0 1e-155 MSTTPLTLSFAGQQPTIDLPQVPGTRGPVGVDMHGLNQSGFCSYDPGFANTAGCQSAISW IDTENSVLLHRGYPVDQLARQCDFLEVAYIMLNGDAPDEASYQTFRETITRHTLVHEQIA RMCSGFRRDSHPMALMCALVGALAAFYHDVLDVENPQHRALAATRLLSKMPTIAAMSYKY TIEQPAAYPRNDLSYAGNFLQMLFAIPAEKYVLNPVIEQAMNQILVLHADHGQCASTTTV RAAGSSGANLFACVAAGLASLWGPMHGGANESSMRMLEEIESVDQVPAFLRQAKRDPQAF RRLGFGNSRYRHRDPRAGILRETSHRVLAEVGMSDRLLQVAMALEDVALTDPYFVDNGLS PSVDFYTAVILKAMNLPSSMFAVVTAVGRTVGWVAHWNEMHQAPLTIYRPRQIYVGEGYR DYVSRRGEQSVDPR >gi|289776635|gb|GG745509.1| GENE 286 293283 - 293588 312 101 aa, chain - ## HITS:1 COG:no KEGG:KPK_4103 NR:ns ## KEGG: KPK_4103 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 101 1 101 101 170 100.0 1e-41 MKSYLYAKNRLMLIILSWLSADEALPSRHDFQQTEAILSTLHIPYVLKSDLDQLKATLQP LLATPGPQACEVGAFLSALLALYTRLTEYTAVEHYLLSRHL >gi|289776635|gb|GG745509.1| GENE 287 293566 - 294228 511 220 aa, chain - ## HITS:1 COG:no KEGG:KPK_4102 NR:ns ## KEGG: KPK_4102 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 220 1 220 220 421 100.0 1e-116 MLICIADSEYFNIALKAYINEPNSKPLDIKEMLCYPFSGQSEMFYTFFATDAGARLSTIL IDYSSVSIEVLQVALSLKSFNPLIRIFIFAKSGYPLSELESSLAIVLGAEFITSFAGLST ALARAPRWTSPPADKLYIAIPDSYNLTRKETFLISLLMGGMPLCHVASTMQLTIKRVYYY RSRVLSKLAVKNNVELMNKVQGMVLRHYRQETGHEIVSLR >gi|289776635|gb|GG745509.1| GENE 288 294700 - 295260 416 186 aa, chain + ## HITS:1 COG:XF0083 KEGG:ns NR:ns ## COG: XF0083 COG3539 # Protein_GI_number: 15836688 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 8 185 9 183 184 92 39.0 3e-19 MKKYSRGMASFVVMMMLSPVAAQAADGKVTFNGEVIENTCTVVNKDKTVTLPTVQRSALS SAGETAGVVPFTIDLTSCTPGADVSVYFEKDQYVSTEGRLKNTLSDGTEAENVDVELLNT RFTPINLAETPAVAADGTIARPDVIPVAVAEQDGSASLPFYARYYATDAATAGKVATYVN FTVVYP >gi|289776635|gb|GG745509.1| GENE 289 295319 - 296014 677 231 aa, chain + ## HITS:1 COG:YPO2944 KEGG:ns NR:ns ## COG: YPO2944 COG3121 # Protein_GI_number: 16123127 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 4 226 14 242 259 176 41.0 4e-44 MRRMVLAWLLSCILPSADASMVIDGTRIIFPGDKKEIAVRATNMGETPSLTQVWVDDGRV QNQPEKDSAPFIVLPPIVRIEPGKGQSWRLVFNGSRLPQDRESLFWFNLLDIPPEPKNGT AINYLQLAIRSRIKLFYRPAGVAAEKMAPENALRWALAPTGNGLRVSNASSRYITIDSIT LNGQKQSAGMVAPFSSLEIALKGVALRTLPEKFSFTTINDYGAVVNHNYPQ >gi|289776635|gb|GG745509.1| GENE 290 296025 - 298460 2397 811 aa, chain + ## HITS:1 COG:XF0081 KEGG:ns NR:ns ## COG: XF0081 COG3188 # Protein_GI_number: 15836686 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Xylella fastidiosa 9a5c # 22 805 97 901 901 403 33.0 1e-112 MKLREIKFGLMLLLPWQEAWAAEAFSFNRAHLHGAAQVDLQKYQYGNPLHAGQYRSTLSV NGRDLAEETFVIQEHDGQLEPCISPSLFDALQLKDAQWPAATTCLRFSQINKAIGWEYDS GENVLRVNMPQALLQPHYRGAVNLKKVDSGVPAAVLRYQANSYQSIVDGDSSSHHYLGLD ASLRAFGWRLHHQSSYQAQEGNTHWDSIATWAERSVVNWASTLRLGQGWTEGTFFDSVSF IGGRLATDVRMLPGSRRGFAPSVSGVARTNARVTVTQNGALLYEATVPPGKFTFDDLYPT NAGGDLQVTIHEADGSQETFTVPYAALPGLVRAGAVYYDLSLGYLDEDGIAGRPGFGEAT VQYGFNDYVSGYTGANATTDYYSTLVGSAFNTYWGALAVDLSRSAAKGRERGWQEGYRWR VSASKSFASDTRMLVSMSHSNDGNYRSIRDAVREHDRHPNDWREMTRYSATLSQQAGSGS LSFNGIWSEDVRHHRWRSYQLGYANRYGQLNYYLYAQQSQDIHHRNNQVVGISFSLPFGQ AGSLTTRFNHDKNYGSQLQSSYTGSAGEKNAFSYGLTASYDMPRENPHEASVGGNGSLRT DYAYLNASASAGRHQQQYSLGASGALVAHQGGMTATPELGETFAIVEAPGAAGARVANRL GQPINRQGFTIIPYLDPFTDNWLDLDPQGLNDHVEIVSSSTTVVPDSGAAVKVKFVTRTG YPWFAHVTLPDGAAPPLGAEVFDDSGRAVGAVGQGGLLYARVPQADGSVSVVWGERSGQR CRLAYAIRGDAAQQVSRGTPHQVCRPGIKEK >gi|289776635|gb|GG745509.1| GENE 291 298462 - 299487 789 341 aa, chain + ## HITS:1 COG:STM0026 KEGG:ns NR:ns ## COG: STM0026 COG3539 # Protein_GI_number: 16763416 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 183 340 17 171 172 73 35.0 5e-13 MKKIIASGVPLLLAGGYCASLSAACQMVSGKTIEYSVNVSQASINLDVSNRPIGSLLYSY GGMIITNNERWEIACSGSEPGGFQSIGGSRVGPAGDGKPGDIYSIDRLPGIGYSFQMGEQ DGINFDPLFTAWPSAPVFSGQRAFQAENKKPTIYFWRIADNGGLPPPGEYCLNDYLGDIY LGGVQAMRFSVSGLCIQVKSPTCKITDDSKNINVFLGRHNKTAFTGLNSTTAPVPFNINL TNCENVGSVFMQFNATVDSAVAANEVIKIDDQPEGASGLGVQILSAGGALVPLNQVSQVW SGNKGSQTNYRLSYQARYIQTQPAVTAGEANASATFVVTYN >gi|289776635|gb|GG745509.1| GENE 292 299510 - 300376 887 288 aa, chain - ## HITS:1 COG:lin2361 KEGG:ns NR:ns ## COG: lin2361 COG0454 # Protein_GI_number: 16801424 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 1 288 1 291 291 179 36.0 6e-45 MNYQLVKQVRENSPLRKSFIDLAVKTFDLSFEEWYQQGYWTDAYIPYAFVERNKVIANAS ANIIDLRWQGEPRRYIQIGTVMTEPDHRNKGLAGQLIHHILQDWQQEADAFFLFANPTTV DFYPKFGFTRSEEHQYIMPVSPRAGDFRKLDMDSADDVALLRHYYEKSNPFSPLRVEHNF GLLMFYCSAFMKHFVYYSAKNEAVVIAMQNGPVLICFDLFCEEGKSLSTLVNELADDHVY QAILGFTPNEDRLGEYEKIEGEDILFVYDQKENLFKDRKLMFPLLAHA >gi|289776635|gb|GG745509.1| GENE 293 300887 - 301807 1083 306 aa, chain + ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 494 76.0 1e-139 MSNLPKFSRALLHPRYWLLWLGIGFLWLLVQLPYPVIYRLGTALGRLAMRVMKSRARIAR RNLELCFPEMSAADREALLVKNFESLGMGLMETGMAWFWPTHRVARWTETSGVNEVVELL EQKQGILLIGIHFLTLEMGARMYGMFTPGIGVYRPNDNPLIDWLQTWGRLRSNKTMLDRK NLKGMVRALKEGEILWYAPDHDYGPASSVFAPLFAVEQAATTTGTWMLAKMSGATIVPFV PRRKPNGMGYELISLTPERTPPLASAEVTAAWMNQIIEQCILMAPEQYMWLHRRFKTRPE GVPPRY >gi|289776635|gb|GG745509.1| GENE 294 301908 - 302180 387 90 aa, chain + ## HITS:1 COG:no KEGG:KPN_00497 NR:ns ## KEGG: KPN_00497 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 90 1 90 90 157 98.0 1e-37 MKKVIVALALSAVAFGASAAQLITKEEVKHFKLTKVGPISVGPSGGEFSSPSDLHDQLSK LADEKGGKYYVITAAREHGPNFEATAEVYK >gi|289776635|gb|GG745509.1| GENE 295 302474 - 304054 1465 526 aa, chain + ## HITS:1 COG:STM2557_1 KEGG:ns NR:ns ## COG: STM2557_1 COG3710 # Protein_GI_number: 16765877 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 1 194 1 182 183 201 54.0 3e-51 MLQPVVRVGEWLVTPSVNQISRKGRQLTLEPRLIDLLVFFARHPGEVLSRDELIENVWTR NVVTSHVVTQSISELRKSLKDGDDVSLEYIATVPKRGYKLTVPVIWCTEEGEELAPQVEA LTPSSSTAIPVPPAAGGPPEAPDSSADLTAPVTAPAAAPAVASAPSARKRLTTALVWGLF LLALGTCVALVALSSMESRPPVNKARLLLNPRDIDIHLVNGNSCANWSSQHSYAVGLASL ITTSLNTFSTFMVHDKTDYNINEPSSSGKTLTIEFVNQRHYRAQQCFMSVQLVDNADSST MLDKRYFVTNDNQLTIQNDLMNSLSDALTQPWPARMQAMLRQYQPSQSVALTYFYQSHQL LMKGDVDSLSKASSLLDDVIKRAPDFIYAYAEKTLVDVLRHSQQPLDDKQLAALYSEVER VGEMPGIKDMAIYYQIKAVDSLGKGKVDEANTAINSAIDLEMSWLNYVLLGKVYEMKGEN RLAADSYITAFNLRPGGDTLYWIENGVFQTSVNRVVPYLDNFLSSE >gi|289776635|gb|GG745509.1| GENE 296 304420 - 305754 1418 444 aa, chain + ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 439 1 439 443 734 92.0 0 MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWVISIIGAMSLAYVYARL ATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPILNNPVP AGIACIAIVWIFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAVVGWHWFDVATYQANWNT SSTTDSHAVIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTAMAGIVYIAATQ VIAGMYPASQMAASGAPFAISASTILGGWAAPMVSAFTAFACLTSLGSWMMLVGQAGVRA ANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMVLITLMNSAGGKASDLFGELTGIAVL LTMLPYFYSCVDLIRFEGINIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIIL MFYGRKMHQRQNNATDNNSPANAH >gi|289776635|gb|GG745509.1| GENE 297 305837 - 307984 3131 715 aa, chain + ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 715 1 715 715 1437 94.0 0 MNVIAIMNHMGVYFKEEPIRELHRALERLDFRIVYPNDRDDLLKLIENNSRLCGVIFDWD KYNLELCEEISKMNEYMPLYAFANTYSTLDVSLNDLRMQVRFFEYALGAAEDIANKIKQN TDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGSNTMKSDI SISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA GKRLIDGSIERSIKFRKEIKRLKGESDGWFFDVWQPEHIDGPECWPLRSDSAWHGFKNID NEHMYLDPIKVTLLTPGMKKDGTMDDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQDLAQNIHKLIEHH NLPDLMFRAFEVLPSMVMTPYAAFQKELHGQTEEVYLEEMVGRVNANMILPYPPGVPLVM PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEENNK >gi|289776635|gb|GG745509.1| GENE 298 308045 - 309520 2223 491 aa, chain + ## HITS:1 COG:STM2560 KEGG:ns NR:ns ## COG: STM2560 COG3104 # Protein_GI_number: 16765880 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 468 1 468 486 751 86.0 0 MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDSHAISLFSAYASLVYVT PILGGWLADRLLGNRTAVIAGALLMTLGHVVLGVESTSAWSLYVALAIIICGYGLFKSNI SCLLGELYAHDDPRRDGGFSLLYAAGNVGSIAAPIACGLAAQWYGWHIGFALAGIGMFIG LMIFLSGSRHFRHTRGVDKPALRAVKFVLPTWGWLLVMLCLAPVFFTLLLQNNWSGYLLA IVCLFAAQMVARIMIKAPEHRRALWQIVLLMLAGTLFWVLAQQGGSSISLFIDHFVNRRL LNWDVPTALFQSVNAVAVMAAGVVLAWLMRPEGSVRSVLRVWLKFAFGLLLMGGGFMLLA LNARHGAADGQASMGMMVAGLAMMGFAELFIDPVAMAQITRLNMPGVTGVLTGIYMLATG AVANWLAGVVAQQTTESQISDTAIAAYQHFFSQMGEWTLGCVAVMVVIAFAAACSVGKRR AAAGEITGGGA >gi|289776635|gb|GG745509.1| GENE 299 309852 - 311369 2246 505 aa, chain + ## HITS:1 COG:STM3040 KEGG:ns NR:ns ## COG: STM3040 COG1190 # Protein_GI_number: 16766341 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Salmonella typhimurium LT2 # 1 505 1 505 505 932 91.0 0 MSEQQAQGADEAIDLNNELKTRREKLAALREQGVAFPNDFRRDHTSDQLHAEFDAKDNDE LASLNVEVAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD IIAARGKLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANEES RHTFRIRSQILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQTVLGKTEVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESLGI QVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK >gi|289776635|gb|GG745509.1| GENE 300 311527 - 311958 392 143 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3876 NR:ns ## KEGG: Kvar_3876 # Name: not_defined # Def: Tol-Pal system TolA # Organism: K.variicola # Pathway: not_defined # 1 143 1 143 143 270 100.0 2e-71 MSKFGIALMTAAAISLLSGCQAAKEKHPTQEELIRQMQQRAAAPDTHTLPPGKATQDQLM RYAFTLREAVMVQLPNSARYQGKICSVRLSLNRSAKLTGLQQEGGDPAFCAVVTDAVLRT TFPPFASEGVYQIFNHPLLDFKP >gi|289776635|gb|GG745509.1| GENE 301 312003 - 312428 543 141 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3875 NR:ns ## KEGG: Kvar_3875 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 141 14 154 154 234 98.0 8e-61 MNKTWLFTTLTLALVAAAPAHAISAKYREQLERSGCTQMTDGTTCDIHKTKAENAAAAQQ ASSGFGPWVGTWYVYTEYGDKIDEITVTAKTVKTHGHLVEAAKASQGKLTFRVKSSAFTL NNAFNGSWTNGSQRGSLQKVQ >gi|289776635|gb|GG745509.1| GENE 302 313000 - 313920 1293 306 aa, chain + ## HITS:1 COG:mlr1006 KEGG:ns NR:ns ## COG: mlr1006 COG1082 # Protein_GI_number: 13471121 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mesorhizobium loti # 6 288 1 283 296 298 52.0 1e-80 MATEHLQWGVSPLCWTNDVLEDLGGDIPLDTCLREAREAGYQGIELGRKFPRQAETLGPL LAAADLRLASGWYSGLLAERSVEAELEAVREHAQLLRQLGARVMVYGECGQLPGETPLDE PISLSPPLSRVSLAAYCHKLNTFADLLLRDYGLQLAYHHHLMMLVEHDDELERFLSHTHD NVGLAFDTGHAFVAGVEIPRVLQKYGHRIRHLHLKDVRPQVLGRLYRENLSFNEAVRAGL FTIPGDGCIDYAPILDFVRRSDYRGWLIIEAEQDPAMAPPLATARRAYAWLAHHLSSPSP SEEHAA >gi|289776635|gb|GG745509.1| GENE 303 313917 - 315089 1531 390 aa, chain + ## HITS:1 COG:YPO2584 KEGG:ns NR:ns ## COG: YPO2584 COG0673 # Protein_GI_number: 16122797 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Yersinia pestis # 5 387 4 373 377 321 46.0 2e-87 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQSLAERHAAKLGAE KAYGDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQA ARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDPNLPWSWRCSK TLGGSGALGDLGAHTLSVAQFLLGGIREVTASAQTCLRQRPVPQRDAGYASRVAADAEWR EVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYR FNDDKHDRGFKTLYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGEGDCYP NFEFGLQNQRVLSAIEASMVSRRWVNVVKD >gi|289776635|gb|GG745509.1| GENE 304 315099 - 316130 1310 343 aa, chain + ## HITS:1 COG:lin0303 KEGG:ns NR:ns ## COG: lin0303 COG0673 # Protein_GI_number: 16799380 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 20 263 4 249 323 147 32.0 2e-35 MFPSHLPIPRRPAAQSIPSLRWGIIGPGWIAERFVHALKTYSRQQVVAVASRSQAKAERV AAEWGIPQAYGQVEEMLARPDIDAVYIATPHNHHFPDGMQALKAGKHVLIEKPFALNLGE GRELQAEAARQGKLALEAMWCDYAPKYDVIRQLLEDGALGDLHTLLADHGEYFTSDHRIF NADLAGGPMMDLGSYLTSFALMVGGMPQEIVARGSATAEGLNGQTSMLFSWQNGMQGLLN TTLFSNTPGGAVVAGRQATLTIDGQFYAPGGFTLAASQGGQALRWEEPRNRYDQLFWQAE HFAWCIGQGLRDSPLRPLSRVLQNLQVMDEVRRQVGAVFNEER >gi|289776635|gb|GG745509.1| GENE 305 316374 - 317381 1242 335 aa, chain - ## HITS:1 COG:mll4991 KEGG:ns NR:ns ## COG: mll4991 COG0673 # Protein_GI_number: 13474167 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Mesorhizobium loti # 5 332 4 330 331 215 38.0 9e-56 MICKRFALVGSGFIGQVHAASLARHEGSALTMVADAAPERAQALAARYGARAVTVSEAIH SDAIDAVLIASSTPSHAELLEAAARAGKAVYCEKPIDLSLARAREVVERVLPLNVPVTVG FNRRFDSSHQQLRRQLEQGLIGRVELVQMVCRASTMPPLDYLRNSGGQMRDQAIHFFDLL RFLTGDEVRTVAAMGAALALPDIAEFGDVDTSILMMQMRGGALAQLDNTRRTGHGYDERI TLLGAEGALESGSQSPAGPTLWRGNQRIEPGLWPDWFSRVQGSYYQHLDAFIRALNGETV ADLPGLLDGLQAQAIAEAAVQSLQHGQFVAVDDCR >gi|289776635|gb|GG745509.1| GENE 306 317483 - 318502 1134 339 aa, chain + ## HITS:1 COG:SMa2049 KEGG:ns NR:ns ## COG: SMa2049 COG1879 # Protein_GI_number: 16263573 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 9 320 36 349 360 162 34.0 1e-39 MKNISLAMLARQIGVGVATVDRVLNERGGVSPQTTRKVLQAAREAGLKRILPEEHRFPWQ VEVFLSSNDSFFFPQLAQDFAAVADSLGYRRLTLHRTFVPESQPTTLARRIVRSCQQRQG IIVFGNDHPAVHDALRRCREAGVPAITLATDLPGADRLCHVGINQLQAGRTAGLMLGRMT PRPGEVLMVSGRQDYSAHRLRIQGFREVLSQRFPHLQLSDVLAGEERREQITRLLEQALC RSRNIVGIYNTGLGNTQIAEALARHRREGDVCWITHERYNTTRQQLAKGSLALTLDQNTR QHAQLAIDLMLRHLESGYQPQTYADGKVDFILYSAENVD >gi|289776635|gb|GG745509.1| GENE 307 318933 - 319856 1383 307 aa, chain + ## HITS:1 COG:SMb20712 KEGG:ns NR:ns ## COG: SMb20712 COG1879 # Protein_GI_number: 16265167 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 3 305 1 309 309 254 46.0 2e-67 MNIKKTIVASLLACMLPAVVMAKDVSIGVSMALFDDNFLTILRTSMQKEMKKDGVKSQIE DAKGDVSQQLQQVQNFIGQGVDAIIVNPVDTNAVKPIMDQATKAGIPLVFVNRRPQAELT DKMAYVGSDSILAGRLQMEALAKAMNGKGNVAILLGDLANESTRDRTKGVEEVVAKYPNI KIVQKQTAKFTRNDAVDVVSNWMTSGEDIQAIASNNDEMAIGALQALGKNPNHILIAGVD GTPDALQMLKSGKMIATIFQDAKGQGEGAVDAAIKLANGEKVEKIIDVPYQLITKENMAE FTNRNQK >gi|289776635|gb|GG745509.1| GENE 308 319889 - 321373 194 494 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 271 482 40 248 329 79 25 4e-13 MNAFALEAEGISKFFPGVKALDNVSLRVRPGTVHALMGENGAGKSTLMKCLIGIYRPDKG SIRVKGEPVEFTDTMDALRSGISMIHQELNLVPHMTVAENIWLGREPMKYGFVDHGQLTR QTQALLDKLNIRLTADRLVGDLSIAAQQMVEIAKAVSWNADIVIMDEPTSALTEGEVAHL FTIIRDLRAQGKAIIYISHKMDEIFAITDEISVFRDGTWVGSKNTTEFTRQSLITQMVGR ELTQLFPKFNNTIGEEVLTVRNLTRHGVFHDVSFTVRRGEILGVAGLVGAGRSEVMESLF GMERFDSGEVLIDGAPVTIDSPSVAIEKGMALLTEDRKKSGLFLVLSVLENMSIVKMPEY IGKSGFVQHVKMAEDCMEQIRRLNIKTPTMDQIINNLSGGNQQKVLIARWLLAQPKILIL DEPTRGIDVGAKAEIYHLISELANRGVAVIMVSSELPEILGMSDRVMVMHEGRITGILEK DEADQETILSLASH >gi|289776635|gb|GG745509.1| GENE 309 321393 - 322415 1668 340 aa, chain + ## HITS:1 COG:SMb20714 KEGG:ns NR:ns ## COG: SMb20714 COG1172 # Protein_GI_number: 16265169 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Sinorhizobium meliloti # 1 339 1 338 341 315 58.0 6e-86 MKLTAAPASEGSSFFANLRHKMPKDTGIFVVMLVIALTFEIAGWYVRDQSFLLNTNRLVL IVLQVAIIGIIAVGVTQVIITTGIDLSSGSVIALAAVVAASLAQTSDSLSPMFPALVNLP AVIPICAGIGVGLLCGLTNGFLVTRTGIPPFIATLGMMVSARGLAQYYTQGNPISFLSDS FTAIGQGAMPVIIFFVIAAVFHIALKHTRYGKYVYAIGGNMTSAKVSGINVNKYLVIVYT IAGALSGLAGVVLAARVSSGQSSMGMSYELDAIAAAVIGGSSLMGGVGRITGTLIGAMIL GLIKSGFTFVGVDAYVQDIIKGIIIVAAVTIDMRRNRKKH >gi|289776635|gb|GG745509.1| GENE 310 322601 - 323242 491 213 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3866 NR:ns ## KEGG: Kvar_3866 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 213 1 213 213 368 99.0 1e-100 MNTPSVVKSSPLWRPASRGIIVTLIAGLAILALGRGVNLPAREVYREMQTRQLEEDAQWV AQRLERRMNTPAPQREAAWPLAAMRAELHTLARQRHYQLLLVNGDGHLLAASHALPASVL AQVQAQFPREMQPPLFGSHYQTIQPFAPHQRMLTRALNGEAGLTGWNLVVLAPDGGLPSL LMAYRWPVTIGLGMLFAGALLAVRQAARARRKR >gi|289776635|gb|GG745509.1| GENE 311 323258 - 324265 1276 335 aa, chain - ## HITS:1 COG:PM1847 KEGG:ns NR:ns ## COG: PM1847 COG1609 # Protein_GI_number: 15603712 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 317 7 324 339 274 42.0 2e-73 MMKTKRVTIKDIAELAGVSKATASLVLNGRGKELRVAQETRERVLAIAREQHYQPSIHAR SLRDNRSHTIGLVVPEITNYGFAVFSHELETLCREAGVQLLISCTDENPGQESVVVNNMI ARQVDGLIVASCMHSDADYLKLSEQLPVVLFDRSPSDSALPLVMTDSVTPTAELISRIAP QHADEFWFLGGQPRLSPSRDRLAGFTQGLAQAGVTLRPEWVINGNYHPSSGYEMFAALCA RLGRPPKALFTAACGLLEGVLRYMSQHHLLDSNIHLASFDDHYLYDSLSLRIDTVQQDNR QLAWHCYDLLSQLIDGQAPEPLQRYLPATLQFRHP >gi|289776635|gb|GG745509.1| GENE 312 324292 - 325692 1687 466 aa, chain - ## HITS:1 COG:BH1858 KEGG:ns NR:ns ## COG: BH1858 COG1621 # Protein_GI_number: 15614421 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus halodurans # 30 464 32 485 487 363 42.0 1e-100 MSLPSRLPAILQAVMQGQPQALADSHYPQWHLAPVSGLLNDPNGFCQVAGRYHLFYQWNP LACDHTYKCWGHWSSADLLHWRHEPIALMPDEEYDRNGCYSGSAVEFEGALTLCYTGNVK FPDGGRTAWQCLATENADGTFRKLGPVLPLPDGYTGHVRDPKVWQQDGRWYMVLGAQDLQ QHGKVLLFTASDLREWRLVGEIAGHGVNGLANGGYMWECPDLFPLADTHLLICCPQGLAR EAQRFLNTYPAVWMAGRFDAERGTFNHGPLHELDSGFEFYAPQTMLAEDGRRLLVGWMGV PDGEEMHQPTRAQGWIHQMTCVRELEWQAGTLYQRPLRELAALREEAQGWRGQTLPLAPM ELVFDIAPNSTLGLDFAGALQLTANRDGLRLSRRGLQTAEMHHRYWRGEARRLRIFIDRS SVEIFINDGEGVMSSRFFPGYPGQLIFSGATPVAFCRWLLRPCMVV >gi|289776635|gb|GG745509.1| GENE 313 325692 - 327062 1986 456 aa, chain - ## HITS:1 COG:RSp1285_2 KEGG:ns NR:ns ## COG: RSp1285_2 COG1263 # Protein_GI_number: 17549504 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Ralstonia solanacearum # 95 444 5 355 374 385 62.0 1e-107 MDFDQISRSLLPLLGGKENIASAAHCATRLRLVLVDDALADQQAIGKIDGVKGCFRNAGQ MQIIFGTGVVNKVYAAFIQAAGISESSKSEAADLAAKKLNPFQRIARLLSNIFVPIIPAI VASGLLMGLLGMVKTYGWVDPSNAIYIMLDMCSSAAFIILPILIGFTAAREFGGNPYLGA TLGGILTHPALTNAWGVAAGFHTMNFFGIEVAMIGYQGTVFPVLLAVWFMSMVEKRLRRV IPDALDLILTPFLTVIISGFIALLLIGPAGRALGDGISFILSTLISHAGWLAGLLFGGLY SVIVITGIHHSFHAIEAGLLGNPSIGVNFLLPIWAMANVAQGGACFAVWFKTKDAKIKAI TLPSAFSAMLGITEAAIFGINLRFVKPFIAALVGGAAGGAWVVSMHVYMTAVGLTAIPGM AIVQASSLLNYIIGMAIAFAVAFMLSLTLKYKTDAE >gi|289776635|gb|GG745509.1| GENE 314 327167 - 328684 2186 505 aa, chain - ## HITS:1 COG:STM4231 KEGG:ns NR:ns ## COG: STM4231 COG4580 # Protein_GI_number: 16767481 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Salmonella typhimurium LT2 # 96 505 27 452 452 84 26.0 6e-16 MYKKRKLAILIALLTGTAAAHGQTDLNSIEARLAALEKRLQDAETRASTAESRAASAEQK VQQLTQQQQQTQVTTQQVAKRTTQLEEKAERPGGFEFHGYARSGVIMNDSAASTKSGAYM TPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTTYNDWTASSSDL NVRQAFVELGNLPTFEGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKWN DSLRSNFSLYGRNFGDIADSSNSVQNYIVSMNNFAGPVQMMVSGMRAKDNDERQDTNGNL VKGDAANTGVHALLGLHNESFYGLRDGTSKTALLYGHGLGAEVKGIGSDGALRPGANTWR FASYGTTPLSDRWFIAPAVLAQSSKDRYVDGDSYQWATLNLRLIQEVTQNFALAWEGSYQ YMDLQPEGYNDRHAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYTSWMDWSKKLDNYAN DDALGSNGFKSGGEWSFGMQMETWF >gi|289776635|gb|GG745509.1| GENE 315 328851 - 329774 1148 307 aa, chain - ## HITS:1 COG:ECs3242 KEGG:ns NR:ns ## COG: ECs3242 COG0524 # Protein_GI_number: 15832496 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 371 62.0 1e-102 MNGKIWVLGDAVVDLLPDGEGRLLQCPGGAPANVAVGVARLGGDSGFIGRVGDDPFGRFM RHTLAQEQVDVNYMRLDAAQRTSTVVVDLDQHGERTFTFMVRPSADLFLQPEDLPPFAAG QWLHVCSIALSAEPSRSTAFAAMEAIKRAGGYVSFDPNIRSDLWQDPQDLRDCLDRALAL ADAIKLSEEELAFVSGSDDIVSGIARLNARFQPTLLLVTQGKAGVQAALRGQVSHFPARP VVAVDTTGAGDAFVAGLLAGLAAHGIPDNLAALAPDLTLAQTCGALATTAKGAMTALPYR DDLQRSL >gi|289776635|gb|GG745509.1| GENE 316 329887 - 330654 667 255 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3860 NR:ns ## KEGG: Kvar_3860 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 255 1 255 255 508 100.0 1e-143 MSQAEYFATPDLDFSFPTRLGIVQQVAVSPAAVAKGKGVRSAMNPSFGDIYDRYQNLTLT THLPAVIACSETLSLGKDQGFIPQPGYLYFLLQGQMTLAFGDEQNLVGIVIAHMPLGLLE HYCPSVALYYRCLGECQLAKITASDFERIFFHSSPGYMQELTTILAYMGIFALDAHYERG SQTSFQTIKSMLSRYLYRSEIDGGQHESLSAFIIKRTNLSRSYVYQVLAALREGGYITVK KGKLISIDRHIPEKF >gi|289776635|gb|GG745509.1| GENE 317 330789 - 331133 370 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3859 NR:ns ## KEGG: Kvar_3859 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 197 100.0 1e-49 MTLDYVALAILIAVALILFYGVIVIHDIPYEIAKERRHPHQDAIHYAGWVSLFTLHALWP LLWIWATLWREDRGWGMRHIADDQQALHQRLETVVQQLEQVQREVAALKAEEAN >gi|289776635|gb|GG745509.1| GENE 318 331133 - 332275 1629 380 aa, chain + ## HITS:1 COG:VCA0047 KEGG:ns NR:ns ## COG: VCA0047 COG1566 # Protein_GI_number: 15600818 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Vibrio cholerae # 1 380 1 376 376 435 59.0 1e-122 METLMLLTYAALCIVVFKVFRIPLNKWTVPTAVLGGIALIGAVIFGMNYNFPYTDVGNQV FRTVPIVSQVRGRVQSVPVKLNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSL NAALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSAAQ AKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLRPGTMST ALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGTVFRGEVADVLP AIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALPQGATLEAAVYSDHLKELS LIRKILIRMKSWENYLYLDH >gi|289776635|gb|GG745509.1| GENE 319 332316 - 333113 930 265 aa, chain - ## HITS:1 COG:YPO1312 KEGG:ns NR:ns ## COG: YPO1312 COG1120 # Protein_GI_number: 16121594 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Yersinia pestis # 7 261 3 257 262 362 74.0 1e-100 MSDQTLSGLSLSYFSAGYPRRKVIENLTVPHLPRGKITALLGPNGSGKSTLMRAMAGLGP CRGELLLEGENLLTQPFSRRAEQVVYLPQTLPAGVHLHVLESIIVAQRAAGGRHSPQHQE EVMALLRQLGIAHLAMSYLDQLSGGQKQLVGLAQSLIRQPRLLLLDEPLSALDLNYQFHV MDLVRRETRRRNIVTLVVVHDINIALRHADHVLMLKAGQLLGDGTPAAVITPETLAAVYG VRGRIEPCSQGVRQVIIDGLVDSEA >gi|289776635|gb|GG745509.1| GENE 320 333110 - 334192 1726 360 aa, chain - ## HITS:1 COG:YPO1311 KEGG:ns NR:ns ## COG: YPO1311 COG0609 # Protein_GI_number: 16121593 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 19 358 19 358 360 428 82.0 1e-120 MRLTSDSVLDGLPAGTSGVIDDYRRIVRRRLLLMLLLALLIVASLLLDFMLGPSGLPLQS LWQTLTDPASADPGTRAIVWDIRLPYAVMAIIVGLALGLAGAEMQTILNNPLASPFTLGV SSAAAFGAALAIVLGIGLPGIPGQWFISANAFIFALLAALLLDGITRWTQVATSGVILFG IALVFTFNALVSMLQFIANEDTLQGLVFWTMGSIDRASWSKVAILLVALALVMPLSLRSA WKLTALRLGEDRAISFGINVRRLRLTTLLRISILSALSVAFVGPIGFIGLVAPHIARMLF GEDHRFYLPASALIGALVLSLASIASKNLIPGAIIPVGIVTSLVGVPFFLSIILRHRGQA >gi|289776635|gb|GG745509.1| GENE 321 334199 - 335317 1454 372 aa, chain - ## HITS:1 COG:YPO1310 KEGG:ns NR:ns ## COG: YPO1310 COG0614 # Protein_GI_number: 16121592 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 4 356 7 363 381 227 34.0 3e-59 MARKSVRSLLLTALIATPLFSYATQYPLTVTDLDGRQVTLAKEPQRIILQDGRDIMTLAL LDRDNPFKRLVAWNNLAKKQDVATWQMLKTTWPQSATILDMGFSDKGNVDLESVIARQPD LMIAQLRARPALMESGVIDKLSALHVPVLFVDYEIDPAKDTAPSIDLLGKVLNRESQAKA FTDYYRQQLQTIRQKTAAITPKANVFVEALAGNSDACCFTHGHSGWGGLVEAVGANNIGS QLLPGASGFVSLEKIISMKPDAWIMTGSKRGNSQVLPLGYEVKPEAVKAQAQILLARPGV SQIPAVQEKRAYGVYHHFYNHPWNIVGMEYLAKDIYPQAFGDLNPDETYHYIVRHFTDLP DQPFVFSWQQSE >gi|289776635|gb|GG745509.1| GENE 322 335589 - 335978 512 129 aa, chain + ## HITS:1 COG:no KEGG:KP1_1443 NR:ns ## KEGG: KP1_1443 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 129 13 141 141 146 100.0 3e-34 MKKAMIALSAILVAAPVFAATTHATDDTVAAANANANTAKEKLHQAQHEGEEQQLKAKHA AEGKQDSVGSQVSEGAQKTWNKTKEGTEKGWDKTKEVSEKGWNATKSGAEKGWDKTKTGA EELKNKVTE >gi|289776635|gb|GG745509.1| GENE 323 336147 - 336602 494 151 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3853 NR:ns ## KEGG: Kvar_3853 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 151 1 151 151 268 99.0 6e-71 MKKMISLAVILSCVLSVPAFADGPNDGHRPGQPTVWQNGPDHDGHAPQGGPDAHHQGDHD QRGPDRDGHGKRDQARHEQDHFAWRGNDFRKGHPAPAPFRGDEYRVRDWSDRGLPPPPEG HHWSYIDGNYVLIAAATGIITSILVSGALGH >gi|289776635|gb|GG745509.1| GENE 324 336667 - 337254 705 195 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3852 NR:ns ## KEGG: Kvar_3852 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 195 1 195 195 342 100.0 4e-93 MKLQTLSLAAIVMLAGCSAQGDTASQQRASIQKMRSETLNKLYALQPEARSDIQHAKGYA VFANNSSKILLFGFGSGYGVVRNKATGKDTYMKMAQGGAGLGMGIKQQRTVLVFHDKAAL ETFIRQGYMVGADANAAAKYDDKGIAPIAASTSGVASDTASLPSKVNVYDLTEKGLAAQA MINGYKYWPDAALNP >gi|289776635|gb|GG745509.1| GENE 325 337489 - 338667 1586 392 aa, chain + ## HITS:1 COG:PA2922 KEGG:ns NR:ns ## COG: PA2922 COG1473 # Protein_GI_number: 15598118 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pseudomonas aeruginosa # 5 389 6 386 389 429 56.0 1e-120 MSDYVIPEIKATEDEMISIRHYLHANPELSLEEFNTSELVAGKLAEWGYQVTRGLGKTGV VGSLSKGDSPRTIGLRADMDALPIHETTDLPWASTVPGKMHACGHDGHTTILLAAAKYIA SPACQFNGTVHLIFQPAEEAIGGADLMIKDGLFEQFPCERIFGLHNMPGLPVGKLGFYAG NFMASADTVKVTITGYGGHGAHPERTVDPIVAGAALVMALQSIVARNVPPGETAVVSVGT FQAGIASNVIPESVVMELSVRAMKPDIRDLLIKRIHELADFTAKSYGASSVVEVYDSYPV LTNSPEETDFARALALEVFGREGVLESVSPMNASEDFAFMLRERPGSYFLLGNGEKGEKG GCMVHNPGYDFNDDIITTGATLFARLVEKHCR >gi|289776635|gb|GG745509.1| GENE 326 338687 - 339463 1068 258 aa, chain + ## HITS:1 COG:ECs3193 KEGG:ns NR:ns ## COG: ECs3193 COG0834 # Protein_GI_number: 15832447 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 23 257 26 260 260 251 51.0 7e-67 MKKSLLLWLALMASTSALAEGGKEIRFGVDPTFAPFEWKDPQGKLAGFDIDLGNAICQQL QAKCVWVESNFDGIIPALKARKFDAILSGMYMTEKRKAQIAFSDKLYNGPVFLVARKNTL QGNTPEQLKGKTIGVEQGSAQETYVNQHWRPQGINIVAYQGADSVVRDLESGRIDGAVLS GMMADYSFLQQPQGKEFAFVGGHLQDDTLFGAGAAIGLRKDDEALRQEINGAIAKILADG TYKKLAGKYFSFDVYSGT >gi|289776635|gb|GG745509.1| GENE 327 339591 - 340544 1275 317 aa, chain + ## HITS:1 COG:SMc00374 KEGG:ns NR:ns ## COG: SMc00374 COG0667 # Protein_GI_number: 15964047 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Sinorhizobium meliloti # 1 316 32 346 347 389 62.0 1e-108 MMTRPLGKTGFSIAPLVFGGNVFGWTIDEKTSFALLDAFVDHGFDAIDTADVYSRWAEGN QGGESETIIGRWLQARPGMRDKVKIFTKVGSDLGLPGHKGLSKAWIQQAVDDSLRRLNTD YIDLYFSHWPDPQTPVAETLEAFHSLQQAGKIRAMGASNLDAMQLAGALEVARKGGLPAW QVLQPEYNLYHRSAFEGALCDLCVSRDIGVVTYYSLASGFLTGKYRQPSDLAQSQRGGGI GKYLNPRGMRIIDTLVAVADEQGAKPAEVALAWLIGREGVTAPIASATSVAQVESFARAA ALSLSAEQVARLDSASA >gi|289776635|gb|GG745509.1| GENE 328 341531 - 342322 1155 263 aa, chain - ## HITS:1 COG:no KEGG:KPK_4057 NR:ns ## KEGG: KPK_4057 # Name: moaF # Def: MoaF protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 263 1 263 263 545 100.0 1e-154 MTSEAVFIQVGALADGFAPHGNLLATTSLPAGETFTFYVAGSKPQQLVIEDDQTLSWNDK RAPWRATALRPDILFIDFLDPERDNASISAVCNLTQRNATLVYGQLPDEAAARLDAFSRV EQGLPLTAVEARFVFARLDEQSGPLPDFTDALIGMRNQYTYSPTERYEHIYLNDNFYTWQ CLDGVEKGLADVDRCHYVQVAEDLYLFVWREKIIPTLGVILIDLQQMRTDGKIMGYQGSD FGALSNFPVGASAKILNVTRHQE >gi|289776635|gb|GG745509.1| GENE 329 342348 - 343124 835 258 aa, chain - ## HITS:1 COG:mll5433 KEGG:ns NR:ns ## COG: mll5433 COG1028 # Protein_GI_number: 13474531 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 6 248 13 256 257 125 36.0 1e-28 MARVVVITGGGTGIGAACARLMCAAGDRVFITGRRKAPLQAVADETGATALVGDAADGEV WGQRLLPAILDQAGGIDVLICSAGGMGNSPAAETSDSQWREALDGNLTSAFASVRACLPS LIARRGNVLFVASIASLAAGPQACGYVTAKHALIGLMRSVARDYGPQGVLANAICPGWVT TPMADEEMRPLMEAEGLSLTEAYQRVCRDVPLRRPASPEEIAEACQFLCSPQAAIISGAT LVADGGASIVDVPTLAFA >gi|289776635|gb|GG745509.1| GENE 330 343633 - 344316 668 227 aa, chain + ## HITS:1 COG:STM3124 KEGG:ns NR:ns ## COG: STM3124 COG2771 # Protein_GI_number: 16766424 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 227 1 227 227 325 75.0 4e-89 MSALLKASRNDAIIARCLQTISQLIPLTSAVFYRVNNRLKPESYILHNISDNTHQQYLEN FQPLDPLLPSHFSHQNTTVAAMTPRLCDRNRHYYHEFMLPNNVRDMTEIFIRRERRIIAG ISLMRDVPFSSEERQRAQAVLPLVELAIRDCLQEDDDLPAILTAKEREIVGMVREGASNK LIARQLDISLSTVKTHLRNIFAKTEVVNRTELVSRTWMPAAQRTMHL >gi|289776635|gb|GG745509.1| GENE 331 344433 - 345605 1452 390 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3845 NR:ns ## KEGG: Kvar_3845 # Name: not_defined # Def: major facilitator superfamily MFS_1 # Organism: K.variicola # Pathway: not_defined # 1 390 1 390 390 510 98.0 1e-143 MSSTPLTDNALSRPAGLVVSLRLLAAIVIFAAIAPGILMTAPAVAAQLASKWQLKPGQIG WLFSAELGAMSLATLPAWWWMSRLDWRRVALMAGVVFLTANLASAVVTQYETLLAARFLA SLAGGTLMILCISCAAGTPNPSRVYAFWVLGQLLLGMLGLLVLPGLFATFGLKVVYLILA AIMLCCLPLVSAFPPRFQPLSASHQQPSTALWRQALAVLAVLTFYISLSAVWTFIGTIGS AAGLTPTQVGLVLAAATVCGIIGAGGAALRGTQRADRLPVWLGYGLLIVSVGLLIGQPLL VRYAIAALLFKFTWTFVLPFILARVAGLDNSGRLMNSINLVIGGGMAAGPALAGALLQHF ASADPLLAAAGVCALLSLILIAAASAAGKA >gi|289776635|gb|GG745509.1| GENE 332 345622 - 346737 1510 371 aa, chain + ## HITS:1 COG:PA3774 KEGG:ns NR:ns ## COG: PA3774 COG0123 # Protein_GI_number: 15598969 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Pseudomonas aeruginosa # 1 370 1 370 380 543 70.0 1e-154 MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTP QLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLAC AAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQLGLGKVAIIDW DVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRL CGGKLVMVHEGGYAESYVPFCGLAVMETLSGIRTEVQDPLREFIQQQQPRAEFAQFQRQA LDRLAQRFGLQ >gi|289776635|gb|GG745509.1| GENE 333 346836 - 347123 80 95 aa, chain + ## HITS:1 COG:asl4856 KEGG:ns NR:ns ## COG: asl4856 COG4680 # Protein_GI_number: 17232348 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 12 92 5 85 85 114 64.0 5e-26 MKTLRDFWAENPDAEQPLKAWVDEATKADWKTPAEIKDQYRSASILKNKRVVFNIKGNDY RLIVAVAYLRGWVFVKFIGSHKEYDEINAETIERK >gi|289776635|gb|GG745509.1| GENE 334 347127 - 347486 534 119 aa, chain + ## HITS:1 COG:all4855 KEGG:ns NR:ns ## COG: all4855 COG5499 # Protein_GI_number: 17232347 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Nostoc sp. PCC 7120 # 4 117 5 116 126 107 51.0 6e-24 MKIKPIRTEQDYEAALSAVEPFFDNEPALDTPEGDFFEVMCLLIAEYEKKHYPIEPPTPI EAIKFRMEQQGLTVKDLEPAIGKSNRVYEILNGTRNLTLPMIRRLHAQFGIPLESLIGA >gi|289776635|gb|GG745509.1| GENE 335 347503 - 348045 604 180 aa, chain - ## HITS:1 COG:no KEGG:KPK_4051 NR:ns ## KEGG: KPK_4051 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 178 1 178 197 343 97.0 1e-93 MSSVPWFETPLMNAVQRDLAGWPCEKLSERSALLRLNDATAVTFSVRQKRLFMASIHSCE FVVEGPVTRPVSGNIRAHQSGWWKRQPIRFIGGKGSVELASYLNGFPNLQQTLSELDYRR FSLTFDSSGWRCSIEPWAASEVVCKMPPLRRYLRLEAQQRMLLLSVLAMINQAVNQWMDE >gi|289776635|gb|GG745509.1| GENE 336 348023 - 349522 2286 499 aa, chain - ## HITS:1 COG:STM3126 KEGG:ns NR:ns ## COG: STM3126 COG0531 # Protein_GI_number: 16766426 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 499 1 499 499 815 88.0 0 MFSNRLASHLERGVVGFPTTLASSVGLIMASPVILTVTSGFGMGGDTFALAVLLAFIMMQ AQVTTFAEAATLIPTTGSVYDYIACGMGRFFAITGALCAYLIVHIFAGTAETILAGIMAL VNFESINAQMAAHQNTWMVGVGMVVIFGLLNAIGVEIFGKVEVVLTFGMWTTLTIFGLCG IFMAPVTHLSGWFGTPLNISDINGLFGYIGMAMFMFVGCELVTPMAPEIKQAHRTIPRAM ALGLLGVASCMFIYGAAINRQVENTVLDAANNVHLLDTPMAIPAFAERVMGHAGQYWLGV GLLLAGCATINTLMAAVPRIIYGMALDGALPRFLTWLHPRFKTPVIAIAIGVAIPCLHAW YLNGDLDRIVPLILAAVCAWGVAYLLVTLSVVMLRIRRPDLPRAYRSPWFPLPQIISSVG IIIAIVNITPPGMDSRQVLVPFGIMLGLTAAYALFWTVCVQRVNPFKPLVVEEVVERAIS NYEKQTRGEMTPDVLRPLV >gi|289776635|gb|GG745509.1| GENE 337 349962 - 350327 558 121 aa, chain - ## HITS:1 COG:STM3127 KEGG:ns NR:ns ## COG: STM3127 COG3450 # Protein_GI_number: 16766427 # Func_class: R General function prediction only # Function: Predicted enzyme of the cupin superfamily # Organism: Salmonella typhimurium LT2 # 1 120 1 120 124 196 82.0 9e-51 MHAFKLKHPVPDLQPIGSVSLLGATPTAGDPQVAGAMIYGEPQDAFTCGLFSSTEGSFTM TYPFTEHATVLEGEVELTVAGGEPQRFAPGDSWFVKQGTEVEWKILTPRFVKHYLANVET R >gi|289776635|gb|GG745509.1| GENE 338 350341 - 351642 1876 433 aa, chain - ## HITS:1 COG:STM3128 KEGG:ns NR:ns ## COG: STM3128 COG0665 # Protein_GI_number: 16766428 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Salmonella typhimurium LT2 # 1 433 1 433 433 800 90.0 0 MNIKIDALNYYGATKKYHLNFPALREDIEADVVIIGGGFSGINTALELAEQGITNVVVLE ARHLGYGGTGRNGGQVMAGIGHDIEAVKKHVGKEGLETLFKIANLGAGIIRERIRKYHID ADFVPGYGYLAYNQRQLKTLRQWEKEFKAATPDEEIELYTGKEVQQVVGSEVYCGALKHM GGGQIHSLNMLLGSAQAAHSLGVKIFESSPVVEVNYGKQVQVRTAMGSVKAAKLLWACDS FLNNMEPEIYNKTLVTYSYQVSTEPLSDELIERISPLRGAFSDIRPVINYYRVTRENRLL FGSATRFVEYTPNDFAAWNRTLLAEVFPYLKDVKIDFAWGGPMACSANLFPQIGTLRDHN NVFYVQGYSGFGVTPSHIVCKILAEGINGGSDRYRLLSSIPHATIHGRDSLRLLLVTAGK LMHQTAGFWKGRS >gi|289776635|gb|GG745509.1| GENE 339 351802 - 353286 1982 494 aa, chain + ## HITS:1 COG:STM3129 KEGG:ns NR:ns ## COG: STM3129 COG1012 # Protein_GI_number: 16766429 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 494 1 494 494 811 80.0 0 MSEITLLAEVTAFLRQPHGQFIAGQREAGHGAPFAVINPATGQAIAEVTAADSDQADRAM ESARQAFSQWREMPTLARGTLLLKLADALAEHREALAQLESLCSGKTIMLARMLELDQSV AFLRYFAGWAGKVTGETLDVSLPSMNGEKYTAFTRRQPLGVVVGIVPWNFSIMIAIWKLA AALVCGCTIVLKPSEYTPLTLLRVAELAKAVGIPDGVINVVNGTGGEIAQRLMTHPACAK VSFTGSVATGEKVQQSACASGKRVTLELGGKNAALFLDDLTPEAMVNGIIEAGYLNQGQI CAAAERFYLPQGKLDAVLALLKDKLSAFAPGSPLDEQTLMGPLANRQQYEKVLKLIQTAR DEGDTIVCGGEALPGEGYFLQPTAVKVRSEESTLMREETFGPVCSFIGYRSEEEALARIN ASPYGLAASVWSDNIRQALRYSEAIDAGIVWVNMHTFLDPAVPFGGMKGSGIGREFGSAF IDDYTELKSVMVRY >gi|289776635|gb|GG745509.1| GENE 340 353684 - 354766 1314 360 aa, chain + ## HITS:1 COG:yncE KEGG:ns NR:ns ## COG: yncE COG3391 # Protein_GI_number: 16129411 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 43 357 35 353 353 227 40.0 3e-59 MKYTLPTLTLAISAALSGCATPHSSAVSQPVVDSPAPNVAQPLQRQLAEGLYEMALSPQG DALYVASAEGFKNVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLYVSNSLDGG ISAIDTATGKVKNRLLFSERNEKGRPYGARQLLLLNNTLYVGAVADPAQIWVVDATTLKL KTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPHNQRIEQRWKPLGDKPALLLNMA EDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYISQRESGKV ISLDASRYTLKKSWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSVVRIDLNAQ >gi|289776635|gb|GG745509.1| GENE 341 354814 - 357024 2827 736 aa, chain + ## HITS:1 COG:YPO1753 KEGG:ns NR:ns ## COG: YPO1753 COG1629 # Protein_GI_number: 16122009 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 28 736 43 758 758 708 51.0 0 MGQIMHTTHYSSFPLRKTLLALAIGAASQTAMAADAAAAKQPGEETLIVEANETSDFKSG GDLVVPAFLDGQIAHGGRLGMLGEQKAMDVPFNVIGYTSKLIQDQQAKTIADVVSNDAGV QAVQGYGNFAETYRIRGFKLDGDDMTMGGLAGVVPRQVMDTQMLERVEIFKGANSLLNGA ASSGVGGMINLEPKRAEDLPTARVGVDYTSDSQVGGTLDLGRRFGDNNQFGARVNLVHRE GEGAIDNDKRRTTLASLGLDYRGDRFRSSLDFGYQKKTFHGGTMGVNISGVDFVPALPDN SKNYSQKWGYSDIESEFGMAKAEYDLTDSWTVYSALGGQHSHEIGTYSAPKLLNKNGDAT VGRLDTNRIIDAISGMGGVRGDFNTGAISHKVNLGYAAQVHTDATAWRMSAKNPTTNIYD NRDVAMPDNAYFGGNYHDPLVTSRSRTQGWLLSDTLGFFNDKVLFTAAARHQKVVVRNYS NATGLEDTSSRYTQSRWMPTFGLVYKPWEQLSLYANHTEALQPGSVAPTTAANAGQSTGI AHSKQDEVGVKIDYGTIGGSLALFEIKKPNAISDTAGNYGLDGEQRNRGVEMNVFGEPML GLRLNASTVWLDAKQTKTAKGATDGKDAIGVANFYAVLGAEYDIKPVEGLTATARVNHSG SQYADAANTKKLDSYTTLDLGLRYRMRLNADQNEMTWRVGVTNVTNEKYWSGIDDTGTYL FEGDPRTVRVSMSYDF >gi|289776635|gb|GG745509.1| GENE 342 357131 - 358507 2274 458 aa, chain + ## HITS:1 COG:pheP KEGG:ns NR:ns ## COG: pheP COG1113 # Protein_GI_number: 16128559 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 1 457 458 736 86.0 0 MKDASTSSDAVEESGPTLHRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYA VAGIVAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTA AGIYMQYWLPDVPTWVWAAAFFLIINAVNLVNVRLYGEAEFWFALIKVLAIIGMIAFGLW MLFGGHGGSKAGFDNLWKHGGFLATGWHGLILSLAVIMFSFGGLELIGITAAEAQNPEKS IPKAVNQVVYRILLFYIGSLVVLLALYPWVEIKSDSSPFVMIFHHLDSNLVASALNFVIL VASLSVYNSGVYSNSRMLFGLSVQGNAPTFLARVSKRGVPVNSLLLSGVITSLVVVLNYL LPHEALGLLMALVVATLLLNWIMICMAHLKFRAAQRRKGRESKFKALLAPASNYFCIAFL GLILVLMCTIDGMRLSAILLPVWILFLFIAFKLLRRPA >gi|289776635|gb|GG745509.1| GENE 343 358659 - 359900 1899 413 aa, chain + ## HITS:1 COG:STM2142 KEGG:ns NR:ns ## COG: STM2142 COG0477 # Protein_GI_number: 16765471 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 21 411 6 406 423 253 38.0 4e-67 MVTTTEGRESVRVSHRFLVPRLSLMMFMQFFIWGSWSVTLGLVMTRYEMSLLIGDAFSAG PIASILSPFVLGMLVDRFFASQKVMAVMHLAGAAILWFVPQALVAQNGALLIGLLFGYTL CYMPTLALTNNIAFHSLANIDKTFPVVRVFGTIGWIIAGICIGVTGISDTTGIFTLAALC SVALAIYSLTLPHTPAPAKGMPVQFRDLLCADAFALLKTRHFLIFSLCATLISVPLGTYY AYTASYLADAGVKDVSTAMSFGQMSEIVFMLVIPLLFRRLGVKYMLLIGMAAWFVRYAFF ALGVSEEGRFLLYLGILLHGVCYDFFFVVGFIYTDRVAGEKVKGQAQSMIVMFTYGIGML LGSQISGALYNHLVAGQSVPQAWVTFWWIPAVAAAVIALIFLFSFQYNEKEPH >gi|289776635|gb|GG745509.1| GENE 344 359917 - 360939 1134 340 aa, chain + ## HITS:1 COG:AGl986 KEGG:ns NR:ns ## COG: AGl986 COG1082 # Protein_GI_number: 15890609 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 338 1 337 349 488 68.0 1e-138 MKTIKGPGIFLAQFIGPQAPFNTLAGVAQWAAGLGYRALQIPCNHPAIFDVERAAASQTY CDEVRGTLAEHGLVISELSTHLEGQLVAVHPAYDAAFDAFAPAALHGDPQARQCWAVEKV RQAAVASGRLGLKAHATFSGALAWPFFYPWPPHNQPLLDEAFAELARRWRPLLDHFDEQG VDVCYEIHPGEDLHDGVTFERFLALVDNHPRCNMLYDPSHLHLQQMDYLTYIDIYHSRIK AFHVKDAEFRRNGRNGVYGGYQPWQQRAGRFRSPGDGQIDFKGVFSKLTEYDFDGWAVLE WECCLKDAETGAREGSEFIRRHIIPVAGRAFDDFAAGGRE >gi|289776635|gb|GG745509.1| GENE 345 360941 - 362098 1217 385 aa, chain + ## HITS:1 COG:CC1630 KEGG:ns NR:ns ## COG: CC1630 COG0673 # Protein_GI_number: 16125876 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Caulobacter vibrioides # 2 384 3 373 376 162 30.0 1e-39 MIQVAIIGAGFIGPAHLEALRRLGDVEVVALCDSRLEAAQRKAQALNIAHAYDSVEALLA HPGLQVVHNCTPNHLHAQINRQILAAGLHVFSEKPLCMTAEEARELVALAARAGVVHGVS FVYRQFAMVQQAAAMIRHGEVGRIFAAHGSYLQDWMLLETDYNWRVDSAQGGASRTVADI GSHWCDTVQFMTGRRIVEVMADLSIVWPTRKAPVNGKATFSAVHEAQAYETRPVDTEDFG SVLLRFDDGSKGSLMVSQVSAGRKNRLAVEINGSLCSLAWDQEVPQRLWIGHREQPDRLL SDDPSLLRPEAAASAHYPGGHIEGWPDAFKNMMGHFYQAVRAGKMPEAGAGARRFAAFDD GADVMYIIEAIVKSHQQQRWVSVER >gi|289776635|gb|GG745509.1| GENE 346 362118 - 362534 534 138 aa, chain - ## HITS:1 COG:no KEGG:KP1_1473 NR:ns ## KEGG: KP1_1473 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 138 50 187 187 263 99.0 2e-69 MRLSTAVLALSCALATITGCTSSKSSPERHAYAFVAHRSDFVGGNFTVNRQENYRLNLPT FTAMYARGQQDKAAGMSESDARRTAEAIKQQAAQGTRTEHAFTGNASDKWDNAMENKDAV LFGNELSGAYLDGYLGVK >gi|289776635|gb|GG745509.1| GENE 347 362768 - 363748 1353 326 aa, chain + ## HITS:1 COG:BH2313 KEGG:ns NR:ns ## COG: BH2313 COG1609 # Protein_GI_number: 15614876 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 325 1 326 337 202 34.0 6e-52 MSIQKIARLAGVSVATVSRVLNNSDTVKAKNRERVLQAIKESNYQPNLLARQLRTARSNM ILVMVSNIANPFCAEVVKGIEEEAEKNGYRILLCNSGSDLARSTSGLQLLSGKMVDGIIT MNALSSLPELTTMIGDAPWVQCAEYADTGSISCVGINDVEAAQGAVSRLADSGRRRIALI NHDLSYRYARLRERGYKSVLHVHGLAYQQVTYAQDLSAAAGKRAMEQLLSQDEQPDAVFA VSDSLAAGALRAIAQAGLRVPEDIAVIGFDGTELAEVVSPQLTTVEQPSRAIGRTAVALL MKRIDDPDAAVERVMMDWRVIARASA >gi|289776635|gb|GG745509.1| GENE 348 363751 - 364995 1501 414 aa, chain - ## HITS:1 COG:STM0569 KEGG:ns NR:ns ## COG: STM0569 COG0668 # Protein_GI_number: 16763946 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Salmonella typhimurium LT2 # 1 412 1 413 415 678 83.0 0 MQELISQIAALGIEITPTRSLMIIFGIILFTAVVVHLILHKVVLRAFEKRALASSHLWLQ IITQNKLFHRLAFTLQGIIVNVQAVLWLQKGSEAAEILTTVAQLWVMIYAMLSFFSLLDV ILKLAQKFPAASQLPLKGIFQGIKLVTAIIIGILIISLLIGQSPAILISGLGAMAAVLML VFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPT WSLVSDSFKNWSGMSASGGRRIKRSLNIDTTSIHFLDEQEQQRLIRAKLLKPYMDSRHEE ISAWNQQYAGEQSVLNERRMTNVGTFRAYLQEYLRHHPRIRQDMTLMVRQLAPDANGLPI EIYCFTNTVVWAEYEGIQADIFDHVFAVVEEFGLRIHQTPTGNDIRALTGAFSR >gi|289776635|gb|GG745509.1| GENE 349 365066 - 366493 2116 475 aa, chain - ## HITS:1 COG:PA1262 KEGG:ns NR:ns ## COG: PA1262 COG0477 # Protein_GI_number: 15596459 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 9 470 11 472 480 385 58.0 1e-106 MNTSAVSPGRAGLLLLLGGQMLPLIDTSITNVALDAITHTLAASATQLELIVALYGVAFA VCLAMGSKLGDNYGRRRLFMWGVALFGIASLLCGMANSIGALLAARTLQGAGAALIVPQI LATLHVTLKGPAHARAISLYGGIGGIAFIVGQMGGGWLVSADIAGLGWRNAFFINVPICL LVLALSRRYVPETRRETPSRIDWQGTLYLALILCCLLFPMALGPELHWPLWLQLMLVAVL PLLFAMRQSALRQQQRGDHPLLPPRLLQLTSIRLGMAIALLFFSAWSGFMFCMALTMQEG LGMAPWQSGNSFIALGVAYFISALYAPRLIARHSMGRILLTGLAVQIAGLLLLCATFSRF GIATTALTLVPATALIGYGQALIVNSFYRIGMRDISASDAGAGSAILSTLQQATLGLGPA ILGSLFLALARRGGGNYPQALIDFLLVEVAMMLLLGAIALWLRHHLNRQPATVAS >gi|289776635|gb|GG745509.1| GENE 350 366611 - 367468 997 285 aa, chain + ## HITS:1 COG:PA1263 KEGG:ns NR:ns ## COG: PA1263 COG1396 # Protein_GI_number: 15596460 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 14 282 46 314 314 301 57.0 1e-81 MPQRELTIAVPDDRRKQLGAFLRARRESLDPQRLGLPRVGRRRTPGLRREEVAMLADVGV TWYTWLEQGREVNPSEAVLVGVANALQCSPLETRHLFVLAGLTPPEATQVTVCEGISPGT RRMLDSLMPQPASIQKPNFDIVAWNDSFCRLMGIDFATLPEEDRNCIYLYLTHETWRSRI ENRDVLPTFVSYFRAAMAEHRGDPAWENKLARFFAASSEFEALWHQRYEVRGVENQIKHF NHPQLGRFSLQQMYWYSAPRNGSRLLVYLPMDEAGEQALAWLDQH >gi|289776635|gb|GG745509.1| GENE 351 368294 - 369328 1500 344 aa, chain + ## HITS:1 COG:no KEGG:KPN_00545 NR:ns ## KEGG: KPN_00545 # Name: not_defined # Def: putative permease # Organism: K.pneumoniae # Pathway: not_defined # 1 344 1 344 344 611 97.0 1e-173 MNVTRKEQRIIQRALNAWQVSGELTPADSQRLAQTLRVSPFDWRRLSRYAFWTALACVLI ALGSLFADSELVAWLLSLFSHSALTRILLPALLAVACYGWGFRRQRRERQWHYSTEAILF LGVVFTAVSLWQLGERLDNGSGHIAPLFLAGCVIYGAIGYIARSGLVWLFFLLALGNWFG AETGYVSGWGAYWLGMNYPIRFVLFGGALLALCYGAQSLLRQRQLFTVSKAMGLTYLFIA LWILSIFGNYDADSWYQVSQARLLPWGLLFAVAAGVCIFISLKTDDGMLRGFGLTFLAIN LYTRFFEFFWNGMHKVLFFLILAVSLAVIGRYAERIWHAGNVKP >gi|289776635|gb|GG745509.1| GENE 352 369425 - 372154 2120 909 aa, chain + ## HITS:1 COG:STM0571_1 KEGG:ns NR:ns ## COG: STM0571_1 COG1221 # Protein_GI_number: 16763948 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 815 85.0 0 MNKESIFRQLEQRIAGRALTAEALGEFNAMAIADSLKQKRSIISHHLNNLHREQRVVKVN GRPVLFLPVTVLRDHHRLAVRHGEYASIQALCAERQDSLAQLIGAQGSLQEALRQCKAAI SYPGAGLPLLLRGPTGTGKSFLARQLWHYAIDEGILPADAPFTVFNCAEYANNPELLTSK LFGHAKGAFTGADKAVPGLIETSNGGVLFIDEVHRLPPEGQEKLFHFMDNGSWRRLGEST DERSATVRLIFASTEDLEKHFLATFIRRIPVIVKILPIAERGQFERLAFIHHFFRREAQR LNHDLALDGEIVSQLMRETLEGNVGGLENLIRNICASAWTFGERDSGLLHIKAGLLPDRL LADAPFSLQQNSERVMIYRDGDAQPLFSGRHHEYQRLTENICSLCEELAQDNISVRTFEK LIYQNVTLYLDALMNQESTVSLQDKRLRFIEDVGKAIAVNYDLQLNVEFAYLTGRYLTSL PLAPRSVAEPVRLVMQRWLDSSAGLAQRIAEKLLDVVNNKYDLLIDTLDRLAVAAIVSNA IDATSGGKVKALIIAHGYSTASSIAGVANRLIGEKIYQAMDMPMEVAFNDVSRAVVDYLQ HTDTRAGVMVLIDMGYTKEIADALLSVIHGPLVVVDNVTTRMALNVASEIALGKNIEQIA EEIVPLNQSRWDVFWPAEKKERALLVTCITGIGTAFKFKNLMEKSLLNDFDINIIACEYT RLKNSRTAVSLLHQYEVIAVVGTHDPQLAGVPWVGIEELLGEQGHRHLSQLLSGYLNEKQ IALINKNMVREFSLHNVVNSLTILNAGKTMGHIETIIAEWQNTLGFHFNNNLIISLYVHL SCMIERLVMRNEISHYKDLEQFTRQHGEFIAMVNHSFQRLKILYNVALPVAEIGYIHDIF ELRIEDFSW >gi|289776635|gb|GG745509.1| GENE 353 372207 - 373193 1117 328 aa, chain - ## HITS:1 COG:STM0572 KEGG:ns NR:ns ## COG: STM0572 COG2222 # Protein_GI_number: 16763949 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Salmonella typhimurium LT2 # 1 328 1 328 328 596 85.0 1e-170 MSIAHKNAHTIIRDILSKQHIERVWFVGCGGSLTGFWPGKYFLDCEAKKLAVGYVTSNEF VHATPNALGKNSVVILASQQGNTAETVEAARIARQKGAATIGLVYTPGTPLCEHSDYTIE YCWARYPETVDPTQQKAAYSLWLALEVLAQTEGYAHYDQMVSAFASFESVVRGAQQQVQA DARHFAEAWKSEKVIYMMGSGPSFGAAHQESICILLEMQWINSASIHSGEYFHGPFEITE AGTPFILLKSSGRTRPLDDRAIRFIERYQGKLQIIDVEKVGIDTLHTSVREYFCGLLHNC VLDVYNLALATARNHPLTTRRYMWKVEY >gi|289776635|gb|GG745509.1| GENE 354 373258 - 374319 941 353 aa, chain - ## HITS:1 COG:STM0573 KEGG:ns NR:ns ## COG: STM0573 COG0449 # Protein_GI_number: 16763950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Salmonella typhimurium LT2 # 7 351 1 345 347 573 80.0 1e-163 MHVEDYMNETPARLLAMLTQTREDLWQAAKALTERGITRIILTGSGTSYHGALTARSFMQ QWCGLPVDVYWPFLLDDSALTLSDKALVIGISQGGGSLSTLATMERARAAGHLTASMAGE APAVIDRAADLVLTVPCGEERAGAKTKGYHCTILNLMLLALAVASRQRRLSDEERKALLI RMDTTFNHLPTLIEASQAWVLNHARPLIDSADIRLTGPARLFGTVQEGALKMLETLRCPV AGYEFEEFIHGIYNAFDERSTLIMLDPFPDERQDRLAEILGGWTQHIYRIGPQVENNGKN MPFAFINDPDFAVFEYIIPLQMVCARLPPVKGIDPAIPKDPQFHQKMKSKQPN >gi|289776635|gb|GG745509.1| GENE 355 374337 - 375191 1087 284 aa, chain - ## HITS:1 COG:STM0574 KEGG:ns NR:ns ## COG: STM0574 COG3716 # Protein_GI_number: 16763951 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 1 274 1 274 284 499 91.0 1e-141 MSEMTQTVTGATQPQSDDASRITARDLRSVFWRSFTLQGSWNYERQQHMGYAFAMSPALK RIYQDPTELGRALQRHLVLFNTTPHLSTFIFGLSIAMEEENQRNPEFNEESINAIKTSLM GPLAGIGDSIFWGSLKVIAAGMGIYFAQQGSLLGPILALLVYNLPHLLCRWYGLKLGYRA GTTWLMRIYQSGLMDRVTYIASIVGLMVVGAMTASMIDITTPLSFTAGQTTMKAQEFIDK ILPSLLPLLFTLGMYKLIRKGVNINWILLGTVAFGMAASALGLL >gi|289776635|gb|GG745509.1| GENE 356 375194 - 375937 723 247 aa, chain - ## HITS:1 COG:STM0575 KEGG:ns NR:ns ## COG: STM0575 COG3715 # Protein_GI_number: 16763952 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 246 1 246 247 353 93.0 2e-97 MLLTATLLGLIAALGILDGRLLGVSMIDRPLVMCALTGLVCGNLHEGILIGATLELIFLG NVAIGAAHPPDIVTGSVLATAFSIMSGRGPEAALTIAIPVSMLAQTLGILVRVVNARFGH LADRYAAQGNTRMVGLMHLAGPTLLYFLNGFLPVFFAILLGSSAVSWFLEAIPPVITNGL IVASKILPALGFALLISMMLSSKLMPYLGLGFLIAAYTKLDIIAIALFAVVLAFIISQFL NLKQQES >gi|289776635|gb|GG745509.1| GENE 357 375952 - 376422 447 156 aa, chain - ## HITS:1 COG:STM0576 KEGG:ns NR:ns ## COG: STM0576 COG3444 # Protein_GI_number: 16763953 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 156 1 156 156 254 87.0 5e-68 MIKLVRIDYRLLHGQVVFAWTRALDIDHIIVANAKAAADAFITMSLNLAKPAGVTLDIAT VEQAAEKLNSGKLDHKKVMVVLGNTAETLALVEKIPGISAINYGGLPQKEGARQFGKAIY LTDEEIAHSRALKEKGIRLEMRQVPAHSAELLNDQL >gi|289776635|gb|GG745509.1| GENE 358 376415 - 376849 375 144 aa, chain - ## HITS:1 COG:STM0577 KEGG:ns NR:ns ## COG: STM0577 COG2893 # Protein_GI_number: 16763954 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 144 1 144 149 209 84.0 1e-54 MKHIYVASHGHFARGLVNSLSLLIGDEHGVIPVCAYDEDIVTTEQLEQTLEHLIVQANGD EVVIFTDLLGGSINNSAVSVLMRHRNVFVVAGINLTLLLEFLLCEEATTEAAIIYATSAA RESIVFINPLITQPSSDPQGESHD >gi|289776635|gb|GG745509.1| GENE 359 377097 - 377750 1040 217 aa, chain - ## HITS:1 COG:ECs0616 KEGG:ns NR:ns ## COG: ECs0616 COG0778 # Protein_GI_number: 15829870 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 368 85.0 1e-102 MDIVSVALKRYSTKAFDATKKLTASEAEQLKTLLQYSPSSTNSQPWHFIVASTDEGKARV AKAASGTYVFNERKILDASHVVVFCAKTAMDDAWLQRVVDQEEADGRFATPDAKAANHKG RTFFADMHRKELKDDDQWMAKQVYLNVGNFLLGVAAMGLDAVPIEGVDFAILDEEFDLKA KGYTSLVVVPVGHHSVEDFNATLPKSRLPQSTTITEI >gi|289776635|gb|GG745509.1| GENE 360 377870 - 378238 511 122 aa, chain - ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 121 1 121 122 167 61.0 4e-42 MTPEMLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQK SLLNQEIYRSIEPGYHMNKKHWITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLR PR >gi|289776635|gb|GG745509.1| GENE 361 378238 - 378819 820 193 aa, chain - ## HITS:1 COG:STM0580 KEGG:ns NR:ns ## COG: STM0580 COG1309 # Protein_GI_number: 16763957 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 188 1 188 193 223 64.0 1e-58 MARPKSEDKKQALLEAATAAFAQSGIAASTSAIARSAGVAEGTLFRYFATKDELLNELYL AIKLRLVRMMIAGLDPHEKRPKENARNIWNSYIDWGVRNPMEHKAIRRMALSERITDETR RQVKESFPELNEMCQLSVKEIFLSEAYRAFGDALFLSLAETTIEFASHDPQRAREIIALG FEAMWNALHEADA >gi|289776635|gb|GG745509.1| GENE 362 379047 - 380114 1182 355 aa, chain + ## HITS:1 COG:XF1739 KEGG:ns NR:ns ## COG: XF1739 COG2220 # Protein_GI_number: 15838340 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Xylella fastidiosa 9a5c # 17 354 32 368 385 330 46.0 2e-90 MLLAAATTLPFVLNAGFGKAPQGAQLSQVEASPHYRDGQFHNQLPTPGFTGQKNMLAAWW DFLMTKRENARPAQPLPLVKTDLATLPLGQDVMVWLGHSSWYLQLAGKRILIDPVFSDYA APFSFINKAFPGDYPWRAEGMPDIDLLIISHDHYDHLDYATIRALLPKIKRVITPLGVGS HLRYWGMDGALITEADWQQAIPVSDEFTVHVLPARHFSGRGLKRNQTLWASFLFVTPQQK IYYSGDSGYGPHFKAIGDEFGPVDLAIMENGQYDQDWKYIHMMPDETAQAADDLRARAVL PGHAGRFVLAKHSWDEPYQRLAAASEGRAWRLLTPMQGEPLWVADKTQSFNAWWR >gi|289776635|gb|GG745509.1| GENE 363 380145 - 380486 578 113 aa, chain + ## HITS:1 COG:STM0581 KEGG:ns NR:ns ## COG: STM0581 COG2207 # Protein_GI_number: 16763958 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 113 1 113 113 205 90.0 2e-53 MTISAQVIDTIVEWIDDNLHQPLRIDDIARHAGYSKWHLQRLFLQYKGESLGRYIRERKL LLAARDLRDTDQRVYDICLKYGFDSQQTFTRVFTRTFNQPPGAYRKENHSRAH >gi|289776635|gb|GG745509.1| GENE 364 380503 - 380751 385 82 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3817 NR:ns ## KEGG: Kvar_3817 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 82 1 82 82 98 100.0 7e-20 MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFL ALGTLEFLVLRWVWRRWFSLER >gi|289776635|gb|GG745509.1| GENE 365 381253 - 383976 3733 907 aa, chain + ## HITS:1 COG:YPO0451 KEGG:ns NR:ns ## COG: YPO0451 COG0474 # Protein_GI_number: 16120780 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 1 904 1 902 908 1188 65.0 0 MTKMNNPKFTTPSGDTAPRQVWQQTVDAVLAQTKSQAAGLNSADAAERLNTFGPNALPEK KGKPGWLRFLAHFNDVLIYVLLAAAALTAIMGHWVDTLVILGVTVINALIGHIQESNAEK SLQGIRNMLSSDARVQRNGKHETIPTRDLVPGDIVILRAGDRVPADMRLIETHNLRVEEA ILTGESTVVDKITDALEGDLPLGDRVNMVFSGTTVSAGGGIGVVTATGAETELGHINQMM AGIEKHRTPLLVQMDKLGKAIFVIILAMMVALFIFSLALRDIPMGELLLSLISLAVAAVP EGLPAIISIILSLGVQTMARKRAIIRKLPTVETLGAMTVVCSDKTGTLTMNEMTVKAIIT ADCCYRVEGDSYEPQGRIFLEGSDEPVQVQPGTVLETWLRAIDLCNDSQLTQDERGLWGI TGGPTEGALKVLAAKAQLPAVEARLVAKIPFDSQYKYMSTLQHIDGEARVLITGAPDVIF AMCREQMSRHGAVPFEAHYWEEEMARFARQGLRMVAAACKPASLDATTLNHEDLQEGLIF LGIAGMMDPPRPEAIDAIHACQTAGIRVKMITGDHPQTAMSIGQMLGITNSSQAMTGYQL EHMDDAALAKAAVEYDIFARTSPEHKLRLVKALQDNGEVVGMTGDGVNDAPALRQADVGI AMGIKGTEVTKEAADMVLTDDNFATIASSVKEGRRVYDNLKKTILFIMPTNLAQGLLIII ALLAGNIIPLTPVLILWMNMATSATLSFGLAFEAAERNVMNRPPRKTGQHVMDGFAVWRV AFVGSMIAIAAFILEAWLAPRGHSPEFIRTVLLQMLVTAQWVYMINCRSSDSFSLSMGLL RNKGIWLVTGVLLLMQLVIIYVPLMQSMFGTEALPLRYWFITLVIGVAMFLVVEVEKRLT RRFRKTA >gi|289776635|gb|GG745509.1| GENE 366 384230 - 385231 1085 333 aa, chain + ## HITS:1 COG:YPO1000 KEGG:ns NR:ns ## COG: YPO1000 COG0845 # Protein_GI_number: 16121302 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 21 329 85 404 425 228 45.0 1e-59 MPVRVATVELAPHAEERAIPGRVEAIRAVDIRARTEGVIVQRHFQDGQYVTEGDLLFTLD DAQPRAALALAQAELKSAEASLRQSQQLLTRYERLINNHSISRNDVDTARMQRDVAAAAV QQAKARVEAQQIVLSYTRIAAPGTGRVGHSAFHVGTLINPSSGVLVDIVQLDPVRVSFAL DEAAFFSKSGQHADIHALKQAWLAQIEVDGKRRDGVLTSIDNRIDARTGSVAVRAEFANP QHRLLPGGSVTILFRPQELQSRVMIPAAAVQQDPQGFFSWVLKPDHTAGQRRLTLAGQQG QQFAVEKGLQAGEQVITDGAQRLREGAAVQVLN >gi|289776635|gb|GG745509.1| GENE 367 385245 - 388337 4101 1030 aa, chain + ## HITS:1 COG:YPO1001 KEGG:ns NR:ns ## COG: YPO1001 COG0841 # Protein_GI_number: 16121303 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1029 1 1031 1039 1139 61.0 0 MLTFFIRRPRFAMVIALLLTFVGAVSLKLIPVEQYPAITPPVVNVSASWPGASASDVAEA IAAPLETQLNGVDHMLYMESTSSDEGTYRLSITFAAGTDADLAAIDVQNRVAQALAQLPA EVQQNGVQVRKRASNLLMGVSLYSPLGTLSPLFVSNYASTQVREALARLPGVGEVQMFGA RDYSMRIWLRPDRMNALNITTDDVAQALREQNVQGAAGQVGTPPVFNGQQQTLTINGLGR LNEAASFGEIILRRGAQGQLVRLADVATIELGARSYSSGAQLNGKASAYLGIYPTPTANA LQVASAVRAELNRLHTRFPADLTWEVKFDTTRFVAATIKEIGVSLALTLLAVVVVVSLFL QSWRATLIVVLAIPVSLIGTFAVLYLLGYSANTLSLFAIILALTMVVDDAIVVVENVETK MAEGLDRLQATAQALQQIAGPVIATTLVLLAVFVPVALLPGIVGELYRQFAVTLSTAVAL SSLVALTLTPALCALLLRPRPARPAAVWRAFNRLLDGTRDGYGRLVGWMNRRPWLALAAT VAAGALVAFSFTSMPKGFLPQEDQGYLFASVQLPEAASLERTEAVMAQARKLLMANPAVE DVIQVSGFNILNGTSASNGGFISVMLKDWHQRPPLDAVMADIQRQLLSLPEATIMTFAPP TLPGLGNASGFDLRILAQAGQSSAELEQVTRQILQLANQHPQLSRVFTTWSSNVPQLTLT VDRDRAALLDVPVAQIFSSLQTAFGGTRAGDFSRNNRVYHVVMQNEMQWRERAEQISELY VRSRDGERVRLSNLVTITPTVGAPFIQQYNQFPSVSVSGSAAEGVSSRTAMAAMEQILQA HLPPGYDYAWSGISWQEQQTGNQAVWIVLAAVAMAWLFLVAQYESWTLPASVMLSVLFAI GGALLWLWTAGYANDVYVQIGLVLLIALAAKNAILIVEFARSRREEGLSIVDAAREGATR RFRAVMMTAVSFIIGIMPMMLATGAGAQSRRIIGTTVFSGMLVATMIGILFIPSLYVLFQ RMREWAHRRG >gi|289776635|gb|GG745509.1| GENE 368 388925 - 389644 1005 239 aa, chain - ## HITS:1 COG:yigEm KEGG:ns NR:ns ## COG: yigEm COG3698 # Protein_GI_number: 16132262 # Func_class: S Function unknown # Function: Predicted periplasmic protein # Organism: Escherichia coli K12 # 2 239 16 253 254 322 63.0 4e-88 MLLRCLLPLALLPLAAVASAACTLTDPTLTLQSYRVDAQKERIAMYWQDRHGKAWGSLRS LLAGIDGDGRVQMAMNGGIYDKAYAPLGLYIEDGKRLTPVNRSAGGGNFFIRPGGVFLVA NGRAKIVPLPAYKPSPAIRYAVQSGPMLIENGVINWRLKPSASSRKLRNGVGIDKQGRVV FMLSDRETNFYDFACYAQSKLGVRQMLYLDGTLSKMYRKGGSVPWQYHPFVTMITVERK >gi|289776635|gb|GG745509.1| GENE 369 389692 - 390807 1292 371 aa, chain - ## HITS:1 COG:ybdK KEGG:ns NR:ns ## COG: ybdK COG2170 # Protein_GI_number: 16128564 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 371 1 371 372 554 69.0 1e-158 MPLADFHRSDPFTLGIELELQVVNPPGYDLSQDASTLIADVQHQLTVGEAKHDITESMLE IATGVCRDISHAQTQLSAIQQAVQRAALRHHLQICGGGSHPFHAWQRQQISDNPRYVKTV EHFGYLAQQATVFGQHVHVGCQSGDDALYLLHGLSRFVPHFIALNAASPWFDSTDSRFAC SRLNRFSSYPDNGPMPWVADWQGFRRLFRQLSYTSMIDSMKDLHWDIRPSPQFGTVEVRV MDTPLTLAQAIHIAGFIQTLACWLLTERPFKHQPDDYLLYPFNRYQACRYGLDGTLTDVR SGEQRSIRQEILQLADRLAPFAHQLKATAALEAVVRQAKSPHSEAQQMRDFIANGGSLSG LVQKHCEIWAA >gi|289776635|gb|GG745509.1| GENE 370 391133 - 392800 2184 555 aa, chain + ## HITS:1 COG:SMb20476 KEGG:ns NR:ns ## COG: SMb20476 COG0747 # Protein_GI_number: 16264206 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Sinorhizobium meliloti # 63 554 59 521 521 179 29.0 2e-44 MHKKTLFSRAGRLAVAVSGALALAGAALPANASTLRIAMTAADIPLTLGQPDQGYEGNRF TGIPLYDALVEWDLSQGEKPSGLVPGLATEWHIDPQNTSRWIFTLRPGVRFHDGTEVNAD AIVWNVDKVLNKAAPQYAPGQIGNTLSRMPTLTGAEKIDDHTVALTTSEPDALLPYNITN LFIVSPTAWQKQYDAVPASAGDSAARSKQAWTAFAAHAVGSGPFKLEKLVPRQQLILDKN PDYWNKDRIPRVDKVVLIPLPEANARTAALLSKQVDWIEAPAPDAIDQIKSQGFHLYANT QPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRAELKSYLGGYMTEATGVYEADSPWHGKP TFQIKYDPDTARQLMTEAGYSASKPLHVTVATSASGSGQMQPLPMNEYIQQSLKSCFFNV DIKVVEWNTLFTNWRLGARDPSAKGIDAINVSAAVNDPYFGLIRFSTAKAFPPVATNWGY FSTPETEKLAAAVKHAFTPAEMNQAAGELHAALVDQVPFLFVAHDVGPRAISPAVTGVVQ PQSWFIDLSLVSKKE >gi|289776635|gb|GG745509.1| GENE 371 392819 - 393772 1273 317 aa, chain + ## HITS:1 COG:RSc1381 KEGG:ns NR:ns ## COG: RSc1381 COG0601 # Protein_GI_number: 17546100 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Ralstonia solanacearum # 1 315 1 304 307 201 37.0 1e-51 MINTLLYRILLAIPTMLGVAVICFMLVQIAPGDPLVSVMPPDASEALRQTLMQAYGFDKP LPLQFIHWLWRALHGDLGMSVATGRPVIDEVMTAVAYSLRLALLATAIGFVLGSLFGFVA GYFRNSVIDRLASVLSVFGVSVPHYWLGMLLVILCSVKFALLPATGGGPIGEVGWQWDWA HLQFMLLPALTLSVIPTGIIARTVRSQVADILSQEFIVGLRARGLNESRIFVHVMKNAAP TALAVMGLQVGYLMGGSILVETVFSWPGTGLLLNTAIFQRDLPLLQGTIWVLALFFVLLN LLVDILQTTLDPRIKRS >gi|289776635|gb|GG745509.1| GENE 372 393775 - 394668 1377 297 aa, chain + ## HITS:1 COG:BH0030 KEGG:ns NR:ns ## COG: BH0030 COG1173 # Protein_GI_number: 15612593 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 12 293 15 295 301 191 38.0 2e-48 MVDTATTKAVPAAAAHASRQGYWRGVLRRLLRDPGGVVVGVVILLLLALALFGPWLIVKD PYQTSMFLRLKPIGSDGFPLGSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGI IAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGIGNALLSLTLVFVPQVARIAE SVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE >gi|289776635|gb|GG745509.1| GENE 373 394672 - 395709 1411 345 aa, chain + ## HITS:1 COG:AGl2779 KEGG:ns NR:ns ## COG: AGl2779 COG4608 # Protein_GI_number: 15891498 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 327 3 311 311 297 50.0 2e-80 MQPFINIDLGGPAQPLLKVNHLLKYFRGGKGREVVQAVDDISFTVMKGETLGVVGESGCG KSTTARLLMQLLTQDSGELIFDGQGVGSSRLPLKAYRRQVQMVFQDSYASLNPRMTMEES IAFGQRVHGVSAREASEYARYLLAHVGLEPARFADRYPHALSGGQRQRVNIARALAMKPR LVILDEAVSALDKSVEAQVLQLLQELKRTLELTYVFISHDLHVVRWLSDRILVMYLGEVV EIGPAEQLFTASAHPYTRALLSSMPSMDPENRTLTSPLSGDPPSPIAPPSGCRFHTRCPH AKAVCAEVKPRLEAVGEGHQSACLMAQPASPWHQSIPLKEVSHVG >gi|289776635|gb|GG745509.1| GENE 374 395699 - 396709 1168 336 aa, chain + ## HITS:1 COG:DR1568 KEGG:ns NR:ns ## COG: DR1568 COG0444 # Protein_GI_number: 15806577 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Deinococcus radiodurans # 9 325 36 366 386 306 48.0 3e-83 MSDNAFVHVRDLRVVFRRDGQTINAVNGVSFDVQKGEVMALIGESGSGKSVTLRALMRLH PPGSSELSGTLQVGDDEVLTMSASQLRRYRGGRCAMIFQEPLLAFDPVYTVGQQIIEGLR RHEGLSRQAARDRALEALRQVRIPSPERRLDAYPHEMSGGMRQRAMIALALSCNPQLLLA DEPTTALDATVQIQILILLREQQKQRGLSIVFVTHDIGAAVEIADRVAVMYAGRIVEEAS MSEILRHPRHPYTQVLLGSRPKEGLKKGDALHCIPGAPPDLARLPPGCAFAERCPHRRPV CEQSLPPTESVAERHAVSCHRWRELAIDANAQALAV >gi|289776635|gb|GG745509.1| GENE 375 396807 - 398075 1838 422 aa, chain + ## HITS:1 COG:PA0444 KEGG:ns NR:ns ## COG: PA0444 COG0624 # Protein_GI_number: 15595641 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Pseudomonas aeruginosa # 13 422 10 420 427 459 56.0 1e-129 MSSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGW AREAGMSVTIDKIGNVFMRREGRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRT LNDLQIDTDAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFPLEETWAVTDKEGVSVGEALA QIGYIGEQTPGEHPIGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAG PTPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRN LSDALVDEMDRQLRAFIAEVERESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPA RPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYASPEHVVAGTNVLLQVMLQYAR PV >gi|289776635|gb|GG745509.1| GENE 376 398179 - 399087 959 302 aa, chain - ## HITS:1 COG:mll1137 KEGG:ns NR:ns ## COG: mll1137 COG0697 # Protein_GI_number: 13471225 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Mesorhizobium loti # 10 291 10 291 291 328 69.0 6e-90 MDKSEPGPWSGWLHGLLGVIIFSGSLPATRLAVQDMDPFLLTFLRASIAGLLAVALLVGF RQKRPRLAQLVPLIIVSSGVVIGFPLLTALALQHITSAHSIVFIGLLPLMTALFGVLRGG ERPRRAFWIFSLLGSLLVVGFALTQSAAASLSGDLLMLAAVIACGLGYAEGAKLTRELGG WQVICWALVIALPLMLPASLMVQPASWHAISASSWAALGYVSLFSMLIGFIFWYKGLAAG GIAAVGQLQLLQPFFGLGLSAALLHETVSPLMLAVTLGVVLCVVGSRKFGRQRVSAGSGS RD >gi|289776635|gb|GG745509.1| GENE 377 399211 - 400545 1412 444 aa, chain + ## HITS:1 COG:PA2100 KEGG:ns NR:ns ## COG: PA2100 COG1167 # Protein_GI_number: 15597296 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pseudomonas aeruginosa # 4 423 24 448 477 216 32.0 5e-56 MKARYKAVVDRYAQAIRSGQLPAGTRLPTHRTLAAGERISLATATRVYRELEEMGLVSGE TGRGTFVRDLSLPPGHGVDQQVVAADVVDLNFNYPSLPEQGDALREALRQLAMAGDIDSH LRYQPHAGRLAEREIIARHLTCQHFTPDAENVLIVNGAQHGLAVTVMGLLRPGDVVAVDA LTYSGFKVLAALYHLELAAIPCRPEGPDLQALHTLCQQRRVRAVYTMPTLHNPLGWVLNT GQRQALADLARQHDLLIIEDAAYARLVSRPPPPVISYAPERTVYVTGFSKNIATGLRVGV VISPPRYRPEIERAIRATTWNTPTLISSLICAWIEDGTVARFEMQKRQDARQRQQVAREV LCGLPVVSHPDSYFVWLPLGEESRADRLANALMERRISVSTAEPFCVSATIPQALRIALG SVPFDSLRPALLSVRDAVGYEQYR >gi|289776635|gb|GG745509.1| GENE 378 400542 - 402005 1914 487 aa, chain - ## HITS:1 COG:mll5410 KEGG:ns NR:ns ## COG: mll5410 COG1167 # Protein_GI_number: 13474511 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mesorhizobium loti # 5 479 13 486 497 356 42.0 6e-98 MIRHLLHVDFQPGRGLQEQVRETLVNAILSGIFAADTPLPSCRQLASQLRVSRNTTALVF ESLVNEGYLISRPRSGYYLHPDYHEASPAAVESAPQREAAAPRWGDRLQMTPSQQESILK PAGWMHYRYPFIYGQPDTRQFPLATWRSAANWLHGGVRDPAWVIDHIDQDVPMLIEQIRT RVLPKRGIVAAPDEILITLGSQNALYLLTRLLLSSTTRIGVENPCFREAINTFLLADAEV VPHPVDEEGIVLNERPCDYYYVTPGHQVPTGVTMSSARRRQLLEHAARHDAVIIEDDYDS ESNFTLNPLPALKASDRSGRVVYVSSLSKALSPGLRLGFMVADPDLIDEARALRRLVYRH PPTNIQYQMAHFLAQGHYETHLRRYHYDSAQRWERLHAALQRYLPSCRALAGSEHANAFW LQTPAQINTQQLTWRAAHAGVLIEPGARHFLSAAPPDNYFRMGFHAINPDAIAQGVEVLR GQLEQMG >gi|289776635|gb|GG745509.1| GENE 379 402247 - 403098 994 283 aa, chain + ## HITS:1 COG:PA0314 KEGG:ns NR:ns ## COG: PA0314 COG0834 # Protein_GI_number: 15595511 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Pseudomonas aeruginosa # 22 260 18 248 256 113 30.0 4e-25 MKKSLASMCLSAVLTVAFSYHAVAADLPEIEKSGTLKVATEDDYAPFNFMNNGQADGFNK DMLEELRKYAKFHVDQSILPWTGLLAAVSTGQYDMALTGAVITDERLKVFDFTPPWASAQ HYFVKRAGDTSLNTIADLSGKKVGLQAGSALLARLPELKAMLEKTGGKLGPVVEYPSYPE AYADLANKRLDYVINVVISVNDLAKAKPKVFAKGLAVSGPGYMAWPIPKNSPQLLAYMTK FMNHMKETGKLAELQKKWFGETYDNLPTEAITSPEQFHKLAGL >gi|289776635|gb|GG745509.1| GENE 380 403146 - 403787 1002 213 aa, chain + ## HITS:1 COG:BH1462 KEGG:ns NR:ns ## COG: BH1462 COG0765 # Protein_GI_number: 15614025 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Bacillus halodurans # 8 210 14 216 218 116 34.0 3e-26 MDAISWQLLIEGAWTTLWISAIAIAFGVVAGLLIALVRMLRLPVIDQLLVVYISLARATP LVTLVLFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRNAFRTFPREQREAAESVG MRRWTYFRYIMLPQMWIESLPALVNEMSFLIKGSPAIAVIGVVDLTRVTNRISSVTYEPL SPILAAGLLYVVIIGCLLKLQGIAERKARRLAR >gi|289776635|gb|GG745509.1| GENE 381 403802 - 404467 779 221 aa, chain + ## HITS:1 COG:SMa0079 KEGG:ns NR:ns ## COG: SMa0079 COG0765 # Protein_GI_number: 16262492 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Sinorhizobium meliloti # 12 200 14 202 222 101 29.0 9e-22 MNQWGVIWSVRDSFIAGLFATLELFITAALAALIIGIALCYFSEYQKKMINRIIIGFVSL MRAIPFLILAYLLYYGLPQLGISMEPWTAGLLALIIYHGAYFFEILRSQRRVFSGGYIEA AIAQGFSRYAIFRRIILPNIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQAT YFIPFNAFIVAIGLYWAISILLELLIKRLTAWGAKRGMSHA >gi|289776635|gb|GG745509.1| GENE 382 404460 - 405221 239 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 1 229 1 223 312 96 28 2e-18 MPESIAVSVKNVSKQFDNVEVLRDINLTVEKGTVVSILGSSGSGKSTLLRCMNWLEQPDR GEIHIGGQRLGIDEQRGRAMSHRQLAKIRERVGMVFQSFNLWPHLTVQQNVSEALLHVKG MKRDEAKAIAMQQLEKVGMAHKADVYPITLSGGQKQRVAIARSLAMSPEVILFDEPTSAL DPELVNEVLGVMKALAAEGYTMVVVTHEMDFARQVSNEVVFLEKGLLIEKAPPEKFFTQP DSERVRQFLQSSR >gi|289776635|gb|GG745509.1| GENE 383 405275 - 406039 1135 254 aa, chain - ## HITS:1 COG:PA4907 KEGG:ns NR:ns ## COG: PA4907 COG4221 # Protein_GI_number: 15600100 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Pseudomonas aeruginosa # 4 254 2 252 253 316 62.0 3e-86 MATSNVVFITGATSGFGEAAAQVFADAGWSLVLSGRRYPRLKALQDRLAAQVPVHIIELD VRDSEAVAAAVASLPAPFADVTTLINNAGLALSPLPAQEVALEDWKTMIDTNVTGLVTMT HALLPTLIRHGAGASIINIGSIAGQWPYPGSHVYGASKAFVKQFSYNLRCDLLGTGVRVT DLAPGIAETEFTLVRTKGDQAASDKLYRGTTPLSARDIAEQMFYIATLPAHMNINRVEVM PVRQAWQPFAIDRD >gi|289776635|gb|GG745509.1| GENE 384 406220 - 407557 1812 445 aa, chain + ## HITS:1 COG:Cgl2387 KEGG:ns NR:ns ## COG: Cgl2387 COG0160 # Protein_GI_number: 19553637 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Corynebacterium glutamicum # 20 426 32 433 456 368 47.0 1e-101 MKLALQNEVAVSNDEVRQLDRAYVFHSWSMQGNLHPLVIAGAQGCELWDYEGNTWLDFSS QLVNVNIGYQHPRVLAAMKAQLETLVTIAPATANLARGEAAKRIVDLAPAGFSKVFFTNA GADANENAIRMARLYTGRDKVLSAYRSYHGNTGSAIAATGDWRRVPNEFSRGHVHFFNPY LYRSEFNAATEEEECQRALAHLRRIIECEGPTAIAAILLESIPGTAGILVPPAGYMQGVR ALADEFGIVLILDEVMAGFGRTGSWFAFEQDGVVPDLVTFAKGVNAGYVPAGGVLISEPI ARYFDDHFFAGGLTYSGHPLAMAAIVATIDAMKEEKVVENAAYIGNEVLRPGLEALAEKH AIIGEVRGRGLFQALELVSSREQKTPLTAADMAAIKGALTEAGLLAFVVENRIHVVPPCT ITAEQVAQGLAIFDAVFARFASLAK >gi|289776635|gb|GG745509.1| GENE 385 408812 - 409516 420 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 14 231 33 255 329 166 42 2e-39 MAIVNLQDLQVTFGAKTAVSAASFCVDAGETFSLIGASGCGKSTILRVLAGLQREWRGSV ELLGQGIAPGARFQGALRRNVQMVFQDPYASLHPNHTLWRTLAEPLQIHGIRDVAPRVTT ALEQVGLAADAVRRYPHQLSGGQRQRVAIARALLLRPQILLLDEPTSALDMSVQAEILNL LNRLKQEHGMTYLLVSHDADVIAHMSDRAAFMAEGVIQRFFDREALVNGEHRMR >gi|289776635|gb|GG745509.1| GENE 386 409503 - 410339 324 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 252 36 266 329 129 37 3e-28 MTDIRLTVQGLAVDYPTARVVDNVSFTLGNERLALVGESGSGKSMTARALMGLVRKPGVV SAERLEVLGRDVLTLSARGWRALRGNDIAMVLQDPRYALNPVQSIQTQLEEALTLHQRLS RRGRAEAVKDAIAAVGLDLPVLSRYPGELSGGMGQRVMIALALLNNPKVLIADEPTSALD ARLRNQILELLVEQCAQRQMAMLLISHDLPLVAAHCDRVLVMYRGRQVDEMPARALPSAT HPYTRTLWTCRPNAHTYGQMLPTLDRTQDFTETAHGDR >gi|289776635|gb|GG745509.1| GENE 387 410332 - 411165 1351 277 aa, chain - ## HITS:1 COG:YPO3451 KEGG:ns NR:ns ## COG: YPO3451 COG1173 # Protein_GI_number: 16123597 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Yersinia pestis # 1 277 1 278 278 373 82.0 1e-103 MPTYLFLRRLRRSPAAFSGLTLVILLVLTALFAPWLAPHDPNWQDAAARLQGPGAGHWLG TDSYGRDLLSRLLYGTRPALGLVALVTAITLPVGLLVGILSGYYGGWLERILMRFTDVVM SMPRLILAFAFVAMLGPGLVNGALALALTTWPAYARQARSEIQRLRHSDYLAAAEMLGIR GWRLLIGHILPLCLPSAIVRLALDLAGIILAAAGLGFLGLGARPPMAEWGAMIADGMQVI FDQWWIAAIPGAAILLASLAFNLLGDGLRDILEPQHD >gi|289776635|gb|GG745509.1| GENE 388 411165 - 412187 349 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 18 337 2 310 320 139 31 4e-31 MPSFSTHLTRLLQGLLTLLLTLFGLLLVTFSLSALSPVDRVLQIVGDHASQSTYDQVRHQ LGLDQPLPVQFWHYLVNLAHGDLGIASATGQPVLHDLLAVFPATLELATLALIVGAVLGI VAGVLCARYAGSPWDLAVRTFTLLGNSVPIFWLGLLMLALFYARLQWAPGPGRLDDIYQY TVEPRSGFALIDTWLSGDTAAFKNAIGHLALPVLVLAYYSLASITRLTRSACLSEMNKEY ILLARAKGAGEMTILLRHVLPNIRGTLLTVTALAWTSMLEGAVLTETVFSWPGIGRYLTT ALFAGDTTAIMGGTLLIGVSFVLINNLTDLLVRLTDPRVR >gi|289776635|gb|GG745509.1| GENE 389 412308 - 413876 2460 522 aa, chain - ## HITS:1 COG:SMc01525 KEGG:ns NR:ns ## COG: SMc01525 COG0747 # Protein_GI_number: 15966166 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Sinorhizobium meliloti # 18 522 28 545 546 362 40.0 1e-100 MTKKLLPLLVLTALTAAAHAATPPNTLVVAQGLDDIVSLDPAEANELSSIQTVPSLYQRL VQPDRNNPEKIVPILAESWQADPAAKTLTIKLKPDAKFASGNPLRPEDVIFSYTRAVTLN KSPAFILNVLGWQPDNIASQLKKIDDHTLTLHWTADVSPAVALNILSTPIASIVDEKQVA PNAKNNDFGNDWLKMHSAGSGAYKMRVYQPHQAIVLEANASSPTGAPKIKSIIIKNVPDP ASRRLLIQQGDADVARDLGADQIAALQDKPGVKVLSIPSAEQNYLVFNTANSANPLLNNP AFWEAARWLVDYEGITKNLLKGQYFIHQSFLPAGLPGALETNPFTFDPQKAKAILDKAGI KDAHFTLDVENKPPFITIAQSLQASFAQGGVKVDLLPAAGSQVYARVRAKQHQAAIRLWI PDYFDAHSNASAFAWNDGKSSTVAGLNGWQIPELNKATLAAVAEPDPAKRLDLYKTMQES LLQHSPYVFIDQGKTQIVVRDNVKGYQQGLNADMVWYDNVTK >gi|289776635|gb|GG745509.1| GENE 390 414082 - 414777 445 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein [Yersinia intermedia ATCC 29909] # 3 230 3 231 237 176 40 3e-42 MPEINEFGQQVNDLVPGWQGAQVLRRTALNGRFCRLEPLDVDRHAADLFAAYALGDNSDW TWLASTRPESVAATAHWIAGKVNDDALVPYAVVDLRSEQAVGIVSYMAIEREMGTVEIGH VTWSRRMKNTPLGTEAVWLLLKNGFDHGYRRLEWKCDSMNVASRRAAERLGFSWEGRLRQ RLVRKGRTRDSDMLSIIDGEWPARDAALRAWLAAENFTADGQQIKRLEAFR >gi|289776635|gb|GG745509.1| GENE 391 414898 - 416562 2122 554 aa, chain - ## HITS:1 COG:ECs0357 KEGG:ns NR:ns ## COG: ECs0357 COG2303 # Protein_GI_number: 15829611 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Escherichia coli O157:H7 # 1 553 1 553 562 1086 92.0 0 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY NWAYETEPEPYMNHRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSYLD CLPYYRKAETRDIGPNDYHGGDGPVSVTTPKPGNNPLFEAMVTAGVQAGYPRTDDLNGYQ QEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIFAGKRAVGVEWLEG ESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLPGVGENLQDHL EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFIRSRAEFAWPNI QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDPHAHPAILFNYMSHEQD WQEFRDAIRITREIMNQPALDKYRGREISPGTECQSDAELDEFVRNHAETAFHPCGTCKM GYDEMAVVDGEGRVHGLEGVRVVDASIMPQIITGNLNATTIMIGEKMADAIRGRQPLPRS TAAYYVAGDAPVRR >gi|289776635|gb|GG745509.1| GENE 392 416576 - 418048 1795 490 aa, chain - ## HITS:1 COG:betB KEGG:ns NR:ns ## COG: betB COG1012 # Protein_GI_number: 16128297 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 490 1 490 490 865 89.0 0 MSRMAEQQLYINGGYTSATSGRTFETINPATGEVLATVQAAGREDVDRAVESAQRGQKIW AAMTAMERSRILRRAVDLLRQRNDELARLETLDTGKPLSETAAVDIVTGADVLEYYAGLI PALEGSQIPLRDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV TPLTALKLAEIYSEAGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMAN SAASSLKEVTMELGGKSPLIIADDADLDLAADIAMMANFYSSGQVCTNGTRVFVPAKRKA EFEHKILERVGRIRPGDLFADDTNFGPLVSFPHRDNVLRYIESGKREGARLLCGGEALKG DGFDNGAWVAPTVFTDCNDEMTIVREEIFGPVMSILSYTDEAEVIRRANATEYGLAAGVV TPNLNRAHRLIHQLEAGICWINSWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ VEMGKFQSIF >gi|289776635|gb|GG745509.1| GENE 393 418062 - 418667 664 201 aa, chain - ## HITS:1 COG:betI KEGG:ns NR:ns ## COG: betI COG1309 # Protein_GI_number: 16128298 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 7 199 1 193 195 340 94.0 8e-94 MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKN GLLEATMRDITSQLRDAVLNRLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWA SSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKP LDKTLAQSLTSHFIRQHLPNP >gi|289776635|gb|GG745509.1| GENE 394 418778 - 420811 2949 677 aa, chain + ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 1 677 1 677 677 1296 96.0 0 MTDLSQNREKDKINPVVFYTSAGLILLFSLMTIFFRDFSAEWIGRTLNWVSKTFGWYYLL AATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQ YMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYP IFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSLAAKAALIAL SVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFM GMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFT FTLLWLSVFGNSALYEIIHGDAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLF YVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVI MGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPMGLQDRLSWKKRLSRLMNYPGT RYTKQMMETVCYPAMEEVAQELRLRGAAVELKSLPPEEGENLGHLDLLVHMGDEQNFIYK IWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNF IHLHREAPGNSVMFPDG >gi|289776635|gb|GG745509.1| GENE 395 420858 - 421304 646 148 aa, chain - ## HITS:1 COG:no KEGG:KP1_1532 NR:ns ## KEGG: KP1_1532 # Name: ykfE # Def: C-lysozyme inhibitor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 147 28 174 175 277 97.0 1e-73 MFKALTAIITLAASASVMAQGDVTLNSLAHDAATRASFNQMVKGHQLPAWVTTGGTGSPA QTVKLGSESWQVLSACKPHDCGHERIAVIWSEKSQQMSGVYSVVDEKTDQEKLTWLNVSD ALSIDGKTVLFAALSGSLDNHPDAFNYP >gi|289776635|gb|GG745509.1| GENE 396 421529 - 422785 1479 418 aa, chain + ## HITS:1 COG:XF0437 KEGG:ns NR:ns ## COG: XF0437 COG0668 # Protein_GI_number: 15837039 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Xylella fastidiosa 9a5c # 6 392 53 446 472 260 37.0 3e-69 MAYVNHLLTFIESNPALAVGFNLILLLVSGIFAHLLCKFLLIKVVRKVFFSSHKQDVPLE KDRRIAEKLSNFIPVIIVYYVLQFMPAMPASLVTAINTICGILFFIFMSVFFNEMLDIVN SSYLRKTKRKNHSIKGYIQIGKILVHILAAIMILAVMSNKSPIIIISSLGAVAAVLMIVF QHTLLSLVANVQLSSNDVLQLGDWIEMPDKNLSGEVTDIALHTITIRNWDNTISRIPTKN FLTETYTNWQAMFSSGARRIMRSIAIDQHSVRFLDQEMLSSMLTIRGVSEPLGTLLDGRD PGGVADRWFVDNGLTNLTLFRHYLMHYLAERPDIIKEMYIVARTLKPSPSGIPLEIYCFT SSTLWKDYENTQSAIFEYITAVAGQFSLRLYQYPAGHDFWRLSQEHAARTGLPPSAEG >gi|289776635|gb|GG745509.1| GENE 397 422782 - 423675 1206 297 aa, chain - ## HITS:1 COG:PA3845 KEGG:ns NR:ns ## COG: PA3845 COG0583 # Protein_GI_number: 15599040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 287 1 285 298 295 56.0 9e-80 MADFPPVASLRSFEAVARLGSVTQAAHELSVTHSAVSQHIKQLEALVGVTLFIRHGRGVR ITEEGRLYALQIREALQHIADATRMVQIKPRTLEVTLATLPSFGCHWLLPRLARFQARHP QIAVRLLTSLAVVNLQQEGIDLAIRMGQGDWEGMESRHLFADEQLVVAAPHYRSGDLPTT PQAIAASDIIFSMESWNAWCSQAGLEKPIVPAGLRLNDSNLVLEAVRLGAGVALERRSLV AGAIARGELVQLTAVTVPYPWHYWLTLSPQAENRPEVARFIAWLEEEIALWRQQISA >gi|289776635|gb|GG745509.1| GENE 398 423929 - 424534 713 201 aa, chain + ## HITS:1 COG:RSc0129 KEGG:ns NR:ns ## COG: RSc0129 COG0625 # Protein_GI_number: 17544848 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Ralstonia solanacearum # 1 200 1 201 202 176 52.0 3e-44 MKLIGMMDSPYVRRVAVSLALYGVEFESLPLSVFSGFDEFSRINPVVKAPTVVFDNGTQL MDSTLILHYFETTNPTGRRLLPAHPEALARDLHLLGVILAASEKAVQHVYEHRLRPEEKQ HQPWIARVTGQLLAACREWDARLADRAAAAQPDQVLVTSTVVWSFIQLMIPAVVSAAAFP HIRALAEKGEALPVFQQYPLV >gi|289776635|gb|GG745509.1| GENE 399 424587 - 425372 1048 261 aa, chain - ## HITS:1 COG:AGc3482 KEGG:ns NR:ns ## COG: AGc3482 COG1028 # Protein_GI_number: 15889193 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 261 8 262 262 316 65.0 3e-86 MIGKDFAQQLFNLQGRVAFVTGAGSGIGQTIACSLASAGARVVCFDLRDDGGLAETVSHI ESIGGQACSYTGDVRQIADLRAAVALAKNRFGRLDIAVNAAGIANANPALEMESEQWQRV IDINLTGVWNSCKAEAELMLESGGGSIINIASMSGIIVNRGLDQAHYNCSKAGVIHLSKS LAMEWVGKGVRVNSISPGYTATPMNTRPEMVHQTREFESQTPMQRMAKVEEIAGPALFLA SDAASFCTGVDLVVDGGFVCW >gi|289776635|gb|GG745509.1| GENE 400 425574 - 426371 198 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 260 2 238 242 80 27 1e-13 MQRDFQNKTVVITGACRGIGAGIAERFAHDGANLVMVSNAERVHETAETLRQRYQADILS LQVDVTDEAQVQSLYEQAAARFGTIDVSIQNAGVITIDYYDRMPKADFEKVLAVNTTGVW LCCREAAKYMVKQNHGSLINTSSGQGRQGFIYTPHYAASKMGVIGITQSLAHELAPWNIT VNAFCPGIIESEMWDYNDRVWGEILSTEQKRYGKGELMAEWVEGIPMKRAGKPEDVAGLV AFLASDDARYLTGQTINIDGGLIMS >gi|289776635|gb|GG745509.1| GENE 401 426432 - 427499 1882 355 aa, chain - ## HITS:1 COG:mll7011 KEGG:ns NR:ns ## COG: mll7011 COG1172 # Protein_GI_number: 13475840 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 12 338 1 327 332 306 57.0 4e-83 MNQKYMIYMYLLKARTFIALLLVIAFFSVMVPNFLTASNLLIMTQHVAITGLLAIGMTLV ILTGGIDLSVGAVAGICGMVAGALLTNGLPLWNGDILFFNVPEVILCVAIFGVLVGLVNG AVITRFGVAPFICTLGMMYVARGSALLFNDGGTYPNLNGMEALGNTGFATLGSGTLLGVY LPIWLMIGFLVLGYWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCAAF VGLIVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMV MMGVSDFWQMVIKGVVIVTAVVVDQFQQKLQSKVILMRRHEEKLAAIPPNGATSS >gi|289776635|gb|GG745509.1| GENE 402 427517 - 429061 175 514 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 285 492 17 217 245 72 25 6e-11 MAPHDLVAPQPVESEVIIETRGLSRVYPGVTALDNVNYRVYRNKVNVLIGENGAGKSTMM KMLAGVETPSSGQIILDGEAVSLQSTHQAEKLGISIIFQELNLFPNMNVMDNIFMANEFF QKGRINEKYQYALAKSLLERLELDVDPYAPLGELGIGHQQLVEIARALSKDTRVLIMDEP TSALSQSEVKVLFKVIAQLKRRGVTIIYISHRLEELMEIGDNITIFRDGRFISERHVSDA SVPWIIEQMVGDKKKHFDYQPAPKGDAVLDVKGLTALHPSGGYKLNDVTFTLSKGEVIGI YGLLGAGRTELFKGLVGLMPCQRGEVHLNGESIGKSRFQQRLKKGLALVPEDRQGEGVVQ MMSIQANMTLSDFSLQGFRRAWRWLNPQKEESCVKEMIQQLAIKVSDATLPITSLSGGNQ QKVVLGKALMTQPQVVFLDEPTRGIDVGAKTDVYHLIGKMAQQGLAVMFSSSELDEVMAL ADRILVMADGRITADLPRHAVTREQLIAASTPQD >gi|289776635|gb|GG745509.1| GENE 403 429063 - 429683 835 206 aa, chain - ## HITS:1 COG:mll7013 KEGG:ns NR:ns ## COG: mll7013 COG5618 # Protein_GI_number: 13475842 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Mesorhizobium loti # 10 199 20 214 221 75 29.0 7e-14 MFKKTCLTLAVLALGGCRIVSQQELADLKSPPNPHMANMDKTWQQSIVPQVVTKARPAAE LMSALKAAKDIDSACKTLGYRAQDENPCIFYVKVSGTVSKLDTASRSGKMTLSDASVGKV TVQIGPTLRGTQLRDGYSGASYQDFNDQVLFGEYSKNINSQAVKMIQTANVKTGDSVEVY GVFSAWDIPQTLPEITPAKIIHAGGQ >gi|289776635|gb|GG745509.1| GENE 404 429727 - 430662 1401 311 aa, chain - ## HITS:1 COG:SMb20349 KEGG:ns NR:ns ## COG: SMb20349 COG1879 # Protein_GI_number: 16264083 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 2 307 6 309 313 242 47.0 5e-64 MKLRITLLTAATLTAFSFAAHAAEKGTIMIMVNSLDNPYYASEAKGASEKAQALGYKTTV LSHGEDVKKQNELIDTAIGKKVQGIILDNADSTASVAAIEKAKKAGIPVVLINREIPVDD VALEQITHNNFQAGSEVANVFVEKMAEKGKYAELTCNLADNNCVTRSKSFHQVIDQYPDM VSVAKQDAKGTLIDGKRIMDSILQAHPDVKGVICGNGPVALGAIAALKAANRSDVIVVGI DGSNDERDAVKAGTLQATVMLQAQAIAAQGVTDLDNYLQKGEKPAKQRVMFRGILITQDN ADKVQDFNIKS >gi|289776635|gb|GG745509.1| GENE 405 430822 - 432342 1863 506 aa, chain - ## HITS:1 COG:YPO3312 KEGG:ns NR:ns ## COG: YPO3312 COG0554 # Protein_GI_number: 16123465 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Yersinia pestis # 9 502 6 494 495 408 45.0 1e-113 MQATAKEFIIALDEGTTNAKAVVLDSRGKVIVKFSQPLAIQTPRDGWVEQSGEALVTASL AVIASAVAHVGAENVAALAISNQRETAIGWYRDSGEPINAAITWQCTRSAAFCDKLRHDR QEQHIKRATGLPIAPLFSASKMRWLLDATVDGHLRAERGEICLGTIDSWLLWNLTAGEAF CCDYSNAARTQLLNLHRGEWDDEMLTLFGIPRAALPDIKPSSGLFGHTKGLAAIPDGIPI MAMIGDSHAALFGHALGEAGCVKATYGTGSSVMAPVKSAQCDIDALATTVAWHDGDQLVW GLEGNIPHTGDAVAWMADSTGLSELSAAELAHELNTLPASVDSTLGVYFVPALTGLGAPW WDDSARGVICGLSRGVKRAHLIRAALESITYQIADVVVAMRQHEEFTLTALMVDGGPTNN DWLMQYQADLLGCPVMRSDVPELSAIGAALLARKALHPGSTADLQAFLTEHSTFQPDMAR HQRLQTRWQEWRHAVDRTLWKPDSPA >gi|289776635|gb|GG745509.1| GENE 406 432692 - 433642 1324 316 aa, chain - ## HITS:1 COG:YPO3310 KEGG:ns NR:ns ## COG: YPO3310 COG2390 # Protein_GI_number: 16123463 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Yersinia pestis # 1 314 1 314 314 436 69.0 1e-122 MAKQDEQRLLVKIATLYYLEGRKQSDIAQLLSLSQSFVSRAITRCQKEGVVKISVVQPSN IFLKLEKGLEDRYGLKQAVVVDTEEEASDHTIKRAIGSAAAHYLETRLRPKDLIGVSSWS STIRAMVDEVHAQNLKASGVIQLLGGVGPNGNVQATILTQTLAQRLNCDAWLLPSQSIEG SMEERNRLLASKDVADVVSRFDEVDIAIVGIGILEPSQLLKTSGNYYHEDMLQVLAARGA VGDICLHYYDKNGHPVLRDDEDPVIGMALEKVKKCPNVVALAGGTDKVAAIKGALTGGYI DVLITDYPTARMLVSD >gi|289776635|gb|GG745509.1| GENE 407 434017 - 434847 1015 276 aa, chain + ## HITS:1 COG:YPO3314 KEGG:ns NR:ns ## COG: YPO3314 COG3959 # Protein_GI_number: 16123467 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Yersinia pestis # 1 276 1 276 276 442 80.0 1e-124 MNPYRYDIQTLERKARAVRRHIVRLNANSPAGGHTGADLSQVELLTALYFRVLNVAPDRL DDPQRDIYIQSKGHAVGCYYCVLAEAGFFPVEWLETYQHANSHLPGHPVRQKTPGIELNT GALGHGLPVAVGLALAAKKSNSTRRIFLITGDGELAEGSNWEAALAAAHYGLDNLVIIND KNNLQLAGPTREIMNTDPLADKWRAFGMEVSECQGNDMASVVAAIEGLQQNGKPNVIIAN TTKGAGISFIQGRPEWHHRVPKGEEIALALEELKDE >gi|289776635|gb|GG745509.1| GENE 408 434840 - 435775 1236 311 aa, chain + ## HITS:1 COG:YPO3313 KEGG:ns NR:ns ## COG: YPO3313 COG3958 # Protein_GI_number: 16123466 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Yersinia pestis # 1 305 1 305 314 447 75.0 1e-126 MSNTEHLANVMVEAFIAAVESGVDLVPVVADSTSTAKIAPFIKQFPGRLVNVGIAEQSMV GTAAGLALGGKVAVTCNAAPFLISRANEQIKVDVCYNNTNVKLFGLNAGASYGPLASTHH AIDDLAVMRGFGNIQIFAPSTPRECRQIIDYALAYQGPVYIRLDGKALPELLDESYRFVP GAVLTLREGEDVALVATGSTVHEVVEAAQQLADLGIQAKVVSVPSIRPCDTAALLAALRP CGSVITVEEHNVNGGLGSLVAEVLAEAGVGIALQRLGIPDGEYAAAADRGWMRQYHGFDA AAIVALVQKRD >gi|289776635|gb|GG745509.1| GENE 409 435810 - 436439 597 209 aa, chain - ## HITS:1 COG:ECs0622 KEGG:ns NR:ns ## COG: ECs0622 COG2977 # Protein_GI_number: 15829876 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Escherichia coli O157:H7 # 1 205 4 206 209 209 53.0 2e-54 MRHHRTALPLAGYTIQQVEFDPATFQPEDLFWLPYHASLSGWGRKRQAEHLAGRIAAVYA LREVGEKQPPAISDQRQPLWPTPWFGSISHCGQRALAVIADRPVGVDIERRFTPQMAAEL ESSIISPAEKTALLRSGLPFPLALTLAFSAKESGFKATPAANQCALGFADFQIVDITAST LALEFAEQRYPLHWIASEEQVITLCALQQ >gi|289776635|gb|GG745509.1| GENE 410 436506 - 438734 3467 742 aa, chain - ## HITS:1 COG:STM0585 KEGG:ns NR:ns ## COG: STM0585 COG4771 # Protein_GI_number: 16763962 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 1 742 1 751 751 1184 82.0 0 MNNRIKSLALLVNLGIYGVAFPLSAAETATDDKNSAAEETMVVTAAEQNLQAPGVSTITA DEIRKRPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTS RNSVRLGWRGERDTRGDTSWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKTGDEW HGSWNTYMNAPEHKDEGSTKRTNFSLSGPLGGDFSFRLFGNLDKTQADAWDINQGHQSER TGIYADTLPAGREGVQNKNIDGLVRWEFAPMQSLEFEAGYSRQGNLYAGDTQNTNSNDLV KENYGKETNRLYRNTYSVTWNGAWDNGVTTSNWAQYERTRNSRKGEGLAGGTEGIFNSNQ FTDIDLADVMLHSEVSIPFDYLVNQNLTLGSEWNQQRMKDNASNTQALSGGTIPGYDSTG RSPYSQAEIFSLFAENNMELTDTTMLTPALRFDHHSIVGNNWSPSLNLSQGLWDDFTLKM GIARAYKAPSLYQTNPNYILYSKGQGCYASKDGCYLQGNEDLKAETSINKEIGLEFKRDG WLAGVTWFRNDYRNKIEAGYAPVYQNNKGTDLYQWENVPKAVVEGLEGTLNVPVSETVNW TNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVRDDVSLQSTFTWYGKQEPKKYNYKG QPVTGSEKNEVSPYSILGLSATWDVTKYVSLTGGVDNVFDKRHWRAGNAQTTGGATGTMY GAGAETYNESGRTWYLSVNTHF >gi|289776635|gb|GG745509.1| GENE 411 438994 - 440202 1082 402 aa, chain + ## HITS:1 COG:STM0586 KEGG:ns NR:ns ## COG: STM0586 COG2382 # Protein_GI_number: 16763963 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Salmonella typhimurium LT2 # 2 399 5 401 404 504 66.0 1e-142 MLRTGSEEWWQTLQGPQCRAVDGAIEVTFWWRDPAGDETHSPRRRVWLYITGVTDHHQNA RPQSLTRLPGTDAWSWRTTLSPTWRGSYCFIPSDRDDDFSPEVFSADAPDRALLREGWRK LLPRAIADPLNPHSWQGGRGHGVSALEMPQAPAQPGWDQFNEAHPPARCLEWRSARLGNH RRVWIYTTGEAVDPQTRPLAILLDGQFWAESMPVWSPLAALTREERLPPAVYLLIDAIDN QRRGVELPCHRDFWLAVQEELLPLIRGHAPFSDRPERTVVAGQSFGGLAAMFAALNWPQR FGCVLSQSGSYWWPHRDGRGTGFIGEQLRQGEVSAAGLRIWLEAGQREPIIFRANQALLA QLTMTQQTIFWRQVDGGHDALCWRGGLTAGLIQLWQPLLSHP >gi|289776635|gb|GG745509.1| GENE 412 440230 - 440433 354 67 aa, chain + ## HITS:1 COG:STM0587 KEGG:ns NR:ns ## COG: STM0587 COG3251 # Protein_GI_number: 16763964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 66 1 66 72 89 71.0 2e-18 MQFSNPFDNPQGQFYILRNDQQQYSLWPAHCDLPAGWAVVCPPQSAEACNAWLAANWSTL TPAHHAS >gi|289776635|gb|GG745509.1| GENE 413 440444 - 444325 5305 1293 aa, chain + ## HITS:1 COG:STM0588_1 KEGG:ns NR:ns ## COG: STM0588_1 COG1020 # Protein_GI_number: 16763965 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Salmonella typhimurium LT2 # 1 1061 1 1061 1061 1593 77.0 0 MTTRLPLVAAQPGIWMAERLSTLPGAWSVAHYVELRGALDPTLLGKAIVAGLQQADTLSL RFEEEEGEVWQWVAADRTFGEPSIIDLRTAPDPHRAATERMQADLAQDLRVDGGNPLVCH QLLRVGDDRWYWYQRYHHLLVDGFSFPAITRQIAAIYRAWQRGEATPESPFTPFAEVVDE YQRYAGSEAWQRDKAFWQAQRQALPSPASLSAAPLGGRAAGSDIWRMKLEMNADAFRRLA GHAPQCQPADLALALTTLWLGRLCNRMDYAAGFIFMRRMGSAALTSTGPVLNVLPLAVHI DAQETLADLAMRLAAQLKKMRRHQRYDAEQIVRDSGKAAGDEPLFGPVLNVKVFDYQLDI DGVQALTHTLATGPVNDLELALFPDETGGLSLEILANKARYDEAELRRHVARLTALLAQF AADPALRCGEAEMLSANELARLAAVNDTAVPLPATTLSALVADQARKTPDAPALADARWQ FSYREMRQQVVALAQLLRQRGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYP DDRLRMMLEDARPSLLITSEDQLARFSDIPGLESLCYQQPLAAGDDAPLALSKPDHTAYI IFTSGSTGRPKGVMVGQTAIVNRLLWMQDRYPLSAQDVVAQKTPCSFDVSVWEFWWPFIA GAQLVMAEPEAHRDPQAMQQFFARYGVTTTHFVPSMLAAFVASLDADSVAACRTLRRVFC SGEALPTELCREWERLTGAPLHNLYGPTEAAVDVSWYPACGSELAAVTGSSVPIGWPVWN TGLRILDAAMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDV ARWLTNGAVEYLGRSDDQLKIRGQRIELGEIDRVMSALPDVAQAVSHACVFNQAVATGGD ARQLVGYLVSDSGLPLDTAALKARLAEQLPPHMVPVVLMQLADLPLSANGKLDRKALPLP TLGGERSGRPPEPGMETLVATAFSQLLGCEVNDIDADFFALGGHSLLAMRLAAQLSRQLA RQVTPGQVMVASTVGKLSALLAADLSDEQARRLGLDTLLPLRESDGPTLFCFHPASGFAW QFSVLARYLSPRWSITGIQSPRPQGPMASAASLDEVCEHHLRTLLAQQPHGPYYLFGYSL GGTLAQGIAARLRQRGEAVAFLGLLDTWPPETQNWAEKEANGLDPEVLAEIDREREAFLA AQQGQASGELFSAIEGNYADAVRLLTTAHSAKFDGKATLFVAEKTRQAGMDPQVVWGPWV AELEVFSQNCAHVDIISPQAFEAIGPVVREILG >gi|289776635|gb|GG745509.1| GENE 414 444390 - 445184 206 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 243 1 238 309 84 26 2e-14 MSAVPSRLRGEQLTLAYGNKTIAESLNVTIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA SGHVWLDGAQIQQYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED EEAVNKAMRATGISDLALQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI DLLELLSELNREKGYTLAAVLHDLNQACRYATHLIALRDGKIVAEGAPKEIVTADLIERI YGLRCTIIEDPVAHTPLVVPLGRR >gi|289776635|gb|GG745509.1| GENE 415 445181 - 446173 1335 330 aa, chain - ## HITS:1 COG:ECs0628 KEGG:ns NR:ns ## COG: ECs0628 COG4779 # Protein_GI_number: 15829882 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 401 82.0 1e-111 MIAPSRRLIASCLVLMAASLLISLLGLAQGPVPLTIDQVFSALFGDAPRNVAMVVNEWRL PRVLMALLIGAALGVSGAIFQSLTRNPLGSPDVMGFNTGAWSGVLVAMVLFGQNLTAIAL AAMAGGVLTSLVVWLLAWRNGIETFRLIIIGIGVRAMLVAFNTWLLLRASLETALSAGLW NAGSLNGLTWGKTWPSAPLILLMLVGSALLVRRMRLLEMGDDTACALGVQVERSRLLLIL VAVVLTAASTALAGPISFIALVAPHIARRLSGTARWGLTQSALCGALLLALADYGAQRLF MPWQLPVGVLTVSLGGIYLIALLIQESRKK >gi|289776635|gb|GG745509.1| GENE 416 446170 - 447177 1522 335 aa, chain - ## HITS:1 COG:ECs0629 KEGG:ns NR:ns ## COG: ECs0629 COG0609 # Protein_GI_number: 15829883 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 402 85.0 1e-112 MSFSTTAVRSVAVPGLLLLLALAAALSLTIGAKSLPIGTVFTAFSGTCQSADCTIVLDAR LPRTLAGLLAGVALGLAGALMQTLTRNPLADPGLLGVNSGASFAIVLGAALFGITSPQEQ LLLAFCGALCASLLVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDVYDQL RFWQAGSLDIRTLQTLKIVLLPVVMAGIAALLLSRALNSLSLGNDTATALGSRVARTQLI GLIVITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADVIG RLLVPGELRVSVVSAFLGAPVLIWLVRRQPRGGGL >gi|289776635|gb|GG745509.1| GENE 417 447290 - 448531 1918 413 aa, chain + ## HITS:1 COG:STM0593 KEGG:ns NR:ns ## COG: STM0593 COG0477 # Protein_GI_number: 16763970 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 413 1 413 414 514 82.0 1e-145 MNRQSWLLNLSLLKTHPAFRAVFIARFISILSLGLLGVAIPVQIQMMTHSTWQVGLSVTL TGASMFVGLMVGGVLADRYERKRLILLARGTCGVGFVGLCLNALLPEPSLAAIYLLGIWD GFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNFG LAAAGTFITTLTLLRLPQLPPPPQPREHPLRSLLAGLTFLCQSPLIGGIALLGGLLTMAS AVRVLYPALAGSWQMSAGQIGLLYAAIPLGAALGALTSGQLAQTVRPGALMLATTVGSFV AIALFSLMPHWALGALCLALFGWLSAISSLLQYTLIQTQTPENMLGRINGLWTAQNVTGD AIGAALLGGLGAVMTPAASASASGWALALVGVLLVGLLRELRRFQRPEIVNES >gi|289776635|gb|GG745509.1| GENE 418 448888 - 449847 1186 319 aa, chain - ## HITS:1 COG:ECs0631 KEGG:ns NR:ns ## COG: ECs0631 COG4592 # Protein_GI_number: 15829885 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe2+-enterobactin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 482 80.0 1e-136 MNFFSFCRRGALTGMLLLLGITSAQAADWPRQVTDSYGTHTLPSQPLRIVSTSVTLTGSL LAIDAPVVASGATTPNNRVADSQGFLRQWSEVAKARKLARLYIGEPSAEAVAAQMPDLIL VSATGGDSALPLYDQLKTIAPTLVINYDDKSWQTLLTQLGQITGHEQQASARIADFNKQL VSLKEKMKLPPQPVTALVYTAAAHSANIWTPASAQGQMLEQLGFNLATLPGGLPASHSQG KRHDIVQLGGENLAAGLNGQSLFLFAGDQKDADAIYANPLLAHLPAVAGKRVYPLGTETF RLDYYSALLVLQRLSSLFG >gi|289776635|gb|GG745509.1| GENE 419 450035 - 451210 1395 391 aa, chain + ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 593 76.0 1e-169 METSLAEDVQKHTQTLSPDSFFFMSPYRSFSTSGCFRRFSQPAVGGDALNGEFQQQLAAA FADARAAGIRKPVMVGAIPFDTCQPSELYIPERWEAFSRPEKQRSARYAAPLETMEVVER REIPEQDAFLAMVERAAALTATPEVDKVVLSRLIDITTRDRVDSGALMERLIAQNPASFN FHVPLSDGGVLLGASPELLLRKDGPRFSSLPLAGSARRQPDDVLDREAGNRLLASGKDRH EHELVTQAMKSVLGPRSSQLSLPASPQLITTPTLWHLATPIEGTALAQENAMSLACLLHP TPALSGFPHQVAKRLIAELEPFDRQLFGGIVGWCDDEGNGEWVVTIRCARLQQRTLRLFA GAGIVPASSPLGEWRETGVKLTTMLNVFGLN >gi|289776635|gb|GG745509.1| GENE 420 451220 - 452827 2241 535 aa, chain + ## HITS:1 COG:ECs0633 KEGG:ns NR:ns ## COG: ECs0633 COG1021 # Protein_GI_number: 15829887 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Escherichia coli O157:H7 # 2 530 3 531 536 905 81.0 0 MIAFTRWPEEFAARYRQKGYWQDLPLTNLITRHAENDAVAIIDGERQISYRQFNQLVDNL ACSLQRQGLKRGETALVQLGNVAEFYITFFALLRIGVAPVNALFSHQRNELNAYAAQIKP ALLIADREHALFADDSFLHAFIAEHPSLRVALLRNDGGERDLATEINRPADNFVANPTPA DEVAFFQLSGGSTGTPKLIPRTHNDYDYSIRRSNEICGINAETRYLNALPAAHNYAMSSP GSLGVFLAGGRVILAADPSATLCFPLIEQHQINVASLVPPAVSLWLQAIHEWGSNAQLQS LELLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLNDSPERIIHTQGCPMCP DDEVWVADADGNPLPRGEVGRLMTRGPYTFRGYYNSPQHNAEAFDADGFYCSGDLISIDE DGYITVQGREKDQINRGGEKIAAEEIENLLLRHEAVIHAALVSIEDNLLGEKSCAYLVVT SPLRAVAVRRFLREQGVAEFKLPDRVECVAALPLTPVGKVDKKQLRQWLAEGKLG >gi|289776635|gb|GG745509.1| GENE 421 452841 - 453692 1345 283 aa, chain + ## HITS:1 COG:entB_1 KEGG:ns NR:ns ## COG: entB_1 COG1535 # Protein_GI_number: 16128578 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Escherichia coli K12 # 1 213 1 215 215 380 86.0 1e-105 MAIPKLQAYALPEASDIPANKVNWAFEPSRAALLIHDMQEYFLNFWGENSAMMEKVVANI AALRDFCKQNGIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQQVIAALAPDEDDTV LVKWRYSAFHRSPLEEMLKEAGRDQLIITGVYAHIGCMTTATDAFMRDIKPFFVADALAD FSREEHLMALKYVAGRSGRVVMTEELLPLPASKVALRALILPLLDESDEPLDDENLIDYG LDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWALLSREVK >gi|289776635|gb|GG745509.1| GENE 422 453692 - 454447 1167 251 aa, chain + ## HITS:1 COG:ECs0635 KEGG:ns NR:ns ## COG: ECs0635 COG1028 # Protein_GI_number: 15829889 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 4 251 1 248 248 406 89.0 1e-113 MAALDFHGQTVWVTGAGKGIGYATALAFVEAGANVTGFDLAFAGAGYPFATETLDVADAG QVRDVCARLLNNIERLDVLVNAAGILRMGATDQLSAEDWQQTFAVNVGGAFNLFQQTMAQ FRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALTVGLELAGSGVRCNLVSPGST DTDMQRTLWVSDDAEQQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASSHASHITLQD IVVDGGSTLGA >gi|289776635|gb|GG745509.1| GENE 423 454505 - 454861 478 118 aa, chain + ## HITS:1 COG:ybdB KEGG:ns NR:ns ## COG: ybdB COG2050 # Protein_GI_number: 16128580 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 118 20 137 137 207 86.0 4e-54 MVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGWLMTEEGQC VVGTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYDEKGRRCCTCRLGTAVLG >gi|289776635|gb|GG745509.1| GENE 424 455274 - 457379 3203 701 aa, chain + ## HITS:1 COG:cstA KEGG:ns NR:ns ## COG: cstA COG1966 # Protein_GI_number: 16128581 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli K12 # 1 701 1 701 701 1220 93.0 0 MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTV LGVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWI LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAM IVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILI MRPTLTMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA CFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWG FSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDP LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQK SFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMIVVVVLA LFSIKTALAALKEDKPTAKETPYQAMPADAQTITAQAKRAH >gi|289776635|gb|GG745509.1| GENE 425 457472 - 457669 332 65 aa, chain + ## HITS:1 COG:STM0601 KEGG:ns NR:ns ## COG: STM0601 COG2879 # Protein_GI_number: 16763978 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Salmonella typhimurium LT2 # 1 65 1 65 65 129 98.0 2e-30 MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRITHPDQTPMTYEEFFRERQDARYGGKG GAKCC >gi|289776635|gb|GG745509.1| GENE 426 457666 - 458070 648 134 aa, chain - ## HITS:1 COG:YPO0883 KEGG:ns NR:ns ## COG: YPO0883 COG1396 # Protein_GI_number: 16121190 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 3 128 4 120 120 114 51.0 5e-26 MTIQYIKDEEGKDQYVVIPYSDYFRMRLALLEYDDEDESDWEDIPYESDIYDNVMLPGEV CDVMHKENVSLQAAWRILRGLSQQEVAAKLGISQSAVSQLEALDSRPQKRTREKLAAIYG CTQEQISLYLPKEG >gi|289776635|gb|GG745509.1| GENE 427 458045 - 458347 154 100 aa, chain - ## HITS:1 COG:YPO0884 KEGG:ns NR:ns ## COG: YPO0884 COG2026 # Protein_GI_number: 16121191 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Yersinia pestis # 1 85 2 86 86 63 38.0 1e-10 MKIVWSKTADKQFSKIDNRYKSRIKSRLEKMDDKASPISDIKKLSSPENHYRLRLGDYRV IYTFGDPPGDTCYVVAVKRRTTTTYLHEEDTEYDYSVHQG >gi|289776635|gb|GG745509.1| GENE 428 458531 - 459274 229 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 243 4 238 242 92 31 3e-17 MQIDLTGKKALVTGASRGLGRAIALSLARAGADVVITYEKSADKAQAVADEIKALGRHGE AVQADSASAQAIQEAVTHAARSLAGLDILVNNAGIARGGPLESMTLADIDALINVNIRGV VIATQEALVHMADGGRIINIGSCLANRVAMPGIAVYAMTKSALNALTRGLARDLGPRGIT VNLVHPGPTNSDMNPEDGEQAEAQRQMIAVGHYGQPEDIAAAVTFLASPAAGQISGTGLD VDGGLNA >gi|289776635|gb|GG745509.1| GENE 429 459332 - 460420 1608 362 aa, chain - ## HITS:1 COG:ybdH KEGG:ns NR:ns ## COG: ybdH COG0371 # Protein_GI_number: 16128582 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 360 1 360 362 544 79.0 1e-155 MSNSDIRVVPGPANYFSHPGSLERLSDFFSADQLSRAVWVYGERALAGAEPFLPAAFHLP EAKKIRFTGHCSERDVAELVQASGDDRAVVIGVGGGALLDSAKVLARRLGVPLVAIPTIA ATCAAWTPLSVWYSDAGQALNFEIFDDANFLVLVEPRIILNAPAEYLLAGIGDTLAKWYE AVVLAPQPEALPLTVRLGINGALAIRDVLLASSETALADQRRGDLTQAFRDVVEAIIAGG GMVGGLGERYTRVAAAHAVHNGLTVLPQTDKFLHGTKVAYGILVQSALLAQDDVLAQLVQ AYQRFNLPTTLAALEVDINNRTELDRVIAHTLRPGESIHYLPVTLTPEVLRAAFEKVEYF SR >gi|289776635|gb|GG745509.1| GENE 430 460584 - 462086 1621 500 aa, chain + ## HITS:1 COG:BS_rbsA KEGG:ns NR:ns ## COG: BS_rbsA COG1129 # Protein_GI_number: 16080647 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus subtilis # 5 497 2 492 493 347 36.0 4e-95 MSANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYEG EVTINNQPVTIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRV RQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESE RLFAVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKML GHELSDIFPPPRPPHGEEVLLQIDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCK ALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSAD NSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQMLRRLSGGNQQKVAIGKWLRSHANVL IFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI PGAEAREETLLYYSTGGAAA >gi|289776635|gb|GG745509.1| GENE 431 462083 - 463081 1573 332 aa, chain + ## HITS:1 COG:YPO1553 KEGG:ns NR:ns ## COG: YPO1553 COG1172 # Protein_GI_number: 16121826 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 331 1 331 331 427 80.0 1e-119 MSKALAVNATVSGRQRFFDFLYKWGMLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIV TVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEAILITLALCTLVGLFN AFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQ VPTIVIIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLA GLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNG LVMLSVPYYAMDIIKGLVLAGALALTYFQRRT >gi|289776635|gb|GG745509.1| GENE 432 463102 - 464166 1714 354 aa, chain + ## HITS:1 COG:YPO1517 KEGG:ns NR:ns ## COG: YPO1517 COG1879 # Protein_GI_number: 16121790 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 353 6 361 363 553 80.0 1e-157 MKKIALSLMTLGLLQSTAALATAPTPVPAAIAEHSGPIRIAVIRNLGSDDNTTQFVSGAL QEGKKLGFKISTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIK VAVFDTAVSGEIPGVTVSQQDDASLTELSFGQLVKDFNGKANIVKLWVAGFPPMERRQAA YQTLLKQNPGIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYK ALKENGRTEIKLYSIDISNQDLQLMREAGSPWKVSVAVDPKLIGATNVRLIANKIAGEPT PATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK >gi|289776635|gb|GG745509.1| GENE 433 464270 - 465511 1728 413 aa, chain + ## HITS:1 COG:YPO1516 KEGG:ns NR:ns ## COG: YPO1516 COG5276 # Protein_GI_number: 16121789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 3 413 7 418 418 714 83.0 0 MSALPSPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSVVDVRDPTRPTT VNYIAAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRSVGDTVSDVQDKGWS AGLRIFDISTPAQPREISFLSLNGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADP RKPEVAGRWWLPGMHQAGGETPDWPQGKRYALHHAIIAGDTAYGSWRDGGLTLLDVKDRT QPTLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPSNPV SIATFPPPDEADYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPL ETGALVPAAPKTMMDTRPGRPQVIQSCDVFVDAQGIIYSTDYNGGLSVIEYLG >gi|289776635|gb|GG745509.1| GENE 434 465809 - 467008 1700 399 aa, chain - ## HITS:1 COG:BS_ykrT KEGG:ns NR:ns ## COG: BS_ykrT COG4857 # Protein_GI_number: 16078420 # Func_class: R General function prediction only # Function: Predicted kinase # Organism: Bacillus subtilis # 4 379 11 377 399 302 42.0 7e-82 MSQYHTFTAHDAVAYAQQFAGIDNPSELVSAQEVGDGNLNLVFKVFDRQGVSRAIVKQAL PYVRCVGESWPLTLDRARLEAQTLVAHYQHSPQHTVKIHHFDPELAVMVMEDLSDHRIWR GELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFSNPAMCEITEDLFFND PYQIHERNNYPAELEADVAALRDDAQLKLAVAALKHRFFAHAEALLHGDIHSGSIFVAEG SLKAIDAEFGYFGPIGFDIGTAIGNLLLNYCGLPGQLGIRDAAAAREQRLNDIHQLWTTF AERFQALAAEKTRDAALAYPGYASAFLKKVWADAVGFCGSELIRRSVGLSHVADIDTIQD DAMRHECLRHAITLGKALIVLAERIDSVDELLARVRQYS >gi|289776635|gb|GG745509.1| GENE 435 467110 - 468138 1334 342 aa, chain + ## HITS:1 COG:TM0911 KEGG:ns NR:ns ## COG: TM0911 COG0182 # Protein_GI_number: 15643673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Thermotoga maritima # 4 329 3 331 343 264 47.0 2e-70 MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASL LLALLAQRGLNRDALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLV EEDKQLCDRIAEAGSALVKPGSRLLTHCNTGGLATAGVGTALGVIALAHRQGKVANVWVD ETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKI GTYSLAVLAHYHQIPFYVAAPQTTLDRYCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPM GAAVYNPAFDVTPAGLVSGWVLDSGVVTPAQVAAGAFAPDNG >gi|289776635|gb|GG745509.1| GENE 436 468199 - 469464 1670 421 aa, chain - ## HITS:1 COG:no KEGG:KPK_3948 NR:ns ## KEGG: KPK_3948 # Name: not_defined # Def: histidine acid phosphatase family protein # Organism: K.pneumoniae_342 # Pathway: Inositol phosphate metabolism [PATH:kpe00562]; Aminobenzoate degradation [PATH:kpe00627]; Riboflavin metabolism [PATH:kpe00740]; Microbial metabolism in diverse environments [PATH:kpe01120] # 1 421 2 422 422 798 100.0 0 MPARHQGLLRLFIACALPLLALQSAAAADWQLEKVVELSRHGIRPPTAGNREAIEAATGR PWTEWTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPLQRTRAT AQALVDGAFPGCGVAIHYVSGDADPLFQTDKFAATQTDPARQLAAVKEKAGDLAQRRQAL APAIQLLQQAVCQADKPCPIFDTPWQVEQSKSGKTTISGLSVMANMVETLRLGWSENLPL SQLAWGKITQARQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEANPNVRW LLLVAHDTNIAMVRTLMNFSWQLPGYSRGNIPPGSSLVLERWRNAKSGERYLRVYFQAQG LDDLRRLQTPDAQHPMLRQEWRQPGCRQTDVGTLCPFQAAITALGQRIDRSSAPAVAMVL P >gi|289776635|gb|GG745509.1| GENE 437 469494 - 470852 1980 452 aa, chain - ## HITS:1 COG:VCA0707 KEGG:ns NR:ns ## COG: VCA0707 COG2271 # Protein_GI_number: 15601463 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Vibrio cholerae # 4 433 1 435 459 303 37.0 3e-82 MSGIIAFFRASPPKAGAAFDEQRFRRVRWQTFIAMTLAYVTFYVCRLSFTVAKSALVDLG ITPTELGMIGSTLFFSYAIGKLVNGFIADHANVVRYMSLGLLLSAGMNLMMGMTTNALLL AIFWGINGWAQSMGVGPCAVSLARWYGVKERGTFYGIWSTAHNIGEAVTYMVIAAVIAGF GWQMGYLSTAALGAAGVVLLVLFMHDSPQSSGFPSINVIRDEPQEEAEARGSVFKNQLLA LRNPALWTLALASAFMYIDRYAVNSWGIFFLEQDKAYSTLEASGIIGVNAIAGIAGTIIA GMLSDRFFPRNRSVMAGFISLLNTAGFALMLWSPHNYYTDILAMIIFGATIGALTCFLGG LIAVDISSRKAAGAALGTIGIASYAGAGLGEFLTGIIIDKTAILENGKTLYDFSTLALFW VGTGLGSALLCFTTAAIVARRHAVERQTSFSS >gi|289776635|gb|GG745509.1| GENE 438 470963 - 471772 1126 269 aa, chain - ## HITS:1 COG:AGl192 KEGG:ns NR:ns ## COG: AGl192 COG0483 # Protein_GI_number: 15890205 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 260 11 266 276 236 44.0 5e-62 MQSQESEALQARYRLACELAKAGAELAFEYYQQREALTVDHKGNDLQDVVSVADKRVEAF VKQRIQSAFPQDGFLGEESGTRLPDARILWVVDPIDGTSCFLNGLHTWCLSLAIVADGEP VIGVVYDPNHRELFHALRGHGAWLNDAPIRPHPATTVKEGVMGVGTSHRVTPADFLPFLQ ALLSDGGMFIRNGSGALMSAWAAAGRLIGYYEPHMNPWDALPGLVLMREAGGASNDFLAQ EGIQRGNPLLLASQTLYPQLKKMIPQPLH >gi|289776635|gb|GG745509.1| GENE 439 471894 - 472877 1241 327 aa, chain - ## HITS:1 COG:SMb20154 KEGG:ns NR:ns ## COG: SMb20154 COG1609 # Protein_GI_number: 16263902 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 4 327 3 328 328 196 38.0 7e-50 MSDKKWIKAEDVARLAGVSRSAVSRTFTPGASVSEKTRQKVLSAAEALGYQVNIIARTMI TGSSNFIGIVTAGFDNPFRSKLLAPLVHQLALNGFMPLLMNADDPQQLAPSLKQLLSYHV AGVIITSGAPPLSLAEEYLARKIPVTLINRHADLAGCDRVCSDNAQGAKLVADLFSRRGW QQVGFIGENRENFSTRQRYEAFIARTSGMAVSSRFCDGGGYQAGYQAARELVAENPGVQA LFCATDMLALGALDGLRDAPAPLPAIVGFDDIPQADWQPYQLTTVQQNTALLAHHAVDLL MTRIARFSLPSRHREVPVKLIIRHSAK >gi|289776635|gb|GG745509.1| GENE 440 472990 - 474228 1666 412 aa, chain - ## HITS:1 COG:codA KEGG:ns NR:ns ## COG: codA COG0402 # Protein_GI_number: 16128322 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 3 400 9 405 427 484 59.0 1e-136 MKIINARLRRQEALFTLDLQDGMIHRISAQAAMQSADAGDIDAQGRLAIPPFVEPHIHLD ATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDV TDPSLAALKALLAVKQEAADLIDLQIVAFPQEGIESYPDGRGLMTRAIEMGADVVGGIPH YENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAG INVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGD NYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGKVILQREVEHIRYPA >gi|289776635|gb|GG745509.1| GENE 441 474225 - 475460 1738 411 aa, chain - ## HITS:1 COG:CAC1426 KEGG:ns NR:ns ## COG: CAC1426 COG2508 # Protein_GI_number: 15894705 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 1 399 1 387 397 126 23.0 8e-29 MSLTVSELLALEGLSALRLRAGKQGLQRAVRWYYVAENEHIAEWIMGGELVFITGINHPR DEANLIQLLMEGKQRGIAGMVILTGEAYIHAIPATLIALADELGIPLIEQPYLLKMVIVT ERIGTALVRSENALQSQRDILMQLVTGDYPDLQMLHQRALHQQLDFTRPLRLAALRLEGL SRLFRQFPPEQAEAWLLQAHRSVRQQLQQQLNQQSNPFPLLERSNMFLFLLPDEEGEGFQ QKKWLQQWLQALADGEEGLSLLCGLSAPVRQLQGYPRALSQARQALDLCDTLRPTQRISD YQQLGFIKLLSAVSDPALLNDFMHDTLGCLIEPGRKAPWLLLETLETLLQENGNVVRAAD RLGLHRNTLHQRIQRIEKLTGYPVSHPQFHLNASVALVIWRLSQNHLQDPP >gi|289776635|gb|GG745509.1| GENE 442 475457 - 476116 1044 219 aa, chain - ## HITS:1 COG:STM3333 KEGG:ns NR:ns ## COG: STM3333 COG1457 # Protein_GI_number: 16766628 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Salmonella typhimurium LT2 # 1 216 199 411 417 91 33.0 1e-18 MVFGTFASGATQATNWTRLANSSRTAILASMGSFLIGNGLMIVAGAWCAIVYQQADIVEV LILQGLSVAAVIMLCLNLLTIQGPTIYNVSAAACHLLRSERRRTLTIAAAGVGIVLAIGG MYEMLIPFLVLLGSIIPPIGGVILADYWFARGGRYPLLQNARLPRFNWLGLGAYAAGAVV AYLSPWIAPLVGITVSALVYIVLSLLSKRQPAAVAEQEP >gi|289776635|gb|GG745509.1| GENE 443 476132 - 476719 829 195 aa, chain - ## HITS:1 COG:PA0438 KEGG:ns NR:ns ## COG: PA0438 COG1457 # Protein_GI_number: 15595635 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 1 195 1 192 416 105 35.0 5e-23 MSNSNDFPLVEAPAAGRKGVFSIAMVLFSFTFFTGTMFAGGKLGVSFSIVNLLWIAVIGN ALLALYAASLGWIAARSGLNTVLMGRFCFGEIGSKLADFILGFAELGWYAWGTATVAISL VKILALPEALTQPLMVLFGILFCVTALVGYKGLDALSRLSVPLMFVLLMVSMYLALHHAG GWQAMTRIAPSDTMT >gi|289776635|gb|GG745509.1| GENE 444 477171 - 477779 795 202 aa, chain + ## HITS:1 COG:aq_1979 KEGG:ns NR:ns ## COG: aq_1979 COG0235 # Protein_GI_number: 15606975 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Aquifex aeolicus # 2 195 9 201 208 179 42.0 4e-45 MWQERLAQLVTTCHWIGAKGWAPATGGNMSVRQDDTWCWLSESGRDKGSLTTEDFLQVEI ATNQAPSGRKPSAETGLHTLVYRLFPEANVVLHVHTVNATVLSRIEKSDTLALQGYEMQK TLSGQHSHLDTVPVAIFDNDQDIDALAARIADYAQTRPLRYGFLLRGHGLTCWGKDIQEA RRQLEGLEFLFECELMRRRYEP >gi|289776635|gb|GG745509.1| GENE 445 477792 - 478502 976 236 aa, chain + ## HITS:1 COG:mlr7268 KEGG:ns NR:ns ## COG: mlr7268 COG1070 # Protein_GI_number: 13476054 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Mesorhizobium loti # 2 236 3 236 517 140 36.0 2e-33 MDFYLGIDIGTSRVKAVLFDQHFTACASAAENTSPRLSANGYAEQDMTQLWHSVLAILRQ IARHPALQAGRLRAIGLAGQGEGVWLSDEQGEPVGPGILWSDTRSHELMSDLLRRPGFDR RYFADTGTHLQPCNTSLQLYWLKHYQPARLAAARYLFFAKDWIRFRLTGVAALELTDASS SLLNQQTGNWSSVVMNEMGLNELLPLFPPLLAPDAPAGTLSDAVAALTGLPAATPV >gi|289776635|gb|GG745509.1| GENE 446 479049 - 480077 1369 342 aa, chain + ## HITS:1 COG:BS_yoaD KEGG:ns NR:ns ## COG: BS_yoaD COG0111 # Protein_GI_number: 16078917 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Bacillus subtilis # 19 338 32 329 344 196 35.0 5e-50 MKIVFTAEHAGDLSAFHQLGELLVEGWALGKPKLSAGQLIELAHDAEVLVTSYDEVTDAV MAACPRLQVIACTRANPVNIDTQAAQARGIRVLYTPGRNADAAAELTLGLMLSLARHIPQ SHAALKRGEFTQADNAAAATQQGLRRDVVWDVSPESPYEVFKGSELRNKTLGLVGYGNIG RRVARIARAFGMAVLVVDPFVAAEDINEPGLQKTTLEALFREADIVSLHLSSGPHSDGLV NAALLNSMKPGALLINTSRAAVVDEAALIDALRHGPLGGAALDVYHREPLWRDHPFVIEF DNVIITPHIAGATRESIAKHTAMIAADLQRYVAGEPLLYQWR >gi|289776635|gb|GG745509.1| GENE 447 480113 - 481054 1126 313 aa, chain - ## HITS:1 COG:YPO1816 KEGG:ns NR:ns ## COG: YPO1816 COG0524 # Protein_GI_number: 16122068 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 7 308 5 307 319 223 41.0 3e-58 MATFDAVFVGLTILDIAGRPVVAIPPRGGVAFIEQIRLNPAGTAAGANINAAKLGIRTAA VACLGEDEKADFILASYARLGIDCSLIQRTALKETSATILPIRPNGERPALHCRGASDAL FVSETEFDAVLDCRFLHHGGTGLLAAMDQGQSARLLQAAKARGVTTSFDLIAPNEDTLEL LRPLLPSVDYFMPSLEEAAFLSGETQPEAIGRFFLALGVGTCILKDGENGSWLIRRDGAL EHIAPWPVEAVDTTGCGDSYCGGFIAALARGLSVKAACDVASAVAALVATGMGSDAGVVD WEQTQAFMAAHRP >gi|289776635|gb|GG745509.1| GENE 448 481066 - 482070 1592 334 aa, chain - ## HITS:1 COG:YPO1553 KEGG:ns NR:ns ## COG: YPO1553 COG1172 # Protein_GI_number: 16121826 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 22 328 20 331 331 137 34.0 2e-32 MSQITLKTPAPTEQTASSPLAWLSRAGFGVITLLAIALFGWANPVFLTVDNWANLLQGSA ILLIVAMAMTLIVSAGAIDLSVGVALDFGAAFALVALKTWHLPWQAAVGCALLGGVLIGL LNAFLILICRIRPFLATLGTWFIASSAERIYTDGGGAIAYRRMAPEYHDLAVGSLGGIPT PVVIVLALWLVAWLVTERTLWGKYVRAIGQNSEAARIAGIRDRLTMLGVLVAASALCAVG GVILSANLRQFTPLAGQSYLMDAIAAVFIGTAFNRLGRVSILGTLGGVLFLAIIDNGLNL MGLNYLVKDALVGVILVVALALSFWQARLRQTHR >gi|289776635|gb|GG745509.1| GENE 449 482067 - 483056 1411 329 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 20 325 33 330 330 119 31.0 6e-27 MSTAIQRRGRPGLATLIEKFPLILFLALLVWLSVQSPYFLSWQNISLMLVQSVPLAILCF GLVCVIAVGGDDVVSGGIDLSLPATAVLGVALLSLGLAEWHTPYLLLLALLAAVCLLCGA INGFLVLAAGLPPLLATLSTSVAFTGLTDLLTGQRRIAVSDPLMVAFRDNSVLGLPWPLI YLLGVFILFQFLLHHSRFGQHVQAVGGNRDMAQMSGLNVRRLTLLVWLLAGIAAGLAILP LLSQGSGSSSGTATPLLLETVLATFIGAAFSRRRVVTIWGALLGAILVNALSNGLGLLGV NIFWMGAIKGGLILVVLAASAVRHKGGEA >gi|289776635|gb|GG745509.1| GENE 450 483053 - 484555 183 500 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 270 474 21 214 311 75 25 7e-12 MDQIGKRFASVTALNSVTLRLNPGEIHGLIGENGAGKSTLIKILAGVYQADSGSATLDGH PLPLGNPAAIEAAGIRVIHQELNLIPHFTVAESVFLGQEYRTRWGALDRRRMKAATAQFF QQNWQLAIDPERLVRDLSLAERKLVQIARALIDGAARLVVFDEPTAPLEAQEASLVSSAI LRLRDQGIAILYISHYLNEIATLCDRGTVLRNGEVVGYPDRDLLQNTEALIAMMVGREID QLYTPRQHPAADTGAAPLLSVRQLSDGRQLQDLSFDIQPGEIVGVAGLLGAGRDVLVDLL YGLRPAERGTIHLDGQPRRIRTPKQAIRAGMALVPRDRRHQGLILPFTTADNINLASLPE TATFGWERRGIAEQKARDWIEQLAIRPGRPALPVRYMSGGNQQKAILARWLGTDARLFIL DEPTLGVDIGARRDIYQRTRQLADKGRAVLVSSSDAPELLGLCDRILVLWRGTLAANLPT RGLTLDALLVAINGGQEPSL >gi|289776635|gb|GG745509.1| GENE 451 484600 - 485580 1323 326 aa, chain - ## HITS:1 COG:YPO1517 KEGG:ns NR:ns ## COG: YPO1517 COG1879 # Protein_GI_number: 16121790 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 5 297 7 309 363 73 28.0 4e-13 MSQKRKLLPAALGLLSLASLSVTAADALSLQGKTIGVAVVGTQHFWDREAFKGATEEVEK LGGKVIGVDGGRDNQVHANNHDILLSRKVDAVISILGDSAVEPKFKALRDAGIPVFTVDH VSQYSVNNTTSDNYTLGSTIGRYMADELGGKGNVAVFNAFSSALRICGIRYDQWKYVLKD YPDIHIIQPELAEQFANSPEDARKKTLELLSQYPKGKLDAIHVACWDQPAIGIVQALEET GRDKDVKVTAIDAGPETLEIMAEPGSPFVANVAQQPHLIGQTSADNVARYFAGQKLPVQT FIPVIPVKGPQEAKAVYKQLGYGELQ >gi|289776635|gb|GG745509.1| GENE 452 486019 - 488301 2497 760 aa, chain + ## HITS:1 COG:MT1487 KEGG:ns NR:ns ## COG: MT1487 COG0243 # Protein_GI_number: 15840899 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Mycobacterium tuberculosis CDC1551 # 2 757 9 765 766 686 49.0 0 MHWGTWQVESREGDIVAVNPVPWDKNPSRIGQSLPDAVTSQTRIRRPAVRAGYLQQGPAS REGRGKEPFVEVSWEVALDLLARELRSVKARCGNEAIYGGSYGWASAGRFHHAQSQLHRF LKGFGGYTASTNTYSSAAGERILPHILGPLSPLHRQHTHFSELARECQLFVAIGGLPLRN AQVNGGGANDHMLPYWLDKMQANGTRFINISPVRNDLSAVPDAEWLAIRPGTDTALLLAL SYVLIAESLYDQAFVASHTVGFAPYRAYLLGEHDGVAKTPAWAAAITGLDAQRIADLARE MARHRTMVNISWSIQRARQGEQAYWATVALTALLGQIGTPGGGLGFGYACTNLAGAVRKA FSGPRLPAGENAVDSVIPVARLSDMLLHPGEAYEFDGQQLRYPDIRLVYWAGGNAFHHHQ DINRLCEAWRRPETVVVHEQYWTAQAKFSDIVLPATTSLEREDIGSGGHDGFMIAMSAQI PPVGEARDDYAIFHDLADRLGFGEQFSEGRDAGQWLRHLYEESRPRAQEEGIALPSFEDF WQQGVLEYSAPERPQIFLADFRADPQRYPLSTPSGKIELFSATVAGFGYRECPGHPWWDE EEAARQRQEAARWPLHLLSSQPRARLHSQYDHGSVSRATKIQGREPLWMHPSDAQARDIR EGSVVKVYNDRGAILAGVHLSEQILPGVVQMSTGAWYDPLDPNEKGTLDKHGNPNVLTED RGSSRLGQGCSAQSCWVEIAPWREALPPITAFDPPRFIEV >gi|289776635|gb|GG745509.1| GENE 453 488409 - 488951 655 180 aa, chain - ## HITS:1 COG:PA1684 KEGG:ns NR:ns ## COG: PA1684 COG1791 # Protein_GI_number: 15596881 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Pseudomonas aeruginosa # 1 179 1 179 181 213 59.0 2e-55 MSALTLFSVTDPQTPLWHSTDAKAIQDQLNAKGVRFERWQADRDLGANPSPETVIAAYQH AIDKLVAEKGYQSWDVISLRADNPQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLHIGD EVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGWIAQFTGDDIASAYPRLA >gi|289776635|gb|GG745509.1| GENE 454 488948 - 489637 669 229 aa, chain - ## HITS:1 COG:XF2211 KEGG:ns NR:ns ## COG: XF2211 COG4229 # Protein_GI_number: 15838802 # Func_class: C Energy production and conversion # Function: Predicted enolase-phosphatase # Organism: Xylella fastidiosa 9a5c # 1 213 3 214 232 205 52.0 5e-53 MIRAIVTDIEGTTSDIRFVHNVLFPYARERLAGFVTAQQYAEPVKTILDNLRRETDAPAA STADLITTLFAFMDEDRKSTALKALQGIIWRDGYLNGDFTGHLYPDVLPALEKWKAQGID LYVYSSGSVAAQKLLFGYSDEGDITHLFTGYFDTLVGAKREVQSYRNIAEHLGHAPGTIL FLSDIHQELDAAEAAGLRTIQLVRGDRDPASHHPQVQRFDDIHPEQIPA >gi|289776635|gb|GG745509.1| GENE 455 489763 - 490923 1538 386 aa, chain + ## HITS:1 COG:ECs0639 KEGG:ns NR:ns ## COG: ECs0639 COG0436 # Protein_GI_number: 15829893 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 657 84.0 0 MSNNPLIPESKLPALGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAYHVAQGA NQYAPMTGVPALREAIAGKTAELYDYLPDVNSDITVTAGATEALYAAITALVRRGDEVIC FDPSYDSYAPAVALAGGELRRIALQPPHFRVDWQQFAAALSDKTRLVILNTPHNPSATVW QREDFAALWQAIAEREIYVLSDEVYEHICFAEGGHASVLAHPQLRERAVAVSSFGKTFHM TGWKVGYCVAPAAISAELRKVHQYLTFSVNTPAQLAIADMLREAPEHYRELPAFYRERRD LFIEALRPSRLELLPCEGTYFLLADYSAISDLDDVSFCRWLTTEVGVAAIPLSVFCADPF PHKLIRLCFAKQPATLLAAATRLCQL >gi|289776635|gb|GG745509.1| GENE 456 490924 - 491550 545 208 aa, chain - ## HITS:1 COG:STM0604 KEGG:ns NR:ns ## COG: STM0604 COG1475 # Protein_GI_number: 16763981 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 208 1 205 205 288 66.0 5e-78 MQQQLTQALDVYLQTLDDEARIEAINAFRQVLHQRSPFRSQPVDCVLWVKQEQVIPNDYN PNNVAPPEKRLLQTSLEADGFTQPVVVIQQSPQAYTIVDGFHRHELACSKAVLKKTLKGY LPVTCLTSEAASRDGLMAATIRHNRARGRHQIHAMSEIVRELTQLGWTPQKIGKELGMDA DEVLRLKQISGLTEMFAGRQFSQAWTIK >gi|289776635|gb|GG745509.1| GENE 457 491535 - 492758 1388 407 aa, chain - ## HITS:1 COG:ybdN KEGG:ns NR:ns ## COG: ybdN COG3969 # Protein_GI_number: 16128585 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli K12 # 1 407 1 406 406 637 73.0 0 MSFIKYPLPESVLQATEQRIQWVLDNFSRVCVSFSGGKDSTVMLHLTAQAARLQGKKISV LFIDWEAQFSCTIAHCEKLRALYADVVETFYWVALPLTTQNALTQYKPQWQCWEPGADWV RQPPPWAITHPGYFSFYQPGMSFESFVSHFAEWFSQRRPAAVLVGIRADESLNRFMAISS QRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSRQSYNPLYDLMYQAGVPL RYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKP DHLTWKSYALFLLDSMPETTAEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWR RVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQWGILCNNN >gi|289776635|gb|GG745509.1| GENE 458 492870 - 493802 553 310 aa, chain - ## HITS:1 COG:ybdO KEGG:ns NR:ns ## COG: ybdO COG0583 # Protein_GI_number: 16128586 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 295 1 296 300 268 48.0 1e-71 MANLYDLKKFDLNLLVIFECIYQHLSISKAAAMLFITPSAVSQSLQRLRQQLNDPLFVRV GKGMTPTTACVNLHYHLQQNLEQLEKTINLNNRSELRKRIVIYGPPLFCSVNSHFMINEL CHQANLQIEHHNLTTTESAEELLAYRQADLVFTRMPITNRATICQPYQTVQTLAVCRADH PRRDQLTSIEALAQEFFTHYITNDPVIQRVQQSSTPWLNPGNIAFRSDSFMTILNMINKT DLIGFIPSYLYDFISPAMPLHALDIEALFPEITIYINYHQSSTQNHFLSELISILMNDRD ISRPQLNNSE >gi|289776635|gb|GG745509.1| GENE 459 493983 - 494732 961 249 aa, chain - ## HITS:1 COG:STM0607 KEGG:ns NR:ns ## COG: STM0607 COG1651 # Protein_GI_number: 16763984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 1 247 1 247 248 372 77.0 1e-103 MLKRLLLLSLFPLCSQAEELPAPVKAIEKQGITIIKPFEAPGGMKGWLGKYQDMGVAIYL TPDGKHAISGYMYDENGNNLSEQLFQKELYTPAGQEMWKKMASAHWLQDGNKDAPIVLYV FADPFCPYCKQFWQQSRPWVEAGKVQIRTLLVGVIKPESPATAAAILATKDPAKTWHDYE QSNGKMALTIPQAIPPEKMKVLNVNQQLMDELGANVTPAIYYMNKDNMLQQVVGLPDKEK LQIMMGEQE >gi|289776635|gb|GG745509.1| GENE 460 495144 - 495707 676 187 aa, chain + ## HITS:1 COG:STM0608 KEGG:ns NR:ns ## COG: STM0608 COG0450 # Protein_GI_number: 16763985 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 380 99.0 1e-105 MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE LQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPS LDLVGKI >gi|289776635|gb|GG745509.1| GENE 461 495896 - 497461 409 521 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 213 515 2 303 306 162 31 4e-38 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNTLAV RKPSFLITNPGSDQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFE FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVYLNGQE FGQGRMTLTEIVAKVDTGAEKRAAEELNQRDAYDVLIVGSGPSGAAAAVYSARKGIRTGL MGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYNVDVIDSQSATKLTPAATEG GLHQIETASGAVLKARSVIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV IGGGNSGVEAAIDLAGVVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGD GSKVTGLQYRDRVSGDEHHVALAGIFVQIGLLPNTTWLEGAVERNRMGEIIIDAKCETNV KGVFAAGDCTTVPYKQIIIAAGEGAKASLSAFDYLIRTKTA >gi|289776635|gb|GG745509.1| GENE 462 497534 - 497962 508 142 aa, chain - ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 224 87.0 3e-59 MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEE HLQHEAETRLQTMVSHFSIDPSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSIST HLLGSNASSVIRHAHIPVMVVR >gi|289776635|gb|GG745509.1| GENE 463 498150 - 498560 523 136 aa, chain - ## HITS:1 COG:STM0616 KEGG:ns NR:ns ## COG: STM0616 COG0782 # Protein_GI_number: 16763993 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 136 1 136 136 212 78.0 2e-55 MTRPAIIINELDAERIDRLLEQPAFANLPVADALNDELDRAQMLAPEAMPHDVVTMNSKV KFRDLTSGEERVRTLVFPSQVTDSASQLSVLAPVGAALLGLKVGSTIHWELPGGASTHLE VLELLYQPEAAGEFHR >gi|289776635|gb|GG745509.1| GENE 464 498739 - 499536 753 265 aa, chain - ## HITS:1 COG:rna KEGG:ns NR:ns ## COG: rna COG3719 # Protein_GI_number: 16128594 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli K12 # 2 264 4 267 268 399 70.0 1e-111 MFRKDFAALALVLTATQAGAEPLTATRYADFDRYVLALSWQTGFCQSMLDRNRSEPEECR LQQDTANKADFLTVHGLWPGLPKSIAARGVDERRWMRYGCATRPVPNMPEVKANRKCQAA ETGLSLEMANKLNNVMPGSGGTSCLERYEYAKHGVCFGFDPDSYFGTMVRLNGEIKHSPV GDFLAKHYGQTVSRADFDAAVARAWGPQSVKAFKLTCNGNPAYLTEMQISLNAATINAPL ATSAFLPQPHPGNCGTQFILDKVGQ >gi|289776635|gb|GG745509.1| GENE 465 499629 - 501002 1844 457 aa, chain - ## HITS:1 COG:STM0627 KEGG:ns NR:ns ## COG: STM0627 COG3069 # Protein_GI_number: 16764004 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 1 455 1 455 461 621 92.0 1e-177 MLTFVEILIGIVVIVGVARYIIKGYSATGVLFVGGLILLIVSALLGHKVLPGNTDSTGYS ATDIIEYIKILLMSRGGDLGMMIMMLCGFATYMTHIGANDMVVKLASKPLRYINSPYLLM IAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILSPTSGD VVLAAKAAEMPLIDFAFKTTLPISIAAIICMAIAHFFWQRYLDKKENISHEMLDVNDITT TAPALYAILPFTPIIGVLIFDGKWGPELHIITILVGCMLLAAILEFLRGFNTKNVFSGLE VAYRGMADAFAGVVMLLVAAGVFAQGLSTIGFINGLISIATSFGSASIILMLVLVILTML AAMTTGSGNAPFYAFVEMIPKLAHSSGINPAYLSIPMLQASNLGRTISPVSGVVVAVAGM AKISPFEVVKRTSVPVMVGLLVVIIATEILVPGSAVH >gi|289776635|gb|GG745509.1| GENE 466 501290 - 501859 662 189 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3711 NR:ns ## KEGG: Kvar_3711 # Name: not_defined # Def: antimicrobial peptide resistance and lipid A acylation PagP # Organism: K.variicola # Pathway: not_defined # 1 189 1 189 189 359 100.0 3e-98 MLRRFSLFSLGFFGWLLVSVNASASFSSTLSEGYHTLSNNVAQTWNEPEHYDLYVPAITW HARFAYDKEKTDKYNERPWGAGFGVSRWDEKGNWHGLYLMAFKDSFNKWEPIGGYGWEKT WRPLTDQNFHLGLGYTLGVTARDNWDYIPIPVILPLASIGYGPATFQMTYIPGTYNNGNV YFAWARIQF >gi|289776635|gb|GG745509.1| GENE 467 502054 - 502263 316 69 aa, chain + ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 95.0 5e-28 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQRVEFEITNGAKG PSAANVMAI >gi|289776635|gb|GG745509.1| GENE 468 502330 - 502713 392 127 aa, chain - ## HITS:1 COG:STM0630 KEGG:ns NR:ns ## COG: STM0630 COG0239 # Protein_GI_number: 16764007 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 177 81.0 3e-45 MFQLLCAVFIGGGTGSVLRWWLGMKLNPVHHAIPIGTLTANLVGAFVIGAGLAWFNRLTD IDPMWKLLITTGFCGGLTTFSTFSAEVVFLLQQGRVSWALLNVMVNLLGSFAMTAVAFWL FSQAASR >gi|289776635|gb|GG745509.1| GENE 469 502803 - 503591 664 262 aa, chain + ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 353 68.0 2e-97 MRVAAGQFAVTPVWRTNAQTCVTMMQQAAREGAALLVLPEALLARDDNDPDMSVKSAQPL DGAFLQLLLAESGRNRLTTVLTLHVPSAEGRATNTLVVLRDGEVIAHYHKLHLYDAFAMQ ESRRVDPGQQIPPVIEVAGLRVGLMTCYDLRFPELALSLALNGAELLVLPTAWVRGPQKE HHWATLLAARALDTTCYIVAAGECGTRNIGQSRIVDPLGTTLAGAGSEPQLIFADVSAEH LARVRERLPVLQNRRFAPPQLL >gi|289776635|gb|GG745509.1| GENE 470 503830 - 504042 176 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 70 1 67 83 72 50 5e-11 LAMGEISITKLLVVAALIILVFGTKKLRTLGGDLGSAIKGFKKAMNEDDDSAKKATVEEE APAQKISHKE >gi|289776635|gb|GG745509.1| GENE 471 504252 - 505217 1092 321 aa, chain - ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 640 95.0 0 MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSSRIQGIKAAMR KNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPQKLA QTIADMGLRYVVVTSVDRDDLRDGGAQHFADCISAIREKNPSIKIETLVPDFRGRMDRAL DILTVTPPDVFNHNLENVPRLYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGE TNDEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPEEFEEMKAEAMAMGFTHAA CGPFVRSSYHADLQAKGMEVK >gi|289776635|gb|GG745509.1| GENE 472 505398 - 506357 564 319 aa, chain - ## HITS:1 COG:STM0634 KEGG:ns NR:ns ## COG: STM0634 COG0583 # Protein_GI_number: 16764011 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 330 52.0 2e-90 MPENTSPSESPERQDERYDRQMFRILRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAI SQSINKLRALFPDPLFIRKGQGVMPTAYATHLHQYISRGMEAFLSALDIAGSPHQQRVIT IATTPGMGALLIPIVASALKPAFPQILLHNIAITDAARQLDQRQVDLLIDTHLHSGQAIS HHVLYQDRVRMYCRAEHPALHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRC GFSTFNLLTQAAMIAESDMLGLTTERLFAMVSRLWPLQTLDFHSLQDEKINVALHYNKQS GKEPLLKEIIETVIQAFKA >gi|289776635|gb|GG745509.1| GENE 473 506487 - 507131 797 214 aa, chain - ## HITS:1 COG:ECs0668 KEGG:ns NR:ns ## COG: ECs0668 COG0321 # Protein_GI_number: 15829922 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Escherichia coli O157:H7 # 23 211 1 189 191 340 83.0 1e-93 MQHNKILIRQLGLQPYEPISQAMHEFTDARDEDTLDEIWLVEHPPVFTQGQAGKAEHVLV PGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAEYGIES HPRADAPGVYVGDRKICSLGLRIRKGCSFHGLALNIAMDLAPFLRINPCGYAGMEMTQMR QWQPEVTPETVAPRLVANLLALLNHPPHEYLPQQ >gi|289776635|gb|GG745509.1| GENE 474 507236 - 507499 385 87 aa, chain - ## HITS:1 COG:STM0636 KEGG:ns NR:ns ## COG: STM0636 COG2921 # Protein_GI_number: 16764013 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 87 1 87 87 158 98.0 2e-39 MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYSPSVKPSSKGNYHSVSI TINATHIEQVETLYEELGNIDIVRMVL >gi|289776635|gb|GG745509.1| GENE 475 507612 - 508811 1639 399 aa, chain - ## HITS:1 COG:ZdacA KEGG:ns NR:ns ## COG: ZdacA COG1686 # Protein_GI_number: 15800346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 399 1 403 403 753 91.0 0 MKTSFTARLLITALSVAALSSAARADDLNIKTMIPGAPQIDAESWVLIDYNSGKVLAENN ADSRRDPASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGM QVPVSQLIRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDA DGQYSSARDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTG HTDKAGYNLVASATEGQMRLISAVMGGRTFKGRESESKKLLTWGFRFFETVNPIKAGKEF ASEPAWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGTINFQ LDGKTIDQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG >gi|289776635|gb|GG745509.1| GENE 476 508951 - 510108 878 385 aa, chain - ## HITS:1 COG:ECs0671 KEGG:ns NR:ns ## COG: ECs0671 COG0797 # Protein_GI_number: 15829925 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Escherichia coli O157:H7 # 1 384 1 361 362 431 75.0 1e-120 MRKQWLGICIAAGLLAACSSDDVQQKTVSTPQPAVCNGPTVEISGADPQYETPNATANQD YERDGKSYKIVQDPANFTQAGFAAIYDAEPNSNLTASGETFDPTQLTAAHPTLPIPSYAR ITNLANGRMIVVRINDRGPYGNDRVISLSRASADRLNTSNNTKVRIDPIIVAPDGSLSGP GMACTTVAKQTYALPARPNLDGGDATGMNQPAPADVRPISNSTLKPEDSVGAPVNSGGFL GAPTPLNSGVLESSEPAATTAATAAPAAAVATQTAPVTAPGSIQGSVAATAATAATASAV AASSTATSSASGNFVVQVGAVSDQARAQQYQQRLSQQFSVPGRVTQNGAVWRIQLGPFAD KAQASAVQQRLQSEAQLQSFITRAN >gi|289776635|gb|GG745509.1| GENE 477 510120 - 511232 1628 370 aa, chain - ## HITS:1 COG:ECs0672 KEGG:ns NR:ns ## COG: ECs0672 COG0772 # Protein_GI_number: 15829926 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 604 95.0 1e-173 MTDNPNKKSLWDKIHLDPTMLLILLALLTYSALVIWSASGQDVGMMERKIGQIAMGVVIM IVMAQIPPRVYEGWAPYLYIFCIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAV PLMVARFINRDVCPPSLKNTAIALVLIFLPTLLVAAQPDLGTSILIALSGLFVLFLSGLS WRLIGIAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPETDPLGAGYHIIQSKIAIGSGGL RGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLIGVLILLALYILLIMRGLWIAAQAQT TFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH THRKMLSKSV >gi|289776635|gb|GG745509.1| GENE 478 511232 - 513133 2390 633 aa, chain - ## HITS:1 COG:STM0640 KEGG:ns NR:ns ## COG: STM0640 COG0768 # Protein_GI_number: 16764017 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 1 633 1 633 633 1219 92.0 0 MKLQNSFRDYTAESSLFVRRALVAFLGILLLTGVLVANLYNVQIVRFNDYQTRSNENRIK LVPIPPSRGIIYDRNGTPLALNRTIYQLEMMPEKVDNVQQTLDALRDVVDLTDDDIAGFK KERARSHRFTSIPVKVNLSEVQVARFAVNQYRFPGVEVKGYKRRYYPYNSALTHVIGYVS KINDKDVDRLDKEGKLANYASTHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK EVPPQAGRDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGAVLALVSTPSYDPNLFVDG ISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPGWWQL PGSDKRYRDWKKWGHGHLNVTKALEESADTYFYQVAYDMGIDRLSEWMSKFGYGHYTGID LSEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALMILINDGVVKV PHLLQSTVEDGKPVPWVQPHEPPVGDIHSGYWEIAKDGMFGVANRGNGTAHKYFASAPYK IAAKSGTAQVFGLKANETYNAHRISERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAV GTIMRQILDHIMLGDNNTTLPSENPAVTAGEDQ >gi|289776635|gb|GG745509.1| GENE 479 513161 - 513628 570 155 aa, chain - ## HITS:1 COG:STM0641 KEGG:ns NR:ns ## COG: STM0641 COG1576 # Protein_GI_number: 16764018 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 155 1 155 155 296 95.0 1e-80 MKLQLVAVGTKMPDWVQTGFSEYLRRFPKDMPFELVEIPAGKRGKNADIKRILEKEGEMM LAAAGKNRIVTLDIPGKPWDTPQLARELERWKQDGRDVSLLVGGPEGLSPACKAAAEQSW SLSTLTLPHPLVRVLVAESLYRAWSITTNHPYHRE >gi|289776635|gb|GG745509.1| GENE 480 513632 - 513949 385 105 aa, chain - ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 182 93.0 2e-46 MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESR AAGMLPLGVEGEAAADWIVVDLGDVMVHVMQEESRRLYELEKLWS >gi|289776635|gb|GG745509.1| GENE 481 514172 - 514801 634 209 aa, chain - ## HITS:1 COG:STM0643 KEGG:ns NR:ns ## COG: STM0643 COG0406 # Protein_GI_number: 16764020 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Salmonella typhimurium LT2 # 1 202 1 202 202 258 62.0 5e-69 MKLWLVRHGETEANVAGLYSGHAPTPLTPRGVAQARALGERLRAVPFDKVICSELARTAR TADLLLGDRHIPRESHAALNEMFFGDWEMRHHRDLQREDAQNYAAWCADWQHAAPTNGES FQNFARRVSEFTTMLADCRHLDHLLIVGHQGVLSLLTALLLQMPAAAMWHFPIAHGAWSL LDMRDDFTTLRVLNSQAVWQPQEEFPPDH >gi|289776635|gb|GG745509.1| GENE 482 514874 - 515524 878 216 aa, chain - ## HITS:1 COG:STM0645 KEGG:ns NR:ns ## COG: STM0645 COG1057 # Protein_GI_number: 16764022 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Salmonella typhimurium LT2 # 4 215 1 212 213 333 75.0 1e-91 MVDMTQLQAIYGGTFDPVHYGHLKPVEILANQIGLSKVIIMPNNVPPHRPQPEATSAQRV HMLKLAIADKPLFTLDERELQRDTPSWTADTLQAWRQEQGSEKPLAFIIGQDSLLTFPTW HRYETILDNVHLIVCRRPGYPLTMAHDADQQWLDRHLTHDVERLHNRPAGAIYLAETPWF DISATIIRQRLERGESCAEMLPATVLDYIREQGLYC >gi|289776635|gb|GG745509.1| GENE 483 515517 - 516548 1185 343 aa, chain - ## HITS:1 COG:holA KEGG:ns NR:ns ## COG: holA COG1466 # Protein_GI_number: 16128623 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Escherichia coli K12 # 1 343 1 343 343 511 84.0 1e-145 MIRLYPEQLRAQLTEGLRAAYLLLGNDPLLLQESQDAIREAAAAQGFTEHHTFTIDNSTD WQAIFALSQALSLFSSRQTLLLILPENGPNAAINEQLATLIGLLHDDLLLIVRGNKLTKA QENAAWLTALAQRAVQVSCQTPEYAQLPRWLAARAKQHQLQLDDAASQLLCYCYEGNLLA LAQALERLALLWPDGKLTLPRVEQAVNDAAHFTPYHWVDALLAGKSKRVLHVLQQLRLEG CEPAILLRTLQRELLLLVTLKRQSTHTPLRSLFDKHRVWQNRRQLLSDALARLSGEQLRQ AVTLLTRAELTFKQDYGHDVWPELESLSLLLCHKALADVFIDG >gi|289776635|gb|GG745509.1| GENE 484 516548 - 517042 616 164 aa, chain - ## HITS:1 COG:STM0647 KEGG:ns NR:ns ## COG: STM0647 COG2980 # Protein_GI_number: 16764024 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Salmonella typhimurium LT2 # 1 162 33 194 196 222 75.0 2e-58 MKTMILQSSDPNGPLSRAVRNQLRLNGVDLIDASTLRKDVPSLRLDGSSIQKDTASVFQD GRTAEYQMVMTVHASVLIPGHDIYPITTKVYRSFFDNPQAALAKDAEQDMIIQEMYDKAA EQLIRKLPSVQVADVEATQQEEKPVAGSTAPASSGNRVSTTLGQ >gi|289776635|gb|GG745509.1| GENE 485 517153 - 519735 3430 860 aa, chain - ## HITS:1 COG:leuS KEGG:ns NR:ns ## COG: leuS COG0495 # Protein_GI_number: 16128625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 860 1 860 860 1714 95.0 0 MQEQYRPEEIESKVQLHWDENRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGD VIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNITYMKNQLKMLGFGYD WSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCD TKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEISFDVNNYA DKLTVYTTRPDTFMGCTYLAVAAGHPLAQQAAANNPALAAFIDECRNTKVAEADMATMEK KGVDTGFKAIHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVI LAADGSEPDLSAQALTEKGVLFNSGEFSGLDYEAGFNAIADKLAAMGVGERKINYRLRDW GVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG QPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLY FRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGR IVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQE SGVEGANRFLKRVWKLVYEHTTKGDVAALNVAALSEDQKALRRDIHKTIAKVTDDIGRRQ TFNTAIAAIMELMNKLAKAPQEDEQDRALMQEALLAVVRMLNPFTPHASFTLWRELNGEG DIDNAPWPVADESAMVEDSTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLD GKTVRKVIYVPGKLLNLVVG >gi|289776635|gb|GG745509.1| GENE 486 519962 - 520444 597 160 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3691 NR:ns ## KEGG: Kvar_3691 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 160 2 161 161 309 100.0 3e-83 MNKVAQYYRELVSSLSERLRHGERDIDALVTQAREKIARAGDLTQSEIESVIAAVKRDLE EFARSYEESHEDESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV GLGNLVCEKCHYHLAVYTPDVLPRCPKCGHDQFQRRPFEP >gi|289776635|gb|GG745509.1| GENE 487 520491 - 522284 1872 597 aa, chain - ## HITS:1 COG:RSp1073 KEGG:ns NR:ns ## COG: RSp1073 COG3210 # Protein_GI_number: 17549294 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Ralstonia solanacearum # 24 396 80 458 3322 155 35.0 2e-37 MFKFKASYVALAAVLTSSVVYADPTSYTHSSGATVIDIEKPNAAGVSHNLYRDFNVGTNG TILNNSGDDVSHSTFGNIARNNNLTAGSASVILNEVTSKNASSLKGFIEVNGQKADVVIA NPNGITCSGCSFVNTNKAILTTGKVNMTDDGAIGSYTVSGGTLTIGENGMNAANGYAVLL ADAIKINGKVQANNALVSAGRFTMDNSSGAITSAGKQATLIEMTINPQYSIDVSSLGGIT ANSISMVGNNIGFGVRNQGSIVANSTLQLTSNGNLLNKGTIKANGLLSQVSTATGITNNG TLAGAYYLMLSSGDYIVNTGSLSGGQLIASANGNITNGDSGTMTGTSGLSLTSGGKIRNE AKASLLSNNQITATAIGDFLNEGKISAKNTNLTFVGDSFKNTGNINSTGQTTVQSLKQDG SANTGEIYNLGNITGENINLQTNGTLAQSTSGRMEATNAITAHSYWLNNNGTMKATDITT DHGVVNNTGKISAGNISITTYSNIVNEGTLYSTGDLLLNTQNKGNISNYYLIQADGTLTM NAKKVVNSGRGCGWLGFNTCDVGTLRANKLVLNSSHSYASNMGGYQYFKSTEINTVK >gi|289776635|gb|GG745509.1| GENE 488 522349 - 524019 1563 556 aa, chain - ## HITS:1 COG:YPO2491 KEGG:ns NR:ns ## COG: YPO2491 COG2831 # Protein_GI_number: 16122712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Yersinia pestis # 2 556 7 562 562 363 37.0 1e-100 MLIRSRTLTRLLFITLAGTSAAGAAQLTTSAHQTEQDKARQEALAPQQQDFQSSQQHVAP QGIPFPEETHCKLINRVDIDSDNQALTRKLLAKTARQAQGRCLGSEGIRLLAYTLQNELI AQGYITSLIDVPSQSLEHGILRLTLHYGKVGAIDYADGSDTTRLWNSLPTSSGTILRLSD LEQGMANLQRLPGATAHMKLLPGQHEGESDIQIARSLAKKWQLGAWLDDAGSKASGRYQA GGALYLYDLTTLNDILYLSGGGDIEFNQHNDGNHNGSLYYSIPFGYWTLSAYGAYSQYRQ QFNGNWSTMDYKSKNRYYSATLSRLLSHTRQQKTTADLRIAKSTSHYYFGGSELQVMRKQ TPAWEFTLNHQHYFNKKIVDASIGIQRSLPWLSSTPTPEEKAGLYSPLSRVVHGNLQALM KFDATGDKFTWAPRLSAQFSPDKLASDNKFNIGSRWSVRGFDGENSLSGNQGWYWRNDFI WDLPSSERQFYLGADVGRLIGADLYQKGKVLSGAVSGLRGELWSTQYDLFISTPLSKPDK FHSDALNMGFSLQWRY >gi|289776635|gb|GG745509.1| GENE 489 524393 - 525118 546 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 214 45 6e-54 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGQIIV DGTVVNDKKTNLAKLRSHVGMVFQHFELFPHLSIIDNLTLAQVKVLNRDKASARKKGLKL LERVGLAAHAEKYPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDADKEAFFANPQSDRAKDFLAKIL H >gi|289776635|gb|GG745509.1| GENE 490 525118 - 525792 1104 224 aa, chain - ## HITS:1 COG:STM0663 KEGG:ns NR:ns ## COG: STM0663 COG0765 # Protein_GI_number: 16764040 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 224 1 224 224 347 93.0 8e-96 MYDFDWSSIVPSMPYLLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYV NVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGI QSISRGQSSAALALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKRTV >gi|289776635|gb|GG745509.1| GENE 491 525792 - 526532 1240 246 aa, chain - ## HITS:1 COG:gltJ KEGG:ns NR:ns ## COG: gltJ COG0765 # Protein_GI_number: 16128637 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 246 1 246 246 440 91.0 1e-123 MSIDWNWGIFLQQAPFGNTTYLGWLWSGFQITVALSISAWIIAFLVGSLFGILRTVPNRF LSGIGTCYVELFRNVPLIVQFFTWYLVVPEFLPENIGMWFKSELDPNIQFFVSSMLCLGL FTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLV KNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIMYVVERKVRLP GNMGGK >gi|289776635|gb|GG745509.1| GENE 492 526697 - 527653 1451 318 aa, chain - ## HITS:1 COG:STM0665 KEGG:ns NR:ns ## COG: STM0665 COG0834 # Protein_GI_number: 16764042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 12 318 3 308 308 545 90.0 1e-155 MGINSAADATDKELDMQLRKLAAAMLVMGVTAGLAHAEDAAPAAGQSTLDKIAKNGVIVV GHRESSVPFSYYDNQQKVVGYSQDYSNAIVDAIKKKLNKPDLQVKLIPVTSQNRIPLLQN GTFDFECGSTTNNLERQKQAAFSDTIFVVGTRLLVKKGGPIKDFPDLKDKAVVVTSGTTS EILLHKLNDEKKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEI VGTAQSKEAYGCMLRKDDPSFKALVDETVAQAQTSGEAAKWFDKWFKNPIPPKNLNLNFE LSDDMKALFKSPNDKALN >gi|289776635|gb|GG745509.1| GENE 493 527964 - 529502 2274 512 aa, chain - ## HITS:1 COG:STM0666 KEGG:ns NR:ns ## COG: STM0666 COG0815 # Protein_GI_number: 16764043 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 512 1 512 512 889 86.0 0 MVFASLLERQRVRLLLALLFGASGTLAFSPYDFWPAAIVSLAGLQALTLNRRPLQSAGIG YFWGFGLFGTGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTGLFAGLLSRLWPKTS WLRVAIAAPVVWQITEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPVMGVEAINFLLMMVS GLLALALVQRNWKPLAIAALLFALPFPLRYIQWYQLLPERATQVSLVQGDIPQAMKWDEK QLVNTLKTYLALTQPHIGHSQLIIWPESAIPDLEINQQQFLSMMDDLLRAKDSSLITGIV DARLNKQNRYDTYNTIITLGKDNPYRYDSTNRYNKNHLVPFGEFVPLESILRPLAPFFDL PMSSFSRGPYVQPQLMAHNLKLTAAICYEIILGEQVRDNFRPDTDFLLTISNDAWFGKSI GPWQHFQMARMRALELARPLLRSTNNGITAVIGPRGEIQKMIPQFTREVLTTTVTPTSGL TPYARTGNWPLWALTALLGFAALLMSLRQRRR >gi|289776635|gb|GG745509.1| GENE 494 529631 - 530578 1162 315 aa, chain - ## HITS:1 COG:STM0667 KEGG:ns NR:ns ## COG: STM0667 COG4535 # Protein_GI_number: 16764044 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Salmonella typhimurium LT2 # 24 315 1 292 292 496 96.0 1e-140 MPSGAEFTRDERQLNQHENPNDAMSDDNSHSSDTVNSKKGFFSLLLSQLFHGEPKNRDEL LALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIE SAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMEKVLRPAVVVPESKRVDRMLKE FRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEEDIDFRQLSRHTWTVRAL ASIEDFNDAFDTHFSDEEVDTIGGLVMQAFGHLPARGESIDIDGYQFKVAMADSRRIIQV HVKLPDDAPQPKLEE >gi|289776635|gb|GG745509.1| GENE 495 530657 - 531130 701 157 aa, chain - ## HITS:1 COG:STM0668 KEGG:ns NR:ns ## COG: STM0668 COG0319 # Protein_GI_number: 16764045 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 258 88.0 3e-69 MSQVILDLQLACEETSGLPDEALFQRWVDAVIPPFQEESELTIRLVDVAESHELNLTYRG KDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEASEQGKPLEAHWAHMVVHGSLHLL GYDHIEDDEAEEMEGLETEIMLALGYEDPYISEKIAE >gi|289776635|gb|GG745509.1| GENE 496 531127 - 532173 1429 348 aa, chain - ## HITS:1 COG:STM0669 KEGG:ns NR:ns ## COG: STM0669 COG1702 # Protein_GI_number: 16764046 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Salmonella typhimurium LT2 # 1 348 14 361 361 628 96.0 1e-180 MNIDTREITLEPADNARLLALCGPFDDNIKQLERRLGIEINRRDNHFKLTGRAICVHAAA DILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDITQIDLPRSTKSGLRHAIEVLAEVDEISFN FFHSEDVVRHPVVARIVNAYEAWEAADQKRKAELAAERKREAQEQEQK >gi|289776635|gb|GG745509.1| GENE 497 532327 - 533751 498 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 441 17 462 462 196 30 2e-48 MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTEVAEEADVLLLNTCSIREKAQEKVF HQLGRWKLLKEKNPDLIIGVGGCVASQEGDHIRQRAHYVDIIFGPQTLHRLPEMINAVRG NRSPVVDISFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPCDD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSH PIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLREARPDI QISSDFIVGFPGETTDDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEDKKQ RLYILQERINQQAMAWSRRMLGTVQRILVEGTSRKSLMELSGRTENNRVVNFEGTPDMVG KFVDVEIVDVYTNSLRGKIVRTEAEMGLRIAESPESVIARTRKENDLGVGIYQP >gi|289776635|gb|GG745509.1| GENE 498 533931 - 535106 1499 391 aa, chain + ## HITS:1 COG:ECs0700 KEGG:ns NR:ns ## COG: ECs0700 COG0654 # Protein_GI_number: 15829954 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 607 79.0 1e-173 MTIHATDVAIVGGGMVGGALALGLAQQGFTVTVLEKTAPPAFDPASAPDVRISAISAASV GLLKSLGVWDAVRAMRVHAYRRLETWEWESAHVAFDAAELKLPELGYMVENKVLQWGLWQ ALAAHEGVTLRVGSELEAMQRGEAHTALHLREGEAIHARLVIGADGANSQVREMAGIGVH AWQYQQSCMLISVECVDDPGDSTWQQFTPSGPRAFLPLFDHWASLVWYDTPARIRQLQGM TMAQLQQEIASHFPARLGRVTPQAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQG VNLGYRDVDALLEILAQARGRGEDWASLPVLKRYQARRRADNFIMQSGMDLFYAGFSNDL APVRMLRNIGLMAAERAGVLKRQALKYALGL >gi|289776635|gb|GG745509.1| GENE 499 536213 - 537877 2415 554 aa, chain - ## HITS:1 COG:STM0680 KEGG:ns NR:ns ## COG: STM0680 COG0367 # Protein_GI_number: 16764050 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Salmonella typhimurium LT2 # 1 554 1 554 554 1109 95.0 0 MCSIFGVLDIKTDAGELRKKALELSRLMRHRGPDWSGVYASDKAILAHERLSIVDVNAGA QPLYNAEKTHALAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQG MFAFALYDSEKDAYLIGRDHIGIIPLYMGHDEHGNFYVASEMKALVPVCRTIKEFPAGSY LWSKDGEIRQYYQRDWFDYDAVKDNVTDKNELRQALEESVKSHLMSDVPYGVLLSGGLDS SVISAITKKFAARRVEDQERSEAWWPQLHSFAVGLEGSPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY FHKAPNAKELHEETVRKLQALHMFDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQD KMCGNGKMEKHVLRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAKQISDQQLET ASFRFPYNTPTSKEGYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKTMND PSGRAVGVHQSAYK >gi|289776635|gb|GG745509.1| GENE 500 538156 - 538908 1060 250 aa, chain - ## HITS:1 COG:ECs0705 KEGG:ns NR:ns ## COG: ECs0705 COG0647 # Protein_GI_number: 15829959 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 249 1 249 250 492 92.0 1e-139 MTIQNIICDIDGVLMHDNVAVPGAAEFIKRILDKGMPLVMLTNYPSQTGQDLANRFATAG IDVPDTAFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR SFNWEMMHKAAFFVANGARFIATNPDTHGRGYYPACGALCAGIEKISGRKPFYVGKPSPW IIRSALNKMQAHSEQTVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWI YPSVAEIDIF >gi|289776635|gb|GG745509.1| GENE 501 539037 - 540257 278 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 155 395 71 317 323 111 29 7e-23 MTAGGQAQIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERG LIKEVDQQASTGGRRAISIIAETRNFNAIGVRLGRYDATLTLYDLSSKTLEEEHFPLPER TQETLEHALLNIIATFIENCQRKIRELIAISVILPGLVDPESGVIRYMPHIAVENWGLVG ALEKRFNVTCYVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG NVGEIGHIQVDPLGERCHCGNFGCLETVAANAAIEQRVRHLLEQGYQSRLTPDDCTIKTI CKAANKGDALACEVIEYVGRHLGKTIAIAINLFNPQKIVVAGEIVEAEKVLLPAIEGCIN AQALKAFRKNLPVVRSTLDHRSAIGAFALVKRAMLNGTLLQRLLES >gi|289776635|gb|GG745509.1| GENE 502 540266 - 541414 1499 382 aa, chain - ## HITS:1 COG:ECs0707 KEGG:ns NR:ns ## COG: ECs0707 COG1820 # Protein_GI_number: 15829961 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 694 86.0 0 MYALTQGRIYTGHEILDDHAVVIADGLIERLCPLADLPSDMEQRSVNGAIIAPGFIDVQL NGCGGVQFNDSPEAVTVETLEIMQKANERSGCTSFLPTLITSSDDLMKQGIRVMREYLQK HPNQALGLHLEGPWLNIVKKGTHNPDYVRKPDAALVDFLCDNADVITKVTLAPERVEPEV IRKLVAAGIVVSAGHSNATLKEAKVGFRAGITFATHLYNAMPYITGREPGLAGAIFDEPD VYCGIIVDGMHVDYANVRNAKRLKGDKLCLVTDATAPAGANIDQFIFAGKTIYYRNGLCV DENGTLSGSSLTMIEGVRNLVEHCGVALDEVLRMATLYPARAIGVDKQLGSIAPGMVANL TAFTRDYKITKTIVNGNEVVTE >gi|289776635|gb|GG745509.1| GENE 503 541528 - 542328 1013 266 aa, chain - ## HITS:1 COG:STM0684 KEGG:ns NR:ns ## COG: STM0684 COG0363 # Protein_GI_number: 16764054 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Salmonella typhimurium LT2 # 1 266 1 266 266 534 96.0 1e-152 MRLIPLVTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPLTAYKALVEMHKAGQ VSFKHVVTFNMDEYVGLPKEHPESYHSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRR YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDGDVDL VPKYALTVGVGTLLDAEEVMILVLGHQKALALQAAVEGNVNHMWTITSLQLHPKAVIVCD EPSTMELKVKTLKYFNELEAENIKGL >gi|289776635|gb|GG745509.1| GENE 504 542644 - 544599 2254 651 aa, chain + ## HITS:1 COG:STM0685_1 KEGG:ns NR:ns ## COG: STM0685_1 COG1263 # Protein_GI_number: 16764055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 676 93.0 0 MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVPFIAQAGGAIFDNLALIFAIGV ASSWSKDNAGSAALAGAVGYFVMTKAMVTINPEINMGVLAGIITGLVAGAVYNRWAGIKL PDFLSFFGGKRFVPIATGFFCLILAAIFGYVWPPVQHAIHSGGEWIVSAGALGSGIFGFI NRLLIPTGLHQVLNTIAWFQIGEFTNAAGAVFHGDINRFYAGDGTAGMFMSGFFPIMMFG LPGAALAMYLAAPKARRPMVGGMLLSVAITAFLTGVTEPLEFLFMFLAPLLYLLHAVLTG ISLFIATALGIHAGFSFSAGAIDYVLMYSLPAASKNVWMLLVMGVVFFFVYFLLFSAVIR MFNLKTPGREDKAADVVTEEANSNTEEGLTQLATSYIAAVGGTDNLKAIDACITRLRLTV GDSAKVNDAACKRLGASGVVKLNKQTIQVIVGAKAESIGDEMKKVVTRGPVAAAAAAPAG NVATAAPAAKPQAVANAKTVESLVSPITGDVVALEQVPDEAFASKAVGDGIAVKPTSNIV VAPAAGTVVKIFNTNHAFCLETNNGAEIVVHMGIDTVALEGKGFKRLVEEGTDVKAGEPI LEMDLDFLNANARSMISPVVCSNSDDYSALVILASGKVVAGQTPLYEIKGK >gi|289776635|gb|GG745509.1| GENE 505 544778 - 546445 2471 555 aa, chain + ## HITS:1 COG:STM0686 KEGG:ns NR:ns ## COG: STM0686 COG0008 # Protein_GI_number: 16764056 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Salmonella typhimurium LT2 # 1 555 1 555 555 1113 94.0 0 MSEAEARPTNFIRQIIDEDLATGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQG QCNLRFDDTNPVKEDIEYVESIKNDVQWLGFHWSGDVCYSSDYFDQLHQYAVELINKGLA YVDELSPDEIREYRGTLKAPGKNSPYRDRSVEENLALFEKMRSGGFEEGKACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNISIPVHPRQYEFSRLNLEYTVMSKRKLNQLVTEKHVEGWDDPRMPTISGLRRR GYTAESIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG ESEMVAMPNHPNKPEMGSREVPFSAEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK AERVEKDAKGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSV PNPGAEEDFLAVINPDSLVIKQGYAEPSLAQAEAGKAYQFEREGYFCLDSRYANASSLVF NRTVGLRDTWAKVGE >gi|289776635|gb|GG745509.1| GENE 506 546499 - 546690 109 63 aa, chain - ## HITS:1 COG:no KEGG:KPK_3871 NR:ns ## KEGG: KPK_3871 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 63 1 63 63 114 100.0 1e-24 MSFCYSLIPDNFVMEVIAKSGKNRRTESDYIGFLYMTGNIRSAIYYRAVTGLIRIAKMKS LIG >gi|289776635|gb|GG745509.1| GENE 507 546882 - 548285 2087 467 aa, chain + ## HITS:1 COG:no KEGG:KPK_3870 NR:ns ## KEGG: KPK_3870 # Name: not_defined # Def: outer membrane porin, OprD family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 467 1 467 467 873 100.0 0 MRTFSGKRSTLALAIAAVTAMSGWVVVPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDG DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAY DEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF DYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGY KVADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG AMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPDYRLKESAYSLDALYTVQEGR AKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF >gi|289776635|gb|GG745509.1| GENE 508 548333 - 548665 346 110 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3670 NR:ns ## KEGG: Kvar_3670 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 110 1 110 110 193 100.0 2e-48 MKKMLLIAMMASGLVACATSPAPKEDTKLKDAYSACINTAEGNPDKIEACQSVLNVLKED KQHQQFANQESVRVLDYQQCIQATRTGNDQAVKARCDQIWKEIRSNNTTH >gi|289776635|gb|GG745509.1| GENE 509 548717 - 550012 1704 431 aa, chain - ## HITS:1 COG:STM0689 KEGG:ns NR:ns ## COG: STM0689 COG0477 # Protein_GI_number: 16764059 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 2 430 5 433 434 707 89.0 0 MTQQSTRAGTVGAILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFAALMLTFAVFG SGFLMRPIGAVVLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGVLAPILVLVG RLLQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVMAALIGYALNATLEHE EIADWGWRIPFFIGCLIIPLIFVLRRSLQETEEFLQRKHRPDTKEILTTIARNWRIITAG TLLVAMTTTTFYFITVYTPTYGRAVLHLSARDSLLVTMLVGISNFIWLPIGGAISDRIGR RPVLMGITVLALLTTWPVMHWLTAAPDFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPVY VRTVGFSLAFSLATAIFGGLTPAISTALVELTGDKSAPGWWLMCAALCGFIATALLFVRL SRGYQPAESQR >gi|289776635|gb|GG745509.1| GENE 510 550068 - 551207 1321 379 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3668 NR:ns ## KEGG: Kvar_3668 # Name: not_defined # Def: CitB domain protein # Organism: K.variicola # Pathway: not_defined # 1 379 1 379 379 727 98.0 0 MKSLEKLIIEAQIITEPEAEVERVMQVCNACRYCEGFCAVFPAMTQRLAFGKADINYLAN LCHNCGACLHACQYAPPHEFAINVPKAMAEVRLETYQHYAQPAAFGSLYRRAGVTTVLAL VGGLIFFLLLAMGLKGSLLHSPLAGDFYQIFPHNLLAWMFGSVFVLAFGLLMTGVIRFWR EISPGQPHAVDIAKASQDALTLKYLDGGHGKGCNEADDAFTPLRRRFHHFTFYGFMLCFA ATVVATGYHYFAGQEAPYPFFSFPVLLGTLGGIGLLVGPAGLLWLNLRRSPLHGDARQKP MDRGFILLLLLTSFTGLALLAGRDTSWMGILLAVHLGVVMALFLTLPYGKFAHGFYRCAA LLKWAIEKRRGKQAAVAGD >gi|289776635|gb|GG745509.1| GENE 511 551194 - 552597 1794 467 aa, chain - ## HITS:1 COG:STM0691 KEGG:ns NR:ns ## COG: STM0691 COG1053 # Protein_GI_number: 16764061 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Salmonella typhimurium LT2 # 1 467 1 467 467 873 89.0 0 MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLV DSYPEEEYWQDLLRVTEGNTNEALARLVIRTSSQCRDWMRQHGVNFQPPLSGALHVARTN AFFMGGGKALVNAYYRSAEQMGVQIRYNTPVQALELRNGEFVAALAGEERIVAKSCVLAA GGFESNREWLREAWGQNDRGEWPADNFLIRGTRFNQGVLLKFMIDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGVVVNRDADRFYDEGEDFWPKRYAIWGRLVAHQPGQIG YSIIDSKAIGHFMPPVFPGAQANTLPELARQLGLDSERFTQTIADYNAACAPGQFDHTRL DNCATAGLTPPKTHWARPIDTPPYYGYALRPGITFTYLGLYVDDTAAVHFAGKPSRNLFV AGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGQQAARAAQQEKHHEVA >gi|289776635|gb|GG745509.1| GENE 512 552695 - 553621 892 308 aa, chain - ## HITS:1 COG:STM0692 KEGG:ns NR:ns ## COG: STM0692 COG0583 # Protein_GI_number: 16764062 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 308 1 308 308 486 83.0 1e-137 MELRQLRYFVRIVETGSMGRAALDLNIGVSALSQQIARLENELAIRLLQRTSRGVTPTSA GLAFYSQAQLALRHADDAILAAREARLSGHVSVGMAPSTASVLGVPFINAMRESYPDVRL HLVESLSGNLERMINTRQLDLAIVFQQEKILRWSARPVLEERLFLIGTHALLAPLQEDHI SPDQLTSLPLIMPSQGHGLRGRLEAVCQQHHLSVEVVADIDGLALLMQAVRSGLGATLQP GAAISHLDHQALRVIDVVNPILSRPNFLVSLSDDELTPAGLAARVILSKVMRQLVESDRW PGATLYAH >gi|289776635|gb|GG745509.1| GENE 513 553749 - 554201 600 150 aa, chain - ## HITS:1 COG:STM0693 KEGG:ns NR:ns ## COG: STM0693 COG0735 # Protein_GI_number: 16764063 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Salmonella typhimurium LT2 # 1 150 1 150 150 272 96.0 2e-73 MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIELRQREIASRHGI RLTNHSLYLYGHCAEGDCREDEHAHDAVEK >gi|289776635|gb|GG745509.1| GENE 514 554493 - 555023 730 176 aa, chain - ## HITS:1 COG:ECs0715 KEGG:ns NR:ns ## COG: ECs0715 COG0716 # Protein_GI_number: 15829969 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 338 96.0 4e-93 MAIIGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAHDILLLGIPTWYYG EAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW PTAGYHFEASKGLADDDHFVGLAIDEDRQPELTNERVEKWVKQVAEELHLEEIKNA >gi|289776635|gb|GG745509.1| GENE 515 555175 - 555468 425 97 aa, chain - ## HITS:1 COG:no KEGG:c0772 NR:ns ## KEGG: c0772 # Name: ybfE # Def: LexA regulated protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 97 24 120 120 137 90.0 1e-31 MAKEQTDRTTLDLFANERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAD AVDALNELAEARNMSRSDLIEEMLMTQLRALHSQGKV >gi|289776635|gb|GG745509.1| GENE 516 555602 - 556375 968 257 aa, chain - ## HITS:1 COG:ybfF KEGG:ns NR:ns ## COG: ybfF COG0596 # Protein_GI_number: 16128662 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 252 1 252 254 435 85.0 1e-122 MKLNSRAQSAQNPHNHSPIVLVHGLFGSLDNLGILARDLIADHDIVQVDMRNHGLSPRSP EMTYPAMAQDLLDTLDAHQIERATFIGHSMGGKAVMALTALAPERISGLVAIDIAPVDYH VRRHDEIFAAIRAVSESSANSRQQAAQVMREHLREEGVIQFLLKSFVDGEWRFNVPVLWD QYPHIVGWETIPAWPHPTQFIPGGNSPYVTDAYRDALLAQFPQARAHVIAGAGHWVHAEK PEAVLRAIRRYLTSIAA >gi|289776635|gb|GG745509.1| GENE 517 556559 - 557107 406 182 aa, chain + ## HITS:1 COG:STM0697 KEGG:ns NR:ns ## COG: STM0697 COG3057 # Protein_GI_number: 16764067 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Salmonella typhimurium LT2 # 1 182 1 180 180 293 83.0 8e-80 MKTIEVDDELYRYIASHTLHIGESASDILRRMLKFSAVSQPATPVSKAAPALAPAPAVEM KPANPAKDKVRAMRELLLSDEYAEQKRAVNRFMLVLTTLYSLDNKAFAEATESLHGRTRV YFAEDARTLLKSGNQTKPKQVPGTPWWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCG TI >gi|289776635|gb|GG745509.1| GENE 518 557140 - 558780 2316 546 aa, chain + ## HITS:1 COG:STM0698 KEGG:ns NR:ns ## COG: STM0698 COG0033 # Protein_GI_number: 16764068 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Salmonella typhimurium LT2 # 1 546 1 546 546 1053 95.0 0 MAIDKRAGQPAQQSDLINVAQLTAQYYVLKPEVGNAEHAVKFGTSGHRGSAARHNFNEPH ILAIAQAIAEDRAKNGITGPCYVGKDTHALSEPAFISVLEVLTANGVDVIVQENNGFTPT PAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVENRANEL LAAGLQGVKRISLDAALASGHVKEQDLVQPFIEGLADIVDMAAIQKAGLTLGVDPLGGSG IEYWKRIGEHYKLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKEVAVGKTLVSSAMIDRVVN DLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE ITAVTGKNPQEHYNELAERFGAPSYNRLQASATSAQKAALSKLSPEMVSADTLAGDPITA RLTAAPGNGAAIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKLIEKEAVEIVS EVLKNA >gi|289776635|gb|GG745509.1| GENE 519 558835 - 559272 356 145 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3659 NR:ns ## KEGG: Kvar_3659 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 145 1 145 145 231 100.0 8e-60 MKIQRKSLFLFWAWMDLFFVLQFLWWNIAHRRLPFYDDLLAYLQLLHTYGSGAVWLYPLN VLLIISIPLSMILFFRQSRYALWLAWGQAPLRLVFMQPSLSLGLWLIQAAGVRHVAILAG FLLLSEGLKIASLWYCRGGAQGIKR >gi|289776635|gb|GG745509.1| GENE 520 559254 - 559856 844 200 aa, chain - ## HITS:1 COG:kdpE KEGG:ns NR:ns ## COG: kdpE COG0745 # Protein_GI_number: 16128670 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 199 26 224 225 335 84.0 3e-92 MRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDGIDFIRDLRQWSQMPIIVLSARSEEH DKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQADEPVVRFADLEVNIPARRILR GSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEA DPARPQHLLTETGIGYRFMP >gi|289776635|gb|GG745509.1| GENE 521 559928 - 562615 3291 895 aa, chain - ## HITS:1 COG:ECs0723 KEGG:ns NR:ns ## COG: ECs0723 COG2205 # Protein_GI_number: 15829977 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Escherichia coli O157:H7 # 1 895 1 894 894 1488 83.0 0 MSDEPLRPDPDRLLQHTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDILIGVA ETHGRKETAAMLEGLSTLPPRRLAHRGRYVYEFDLDAALARRPALILVDELAHSNAPGSR HPKRWQDVDELLEAGIDVFTTVNVQHLESLNDVVSGITGVQVRETVPDPFFDAADDVVLV DLPPDDLRQRLNEGKVYIGGQAERAIENFFRKGNLIALRELALRRTADRVDEQMRAWRDR QGQEKVWHTRDAILLCIGHNTGSEKLVRAAARLAARLGSVWHAVYVETPSLHRLPEARRR AILAALRLAQELGAETATLSDPSEEKAVLHYAREHNLGKIVIGRQRKRRWWDRSGFADRL ARHAPDLDLVVIALDEKPSPLPARANDSRTALEKWRLQLQGCAVAVALCAIITLVAMQWL MAFEAANLVMLYLLGVVIIALVYGRWPSVLATVINVISFDLFFVAPRGTLAVSDVQYLLT FGVMLTVGLLIGNLTAGVRYQARVARYRERRTRHLYEMSKALAVGRSQQDIATTSERFIA STFQARSQLLLPDAQGKLLPLTHQPGLTAWDDAIARWSFDKGQPAGAGTDTLPGVPYQIL PLKSAARTWGLLVVEPENLRQLMIPEQQRLLETFTLLVASALERLTLTASEEQARLTSER ESLRNSLLAALSHDLRTPLTVLFGQAEILTLDLASEGSKHAPQANEIRQHVLNTTRLVNN LLDMARIQSGGFNLHKEWLTLEEVVGSALRMLEPSLGGQHIQLDLPDPLQLVHVDGPLFE RVLINLLENAHKYAGARANIGIRAEADARQLSLEVWDNGPGIPAGQEQAIFDKFARGNKE SAIPGVGLGLAICQAIVDVHGGTISASNRPEGGASFRVTLPGETPPELEELPEEL >gi|289776635|gb|GG745509.1| GENE 522 562616 - 563191 784 191 aa, chain - ## HITS:1 COG:kdpC KEGG:ns NR:ns ## COG: kdpC COG2156 # Protein_GI_number: 16128672 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Escherichia coli K12 # 1 190 1 190 190 237 71.0 9e-63 MSLIRPALVLFILLTLLTGGVYPLLTTSLGQWWFNSQANGSLIRLNDEVRGSGLIGQNFT AAGYFQGRPSATAETADNPMASGGSNLAASNPALDKAVSERVQALRAANPDADPRVPVEL VTTSASGLDNNLTPAAALWQVPRVAKARQLSVEQVSQLVNQATQTPLLSFLGQPVVNILQ LNMALDALKDK >gi|289776635|gb|GG745509.1| GENE 523 563202 - 565250 2937 682 aa, chain - ## HITS:1 COG:ECs0725 KEGG:ns NR:ns ## COG: ECs0725 COG2216 # Protein_GI_number: 15829979 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1137 89.0 0 MSRKQLALLEPTLVRQALLDAVKKLSPMVQWRNPVMFIVWVGSLLTTLLAIAMAGGALTG SATFTAAVSIWLWFTVLFANFAEAMAEGRSKAQANSLKGVKKTAFARKLRAPQHDATVDH VPAEDLRKGDVVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGT RILSDWLVIRCSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTLVFLLATATIW PFSAWSGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD VDVLLLDKTGTITLGNRQASAFLPARGVEERTLADAAQLSSLADETPEGRSIVVLAKQRF NLRERDLQSLHATFVPFTAQTRMSGINIDQRMIRKGSVDAIRRHVEANGGHFPADVDKQV EEVARQGATPLVVAEGEKVLGIISLKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQ AAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAAVYP QLAMLNVMGLHSPSSAILSAVIFNALIIVFLIPLALKGVSYRPLSASAMLRRNLWIYGLG GLLVPFIGIKAIDLLLTLSGLV >gi|289776635|gb|GG745509.1| GENE 524 565271 - 566950 2431 559 aa, chain - ## HITS:1 COG:STM0706 KEGG:ns NR:ns ## COG: STM0706 COG2060 # Protein_GI_number: 16764076 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Salmonella typhimurium LT2 # 1 558 1 558 559 814 82.0 0 MAAQGFLLLASYLLVLLVLARPLGTCLARMVNDIPLPGLAGVERVLWRVAGIRAEEMGWL QYLLAILLFNALGGLALFALLMLQGVLPFNPQHLPGLSWDLALNTAVSFVSNTNWQAYAG ESTMSYLSQMVGLTVQNFLSAATGIAVVFALTRAFARQKMSALGNAWVDLTRITLWLLLP LSLLVALFFIQQGVPQNLLAYQPFTTLEGAHQLLPMGPVASQEAIKLLGTNGGGFFNANS AHPFENPTALTNLVQMLAIFLIPAALCFAFGEVVSDRRQGRAILWAMTLIFILCVAVVMW AETRGNPHLLTLGADSSLNMEGKESRFGILASSLFAVITTAASCGAVNAMHDSFTALGGM VPMWLMQIGEVVFGGVGSGLYGMLLFVMLAVFIAGLMVGRTPEYLGKKIDVREMKMIALA ILVTPTLVLLGTALAMMTDAGRAGMFNPGPHGFSEVLYAVTSAANNNGSAFAGLGAATPF WNLLLAFCMLVGRFAVIIPVMAIAGSLVAKKIQPASPGTLATHDALFIGLLIGTVLLVGA LTFIPALALGPLAEHFSLL >gi|289776635|gb|GG745509.1| GENE 525 567350 - 567556 381 68 aa, chain + ## HITS:1 COG:no KEGG:CKO_02461 NR:ns ## KEGG: CKO_02461 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 68 34 101 101 108 77.0 8e-23 MALYKAYPAHIILLRRAFAVVAGVAALPVMLFWKDRARYYSWLHRVWSKTSEQPVWMAQA EKAAHDFY >gi|289776635|gb|GG745509.1| GENE 526 567741 - 568229 530 162 aa, chain + ## HITS:1 COG:STM0709 KEGG:ns NR:ns ## COG: STM0709 COG0415 # Protein_GI_number: 16764079 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Salmonella typhimurium LT2 # 1 160 1 160 473 239 70.0 2e-63 MATHLVWLRTDLRIHDNLALAAACRDPQAQVLALYIATPGQWREHHLAPRQAAFIVSHLH SLHTALAERGIPLWVEEADDFTASVERLAHFCQQHQVSHLFYNYQYEFNERQRDAAVENT LRDVICQGFDDSVLLPPGSVMTGSGEMYKVFTPFKNAFIRPS >gi|289776635|gb|GG745509.1| GENE 527 568518 - 569267 641 249 aa, chain + ## HITS:1 COG:ECs0733 KEGG:ns NR:ns ## COG: ECs0733 COG0415 # Protein_GI_number: 15829987 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Escherichia coli O157:H7 # 1 240 232 471 472 405 79.0 1e-113 MEGTSRLSPCLATGVLSPRQCLHRLLTEHPAALDGGAGATWLNELIWREFYRHLMVYYPK LCKGRPFIAWTDKVAWREDDAALQAWQRGETGFPIVDAAMRQLNATGWMHNRLRMIVASF LTKDLRLDWRAGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDK QGVFMRRWLPELAKVPEKALHQPWAWADKQGIKLDYPRPIVDHKQARQETLAAWEAARKG ITPPPDGGS >gi|289776635|gb|GG745509.1| GENE 528 569239 - 570717 2289 492 aa, chain - ## HITS:1 COG:STM0710 KEGG:ns NR:ns ## COG: STM0710 COG3104 # Protein_GI_number: 16764080 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 492 1 492 493 807 87.0 0 MKTTSSQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYALFSAYCSLVYV TPILGGYLADKLLGNRMAVMLGALLMAIGHLVLGASETAPVFLYLSLAIIVCGYGLFKSN VSCLLGELYEPADPRRDGGFSLMYASGNIGSIIAPIACGYVQEEYSWAMGFALAAIGMVA GLVIFLCGNRHFQHTAGVNRQALCARRFLLPNWGWLLVLLVTAPLLIAVLFWQEWSVYAL IVATVIGLAVLARIYLRAETDKQRKDLRLIVVLTAFSLLFWAFAQQGGSSISLYIDRFVN RHIMSYEVPTAMFQSVNAFAVMLCGMVLAWLVKESVGGNRTVRIWGKFALGLGLMSAGFC ILTLSARWSAAYGQSSMPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML LSGAIANYLAGVIADQTSQASFDAAGAVNYSIDAYIKVFSQITWGALACVGVVLVIWLYH SLKVRTRRLAVE >gi|289776635|gb|GG745509.1| GENE 529 570986 - 571729 926 247 aa, chain + ## HITS:1 COG:STM0711 KEGG:ns NR:ns ## COG: STM0711 COG0327 # Protein_GI_number: 16764081 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 247 1 247 247 469 93.0 1e-132 MKNSELEQLINDKLNSAAISDFAPNGLQVEGRDTVQTIVTGVTASQALLDEAVRLQADAV IVHHGYFWKNESPVIRGMKRRRLKTLLANDINLYGWHLPLDAHPELGNNAQLAHLLGINV LGEIEPLVPWGELSMPVSGLELASWIEARLGRKPLWCGDTGPDTVSRVAWCTGGGQSFID AAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLTETTDLDVTF IDIPNPA >gi|289776635|gb|GG745509.1| GENE 530 571744 - 572175 430 143 aa, chain + ## HITS:1 COG:STM0712 KEGG:ns NR:ns ## COG: STM0712 COG2049 # Protein_GI_number: 16764082 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Salmonella typhimurium LT2 # 1 140 1 140 218 219 78.0 1e-57 MQRARCYLLGETAVVLELEPPVTLESQQRIWGLAQRLSHHEEVVDAIPGMNNITVVLRRP QEMAWEAIDRLQRWWEESLALEPESRSLTIPVVYGGEAGPDLGVVAQHSGLSEKQVVELH ASVEYLVWFIGFQPGFPYLGLAS >gi|289776635|gb|GG745509.1| GENE 531 572323 - 572493 224 56 aa, chain + ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 56 163 218 218 95 78.0 2e-20 MGIGGAQTGIYPLATPGGWQLLGRTALTLFDPARKEPALLRVGDKIRFVPQKEGVC >gi|289776635|gb|GG745509.1| GENE 532 572487 - 573419 1205 310 aa, chain + ## HITS:1 COG:ECs0737 KEGG:ns NR:ns ## COG: ECs0737 COG1984 # Protein_GI_number: 15829991 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 499 79.0 1e-141 MLTLIRAGLYTSVQDGGREGLRQSGISRCGALDYPSLVIANLLVGNEANAAGLEITLGQV EIEFARSGWFALTGAACEATLDGKAVWVGWRTAYRAGQRLVLKTPQHGIRSYLAVAGGVA VPVVLGSRSTDLKAGIGGLEGRRLQDGDQLKLGKAARRFTTSRGVKQLPLGNRIRALPGP EYHEFDAASQASFWRSPWQLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFVACSLEEALKARADRQRYLE QLAWRLHDDD >gi|289776635|gb|GG745509.1| GENE 533 573409 - 574161 1003 250 aa, chain + ## HITS:1 COG:ECs0738 KEGG:ns NR:ns ## COG: ECs0738 COG1540 # Protein_GI_number: 15829992 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 353 77.0 2e-97 MMIDLNADLGEGGANDSALLQLVSSANIACGFHAGDAGLMVQSVREALKYGVAVGAHPGY PDRENFGRTAMDLPPETVYAQMLYQIGALAAIVQAQGGELQHVKPHGMLYNQAAKSPPLA DAIARAIRDVNPKLVLVGLAGSELIRAGQHYGLTTRQEVFADRGYLADGSLVPRSQPGAL IDSEEQALAQTLEMVQHHRVRSISGEWANVVAQTVCLHGDGPHALDFARRLRAAFAGRHI LVSAQLDAEA >gi|289776635|gb|GG745509.1| GENE 534 574191 - 574835 656 214 aa, chain + ## HITS:1 COG:YPO2703 KEGG:ns NR:ns ## COG: YPO2703 COG2039 # Protein_GI_number: 16122907 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Yersinia pestis # 1 214 1 215 215 277 65.0 1e-74 MAGVLLTGFEPFDGETVNPSWEVVKQLDGTMIAGQPVIARQLPCVFGEALSVLYAAIEDL QPRLVIAVGQAGGRVDISVERVAINVDDARIPDNKGQQPVDTPIVDGGPAAWFSTLPIKA IVSALRDRGIPASVSQTAGTFVCNHVMYGLLHKLQEQAGVRGGFIHIPWLPAQAAAHPGE PSMATVTVREALETAIAVALRQSVDSKLGGGATH >gi|289776635|gb|GG745509.1| GENE 535 574851 - 575642 906 263 aa, chain + ## HITS:1 COG:nei KEGG:ns NR:ns ## COG: nei COG0266 # Protein_GI_number: 16128689 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli K12 # 1 263 1 263 263 451 81.0 1e-127 MPEGPEIRRAADKLEAAIKGEPLTDAWFAFPQLQPYQSLLIGQRVTHIATRGKALLTHFS GGLTLYSHNQLYGVWRVVDAGEQPASNRVLRVRLQTARKAILLYSASDIEMLTAEQVAHH PFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGLLLDQAFLAGLGNYLRVEILWQVG LSGKRKAAELSDSQLDALAHALLAIPRLSYHTRGQADDNKHHGALFRFKVFHRDGERCER CGGVIEKTTLSSRPFYWCPGCQH >gi|289776635|gb|GG745509.1| GENE 536 575709 - 576992 1599 427 aa, chain - ## HITS:1 COG:STM0730 KEGG:ns NR:ns ## COG: STM0730 COG0372 # Protein_GI_number: 16764100 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 867 95.0 0 MSDAKAKITLGGDTAIELDVLKGTLGQDVIDIRSLGSKGVFTFDPGFTSTASCESKITFI DGDEGILLHRGFPIDQLATESNYLEVCYILLYGEKPTQAEYDEFKTTVTRHTMIHEQITR LFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAYRLLSKMPTMAAMCYKYS IGQPFVYPRNDLSYAGNFLRMMFATPCEEYEVNPVLERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVEHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLQVAMELEHIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWNEMHSDGMKIARPRQLYTGYTKRD YQSDIKR >gi|289776635|gb|GG745509.1| GENE 537 577633 - 578037 201 134 aa, chain + ## HITS:1 COG:ECs0746 KEGG:ns NR:ns ## COG: ECs0746 COG2009 # Protein_GI_number: 15830000 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Escherichia coli O157:H7 # 6 134 1 129 129 206 93.0 9e-54 MWALFMVRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSP EGFLTAASIMDSFFVKFIMWGILTALAYHVVVGIRHLMMDFGYLDETLEAGKRSAKISFV ITVVLSLLAGVLVW >gi|289776635|gb|GG745509.1| GENE 538 578031 - 578378 503 115 aa, chain + ## HITS:1 COG:STM0733 KEGG:ns NR:ns ## COG: STM0733 COG2142 # Protein_GI_number: 16764103 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 140 88.0 5e-34 MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATTGEISWEVWTGFFASGFTKVF TLLALVSILIHAWIGMWQVLTDYVKPLALRLVLQLAIVVALVAYVLYGFVVVWGV >gi|289776635|gb|GG745509.1| GENE 539 578378 - 580144 2275 588 aa, chain + ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1142 98.0 0 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNS HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ ESIAEQGTLRDASESDVEGSLDRLNRWNNTRSGEDPVEIRKALQECMQHNFSVFREGDAM HKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAFATAVSANFRTESRGAH SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY >gi|289776635|gb|GG745509.1| GENE 540 580160 - 580876 664 238 aa, chain + ## HITS:1 COG:ECs0749 KEGG:ns NR:ns ## COG: ECs0749 COG0479 # Protein_GI_number: 15830003 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 486 97.0 1e-137 MKLEFSIYRYNPDVDDAPHMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVC GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR FLIDSRDTETSERLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA >gi|289776635|gb|GG745509.1| GENE 541 581260 - 584067 3244 935 aa, chain + ## HITS:1 COG:ECs0751 KEGG:ns NR:ns ## COG: ECs0751 COG0567 # Protein_GI_number: 15830005 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 935 1 933 933 1837 93.0 0 MQNGAMKAWLDSSFLSGSNQSWIEQLYEDFLTDPDSVDANWRSMFQQLPGTGVKPDQFHS KTRDYFRRLAKDASRYTSSISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWKQERV ADLDPAYHDLTEADFQDSYNVGSFAIGKDTMKLGDLIAALKQTYCGSIGAEYMHITSTEE KRWIQQRIESVAGKASFTAAEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPM LKEMIRHAGKSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYH MGFSSDMETEGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDA AVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAP IFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIK KHPTPRKIYADKLEQEKVATLEDATEQVNLYRDALDAGECVVEEWRPMNMHSFTWSPYLN HEWDESYPDKVDPKRLQELAKRISTVPEGIEMQSRVAKIYGDRQLMAAGEKLFDWGGAEN LAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHVHNGQGQFRVWDSV LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP KSLLRHPLAVSSMDELANGTFMPAIGEIDELDPQAVKRVVLCSGKVYYDLLEQRRKNEQK DVAIVRIEQLYPFPHQAVQEALKAYSHVHDFVWCQEEPLNQGAWYCSQHHLREVVPFGAS LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVD >gi|289776635|gb|GG745509.1| GENE 542 584082 - 585308 1550 408 aa, chain + ## HITS:1 COG:STM0737 KEGG:ns NR:ns ## COG: STM0737 COG0508 # Protein_GI_number: 16764107 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 408 1 402 402 696 92.0 0 MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAV LEDEGATVLSRQILGRLREGNSAGKETSEKADAKASTPAQRQQASLEEQNNDALSPAIRR LLAEHNLDAVAIKGTGVGGRLTREDVEKHLAKAPVAAEAKAPAATAAATPAPQLGHRSEK RVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGDAFEKRHGIRLGFMSF YVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDLLGMADIEK NIKELAVKGRDGKLTVDDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMA VNGKVEILPMMYLALSYDHRLIDGRESVGFLVAIKELLEDPTRLLLDV >gi|289776635|gb|GG745509.1| GENE 543 585454 - 586620 1382 388 aa, chain + ## HITS:1 COG:STM0738 KEGG:ns NR:ns ## COG: STM0738 COG0045 # Protein_GI_number: 16764108 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 715 98.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV KVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYLGAVVDRSSRR VVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRELAFKLGLEGKQVQQFTKI FMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDP REAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKSLTDAAQQVVAAVEGK >gi|289776635|gb|GG745509.1| GENE 544 586620 - 587489 1109 289 aa, chain + ## HITS:1 COG:STM0739 KEGG:ns NR:ns ## COG: STM0739 COG0074 # Protein_GI_number: 16764109 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 289 1 289 289 506 99.0 1e-143 MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKGGTTHLGLPVFNTVREA VEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI GPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG DPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKAIIK >gi|289776635|gb|GG745509.1| GENE 545 588317 - 589885 2167 522 aa, chain + ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 522 2 523 523 954 93.0 0 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHMAVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA QVKFVHTVASGYVTGAMFILAISSWYMLKGRDFAFAKRSFAIAASFGMAAILSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQNAQTNHFAIQIPYALGIIATRSV DKPVIGLKDLMVQHEERIRNGMKAYALLEQLRAGSTDQAVRDQFNSVKKDLGYGLLLKRY TPNVADATEEQIAKATKDSIPSVAPLYFAFRIMVACGILMLLIIGASFWSVIRNRIGEKK WLLRAAFFGLPLPWIAVESGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMLLICG LYTLFLVAELFLMFKFARKGPSSLKTGRYHFEQSSAAIQSAR >gi|289776635|gb|GG745509.1| GENE 546 589901 - 591040 1690 379 aa, chain + ## HITS:1 COG:ECs0769 KEGG:ns NR:ns ## COG: ECs0769 COG1294 # Protein_GI_number: 15830023 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 645 88.0 0 MIDYEVLRFIWWLLIGILLIGFAVADGFDMGVGMLTRFLGRNDTERRIMINAIAPHWDGN QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDTRWRNMWD WGIFIGSFVPPLVIGVAFGNLLQGVPFHVDEYLRLFYTGNFFQLLNPFGLLAGIVSVAMI LTQGATYLQMRTVGELHLRTRTVSTVAALVTLVCFALAGVWVYYGIDGYVVKSVMDHSGP SNPLTKEVVREAGAWMVNFNNMPALWAVPALGVVLPLLTVVSTKADKGAWAFLFSSLTLA CIILTAGIAMFPFIMPSSTMLNASLTMWDATSSQRTLNLMTYVAIVFVPIILAYTSWCYW KMFGRITREDIEKNTHSLY >gi|289776635|gb|GG745509.1| GENE 547 591056 - 591169 160 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWYFAWILGTLLACAFGVITALALEHVEATKAGKEEH >gi|289776635|gb|GG745509.1| GENE 548 591300 - 591584 205 94 aa, chain + ## HITS:1 COG:STM0743 KEGG:ns NR:ns ## COG: STM0743 COG3790 # Protein_GI_number: 16764113 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 2 94 1 93 93 144 78.0 4e-35 MIKYMYAIMDKRPLRALSLLMALLLAGCIFWDPSRFAAKTSELEIWHGFLLMWAVCSGVI HGVGFRPRAVHWQGIFCPLIADIVLALGLFFFFF >gi|289776635|gb|GG745509.1| GENE 549 591848 - 592138 216 96 aa, chain + ## HITS:1 COG:STM0744 KEGG:ns NR:ns ## COG: STM0744 COG0824 # Protein_GI_number: 16764114 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Salmonella typhimurium LT2 # 1 96 39 134 134 173 95.0 8e-44 MLRHHHFSQQVLLAERVAFVVRKMTLEYFAPARLDDMLEVQTEITSMRGTSLVFTQRIVN AENTVLNEAEVLIVCVDPLLMKPRALPKSIVAEFKQ >gi|289776635|gb|GG745509.1| GENE 550 592135 - 592827 922 230 aa, chain + ## HITS:1 COG:ECs0772 KEGG:ns NR:ns ## COG: ECs0772 COG0811 # Protein_GI_number: 15830026 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 412 97.0 1e-115 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNSAAREAEAFEDKFWSGI ELSRLYQESQGRRDNLTGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTTSESNKG >gi|289776635|gb|GG745509.1| GENE 551 592831 - 593259 646 142 aa, chain + ## HITS:1 COG:STM0746 KEGG:ns NR:ns ## COG: STM0746 COG0848 # Protein_GI_number: 16764116 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Salmonella typhimurium LT2 # 1 142 1 142 142 196 85.0 1e-50 MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVKSND DPPVIVEVSGVGQYSVKVGQETLSQLPPEQVIAEAKRRLEANEKTVFLIGGAKDVPYDEI IKALNLLHSAGVKSVGLMTKPI >gi|289776635|gb|GG745509.1| GENE 552 593359 - 594696 970 445 aa, chain + ## HITS:1 COG:tolA KEGG:ns NR:ns ## COG: tolA COG3064 # Protein_GI_number: 16128714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli K12 # 1 444 1 421 421 210 61.0 4e-54 MSKATEQNDKLKRAIIISVALHIILIALLIWSSFDEHLDASAGGGGGSSIDAVMVDPGAV VNNYNRQQQQQASARRAAEQREKQAQQQAEELREKQAAEQERLKQLEQERLQAQEAAKEA KEQQKQAEEAAAKAAAAAKAKADAQAKEAQEAAAKAAADAKAKADAQAKAAELAAAKAAA DAKKQADAAAAKAAADAKKQAEAEAAKAAAEAQKKAEAAAAKKAQQEAEKKAQQEAAKQA AAEKAAAEKAAEKAAEKAAAQKAAAEKAAAEKAAAAEKAAAAKAAAAEKAAADKAAKAAA AKAAAAKKAAAAKEADGVDNLLGDLSSGKNAPKTGGGAKGNNASAAGSGNTKNSASGADI NNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGLLLNIQSEGGDPALCQAALAAARQ AKFPKPPSQAVYEVFKNAPLDFKPQ >gi|289776635|gb|GG745509.1| GENE 553 594826 - 596118 1288 430 aa, chain + ## HITS:1 COG:STM0748 KEGG:ns NR:ns ## COG: STM0748 COG0823 # Protein_GI_number: 16764118 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Salmonella typhimurium LT2 # 1 430 1 430 430 752 91.0 0 MKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAA DLRNSGKFNPLDRSRLPQQPTSAQEVQPAAWSALGIDAVVVGQVTSNPDGSYQVAYQLVD TGGAPGTTLAQGSFKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKNGGQFPY ELRVSDYDGYNQFLVHRSSQPLMSPAWSPDGSKLAYVTFESGRSALVVQTLANGAVRQIA SFPQHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQ NLAFTSDQAGRPQVYKVNINGGTPQRITWEGSQNQDADVSADGKTMVMVSSAGGQQHIAK QDLEAGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ VKSPAWSPYL >gi|289776635|gb|GG745509.1| GENE 554 596153 - 596677 631 174 aa, chain + ## HITS:1 COG:ECs0776 KEGG:ns NR:ns ## COG: ECs0776 COG2885 # Protein_GI_number: 15830030 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 174 1 173 173 279 95.0 2e-75 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQAR LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI ALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLVY >gi|289776635|gb|GG745509.1| GENE 555 596687 - 597487 542 266 aa, chain + ## HITS:1 COG:ECs0777 KEGG:ns NR:ns ## COG: ECs0777 COG1729 # Protein_GI_number: 15830031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 1 263 263 343 85.0 3e-94 MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ QQLSDNQTDIDSLRGQIQENQYQLNQIVERQKQILLQIDSLSSGGGAAAASGTQAPSSSG DQSAAATSAAPAASSGAPAMTGDANTDYNAAIALVKDASRQDDAMVAFQNFVKKYPDSTY QPNANYWLGQLNYNKGKKDDAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKA VYQQVISKFPGTDGAKQAQKRLNALG >gi|289776635|gb|GG745509.1| GENE 556 598936 - 599979 1079 347 aa, chain + ## HITS:1 COG:STM0756 KEGG:ns NR:ns ## COG: STM0756 COG0379 # Protein_GI_number: 16764121 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 633 89.0 0 MSVMFDPETAIYPFPAKPQPLTVDEKQFYREKIKRLLRERDAVMVAHYYTDPEIQQLAEE TGGCIADSLEMARFGARHSASTLLVAGVRFMGETAKILSPEKTILMPTLNAECSLDLGCP IEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGQKILWAPDRH LGRYVQRQTGADVLCWQGACIVHDEFKTQALTRMKALYPEAAVLVHPESPQAIVEMADAV GSTSQLIAAAKSLPQRQLIVATDRGIFYKMQQAVPEKTLLEAPTAGEGATCRSCAHCPWM AMNGLKAIAEGLEQGGAEHEIHVDEALRTGALIPLNRMLDFAATLRG >gi|289776635|gb|GG745509.1| GENE 557 600015 - 600734 925 239 aa, chain + ## HITS:1 COG:ECs0779 KEGG:ns NR:ns ## COG: ECs0779 COG3201 # Protein_GI_number: 15830033 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Escherichia coli O157:H7 # 1 238 1 238 239 355 86.0 4e-98 MDFFSTQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIWLASLEKISNYAFGLVNVTLFAI IFFQIQLYASLLLQLFFFAANVYGWYAWSRQSSNHEAELQIRWLPRSKALGWLAACVVAI GLLTLFINPFFAFLTRIAVSLMQALGLQVSMPVLQPDAFPFWDSCMTVLSVVAMILMTRK YVENWLLWVIVNVISVVIFARQGVYAMSLEYLLLTFIALNGSRMWINSARERGSHAFSG >gi|289776635|gb|GG745509.1| GENE 558 600731 - 601675 1027 314 aa, chain - ## HITS:1 COG:STM0758 KEGG:ns NR:ns ## COG: STM0758 COG1230 # Protein_GI_number: 16764123 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Salmonella typhimurium LT2 # 1 312 1 312 312 432 77.0 1e-121 MAHPHSHSPAQAPDSSNARRLRWAFIVTAGFMLIEAVGGAISGSLALLADAGHMLTDSAA LLFALLAVRFASRPPNTRHTFGWLRLTTLAAFLNAIALVVITILIVWEAIQRFQHPQPVA GVTMMVIAVAGLLANVLAFWILHRGSEEQNLNVRAAALHVLGDLLGSVGAIVAAVVILTT GWTPVDPILSVLVSCLVLRSAWRLLKESLNELLEGAPRSLDVAALQRDIRRSIPEVRDVH HVHVWLVGEKPVMTLHVQVVPPHDHDALLNRILHFLEHKYEIEHATVQMEYQPCSGPECH LNTMHAGHDHHHHH >gi|289776635|gb|GG745509.1| GENE 559 601794 - 602171 441 125 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3620 NR:ns ## KEGG: Kvar_3620 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 125 1 125 125 122 100.0 6e-27 MNMKKLTTLLLTATLGLASGAALAADTGAQSNNGQANSSADAGQVAPDARENVAPNNVDN NQINSGSGGTMLHPDGSTMSQDNMSSDEVHKNSMCKDGRCPDTGKKLDNGGSMNHDNSKT DGTTQ >gi|289776635|gb|GG745509.1| GENE 560 602456 - 603538 1360 360 aa, chain + ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 11 360 1 350 350 672 92.0 0 MNKYGNAGKKMNYQNDDLRIKEINELLPPVALLEKFPATENAANTVAHARKAIHQILKGD DDRLLVVIGPCSIHDPAAAKEYASRLLPLREALKGELEIVMRVYFEKPRTTVGWKGLIND PHMDNSFRINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYVADLMSWGAIGARTTESQ VHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCH IILRGGKEPNYSAKHVADVKIGLAKAGLPAQVMIDFSHANSSKQFKKQMEVGADVCQQIA GGERAIMGVMIESHLVEGNQSLEGGEPLTYGKSVTDACIGWEDTETILRQLAEAVKTRRG >gi|289776635|gb|GG745509.1| GENE 561 603612 - 604364 1220 250 aa, chain - ## HITS:1 COG:STM0772 KEGG:ns NR:ns ## COG: STM0772 COG0588 # Protein_GI_number: 16764136 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Salmonella typhimurium LT2 # 1 250 1 250 250 461 95.0 1e-130 MAVTKLVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKAEGFSFDFAYTSVL KRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFA VTPPELTKDDERYPGHDPRYAKLTDAELPTTESLALTIDRVVPYWNETILPRLKSGERVI IAAHGNSLRALVKYLDNMGEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNAEEIAAKA AAVANQGKAK >gi|289776635|gb|GG745509.1| GENE 562 604655 - 605698 331 347 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 25 345 27 343 345 132 28 5e-29 MVTQTTALAPDGQPWQQVTLRNKAGMTVTVADWGATLLSAEVPLADGSLRHPLLGCAKLE DYARQAAFLGASVGRYANRIGNSRFPLDGQLVNVTPSNDAGHQLHGGPEGFDKRRWRIVR ADEQEVLFALTSPDGDQGFPGTLQATAHYRLTDDNRIAITYRATVDQPCPVNMTNHVYFN LDGDQRDVRQHQLQILAQRYLPVESDGIPGGELKDVANTSFDFRQPKTIAADFLADADQQ KVKGYDHAFLLDAKGDASQPAAQVWSQDGKLQMTVYTSAPALQFYSGNYLGGTPSQTTEP YADWQGLALESEFLPDSPNHPEWPQPDCVLRPGQEYVSLTEYQFIAC >gi|289776635|gb|GG745509.1| GENE 563 605692 - 606840 1442 382 aa, chain - ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 1 381 1 381 382 724 91.0 0 MSLKEKTQTLFADAFGYPASHVIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRD DRTVRVIAADYDNQTDEFSLDAPIISHDTQQWSNYVRGVVKHLQQRNNHFGGADLVISGN VPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISAL GKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQP ALRDVTLEQFNAVAHELDPVVAKRVRHVLTENARTVEAASALEKGDLKRMGELMAESHAS MRDDFEITVPQIDTLVEIVKAAIGDKGGVRMTGGGFGGCVVALVPEDLVDTVQQAVAKTY EAKTGIKETFYVCKPSQGAGQW >gi|289776635|gb|GG745509.1| GENE 564 606843 - 607889 1188 348 aa, chain - ## HITS:1 COG:galT KEGG:ns NR:ns ## COG: galT COG1085 # Protein_GI_number: 16128726 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 652 91.0 0 MSVFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQTLPAHDPDCFLCPGNTR VTGDTNPNYSGTYVFTNDFAALMTDTPDAPESDDPLMRCQSARGTSRVICFSPDHSKTLP ELSPEALEGVVKAWQEQTADLGKSYPWVQVFENKGAAMGCSNPHPHGQVWANSFLPNEAE REDRLQKEYYAGQGQPMLLDYVQRELADGSRTVVDTEHWLAVVPYWAAWPFETLLLPKAH VQRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNDEDHHHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDVHFRESGV >gi|289776635|gb|GG745509.1| GENE 565 607899 - 608915 1212 338 aa, chain - ## HITS:1 COG:STM0776 KEGG:ns NR:ns ## COG: STM0776 COG1087 # Protein_GI_number: 16764140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Salmonella typhimurium LT2 # 1 338 1 338 338 673 94.0 0 MKVLVTGGSGYIGSHTCVQLLQQGHEVVILDNLCNSKRSVLPVIERLGGKEATFIEGDIR NEALMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYDNNVTGTLKLVSAMRAAGVKNFI FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNP VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAVFGNDYPTEDGTGVRDYIHVMDLA DGHVAAMEKLADKAGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYW ADAAKADRELNWRVTRNLDEMAQDTWHWQSRHPQGYPD >gi|289776635|gb|GG745509.1| GENE 566 609125 - 610597 1774 490 aa, chain - ## HITS:1 COG:modF KEGG:ns NR:ns ## COG: modF COG1119 # Protein_GI_number: 16128728 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Escherichia coli K12 # 1 486 1 486 490 844 86.0 0 MSSLQISQGTFRLSDTKTLKIDRLNLRAGQSWAFVGSNGSGKSALARALAGDLTLLSGQH ESHFSRVTRLSFEQLQKLVSDEWQRNNTDLLSPGEEDTGRTTAEIIQDEVKDPARCARLA EQFGISALLDRRFKYLSTGETRKTLLCQALMTDPQLLILDEPFDGLDVNSRQQLAALLAD LHRAGITLVLVLNRFDEIPEFVQFAGVLADCTLSETGEKSSLLQQALVAQLAHSEKLDGI TLPEPDVPPARHALADSAPRIVLNDGVVSYNDRPVINHLSWTVNPGEHWQIVGPNGAGKS TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTNVRNVIL SGYFDSIGIYQAVSDKQHKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHP TLLILDEPLQGLDPLNRQLVRRFVDVLIGEGATQLLFVSHHAEDAPDCITHRLAFVPSGD GYTYQLGPVA >gi|289776635|gb|GG745509.1| GENE 567 610665 - 611453 946 262 aa, chain - ## HITS:1 COG:ECs0789 KEGG:ns NR:ns ## COG: ECs0789 COG2005 # Protein_GI_number: 15830043 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 354 80.0 1e-97 MQAEILLTLKLQQRLFADPRRIALLKQIDQTGSISQGAKHAGISYKSAWDAINEMNQLSE QPLVDRATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLDSLLAAISR FSLQTSARNQWFGTITGRDRQQVQQHVEVLLADGQTRLTVAITAQSAEKLGLDEGQEVLV LLKAPWVGITLDPAVARQADNQLSGRISHIECGSGQCEVLMTLADGQTLCATLPQAQTSG LAEGTEAIAYFNADRIILATLC >gi|289776635|gb|GG745509.1| GENE 568 611607 - 611756 117 49 aa, chain + ## HITS:1 COG:no KEGG:ROD_07581 NR:ns ## KEGG: ROD_07581 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 49 35 83 83 87 91.0 2e-16 MLELLKSLVFAVIMVPVVMAVILGLIYGLGEVFNLFSGVGHKDRSQQNH >gi|289776635|gb|GG745509.1| GENE 569 611899 - 612672 1046 257 aa, chain + ## HITS:1 COG:STM0781 KEGG:ns NR:ns ## COG: STM0781 COG0725 # Protein_GI_number: 16764145 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 404 85.0 1e-113 MAGSWLRGVIGVSLTLCVAGQALAAEGKVTVFAAASLTNAMQDIAQEYKKEKNVDVVSSF ASSSTLARQIEAGAPADLFISADQKWMDYAADKKAIDPATRATLLGNSLVVVAPKASAQG AITIDEKTDWTSLLKGGRLAVGDPQHVPAGIYAKEALQKLGAWETLSPKLAPAEDVRGAL ALVERNEAPLGIVYGSDAVASKGVKVVGTFPEASHQKVEYPLAIVDGHRNAAVSAFYDYL KGPEASAIFKRYGFTTR >gi|289776635|gb|GG745509.1| GENE 570 612672 - 613361 787 229 aa, chain + ## HITS:1 COG:STM0782 KEGG:ns NR:ns ## COG: STM0782 COG4149 # Protein_GI_number: 16764146 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 228 1 228 229 328 89.0 4e-90 MFLSEPEWQAVLLSLKVSSLAVALSLPFGIFFSWLLVRRTFPGKALLDSILHLPLVLPPV VVGYLLLVAMGRRGFIGSWLYDWFGISFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDV KLEQAARTLGASRWRVFMTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT LPSAMYTLIQTPGGEGAAARLCLIAIGLALVSLLISEWLARVSRQRMGG >gi|289776635|gb|GG745509.1| GENE 571 613364 - 614422 1253 352 aa, chain + ## HITS:1 COG:STM0783 KEGG:ns NR:ns ## COG: STM0783 COG4148 # Protein_GI_number: 16764147 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 352 1 352 352 522 78.0 1e-148 MLELDFTQTLGSHCLQIRETLPASGITAIFGVSGAGKTSLINAISGLTRPQTGRIVLNGR VLNDTAQRICLAPEQRRIGYVFQDARLFPHYKVRGNLRYGMAKCMVSQFDKLVELLGIAP LLDRLPDRLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLAQEIHI PMLYVSHSLDEIQHLADRVLVLEAGKVKAFGPLEEVWSSSVMHPWLPAEQQSTILSATVA AQHPQYAMTALTLGDQLLWVNRLERPAGDTARIRIQASDVSLTLAQPSGTSIRNILRAEV AQCLEVNGQIEVQLRVSGRLLWARISPWARDDLAIAPGQQVFAQIKSVSIAA >gi|289776635|gb|GG745509.1| GENE 572 614423 - 615241 1056 272 aa, chain - ## HITS:1 COG:ybhA KEGG:ns NR:ns ## COG: ybhA COG0561 # Protein_GI_number: 16128734 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 272 1 272 272 438 76.0 1e-123 MTTRVIALDLDGTLLTSKKTILPASLEALARAREAGYQVIVVTGRHHVAIHPFYQALALD TPAICCNGTYLYDYHAKEVLAADPMPVAQAVSLTAMLAEQQIHGLAYVDDAMLYEQPTGH VIRTRNWAQALPEDQRPVFRQVDSLAQAVREVNAVWKFALTDEDIPRLQRFAREVGETLG LECEWSWHDQVDIARAGNSKGKRLAQWVASQGLSMQDVVAFGDNYNDLSMLEAAGTGVAM GNAVDEVKARARVVIGDNESTSIAEFIYRQLL >gi|289776635|gb|GG745509.1| GENE 573 615470 - 616465 1336 331 aa, chain + ## HITS:1 COG:STM0785 KEGG:ns NR:ns ## COG: STM0785 COG2706 # Protein_GI_number: 16764149 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 595 86.0 1e-170 MKQTVYTASPESQQIHVWSLEADGKLTLVQVVDAPGQVQPMVVSPNKEYLYVGVRPEFRV LAYRITPDNGALTFAGEAALPGSPTHISTDHHGRFVFSASYNQGCVSVTPLQDGLPGETV TVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSEDGFLSAQEPAEVTTVEGAGPRH MVFHPNQQYGYCVNELNSSVDVWELKDPNGNIECVQTLDMMPQDFTGVRWAADIHITPDG RHLYACDRTASIITVFSVSEDGSVLAVEGYQPTETQPRGFNLDHSGKYLIAAGQKSHHIA VYEIEGEQGLLHEKGRYAVGQGPMWVVVNAH >gi|289776635|gb|GG745509.1| GENE 574 616573 - 616851 413 92 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3605 NR:ns ## KEGG: Kvar_3605 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 5 92 1 88 88 152 100.0 4e-36 MRQTMHQQPDIYAGLQDTALSDYFRTAGDKLVDESAVMSLAINSILQSEGHLNNKAIILW LIQALESTDDVVTADVIRKTLEIVVGYTMDDI >gi|289776635|gb|GG745509.1| GENE 575 617322 - 617591 299 89 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3603 NR:ns ## KEGG: Kvar_3603 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 9 89 1 81 81 152 100.0 6e-36 MNEMKGAHMQQNGYIPDTANAIAQYFNKASLPSQQETLGQIVMDILNEGRHLNRKALCTK LLSRLDSARAPEEESHYQTLIGLLFAGQE >gi|289776635|gb|GG745509.1| GENE 576 617900 - 619111 977 403 aa, chain + ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 174 403 14 243 243 293 62.0 3e-79 MLTTIIYRSHICDNVSFKSIEAMVARANERNGQADVTGILLFNGTHFFQLIEGPEEKVRD IYQTIVLDPRHYNLVELFCDYAPSRRFGKVGMELFDLREHDREEVLQTVMDRGTTKYQLT YDDRALQFFRTFVESTEKANYFEIPSADSWVFIPDKDTFYPDTPIIDNTESWSFAFQPIV DPFACEIISWEALLRTPDGQSPGAYFAGLAGDDIYLADLHSKRVALSLAGKLGLRNKALS INLLPMTLVKARNAVAFLLDEISRNDLIPEQIIVEFTEREVISRMADFTDAVRKLKGAGI NLAIDHFGAGFAGLSLLAQYQPDRIKIDHELIRNIHQDGPRQSIVQAIIKCCTSLEIAVS AVGVERAEEWMWLESAGISQFQGNLFAGARLGGLPAVAWPEKK >gi|289776635|gb|GG745509.1| GENE 577 619266 - 620000 570 244 aa, chain + ## HITS:1 COG:ycgE KEGG:ns NR:ns ## COG: ycgE COG0789 # Protein_GI_number: 16129125 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 242 1 242 243 315 65.0 5e-86 MAFYSIGEVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRQFDEEDILRIEEIKRWIERG VSVGKVKALLEDNLPAARDESAHLQEEMMSILRYMQPARIRAKLMALSHQHPVDTLIDSL LVPVRQRLKLDQNTSLVISSLLDGLLIDCVALFLAEARKKNGKETLLVGWSNEDRTRLWL EAWRLSQRGWHVNVLAEPLESPRPELFPGQHIFVWTGRAATPLQEELLSHWQEQGFSIHF HGTQ >gi|289776635|gb|GG745509.1| GENE 578 620038 - 620592 484 184 aa, chain - ## HITS:1 COG:STM1265 KEGG:ns NR:ns ## COG: STM1265 COG2771 # Protein_GI_number: 16764616 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 18 183 18 182 197 64 24.0 1e-10 MSHHNTCYRSEHYDLWFDNRFLLYGMSLILNTLPASYFRKKHVFFTSDNYFAVLEHNYNR RDTLFILLTEGNDLNFLSELPMLRLPANSTPEELKIFLHQPTRYYKTHPAPGASVQFTER EKKVIQLISNGEAVASIGRSLNLHIKTIYQIRLNLIKKLGCSGRTDFFNISRSETFKSWS QIHL >gi|289776635|gb|GG745509.1| GENE 579 620675 - 620890 231 71 aa, chain - ## HITS:1 COG:no KEGG:KP1_1732 NR:ns ## KEGG: KP1_1732 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 70 52 121 121 123 92.0 2e-27 MHIKNTIPAEFVFNSALMKDIENTLIKQHSTINNERMITEIQHRLQTESNEILSDLYLQA LDMLYSKKHYH >gi|289776635|gb|GG745509.1| GENE 580 621625 - 622131 671 168 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3598 NR:ns ## KEGG: Kvar_3598 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 168 1 168 168 317 100.0 2e-85 MRGKSVMLLAGLAAFAQAKEINLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSED SKYSLLIGTMNNSFDDRCLALGVRRDWYHNGSGWTFKGVYGYTGEFFFDAFEHCGDHGSY KDFKDATGIGFSPYIYHAIQYNFTDYFALESGIIIPSVFVISIQWSFR >gi|289776635|gb|GG745509.1| GENE 581 622148 - 623113 1210 321 aa, chain - ## HITS:1 COG:YPO2592 KEGG:ns NR:ns ## COG: YPO2592 COG3274 # Protein_GI_number: 16122805 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 321 1 321 321 133 27.0 5e-31 MNSTGLSIIKTLGCMTAVTFFTIYNTWDHYDYDYHWILGLLTFISTIATPLFFVVAGYLD AQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPFIAW LSQRRGLFFTVVLTLLCCAYGYDLLSVLYPDKHLFSLPPQYRLWTWLLFYLTGQLFNDPR VTEWIRDPRVIKASIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVI AANAVQFKKNRELKEAVLATVSKAMTGVYILHYSVFHLLVMLIPIHSLATKLGVIALTFI LSVLISLAVLSSTLLKKVITL >gi|289776635|gb|GG745509.1| GENE 582 623110 - 626175 3416 1021 aa, chain - ## HITS:1 COG:YPO0421 KEGG:ns NR:ns ## COG: YPO0421 COG0841 # Protein_GI_number: 16120754 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1010 1 1011 1028 1216 64.0 0 MDISRQFINNPTRVWLAILLLGVGGLFALLNIGRLEDPAFTIKTAVIVTHYPGASAQQVE EEVTLPLENAIQQLPSLDNVSSISSNGLSQITVNIASQYHSSELPQIWDELRRRVGDASR LFPPGVVPSFVNDDFGDVFGFFFAISGDSFTNPELVRYAEQLRRELVLVPGVGKVAIGGA IPQQINVDISLAKMAARGITLNQLAAILTRLNVVSSAGEIRAGSESIRLHPTGEFQNIDE LGDLLVSPHGASATTRLRDIATLSRGLTDSPSSIYHANGRQAVTMGVSFIPGVNVIDVGH ALEARLQQMAADKPAGIDIAIFYDQAAEVAHSVNGFITNFLMALAIVVGVLLVFMGVRSG IIIALSLALNVLGTLLIMYIWGIELQRISLGALIIALSMLVDNAIVIVEGVLIARQQGSP LLGAINYVIRRSALPLLGATVIAILAFAPIGLSQDSTGEYCKSLFQVLLISLMLSWFSAL TITPVLIKWWLFKNAPSAEAPKEKADPYRGRFYRGYQQTLRILLQQKTLTLVLMGALLAG AIWGFTFVRQNFFPSSNTPIFFVDLWLPYGTDINATEQMTRDIERSIASQPGVATTVSTI GQGSMRFILTYSGQRQYSNYAQIMVRMDDQRSIAPVTRHVEAWIARNYPQVNASTKRIMF GPSGDSAIEVRIKGPDPDTLRALASQVGDILAADPATDSVRNDWQNRSKVIRPQYSLALG RELGVDKQDIDSALEMNFSGSRAGLYREGSDLLPVIVRPPEAERQDANHLNNVLVWSQSR QQYIPLSNVIHGFSLEWEDPLILRRDRTRVLTVQTDPSPQSGQTSGDILARVKPRIDALT LPHGYRIEWGGDAENSSEAQQGLFTTLPLGYLVMFIITVLMFSSLKNAVAIWLTVPLALI GVTPGFLLTGIPFGFMALIGLLSLSGMLIRNGIVLVEEIEQQKQEKDQRQAIIDAATSRL RPILLTAFTTVLGLAPLLRDVFFQSMAVVIMFGLAFATVLTLLVLPVIYACFHHKDMTPQ R >gi|289776635|gb|GG745509.1| GENE 583 626176 - 627261 902 361 aa, chain - ## HITS:1 COG:YPO0420 KEGG:ns NR:ns ## COG: YPO0420 COG0845 # Protein_GI_number: 16120753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 10 361 10 360 360 340 50.0 2e-93 MNRYFSLIPVVILLTTACDQKAPSVEAAPRMVKVAQVTAVGNTQQRTFPARIESGDSTEL SFKRGGQVESLDIRQGATLTQGQTLARLNAREAQQRVNERQTAATLAQRQFDRFQTLAGR QAISQAEMDVQRANRDAANAALKIAREELAQMSLTAPFGGIAAGVHIRNHQVVAAGQPVI TLTRTDLLDVVFSIPENLFTSLDIRNTAYRPVVRINTLPGREFTAEYKEHTGSSDNSTLT WQIILTMPRPDDFPTVGGVSGTVTVNLGNLPASAGRETLVVPVEAVFNPDNRPKNEPVVW VVKGENAHLYLEERRVTVGEVTSQGVMITEGLRAGEQVVAAGVSELHDRQPVRIWTRERG L >gi|289776635|gb|GG745509.1| GENE 584 627316 - 627426 229 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGYSLLRLGLFVALAIVACTLVGLFTYLVVAALAE >gi|289776635|gb|GG745509.1| GENE 585 627795 - 628226 429 143 aa, chain + ## HITS:1 COG:ybdQ KEGG:ns NR:ns ## COG: ybdQ COG0589 # Protein_GI_number: 16128590 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli K12 # 1 143 1 142 142 132 49.0 2e-31 MYKNIVVPVDVFDAGLADKALSHAKFLAQHSAGQIHLVHVIPAFSPVLTRGFISDARKME EHLISTAKEKLSDLVKKNSLAEETSHLYVRSGNIRDQVIDLADELKADVVIVGSRNPGIQ THLLGSEAANIVRYAHVPVFVVR >gi|289776635|gb|GG745509.1| GENE 586 628278 - 630965 3497 895 aa, chain + ## HITS:1 COG:YPO0451 KEGG:ns NR:ns ## COG: YPO0451 COG0474 # Protein_GI_number: 16120780 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 7 886 16 895 908 1188 67.0 0 MNTDKPGAPFYQRSVEETLASVQSTPEGISGTEAATRLQQYGENALPQKPGKPAWLRFIV HFNDVLIYVLLAAALLKAVMGHWIDMAVILAVAVVNALIGFIQESNAEKSLQSIRNMLSS EAVVIRQGNHETIPTTSLVPGDIVVIRAGDRIPADLRVIEAHNLRVEEAILTGESTVVEK TTEPLSGDLPLGDRSNLLFSGTTVSSGAGKGIVVATGGDTELGHINQMMAGIEKHRTPLL VQMDKLGKAIFILILVMMAALFVFSLLFRDMPVSELMLSLISLAVASVPEGLPAIISIIL SLGVQAMARQKAIIRKLPTVETLGAMTVICSDKTGTLTMNEMTVKAVITADSVYRVEGDS YEPVGKIHAIDDPTPVAVAPGTLFERYLRTIDLCNDSQLIKDESGLWKITGGPTEGALKV LAAKVTLPPLTSELRSKIPFDSQYKYMSTLYRLGEEEVVLVTGAPDVLFRLCQYQQSDSG LQPLDLPYWEGKIEEYAREGLRMVAAAWKPASAGQTELTHQDLQQGVILLGVAGMMDPPR PEAITAIADCLQAGIRVKMITGDHPQTAMSIGKMLGIGNAGNAITGRELEVMDDAQLSVA AQQYDIFARTSPEDKFRLVQALQSKKEIVGMTGDGVNDAPALKQADVGVAMGIKGTEVTK EAADMVLTDDNFATIASAVREGRRVYDNLKKTILFVMPTNLAQGLLIVIALLAGNVLPLT PVLILWMNMATSATLSFGLAFEAGEKNIMRRPPRDPKIHVMDGFAIWRVAFVGSMIAVSA FILEAWLQPRGYSPEFIRTVLLQTLVTAQWFYMLNCRVSDGFSLTKSLLANKGIWIVSGV LLVLQLLIIYAPFMQMLFGTTGLPFRYWVITFIIGFAMFLIVELEKPLTRKWRTA >gi|289776635|gb|GG745509.1| GENE 587 631238 - 632521 1514 427 aa, chain - ## HITS:1 COG:STM0786 KEGG:ns NR:ns ## COG: STM0786 COG4677 # Protein_GI_number: 16764150 # Func_class: G Carbohydrate transport and metabolism # Function: Pectin methylesterase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 656 79.0 0 MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNADEAKNFTPAAYFQ SLTPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTVQAAVDAAIARHSNRRLFIAIMPG EYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWY MFDSCQNKSAATVGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRTDGDQV QINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDF RVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIR DSVINEGFNIAQPWAAAVGSNRAFSGNVGAVDAKGNLQRNLNDNSVNRMWEYNNRGVGST VVAEPKQ >gi|289776635|gb|GG745509.1| GENE 588 632778 - 633995 1493 405 aa, chain + ## HITS:1 COG:STM0787 KEGG:ns NR:ns ## COG: STM0787 COG1228 # Protein_GI_number: 16764151 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Salmonella typhimurium LT2 # 1 403 1 405 407 563 68.0 1e-160 MTQATSERVIWRNARLATLNPDYSQPYGLLERHALLVRNGRIEAIVADADAPGGRSIDLE GRLVTPGLIDCHTHLIFGGSRAQEWEQRLNGVSYQTISANGGGINSTVHATRDSSEAELL ALAQPRLARLLREGVTTLEIKSGYGLDLQNERKMLRVARQLADDNGVELSATLLSAHATP PEYQGDADGYISLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVK GHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAGMRESGTVAALLPGAFYFLNETRKP PVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGR QDSHGQLAAGFVANFAIWDAEHPVEMVYEPGRAPLWGRVVRGERQ >gi|289776635|gb|GG745509.1| GENE 589 633992 - 634948 1012 318 aa, chain + ## HITS:1 COG:STM0788 KEGG:ns NR:ns ## COG: STM0788 COG0010 # Protein_GI_number: 16764152 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Salmonella typhimurium LT2 # 1 318 1 313 313 407 67.0 1e-113 MMLWQATPASLWQGRDDSAEAPNALRLFQTIARAERFAPQEMPGDIALLGFACDEGVRRN KGRTGAGHGPEALRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVAACQRAG KRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFAECASSGTPFRQLALECD AQQRGFHYTCIGVSRAANTQALWDEAARRQVAVVEDLAVLADFDTHVLPELERNIAQYDR LYLTIDLDVLPAREMPAVSAPAALGVPLAILLRIVEPLCRSGKLQAVDLVEFNPQFDIDG QGARAAARLAWQIAHWWR >gi|289776635|gb|GG745509.1| GENE 590 635010 - 635735 896 241 aa, chain + ## HITS:1 COG:STM0789 KEGG:ns NR:ns ## COG: STM0789 COG2188 # Protein_GI_number: 16764153 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 359 75.0 2e-99 MFAQQPRSAPAPFYEKVKQAISEKIYRGEWRPHDRIPSEAELVAQFGFSRMTINRALREL TDEGLLVRLQGVGTFVAEPKGQSALFEVRSIADEIVSRRHQHRCEVLLLEETEADLIQAE ALTVAEGTRIFHSRMVHFENEVPVQIEDRCVNAAVVPDYLLQDYTTTTPHDYLSLIAPLT EGEHIVEAVQATSEECALLRILPHDPCLLIRRRTWSKTHIVSHARLLFPGARYRLQGHFS S >gi|289776635|gb|GG745509.1| GENE 591 635878 - 637566 2160 562 aa, chain + ## HITS:1 COG:YPO4017 KEGG:ns NR:ns ## COG: YPO4017 COG2987 # Protein_GI_number: 16124140 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Yersinia pestis # 2 559 3 560 563 1019 86.0 0 MSQSKYRQLDVRAPRGTTLTARSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARN WECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNEL DAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGA QPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALC GNAADIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKR SMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPF RWVALSGDPQDIYKTDAKVKEIIKDDKHLHHWLDMARERISFQGLPARICWVGLEWRQKL GLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS GATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLRNDPATGVMRHADAGYDIA IECAAEQGLNLPMVAATQGNAK >gi|289776635|gb|GG745509.1| GENE 592 637563 - 639089 1949 508 aa, chain + ## HITS:1 COG:STM0791 KEGG:ns NR:ns ## COG: STM0791 COG2986 # Protein_GI_number: 16764154 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Salmonella typhimurium LT2 # 1 504 1 503 506 779 82.0 0 MKSLTLIPGKLSLSQLREVYSHPLNITLDSSAFAAIDESVACVNAILAEGRTAYGINTGF GLLAQTRISTDDLENLQRSLVLSHAAGVGEPLDDDLARLIMVLKINSLSRGFSGIRLSVI QALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATDALRQA GLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDA RIHEVRGQRGQIDAAALYRHLLTDDSAISRSHHNCTKVQDPYSLRCQPQVMGACLTQIRQ AAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIAL MMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVS MAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQD RFFAPDIENAIALLAARHLTRLLPAVLH >gi|289776635|gb|GG745509.1| GENE 593 639188 - 640570 2180 460 aa, chain + ## HITS:1 COG:YPO4015 KEGG:ns NR:ns ## COG: YPO4015 COG1113 # Protein_GI_number: 16124138 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 9 460 8 459 467 570 68.0 1e-162 MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFMV MRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWY PDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLIKVVAIIAMMAAGAGIIFFGFGHS FPATGLENLWSHGGFAPHGWQGIIASLGIVMFAFGGVEIIGVTAAEAQNPKKVIPQAINT IPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATVLNIIVISASISAI NSDIFGAGRMMYGMSKEGLAPKCFQRIASNGVPWMTVVVMGVALLVAVVLNYLMPEQVFV LIASLAAFATVWVWLMILLSHFSMRRGLSAEERSKIEFPIPFWPVGPLLTLLFMGLVIAV LGMVEETRVALLAGLVWLGLLTVVWYARVRKTALQVATEQ >gi|289776635|gb|GG745509.1| GENE 594 640671 - 641147 530 158 aa, chain - ## HITS:1 COG:ybhB KEGG:ns NR:ns ## COG: ybhB COG1881 # Protein_GI_number: 16128741 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli K12 # 1 158 1 158 158 274 86.0 4e-74 MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSG WWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTV HALDIDKIDVDAEASGAMVGFNVHFHSLASASITALFS >gi|289776635|gb|GG745509.1| GENE 595 641218 - 642525 1654 435 aa, chain - ## HITS:1 COG:STM0793 KEGG:ns NR:ns ## COG: STM0793 COG0161 # Protein_GI_number: 16764156 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Salmonella typhimurium LT2 # 7 434 1 428 429 762 84.0 0 MVYKSLMTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWA AIHGYNHPRLNAAMKAQIDQMSHVMFGGITHPSAVALCRQLVAMTPESLECVFLADSGSV AVEVAMKMALQYWQAKGQPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLF APAPQSRFDGEWDELDMVPFARLMAAHRHDIAAVILEPIVQGAGGMRMYHPEWLRRVRKM CDREGILLIADEIATGFGRTGKLFACEHAGIAADILCLGKALTGGTMTLSAALTTREIAE TISNGEAGCFMHGPTFMGNPLACAVASESLRLLESGEWQQQVAAIEAQLQAELASARGSA LVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPKQLTRLT RAVNLAVQDETFFSE >gi|289776635|gb|GG745509.1| GENE 596 642593 - 643633 1310 346 aa, chain + ## HITS:1 COG:bioB KEGG:ns NR:ns ## COG: bioB COG0502 # Protein_GI_number: 16128743 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 662 93.0 0 MAHHARWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYC PQSARYKTGLESERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGV KALGLESCMTLGTLTDSQAQRLAGAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKV RDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDA FDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDK DLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL >gi|289776635|gb|GG745509.1| GENE 597 643630 - 644787 1372 385 aa, chain + ## HITS:1 COG:STM0795 KEGG:ns NR:ns ## COG: STM0795 COG0156 # Protein_GI_number: 16764158 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 385 1 385 385 494 73.0 1e-139 MTWQQRIERALDERRQTDAFRRRLPVSHGAGRWLEREGERWLNFSSNDYLGLSQHAGIIA AWQQGAERYGVGSGGSGHVSGYSEAHRALEEEFADWLGYPRALLFISGFAANQALVAALA EKEDRIVADRLSHASLLEAASLSPAQLRRFAHNDPQQLAQLLAKPLDGLQLVVTEGIFSM DGDSAPLAAIHAAAQTAGAVLLADDAHGIGVVGEEGRGSCAAQGVRPELLVVTFGKAFGV SGAAVLCSESMADYLLQFARHLIYSTAMPPAQAVALSAALRVIRSDEGQQRRETLAARIR QFRAGMGDVSLGLTDSVSAIQPLIVGDNARALSLACRLREAGCWATAIRPPTVPVGSARL RLTLTAAHQAEDINRLLEALHGHGE >gi|289776635|gb|GG745509.1| GENE 598 644771 - 645526 854 251 aa, chain + ## HITS:1 COG:ECs0855 KEGG:ns NR:ns ## COG: ECs0855 COG0500 # Protein_GI_number: 15830109 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 294 66.0 9e-80 MVTVNKQAVAAAFGRAASVYTQHDELQRRSADLLLRQLARRDFAQVLDAGCGPGSMSRYW REAGSVVTALDLSAGMLAQAQRHDAAQHYLQGDIEALPLPDGCVDLAWSNLAVQWCDDLR AAIGELCRVVRPGGRVAFTTLLAGSLPELNQAWQAIDDRPHANRFLSEPAVRAALSGLRA EGVVHQISLPFADALSAMRSLKGIGATHLHQGRASAPLGRGKLRELQLAWPQQQGICPLT YYLFTGVIERD >gi|289776635|gb|GG745509.1| GENE 599 645519 - 646241 784 240 aa, chain + ## HITS:1 COG:STM0797 KEGG:ns NR:ns ## COG: STM0797 COG0132 # Protein_GI_number: 16764160 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Salmonella typhimurium LT2 # 1 228 1 228 228 327 75.0 2e-89 MTKRFFVTGTDTEVGKTVASSALLQAANQLGFNTAGYKPVASGSDLTAQGLRNEDALALQ RNSRVALSYEQVNPYTFAEPTSPHIISADEGRPIAATTLSSGLRELERLADWVLVEGAGG WFTPLSDTLTFADWAQQEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQP PGKRHGEYLATLKNRLAAPFLGEIPWLVDIAQRDDLGQYLDLSALDLASSTAPAAVHPAP >gi|289776635|gb|GG745509.1| GENE 600 646183 - 646905 181 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 220 1 221 245 74 25 1e-11 MLNLQAVNHFYGNQHSLWNVDLELRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTW HDIGAPPCDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEI YDHFPELYALRQRKGASLSADDQYQLALARALIVQPRLLILDEPSRGAGPRCLQKLAELL LRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWMTPDPAR >gi|289776635|gb|GG745509.1| GENE 601 647616 - 649637 2830 673 aa, chain + ## HITS:1 COG:ECs0857 KEGG:ns NR:ns ## COG: ECs0857 COG0556 # Protein_GI_number: 15830111 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1186 93.0 0 MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESTVPR YTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLD PIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG QGLAKTKAKGRGKAKAVEPAGLSAVEMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD QLHQLRELFIAAS >gi|289776635|gb|GG745509.1| GENE 602 649817 - 649909 140 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKINFREYLAVATALVIIVAFFHQWVLTF >gi|289776635|gb|GG745509.1| GENE 603 649888 - 650985 1535 365 aa, chain - ## HITS:1 COG:ECs5094 KEGG:ns NR:ns ## COG: ECs5094 COG0642 # Protein_GI_number: 15834348 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 10 365 9 362 363 431 65.0 1e-120 MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVE HEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELESRTPDNLTPIVLSESV PEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGVGVDPL IQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELETMLAQRQQRLLLT DVESEAIVSGDATLIRVILRNLVENAHRYSPKGSTIRVSVKAGLMPVMAVEDEGPGIDEA KSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPRRAGQ NVSTH >gi|289776635|gb|GG745509.1| GENE 604 650989 - 651660 947 223 aa, chain - ## HITS:1 COG:ECs5095 KEGG:ns NR:ns ## COG: ECs5095 COG0745 # Protein_GI_number: 15834349 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 222 340 78.0 1e-93 MKILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLASNHYSLIVLDLGLPDEDGL HFLTRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLRRHN NQGDNEISVGDLRLNVTRRLVWLGETALELTPKEYALLSRLMMKAGSPVHREILYNDIYS WDNEPATNTLEVHIHNLREKIGKSRIRTVRGFGYMLANHIDTE >gi|289776635|gb|GG745509.1| GENE 605 651660 - 653300 1804 546 aa, chain - ## HITS:1 COG:STM4293 KEGG:ns NR:ns ## COG: STM4293 COG2194 # Protein_GI_number: 16767543 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 6 543 6 543 547 843 71.0 0 MSLLPLRRPLFSRTTYLILFACYIGIFLNLAFYRQVFPLLPVNSLHNWLVFLSMPIVAIS VMNIITTLASFLKLDRVVISLFILLSASAQYFIWNFGVVIDRSMITNILDTTPAESFALL SGEMIAVLGLSGVLAVFVAWWVKIRKPATRWRGAAMRLLNIAVSALLIILVAALFYKDYA SVFRNNKELVKSLSPSNSIVALNSWYAHNRMDNLPLVKIGEDARQKPVMHSGPRKNLTIV VLGETSRAGNFSLGGYDRETNPRLQQDDVVYFPKTTSCGTATAVSVPCMFSNMPRAHYDE ELAHHQEGVLDILQRAGVQVLWNDNDGGCKGACDRVPHQNVTELHLSGQCIDGECYDEVL FHNLDSYIDNLKQDGIIVLHTIGSHGPTYYNRYPAEFKKFTPTCDTNEIQSCTQQQLTNT YDNTILYVDYVVDKAIKLLQSKQDKFTTSLVYLSDHGESLGEDGVYLHGLPYSIAPDTQK NVPMLLWLSPDYQQRYGVSSQCLQQQAKTKDYSQDNLFSTLLGLLGVSTHEYQAADDILT PCREAG >gi|289776635|gb|GG745509.1| GENE 606 653404 - 654309 996 301 aa, chain - ## HITS:1 COG:STM0801 KEGG:ns NR:ns ## COG: STM0801 COG0391 # Protein_GI_number: 16764164 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 301 1 302 302 452 81.0 1e-127 MRNRTFADLDRVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW GDMRNCINQLIAEPSVASAMFEYRFSGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN LLKVDAFLIPMSEQPVDLMALDHEGHEVYGEVNIDQLDNLPQELMLTPPVPATREAVEAI AEADLILIGPGSFYTSLLPILLLDEMAQALRRTPAPMVFIDNLGKEHSPAARLSLAERIA IMERYVGKRVVDAVIAGPKADIRGINDRLVIQTPLEASDVPYRHDRALLRGALEKAIQLP G >gi|289776635|gb|GG745509.1| GENE 607 654644 - 655633 1078 329 aa, chain + ## HITS:1 COG:STM0802 KEGG:ns NR:ns ## COG: STM0802 COG2896 # Protein_GI_number: 16764165 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 329 1 329 329 610 87.0 1e-174 MASQLTDAFARKFFYLRLSITDVCNFRCTYCLPDGYKPGAVNNNGFLSVDEVRRVTRAFS ALGTEKVRLTGGEPSLRRDFTEIIAAVRENPAIRQIAVTTNGYRLARDVERWRDAGLTAI NVSVDSLDARQFHAITGQDKFHQVMDGIDAAFAAGFDKVKVNTVLMRDVNHHQLDTFLAW IQPRRIQLRFIELMETGEGSDLFRRHHLSGMVLRDELLRRGWIHQIRQRSDGPAQVFCHP DYAGEIGLIMPYEKDFCATCNRLRVSSVGKLHLCLFGEGGVDLRDLMAEDEQQAELEARI AEALTHKKQTHFLHQGNTGITQNLSYIGG >gi|289776635|gb|GG745509.1| GENE 608 655657 - 656169 750 170 aa, chain + ## HITS:1 COG:ECs0860 KEGG:ns NR:ns ## COG: ECs0860 COG0521 # Protein_GI_number: 15830114 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 1 170 1 170 170 322 94.0 3e-88 MSQASAEFIPTRIAILTVSSRRGEEDDTSGHWLREAAQEAGHHVVDKAIVKENRYAIRAQ VSAWIASDDVQVVLITGGTGFTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQ SRAVAGVANRTLIFAMPGSTKACRTAWDNIIAPQLDARTRPCNFIPHLKK >gi|289776635|gb|GG745509.1| GENE 609 656173 - 656661 849 162 aa, chain + ## HITS:1 COG:ECs0861 KEGG:ns NR:ns ## COG: ECs0861 COG0315 # Protein_GI_number: 15830115 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 158 1 158 161 275 92.0 4e-74 MSQLTHINAAGEAHMVDVSGKAETVREARAEAYVEMQAATLAMIIDGSHHKGDVFATARI AGIQAAKRTWELIPLCHPLMLSKVEVNLQAQPEHNRVRIESLCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPLRLLAKSGGKSGDFKVDERHD >gi|289776635|gb|GG745509.1| GENE 610 656654 - 656902 396 82 aa, chain + ## HITS:1 COG:STM0805 KEGG:ns NR:ns ## COG: STM0805 COG1977 # Protein_GI_number: 16764168 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Salmonella typhimurium LT2 # 1 82 3 83 83 119 78.0 1e-27 MIKVLFFAQVRELVGTDALTLDASDLATVEAVRQQLAARGDRWALALEEGKLLAAVNQTL TAFDHPVASGDEVAFFPPVTGG >gi|289776635|gb|GG745509.1| GENE 611 656904 - 657356 665 150 aa, chain + ## HITS:1 COG:moaE KEGG:ns NR:ns ## COG: moaE COG0314 # Protein_GI_number: 16128753 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Escherichia coli K12 # 1 150 1 150 150 254 85.0 3e-68 MTQTRIVVSPARFSVGDEYPWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTE KSLAEIVNLARERWPLGRVTVIHRIGEMWPGEEIVFVGVTSAHRGSAFAAGEFIMDYLKT RAPFWKREATPEGERWVDARDSDRQAAERW >gi|289776635|gb|GG745509.1| GENE 612 657402 - 658106 1176 234 aa, chain + ## HITS:1 COG:STM0807 KEGG:ns NR:ns ## COG: STM0807 COG0670 # Protein_GI_number: 16764170 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Salmonella typhimurium LT2 # 1 234 1 234 234 352 94.0 3e-97 MDRYPRSDSIVQGRTGLQTYMAQVYGWMTVGLLLTAFIAWFAANTPAVMMFVFSSKITFF GLIIAQLALVFVLSGMVQRLSAGMATTLFMLYSALTGLTLSSIFIAYTYSSIASTFVVTG GMFGAMSLYGYTTKRDLSGFGSMLFMGLIGIVLASLVNLWLKSEALMWAVTYIGVVLFVG LTAYDTQKLKNIGEQIDTRDSATLRKYSILGALTLYLDFINLFLMLLRIMGNRR >gi|289776635|gb|GG745509.1| GENE 613 658496 - 659506 494 336 aa, chain - ## HITS:1 COG:PA0445 KEGG:ns NR:ns ## COG: PA0445 COG3547 # Protein_GI_number: 15595642 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Pseudomonas aeruginosa # 1 334 1 336 338 367 58.0 1e-101 MNIKRIGLDLAKQVFQLHAVDHQERVVLRKTLHRARMLTFFTRLEPCLIGIEACGSSHYW ARELTRLGHTVRIIPPQFVKPYLKGNKNDANDAEAICEAVSRPGMRYVAIKSGAQQSMQA EHRVRARLIHDRTALSNEIRGMLGEFGFVLPAGLSALRKALPEIFSQQEKWDNRFIRLLS ELTEELQALDERLNRYDRRLKQLAQEDERIRRLQEISGIGPVTASALVAAVGDAKQFKSG REMAAWLGLVPRQHSSGGKTKMGHISKRGDSYLRTLLIHGARAVLNACDHKEDRRSRWLQ SVAERRNRNIATVAMANKNARIAWSVLSRGEEYRVM >gi|289776635|gb|GG745509.1| GENE 614 659441 - 659566 73 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINRMKLKNLFCEIEANTFNIHVDTSPWELKLTPQSGTLMP >gi|289776635|gb|GG745509.1| GENE 615 660693 - 661658 1419 321 aa, chain - ## HITS:1 COG:STM0811 KEGG:ns NR:ns ## COG: STM0811 COG0392 # Protein_GI_number: 16764174 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Salmonella typhimurium LT2 # 1 320 1 320 320 441 79.0 1e-123 MSKSHPRWRMAKRVLTVLFFIAVIVLLVIYAQKVDWQDVWKVIRGYDRLALFSAIALVIV SYLIYGCYDLLGRAYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLNG GTITRIFSLSITTNWLGYILLGGVIFTADLVKLPPHWYISQTTLRIIGGVMLILTLCYLF GCAFAKRRHLTIKGQRLVLPSWRFALLQMGISAANWMAMGAIIWLLLGSEINYFLVLGVL LVSSIAGVIVHIPAGIGVLEAVFIAMLSGEEISKGAIIAALLAWRALYYFLPLLLATVAY LLLESRAKKLRQKNERKLARE >gi|289776635|gb|GG745509.1| GENE 616 661655 - 662899 1503 414 aa, chain - ## HITS:1 COG:STM0812 KEGG:ns NR:ns ## COG: STM0812 COG1502 # Protein_GI_number: 16764175 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 1 408 1 407 413 692 79.0 0 MKCRWQEGNRITLLENGDQYYPALFAAIGRASRRVILESFIWFEDEVGWRLHAVLLKAAR RGIQVEVLLDGYGSPDLSDEFVGELTAAGVIFRYYDPRPKLMGMRTNLFRRMHRKIVVID DTTAFVGGINYSAEHMSDYGPEAKQDYAVQVEGPVVLDILQFELENLPNSETARRWWRRR RHQPEINQTPGEAQALFIWRDNQDHRDDIERHYLKMLTSARREVIIANAYFFPGYRLLHA MRNAARRGVRVKLIVQGEPDIPIVKFGAHLLYHYLVKGGVQIYEYRRRPLHGKVALADDH WATVGSSNLDPLSLSLNLEANLIIHDRVFNQTLRDNLNGLIARDCQRIDKTMLPKRNWWR LGVSVMAFHFLRHFPAWVGWLPAHTPRLARVSPPVQPEIETQDRVDSQTRDNPL >gi|289776635|gb|GG745509.1| GENE 617 662896 - 663657 484 253 aa, chain - ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 440 82.0 1e-123 MAEPTSGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLH IENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKR GLLYCRIVPPESGVTIHVICVHLGLRADQRQAQLTMLAEWVNTLPAGEPVVVAGDFNDWR QQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASHPKALALKQWRH LSDHAPLSVEIHL >gi|289776635|gb|GG745509.1| GENE 618 663789 - 664199 546 136 aa, chain + ## HITS:1 COG:no KEGG:ROD_07911 NR:ns ## KEGG: ROD_07911 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 136 1 136 136 192 83.0 3e-48 MKWQQRVRVATGLSCWQIMLHLLVVAVLVMGWMSGALVRVGLGLCVLYSVTLLAMLFLQR HHEARWRDVGDFLEELTTTWYFGAAMIALWLLSRVLHNNLLLALAGLVILAGPAVVSLLA KDKKLRNLSSEHRIRR >gi|289776635|gb|GG745509.1| GENE 619 664161 - 665267 1395 368 aa, chain - ## HITS:1 COG:STM0815 KEGG:ns NR:ns ## COG: STM0815 COG0842 # Protein_GI_number: 16764178 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 367 1 367 368 644 92.0 0 MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRH AVELTQRFARAKAFTHVLLLKSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLL LDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELVVRNWYNPNLDYKWFVVPSLI AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSG YVSPVENMPQWLQDLTWINPIRHFTDITKQIYLKDASLKIVWGSLWPLLVIAATTGSAAY AMFRRKIA >gi|289776635|gb|GG745509.1| GENE 620 665397 - 666530 1732 377 aa, chain - ## HITS:1 COG:STM0816 KEGG:ns NR:ns ## COG: STM0816 COG0842 # Protein_GI_number: 16764179 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 377 1 376 376 649 91.0 0 MSNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGVLL EQQSEEALDFVHTMTGSPYIDATVSDNRQQLIQMMQAGRIRAMVVIPVDFDRQMARAGAD APLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGETFEPLIDVQMRYWFNPAAISQ HFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGML AMLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAA FLPSIMLSGFIFQIDSMPAVIRAVTYVIPARYFVNTLQSLFLAGNIPVVLLVNVLFLIAS AVMFIGLTWLKTKRRLD >gi|289776635|gb|GG745509.1| GENE 621 666520 - 668259 334 579 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 330 549 12 233 318 133 34 2e-29 MSEAIIALNGLSRRFPGMDRPAVAPLTCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPD EGRASVIGFDPLKDDSALHAVLGYMPQKFGLYEDLTVMENLTLYADLRSVTGEARKKIFD RLLEFTSLGPFTERLAGKLSGGMKQKLGLACTLVGDPKVLLLDEPGVGVDPIARRELWQM VHELAGDGMLILWSTSYLDEAEQCRDVLLMNEGKLLYQGEPTALTQTMAGRSFLVSSPQE NNRRLLQRALKLPQVSDGVIQGKSVRLILKKDARIEEVQQHGDMPPLQVADTAPRFEDAF IDLLGGAGTAESPLGAIIHRVDGSKDETVIEAQSLTKKFGDFAATDHVDFQVKRGEIFGL LGPNGAGKSTTFKMMCGLLVPTSGKALVLGMDLKVSSGKARQHLGYMAQKFSLYGNLSVE QNLRFFSGVYGLRGRAQNEKIARMSDAFGLKSIARHAADELPLGYKQRLALACSLMHEPD ILFLDEPTSGVDPLTRREFWLHINSMVDKGVTVMVTTHFMDEAEYCDRIGLVYHGKLIAS GTPDALKAQAADDSQTDPTMEQAFITLINRWDKENSHEQ >gi|289776635|gb|GG745509.1| GENE 622 668252 - 669247 1290 331 aa, chain - ## HITS:1 COG:STM0818 KEGG:ns NR:ns ## COG: STM0818 COG0845 # Protein_GI_number: 16764181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 464 80.0 1e-130 MKKPVVVILLIVILLAALGGGWWWYQSSRQQPLTLYGNVDIRTVNMSFRVGGRLASLTVD EGDSIRAGQTLGELDRAPYENALLQAQANVSTAQAQYDLMMAGYRAEEIAQAAAAVKQAQ AAYDYAQNFYQRQLGLRASSAISANDLENARSSRDQAQATLKSAQDKLRQYRAGNRPQEI AQAKASLEQAQAALAQAKLDLHDTVLTAPSDGTLMTRAVEPGTMLNAGGTVLTLSLTHPV WVRAYVDEKNLGQAQPGREVLLYTDSRPDKPYHGKIGFVSPSAEFTPKTVETPDLRTDLV YRLRIVVNDADGALRQGMPVTVSFNHGNGHE >gi|289776635|gb|GG745509.1| GENE 623 669247 - 669906 625 219 aa, chain - ## HITS:1 COG:ECs0874 KEGG:ns NR:ns ## COG: ECs0874 COG1309 # Protein_GI_number: 15830128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 218 10 227 227 345 80.0 3e-95 MTSKGEQAKNQLIAAAIAQFGEYGQHATTRDIAAQAGQNIAAITYYFGSKDDLYLACAQW IADFIGDNFRPQAEAAEALLAGKSPDRQAIRALILNACHNMILLLTQDDTVNLSKFISRE QLAPTAAYHLIHQQVIAPLHHYLTRLIAAWTGRDAGDTQMILHTHALLGEVLAFRLGRET ILLRTGWTQFDAQKTEQIFEVITCHIDFILHGLSQRSLG >gi|289776635|gb|GG745509.1| GENE 624 669980 - 670903 833 307 aa, chain - ## HITS:1 COG:AGl3310 KEGG:ns NR:ns ## COG: AGl3310 COG0583 # Protein_GI_number: 15891774 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 302 5 291 298 157 32.0 2e-38 MSQPLPNKNLPMPSLRNIQAFIEVAATGSLNLAAENLNITASAVSHQIASLEHFLGKKLF SRSSKGVMLTAVGEKYLKEVSGALNMIGQATSQVINDIHQDYLRIHSAPSFGLLWLMPRL DKFRQAWPELKISLTCSYESIQFSRDNIDIDIRHGLSQWPTLLVRTIKNECVLPYSAASY LASHPVHAVEDLLACDLIHSDSTLINWSSWLSWHKVRGWHKNFIFNFDRSYMSIEAARMG MGVILESNLLAGGHVRQEQLTPVFDDERSMPVGAHHFVLPHANEQKEKVQRFFAWVAGEL KEEGFHI >gi|289776635|gb|GG745509.1| GENE 625 671322 - 672653 866 443 aa, chain + ## HITS:1 COG:BS_ycbE KEGG:ns NR:ns ## COG: BS_ycbE COG0477 # Protein_GI_number: 16077317 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 8 442 8 436 455 183 29.0 8e-46 MSRIDTLVCTDARKTKYRFVVLTMIFLVYAINYADRTNIGAVLPFIIDEFHINNFEAGAI ASMFFLGYAVSQIPAGFFIAKRGTRGLVSLSIFGFSAFTWLMGTVSSVFGLKLVRLGLGL SEGPCPVGLASTINNWFPPKEKATATGVYIAATMFAPIIVPPLAVWIAMTWGWRWVFFSF AIPGIVAAIAWYLLVKSKPSESGFVSQSELAEINAGRESHNNSVRENILIADRFTWLDKI IRVKKMAPIDTAKGLFTSKNILGDCLAYFMMVSVLYGLLTWIPLYLVKERGFDVMSMGFV ASMPCIGGFIGAIGGGWISDKVLGRRRKPTMMFTAVSTVVMMLIMLNIPASTLAVCIGLF FVGFCLNIGWPAFTAYGMAVSDSKTYPIASSIINSGGNLGGFVAPMAAGFLLDKTGSFNS VFTYFGICAAIGLVVILFLDEPQ >gi|289776635|gb|GG745509.1| GENE 626 672704 - 673453 254 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 244 1 238 242 102 29 4e-20 MLLKDKVAIITGAASARGLGFATAKLFADNGAKVVIIDLNGEASKTAAAALGEGHLGLAA NVADEVQVQAAIEQILAKYGRVDVLVNNAGITQPLKLMEIKRANYDAVLDVSLRGTLLMS QAVIPTMRAQKSGSIVCISSVSAQRGGGIFGGPHYSAAKAGVLGLARAMARELGPDNVRV NCITPGLIQTDITAGKLTDDMTANILAGIPMNRLGDAVDIARAALFLGSDLSSYSTGITL DVNGGMLIH >gi|289776635|gb|GG745509.1| GENE 627 673467 - 674312 1395 281 aa, chain + ## HITS:1 COG:SMc00270 KEGG:ns NR:ns ## COG: SMc00270 COG3959 # Protein_GI_number: 15965451 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Sinorhizobium meliloti # 9 278 15 284 284 402 73.0 1e-112 MKMTESQKVAAAAWRIRRYALQMGEVQGQGYIGQALGYADVLATAFSHAMTYRPEDPEWE GRDRFLLSHGHYAIAYYAALLEAGIIPEVELETYGSDDSRLPMSGMATYTPGMEMSGGSL GQGLSIAVGMALGLRQKQSTAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVDVNK QQADGDSRKILGFEPLQDKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVILCDT LMGKGVPFLETRDKNHFIRVDADEWQKAIAVLDANKPEGVL >gi|289776635|gb|GG745509.1| GENE 628 674312 - 675304 1338 330 aa, chain + ## HITS:1 COG:mll5764 KEGG:ns NR:ns ## COG: mll5764 COG3958 # Protein_GI_number: 13474796 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Mesorhizobium loti # 7 326 17 336 340 447 70.0 1e-125 MSQSQPRLKTSAMIASIADEGQATISAPFGVALSKLAAQRPEIVGMTADLSKYTDLHIFA QAFPDRFFQMGMAEQLLMAAAGGMAKEGFIPFATTYAAFATRRAYDFIHQVIAEEHLNVK ICAALPGLTTGYGPSHQATEDLAIMRGIPGMVIVDPCDALEIEQAVPAIADHQGPVYMRL LRGKVPLVLDKYDYQFELGKAKLLEDGNDVLIISSGLMTMRALEAVEKLRADNISVAVLH VPTIKPLDEKAIIEQASKPGRLVVTAENHTAVGGLGEAVAALLMRKGVRCELDTVGLPDA FLLAGALPTLHDRYGISTAKIVEKLKYRLR >gi|289776635|gb|GG745509.1| GENE 629 675520 - 676875 1688 451 aa, chain + ## HITS:1 COG:STM0820 KEGG:ns NR:ns ## COG: STM0820 COG0513 # Protein_GI_number: 16764183 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 438 1 435 454 698 88.0 0 MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVMQGRDLMASAQTGTGKTAGFTLPLL QRLIDKEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM KLRGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQNS APRRQDGEAPKARTQDGKPPRRRRPRKPAGE >gi|289776635|gb|GG745509.1| GENE 630 677063 - 679219 2638 718 aa, chain + ## HITS:1 COG:dinG KEGG:ns NR:ns ## COG: dinG COG1199 # Protein_GI_number: 16128767 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli K12 # 1 718 1 715 716 1320 91.0 0 MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVC PRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQDLDSYRWDGLRDHTDKAID DALWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAN PERLTGHCEELFELIASLNNILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTEMLR GLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWA TRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVL FASGRAMNRFLEHVTDLRLMLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS HHCWGEVVIYDKRLLTKNYGARLLNALPVFPIEQPGVPEVIVKRKAKQTAKQSGRKRR >gi|289776635|gb|GG745509.1| GENE 631 679249 - 680217 1167 322 aa, chain + ## HITS:1 COG:ybiB KEGG:ns NR:ns ## COG: ybiB COG0547 # Protein_GI_number: 16128768 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 322 1 320 320 516 77.0 1e-146 MEYSKIIKEVGRGKNHARDLDEETARALYARMLDGEVPELELGGILIALRIKGEGEAEMK GFYAAMQQHTLRLTPPAGKPMPIVIPSYNGARKQANLTPLLAMLLHKLGFPVVVHGVSHD PTRVLTETIFTLLDIPATRHAGQAQAQLEGHEPVYIPVGAFCPPLEKQLAMRWRMGVRNS AHTLAKLATPFGEAEALRLSSVSHPEYVPRVANFFRETGGRALLMHGTEGEVYANPQRCP QISLIDEQGVRVLYERQTETAAEAVVLPASKDPEVTARWIERCVAGVEPVPHSLKIQLAC CLLASGEVTTLEQGLSRVNDCW >gi|289776635|gb|GG745509.1| GENE 632 680326 - 680586 385 86 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1291 NR:ns ## KEGG: Ent638_1291 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 86 38 123 123 97 81.0 2e-19 MKNIKYAAAAIALTALSFGAFAAEPVTPAQAESMNKIGVVSAQGATTLDGLEAKLAAKAE AAGATGYSITSANTNNKLSGTAVIYK >gi|289776635|gb|GG745509.1| GENE 633 680872 - 681138 80 88 aa, chain - ## HITS:1 COG:STM0825 KEGG:ns NR:ns ## COG: STM0825 COG1734 # Protein_GI_number: 16764187 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 127 76.0 6e-30 MASGWAGDGAVQDQIDSTIDDAVARARRELPRGESNKFCDECGEPIPEARRQAIPGVRYC VKCQQEKDLHNNTFSGYNRRGSKDSQLR >gi|289776635|gb|GG745509.1| GENE 634 681159 - 681419 150 86 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3546 NR:ns ## KEGG: Kvar_3546 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 86 1 86 86 108 97.0 6e-23 MKITSLLFAAALTAHATAASPLPPTPVLPYAGPLRPVGTVSASGASTLDDLVAALADKAH RQGAIAWRVNAASSGNRLHGSAIIYQ >gi|289776635|gb|GG745509.1| GENE 635 681559 - 682173 534 204 aa, chain - ## HITS:1 COG:RSc1820 KEGG:ns NR:ns ## COG: RSc1820 COG1853 # Protein_GI_number: 17546539 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Ralstonia solanacearum # 1 201 6 206 207 243 60.0 2e-64 MYFYQPSQGHGLPHDPLNAIIGPRPIGWIASQDAEGQRNLAPYSFFNCFNYRPPIIGFAS SGWKDSVRNIVETKEFVWNLATRPLAVAMNETSASIPHDEDEFVRAGLTAAASRLVSAPR VAESPVNFECRLSQCIQLTTADGNPVDTWLVLGEVVAVHIDESLLDNGIYQTARAQPILR AGGPSAYYSIDDSLRFDMIRPDAR >gi|289776635|gb|GG745509.1| GENE 636 682270 - 683184 1046 304 aa, chain + ## HITS:1 COG:ybiN KEGG:ns NR:ns ## COG: ybiN COG3129 # Protein_GI_number: 16128775 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli K12 # 1 302 28 329 335 518 79.0 1e-147 MKAQKPGLHPRNRHHQRYDLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAQDSGEVPKQATILDIGTGANLIYPL IGVHEYGWRFTGSEISPEAFASAQAIVNGNPGLTRQIRLRRQKESQAIFHGVIHKNETYD ATLCNPPFHDSAESARAGGERKRRNLGLGADSALNFGGQQQELWCEGGEVAFISQMIRES QAFARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR RRPF >gi|289776635|gb|GG745509.1| GENE 637 683185 - 685380 2534 731 aa, chain - ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 428 729 1 301 311 504 90.0 1e-142 MPWILLLLAALFTAPLSAAALPGVPTANADKTSASEPDAEQKRAAYAALADVLANDSARQ ELIDQLRKAAATPPPDSTPTLTPPAVKEETTVLENVTQISREYGEQLSSRFSQLWRNITG SPHKPFNSQTFTSAAWHFLLLAGLVFAFWWLVRLAALPLYRKMGEWGRHKNRDRGNWLQL PLTIAGAFVIDLLLLALTLFVGQLLSDRLNGNNPTIAFQQSLFLNAFALIEFFKAILRLI FCPRIPALRPFNLSDEAASYWSLRLSALSSLIGYGLIVAVPIISNQVNVQVGALANVVIM LCITLWALYLIFHNKSLITQGLIHLADRSLSFFSLFIRAFALVWHWLACAYFVVLFFFSL FDPGNSLKFMMGATLRSLAIIGGAALVSGILSRWIAKTITLSPATQRNYPELQKRLNGWI SASLKAARILTVCVAVMLLLSAWGLFDFREWLHNDAGQKTVDVLIRIALILFFSAIGWTV LASLIENRLASDIHGRPLPSARARTLLTLFRNALAVVISTITVMILLSEIGVNIAPLLAG AGALGLAISFGAQTLVKDIITGIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDT GAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDLDKASQALKAAVDDLLAQEEIRGLI IGEPSFAGLVGLSNTAFTLRVSFTTLPLKQWTVRFALDTQVKKHFDRAGVRAPVQTWQQL PMPGSDSPAAE >gi|289776635|gb|GG745509.1| GENE 638 685493 - 686215 600 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 235 47 3e-60 MIEFKNVSKHFGPTQVLHDISLKINQGEVVVIIGPSGSGKSTMLRCINKLEEITSGDLIV DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKQAAEKQAKDL LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ DLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQELVKNPPSPRLREFLQHVA >gi|289776635|gb|GG745509.1| GENE 639 686212 - 686871 1102 219 aa, chain - ## HITS:1 COG:STM0829 KEGG:ns NR:ns ## COG: STM0829 COG0765 # Protein_GI_number: 16764191 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 366 96.0 1e-101 MQFDWSAIWPAIPILLEGAKMTLWISVLGLAGGLIIGLVAGFARCFGGWIANHIALVFIE IIRGTPIVVQVMFIYFALPMAFSDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGF REAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI IAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKIL >gi|289776635|gb|GG745509.1| GENE 640 686997 - 687743 1274 248 aa, chain - ## HITS:1 COG:STM0830 KEGG:ns NR:ns ## COG: STM0830 COG0834 # Protein_GI_number: 16764192 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 248 1 248 248 445 95.0 1e-125 MKSVFKVSLAALTLAFAVSSHAANKTLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKE LKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDGYYKSGLLVMVNANN NDIKDVKDLNGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTGRADAVLHDT PNILYFIKTAGNGKFKAVGESLEAQNYGIAFPKGSDELREKVNGALKTLRENGTYNEIYK KWFGTEPK >gi|289776635|gb|GG745509.1| GENE 641 688174 - 688677 746 167 aa, chain - ## HITS:1 COG:STM0831 KEGG:ns NR:ns ## COG: STM0831 COG0783 # Protein_GI_number: 16764193 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 289 92.0 1e-78 MSTAKLVKSKASNLVYTRNDVADSEKKATIELLNRQVIQFIDLSLITKQAHWNMRGANFI AVHEMLDGFRTALTEHLDTMAERAVQLGGVALGTTQVINSKTPLQSYPLDIHHVQDHLKA LADRYAVVANDVRKAIDEAKDEDTADIFTAASRDLDKFLWFIEANIE >gi|289776635|gb|GG745509.1| GENE 642 688915 - 689802 1126 295 aa, chain - ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 383 75.0 1e-106 MPGPSRKAAAWLPILVILIAMTSIQSGASLAKSLFPLVGAPGVTALRLALGTLILVVVFK PWRLRFSPAQRVPLLLYGLALGAMNYLFYLSLQRIPLGVAVALEFTGPLAVALFGSRRPL DFVWVALAILGLWYLLPLGQNVAQVDLTGALFALGAGACWAVYILTGQRAGEEHGPATVA MGSLIASLVFVPLGMAQATDTLWQWSLLPMGLGIAILSTALPYSLEMMALTRLPTRTFGT LMSLEPALAALSGMVFLGETLKLSQTLALGAIIIASMGATLTMQRQSKIEQVDIN >gi|289776635|gb|GG745509.1| GENE 643 690154 - 690669 556 171 aa, chain + ## HITS:1 COG:STM0833 KEGG:ns NR:ns ## COG: STM0833 COG3637 # Protein_GI_number: 16764195 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 246 84.0 1e-65 MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNP LGVIGSFTYTEKDNTSNGTYNKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNFPN QKSDMSDYGFSYGAGLQFNPIENVALDFSYEQSRIRNVDVGTWIAGVGYRF >gi|289776635|gb|GG745509.1| GENE 644 691257 - 692837 2218 526 aa, chain - ## HITS:1 COG:STM0834 KEGG:ns NR:ns ## COG: STM0834 COG2194 # Protein_GI_number: 16764196 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 4 525 3 525 526 863 79.0 0 MNVTTLKDTLVARRLALNPWTGFYFLQSLLINLALGYEFSLLYTVAFTCVLHLLWRAFPR VQKGVVGAYSLLAALYYPFGQAYGAPNFNTLLALHATNMEESTEILTIFPWYNYLLAVFI FALGIIAVRRRIVEPSHWGKMETLGLLFSVGIFFLQPVQNLAWGGVFKVIDTGYPAFRFV KDVVVNNNEVLDEQARMAQLAGMKDSWHVLAVKPKYHLYVVVIGESARRDALGAFGGHWD NTPFASSVNGYLFNNYVAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS NQGQIGEYDTAIASIAKRADEVQFLKNGDFEANKNTQDEQLLKLTEQVLSTQRTQPQLIV LHLMGSHPQACDRTKGKYTVFVQSKETSCYLYSMTQTDSLLAKLYSQLQNSGDTFSLTYF SDHGLAFKERGKEVQYLAHDDKFQQNFQVPFMVLSSDDKAHKVIKAQRSANDFLSFFSQW TGIKAAEIVPRYRFISEQKAGPVYITNFQLQKVDYAHLGTDEFTVN >gi|289776635|gb|GG745509.1| GENE 645 693106 - 693231 104 41 aa, chain - ## HITS:1 COG:no KEGG:KPK_3724 NR:ns ## KEGG: KPK_3724 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 41 1 41 41 77 100.0 2e-13 MNEFKRCLNVFSHSPFKVRLMLIGMLCEMINGKPQQGKPHS >gi|289776635|gb|GG745509.1| GENE 646 693417 - 693890 679 157 aa, chain + ## HITS:1 COG:STM0835 KEGG:ns NR:ns ## COG: STM0835 COG1321 # Protein_GI_number: 16764197 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 154 1 154 157 246 88.0 1e-65 MNRRAGKPITKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLINEVGEARQVDM AARLGVSQPTVAKMLKRLASVGLIEQIPWRGIFLTPEGEKLAQESRERHQIVENFLLAIG VSPEIARRDAEGMEHHVSEETLAMFLKFTQKQGSQEA >gi|289776635|gb|GG745509.1| GENE 647 693887 - 694999 1388 370 aa, chain + ## HITS:1 COG:STM0836 KEGG:ns NR:ns ## COG: STM0836 COG0471 # Protein_GI_number: 16764198 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 1 368 1 368 370 486 76.0 1e-137 MTLPFVQSLLRDRFLHLLLIIACVLSAIVPFVPASWPAAIDWHTIITLSGLMLLTKGIEL SGYFDVLGRKMARRFVTERQLAIFMVLAAALLSTFLTNDVALFIVVPLTLTLKKWCAIPV NRLIIFEALAVNAGSLLTPIGNPQNILLWGRSGLSFVGFIGEMLPLAAAMMLTLLVLCWF CFPANRLSYQSSDKAPSWQPKLVWSCLGLYLVFLTALEMNQALWGLALVLLGFLILARAV IVHVDWSLLLVFMVMFIDVHLLTQLPALHHVLSGVGTLSDGGLWLTAIGLSQVISNVPST ILLLNYVPPSILLAWAVNVGGFGLLPGSLANIIALRMASDRRIWWRFHLYSIPMLLWAAI SGYWLYKLCA >gi|289776635|gb|GG745509.1| GENE 648 695107 - 696147 1373 346 aa, chain + ## HITS:1 COG:AGl29 KEGG:ns NR:ns ## COG: AGl29 COG0667 # Protein_GI_number: 15890114 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 344 1 343 353 418 61.0 1e-117 MRYQKLGNTGLFVSELCLGTMTFGGEEGMWGKIGQLRQAEAEQLVGSALDAGINFIDTAN VYSEGRSEEITGQALKNLKIPRENVVVATKVFGETGTAGVNSRGSSRYHIMGSVKESLRR LQLDHIDLYQLHGFDPATPIEETLSALDTLVQQGHVRYIGVSNWAAWQIAKALGIAERLG LSRFASLQAYYTIAGRDLERELVPMLQSEGLGLMVWSPLAGGLLSGKYRRDGEAEAGGRR LAFDFPPVDKARAFDCIDVMRVIAEAKGVSVAQIALAWLLHQPAVTSVIIGAKRAEQLQD NIAATAIRLSDDELRQLDAVSALPREYPGWMLERQGEYRRHQLDAQ >gi|289776635|gb|GG745509.1| GENE 649 696304 - 697680 1680 458 aa, chain + ## HITS:1 COG:L32812 KEGG:ns NR:ns ## COG: L32812 COG2723 # Protein_GI_number: 15672801 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 458 1 452 453 513 52.0 1e-145 MKNTLPADFLWGNSVSSMQTEGAWNEGGKGMSVYDIRQPAEFASDWKVATDSYHRFREDF DLMQDLGMNCYRFQIAWSRVCPEGDGEFNEEGIAFYHQFIDELIARGIEPMICLYHFDMP LSLAERYNGFTDRRVMDAFIRYGQKMIDCYGDKVKYWLTFNEQNLYHSPEAFLITGYLRG DKTLRELYQIQHHVMMAHVHLTHYLHQTKPQCLMGGMLAHALVYPATCKPRDILYAQQLD EFLNQNLLRAYAGEGYSPEVMHFVARQGFDDIYRPEDIALMATVKVDYLAFSYYASRALN SDAIPPGTAVNNYMLFGNQDNPYLKATEWNWQIDPLGFRMIITRYYNDWRLPVFPIENGI GVIESWDGEHPIADDYRIAYHRDHINAMKAAIFEDGAQVIGYLGWGLIDILSSQGDMRKR YGVVYVNRENHDLKDLRRVPKKSYAWLKQVIHSNGEAM >gi|289776635|gb|GG745509.1| GENE 650 697748 - 698464 933 238 aa, chain + ## HITS:1 COG:lin0901 KEGG:ns NR:ns ## COG: lin0901 COG2188 # Protein_GI_number: 16799974 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 4 237 3 234 237 211 47.0 1e-54 MTAKYLQIAREIKKRIISQQYPASAPLPDQFALAAEFNTSRMTIQQAMRQLIVEGLIYTR KGLGTFVRKNFLQLSQWELPGSDYFGATKTWEHLGEVQSEVVRFEVRFPSDKEQSSLLID ADAPVYDFVRLRLLNGEPVSLDLTVMPVGLVPGLNKSHLHSSVFRYIQETLGLKLMGSYR VVRAMKPDELDKLHLHCDLTDPVLEVEQVIYLEDGTPLEYAHCHYRYDHGGIILVNNG >gi|289776635|gb|GG745509.1| GENE 651 698612 - 699526 1237 304 aa, chain - ## HITS:1 COG:ECs0896 KEGG:ns NR:ns ## COG: ECs0896 COG1376 # Protein_GI_number: 15830150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 304 3 306 306 548 90.0 1e-156 MKLSTLLAAAFALVGFCNTASAVTYPLPTDGSRLVGQNQVITIPDDNKQPLEYFAAKYQM GLSNMLEANPGVDTYLPKGGSVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIV LPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYAAAGNPLPAVVPAGPDNPMGL YALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKATT EPDGSRYIEVHNPLSTTEAQFQGGEIVPITLTQPVQAITSQSDVDQNVVEQAIQNRSGMP VRLN >gi|289776635|gb|GG745509.1| GENE 652 699727 - 700512 860 261 aa, chain - ## HITS:1 COG:YPO3785 KEGG:ns NR:ns ## COG: YPO3785 COG2365 # Protein_GI_number: 16123919 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Yersinia pestis # 1 260 1 276 276 221 43.0 1e-57 MTTSLPRHPAFLSLQGGINFRDLGGQRAADGRTVRSGKLLRSGALNRLTADDLNHLATLP LSRVLDYRDPGEVQRTPDKLSPLTHYLNAPANPPLGDVNAKVTELNAATLNALNGEQFML QLYRQLPFNNPAYRQLAAWLTTPFEGALLQHCAVGKDRTGVGCALTLFAVGCDSETVMEE YLLTHGMLTQVEAWMLEMLGNDLTSQGRQSLADILTVKESYLAAALSAIHQRYGTVDAWL AEEYQLTAPARASLQDRLLEG >gi|289776635|gb|GG745509.1| GENE 653 700691 - 702283 2334 530 aa, chain + ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 530 1 530 530 1022 96.0 0 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL DPNERIGKLRQDQFAFEAFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLE VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLD EPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS SRQNPFIRFEQDKKLFRNALEVEALTKGFDEGPLFKKVNLLLEVGEKIAILGANGVGKST MLKTLVGELQPDNGTVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQWKQESDDEQAVRS ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA LEMYQGTLIFVSHDREFVSSLATRVLEITPERVIDFSGNYEDYLRSKGIE >gi|289776635|gb|GG745509.1| GENE 654 702660 - 705023 3247 787 aa, chain - ## HITS:1 COG:YPO0848 KEGG:ns NR:ns ## COG: YPO0848 COG1501 # Protein_GI_number: 16121156 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Yersinia pestis # 1 782 2 783 792 1219 74.0 0 MKTLKHWSLHQQLEHHVELTVDGQHTLCLYVLEENLFRVLLKRQGQLALERTWSIAPQQD VPWEGRARDDLSGFSLPAWQMTKEDDALTIATRQLRVTVHQPLWLEWSYRDDAGEWQTLA SDRPTSAYLANAHGDGVAHYLSRRKDERFYGLGEKAGDLQRNGKRYEMRNLDAMGYNAVS TDPLYKHIPFTITQRSDISYGLFYDNLSSCWLDLGNEIDNYHTAYRRWQAEAGDIDYYLF TGKQVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHYTDAPDAQNQLMNFIRLCEQHAIPC DSFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSQSFHDAGLKLAANIKPCLLQDHPRYGE VAERGLFIRDSQTDAPERSSFWDDEGSHLDFTNPHTVAWWQEGVTTQLLEMGIDSTWNDN NEYEVWDGEARCYGFGREIAIKHIRPVMPLLMMRASMEAQQRFAPQKRPYLISRSGCAGM QRYVQTWSGDNRTNWATLRYNIRMGLGMSLSGLFNVGHDVGGFSGDKPEPELFVRWVQNG VMHPRFTIHSWNDDQTVNEAWMYPEITPAIRSAIELRYRLLPYLYTLLWQAHADDEPMLR PTFLDHQHDTQTFAECDDFLLGRDLLVASVVEPGARQRQLWLPDNQDGWYDFYSHQWFAG GQWVTLDAPLEKLPLLVRAGAGLPLSERISHVDAQKDDRRELQLFPLKGTGSTRGLLFED DGESWGYKEGDALWLEWEMICSANSINLNINARGSYRPAWKALKLSLPAGEKRKLLVNGV EGTEWRR >gi|289776635|gb|GG745509.1| GENE 655 705039 - 706340 1766 433 aa, chain - ## HITS:1 COG:YPO0847 KEGG:ns NR:ns ## COG: YPO0847 COG0477 # Protein_GI_number: 16121155 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 15 431 14 430 435 614 76.0 1e-175 MSQGLNNDIAVSKTRRVVKNLRWWVLVLFLLGVTVNYITRNSLGIIAPELKATLGITTEQ YSWIVGAFQLAYTIFQPLCGWLIDVIGLKLGFMICATLWALACIAHAGAGSWLHLAMLRF FMGGAEAAATPANAKTIGEWFPKSERPIAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGA FMFTGALALLWVVLWWAFYQNPEKHPNLSKSELEYIKQDNEAPPVKQPFFTALKTVSKNK RFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVVSGYLT RLYVRWFGCTRVNSVIASSVTGAFLMISLALVAITRDPYITIILISIGGFGHQIISCMLS ALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLIGAVF LVAFIAERRAKRA >gi|289776635|gb|GG745509.1| GENE 656 706640 - 707713 1405 357 aa, chain + ## HITS:1 COG:YPO0846 KEGG:ns NR:ns ## COG: YPO0846 COG1609 # Protein_GI_number: 16121154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 348 1 349 360 392 55.0 1e-109 MDKKLRVAEIAARTGLSASTVSRVLAGKANTSDKARRAVLECARELGVMQGLAAGRLLLN NLLVFAPQRAFDERSDIFYYRVIQSINNALAAHEVRLRYCALDENDSDANLFLARMNEAE TQAAVLLGIDDPHIHGLAADVGKPCVLINCRDEGMRLPSIAPDHRLIGQCAARYLFDMGH RAVMNVMCLRRYTMELRLGGIQEAWRARNLRFTASRDLISVANFSARETEEQVGAWLDAL QGRPMPTAFLVGGDFMAAGTVSALQKRGLRVPQDVSVMSIDGFNLAAIQEVPLTAVHVPR DELGSEAVHLLQQRLLRPEAPHGSLLLHGTLVVRDSVRRIRPGKGHTAVEPQGLYDD >gi|289776635|gb|GG745509.1| GENE 657 707710 - 708975 1472 421 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3523 NR:ns ## KEGG: Kvar_3523 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 421 1 421 421 862 100.0 0 MAALPTHETLPADHKAAIRQMKQALRAQIGDVQAVFDKLSARISERLDEINALKATGQEV WPTIPFSDIAEGKVSDEQRAAIKRRGCAVIKGHYPREQALAWDNAMLEYLDLNHFDDVYK GPGDSFFGSLEASRPEIYPIYWSPSQMQARQSDEMAAVQSFLNRLWRFEQNGKRWFDPDV SVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFANVFNGNIDAYDPWDAAHR TEVEEYTVDNTTKCSVFRTFQGWTALSDMIPGQGLLHVVPIPEAMAYVLLRPLLDDVPED ELCGVAPGRVLPISEQWHPLLIKALSSIPALNAGDSVWWHCDVIHSVAPVENQQGWGNVM YIPAAPMCEKNLAYAQKVKIALEKGASPGDFPREDYEASWQGRFTLEDLNIHGKRALGIP V >gi|289776635|gb|GG745509.1| GENE 658 709116 - 709931 1106 271 aa, chain - ## HITS:1 COG:ybiV KEGG:ns NR:ns ## COG: ybiV COG0561 # Protein_GI_number: 16128790 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 271 1 271 271 467 81.0 1e-131 MTVKVIVTDMDGTFLNDAKTYDRSRFLAQFAQLQQRGIEFVVASGNQYYQLISFFPEIRE QISFVAENGALVFEHGKQLFHGELTRHESQVVIGELLKDPQLNFVACGLQSAYVSDKAPD AFVDLMSKHYHRLQRVSDYHRIDDTLFKFSLNLPDSEIPQLIDKLHVSLDGIMKPVTSGF GFVDLIIPGLHKANGISRLLKRWNLSPQQCVAIGDSGNDAEMLKLVKYAFAMGNAADTIK AIAGYATDDNNHDGALNVIQAVLDNTAPFNA >gi|289776635|gb|GG745509.1| GENE 659 710112 - 712544 3336 810 aa, chain - ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 810 1 810 810 1599 93.0 0 MTTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQQHLDKPIPVRRALALAHHL AERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVL HEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDG MRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRR HELLTIAENCDIIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD VELQQSLDREQAIELLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPQ DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQ VFLPQEHALSKGNFANFDQVLADWDNQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFD GLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDELKQYHNPRYGRGPIGGNYYAG TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGG VLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDL VVRVAGYSAFFTALSPDTQDDIIARTEHTL >gi|289776635|gb|GG745509.1| GENE 660 712549 - 713448 1145 299 aa, chain - ## HITS:1 COG:ybiY KEGG:ns NR:ns ## COG: ybiY COG1180 # Protein_GI_number: 16128792 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 299 10 308 308 483 77.0 1e-136 MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARSEDLLYDSRLCLAGCDLCQQ AAPEVITRTLDGLIIDRQNVNDKHITALRDCCPTTALTVCGEEKNVEAIMATVLRDKPFY DRSGGGITLSGGEPFMNPTLAQALFEASHQAGIHTAVETCLHVPWKYIEPALPFVDLFLA DLKHVDEAVFQQWTDGSARRVLDNLQRLAQAGKKMIIRVPLIQGFNASEADIAAITDFAA DRLQVSEIHFLPYHTLGMNKYQLLSQPYTAPDKPLDAPELLAFAQDYARSKGLTAILRG >gi|289776635|gb|GG745509.1| GENE 661 713603 - 714358 909 251 aa, chain - ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 4 249 3 248 249 429 84.0 1e-120 MAVELSDEEMLRYNRQIVLRGFDFDGQERLKAARVLVVGLGGLGCAAAQYLAAAGVGQLT LLDFDTVSLSNLQRQTLHSDATIGQPKVDSAREALARINPHVRLVPLNALLDETALAGQI ADHDLVLDCTDNVAIRNQLNAGCFQHTTPLVSGAAIRMEGQISVFTYQDGEPCYRCLSRL FGENALTCVEAGVMAPLVGTIGSLQAMEAIKLLTGYGTPASGKIVMYDAMTCQFREMKLM RHPQCEVCGSH >gi|289776635|gb|GG745509.1| GENE 662 714358 - 715593 1607 411 aa, chain - ## HITS:1 COG:STM0846 KEGG:ns NR:ns ## COG: STM0846 COG0303 # Protein_GI_number: 16764208 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 411 3 413 413 659 80.0 0 MDFTAGLMPLDTALAQMLDRITPLNATETVPLLQAFSRVTAHDIVSPLDVPGFDNAAMDG YAVRLSDLRDGAALPVAGKAFAGQPFNDAWPTGTCIRIMTGAPVPAGCDAVVMQEETEQT DAGVRFTAPVKAGQHIRRRGEDIAHGAVVFPAGTPLTVAELPVLASLGIAEVEVVRKVRV AVFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLQQLGYEVINLGIIPDDPAKLRDAFIAA DQQADVVISSGGVSVGEADYTKTILEELGEIGFWKLAIKPGKPFAFGKLSSSWFCGLPGN PVSATVTFCQLVQPLLAKLSGKHGPLQATRLRVRAATRLKKSPGRLDFQRGILQRNPDGE LVVTTTGHQGSHIFSSFSLGNCFIVLERERGHVEAGEWVEAEPFNHLFGGL >gi|289776635|gb|GG745509.1| GENE 663 715829 - 716770 1133 313 aa, chain + ## HITS:1 COG:ybiK KEGG:ns NR:ns ## COG: ybiK COG1446 # Protein_GI_number: 16128796 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Escherichia coli K12 # 1 313 1 313 321 473 81.0 1e-133 MGKAVIAIHGGAGAISRAQMTPEREREYVAALSTIVESGQKMLAAGASALDTVTEAVRLL EECPLFNAGMGAVFTHDQTHELDACVMDGYSLQAGAVAGVKHLRNPVLAARLVLEESPHV LLIGEGAENFAFSRGMERVENDLFSTPERLLQLQEAKAGGEIILDHHAAPLDERQKMGTV GAVALDLAGNLAAATSTGGMTNKLPGRVGDSPLPGAGCYANNASVAVSCTGTGEVFMRTL AAYDIAALMEYGQLSLYTACERVVMEKLPALGGSGGLIAVDREGNVVLPFNSEGMYRAWC YAGDTPTIGIYRE >gi|289776635|gb|GG745509.1| GENE 664 716788 - 718647 810 619 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 12 569 8 528 563 316 34 1e-84 MSQTHETDTCEVLVVRNLNVAFRQQDAPEVQAVRQLSFSLRRGETLAIVGESGSGKSVTA LALMRLLDAASSEVSSEGLWLRRRNRQVIALNEQTDAEMRRVRGADLAMIFQEPMTSLNP VFTIGEQIAESLRLHQGLGREEALRAAKKMLDQVRIPQAEEMLSRYPHQLSGGMRQRVMI AMALSCRPAVLIADEPTTALDVTIQAQILQLIAVLQKEMAMGVIFITHDMGVVADIADRV LVMYRGEAVETGSVEEIFRSPQHPYTQSLLAAVPRLGEMRGQDLPRRFSLPGQPQAETET PDTVAAGEPILQVRDLVARFPVRGGLLNRVTREVHAVEKISFDLWPGETLSLVGESGCGK STTGRALLRLVETQGGTITFDGQRIDTLSGSKLQSLRRNIQFIFQDPYASLDPRQTVGDS IMEPLRVHGLLHGEAARERVSWLLKRVGLQPEHAWRYPHAFSGGQRQRICIARALALNPK VVIADESVSALDVSIRAQIINLMLDLQREMGIAFLFISHDMAVVERISHRVAVMYRGRIV EIGPRRAVFENPQHPYTRKLMAAVPVADPAYRHPQRVLLSDDVPGNIYKRGEEMASVPLQ QVGPDHFVARESADVLGRA >gi|289776635|gb|GG745509.1| GENE 665 718680 - 720221 2088 513 aa, chain + ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 511 1 511 512 872 88.0 0 MTQPVSRKWWLALSIAAALASAPAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ GLFGLDKEMKLQNVLAESYTVSPDGLVYTIKLHSGVKFQDGTDFNAEAVKANLDRASNPD NHLKRYNLYKNIASTEAVDPTTVKITLKQPFSAFINILAHPATAMISPAALKKYGKDIGF HPVGTGPYKLDTWNQTDFVKVSKFDGYWQPGLPKLDSITWRPVVDNNTRAAMLQTGEAQF AFPIPYEQAPLLAKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQALVK VAFAGYATPATGVVPPSIAYAQTYTAWPYDPAKARQLLKEAGYPNGFSTTLWSSHNHSTA QKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWAL SPLFASQNWPPTLFNTAFYSNPQVDNALSEALKTTDPQEKTKLYKEAQDIIWKESPWVPL VVEKLVSAHSKNLTGFYIQPDTGFSFEQADLTP >gi|289776635|gb|GG745509.1| GENE 666 720294 - 721214 1150 306 aa, chain + ## HITS:1 COG:STM0850 KEGG:ns NR:ns ## COG: STM0850 COG0601 # Protein_GI_number: 16764212 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 306 1 306 306 528 92.0 1e-150 MLNYVIKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLIAGPEADAQVVAMVRQQLGLDQP LHVQFWHYITNVLRGDFGISMASRRPVSSEIASRFMPTLWLTLASMSWAVLFGMAAGIAA AVWRNRWPDRLGMALAVSGISFPAFALGMLLMQVFSVELGWLPTVGADSWRHYILPSLTL GAAVAAVMARFTRASFVDVLHEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLVVDVLYAAIN PAIRYK >gi|289776635|gb|GG745509.1| GENE 667 721222 - 722127 986 301 aa, chain + ## HITS:1 COG:ECs0911 KEGG:ns NR:ns ## COG: ECs0911 COG1173 # Protein_GI_number: 15830165 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 301 3 303 303 497 87.0 1e-140 MLNWRRQAALNAMPGIRPGEIHTPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAP YDAENYFDYDRLNEGPSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVL GLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARL VRGNTLVLKQQTFIESARSIGASDATILFNHILPGTVSSIVVYFTMRIGVSIISAASLSF LGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFVTVLAFNLLGDGLRDALDPKLK G >gi|289776635|gb|GG745509.1| GENE 668 723373 - 724698 1337 441 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase [Meiothermus ruber DSM 1279] # 22 441 1 420 442 519 61 1e-145 MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPTYDNADMVIVNTCGFIDSAV QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYSPKP KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR LADAGVKELLVISQDTSAYGVDVKHRTGFHNGMPVKTSMVSLCEELAKLGIWVRLHYVYP YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLARIKQWREICPDLTL RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW NRFMQLQQQISAERLQEKVGREILVLVDEVDEEGAIGRSMADAPEIDGAVYLNGETRVKP GDVVRVKVEHADEYDLWGTRV >gi|289776635|gb|GG745509.1| GENE 669 724944 - 725846 879 300 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3511 NR:ns ## KEGG: Kvar_3511 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 300 1 300 300 555 99.0 1e-157 MTPTGSPVAIATLPFSNLEIPPQPPQIQHSLEQGNVLYLPQLAFSLTAPEQALLTPELVA PRRKNISYQPDTRTLRGVADKQKTAAIARLMARYHQMTLQLIDALLPGYGEALHHPQTSL RLHPITAWRETTSWRKDDSRLHVDAFPSRPVKGDRILRIFCNIHPRGEPRTWRTGEHFDT LAARFLPRLKPWSPSGAWLLAALGITKSRRSHYDHLMLALHDAMKSTPEYQRQGVQQEID FAAGSTWICFSDQTPHAAMRGQYLLEQTFLLPVKAMSHPQLSPLRVLETLLQKPLVARNV >gi|289776635|gb|GG745509.1| GENE 670 725859 - 727115 1738 418 aa, chain - ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 8 397 12 403 415 264 38.0 2e-70 MTPGKRNYLLLSLFDFLYLFAWSSTMAFFVIWTTQHLGISATKTGLLYSVNAFIALLMQP FFGFISDKFGLKKRLIWLLVALLLPVGPFFIYVYAPLLVHNFWFGALLGGIYLGIIFNSG CGVIDSYIDKISRRYQFEYGRVRMWGSLGWAAAAWIVGKYIDSNPNLAFWLASLAIVIAA ICFMLTKIELTDADVARSESLKVSHALELAKNGQFWMLLLFTLFVTQIYDTYDQQFAQYF SLQFPTPEEGNRWYGILASIQVCGETLFLCLMPWFVNRTGAKWALIIAGLIMSVRIVGSA VPLGPVWIGAVKMMHALEKPLILVSVFKFIAANFDHKLSSTVYLLVLFVASIATAIYSPL AGYLYDTIGFADTYLILGGIAGLFTLISIFTLKDKREPKKPSARPSGAVTPAQSSSAR >gi|289776635|gb|GG745509.1| GENE 671 727494 - 727877 254 127 aa, chain + ## HITS:1 COG:no KEGG:KPK_3696 NR:ns ## KEGG: KPK_3696 # Name: bssR # Def: biofilm formation regulatory protein BssR # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 127 13 139 139 243 100.0 1e-63 MTVDRQYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRL QNVVSPEEKEALRLAGESLAAAAVCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNK LSPITHA >gi|289776635|gb|GG745509.1| GENE 672 727993 - 729102 1396 369 aa, chain + ## HITS:1 COG:ECs0917 KEGG:ns NR:ns ## COG: ECs0917 COG2133 # Protein_GI_number: 15830171 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli O157:H7 # 4 367 9 369 371 542 72.0 1e-154 MRPIPLLLILSALALPALSQAAVRVEVLQNRLAHPWGLAFLPDDQGMLITLRGGELKRWQ PGKGLSAPISGVPQVWANGQGGLLDVALSPDFAQSRRVWLSYAESDASGKAGTAVGYGRL SEDATQLSNFTVVFRQQPKLSVGNHFGGRLVFDGKGYLFIGLGENNQRATAQELSKLQGK VVRLTESGDVPPDNPFVGRADARPEIWAYGIRNPQGMAMNPWSDALWLNEHGPRGGDEIN IPQAGKNYGWPLATHGINYSGLPIPEAKGKTAPGTEPPLYVWPVSPGVSGMAFYAAQTFP QWQHKLFIGALKETSLIVLSVDGNQVREEGRLLEARGKRIRDVRVGPDGYLYVLTDESNG ELLRLSPEG >gi|289776635|gb|GG745509.1| GENE 673 729105 - 729731 841 208 aa, chain - ## HITS:1 COG:STM0862 KEGG:ns NR:ns ## COG: STM0862 COG0625 # Protein_GI_number: 16764224 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 309 72.0 3e-84 MITLWGRNNSTNVKKVRWVLEELDLPYEQILAGLEFGLNHDPEYLAMNPNGLVPLLKDDA TGVVLWESNTIIRYLAAQYGVDRLWLAAPAQRAQGEKWMDWSNGTLSPAHRPVLMGLVRT PPEQRDPAVIAAGIGACESLFAMLDDELAKTPWLSGEHFGLGDIAVAPFVYNLLTILDTW QPRPHLQRWYQQISQRPAWHAVVKIPVT >gi|289776635|gb|GG745509.1| GENE 674 729978 - 731189 1650 403 aa, chain + ## HITS:1 COG:ECs0919 KEGG:ns NR:ns ## COG: ECs0919 COG1686 # Protein_GI_number: 15830173 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 11 403 8 400 400 690 86.0 0 MALMMHDAFSLRGLAAGCALLFLVAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGN ADEKLDPASLTKIMTSYVVGQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGM QVSVEDLNKGVIIQSGNDASIAIADYVAGSQDAFVSLMNGYAKKMGLTNTTFMTVHGLDA PGQFSTARDMALLTKAMIHDVPEEYAVHKEKEFTFNKIRQPNRNRLLWSTNLNADGVKTG TTAGAGYNLVSSATQGDMRLIAVVLGTKTDRIRFNESEKLLTWGFRFYETVTPIKPDATF VTQRVWFGDSSEAKLGAGEAGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTIDFK LNDKTIEQRPLIVMEPVKEGGFFSRMIDFVLMKLHGWFGSWFS >gi|289776635|gb|GG745509.1| GENE 675 731229 - 731987 944 252 aa, chain - ## HITS:1 COG:ECs0920 KEGG:ns NR:ns ## COG: ECs0920 COG1349 # Protein_GI_number: 15830174 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 407 75.0 1e-114 METRRDERISQLIQALKRSDKLHLKEAASLLGVSEMTIRRDLNGHSGPVVLLGGYIVLEP RSATHYLLSDQKTRLVEEKRRAARHAAALLEAHQMAFFDCGTTTPWIIDAIDDALPFTGV CYSLNTFLALQEKPQCRAVLCGGEFHASNAIFMPLSLEDTLSHLSPDIAFYSAAGIDCEQ GATCYNLEELPVKHWAMRHARYHVLVVDHSKFGKVRPARMGALAKFDVIASDICPDDELV ALAKAQQISLLY >gi|289776635|gb|GG745509.1| GENE 676 732090 - 732683 933 197 aa, chain - ## HITS:1 COG:STM0865 KEGG:ns NR:ns ## COG: STM0865 COG0671 # Protein_GI_number: 16764227 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 196 1 201 202 270 71.0 2e-72 MLENINYALFALINATPASPQWAIEVAILIAKDLILIVPLLVVTLWLWGPAQRQMVFKLM LALMISLTVSWAIGHLYPHDRPFVAGVGYNFLHHAADDSFPSDHGTVSFTFALAFLFWHR LWSGALLMVIAAAIAWSRVYLGVHWPLDMVGGLLAGMCGCLGAALIWHTFGPALYRQLQR LYRLCFSLPIRKGWVRG >gi|289776635|gb|GG745509.1| GENE 677 733010 - 734242 1887 410 aa, chain + ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 644 87.0 0 MQNYSLSGRRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVQEFQVGNEWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLTGVVWFIVTCLATLLAQTIEQFTLLRFLQGISLC FIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWVHVLPWEMMFVLFAVL AAISFVGLQRAMPETATRLGEKLSVKELGRDYRLVLKNLRFVAGALATGFVSLPLLAWIA QSPVIIISGEQATSYEYGMLQVPIFGALIAGNLVLARLTSRRTVRSLIIMGGWPIMFGLI LSAAATVVSSHAYLWMTAGLSFYAFGIGLANAGLVRLTLFASEMSKGTVSAAMGMLQMLI FTVGIELSKHAYELGGNGLFSLFNLLGGVLWLGLMIYFLKDKSVGNSQQA >gi|289776635|gb|GG745509.1| GENE 678 734285 - 735097 1002 270 aa, chain - ## HITS:1 COG:STM0867 KEGG:ns NR:ns ## COG: STM0867 COG0561 # Protein_GI_number: 16764229 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 269 1 269 271 385 71.0 1e-107 MSIKLIAVDMDGTFLSDAKTYNRPRFLAQYQRMREQNIRFVVASGNQYYQLISFFPEIAH QIAFVAENGGWVVSGNEDVFNCQLPLHHFNAVVDHLQTLPNIEIIACGKRSAYTLNRYND ALKTVAAKYYHRLELVDDFNHLDDAILKFGLNVPDSLIPEIQPKLHAALGDMVTAVATGY GSIDLIMPGVHKANGLRILQQRWGIEDHEVVAFGDSGNDIEMLQHAGFGFAMANAREDVK AVASHHAPHNNEEGVLQIIDKVLNREAPFA >gi|289776635|gb|GG745509.1| GENE 679 735097 - 736299 1695 400 aa, chain - ## HITS:1 COG:ybjJ KEGG:ns NR:ns ## COG: ybjJ COG0477 # Protein_GI_number: 16128813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 400 1 402 402 540 80.0 1e-153 MTTQTSRRALQLRLWALFMFFFIPGLLMASWATRTPAIRDQLMLSTAEMGVVLFGLSVGS MSGILCSAWLVKRFGTRKVIRTTMSFAVLGMLVLSLALWVSSAPLFAFGLAIFGASFGSA EVAINVEGAAIEREMNKTVLPMMHGFYSFGTLFGAGVGMAVTGFGLPAAPHILAAALVAI LPIAIAIRAIPDGTGKNAAEAAHGEAKGLPVWRDAQLLLIGVIVLAMAFAEGSANDWLPL LMVDGHGFSPTSGSLIYAGFTLGMTLGRFTGGWFIDRYSRVTVVRGSAVMGALGIGLIIF VDNPWVAGISVLLWGIGASLGFPLTISAASDTGPDAPKRVSVVAITGYLAFLVGPPLLGF LGEHFGLRSAMMVVLGLVMVAALVARAVAKPQSEPVMENS >gi|289776635|gb|GG745509.1| GENE 680 736382 - 736945 729 187 aa, chain + ## HITS:1 COG:STM0869 KEGG:ns NR:ns ## COG: STM0869 COG3226 # Protein_GI_number: 16764231 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 3 179 7 183 206 228 64.0 4e-60 MARRPNDPQRRERILQATLDTIAAHGVQAVTHRKIALCANVPLGSLTYYFSGIEALVEEA FSLFTAEMSAQYQQCFAGVTNRQQACDAIAELIFSAQVTTARNMELMYQLYAFCSSQPAL KGVMQNWMRRSQQTLEQWFAPDTARGLDAFIEGMTLHFVTDRAPLSKAAIRLLVGQLAGE RAQEEER >gi|289776635|gb|GG745509.1| GENE 681 737125 - 738819 2405 564 aa, chain - ## HITS:1 COG:STM0870 KEGG:ns NR:ns ## COG: STM0870 COG2985 # Protein_GI_number: 16764232 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 4 563 1 560 561 1004 94.0 0 MAFVNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFAI NTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSAMLIATVLGKVFGWD IGLTAGMLAGAMTSTPVLVGAGDTLRHFGLPSDQLAQSLDHLSLGYALTYLVGLVSLIVG ARYMPKLQHQDLQTSAQQIARERGLDTDSKRKVYLPVIRAYRVGPELVAWADGKNLRELG IYRQTGCYIERIRRNGILANPDGDAVLQMGDDIALVGYPDAHARLDPSFRNGKEVFDRDL LDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQV SGDARRVKTVADRIGFISIHSQVTDLLAFCAFFIVGLMIGMITFQFSSFSFGIGNAAGLL FAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGAGINNGLGAVGGQMLA AGLIVSLLPVVICFLFGAYVLRMNRAMLFGAMMGARTCAPAMEIISDTARSNIPALGYAG TYAIANVLLTLAGTLIVIIWPGLQ >gi|289776635|gb|GG745509.1| GENE 682 739078 - 739461 348 127 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3498 NR:ns ## KEGG: Kvar_3498 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 127 1 127 127 192 100.0 3e-48 MKSERSWAGIICGFVLFIVVCLSLLLHMKGAFRASGNPELGLLFFLLPGAAASCLSPGQR VLRPLLGAMLAAPVCMVTMRLFFVTHRTFWQEMAWVLSAVFWCALGALCFLFICAWLDTW RSHSSSK >gi|289776635|gb|GG745509.1| GENE 683 739468 - 739731 469 87 aa, chain - ## HITS:1 COG:STM0872 KEGG:ns NR:ns ## COG: STM0872 COG0695 # Protein_GI_number: 16764234 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 87 1 87 87 177 94.0 3e-45 MFTVIFGRPGCPYCVRAKELAEKLTNERDDFNYRYVDIHAEGISKADLEKTVGKPVETVP QIFVDQKHIGGCTDFEAWAKENLGLFA >gi|289776635|gb|GG745509.1| GENE 684 739934 - 740221 400 95 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3496 NR:ns ## KEGG: Kvar_3496 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 95 1 95 95 155 100.0 6e-37 MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA IVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH >gi|289776635|gb|GG745509.1| GENE 685 740205 - 740927 958 240 aa, chain + ## HITS:1 COG:mdaA KEGG:ns NR:ns ## COG: mdaA COG0778 # Protein_GI_number: 16128819 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli K12 # 1 240 1 240 240 406 84.0 1e-113 MTPTIELLRSHRSIRHFTDAPVSDEQRAEIIASAQAASTSSFLQCTSIIRITDPALREQL VPLTGGQQHVAQAAEFWVFCADFNRHLQICPQAQLGLAEQLLIGVVDTALLAQNALIAAE SLGLGGVYIGGLRNSIEAVTELLALPQHVLPLFGLCLGWPADNPDIKPRMPAAMLVHENH YQPLDNALLADYDEQLAHYYLSRGSNARRDTWSDHIRRTIVKESRPFILDYLHKQGWATR >gi|289776635|gb|GG745509.1| GENE 686 741042 - 741944 1502 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206580421|ref|YP_002239499.1| ribosomal protein S6 modification protein [Klebsiella pneumoniae 342] # 1 300 1 300 300 583 100 1e-165 MKIAILSRDGTLYSCRRLREAAQQRGHQVEILDPLSCYMNVSPVASSIHYKGRQLPHFDA VIPRIGSAITYYGTAALRQFELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIA HSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI AEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL GLDVAGVDILRATRGPLVMEVNASPGLEGVETTTGVDIASRMIAWIERQATPEFCLKIGG >gi|289776635|gb|GG745509.1| GENE 687 742033 - 742512 509 159 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3493 NR:ns ## KEGG: Kvar_3493 # Name: not_defined # Def: sensory transduction regulator # Organism: K.variicola # Pathway: not_defined # 1 159 1 159 159 310 100.0 1e-83 MDSLVVPGLDTLRRWLDEIGISFFECDSCQALHLPHMQNFDGIFDAKIDLVDNVVLFSAL AEVKPSALLALSADLSAINASSLTVKAFIDIQDDNLPKLVVCQSLSIGPGVTMEQFAWFF RQSEEQISMVILEAGANQLLYKGEEEEPAAENVQYHFLH >gi|289776635|gb|GG745509.1| GENE 688 742861 - 743973 1550 370 aa, chain + ## HITS:1 COG:potF KEGG:ns NR:ns ## COG: potF COG0687 # Protein_GI_number: 16128822 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 370 1 370 370 682 90.0 0 MTAFGKKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYD VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLV AKHDPENKYAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFL DAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV AIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLM RPDVIAKISDQVFYANGNKASTPLVSETIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRT RAWTKVKSGK >gi|289776635|gb|GG745509.1| GENE 689 744089 - 745270 1374 393 aa, chain + ## HITS:1 COG:potG KEGG:ns NR:ns ## COG: potG COG3842 # Protein_GI_number: 16128823 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 17 393 28 404 404 706 91.0 0 MAPDHMVIVFLPESTRLNDVMPRPQAKAPKALTPLLEIRNLTKSFDGQHAVDDVSLTIYK GEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLARVPPYQRPINMMFQSYALFP HMTVEQNIAFGLKQDRLPKAEITARVQEMLALVHMQEYAKRKPHQLSGGQRQRVALARSL AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMN RGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGLVKERLEDGLVLSSPGLVHPLKVDPD ASVVDNVPVWVALRPEKIMLCDEPPADGYNFAVGEVIHIAYLGDLSIYHVRLQSGQMISA QLQNEHRHRKGTPTWGDEVRLCWDADSCVVLTV >gi|289776635|gb|GG745509.1| GENE 690 745281 - 746234 1579 317 aa, chain + ## HITS:1 COG:STM0879 KEGG:ns NR:ns ## COG: STM0879 COG1176 # Protein_GI_number: 16764241 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 511 90.0 1e-145 MSTVESPSGAKKPGGFGLWAARLQMAHGRKLVIALPYLWLILLFMLPFLIVFKISLAEMA RAIPPYTELMEWADGQLTLTLNFANFLQLTDDPLYFEAYLQSLQVAGISTICCLLLGYPL AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGLLKSNGVLNNFLLWLGVIDQPLEI LHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFQVIVPLTKGG IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIVMLLLLIV PIMWFHKHQQKQMGEQG >gi|289776635|gb|GG745509.1| GENE 691 746231 - 747076 1155 281 aa, chain + ## HITS:1 COG:STM0880 KEGG:ns NR:ns ## COG: STM0880 COG1177 # Protein_GI_number: 16764242 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 457 95.0 1e-129 MNDLPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELFHDDA MMSAVGLSLTIAACAATAAAILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLS LLLLFVALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVISSRLRELDHSIEEAAMDLGAA PLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP EINALATLILGVVGIVGFIAWYLMARAEKQRVRDIQRARQG >gi|289776635|gb|GG745509.1| GENE 692 747149 - 747622 520 157 aa, chain + ## HITS:1 COG:no KEGG:CKO_02248 NR:ns ## KEGG: CKO_02248 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 157 6 162 162 244 82.0 6e-64 MGLFTKTRSSHARLNVPALVQVAAFAIILIRALDLLMILNLLGLQGLNEFIHRSVQTWNL TLVFLGSLALVFVEIWCAFSLVKGRNWARWVYLLTQIIAAGYLWAASLGYGYPELFSIPG ESKREIFHSLVMQKLPDLLVLTLLFVPANCRRFFRLQ >gi|289776635|gb|GG745509.1| GENE 693 747664 - 748791 1379 375 aa, chain + ## HITS:1 COG:ECs0939 KEGG:ns NR:ns ## COG: ECs0939 COG2265 # Protein_GI_number: 15830193 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 373 1 374 375 623 81.0 1e-178 MHCALYDAGRCRSCQWLERPVPQQLADKMADLRTLLAAIPVAAWGEPVSGPETAFRNKAK MVVSGSVERPLLGMLHRDGTPVDLTDCPLYPSSFAPVFAVLKPFIARAGLTPYNVARKRG ELKYLLLTASQQGEMMLRFVLRSEAKLAQLRAALPWLQAQLPQLKVITANIQPVHMAIME GKQEIFFTEQQALGEVFNEVPLWIRPQSFFQTNPAVASRLYATARDWVRALPVQHMWDLF CGVGGFGLHCATPAMRLTGIEIAPEAIACARQSAAQLGLSNLHFQALDSTQFATHEDDIP QLVLVNPPRRGIGAELCDYLSRMAPPYIIYSSCNARTMATDIARLRGYRVERVQLFDMFP HTAHYEVLTLLVREV >gi|289776635|gb|GG745509.1| GENE 694 748870 - 749586 1006 238 aa, chain + ## HITS:1 COG:TM1655 KEGG:ns NR:ns ## COG: TM1655 COG0745 # Protein_GI_number: 15644403 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Thermotoga maritima # 3 235 12 246 247 215 48.0 5e-56 MAKTILLVEDDDDIATLLRLNLQDEGYQIVHEADGDQALVQLEKQVWDAVILDLMLPGVD GLEICRRIRQMTRYLPVIIISARTSEMHRVLGLEMGADDYLAKPFSLLELIARVKALFRR QEAMGQNLLMDAGRLSCHGLSIDPLSREVKLRGEVVDLTPREFDLLYYFARHPGEVFSRL ALLEQVWGYQHEGYEHTVNTHINRLRSKIERDPAEPDIILTVWGKGYKFAPMSQEVAP >gi|289776635|gb|GG745509.1| GENE 695 749583 - 751055 1566 490 aa, chain + ## HITS:1 COG:lin2727 KEGG:ns NR:ns ## COG: lin2727 COG0642 # Protein_GI_number: 16801788 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 180 489 168 457 459 125 29.0 3e-28 MIRRLSLSQRLALVVVSLLMLCAAAVCAVQLHSSAQYGNAMVQRLSAGLAQQIVAREPLL DAHGGVNRQTLKSLFDRLMTFNPSVELYLLSPDGDLLADAAPPGHIQRQRIDMAPVQAFL TGSASPVYGDDPRSLDGRKVFSAAPLRVDGQLRGYLYIILQGETFNQLAADAWQKTLWSI VLWTLLLVALFGLLTGGLAWFWVTRPVRQLTAQVAASGQDSISAIKTLAARAPEPLPGNE VAVLENRFIDLAQQIAGQWDRLADSDRQRREFVANISHDLRTPLTSLLGYLETLTLKDER LSAEERKQYLTIALRQGNKVRHLSQQLFELARLEHGSIKPQRERFAMGELISDVAQKFEL TARTREVNLRIDVPGPLPLINADVSMIERVVTNLLDNAMRHTPVGGEIRLAVWQEDQQLQ VEVADNGTGVDAALRDDLFQRPSALSTQASREDRGGLGLLIVKRMLELHGGGIRLLESVS GARFRFFVPL >gi|289776635|gb|GG745509.1| GENE 696 751139 - 751870 1173 243 aa, chain - ## HITS:1 COG:artJ KEGG:ns NR:ns ## COG: artJ COG0834 # Protein_GI_number: 16128828 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 434 88.0 1e-122 MKKLVLAALLTTFTFGAAAAEKISFGVSATYPPFESMDANNQIVGFDLDLAKALCKQMQA ECTFTNHAFDSLIPALKFKKYDAVISGMDITPERSKQVAFTDPYYANSALVIAKKDAFHS FDDLKGKRIGMENGTTHQKYLQDKHPEVKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNE WLKTNPQLGAATPKVTDPQYFGTGLGIAVRPDNKALLEKLNAALKAIKADGTYQKISNQW FPE >gi|289776635|gb|GG745509.1| GENE 697 752055 - 752723 1123 222 aa, chain - ## HITS:1 COG:ECs0944 KEGG:ns NR:ns ## COG: ECs0944 COG4160 # Protein_GI_number: 15830198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 359 91.0 2e-99 MLDYLPELLKGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLVWIVRGYITLFTGTPL LVQIFLIYYGPGQFPSLQDYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAIPDG QWQSCSALGMSKKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQLL YGRTYDVMVFGAAGIIYLIVNGLLTLLMRLVERKALAFERRN >gi|289776635|gb|GG745509.1| GENE 698 752723 - 753439 871 238 aa, chain - ## HITS:1 COG:STM0889 KEGG:ns NR:ns ## COG: STM0889 COG4215 # Protein_GI_number: 16764250 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 237 1 237 238 400 91.0 1e-111 MNEIFPLASAAGMTVGLAVCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEI LVVLFIYFGSSQLLLTLSDGFTIPLGFTQIPVQMQIENFDVSPFLCGAIALSLLYAAYAS QTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERRPG >gi|289776635|gb|GG745509.1| GENE 699 753446 - 754177 1145 243 aa, chain - ## HITS:1 COG:STM0890 KEGG:ns NR:ns ## COG: STM0890 COG0834 # Protein_GI_number: 16764251 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 243 1 243 243 447 92.0 1e-126 MKKVLIAALLAGMSLSASAAQTIRFATEASYPPFELVDANNQIVGFDVDLANALCKEIDA TCTFTNQAFDSLIPGLKFRRFDAVMAGMDITPEREKQVLFSTPYYDNSALFVGQQGKFTS IDQLKGKKVGVQNGTTHQKFITDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTE WLKSNPKLAAVGDKVTDKAYFGTGLGIAVRQGNTDLQQKFNAALEKVKKDGTYQTIYNKW FQK >gi|289776635|gb|GG745509.1| GENE 700 754198 - 754992 498 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 25 263 2 240 245 196 42 2e-48 MHNYSAKGSICGLNSYSYQTAQMSIKLNGINCFYGAHQALFDITLDCPQGETLVLLGPSG AGKSSLLRVLNLLEMPRSGSLSIAGNQFDFTKAPSDKAIRELRQNVGMVFQQYNLWPHLT VQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMM EPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGH IVEQGDASCFTHPQTDAFKNYLSH >gi|289776635|gb|GG745509.1| GENE 701 755153 - 755668 667 171 aa, chain - ## HITS:1 COG:no KEGG:KPK_3665 NR:ns ## KEGG: KPK_3665 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 171 1 171 171 320 99.0 1e-86 MRYKLLAVLLPCALALSACTTVTPAYKDNGTRSGPCVEGGPDDVAQKFYDTQIQNRTQDP AALRPYLSDGLAQLLNDARQDPANSKLLQTNPFSSSSTPVDSAVVASASTIPNRDARNIP LRVELKQGTQSWKDEVLMIQEGQCWAVDDVRYLGNNSHAPAGTLRQSLEKR >gi|289776635|gb|GG745509.1| GENE 702 755923 - 756195 373 90 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3478 NR:ns ## KEGG: Kvar_3478 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 90 1 90 90 139 100.0 4e-32 MKYAALVAGAALFLTANAFSAEILTKEAFNKVHTQYTKIGTISSTGQTAPSDAREELIKK ADEKGADVIVLSSGNTDKKLHVSANIYKKK >gi|289776635|gb|GG745509.1| GENE 703 756557 - 757696 1014 379 aa, chain + ## HITS:1 COG:sll1673_3 KEGG:ns NR:ns ## COG: sll1673_3 COG2199 # Protein_GI_number: 16329397 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 215 376 6 173 176 159 48.0 8e-39 MLTNKREQARQQRAALWATKDNVQRHALSMSMPWLAFVNIAFALMIFFRNFIFTYFDKKL LTHRAVIPYIEVALIAVIIISAILVIIAVTPRLAQGRYTLNIITGLLLALSLCWSLSNYC FIFFWTLPFAWPLLVILMTTGLTALYHHWPGIIAFMLPMWVTALLAGVQIHYDGEFRFLT LWAIFTAILLYGRRILQRWYDEAWDTHQENMQLIQRLESIANRDALTGTANRRALNAFLA QLWEQKAPLALIMIDVDYFKRYNDHYGHQAGDDCLSSVAQVLKMAVRAEDDLVARYGGEE FVVALPGVSLAHATVIAERIQQKIHDAALPHEASAVAAVVTVSMGVVASDGTVPMETLIA RADSALYQAKNKGRNQWSY >gi|289776635|gb|GG745509.1| GENE 704 757728 - 758558 1182 276 aa, chain + ## HITS:1 COG:ECs0953 KEGG:ns NR:ns ## COG: ECs0953 COG3023 # Protein_GI_number: 15830207 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 275 1 275 276 424 76.0 1e-118 MKRIAQVALLALLLTGCAGEKGIIDRDGYQLDTRHPAQAAYPRIKVLVIHYTADNFDVSL ATLTDKEVSSHYLIPEQPPRYQHKPRIWQLVPEEDLAWHAGVSYWRGSTRINDTSIGIEL ENRGWQKTAGVKSFTPFHPEQIAALIPLARDIITRYHIAPQNVVAHADIAPQRKDDPGPL FPWQQLAQQGIGAWPDEQRVAFYLNGRPASDPVDPEVVLDLLARYGYQVTPEMTPAQKKR VIIAFQMHFRPQRWDGVADAQTEAIAEALLEKYGQG >gi|289776635|gb|GG745509.1| GENE 705 758555 - 759568 1094 337 aa, chain - ## HITS:1 COG:STM0932 KEGG:ns NR:ns ## COG: STM0932 COG0451 # Protein_GI_number: 16764294 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 1 337 1 337 337 640 90.0 0 MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQA KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFD YHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPHTRFTILRPQSLFGPHDKVFI PRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQSACDHLPSARAWNISNGEPR TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFT LDITRAQDELGYQPVVTLDDGIVRTAAWLRDHGKLHR >gi|289776635|gb|GG745509.1| GENE 706 759656 - 761098 1262 480 aa, chain - ## HITS:1 COG:ECs0955 KEGG:ns NR:ns ## COG: ECs0955 COG0702 # Protein_GI_number: 15830209 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 473 1 473 476 774 80.0 0 MSQSVLVLGASGYIGQHLVRELSARGYPVLAAARHIDRLQKLDLPGVTCRSVDLNQPQAL PALLAGIDTLYYLVHGMGEGGDFIAHERRVATHVRDALRQSSVRQVIFLSSLQAPAQEQS DHLRARQVTGEVLRESGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT PVALENLLFDLVELLNHPSNAHRVFEAAGPEVLSYQQQFIQFMAVSGKHRPLIPIPLPTR WISVWFLNVITSVPPTIARALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQ LVNSSDWGYDAQAFARWRPEYGYFPKQAGCTVTTQASRQALWQVVNQIGGKEGYFFGNLL WKTRGAMDLLVGHRLAKGRPQRDYLQTGDTVDSWKVIIVEEEKQLTLLFGMKAPGLGRLS FTINDKGDHRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRDQG >gi|289776635|gb|GG745509.1| GENE 707 761109 - 762110 1166 333 aa, chain - ## HITS:1 COG:ybjU KEGG:ns NR:ns ## COG: ybjU COG2008 # Protein_GI_number: 16128838 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Escherichia coli K12 # 1 333 1 333 333 582 84.0 1e-166 MIDLRSDTVTRPGRAMLEAMMAAPVGDDVYGDDPTVNELQRYAADLAGKEAALFLPTGTQ ANLVGLLSHCQRGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDATADGSLPLDKVAAKI KPDDIHFAPTRLLSLENTHNGKVLPRDYLQEAWAFTRQRDLALHVDGARIFNAVVAYGCE LRDIAQYCDSFTICLSKGLGAPVGSLLLGSEAYIRRAIRWRKMVGGGMRQAGILAAAGLY ALKNNVQRLQEDHDNAAWMAEQLRAIGADVTRHDTNMLFVRVGEAQAPALGEFMQARGVL INASPVVRLVTHLDVNRQQLSEVVAHWQAFLQR >gi|289776635|gb|GG745509.1| GENE 708 762149 - 763867 2151 572 aa, chain - ## HITS:1 COG:ECs0957 KEGG:ns NR:ns ## COG: ECs0957 COG0028 # Protein_GI_number: 15830211 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1090 93.0 0 MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNRMGTIDWMPTRHEEVAAFAAGAE AQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELVSTPEQIPQVLAIAMRKAVINRGVSVVVLPGDVALKAAPESASSHWYHAP LPTVTPAEEELRKLAQLIRYSSNIALMCGSGCAGAHQELVEFAAKIKAPIVHALRGKEHV EYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPGSIGA HSKVDMALVGDIKSTLKALLPLLEEKTDRHFLDKALEHYRDARKGLDDLAKPSDKAIHPQ YLAQQISHFADEDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQAIGAQA TAPERQVVAMCGDGGFSMLMGDFLSLAQMKLPVKIVIFNNSVLGFVAMEMKAGGYLTDGT ELHDTNFARIAEACGIKGIRVEKASEVDEALQTAFRTDGPVLVDVVVAKEELAIPPQIKL EQAKGFSLYMLRAIISGRGDEVIELAKTNWLR >gi|289776635|gb|GG745509.1| GENE 709 764019 - 764453 560 144 aa, chain + ## HITS:1 COG:no KEGG:KP1_1871 NR:ns ## KEGG: KP1_1871 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 144 25 168 168 215 92.0 4e-55 MVKGMLNVVNKTLSHDDAGKLLLRLAVGGLMLFHGLHKLLDGVGGISGMLVAKGLPGFIA YGVLVGEVVAPCLLILGVLTRPAALVLAFTMVVAWLMVGLGKTFALDAVGAWAIENLVYF FVGALAIALLGAGRYSLAGQSAWR >gi|289776635|gb|GG745509.1| GENE 710 764661 - 765629 1246 322 aa, chain - ## HITS:1 COG:ybjV KEGG:ns NR:ns ## COG: ybjV COG1018 # Protein_GI_number: 16128840 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 322 1 322 322 593 88.0 1e-169 MTMPTSQCPWRMQVHHIHQETPDVWTLSLLCHDYYPYRAGQYALVSVCHSAETLRAYTLS STPGVSEYITLTVRRIDEGAGSQWLTREVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CGVTPIMSMRRWLAKYRPQADVQVIYCVRSPEDVIFAEEWRQYPVTLVAEHHATHGFVAG RLTRELLQSVPDLASRTVMTCGPAPYMEKVEQDVAALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAREFYAPVGTTLLDALESNKVPVTVACRAGVCGCCKTKVVSGKYSVTSTMTLTD AEIADGYVLACSCHPQSDLVLA >gi|289776635|gb|GG745509.1| GENE 711 765640 - 767292 2341 550 aa, chain - ## HITS:1 COG:STM0937 KEGG:ns NR:ns ## COG: STM0937 COG1151 # Protein_GI_number: 16764299 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Salmonella typhimurium LT2 # 1 550 1 550 550 1113 94.0 0 MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIASLQGLSAWALKAREYGIIDH EVDSFAPRAFFSTLTNVNFDSPRIVGYARQAIALREALKAQCQNLDASAAVDNPVADLHL VSDDLGDLQRQAADYAPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNAIY AQYHKIMAWLGTWPADMNALLECSMEIGQMNFQVMSILDAGETTKYGHPTPTQVNVKATE GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQ QVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVNHLEGEDFAPVITQAQQMA GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLVGGCDGARGERNYFTDFAT SVPDDCLILTLACGKYRFNKLDFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFFTPDLLAILNEKFGLRSVTTV EQDMQQLLSA >gi|289776635|gb|GG745509.1| GENE 712 767436 - 768335 747 299 aa, chain - ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 299 17 315 315 418 82.0 1e-117 MLSGLFIILLPLVVGYLVPLRQPSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLA ILHYAAVSVVIILLCNIAALLWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFL LGLTGLSFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQIVLNRRGMIVAMVVMASSLL GGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA >gi|289776635|gb|GG745509.1| GENE 713 768451 - 769146 1000 231 aa, chain - ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 1 231 1 231 231 339 90.0 3e-93 MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFAGVALAFGLTVLTMAFAVGHISGG HFNPAVTLGLWAGGRFPAKEVIGYIIAQVVGGIIAAAVLYVVASGKAGFDAAASGFASNG YGEHSPGGFSMLSAIVIEIVLTCGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPV TNTSVNPARSTAVAIFQGGWALQQLWLFWVMPIVGGILGGVLYRTLLEKRD >gi|289776635|gb|GG745509.1| GENE 714 769566 - 771224 1398 552 aa, chain + ## HITS:1 COG:ybjD KEGG:ns NR:ns ## COG: ybjD COG3593 # Protein_GI_number: 16128844 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Escherichia coli K12 # 1 552 1 552 552 952 86.0 0 MLLERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPEFDLYHFVRDDF WFPPGDIQGREHHLHIILTFRETEPGRHRVRRFRPLQRCWVPCDDGYHRVFYRLEGELAD DDSVMTLRSFIDGEGEALAVEDIDDLARHLVRLMPVLRLRDARFMRRIHNGTVPHSPQIE ITARQLDFLSRELVSHPQNLSDGQIREGLSAMVQLLEHYFAEQSSAQTRHRLMRRRSHDE QRSWRYLDIINRMIDKPGGRSHRVILLGLFSTLLQAKGTVRLDRDARPLLLIEDPETRLH PIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEQVCRLVRESSRVSAWRLGPGGMNAED SRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGVKVIEFAQSGLK PLIKFARRMGIQWHVLVDGDEAGKKYAATVLGLLNNDRELERDHLTSLPAMDMEHFMYRQ GFDDVYHRVAQIPDNVPMNMRRVITKAIHRSSKPDLAIEVAMEAGRRGVDAVPTLLKKMF SRVLWLARGRAD >gi|289776635|gb|GG745509.1| GENE 715 771362 - 772477 1398 371 aa, chain + ## HITS:1 COG:ECs0964 KEGG:ns NR:ns ## COG: ECs0964 COG0845 # Protein_GI_number: 15830218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 14 371 24 380 380 537 83.0 1e-152 MKVKGKRRTIWWLLAIVVLGLAVWGWRILNAPLPNYQTLVVRKGDLQQSVLATGKLDALR KVDVGAQVSGQLKTLHVNIGDKVKKDQLLGVIDPEQAQNQIKEVEATLMELRAQLNQARA ESKLAQVTLARQQQLAQRQLVSRQDLDTAATDLAVKQAQIGTIEAQIKRNQATLDTAKTN LDYTRILAPMAGEVTQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVIHLRPG QKAWFTVLGDPLTRYEGTLKDILPTPEKVNDAIFYYARFEVPNPQGILRLDMTAQVHIQL AEVKNVITIPLSALGDAVGDNRYHVRLLRTGEVKEREVAIGARNDTDVAVVQGLDEGDEV IVGESASGAAK >gi|289776635|gb|GG745509.1| GENE 716 772474 - 774414 359 646 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 253 646 6 413 413 142 25 3e-32 MTALLELRDIRRSYPSGDGSVEVLKGITLSINAGEMVAIVGASGSGKSTLMNILGCLDKP TSGTYRVAGTDIAQLNGDALARLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGSERRA RLARAHDLLVRLGLGDRADYQPSQLSGGQQQRVSIARALMNGGEVILADEPTGALDSHSG EEVMAILHQLKAQGHTVIIVTHDPQVAAQAERIIEIRDGEIVRNPPGSRQGGGLRARQQP EPSAWRQFTSGFREALVMAWRAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLA DIRAIGTNTIDVYPGKDFGDDDPRYQQALKYDDLLAIQKQPWVRSATPAVSKSLRLRANN IDVAASAEGVGPQYFNVYGMTFSEGNTFNELQLNSRAQVVVLDSNTRRQLFPNKAKVVGE VILVGNMPATVIGVADEKQSMFGSSKILRVWLPYTTMAGRVMGQSWLNSITVRVHEGYDS ETAEKQLLRLLELRHGKKDVFTWNMDSILKTAERTTHTLQLFLTLVAVIALVVGGIGVMN IMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGVTLSLMIAFILQLFL PGWEIGFSPLALLTAFLCSTLTGVLFGWLPARNAARLDPVDALARE >gi|289776635|gb|GG745509.1| GENE 717 774481 - 774702 201 73 aa, chain - ## HITS:1 COG:STM0943 KEGG:ns NR:ns ## COG: STM0943 COG1278 # Protein_GI_number: 16764305 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Salmonella typhimurium LT2 # 1 73 1 73 73 139 93.0 1e-33 MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQAVRFDVHQGPKGNH ASVIVPVEAETAA >gi|289776635|gb|GG745509.1| GENE 718 775028 - 775345 275 105 aa, chain + ## HITS:1 COG:STM0944 KEGG:ns NR:ns ## COG: STM0944 COG2127 # Protein_GI_number: 16764306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 5 105 6 106 106 188 92.0 2e-48 MSKRDWLDFEHLVDDEVRDAIKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQL MLTVHYEGKAICGVFTAEVAETKVAMVNQYARENEHPLLCTLEKA >gi|289776635|gb|GG745509.1| GENE 719 775376 - 777655 1368 759 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 740 14 806 815 531 38 1e-149 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA FIEQTTPVLPATEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQA AYLLRKHEVSRLDVVNFISHGTRKDEPSQSSDNSGSQPGNEEQAGGEERMENFTTNLNQL ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIIN GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA GLGHEHKPVGSFLFAGPTGVGKTEVTVQLAKALGIELLRFDMSEYMERHTVSRLIGAPPG YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNV VLVMTTNAGVRETERKSIGLIQQDNSPDAMDEIKKIFTPEFRNRLDNIIWFDHLSTTVIH QVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMGRVIQDNLKKPLANE LLFGSLVDGGQVTVSLDSAKNALTYDFQSAQKHKPEAAH >gi|289776635|gb|GG745509.1| GENE 720 777773 - 777991 257 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 103 65 2e-20 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|289776635|gb|GG745509.1| GENE 721 777887 - 778159 73 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSYHVTVFQFYAEHSVRQRFKYGALHFNIVFFGHLVLWGITTVVLNRQDNAEVHHVSKV LRIYPESFALPQGAQSAHRQRIYDGYESPK >gi|289776635|gb|GG745509.1| GENE 722 778343 - 779065 740 240 aa, chain - ## HITS:1 COG:aat KEGG:ns NR:ns ## COG: aat COG2360 # Protein_GI_number: 16128852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Escherichia coli K12 # 7 236 1 230 234 416 84.0 1e-116 MRIEVKMRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGD PILWWSPDPRAVLWPEQFHLSRSMKRFHQRSPYRVTLNHAFGEVIEGCASDRDEGTWITS SIVRAYHQLHELGHAHSIEVWQENTLVGGMYGVAQGALFCGESMFSRAENASKTALLVFC QAFTQSGGKLIDCQVLNNHTASLGAVDIPRRDYLDYLSVLRGYRLPELFWVPRVLFPGAQ >gi|289776635|gb|GG745509.1| GENE 723 779087 - 780808 230 573 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 330 563 121 355 398 93 28 2e-17 MRALLPYLALYKRHKWMLLLGVMLAIVTLLASIGLLTLSGWFLSASAVVGVAGIYSFNYM LPAAGVRGAAIIRTAGRYFERLVSHDATFRVLQHLRVFTFSKLLPLSPAGLARFRQGELL NRVVADVDTLDHLYLRVISPLVGALVVIVVVTCGLSLLDVTLALTLGGIMLVTLLVMPPL FYRAGKPAGESMTQLRGQYRQQLTAWLQGQAELMVFNASDRYRAQMEKTELSWQDAQRRQ AELTALSQAVMLLIGGIAVVAMLWLASAGIGDNSQPGALIALFVFCALAAFEALAPVTGA FQHLGQVIASARRISQITDQQPEITFVEGEASVPAQVALTFRQVTFRYPHQPSPALENIS LQIAAGEHIAILGRTGCGKSTLLQLLTRAWDPTQGEILLNDQPLSQLSEATLRQTMSVVP QRVHLFSATLRDNLLLAAPDADDTALCATLEKVGLEKLLEDGGLNSWLGEGGRQLSGGEL RRLAIARALLHDAPLMLLDEPTEGLDAATESQILHLLAEVMREKTVLMVTHRLRGLARFN QIIVMDNGQIIEQGSHADLLAKQGRYFQFKQRL >gi|289776635|gb|GG745509.1| GENE 724 780809 - 782575 1973 588 aa, chain - ## HITS:1 COG:ECs0972 KEGG:ns NR:ns ## COG: ECs0972 COG4988 # Protein_GI_number: 15830226 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 887 80.0 0 MNKTRQQELTRWLKQQSIISRRWLMISRLLGVASGLLIVAQAWFLARILHRMVMENIPAT ALLLPLTLLVLVFVLRAWVVWLRERVGFQAGQHIRYEIRRQVLDRLQQAGPAWIQGKPAG SWATLILEQIDDMHDYYARYLPQMTLAACVPLLIVITIFPINWAAALILLGTAPLIPLFM ALVGMGAADANRRNFQALARLSGHFLDRLRGMETLRIFHRGQAEIDNIRDASQDFRQRTM EVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELNFGHYGAGVTLMAGFLTLILAPEF FQPLRDLGTFYHAKAQAVGAADSLKTFMETPLTQLERGEKTLNDNDLIGVEARDLVIKSP EGKVLAGPLNFSLPAGARVVLVGQSGSGKSSLLNTLLGFLPYEGSLKVNGAELRELDADR WRRLLSWVGQNPQLPAATLRENVLLAWPEASDAQLRLALDKAWVSEFIALLPDGIHTAVG DQAGRLSVGQAQRIAVARALLVPCRLLLLDEPAASLDAHSEQRVMQALTHASTEQTTLLV THQLEGLADWDAVWVMQDGQIIEQGDYATLARAGGVFSALLAHRQEEI >gi|289776635|gb|GG745509.1| GENE 725 782690 - 783685 717 331 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 19 326 5 306 306 280 48 8e-74 MYANYYGDLMGTAKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVE NWPGDPNDLTGPLLMERMHEHAAKFETEIIFDHISRVDLQNRPFRLTGDSGEYTCDALII ATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASE VHLIHRRDAFRAEKILIKRLMDKVASGNIVLHTDRTLEEVTGDQMGVSGLRLRDTKNSDN VESLEVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDH IYRQAITSAGTGCMAALDAERYLDGLADACK >gi|289776635|gb|GG745509.1| GENE 726 784191 - 784685 535 164 aa, chain + ## HITS:1 COG:STM0959 KEGG:ns NR:ns ## COG: STM0959 COG1522 # Protein_GI_number: 16764320 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 164 1 164 164 313 100.0 1e-85 MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|289776635|gb|GG745509.1| GENE 727 784821 - 786080 1093 419 aa, chain + ## HITS:1 COG:ftsK KEGG:ns NR:ns ## COG: ftsK COG1674 # Protein_GI_number: 16128857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli K12 # 1 411 1 390 1329 512 71.0 1e-145 MSQEYTEDKEVKLTKLSSGRRLLEAMLILCSLFAIWLMAALLSFNPSDPSWSQTAWHEPI HNLGGAPGAWLADTLFFIFGVMAYTIPVIIIGGCWFAWRHQENDEYIDYFAVSLRLIGAL ALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCIWAAGLTLFTG WSWVSIAEKLGGGILSVLTFASNRTRRDDTWVDEGEYEDDDEEYDDEEAATPQESRRARI LRSALARRKRLAEKFTNPMGRKTDAALFSGKRMDDGEEAVQYSASGAPVAADDVLFSGAS AARPTEDDVLFSGASAARPGDFDPYDPLLNGHSIAEPVGAAAAATAAPQAWAESAAGHQG AAPAYQPEAGYPPQAYQPEPAPYQQPVYDPHAGQPAPQAYQPEPAPYQQPAYASHALAS >gi|289776635|gb|GG745509.1| GENE 728 786660 - 789200 2573 846 aa, chain + ## HITS:1 COG:ftsK KEGG:ns NR:ns ## COG: ftsK COG1674 # Protein_GI_number: 16128857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli K12 # 334 846 817 1329 1329 900 96.0 0 MPSPEPEPEVAPEEVKRPPLYYFEEVEEKRARERELLASWYQPIPEPESPIATKPLTPLA SSSKPPVETTVVSAVAAGVHQATAASGGAAAATSATAASAAAAPLFSPASSGPRVQVKEG IGPKLPRPNRVRVPTRRELASYGIKLPSQREAEQRARQAERDPHYDDELLSDEEADAMEQ DELARQFAATQQQRYGHRWEDDNATDDDDADTAAEAELARQFAATQQQRYSAEQPPGANP FSPADYEFSPMKTLVNEGPSEPLFTPTPEVQPQQPAPHYQQPAAAPQQGYQPAQHQPVHP QPVPPQPYQTAPQPVQQQQPVVPQGQPAAPAPQESLIHPLLMRNGDSRPLQRPTTPLPSL DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKA ARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSP LTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMID PKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLMSALGVRNLAGYNEKIA EAARMGRPIPDPYWKPGDSMDAVHPVLEKLPYIVVLVDEFADLMMTVGKKVEELIARLAQ KARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAESLLGMGD MLYSGPNSTTPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGGGGFDGGE ELDPLFDQAVSFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVL APPPFE >gi|289776635|gb|GG745509.1| GENE 729 789323 - 789934 736 203 aa, chain + ## HITS:1 COG:ECs0976 KEGG:ns NR:ns ## COG: ECs0976 COG2834 # Protein_GI_number: 15830230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Escherichia coli O157:H7 # 1 203 2 204 204 358 93.0 4e-99 MKKLAITCALLSGMVVSQVWADAASDLKSRLDKVSSFHASFTQKVTDGSGNAVQDGQGDL WVKRPNLFNWHMTQPDESVLVSDGKTLWFYNPFVEQATATWLKDATSNTPFMLIARNQSS DWQQYNIKQNGDDFVLTPKSGSGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQN GAVDASKFTFTPPKGVTVDDQRK >gi|289776635|gb|GG745509.1| GENE 730 789943 - 791286 1401 447 aa, chain + ## HITS:1 COG:STM0962 KEGG:ns NR:ns ## COG: STM0962 COG2256 # Protein_GI_number: 16764323 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Salmonella typhimurium LT2 # 1 447 1 447 447 835 95.0 0 MSNLSLDFSDNAFQPLAARMRPENLAQYIGQQHLLAPGKPLQRAIEAGHLHSMILWGPPG TGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIERVLDQAMND KSRGYGGQDIILPDETRKAIAELVNGDARRALNTLEMMADMAESDDSGKRVLKAELLTEI AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS EDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALSDA RDRPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEQYFPQEMAQTRYYHPTN RGLEGKIGEKLAWLAEQDQNSPIKRYR >gi|289776635|gb|GG745509.1| GENE 731 791378 - 792670 1703 430 aa, chain + ## HITS:1 COG:STM0963 KEGG:ns NR:ns ## COG: STM0963 COG0172 # Protein_GI_number: 16764324 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 430 1 430 430 827 94.0 0 MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ AKARGEDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDENDN VEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQFM LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED SMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISSCS NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEILR PYMRGLEYIG >gi|289776635|gb|GG745509.1| GENE 732 792871 - 795309 2629 812 aa, chain + ## HITS:1 COG:STM0964 KEGG:ns NR:ns ## COG: STM0964 COG0243 # Protein_GI_number: 16764325 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 811 1 813 814 1554 91.0 0 MKIKAPDALLAAEVSRRGLMKTTAIGGLALASNALTLPFTRLAHAADTPAPANEKVVWSA CTVNCGSRCPLRMHVVDGAIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKY PMKRVGKRGEGKFEQISWEEAFDTIASNMQRLIKEYGNESIYLNYGTGTLGGTLTRSWPP GKTLIARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSQLVVLFGNNP GETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVSGLAW VMITENLVDQPFLDKYCVGYDEKTLPAGAPANGHYKAYILGQGTDGIAKTPEWASTITGI PRERIVKLAREIATAKPAYISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGARE GSYSLPFERMPTLENPVQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYA GNCLINQHSEINRTHEILQDDKKCEMIVVIDCHMTSSAKYADILLPDCTASEQMDFALDA SCGNMSYIIFADQAIKPRFECKTIYEMTTELAKRLGVEQQFTEGRTQEGWMRHLYEQSQK AIPDLPDFDTFRQQGIYKQRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALAKIAA TWELPEGDVIDPLPIYTPGFENYNDPLTAKYPLQLTGFHYKSRVHSTYGNVDVLKAACRQ EMWINPIDAKQRGIANGDRIRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYNPDASRVD QAGSINVLTTQRPSPLAKGNPSHTNLVQVEKL >gi|289776635|gb|GG745509.1| GENE 733 795320 - 795937 645 205 aa, chain + ## HITS:1 COG:STM0965 KEGG:ns NR:ns ## COG: STM0965 COG0437 # Protein_GI_number: 16764326 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 205 1 205 205 384 91.0 1e-107 MTTQYGFFIDSARCTGCKTCELACKDYKNLTPEVSFRRIYEYAGGDWQEDNGVWNQNVFA YYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNADK GHMTKCDGCHERVAEGKKPICVESCPLRALDFGPIAELRAKHGQLAAVAPLPSAHFTRPS IVIKPNANARPCGDTTGYLANPKEV >gi|289776635|gb|GG745509.1| GENE 734 795939 - 796808 950 289 aa, chain + ## HITS:1 COG:STM0966 KEGG:ns NR:ns ## COG: STM0966 COG3302 # Protein_GI_number: 16764327 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Salmonella typhimurium LT2 # 1 289 1 287 287 377 80.0 1e-104 MGNGWHEWPLMIFTVFGQCVAGGFIVMALALMTGNLSREQEQRVVGSMFGLWVLMGIGFI ASTMHLGSPLRAFNSLNRVGASSLSNEIASGAIFFAVGGIGWLLAVCKKLPAGLRSLWLI VTMVLGVIFVWMMVRVYNTIDTVPTWYTVWTPLSFFLTLFIGGPLLGYLLLRVAGVDGWA LRLLPVVTLLALLASIVVVLMQGSELATIHSSIQQASALVPDYGLLMAWRMVLLALALAL ACWCVPQIRGRKPAVSLLSLAFVLVLAGEMIGRGVFYGLHMTVGMAIAS >gi|289776635|gb|GG745509.1| GENE 735 797084 - 798232 1499 382 aa, chain + ## HITS:1 COG:ECs0983 KEGG:ns NR:ns ## COG: ECs0983 COG0477 # Protein_GI_number: 15830237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 381 1 381 382 553 82.0 1e-157 MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLAGTLL AGWVIKRLGFNRSYYLASLIFAVGCVGLGITVGFWTWLSWRFIAGVGCAMIWVVVESALV CSGTSRSRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSVLPWVTGLALAAILPLLFTRI MGQAEEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDAGIGFW MAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCMAMLSQAAMAPALFVLGASGF TLYPVAMAWACEKVEHHQLVAMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASV SFIYLLTLLRKAGHHPTPVAHA >gi|289776635|gb|GG745509.1| GENE 736 798398 - 799138 1061 246 aa, chain - ## HITS:1 COG:STM0970 KEGG:ns NR:ns ## COG: STM0970 COG1180 # Protein_GI_number: 16764330 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Salmonella typhimurium LT2 # 3 246 31 274 274 512 97.0 1e-145 MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEITVEELMKEV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDEL LEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAQYLAKKNINVWIRYVVVPGWSDDDDS AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVHPPKKETMERVKGILEQY GHKVMY >gi|289776635|gb|GG745509.1| GENE 737 799330 - 801612 2663 760 aa, chain - ## HITS:1 COG:STM0973 KEGG:ns NR:ns ## COG: STM0973 COG1882 # Protein_GI_number: 16764333 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Salmonella typhimurium LT2 # 1 760 1 760 760 1506 95.0 0 MSELNEKLATAWEGFAKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTKLWDTVME GVKQENRTHAPVDFDTALASTITSHDAGYIEKGLEKIVGLQTEAPLKRAIIPFGGIKMVE GSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTKDILNCRKSGVLTGLPDAYGRGRIIG DYRRVALYGIDFLMKDKYAQFQSLQEKLESGEDLEATIRLREEISEQHRALGQIKEMAAK YGYDISGPATTAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSSFLDIYIERDLQAGKITEQ DAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGVDGRTLVTKNSFRFLNT LYTMGPSPEPNITILWSEKLPLSFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC VSPMVVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNFDEVMDRM DHFMDWLAKQYVTALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAI KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDARVDDMAVDLVERFMKKIQKLHTYRNAIP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQTM >gi|289776635|gb|GG745509.1| GENE 738 801664 - 802521 836 285 aa, chain - ## HITS:1 COG:ECs0987 KEGG:ns NR:ns ## COG: ECs0987 COG2116 # Protein_GI_number: 15830241 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 506 94.0 1e-143 MKADNPFDLLLPAAMAKVAEEAGVYKATKHPMKTFYLAITAGVFISIAFVFYITATTGTA AMPFGIAKLIGGVCFSLGLILCVICGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFG NLVGALLFVLLMWLSGEYMTANGGWGLNVLQTADHKLHHTFVEAVSLGILANLMVCLAVW MSYSGRSLMDKAMIMVLPVAMFVASGFEHSIANMFMIPMGIVIRNFASPEFWTAIGSTPE SFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGNDHH >gi|289776635|gb|GG745509.1| GENE 739 802907 - 804667 2382 586 aa, chain - ## HITS:1 COG:ECs0988 KEGG:ns NR:ns ## COG: ECs0988 COG1944 # Protein_GI_number: 15830242 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 586 4 589 589 1102 91.0 0 MTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIRDKECALCFTNG KGATKKAALASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWFPLTENDDVPEG LLDARLLAFYDPDDQLTASMLVDLQSGNDERGVCGLPFTRQSDGETVYIPMNIVGNLYVS NGMSAGNTPNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPGVVESIAKLEAE GFPIFAYDGSLGGKYPVICVVLFNPTNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFSGTTEEEFATLM AIFKAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGAHLRDTILSLPGS EWEKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKAMLALAGGDLEQ ALIWTEWTMEFNASVFSPERANYYRCLQTLLLLSQEEERQPLQYLNAFIRMYGADAVEAA SAALSGEAPFYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK >gi|289776635|gb|GG745509.1| GENE 740 804784 - 805476 775 230 aa, chain + ## HITS:1 COG:ECs0989 KEGG:ns NR:ns ## COG: ECs0989 COG2323 # Protein_GI_number: 15830243 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 363 75.0 1e-100 MKAFDWQRMALDKVPVEFLAEVALRSLYTFVLVFIFLKITGRRGVRQMSLFEVLIILTLG SAAGDVAFYDDVPLLPVLVVFITLALLYRGIMWLMGHSEKLEDLLEGKPIVVVEEGQLAW EKLHAENMTEFEFFMELRVNSVEQLGQVRLAILETNGQISVFYYPDEEVRAGLSILPTLC TARYTTIPQEGIYACVRCSIVMAMQAGEKRICSRCANAEWSKASRAKRLT >gi|289776635|gb|GG745509.1| GENE 741 805665 - 806753 1336 362 aa, chain + ## HITS:1 COG:STM0977 KEGG:ns NR:ns ## COG: STM0977 COG1932 # Protein_GI_number: 16764337 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Salmonella typhimurium LT2 # 1 362 1 362 362 687 88.0 0 MAQVYNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRSL LNIPSNYKVLFCHGGGRGQFAGIPLNILGDKNVADYVDAGYWAASAVKEAKKYCTPNVID AKITVDGKRAVTPMSEWQLTPGAAYLHYCPNETIDGIAIDDTPNFGDDVIVAADFSSTIL SREIDVNRFGVIYAGAQKNIGPAGLTLVIVREDLLGKASVACPSILDYTVLSENDSMFNT PPTFAWYLAGLVFKWLKQQGGVAAMDKINQQKAELLYGVIDNSGFYRNDVAQANRSRMNV PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLDGVKALTDFMLDFERR HG >gi|289776635|gb|GG745509.1| GENE 742 806827 - 808110 1617 427 aa, chain + ## HITS:1 COG:ECs0991 KEGG:ns NR:ns ## COG: ECs0991 COG0128 # Protein_GI_number: 15830245 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 759 89.0 0 MESLTLQPIARVEGTVNLPGSKSVSNRALLLAALARGTTVLTNLLDSDDVRHMLNALSAL GVQYTLSADRTRCEVTGNGGPLRAAAALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPR MKERPIGHLVDALRQGGAQIDYLEQENYPPLRLRGGFQGGNVEVDGSVSSQFLTALLMTA PLAPQDTVIAIKGDLVSKPYIDITLHLMKTFGVEVDNQSYQRFVVRGKQQYQSPGDYLVE GDASSASYFLAAGAIKGGTVKVTGIGRGSVQGDIRFADVLEKMGATVTWGDDFIACTRGE LKAIDMDMNHIPDAAMTIATAALFAQGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVE EGEDYIRITPPAKLKYAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL ARISTLA >gi|289776635|gb|GG745509.1| GENE 743 808285 - 808968 260 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 7 223 36 286 863 104 29 8e-21 MTANIPVITIDGPGGAGKGTLCKAMAEALGWHLLDSGAIYRVLALAALHHHVDVESEEAL VPLAAHLDVRFISTDGTLEVVLEGEDVSGEIRTQEVANAASKVAAFPRVREALLRRQRAF RELPGLIADGRDMGTVVFPDAPVKIFLDASADERAHRRMRQLQEKGFDVNFERLLSEIKE RDDRDRNRAVAPLVPAADALVLDSTELNIEQVIEKALQYAREKLAVA >gi|289776635|gb|GG745509.1| GENE 744 809102 - 810775 2801 557 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152969495|ref|YP_001334604.1| 30S ribosomal protein S1 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 557 1 557 557 1083 100 0.0 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKSNPWQQFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNYVALNKKGAIVVGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRVVSLSVRAKDEAEEKDAIATVNKQEDA NFSNNAMAEAFKAAKGE >gi|289776635|gb|GG745509.1| GENE 745 810927 - 811214 317 95 aa, chain + ## HITS:1 COG:STM0982 KEGG:ns NR:ns ## COG: STM0982 COG0776 # Protein_GI_number: 16764342 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 93 1 93 94 168 98.0 2e-42 MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYEE >gi|289776635|gb|GG745509.1| GENE 746 811420 - 813684 1805 754 aa, chain + ## HITS:1 COG:ycaI_1 KEGG:ns NR:ns ## COG: ycaI_1 COG0658 # Protein_GI_number: 16128880 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Escherichia coli K12 # 1 428 27 454 454 444 56.0 1e-124 MRLPWLAGCAIIAMLPLLWLPVLPGMGSLAGASALALALIRLRGRAVAGVAMTLLLMIWG VLSAHQALWPTRHLTGAIRQAEVILSETDGQALHRGQIVLLAGHYLFPPVGVTLYGELTP APACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDPRCSLRARY LASLTRRLEPYPWRAVMLGLGMGERLTLPTAIKVLMQNTGTSHLMAISGLHIALAASLIV LLLRGVQYILPGRWIGWRLPLLAGLAGAVCYAWLTGMQPPALRTCVGLGVCCALRLSGQR WTAWQVWLCCLGAILVTDPLAVLSQSLWLSAFAVAGLIFWFQWVPLPAGRWRWPWKALFA LVHLQAGVTLLLMPLQLLLFHGVSLTSMAANLLAVPLVTLLAVPLILGAMLLHLTGPGMV ESLLWLAADRVLALLFWALRRLPDGWLPLDARWLWISSLPWLLVMGWRFQSWRHFPALCL SVLFLLMRPFWRPFPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVII PWLRWHHLQLQGIVLSHEHLDHRGGLNSVLQAWPQAWVRSPLGWARHLPCHRGERWQWQG LNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWQHLTSTLIQ VPHHGSNTSSSELLVRRVEGAAALASASRYNAWRMPSYKVVQCYRQRGYRWFATPQQGQI TVVFSAEGWQIHSLRDQVLPRWYHQWFGAPADNG >gi|289776635|gb|GG745509.1| GENE 747 813721 - 815469 259 582 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 342 568 2 229 245 104 31 1e-20 MQNDKDLSTWQTFRRLWPIIAPFKAGLIVAAVALVLNAGSDTFMLSLLKPLLDDGFGKTD RSVLLWMPLVVIGLMVLRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQS TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVMMFYYSWQLSLILIVLAPIVSV AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLMFGGQEVETKRFDKVSNKMRLQ GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS LTNVNAQFQRGMAACQTLFAILDSEQEKDEGTRVIERAKGNLKFENVTFTYPGREVAALR NINLDIPEGKTVALVGRSGSGKSTIASLITRFYDVDDGQILLDGHDLREYKLSSLRDQVA LVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVM LSGGQRQRIAIARALLRNSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS TIEQADEIVVVEDGRIVERGTHHDLLEHKGVYAQLHKMQFGE >gi|289776635|gb|GG745509.1| GENE 748 815466 - 816446 856 326 aa, chain + ## HITS:1 COG:ECs0998 KEGG:ns NR:ns ## COG: ECs0998 COG1663 # Protein_GI_number: 15830252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli O157:H7 # 1 324 1 325 328 498 78.0 1e-141 MIARIWSGESPLWRLLLPLSWLYGLVSAVIRLSYQLGWQKAWRAPVPVVVVGNLTAGGNG KTPVVIWLVEQLQQRGIRVGVVSRGYGGKADRYPLVLTDRTSTAQAGDEPVLIHQRTGAP VAVSPLRSDAVKALLSAHDLQIIVTDDGLQHYKLARDREIVVIDGVRRFGNGWWLPAGPM RERASRLQSVDAVIVNGGVARPGEIPMQLRPGMAVNLLTGERRDVSTFTNVVAMAGIGHP PRFFATLESCGVQPVKTVALADHQALSQADVAALVTAGQTLLMTEKDAVKCRDFAAANWW YLPVDAIMADERAQRLLADLATLAQR >gi|289776635|gb|GG745509.1| GENE 749 816501 - 817730 1246 409 aa, chain + ## HITS:1 COG:ycaQ KEGG:ns NR:ns ## COG: ycaQ COG3214 # Protein_GI_number: 16128883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 407 1 407 410 588 71.0 1e-168 MSVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVL FSRLGSYPQHWLDESLRSGELMEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWME EHAGSIAELLAHIGQNGPVRSADFIHPRKGASGWWEWKPHKRHLEGLFTAGEVMVVERRN FHRVYDLTQRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRPQWLADYYRLRQPSLPG LLAAWQEEGLVVPVNVEALGEMWLHRDALAQLESAPGGKLIASHSAVLSPFDPVVWDRKR AEQLFNFSYRLECYTPAPKRQYGYFVLPLLHQGKLVGRMDSKIHRKSQELEIFSLWLEEG VKITRGLEQGLRQAINDFARWQSAERILCRRLPEGLFVGQEQGWEINAD >gi|289776635|gb|GG745509.1| GENE 750 817794 - 817976 155 60 aa, chain + ## HITS:1 COG:ECs1000 KEGG:ns NR:ns ## COG: ECs1000 COG2835 # Protein_GI_number: 15830254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 105 86.0 2e-23 MDHRLLEIIACPVCNGKLYYSQDKQELICKLDSLAFPLRDGIPVLLETEARALTVEESHS >gi|289776635|gb|GG745509.1| GENE 751 817973 - 818719 875 248 aa, chain + ## HITS:1 COG:kdsB KEGG:ns NR:ns ## COG: kdsB COG1212 # Protein_GI_number: 16128885 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Escherichia coli K12 # 1 248 1 248 248 436 87.0 1e-122 MSFVVIIPARFASTRLPGKPLQDINGKPMIVHVLERARASGADRIIVATDHPDVASAVEA AGGEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLASSS SGMATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAHSRETIGDSLLR HIGIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDL ERVRAELR >gi|289776635|gb|GG745509.1| GENE 752 818857 - 819750 979 297 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3430 NR:ns ## KEGG: Kvar_3430 # Name: not_defined # Def: aminoglycoside phosphotransferase # Organism: K.variicola # Pathway: not_defined # 1 297 1 297 297 574 100.0 1e-162 MEQLRTELSHLLGEKLSRVECVSEKPATALWSLYDAQGNPMPLLARSFTTPGVARQLAWK ISTLARSGTVRMPVVYGVMTHEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEA LLAWHRQDSGGCVGMVDNTQDNLWSNWYRQRVEMLWSTLNLYQDTGLTMQDKRILFRSRE CLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDNLVNTGRFDRARFDLATKSLLPWLA >gi|289776635|gb|GG745509.1| GENE 753 819727 - 820506 909 259 aa, chain - ## HITS:1 COG:STM0990 KEGG:ns NR:ns ## COG: STM0990 COG1434 # Protein_GI_number: 16764350 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 258 1 258 258 389 81.0 1e-108 MLFTLKKIVGGLLLPLPALLLLIGIGIALLWFSRFQRTGKLCVSLGWLLLALLSLQPVAD SLLKPIEDSYPTWRGEQPVSYVVVLGGGYTWNPEWAPSSNLINNSLPRLTEGIRLWQANP GSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSDIIVLDRPKDTEEEAQAVKRAIGDAP FLLVTSASHLPRAMIFFRHAGLDPLPAPANQLAVTSPLNPWERAIPSPVWLMHSDRVGYE TLGRVWQWLKGGSGEPGQE >gi|289776635|gb|GG745509.1| GENE 754 820628 - 821428 933 266 aa, chain + ## HITS:1 COG:STM0991 KEGG:ns NR:ns ## COG: STM0991 COG0500 # Protein_GI_number: 16764351 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 257 1 257 267 443 81.0 1e-124 MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLEPLLAQLGPGPLRVLDAGGGEGQTAI KVAQLGHQVTLCDLSAEMVARARQAAVDKGVIDNMHFVQCAAQDIAQHLESPVDLVLFHA VLEWVAEPQEVLRTLWSTLRPGGGLSLMFYNANGLLMHNMVAGNFDYVQLGMPKKKKRTL SPDYPREPQQVYHWLEEIGWQIVSKTGVRVFHDYLREKRQQHDSYAALLELETRYCRQEP YLSLGRYIHVTALKSQAHSRRCKDKV >gi|289776635|gb|GG745509.1| GENE 755 821425 - 822747 1812 440 aa, chain + ## HITS:1 COG:mukF KEGG:ns NR:ns ## COG: mukF COG3006 # Protein_GI_number: 16128889 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 440 1 440 440 789 93.0 0 MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLEGEMSEGELVDAFRHVS DAFEQTSETISQRANNAINDLVRQRLLNRFTSEITEGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVFAPLKYSVAEIFDSIDLTQRIMDE QQQLVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLDAAGDKLQANLLRIQDST MARDDLHFVDRLVFDLQSKLDRIVSWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQTYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPADLEFEEFNEIREQLAA LIEAQLAVYKEKGIPLDLGLVAREFLAQYPRGRHFDVARIVVDQAVQLGVAQADFTGLPA KWQPINDYGAKVQAHVIDKY >gi|289776635|gb|GG745509.1| GENE 756 822728 - 823432 889 234 aa, chain + ## HITS:1 COG:STM0993 KEGG:ns NR:ns ## COG: STM0993 COG3095 # Protein_GI_number: 16764353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 234 1 234 234 422 94.0 1e-118 MSLTNIEQVMPVKLAQALANPLFPALDSALRAGRHIGLDELDNHAFLMDFQDYLEEFYAR YNVELIRAPEGFFYLRPRSTTLISRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQEL YDELLTLADESRLLKLVNNRSTGSDLDRQKLQEKMRASLNRLRRLGMVWFMGHDSSKFRI TESVFRFGADVRAGDDPREAQRRLIRDGEAMALENHLQLNDENEENQPDSGEEE >gi|289776635|gb|GG745509.1| GENE 757 823432 - 827880 6539 1482 aa, chain + ## HITS:1 COG:mukB KEGG:ns NR:ns ## COG: mukB COG3096 # Protein_GI_number: 16128891 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 1481 1 1481 1486 2314 91.0 0 MIERGKFRSLTLVNWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLRAGVCYSVLDVINSRHQRVVVGVRLQQVAGRDRKVDIKP FAIQGLPTSILPTQLLTETLNDRQARVVSLNELKDKLEAMEGVQFKQFNSITEYHSLMFD LGVVARRLRSASDRSKYYRLIEASLYGGISSTITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRIHLDKALEYRRDLFTSRS QLAAEQYKHVEMARELQEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDEL QIRLEEQNEVVAEATDQQEENEARAEAAELEVDELKNQLADYQQALDVQQTRAIQYNQAL QALERAKALCHLPDLTPESADEWLETFQAKEQEATEKMLSLEQKMSVAQTAHSQFEQAYQ LVAAINGPLARNEAWDVARELLRDGVNQRHQAEQAQGLRSRLNELEQRLREQQDAERQLA EFCKRQGKRYDIDDLETLHQELEARIASLADSVSNAQEQRMTLRQELEQLQSRTQTLMRR APIWLAAQNSLNQLCEQSGEQFESGQEVTEYLQQLLEREREAIVERDEVGARKRAIDEEI ERLSQPGGSEDPRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQV AEQLEGLEDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPTLPLFGR AARENRIETLHAERESLSERFATLSFDVQKTQRLHQAFSRFIGSHLSVAFEDDPEEEIRK LNSRRGELERALNAHESDNQQNRVQYEQAKEGVSALNRLLPRLNLLADDTLADRVDEIQE RLDEAQEAVRFIQQHGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYAQQTQRDARQQAFAL AEVVQRRAHFSYSDSAEMLSGNSDLNEKLRQRLQQAESERSRAREAMRSHVAQLNQYNQV LASLKSSYDTKKELLNDLYKELQDIGVRADAGAEERARQRRDELHTQLSNNRSRRNQLEK ALTFCEAEMDNLTRKLRKLERDYCEMREQVVSAKAGWCAVMRLVKDNGVERRLHRRELAY LSADELRSMSDKALGALRLAVADNEHLRDVLRISEDPKRPERKIQFFVAVYQHLRERIRQ DIIRTDDPVEAIEQMEIELSRLTEELTNREQKLAISSRSVANIIRKTIQREQNRIRMLNQ GLQSVSFGQVNSVRLNVNVRETHSTLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLEMQLIIAAPENISP EKGTTYKLVRKVFNNHEHVHVVGLRGFAAPVPEALPGTADAS >gi|289776635|gb|GG745509.1| GENE 758 828081 - 829871 1621 596 aa, chain + ## HITS:1 COG:ycbB KEGG:ns NR:ns ## COG: ycbB COG2989 # Protein_GI_number: 16128892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 596 1 615 615 909 75.0 0 MLLKKRYGRPLSALSLSLALAFAPLFNVQAAEPEVVPGDSSATPGELSVALTQSDGQSPA VAKLAGEQPLSMEAAANSRAQIEALLPAGYKPVFINPLVSLYAARDMKPMWENREAVQAF QQQLAEIAIAGFQPQFTTWVSLLTDPAVSGMARDVVLSDAMMGYLHFISGIPTQGTRWLY SSTPYKMATPPLSVINQWQLALDNGSLPVFIAGLAPHHPQYEAMHQSLLALVADSRPWPQ MTGSGSLRPGEWSNDIGALREILQRTGMLDNTANIVLPGDVVSPSAKKKSKPAARGVYDR QLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLRLLPGKLSTGIMV NIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPK VRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFN MPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDAGWNDTRISDALKQG DTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYDLTARSSAQILTKAEQLIR >gi|289776635|gb|GG745509.1| GENE 759 829808 - 830023 65 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262040975|ref|ZP_06014197.1| ## NR: gi|262040975|ref|ZP_06014197.1| hypothetical protein HMPREF0484_1213 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] hypothetical protein HMPREF0484_1213 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] # 1 71 1 71 71 137 97.0 2e-31 MYMHFWRTKGTLPGIIANVKAASPQENRALQRSSALFYPVLGQQNPLNYFIYLINCSAFV RICALDRAVRS >gi|289776635|gb|GG745509.1| GENE 760 830175 - 830726 144 183 aa, chain + ## HITS:1 COG:ECs1009 KEGG:ns NR:ns ## COG: ECs1009 COG3108 # Protein_GI_number: 15830263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 183 1 182 182 333 91.0 8e-92 MDKFDANRRRLLALGGAALGAAAILPAPAFATLSTPRPRILTLNNLHTGESLKAEFFDGR GYIQDELARLNHFFRDYRANKIKSIDPNLFDHLYRLQGLLGTNKPVQLISGYRSLDTNDE LRARSRGVAKHSYHTKGQAMDFHIEGISLSNIRKAALSMRAGGVGYYPRSNFVHIDTGPV RHW >gi|289776635|gb|GG745509.1| GENE 761 830740 - 831387 723 215 aa, chain + ## HITS:1 COG:ECs1010 KEGG:ns NR:ns ## COG: ECs1010 COG0491 # Protein_GI_number: 15830264 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 405 87.0 1e-113 MNYRIIPVTAFAQNCSLIWCEQTRLAALVDPGGDAERIKAVVAEAGVTLMQILLTHGHLD HVGAAAELAQHYGVPVIGPEKEDEFWLEGLPAQSRMFGLEDCQPLRPDRWLNEGDVVNVG NVALQVLHCPGHTPGHVVFFDDASRLLISGDVIFKGGVGRSDFPRGDHGQLIAAIKDKLL PLGDDVTFIPGHGPLSTLGEERRNNPFLQDEMPVW >gi|289776635|gb|GG745509.1| GENE 762 831464 - 832654 1634 396 aa, chain - ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 762 92.0 0 MFENITAAPADPILGLADLFRADDRPEKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLGIDGIPEFGRCTQELLFGKGNAIIADKRARTAQTPGGTGALRVAADFLAKNTDV KRVWVSNPSWPNHKSVFTSAGLEVREYTYYDAANHALDFEGLLASLTEAQAGDVVLFHGC CHNPTGIDPTLDQWQQLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAALHKELLV ASSYSKNFGLYNERVGACTLVAADQETVDRAFSQMKSVIRANYSNPPAHGASVVATILSN DALRAIWEQELTDMRQRIQRMRLLFVNTLQEKGASRDFSFISQQNGMFSFSGLTKEQVLR LREEFAIYAVASGRINVAGMTPDNMAPLCEAIVAVL >gi|289776635|gb|GG745509.1| GENE 763 832842 - 833921 1514 359 aa, chain - ## HITS:1 COG:STM0999 KEGG:ns NR:ns ## COG: STM0999 COG3203 # Protein_GI_number: 16764359 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 359 1 363 363 361 61.0 1e-99 MMKRNILAVVIPALLVAGAANAAEIYNKNGNKLDFYGKMVGEHVWTTNGDTSSDDTTYAR IGLKGETQINDQLTGYGQWEYNMDASNVEGSQPTKTRLAFAGLKAGEYGSFDYGRNYGAI YDVEAATDMLVEWGGDGWNYTDNYMTGRTNGVATYRNSDFFGLVDGLSFALQYQGKNDHD RAVRKQNGDGFSTAATYAFDNGIALSAGYSGSNRSVDQKADGNGDKAEAWATSAKYDANN VYAAVMYSQTYNMTPEEDNHFAGKTQNFEAVVQYQFDFGLRPSIGYVQTKGKDLQSRAGF SGGDADLVKYIEVGTWYYFNKNMNVYAAYKFNQLDDNDYTKAAGVATDDQAAVGIVYQF >gi|289776635|gb|GG745509.1| GENE 764 834513 - 835913 2046 466 aa, chain - ## HITS:1 COG:asnS KEGG:ns NR:ns ## COG: asnS COG0017 # Protein_GI_number: 16128897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 466 1 466 466 927 95.0 0 MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGFSFLAVYDGSCFDPVQAVINNSLPN YNQEVLRLTTGCSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVS TLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT SRHLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMQFFAERVDKDAIDRL QRFITADFAQVDYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYP KDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNATF >gi|289776635|gb|GG745509.1| GENE 765 836079 - 837296 1419 405 aa, chain - ## HITS:1 COG:pncB KEGG:ns NR:ns ## COG: pncB COG1488 # Protein_GI_number: 16128898 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Escherichia coli K12 # 6 405 1 400 400 720 86.0 0 MLLRTMTQFTSPVLHSLLDTDAYKLHMQQAVFHRYGDVHVAAEFRCRGDDLLGIYADAIR EQVESMRDLRLRDDEYHWLSTLPFFRQDYLDWLRDFRYDPRQVTVSNDNGKLNIRLTGPW REAIMWEVPLLAVISELVHRYRSPEMGVDQALNTLEHKLGDFASMTAGLDMRAFRLMDFG TRRRFSREVQEAIVQRLQQEPWFVGTSNYDLARRLHLAPMGTQAHEWFQAHQQISPNLAS SQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGPEFATRYQGLRHDSGDPVEWGEKAI AHYQKQGIDPLSKVLVFSDNLDLAKAVDLYRHFASRVKLSFGIGTRLTCDLPQVKPLNIV IKLVECNGKPVAKLSDSPGKTICHDKAFVRALREAFDLPPIKKAS >gi|289776635|gb|GG745509.1| GENE 766 837608 - 840223 3455 871 aa, chain + ## HITS:1 COG:STM1057 KEGG:ns NR:ns ## COG: STM1057 COG0308 # Protein_GI_number: 16764416 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Salmonella typhimurium LT2 # 1 871 1 870 870 1595 90.0 0 MTQQPQAKYRHDYRAPEYLISDIDLTFDLDAAKTVVTAESKVSRHAAASDVPLRLDGEDL TLIALQVNGQPWSDYKEENNQLVIGGLPEHFTLTIVNEISPAANTALEGLYQSGEALCTQ CEAEGFRHITWYLDRPDVLARFTTKIIADKAKYPFLLSNGNRMAQGELENGRHWVQWQDP FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE RFGLEYDLDIYMIVAVDFFNMGAMENKGLNVFNSKYVLARTDTATDKDYLDIERVIGHEY FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMLHTLLGEENFQKGMQLYFERHDGSAATCD DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVHDDYNPETEQYTLTISQRTPPTAEQAEKQ PLHIPFAIELYDNEGKVIPLQKGGHPLHPVLNVTQAEQTFVFDNVYFQPVPALLCEFSAP VKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVNRHQQGQPLSLPVHVADAF RAILLDEKIDPALAAEILTLPSANEIAEMFAIIDPIAIATVREALTRTLANELADEFLAV YHANKLDSYRVEHADIGKRALRNTCLRYLAFAEPTLGDKLVSAQYHQADNMTDALAALSA AVAAELPSRDALMQEYDDKWHQDGLVMDKWFILQSTSPAANVVETVRGLLNHRSFSMSNP NRVRSLIGAFASSNPAAFHAEDGSGYQFLVEMLTELNQRNPQVASRLIEPLIRLKRYDEK RQALMRAALEQLKGLENLSGDLFEKISKALA >gi|289776635|gb|GG745509.1| GENE 767 840321 - 841094 1107 257 aa, chain - ## HITS:1 COG:ECs1016 KEGG:ns NR:ns ## COG: ECs1016 COG1116 # Protein_GI_number: 15830270 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 252 1 252 255 373 84.0 1e-103 MNTARLTPGIPLLLNGVTKRYGDNTILNELDLHIPSGQFVAVVGRSGGGKSTLLRLLAGL EKPNAGELLAGATPLAAIQDDTRMMFQDARLLPWKTVIDNVGLGLKGAWRDAALQALASV GLESRAQEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALDALTRLEMQELIVSLWQ EHGFTVLLVTHDVSEAVAMADRVLLIEEKKIGLDLNVDIARPRRTGSAKLAELEAEVLDR VMKRGDSERAPRLFSHG >gi|289776635|gb|GG745509.1| GENE 768 841091 - 841882 1156 263 aa, chain - ## HITS:1 COG:ssuC KEGG:ns NR:ns ## COG: ssuC COG0600 # Protein_GI_number: 16128901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 261 16 276 278 389 90.0 1e-108 MAKSTHPLLLRLAPWLLPVGTVIVWQLASSVGWLSTRVLPSPEGVLKAFWTLSASGELWQ HLAISSWRALVGFAIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF GIDETAKIFLVSLGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFRHVILPGALPS IMVGVRFALGLMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVVAIILYAILGKLADV CAQLLERLWLRWNPAYHLQEANA >gi|289776635|gb|GG745509.1| GENE 769 841893 - 843038 1271 381 aa, chain - ## HITS:1 COG:ycbN KEGG:ns NR:ns ## COG: ycbN COG2141 # Protein_GI_number: 16128902 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 381 1 381 381 666 87.0 0 MSLNMFWFLPTHGDGRYLGTEEGARPVDYGYLQQIAQTADRLGFTGVLIPTGRSCEDAWL VAASMIPVTQRLKFLVALRPSVVSPTVAARQAATLDRLSNGRALFNLVTGSDPAELAGDG VFLDHTERYEASAEFTHIWRKLMEGETVTFNGKHQRVRDAKLLFPPLQQPRPPLYFGGSS DVAQDLAAEQVDLYLTWGEPPKQVAEKIAQVREKAARHGRRVRFGIRLHVIVRETNEEAW QAADSLISHLDDETIARAQAAFARTDSVGQKRMAALHNGRRDQLEISPNLWAGVGLARGG AGTALVGDAATVAERINEYAALGIDSFIFSGYPHLEEAYRVGELLFPLLDVAVPSIPQPQ NLRLQGEAVANEFIPRKVAQS >gi|289776635|gb|GG745509.1| GENE 770 843035 - 843997 1186 320 aa, chain - ## HITS:1 COG:ssuA KEGG:ns NR:ns ## COG: ssuA COG0715 # Protein_GI_number: 16128903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Escherichia coli K12 # 8 319 21 332 333 489 80.0 1e-138 MFNPLRALTLGGLLLFSALGHAAPAAPDALRIGYQKGSVSMVLAKSHQLLEQRYPGTHIS WIEFPAGPQMLEALNVGSIDIGSTGDIPPIFAQAAGADLVYIGSEPPKPKAEVILVAQGS PIHNVAELKGKKVAFQKGSSSHNLLLRALQLAGLKFSDIQPVYLAPADARAAFQQGNVDA WAIWDPYYSAALLQGGARVLTDGTDLKQTGSFYLASRPYAERNGAFIEGVLDTFTQADAL THSQRAQSITLLAKTMGLPEAVIASYLDHRPPTSVTPVSAETAARQQQTADLFYENKLVP KKVDIRARIWQPAAAQGAKS >gi|289776635|gb|GG745509.1| GENE 771 843990 - 844565 778 191 aa, chain - ## HITS:1 COG:ZycbP KEGG:ns NR:ns ## COG: ZycbP COG0431 # Protein_GI_number: 15800798 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 190 1 190 191 296 79.0 1e-80 MRVITLAGSPRYPSRSSALLEYARETLTAADIEVCHWHLQNFAPEDLLYARFDNPALQTL NEQLAGADGLIIATPVYKASFSGALKTLLDLLPERALEGKIVLPLATGGTIAHMLAVDYA LKPVLNALKAQEILHGVFADDSQVTDYQHKPQFTPNLQRRLDESLETFWQALHRPSSRAP SLTSLRGVEHV >gi|289776635|gb|GG745509.1| GENE 772 844754 - 844870 65 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSALRIELKKGFTNEGVVHELSWIPGVQTGGVLCAIRS >gi|289776635|gb|GG745509.1| GENE 773 844814 - 845824 977 336 aa, chain + ## HITS:1 COG:ECs1029 KEGG:ns NR:ns ## COG: ECs1029 COG0167 # Protein_GI_number: 15830283 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 625 91.0 1e-179 MYYPFVRKALFQLDPERAHEVTFQQLRRVTGTPLEMLVRQKVPARPVTCMGLTFKNPLGL AAGLDKNGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRIFRLVDAEGLINRMGFNNHGV DNLVENVKKAHFDGVLGINIGKNKDTPVEHGKDDYLICMEKVYPYAGYIAINISSPNTPG LRTLQYGEALDDLLSGIKNKQLELQQKHQKYVPVAVKIAPDLLPEELIQVADSLVRHNID GVIATNTTLDRSLVQGMKHCDETGGLSGRPLQLKSTEIIRMLSAELNGRLPIIGVGGIDS VIAAREKIAAGALLVQIYSGFIFKGPPLIKEIVTHI >gi|289776635|gb|GG745509.1| GENE 774 845994 - 846536 611 180 aa, chain + ## HITS:1 COG:no KEGG:KPK_3592 NR:ns ## KEGG: KPK_3592 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 180 1 180 180 369 99.0 1e-101 MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARRMLTPDAFAPSGFCVDDAALYFSF EEKCRDLELSKAQRAELVLNALTAIRFLKPQMPKSWHFIAHPHQWQPSGGDAACVWLSDT GEQVNLLVVEPGDNAALCLLAQPGLTLAGRVMQLGDVIKIMNDRLQPAQSAVSYSLGQAV >gi|289776635|gb|GG745509.1| GENE 775 846533 - 847600 1137 355 aa, chain - ## HITS:1 COG:STM1060_1 KEGG:ns NR:ns ## COG: STM1060_1 COG3217 # Protein_GI_number: 16764419 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Salmonella typhimurium LT2 # 1 259 15 273 273 474 84.0 1e-133 MRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPAPLHDGLHLTAPDGS SAVVRFSDFALQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQLRWLGPQLTRRVKRH DAVPLSFADGYPYLLANEASLRDLQQRCPASVSIEQFRPNLVVTGAAAWDEDSWKVIRVG EVVFDVAKPCSRCIFTTVSPERGQKHPTGEPLETLKRFRTALDNGDVDFGQNLIARNSGV IRVGDEVEILARGPAKAYGAGESDDIPAPEAPQQATVAIEWQGQQFTGNNQQVLLEQLEQ QGIRVPYSCRAGICGSCRIRLEEGEVSALKKNAVAGDGTILACSCVPKTALRLAP >gi|289776635|gb|GG745509.1| GENE 776 847742 - 849847 2957 701 aa, chain + ## HITS:1 COG:STM1061_1 KEGG:ns NR:ns ## COG: STM1061_1 COG0116 # Protein_GI_number: 16764420 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 686 88.0 0 MNSLFASTARGLEELLKTELEGLGATDCQVVQGGVHFQGDTRLLYQSLMWSRLASRIMLP LGECRVYSDLDLYLGVQAIPWTEMFNPGATFAVHFSGLNDEIRNSQYGALKVKDAIVDSF TRKNLPRPNVDRESPDLRINVWLNKETAHISLDLSGEGLHLRGYRDGTGMAPIKENLAAA IVMRSGWVPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGHWGFGGWAQHDDAIWKEVK AEAQTRARQGLAAYGSRFYGSDVDERVIERARRNARRAGIGELIDFAVKDVAQLNNPLPK GPYGTVISNPPYGERLESEPALIALHSLLGRIMKSQFGGWNLSVFSASPELLSCLQLRAD KQFKAKNGPLDCIQKNYHLAESEGGKPAMLAEDFANRLRKNLKKFEKWARQEGIECYRLY DADLPEYNVAIDRYGDWVVVQEYAPPKTVDAHKARQRLFDIIAATIAVLEIAPNKLVLKT RERQKGKNQYQKMAEKGDFIEVQEYNARLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKD FLNLFSYTGSASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLMQADVLGW LRESTEQFDLIFIDPPTFSNSKRMEDAFDVQRDHIRLMTDLKRLLRKGGTIMFSNNKRGF RMDHDGLAALGLKAQEISQKTLSQDFARNRQIHNCWLITAA >gi|289776635|gb|GG745509.1| GENE 777 849860 - 851767 2517 635 aa, chain + ## HITS:1 COG:STM1062 KEGG:ns NR:ns ## COG: STM1062 COG0488 # Protein_GI_number: 16764421 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 1 635 1 635 635 1059 88.0 0 MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRI IYEQDLIVARLQQDPPRNVAGTVYDFVAEGIAEQAAYLKAYHDVSHQVMTDPSDKNLNEL ARLQEQLDNLGLWQLDSRINEVIEQLGLNADAQLASLSGGWLRKAALGRALVSGPRVLLL DEPTNHLDIETIDWLEGFLKSFKGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQ YLLDKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERRE VMGSAKMQVEEASRSGKIVFEMENVNYQVDGKVLVKDFSAQIQRGDKIALIGPNGCGKTT LLRLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDRTVMDNLAEGKQEVMVNGKPRHV LGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLE ELIDGYQGTVMLVSHDRQFVDNTVTECWIFEGGGHIGQYVGGYHDARGQQAQSLAQKQTI VKKTTEVAQPKAETVKRGGNKLSYNLQRELEQLPQKLETLEAELQTLQEQVADPDFFGQS HDRTQQVLAQLAEAEQALEAAFERWEYLEGLKNGA >gi|289776635|gb|GG745509.1| GENE 778 851782 - 853050 1098 422 aa, chain + ## HITS:1 COG:ECs1034 KEGG:ns NR:ns ## COG: ECs1034 COG2995 # Protein_GI_number: 15830288 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli O157:H7 # 1 416 1 416 417 684 82.0 0 MCDHHHAARHILCPQCDLLVALPQLEHRQKAACPRCGTTLTTTWDAPRQRPTAYALVALF MLLLANLFPFIYMKVGGISSEIALLEIPNVLFTEDYASLGTFFLLFVQLVPAFCLVTILL LVNRVRMPAGLKAFLARILFHLKTWGMAEIFLAGVLVSFVKLMAYGDIGIGLSFIPWCMF CLLQLRTFQCVDRRWLWDDIAPMPAITQPLKVGVAGIRQGLRSCACCTAVLPADQTVCPR CHSKGTARRKNSLQWTLALLVTSFILYLPANIMPIMITDLLGDKMPSTIMAGVVLLWSEG SYPVALVIFIASIMVPTLKMIAIAWLCWNANGNGARDSERMHLIYEVVEFVGRWSMIDVF VIAVLSALVRMGGLMNIYPAIGAVMFALVVVMTMFSAMTFDPRLLWDREPDSSHEEIQQH GK >gi|289776635|gb|GG745509.1| GENE 779 853040 - 854677 2052 545 aa, chain + ## HITS:1 COG:STM1064 KEGG:ns NR:ns ## COG: STM1064 COG3008 # Protein_GI_number: 16764423 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Salmonella typhimurium LT2 # 1 545 1 545 546 916 82.0 0 MENKSGEAKVQKVKNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKT RIKSRSVDVGVVESATLTDDLTHVEIKARLNSGMQKLLHNDSVFWVVKPQVGREGISGLG TLLSGAYIELQPGSKGSVPAQYPLLDSPPLASPDAKGIRILLESSKAGQLSPGDPVLFRG YRVGSVETSTFDAQKRHITYQLFINAPNDRLVTTNVRFWKDSGIAVDLTAAGMRVEMGSL STLFGGGVSFDIPEGLDLGEPVANKTEYHLFDDQKSIQDSVFTEHIDYVMFFKDSVRGLQ PGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDDYRIPVEVRVEPQRLVNQLGGDPNIRAHI DDLINRGLRGSLKTGNLVTGALYIDLDFYPKAPPRGKIQEFNGYPIIPTISGGLAQIQQR LMDALDKINNLPLNPLLEQATSTLAQSEKTMQHVQTTLDSLNKITSSQSMQQLPADMQTT LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNDKSNALVFEAKDKKDPQ PKGAK >gi|289776635|gb|GG745509.1| GENE 780 854677 - 855240 638 187 aa, chain + ## HITS:1 COG:STM1065 KEGG:ns NR:ns ## COG: STM1065 COG3009 # Protein_GI_number: 16764424 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 285 77.0 3e-77 MKKWLLVAAVCVMTACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAGN GVVYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQDTLNVAV NGFHGRYDGRVIVSGEWLLKHQGQLIKRPFNIVLKQQQDGYDAMVKTLAQAWSQEAVAIA GELNRLP >gi|289776635|gb|GG745509.1| GENE 781 855730 - 856248 797 172 aa, chain - ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 339 97.0 1e-93 MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVIKMSETGGNYDKGYVEAELD INPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRIVNRRLIMGLADGEVLVDDRLIYTANDLKVGLFQDTSAF >gi|289776635|gb|GG745509.1| GENE 782 856318 - 858075 1831 585 aa, chain - ## HITS:1 COG:ycbZ KEGG:ns NR:ns ## COG: ycbZ COG1067 # Protein_GI_number: 16128922 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Escherichia coli K12 # 1 579 1 580 586 859 75.0 0 MTITKLTRTDLAPDMEPYQALFAQADLSQPAPSLSGDLQPRLFYALEQLLCTPAVSSFML VKAPEEPEYLQWLTAETRTLHEPTAPLYGVRYDVDGARVTLSPAQRAEDNFASTAPVVAA DWVEAEQLFGCVRQFNGDITLQPGLVHQANGGVLVISLRTLLAQPLLWVRLKNMVTRQRF DWLSIDESRPLPVSIPSMPLSLKVMLVGERESLADFQEMEPELCAQAIYSEYEDTLQFAD AETLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWIARQLREAA AFCEGEEITGEEMQTMLARREWREGYLAERMQDEILQEQILIETEGECVGQINALSVIEF PGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAKGMMIMQAFLMSELELEQQLP FSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNE KIEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVAENQFAIWAIDDITEALPML TQLMWDGEGQTLRQTIQERIAQATQQETRHRFPWPLRWLGGTSSN >gi|289776635|gb|GG745509.1| GENE 783 858261 - 858713 510 150 aa, chain + ## HITS:1 COG:ECs1040 KEGG:ns NR:ns ## COG: ECs1040 COG3120 # Protein_GI_number: 15830294 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 231 90.0 3e-61 MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQAAVDDLLTLENEPVLVHAWIEQ HMNPALMNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFVVWQRLAGLAQRRGKTLSETIV QLIEDAEHKEKYASKMSSLKHDLQELLGKE >gi|289776635|gb|GG745509.1| GENE 784 858824 - 859876 932 350 aa, chain - ## HITS:1 COG:ECs1041 KEGG:ns NR:ns ## COG: ECs1041 COG2885 # Protein_GI_number: 15830295 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 350 1 346 346 570 85.0 1e-162 MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLGWSQFHDTGWYNSSLNNNGPTHESQL GAGAFGGYQVNPYLGFEMGYDWLGRMPYKGDQVNGAFKAQGVQLTAKLGYPITDDLDIYT RLGGMVWRADSSNSIAGDNHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGDAGTVGV RPDNGMLSVGVSYRFGQEDAAPVVAPAPAPAPEVTTKHFTLKSDVLFNFNKATLKPEGQQ ALDQLYTQLSNMDPKDGSAVVMGFTDRIGSEAYNQQLSEKRAQSVVDYLVAKGIPAGKIS ARGMGKSNPVTGNTCDNVKARAALIDCLAPDRRVEIEVKGYKEVVTQPAA >gi|289776635|gb|GG745509.1| GENE 785 860229 - 860738 278 169 aa, chain - ## HITS:1 COG:ZsulA KEGG:ns NR:ns ## COG: ZsulA COG5404 # Protein_GI_number: 15800817 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Escherichia coli O157:H7 EDL933 # 1 169 1 169 169 209 75.0 3e-54 MFTSAHANRSAQASASAGHYAHRSGEQTANGLISEIVYREDQPMMTQLLLLPLLQQLGQQ SRWQLWLTPQQKLSREWVQSAGLPLSKVMQISQLSPCHTVDSMIRALRTGNYSVVICWLT EELTAEEHERLVNAAQEGCAMGFIMRPVRNQGTLGRQLSGLKIHSNLYH >gi|289776635|gb|GG745509.1| GENE 786 861068 - 861685 339 205 aa, chain + ## HITS:1 COG:yccR KEGG:ns NR:ns ## COG: yccR COG3070 # Protein_GI_number: 16128926 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Escherichia coli K12 # 8 202 1 195 209 200 51.0 2e-51 MINKGMIMRKLVCPRFPQFQACVSPLGQLHSRPLFGGYSLAIDDTVFAMVAEGDIYLRAC EQSAAYRVEHRNPLLTLRRHGRIVPMKYYQIDDALWRDETQLFRLSLLSWQSAQREKNHR RASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQQAWQRLRENNASLSLNVLLALEG AIVGVHAAALPTLRRQELLEWAGAR >gi|289776635|gb|GG745509.1| GENE 787 861699 - 863834 2600 711 aa, chain - ## HITS:1 COG:STM1073 KEGG:ns NR:ns ## COG: STM1073 COG1289 # Protein_GI_number: 16764432 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 706 1 706 717 1164 83.0 0 MISPLLRRYTWNSAWLYNVRIFIALCGTTLFPWWIGEVKLTIPLTLGVVAAALTDLDDRL TGRLRNLAITLVCFFIASASVELLFPWPPLFALGLTVSTIGFILLGGLGQRYATIAFGAL LIAIYTMLGVTLYDHWYLQPLFLLAGAVWYNLLTLSGHLIFPIRPLQDNLARSYEQLARY LELKSRLFDPDLEDESQAPLYDLALANGQLVATLNQTKVSLLTRLRGDRGQRGTRRTLQY YFVAQDIHERASSSHIQYQTLRDQFRYSDVMFRFQRMLSMQAQACQKLSRAILLREPYQH DAHFERAFMHLDAALDRVRASGASDEQINALGFLLNNLRAIDAQLATIESVQTTAPAGSN TETLLADDRLGGLNDIWLRLRRNMSPESALFRHAVRMSLVLCAGYAFIQFTGLQHGYWIL LTSLFVCQPNYNATRHRLALRIIGTLVGVAIGLPVLLLVPSIEGQLVLIVLTGVLFFAFR NVQYAHATMFITLLVLLCFNLLGEGFEVALPRIIDTLIGCAIAWAAVSFIWPDWKFRNLP RVLDRAMNANCRYLDAILEQYHQGRDNRLAYRVARRDAYNRDAELASVVSNLSTEPRADG AQRETAFRLLCLNHTFTSYISALGAHREKLSTPDILALLDDAVCYVDDALHHTPADEHRV QKSLTSLQSRIQHLEPRADSKEPLVLQQIGLLLALLPEICRLQQRVHAQTE >gi|289776635|gb|GG745509.1| GENE 788 863852 - 864298 343 148 aa, chain - ## HITS:1 COG:yccF KEGG:ns NR:ns ## COG: yccF COG3304 # Protein_GI_number: 16128928 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 134 1 134 148 217 87.0 7e-57 MRTILNILNFILGGFATTLGWLLATLVSIVLVVTLPLTRSCWEITRLSLFPYGNEAIHVD ELEPGRKNGLLNAGGTVLNILWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAAI ALWPVGRRVVSVETARAAREANARRRFQ >gi|289776635|gb|GG745509.1| GENE 789 864456 - 866477 2098 673 aa, chain + ## HITS:1 COG:helD KEGG:ns NR:ns ## COG: helD COG0210 # Protein_GI_number: 16128929 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 673 12 684 684 1063 77.0 0 MAQHPYDRVQLLNAGVKVSGDRHEYLIPFNQLLSVHCKRGLVWGELEFVLPDSKVVRLHG TEWSETQRFYHHLQTLWEQWSAEMSDIAAGVLKRQLATIERTRAEGKWLTRQQVADVQDN IRQALTGLPMPTSRLEAFDNCRELWRECQRWLGDIEATRLAHNQAFTEAMLEQYRGFFDG VESSPLNASQARAVVNGERSLLVLAGAGSGKTSVLVARAGWLLARGEAAAEQILLLAFGR QAAQEMDARIRERLASDDITARTFHSLALHIIQQGSKKVPTISKLESDSAARQALLVKSW QQQCQEKKAQAKGWRLWLEEEMGWQLPEGDFWQDKKVQRRMASRLDRWVSLMRMHGGSQA EMIAGAPEAVRDQFSKRVKLMSPLMKEWKAALKAENAVDFSGLIHQAVNILDKGRFVSPW KHILVDEFQDISPQRASLLAALRRQNSQTTLFAVGDDWQAIYRFSGAQLSLTTAFNHYFG EGDSCALDTTYRFNGRIGEIAHGFIQQNPHQLSKPLNSLTAGDKKAVTLLADDKLDDLLD KLSGYVKPEQRILLLARYHHLKPDALNKAATRWPHLQLDFMTIHASKGQQADYVIVLGLQ EGEDAFPAPARESIMEQALLPQPEDFPDAEERRLLYVAITRARHRVWLLFNKAQPSPFVD ILQALDVPVARKP >gi|289776635|gb|GG745509.1| GENE 790 866489 - 866947 647 152 aa, chain - ## HITS:1 COG:ECs1047 KEGG:ns NR:ns ## COG: ECs1047 COG1803 # Protein_GI_number: 15830301 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Escherichia coli O157:H7 # 1 152 4 155 155 276 89.0 9e-75 MELTTRTLSAQKHIALVAHDHCKDMLMKWVARHQALLAQHVLYATGTTGNLVSRATGLEV NAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV STADFIIQSPHFNQPLDILIPDYPRYLAERLK >gi|289776635|gb|GG745509.1| GENE 791 867101 - 867514 547 137 aa, chain + ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 257 94.0 5e-69 MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG YATLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLNV VMDRCPAIELPRLGLAK >gi|289776635|gb|GG745509.1| GENE 792 867544 - 867861 375 105 aa, chain - ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 105 18 122 122 177 83.0 6e-45 MIASKFGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELRAAPWYHVVMEDDD GQPIHTYLAEAQLSSETRDEHPEQPSLDELAKTIRQQLQAPRLRN >gi|289776635|gb|GG745509.1| GENE 793 867921 - 869123 602 400 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 26 393 21 386 396 236 33 2e-60 MTDSLFPRLVLAKGREKSLLRRHPWIFSGGVARMEGKARSGETIDIVDHQGKWLARGAYS PSSQIRARVWTFDRNEAIDSTFFERRLQQAQTWRAWLAERDGLDSYRLIAGESDGLPGVT IDRFGNFFVLQLLSAGAEYQRAAIISALQNLFPDCAIYDRSDVAVRKKEGLELAQGPVVG ELPPALLPITEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAV SALMGGCRQVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVFKLLRKYRDQGEKFDV IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMTTDLFQKIIADA AIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM >gi|289776635|gb|GG745509.1| GENE 794 869314 - 869868 561 184 aa, chain + ## HITS:1 COG:ybcL KEGG:ns NR:ns ## COG: ybcL COG1881 # Protein_GI_number: 16128528 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli K12 # 1 179 1 177 183 207 58.0 1e-53 MKTGIRMAVAMVAAVSSGAMAAPFSVSSDDMHDGQALARKHWFAGFGCTGGNVSPQLAWK NAPAGTRSFAVTVRDPDAPTGSGWWHWTVVNIASSVFSLPAGAGDKNSATLPGGAVQGRN DFGYAGFGGACPPAGDKPHRYRFTVWALDVPTLPVDAGASGALVGYLLHSHALASVQLTA MAGR >gi|289776635|gb|GG745509.1| GENE 795 869886 - 870674 870 262 aa, chain + ## HITS:1 COG:STM1082 KEGG:ns NR:ns ## COG: STM1082 COG2207 # Protein_GI_number: 16764441 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 4 262 1 259 259 292 60.0 5e-79 MESIHFQHNALTAAEVTTRRLCRLHRVRLFSPALCRVKRGSKVIVQGESRVLATPQQLIV LPADVELEVINQPENGLFCSDLLSLTPELLTTFKTRYLSEPPPGRLTSLCAPVTTELAFM WQSVLQAVREGLSTSLQLHQTMGLLLALHEAGYAGPLLVERQQDLSAQVRQLVMLSPAQA WSVSRVAKMLFLGESTLRRRLQQESQSFRQIVEEVRMAHALGQLQTTSRPIGEIAQNSGY QSGSRFTARFRQHYGLLPKHVR >gi|289776635|gb|GG745509.1| GENE 796 870723 - 871004 391 93 aa, chain + ## HITS:1 COG:STM1083 KEGG:ns NR:ns ## COG: STM1083 COG1254 # Protein_GI_number: 16764442 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Salmonella typhimurium LT2 # 1 93 1 93 93 140 68.0 5e-34 MASICTMAWVYGSVQGVGFRYSTQREALQLGLTGYARNLDDGGVEVLACGEAEQVEKLIA WLKAGGPRSARVDRVLTEPHQPTRSWEKFAILY >gi|289776635|gb|GG745509.1| GENE 797 871001 - 871330 557 109 aa, chain - ## HITS:1 COG:STM1084 KEGG:ns NR:ns ## COG: STM1084 COG2920 # Protein_GI_number: 16764443 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 193 88.0 7e-50 MFIFEGNEIETDSEGYLKDTTQWSEAMAEVIAAQEGITLAVEHWEVVRFVREFYLEFNTS PAIRMLVKAMSNKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI >gi|289776635|gb|GG745509.1| GENE 798 871419 - 872078 907 219 aa, chain - ## HITS:1 COG:yccA KEGG:ns NR:ns ## COG: yccA COG0670 # Protein_GI_number: 16128937 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 219 1 219 219 317 94.0 1e-86 MDRIITSSRDRSSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMY GLMFLTYKTANKPTGIISAFAFTGFLGYILGPMLNAYLSAGMGDLIGLALGGTALVFFCC SAYVLTTRKDMSFLGGMLMAGVVVVLIGMVANLFLQLPALHLAISAVFILISSGAILFET SNIIRGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD >gi|289776635|gb|GG745509.1| GENE 799 872392 - 873972 2027 526 aa, chain + ## HITS:1 COG:YPO2182 KEGG:ns NR:ns ## COG: YPO2182 COG4166 # Protein_GI_number: 16122412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 4 526 20 544 545 546 52.0 1e-155 MSLMVITGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVESDIEFNIISDLFEGLV SVTPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASP YASYPGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLSQPNAAFLAMLAHPSLVPID KVLVERFADKWTRPEHIVTSGPYKLTQWVVNERLVAERNAKYWDNAHTVINKVTYLPISS EAADVNRYKAGEIDIVYTVPINQFAQLQKTMGDQLDVSPQLATYYYEFNTTRPPFNDARV RRALNMALDKDIIAGKVLGQGQRPAWVISQPDIGGVTLRNPDYASWPREKRIAEAKKLLV QAGYDDSHPLVFTLLYNTYESHQRIAIAASSMWKKNLGVEVKLQNQEWKTMLDTMHTHNF DAVRYAWIADYDDAATFLNTFRTGDSENTSQYSNPAYDEALRNAAKASDVATRGKYYQQA EDLLAQDVPAIPVYHYVRTHLVKPRVGGFTPDKLGYYYTKDMYIKK >gi|289776635|gb|GG745509.1| GENE 800 874511 - 876937 1948 808 aa, chain + ## HITS:1 COG:sll1356 KEGG:ns NR:ns ## COG: sll1356 COG0058 # Protein_GI_number: 16330143 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Synechocystis # 31 806 48 826 849 738 48.0 0 MPDINPQNIKELRALVEQQLQYTLCVSLNKATHGDIFNAVALAIRHFQQDHFLLSQTRQR EERKKRVYYLSMEFLLGQSLRNNLLNMNLLAEMHHVVNDLGFDLDHLLDEEPDAALGNGG LGRLAACFIDSMATLDIAASGHGIKYEYGLFRQSFQNDQQIEHPDDWHSMHSPWLVEHHA QQILIPLGGYIEHSEDIDGNYNPMWLGWKTIVGIPHDYFVSGYRDTTTNKLRLYSAVASD SFNIHIFNRGDYIKAVSDKIASENISKILYPSDEVLTGKELRLTQEYFLVACTLRDIFRD YAEVNDDITFLPQHVAIQLNDTHPALAVVELMRILVDEYRLPWEQAWEITQNTCAYTNHT LMPEALETWPVTLFEKLLPRHLQIIFEINHRFLEEVARRWPDKNHLLSSLSLIDEHHDKQ IRMANLAIVGSHRVNGVAWLHSELVKKQLVPDFYFMTPEKFINQTNGVTPRRWVQQANPG LAAFLHQQLGEGWPTDLPLLSSLESLADDTAVIDNIRAIKFANKTALSQLVAQRYGIVLD PLAMFDCQVKRIHEYKRQLLNILHVIALYLDIKETGKTIAPKVHLFAGKAAPGYRMAKLI IQLINTVARKINRDPQVAGQLKVVFLEDYKVSLAEKIIPATDLSEQISTAGTEASGTSNM KFAMNGALTIGTYDGANIEIREAVGIDNFYLFGAVAEEIEESRRLGHHHDFYHQNPAMAR VVDTLVSGLFTSDRELFAPLHHMLIEGDHYCHLLDFDSYCQAQRQAMADFELPEQWHRRA LLNICRMGEFSSDRTIRGYARDIWGITC >gi|289776635|gb|GG745509.1| GENE 801 877002 - 877337 452 111 aa, chain + ## HITS:1 COG:no KEGG:KP1_1977 NR:ns ## KEGG: KP1_1977 # Name: not_defined # Def: putative anti-sigma factor antagonist # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 111 35 145 147 198 94.0 5e-50 MNVELHTEQGVKIIVPLVRRLDASVVQSFKQQLLEAIDPDTKNVLLDLSHVDFIDSSCLG ALVSILKSVNGQGELALCSLNDTIKNLFKLTRMDRIFSIKETRQDALNSLT >gi|289776635|gb|GG745509.1| GENE 802 877379 - 878914 1064 511 aa, chain - ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 241 511 1 271 271 337 59.0 2e-92 MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAHAA TATALNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLHPESLP DEKLQLLPARMMVNKRPVLIYHTRSAQVRVIVSISDIHLRDALYSDEDNAGLALSVNHQM ITRYGDVGPLKASPHQDIFSSPDYPFRIIYPESPFFSPSRLFQNGFGLLIFIFSVSLLFY FLLRKYLNVYTSEEENLRYAIAQGYIVPFYQPVVNGKTGEIYGVEILARWKNATTQRRSP AEFIPLAERTGLIIPLTRSLMAQVAAQMNPIFSKLPDGFHIGLNISVSHINAPSFIDDCL HYQRGFEGKAVKLMLEITEQEPLLLNDAVVDKLNTLHSRGFSIALDDFGTGYSGLSCLHE LVFDYIKIDQSFVGRVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQVQLEYLNRQNIH LLQGYYFWKPMPYVALVMLLLSKPKARIVEE >gi|289776635|gb|GG745509.1| GENE 803 879317 - 880333 1165 338 aa, chain + ## HITS:1 COG:YPO2958 KEGG:ns NR:ns ## COG: YPO2958 COG1840 # Protein_GI_number: 16123140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Yersinia pestis # 1 338 1 339 339 509 77.0 1e-144 MKFRLSPLRTAALVAASLFLAPQGMAADAQNGIVVYNAQHENLVKSWVDGFTKETGIKVT LRNGDDSELGNQLVQEGSASPADVFLTENSPSMVLVDNAKLFAPLDAATLQQVPAQYRPQ HGRWIGIAARSTVFVYNPAKISEAQLPHSLMDLAKPEWKGRWAASPSGADFQAIVSAMLA LKGEQATLDWLKAMKTNFVAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQSKTGENSKNT QLYYFKHQDPGAFVSISGGGVLASSKHKAQAQAFIKWITGKQGQDALRTNNAFEYAVGVD AASNPKLTPLKDLDAPKVEPSSLNSKKVIELMTQAGLL >gi|289776635|gb|GG745509.1| GENE 804 880427 - 881929 1919 500 aa, chain + ## HITS:1 COG:YPO2959 KEGG:ns NR:ns ## COG: YPO2959 COG1178 # Protein_GI_number: 16123141 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Yersinia pestis # 1 500 29 528 528 543 69.0 1e-154 MVALALLFSLLALLPLGFVVAVGFDTGWPTIKALVFRPRVGELLSNTLWLTVLAVPISIV LGVTLAWLTERTALAGRQLWSALAVAPLAIPAFVQSYAWVSAVPSLHGLSAGVFLSVLAY YPFIYMPVAAVLRRLDPTLEDVAASLGTPPWKVFFRVVLPQLRLAICGGALLVALHLLAE YGLYVMIRFDTFTTAIYDQFQSTFSGPAANMLAGVLALCCLAILLLESASRGKARYARIG AGAAREQKRLVLGKGAAFGAQLLLLLLVMLAMGVPLLVLCRWLWLGGIDNWLHADLWHSL RQTLLLGAGGALLTTVCAIPIAWLGVRYPRPLFRLLEGCNYITSSLPGIVTALALVTVTI HYARPVYQTEVTLFLAYLLMFMPRALINLRAGIAQAPVELENVARSLGRSPARALWSITM RLAAPGAAAGAALVFLGVSNELTATLLLSPLGTRTLSTGFWALTSEIDYVAAAPYALLMI VISLPLTAVLYMQSKKMAGL >gi|289776635|gb|GG745509.1| GENE 805 881931 - 882959 806 342 aa, chain + ## HITS:1 COG:YPO2960 KEGG:ns NR:ns ## COG: YPO2960 COG3842 # Protein_GI_number: 16123142 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Yersinia pestis # 2 341 4 348 349 377 58.0 1e-104 MLELSSISKSFADALVLDNLNLTVAPGSRTAIVGPSGSGKTTLLRILAGFETPDRGRIVM HGKSLFADGVFVPAHQRRIGYVPQEGALFPHLNVADNIAWGLDASREEKRRRVGALMEMV ALDAGLASHWPHEISGGQQQRVALARALAQQPALMLLDEPFSALDTGLRASTRKATADLL AETGIASILVTHDQNEALSFATQVAVMRQGRFAQVGTPLTVYSQPVDEETALFLGDALIL PARLSPGRASCALGDLATDALHPAGEGRVMLRPEQLSVSVSGPQESTAIIRDVDFSGQLS TLTLSMAGHERPIVLRTVSQPAWQPGAMVRLTVSGKARVFSG >gi|289776635|gb|GG745509.1| GENE 806 883203 - 884123 965 306 aa, chain + ## HITS:1 COG:mll1446 KEGG:ns NR:ns ## COG: mll1446 COG2199 # Protein_GI_number: 13471467 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Mesorhizobium loti # 113 296 49 261 263 111 34.0 2e-24 MPELHTPANRPGPAAVARVTLLPALLVIVAVAVGCALVSPPVGTRHEILTNPGLYIDLLA LLFLVFMLWSSAKVRMSHIAVNWVRYGLLLWIAGGTFDVMDEIVVQPRWMGYYCEDLLRL SGMLLTVVGVYKIIERINLLYVDARSQSLKDELTQLPNRRFFIDTIREKSGHALGLMILD IDFFKKINDSWGHLVGDEVLFSLGKQLAKLTSEQVQPARIGGEEFAIIVDGLSEPELHAL AQSILANARTILINHQTPLSISIGVGTWRPGEAQETFIRKVDEALYKAKHNGRGRVEWAP SAGAAG >gi|289776635|gb|GG745509.1| GENE 807 884120 - 884953 830 277 aa, chain - ## HITS:1 COG:ECs4883 KEGG:ns NR:ns ## COG: ECs4883 COG2207 # Protein_GI_number: 15834137 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 273 1 273 283 297 56.0 2e-80 MIEDLPDILHRLIGQKDHLQVRFPEPDISVPALAFNVPFPRLEIVLEGQLNEQGLPLAAS TLTTLQVLYVQAGKWTLPQWTGPATTLSILFGRQKLGFSIQRWDGKSLHTEKQSVSRLGP RVGSYLLLSLNEVSLQPDPLTARLVIAALLSHCREQLVGLEMRVSRSRDLFLAVQDYLEE NLSLPLTRESVAKRFHITPNYLSHIFQKSGSVGFNEYLTRVRLEKAKQLLRGYDLKVKEI AHNCGFVDSNYFCRVFKRYTERSPSEYRRHCRSAQQA >gi|289776635|gb|GG745509.1| GENE 808 885215 - 885982 941 255 aa, chain + ## HITS:1 COG:MT3735 KEGG:ns NR:ns ## COG: MT3735 COG5285 # Protein_GI_number: 15843245 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin # Organism: Mycobacterium tuberculosis CDC1551 # 25 217 13 214 291 67 29.0 3e-11 MNSSSANFLDALGASQTLSAQMKHELDTLGYTVVHNVVDAQWLSEMRLLIDTLVEREGDN LAMEHHQEATATRIANLINKGVIWEKVWSHPLILSACRYIFNGDFKVSSLNAREALYNGG HQPLHADWKKPRPDFPKVHLVNTIWAIDDLSAANGAPRIIPGTHLRPELPEEVLADPEQA HPDEIVFAAPAGSVMIYNAHAWHGGTRNREGSRRRVLHGLYIDRADTPQQDQRRWLTPET ASRLTPAQKWLLDVE >gi|289776635|gb|GG745509.1| GENE 809 885996 - 886337 486 113 aa, chain - ## HITS:1 COG:STM4116 KEGG:ns NR:ns ## COG: STM4116 COG1445 # Protein_GI_number: 16767381 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 4 106 7 109 117 122 59.0 1e-28 MDFNIVAVTACVSGVAHTYMAAERLEKVGHHEKWHLKVETQGALGVENRITAEDIARAEV VLLVTDIEIDDPQRFRGLRTIKTSIKSFLLQPQQIVEAVKSIMKKPVVYVELP >gi|289776635|gb|GG745509.1| GENE 810 886353 - 887228 732 291 aa, chain - ## HITS:1 COG:STM4115 KEGG:ns NR:ns ## COG: STM4115 COG1180 # Protein_GI_number: 16767380 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Salmonella typhimurium LT2 # 1 291 1 292 292 422 68.0 1e-118 MTLSAAPRISCEVIDTRADRARIFNLQRYSLNDGQGIRTVVFFKGCPHTCPWCANPESIS PRIQTLRRESKCLRCTRCQQDVAECPSGAWEQIGRDVTLDNLLQEVLKDEVFFRASGGGV TLSGGEVLMQAGFAARFLQRLRQWGIRTAIETAGDGAFDRFLPVAEACNEVLFDFKIMEP ERARSLLRMNQPRVLDNFRQLAARKINLIPRVPLIPGYTLNTDNFRQILAFLAPFALKEM HLLPFHQYGEPKYRLLGKPWTLASVKAPDEAEIQPYRVMAEAAGFHVTIGG >gi|289776635|gb|GG745509.1| GENE 811 887194 - 889491 2723 765 aa, chain - ## HITS:1 COG:pflD KEGG:ns NR:ns ## COG: pflD COG1882 # Protein_GI_number: 16131789 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 765 1 765 765 1366 85.0 0 MTNRTQRLKASLFAQPREISLERALLYTASHRQTEGEPVIIRRAKATAWILDKVMISIRE DELIAGNRTVKPRAGIISPEMDPYWLLNELDAFPTRPQDRFAISEEDKQIYREALYPYWE KRSMKDFINGQMTEEVKAAVNTQIFSVNQTDKGQGHIIIDYPRLLNHGLGALVAELKTHC ARQPENPFYQAVLILLEASQRHILRYAALAEEMAGHCQDPQRQQELLTIAAISRHNAQHR PTDFPQACQLFWYLNIILQYESNASSISLGRFDQYMLPFYQASLNQGQDPAYLKELLESL WVKCNDIVLLRSSSSARYFAGFPTGYTALLGGLTETGRSAVNVLSFLCLDAYQNVQLPQP NLGVRVNELIDRPFLRKTAETIRLGTGIPQIFNDEVVVPAFLNRGVSLEDARDYAVVGCV ELSIPGRTYGLHDIAMFNLLKVMEIVLQENEHQPDVSWDGLICQIRDKIRHYIKLMVEGS NICDIGHRDWAPVPLLSSFIEDCVQHGKDITAGGARYNFSGVQGIGIANLSDSLYALKGM VFDQQRLSFDQLMAVLKANFQTPEGEKIRARLINRFDKYGNDIDDVDNISADLLRFYCKE VEQYLNPRGGHFTPGSYTVSAHVPLGSVVGATPDGRLAGEQLADGGLSPMVGQDSQGPTA VLKSVSKLDNYLLSNGTLLNVKFTPATLAGDGGLNKLADFLQAFCKLKLQHIQFNVVNAD TLREAQQRPQDFAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL >gi|289776635|gb|GG745509.1| GENE 812 889541 - 889861 551 106 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 161 90.0 2e-40 MTHIIAVTACPSGVAHTYMAAESLESAAKAKGWQVKIETQGSIGIENELTAEEIAAADMV ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMNKIDSHLSQSA >gi|289776635|gb|GG745509.1| GENE 813 889882 - 890958 1724 358 aa, chain - ## HITS:1 COG:frwC KEGG:ns NR:ns ## COG: frwC COG1299 # Protein_GI_number: 16131787 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 1 340 1 340 359 500 87.0 1e-141 MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAATDPNLKKLFDI GVAGLTLMVPFLAAYIGYSISDRAALAPCAIGAWVGNSFGAGFFGALIAGMIGGLVVYYL KKIPVHKVLRSVMPIFIIPIVGTFITAGIMMWGLGEPVGALTANLTGWLQGMREGSIVVL AIIMGLMLAFDMGGPVNKVAYAFMLICVSQGVYSVVAIAAVGIAVPPLGMGLATLIGRKY FTAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPANMIGAASGCVTAALMGAQCYAG WGGLIVLPVVQGKLGFVAALLVGACVSAACVILLKAFAKKKPTDVAADDELDLDFEIN >gi|289776635|gb|GG745509.1| GENE 814 891268 - 893769 3151 833 aa, chain + ## HITS:1 COG:STM4110_2 KEGG:ns NR:ns ## COG: STM4110_2 COG1080 # Protein_GI_number: 16767376 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Salmonella typhimurium LT2 # 123 688 1 566 566 890 79.0 0 MALVIEFTCDLPNGVHARPASLVETLCNRFSSAIEWRNLRRETGGNAKSALAIIGSNTLK GDACELLISGEDEAEAFAALTAFMRDEFPHCDAPLPAAPTLDVQPVPESLSRLNPTLFHA HPVCAGSAGGTLVHLKSRDLHELGELPVAASPEQEQAALDNGLRLLVKDIELRLLDNDGT ASAILEAHRSLATDASLRQHLLGGILTGLSCAQAIVATGDHFCAQFRDSGNSYLQERVLD VRDVCFQLLQHIYGEDRFPVPGQLREAAICLADELTPSQFLELDKSQLKGLLLRSGGTTS HTVILARSFNIPTLVGVDLPALLPWVDTQVQIDGNAGLLVVDPSPAVARYYQQEAWLQAQ IRQQQQVWLDKAGQTQDGIRVEIAANIAHSVEAVAAFNQGAQSVGLFRTEMLYMDRPSAP SEDELYNIFCQALEPAAGRSIIVRTMDIGGDKPVAYLNIPAENNPFLGYRAVRIYEEYQA LFHTQLRAILRASAHGSLKIMIPMISSMEEILWVKERLAEAKQSLRAEQIPFDEKIPLGI MLEVPSVMFIIDQCCEEVDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYA VQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPAIPATKSRLAQLDSRACRQL LNQAMQCRTSLEVEHLLAQFRMRQQDVPLVSAECITLNSDWRSKEEVLKGMTDNLLLAGR CRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLAQPVVWGDEEAQFV IMLTLNKHSAGDQHMRIFSRLARRIMHAEFRQSLVSAESSEDIADLLRRELEL >gi|289776635|gb|GG745509.1| GENE 815 893807 - 894772 991 321 aa, chain - ## HITS:1 COG:yeaX KEGG:ns NR:ns ## COG: yeaX COG1018 # Protein_GI_number: 16129757 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 321 1 321 321 476 71.0 1e-134 MSDYQMFEAIVRDVEQITAQVKRFTLVSPTGAPLPGFSGGSHIIVQMQDGEQRYSNAYSL MSSPLDTTSWQIAVRLESPSKGGSRFMHQQVRPGDTLTVSTPNNLFAIEPQARKHLLIAG GIGITPFLSHIPELEQRQADWQLHYCFHDADNNAFVDALSAAPWRDRVNVHVSALGSRLD LPRLFADLEPGTHVYTCGPAALNEAVKAAAERHQVPASQLHFEQFIVEDKGGEAFTLVLA RSGREFTVPQDMTILQVIENNKAAKVECLCREGVCGTCETMILEGEADHRDQYYSEEEKA SQQSMLICCSRAKGGRLVLDL >gi|289776635|gb|GG745509.1| GENE 816 894829 - 896277 1805 482 aa, chain - ## HITS:1 COG:STM2791 KEGG:ns NR:ns ## COG: STM2791 COG1012 # Protein_GI_number: 16766102 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 482 1 482 482 629 64.0 1e-180 MSVFHSDLFRQQALIAGSWRDAADGTTLAVSNPSTGATLGQIPNMGRAEAQQAVDAAAAA LPAWRALTAAQRAALLKNWHRLILENKTALAQIMTAEQGKPLAEAEGEIAYAASFIEWFA EQGKRTNGEIIPSPGADKRLMVIRQGVGVCAAITPWNFPAAMITRKAGPALAAGCTMVIK PANETPFTALAMAELAIQAGIPQGVINVVTGQSREIGAVFTGDERVRKLSFTGSTEVGRV LMRQCAESIKKLSLELGGNAPFIVFDDADIDKAVEGALIAKFRNAGQTCVCVNRFYIHRA VYDQFCDKFVARVAALKVGDGSESDVQIGPLINADAGRKVQSLLDDALTRGATLLTGGKA HPLGGNFFTPTVIGDVQAGSLLLQEEIFGPVAALVKFDDEQQVIEQANNTIYGLASYFYS NDAARIWRVSEQLEYGMVGINTGLISNEVAPFGGVKQSGLGREGSEHGIEDYLEMKYLCQ GL >gi|289776635|gb|GG745509.1| GENE 817 896296 - 897420 1528 374 aa, chain - ## HITS:1 COG:ECs2511 KEGG:ns NR:ns ## COG: ECs2511 COG4638 # Protein_GI_number: 15831765 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 1 373 1 373 374 737 90.0 0 MSNLSPDFTLPINFCANPQDAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPN DYITREIIGENIVIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDG NLAHARNCENVANFDSEKATLVPVRLEEYAGFVFINMNPQAESVETQLPGLQDKVLEACP DVHDLKLAARFTTLTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQY GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMFNVTPIKGMMTVIYEFPVDEETTLQNYDIY FTNEELTDDQKALIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG IAHFHNLVAQVFQP >gi|289776635|gb|GG745509.1| GENE 818 897457 - 899064 2207 535 aa, chain - ## HITS:1 COG:ECs2510 KEGG:ns NR:ns ## COG: ECs2510 COG1292 # Protein_GI_number: 15831764 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 56 531 1 480 481 815 88.0 0 MLSNVKKKDVPLIAISLAAIVFIAATLSLFPQQTAQAADSIFNGVTRLLGSTVQVLVLLA LGLVLYLATSKYGNIRLGEGKVEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLN IAPQSPKALEYSIPYSFFHWGVSAWATYTLASLIMAYHFHVRKNKGLSLSGIISAITGVS PQGFWGRLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIF CMSSWIGINNGLQRLSKMVGWGAFLLPLVVLLVGPTEFITNNIINAVGLTTQNFLQMSLF TDPLGDGAFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLLLGSTAGCWFFF GVMESYAMHQFVNGVINVPQVMQTLGGETAVQQVLMSLPAGKLFLAAYLFVMIVFLASHM DAVAYTMAATSTRNLREGDDPDRGMRLFWCVVITLIPLSILFTGASLETMKTTVVLTALP FLAILLIKTGGFVRWLKQDYAHVPVNQIETHTPEPMIKAETLPVGTVLKGDGQSL >gi|289776635|gb|GG745509.1| GENE 819 900179 - 901264 1356 361 aa, chain - ## HITS:1 COG:ECs2509 KEGG:ns NR:ns ## COG: ECs2509 COG0473 # Protein_GI_number: 15831763 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 360 1 360 361 704 91.0 0 MKKTYRIAAIPGDGIGKEVLPEGIRVLQAAAQRWDLSLSFEQMEWASCEYYAHHGKMMPD DWREQLQGFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPCPLA GKKAGDIDFYVVRENTEGEYSALGGRANEGTEHEVVIQESVFTRRGVDRILRYAFELAQS RPRKTLTSATKSNGLAISMPYWDERVEEMAKNYPDIRWDKQHIDILCARFVLQPERFDVV VGSNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIAT IWAGAMMLDFLGNGDARYHAAHNGILAAIEQVIASGPKTPDMKGSASTQQVSDAICKAIL A >gi|289776635|gb|GG745509.1| GENE 820 901368 - 902309 1156 313 aa, chain + ## HITS:1 COG:ECs2508 KEGG:ns NR:ns ## COG: ECs2508 COG0583 # Protein_GI_number: 15831762 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 300 8 307 314 549 88.0 1e-156 MNNLPLLNDLRVFMLVARRAGFAAAAEELGVSPAFVSKRVSLLEQTLNVVLLHRTTRRVT ITEEGERIYEWAQRILQDVDEMMDELSDVRQVPQGTLRIISSFGFGRRVVAPALSALALQ YPQLELRFDVQDRLVDLVNEGVDLDIRVGDDIAPNLIARQLAANHRVLCASPQFLARHPP PKQLSDLAALPCLVIKERDHPFGIWQLHSKEGQHAIKVTGPLSSNHGEIVHQWCLDGQGI ALRSWWDVRENIASGHLVHVLPEFFQPANVWAVYVSRLATSAKIRTTVEFLRHYFQQHYP QHEPTASAVGRGD >gi|289776635|gb|GG745509.1| GENE 821 902306 - 903586 2062 426 aa, chain - ## HITS:1 COG:ordL KEGG:ns NR:ns ## COG: ordL COG0665 # Protein_GI_number: 16129262 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 426 1 426 426 787 88.0 0 MTEHTTSYYAASANKYEPFPTLEGSINCDVCVVGGGYTGLSSALHLAEMGYDVVVLEGAR IGFGASGRNGGQLVNSYSRDIDVIEKNYGPDAAKMLGSMMFEGGDIIRERIQRYQIQCDY RPGGLFVAMNHKQLETLEEQKANWERYGNTQLELLDREAIRREVDSDRYVGALLDHSGGH IHPLNLAIGEADAIRLNGGRVYEQSPVTRIQHSSPAVVSTARGQVTARYVIVAGNAYLGD KLEPELAKRSMPCGTQVVTTAPLSEEVARSLIPKNYCVEDCNYLLDYYRLTGDNRLLYGG GVVYGARDPDDVERLIMPKLLKTFPQLQGVKIDYRWTGNFLLTLSRMPQFGRLDNNIYYM QGYSGHGVTCTHLAGRLISELLRGDAERFDAFAKLPHYPFPGGRSLRIPFTAMGAAYYSL RDRLGV >gi|289776635|gb|GG745509.1| GENE 822 903589 - 905076 1958 495 aa, chain - ## HITS:1 COG:aldH KEGG:ns NR:ns ## COG: aldH COG1012 # Protein_GI_number: 16129261 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 495 1 495 495 843 83.0 0 MNFQHLAYWQEKAKNLAIETRLFINGEYCAAADNTTFETIDPAAQQTLAQVARGKKADVE RAVKAARQTFDNGDWSQASPARRKAVLTRFADLMETHCEELALLETLDTGKPIRHSLRDD IPGAARAIRWYAEALDKVYGEVAPTGGNELAMIVREPIGVIAAVVPWNFPLLLACWKLGP ALAAGNSVILKPSEKSPLTALRLAGLAKEAGLPDGVLNVISGFGHEAGQALALHPDVEVI TFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQKAVNATAGGIFYNQGQ VCIAGTRLLLEESIADEFLTLLKAQAQHWQPGNPLDPDTTMGMLIDNAHADNVHSFIRGG EAKSTLFLDGRKNPWPAAVGPTIFVDVDPASTLSREEIFGPVLVVTRFKSEEQALQLAND SDYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL EKFTELKTIWIALES >gi|289776635|gb|GG745509.1| GENE 823 905396 - 905953 520 185 aa, chain - ## HITS:1 COG:ycjC KEGG:ns NR:ns ## COG: ycjC COG1396 # Protein_GI_number: 16129260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 185 1 185 185 339 97.0 2e-93 MSDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT GERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH TPTTF >gi|289776635|gb|GG745509.1| GENE 824 905979 - 906731 322 250 aa, chain - ## HITS:1 COG:ycjL KEGG:ns NR:ns ## COG: ycjL COG2071 # Protein_GI_number: 16129259 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Escherichia coli K12 # 1 249 9 257 258 431 85.0 1e-121 MYKPVVGVVMCRNRLKGHQTQTLQEKYLNAIVNHGGLPIALPHALAEPELLNALVDKLDG IYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVAT GGTLYRRLFEQPELLEHREDPELPVEQQYAPSHQVEVQEGGLLSQLIPGCNTFWVNSLHG QGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRMLFDGFITAC QGHHAEKRRR >gi|289776635|gb|GG745509.1| GENE 825 906957 - 908378 1663 473 aa, chain + ## HITS:1 COG:ycjK KEGG:ns NR:ns ## COG: ycjK COG0174 # Protein_GI_number: 16129258 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli K12 # 1 473 27 498 498 889 90.0 0 METNIVEVENFVQQTEERRVSAFAKEVKRYLETYPDTQYVDVLLTDLNGCFRGKRIPVAG LSKLEKGCYFPASVFAMDILGNVVEEAGLGQDMGEPDRSCIPVPGTLTPSAADPQSIAQV QLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRKRDAEGYLQPPCA PGTDDRNTQSQVYSVDNLNHFADVLYDIDELAKLQLIPADGAVAEASPGQFEINLHHTDN VLDACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMLNNKGENVLVDGD GEDSVLLKRALAGMIDLMPASMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC GERQNHRVEYRVAGADANPYLVMAAIFAGILHGLDNPQLPLQEEVEGNGLEQEGLPFPIR QSDALWEFMQNDHLRERLGERFCHVFHACKHDELLQFERLITETEIEWMLKNA >gi|289776635|gb|GG745509.1| GENE 826 908732 - 910123 2061 463 aa, chain + ## HITS:1 COG:ycjJ KEGG:ns NR:ns ## COG: ycjJ COG0531 # Protein_GI_number: 16129257 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 449 19 467 479 783 92.0 0 MAINLPAHNAAQAGRPRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISNGHVPASYL LALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSISPHVGFMVGWSSLLDYLFLPMINVLL AKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFVILVVQ GLHKGEGVGTVWSLQPFISQNAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK AIFLTAMYGGIIFIVASFFMQLFFPDIHRFKDPDAALPEIALYVGGKLFQSIFLCTTFVN TLASGLASHASVSRLLYVMGRDNVFPERIFGYVHPKWRTPALNVIMVGIVALSALFFDLV TATALINFGALVAFTFVNLSVFNHFWRRKGYNKTWKDRLHYLLLPMVGALTVGVLWINLE ATSLTLGLVWAALGLLYLAYLTRRFRKPPPQFDATKAEQAWES >gi|289776635|gb|GG745509.1| GENE 827 910243 - 910365 135 40 aa, chain - ## HITS:1 COG:no KEGG:KP1_2008 NR:ns ## KEGG: KP1_2008 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 40 22 61 61 63 100.0 2e-09 MSGLILFIVAVALLGVAIYSLVSYLKERRASQLPVHKKKK >gi|289776635|gb|GG745509.1| GENE 828 910622 - 910843 341 73 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3355 NR:ns ## KEGG: Kvar_3355 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 73 1 73 73 125 100.0 5e-28 MYKKSLSLLGVVLALSAFASQAESERQASREQIVEQVLKPCEGKKAGDKVVITDRRGGEH EAICTLTAVPLPE >gi|289776635|gb|GG745509.1| GENE 829 910864 - 911652 817 262 aa, chain - ## HITS:1 COG:mll6686 KEGG:ns NR:ns ## COG: mll6686 COG0300 # Protein_GI_number: 13475580 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Mesorhizobium loti # 7 262 5 260 276 208 45.0 7e-54 MTQPSHTAFITGASSGIGAIYAERLAARGYNLILAARREDRLLALADQLQARYAIQASIL KADLSEEHGIAAVEQRLQQDPAIDLFINNAGTAKMAGFLASTPREHQAIHTLNTTALLRL SYAALAAFIPRRRGTLINIASILALHTLPGSAVYSASKAWVLSFTRGLQDEFADSGVRIQ AVLPAATATDLWPTSGVALNALPTGTVMTTEDLVDAALRGLEMGEQVTLPPVHDLGLWEA FEQSRLALFTSARTGQPAPRYR >gi|289776635|gb|GG745509.1| GENE 830 911768 - 912217 542 149 aa, chain - ## HITS:1 COG:PA1607 KEGG:ns NR:ns ## COG: PA1607 COG1733 # Protein_GI_number: 15596804 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 144 2 144 146 154 54.0 6e-38 MKRTRLENSCCPIARSLDVIGDWWSLLIVRDALRGVRRFSEFQKNLGIAKNMLAGRLKML VDEGILRLQPASDGSAWQEYVLTDKGRALQTVLVALSQWADDYLFEPDEPATRLIDRQQR QPLRKLVLQAADGRELAPADITIAIPLND >gi|289776635|gb|GG745509.1| GENE 831 912370 - 913617 1807 415 aa, chain + ## HITS:1 COG:no KEGG:KP1_2013 NR:ns ## KEGG: KP1_2013 # Name: agp # Def: glucose-1-phosphatase/inositol phosphatase # Organism: K.pneumoniae_NTUH-K2044 # Pathway: Glycolysis / Gluconeogenesis [PATH:kpu00010]; Microbial metabolism in diverse environments [PATH:kpu01120] # 1 415 7 421 421 811 97.0 0 MKKRLLAAAVAGAVMLSAGAQAQDTAAPEGYQLQQVLIMSRHNLRAPLANNGSVLEQSTA KAWPQWDVPGGQLTTKGGVLEVYMGHYMREWLAQQKLVTSGECPPENAVYAYANSLQRTV ATAQFFITGAFPGCGIAVHHQPQMGTMDPTFNPVITDDSPAFREKALQAMEKERQGMQLT ESYKLLETMIDYRNSPSCKEKQVCSLSEGKDTFSAGYQQEPGVSGPLKVGNSLVDAFTLQ YYEGFPKDQVAWGEITSDKQWQVLSKLKNGYQDSLFTSVAVAQNVAKPLVKYIDNALVGE EANKAKVTLLVGHDSNIASLLTALDFKPYQLPGQYERTPIGGKLLFQRWHDSAGNRDLMK IEYVYQSTEQLRNADALTLQAPPQRVTLVLNGCPVDDQGFCPLETFKKVINEAAK >gi|289776635|gb|GG745509.1| GENE 832 913685 - 913912 494 75 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3351 NR:ns ## KEGG: Kvar_3351 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 75 1 75 75 124 100.0 1e-27 MPTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDK DALFWGEQTIERKNV >gi|289776635|gb|GG745509.1| GENE 833 913933 - 914529 762 198 aa, chain - ## HITS:1 COG:STM1119 KEGG:ns NR:ns ## COG: STM1119 COG0655 # Protein_GI_number: 16764477 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Salmonella typhimurium LT2 # 1 198 1 198 198 326 88.0 2e-89 MAKILVLYYSMYGHIETMAHAVADGANRVDGVEVVVKRVPETMQAEAFAKAGGKTQNAPV ATPQELAEYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKIASVFSSTGTGGGQ EQTITSTWTTLAHHGMIIVPIGYGAQELFDISQVRGGTPYGATTIAGGDGSRQPSEEELA IARYQGEHVAKLAVKVHG >gi|289776635|gb|GG745509.1| GENE 834 915302 - 916240 1172 312 aa, chain + ## HITS:1 COG:PA3605 KEGG:ns NR:ns ## COG: PA3605 COG0697 # Protein_GI_number: 15598801 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 3 289 11 300 308 94 33.0 2e-19 MSSLKFSITRQEALLIMITMFWGGTFLAVQYAVSLSGPLFFVGLRFATAALAVGLLSLRT LRGLTWLEVKAGVAIGVAIALGYGLQTWGLQSISSSKSAFITAMYVPLVPLLQWLCLGRM PGVMSCVGIVLAFIGLILLAGPENNLLALGVGEMITLASALAIAAEIILISAWAGKVDVR RVTVVQLATASLVAFAAMKPAGEAVPPLTPALLGVALGLGIFSAIIQVTMNWAQRSVSPT RATLIYTGEPVWAGIFGRLAGERLPLLALLGCVLILAGVLVSELKWKRKSPPQVSTNDDA QPLTDLADRREP >gi|289776635|gb|GG745509.1| GENE 835 916959 - 918281 733 440 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 24 434 8 427 447 286 38 1e-75 MALFDFPRWKLTSPAAESGVVAPDERLSAGQTLVMGVQHAVAMFGATVLMPLLMGLDPNL SILMSGVGTLLFFVVTGGRVPSYLGSSAAFVGVVIAITGFNGQGLNPHLSVALGGIIACG LVYTLIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVRSVSASAFDSWMAVLTV LCIGIVAVFTRGMLQRLLILVGLIVACALYALLANGFGLGKPLDFSPLAQAAWFGLPHFT TPSFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVG GSGVTTYAENIGVMAVTKVYSTLVFVAAALIAMLLGFSPKFGALIHTIPGPVIGGASIVV FGLIAVAGARIWVQNRVDLSQNSNLIMVSVTLVLGAGDFALSLGGFTLGGIGTATFGAIL LHALLHRGTREAKEARVTPV >gi|289776635|gb|GG745509.1| GENE 836 918303 - 918797 525 164 aa, chain - ## HITS:1 COG:ECs1253 KEGG:ns NR:ns ## COG: ECs1253 COG1853 # Protein_GI_number: 15830507 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli O157:H7 # 13 164 1 152 152 246 80.0 1e-65 MELADKANFRDAMAHVGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRSASVW PVFSEHHTLCVNTLAAGQEALSTLFGGKTAMDERFAAADWQTGATGCPRLEAALVSFDCR IDQRVSVGTHDILFCHVVAITRHPEPRGLMWFDRGYHTLMRPAC >gi|289776635|gb|GG745509.1| GENE 837 918808 - 919398 664 196 aa, chain - ## HITS:1 COG:ECs1254 KEGG:ns NR:ns ## COG: ECs1254 COG0778 # Protein_GI_number: 15830508 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 195 1 195 196 309 77.0 2e-84 MNDAINHTACETLFTQARTHNGWLDKPVSDAQLQAIWDLMKMGPTSANCSPARIVFVRSA EGKEKLRPTLSSGNLQKTMQAPVTAIVAWDSAFYDRLPTLFPHGDARSWFTSSPQLAEET AFRNSSLQAAYLIFACRALGLDTGPMSGFDREKVDAAFFADNGWKSNLLVNIGYGDPGKL YGRLPRLSFDEACLLA >gi|289776635|gb|GG745509.1| GENE 838 919395 - 920195 905 266 aa, chain - ## HITS:1 COG:ycdJ KEGG:ns NR:ns ## COG: ycdJ COG0596 # Protein_GI_number: 16128975 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 248 1 248 266 325 65.0 5e-89 MRLNIAPAPWPGAPVVVLSAGLGGGGGYWLAQRAALEAQYQLVSYDHNGTGENAGPLPAD YSMATMAQELLSALQAAGITRFALVGHALGALIGLQLALDRPEAVSALVLVNGWLTLSPH TRRCFLVRERLLHAGGAQAWVEAQPLFLYPAEWMAARLPRLEAEDALAISHFQGKENLLK RLQALKQADFSRRAAAIACPTLIVSAADDLLVPASCSRVLQTAIPGSQRVEMPWGGHACN VTDADTFNTILRDGLAAMLPVAREIR >gi|289776635|gb|GG745509.1| GENE 839 920195 - 920587 586 130 aa, chain - ## HITS:1 COG:AGc4539 KEGG:ns NR:ns ## COG: AGc4539 COG0251 # Protein_GI_number: 15889764 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 127 11 137 138 215 82.0 1e-56 MPKQVIIPPGTTTPIAPFVPGTLADGVVYVSGTLPFDKQNNVVHIGDPKAQTRHVLETIK SVIETAGGSMADVTFNSIFITDWTNYAAINEVYAEFFPGDKPARFCIQCGLVKPDALVEI ASVAHIGTPT >gi|289776635|gb|GG745509.1| GENE 840 920580 - 921290 990 236 aa, chain - ## HITS:1 COG:ycdL KEGG:ns NR:ns ## COG: ycdL COG1335 # Protein_GI_number: 16128977 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli K12 # 1 225 15 239 244 416 88.0 1e-116 MITLPARPESLTFAPQQSALIVVDMQNAYASQGGYLDLAGFDVSATRPVIDNINTAVAAA RAAGMLIIWFQNGWDDQYVEAGGPGSPNYHKSNALKTMRQRPELQGKLLAKGGWDYQLVD ELTPQEGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYF GIVLEDATHQAGPAFAQQAALFNIETFFGWVSDVESFCHALSPATPLSLAKEKRYA >gi|289776635|gb|GG745509.1| GENE 841 921290 - 922381 1523 363 aa, chain - ## HITS:1 COG:ECs1258 KEGG:ns NR:ns ## COG: ECs1258 COG2141 # Protein_GI_number: 15830512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 363 20 382 382 699 92.0 0 MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEF WDHNLESFTLMAGLAAVTSKIQIYATAATLTLPPAIVARMASTIDSISGGRFGVNLVTGW QKPEYDQMGMWPGDDYFASRYDYLTEYVQVLRDLWGTGRSDFKGDYFTMNDCRVSPRPSQ PMKVICAGQSDAGMAFSAQHADYNFCFGKGVNTPTAFAPTAARMMQAAEKTGRDVGSYVL FMVIADETDEAARAKWEHYKAGADEEALAWLTEQSQKDTRSGNDTNVRQMADPTSAVNIN MGTLVGSYASVARMLDEVASVPGTDGVLLTFDDFLAGIDAFGERIQPLMRCRDHIAPVTR EVA >gi|289776635|gb|GG745509.1| GENE 842 922667 - 923305 988 212 aa, chain + ## HITS:1 COG:ycdC KEGG:ns NR:ns ## COG: ycdC COG1309 # Protein_GI_number: 16128979 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 212 1 212 212 345 80.0 5e-95 MAQGAVKKSGKRSQAVSAKKEAILAAALEAFSQFGIHGTRLEQVAERAGVSKTNLLYYYP SKEALYVAVLQQILAIWLAPLKAFREDISPLVAIREYIRLKLEVSRDHPQASKLFCLEML QGAPLLMGELTGDLKALVDEKSAIVSGWIDRGKLAPVDPQHLIFMIWATTQHYADFATQV EAVTGATLQDAAFFEQTVDNVQRMIIEGIRVR >gi|289776635|gb|GG745509.1| GENE 843 923302 - 923697 575 131 aa, chain - ## HITS:1 COG:STM1123 KEGG:ns NR:ns ## COG: STM1123 COG3755 # Protein_GI_number: 16764480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 130 1 130 131 151 70.0 3e-37 MKRTLFAVMALLASGAALADECSNANTQTEMNQCAAAQYQAADKKLNDTWQQALQRAVGK QQTLLKQAQQAWIALRDADCAFLASGAEGGSMQPMLVSQCMTDKSVERESFLASLLQCED GDQSCPLPPAN >gi|289776635|gb|GG745509.1| GENE 844 924738 - 928700 6177 1320 aa, chain - ## HITS:1 COG:ZputA_2 KEGG:ns NR:ns ## COG: ZputA_2 COG4230 # Protein_GI_number: 15801003 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 526 1320 1 795 795 1365 87.0 0 MGTTTMGVKLDDATRERIKSAASRIDRTPHWLIKQAIFNYLEKLENDETLPELPALLNGA ANESDEAGSPAEEPYQPFLEFAEQILPQSVSRAAITAAWRRPETDAVPMLLEQARLPQSL GEQAHKLAYQLAEKLRNQKTASGRAGMVQSLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNETSLSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPFVIDYLIDL ATRSRRRLMIRLVKGAYWDSEIKRAQMEGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVVGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADNTLPLDELVADPVSAVEKLAQQEGQAGL PHPKIPLPRDLYGSGRSNSAGLDLANEHRLASLSSSLLNSALHKWQALPMLEQPVAEGEM QPVVNPAEPKDIVGYVREASDAEVQQALTSAINNAPIWFATPPQERAAILERAAVLMESQ MPTLMGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGVAILLEAGVPPGVIQLLPGRGETVGA ALTSDERVRGVMFTGSTEVATLLQRNIASRLDPQGRPTPLIAETGGMNAMIVDSSALTEQ VVIDVLASAFDSAGQRCSALRVLCLQEEVADHTLTMLRGAMSECRMGNPGRLTTDIGPVI DAEAKENIERHIQAMRAKGRTVYQAVRENSEDASEWRHGTFVPPTLIELDSFDELKKEVF GPVLHVVRYNRNELDKLVEQINASGYGLTLGVHTRIDETIAQVTGSAKVGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSSRPQDAVGVTFARQDAERPLDAQLKTLLE KPLQALQQWAAGRPELQALCQQYSEQAQSGTQRLLPGPTGERNTLTLMPRDRVLCVADNE QDALIQLAAVLAVGCEVLWPDSALQRDLAKKLPREVSERIRFAKAEQLPGQAFDAVIYHG DSDQLRELCEQVAARDGAIVSVQGFARGETNLLLERLYIERSLSVNTAAAGGNASLMTIG >gi|289776635|gb|GG745509.1| GENE 845 929122 - 930630 2121 502 aa, chain + ## HITS:1 COG:putP KEGG:ns NR:ns ## COG: putP COG0591 # Protein_GI_number: 16128981 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Escherichia coli K12 # 1 498 1 498 502 855 95.0 0 MAISTPMLVTFIVYIFGMVLIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL LMGLPGAIFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEVNNNALTLPDYFTGRFED KSRVLRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIIYTFVGGF LAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENIDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNNNP SLAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA FLRKNAGQKELVWVGRMMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV MWSRMTRNGALAGMVIGALTVIVWKQFGWLGLYEIIPGFIFGSLGIVVFSLLDKAPSASM QQRFAEADAHYHTPPPVRATAE >gi|289776635|gb|GG745509.1| GENE 846 930765 - 931199 554 144 aa, chain + ## HITS:1 COG:no KEGG:KPK_3514 NR:ns ## KEGG: KPK_3514 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 144 6 149 149 276 100.0 2e-73 MTFRQGAMALVLAGLLSGCVAGGSSSTRAPKPGACPADRSMVQTTLYFGLSRPAGKDITA EEWQQFVDRDVTPRFRDGLTVFDARGQWLGQNGQVVREQSKALMVIHGNDAQSEAGIEAL RQGYKSRFAQESVMRVDQPVCVQF >gi|289776635|gb|GG745509.1| GENE 847 931231 - 932415 1804 394 aa, chain - ## HITS:1 COG:YPO2983 KEGG:ns NR:ns ## COG: YPO2983 COG1972 # Protein_GI_number: 16123164 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Yersinia pestis # 1 394 1 394 394 473 72.0 1e-133 MTAFFHFLLALVVILALAWLVSYDRQNIRIRYILQLIIIEIALAFFFLHAESGLWLVKNI SGFFASLLGFAAEGTNFVFGGMSEKGLAFIFLGVLCPIVFISALIGILQHWRILPIFIRV IGTLLSKVNGMGKLESFNAVSSLILGQSENFIAYKGVLGDLSSRRLFTMAATAMSTVSLS IVGAYMTMLDAKYVVAALILNMFSTFIVLSVINPTRPDSEQEIKLEKLHESQSFFEMLGE YILAGFKVAMIILAMLIGFIAMISAINALFATLFGLSFQQILGYVFYPLAWLIGIPLSDA LNAGSIMATKLVANEFVAMIELQKIAASMTPRGLGILSVFLVSFANFASIGIIAGAIKGL NEPQGNIVSRFGLRLVYSATLVSLLSASFAGLVL >gi|289776635|gb|GG745509.1| GENE 848 932686 - 933516 1269 276 aa, chain + ## HITS:1 COG:Z1519 KEGG:ns NR:ns ## COG: Z1519 COG0672 # Protein_GI_number: 15801008 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Escherichia coli O157:H7 EDL933 # 1 276 4 279 279 425 90.0 1e-119 MFVPFLIMLREGLEAALIVSLIASYLKRTQRGNWIGVMWIGVILAAALCLGLGIFINETT GEFPQREQELFEGIVAVIAVVILTWMVFWMRNVSRNVKQQLEQAVDKALQRGNHHGWALV MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGALLGLATAIVLGFLLYWGGIRLNLGVF FKWTSLFILLVAAGLAAGAIRAFHEAGLWNLFQDTAFDLSNVLSTHTLFGTLLEGIFGYQ ETPSVSEVAVYLLYLIPALVLFALPPRNNTTASRAA >gi|289776635|gb|GG745509.1| GENE 849 933571 - 934695 1746 374 aa, chain + ## HITS:1 COG:ECs1264 KEGG:ns NR:ns ## COG: ECs1264 COG2822 # Protein_GI_number: 15830518 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli O157:H7 # 2 374 3 375 375 624 87.0 1e-178 MIHFRRNALRATVAALLSSALGAQAADIPQVKVTVNDKQCEPMQVTVKAGKTQFIIQNHS QKALEWEILKGVMVVEERENIAPGFTQKLTANLQPGEYDMTCGLLTNPKGKLIVTGEATK DAAKADAVLSLGDAITAYKAYVTAETAQLVSGTKAFTDAVKAGDIEKAKALYAPTRQHYE RIEPIAELFSDLDGSIDAREDDFEKKAEDPKFTGFHRLEKALFGDNSVKGMEKYADQLNS DVLELQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANIDGAQKI VDLLRPQLQKENSALLAKVDANFKKVDSILSKYRTKDGFETYDKLTTADRNALKGPITTL AEDLAQLRGILGLD >gi|289776635|gb|GG745509.1| GENE 850 934700 - 935983 1592 427 aa, chain + ## HITS:1 COG:ycdB KEGG:ns NR:ns ## COG: ycdB COG2837 # Protein_GI_number: 16128983 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 426 1 422 423 729 83.0 0 MAQQKPHDVNEPSRRRLLKGIGALGGALAITGGCPVAHAAKAESSPGTLTPDARQEKQPF YGPHQAGILTPQQASMMLVAFDVLASDKADLERLFRLLTQRIAFLTQGGPAPDTPNPRLP PMDSGILGAWIAPDNLTMTVSVGHSLFDERFGLADKAPKKLQPMTRFPNDSLDAALCHGD LLLQICANTQDTVIHALRDVIKHTPDLLSVRWKREGFISDSAARSKGKETPINLLGFKDG TANPPSHDSALMDKVVWVTADQDEPAWTVGGSYQAARIIQFHVEFWDRTPLKEQQTIFGR DKHSGAPLGMKNEHDTPDYSKDPGGEVIALDSHIRLANPRTPETQSSLMMRRGYSYSLGV TNAGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFVLPGVVDEKHYL GESLLQA >gi|289776635|gb|GG745509.1| GENE 851 936488 - 937276 689 262 aa, chain + ## HITS:1 COG:STM1126 KEGG:ns NR:ns ## COG: STM1126 COG1702 # Protein_GI_number: 16764483 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Salmonella typhimurium LT2 # 1 261 23 283 284 492 95.0 1e-139 MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPIEAR NEAQAHYLNAIDNKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDL GFLPGDIAEKFAPYFRPVYDVLVKRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV ILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPSGVRSGLSDALARFEEDEMIGI VRFTTDDCVRSALCQRTLKAYY >gi|289776635|gb|GG745509.1| GENE 852 938093 - 938770 983 225 aa, chain - ## HITS:1 COG:STM0950 KEGG:ns NR:ns ## COG: STM0950 COG1335 # Protein_GI_number: 16764311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 367 90.0 1e-101 MSTPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPV ITTASVPQGPNGPLIPEIHENAPHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTI TSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASELQR TWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR >gi|289776635|gb|GG745509.1| GENE 853 938789 - 939649 1118 286 aa, chain - ## HITS:1 COG:STM0951 KEGG:ns NR:ns ## COG: STM0951 COG1741 # Protein_GI_number: 16764312 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Salmonella typhimurium LT2 # 1 286 1 286 286 461 78.0 1e-130 MKQITGVYTAPAQHWVGDGFPVRSMFSYQTHGQQLSPFLLLDYAGPYTFPAGSDKRGVGE HPHRGFETVTIVYAGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSEAFTRSGGEL KMIQLWVNLPAKDKMTAPGYQSITAGTIPTVALANGAGQVRVIAGQYDDVSGPAHTFSPL NVWDLQLNQGRDLTLRQPEGWSTALVVLEGEVIINGSESAREGQLAVLSQTGDALHLEAT AQAKVLLMAGEPLQEPIVGYGPFVMNNKTQIAEAVRDFNSGRFGQI >gi|289776635|gb|GG745509.1| GENE 854 939764 - 940669 867 301 aa, chain + ## HITS:1 COG:STM0952 KEGG:ns NR:ns ## COG: STM0952 COG0583 # Protein_GI_number: 16764313 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 301 5 303 303 447 81.0 1e-125 MQDLNDFAWFVQVVDHGGFAAAGRALDQPKSKLSRRIAQLEERLGVRLIQRTTRQFAVTE VGQTFYQHCKAMLIEAEAAQQAVETLRAEPRGSVRITCPVTLLHVHIGPMLARFMARYPG VTLHLEATNRRVDVVGEGIDVAIRVRPRPIEDSDLVMRVLADRGHRLVASPDLISRLGRP QAPSELSAWPGLSLGANKHQHKWQLTGPGGARAEVYFTPRMVTTDMLALREAAMAGVGVV QLPLLMVRDQLASGELEVVLDEWQPRREVIHAVFASRRGLLPSVRALVDYLSEEYQRMEE D >gi|289776635|gb|GG745509.1| GENE 855 940858 - 941304 118 148 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3327 NR:ns ## KEGG: Kvar_3327 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 148 60 207 207 289 100.0 2e-77 MYTYFKSKDELVKAIVLEEQNSALTAHNATYAGSYFDRLCAQVTSCISEIGYPITHQLWV EIMAESARNPELRKTYISSDDIMRKSFARLIQEGIAAGEFRRDINLEEITIIIFALIDGL IARQAINTTFSFKDDLPMFFDVMAKLLK >gi|289776635|gb|GG745509.1| GENE 856 941525 - 942388 440 287 aa, chain - ## HITS:1 COG:XF1250 KEGG:ns NR:ns ## COG: XF1250 COG0010 # Protein_GI_number: 15837851 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Xylella fastidiosa 9a5c # 1 286 4 291 293 235 44.0 8e-62 MTSKTLRLIFPQWQGGNNPPYYLGSQLLSFLSPEAKGPVEIVPVELPTTEPLPGINGITA KPSLIRQLNNAAALIEKHDPNSIVILGGDCLVSLAPFAHLLDKFGDKLGVLWIDSHPDVQ TAEQYPNAHAHVLGALMGTGDNDLVAHVKTKLNPSKIMIAGIHAPLPYEAEYLTRHNITT LAPEQVKSGADEVLEWIAKEKIAYLAIHIDLDVLDPSLFRSILFAKPGRGKHDFGDVAEG KLTIEDVLNLIAAATTKAVPVGLTIAEHLPWDMLNLKNMLSELPLLK >gi|289776635|gb|GG745509.1| GENE 857 943270 - 944208 1290 312 aa, chain + ## HITS:1 COG:STM1135 KEGG:ns NR:ns ## COG: STM1135 COG0111 # Protein_GI_number: 16764491 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 312 1 312 312 491 78.0 1e-138 MEIIFYHQTFDTPFWIRELEKQLPGARVREWKAGDNQPADYALVWHPPVEMLQGRALKAV FALGAGVDSILSKLRDHPDMLPLSIPLFRLEDTGMGRQMQEYAVSQVLHWFRRFDDYQAL KLASRWQPLPEYRADEFTVGIMGAGVLGAKVAESLQPWGFPLRVWSRSRKSWPQVQSFAG QAELGEFLQGTRVLINLLPNTAETAGIINQTLLAQLPDESYVLNLARGVHVVEEDLLAAL NSGKLKGAMLDVFSREPLPQESPLWAHPRVAMTPHVAAVTRPMEAITYIAETISRLERGE PVSGQVDRQRGY >gi|289776635|gb|GG745509.1| GENE 858 944297 - 945034 936 245 aa, chain + ## HITS:1 COG:STM1136 KEGG:ns NR:ns ## COG: STM1136 COG1387 # Protein_GI_number: 16764492 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 415 84.0 1e-116 MYPVDLHMHTVASTHAYSTLHDYIAEAKRKGIKLFAITDHGPDMADAPHYWHFVNMRIWP RLVDGVGILRGIESNIKNIEGEIDCSGPMLTSLDLIIAGFHEPVFPPQDRDTHTQAMIAA MASGKVHMISHPGNPKFPVDIPAIAEAAARYQVALEINNSSFISSRVGSEDNCRAIAAAV RDAGGWVALGSDSHTAFTLGEFTECRKILDAVDFPEERILNVSPRRLLNFLESRGMPAIP EFADL >gi|289776635|gb|GG745509.1| GENE 859 945057 - 945611 741 184 aa, chain + ## HITS:1 COG:ycdY KEGG:ns NR:ns ## COG: ycdY COG3381 # Protein_GI_number: 16128998 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 184 1 184 184 297 78.0 6e-81 MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAASWPLEQDELLARLQKSCEMQSL ATDYNALFVGEACSVPPYRSAWVEGSSEAEVRAFMSEHGIPTGEGPADHLGSLLLAASWL EDHATEDQSETLELLFADYILPWCGTMLGKVEAHAHTPFWRTMAPLTRDAIAAMWDELQE EDEQ >gi|289776635|gb|GG745509.1| GENE 860 945715 - 946197 585 160 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3322 NR:ns ## KEGG: Kvar_3322 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 160 1 160 160 265 100.0 5e-70 MNILFAIALTTGILSGIWGWVAVALGLLSWAGFLGCTAYFACPQGGLKGLAISSCTVMSG VVWALVIIHGSALAPQLQILSYMMTGIVAFLMCIQARQTLLSFVPGTFIGACATFAADGD WRLVVPSLALGLVFGYAMKNSGLWLAARAGKHKSFANDNA >gi|289776635|gb|GG745509.1| GENE 861 946350 - 946877 538 175 aa, chain + ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 171 1 171 177 238 70.0 5e-63 MAVQPEVILGDITTLEVDVIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGEC PPGHAVITIAGDLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLAAANNYRSIAFPA ISTGVYGYPKEEAAEIAVRTVTAFLTRYNPLERVLFVCFDEETAAIYRRLLASYP >gi|289776635|gb|GG745509.1| GENE 862 946944 - 947537 516 197 aa, chain + ## HITS:1 COG:ECs1862 KEGG:ns NR:ns ## COG: ECs1862 COG1309 # Protein_GI_number: 15831116 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 5 167 4 162 188 106 40.0 2e-23 MSEGKVQQKQQARRAEIVAAAQRCFAEKGLHGASVADIAREAGLSVGQLYRIFASKEAII EAIVSEIVHARVGEMIDENHNLARKAAVLAGRIPTSAATKSDNYLLMEINAEASRNPRLR EILVQADRRLKEEGGRLSQRYHPGLSDARRNAASELIAVLTEGAAYRCELCASTPVDKAD LEALYNMIFDRLFDEQA >gi|289776635|gb|GG745509.1| GENE 863 947572 - 948732 1460 386 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3319 NR:ns ## KEGG: Kvar_3319 # Name: not_defined # Def: acyltransferase 3 # Organism: K.variicola # Pathway: not_defined # 1 386 1 386 386 668 99.0 0 MNNTPVQREYFFDSIRAWLMLLGIPFHISLIYSSHSWHVNSAEPSWWLTLFNDFIHAFRM QVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVNGKAENW HTLSMYDKFNTLAWELISHLWFLLVLVVLTSLGVVLFKWLTRRPAGHGLAFSDTVTMGQL TMIFLALGVFYALIRRSLFLLYPPLLSNGLFNFVVMQTLFYLPFFVLGAQTFINPRLKTM FTTPSPWCCAAALLGFIAYRLNQQYGSGDGWMYETESVITMVLGLWMVNVVFSLGHRLLN FQSARVTYFVNASLFIYLVHHPLTLLYGAWITPAIKSNTLGFIVGLVFVVGIALILYEIH LRIPLLRFLFSGKPMNKPDKTPASAS >gi|289776635|gb|GG745509.1| GENE 864 949002 - 950537 1831 511 aa, chain + ## HITS:1 COG:STM1150 KEGG:ns NR:ns ## COG: STM1150 COG3131 # Protein_GI_number: 16764506 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Salmonella typhimurium LT2 # 1 511 1 511 511 958 90.0 0 MMKMRWLSAAVMLSLCTSSAWAFSIDDVAKEAKTLAGKGYEAPKSNLPSAFRDMKYADYQ QIQFNHDKAYWNNQKTPFKLEFYHQGMYFDTPVTINEVTATSVRKIKYSPDYFNFGNVQH DKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVLGQGQVYGLSARGLAIDTALP SGEEFPRFREFWIERPKATDKRLTIYALLDSPRATGAYRFVIMPGRDTVVDVQSKVYLRD KVGKLGVAPLTSMFLFGSNQPSPTLNYRPALHDSNGLSILAGNGEWIWRPLNNPKHLAVS SYAMENPQGFGLLQRGRQFSRFEDLDDRYDLRPSAWITPKGDWGKGKIELVEIPTNDETN DNIVTYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAYVMQTRRSTGDVKQSNLIRQ PDGTVAFIVDFTGADMKKLPADTPVAAQASTGDNAEIVENTVRYNPVTKGWRMILRLKVK DPKKTTEMRAALVNGDDTLSETWSYQLPANE >gi|289776635|gb|GG745509.1| GENE 865 950560 - 953058 3222 832 aa, chain + ## HITS:1 COG:STM1151 KEGG:ns NR:ns ## COG: STM1151 COG2943 # Protein_GI_number: 16764507 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Salmonella typhimurium LT2 # 3 832 13 842 847 1532 91.0 0 MPLSDAEKSALPDTSLQAVHQALDDEHQTFAREDDSPLGSVKARLAHSWPDSLSGDQLVK DDEGRTQLHAMPKARRSSMIPDPWRTNPVGRFWDRLRGRDVTPRYLSRLTQEERESEQKW RTVGTIRRYILLLLTLSQTVVATWYMKTILPYQGWALINPADMVGQNLWISFMQLLPYVL QSGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPAHRTALIMPI CNEDVDRVFAGLRATWESVKATGNAAHFDVYILSDSYNPDICVAEQKAWMELIAEVQGEG QIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGECLSSLVRLMEANPNAG IIQSSPRASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHC ALAPLPGEGNFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRW CQGNLMNFRLFLVRGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFL QPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSIILVWCKGPKEYGGFIRVTLSLLLE VLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTPWGEAFMRHGSQLLLGLVWA VGMAWLDLRFLFWLAPIVVSLILSPFVSAISSRATVGLRTKRWKLFLIPEEYSPPQVLKD TDAYLTLNRQRSLDDGFMHAVFNPSFNALATAMATARHRHGHILEIARERHVEQALNETP DKLNRDRRLVLLSDPVTMSRLHYRVWAAPEKYSSWVNAYQQLALNPLALKTK >gi|289776635|gb|GG745509.1| GENE 866 953125 - 953352 381 75 aa, chain + ## HITS:1 COG:STM1152 KEGG:ns NR:ns ## COG: STM1152 COG5645 # Protein_GI_number: 16764508 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 74 1 74 75 130 79.0 9e-31 MRILSIIAMALLLSGCGSIISRTVPGQGHGNQYYPGVQWDVRDSAWRYLTVLDLPFSLVF DTLLLPLDASHGPYN >gi|289776635|gb|GG745509.1| GENE 867 953353 - 953739 539 128 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3315 NR:ns ## KEGG: Kvar_3315 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 128 1 128 128 178 100.0 7e-44 MPKDSMFYATLEEAIDAAREEFLANNPDSDEESANVEQLNIQKYVLQDGDIAWQAEFFAD EDEQGECLPMLSGEAAQSVFDGDYDEIELRQEWLEENTLHEWDEGEFQLEPSLDTEEGQT AADEWDER >gi|289776635|gb|GG745509.1| GENE 868 953831 - 955069 1530 412 aa, chain - ## HITS:1 COG:yceE KEGG:ns NR:ns ## COG: yceE COG0477 # Protein_GI_number: 16129016 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 5 398 7 400 408 606 86.0 1e-173 MSSADTPINWKQNLTVTWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSI TFLFSAIASPFWGGLADRKGRKIMLLRSALGMSVVMMLMGMAQNIWQFLLLRALLGLLGG FIPNANALIATQIPRHKSGWALGTLSTGAVSGALLGPLAGGFLADHWGLRTVFFMTAAVL FICFLFTLFLIRENFVPIAKKEMLSAREVFSSLQNPKLVLSLFVTSLIIQVATGSIAPIL TLYVRDLAGNVSNIAFISGMIASVPGIAALMSAPRLGRLGDRIGPEKILIVALIISVLLL IPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSTSQISGRIFSYNQSFRDIGNVT GPLIGASVSANYGFRAVFLVTAGVVLFNAIYSTLSLRRPAAEASQPDRHSVN >gi|289776635|gb|GG745509.1| GENE 869 955240 - 956160 1058 306 aa, chain - ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 553 86.0 1e-157 MTHLPKFSPALLHPRYWLLWLGIGLLWLVVQLPYPLIYRLGNAIGRLAMRFMKRRAKIAY RNLELCFPEKSEQERHRMVVMNFESVGMGLMETGMAWFWPVRRIARWTDTIGFEHIRDVQ AQQRGILLIGIHFLTLEMGARMFGMNEPGIGVYRPNDNPVIDWLQTWGRLRSNKDMIDRK DLKGMIRALKKGEVVWYAPDHDYGPTASVFAPLFAVDQAATTSGTWMLAKMSKACIVPFV PRRKPDGKGYELIILPPECSPPLDDAETTAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPE GMPSRY >gi|289776635|gb|GG745509.1| GENE 870 956366 - 957430 1184 354 aa, chain + ## HITS:1 COG:STM1156 KEGG:ns NR:ns ## COG: STM1156 COG1054 # Protein_GI_number: 16764512 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Salmonella typhimurium LT2 # 1 348 1 348 350 643 85.0 0 MPVLHNRISNETLKAQMLAETEPRTTISFYKYFTIVDPQATRDALWVALTQLKVFGRIYL AREGINAQISVPESNVEALREFLYGFDPALAGLRFNIALEDDGKSFWVLRLKVRDRIVAD GIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEYEVGHFENALEIPADTFRDQ LPKAVEMMQDHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISDDVIAHCHQCGAPCDTHTNCLNDGCHLLFIQCPSCAEKFA GCCSEACMEEHKLPEEEQRKLRAGRENGNKIFNKSRGRLNTKLGIPEPESSEKP >gi|289776635|gb|GG745509.1| GENE 871 957416 - 957529 119 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRLFNMLVNNVREHFMIYLALWLLLAIIDLVWLWFF >gi|289776635|gb|GG745509.1| GENE 872 957602 - 958720 894 372 aa, chain - ## HITS:1 COG:STM1160 KEGG:ns NR:ns ## COG: STM1160 COG0665 # Protein_GI_number: 16764516 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Salmonella typhimurium LT2 # 1 371 1 371 372 593 75.0 1e-169 MQYDLIIIGSGSVGAAAGYYARRAGLNVLMTDAHQPPHQEGSHHGSSRLIRHAYGEGEKY VPLVLRAQQLWDELAEISGEAVFERTGVINLGPASSPFLANVAASARAFDLEVEELDAQA VMQRWPEIRLPDDYRAIFEPASGVLRSELAVETWIRLAREAGCAQLFNCPVSAIHHHADG VTIDTLDGEYHGKKLLISAGTWVTRLLPDLPIQPVRKVFAWFQADGRYSSKNHFPAFTGE LPNGDQYYGFPAEDNELKIGKHNGGQPVSTPQERSAFGAVASDGSESFPFLRNVLPGIGG CLHGASCTYDNTVDEDFIIDTLPGRPDTLLITGLSGHGFKFAPVLGEIASQFAQGQTSTF NLTPFSLARFSS >gi|289776635|gb|GG745509.1| GENE 873 958847 - 959101 199 84 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3309 NR:ns ## KEGG: Kvar_3309 # Name: not_defined # Def: biofilm formation regulatory protein BssS # Organism: K.variicola # Pathway: not_defined # 1 84 1 84 84 157 100.0 1e-37 MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQNPTQENSHDAEIGQTLWLTTDVARQF ISILEAGIAKIESGEYQENEYRRH >gi|289776635|gb|GG745509.1| GENE 874 959406 - 959657 409 83 aa, chain - ## HITS:1 COG:no KEGG:KP1_2061 NR:ns ## KEGG: KP1_2061 # Name: dinI # Def: DNA-damage-inducible protein I # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 83 20 102 102 155 97.0 5e-37 MRIEVSIAKTTALPNGALEALNNELSRRIAEQFPAIDSQVSVRYATGNQLSVFGALKEDK DRISEILQETWESADDWFVHDLS >gi|289776635|gb|GG745509.1| GENE 875 959731 - 960777 1322 348 aa, chain - ## HITS:1 COG:pyrC KEGG:ns NR:ns ## COG: pyrC COG0418 # Protein_GI_number: 16129025 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Escherichia coli K12 # 1 348 1 348 348 650 88.0 0 MTAQPQVLKIRRPDDWHIHLRDDDMLKTVVPYTSEFYGRAIVMPNLVPPVTTVAAAIAYR QRIMDAVPAGHDFTPLMTCYLTDSLDPAELERGFNEGVFTAAKLYPANATTNSSHGVTST DAIMPVLERMEKLGMPLLVHGEVTHAEIDIFDREARFIDTVMEPLRQRLPGLKVVFEHIT TKDAAEYVRDGNELLAATITPQHLMFNRNHMLVGGIRPHLYCLPVLKRNIHQQALRELVA SGFSRAFLGTDSAPHARHRKEASCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSLNG PRFYGLPVNESYVELVREETTVVDSIALPNDSLVPFLAGETVRWTMKR >gi|289776635|gb|GG745509.1| GENE 876 960903 - 961463 897 186 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3306 NR:ns ## KEGG: Kvar_3306 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 186 1 186 186 342 100.0 4e-93 MKKILIAAALIVSGLLSGCNQLTQYTVSEQEINQALQKRNHFAKDIGLKGVADAHIELQN LTSAIGREEPGKVTLTGVANVDLNSLFGTQKATIDLKLKALPTFDREKGAIFLQEMEVVD AKVAPEKLQSVIQALLPYLNQSLRSYFSQQPAYVLREDASTGEALAKKYAKGIEVKPGEI VIPFTN >gi|289776635|gb|GG745509.1| GENE 877 961579 - 962787 1546 402 aa, chain - ## HITS:1 COG:STM1166 KEGG:ns NR:ns ## COG: STM1166 COG0477 # Protein_GI_number: 16764522 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 400 1 400 402 619 86.0 1e-177 MSRVSQARSLGKYFLLVDNMLVVLGFFVVFPLISIRFVDQMGWAALMVGIALGLRQLVQQ GLGIFGGAIADRFGAKPMIVTGMLMRAGGFAAMAVAHEPWVLWLSCILSGLGGTLFDPPR AALVVKLVRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCSAGAALFIACAAF NAWYLPAWKLSTVKTPVREGLGRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG SPAAVKWMYAIEATISLTLLYPIARWSEKRYRLEHRLMAGLLVMTLAMLPIGMTSSLQQL FTLICLFYIGSIIAEPARETLGASLADSRARGSYMGFSRLGLAFGGALGYAGGGWLFDAG KAVGQPELPWLMLGAIGFITFLALWWQFSPKRSASGMLEPRT >gi|289776635|gb|GG745509.1| GENE 878 963016 - 963600 989 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16764523|ref|NP_460138.1| ribosomal-protein-S5-alanine N-acetyltransferase [Salmonella typhimurium LT2] # 1 194 1 194 194 385 93 1e-105 MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENKVFLKPWEPVRDDSHCYPSGWQ ARLSMIGEFHKQGSAFYFALLDAEEKEIVGVANFSNVVRGSFHACYLGYSIGEKWQGQGL MFEALTAAIRYMQRTQHIHRIMANYMPHNQRSGALLARLGFEKEGYAKDYLLIDGQWRDH VLTALTTPDWSAGR >gi|289776635|gb|GG745509.1| GENE 879 963610 - 964263 801 217 aa, chain + ## HITS:1 COG:STM1168 KEGG:ns NR:ns ## COG: STM1168 COG3132 # Protein_GI_number: 16764524 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 217 1 215 215 324 81.0 8e-89 MKYQLTAHEARVIGCLLEKQVTTPEQYPLSVNAVVTACNQKTNREPVMSLSEDEVQTLLD TLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAGEVAVVTTLLLRGAQTPGELRSR AQRMHEFSDMAEVESVLEGLATREDGPFVARLPREPGKRESRYMHLFCDDMDTLITTVEA LSPLEDDDDLRARVEALEGEVAELKARLDSLLHHLGD >gi|289776635|gb|GG745509.1| GENE 880 964266 - 965189 716 307 aa, chain + ## HITS:1 COG:STM1169 KEGG:ns NR:ns ## COG: STM1169 COG0673 # Protein_GI_number: 16764525 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 5 307 4 307 307 476 77.0 1e-134 MGTRLRIGVVGLGGIAQKAWLPVLGAAESWTLQAAWSPGKEKALRICETWRIPYADSLDA LAAQCDAVFVHTSTASHYEVVNHLLNAGVHVCVDKPLADKLSEAEALVELAARRHLTLMV GFNRRFAPLYRELKGRLGEAASLRMDKHRSDSVGNDLRFTLLDDYLHVVDTALWLADGQA RLRGGTLQITPQGEMLYAEHQFSSPRLQVTTSMHRRAGSQREWVQAVTDGGLYAVSEMRE WQEECGLGVVQRPVAGWQTTLEQRGFVGCARHFIECVQNQTVPETAGEQALLAQRVVDKL WRDAISE >gi|289776635|gb|GG745509.1| GENE 881 965301 - 966836 1038 511 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 404 41 1e-111 MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAIVTVIGMLAAPWVITITAPGFADT ADKFALTTQLLRITFPYILLISLASLVGAILNTWNRFSVPAFAPTFLNVSMIGFALFAAP YFHPPVLALAWAVTVGGVLQLAYQLPHLKKIGMLVLPRINLKDAGAMRVVKQMGPAILGV SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNH DEYCRLMDWGLRLCFLLALPSAVALGILAKPLTVALFQYGKFSAFDAAMTQRALVAYSVG LMGLIVVKVLAPGFYSRQDIKTPVKIAIVTLIMTQVMNLAFIGPLKHAGLSLSIGLAACL NAALLYWQLRKQKIFTPQPGWLTFLLRLVAAVVVMAAALLGVMHLMPEWSQGTMPFRLMR LLVVVVAGVVAYFATLLVLGFRVKEFARRTA >gi|289776635|gb|GG745509.1| GENE 882 966890 - 968104 1459 404 aa, chain - ## HITS:1 COG:RSp0078 KEGG:ns NR:ns ## COG: RSp0078 COG0477 # Protein_GI_number: 17548299 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 2 396 7 396 399 215 40.0 1e-55 MTPTSLSTRDAGWIIFILALGAGFSVASIYYAQPLLPLMGANLHLSVEGMGLVPTLTQAG YALGILFLLPLGDRHDRRRLILLKSAMLAILLFLCSLTGQLTSLLVVSLLIGMAATMAQD IVPAAAILAPAGKQGKMVGTVMTGLLLGILLSRTVSGVVGAVFGWRVMYQAAAVSVALIG LVMWRVLPRFAIHSTLSYPQLMASMAHLWLRYPALRRAALAQGALSVAFSAFWSTLAVML SEHYHMGSAVAGGFGIAGAAGALAAPLAGGLADKFGAGKVTQMGAALVTLSFALMFMLPL LPLHGQLALIALSAIGFDLGLQSSLVAHQNLVYSLEPQARGRLNALLFTVVFIGMSLGSV LGSKLYVLAGWNGVVTLAVVSGAIALAIRLLENARLIAAERRTS >gi|289776635|gb|GG745509.1| GENE 883 968214 - 969149 963 311 aa, chain + ## HITS:1 COG:slr1245 KEGG:ns NR:ns ## COG: slr1245 COG0583 # Protein_GI_number: 16330422 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 7 297 1 289 302 159 30.0 8e-39 MKRQERIDRIELMRTYIRIIEAGSLSAAAGQMDTTQATVSRRLQSLEGLLGVKLILRTTH AMKLTDDGERCYRHARQVVDAWLALEDDLRIADDQPVGVLRVRAPHAFGQQQLLAPLVAF LQRHPQLSVEWMLNDNTVDFLSDNIDCAIRVGAEVDPATVSVLLAEVPRCVVASPELLAK YPPLTSLEALSGLPWIAINTFYQHEVRLRHLESGQIVSTAITPCLSTDSLYVARNTALAG LGVAMVSSWTVVEDIAAGRLIELFPQWRPASLPVHLVYPWARYYPTRLRKFLDLMREIMP DLAGMQRPQSA >gi|289776635|gb|GG745509.1| GENE 884 969187 - 972426 3431 1079 aa, chain - ## HITS:1 COG:STM1185 KEGG:ns NR:ns ## COG: STM1185 COG1530 # Protein_GI_number: 16764541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Salmonella typhimurium LT2 # 1 1079 1 1067 1067 1162 74.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIESRQGDVRVIIVPNDEMQ TPHYSVLRVRKGEETSTLSYLLPKLHEEEMALPGDEEPAERKRPEQPALAAFVMPDAPPA PMLEEPVAAPAVAAAPVAAAAPAQPGLLSRFFSALKNIFSGTEEAKPVEVPVEKKAEEKP ERQQERRKPRSNNRRDRNDRNDRRDNRDNRDNRDNRDNRDTRADNAEGREPRESREENRR NRREKQPQNVEARDARQTVGDDADKAKSRDEQQPRRERSRRRNDDKRQAQQEAKVQTREE PEVQETEQEERVQTLPRRKPRQLSQKVRIESAVAEQTAEIAPETVVAEVATPRSEPVKAE LPAVVENVVEHDENGESREANGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVA CASPEMASGKVWIRYPVVRPQDQQPEEVPVQDTSAIEAIEAVATPVAVVETVTAAPVTVE PATMEPVTAEPVVVEPVVAAEPVIVDTPEIVEPAAVEPAPVEAPAVEAPQAIAPVTIDAE PVTVEPEVVETAPVVEAPVETIVPAKETVVEAPVTEAAPTAPAEPVKAETPVSKPVVVAG DRHATAPMTRAPAPDYVPEAPRHSTWVRPPFAFEGKGAAGGHSATRKATAEPTRPQPVE >gi|289776635|gb|GG745509.1| GENE 885 973084 - 974079 192 331 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 109 315 83 279 285 78 30 6e-13 MSGANASGYLESRTMKTETPTVKMVAIAADEAGQRIDNFLRTQLKGVPKSMIYRILRKGE VRVNKKRVKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALSEVILYEDDHILVLN KPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQ LRDKGMQKDYLALVRGQWQSHTKVVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERY EFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDKQLSGTGLNRLFLHAAALK FTHPGSGEVMRVEAPLDNQLKHCLQVLRKSK >gi|289776635|gb|GG745509.1| GENE 886 974117 - 974701 616 194 aa, chain - ## HITS:1 COG:yceF KEGG:ns NR:ns ## COG: yceF COG0424 # Protein_GI_number: 16129050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 194 14 207 207 328 84.0 3e-90 MSELILASTSPWRRMLLEKLGLPFECAAPDVDETPLPEESARQLVARLAQAKAQSLASRY PHHLIIGSDQVCVLDGEITGKPHTEENARRQLRKASGTIVTFYTGLALYNSATGHLQTEC EPFDVHFRHLSDKEIEGYVRKENPLQCAGSFKSEGLGITLFERLEGRDPNTLVGLPLIAL CQMLRRENNNPLLG >gi|289776635|gb|GG745509.1| GENE 887 974843 - 975364 342 173 aa, chain + ## HITS:1 COG:ECs1466 KEGG:ns NR:ns ## COG: ECs1466 COG1399 # Protein_GI_number: 15830720 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 300 92.0 8e-82 MQKVKLPLTLDPVRTAQKRLDYEGIYARDQVERVADSVVSVDSDVECSMSFAIDNQRLAV ITGDAKVTVTLECQRCGKPFPHHVHTTYCFSPVRNDEQAEALPEAYEPIEVNEFGEIDLQ AMVEDEIILSLPVVPVHDSEHCEVSDADMVFGELPEEAQKPNPFAVLASLKRK >gi|289776635|gb|GG745509.1| GENE 888 975381 - 975554 291 57 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152969641|ref|YP_001334750.1| 50S ribosomal protein L32 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 57 1 57 57 116 100 2e-24 MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGFYRGRKVIAK >gi|289776635|gb|GG745509.1| GENE 889 975695 - 976855 817 386 aa, chain + ## HITS:1 COG:STM1192 KEGG:ns NR:ns ## COG: STM1192 COG0416 # Protein_GI_number: 16764547 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 22 377 1 356 359 590 90.0 1e-168 MKLSEDSPGNWGITEPGSDDTLTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLV GDPDAITPLLAKADFEQRSRLQIIPAQSVIASDARPAQAIRSSRGSSMRVALELVKEGRA EACVSAGNTGALMGLAKLLLKPIEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLV QFAVMGAVLAEEVVGMTNPRVALLNIGEEEMKGLSSIRDAAAVLKTLPSLNYIGYLEANE LLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLAR RFSHLNPDQYNGACLLGLRGSVIKSHGAANQRAFSVAIEQAVQAVQRQIPQRIAARLESL YPAGFALPESDSDVNSRQQSGTNGHD >gi|289776635|gb|GG745509.1| GENE 890 976910 - 977863 1027 317 aa, chain + ## HITS:1 COG:ECs1469 KEGG:ns NR:ns ## COG: ECs1469 COG0332 # Protein_GI_number: 15830723 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 560 90.0 1e-159 MYTKIIGTGSYLPEQVRTNADLEKMVETSDEWIVTRTGIRERRIAAAHETVATMGFEAAK QALAMAGVSAEQIGLIIVATTSGTHAFPSSACQIQSMLGVKGCPAFDVAAACAGFTYALS VADQYVKNGAVDYALVIGADVLARTCDPTDRGTIIIFGDGAGAVVLGASEEPGIISTHLH ADGSYGELLTLPNADRVDPENPIYLTMAGNEVFKVAVTELAHIVDETLAANNLERSALDW LVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIQRGQLIL LEAFGGGFTWGSALVRF >gi|289776635|gb|GG745509.1| GENE 891 977879 - 978808 1104 309 aa, chain + ## HITS:1 COG:fabD KEGG:ns NR:ns ## COG: fabD COG0331 # Protein_GI_number: 16129055 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Escherichia coli K12 # 1 308 1 308 309 495 90.0 1e-140 MTQFAFVFPGQGSQAVGMLADMAATWPVIEETFGEASAALGYDLWALAQQGPAEELNKTW QTQPALLTASVALYRVWQQQGGKAPTLLAGHSLGEYSALVCAGVIGFADAVRLVELRGKF MQEAVPEGTGAMSAIIGLDDASIAKACEESAEGQVVSPVNYNSPGQVVIAGHKEAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAAEKLALELQKITFNAPTIPVVNNVDVKCETTP DAIRDALVRQLYSPVQWTKTVEFMAAQGVTHLYEVGPGKVLTGLTKRIVDTLTASTLNEP AAMSAALEQ >gi|289776635|gb|GG745509.1| GENE 892 978821 - 979555 267 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 107 30 1e-21 MSFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSESGAQAISDYLGANGKGLMLNV TDPASIESVLENVRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKA VMRAMMKKRHGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALTDEQRAGTLAAVPAGRLGTPNEIASAVAFLASDEASYITGETLHVNGG MYMV >gi|289776635|gb|GG745509.1| GENE 893 979766 - 980002 346 78 aa, chain + ## HITS:1 COG:ECs1472 KEGG:ns NR:ns ## COG: ECs1472 COG0236 # Protein_GI_number: 15830726 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 108 100.0 2e-24 MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYINGHQA >gi|289776635|gb|GG745509.1| GENE 894 980092 - 981333 1203 413 aa, chain + ## HITS:1 COG:STM1197 KEGG:ns NR:ns ## COG: STM1197 COG0304 # Protein_GI_number: 16764552 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Salmonella typhimurium LT2 # 1 413 1 413 413 720 95.0 0 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCD DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEVTEENATRIGAAIGSGIGGLGLIEENHS SLVNGGPRKISPFFVPSTIVNMVAGHLTIMFGLRGPSISIATACTSGVHNIGQAARIIAY GDADAMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKDRDGFVLGDGAGMVV LEEYEHAKKRGAKIYAEIVGFGMSSDAYHMTSPPEDGAGAALAMVNAIRDAGIEPGQIGY VNAHGTSTPAGDKAEAQAVKSVFGDAASRVMVSSTKSMTGHLLGAAGAVESIYSILALRD QAVPPTINLDNPDECCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKV >gi|289776635|gb|GG745509.1| GENE 895 981459 - 982268 641 269 aa, chain + ## HITS:1 COG:STM1198 KEGG:ns NR:ns ## COG: STM1198 COG0115 # Protein_GI_number: 16764553 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Salmonella typhimurium LT2 # 1 266 1 266 269 389 69.0 1e-108 MFLINGVEQDTLAANDRAAQFGDGCFSTARIQQGQVALLDAHLQRLQITCEKLQIPFHDW LTLSEEMQRLARPHAQGVLKVILTRGVGGRGYSTAGCVSPTRILSVSPFPAHYARWREEG ITLTQSPVPLGRNPWLAGLKHLNRLEQVLIRSHLEQTDADEALVLDSDGWLTECCAANLF WRQGRDVFTPRLDYAGVNGIMRQRCIAQLAPSAFRVVEVTARPEVLREADEVLICNALMP LVPVRRWEETVWSSRELYHFLAPLCELSG >gi|289776635|gb|GG745509.1| GENE 896 982279 - 983292 1306 337 aa, chain + ## HITS:1 COG:yceG KEGG:ns NR:ns ## COG: yceG COG1559 # Protein_GI_number: 16129060 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Escherichia coli K12 # 13 337 16 340 340 559 82.0 1e-159 MLRFILLLVVVLGIAAAAGMWKVRQLADSKLLIKEETIFTLEPGTGRLALGQDLYREKVI NRPRVFQWLLRVEPELSHFKAGTYRFTPQMTVREMLQLLASGKEAQFPLRFVEGMRVSDY LRQLRDAPYVKHTLDDDSYATVAKALGLEHADWVEGWFWPDTWMYTANTSDIAILKRAHQ KMVAEVAKIWEGRMDNLPYADQNQLLTMASIIEKETAVAEERDRVASVFINRLRIGMRLQ TDPTVIYGMGEGYTGKLTRKDLETPTAYNTYTISGLPPGPIAVPGEASLKAAAHPAKTSY LYFVADGKGGHTFTTNLVSHNRAVQDYLKVLKEKNAQ >gi|289776635|gb|GG745509.1| GENE 897 983282 - 983923 799 213 aa, chain + ## HITS:1 COG:STM1200 KEGG:ns NR:ns ## COG: STM1200 COG0125 # Protein_GI_number: 16764555 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 336 84.0 2e-92 MRSNYIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTVLAEKLRSLVLDIQST GDEVINDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTML ATLRDAVLGDFRPNLTLYLDVTPEVGLQRARARGELDRIEQESMNFFNRTRARYLELAAA DPSIRTVDATQPLDAVARDIRATIAQWMAEQPA >gi|289776635|gb|GG745509.1| GENE 898 983920 - 984924 1055 334 aa, chain + ## HITS:1 COG:STM1201 KEGG:ns NR:ns ## COG: STM1201 COG0470 # Protein_GI_number: 16764556 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 430 71.0 1e-120 MKWYPWLRPSFEQLVGSYQAGRGHHALLLQSLSGMGGEALIYALCRFLMCRQPEGHKSCG HCHSCQLMQAGTHPDYYPLIPEKGKSALGIDAVRDVNEKLYERARLGGAKVVWISDAALL TDAAANALLKTLEEPPENTWFFLACQEPARLLTTLRSRCRLHHLAPPSESYALAWLEREV NLPQESLLTALRLCASAPAAALELLQEPQWTARQQLCQALAATLASGDWLALLPILNHEQ AAVRLHWLASLLVDAQKRQQGIALVSNPDVWPLLEQLAHSLPAARLQAIAHDVCTCREQL LNVVGVNRELLLTERLLRWEHYLQPGTVLPVSHL >gi|289776635|gb|GG745509.1| GENE 899 984935 - 985729 875 264 aa, chain + ## HITS:1 COG:STM1202 KEGG:ns NR:ns ## COG: STM1202 COG0084 # Protein_GI_number: 16764557 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Salmonella typhimurium LT2 # 1 261 1 261 265 475 90.0 1e-134 MFLVDSHCHLDGLDYQTLHKNVDDVLAKAAARDVKFCLAVATTLPGYRSMRELVGTRDNV VFSCGVHPLNQDEAYEVETLRTLAAEEGVVAMGETGLDYFYTPETKAQQQTSFRDHIRIG RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDMGFYISFSGIV TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPALVRDVAEYMAVLKGVSLE QLAQQTTDNFATLFHIDPARLQPA >gi|289776635|gb|GG745509.1| GENE 900 986026 - 987459 1728 477 aa, chain + ## HITS:1 COG:ptsG_1 KEGG:ns NR:ns ## COG: ptsG_1 COG1263 # Protein_GI_number: 16129064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 395 1 395 397 724 97.0 0 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLG GIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVILSFIWPPIGSAIQ TFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYVIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIV GICYAIVYYVIFRVLIKALDLKTPGREDTTEESKAGATSEMAPALIAAFGGKENITNLDA CITRLRVSVADVAKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNS >gi|289776635|gb|GG745509.1| GENE 901 987721 - 988077 544 118 aa, chain + ## HITS:1 COG:YPO1611 KEGG:ns NR:ns ## COG: YPO1611 COG0537 # Protein_GI_number: 16121879 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Yersinia pestis # 1 117 1 117 117 196 82.0 1e-50 MAEETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIVPNVLIPTVNDVTTEHEL ALGRMMTVAAKIARDEGLADDGYRLIVNCNRHGGQEVYHIHMHLLGGRPLGPMLAHKG >gi|289776635|gb|GG745509.1| GENE 902 988082 - 988456 392 124 aa, chain + ## HITS:1 COG:ycfL KEGG:ns NR:ns ## COG: ycfL COG5633 # Protein_GI_number: 16129067 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli K12 # 17 124 18 125 125 172 75.0 1e-43 MLRTLLGACLAAGLLAGCSSHPEIPVSDQQALVMESSVLAAGISASEPAVVATEIQATAS STLYNERQQPVTVHYRFFWYDARGLEMHPLDAPRTIVVPARSSVTLYGSANILGAHKARL YLYL >gi|289776635|gb|GG745509.1| GENE 903 988469 - 989116 803 215 aa, chain + ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 215 1 213 213 290 78.0 1e-78 MMKMCRYALITALAIFLAGCAGLREQPAPVEEAKPQPQQPAQPQPTVPTVPAVPAVPSQP GPIEHQDQQSGQPAPRVRHYDWNGAVQPLVGQMLQASGVNAGSILLVDSVNNRTNGTLNA GEATTALRNALAGNGKFTLVSAQQLGVAKQQLGLSPQDSLGSRSKAMGIARNVGAQYVLY SNATGNVNAPELKMQLMLVQTGEIIWSGKGAVQQQ >gi|289776635|gb|GG745509.1| GENE 904 989097 - 989924 230 275 aa, chain + ## HITS:1 COG:STM1208 KEGG:ns NR:ns ## COG: STM1208 COG0510 # Protein_GI_number: 16764563 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Salmonella typhimurium LT2 # 4 269 5 270 274 325 64.0 4e-89 MLFSNNKLTRDELLSRFFPRYHPVASLSQNGLSGGSVIISDGDQRHVLRQPHDPSAASCY FRRQYRALRRLPARLAPAPLFYSPCWMVVEYCAGEVKSELPACPMLTNLLYDVHQQPRFG WRVTLAPLLAQYWQTCDPARRTPRWLRWHQRLRRRGEPRPLRLAPLHMDVHAGNIIHSES GLRLIDWEYAGDGDIALELAAVWISPHQRRQLVAAYARRAAIDAQQLWRQVVLWRPWVLL LMAGWYEMRWQQSGDRQFITLADEIWCQLDNERKG >gi|289776635|gb|GG745509.1| GENE 905 989936 - 990958 1087 340 aa, chain + ## HITS:1 COG:ECs1485 KEGG:ns NR:ns ## COG: ECs1485 COG1472 # Protein_GI_number: 15830739 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli O157:H7 # 1 340 1 340 341 605 89.0 1e-173 MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRDASRNHLVVA VDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAAEAGWLMASEMIAMDIDISFAPV LDVGHISAAIGERSYHEDPQKALAIARHFIDGMHAAGMKTTGKHFPGHGAVTADSHKETP FDPRPASVIRDHDMAVFKSLIAEQRLDAIMPAHVIYPELDPCPASGSAYWLKTVLRGELG FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERV TKLYHKGSFSRQELRDSARWKTVSAQLEQLHARWQEAKSA >gi|289776635|gb|GG745509.1| GENE 906 990994 - 991536 779 180 aa, chain + ## HITS:1 COG:ECs1486 KEGG:ns NR:ns ## COG: ECs1486 COG3150 # Protein_GI_number: 15830740 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 180 20 199 199 355 91.0 2e-98 MIIYLHGFDSNSPGNHEKVMQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLTADD RPLICGVGLGGYWAERIGFLCDIRQAVFNPNLFPHENMEGKIDRPEEYADIATKCVTNFR EKNRDRCLVVLSRQDEALDSQRSADLLHHYYEIIWDEEQTHKFKNISPHLQRLKAFKTLG >gi|289776635|gb|GG745509.1| GENE 907 991781 - 993085 1740 434 aa, chain + ## HITS:1 COG:ndh KEGG:ns NR:ns ## COG: ndh COG1252 # Protein_GI_number: 16129072 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Escherichia coli K12 # 1 434 1 434 434 808 93.0 0 MTTPLKKIVIVGGGAGGLELATQLGKKLGRHKKAKITLVDRNHSHLWKPLLHEVATGSLD EGVDALSYLAHARNHGFQFQLGSVVDINREGKTITLGELRNEKGELLVAERKLPYDTLVM ALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGA TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISGAAHNELTKLG VRVLTQTMVTSADAGGLHTKDGEYIEADLMVWAAGIKAPDFMKEIGGLETNRINQLVVEP TLQTTRDADIFAIGDCASCARPEGGFVPPRAQAAHQMATCALNNILAQMKGKPLKAYTYK DHGSLVSLSNYSTVGSLMGNLMRGSMMVEGRIARFVYISLYRMHQIALHGYFKTGLMMLV GRINRIIRPRLKLH >gi|289776635|gb|GG745509.1| GENE 908 993278 - 993817 551 179 aa, chain + ## HITS:1 COG:ycfJ KEGG:ns NR:ns ## COG: ycfJ COG3134 # Protein_GI_number: 16129073 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 179 1 179 179 276 89.0 2e-74 MNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVT HRRPVQDENRIAGSVLGAVAGGVIGHQFGGGRGRSVATVVGALGGGYAGNQLQGAMQDND TYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHNPGSQIPLDNNGQLVLNNKI >gi|289776635|gb|GG745509.1| GENE 909 993875 - 996064 2761 729 aa, chain - ## HITS:1 COG:YPO0994 KEGG:ns NR:ns ## COG: YPO0994 COG1629 # Protein_GI_number: 16121296 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 3 729 4 726 726 1025 70.0 0 MKKRLWVLHPLLLVSSLPALAAQSDEDSIIVSANRTHRTVAEMAQTTWVIEGQEIEQQVQ GGKEFKDVLAQLIPGIDVSSQGRTNYGMNMRGRAIVVLIDGVRLNSSRTDSRQLDAIDPF NIEHIEVISGATSLYGGGSTGGLINIVTKKGQQDRQVDLEVGSKSGFANSNDHDERIAAA VSGGTDHASGRLSVAYQRFGGWYDGNNDALILDNTQTGLQHSDRLDVMGTGTIEIDDNRQ LQLVTQYYKSQGDDDYGLWLGKNMSAVTSGGKAYTTDGLNSDRIPGTERHLISLQYSDAD FFGQNLVSQVYYRDESLTFYPFPTLTKGQVSSFSSSQQDTDQYGAKLTLNSQPLAGWDLT WGLDADHETFNANQMFFDLQQSLASGGLHNESIYTTGRYPGYSISNVAPFLQSSYDLNEI FTVSGGVRYQWTENRVDDFVGYAQQQDIANGKARSADAIKGGKTDYDNFLFNAGIVAHLT ERQQTWFNFSQGVELPDPGKYYGIGKYGAAVNGHLPLISSVNVDDSPLQGIKVNSYELGW RYTGDNLRTQLAAYYSTSDKTIVVNRTDMTIDVQSDKRRIYGVEGAVDYFIPDSDWSVGG NFNVLKSQVQTDGRWQKWDVTLASPSKATAWVGWAPDPWSLRVQSQQVFDLSDAAGNKLE GYNTVDFIGSYALPVGKLTFSIENLLNEDYVTIWGQRAPLLYSPTYGSSSLYEYKGRGRT FGLNYALTF >gi|289776635|gb|GG745509.1| GENE 910 996309 - 996944 799 211 aa, chain - ## HITS:1 COG:ycfQ KEGG:ns NR:ns ## COG: ycfQ COG1309 # Protein_GI_number: 16129074 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 210 27 236 236 321 75.0 8e-88 MTTDVQSCAKKSRGRPKVFDRDAALDKAMTLFWQHGYEATSLADLVEATGAKAPTLYAEF VNKEGLFRAVLDRYISRFAAKHEAVLLAEGKSVDQALRDYFTAVATCFTSKETPAGCFII NTSAALAASSTDIANTIKSRHAMQEQALTQFLQQRQAQGELPAGRDVAPLAQFLNCVLQG MSISAREGADFDKLMQITDTTLRLWPQILES >gi|289776635|gb|GG745509.1| GENE 911 997194 - 997451 289 85 aa, chain + ## HITS:1 COG:no KEGG:KPN_01110 NR:ns ## KEGG: KPN_01110 # Name: ycfR # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 85 1 85 85 119 98.0 5e-26 MKTVNTLAIAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADE MGATSYRITSVTGPNTLHGTAVIYK >gi|289776635|gb|GG745509.1| GENE 912 997580 - 998539 1186 319 aa, chain - ## HITS:1 COG:STM1215 KEGG:ns NR:ns ## COG: STM1215 COG1376 # Protein_GI_number: 16764570 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 319 1 321 321 496 81.0 1e-140 MRNRFPVTLWLALVALVAALALPARANTWPLPPPGSRLVGQNTFHVVQDNGGSLEAIAKK YNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGLVINLAELRLYYYPPGKNE VTVYPIGIGQLGGTTITPTMVTTVSDKRANPTWTPTANIRARYKAMGIELPAVVPAGPDN PMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDNDIKALYNAISPGTKVNIIN TPIKVSVEPDGRRLVEVHQPLSEHIDDDPQTLPITLNATMTEFKQAPQTDGTVMERAMNY RSGMPIDVTRHAAPGPQSL >gi|289776635|gb|GG745509.1| GENE 913 998703 - 1002149 4381 1148 aa, chain - ## HITS:1 COG:STM1216 KEGG:ns NR:ns ## COG: STM1216 COG1197 # Protein_GI_number: 16764571 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Salmonella typhimurium LT2 # 1 1148 1 1148 1148 2103 91.0 0 MPEQYRYSLPAKAGDLRQLGELTGAACATLVAEMAERHKGPVVLVAPDMQNALRLNDEIR QFTDSMVMGLADWETLPYDSFSPHQDIISSRLATLYQLPTMQRGVLIVPVSTLMQRVCPH SFLHGHALVMKKGQSLSRDALRDQLEGAGYRHVDQVMEHGEYATRGALLDLFPMGSDQPY RLDFFDDEIDSLRLFDVDSQRTLEEVAAINLLPAHEFPTDQTAIELFRSQWRDRFEVKRD AEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPASTLIVNTGDLEASAERFQNEAR ARFENRGVDPMRPLLPPELLWLRSDELFGELKKWPRVQLKTERLADKAANTNLGYQTLPD LAVQAQNKAPLDNLRRFLESFTGPVIFSVESEGRREALSEMLARIKIAPKHVLRLEEATG NGRYLMIGAAEHGFIDSQRGLALICESDLLGERVARRRQDSRRTINPDILIRNLAELHIG QPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA PLHKLGGDAWTRARQKAAEKVRDVAAELLDIYAQRAAKAGFAFKHDREQYQLFCDGFPFE TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTL LAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQAAEGKIDILIGTHKLLQSEVKL RDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPP ARRLAVKTFVREYDALVVREAILRETLRGGQVYYLFNDVENIQKAADKLAELVPEARIAI GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG EDQSGQMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV NTRLSFYKRIASAKNELDLEEIKVELIDRFGRLPDAARNLLDIARLRQQAQKLGIRKLES NEKGGVIEFNEKNNVNPVWLIGLLQKQPQHFRLDGPTRLKFMQDLEERKTRMDWVRQFMR QLEENAVA >gi|289776635|gb|GG745509.1| GENE 914 1002454 - 1003653 1388 399 aa, chain + ## HITS:1 COG:STM1217 KEGG:ns NR:ns ## COG: STM1217 COG4591 # Protein_GI_number: 16764572 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Salmonella typhimurium LT2 # 1 399 38 436 436 659 92.0 0 MYQPAALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL GLMPQAILSAKQGSVNPQQLPEREAKLQGVTRVAPITTGDVVLQSARSVAVGVMLGIDPA QNDPLTPYLVNVKQSDLQAGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMGRVPS QRLFTVIGTFAANSEVDGYQMLTNIDDASRLMRYPLGNITGWRLWLDKPLQVDTLSQQTL PPGTQWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGMMVMEKQGEVAIL QTQGLTPRQIMAVFMVQGASAGIVGALLGAVLGALLASQLNNLMPIIGAFLDGAALPVAI EPLQVIVIALVAMVLALLSTLYPSWRAAATQPAEALRYE >gi|289776635|gb|GG745509.1| GENE 915 1003646 - 1004347 197 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 220 7 217 318 80 28 2e-13 MNKILLQCDNLCKRYQEGNVQTDVLHNVSFSIGEGEMMAIVGTSGSGKSTLLHLLGGLDT PTSGDVIFSGQPMSKLSTAARADLRNRELGFIYQFHHLLPDFSALENVAMPLLIGKKKPA DIERQAKAMLQAVGLEHRSHHRPSELSGGERQRVAIARALVNKPRLVLADEPTGNLDARN ADSIFQLLGELNVAQRTAFLVVTHDLQLAKRMSRQLEMRDGRLTADLTLMGAE >gi|289776635|gb|GG745509.1| GENE 916 1004347 - 1005591 1544 414 aa, chain + ## HITS:1 COG:ECs1496 KEGG:ns NR:ns ## COG: ECs1496 COG4591 # Protein_GI_number: 15830750 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 666 87.0 0 MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVL AVVPHGEIEPVNQPWNNWQEALAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP QQETRLSALPTFVQNNAWAGFKAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLL QPKRVRLHVTGILQLSGQLDHSFAMIPMQDAQQYLEMGGSVTGIAIKVTDVFHANKLVRD AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG DIAVLRTLGAKDGLIRAIFVWYGLLAGSVGSLFGVVIGVICALNLTSIINGIEYLIGHKF LSGDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASRIDPARVLSGQ >gi|289776635|gb|GG745509.1| GENE 917 1005640 - 1006551 1081 303 aa, chain + ## HITS:1 COG:ycfX KEGG:ns NR:ns ## COG: ycfX COG1940 # Protein_GI_number: 16129082 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 302 1 302 303 515 82.0 1e-146 MYYGFDIGGSKIALGVFNQERRLQWEKRVATPKSSYEDFLQAVEALVREADERFDQQGSV GIGIPGMPETADGTLYAANVPAASGRPLRTDLSARLGRDVRLDNDANCFALSEAWDDEFT QYPLVMGLILGTGVGGGLVLNGKSITGHSYITGEFGHIRLPVDALEVVGRDFPLLRCGCG QLGCIENYLSGRGFAWLYEHFYQQPLSSPEIVAQWQQHDPRAQAHVERYLDLLAVCLGNI LTIVDPDLLVLGGGLSNFTAISEGLAQRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH LTH >gi|289776635|gb|GG745509.1| GENE 918 1006665 - 1007396 986 243 aa, chain + ## HITS:1 COG:ECs1498 KEGG:ns NR:ns ## COG: ECs1498 COG0846 # Protein_GI_number: 15830752 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Escherichia coli O157:H7 # 3 239 35 271 273 434 87.0 1e-122 MKPEAMAKPRVVVLTGAGISAESGIKTFRAADGLWEEHRVEDVATPEGFARDPALVQAFY NARRRQLQSPEIAPNAAHLALARLEDLLGDHFLLVTQNIDNLHERAGNRRVIHMHGELLK VRCSWSGQVLEWTGDVTAEDKCHCCQFPAALRPHVVWFGEMPLGMDEIYSALADADIFIA IGTSGHVYPAAGFVHEARLHGAHTVELNLEPSQVGSEFAEKHYGLASEVVPAFIDKLLQE NPL >gi|289776635|gb|GG745509.1| GENE 919 1007487 - 1007831 368 114 aa, chain + ## HITS:1 COG:no KEGG:KPN_01118 NR:ns ## KEGG: KPN_01118 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 114 1 114 114 174 92.0 8e-43 MHNPLVIEAIMLIAAIIVGVWSQRALPLHADSRPILFLLCLFVGTGSALCLLLDGLALLF TGQVATGGVRIYGPLLLLVVLWKPLNGISGIIEDFVQRRAEKGKGKGQRDGGRR >gi|289776635|gb|GG745509.1| GENE 920 1007856 - 1008818 1065 320 aa, chain - ## HITS:1 COG:PM1646 KEGG:ns NR:ns ## COG: PM1646 COG2390 # Protein_GI_number: 15603511 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Pasteurella multocida # 1 319 1 317 317 453 68.0 1e-127 MIEQDSDYALLTEIAVAYYDQEQTQEEIAKRFGISRIKVGRLLKKARQEGIVEISVKYHP VFSSQIEQQFISHFGIKRALIALDHHDEDEQRQQVAALVSNYLAGVLKNDMTVTVGQGRN VAAVANHVGVFPERHCRFICGIGGTKRDNQLIDADHISRNLARKFNGFSETLYAPAYVET PELRAAFMQNRLIKATLEQASKADVAIIGLGDMNENSFMVQLGWFTPQEIATARQEQGVV GDLAGYSFFNIQGKPVDTVMNDRVIGLSLEQLRAIPCVIAIASESTKATAILGALRTGVI DVLATSASNARSVINMQKAL >gi|289776635|gb|GG745509.1| GENE 921 1008854 - 1009648 678 264 aa, chain - ## HITS:1 COG:mlr7275 KEGG:ns NR:ns ## COG: mlr7275 COG0149 # Protein_GI_number: 13476061 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mesorhizobium loti # 5 256 6 251 254 210 48.0 2e-54 MTPIWLGTSWKMNKPLSQAMAWCETLAARMPEGCHPAIQPFVIPPFTAIQPVSHFLQMHQ LPLLTGAQNMHEADQGAWTGEISAAMLAETGATLVELGHSERRAAFNESDAAINRKVHSA LGHGLRPLICIGDSAEEKRWQVSRESVVRQMKIALYGLSHQQALQILIAYEPVWAIGEHG TPASPQEAGVIHQALREALCERFGHETGIRIPLLYGGSVTLQNAVELLRQPEINGLFIGR AAWDAQGYCDIVQRVTQEFILQAQ >gi|289776635|gb|GG745509.1| GENE 922 1009891 - 1010898 392 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 1 333 1 330 346 155 31 4e-36 MSAEKKPVVAITIGDPAGIGPEITVATMMDKSVYDECKPFLIGSVPIISRAMKIMGCDFA IHKIAHPQEARFSWGTLDVLETGDYDCDSIEWGKVQKLAGQMSLDYVMKSIELGKAGLID VVSTAPIHKEAIKLAGCKLPGHTEIYQVETQSDYGLTMFHVHNLRVFFVSRHMALKAACD YANKARVLACVQQIHHEFTALNINNPRIAVAALNPHGSDNGLFGHEEADNLIPAVKAAQE MGINAIGPVPADSVFHLGKQGRYDAILSLYHDQGHIACKTLDFERSITITFGLPFMRSSV DHGTAFDIAGTGKAGTVSMLESTLVAARYWKMKHQ >gi|289776635|gb|GG745509.1| GENE 923 1010934 - 1012652 1473 572 aa, chain + ## HITS:1 COG:FN0227 KEGG:ns NR:ns ## COG: FN0227 COG3395 # Protein_GI_number: 19703572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 132 566 6 421 425 204 30.0 3e-52 MEKHLLISKGCKGWGGTLTITLGQGKKIAYITGGIRPPVVDRLSELTGWPSIDVFKNGEP PAEEIGLMVIDCGGTLRCGLYPKRGIPTINLHPTGKSGPLAEFIHEGIYVSGVTPACIEM VWPQGEGGKLGIVADDLTGATTVGVLLARSGLKTAAFFDTESFSRNEVEYPAMVVSSDSR PLPKAEAQHKVSAAVKQLQARGAHYFTKRIDTTLRGGIGFEIDAMLEQLPQETVAVVVPA MPQSRRILVGGYSVIDSVALSRTDVARDVRTPVTESWVPGLLAAQTHHQVGHIALTSVMK GEGQIQQDLQEQQQRGVRVIVVDAITVDDVDAIAGAVVALNWNVLAVDPGPFTERLAVRR GLMREARSSAPASLTADGQRGSILIVAGSATPVTKKQLQYLIARDDRVCHIPVDAELLVD RKNAAEIEVNRVVQHARQCVPAQHNALFVFESALTGRLLNLQEEEQRFGLAHGEAAQNIN HGLGSIVREVLNCASGEIKGLYMTGGDTMVNVLKELGATGIEMIDYVIPQTDMVRIIGGD YAGLICVGKGGLTGPEDIIGIIVDRIYQEAQQ >gi|289776635|gb|GG745509.1| GENE 924 1012745 - 1013764 1141 339 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3257 NR:ns ## KEGG: Kvar_3257 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: K.variicola # Pathway: not_defined # 1 339 1 339 339 551 100.0 1e-155 MNINILEKMNKVPGGLIIIPLLVAILINTFAPQVLSIGGPTTALFKVGSSAMMGIFLLIC GTSINIRQAGLPLYKGAVLLFLKCLAGALAVWAAGTLFGPSGFLGISTLALIACLTSSNS SLYIALCSNYGDASDAGAISVFCIKDGPFVTMMVLGVSGLANIPFAALLSMLIPLLIGML WGNLDERFKQLCAAAQPLVIIIMSFAIGANSSINTVFTAGLSGILLGIISALTGIVFYFI YNLFLKKKSALGAALGTTAASSALTPAMVAQADPSLAMYVDAATAQLATASIITMITAPI LVAWFDKRLKKRAPAAEPLKDAKSEESVTLSSPAAKGHK >gi|289776635|gb|GG745509.1| GENE 925 1013766 - 1014140 126 124 aa, chain + ## HITS:1 COG:STM2834 KEGG:ns NR:ns ## COG: STM2834 COG3731 # Protein_GI_number: 16766140 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 119 1 118 120 107 49.0 4e-24 MSVPLYSLRITAVGEYVECSLREQRLILFSDAVPDDIASYCAVHQASELTAELSPGQRMK LNDKNYRVTAVGRVATANLRQLGHITLNFDGADIAELPGTVHLYGEPPQIIQPGDQISFY PNCH >gi|289776635|gb|GG745509.1| GENE 926 1014169 - 1014627 636 152 aa, chain + ## HITS:1 COG:YPO3353 KEGG:ns NR:ns ## COG: YPO3353 COG0698 # Protein_GI_number: 16123503 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 1 147 1 147 151 198 68.0 3e-51 MKTIAIGADDAAYAFRDTIVAYLNGLGINVADYSSDKRQGSTVYPDVAHAVAMSIKQGEH ERGILICGTGIGMSIVANKVPGVRAAQCHDTFSAERARKSNNAQIITLGARVIGTELGKK IIQAWLESEYEGGGSAPKVERIDYYEHQHARD >gi|289776635|gb|GG745509.1| GENE 927 1014658 - 1015608 1200 316 aa, chain + ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 309 1 309 316 414 65.0 1e-115 MSQLDELKKYTTVVADTGDIESIKKFAPQDATTNPSLVLKATQLPQYQPLIADAIGKARR QGGSAETQLINACDQVAVDIGSEVLRHVPGRISTEVDARFAWDRGMCVAKARKLIQLYEK NGIGPERILIKLAATWEGIRAAEELEQSGINCNLTLLFSFAQARACAEAGVFLISPFVGR IYDWYQKHQPQSAYQVDSDPGVVSVRQIYQYYKSHGYDTVVMGASFRRIEQIKALAGCDR LTISPALLDELAASEGVLTRQLTPGCVTETRPSPMTQAEFLWQHHQDPMAVEKLAEGIRL FAVDQVKLEQQIQQML >gi|289776635|gb|GG745509.1| GENE 928 1015848 - 1016321 631 157 aa, chain + ## HITS:1 COG:tktA KEGG:ns NR:ns ## COG: tktA COG0021 # Protein_GI_number: 16130836 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli K12 # 1 156 16 171 663 327 97.0 5e-90 MDAVQKAKSGHPGAPMGMADIAEVLWRDFLNHNPNNPAWADRDRFVLSNGHGSMLIYSLL HLTGYDLPIEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAA QFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGL >gi|289776635|gb|GG745509.1| GENE 929 1016336 - 1017793 2003 485 aa, chain + ## HITS:1 COG:STM3076 KEGG:ns NR:ns ## COG: STM3076 COG0021 # Protein_GI_number: 16766377 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Salmonella typhimurium LT2 # 1 485 179 663 663 926 94.0 0 MAFYDDNGISIDGHVEGWFTDDTAKRFEAYGWHVVRGVDGHDADAIKRAVEEARAVTDKP SLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREALGWKHAPFDIPSDIYAQWDAKE AGQAKEAAWNEKFAAYAKAFPQEAAEFTRRMKGEMPSDFDAKANEFIAKLQANPAKIASR KASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKPINEDTAGNYIHYGVREFGMTAIA NGIALHGGFLPYISTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQ VASLRVTPNMSTWRPCDQVESAIAWKYGVERQDGPTALILSRQNLAQQERTAEQLANVAR GGYVLKDCAGQPELIFIATGSEVELAVAAWDKLTAEGVKARVVSMPSTDAFDKQDAAYRE SVLPKAVSARVAVEAGIADYWFKYVGLNGAIVGMTTFGESAPAEQLFEEFGFTVDNVVAK AKALL >gi|289776635|gb|GG745509.1| GENE 930 1018735 - 1020024 1197 429 aa, chain + ## HITS:1 COG:RSc1749 KEGG:ns NR:ns ## COG: RSc1749 COG0318 # Protein_GI_number: 17546468 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Ralstonia solanacearum # 2 420 117 532 542 432 49.0 1e-121 MLFFDQTFLPLVAQLLPRLPTVKHIVLMEPRSEAALSQLPSLLFFDDLLQQGTVDYRWPQ LNELTPASLCYTSGTTGRPKGVLNTHRSLVLHALSGNQPDAAGISAKDSLLPVVPMFHVN AWGTPFIAAMVGARLVLPGPHLDGDSLLQLLAAEKVTVGFGVPVIWAGLLAAMRRTDVRL PEFKRALVGGSALPPSMAEAFQRDYGIELTHAWGMTETSPIGTINTPLSKHDALPAQEQQ KQRAGQGRPIFGIELQVVDVDGEPLPRDGQSQGYLQVRGHWVVEQYYGQDASALTAGGWF DTGDIGTLDANGYLVICDRAKDIIKSGGEWISTVELENIAIAHPAVRSAAAIAARHPRWD ERPVLLCVRAEGGEVEETDLLTWFETRVPKWQIPDRVIFVDALPVSATGKVLKNQLRQAY GEILMSEGK >gi|289776635|gb|GG745509.1| GENE 931 1020021 - 1021745 1737 574 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3251 NR:ns ## KEGG: Kvar_3251 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 574 1 574 574 1104 99.0 0 MSHARPGLTTCSQYDAALYALSAARQRWAETSVNRRLALLRQIKDALAGIAPAWVAAAAA AKGLPAGDPLAGEEWLAGPCALMVGCNGLIATLEQLEEKTFLRRIPLRTLADGRLALRVV PGTLWDRLLLSGVRAEIWMQPGVTRAHLDRYAARAYDIPPAARQGKLALVLGAGNVASIA PLDVLHKLFIENQVCLLKLNPVNDYLHDLLAQALAPLIAMDALRIVTGDAQAGAWLTSHP AVDEIHITGSRETHDVIVWGDGEAARQRRAARTPLNPRRVTSELGGISPTIIVPGPWSEA DIAFQAQQLATQKMNNGGFNCVASQVLILQQGWEPATGLLNQLYRLIAANTRPDYYPGAE KRLTDFRLRARQPLEIARGDALPLIVANTDDDPALCQQEVFGPGLSVTRLEADSAESFLR QAIGYANQRLQGTLGANIVIHPRTRKAIGRKRFNALIAELRYGTVAINCWSGVAFLLAPC PWGAFPGHTLDDIQSGRGKVHNSFMLEKTERTVIEAPFRPFPRSLWHGELTLMPLPPWFI THRGQEAVAQKLVDFYHRPRWRKLPAILWRALRG >gi|289776635|gb|GG745509.1| GENE 932 1021790 - 1022836 1657 348 aa, chain - ## HITS:1 COG:STM1222 KEGG:ns NR:ns ## COG: STM1222 COG0687 # Protein_GI_number: 16764577 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Salmonella typhimurium LT2 # 1 348 1 348 348 620 93.0 1e-177 MKKWSRHLLAAGALAIGMSAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE SNETMYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLTNFSNLDPQMLNKPFD PNNDYSIPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKSSLLLTDDAREVFQMALRKL GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAYVARQAG TPLEVIWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPDVAKQVAETIGYPTPNLAA RKMLSPAVANDKSLYPDAATIEKGEWQNDVGSASAIYEEYYQKLKAGR >gi|289776635|gb|GG745509.1| GENE 933 1022833 - 1023618 1075 261 aa, chain - ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 258 1 258 264 406 96.0 1e-113 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNRSRFGINWQGFTTDWYSLLMNNDSLLQAA QHSLTMAVLSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LIGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEMTILRKIILPL ALPAVAAGWLLSFTLSMDDVVVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATILLVL SLVMVIASQLIARDKTQGTLR >gi|289776635|gb|GG745509.1| GENE 934 1023615 - 1024472 1501 285 aa, chain - ## HITS:1 COG:STM1225 KEGG:ns NR:ns ## COG: STM1225 COG1176 # Protein_GI_number: 16764580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Salmonella typhimurium LT2 # 1 282 1 282 287 448 92.0 1e-126 MKNSSKFQNVVIATIVGWLVLFVFLPNLMIIATSFLTRDDANFVKLVFTLDNYSRLLDPL YYDVLLHSLNMALLATLACLALGYPFAWFLARLPQKVRPLLLFLLIVPFWTNSLIRIYGL KIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDRPL LEAAKDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVI KSQFLNIRDWPFGAATSITLTLVMGLMLLIYWRAARLLNKKVELE >gi|289776635|gb|GG745509.1| GENE 935 1024456 - 1025574 288 372 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 12 301 5 299 305 115 27 5e-24 MNIQPRSRSPLVQLAGIRKSFDGKTVIDNLNLTINNGEFLTLLGPSGCGKTTVLRLIAGL ENVDSGRIHLEDHDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP RVLDALKMVQLEDFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQM QNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGKIEQDGTPREIYEEPKNLFVAS FIGEINIFDATVIERLDEQRVRASVEGRECNITVNFAVEAGQRLHVLLRPEDLRVDEIHH NSDADGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMSINWVE SWEVVLADEELQ >gi|289776635|gb|GG745509.1| GENE 936 1025850 - 1027082 1678 410 aa, chain + ## HITS:1 COG:ECs1572 KEGG:ns NR:ns ## COG: ECs1572 COG2195 # Protein_GI_number: 15830826 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 408 1 408 408 771 91.0 0 MDKLLERFLQYVSLDTQSKPGVRQVPSTEGQWKLLRLLQAQLEEMGLVKVTLSEKGTVMG TLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIMTALATLQAKNIPHGDIRVAFTPDEEVGKGAK HFDVEAFDARWAYTVDGGGVGELEFENFNAASVTIKIVGNNVHPGTAKGVMVNALSLAAR IHAEVPADEAPETTEGYEGFYHLTSIKGSVDRAEMHYIIRDFDRKHFEARKRKMMEIAKK VGKGLHPDCYIELVIEDSYYNMHEQVIAHPHVVDIARQAMVDCDIEPQMKPIRGGTDGAQ LSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTATRKGK >gi|289776635|gb|GG745509.1| GENE 937 1027249 - 1027740 371 163 aa, chain + ## HITS:1 COG:yafM KEGG:ns NR:ns ## COG: yafM COG1943 # Protein_GI_number: 16128214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 162 1 162 165 224 69.0 6e-59 MSDYRRSYIPGGCWFFTVNLQNRHSDLLTRHIAHLRAATAFVKSKKPFLINAWVVLPEHM HCIWTLPEGDTDYSGRWRDIKKMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINP VKHGHVRRVQDWPYSTFHRDVRRAWYPPDWAGEVSEFDAGERR >gi|289776635|gb|GG745509.1| GENE 938 1027996 - 1029117 1389 373 aa, chain - ## HITS:1 COG:ECs1573 KEGG:ns NR:ns ## COG: ECs1573 COG2850 # Protein_GI_number: 15830827 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 371 4 374 376 667 87.0 0 MDYQLTLNWPDFIERYWQKRPVVLKRGFANFIDPLSPDELAGLAMESEVDSRLVSHQDGK WQVSHGPFESYDHLSENNWSLLVQAVNHWHEPSAALMHPFRALPDWRIDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKVPMKQHCPHPDLLQVDPFEAIIDEEMEPGDILY IPPGFPHEGYSLENSLNYSVGYRAPNARELFSGFADYVLQRELGSQRYADPDVPPRDHPA DILPVELDRLREMMLGLINQPEHFKQWFGEFITQSRHELDVAPPEPPYQPDEIYDALQQG DTLERLGGMRVLRIDGEVFVNGEKINSPHRPALDALATHLTLRADHFGDALEDPSFLAML AALVNSGYWFFGD >gi|289776635|gb|GG745509.1| GENE 939 1029203 - 1030669 2136 488 aa, chain - ## HITS:1 COG:STM1230 KEGG:ns NR:ns ## COG: STM1230 COG0642 # Protein_GI_number: 16764585 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 481 1 480 487 803 81.0 0 MKGLLRHIFPLSLRVRFLLATAGVVLVLSLAYGMVALVGYSVSFDKTTFRLLRGESNLFY MLAKWENGAIDVDIPENLNMESPTVTLIYDERGKLLWAQRDVPWLAKRIQPEWLKRNGFH EIEADVDSSSMLLRNNHEIQEQLDAIREQGDDSEMTHSVAINLYPATSKMPQLSIVVVDT IPVELKRSYMVWSWFIYVLAANLLLVIPLLWVAAWWSLRPIESLAKEVRELEEHHREKLN PNTTRELTRLVSNLNRLVRSERERYDKYRTTLTDLTHSLKTPLAVMQSTLRSLRGEKISV DEAEPVMLEQISRISQQIGYYLHRASMRSGGTLLSRELHPIAPLLDSLTSALNKVYQRKG VNISLDISPEITFVGEQNDFMEVMGNVLDNACKYCLEFVEVSVRQTTDSHLHILVEDDGP GIPQSQRRAVFDRGQRADTLRPGQGVGLSVAREIVEQYDGEIIASESLLGGACMEVVFGR QLMEDKQG >gi|289776635|gb|GG745509.1| GENE 940 1030669 - 1031340 1147 223 aa, chain - ## HITS:1 COG:STM1231 KEGG:ns NR:ns ## COG: STM1231 COG0745 # Protein_GI_number: 16764586 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 223 2 224 224 393 93.0 1e-109 MRVLVVEDNALLRHHLKVQLQELGHQVDAAEDAREADYYLGEHLPDIAIVDLGLPDEDGL SLIRRWRSHDVSLPVLVLTAREGWQDKVEVLSAGADDYVTKPFHIEEVAARMQALLRRNS GLASQVISLPPFQVDLSRRELSVNDQPIKLTAFEYTIMETLIRNRGKVVSKDSLMLQLYP DAELRESHTIDVLMGRLRKKIQAEYPQDVITTVRGQGYLFELR >gi|289776635|gb|GG745509.1| GENE 941 1031624 - 1032430 742 268 aa, chain + ## HITS:1 COG:PA2489 KEGG:ns NR:ns ## COG: PA2489 COG2207 # Protein_GI_number: 15597685 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 8 266 9 268 271 305 62.0 5e-83 MSQQKSADWVRLAQSPSQTERIEAFFGGHGYEPHRHDTYAIGQTIAGVQSFHYRGGLQHS LPGGTMVLHPDEIHDGEAGTEAGFHYRMVYIEPALIQKILGGRPLPFIPGGLSADPRLRC AAQPLLKAVTDTFEPLEEEDALYDLAQTLAVVGGQRSRRQAFDYQAAERAREYIHACFMQ DMTLDTLSQVSGRDRWSLSRDFRTLYGTSPWRYVMMRRLDFCRQRMRAGERLVDIAADAG FADQSHMTRQFISRFGLSPGRWLRAIRG >gi|289776635|gb|GG745509.1| GENE 942 1032514 - 1032876 586 120 aa, chain + ## HITS:1 COG:PA2490 KEGG:ns NR:ns ## COG: PA2490 COG0662 # Protein_GI_number: 15597686 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Pseudomonas aeruginosa # 3 120 7 124 124 167 61.0 4e-42 MYQLVNLAQKFSLFSEQWQPKVVAEMNDYQFKIVRIAGDFIWHSHPETDETLMVVEGVLR VDFRDGHVLVKAGEMIVVPCGMEHKTSAETEAKLMLIEPRGVLNTGHEGGERTAVNDVWI >gi|289776635|gb|GG745509.1| GENE 943 1032931 - 1034301 1902 456 aa, chain - ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 887 93.0 0 MELSSLTAVSPVDGRYGDKVSALRGIFSEFGLLKFRVQVEVRWLQKLAAHAAIKEVPAFA ADANGFLDKIVADFSVEDAERIKTIERTTNHDVKAVEYFLKEKVADVAELHAVSEFIHFA CTSEDINNLSHALMLKTARDEVVLPYWRKLIDAVKDLATQYRDVPLLSRTHGQPATPSTM GKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLANAVMQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQST LKGISKLELNQDRLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAGGMK QFIDSLALPEEEKVRLKAMTPANYIGRATTMVDELK >gi|289776635|gb|GG745509.1| GENE 944 1034305 - 1034946 738 213 aa, chain - ## HITS:1 COG:ycfC KEGG:ns NR:ns ## COG: ycfC COG2915 # Protein_GI_number: 16129095 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Escherichia coli K12 # 1 213 1 213 213 356 90.0 1e-98 MAKNYYDITLALAGVCQAARLVQQLAHQGHCDSDALHVSLNSIIDLDPESTLAVFGGSEA NLRLGLETLLGVLNTSSRQGLNAELTRYTLSLMVLERKLAASKGAMDTLGNRIAGLHRQL EHFDLQSETLLSAMAGIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRSALLAGIRAAVL WHQVGGGRLQLMFSRNRLVNQAKQILAHLTPEL >gi|289776635|gb|GG745509.1| GENE 945 1035001 - 1036107 1714 368 aa, chain - ## HITS:1 COG:STM1234 KEGG:ns NR:ns ## COG: STM1234 COG0482 # Protein_GI_number: 16764589 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Salmonella typhimurium LT2 # 1 366 16 381 383 699 93.0 0 MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYCTAAADLADAQA VCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG ADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK IAEELDLITAKKKDSTGICFIGERKFRDFLGRYLPAQPGKILTVDGEEIGTHQGLMYHTL GQRKGLGIGGTKEGSEDPWYVVDKDVENNILIVAQGHDHPRLMSVGLIAQQLHWVDREPL QGTLRCTVKTRYRQTDIPCTVTALDEDRIEVRFDEPVAAVTPGQSAVFYLGEVCLGGGII EQRLPLQS >gi|289776635|gb|GG745509.1| GENE 946 1036164 - 1036622 560 152 aa, chain - ## HITS:1 COG:STM1235 KEGG:ns NR:ns ## COG: STM1235 COG0494 # Protein_GI_number: 16764590 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 151 1 151 153 255 78.0 3e-68 MFKPHVTVACVVHAEDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRA TPQHFIRMHQWVAPDNTPFLRFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRS PLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE >gi|289776635|gb|GG745509.1| GENE 947 1036639 - 1037259 706 206 aa, chain - ## HITS:1 COG:ECs1607 KEGG:ns NR:ns ## COG: ECs1607 COG1187 # Protein_GI_number: 15830861 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 205 11 215 217 347 85.0 6e-96 MQKTSFRKHRVERFSTQQVTRQRKERQPKTVILFNKPYDVLPQFTDEAGRSTLKDFIPVA GVYAAGRLDRDSEGLLVLTNDGALQAKLTQPGKRTGKIYYVQVEGEPTAEALAALRNGVT LNDGPTLPAGVEVVEEPAWLWPRNPPIRERKSIPTCWLKITLYEGRNRQVRRMTAHVGFP TLRLIRYAMGGYTLDGLANGEWRRAE >gi|289776635|gb|GG745509.1| GENE 948 1037530 - 1038780 1749 416 aa, chain + ## HITS:1 COG:STM1238 KEGG:ns NR:ns ## COG: STM1238 COG0538 # Protein_GI_number: 16764593 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 416 1 416 416 835 97.0 0 MESKVVVPAEGQKITLQNGKLNVPHNPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGE RKISWMEVYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQ ELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSAEADKVIKFLR DEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSLTLVHKGNIMKFTEGA FKDWGYQLAREEFGGELIDGGPWVKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIA CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA EMMLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIIANM >gi|289776635|gb|GG745509.1| GENE 949 1038893 - 1039381 -23 162 aa, chain - ## HITS:1 COG:ECs1609 KEGG:ns NR:ns ## COG: ECs1609 COG0582 # Protein_GI_number: 15830863 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 160 219 378 380 268 80.0 5e-72 MLLAIVTGQRLGDICNMKFSDVWDDMLHIEQEKTGTRLAIPLSLRNEALNITLSDVISKC RDAVVSKYLVHFRHSTSQASRGDQVSAKTLTSTFKKARDKSGLTWEEGTAPTFHEQRSLS ERLYREQGIDTQKLLGHKTMKMTDRYNDDRGKEWIVVGKKAV >gi|289776635|gb|GG745509.1| GENE 950 1040668 - 1040919 231 83 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1775 NR:ns ## KEGG: Kvar_1775 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 81 7 87 89 117 71.0 1e-25 MILQYLWCNETGGGIEYTSDCVKFDKRDKAIRHGFKLRESDDFNIGVIEGGKLISFDWMD KPVGESEDTLAQIAELISPEDTE >gi|289776635|gb|GG745509.1| GENE 951 1040934 - 1041398 371 154 aa, chain - ## HITS:1 COG:no KEGG:KPK_4168 NR:ns ## KEGG: KPK_4168 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 109 3 123 177 65 38.0 9e-10 MNIETVNELIASLESAGELSIREQKFLKLAKAYVQLAAENMSMIRLLTDISDNHVEYFSE GEGTMFAGVPLDYVSEINMYVSRDVNAENPVPATDRIYAGIKADGVEEMASTYRGFANKD GCSVNMKCSYNLTAERAESYAAYIRHQMREGADK >gi|289776635|gb|GG745509.1| GENE 952 1041526 - 1042311 534 261 aa, chain - ## HITS:1 COG:no KEGG:KP1_2152 NR:ns ## KEGG: KP1_2152 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 260 1 260 261 381 80.0 1e-104 MAKDSKVVYGASGKTNVLAFEPEKLHLVIDKTHPLYDERIHLPISEAMVLNIMDQGVLEP IIVWKDPETGLSCVVDGRQRVRHTLEANKRLTKEGKEPLLVPAVAKRGSAIRMAQAMVSA NEIRQADTPLGRAKKMADALERGHDEDDLALMFGVSVQTVRATLSLLDATQAVRDAVESG TVTVTQARQLGALPPEEQRTKVAEIELATAGTKGHEKARRQRQILGEAKPRIKSRKEIAK ALEDASGEYAEALRWVLGEAQ >gi|289776635|gb|GG745509.1| GENE 953 1042504 - 1043031 321 175 aa, chain - ## HITS:1 COG:yfdR KEGG:ns NR:ns ## COG: yfdR COG1896 # Protein_GI_number: 16130293 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli K12 # 1 175 10 184 187 229 64.0 3e-60 MSFIQTLSGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLSSLLVPQ EFALEALLHDAAEAYLQDIPAPLKHLLPDYCAMEIRVDSAIRQKFDLPAEQHPTVKYADL VMLASERRDFEIDDGTVWPMLEGIIPTDQFVINPVRPGQAYGMFMNRFHQLMERR >gi|289776635|gb|GG745509.1| GENE 954 1043169 - 1043999 673 276 aa, chain - ## HITS:1 COG:yfdQ KEGG:ns NR:ns ## COG: yfdQ COG5532 # Protein_GI_number: 16130292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 276 1 274 274 313 57.0 2e-85 MSQQLDGSAIKQVQDLVLSGYYMEDIQRLACPTAVLPAGTGIESLERFSSERFRFRGAME TTSIDDFVRYSSGYAKEDEKARCFIDADNMLARSIFNIGTLDNPGHADNVASIKLKKTAP FRALLSINGDHLNQKQIAEWLEDWSDYLIAFDADGNTMKIAQAAQAVRRVTIQQTNASDH EDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERTFSLRNSLLKSNDPVFVLRI VQLEAKEEAIANEFRDLLIGKFDGKPVEAFIGTFKA >gi|289776635|gb|GG745509.1| GENE 955 1044052 - 1044372 419 106 aa, chain - ## HITS:1 COG:no KEGG:EpC_20790 NR:ns ## KEGG: EpC_20790 # Name: not_defined # Def: hypothetical protein # Organism: E.pyrifoliae # Pathway: not_defined # 1 97 1 97 123 160 84.0 1e-38 MSNDRMTNVSDFLGELDAGVFINKIAGALNTAALGVLNNGSKGKVVLTFDIDRMGNSIEE KRVMIKHKLQYITPTPRGKVSEEDTTETPMFVNRGGKPDAKLRTAP >gi|289776635|gb|GG745509.1| GENE 956 1045301 - 1045774 -113 157 aa, chain + ## HITS:1 COG:no KEGG:KP1_2158 NR:ns ## KEGG: KP1_2158 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 151 1 150 161 114 41.0 1e-24 MSRHDLIFDIHYSHYLEKMFATLTGRIDRLMTFLIILSGCGVFVSITGYVWFGAFIAALS VSQVVYQFSRSSGIATEQARLYLELITDEPSLTDEELLARFKHLQNADSKPWGCLELPAQ KRATIVLGLTDTTRELSKQEVFAARLAGDLPRKNPHG >gi|289776635|gb|GG745509.1| GENE 957 1046067 - 1046573 -49 168 aa, chain - ## HITS:1 COG:ymfK KEGG:ns NR:ns ## COG: ymfK COG1974 # Protein_GI_number: 16129108 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli K12 # 1 168 52 219 224 318 86.0 4e-87 MARHIEKCFDLPMGWLDQEHQTTNVAKSPDVSDTNRNFVMVPVISWVQAGAWTEFGYAEV DLNSTENYPCPVPCGPMTYILRVIGDSMIDEYRPGDMIFVDPEVPAVHGDDVIALMHDSG ETTFKRLIEDAGQRYLKALNTNWPEPYIKINGNCSIIGTVIFSGKPRR >gi|289776635|gb|GG745509.1| GENE 958 1046814 - 1047014 244 66 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2907 NR:ns ## KEGG: ECS88_2907 # Name: not_defined # Def: DNA-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 65 102 166 167 107 80.0 2e-22 MKEFWDSLTKEQQSTLAASVGSTPGYLRLVFNGYKKAGFNLAKKLENITSGQITKYDLRP DIYSKQ >gi|289776635|gb|GG745509.1| GENE 959 1047059 - 1047610 111 183 aa, chain + ## HITS:1 COG:no KEGG:KP1_2161 NR:ns ## KEGG: KP1_2161 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 4 183 21 200 200 355 98.0 4e-97 MGIEPEWKVDKQPAWLVAAIKKTITDLDGGYEEAAEWLGVTENALFNRLRSDGDQIFPIG WAMVLQRAGGSNHIANAIARHSNGVFVPLADIEEVDNADINQRLMESIEWIGKHSQYLRK ATADGVIDQAEREQIEENSYQVMAKWQEHLTLLFRVFCQPEKSDARECAAPGVVADKSTC MEK >gi|289776635|gb|GG745509.1| GENE 960 1047783 - 1047962 117 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|324112042|gb|EGC06020.1| ## NR: gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 [Escherichia fergusonii B253] # 1 59 15 73 73 84 76.0 2e-15 MREVNRKFRDHYGKPVRVIRWERETNRVIYLREGYPHECFSPLDQFQRKFREVEGSHEQ >gi|289776635|gb|GG745509.1| GENE 961 1047952 - 1048878 224 308 aa, chain + ## HITS:1 COG:no KEGG:KP1_2163 NR:ns ## KEGG: KP1_2163 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 308 1 303 303 578 97.0 1e-164 MSSKLHGLVWEACAFKGLIISEIAVMARLADFSNDEGISWPAVTTIQRQIGAKSENTVRS AIKKLQAKGWLKKQERRVGGKNNSNVYKLNVDMLERAAAEAKLFYATPREQSKFDASEIE GSKFEGSKFEGSNSDASNNGSASPQILRGDPSMVEGDPSLDPSLDPSSKKPSCRAPAEPD DKPDPEVVITDHAIEVLMHLNQVSGSRFQKSKNSLENIRARLREGHTVPDLKLVIDVKHE HWHGNDEQYQYMRPETLFGPKKFEGYLQSAIRWDAKGRPPRECWDRSKPRDINQIGAVQT TIPKGFRG >gi|289776635|gb|GG745509.1| GENE 962 1048875 - 1049333 92 152 aa, chain + ## HITS:1 COG:no KEGG:KP1_2164 NR:ns ## KEGG: KP1_2164 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 152 1 152 152 293 98.0 2e-78 MNITQMAFEFIAKNPDQKMRDIIAAFPDCKPVSVKSAVYRLYTEGRLETKATSCGFIYRV INDASCCDDLQDDFKSRGNLEQEKAAKKLEERSLYRRAATVWHQLSTSSCSQKTLEYYIR QKNACLRKARMGKSHTECLLAGNYCGGDLCID >gi|289776635|gb|GG745509.1| GENE 963 1049501 - 1050703 196 400 aa, chain + ## HITS:1 COG:no KEGG:KP1_2165 NR:ns ## KEGG: KP1_2165 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 400 61 460 460 780 98.0 0 MYGPLVLDLFADESNAKCPAWYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQA ITGMTHIMSYASAQREKGGRYVFLVKSATSETWWPEDADHVCFIRGRIGFDLPTWFKPAD DKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMYQ PQTEQAETEIPLLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEF TSVKSETIATAQSLIIKQTAKQVLVGWLNGVDLGSATAREETIERMNSVYAEFIDTCPVT EFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRIWPLEVGLVFERVEGANHLNE SQQNKLKAHINQLWLERTPSTEIITIASGLVSSMQGVSHA >gi|289776635|gb|GG745509.1| GENE 964 1051779 - 1052546 148 255 aa, chain + ## HITS:1 COG:mlr8517 KEGG:ns NR:ns ## COG: mlr8517 COG0270 # Protein_GI_number: 13477024 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Mesorhizobium loti # 19 243 431 658 667 117 36.0 2e-26 MVAPVIVRQFGASIGHRADEPSATITAGGGGKSQLVTATLIQMGYGERVGQSPRVLNLGK PLGTVTAGGNKFAVTTAFLAKHYGGNYTGPGVALDKPAHSVTTVDHHALVTSHLVKLRGT CRDGQRTDEPMPTITAGGQHVGEVSALLAANDYDERRADQVKEFLNSFGVSELVTIKGIV YRIVDIGMRMLQPHELYRAQGFPEWYIIDQDYRGVKYAKDKQVARCGNAVPPPFAEALVR ANLPELCVNREEFAA >gi|289776635|gb|GG745509.1| GENE 965 1052543 - 1053019 193 158 aa, chain + ## HITS:1 COG:PA3007 KEGG:ns NR:ns ## COG: PA3007 COG1974 # Protein_GI_number: 15598203 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Pseudomonas aeruginosa # 1 72 1 71 204 77 56.0 1e-14 MMKLTIRQQEVLNLLFEYQRVHGFPPTTYELTGMLGCRSPNAAASHLKALERKGAITITR GVSRGISITPSFSRKELVVNLNSNVKVKLNEVSLNHLEKQHEENRIRYPGIFGEFVPLAT DENGYSSMTLWRLMSDLGQLCYCGGEIPFELKLILEDE >gi|289776635|gb|GG745509.1| GENE 966 1053016 - 1053414 73 132 aa, chain + ## HITS:1 COG:ECs2751 KEGG:ns NR:ns ## COG: ECs2751 COG4570 # Protein_GI_number: 15832005 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 119 3 114 119 82 42.0 1e-16 MKFILPFPPSVNSYWRSPNKGTAKGKLLVSEAGRNFKHAVRAAIIEQLKAVPKPSASPAE VVIVLHPPDYRRRDLDNYNKALFDALTYAGIWEDDSQVKRMTIEWGENAKGGRVEITITA FNKVLDVCSVVG >gi|289776635|gb|GG745509.1| GENE 967 1053777 - 1054325 -43 182 aa, chain + ## HITS:1 COG:no KEGG:KP1_2169 NR:ns ## KEGG: KP1_2169 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 182 128 309 309 351 97.0 8e-96 MYAYAMWISAAFNLKVIRTFDAVQNTMTALTSDRIQAGVILLESASRTLNLSNSSKLGAY QKLQQAAGLPDLMPAYAIDAPAGAMDGSSRPTLSLSALLKTHGIRLTANQAYHLMARAGI VDQKERQSRSGLNGVKKFWSVTAKGCLYGKNITSPANPRETQPHFFESKFPELLRLLGIV TQ >gi|289776635|gb|GG745509.1| GENE 968 1055217 - 1055393 153 58 aa, chain + ## HITS:1 COG:no KEGG:KP1_2170 NR:ns ## KEGG: KP1_2170 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 58 297 354 354 126 100.0 3e-28 MGGTATKAHDLFVIPLCRAHHDELHANLIAFEEKYGSQLELLIRFLDRALGIGVIFKE >gi|289776635|gb|GG745509.1| GENE 969 1055412 - 1056242 107 276 aa, chain + ## HITS:1 COG:no KEGG:KP1_2171 NR:ns ## KEGG: KP1_2171 # Name: not_defined # Def: putative prophage antitermination protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 276 1 276 276 550 98.0 1e-155 MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGIGLSMFLGKAGISE NDRMASIHWLAEYAKKNAPRSVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAG KGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQEVDLVLCVKCHGTGKISKRC QCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILPELPGLPERTWRYS WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA >gi|289776635|gb|GG745509.1| GENE 970 1056446 - 1057243 -63 265 aa, chain - ## HITS:1 COG:no KEGG:KP1_2172 NR:ns ## KEGG: KP1_2172 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 265 13 277 277 548 100.0 1e-155 MADMDNPGKLIWHVSCDESGTGGQRFYGFGSLWMKYQRRGDFVQMIRELREKHNCTDELK WQKAHSKQNAAFYDDVIEAFFKHQWLAFHCIIIQKAHVNKEFHDGDYDLAMRKHFTELLT KKIIRVIRKFPHRECEFRIDVDPIASRYDKADEAFHKIANNIIKNATGKEEAIKTVITKD SKESAQIQICDFLLGAVMSAYQDKASNPRKIAVANKIASYLGWDGFHYDTWGTERKFNIW YFYDPTKGPRELQTRKVTLKYPLPE >gi|289776635|gb|GG745509.1| GENE 971 1057541 - 1058371 789 276 aa, chain + ## HITS:1 COG:no KEGG:KP1_2173 NR:ns ## KEGG: KP1_2173 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 276 32 307 307 506 97.0 1e-142 MTAIVVASLCLSNAASAAEVVITTGQQGLTYNAVYGVNLASALSEYGYSSTVTPSKGSLD NLDKVASGTAQIGFTQADAFQFWRSRHSNEAQKVDIIGELADECVFVAVKKGGKISDEGD LKAGVKIAVGEPTSGSYASWQYLQGLEKDYAKVETYAKGGVRSLGKVTTGEYDAFLWVSA PDRSNKFLEAVNQEGSGLTMIDMNGWHLDDKLPNGKPVYELKKAVTESGWLSDSKVKVPC TKTLVVANTDAGDEVLETASTVLLKNLSRVLGTNGK >gi|289776635|gb|GG745509.1| GENE 972 1058799 - 1059047 164 82 aa, chain - ## HITS:1 COG:no KEGG:KPN_pKPN3p05991 NR:ns ## KEGG: KPN_pKPN3p05991 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 82 8 89 89 118 73.0 1e-25 MFDRYDHLLRSCALTLEPDEKQVLLNVLSGSFVEPVFIEYLAQEVIDSDDYIDGNPAASS LYEKFRNATYPQLLATVERIGR >gi|289776635|gb|GG745509.1| GENE 973 1059206 - 1059568 316 120 aa, chain - ## HITS:1 COG:no KEGG:ESA_03064 NR:ns ## KEGG: ESA_03064 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 63 14 76 76 75 61.0 7e-13 MKTITINTYDPAGRFDMNEAEAKQFFSYVERQATKAGHIVAFVEANYVDEFSEQFVEKCF SEYIPDSAKMLMNPYTGSVDTEENWLYEMPTWDDDPAECQRQFDTLVEVVKTENGDWVEA >gi|289776635|gb|GG745509.1| GENE 974 1059877 - 1060272 194 131 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2091 NR:ns ## KEGG: Kvar_2091 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 131 1 131 131 183 97.0 2e-45 MSDPLTGTGLIFGGGLIGSVIYGVITHTDFGVVFGAFGGAVFYVATTANLTRGRQIAYFM TSFIVGVLAAGLLGSKFTAWTGYTDRPLDALGAVVASAVTIKVLTFINSQDLSSLFGLLS RLRGGGSSGNK >gi|289776635|gb|GG745509.1| GENE 975 1060259 - 1060540 101 93 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2092 NR:ns ## KEGG: Kvar_2092 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 93 1 93 93 152 97.0 5e-36 MVINDPAALVNAVICAVIVCALMFYQRRGARHRPGISILAYLLVLIYASIPFQFIFGLYV QSHWLVVMANVMICAAVLWARGNVARLVDTLRH >gi|289776635|gb|GG745509.1| GENE 976 1060540 - 1061169 317 209 aa, chain + ## HITS:1 COG:STM0907 KEGG:ns NR:ns ## COG: STM0907 COG3179 # Protein_GI_number: 16764269 # Func_class: R General function prediction only # Function: Predicted chitinase # Organism: Salmonella typhimurium LT2 # 1 208 1 204 204 253 65.0 2e-67 MNQSQFQKAAGISAGLAARWFPHIVAAMKEFGITAAIDQAMFIAQVGHESTGFTQLVESF NYSVAGLNSFVRAGRLTQGQANSLGRRQGEPSLPLERQRAIANLVYSKRMGNNGPTDGWF YRGRGLIQITGLNNYRDCGNALKIDLVKKPELLAQDEYAARSAAWFYASRGCLRYPGDLA RVTQIINGGQNGIDDRRARFLKAKAVLVV >gi|289776635|gb|GG745509.1| GENE 977 1061172 - 1061447 194 91 aa, chain + ## HITS:1 COG:no KEGG:KP1_2178 NR:ns ## KEGG: KP1_2178 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 91 3 93 93 115 91.0 6e-25 MGIEAIAGLVVVILGAIAGAFGIGHARGTSKAEAKADQQRTEENAAATVAAAERKAEVVK GASDVQQTVSHMPDDDVDRELRQRFTRPGSR >gi|289776635|gb|GG745509.1| GENE 978 1061362 - 1061601 144 79 aa, chain + ## HITS:1 COG:no KEGG:ECL_01681 NR:ns ## KEGG: ECL_01681 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 26 67 1 42 44 70 80.0 2e-11 MYSRLLAICLMTMLIGSCAKDLPAPVVVDTACSWVRVIYLTDHDIDVLDKQTKRDILAHN KAVQANCSQLTERVQVIQL >gi|289776635|gb|GG745509.1| GENE 979 1061758 - 1061970 158 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRNSLPQLPHGYRYGDEHSIHPHNDGDYFAPQGCVIKSVNLVEGVVIYVPIQRYIKHLD LWVNAEGTVE >gi|289776635|gb|GG745509.1| GENE 980 1062403 - 1062648 277 81 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2099 NR:ns ## KEGG: Kvar_2099 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 81 1 81 81 115 93.0 4e-25 MSEITASEQIRLDIIKKVNYDTAAAKLAIDWVGDSYLKSELFADSFDRVFTESEIVSKTR KAIQEATEALALFDTGAEQAS >gi|289776635|gb|GG745509.1| GENE 981 1062984 - 1063223 79 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHEGVKDRDKNSLLLNDVSNKIYLPLVVLEEDLDNGELGKRFTHFFRMHFDYLSGAVTRQ DLAKVLAELLGAKIIGLRI >gi|289776635|gb|GG745509.1| GENE 982 1063397 - 1063690 176 97 aa, chain + ## HITS:1 COG:no KEGG:ESA_01023 NR:ns ## KEGG: ESA_01023 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 2 67 5 70 72 68 54.0 1e-10 MKFQVAKVYRYGRFMGYGIAVDGNLLDGQVSTTVDTDAKGIPLITAVFNMNNEHAENQIT IRLDDEGDSQKVDLIKKAVAEAAARNYRTAVNSVSKG >gi|289776635|gb|GG745509.1| GENE 983 1063961 - 1065151 306 396 aa, chain + ## HITS:1 COG:no KEGG:ECL_01682 NR:ns ## KEGG: ECL_01682 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 396 90 485 485 752 88.0 0 MDAGCEHLFLWDDDAWPIADDWHQPYIESQEPHLAYQFLDLAGRNKLNDLAVLYRDERHV AYTGQRGVMLYYHRSAIEKVGGFDSVYGRGMYEHSDLALRIHNAGLTTWAYADVTGSEKL IHSLDEHEAVERSVPKPDRVALVERNVKIHNERRDTGFTGYVEYRRQSDVVITTLLTSQP DPQRGSKMTASPDMLNKWASSLRQCVGIALVDELQTGPAGIELYRVPDVKMNVYFRRWLH IWQHLREHPEYRFVWCTDGTDVEMLRAPWEEMLPGKVYVGSEPKTYADIWAKQNHPERIY QEFIDAHRNDVMLNAGLLGGSRADVMSFAHGIIRLYYRIESYRFWKKEQAGAAVGDMIAF GLVAQSFADRIITGPLVHSVFKTDGLGKEIAWWKHK >gi|289776635|gb|GG745509.1| GENE 984 1065755 - 1065919 56 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEFTLVKVNNTRAHAALSTVTNPDAPFKTYPGTTANAAMLPINRLDTARIDYF >gi|289776635|gb|GG745509.1| GENE 985 1066274 - 1066783 169 169 aa, chain + ## HITS:1 COG:ECs1541 KEGG:ns NR:ns ## COG: ECs1541 COG3728 # Protein_GI_number: 15830795 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Escherichia coli O157:H7 # 1 167 1 181 187 96 43.0 2e-20 MLTAQKRKFAVALMSGMSQKDAAIKAGYSVKSARSKGSQLAKDPEVIAFISRKKKEVIET DDVPTYGKKVYTPAVNSPQKTEGAAVPAEGLAVVGQFDDPLQFLMAVMNDSTEEIDVRKD AAKAMLPYIHPKKGETGKKDARNAAAKVAAGKGKFGAMAPPKLVVNNKG >gi|289776635|gb|GG745509.1| GENE 986 1066787 - 1068445 1266 552 aa, chain + ## HITS:1 COG:Z1803 KEGG:ns NR:ns ## COG: Z1803 COG4626 # Protein_GI_number: 15801274 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 EDL933 # 4 552 5 553 553 723 66.0 0 MAQWSTACPDWESRLIAGESIIPPPIYADQAEQALGIFRELRVTDLPGKPTFGECSEDWV FDFVKVIFGGYDAETGNQLIREYGLLISKKNTKSTIAAGIMLTALILCWREDEEHLILAP TKEVADNSFKPAAGMIRADEELSDMFQIQDHIRTITHRVTRNTLKVVAADTDTVSGKKSG RILVDELWLFGKRANAEAMFMEALGGQVSRNEGWVIYLTTQSDEPPAGVFKERLDYWRDV RDGKINDPKTLGILYEFPDSMIQSKAYLQPENFYITNPNIGLSVSPEWIADNLRKNQAKT DGTLQQFLAKHLNIEIGLNLRSDRWAGVDFWEQQGLRVSFEDLLRRSEVITVGIDGGGLD DLLGFAAIGRDTKTREWICWCHAWAHEIAIRRRKSEESRFNDFVKAGDMTIVKRVGQDTE EVAEYVSRIYAAELLDKIGIDPSGVGQILDALIEVGIPADAVVGVSQGWRLGGAIKTTER KLAEGILIHGGQPMMAWCVGNARVEPKGNAILITKQASGKGKIDPLMALFNAVSLMALNP EPAKKDYQVFFV >gi|289776635|gb|GG745509.1| GENE 987 1068504 - 1070438 899 644 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2238 NR:ns ## KEGG: Ent638_2238 # Name: not_defined # Def: peptidase U35, phage prohead HK97 # Organism: Enterobacter_638 # Pathway: not_defined # 1 644 1 646 646 981 80.0 0 MTLKRACTLMTVKSVNEDDRIITGIASTPSPDRDGDIMEPEGAKFRSDTPFLWQHDRSQP IGTCTPKMVKEGLQITAKLVKPTSDMPSQLVARLDEAWASIKAGLVRGLSIGFRPIEYSF LDEGGIRFLSWDLLEVSAVTIPANAECSIQTVKSFDRQLLAASGTEKPVVKTSKTAGATA LKTNKGNNTMNISEQIKSFEAKRAALAASLDEVMSKAAEEGRTLDAEEEEGYDNTSAEIK SVDAHLKRLRDMESNMASTAKPVSKAASGEVNTVSSVAPGIIRVEPKLEKGIAFARFTKA LAAAKGARTEALQIAKNKYPEDIKLHHVLKAAVSAGTTTDPQWAGALVEYQDFANDFVEY LRPQTIIGKFGTGNIPSLREVPFNIRVPVQTSGGSADWVGQGKPKPLTNFNFETITFGFS KVAAISVLTEELLRFSNPKADVLVRNSLAEAVIARLDVDFVNPAKSEVIGVSPGSITNGA TTIPSTGSPDDDSTAAFQVFIDANLQPTGAVWLMSSSTALALSKRKNALGQKEYPDMTMF GGIFEGLPAIVSQYVGNQLVLVNAPDVYLADEGGVAVDMSSEASLEMESAPTHDSVTPTG VELVSMWQTNSVAIRAERWINWKRRRTAAVAVISGVNYSSSQGS >gi|289776635|gb|GG745509.1| GENE 988 1070477 - 1070644 65 55 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2237 NR:ns ## KEGG: Ent638_2237 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 55 1 55 55 64 67.0 1e-09 MAKIRYLQLTHDSAPGDVKAVDDRCAKVLVLLGKAEYFTGARTDGKKNKRKAENG >gi|289776635|gb|GG745509.1| GENE 989 1071007 - 1072002 282 331 aa, chain + ## HITS:1 COG:ECs1974 KEGG:ns NR:ns ## COG: ECs1974 COG4695 # Protein_GI_number: 15831228 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 331 121 454 454 498 72.0 1e-141 MALKIRNNAGKITELRLLDWRKVTPLVADDGSVFYQINPDNMTGIESSVTVPAREVIHDR FNCLFHPLIGLSPIYAAGLAAMQGHHIQENSAFFFRNGGKPSGVIEVPGSLTEENARTIK ENWDSGYSGKNAGKTAILSNGAKYNPTTVSAADAQTVEQLSMTAQIICSVFHVPAYKVGV GELPTHDNIEAQDQQYYSQCLQSLIESIELLLDEAFDLDGETGTEFDVNALLRMDSERRI KSLGEGVKNTILTPNEARRSENLPPLPGGDALYLQQQNYSLEALARRDASDDPFAKSGAS SVTAPEESGGKAMSESELTAAKAMLRGLLAK >gi|289776635|gb|GG745509.1| GENE 990 1071999 - 1072556 414 185 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2235 NR:ns ## KEGG: Ent638_2235 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 177 1 181 347 195 60.0 8e-49 MNERELSLIRALGEEFSEALSELRESFRKSLGDHVKETEEKLAALTKEVSTLKNTTAPDF TAQLADAVASLPAPKIPELPDIGAMVSEAVAALPPAQDGKSVTPEDVRPLLQELVTAAVG EIPVPRDGKDYDPAVLKQAVDDAVAALPPAQDGKSVTPEDVRPLLQELVTAAVGEIPVPR DGLAS >gi|289776635|gb|GG745509.1| GENE 991 1073307 - 1073564 146 85 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2235 NR:ns ## KEGG: Ent638_2235 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 4 84 266 346 347 148 82.0 6e-35 MNGQRNFIVTVNRASGASEKKSFDIPTMVYRGVFKSGDEYLPGDTVTWGGSLWHCDEQTQ DKPGETGSKGWTLAAKRGRDGRGKV >gi|289776635|gb|GG745509.1| GENE 992 1073561 - 1073887 190 108 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2234 NR:ns ## KEGG: Ent638_2234 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 107 1 109 110 155 78.0 3e-37 MIELVTLPQAKEHLRIDDDAGDGDLLLKIQSGSAALLSYIQGSRELVVSSDGNLIEGEPL KRVQGALLILLGYLDRNRNGEEEEKLQQGELPFSVTMLIYDLRRPTIF >gi|289776635|gb|GG745509.1| GENE 993 1074119 - 1074196 107 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEFAGLHITPSFFDSSKRGARPPM >gi|289776635|gb|GG745509.1| GENE 994 1074998 - 1075360 232 120 aa, chain + ## HITS:1 COG:no KEGG:PP_1572 NR:ns ## KEGG: PP_1572 # Name: not_defined # Def: hypothetical protein # Organism: P.putida # Pathway: not_defined # 1 120 1 122 122 135 57.0 4e-31 MIAPIFAVCAASQAVRDLLGSPVRLYPFGLQDDNIVYPYALWQNISGVPENYLDRRPDVD SYTLQVDVYSDTVTSAQEVAKALRDAIEPNAYITRWGSQSRDPETKRFRYSFDVDWIVKR >gi|289776635|gb|GG745509.1| GENE 995 1075650 - 1075907 178 85 aa, chain + ## HITS:1 COG:no KEGG:PLES_25521 NR:ns ## KEGG: PLES_25521 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 80 86 171 173 82 47.0 4e-15 MWQLAELDEYQDELIHWAIGWSDGESVPTVSAGEMVLPTDRTWYTFRAYVSDFPFDFQGN TVVSTAAAMQRSGQGLWVRKVQPGS >gi|289776635|gb|GG745509.1| GENE 996 1076087 - 1076617 185 176 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1809 NR:ns ## KEGG: Kvar_1809 # Name: not_defined # Def: KilA, N-terminal/APSES-type HTH DNA-binding domain protein # Organism: K.variicola # Pathway: not_defined # 1 176 1 176 176 313 92.0 1e-84 MQYPTVSVNGVSVRVDDEGRYSLNDLHAAAVANGEATESQRPSVFLRSAQVKRFIKALQS KALKSASEQNQPLKVTKGGDSTGAWGVELLAIRYAAWIKPEFEIEVYEVFRTVVRMGIGA MSRLNKIEHIINTETKVISQCASQMAKWGGGGRKRLLHAARERAADEVQLYLPGIA >gi|289776635|gb|GG745509.1| GENE 997 1076664 - 1077017 233 117 aa, chain + ## HITS:1 COG:no KEGG:PLES_25531 NR:ns ## KEGG: PLES_25531 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 117 1 116 119 130 60.0 2e-29 MQLTLETLKETGAFTGRPVEKEIKWKGRDGKEHIATVYVRPMGYHTTKAELLAYNGKSDP IAERIAAHICDQDGAPVFTAADILGTATPDRGALDGPIVMALLAAIHDVNELGKTTS >gi|289776635|gb|GG745509.1| GENE 998 1077050 - 1077313 194 87 aa, chain + ## HITS:1 COG:no KEGG:PLES_25541 NR:ns ## KEGG: PLES_25541 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 86 7 89 90 83 50.0 3e-15 MNGIGGRTIAEAQERMSRREFLVWLKYREKYGPLNIMMRTEWGASLVASVLANINKAKNT PPFKVSDFAPHINEAPLSLEEAMKGWD >gi|289776635|gb|GG745509.1| GENE 999 1077379 - 1077846 -56 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262044695|ref|ZP_06017747.1| ## NR: gi|262044695|ref|ZP_06017747.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] # 1 155 1 155 155 280 98.0 3e-74 MKSSGQLLSLAGIILAVYSLFFMDVSVEVGDGTRVNNIGLMAQQQNYLLVAVVLFLAGIF ISFSGRKKSLQEVDFTKIESLSSDDFVSLKDGEPCLNILAVDNLAMMFLKKHGSSSVNDI IFMNMPLIDRLEQGLPESLRKDFKSTLKRRLKDNC >gi|289776635|gb|GG745509.1| GENE 1000 1080338 - 1080817 100 159 aa, chain + ## HITS:1 COG:no KEGG:KPN_01430 NR:ns ## KEGG: KPN_01430 # Name: not_defined # Def: alkanesulfonate ABC transporter membrane protein # Organism: K.pneumoniae # Pathway: not_defined # 5 156 2 154 157 202 68.0 3e-51 MAITTTLYYPSAYLPGPLKESFGLTPVSPLKRTQMVTGRTRQRRAYTSTPTQTDLAWIFS DAQAQAFEAWFRDELSDGAAWFNIPLLTPVGLKNYVCRFTDIYKGPTPEGGFYWRYTAPV ELWERPLPPSGWGHYPEWIVGSSLLDIALNKEWPKHDSD >gi|289776635|gb|GG745509.1| GENE 1001 1080804 - 1081286 256 160 aa, chain + ## HITS:1 COG:no KEGG:CKO_01850 NR:ns ## KEGG: CKO_01850 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 4 160 6 162 162 217 70.0 1e-55 MTQIKRLYASSGPEVIIETLQITIGSDVHYLCQGYEGITATTENGDTVTFTACAIDIALP ARNADGTQDLKFALCNIDGVVSTAIRNALANRLPASLTYRRYISTDLAAPAEVPYTLKIK SGSWTATEVQITAGYMNILDTAWPRYRYTLPVFPGLRYIS >gi|289776635|gb|GG745509.1| GENE 1002 1081296 - 1081676 353 126 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2119 NR:ns ## KEGG: Kvar_2119 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 126 1 126 126 218 79.0 4e-56 MFNPDKYRSVTWLKGGRVYPQLDCFGIVNEIRRDLNLPVWPDFVGVTKDDGGLDREARRM MLTLERCEPCEGAGVACYSGSTVTHVGIVVSIDGLLHVAECNPGTNVTFLPLPRFKRRFV KVEFWQ >gi|289776635|gb|GG745509.1| GENE 1003 1081673 - 1084691 1047 1006 aa, chain + ## HITS:1 COG:no KEGG:KPN_01432 NR:ns ## KEGG: KPN_01432 # Name: not_defined # Def: putative kinase # Organism: K.pneumoniae # Pathway: not_defined # 1 1006 1 1015 1028 956 50.0 0 MTIRFYPSRLPGEPLETHEHGVTSIRSWLVANVEGYEDRDVPPLTVEVEGLLIPPGEWAT CVIRPDSDVRLYPVPFGLEAATIAWIGIGISVAAAAYSLVLMSTIDTGGYTSSTGRSLDL NPARANTAKLGDAIREVFGRVRIYPDYVVQPVTRFDAADPTKMRVQMLLCLGVGELIYTN GDIRVGSTPASTLPGFNITYFPPGADVSGDERSENWVNSTEVGGTSSGTGLDMAQTSPDA DDIIADSMTVSGSSVTFTGLDTDDDDDNDENDNALPPSWVAGAVVELKAPANYQITTAAG YSVIASPLLTEIAPVVGMPVTLGFNSVDYDLFIASYTPGQAAVPGTGGSAAKVQASAVPT TYDFSTSSSTFTITWQGITYPVSLVANYVSMSGLLAAITEGLTGSGLVAQDNGGTVLITE SASPFAGGAITSSSLPAAVFGDAPVYTSGTASTGGSPAVTANVTLAYNSATGTAFSGMPE GVQRLSLAHRGNEYRIVSTDGTTATVARLVNGAVDESWPGFTARTMIDYEATGLNDTLSW LGPFLVCPENETVDMFEVNFSFPNGICGFDSKGKKRLRHVEWEIQYRVYGSGAGWVSHQG EYALKNVNGLGFTERITLSSPGLVEVRCRRRNEQGSNNARDSMYWQALRGRLLTRPSSYP GVSLMAVTVETGGKLAAQSDRRVNVVATRAYDSGTARTISGALLHVGNSLGLEMDVDTIN ALESAYWTPRGEYFDFATGDSISALEMLQKITTAGKSYFLLSDGLASVGREGVKNWSGII SPHEMTEELQTSFTAPSADDYDGVDVTYINGITWAEETVKCRTPDNPTPVKIENYKLDGV LNQDHAYQIGMRRLMKYLHQRLGHNTTTELDALVYEYGDRILLTDDIPGNKTVSCLVVDM ATTGIETVFTVSEQLDWTFENPRAILRYQDGSASGLLEAAFVGDYQLSVPWQAAFDEIML NDPSIEPPRLVFCSSTRGIYDAIFEEIAPQADGTCQVTARQYSDIY Prediction of potential genes in microbial genomes Time: Mon Jul 11 05:41:17 2011 Seq name: gi|289775900|gb|GG745510.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.3, whole genome shotgun sequence Length of sequence - 778702 bp Number of predicted genes - 744, with homology - 739 Number of transcription units - 395, operones - 164 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 242 - 270 2.1 1 1 Tu 1 . - CDS 289 - 2874 1889 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 2914 - 2973 3.6 2 2 Op 1 11/0.040 - CDS 2992 - 3723 454 ## COG1496 Uncharacterized conserved protein 3 2 Op 2 . - CDS 3720 - 4700 1067 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 4752 - 4811 4.0 + Prom 4711 - 4770 2.8 4 3 Tu 1 . + CDS 4832 - 5569 922 ## COG4105 DNA uptake lipoprotein + Term 5586 - 5625 7.8 + Prom 5571 - 5630 6.2 5 4 Tu 1 . + CDS 5841 - 6176 521 ## PROTEIN SUPPORTED gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA + Term 6203 - 6230 1.5 + Prom 6206 - 6265 4.3 6 5 Tu 1 . + CDS 6431 - 7591 1461 ## COG0077 Prephenate dehydratase - Term 7498 - 7534 1.6 7 6 Op 1 1/0.707 - CDS 7588 - 8460 1003 ## COG3386 Gluconolactonase - Term 8470 - 8498 1.0 8 6 Op 2 7/0.127 - CDS 8523 - 9644 1550 ## COG0287 Prephenate dehydrogenase 9 6 Op 3 . - CDS 9654 - 10724 1311 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 10822 - 10881 2.8 + Prom 10830 - 10889 4.2 10 7 Op 1 . + CDS 11067 - 11576 168 ## Kvar_1142 hypothetical protein 11 7 Op 2 6/0.153 + CDS 11653 - 12792 1268 ## COG2199 FOG: GGDEF domain 12 7 Op 3 . + CDS 12806 - 13288 498 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Term 13200 - 13243 2.1 13 8 Op 1 . - CDS 13297 - 14664 1445 ## COG3182 Uncharacterized iron-regulated membrane protein 14 8 Op 2 . - CDS 14721 - 15179 273 ## KP1_4183 hypothetical protein - Prom 15228 - 15287 4.1 - Term 15230 - 15276 9.0 15 9 Op 1 33/0.000 - CDS 15298 - 15645 573 ## PROTEIN SUPPORTED gi|152971456|ref|YP_001336565.1| 50S ribosomal protein L19 16 9 Op 2 30/0.000 - CDS 15685 - 16452 521 ## COG0336 tRNA-(guanine-N1)-methyltransferase 17 9 Op 3 12/0.033 - CDS 16484 - 17032 194 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 18 9 Op 4 . - CDS 17032 - 17061 48 ## PROTEIN SUPPORTED gi|213976642|ref|ZP_03403901.1| 30S ribosomal protein S16 19 9 Op 5 23/0.000 - CDS 17051 - 17359 513 ## PROTEIN SUPPORTED gi|238896055|ref|YP_002920791.1| 30S ribosomal protein S16 - Prom 17484 - 17543 2.1 - Term 17476 - 17529 2.8 20 9 Op 6 . - CDS 17570 - 18934 2014 ## COG0541 Signal recognition particle GTPase - Prom 18990 - 19049 5.0 + Prom 19010 - 19069 5.3 21 10 Op 1 4/0.380 + CDS 19098 - 19889 1031 ## COG4137 ABC-type uncharacterized transport system, permease component 22 10 Op 2 . + CDS 19909 - 21195 1852 ## COG4536 Putative Mg2+ and Co2+ transporter CorB + Term 21219 - 21251 4.1 - Term 21265 - 21297 4.1 23 11 Tu 1 . - CDS 21317 - 21907 888 ## COG0576 Molecular chaperone GrpE (heat shock protein) - Prom 21946 - 22005 3.0 + Prom 21849 - 21908 3.6 24 12 Op 1 17/0.000 + CDS 22032 - 22910 1034 ## COG0061 Predicted sugar kinase + Term 22948 - 22987 -1.0 25 12 Op 2 5/0.247 + CDS 22997 - 24658 2141 ## COG0497 ATPase involved in DNA repair + Prom 24697 - 24756 4.6 26 13 Tu 1 . + CDS 24806 - 25147 360 ## COG2913 Small protein A (tmRNA-binding) + Term 25159 - 25197 2.3 - Term 25148 - 25188 3.6 27 14 Op 1 9/0.100 - CDS 25217 - 25507 322 ## COG2914 Uncharacterized protein conserved in bacteria 28 14 Op 2 . - CDS 25497 - 25934 490 ## COG2867 Oligoketide cyclase/lipid transport protein - Prom 25957 - 26016 5.7 + Prom 25921 - 25980 3.9 29 15 Tu 1 . + CDS 26084 - 26566 590 ## COG0691 tmRNA-binding protein + Term 26578 - 26618 3.1 + Prom 27344 - 27403 4.2 30 16 Tu 1 . + CDS 27472 - 28602 299 ## COG1479 Uncharacterized conserved protein + Prom 29141 - 29200 3.7 31 17 Tu 1 . + CDS 29288 - 29635 73 ## COG4938 Uncharacterized conserved protein + Prom 29693 - 29752 3.7 32 18 Tu 1 . + CDS 29886 - 30389 -328 ## Swoo_0708 hypothetical protein + Term 30559 - 30612 3.0 - Term 30873 - 30923 7.0 33 19 Op 1 . - CDS 31037 - 31837 635 ## KPK_1167 hypothetical protein - Prom 31866 - 31925 2.7 34 19 Op 2 . - CDS 31962 - 32846 872 ## COG0583 Transcriptional regulator - Prom 33015 - 33074 4.5 + Prom 32974 - 33033 3.1 35 20 Tu 1 . + CDS 33058 - 33630 697 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 36 21 Tu 1 . - CDS 33650 - 34003 345 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 34067 - 34126 5.7 + Prom 34142 - 34201 4.7 37 22 Op 1 27/0.000 + CDS 34337 - 35512 1398 ## COG0845 Membrane-fusion protein 38 22 Op 2 . + CDS 35536 - 38688 4401 ## COG0841 Cation/multidrug efflux pump + Term 38710 - 38743 5.4 - Term 38690 - 38741 6.1 39 23 Tu 1 . - CDS 38756 - 39235 591 ## Kvar_1117 Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family - Prom 39298 - 39357 5.3 - Term 39371 - 39409 6.7 40 24 Tu 1 . - CDS 39424 - 42312 2002 ## COG4870 Cysteine protease - Prom 42365 - 42424 3.2 - Term 42742 - 42774 -0.3 41 25 Tu 1 . - CDS 42961 - 43872 1297 ## COG0583 Transcriptional regulator - Prom 43894 - 43953 2.7 + Prom 43875 - 43934 2.0 42 26 Op 1 . + CDS 44027 - 44938 1350 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 43 26 Op 2 . + CDS 44949 - 45812 1193 ## KPK_1157 AP endonuclease, family 2 44 26 Op 3 . + CDS 45809 - 46876 1266 ## COG3491 Isopenicillin N synthase and related dioxygenases 45 26 Op 4 16/0.000 + CDS 46896 - 47699 1284 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 46 26 Op 5 . + CDS 47730 - 49250 177 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 47 26 Op 6 3/0.473 + CDS 49251 - 49979 1040 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 48 26 Op 7 3/0.473 + CDS 49985 - 50917 990 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 49 26 Op 8 . + CDS 50978 - 51772 1093 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 51848 - 51907 3.0 50 27 Tu 1 . + CDS 51930 - 52550 1104 ## KPK_1150 hypothetical protein + Term 52586 - 52625 5.0 - Term 52552 - 52592 7.8 51 28 Tu 1 . - CDS 52605 - 53441 974 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 53472 - 53531 1.8 + Prom 53610 - 53669 4.0 52 29 Op 1 . + CDS 53908 - 54459 525 ## Kvar_1085 fimbrial protein 53 29 Op 2 . + CDS 54496 - 55185 642 ## COG3121 P pilus assembly protein, chaperone PapD + Term 55284 - 55320 4.3 - Term 55014 - 55048 -0.9 54 30 Tu 1 . - CDS 55182 - 56105 851 ## Kvar_1083 fimbrial protein 55 31 Op 1 10/0.073 - CDS 56284 - 58797 3034 ## COG3188 P pilus assembly protein, porin PapC 56 31 Op 2 7/0.127 - CDS 58876 - 59535 761 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 59634 - 59693 2.4 - Term 59622 - 59655 0.1 57 32 Tu 1 . - CDS 59733 - 60326 546 ## COG3539 P pilus assembly protein, pilin FimA - Term 60960 - 60997 6.2 58 33 Tu 1 . - CDS 61026 - 62546 1901 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 62648 - 62707 6.1 + Prom 62612 - 62671 4.9 59 34 Tu 1 . + CDS 62810 - 64597 1878 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism 60 35 Op 1 1/0.707 - CDS 64600 - 65196 770 ## COG0671 Membrane-associated phospholipid phosphatase 61 35 Op 2 . - CDS 65256 - 66173 1164 ## COG0583 Transcriptional regulator 62 36 Op 1 . + CDS 66277 - 66882 773 ## COG1182 Acyl carrier protein phosphodiesterase 63 36 Op 2 7/0.127 + CDS 66958 - 67257 375 ## COG0640 Predicted transcriptional regulators 64 36 Op 3 . + CDS 67265 - 67795 468 ## COG0607 Rhodanese-related sulfurtransferase 65 37 Tu 1 . - CDS 67792 - 68694 992 ## COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases - Prom 68784 - 68843 3.8 + Prom 68764 - 68823 4.9 66 38 Tu 1 . + CDS 68900 - 69079 316 ## Kvar_1071 hypothetical protein - Term 69044 - 69087 -0.1 67 39 Tu 1 . - CDS 69158 - 69550 457 ## COG2916 DNA-binding protein H-NS - Prom 69583 - 69642 6.1 + Prom 70148 - 70207 9.4 68 40 Tu 1 . + CDS 70288 - 70737 487 ## Kvar_1069 hypothetical protein + Term 70752 - 70784 6.3 69 41 Tu 1 . - CDS 70814 - 71176 247 ## Kvar_1068 hypothetical protein - Prom 71362 - 71421 2.9 + Prom 71223 - 71282 4.6 70 42 Tu 1 . + CDS 71326 - 71673 558 ## COG4575 Uncharacterized conserved protein + Term 71762 - 71799 8.2 - Term 71741 - 71772 0.6 71 43 Tu 1 . - CDS 71792 - 73153 1139 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 73154 - 73213 3.6 72 44 Tu 1 . + CDS 73242 - 73673 721 ## COG2128 Uncharacterized conserved protein + Term 73693 - 73732 6.4 + Prom 73729 - 73788 2.7 73 45 Op 1 11/0.040 + CDS 73857 - 74102 279 ## COG0695 Glutaredoxin and related proteins 74 45 Op 2 18/0.000 + CDS 74099 - 74509 464 ## COG1780 Protein involved in ribonucleotide reduction 75 45 Op 3 24/0.000 + CDS 74611 - 76623 2640 ## COG0209 Ribonucleotide reductase, alpha subunit 76 45 Op 4 5/0.247 + CDS 76634 - 77596 1526 ## COG0208 Ribonucleotide reductase, beta subunit + Term 77605 - 77649 6.4 + Prom 77865 - 77924 4.8 77 46 Op 1 16/0.000 + CDS 77954 - 79156 1514 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 78 46 Op 2 14/0.027 + CDS 79149 - 80216 1402 ## COG4176 ABC-type proline/glycine betaine transport system, permease component + Term 80231 - 80276 6.1 79 47 Tu 1 1/0.707 + CDS 80295 - 81293 1626 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Term 81298 - 81345 3.7 + Prom 81370 - 81429 1.7 80 48 Op 1 . + CDS 81477 - 82223 806 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 81 48 Op 2 . + CDS 82213 - 82548 423 ## Kvar_1056 hypothetical protein + Prom 82556 - 82615 8.0 82 48 Op 3 7/0.127 + CDS 82639 - 83169 647 ## COG1846 Transcriptional regulators + Term 83216 - 83249 6.1 83 49 Op 1 19/0.000 + CDS 83295 - 84467 1651 ## COG1566 Multidrug resistance efflux pump 84 49 Op 2 1/0.707 + CDS 84483 - 86021 1992 ## COG0477 Permeases of the major facilitator superfamily + Term 86028 - 86065 2.1 + Prom 86023 - 86082 2.3 85 50 Tu 1 . + CDS 86158 - 87834 2110 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Term 87551 - 87583 1.0 86 51 Op 1 . - CDS 87813 - 88538 856 ## COG2207 AraC-type DNA-binding domain-containing proteins 87 51 Op 2 6/0.153 - CDS 88633 - 89148 652 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 89205 - 89264 3.0 - Term 89257 - 89288 2.5 88 52 Op 1 5/0.247 - CDS 89312 - 90868 2006 ## COG2918 Gamma-glutamylcysteine synthetase 89 52 Op 2 6/0.153 - CDS 90935 - 91276 252 ## COG1238 Predicted membrane protein - Prom 91298 - 91357 2.2 90 53 Tu 1 . - CDS 91360 - 91926 669 ## COG0637 Predicted phosphatase/phosphohexomutase - Term 91997 - 92024 1.5 91 54 Tu 1 . - CDS 92052 - 92366 482 ## COG2823 Predicted periplasmic or secreted lipoprotein - Prom 92414 - 92473 6.6 - TRNA 92655 - 92731 87.2 # Arg ACG 0 0 - TRNA 92960 - 93036 87.2 # Arg ACG 0 0 - TRNA 93098 - 93174 87.2 # Arg ACG 0 0 - TRNA 93325 - 93401 87.2 # Arg ACG 0 0 - TRNA 93406 - 93498 72.5 # Ser GCT 0 0 92 55 Tu 1 . - CDS 93821 - 94006 204 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 - Prom 94135 - 94194 4.3 93 56 Tu 1 . - CDS 94371 - 96998 3429 ## COG0013 Alanyl-tRNA synthetase - Term 97139 - 97195 -0.1 94 57 Tu 1 14/0.027 - CDS 97250 - 97750 553 ## COG2137 Uncharacterized protein conserved in bacteria - Term 97752 - 97815 5.3 95 58 Op 1 12/0.033 - CDS 97821 - 98879 1500 ## COG0468 RecA/RadA recombinase 96 58 Op 2 . - CDS 98970 - 99467 299 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 99537 - 99596 1.9 - Term 99557 - 99593 8.0 97 59 Op 1 12/0.033 - CDS 99606 - 100484 1031 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 98 59 Op 2 42/0.000 - CDS 100492 - 101355 1099 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 99 59 Op 3 . - CDS 101352 - 102029 182 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 100 59 Op 4 . - CDS 102026 - 102133 89 ## - Prom 102155 - 102214 5.7 101 60 Tu 1 . - CDS 102914 - 103993 1550 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 104171 - 104230 5.3 + Prom 104114 - 104173 6.3 102 61 Op 1 6/0.153 + CDS 104271 - 104834 899 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 103 61 Op 2 6/0.153 + CDS 104831 - 105802 1476 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 104 61 Op 3 5/0.247 + CDS 105816 - 106178 509 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 105 61 Op 4 5/0.247 + CDS 106191 - 106970 1049 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 107142 - 107175 2.7 + Prom 107426 - 107485 1.7 106 62 Op 1 4/0.380 + CDS 107589 - 107948 303 ## COG4578 Glucitol operon activator 107 62 Op 2 . + CDS 108016 - 108789 950 ## COG1349 Transcriptional regulators of sugar metabolism 108 62 Op 3 . + CDS 108782 - 109747 1373 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 109869 - 109904 -0.1 - Term 109630 - 109668 -0.6 109 63 Tu 1 . - CDS 109710 - 111260 1826 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Prom 111299 - 111358 6.2 + Prom 111352 - 111411 4.2 110 64 Op 1 5/0.247 + CDS 111448 - 112902 1966 ## COG0426 Uncharacterized flavoproteins 111 64 Op 2 . + CDS 112899 - 114032 1454 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 114257 - 114284 0.5 112 65 Op 1 . - CDS 114227 - 115174 852 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 113 65 Op 2 . - CDS 115171 - 115866 679 ## COG0684 Demethylmenaquinone methyltransferase - Prom 115974 - 116033 3.3 + Prom 115859 - 115918 6.3 114 66 Tu 1 . + CDS 116033 - 116749 780 ## COG1414 Transcriptional regulator + Term 116757 - 116800 4.1 - Term 116751 - 116780 2.8 115 67 Tu 1 . - CDS 116789 - 118144 1307 ## COG0477 Permeases of the major facilitator superfamily - Prom 118361 - 118420 5.7 116 68 Op 1 . - CDS 118635 - 119648 1154 ## COG3376 High-affinity nickel permease 117 68 Op 2 4/0.380 - CDS 119645 - 121879 1877 ## COG0068 Hydrogenase maturation factor 118 68 Op 3 3/0.473 - CDS 121888 - 122415 673 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 122466 - 122525 4.5 119 69 Tu 1 . - CDS 122551 - 123564 1207 ## COG1609 Transcriptional regulators - Prom 123684 - 123743 2.4 + Prom 123665 - 123724 7.3 120 70 Op 1 8/0.107 + CDS 123832 - 125274 1912 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 121 70 Op 2 . + CDS 125301 - 126725 2040 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 126739 - 126793 7.0 + Prom 126812 - 126871 3.9 122 71 Tu 1 . + CDS 126907 - 127215 268 ## KP1_4319 hypothetical protein - Term 126985 - 127041 3.0 123 72 Op 1 . - CDS 127212 - 127649 621 ## COG0680 Ni,Fe-hydrogenase maturation factor 124 72 Op 2 . - CDS 127675 - 128085 508 ## Kvar_1011 formate hydrogenlyase maturation HycH 125 72 Op 3 6/0.153 - CDS 128082 - 128849 1083 ## COG3260 Ni,Fe-hydrogenase III small subunit 126 72 Op 4 5/0.247 - CDS 128849 - 129391 674 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 127 72 Op 5 7/0.127 - CDS 129401 - 131110 2745 ## COG3261 Ni,Fe-hydrogenase III large subunit 128 72 Op 6 10/0.073 - CDS 131127 - 132050 1461 ## COG0650 Formate hydrogenlyase subunit 4 129 72 Op 7 5/0.247 - CDS 132053 - 133144 1779 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit - Prom 133230 - 133289 80.4 130 73 Op 1 4/0.380 - CDS 134073 - 134741 1015 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 131 73 Op 2 . - CDS 134738 - 135346 635 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 132 73 Op 3 . - CDS 135429 - 135878 677 ## Kvar_1004 formate hydrogenlyase regulatory protein HycA - Prom 135909 - 135968 4.1 + Prom 135868 - 135927 4.5 133 74 Op 1 11/0.040 + CDS 136088 - 136432 314 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 134 74 Op 2 8/0.107 + CDS 136436 - 137308 991 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 135 74 Op 3 13/0.027 + CDS 137299 - 137571 388 ## COG0298 Hydrogenase maturation factor 136 74 Op 4 4/0.380 + CDS 137571 - 138692 1256 ## COG0409 Hydrogenase maturation factor 137 74 Op 5 3/0.473 + CDS 138689 - 139699 1277 ## COG0309 Hydrogenase maturation factor + Term 139849 - 139880 -0.9 + Prom 139769 - 139828 5.4 138 75 Tu 1 . + CDS 139899 - 141956 2598 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains + Term 141960 - 142021 2.7 139 76 Tu 1 . - CDS 142010 - 143410 1831 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 143418 - 143452 6.6 140 77 Op 1 . - CDS 143461 - 145653 2154 ## KPK_1052 glycosyl hydrolase, family 5 141 77 Op 2 . - CDS 145666 - 147003 1877 ## COG4580 Maltoporin (phage lambda and maltose receptor) - Prom 147047 - 147106 3.2 - Term 147171 - 147203 5.4 142 78 Tu 1 . - CDS 147266 - 148537 1377 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 148668 - 148727 5.6 + Prom 148575 - 148634 2.7 143 79 Op 1 10/0.073 + CDS 148715 - 149029 430 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 144 79 Op 2 13/0.027 + CDS 149039 - 150361 1941 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 145 79 Op 3 1/0.707 + CDS 150385 - 150699 440 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 146 79 Op 4 . + CDS 150750 - 151625 275 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase + Prom 151928 - 151987 41.7 147 80 Op 1 . + CDS 152071 - 153033 1290 ## COG1609 Transcriptional regulators + Term 153036 - 153072 0.4 + Prom 153112 - 153171 4.3 148 80 Op 2 25/0.000 + CDS 153216 - 154133 1081 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 149 80 Op 3 42/0.000 + CDS 154130 - 154951 1011 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 150 80 Op 4 10/0.073 + CDS 154948 - 155796 1364 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 151 80 Op 5 . + CDS 155790 - 156644 1141 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 156686 - 156732 3.1 - Term 156581 - 156631 4.2 152 81 Op 1 . - CDS 156704 - 157045 307 ## Kvar_0984 hypothetical protein 153 81 Op 2 . - CDS 157113 - 158000 876 ## COG0583 Transcriptional regulator + Prom 157982 - 158041 3.9 154 82 Op 1 3/0.473 + CDS 158187 - 159128 1049 ## COG0679 Predicted permeases 155 82 Op 2 . + CDS 159164 - 160873 1640 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 160898 - 160940 0.3 - Term 160648 - 160693 -0.2 156 83 Tu 1 . - CDS 160913 - 161206 360 ## COG3526 Uncharacterized protein conserved in bacteria - Prom 161283 - 161342 4.9 157 84 Op 1 . + CDS 161181 - 161381 59 ## 158 84 Op 2 4/0.380 + CDS 161422 - 163785 3105 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 163810 - 163841 5.5 159 85 Op 1 4/0.380 + CDS 163857 - 164888 1240 ## COG3720 Putative heme degradation protein 160 85 Op 2 8/0.107 + CDS 164885 - 165703 951 ## COG4558 ABC-type hemin transport system, periplasmic component 161 85 Op 3 10/0.073 + CDS 165703 - 166698 1489 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 162 85 Op 4 . + CDS 166691 - 167470 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 167535 - 167594 6.3 163 86 Tu 1 . + CDS 167750 - 168232 218 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Prom 168555 - 168614 4.1 164 87 Tu 1 . + CDS 168693 - 169025 137 ## Kvar_0972 hypothetical protein + Prom 169168 - 169227 3.9 165 88 Tu 1 . + CDS 169294 - 171855 3878 ## COG0249 Mismatch repair ATPase (MutS family) + Term 171876 - 171911 6.4 - Term 171855 - 171904 10.7 166 89 Tu 1 . - CDS 171974 - 172126 156 ## KPN_03095 small toxic membrane polypeptide - Term 172421 - 172464 9.5 167 90 Op 1 . - CDS 172465 - 172701 356 ## Kvar_0969 cytoplasmic protein 168 90 Op 2 6/0.153 - CDS 172712 - 174139 2125 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 169 90 Op 3 . - CDS 174139 - 174732 657 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase - Prom 174768 - 174827 3.7 + Prom 174721 - 174780 3.9 170 91 Tu 1 . + CDS 174907 - 175314 533 ## COG1846 Transcriptional regulators 171 92 Tu 1 . - CDS 175323 - 176210 938 ## COG0583 Transcriptional regulator - Prom 176237 - 176296 2.7 + Prom 176183 - 176242 2.6 172 93 Op 1 2/0.600 + CDS 176319 - 177521 1357 ## COG0477 Permeases of the major facilitator superfamily 173 93 Op 2 . + CDS 177518 - 177895 338 ## COG4460 Uncharacterized protein conserved in bacteria + Term 178136 - 178169 0.4 - Term 177898 - 177924 -0.6 174 94 Tu 1 . - CDS 177948 - 178940 1306 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 175 95 Tu 1 . - CDS 179098 - 180234 605 ## COG0739 Membrane proteins related to metalloendopeptidases - Term 180296 - 180342 0.3 176 96 Op 1 13/0.027 - CDS 180360 - 180986 715 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase 177 96 Op 2 8/0.107 - CDS 180980 - 181741 749 ## COG0496 Predicted acid phosphatase 178 96 Op 3 8/0.107 - CDS 181722 - 182771 1069 ## COG0585 Uncharacterized conserved protein 179 96 Op 4 19/0.000 - CDS 182768 - 183247 848 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 180 96 Op 5 11/0.040 - CDS 183247 - 183957 332 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 181 96 Op 6 . - CDS 183977 - 184294 415 ## COG2919 Septum formation initiator - Term 184318 - 184354 3.3 182 97 Op 1 . - CDS 184435 - 184761 335 ## Kvar_0954 hypothetical protein 183 97 Op 2 7/0.127 - CDS 184812 - 185417 546 ## COG0529 Adenylylsulfate kinase and related kinases 184 97 Op 3 18/0.000 - CDS 185417 - 186844 1818 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 185 97 Op 4 4/0.380 - CDS 186854 - 187762 1474 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 186 97 Op 5 . - CDS 187772 - 189187 1666 ## COG0007 Uroporphyrinogen-III methylase - Prom 189322 - 189381 4.3 + Prom 189334 - 189393 2.6 187 98 Tu 1 . + CDS 189425 - 190480 1197 ## COG2234 Predicted aminopeptidases + Term 190556 - 190604 2.5 188 99 Tu 1 . + CDS 191183 - 191650 300 ## Spro_0225 hypothetical protein 189 100 Tu 1 . + CDS 192956 - 193459 -280 ## Ctu_10250 hypothetical protein 190 101 Op 1 . - CDS 193948 - 194820 306 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 191 101 Op 2 . - CDS 194865 - 195431 37 ## SC2871 putative cytoplasmic protein 192 101 Op 3 . - CDS 195497 - 196207 256 ## ECH74115_4010 CRISPR-associated protein Cas5 193 101 Op 4 . - CDS 196254 - 197309 1049 ## SeD_A3252 crispr-associated protein, CSE4 family 194 101 Op 5 . - CDS 197328 - 197870 417 ## SPC_2986 transposase 195 101 Op 6 . - CDS 197867 - 199423 1269 ## STM2943 cytoplasmic protein 196 101 Op 7 1/0.707 - CDS 199435 - 201675 1357 ## COG1203 Predicted helicases - Prom 201834 - 201893 4.2 - Term 202248 - 202278 1.0 197 102 Op 1 11/0.040 - CDS 202305 - 203039 1139 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 198 102 Op 2 11/0.040 - CDS 203138 - 204850 2496 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 199 102 Op 3 . - CDS 204850 - 206649 2061 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) - Prom 206729 - 206788 4.9 + Prom 206737 - 206796 4.2 200 103 Tu 1 . + CDS 206969 - 207331 473 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 201 104 Tu 1 . - CDS 207685 - 208356 218 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 - Prom 208589 - 208648 9.3 202 105 Tu 1 . + CDS 208832 - 209941 759 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 209963 - 209994 4.1 - Term 209951 - 209982 4.1 203 106 Op 1 8/0.107 - CDS 210005 - 211303 1345 ## COG0148 Enolase - Term 211333 - 211370 7.1 204 106 Op 2 5/0.247 - CDS 211384 - 213021 1719 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 213067 - 213126 5.2 - Term 213235 - 213288 1.1 205 107 Tu 1 . - CDS 213302 - 214093 1118 ## COG1694 Predicted pyrophosphatase 206 108 Tu 1 . - CDS 214536 - 216773 2817 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 207 109 Tu 1 . - CDS 216895 - 218199 1059 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 218139 - 218198 2.8 208 110 Tu 1 . + CDS 218312 - 221062 3439 ## COG0642 Signal transduction histidine kinase + Term 221092 - 221126 -0.7 209 111 Op 1 1/0.707 - CDS 221292 - 222431 1372 ## COG1929 Glycerate kinase 210 111 Op 2 5/0.247 - CDS 222504 - 223844 1913 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 211 111 Op 3 7/0.127 - CDS 223862 - 225202 1799 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 212 111 Op 4 4/0.380 - CDS 225199 - 226557 1998 ## COG0477 Permeases of the major facilitator superfamily - Prom 226684 - 226743 1.7 - Term 226986 - 227024 2.5 213 112 Op 1 5/0.247 - CDS 227029 - 227472 946 ## COG0716 Flavodoxins 214 112 Op 2 7/0.127 - CDS 227477 - 228280 202 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 215 112 Op 3 . - CDS 228271 - 228600 490 ## COG3098 Uncharacterized protein conserved in bacteria - Prom 228626 - 228685 9.8 - Term 229151 - 229216 5.2 216 113 Tu 1 . - CDS 229233 - 229778 639 ## Kvar_0919 Syd family protein 217 114 Tu 1 6/0.153 + CDS 229847 - 230692 1056 ## COG0780 Enzyme related to GTP cyclohydrolase I + Prom 230712 - 230771 2.0 218 115 Tu 1 4/0.380 + CDS 230834 - 232171 1776 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 232183 - 232232 2.6 + Prom 232542 - 232601 4.2 219 116 Op 1 10/0.073 + CDS 232681 - 233970 1869 ## COG0814 Amino acid permeases 220 116 Op 2 . + CDS 234036 - 235403 1780 ## COG1760 L-serine deaminase + Prom 235423 - 235482 5.4 221 117 Tu 1 . + CDS 235542 - 236483 1500 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 222 118 Op 1 3/0.473 - CDS 236529 - 237752 1532 ## COG1960 Acyl-CoA dehydrogenases 223 118 Op 2 . - CDS 237763 - 239184 1840 ## COG0477 Permeases of the major facilitator superfamily - Prom 239252 - 239311 5.9 - Term 239299 - 239334 4.9 224 119 Op 1 22/0.000 - CDS 239378 - 240256 955 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 225 119 Op 2 32/0.000 - CDS 240253 - 240951 813 ## COG2011 ABC-type metal ion transport system, permease component 226 119 Op 3 . - CDS 240948 - 241970 1169 ## COG1135 ABC-type metal ion transport system, ATPase component 227 119 Op 4 1/0.707 - CDS 241967 - 243373 1800 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 228 119 Op 5 1/0.707 - CDS 243447 - 244847 1370 ## COG4529 Uncharacterized protein conserved in bacteria 229 119 Op 6 . - CDS 244894 - 246066 1645 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 246136 - 246195 5.5 + Prom 246129 - 246188 5.9 230 120 Op 1 . + CDS 246338 - 248281 2091 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Prom 248298 - 248357 2.3 231 120 Op 2 . + CDS 248378 - 249133 720 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) 232 121 Op 1 5/0.247 - CDS 249204 - 250352 1439 ## COG1454 Alcohol dehydrogenase, class IV 233 121 Op 2 . - CDS 250380 - 251027 950 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Prom 251345 - 251404 4.6 234 122 Op 1 3/0.473 + CDS 251633 - 252904 1709 ## COG0738 Fucose permease 235 122 Op 2 4/0.380 + CDS 252937 - 254712 2372 ## COG2407 L-fucose isomerase and related proteins 236 123 Op 1 5/0.247 + CDS 254820 - 256238 1501 ## COG1070 Sugar (pentulose and hexulose) kinases 237 123 Op 2 4/0.380 + CDS 256240 - 256662 577 ## COG4154 Fucose dissimilation pathway protein FucU 238 123 Op 3 . + CDS 256721 - 257431 884 ## COG1349 Transcriptional regulators of sugar metabolism 239 124 Op 1 5/0.247 - CDS 257480 - 258580 1636 ## COG2933 Predicted SAM-dependent methyltransferase 240 124 Op 2 6/0.153 - CDS 258573 - 258968 633 ## COG2363 Uncharacterized small membrane protein 241 124 Op 3 . - CDS 258988 - 259905 811 ## COG0583 Transcriptional regulator - Prom 259978 - 260037 6.5 242 125 Tu 1 . - CDS 260257 - 260487 366 ## Kvar_0893 hypothetical protein - Prom 260557 - 260616 2.1 + Prom 260462 - 260521 3.6 243 126 Op 1 7/0.127 + CDS 260679 - 261884 1597 ## COG0520 Selenocysteine lyase 244 126 Op 2 . + CDS 261884 - 262321 508 ## COG2166 SufE protein probably involved in Fe-S center assembly + Term 262385 - 262428 4.7 245 127 Op 1 8/0.107 - CDS 262462 - 263271 1012 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Term 263279 - 263335 7.3 246 127 Op 2 . - CDS 263359 - 264456 1359 ## COG2821 Membrane-bound lytic murein transglycosylase - Prom 264489 - 264548 2.8 + TRNA 264667 - 264743 86.1 # Met CAT 0 0 + TRNA 264779 - 264855 86.1 # Met CAT 0 0 + TRNA 264888 - 264964 86.1 # Met CAT 0 0 - Term 265016 - 265049 4.3 247 128 Op 1 2/0.600 - CDS 265059 - 266114 1301 ## COG2038 NaMN:DMB phosphoribosyltransferase 248 128 Op 2 4/0.380 - CDS 266158 - 266703 617 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 249 128 Op 3 2/0.600 - CDS 266697 - 268220 1883 ## COG1492 Cobyric acid synthase 250 128 Op 4 34/0.000 - CDS 268217 - 269041 241 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 251 128 Op 5 8/0.107 - CDS 269050 - 269751 730 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 252 128 Op 6 4/0.380 - CDS 269714 - 269995 373 ## COG1930 ABC-type cobalt transport system, periplasmic component 253 128 Op 7 . - CDS 269997 - 270734 987 ## COG0310 ABC-type Co2+ transport system, permease component 254 128 Op 8 2/0.600 - CDS 270734 - 271444 1011 ## COG2243 Precorrin-2 methylase 255 128 Op 9 1/0.707 - CDS 271441 - 272235 1114 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 256 128 Op 10 4/0.380 - CDS 272246 - 273031 742 ## COG2099 Precorrin-6x reductase 257 128 Op 11 6/0.153 - CDS 273028 - 273753 1090 ## COG1010 Precorrin-3B methylase 258 128 Op 12 12/0.033 - CDS 273753 - 274808 1106 ## COG2073 Cobalamin biosynthesis protein CbiG 259 128 Op 13 5/0.247 - CDS 274789 - 275562 1108 ## COG2875 Precorrin-4 methylase 260 128 Op 14 2/0.600 - CDS 275555 - 276124 677 ## COG2242 Precorrin-6B methylase 2 261 128 Op 15 6/0.153 - CDS 276114 - 276563 527 ## COG2241 Precorrin-6B methylase 1 - Prom 276587 - 276646 43.8 262 129 Op 1 5/0.247 - CDS 277248 - 278348 1398 ## COG1903 Cobalamin biosynthesis protein CbiD 263 129 Op 2 2/0.600 - CDS 278345 - 278980 830 ## COG2082 Precorrin isomerase 264 129 Op 3 3/0.473 - CDS 278991 - 279950 1081 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 265 129 Op 4 1/0.707 - CDS 279947 - 281323 1444 ## COG1797 Cobyrinic acid a,c-diamide synthase 266 130 Tu 1 . - CDS 281875 - 282786 992 ## COG4936 Predicted sensor domain - Prom 282821 - 282880 6.0 - Term 282881 - 282923 6.1 267 131 Tu 1 . - CDS 282989 - 283798 883 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Prom 284164 - 284223 10.4 268 132 Op 1 4/0.380 + CDS 284323 - 284607 210 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 269 132 Op 2 2/0.600 + CDS 284604 - 285416 1152 ## COG4816 Ethanolamine utilization protein 270 132 Op 3 . + CDS 285435 - 287099 2245 ## COG4909 Propanediol dehydratase, large subunit 271 132 Op 4 1/0.707 + CDS 287110 - 287799 798 ## COG4909 Propanediol dehydratase, large subunit 272 132 Op 5 . + CDS 287814 - 288338 667 ## COG4910 Propanediol dehydratase, small subunit 273 132 Op 6 . + CDS 288351 - 290183 2201 ## Kvar_0862 diol/glycerol dehydratase reactivating factor large subunit 274 132 Op 7 . + CDS 290173 - 290523 267 ## KPK_0906 propanediol utilization protein PduH 275 132 Op 8 5/0.247 + CDS 290542 - 290817 481 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 276 132 Op 9 2/0.600 + CDS 290839 - 291306 353 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 277 132 Op 10 . + CDS 291306 - 291938 414 ## COG4869 Propanediol utilization protein 278 132 Op 11 . + CDS 291947 - 292426 326 ## KP1_4481 propanediol utilization protein 279 132 Op 12 2/0.600 + CDS 292430 - 292705 206 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 280 132 Op 13 2/0.600 + CDS 292716 - 293732 822 ## COG2096 Uncharacterized conserved protein 281 132 Op 14 6/0.153 + CDS 293729 - 295114 984 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 282 132 Op 15 1/0.707 + CDS 295126 - 296238 1070 ## COG1454 Alcohol dehydrogenase, class IV 283 132 Op 16 2/0.600 + CDS 296235 - 297587 1246 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 284 132 Op 17 2/0.600 + CDS 297590 - 298144 569 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 285 132 Op 18 4/0.380 + CDS 298144 - 298494 535 ## COG4810 Ethanolamine utilization protein 286 132 Op 19 1/0.707 + CDS 298499 - 298939 316 ## COG4917 Ethanolamine utilization protein 287 132 Op 20 1/0.707 + CDS 298936 - 300150 1471 ## COG0282 Acetate kinase 288 132 Op 21 . + CDS 300242 - 301108 871 ## COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase + Term 301115 - 301162 0.6 289 133 Op 1 1/0.707 - CDS 301112 - 302188 1285 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 290 133 Op 2 . - CDS 302206 - 303459 1438 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 303509 - 303568 5.1 + Prom 303602 - 303661 7.0 291 134 Tu 1 . + CDS 303687 - 305018 1565 ## COG0548 Acetylglutamate kinase + Term 305109 - 305143 4.2 292 135 Tu 1 . + CDS 305250 - 305570 302 ## Kvar_0843 hypothetical protein + Term 305580 - 305611 1.2 293 136 Op 1 13/0.027 - CDS 305630 - 307474 2126 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 294 136 Op 2 5/0.247 - CDS 307471 - 311007 4382 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 295 136 Op 3 5/0.247 - CDS 311004 - 313889 3652 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like - Term 313903 - 313935 1.7 296 137 Op 1 5/0.247 - CDS 314010 - 317387 4145 ## COG1330 Exonuclease V gamma subunit 297 137 Op 2 . - CDS 317400 - 317723 325 ## COG4967 Tfp pilus assembly protein PilV 298 137 Op 3 . - CDS 317708 - 318115 463 ## Kvar_0837 hypothetical protein 299 137 Op 4 12/0.033 - CDS 318112 - 318669 516 ## COG4795 Type II secretory pathway, component PulJ 300 137 Op 5 4/0.380 - CDS 318666 - 319217 335 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 319327 - 319386 3.8 - Term 319351 - 319382 5.5 301 138 Op 1 11/0.040 - CDS 319404 - 320198 1111 ## COG0207 Thymidylate synthase 302 138 Op 2 5/0.247 - CDS 320205 - 321080 1297 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 321220 - 321279 2.8 303 139 Op 1 7/0.127 - CDS 321326 - 323572 3063 ## COG3605 Signal transduction protein containing GAF and PtsI domains 304 139 Op 2 . - CDS 323585 - 324115 265 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 324362 - 324421 4.7 + Prom 324692 - 324751 6.3 305 140 Op 1 5/0.247 + CDS 324798 - 325493 873 ## COG3066 DNA mismatch repair protein 306 140 Op 2 . + CDS 325557 - 326270 1017 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 326280 - 326317 7.1 + Prom 326301 - 326360 1.7 307 141 Tu 1 . + CDS 326394 - 326612 273 ## Kvar_0828 hypothetical protein + Term 326791 - 326819 -1.0 + Prom 326751 - 326810 5.8 308 142 Tu 1 . + CDS 326833 - 327873 1489 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Term 327872 - 327915 4.1 309 143 Op 1 5/0.247 - CDS 327977 - 329170 1655 ## COG0477 Permeases of the major facilitator superfamily 310 143 Op 2 . - CDS 329163 - 331322 2849 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 331376 - 331435 4.0 + Prom 331853 - 331912 3.4 311 144 Tu 1 . + CDS 331943 - 332959 1295 ## COG1609 Transcriptional regulators + Term 333076 - 333118 2.5 312 145 Op 1 . - CDS 332920 - 333399 620 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 313 145 Op 2 . - CDS 333396 - 334169 1130 ## COG2186 Transcriptional regulators 314 145 Op 3 8/0.107 - CDS 334237 - 335664 1870 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 315 145 Op 4 . - CDS 335672 - 337009 1969 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 337165 - 337224 1.9 + Prom 337215 - 337274 3.1 316 146 Tu 1 . + CDS 337300 - 338310 1008 ## COG1609 Transcriptional regulators - Term 338175 - 338214 -0.9 317 147 Tu 1 . - CDS 338303 - 339565 1620 ## COG0019 Diaminopimelate decarboxylase - Prom 339629 - 339688 6.5 318 148 Tu 1 . + CDS 339745 - 340629 1124 ## COG0583 Transcriptional regulator 319 149 Tu 1 . - CDS 340595 - 341308 944 ## COG1794 Aspartate racemase - Prom 341419 - 341478 3.4 + Prom 341356 - 341415 2.8 320 150 Tu 1 . + CDS 341448 - 341774 513 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 341783 - 341814 3.5 + Prom 341963 - 342022 5.5 321 151 Op 1 38/0.000 + CDS 342228 - 343118 1299 ## COG1175 ABC-type sugar transport systems, permease components 322 151 Op 2 21/0.000 + CDS 343111 - 344013 1277 ## COG0395 ABC-type sugar transport system, permease component 323 151 Op 3 9/0.100 + CDS 344026 - 345153 1555 ## COG3839 ABC-type sugar transport systems, ATPase components 324 151 Op 4 . + CDS 345170 - 346456 1708 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 346388 - 346432 -1.0 325 152 Tu 1 . - CDS 346516 - 347859 1361 ## Kvar_0810 glycoporin RfaY - Prom 347917 - 347976 1.7 - Term 347920 - 347959 5.3 326 153 Op 1 . - CDS 347981 - 349414 1761 ## COG1621 Beta-fructosidases (levanase/invertase) 327 153 Op 2 . - CDS 349434 - 350672 1761 ## COG0477 Permeases of the major facilitator superfamily - Prom 350697 - 350756 3.1 + Prom 350731 - 350790 3.0 328 154 Tu 1 . + CDS 350917 - 351912 1366 ## COG1609 Transcriptional regulators 329 155 Tu 1 . - CDS 351909 - 353330 2134 ## COG0477 Permeases of the major facilitator superfamily - Prom 353544 - 353603 2.9 - Term 353488 - 353515 0.1 330 156 Tu 1 . - CDS 353628 - 354389 1064 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 354603 - 354662 5.6 331 157 Tu 1 . + CDS 354877 - 356052 1584 ## COG0823 Periplasmic component of the Tol biopolymer transport system + Term 356085 - 356117 3.0 - Term 356124 - 356157 3.1 332 158 Tu 1 . - CDS 356187 - 356882 890 ## Kvar_0803 oligogalacturonate-specific porin - Prom 356911 - 356970 7.1 - Term 357081 - 357111 3.0 333 159 Tu 1 . - CDS 357132 - 358310 1515 ## COG0183 Acetyl-CoA acetyltransferase - Prom 358361 - 358420 5.8 334 160 Tu 1 . - CDS 358429 - 359298 957 ## COG0583 Transcriptional regulator + Prom 359289 - 359348 6.0 335 161 Tu 1 . + CDS 359401 - 359862 636 ## COG4125 Predicted membrane protein + Term 359868 - 359907 5.1 + Prom 359893 - 359952 5.7 336 162 Op 1 . + CDS 359987 - 361216 1533 ## COG0814 Amino acid permeases + Prom 361253 - 361312 2.2 337 162 Op 2 . + CDS 361336 - 362214 982 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 362366 - 362407 6.0 + Prom 362502 - 362561 3.9 338 163 Op 1 . + CDS 362597 - 363301 291 ## Kvar_0797 type IV pilus assembly PilZ 339 163 Op 2 . + CDS 363319 - 363891 276 ## KPK_0838 transcriptional regulator, LuxR family + Term 363903 - 363959 15.1 + Prom 363936 - 363995 5.7 340 164 Tu 1 . + CDS 364035 - 364790 608 ## COG2200 FOG: EAL domain + Term 365007 - 365057 -0.5 - Term 364744 - 364773 -0.9 341 165 Op 1 . - CDS 364787 - 365422 582 ## Kvar_0794 fimbrial protein 342 165 Op 2 6/0.153 - CDS 365436 - 366431 973 ## COG3539 P pilus assembly protein, pilin FimA 343 165 Op 3 10/0.073 - CDS 366422 - 368908 3207 ## COG3188 P pilus assembly protein, porin PapC 344 165 Op 4 . - CDS 368920 - 369621 707 ## COG3121 P pilus assembly protein, chaperone PapD - Term 369627 - 369666 4.1 345 165 Op 5 . - CDS 369717 - 370325 429 ## KP1_4561 type 3 fimbrial protein MrkA precursor - Prom 370474 - 370533 3.8 + Prom 370908 - 370967 9.7 346 166 Tu 1 . + CDS 371031 - 371240 317 ## KP1_4563 hypothetical protein + Term 371328 - 371358 1.8 347 167 Tu 1 . - CDS 371336 - 372232 1109 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 372262 - 372321 2.2 348 168 Tu 1 . + CDS 372314 - 372820 502 ## COG1846 Transcriptional regulators - Term 372719 - 372776 0.6 349 169 Tu 1 . - CDS 372817 - 373773 1176 ## COG2215 ABC-type uncharacterized transport system, permease component 350 170 Op 1 . - CDS 373928 - 374917 940 ## Kvar_0785 hypothetical protein 351 170 Op 2 10/0.073 - CDS 374930 - 377410 2235 ## COG3188 P pilus assembly protein, porin PapC 352 170 Op 3 7/0.127 - CDS 377423 - 378106 388 ## COG3121 P pilus assembly protein, chaperone PapD - Term 378120 - 378159 8.6 353 170 Op 4 . - CDS 378168 - 378710 374 ## COG3539 P pilus assembly protein, pilin FimA + Prom 378981 - 379040 8.5 354 171 Tu 1 . + CDS 379060 - 379305 157 ## Kvar_0781 hypothetical protein + Prom 380027 - 380086 5.9 355 172 Tu 1 . + CDS 380134 - 380763 314 ## COG0582 Integrase 356 173 Tu 1 . + CDS 381227 - 381835 426 ## COG0582 Integrase 357 174 Op 1 4/0.380 + CDS 382316 - 382864 637 ## COG3539 P pilus assembly protein, pilin FimA + Term 382892 - 382920 -0.3 358 174 Op 2 7/0.127 + CDS 382935 - 383471 568 ## COG3539 P pilus assembly protein, pilin FimA 359 174 Op 3 10/0.073 + CDS 383530 - 384225 867 ## COG3121 P pilus assembly protein, chaperone PapD 360 174 Op 4 6/0.153 + CDS 384306 - 386921 3367 ## COG3188 P pilus assembly protein, porin PapC 361 174 Op 5 4/0.380 + CDS 386932 - 387459 591 ## COG3539 P pilus assembly protein, pilin FimA 362 174 Op 6 . + CDS 387472 - 387972 608 ## COG3539 P pilus assembly protein, pilin FimA 363 174 Op 7 . + CDS 387990 - 388895 966 ## Kvar_0772 FimH mannose-binding domain protein 364 174 Op 8 . + CDS 388895 - 390304 1117 ## COG2200 FOG: EAL domain + Term 390352 - 390387 3.5 - Term 390308 - 390339 4.1 365 175 Op 1 5/0.247 - CDS 390347 - 390619 356 ## COG2388 Predicted acetyltransferase 366 175 Op 2 . - CDS 390631 - 390861 303 ## COG3592 Uncharacterized conserved protein - Prom 390890 - 390949 3.3 + Prom 390836 - 390895 7.1 367 176 Op 1 . + CDS 391068 - 391340 146 ## KP1_4583 hypothetical protein 368 176 Op 2 6/0.153 + CDS 391347 - 392372 1590 ## COG1566 Multidrug resistance efflux pump 369 176 Op 3 2/0.600 + CDS 392385 - 394268 2367 ## COG1289 Predicted membrane protein 370 176 Op 4 . + CDS 394265 - 395713 1744 ## COG1538 Outer membrane protein - Term 395911 - 395945 5.2 371 177 Tu 1 . - CDS 395979 - 396278 355 ## Kvar_0764 hypothetical protein - Prom 396312 - 396371 4.1 - Term 396415 - 396453 6.3 372 178 Tu 1 . - CDS 396462 - 398015 2080 ## COG3104 Dipeptide/tripeptide permease - Prom 398231 - 398290 5.0 - Term 398242 - 398279 -0.9 373 179 Op 1 2/0.600 - CDS 398492 - 398914 422 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 374 179 Op 2 7/0.127 - CDS 398924 - 400216 1763 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 375 179 Op 3 . - CDS 400269 - 400598 241 ## COG0640 Predicted transcriptional regulators - Prom 400642 - 400701 3.3 + Prom 400549 - 400608 1.5 376 180 Op 1 . + CDS 400818 - 401111 306 ## COG2350 Uncharacterized protein conserved in bacteria 377 180 Op 2 . + CDS 401130 - 401702 469 ## COG3506 Uncharacterized conserved protein 378 181 Tu 1 . - CDS 401706 - 401981 132 ## Kvar_0757 hypothetical protein - Prom 402077 - 402136 3.8 - Term 402042 - 402081 -0.8 379 182 Tu 1 . - CDS 402151 - 403050 723 ## COG0583 Transcriptional regulator - Prom 403071 - 403130 3.8 + Prom 403096 - 403155 4.4 380 183 Op 1 . + CDS 403189 - 403497 372 ## Kvar_0755 hypothetical protein 381 183 Op 2 . + CDS 403500 - 404063 674 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 382 183 Op 3 1/0.707 + CDS 404084 - 405103 1154 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 383 183 Op 4 . + CDS 405136 - 405939 466 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 405947 - 405983 5.1 - Term 406031 - 406070 0.6 384 184 Tu 1 . - CDS 406300 - 407229 245 ## COG0583 Transcriptional regulator + Prom 407203 - 407262 2.7 385 185 Tu 1 . + CDS 407359 - 408747 854 ## COG0477 Permeases of the major facilitator superfamily - Term 408756 - 408808 0.1 386 186 Tu 1 . - CDS 409039 - 409911 -1 ## Sde_2749 hypothetical protein - Prom 410017 - 410076 1.6 387 187 Tu 1 . - CDS 410086 - 410544 80 ## COG1396 Predicted transcriptional regulators + Prom 410571 - 410630 2.6 388 188 Tu 1 . + CDS 410667 - 411161 277 ## ECs5251 hypothetical protein + Term 411322 - 411360 4.4 - Term 411310 - 411348 4.4 389 189 Tu 1 . - CDS 411401 - 411865 -203 ## RCAP_rcc00930 hypothetical protein 390 190 Tu 1 . - CDS 412783 - 413349 167 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 413382 - 413441 3.0 + Prom 413459 - 413518 3.0 391 191 Tu 1 . + CDS 413541 - 414008 87 ## COG4333 Uncharacterized protein conserved in bacteria + Term 414016 - 414056 2.1 392 192 Tu 1 . - CDS 414830 - 415030 61 ## - Prom 415254 - 415313 4.5 + Prom 415434 - 415493 3.7 393 193 Tu 1 . + CDS 415586 - 416158 222 ## gi|290511296|ref|ZP_06550665.1| conserved hypothetical protein + Prom 416499 - 416558 1.6 394 194 Tu 1 . + CDS 416591 - 416812 120 ## gi|317494169|ref|ZP_07952585.1| hypothetical protein HMPREF0864_03354 + Term 416822 - 416864 9.7 + Prom 417630 - 417689 2.0 395 195 Tu 1 . + CDS 417726 - 419159 76 ## RHECIAT_CH0000864 hypothetical protein + Term 419191 - 419222 2.1 + Prom 419176 - 419235 6.2 396 196 Tu 1 . + CDS 419461 - 419811 81 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 419978 - 420034 -1.0 - Term 420274 - 420310 4.1 397 197 Tu 1 . - CDS 420327 - 420518 142 ## gi|238792834|ref|ZP_04636465.1| Integrase 398 198 Tu 1 . - CDS 420636 - 421145 82 ## COG0582 Integrase - Prom 421314 - 421373 3.9 - TRNA 422348 - 422421 78.8 # Gly CCC 0 0 399 199 Tu 1 . - CDS 422502 - 423215 695 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 423258 - 423317 3.0 400 200 Tu 1 . + CDS 423529 - 424083 620 ## COG1443 Isopentenyldiphosphate isomerase + Term 424099 - 424136 4.5 - Term 424261 - 424303 9.3 401 201 Op 1 8/0.107 - CDS 424319 - 425836 2150 ## COG1190 Lysyl-tRNA synthetase (class II) 402 201 Op 2 5/0.247 - CDS 425846 - 426745 1244 ## COG1186 Protein chain release factor B - Term 426965 - 427022 2.7 403 202 Op 1 7/0.127 - CDS 427030 - 428763 2256 ## COG0608 Single-stranded DNA-specific exonuclease 404 202 Op 2 8/0.107 - CDS 428769 - 429464 1026 ## COG1651 Protein-disulfide isomerase 405 202 Op 3 . - CDS 429505 - 430401 1078 ## COG4974 Site-specific recombinase XerD - Prom 430424 - 430483 3.1 + Prom 430412 - 430471 2.7 406 203 Tu 1 . + CDS 430502 - 431023 901 ## COG0716 Flavodoxins 407 204 Op 1 . - CDS 431030 - 431440 397 ## Kvar_0741 hypothetical protein 408 204 Op 2 . - CDS 431421 - 431687 285 ## COG2938 Uncharacterized conserved protein - Prom 431710 - 431769 2.6 + Prom 431740 - 431799 5.4 409 205 Tu 1 . + CDS 431933 - 432916 1384 ## COG0354 Predicted aminomethyltransferase related to GcvT + Term 433142 - 433180 0.1 - Term 433125 - 433168 2.4 410 206 Tu 1 . - CDS 433176 - 433835 1157 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 433909 - 433968 4.3 411 207 Tu 1 . - CDS 433999 - 434310 334 ## COG3097 Uncharacterized protein conserved in bacteria - Prom 434554 - 434613 5.3 + Prom 434266 - 434325 3.8 412 208 Tu 1 . + CDS 434355 - 435089 879 ## COG1737 Transcriptional regulators + Term 435130 - 435175 -0.4 + Prom 435122 - 435181 4.9 413 209 Tu 1 . + CDS 435209 - 436642 2256 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Prom 436688 - 436747 3.3 414 210 Op 1 . + CDS 436767 - 437126 382 ## Kvar_0734 suppressor for copper-sensitivity A 415 210 Op 2 1/0.707 + CDS 437176 - 439185 2098 ## COG4232 Thiol:disulfide interchange protein 416 210 Op 3 2/0.600 + CDS 439187 - 439798 832 ## COG1651 Protein-disulfide isomerase 417 210 Op 4 . + CDS 439788 - 440291 367 ## COG0526 Thiol-disulfide isomerase and thioredoxins 418 211 Op 1 1/0.707 - CDS 440439 - 441182 256 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 441188 - 441221 4.7 419 211 Op 2 12/0.033 - CDS 441243 - 444116 4080 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 420 212 Op 1 18/0.000 - CDS 444322 - 444711 568 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 421 212 Op 2 5/0.247 - CDS 444736 - 445830 1444 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) - Term 446204 - 446233 1.1 422 213 Op 1 8/0.107 - CDS 446253 - 447455 1313 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 423 213 Op 2 8/0.107 - CDS 447466 - 448644 1231 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 424 213 Op 3 5/0.247 - CDS 448641 - 449957 1769 ## COG0006 Xaa-Pro aminopeptidase 425 213 Op 4 . - CDS 449981 - 450541 786 ## COG3079 Uncharacterized protein conserved in bacteria + Prom 450609 - 450668 2.8 426 214 Tu 1 . + CDS 450726 - 451055 162 ## COG3027 Uncharacterized protein conserved in bacteria + Prom 451289 - 451348 2.6 427 215 Tu 1 . + CDS 451379 - 451975 660 ## COG0212 5-formyltetrahydrofolate cyclo-ligase + Term 452103 - 452140 2.0 - Term 452010 - 452044 7.5 428 216 Tu 1 . - CDS 452059 - 453291 1592 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 453341 - 453400 5.0 + Prom 453150 - 453209 1.5 429 217 Tu 1 . + CDS 453263 - 453454 79 ## KP1_4636 hypothetical protein + Term 453526 - 453572 5.3 - Term 453515 - 453553 5.7 430 218 Tu 1 . - CDS 453561 - 454220 937 ## COG0120 Ribose 5-phosphate isomerase - Prom 454329 - 454388 5.6 + Prom 454298 - 454357 4.5 431 219 Tu 1 . + CDS 454388 - 455281 1120 ## COG0583 Transcriptional regulator + Term 455292 - 455338 11.2 - Term 455286 - 455318 4.0 432 220 Op 1 5/0.247 - CDS 455336 - 456103 843 ## COG2968 Uncharacterized conserved protein 433 220 Op 2 5/0.247 - CDS 456193 - 456828 887 ## COG1279 Lysine efflux permease - Prom 456856 - 456915 3.1 - Term 456930 - 456960 4.1 434 221 Tu 1 . - CDS 456980 - 457837 1336 ## COG0668 Small-conductance mechanosensitive channel - Prom 457939 - 457998 4.6 - Term 457972 - 458007 5.8 435 222 Op 1 9/0.100 - CDS 458029 - 459108 1344 ## COG0191 Fructose/tagatose bisphosphate aldolase - Term 459166 - 459198 5.0 436 222 Op 2 26/0.000 - CDS 459206 - 460369 1447 ## COG0126 3-phosphoglycerate kinase 437 222 Op 3 . - CDS 460409 - 461437 1081 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 461569 - 461628 3.8 + Prom 463509 - 463568 5.5 438 223 Tu 1 . + CDS 463635 - 464393 1061 ## COG0501 Zn-dependent protease with chaperone function + Term 464402 - 464433 2.4 + Prom 464494 - 464553 6.0 439 224 Tu 1 . + CDS 464771 - 466039 1556 ## KPK_0739 porin D (EC:3.4.21.-) + Term 466155 - 466182 -0.1 440 225 Tu 1 5/0.247 - CDS 466171 - 467091 1245 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family - Prom 467125 - 467184 9.0 - Term 467132 - 467176 6.5 441 226 Tu 1 . - CDS 467325 - 469223 2756 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) - Prom 469313 - 469372 3.4 + Prom 469835 - 469894 3.9 442 227 Tu 1 . + CDS 470143 - 471297 1629 ## COG0192 S-adenosylmethionine synthetase + Term 471318 - 471350 3.0 + Prom 471481 - 471540 6.6 443 228 Tu 1 . + CDS 471677 - 473071 2130 ## COG0477 Permeases of the major facilitator superfamily + Term 473081 - 473117 7.2 444 229 Tu 1 6/0.153 + CDS 473191 - 473649 518 ## COG3091 Uncharacterized protein conserved in bacteria + Prom 473663 - 473722 2.5 445 230 Op 1 3/0.473 + CDS 473744 - 474451 868 ## COG2356 Endonuclease I 446 230 Op 2 2/0.600 + CDS 474543 - 475274 698 ## COG1385 Uncharacterized protein conserved in bacteria 447 230 Op 3 2/0.600 + CDS 475295 - 476245 340 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme + Prom 476328 - 476387 2.8 448 231 Op 1 8/0.107 + CDS 476419 - 476982 733 ## COG1678 Putative transcriptional regulator 449 231 Op 2 . + CDS 476982 - 477398 431 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 477527 - 477559 1.9 450 232 Tu 1 . - CDS 477451 - 478104 429 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 478151 - 478210 10.4 - Term 478159 - 478209 5.3 451 233 Tu 1 . - CDS 478453 - 479433 730 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT - Prom 479636 - 479695 1.7 + Prom 479366 - 479425 2.9 452 234 Op 1 5/0.247 + CDS 479450 - 480151 528 ## COG0325 Predicted enzyme with a TIM-barrel fold 453 234 Op 2 6/0.153 + CDS 480172 - 480738 868 ## COG0762 Predicted integral membrane protein 454 234 Op 3 2/0.600 + CDS 480735 - 481025 217 ## COG1872 Uncharacterized conserved protein 455 234 Op 4 13/0.027 + CDS 481038 - 481631 947 ## PROTEIN SUPPORTED gi|24114209|ref|NP_708719.1| putative deoxyribonucleotide triphosphate pyrophosphatase 456 234 Op 5 . + CDS 481624 - 482760 1467 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 482768 - 482807 5.1 457 235 Tu 1 . - CDS 482801 - 483517 1058 ## Kvar_0691 hypothetical protein - Term 483529 - 483561 4.1 458 236 Op 1 4/0.380 - CDS 483571 - 483897 544 ## COG3171 Uncharacterized protein conserved in bacteria 459 236 Op 2 . - CDS 483897 - 484616 875 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 484650 - 484709 3.4 + Prom 484609 - 484668 3.0 460 237 Op 1 11/0.040 + CDS 484705 - 485811 1083 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 461 237 Op 2 6/0.153 + CDS 485840 - 486115 431 ## COG2924 Fe-S cluster protector protein 462 237 Op 3 4/0.380 + CDS 486161 - 487246 1250 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 487262 - 487295 1.1 + Prom 487262 - 487321 5.1 463 238 Tu 1 . + CDS 487438 - 488691 1941 ## COG0477 Permeases of the major facilitator superfamily + Term 488701 - 488746 9.0 - Term 488693 - 488729 6.1 464 239 Tu 1 . - CDS 488735 - 490864 2615 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 490888 - 490947 3.0 + Prom 491205 - 491264 2.9 465 240 Tu 1 . + CDS 491293 - 492006 674 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 492134 - 492200 30.0 + TRNA 492112 - 492187 84.1 # Phe GAA 0 0 - Term 492293 - 492327 2.1 466 241 Tu 1 . - CDS 492411 - 492851 116 ## COG0582 Integrase - Term 493557 - 493596 -0.9 467 242 Op 1 . - CDS 493599 - 493874 164 ## PMI0321 hypothetical protein 468 242 Op 2 . - CDS 493926 - 494354 177 ## PMI0320 hypothetical protein - Prom 494374 - 494433 2.0 469 243 Tu 1 . - CDS 494551 - 494841 237 ## ECED1_3573 hypothetical protein 470 244 Op 1 3/0.473 - CDS 495350 - 496498 426 ## COG4924 Uncharacterized protein conserved in bacteria 471 244 Op 2 . - CDS 496499 - 499789 2092 ## COG4913 Uncharacterized protein conserved in bacteria 472 244 Op 3 . - CDS 499786 - 500535 442 ## CJA_1586 hypothetical protein 473 244 Op 4 . - CDS 500541 - 502037 861 ## PA14_03250 hypothetical protein - Prom 502077 - 502136 4.5 + Prom 502763 - 502822 3.7 474 245 Op 1 8/0.107 + CDS 502910 - 504280 1471 ## COG0031 Cysteine synthase 475 245 Op 2 . + CDS 504292 - 505440 1398 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 476 246 Tu 1 . - CDS 505441 - 506352 1263 ## COG0583 Transcriptional regulator - Prom 506385 - 506444 3.7 + Prom 506333 - 506392 2.6 477 247 Op 1 . + CDS 506450 - 507052 884 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 507089 - 507128 2.1 + Prom 507056 - 507115 1.6 478 247 Op 2 . + CDS 507139 - 507483 183 ## Kvar_0678 hypothetical protein + Prom 507598 - 507657 7.2 479 248 Op 1 . + CDS 507682 - 507870 155 ## KP1_4689 hypothetical protein 480 248 Op 2 . + CDS 507891 - 507980 90 ## 481 249 Tu 1 . - CDS 508067 - 509248 1658 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 482 250 Tu 1 . - CDS 509394 - 511259 2346 ## COG0754 Glutathionylspermidine synthase - Prom 511389 - 511448 3.7 + Prom 511381 - 511440 3.9 483 251 Op 1 . + CDS 511479 - 512039 811 ## Kvar_0674 hypothetical protein 484 251 Op 2 . + CDS 512087 - 512953 1078 ## COG0625 Glutathione S-transferase + Term 512995 - 513036 8.0 - Term 512790 - 512818 1.4 485 252 Op 1 . - CDS 513026 - 513313 400 ## Kvar_0672 hypothetical protein 486 252 Op 2 . - CDS 513392 - 514279 924 ## COG0412 Dienelactone hydrolase and related enzymes - Term 514358 - 514391 4.3 487 253 Tu 1 . - CDS 514402 - 514896 750 ## COG2862 Predicted membrane protein - Prom 514921 - 514980 6.3 - Term 514984 - 515016 2.1 488 254 Op 1 30/0.000 - CDS 515037 - 515462 641 ## COG0848 Biopolymer transport protein 489 254 Op 2 . - CDS 515469 - 516185 1004 ## COG0811 Biopolymer transport proteins - Prom 516405 - 516464 4.0 + Prom 516239 - 516298 4.9 490 255 Tu 1 . + CDS 516451 - 517638 1469 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Term 517662 - 517702 4.2 491 256 Tu 1 . + CDS 517770 - 518429 821 ## COG0586 Uncharacterized membrane-associated protein + Term 518671 - 518702 -0.7 - Term 518315 - 518354 -0.9 492 257 Tu 1 . - CDS 518479 - 519378 930 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 519428 - 519487 1.6 + Prom 519460 - 519519 2.5 493 258 Tu 1 . + CDS 519575 - 520738 1657 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 520756 - 520805 11.1 494 259 Tu 1 . + CDS 520884 - 521711 1077 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 521723 - 521761 4.4 - Term 521707 - 521753 9.0 495 260 Tu 1 . - CDS 521798 - 523981 2783 ## COG1032 Fe-S oxidoreductase - Prom 524019 - 524078 7.2 496 261 Op 1 7/0.127 - CDS 524105 - 525517 1967 ## COG2132 Putative multicopper oxidases 497 261 Op 2 5/0.247 - CDS 525601 - 526311 824 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 526360 - 526419 1.5 498 262 Tu 1 1/0.707 - CDS 526530 - 528788 2949 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 528837 - 528896 3.8 - Term 528839 - 528887 12.4 499 263 Op 1 3/0.473 - CDS 528910 - 529779 563 ## COG3449 DNA gyrase inhibitor 500 263 Op 2 . - CDS 529857 - 530264 553 ## COG3111 Uncharacterized conserved protein - Prom 530336 - 530395 6.5 501 264 Op 1 40/0.000 + CDS 530414 - 531073 853 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 502 264 Op 2 2/0.600 + CDS 531070 - 532419 1445 ## COG0642 Signal transduction histidine kinase + Prom 532441 - 532500 4.5 503 265 Op 1 4/0.380 + CDS 532526 - 533107 806 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 504 265 Op 2 . + CDS 533189 - 533503 441 ## COG1359 Uncharacterized conserved protein + Term 533533 - 533561 3.0 - Term 533521 - 533549 3.0 505 266 Op 1 7/0.127 - CDS 533576 - 535471 2729 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 506 266 Op 2 7/0.127 - CDS 535502 - 536077 622 ## COG3150 Predicted esterase 507 266 Op 3 7/0.127 - CDS 536077 - 536904 596 ## COG1409 Predicted phosphohydrolases 508 266 Op 4 8/0.107 - CDS 536929 - 537351 203 ## COG3151 Uncharacterized protein conserved in bacteria 509 266 Op 5 . - CDS 537348 - 537980 687 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 538131 - 538190 5.7 + Prom 538066 - 538125 2.4 510 267 Tu 1 . + CDS 538177 - 539649 1870 ## COG1538 Outer membrane protein + Prom 539721 - 539780 3.8 511 268 Op 1 5/0.247 + CDS 539817 - 540488 663 ## COG5463 Predicted integral membrane protein 512 268 Op 2 . + CDS 540494 - 541654 1718 ## COG0754 Glutathionylspermidine synthase - Term 541644 - 541688 13.5 513 269 Tu 1 . - CDS 541695 - 542486 1027 ## COG3384 Uncharacterized conserved protein - Prom 542534 - 542593 3.0 + Prom 542498 - 542557 1.8 514 270 Tu 1 . + CDS 542673 - 543443 1127 ## COG0428 Predicted divalent heavy-metal cations transporter - Term 543443 - 543482 9.1 515 271 Tu 1 . - CDS 543505 - 544158 917 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Prom 544451 - 544510 2.5 516 272 Tu 1 . + CDS 544536 - 544808 435 ## COG2960 Uncharacterized protein conserved in bacteria + Term 544813 - 544842 3.5 - Term 544801 - 544830 3.5 517 273 Tu 1 . - CDS 544844 - 545041 121 ## Kvar_0640 glycogen synthesis protein - Prom 545143 - 545202 5.7 - Term 545182 - 545221 10.5 518 274 Op 1 5/0.247 - CDS 545260 - 546693 2111 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 519 274 Op 2 5/0.247 - CDS 546752 - 549586 3776 ## COG1391 Glutamine synthetase adenylyltransferase 520 274 Op 3 . - CDS 549610 - 550908 1533 ## COG3025 Uncharacterized conserved protein - Prom 551094 - 551153 3.6 + Prom 551038 - 551097 3.4 521 275 Op 1 7/0.127 + CDS 551123 - 551743 761 ## COG3103 SH3 domain protein 522 275 Op 2 . + CDS 551805 - 553046 1603 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 553010 - 553052 8.1 523 276 Op 1 . - CDS 553058 - 553879 1226 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 553918 - 553977 2.1 - Term 554022 - 554067 -0.9 524 276 Op 2 . - CDS 554077 - 554460 416 ## COG1539 Dihydroneopterin aldolase - Prom 554509 - 554568 2.6 + Prom 554468 - 554527 2.2 525 277 Tu 1 . + CDS 554568 - 555185 733 ## COG0344 Predicted membrane protein + Term 555208 - 555237 -0.5 + Prom 555472 - 555531 4.2 526 278 Op 1 8/0.107 + CDS 555583 - 556407 739 ## COG0829 Urease accessory protein UreH 527 278 Op 2 13/0.027 + CDS 556417 - 556719 518 ## COG0831 Urea amidohydrolase (urease) gamma subunit 528 278 Op 3 17/0.000 + CDS 556729 - 557049 324 ## COG0832 Urea amidohydrolase (urease) beta subunit 529 278 Op 4 10/0.073 + CDS 557042 - 558745 2328 ## COG0804 Urea amidohydrolase (urease) alpha subunit 530 278 Op 5 16/0.000 + CDS 558755 - 559231 601 ## COG2371 Urease accessory protein UreE 531 278 Op 6 17/0.000 + CDS 559233 - 559907 709 ## COG0830 Urease accessory protein UreF 532 278 Op 7 . + CDS 559916 - 560533 1110 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase + Term 560537 - 560595 8.2 533 279 Tu 1 . + CDS 560686 - 562293 2373 ## Kvar_0624 permease for cytosine/purines uracil thiamine allantoin + Term 562303 - 562337 8.3 - Term 562291 - 562325 8.3 534 280 Tu 1 . - CDS 562338 - 563351 663 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase - Prom 563520 - 563579 3.8 + Prom 563394 - 563453 5.6 535 281 Tu 1 . + CDS 563589 - 563804 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 + Term 563851 - 563891 6.1 + Prom 563833 - 563892 2.6 536 282 Op 1 31/0.000 + CDS 563916 - 565661 1677 ## COG0358 DNA primase (bacterial type) 537 282 Op 2 . + CDS 565880 - 567721 2699 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 567756 - 567784 1.0 - Term 567743 - 567771 1.0 538 283 Tu 1 . - CDS 567821 - 568327 509 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 568471 - 568530 79.6 + TRNA 568452 - 568527 89.9 # Met CAT 0 0 - Term 568580 - 568622 -1.0 539 284 Tu 1 . - CDS 568687 - 569259 585 ## Kvar_0618 hypothetical protein - Prom 569463 - 569522 2.9 + Prom 570662 - 570721 2.4 540 285 Tu 1 . + CDS 570791 - 571180 174 ## COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II + Prom 571281 - 571340 2.6 541 286 Tu 1 . + CDS 571361 - 571723 404 ## KPK_0637 putative lipoprotein + Term 571844 - 571884 1.6 - Term 571574 - 571627 -0.5 542 287 Tu 1 . - CDS 571792 - 572157 338 ## KPK_0636 HdeB family protein - Prom 572328 - 572387 2.9 + Prom 572188 - 572247 6.1 543 288 Op 1 5/0.247 + CDS 572458 - 573072 784 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 544 288 Op 2 . + CDS 573077 - 576319 3308 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 576534 - 576574 -1.0 545 289 Tu 1 . - CDS 576410 - 577042 957 ## Kvar_0610 hypothetical protein - Prom 577080 - 577139 3.5 + Prom 577171 - 577230 5.1 546 290 Op 1 . + CDS 577310 - 577885 422 ## COG3247 Uncharacterized conserved protein 547 290 Op 2 . + CDS 577912 - 578217 460 ## Kvar_0608 acid-resistance protein + Term 578241 - 578283 8.2 - Term 578207 - 578246 3.9 548 291 Op 1 . - CDS 578273 - 579076 1023 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 549 291 Op 2 . - CDS 579130 - 580953 2339 ## KPN_03486 glycerol dehyrdratase activator 550 291 Op 3 1/0.707 - CDS 580966 - 581391 736 ## COG4910 Propanediol dehydratase, small subunit 551 291 Op 4 . - CDS 581394 - 581978 649 ## COG4909 Propanediol dehydratase, large subunit 552 291 Op 5 . - CDS 581991 - 583658 2152 ## COG4909 Propanediol dehydratase, large subunit - Prom 583845 - 583904 9.8 + Prom 583829 - 583888 5.3 553 292 Op 1 . + CDS 583952 - 584500 378 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 554 292 Op 2 . + CDS 584522 - 585685 1593 ## COG1454 Alcohol dehydrogenase, class IV 555 292 Op 3 . + CDS 585706 - 586059 283 ## KP1_4786 glycerol dehydratase-reactivation factor 556 292 Op 4 . + CDS 586060 - 586590 752 ## COG2096 Uncharacterized conserved protein + Term 586828 - 586859 -0.7 - Term 586352 - 586378 -0.3 557 293 Tu 1 . - CDS 586568 - 588493 2302 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism - Term 588548 - 588579 2.3 558 294 Tu 1 . - CDS 588595 - 589692 1553 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 589852 - 589911 3.8 + Prom 590119 - 590178 2.5 559 295 Op 1 10/0.073 + CDS 590302 - 591372 1509 ## COG2376 Dihydroxyacetone kinase 560 295 Op 2 2/0.600 + CDS 591383 - 592015 879 ## COG2376 Dihydroxyacetone kinase 561 295 Op 3 2/0.600 + CDS 592026 - 593447 1598 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 593463 - 593509 14.2 562 296 Tu 1 . + CDS 593523 - 595172 2066 ## COG2376 Dihydroxyacetone kinase + Term 595329 - 595369 3.6 - Term 595267 - 595307 6.1 563 297 Tu 1 . - CDS 595376 - 596152 1122 ## COG2375 Siderophore-interacting protein - Prom 596297 - 596356 7.0 + Prom 596308 - 596367 7.1 564 298 Tu 1 . + CDS 596390 - 596944 706 ## COG1695 Predicted transcriptional regulators + Prom 597030 - 597089 3.1 565 299 Tu 1 . + CDS 597292 - 598581 1636 ## COG4992 Ornithine/acetylornithine aminotransferase - Term 598574 - 598622 17.7 566 300 Op 1 5/0.247 - CDS 598629 - 598925 522 ## COG1359 Uncharacterized conserved protein 567 300 Op 2 6/0.153 - CDS 598922 - 599809 1359 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 568 300 Op 3 16/0.000 - CDS 599821 - 600834 1668 ## COG1879 ABC-type sugar transport system, periplasmic component 569 300 Op 4 11/0.040 - CDS 600831 - 601835 1423 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 570 300 Op 5 21/0.000 - CDS 601836 - 602870 1589 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 571 300 Op 6 . - CDS 602867 - 604354 1804 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 604548 - 604607 3.5 + Prom 604494 - 604553 3.9 572 301 Op 1 5/0.247 + CDS 604573 - 605544 1329 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 573 301 Op 2 1/0.707 + CDS 605582 - 606301 954 ## COG1070 Sugar (pentulose and hexulose) kinases + Prom 607032 - 607091 80.4 574 302 Op 1 . + CDS 607141 - 607980 822 ## COG1070 Sugar (pentulose and hexulose) kinases + Prom 608063 - 608122 6.0 575 302 Op 2 . + CDS 608162 - 610183 2418 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 610400 - 610445 -1.0 576 303 Op 1 . - CDS 610293 - 611423 487 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Term 611440 - 611476 0.7 577 303 Op 2 . - CDS 611500 - 612840 544 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 - Prom 612877 - 612936 3.8 + Prom 612866 - 612925 3.5 578 304 Tu 1 . + CDS 612949 - 613815 581 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 613817 - 613864 1.1 + Prom 613858 - 613917 5.3 579 305 Op 1 . + CDS 613945 - 615588 1029 ## COG3507 Beta-xylosidase 580 305 Op 2 1/0.707 + CDS 615667 - 616167 620 ## COG1451 Predicted metal-dependent hydrolase 581 306 Tu 1 3/0.473 + CDS 616241 - 617230 1104 ## COG0673 Predicted dehydrogenases and related proteins + Term 617292 - 617332 -0.9 + Prom 617233 - 617292 3.7 582 307 Tu 1 . + CDS 617502 - 618473 1306 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 618486 - 618521 7.2 + Prom 618517 - 618576 4.1 583 308 Tu 1 . + CDS 618705 - 619952 1914 ## COG3633 Na+/serine symporter + Term 619960 - 619996 7.4 - Term 619908 - 619952 0.3 584 309 Tu 1 . - CDS 619968 - 620522 592 ## Kvar_0581 hypothetical protein - Term 620537 - 620575 6.0 585 310 Op 1 3/0.473 - CDS 620652 - 622139 1702 ## COG2721 Altronate dehydratase 586 310 Op 2 . - CDS 622158 - 623570 1944 ## COG1904 Glucuronate isomerase - Prom 623686 - 623745 4.0 + Prom 623781 - 623840 3.5 587 311 Tu 1 . + CDS 624053 - 625354 1833 ## COG0477 Permeases of the major facilitator superfamily + Term 625381 - 625414 4.5 + Prom 625394 - 625453 1.9 588 312 Tu 1 . + CDS 625482 - 626258 928 ## COG2186 Transcriptional regulators + Term 626456 - 626494 2.0 + Prom 626385 - 626444 4.4 589 313 Op 1 . + CDS 626600 - 627262 720 ## COG0586 Uncharacterized membrane-associated protein 590 313 Op 2 . + CDS 627265 - 627648 487 ## Kvar_0574 hypothetical protein + Term 627653 - 627697 2.8 + Prom 627653 - 627712 2.7 591 314 Op 1 . + CDS 627798 - 628166 336 ## KPN_03525 hypothetical protein 592 314 Op 2 7/0.127 + CDS 628212 - 628517 372 ## COG4575 Uncharacterized conserved protein 593 314 Op 3 . + CDS 628559 - 628918 399 ## COG5393 Predicted membrane protein 594 314 Op 4 . + CDS 628915 - 629211 162 ## Kvar_0570 hypothetical protein + Term 629214 - 629266 7.2 + Prom 629428 - 629487 4.1 595 315 Op 1 3/0.473 + CDS 629568 - 629960 533 ## COG2259 Predicted membrane protein + Term 629992 - 630023 3.2 596 315 Op 2 4/0.380 + CDS 630036 - 631022 1246 ## COG0435 Predicted glutathione S-transferase + Term 631102 - 631143 0.5 + Prom 631045 - 631104 4.3 597 316 Tu 1 . + CDS 631149 - 631517 501 ## COG3152 Predicted membrane protein + Term 631523 - 631563 11.2 - Term 631470 - 631503 2.6 598 317 Tu 1 . - CDS 631559 - 632455 1105 ## COG0583 Transcriptional regulator - Prom 632484 - 632543 2.6 + Prom 632479 - 632538 2.6 599 318 Op 1 . + CDS 632560 - 633261 659 ## COG1741 Pirin-related protein 600 318 Op 2 . + CDS 633286 - 633453 132 ## Kvar_0564 hypothetical protein + Term 633500 - 633537 6.9 - Term 633489 - 633521 5.0 601 319 Tu 1 . - CDS 633527 - 633937 462 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 633973 - 634032 9.7 + Prom 634170 - 634229 6.8 602 320 Tu 1 . + CDS 634249 - 634713 512 ## KPK_0575 putative lipoprotein + Term 634798 - 634825 -0.1 603 321 Tu 1 . - CDS 634784 - 634996 78 ## - Prom 635049 - 635108 80.4 604 322 Tu 1 1/0.707 - CDS 636108 - 637253 1025 ## COG1929 Glycerate kinase - Term 637283 - 637311 1.3 605 323 Op 1 1/0.707 - CDS 637318 - 638208 1296 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 606 323 Op 2 6/0.153 - CDS 638235 - 639005 890 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 607 323 Op 3 . - CDS 639032 - 640363 1552 ## COG0477 Permeases of the major facilitator superfamily - Prom 640475 - 640534 5.5 + Prom 640671 - 640730 3.3 608 324 Tu 1 . + CDS 640756 - 642327 1829 ## COG2721 Altronate dehydratase + Term 642357 - 642386 2.8 609 325 Op 1 3/0.473 - CDS 642382 - 643332 1083 ## COG0524 Sugar kinases, ribokinase family 610 325 Op 2 . - CDS 643332 - 644171 647 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 644314 - 644373 6.1 + Prom 644230 - 644289 8.1 611 326 Op 1 2/0.600 + CDS 644484 - 645338 1011 ## COG0191 Fructose/tagatose bisphosphate aldolase 612 326 Op 2 19/0.000 + CDS 645363 - 646277 639 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 613 326 Op 3 1/0.707 + CDS 646288 - 647700 1396 ## COG1299 Phosphotransferase system, fructose-specific IIC component 614 326 Op 4 1/0.707 + CDS 647711 - 648526 813 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain + Term 648545 - 648580 2.2 + Prom 648557 - 648616 2.7 615 327 Op 1 4/0.380 + CDS 648703 - 649974 1409 ## COG4573 Predicted tagatose 6-phosphate kinase 616 327 Op 2 13/0.027 + CDS 649989 - 650456 433 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 617 327 Op 3 10/0.073 + CDS 650483 - 650767 413 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 618 327 Op 4 7/0.127 + CDS 650773 - 652155 1595 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 619 327 Op 5 3/0.473 + CDS 652205 - 653248 1049 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 653277 - 653336 3.2 620 328 Tu 1 . + CDS 653359 - 654132 758 ## COG1349 Transcriptional regulators of sugar metabolism + Term 654155 - 654200 1.6 621 329 Op 1 . - CDS 654167 - 655168 290 ## COG3177 Uncharacterized conserved protein 622 329 Op 2 . - CDS 655172 - 656035 1229 ## COG0313 Predicted methyltransferases - Prom 656092 - 656151 3.8 + Prom 656011 - 656070 4.5 623 330 Op 1 10/0.073 + CDS 656099 - 658207 1886 ## COG3107 Putative lipoprotein 624 330 Op 2 11/0.040 + CDS 658165 - 658551 228 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 625 330 Op 3 11/0.040 + CDS 658577 - 659167 614 ## COG0279 Phosphoheptose isomerase 626 330 Op 4 . + CDS 659177 - 659752 755 ## COG2823 Predicted periplasmic or secreted lipoprotein 627 331 Op 1 2/0.600 - CDS 659870 - 660910 1401 ## COG0701 Predicted permeases 628 331 Op 2 . - CDS 660986 - 661633 660 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 661764 - 661823 2.3 629 332 Tu 1 . + CDS 661762 - 662298 502 ## COG0693 Putative intracellular protease/amidase + Term 662409 - 662434 -0.5 - Term 662196 - 662220 -1.0 630 333 Tu 1 . - CDS 662260 - 662703 614 ## COG3787 Uncharacterized protein conserved in bacteria 631 334 Tu 1 . + CDS 662723 - 663043 135 ## COG2827 Predicted endonuclease containing a URI domain 632 335 Op 1 6/0.153 - CDS 663030 - 663533 605 ## COG3153 Predicted acetyltransferase 633 335 Op 2 . - CDS 663527 - 664051 704 ## COG3154 Putative lipid carrier protein - Prom 664263 - 664322 3.2 + Prom 664166 - 664225 3.8 634 336 Op 1 13/0.027 + CDS 664273 - 665268 1214 ## COG0826 Collagenase and related proteases 635 336 Op 2 2/0.600 + CDS 665274 - 666152 1171 ## COG0826 Collagenase and related proteases 636 337 Tu 1 . + CDS 666296 - 667303 1199 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 667316 - 667351 5.2 - Term 667300 - 667341 3.1 637 338 Tu 1 . - CDS 667348 - 668592 1976 ## COG0814 Amino acid permeases - Prom 668634 - 668693 7.0 - Term 668658 - 668711 8.4 638 339 Tu 1 . - CDS 668736 - 670667 2316 ## COG0513 Superfamily II DNA and RNA helicases - Prom 670716 - 670775 5.1 - Term 670775 - 670811 1.3 639 340 Tu 1 . - CDS 670845 - 671591 530 ## COG4785 Lipoprotein NlpI, contains TPR repeats - Term 671792 - 671826 7.0 640 341 Tu 1 . - CDS 671838 - 673973 2033 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase 641 342 Tu 1 . + CDS 673932 - 674144 130 ## KPK_0550 hypothetical protein + Term 674180 - 674207 1.5 - Term 674168 - 674195 1.5 642 343 Tu 1 14/0.027 - CDS 674216 - 674485 442 ## PROTEIN SUPPORTED gi|206580210|ref|YP_002236424.1| ribosomal protein S15 - Prom 674554 - 674613 4.3 - Term 674503 - 674542 1.0 643 344 Op 1 26/0.000 - CDS 674634 - 675578 1276 ## COG0130 Pseudouridine synthase 644 344 Op 2 32/0.000 - CDS 675578 - 675979 745 ## COG0858 Ribosome-binding factor A - Prom 676017 - 676076 2.1 - Term 675988 - 676030 4.0 645 344 Op 3 20/0.000 - CDS 676082 - 678772 3074 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 646 344 Op 4 32/0.000 - CDS 678797 - 680284 1049 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 647 344 Op 5 . - CDS 680312 - 680734 324 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 680785 - 680844 5.1 - TRNA 680973 - 681049 86.1 # Met CAT 0 0 + Prom 681222 - 681281 3.9 648 345 Tu 1 . + CDS 681357 - 682700 1950 ## COG0137 Argininosuccinate synthase + Term 682724 - 682755 5.5 + Prom 682727 - 682786 4.8 649 346 Tu 1 . + CDS 682872 - 683501 632 ## Kvar_0517 Crp/Fnr family transcriptional regulator 650 347 Tu 1 . + CDS 683851 - 684402 617 ## KPK_0539 outer membrane protein + Term 684411 - 684448 6.2 651 348 Tu 1 . - CDS 684444 - 684845 363 ## KPK_0538 hypothetical protein - Prom 684873 - 684932 5.5 - TRNA 684990 - 685076 69.1 # Leu GAG 0 0 - Term 684940 - 684981 8.3 652 349 Tu 1 . - CDS 685086 - 685415 264 ## COG1314 Preprotein translocase subunit SecG - Prom 685544 - 685603 5.5 - Term 685593 - 685620 1.5 653 350 Op 1 9/0.100 - CDS 685645 - 686982 1824 ## COG1109 Phosphomannomutase 654 350 Op 2 7/0.127 - CDS 686975 - 687823 854 ## COG0294 Dihydropteroate synthase and related enzymes - Term 687851 - 687885 6.1 655 351 Op 1 13/0.027 - CDS 687922 - 689865 1680 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 689895 - 689954 4.2 656 351 Op 2 . - CDS 689956 - 690585 325 ## COG0293 23S rRNA methylase - Prom 690660 - 690719 2.8 + Prom 690619 - 690678 3.5 657 352 Tu 1 . + CDS 690709 - 691002 440 ## PROTEIN SUPPORTED gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein + Term 691086 - 691125 7.4 - Term 691081 - 691107 1.7 658 353 Tu 1 . - CDS 691155 - 691631 699 ## COG0782 Transcription elongation factor - Prom 691766 - 691825 4.6 + Prom 691599 - 691658 4.2 659 354 Tu 1 . + CDS 691867 - 693300 1334 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) + Term 693308 - 693340 6.3 - Term 693289 - 693334 13.1 660 355 Op 1 6/0.153 - CDS 693352 - 694530 837 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 661 355 Op 2 6/0.153 - CDS 694546 - 695511 751 ## PROTEIN SUPPORTED gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 695537 - 695596 3.4 - Term 695520 - 695591 15.0 662 356 Op 1 32/0.000 - CDS 695604 - 695861 437 ## PROTEIN SUPPORTED gi|152972109|ref|YP_001337255.1| 50S ribosomal protein L27 663 356 Op 2 . - CDS 695882 - 696193 524 ## PROTEIN SUPPORTED gi|152972110|ref|YP_001337256.1| 50S ribosomal protein L21 - Prom 696258 - 696317 3.8 + Prom 696193 - 696252 3.5 664 357 Tu 1 . + CDS 696454 - 697425 1300 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 697519 - 697578 4.2 665 358 Tu 1 . + CDS 697622 - 697894 249 ## COG3423 Predicted transcriptional regulator + Term 698131 - 698169 2.1 - Term 697891 - 697939 7.3 666 359 Op 1 11/0.040 - CDS 697949 - 699208 1683 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Term 699227 - 699261 3.8 667 359 Op 2 6/0.153 - CDS 699262 - 699516 346 ## COG5007 Predicted transcriptional regulator, BolA superfamily - Prom 699546 - 699605 3.8 - Term 699574 - 699622 5.8 668 360 Op 1 10/0.073 - CDS 699653 - 699943 378 ## COG3113 Predicted NTP binding protein (contains STAS domain) 669 360 Op 2 13/0.027 - CDS 699943 - 700578 1131 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 670 360 Op 3 16/0.000 - CDS 700597 - 701148 719 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 671 360 Op 4 23/0.000 - CDS 701153 - 701935 892 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 672 360 Op 5 . - CDS 701943 - 702755 249 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 702823 - 702882 4.4 + Prom 702843 - 702902 4.7 673 361 Op 1 6/0.153 + CDS 702965 - 703942 1189 ## COG0530 Ca2+/Na+ antiporter 674 361 Op 2 13/0.027 + CDS 703957 - 704943 985 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 675 361 Op 3 11/0.040 + CDS 704958 - 705524 695 ## COG1778 Low specificity phosphatase (HAD superfamily) 676 361 Op 4 12/0.033 + CDS 705521 - 706096 517 ## COG3117 Uncharacterized protein conserved in bacteria 677 361 Op 5 19/0.000 + CDS 706065 - 706610 659 ## COG1934 Uncharacterized protein conserved in bacteria 678 361 Op 6 17/0.000 + CDS 706617 - 707342 291 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 679 361 Op 7 11/0.040 + CDS 707390 - 708823 1533 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 680 361 Op 8 11/0.040 + CDS 708846 - 709133 435 ## PROTEIN SUPPORTED gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 681 361 Op 9 8/0.107 + CDS 709207 - 709692 497 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 682 361 Op 10 7/0.127 + CDS 709738 - 710592 1122 ## COG1660 Predicted P-loop-containing kinase 683 361 Op 11 . + CDS 710589 - 710861 360 ## COG1925 Phosphotransferase system, HPr-related proteins 684 362 Op 1 3/0.473 - CDS 710925 - 711650 779 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 685 362 Op 2 2/0.600 - CDS 711647 - 712300 978 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis - Prom 712363 - 712422 7.0 - Term 712460 - 712502 0.7 686 363 Tu 1 . - CDS 712534 - 714873 3205 ## COG0642 Signal transduction histidine kinase 687 364 Tu 1 . - CDS 715023 - 716105 1225 ## COG1312 D-mannonate dehydratase - Prom 716239 - 716298 4.5 + Prom 716198 - 716257 8.9 688 365 Op 1 7/0.127 + CDS 716376 - 717392 953 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 689 365 Op 2 . + CDS 717479 - 718762 1285 ## COG0477 Permeases of the major facilitator superfamily + Term 718774 - 718817 8.4 - Term 718752 - 718806 3.0 690 366 Tu 1 . - CDS 718809 - 719720 794 ## COG1242 Predicted Fe-S oxidoreductase 691 367 Tu 1 . - CDS 720283 - 720540 98 ## SPAB_04153 hypothetical protein + Prom 720237 - 720296 2.3 692 368 Op 1 21/0.000 + CDS 720418 - 724878 5784 ## COG0069 Glutamate synthase domain 2 693 368 Op 2 . + CDS 724888 - 726306 1844 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 726334 - 726369 6.5 - Term 726322 - 726357 5.7 694 369 Tu 1 . - CDS 726362 - 727066 731 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase - Term 727147 - 727180 4.5 695 370 Op 1 13/0.027 - CDS 727186 - 727680 586 ## COG2969 Stringent starvation protein B 696 370 Op 2 6/0.153 - CDS 727684 - 728322 657 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Prom 728467 - 728526 3.5 - Term 728572 - 728597 -0.5 697 371 Op 1 59/0.000 - CDS 728634 - 729026 652 ## PROTEIN SUPPORTED gi|16762104|ref|NP_457721.1| 30S ribosomal protein S9 698 371 Op 2 5/0.247 - CDS 729042 - 729545 877 ## PROTEIN SUPPORTED gi|238896727|ref|YP_002921472.1| ribosomal protein L13 - Prom 729627 - 729686 3.4 - Term 729634 - 729666 3.1 699 372 Tu 1 . - CDS 729737 - 730867 1523 ## COG1485 Predicted ATPase + Prom 730887 - 730946 2.3 700 373 Tu 1 . + CDS 731058 - 731456 573 ## COG3105 Uncharacterized protein conserved in bacteria + Prom 731523 - 731582 4.7 701 374 Op 1 6/0.153 + CDS 731630 - 732997 1786 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Prom 733000 - 733059 2.1 702 374 Op 2 . + CDS 733085 - 734143 1304 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 734145 - 734180 -0.4 - Term 734133 - 734165 5.0 703 375 Tu 1 1/0.707 - CDS 734169 - 734879 615 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase - Term 734890 - 734926 8.1 704 376 Op 1 9/0.100 - CDS 734939 - 736240 2253 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 705 376 Op 2 . - CDS 736256 - 736459 205 ## COG0511 Biotin carboxyl carrier protein - Prom 736559 - 736618 80.3 706 377 Op 1 4/0.380 - CDS 736920 - 738437 2296 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 707 377 Op 2 1/0.707 - CDS 738453 - 738704 259 ## COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit - Term 738722 - 738757 3.6 708 378 Op 1 11/0.040 - CDS 738846 - 739505 236 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 709 378 Op 2 1/0.707 - CDS 739463 - 740362 240 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 710 378 Op 3 1/0.707 - CDS 740395 - 741663 1778 ## COG0471 Di- and tricarboxylate transporters - Prom 741689 - 741748 4.4 - Term 741832 - 741864 3.0 711 379 Op 1 1/0.707 - CDS 741875 - 742540 662 ## COG1802 Transcriptional regulators 712 379 Op 2 1/0.707 - CDS 742527 - 743021 447 ## COG1802 Transcriptional regulators - Prom 743185 - 743244 3.4 - Term 743225 - 743277 6.3 713 380 Tu 1 . - CDS 743288 - 744226 1263 ## COG0039 Malate/lactate dehydrogenases + Prom 744554 - 744613 7.0 714 381 Tu 1 . + CDS 744641 - 745111 550 ## COG1438 Arginine repressor + Prom 745292 - 745351 5.7 715 382 Op 1 . + CDS 745485 - 745748 354 ## KP1_4962 hypothetical protein 716 382 Op 2 . + CDS 745847 - 746113 270 ## Kvar_0452 hypothetical protein + Term 746141 - 746171 3.3 - Term 746216 - 746254 -0.2 717 383 Tu 1 4/0.380 - CDS 746307 - 746582 403 ## COG2732 Barstar, RNAse (barnase) inhibitor - Term 746623 - 746653 3.0 718 384 Op 1 6/0.153 - CDS 746662 - 748629 1834 ## COG1289 Predicted membrane protein 719 384 Op 2 . - CDS 748635 - 749567 871 ## COG1566 Multidrug resistance efflux pump 720 384 Op 3 . - CDS 749575 - 749778 65 ## Kvar_0448 hypothetical protein - Prom 749834 - 749893 6.0 + Prom 749822 - 749881 4.8 721 385 Tu 1 . + CDS 749910 - 750839 997 ## COG0583 Transcriptional regulator - Term 750638 - 750690 1.9 722 386 Op 1 3/0.473 - CDS 750875 - 752320 1893 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 723 386 Op 2 5/0.247 - CDS 752409 - 756206 3785 ## COG3164 Predicted membrane protein 724 386 Op 3 8/0.107 - CDS 756244 - 757713 1648 ## COG1530 Ribonucleases G and E 725 386 Op 4 7/0.127 - CDS 757716 - 758297 475 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 726 386 Op 5 19/0.000 - CDS 758305 - 758793 576 ## COG2891 Cell shape-determining protein 727 386 Op 6 22/0.000 - CDS 758793 - 759785 1217 ## COG1792 Cell shape-determining protein - Term 759802 - 759845 4.1 728 386 Op 7 2/0.600 - CDS 759856 - 760878 1209 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 760939 - 760998 5.0 - Term 761135 - 761171 -0.9 729 387 Tu 1 . - CDS 761205 - 763145 1718 ## COG2200 FOG: EAL domain - Prom 763240 - 763299 3.5 730 388 Op 1 13/0.027 + CDS 763645 - 764646 1121 ## COG2041 Sulfite oxidase and related enzymes 731 388 Op 2 1/0.707 + CDS 764646 - 765245 527 ## COG2717 Predicted membrane protein + Term 765277 - 765326 1.4 + Prom 765316 - 765375 5.1 732 389 Op 1 9/0.100 + CDS 765478 - 765930 344 ## COG0757 3-dehydroquinate dehydratase II 733 389 Op 2 27/0.000 + CDS 765953 - 766420 471 ## COG0511 Biotin carboxyl carrier protein 734 389 Op 3 6/0.153 + CDS 766431 - 767780 1455 ## COG0439 Biotin carboxylase + Term 767794 - 767833 4.1 + Prom 767807 - 767866 4.7 735 390 Op 1 4/0.380 + CDS 767891 - 768133 433 ## COG3924 Predicted membrane protein 736 390 Op 2 3/0.473 + CDS 768123 - 769574 1613 ## COG4145 Na+/panthothenate symporter 737 390 Op 3 7/0.127 + CDS 769586 - 770467 1544 ## PROTEIN SUPPORTED gi|206577246|ref|YP_002236326.1| ribosomal protein L11 methyltransferase + Term 770468 - 770507 4.1 + Prom 770630 - 770689 3.3 738 391 Op 1 12/0.033 + CDS 770825 - 771790 1087 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 739 391 Op 2 . + CDS 771815 - 772111 387 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator + Term 772134 - 772185 4.2 740 392 Tu 1 . - CDS 772196 - 772849 451 ## COG1309 Transcriptional regulator - Prom 772897 - 772956 6.3 + Prom 773010 - 773069 7.0 741 393 Op 1 27/0.000 + CDS 773228 - 774367 1223 ## COG0845 Membrane-fusion protein 742 393 Op 2 . + CDS 774380 - 777490 3047 ## COG0841 Cation/multidrug efflux pump + Term 777505 - 777541 4.7 + Prom 777509 - 777568 5.9 743 394 Tu 1 . + CDS 777788 - 778009 254 ## Kvar_0425 hypothetical protein + Term 778076 - 778109 6.1 744 395 Tu 1 . + CDS 778114 - 778614 -521 ## gi|91074357|gb|ABE09238.1| hypothetical protein UTI89_C3805 - 5S_RRNA 778463 - 778582 100.0 # AP006725 [R:4755115..4755234] # 5S ribosomal RNA # Klebsiella pneumoniae NTUH-K2044 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. - TRNA 778619 - 778694 88.7 # Thr GGT 0 0 Predicted protein(s) >gi|289775900|gb|GG745510.1| GENE 1 289 - 2874 1889 861 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 861 1 811 815 732 46 0.0 MGGVMRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGVN AGKLRTDIEQALSRLPQVEGTGGDVQPSQDLVRILNLCDKLAQKKKDNFISSELFVLAAL ESRGTLTDLLKSAGATTANVTQAIEQMRGGESVNDQGAEDQRQALKKFTVDLTERAEQGK LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRR VLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAG NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKER YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD RRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIK AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEI AEVLARWTGIPVSRMMESERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNR PIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM TSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQ IQLQRLYKRLEERGYEVRMSDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSG ELVPGKAVELVVKDDRIVAVQ >gi|289775900|gb|GG745510.1| GENE 2 2992 - 3723 454 243 aa, chain - ## HITS:1 COG:STM2661 KEGG:ns NR:ns ## COG: STM2661 COG1496 # Protein_GI_number: 16765977 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 243 1 243 243 427 82.0 1e-120 MTKLIVPQWPMPRSVAACSSTRIGGVSLPPYDSLNLGAHCGDNLQHVEENRRRMFAAGGL PSYPVWLEQVHGTDVLTLDGGPYPSKRADASYSRTPGTVCAVMTADCLPVLFCNRDGTEV AAAHAGWRGLCEGVLEETVARFADKAENMMAWLGPAIGPQAFEVGPEVRDAFMAKDENAH RAFRPAGEKYFADIYQLARQRLANVGVEQIFGGDRCTLSEKDDFFSYRRDKTTGRMASFI WLI >gi|289775900|gb|GG745510.1| GENE 3 3720 - 4700 1067 326 aa, chain - ## HITS:1 COG:STM2662 KEGG:ns NR:ns ## COG: STM2662 COG0564 # Protein_GI_number: 16765978 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Salmonella typhimurium LT2 # 1 326 1 326 326 592 91.0 1e-169 MAQRVQLTATVTENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGNIGDKPKEKVL GGEHIAIDVEIEEEARFQPQDIPLNIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMT SGGTVEEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHM SHITHPLVGDQVYGGRPRPPKGASEEFITALRKFDRQALHATMLRLYHPITGIEMEWHAP IPQDMVELIEAMRADFEAHKDDIDWL >gi|289775900|gb|GG745510.1| GENE 4 4832 - 5569 922 245 aa, chain + ## HITS:1 COG:STM2663 KEGG:ns NR:ns ## COG: STM2663 COG4105 # Protein_GI_number: 16765979 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 436 93.0 1e-122 MTRMKYLVAAATLSLALVGCSGSKEEVPDNPPNEIYATAQQKLQDGNWKQAITQLEALDN RYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTNMALD DSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAYKRMVFLKDRLAKYELS VVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQADKVAKIIAA NSKNT >gi|289775900|gb|GG745510.1| GENE 5 5841 - 6176 521 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA [Enterobacter sp. 638] # 1 111 1 111 113 205 90 4e-51 MTMNITSKQMEITPAIRQHVADRLAKLDKWQTHLINPHIILSKEPQGFIADATINTPNGH LVASARHEDMYAAINELINKLERQLNKVQHKGEARRAATSVKEAGFVEEEE >gi|289775900|gb|GG745510.1| GENE 6 6431 - 7591 1461 386 aa, chain + ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 385 1 281 282 506 88.0 1e-143 MTEENPLLALRDKISALDEKLLALLAERRGLAVEVGKAKLASHRPVRDIDRERDLLERLM TIGKRHNLDAHYITRLFQLIIEDSVLTQQTLLQQHLNKINPHSARVAFLGPKGSYSHLAA RQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGGINDVYDLLQHTSLSI VGELTIPIDHCVLVSTSTDADKIQTVYSHPQPFQQCSQYLSRYPHWKIEYTESTSAAMEK VAQANSPAVAALGSEAGGALYSLQVQEHCQANQTQNITRFLVLARKAVNVSDQVPAKTTL LMATGQQAGALVEALLVLRNHNLIMTKLESRPIHGNPWEEMFYLDIQANLDSLPMRKALK ELAEITRSMKVLGCYPSENVVPVDPV >gi|289775900|gb|GG745510.1| GENE 7 7588 - 8460 1003 290 aa, chain - ## HITS:1 COG:STM2668 KEGG:ns NR:ns ## COG: STM2668 COG3386 # Protein_GI_number: 16765983 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Salmonella typhimurium LT2 # 1 290 1 290 302 478 76.0 1e-135 MAEPQPLFDYTGYLPECPTWSEAEQALYWADIMECEIHRYDTRSGEHQVLQFPEEVGCFS LREKGGFIVALRSGIWLTDAHGLLRRKVCDNPSNPELARFNDGGTDREGRFYAGTFWGPG DYNGALLMRVDNDLKPKVIQCDIHGANGLAFSADQRWMYTSDTPNAVIYRTPLDERGEPG RREVFRRFQPGEGIPDGAAIDVEGCYWSAMFDGWRIARFSPQGEELETYPMPVRCPTMVC FGGADMKTLYITTTRENMEDDELAKYPLSGAIFTLPVAVAGMKKLPFRER >gi|289775900|gb|GG745510.1| GENE 8 8523 - 9644 1550 373 aa, chain - ## HITS:1 COG:ECs3463_2 KEGG:ns NR:ns ## COG: ECs3463_2 COG0287 # Protein_GI_number: 15832717 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Escherichia coli O157:H7 # 100 373 1 274 274 515 93.0 1e-146 MVAELTALRDQIDEVDKALLSLLAKRLELVAEVGEVKSQYGLPIYVPEREAAMLASRREE AAALGVPPDLIEDVLRRVMRESYSSENDKGFKTLHPNLRPVVIVGGGGQMGRLFEKMLTL SGYQVRILEKDDWARAADIVADAGMVIVSVPIHTTVETIGRLPPLPADCILVDLASVKAE PLQAMLAAHQGPVLGLHPMFGPDSGSLAKQVVVYCDGRQPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVRLEQLLALSSPIYRLELAMVGRLFAQDP QLYADIIMSSENNLALIKRYYQRFGEAIGLLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE SRTLLRQANDNRQ >gi|289775900|gb|GG745510.1| GENE 9 9654 - 10724 1311 356 aa, chain - ## HITS:1 COG:aroF KEGG:ns NR:ns ## COG: aroF COG0722 # Protein_GI_number: 16130522 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli K12 # 1 355 1 355 356 659 90.0 0 MQKDALNNVHITDEHVLMTPEQLKAEFPLSVEQEAQIAHARETISDIIAGRDPRLLVVCG PCSIHDPEAAIEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDV EGGLKIARRLLVELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL SMPVGFKNGTDGSLATAINAMRAAAMPHRFVGINQAGQVCLLQTQGNPNGHVILRGGKAP NYGPEDVAKCEKEMAQAGLKPSLMVDCSHGNSNKDFRRQPAVAESVVAQIKDGNRSIIGL MIESNIHEGNQSSEQPRETMKYGVSVTDACISWETTDALLRELDKDLRGHLAARLV >gi|289775900|gb|GG745510.1| GENE 10 11067 - 11576 168 169 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1142 NR:ns ## KEGG: Kvar_1142 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 169 1 169 169 341 100.0 8e-93 MTVLHRLLLTVFFLIAVSPVFAAGPSEHVRAIVSGIVTYTRWPALTGAPKLCIFASSRFT HSLAHEDPDALPYQPVIVRNSEEALKTTCDGFYFGSESPTQQSELTRRYGPKPLLLIAEQ NTDCSIGSAFCLIINDDRVRFSVNLDVLTHSGVRVNPDVLMLARKKPHE >gi|289775900|gb|GG745510.1| GENE 11 11653 - 12792 1268 379 aa, chain + ## HITS:1 COG:ECs3467_2 KEGG:ns NR:ns ## COG: ECs3467_2 COG2199 # Protein_GI_number: 15832721 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 # 209 379 1 171 171 220 63.0 3e-57 MTLVWLLLSTASIFTLKQYAQKNLELTAATMGRSLEAALVFGDSAAAEETLASLGKQGQI SQAIVLNGQKQHFAAWRHEPLANKEQVSGLISQWLFPEPTVQPIWHQGKQIGELRLTALD ELISHFLGISILVLTGSILLASFIALLLTHSLHRGIVTALQSITEVVHDIRENRHFSRRV PEERIEEFHLFAQDFNSLLGEMEDWQRQLQAKNAQLLRSSLHDPLTGLANRAAFRNALAE LMKNEVDHQTSALLFLDGDNFKLINDNWGHAAGDKVLTEVASRLMAFAGKRHLAWRLGGD EFAVLLREVRSEAEVQALCQALSEQFLPPFNLHNGHSATLSLSVGYALAWEHATAESLQE LADQNMYRMKNQRIQQTLK >gi|289775900|gb|GG745510.1| GENE 12 12806 - 13288 498 160 aa, chain + ## HITS:1 COG:yfiB KEGG:ns NR:ns ## COG: yfiB COG2885 # Protein_GI_number: 16130526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli K12 # 1 160 1 160 160 244 73.0 4e-65 MLRKYFVPALMAAALLTGCQAPQGKFTPEQVAAMKSYGFTESNGDWSLGLSDSILFDKND YRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVADAWAEGA HVPRSHLVTRGLGKKYPIASNDTAAGRAENRRVTVVISTP >gi|289775900|gb|GG745510.1| GENE 13 13297 - 14664 1445 455 aa, chain - ## HITS:1 COG:Cgl2275 KEGG:ns NR:ns ## COG: Cgl2275 COG3182 # Protein_GI_number: 19553525 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Corynebacterium glutamicum # 13 437 33 457 475 241 37.0 3e-63 MTTCTSRAAWLNLLRRLHFYIGLFIGPFIFVAALTGTLYVATPQLENWLYHDALHGLADG TPQPLSAQIAVAEEATQGNLRLLAVRPAPAMGETTRIMFVDPSLGESESRAIFVDPISLR VKGDMTVYGTSGILPLRQWIDYAHRSLLLGDSGRLYSELAASWMWVAALGGIALWAMTRP KRRINNVLQNHRRLHVTLGWGLLLGMLLFSATGLTWSQWAGGNVDKMRAAFGWWTPQVNT LLHGEAPMAHDPHAGHHMDGMAMQHQSVLQPAQFDLVLAVARQAGLNASRLEIRPPVSKE RAWTVNEIDRRWPTQVDAVAIDGATMQVVDRTRFADFPLMAKLTRWGVDFHMGVLFGLVN QLLLVGFGCALCVTIGVGYRLWWIRRPPQAVWDPAHSLLQAWLSLAWPARGLVLGIALAL GLAMPLMGASLVLFIAVDYLRWRAATAMRMAKSSD >gi|289775900|gb|GG745510.1| GENE 14 14721 - 15179 273 152 aa, chain - ## HITS:1 COG:no KEGG:KP1_4183 NR:ns ## KEGG: KP1_4183 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 6 152 6 152 152 210 91.0 2e-53 MVSNSFQQTTPKRRAAWLALLAILLIVVAPLISISLQKDPMSAMPGMHHAMMMDSSSASM AQMPDHEMAIMHSTDGAMHTGHELPLDHAEACGYCVLLAHVPGLLFALALFVAMLLRRIR LPASRPVLKHWHYFPWLYPETRAPPRLSAFSL >gi|289775900|gb|GG745510.1| GENE 15 15298 - 15645 573 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152971456|ref|YP_001336565.1| 50S ribosomal protein L19 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 115 1 115 115 225 100 3e-57 MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVVDSIAVKRRGAVRKAKLYYLRERTGKSARIKERLN >gi|289775900|gb|GG745510.1| GENE 16 15685 - 16452 521 255 aa, chain - ## HITS:1 COG:ECs3470 KEGG:ns NR:ns ## COG: ECs3470 COG0336 # Protein_GI_number: 15832724 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 475 96.0 1e-134 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIESWSPRDFAHDRHRTVDDRPYGGGPGM LMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFADGLLDCPH YTRPEVLEEMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQAKLLAQF KSEHAQQQHKHDGQA >gi|289775900|gb|GG745510.1| GENE 17 16484 - 17032 194 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 11 177 2 160 179 79 30 3e-13 MSKQHTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWLIQKAGQWQVVEL EGWRHHNQDIIIKLKGVDDRDAANLLTNCEIIVDSSQLPELEEGDYYWKDLMGCQVVTTE GYSLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRTIEVDWDP GF >gi|289775900|gb|GG745510.1| GENE 18 17032 - 17061 48 9 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213976642|ref|ZP_03403901.1| 30S ribosomal protein S16 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] # 1 9 81 89 89 23 100 2e-33 KQLNLSRWS >gi|289775900|gb|GG745510.1| GENE 19 17051 - 17359 513 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238896055|ref|YP_002920791.1| 30S ribosomal protein S16 [Klebsiella pneumoniae NTUH-K2044] # 1 102 1 102 102 202 98 3e-50 MTPGSVPRWGPVVLFTQEDVMVTIRLARHGAKKRPFYQVVVTDSRNARNGRFIERVGFFN PIASGAEEETRLDLDRIAHWVGLGATVSDRVAALIKAANKAA >gi|289775900|gb|GG745510.1| GENE 20 17570 - 18934 2014 454 aa, chain - ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 454 1 453 453 783 96.0 0 MFDNLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFISRVKESAV GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLDLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK LKFYDVLLVDTAGRLHVDEAMMDEIKHVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRVASRILGMGDV LSLIEDIESKVDRAQAEKLASKLKKGDGFDLTDFLEQLRQMKNMGGMASLMGKLPGMGQI PDNVKAQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF DDMQRMMKKMKSKGGMMKMMRGMKGMMPPGFPGR >gi|289775900|gb|GG745510.1| GENE 21 19098 - 19889 1031 263 aa, chain + ## HITS:1 COG:STM2678 KEGG:ns NR:ns ## COG: STM2678 COG4137 # Protein_GI_number: 16765993 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 263 1 263 263 426 92.0 1e-119 MPVFALLALVAYSVSLALIIPGLLQKNSSWRRMAILSATIALICHAFALEARIFPGGESG QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFVPNEYITHLET TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSSEMPPLMSIERKMFHIT QVGVVLLTLTLCSGLFYMHNLFSSENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF SVAGAGLLTLAYFGSRVLQQFVS >gi|289775900|gb|GG745510.1| GENE 22 19909 - 21195 1852 428 aa, chain + ## HITS:1 COG:STM2679 KEGG:ns NR:ns ## COG: STM2679 COG4536 # Protein_GI_number: 16765994 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Salmonella typhimurium LT2 # 16 428 1 413 413 720 92.0 0 MEHISTTTLIITLIVMVIISAYFSGSETGMMTLNRYRLRHMAKQGNRPAKRVEKLLRKPD RLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALY PEKVAYPSSFLLAPLQVLMMPLVWLLNTITRMLMRMMGIRTDTVISSALSKDELRTIVNE SRSQISRRNQDMLLSVLDLEKVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVL YRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKK KVGLVVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPLNDGTVIIDGSANVREI NKAFNWHLPEDEARTVNGIILEALEEIPIPGTRVRIEQYDIDILDVQDNMIKQVKVMPVK SLRESVAE >gi|289775900|gb|GG745510.1| GENE 23 21317 - 21907 888 196 aa, chain - ## HITS:1 COG:ECs3476 KEGG:ns NR:ns ## COG: ECs3476 COG0576 # Protein_GI_number: 15832730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Escherichia coli O157:H7 # 1 196 1 196 197 276 87.0 2e-74 MSSKEQKTPEGQAPEEIITEQHDDVEAVEPEVSAEQVDPRDEKIANLEAQLAEAQKRERE VMLRAKADEDNLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDLAPMV EGIELTLKSMLDVVRKFGVEVIADTNVPLDPNVHQAIAMVESEDVAAGNVLAVMQKGYTL NGRTIRAAMVTVAKAK >gi|289775900|gb|GG745510.1| GENE 24 22032 - 22910 1034 292 aa, chain + ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 1 292 1 292 292 585 94.0 1e-167 MKNHFKCIGIVGHPRHPTALTTHEMLWRWLCSKGYEVLVEQQIAHELQLSNVKTGTLAEI GQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLADVLEGH YIAEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEVFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINGDSTIRLRFSHRCSDL EISCDSQIALPIQDGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF >gi|289775900|gb|GG745510.1| GENE 25 22997 - 24658 2141 553 aa, chain + ## HITS:1 COG:ECs3478 KEGG:ns NR:ns ## COG: ECs3478 COG0497 # Protein_GI_number: 15832732 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 553 1 553 553 856 84.0 0 MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGAT RADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLREL GQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELALHQQQS QERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFE LEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALET ARQLHALRQASADELTQLITESMHSLSMPHGIFAIEVAFDERHLTADGADHIEFRVTTNP GQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVT RNTLANAKELLAA >gi|289775900|gb|GG745510.1| GENE 26 24806 - 25147 360 113 aa, chain + ## HITS:1 COG:STM2685 KEGG:ns NR:ns ## COG: STM2685 COG2913 # Protein_GI_number: 16766000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Salmonella typhimurium LT2 # 1 111 1 111 112 200 93.0 4e-52 MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALG TPMMSDPFGTNTWFYVFRQEPGHEKVTQQTLTLTFNSGGVLTNIDNKPALTSQ >gi|289775900|gb|GG745510.1| GENE 27 25217 - 25507 322 96 aa, chain - ## HITS:1 COG:yfjF KEGG:ns NR:ns ## COG: yfjF COG2914 # Protein_GI_number: 16130537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 7 102 102 140 84.0 5e-34 MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPV KLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK >gi|289775900|gb|GG745510.1| GENE 28 25497 - 25934 490 145 aa, chain - ## HITS:1 COG:yfjG KEGG:ns NR:ns ## COG: yfjG COG2867 # Protein_GI_number: 16130538 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Escherichia coli K12 # 1 144 14 157 158 259 90.0 9e-70 MPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISK TFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFG RVFKELAANMVQAFTSRAKEVYSAS >gi|289775900|gb|GG745510.1| GENE 29 26084 - 26566 590 160 aa, chain + ## HITS:1 COG:STM2688 KEGG:ns NR:ns ## COG: STM2688 COG0691 # Protein_GI_number: 16766003 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 160 1 160 160 295 94.0 2e-80 MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKD GEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKN AWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR >gi|289775900|gb|GG745510.1| GENE 30 27472 - 28602 299 376 aa, chain + ## HITS:1 COG:lin0833 KEGG:ns NR:ns ## COG: lin0833 COG1479 # Protein_GI_number: 16799907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 34 293 121 396 489 150 35.0 4e-36 MHNADVENDTIELEDQEELELTSHPHQMGTDTEVRIAKEQSSVFELLRRESRGQLVLAPD FQRKDVWDRKRQSELIESILMGIPIPLIYLFEDENGTRQIIDGKQRISALKRFINNDFAL TDLSMLPKLRGMKFSEIPPLLQAKLEDCQLHSYVIQPPTPEYVKFNIFERVNRNGMNLNK QEMRHALYQGKATRLIQKLAESTIFKKSTGSGVKADRMRDRYLVLRFVAFYLLIGGNLPD IEFRSDIDAFLASVMKFINTKADDEVINNAEKACLRGMRNVFQAVGPEAFRFTSKTGAKR RPINMGLFEVLIMVFSQVKLDLLPENIDLHDFIEQYKKNFDDIGIFSGAIDTTEYVNMRF DFAREMIKRIKNAYAN >gi|289775900|gb|GG745510.1| GENE 31 29288 - 29635 73 115 aa, chain + ## HITS:1 COG:lin0834 KEGG:ns NR:ns ## COG: lin0834 COG4938 # Protein_GI_number: 16799908 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 115 254 362 369 72 38.0 1e-13 MAKKGDLIFLENPEIQLHPKAQAHLAIFLTFIASKGIQIIVETHCEHLINKLAYLVYEDD ISPEKVILHYKPEVDENFVSIKINENGKFTDLNGDVTGFPLGFFDATLDDLMQMR >gi|289775900|gb|GG745510.1| GENE 32 29886 - 30389 -328 167 aa, chain + ## HITS:1 COG:no KEGG:Swoo_0708 NR:ns ## KEGG: Swoo_0708 # Name: not_defined # Def: hypothetical protein # Organism: S.woodyi # Pathway: not_defined # 3 165 98 252 255 72 32.0 8e-12 MKIILTEDENLPLPYVHYKKGMVNNQVTVTLSPSDNRTHLKTYLKMLCSNARKITICDNY FAQNWDNTCSLFHSILPRKTLTIEFSEIAAGIVAVTNCSKINNDFAHSIHPGWTVQITTN QKYTNCHDRYLLIESPEGKIEIMLSSGFDHIWKTHPKELTCIFRDAS >gi|289775900|gb|GG745510.1| GENE 33 31037 - 31837 635 266 aa, chain - ## HITS:1 COG:no KEGG:KPK_1167 NR:ns ## KEGG: KPK_1167 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 266 1 266 266 521 97.0 1e-146 MLNTLPDLHRSFAEQLKLKLQSDSRIHSLLAGGSFIHGGFDQYSDLDFVVVVDPLYYDEI MAQRMAFAGTLGHLLHAFTGEHVGEPRLLICLFGPQLLHVDMKFITLDMLTQRVEEPAVL FTRDSDALERQLAKFSAHWPNMTPEWFESRAWIWLHYAVVKLGRGELFEAMGMLSFFREQ VLGPMLFRRANLPQRGVRRIEALGIDPDGLLTSTLATHDRHSVGIAIRRAADAYVTLRAD ALPDNIADDAARRAVLAMLDAYSDKG >gi|289775900|gb|GG745510.1| GENE 34 31962 - 32846 872 294 aa, chain - ## HITS:1 COG:RSp1110 KEGG:ns NR:ns ## COG: RSp1110 COG0583 # Protein_GI_number: 17549331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 291 1 291 315 268 47.0 7e-72 MDRIQAMQMFMRVAEAGSFVRAAETLSLPASTVTSTIKNLEKYLKVRLLNRTTRRVSLTP EGLQYLAQCREILALIEHSESSLSESVARPQGRLRVDMPAGIAHFIVMPHLPDFYRRYPD IYLMIGVSDRQVDLIQEGVDCVIRMGELNNSSLVARPLGRFRWVTCASPYYLREYGVPSS PEALSKHRAVHYFSGQARRADEFRFVRHGETFSVPVSGNAAVNETGLYIKMCLAGFGLAQ LAENIVADHLQEGRLVEVLTDWQPPPVPVTLLYPHQRFLSPAVRAFAEWMSEVV >gi|289775900|gb|GG745510.1| GENE 35 33058 - 33630 697 190 aa, chain + ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 5 179 22 200 205 100 34.0 2e-21 MSVQPVELSKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGPQAFTRQL VEKSGYFVVQIPVVSQMATVLYAGGRSYADAPDKNDSIPFIYQPGFDIPLVAGCAGWLVC KVMPYPDIQQQHNLFLGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKG SKFDHGPGQD >gi|289775900|gb|GG745510.1| GENE 36 33650 - 34003 345 117 aa, chain - ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 111 1 111 289 123 50.0 7e-29 MNTGAIIQDLIDWIDNHLDSRLDIDTVARRSGYSKWHLQRIFKEHTGQPLGEYIRAQKLQ KSVERLAHSNEPILNVAIALGFDSQQSFNRSFKRQYGQAPGVWRRSISRSAGQASRQ >gi|289775900|gb|GG745510.1| GENE 37 34337 - 35512 1398 391 aa, chain + ## HITS:1 COG:PA2493 KEGG:ns NR:ns ## COG: PA2493 COG0845 # Protein_GI_number: 15597689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 17 390 14 382 414 294 46.0 2e-79 MSLQKTWGNIHLTALGAMMLSFLLVGCDDSVAQNAAPPAPTVSAAKVLVKSISQWDSFNG RIEAVESVQLRPRVSGYIDKVNYTDGQEVKKGQVLFTIDDRTYRAALEQAQATLARAKTQ ASLAQSEANRTDKLVHTNLVSREEWEQRRSAAVQAQADIRAAQAAVDAAQLNLDFTKVTA PIDGRASRALITSGNLVTAGDTASVLTTLVSQKTVYVYFDVDESTYLHYQNLARRGQGAS SDNQALPVEIGLVGEEGYPHQGKVDFLDNQLTPSTGTIRMRALLDNSQRLFTPGLFARVR LPGSAEFKATLIDDKAVLTDQDRKYVYIVDKDGKAQRRDITPGRLADGLRIVQKGLNPGD SVIVDGLQKVFMPGMPVNAKTVAMTTSAALN >gi|289775900|gb|GG745510.1| GENE 38 35536 - 38688 4401 1050 aa, chain + ## HITS:1 COG:PA2494 KEGG:ns NR:ns ## COG: PA2494 COG0841 # Protein_GI_number: 15597690 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 1 1042 1 1047 1062 1155 61.0 0 MDFSRFFIDRPIFAAVLSILIFITGLIAIPLLPVSEYPDVVPPSVQVRAEYPGANPKVIA ETVATPLEEAINGVENMMYMKSVAGSDGVLVTTVTFRPGTDPDQAQVQVQNRVAQAEARL PEDVRRLGITTQKQSPTLTLVVHLFSPNGKYDSLYMRNYATLKVKDELARLPGVGQIQIF GSGEYAMRVWLDPNKVAARGLTASDVVTAMQEQNVQVSAGQLGAEPLPQESDFLISINAQ GRLHTEEEFGNIILKTAQDGSLVRLRDVARIEMGSGSYALRSQLNNKDAVGIGIFQSPGA NAIDLSNAVRAKMAELATRFPEDMKWAAPYDPTVFVRDSIRAVVQTLLEAVVLVVLVVIL FLQTWRASIIPLIAVPVSVVGTFSILYLLGFSLNTLSLFGLVLAIGIVVDDAIVVVENVE RNIEEGLAPLAAAHQAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVTIAIST VISAINSLTLSPALAALLLKPHGAKKDLPTRLIDRLFGWIFRPFNRFFLRSSNGYQGLVS KTLGRRGAVFLVYLLLLCAAGVMFKVVPGGFIPTQDKLYLIGGVKMPEGSSLARTDAVIR KMSEIGMNTEGVDYAVAFPGLNALQFTNTPNTGTVFFGLKPFDQRKHTAAEINAEINAKI AQIQQGFGFSILPPPILGLGQGSGYSLYIQDRGGLGYGALQSAVNAMSGAIMQTPGMHFP ISTYQANVPQLDVQVDRDKAKAQGVSLTDLFGTLQTYLGSSYVNDFNQFGRTWRVMAQAD GPFRESVEDIANLRTRNNQGEMVPIGSMVNISTTYGPDPVIRYNGYPAADLIGDADPRVL SSSQAMTHLEELSKQILPNGMNIEWTDLSFQQATQGNTALIVFPVAVLLAFLVLAALYES WTLPLAVILIVPMTMLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEI QGKGIMEAALEACRLRLRPIVMTSIAFIAGTIPLILGHGAGAEVRGVTGITVFSGMLGVT LFGLFLTPVFYVTLRKLVTRRKPVQEDLPA >gi|289775900|gb|GG745510.1| GENE 39 38756 - 39235 591 159 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1117 NR:ns ## KEGG: Kvar_1117 # Name: not_defined # Def: Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family # Organism: K.variicola # Pathway: not_defined # 1 159 1 159 159 315 100.0 5e-85 MLDYRFPTALQMVLSVAMAEQMGERSTSAILAYGLEANPSFIRKLMVPLTRDGIIVSTLG RNGSIHLGRPADKITLRDIYLSVIEDKKLWASRPEVPARCVVSANACWYFKSIADEAEQA SLNVLARHTVASALEAVKNGDSSGCDPVPEMIARFKKAH >gi|289775900|gb|GG745510.1| GENE 40 39424 - 42312 2002 962 aa, chain - ## HITS:1 COG:XF0156 KEGG:ns NR:ns ## COG: XF0156 COG4870 # Protein_GI_number: 15836761 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cysteine protease # Organism: Xylella fastidiosa 9a5c # 311 560 18 265 271 74 28.0 1e-12 MVKLLLQGSSGPEVVELRKRLAKTLGADAKMFALPSNSDTFDATLASAVRHWQSNIGIIA DGVVGPYCQSLLALIKLPVFALRADEVQHLFPATKPSNVLRYLPYVAAALTSEGLTTIPL ILAALGTIRAETEGFVPISEYPSQFNTLPGLPAFSAYDVGTDKGKNLGNINPGDGARFRG RGFVQLTGRSNYQKYASRIGVDIIGSPDLANAPEVAAVLLAMFLGDRREALTAALTATPP DYRKARRLVNGGAHGLDSFKKVFTLAAVLPAVMQQTSQIQGAGAGRGARQQAGAAAIAAP AEGPVLNASKDPLDLRDRTYTPPPVSLPDRFPVDKDIATLLTVYTQAQLILDQGREGACT GFGLACVVNYLRWRKAGFPKKLDSVSPRMLYNFARRYDEYAGEDYDGSSCRGALKGWFHH GVCLESDWPYREQENIPPQYGYAERAVNTTLGVYYRIDIKNITDMQAAIHDVGAIYVSAF THEGWQTVPTAKKAPTNHDSLAVIAFNGKPIKTGGHAFALVGFNRDGFIVQNSWGTEWGC GGFAVLSYADWLTNAMDAWVAALGVPGVVPGQLATGSPALATPAAAGNHPQWWDETTAYQ HSIVIGNDGRVDRYLTQDEMTRTLMYQGCVLPDRWFRLQHAETKRLVIYAHGGLNNEAGS IARARAMGRYFTGNDCYPLFLVWKTGILESIGDIFSDHFRREPSRAGGVREALTEASDLL IEETIGRPAAKPLWSEMKENAEFSCVSGRAGDLLVTALQKLVETWGKALEIHIIGHSAGS IILGHFVDLLSSRGLGDALKSAHLYAPACTVQFANRHYAPHELLMKRMYLHILSDRIERA DNVAAIYRKSLLYFVSNALEGDRRTPLLGMDKIRDKNYSGWDGSSSTGEALRNWRHAAAE AGLEKRDRTNIIDTDKVNSGPGVMIDASHGSFDNNIDVISLTLQRIVENSQLNVPVDDLR GF >gi|289775900|gb|GG745510.1| GENE 41 42961 - 43872 1297 303 aa, chain - ## HITS:1 COG:PA1422 KEGG:ns NR:ns ## COG: PA1422 COG0583 # Protein_GI_number: 15596619 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 292 7 291 297 309 52.0 4e-84 MHHDASLNIRQLQVFEAVARLESYSRAQQELGISVSAISNAMSQLEGQLGFTLCQRGRGG FSLTEKGQQFLQQAIRVLSELNELERQSALLKGEHSGTLCISTLDSIETETALSLPVVLR SFSDKFPHVHIKLIIRTPAEQLNGVLNNHIDLAIGSYNSQVHNIISEPLYREQHWLYCSD LHPMFFSRQLDKEQISQCPLVTRSYWNTSDLRRRGFSKGSATVETVDAQLLLILSGKYIG YLPEHYAWPWIKENRLRVLLPNEFGFQSPFSAICKRGRSNEPYLKAFRDLLKKNTVARPK WNY >gi|289775900|gb|GG745510.1| GENE 42 44027 - 44938 1350 303 aa, chain + ## HITS:1 COG:PA1421 KEGG:ns NR:ns ## COG: PA1421 COG0010 # Protein_GI_number: 15596618 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Pseudomonas aeruginosa # 1 300 14 316 319 481 76.0 1e-136 MPRFAGRATMMRLPFIEDLQGLDAAFVGIPLDIGTSQRSGTRYGPRYIRAESVMIRPYNM ATGAAPFDSLSVADIGDVPINTYSLLKSVQIIEDYYTGLNSYPLIPLTLGGDHTITLPIL RALTKKHGPVGLIHVDAHTDTNDEMFGEKIAHGTTFRRAVEEGLLDLKRVVQIGQRAQGY AAGDFQWGVDQGFRLVQAEQCWHTSLAPLMAEVRQQMGDGPVYLSFDIDSLDPIWAPGTG TPEVGGLTSIQALEIVRGCRGLNLIGADLVEVSPPYDVSGNTSQLAANLLYEMLCVLPGV KYA >gi|289775900|gb|GG745510.1| GENE 43 44949 - 45812 1193 287 aa, chain + ## HITS:1 COG:no KEGG:KPK_1157 NR:ns ## KEGG: KPK_1157 # Name: not_defined # Def: AP endonuclease, family 2 # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 287 1 287 287 562 99.0 1e-159 MELKCFRTLWGVTTPWSQTLDELQRVGCCGIEARVPLTVAERRELADRLQASGLEYIAIL FSGGGVLPAQHETPEQHLARLQTRFAEASSLNPRFVNLLAGNDRWPLAQQVDFLGKAHEL AAGFGLTCSFETHRATSLYSPWLTLEIIQQLPQLRFTADISHWVVVSERLLDDPCDDFSA FIDRVQHVQARVGYDQGPQVPHPAAPEYQPALAFAERFWQQVWHSQRQRGYPQTTLTPEF GADGYLHHLPFTNVPVADLWSLNAWMAARQQAHFQQFLTLTEQEPQP >gi|289775900|gb|GG745510.1| GENE 44 45809 - 46876 1266 355 aa, chain + ## HITS:1 COG:PA0147 KEGG:ns NR:ns ## COG: PA0147 COG3491 # Protein_GI_number: 15595345 # Func_class: R General function prediction only # Function: Isopenicillin N synthase and related dioxygenases # Organism: Pseudomonas aeruginosa # 11 323 4 316 320 194 40.0 2e-49 MTAVKHAFTELPTIDIRDLAGDDLARRQAVADAIGRAAREVGFFYITGHGIDPALIAGVR EAAKQIFALPMEEKMNYYIGHSKSHKGYVPEGEEIYGSGKPDHKEAFDIGFQAADDHPLV LAGTPLIGANEWPDLPDFRARVLAYYDAVFALGHRLFDAFALALGLPEGYFKPMVTCPPA KLRLIHYPFDASVEDVPGIGAHTDYECFTLLLADQPGLEVLNEESVWIDAPPVKNAAGEE AFVINIGDMLEVLSAGTFVATAHRVRKVPQERYSFPLFFACDYHTLIRPLPTFLAAGEAG EYQELSIGEHMWSQALQTYRYLREKVNRGELQLPERARGTNTFGHLKKQAQQKNP >gi|289775900|gb|GG745510.1| GENE 45 46896 - 47699 1284 267 aa, chain + ## HITS:1 COG:DR2610 KEGG:ns NR:ns ## COG: DR2610 COG0834 # Protein_GI_number: 15807591 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Deinococcus radiodurans # 7 266 2 250 253 105 33.0 7e-23 MTSTLKKISRRVALTLAVSACFSPVTQAAELLTEGVFKVGMEVTYPPFESYDSNNNIVGL DPDFAALIAQHLQAKPQLIDTKFTSLILGIGKKYDAVISGMYVTPERQKQADAIPYALSG ASIIALKGGAVQPKTEDELCGVKVGLQAGTTWVTSLKKHSDEWCLKNGKPAITIQEFPTA PEASQALLSKNIGAQLEIAPAAQIIVDKSRGRLGISSTRLVYPLPLGIYVAKGNTELAEA IKATLAALKANGQYAALIKKYNLESID >gi|289775900|gb|GG745510.1| GENE 46 47730 - 49250 177 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 275 471 16 203 205 72 28 3e-11 MAFDWGYFFSLFSIGAFWQACVTVIVVSTLSWGIGLVVGFLLACAKLSAPRWVKIPVELY IWFFRSVPLMVLLVFVYNLPQLFPVTQPLLGVPFIAGLVSMTVTEAAYMAEIHRGGLLSV AKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILSVVSLPELLLT GQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKRPQTLSEAECQALRQ SLPALTEEIKTPAVNGAPPALDLRGIRKSWGQHEVLKGIDLQVENGEVISIIGPSGSGKT TLIRTINALESLDGGEIILYGEDYLKGGAIVDKRQMRAGVRRIGMVFQSFNLFPHRTVLD NVMLAPRYHQLLDQPVAREQALALLDRVGLLAHAHKYPWQLSGGQQQRVAIARALALKPD IMLFDEPTSALDPELVGEVLKVIQSLAREGMTMLIVTHEMDFALSISDRVVLMENGVVQA DIAPQVIRSPLEAPSLQRIREFMGVR >gi|289775900|gb|GG745510.1| GENE 47 49251 - 49979 1040 242 aa, chain + ## HITS:1 COG:PA3430 KEGG:ns NR:ns ## COG: PA3430 COG0235 # Protein_GI_number: 15598626 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pseudomonas aeruginosa # 2 241 17 258 259 193 44.0 2e-49 MATEQHLRQQLAAAYRLAALFGWEDTLYTHFSVRLPGDGEPRFLINPFGMMFDEVTASNL IVVDMQGKVVEGDAPANSAGFTIHSAVHMAREDAHCVIHTHTLPGMAVAACEDGLLQLNQ ISTEFYQRVGYHPYEGVAFDLDERARIQRSLGNNIAMILQSHGLLSVGRTVADAFYIMYY LNRACEIQMATAQLAALSPIHTIAPHLSQHACEQLMGVEHERQQVWQAWLRRLDRLDTSY KD >gi|289775900|gb|GG745510.1| GENE 48 49985 - 50917 990 310 aa, chain + ## HITS:1 COG:AGpA311 KEGG:ns NR:ns ## COG: AGpA311 COG0111 # Protein_GI_number: 16119446 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 310 32 308 308 209 38.0 4e-54 MSDITIVVDCNDADFARDICAALQQFPDVTALLPHHQAARDAQYASCWFPDPQLLSRSPG LKLIQAASAGVDHLPPALFASEIPLCRVIDEDFRHGMFEYALWSVLWFQRHFDRALAHQR TQTWKLYPQRAAADFHIGIMGLGEIGGYIADQLARLGYRVSGWSRSEKQLAGVTCYRGEE ALDHFLGSLDGLINLLPLTAQTRGILAAPLFNRLPAGAVLINCGRGEHMVNDDVLAALES GQLAGAVLDVFPQEPLPADDPLWRHPQVVITPHMASAAPAEVIARQLLENIQRQRRGLPL KNLVNKHAGY >gi|289775900|gb|GG745510.1| GENE 49 50978 - 51772 1093 264 aa, chain + ## HITS:1 COG:PA1344 KEGG:ns NR:ns ## COG: PA1344 COG1028 # Protein_GI_number: 15596541 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 263 1 263 264 290 60.0 2e-78 MKIDLSGKVALVTASTAGIGFAIAKGLAESGAEIIINGRSEQSVNAAIARLQNEVSGAKA RPAIADLSDADGAAQLLRAVTGVDILVNNAGIYGPQDFYATDDATWDNYWQTNVMSGVRL SRGLLPAMVSKGWGRVVFISSESARNIPADMIHYGVTKTAQLSLARGLAKYVAGSGVTVN SVLPGPTISDGFAEMLKDDVAKTGKSLEELAKAFVMTHRPSSVIQRAASVEEVANMVVYV CSPQASATSGAALRVDGGVVDDIL >gi|289775900|gb|GG745510.1| GENE 50 51930 - 52550 1104 206 aa, chain + ## HITS:1 COG:no KEGG:KPK_1150 NR:ns ## KEGG: KPK_1150 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 23 206 23 206 206 341 99.0 1e-92 MSLLRSLLFFLGAAVAAALAVLCLWVDIRVFGNDIPEVSLTEVVQESVLAVIVLVHFLLA RKYTHLRYSNILIGGFFLAMLIRELDGLFDLLSHGSWVWFALLATVGSLLAPLRHLRQTL SQLAEYTRTPYYGMMISGLLAILVFSRLFGMHGLWYAVLDENYARVVKNTVEEGSESFGY MLCLTATLGYACYFRGLARQTLSPQR >gi|289775900|gb|GG745510.1| GENE 51 52605 - 53441 974 278 aa, chain - ## HITS:1 COG:YPO3343 KEGG:ns NR:ns ## COG: YPO3343 COG0834 # Protein_GI_number: 16123493 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 27 276 5 254 256 310 62.0 1e-84 MLRMVLTDKRPITPARKIDNDKDGEMKLTVGLALTLAIMTCGAQARDMQTIEHSGELKVG VPGDYAPLAFRNAAGELQGYDVDMARDLGRTLGLKVSFVYTSWPALAADLRADKFDIAMG GVTQTPARAKDFALSHPVVANGKIALANCQAAPRLGSLAKIDRPEVKVVVNPGGTNQSFV DEHIKQAQIIRVQNNVDNLEALRQKTADMMVTDLIEGDYYQSKEPGVFCVANETPFAGTA SDKVYMMNKDNPALLEKVNQWLDSQDKEVLKRKWKIRG >gi|289775900|gb|GG745510.1| GENE 52 53908 - 54459 525 183 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1085 NR:ns ## KEGG: Kvar_1085 # Name: not_defined # Def: fimbrial protein # Organism: K.variicola # Pathway: not_defined # 1 183 1 183 183 349 98.0 3e-95 MKIITLCLATVFAGLAAVPALAAEGKLNFIGKVVNASCKLEGVSDSGVIDVSMGAIPLSR LKKSQSGTGPAVGIDIRVKDCEKGTYYIVVDGPSPAGTPENRVLALDGSGKPASKVGILL TDRTGTPLSLDERLDPQHDPRIEIPVDGGSGTFRLNAFYYTWDKTHADPGDGNATARFTI MQE >gi|289775900|gb|GG745510.1| GENE 53 54496 - 55185 642 229 aa, chain + ## HITS:1 COG:YPO2944 KEGG:ns NR:ns ## COG: YPO2944 COG3121 # Protein_GI_number: 16123127 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 1 216 7 241 259 114 29.0 2e-25 MKTQLAVLLCAVTFQACAGITINATRVVYSGKEKVASLNIHNRSSTPYKVQIWLDAGLNT SRVGLPIVATPPQVYLSPQQSAQLRFIYFGGGLPGDRESVYWVNIQETPPAAVGTHTLQF VVRTRLKLFYRPPAITTTLAREVQKLQWQQSGNHLRFTNSGPLHITLVNGTLIDNKGHLS PMRNVMLRPYSSHTVMTTDSTRLYQLNYIDDYGAVVPIPLQNAHAPASG >gi|289775900|gb|GG745510.1| GENE 54 55182 - 56105 851 307 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1083 NR:ns ## KEGG: Kvar_1083 # Name: not_defined # Def: fimbrial protein # Organism: K.variicola # Pathway: not_defined # 1 307 58 364 364 527 100.0 1e-148 MADNGSGIPFSCDLQLPTASAKRIVYKQLKTGGSPVVINGQHVYPSAIDGIGYSLSFQCA GGPMRAIDGSHSAGGESVVVCDSAMLPALMTQQQTTVRIAVTFYKTGTVQLADGTHTNSP SLPQVGEMTIEQQASGSASYVASAPVSIDMAALNVDIGSSGSCQVATSTIQVTLGTVNRA EFHGKGSTGGQAKRFSIPVFCPSPTDVRIGFFGVSVESDTLALSKASNSASGVGVKLTYG NNPGAAVSDGTSVKINEASNLPILKRVTGTNAGTAEAINFNAQYVQTDATVGAGTANSMV TFALEYN >gi|289775900|gb|GG745510.1| GENE 55 56284 - 58797 3034 837 aa, chain - ## HITS:1 COG:STM3638 KEGG:ns NR:ns ## COG: STM3638 COG3188 # Protein_GI_number: 16766924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 33 835 35 842 842 595 43.0 1e-169 MPVTAGRALALATVPTMMFCLSPLNRALADDYFDPAALEFADPQQQTSDLHYFAKPGGQQ PGTYSVTVVVNDQELGQADITFVDDGGKLQPVLTPGQLADYGVNVSAFPAFQTLHEGETF TRIEKFIPDASSRFTFANQRLTLSIPQAAMNVQSRGYVDPSRWDDGVPAAFVDYYFSGAQ IKNADDGESSRSNYLNLRSGVNLGAWRLRNVSSMQYDQQRRHWDTQSTWLQRDVRSLKSL LRIGDTYTTGDVFDSIPFRGVQLMSDDEMLPDSQRGFAPTIRGVAHSNAKVTVSQHGYVI YETFVSPGAFAISDLYPTSQSGDLEVKVTESNGSVRTFTQPYSAVPFMLREGRGKFSLSA GRYHSGADTVRSPEFLQGTLFYGLSAGFTLYGGTQLAQDYQSWALGLGRGFGEFGSLGGD VTQAVTRTPSGKRYAGHSLRAQYQKDFVSSGTSFSLASYRYSSSGYYDFAEASALESAQG QVDNRRRREELSVTQSLGGLGSLAISAWSQDYWHRQSRDETVHLGFYSAWKGISWGVGYY YTRASNQEKNDRSWSFNINIPLGGPLSDSAVSYNTTSDSNGYTSQQVSLYGAVPTRPNLF YSVQQGYGNQGRGSNSSVALDYHGGFGNAQLGYRHDAASNQLTWGGAGSVVAHPHGVTFG QTVGESFAIVRAPGAAGVAVQNGNNVHTDWRGYAVVPSLTAYRKNVITLDTESMADDTDV DQEGQTVIPGGGAVVMANYRTHIGNRVLFTLRNAQEPLPFGASARLVTAEESGNAPGGMV ADGGQVYLSGVPQEGTLAVSWVVNNQSQSCTLHFQLPDNPQQSLNTVKTVSGLCQTR >gi|289775900|gb|GG745510.1| GENE 56 58876 - 59535 761 219 aa, chain - ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 14 212 17 218 227 176 45.0 4e-44 MKKIIAVAAFLLCSTAAQAGIVMGGTRVIYQEGKREAAISVTNADTHTPYLVQSWVENYA ENDKSKVPFIVTPPLFRLDPEQNNVLRINFIGASLPGDRESVFWLNVKSISPTPQGEVNK LQVNIKSKFKIFYRPNGLAGDPAKAWQQLKFTQSGGHLTVANPTPYFVSFYSVAVGGQSI DEPGMVAPFGQKTWPVSGHGAVKWRAINDYGGVSDFAQQ >gi|289775900|gb|GG745510.1| GENE 57 59733 - 60326 546 197 aa, chain - ## HITS:1 COG:STM0026 KEGG:ns NR:ns ## COG: STM0026 COG3539 # Protein_GI_number: 16763416 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 38 196 14 171 172 79 36.0 4e-15 MKTQLRIMAILMGALVSGAAISGNTQPARSTMTVNPGASAGTQGTGGQVIFNGSITDSSC NVDSGSTGQTVDLGKWASSYFTGTGSETTKTPFHIKVKDCPASVAKVAVLFDGARDQSDT TLLATNGGATGVAIKLYEDDQNTAVSLGKVSKDHPVVAGATAGTGSADLEFYADYVSTGA VAAGDANGTANFNMIYN >gi|289775900|gb|GG745510.1| GENE 58 61026 - 62546 1901 506 aa, chain - ## HITS:1 COG:RSc3128 KEGG:ns NR:ns ## COG: RSc3128 COG1012 # Protein_GI_number: 17547847 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Ralstonia solanacearum # 1 506 1 506 506 811 77.0 0 MRYAHPGQPGALVSFKSAYGNFIDGKFVEPLSGEFFMNTSPVDGSNIAQFPRSDAKDIEF ALDAAHRAAPAWGKTSVQQRSRLLLQVADRIEQHLEYLAVAESWDNGKPIRETLNADLPL AVDHFRYFAGCLRAQEGSTAEIDETTVAYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALA AGNCVVLKPAEQTPLSITLLLELIGDLFPAGVLNVVQGFGKEAGEALATSKRIAKLAFTG STPVGRHILACAAENIIPCTVELGGKSPNIYFADVMEGEEEFIEKAVEGLVLGFFNQGEV CTCPSRALIHESIYEPFMARVMEKVAQIRRGDPLDTDTMIGAQASRQQFDKILSYIQIAR EEGGQILTGGERAAIAPALDNGFYIQPTLIKGRNDMRSFQEEIFGPVIGVTTFKDEAEAL TIANETQFGLGAGVWTRDTNLAYRMGRGIKAGRVWTNCYHVYPAHAAFGGYKQSGVGRET HKMALDAYQQTKNLLVSYGTAPLGLF >gi|289775900|gb|GG745510.1| GENE 59 62810 - 64597 1878 595 aa, chain + ## HITS:1 COG:RSc3129 KEGG:ns NR:ns ## COG: RSc3129 COG3284 # Protein_GI_number: 17547848 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Ralstonia solanacearum # 14 594 32 634 637 295 35.0 2e-79 MPGNPYLLAPEVNANPLLSDSWSRCQRYGLDPATEDFPRLRAGELADRLASHRSLQQLAQ PVVDALSRQVADLQSVVVLSDPSGLVLHTVGDTQAMQKAQRVALAPGNLWSESGRGTNAI GTALVIDDGCEIDGRQHFLTRNQNLYCAAMPLQRPDGSIAGVLDISGPADFPHQHTFGWV KAAAKQIEYLWVKQSLHPEQWLMSLHRQVDKLDSVEELLLVFSDNVLTAGNRLAMREFGL SAAQFGQLTFASLFPTLAQRAVSVPLPLTTPQGRYHYRLREPTRRRVAVSAPPVMHLPFT SPREGEKLLRLLNAGIALCIEGETGSGKEYVSRTLHQHSRWRSGKFVAINCAAIPESLIE SELFGYQPGAFTGASKNGYIGKIREAEGGVLFLDEIGDMPLALQTRLLRVLQEKEVAPLG ASRSVPVNFALICATHRNLTQRVSAGEFREDLLWRLREYALALPPMREWPALETFIATLW RDLGGVSRRVTLSNALLVHLSQLPWPGNVRQLQSVLKVMLALADEGDTLTPDALPEAYRT APAQLPRGGLQAHDEQLIVDTLASVNGNVSRAAQILGIARSTLYRRAARTGRPRR >gi|289775900|gb|GG745510.1| GENE 60 64600 - 65196 770 198 aa, chain - ## HITS:1 COG:STM0865 KEGG:ns NR:ns ## COG: STM0865 COG0671 # Protein_GI_number: 16764227 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 4 195 2 196 202 134 40.0 1e-31 MNALETLNQSVFFALNAQPGAAEGLLSLARFCASGIVFMMPAIALGLWFLGGREGHRQAL FMTLAVMISLGLGMVCGTLWFHPRPFMIPLGHTWISHPADNSFPSDHATVMFSAAFALLS LRLRAPGLLMLLAALPVAWSRIYLGVHFPLDMVGAALVSIGGVIVAKRVWQAVGPRLVLL CEAVSRRMFSWLPARFTP >gi|289775900|gb|GG745510.1| GENE 61 65256 - 66173 1164 305 aa, chain - ## HITS:1 COG:XF1132 KEGG:ns NR:ns ## COG: XF1132 COG0583 # Protein_GI_number: 15837734 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 291 1 291 301 235 42.0 8e-62 MRDDLNAIPVFVTVVESGNFASAAAILHVTRSAVGKTIARLEARLGVALFQRTTRRQLLT EEGEQFYHQCREALARIREAEEALQRGKGEVQGRLRISLPVLFGQRCVAPVLFRLSQRYP LLKLELHYSDRQVNLLEEGFDLAVRIGNLADTGSLRARALGEHGMVLCAAVEYLRRQPPP QTIAGLSEHRTLGYLHNGQLQKWQLYDPQQGEVRFSPQTGLVQDDFAAIAAAVLQGMGIA WLPDWLVAQALADGTLQQVLAPSAQVRFAIHAVWPEGPWLPQKTRVTIDALREGLRLAKS TPPSG >gi|289775900|gb|GG745510.1| GENE 62 66277 - 66882 773 201 aa, chain + ## HITS:1 COG:YPO2323 KEGG:ns NR:ns ## COG: YPO2323 COG1182 # Protein_GI_number: 16122547 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Yersinia pestis # 1 197 1 198 201 175 48.0 4e-44 MANVLVLKSSINGETSLTNQLINEFLAARRAAGHRDRLTEHDLSAMALPTLDRPLFAALR GAVDPQPAIRAAVARSDQLIAELKASDLLVIGAPMYNLNVPTDLKKWFDLVARARETFRY TDSWPQGLVEGVRAVVVSSRGGIHQGETTDAITPYLRAVLGLMGIHEVEFIYAEGLDNRP HGRDAGIASARAQIAQLAVPA >gi|289775900|gb|GG745510.1| GENE 63 66958 - 67257 375 99 aa, chain + ## HITS:1 COG:STM2797 KEGG:ns NR:ns ## COG: STM2797 COG0640 # Protein_GI_number: 16766108 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 99 1 99 99 137 75.0 5e-33 MTTPEDLQARAGEAAALMKAMSNPHRLLILCMLCDAPRASAGELARATGLSPSATSQHLA RMRDEGLIDSERDAQRIHYFITHPAVQQVINTLKTLYCP >gi|289775900|gb|GG745510.1| GENE 64 67265 - 67795 468 176 aa, chain + ## HITS:1 COG:STM2798 KEGG:ns NR:ns ## COG: STM2798 COG0607 # Protein_GI_number: 16766109 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Salmonella typhimurium LT2 # 1 173 1 173 175 223 68.0 1e-58 MTIATLTPAEARALIAQGARLIDIRDADEYAREHIPDAELVPLASLTNGATLNARAGETV IFHCQAGSRTQNNAIRLAAAAAPAQASLLAGGIQGWRAAGFPVEEDKSQPLPLMRQVQIA AGVLILLGVLLGYTVSSGFFLLSGAVGAGLTFAGVTGFCGMARLLAIMPWNRRHEG >gi|289775900|gb|GG745510.1| GENE 65 67792 - 68694 992 300 aa, chain - ## HITS:1 COG:RSc1877 KEGG:ns NR:ns ## COG: RSc1877 COG3555 # Protein_GI_number: 17546596 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases # Organism: Ralstonia solanacearum # 1 297 2 299 300 414 64.0 1e-116 MKYIVLLIIVIAVLYVHYRGRVRYRFWRQLSDHSTFTAPLNGFMYLFSRVPNTPYLRPEM FPELAILQQNWQVIRDEGLHLQQLEQIKAADKYNDAGFNSFFKTGWKRFYLKWYEEAHPS ASQLCPHTTALLRDIPSVKAAMFATLPDGSRLPRHRDPYAGSLRFHLGLATPNDDRCFIE VDGQRYSWRDGEGVLFDETYIHYAENTSGENRLILFCDIERPMRYRWAQQVNHWLGRHLM SAASAPNDTGDRIGGINRAFRYIYQIRIVGKQLKKWNKTVYYIVKWLLFGGIAWLIWSAF >gi|289775900|gb|GG745510.1| GENE 66 68900 - 69079 316 59 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1071 NR:ns ## KEGG: Kvar_1071 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 59 1 59 59 95 100.0 5e-19 MFSVGDLVQPRAGGPKLKVVEVQGEQLVVVQAAQEQGERYTLNSEEVTPYQEEGDFGVC >gi|289775900|gb|GG745510.1| GENE 67 69158 - 69550 457 130 aa, chain - ## HITS:1 COG:STM2799 KEGG:ns NR:ns ## COG: STM2799 COG2916 # Protein_GI_number: 16766110 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Salmonella typhimurium LT2 # 1 130 4 133 133 153 66.0 6e-38 MLHKLNNIRSLRTLSREFSIDVLEEMLEKLRIVTEEKRTQQQLAAQQQAEYQEKVNTWLE LMRADGISPDDLVADIQPSMAVGKKRQPRPAKYRYTDHTGAEKTWTGQGRMPKPIAQAVA QGKSLDSFLI >gi|289775900|gb|GG745510.1| GENE 68 70288 - 70737 487 149 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1069 NR:ns ## KEGG: Kvar_1069 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 149 1 149 149 264 100.0 9e-70 MFSAHSRLRHAVADTFAMVVYCTVVNMMIEIFLSGMTFEQSLSSRLVAIPVNIIIAVPYG FYRDFAMRQARRISPAGWMKNMADVLAYVTFQSPVYVAILWSVGADWHQIVAAVSSNLAV SMMMGAAYGYFLDYCRRLFRVAPYQQAKA >gi|289775900|gb|GG745510.1| GENE 69 70814 - 71176 247 120 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1068 NR:ns ## KEGG: Kvar_1068 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 120 1 120 120 240 100.0 1e-62 MYLRPDEVARVLEKAGFTMDVVTQKAYGYRRGDNYVYVNREARMGRTALIIHPALKERSN MLAEPASDIKTCDHYEQFPLYLAGDAQQHYGIPHGFSSRMALERFLNGLFGEAQPAMSTN >gi|289775900|gb|GG745510.1| GENE 70 71326 - 71673 558 115 aa, chain + ## HITS:1 COG:STM2802 KEGG:ns NR:ns ## COG: STM2802 COG4575 # Protein_GI_number: 16766113 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 115 5 112 112 139 67.0 1e-33 MANHVNRNNFDENAEDIHNDVSQLADTLEEVLKSWGSDAKEEAEAARVKAQSLLKETRAR LNGHNRVQQAALDARQAACDALGCADTYVRNKPWHSVGAAAAVGVFIGVLLNLRR >gi|289775900|gb|GG745510.1| GENE 71 71792 - 73153 1139 453 aa, chain - ## HITS:1 COG:ECs3534 KEGG:ns NR:ns ## COG: ECs3534 COG1167 # Protein_GI_number: 15832788 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli O157:H7 # 6 448 1 443 444 587 67.0 1e-167 MEAIHLPLYQRIARQLKSAIERGELTPGSRLPASRVFAQEQGVSRATIENAWGELVAQGW LERRGQAGTFVSERLSPRQLAPVTPAQSAASTDPLPFQMGLPALDLFPRGLWARVMGRRL RTQSRFDLAPGDPGGDPLLRQAIVDYLRLSRSIDCQPEQVLITGNYATSMDLSLRTLAQP GEHMWMEDPGYPFIRPVVEARQLVVDAIPVDDEGMDVGWGLRHHPQARFALLTPAHQSPL GVALSLPRRRQLLAWATARDAWIIEDDYDSEFRYHGKPLPPVKSLDAPQRVIYAGTFSKS MFPALRTAWLVVPTSLAARFHQTAERQPCTVPTLWQQTLADFIQQGHFWRHLKKMRASYS QRRQWLESALQAQGFQVTPQQGGIQLVMPVSGNDRLLARQAVEAGLAVQALSDWRLRHAG EGGLLMSFTNIRSAAMADALARRLREAIANDGA >gi|289775900|gb|GG745510.1| GENE 72 73242 - 73673 721 143 aa, chain + ## HITS:1 COG:STM2804 KEGG:ns NR:ns ## COG: STM2804 COG2128 # Protein_GI_number: 16766115 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 143 1 143 143 206 72.0 9e-54 MSQLRQPFSELSPEVYKGLVQASIALEKSELGSALVELVYLRVSQINGCAFCLEKHSQAL RKGGMAQSKLDALAGWRVSAHFTPGERAALAWAESVTDIAASHAEDDVYLPLREHFTPRQ ISDLTFAISLMNAFNRLAVAMRL >gi|289775900|gb|GG745510.1| GENE 73 73857 - 74102 279 81 aa, chain + ## HITS:1 COG:STM2805 KEGG:ns NR:ns ## COG: STM2805 COG0695 # Protein_GI_number: 16766116 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 81 1 81 81 133 79.0 1e-31 MRIIIYTRNDCVQCHATRRAMESRGLAFEMVNVDQQPDAADTLREQGFRQLPVVIAGELR WSGFRPDMINRLRPSVTAASA >gi|289775900|gb|GG745510.1| GENE 74 74099 - 74509 464 136 aa, chain + ## HITS:1 COG:ECs3537 KEGG:ns NR:ns ## COG: ECs3537 COG1780 # Protein_GI_number: 15832791 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Escherichia coli O157:H7 # 1 135 1 135 136 233 82.0 5e-62 MSLIVYFSSRSENTHRFVQRLGLPAVRIPLNEREHLQVDEPYILIVPSYGGGGTAGAVPR QAIRFLNDVHNRQLIRGVIAAGNRNFGDAWGRAGEVIAQKCAVPYLYRFELMGTPDDIDN VRKGVSEFWQRQPQNV >gi|289775900|gb|GG745510.1| GENE 75 74611 - 76623 2640 670 aa, chain + ## HITS:1 COG:ECs3538 KEGG:ns NR:ns ## COG: ECs3538 COG0209 # Protein_GI_number: 15832792 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 670 45 714 714 1177 84.0 0 MTAQIQPNTLSFVSQEDKLTWLVREGYYDPQVLAGYDRAFVLALFAHARRAAFRFQTFLG AWKFYTSYALKTFDGKHYLEDFADRCVMVALTLAQGDDQQARQLMEEMLSGRFQPATPTF LNAGKQQRGELISCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRI ENQSSGVVPVMKMLEDAFSYANQLGARQGAGAVWLHAHHPDILRFLDTRRENADEKIRIK TLSLGVVIPDITFQLAKEDAQMALFSPYDVERLYGKPFADCAIGDLYPQLVADERVRKRW IRARDLFQRLAEIQFESGYPYIMFEDTVNRANPVAGRITMSNLCSEILQVSTPSTYDENL SYAHIGEDISCNLGSLNIAHTMDSPDFARTIATAVRALTAVSDMSDIQSVPSVAAGNAAS HAIGLGQMNLHGYLAREGIAYGSPEGLDFTNIYFYTVTWHALHTSMLLARERGQRFAGFE QSRYASGAYFDKYLQEEWQPKTERVRALFARAGIPLPDRESWRQLRDDVMRYGIYNRYLQ AVPPTGSISYINHATSSIHPIVSKIEIRKEGKTGRVYYPAPFMNNDNLALYQDAYEIGPQ KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWKKGIKTLYYIRLRQLALEGT EIEGCVSCAL >gi|289775900|gb|GG745510.1| GENE 76 76634 - 77596 1526 320 aa, chain + ## HITS:1 COG:STM2808 KEGG:ns NR:ns ## COG: STM2808 COG0208 # Protein_GI_number: 16766119 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Salmonella typhimurium LT2 # 4 320 3 319 319 545 85.0 1e-155 MTHLTRISAINWNRIDDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRV FTGLTLLDTIQNTVGAPALMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVD AAFAWSESCEPLQRKAQLMLGYYQADEPLKKKIASVFLESFLFYSGFWLPMHFSSRGKLT NTADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSRE LYGESGWFDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPAILAALSPNADENHDFFSG SGSSYVIGKTEETADDDWDF >gi|289775900|gb|GG745510.1| GENE 77 77954 - 79156 1514 400 aa, chain + ## HITS:1 COG:STM2809 KEGG:ns NR:ns ## COG: STM2809 COG4175 # Protein_GI_number: 16766120 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 400 1 400 400 713 92.0 0 MAIKLEIKNLYKIFGEHPNRAFKYIEKGLNKAQILEKTGLSLGVKDASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKMSDAELREVRRKKIAMVFQSFALMPH MSVLDNTAFGMALAGVPTAEREQKAREALRQVGLENYAHAWPDELSGGMRQRVGLARALA INPDILLMDEAFSALDPLIRTEMQDELIKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN GEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRSPVGLIRKTPGFGPRSAL KLLQDEDREYGYVIERGNRFVGIVSIDSLKTALSVGQGIEAALIDAPLAVEAQTPLSDLL SHVGHAPCAVPVVDEEQQYIGIISKRMLLQALDREGVNHG >gi|289775900|gb|GG745510.1| GENE 78 79149 - 80216 1402 355 aa, chain + ## HITS:1 COG:STM2810 KEGG:ns NR:ns ## COG: STM2810 COG4176 # Protein_GI_number: 16766121 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 355 1 354 354 537 87.0 1e-152 MADQTNPWDSAPATDSAAQAADAWGGASTAAPANGGGADWLHSAPAPQPESFNIMDPFHK TLIPLDSWVTHAIDWIVLHFRPLFQGIRVPIDYILSAFQQLLLGMPAPVAIIVFALIAWQ ISSLGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCMVIGLPLGIWLARSPRAAKI IRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIE ASRSFGASPRQLLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIG RLDMGLATVGGVGIVILAIILDRLTQAVGRDARSRGNRRWYTTGPLGLITRPFCR >gi|289775900|gb|GG745510.1| GENE 79 80295 - 81293 1626 332 aa, chain + ## HITS:1 COG:STM2811 KEGG:ns NR:ns ## COG: STM2811 COG2113 # Protein_GI_number: 16766122 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Salmonella typhimurium LT2 # 1 332 1 331 331 553 82.0 1e-157 MRHRTMMATAAFATLIATSTFAADLPGKGITVKPAQSTISEETFQTLLVSRALEKLGYTV EKPSEVDYNVAYTSIAAGDTTFIATNWQPLHDDMYAAAGGDNKFYRKGVYVSGAAQGYLI DKKTAEQYHITSIDQLKDPQIAKLFDTNNDGKADLTGCTPGWGCEAVINHQIDAYGLSKT VTHNQGNYAAMMADTIARYKEGKPVLYYTWTPYWVSDVLKPGKDVVWLQVPFSSLPGEQK NIDTKLANGANYGFPVNTMHIVANKAWAEKNPAAATLFSVMKLPIADINAENAMMHEGHA SEADINGHVDGWIKAHQPLFDSWVKAALAAQQ >gi|289775900|gb|GG745510.1| GENE 80 81477 - 82223 806 248 aa, chain + ## HITS:1 COG:ECs3544 KEGG:ns NR:ns ## COG: ECs3544 COG1296 # Protein_GI_number: 15832798 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Escherichia coli O157:H7 # 1 247 1 244 245 355 81.0 4e-98 MENPAPLTCALPERVATVGEGIKDSLPIVISYLPVAFAFGLNATRLGFTPLESLFFSCII YAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRIRSALDKKKTALWAFGL TDEVFAAATARLVRDNRRWSENWMLGLAFTSWASWVCGTLAGAWSGNGLLVDYPAVEAAL GFMLPALFMSFLLASFQRQQSLCVTAALAGALGGILLFSIPAAILAGIVCGCLTALVQAM LKGMPDEQ >gi|289775900|gb|GG745510.1| GENE 81 82213 - 82548 423 111 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1056 NR:ns ## KEGG: Kvar_1056 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 111 1 111 111 181 100.0 6e-45 MNSEVLLLGVIVGSVNYLFRYLPLRLRAGHARPARRGPVSVLLDTIGIASICALLVVSSV PEILADAHRLAPTLIGFLVLGAAFWKTRSIIVPTLLSALAYGLAWKITSGL >gi|289775900|gb|GG745510.1| GENE 82 82639 - 83169 647 176 aa, chain + ## HITS:1 COG:STM2813 KEGG:ns NR:ns ## COG: STM2813 COG1846 # Protein_GI_number: 16766124 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 289 92.0 2e-78 MDSSFTPIEQMLKFRASRHEDFPFQEILLTRLCMHMQGKLLENRNKMLKAQGINETLFMA LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK GHQFLREVLPPQHNCLHQLWSSLSTSEKDQLEHITRKLLSRLDQMEEEGVLADSLR >gi|289775900|gb|GG745510.1| GENE 83 83295 - 84467 1651 390 aa, chain + ## HITS:1 COG:STM2814 KEGG:ns NR:ns ## COG: STM2814 COG1566 # Protein_GI_number: 16766125 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 390 1 390 390 592 85.0 1e-169 MSANAESQTPQQPGSKKGKRKGALLLLTLLFIIIAVAYGIYWFLVLRHYEETDDAYVAGN QVQIMAQVSGSVTKVWADNTDYVQKGDPLVTLDQTDAQQAFEKAKTQLAASVRQTRQQMI NSKQLQANIDVKKTALAQAQADLNRRIPLGAANLIGREELQHARDTVASAQAELDVAIQQ YNANQAIVLGTKLEQQPAVLQAATEVRNAWLALQRTQIVSPISGYVSRRSVQPGAQIGTT TPLMAVVPATNLWIDANFKETQLAHMRIGQPATVISDIYGDDVKYTGKVVGLDMGTGSAF SLLPAQNATGNWIKVVQRLPVRIELDEKQLAEHPLRIGLSTLVEVNTTDRDGEMLASQVR SSPVYESNAREIALEPVNKLIDEIIQANAG >gi|289775900|gb|GG745510.1| GENE 84 84483 - 86021 1992 512 aa, chain + ## HITS:1 COG:STM2815 KEGG:ns NR:ns ## COG: STM2815 COG0477 # Protein_GI_number: 16766126 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 502 1 502 512 888 92.0 0 MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGV ANAISIPITGWLAKRVGEVKLFVWSTVAFAIASWACGVSNSLTMLIFFRVIQGIVAGPLI PLSQSLLLSNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGIA VVIMTLQTLRGRETRTEQRRIDGVGLALLIIGIGSLQVMLDRGKELDWFASNEIIILTIV AVVAISFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYG YTATWAGLASAPVGVIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAWTFEPGMD FGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTM WTNREALHHAQLTESVTPFNPNAQQMYDQLQGMGMTQQQASGWIAQQITNQGLIISANEI FWVSAGIFILLLSLVWFARPPFSAGGGGGGAH >gi|289775900|gb|GG745510.1| GENE 85 86158 - 87834 2110 558 aa, chain + ## HITS:1 COG:RSp0322 KEGG:ns NR:ns ## COG: RSp0322 COG0119 # Protein_GI_number: 17548543 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Ralstonia solanacearum # 1 549 1 549 576 613 54.0 1e-175 MLSHPAEKYRPYPPIALPDRRWPDRQISHAPRWLSTDLRDGNQALAEPMDSARKLQFWDL LLECGFKEIEVAFPSASQTDFNFVRQLIDEQRIPEDVTIQVLTQARDPLILRTFEALRGA RQATVHLYNATAPLFRELVFGMDKAEVIALATRATRLIRQQCEQQPETRWQYEYSPETFC FTEPEFALEICEAVADVWQPCAERPMIVNLPATVEVNTPNVYADQIEYFCRHFSRRGEVC ISVHPHNDRGTGVASAELAVMAGADRVEGCLFGNGERTGNVCLVTLAMNLYSQGIDPELR FEQMNRVVEVVENCNQIPVHPRHPWAGSLAYTAFSGSHQDAIKKGFDARQPGDPWQMPYL PIDPQDIGCSYEAVIRVNSQSGKSGSAWLIEQNHGLKLPRGLQQDFSQHVQQVTDSDGKE MTHHALWQLFRTRYGLLAQPALTLLDYQSASQQDGQLSLQATLRHHGETRRLQGQGNGLL SAAASGLSALLRQPFMIKDYHEHTLGARSDSRSVAYIRCVFPQGESYWGVGIDNDVARAS LQALCNAISVADQVEGRK >gi|289775900|gb|GG745510.1| GENE 86 87813 - 88538 856 241 aa, chain - ## HITS:1 COG:PA1235 KEGG:ns NR:ns ## COG: PA1235 COG2207 # Protein_GI_number: 15596432 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 3 237 14 248 260 244 54.0 8e-65 MPFAHDYAHGDQEDWHQHDCAQLLHILSGVVRVATPAGYWVVPPGRGVWLPAGTPHALRM TGNVAARTLFIDPLARADLPAGCQIVQITPLLRELIVSSLGLAECYAPASRDERIYELIL DEIRGMAILPFGLPEPQSDTLRRLCQQVREAPGEAWSSGQAAKVCSMSERTLNRHFQQQT SLTWSEWVRRAKLMEALIRLAQGHSVLRVALELGYGSHSAFSAMFRRVMGVAPSDYFRPS T >gi|289775900|gb|GG745510.1| GENE 87 88633 - 89148 652 171 aa, chain - ## HITS:1 COG:STM2817 KEGG:ns NR:ns ## COG: STM2817 COG1854 # Protein_GI_number: 16766128 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 333 92.0 1e-91 MPLLDSFTVDHTRMEAPAVRVAKKMNTPHGDEITVFDLRFCVPNQEVMPERGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMADVLKVKDQNQI PELNVYQCGTYTMHSLEEAQDIARHIIERDVRINSNDELALPKEKLQELHI >gi|289775900|gb|GG745510.1| GENE 88 89312 - 90868 2006 518 aa, chain - ## HITS:1 COG:STM2818 KEGG:ns NR:ns ## COG: STM2818 COG2918 # Protein_GI_number: 16766129 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Salmonella typhimurium LT2 # 1 518 1 518 518 974 88.0 0 MIPDVSQALAWLEKHPQALQGIQRGLERETLRVNADGTLATTGHPLALGSALTHKWITTD FAEALLEFITPVDGDIEHMLTFMRDVHRYTARQLGDERMWPLSMPCYIAPGQDIELAQYG TSNVGRLKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGVEDVESGKEAISAGY FRSIRNYYRFGWVIPYLFGASPAICSSFLQGKPTTLPFEEAGNGMYYLPYATSLRLSDLG YTNKSQSNLGITFNDLHEYVAGLKRAIKTPSEEYAKIGLQKDGKYLQINSNILQIENELY APIRPKRVTRRGETPSDALLRGGIEYIEVRSLDINPFSPIGVDAQQVRFLDLFMVWCALA DAPEMSSDELLCTRTNWNRVILEGRKPGLTLGIGCESAQFPLAQVGKDLFRDLRRVAQTL DSIHGGQAYQQVCDELLACFDDPELTFSARILRSMIEEGIGGTGRALADRYRTQLREEPL EILSEADFIAEREASVARQKKVEAEDSEPFEALLARHA >gi|289775900|gb|GG745510.1| GENE 89 90935 - 91276 252 113 aa, chain - ## HITS:1 COG:yqaA KEGG:ns NR:ns ## COG: yqaA COG1238 # Protein_GI_number: 16130601 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 113 30 142 142 167 84.0 3e-42 MAMLLAGVSHPWWLVLIATIGNSLGGVTNVILGRLFPLRKTSRWQERAAGWLKRYGAVTL LLSWAPVVGDLLCLLAGWMRISWGPVLFFLCLGKALRYIVIAAATLQGMTWWH >gi|289775900|gb|GG745510.1| GENE 90 91360 - 91926 669 188 aa, chain - ## HITS:1 COG:yqaB KEGG:ns NR:ns ## COG: yqaB COG0637 # Protein_GI_number: 16130602 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 188 1 188 188 327 84.0 1e-89 MYEGYAGLIFDMDGTILDTEPTHRQAWNEVLGRYGMRFDEQAMVALNGSPTWRIAQAIIE LNQADLDPHRLAQEKTQAVKAMLLDSVRPLPLIEVVKAWHGRRPMSVGTGSESAVAEALL AHLGLRHYFSAVVAADHVVNHKPAPDTFLLCAERMGVAPEKCVVFEDADFGLQAAKRAGM DAVDVRLL >gi|289775900|gb|GG745510.1| GENE 91 92052 - 92366 482 104 aa, chain - ## HITS:1 COG:YPO2202 KEGG:ns NR:ns ## COG: YPO2202 COG2823 # Protein_GI_number: 16122430 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Yersinia pestis # 1 104 1 104 104 111 58.0 4e-25 MKWFKAIPAFCATLLVATALTGCAGSSTKESTGGYIDDTVVTTKVKTALFNDKDIKSSEI SVQTFKGRVQLSGFVSSAESAKRAVEVTRRVQGVRMVENDLRIK >gi|289775900|gb|GG745510.1| GENE 92 93821 - 94006 204 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 60 1 60 61 83 61 2e-14 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS Y >gi|289775900|gb|GG745510.1| GENE 93 94371 - 96998 3429 875 aa, chain - ## HITS:1 COG:STM2827 KEGG:ns NR:ns ## COG: STM2827 COG0013 # Protein_GI_number: 16766133 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 875 1 875 876 1597 91.0 0 MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENW FALPKEKLWVTVYETDDEAFDIWANEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCG PCTEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG LERIAAVLQHVNSNYDIDLFRDLIASVAKVTGATDLTNKSLRVIADHIRSCAFLIADGVI PSNENRGYVLRRIIRRAIRHGNMLGAKDTFFWKLVAPLIAVMGSAGEELKQQQAQVEQVL KTEEEQFARTLERGLALLDEELSKLKGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV DEAGFEAAMEEQRRRARESSGFGADYNAMIRVDGVSEFKGYDHLELNGKVTALFIDGKAV DSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKYGQAIGHIGKVASG SLKVGDAVQADVDEARRQRIRLNHSATHLMHAALRQVLGTHVAQKGSLVNDKALRFDFSH FEAMKPEEIRAVEDLVNAQIRRNLAIETNIMDIDAARASGAMALFGEKYDDRVRVLQMGD FSTELCGGTHAARTGDIGLFRITSESGTAAGVRRIEAVTGEGAIAMLHAQSDQLSDIAQL LKGDSHNLGEKVRAALERTRQLEKELQQLKEQAAAQESANLSSKAEEINGVKLLVSELAG VEPKMLRTMVDDLKNQLGSTVVVLATVADGKVSLIAGVSKDVTDRVKAGELVGMVAQQVG GKGGGRPDMAQAGGTDASALPAALASVKGWVSAKL >gi|289775900|gb|GG745510.1| GENE 94 97250 - 97750 553 166 aa, chain - ## HITS:1 COG:oraA KEGG:ns NR:ns ## COG: oraA COG2137 # Protein_GI_number: 16130605 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 166 1 166 166 253 78.0 1e-67 MTEPSSRRSGYARLLDRAIRILAMRDHSEQELRRKLAAPVMSKNGPEALDVTPEELEQVV AWCIENRYLDDHRFVGQFIASRSRKGYGPARIRQELSQKGIARQDVEQAMRECDIDWVSL AREQAQRKYGEPLPSAFTEKVKVQRFLLYRGYLMEDIQEIWRNFAD >gi|289775900|gb|GG745510.1| GENE 95 97821 - 98879 1500 352 aa, chain - ## HITS:1 COG:STM2829 KEGG:ns NR:ns ## COG: STM2829 COG0468 # Protein_GI_number: 16766135 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Salmonella typhimurium LT2 # 1 352 1 353 353 634 95.0 0 MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQP DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG SETRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIG QGKANAITWLKENPAAAKEIEKKVRELLLNNQDSTPDFAVDGNDAEETEQDF >gi|289775900|gb|GG745510.1| GENE 96 98970 - 99467 299 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 3 157 746 898 904 119 46 2e-25 MTDSELMQLSEKVGRALKARGATVTTAESCTGGWIAKAITDIAGSSAWFERGFVTYSNEA KSQMIGVSEATLRENGAVSEPVVVEMAIGALRAARADYAISVSGVAGPDGGSDEKPVGTV WFGVASVSGQGVTRRECFAGDREAVRRQATAYALNLLWQQFLQNT >gi|289775900|gb|GG745510.1| GENE 97 99606 - 100484 1031 292 aa, chain - ## HITS:1 COG:mll8313 KEGG:ns NR:ns ## COG: mll8313 COG0803 # Protein_GI_number: 13476864 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mesorhizobium loti # 24 291 29 310 313 238 45.0 8e-63 MKRSAMVVALALGLMAQGAMAKTLNVVSSFSVLGDMVQQVGGEHVHVDTLVGPDGDPHTF EPSPKDSALLSKADVVVVNGLGLEGWLDRLIKASGFKGELVVASKGVKTHTLDEDGKTVT DPHAWNSAANGALYAQNILDGLVKADPEDKAALTSSGKRYIEQLTNIDGWAKAQFSAIPL AKRKVLTSHDAFGYFGRAYNVTFLAPQGLSSESEASAAQVAALIKQIKADGVHTWFMENQ LDPRLVKQIASATGAQPGGELYPEALSAPGGVADSYVKMMRHNVALIAASMK >gi|289775900|gb|GG745510.1| GENE 98 100492 - 101355 1099 287 aa, chain - ## HITS:1 COG:NMA0790 KEGG:ns NR:ns ## COG: NMA0790 COG1108 # Protein_GI_number: 15793764 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Neisseria meningitidis Z2491 # 9 284 10 284 291 228 55.0 9e-60 MIWHTFFQPFIEFGFMRRALVVCLALSLSTTMLGVFLLLRRMSLMGDALSHAILPGVAVG YLLSGMSLLAMTLGGFIAGIVVALVAGWVSRRTPLKEDASFAGFYLGSLALGVTLVSLRG SSVDLLHLLFGSILAVDRDAALFVSGVASLTLLCIALCYRGLVSEAFDSAWLQVNHPRLP ALLHGLFLALLVLNLVAGFQVLGTLMAVGVMMLPAVAARCWARTLPGILLLAALSGALCA WLGLSLSWAASLPAGPAIVLTASALFFISLFFGTHSRLLIGWRKLMG >gi|289775900|gb|GG745510.1| GENE 99 101352 - 102029 182 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 190 1 200 245 74 28 8e-12 MIELEQLVAGYDGVAITPPLSGMICPGSLTAIVGLNGCGKSTLLKTLAGFLPPVSGRLRW QGKRPVIGWLAQRHALESQFPLNVQDVVSQGAWPGVSLLRGLGGDTRRRISAVLERVGLA GLAKSPIEALSGGQFQRMLFARVMVQQAPLVMLDEPFTGIDEATCRELMELILEMHQQGQ TILAVLHDNQRVADFFPETLLLTSQRACWGVTRAVLPAFSHARSA >gi|289775900|gb|GG745510.1| GENE 100 102026 - 102133 89 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFTSVFMASGATRATIAGVLLVALWLATWWAVALP >gi|289775900|gb|GG745510.1| GENE 101 102914 - 103993 1550 359 aa, chain - ## HITS:1 COG:STM2831 KEGG:ns NR:ns ## COG: STM2831 COG2951 # Protein_GI_number: 16766137 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Salmonella typhimurium LT2 # 1 356 1 357 359 639 86.0 0 MLKRRYLALLPLCVLLAACSSKPKTPAETEMASGTGGFLLEPQHNVMQMGGDFANNPAAA QFIDKMVAKHGFDRQQLQEILSQAKRLDYVLRLMDRQAPTGLPPTGPTGAWLRYKKQFIT PDNVQNGVVFWNQYQDALNRAYQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSF SYPRRAEYFSSELETFLLMARSESDDPLDLKGSFAGAMGYGQFMPSSYKQYAVDFNGDGH INLWDPVDAIGSVANYFKQHGWVSGDLVAVQALGQAPGLENGFKTKYSVSQLAAAGLTPT QPLGNHQQASLLRLDVGTGYEYWYGLPNFYTITRYNRSTHYAMAVWQLGLAVSQARGGY >gi|289775900|gb|GG745510.1| GENE 102 104271 - 104834 899 187 aa, chain + ## HITS:1 COG:STM2832 KEGG:ns NR:ns ## COG: STM2832 COG3730 # Protein_GI_number: 16766138 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 345 93.0 3e-95 MIDVVTHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQQRIEKLAQRC AGNPLTRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG ELFVYLGIANGLTTLGLPLGPLAVSYLLVGLVTNFFRGWVTDLTTSIFEKKMAIQLARKV HLSGATS >gi|289775900|gb|GG745510.1| GENE 103 104831 - 105802 1476 323 aa, chain + ## HITS:1 COG:STM2833 KEGG:ns NR:ns ## COG: STM2833 COG3732 # Protein_GI_number: 16766139 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Salmonella typhimurium LT2 # 1 323 1 323 323 546 90.0 1e-155 MTRIRIEKGTGGWGGPLELDVVEGKKIVYITAGTRPAIVDRIASLTGWQAVDGFKEGEPA ESEIGIAIIDCGGTLRCGLYPKRRIPTINIHATGKSGPLAQYIVEDIYVSGVKEENIKLL EDSGETAAQPLPAAGRDYDASKKITEQSDGLLAKVGMGMGSVVAVLFQAGRDTIDTVLKT ILPFMAFVSALIGIIMASGIGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVL VSRFLTGAPTVLIAWFVSGFIYQ >gi|289775900|gb|GG745510.1| GENE 104 105816 - 106178 509 120 aa, chain + ## HITS:1 COG:STM2834 KEGG:ns NR:ns ## COG: STM2834 COG3731 # Protein_GI_number: 16766140 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 120 1 120 120 184 80.0 4e-47 MTVIYHTTITRIGACATMALEEQMLITFREGAPADIEEYCFIHNHGELAGPLTPGAELQL GDRRYPVTAVGEVAEQNLRELGHITLRFDGHREAEFPGTVHVAGPVPDAIATGCVLKFVA >gi|289775900|gb|GG745510.1| GENE 105 106191 - 106970 1049 259 aa, chain + ## HITS:1 COG:ECs3561 KEGG:ns NR:ns ## COG: ECs3561 COG1028 # Protein_GI_number: 15832815 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 459 92.0 1e-129 MNQVAVVIGGGQTLGEFLCRGLAAEGYRVAVVDIQSEKASRVAQEINAEYGEGTAYGFGA DATSEASVTALAHGVDEIFTRVDLLVYSAGIAKAAFISDFALGDFDRSLQVNLVGYFLCA REFSRLMIRDGIKGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH SLMLGNLLKSPMFQSLLPQYATKLGIDESEVEQYYIDKVPLKRGCDYQDVLNVLMFYASP QASYCTGQSINVTGGQVMF >gi|289775900|gb|GG745510.1| GENE 106 107589 - 107948 303 119 aa, chain + ## HITS:1 COG:ECs3562 KEGG:ns NR:ns ## COG: ECs3562 COG4578 # Protein_GI_number: 15832816 # Func_class: K Transcription # Function: Glucitol operon activator # Organism: Escherichia coli O157:H7 # 1 117 1 117 119 184 76.0 2e-47 MVTTLITVAAIAWLTQLAFGGWQIRRFNRAFDSLCQQGRVGVGRSSGRFKPRAIVAIAVD ENDRICDTLLMKGLTVFASPQKIPTLTGKHLKELQPDVIFPNDPLCQNALSLALNPKHA >gi|289775900|gb|GG745510.1| GENE 107 108016 - 108789 950 257 aa, chain + ## HITS:1 COG:STM2837 KEGG:ns NR:ns ## COG: STM2837 COG1349 # Protein_GI_number: 16766143 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 465 91.0 1e-131 MKPRQRQAAILEHLQSQGKCSVEELAQHFDTTGTTIRKDLVILENAGTVIRTYGGVVLNK DEADPPIDHKTLINTHKKAQIAEAAVRYIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT NSLHIVNALSEFDNEQTILMPGGTFRKKSASFHGQLAENAFEQFSFDKLFMGTDGIDLVA GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNIVCGLERVDKLITDADIDPEFQR ALEAKGIEVIITGEHHE >gi|289775900|gb|GG745510.1| GENE 108 108782 - 109747 1373 321 aa, chain + ## HITS:1 COG:gutQ_1 KEGG:ns NR:ns ## COG: gutQ_1 COG0794 # Protein_GI_number: 16130615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 14 205 1 192 192 340 90.0 3e-93 MSNFLLEAGRQTLMLELQEASRLPERLGDDFIRAAETIIHCEGKLIVSGIGKSGHIGKKL AATFASTGTPAFFVHPAEALHGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKSIPLL AMTGKSTSPLALAAKAVLDIAVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARGFNEE DFARSHPAGALGARLLNKVHHLMRRDEEVPRVDAGANVMDAMLELSRTGLGLVAVCDETN RVQGVFTDGDLRRWLVAGGTLNDSVTRAMTRNGVTLQAESRAVEAKERLMKHKISAAPVV DENGQLVGAINLQNFYQAGIL >gi|289775900|gb|GG745510.1| GENE 109 109710 - 111260 1826 516 aa, chain - ## HITS:1 COG:ygaA KEGG:ns NR:ns ## COG: ygaA COG3604 # Protein_GI_number: 16130616 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli K12 # 1 506 26 528 529 745 80.0 0 MSFSVDELARIAIDLQSDIGHTDRFSRLITTLRQILGCDASALLRYEAHQFVPLAIDGLA QDVLGRRFALEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGHESLKVHACVGLPLFA GQTLIGALTLDGMDADRFDSFSDEELRLIAALVAGALNNALLIARLEAQNVLPAQPVNYA QPERQEIIGLSAPMLQLKKEIDIVAASDLNVLISGETGTGKELVAKAVHQGSTRAANPLV YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLRQEVVEGRFRADLYHRLSVFPLSVPALRD RDSDVVLLAGYFCEQCRLRMGLARVILSEAARNRLQQWSWPGNVRELEHAIHRAVVLARA TQAGDEVVLEPQHFQFAVAAPMLPTETAAAAPAMEKVNLREATDSFQREAISRALEANQR NWAATARALELDVANLHRLAKRLGLKGSPPGKNSAG >gi|289775900|gb|GG745510.1| GENE 110 111448 - 112902 1966 484 aa, chain + ## HITS:1 COG:STM2840_1 KEGG:ns NR:ns ## COG: STM2840_1 COG0426 # Protein_GI_number: 16766146 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Salmonella typhimurium LT2 # 1 394 1 394 394 799 95.0 0 MSIAVKNNILWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFV QNLRSEIDLADLDYIVINHAEEDHAGALTELMMQIPDTPIYCTANAIDSINGHHHHPEWN FHVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFND EVDQIELYEQCQRYYANILTPFSRLVTPKITEILGFNLPVEMIATSHGVVWRDNPTQIVE KYLEWAADYQEDRITIFYDTMSNNTRMMADAIAQGITEVDPRVAVKIFNVARSDKNDILT NVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRL QDAGFEMSLSLKAKWRPDIDALELCRQHGRDIARQWALSPLPVAEAATTPEQQDCACAAA AAAAADLGPMMQCSVCQWVYDPAKGEPNQDVQPGTPWSEVPDNFLCPECSLGKDVFDVLA TEAK >gi|289775900|gb|GG745510.1| GENE 111 112899 - 114032 1454 377 aa, chain + ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 375 1 375 377 573 77.0 1e-163 MSDGIVIIGSGFAARQLVKNIRKQDTQIPLTLIAADSMDEYNKPDLSHVISRGQKADDLT LQSAGEFAEQYNLRLFPHTWVSDIDAEKRLVKSQDNQWRYDKLVLATGATPFIPPVPGRE LMLTLNSQREYGAAQSQLHDAKRVLIVGGGLIGCELAMDFCRAGKAVTVVDNSASVLAAL MPPEASSRLQHRLTEMGVHLMLKAQLEGLEQTADGIRVSLDRQRAITVDAVVAAAGLRPE TSLARHAGLQINRGVVVNNQLQTSDPAIYALGDCAEINGTVLPFLQPILLSAMCLSKNLL AQAGELKLPPMLVKVKTPDLPLHLAGDTRRDDLTWNIVAAKEGLVAKGLDAENQLRAFVV SEDKMKEAFALLKQLVS >gi|289775900|gb|GG745510.1| GENE 112 114227 - 115174 852 315 aa, chain - ## HITS:1 COG:AGpA470 KEGG:ns NR:ns ## COG: AGpA470 COG0111 # Protein_GI_number: 16119555 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 306 25 334 354 229 38.0 6e-60 MSAKNVILITGSDLAAAALEMLEDYELVFAGRQPTESQLIALCQQHNPLAILVRYGKITA AVMDAAPALKVIAKHGSGIDVIDVEAATARGIMVRAATGANAAAVSEHTWALILACAKSV IPLDRRLREGHWDKSTHKSLELEGRTLGLVGLGAIGSRVAKIAVAFGMKVLAYDPYAKTV PPECERVDELKDLLMQADVLSLHCPLTQHNRGMINAATLAQCKPGAILVNTARGGLIDDV ALAAALKAGTLRWAALDSFHSEPLTTPHIWQAIDNVILSPHVGGVSDASYVKMGTAAAAN ILQVLQESAQTETTF >gi|289775900|gb|GG745510.1| GENE 113 115171 - 115866 679 231 aa, chain - ## HITS:1 COG:RSp1231 KEGG:ns NR:ns ## COG: RSp1231 COG0684 # Protein_GI_number: 17549452 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Ralstonia solanacearum # 27 207 17 197 216 137 42.0 2e-32 MPASQQKLINFDIARVDAEEVRQAAEFQAAILADVAGRRGTLHGRIKPLAPHMAVAGPAI TVEVRPGDNLAIHAAMAVAKPGDVLVIDGKGDLSCALLGEIMATQAQASGIAGIIIDGAV RDAETLSNQRFPVFAAGLNPCGPTKFIPGRVNHAISVGGAAVQAGDLVVGDIDGVVVIPR DEVRTIIELAKGKLAMESKRLVAIRDGDLRPHWLESALRQAGMLSEGETLP >gi|289775900|gb|GG745510.1| GENE 114 116033 - 116749 780 238 aa, chain + ## HITS:1 COG:BH1819 KEGG:ns NR:ns ## COG: BH1819 COG1414 # Protein_GI_number: 15614382 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 9 224 8 248 252 81 29.0 2e-15 MGNEGVIAVEKALALLDCFRPGNDSLTLTELAQLSGYHKTTVYRLMNSLERMNYIIRHDD GTYTLGHRLLYLGKLYEQSFELARVVQPELQALSQASSESASWYVIEGGQRLCLFRAEAS QGLRHSNLPGSQFPLDGSAISKVLRHWGLGESLQEDEPTLPFYTSGARDPHTAAFAMPVF GVHDKLIAALALTGPASRLTEDRKENGISQLMQETANRLSLKLGASKPFCERFYGLKE >gi|289775900|gb|GG745510.1| GENE 115 116789 - 118144 1307 451 aa, chain - ## HITS:1 COG:RSp0182 KEGG:ns NR:ns ## COG: RSp0182 COG0477 # Protein_GI_number: 17548403 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 23 396 26 401 453 296 42.0 5e-80 MKPCEETMTDQLPNRATDNDALEKETMRRVIWRILPFLVVSYLVSIIDRGNIGMAALQMN EDLGLSKAAFGFASSLYFVAYFIFEVPSNLAMQKVGARLWIPRIMISWGVVSMCMALVQN TTSLYIVRFLLGAAEAGFFPGVVLYLTWWIPSRYRARIIASFMVAIPLANFIGSPLSGLI LMLDGWLGLRGWHLLFIIEGLPAVLLGIAAFFILRDRPHQAAWLNDRQKTWLENTLQAER QQQKQIGHTTTWQLLKHRQIWLMALIYAGASSAGTTLSVWSPQLLKSFHLDNLTTGLLNA IPYGLASVLMIVWGRSSDRNNERRWHTALTLFMIAAGVFAAFINLSLPATIMILSTILIG AYAAKGPFWALASGWMSSTSAAAGLAAIGAIANLIGGAVMVNAYGIISERTGSHTLAMLP LAALCLAGGIAVLAMGRRYSQTARQEKQMTH >gi|289775900|gb|GG745510.1| GENE 116 118635 - 119648 1154 337 aa, chain - ## HITS:1 COG:STM2783 KEGG:ns NR:ns ## COG: STM2783 COG3376 # Protein_GI_number: 16766094 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity nickel permease # Organism: Salmonella typhimurium LT2 # 11 335 8 333 337 367 62.0 1e-101 MIMTVLRQQPRAAGLVLGLIAANLLAWCWALQAFGDSGALMAASLLAWGYGLRHAVDADH IAAIDNVTRKMMQQGRRPFAVGAWFSLGHSSIVVLASAAIAATATAFSAQMSWLHDTGSV IGTAVSALFLLAMAFINLVILRSVWRSFRAWKRGEKVSDEIVSGGGVMSWLFGKTFRLVS RSWQMYLVGFLFGLGFDTATEIGVLGISAAGASSGISVWSIMVFPALFASGMALVDTLDN VLMVGAYGWAFSKPQRKLYYNMTITGTSVVVALFIGGLEALGLLMDKFALSGGIWRWVGM LNDNLGDAGFVVVGLFVACWALSVLNYRWRGYDNLAR >gi|289775900|gb|GG745510.1| GENE 117 119645 - 121879 1877 744 aa, chain - ## HITS:1 COG:STM2842 KEGG:ns NR:ns ## COG: STM2842 COG0068 # Protein_GI_number: 16766148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 2 740 7 745 746 1060 73.0 0 MNGVQIRIRGKVQGVGFRPFVWQLARRQARCGDVCNDGDGVLVRLAGGDDGFTAALADHC PPLARIDSTDCTPYCWTATPQDFTIRESGAGCMRTQIVPDAATCPACLAEMNDPRARRYR YPFINCTHCGPRLTIIRAMPYDRPFTAMAPFPLCSPCEAEFRDPADRRFHAQPVACPDCG PRLEWRAEGETLNSEAALQAAITRLAAGDIVAIKGIGGFHLACDAGNPTAVATLRARKHR PAKPLAVMLPSAAGLPADAAALMGSPAAPIVLIAKAQVSGLCDEIAPGLAEVGVMLPSNP LQHLLLQALARPIVMTSGNLSGRPPALSNAQALNDLADIADGFLLHNRDILQRMDDSLVR SSGEMLRRARGYVPDALPLPPGLRDIPPLLALGADMKNTFCLARGSEAVLSQHFGDLGEE GVEQQWRSTLQLIQSIYAFVPQRVVVDAHPGYRSTQWAASLSLPVETVLHHHAHAAACLA EHRWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRQCEHLGGLPAVALPGGDLAARQ PWRNLLAQCLAFVPDWQDYPQTAPLRQRNWPLLAQAIDRGINAPRASSCGRLFDAVACAL DCAPESLSYEGEAACRLEALAVSCPGVSHPVTLPWRDDVLDLATFWRQWLNWQATPAQKA WAFHDALACGLAAMARDCATARGIETMVCSGGVLHNRLLAARLTFYLADFTLLFAQQLPA GDGAIAYGQAVIAAARGQAQGTQQ >gi|289775900|gb|GG745510.1| GENE 118 121888 - 122415 673 175 aa, chain - ## HITS:1 COG:STM2843 KEGG:ns NR:ns ## COG: STM2843 COG1142 # Protein_GI_number: 16766149 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Salmonella typhimurium LT2 # 1 173 1 173 181 275 90.0 4e-74 MNRFIIADASKCIGCRTCEVACVVSHQEHQDCAALTPHTFQPRIHVIKGVNVSTATACRQ CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRHSGAGLN VVAEKAEANKCDLCFHRESGPACMEVCPTHALVCVDRNKLEQMNIEKRRRTALAW >gi|289775900|gb|GG745510.1| GENE 119 122551 - 123564 1207 337 aa, chain - ## HITS:1 COG:ECs3570 KEGG:ns NR:ns ## COG: ECs3570 COG1609 # Protein_GI_number: 15832824 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 333 2 334 337 518 74.0 1e-147 MATMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFKAVAESGYRPNLLARNLATKTTQ TLGLVVTNTLYHGVYFSELLYHVARMTEDKGRQLILADGKHSAQEEREAIQYLLDLRCDA IIIYPRFLTVDEMDEIVENHSQPIMVLNRRLRRHASHCVWSDQKASAMRVVERLIALGHR DIAFITGSLDSPTGVERLAGYKDALAGHGVALNEALIAQGRWTPETGAAAVEILRQRGVT YSALVASNDDMAIGAMKQLHQLGVKVPDQVSVVGFDDIVLAPYMVPSLASVRVPVTEMIK ESINRLIFMLDGGEFNFQQSFPGALIERDSLVSGPCA >gi|289775900|gb|GG745510.1| GENE 120 123832 - 125274 1912 480 aa, chain + ## HITS:1 COG:ECs3571_2 KEGG:ns NR:ns ## COG: ECs3571_2 COG1263 # Protein_GI_number: 15832825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 91 473 2 384 396 597 92.0 1e-170 MSKNYAALAQQIVAAIGGVDNVAAVTHCMTRLRFVVKDDEKVDSPTLKGLTGVLGVVRSD NQCQVIIGNTVSQAYREVVNLLPGDLRPAEPQGKAPLTLKRIGAGILDALIGTMSPLIPA IIGGSMVKLLAMILEMSGALPKGSPTLTLLTLIGDGAFFFLPLMVAASAAVKFKTNMSLA IAIAGVLVHPGFIELMAKAAQGEHVEFAFIPVTAVKYTYTVIPALVMTWCLSYIERWVDR ITPAVTKNFLKPMLIVLIAAPLAILLIGPLGIWIGSAISALVYTIHSYLGWLSVAIMGGL WPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQT ALAAAASAILAGISEPALYGVAVRLKRPLIASLISGFICGAVAGIAGLASHSMAAPGLFT SVQFFDPANPMTIVWVFGVMALSVVLSFALTLILGFEDIPVEQAAADAIARQARAQASHA >gi|289775900|gb|GG745510.1| GENE 121 125301 - 126725 2040 474 aa, chain + ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 474 1 474 474 891 86.0 0 MASFPQGFLWGGALAANQSEGAYLEGGKGLTTVDTLPHGAHRLPVKLGLEKRFTLREDEF YPSHEAIDFYHRYKEDVALMAEMGFSVFRTSIAWSRLFPRGDEQQPNPQGIAFYRSLFEE CKKHGIEPLVTLCHFDVPMHLVMEYGSWRNRKMVDFFSHYARTCFEAFDGLVKYWLTFNE INIMLHSPYSGAGLVFEEGENQEQVKYQAAHHELVASALATKIAHEINPQNQVGCMLAGG NFYPYSCKPEDVWMALEKDRENLFFIDVQARGAYPVWAARVFREKGVTIAKQPGDDEILK NTVDFVSFSYYASRCASAEMNASNTNAANIVKSLKNPHIPASEWGWGIDPLGLRITMNMM YDRYQKPLFLVENGLGARDEIDANGDINDDYRISYLREHIRAMRDAIGDGIPVLGYTSWG CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLARKRKKSFFWYQKVIASNGADLD >gi|289775900|gb|GG745510.1| GENE 122 126907 - 127215 268 102 aa, chain + ## HITS:1 COG:no KEGG:KP1_4319 NR:ns ## KEGG: KP1_4319 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 102 41 142 142 184 94.0 1e-45 MSAQHTTAARGIARAIRQLTVGYVRKRHEDRKTRETRRYTRHAALNLNGDWLEQAGFPVG TQVRVSVSPGKLVIENLEQAPPGTGLPAGQSCAGGEPGSPLG >gi|289775900|gb|GG745510.1| GENE 123 127212 - 127649 621 145 aa, chain - ## HITS:1 COG:STM2845 KEGG:ns NR:ns ## COG: STM2845 COG0680 # Protein_GI_number: 16766151 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 144 12 155 156 247 86.0 6e-66 MMGDDGAGPLLAEMCAANPAGQWVVIDGGSAPENDIVAIRELRPERLLIVDATDMGLNPG DIRVIDPDDIAEMFMMTTHNMPLNYLVDQLKEDVGEVIFLGIQPDIVGFYYPMTQPVKEA VARVYQQLADWQGQGGFARLEAEDD >gi|289775900|gb|GG745510.1| GENE 124 127675 - 128085 508 136 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1011 NR:ns ## KEGG: Kvar_1011 # Name: not_defined # Def: formate hydrogenlyase maturation HycH # Organism: K.variicola # Pathway: not_defined # 1 136 1 136 136 259 100.0 2e-68 MSETVVFSQLSRKFIDENDATPDQAQQVVYYSLAIGHHLGVIDCLEAALSCPWDAYLAWI ATLEAGSAARRKMEGVPKYGEIVIDSSHVAMLANAFDKAQSAQTPQQQAWSKTMLSMLHD IHQESAIYLMVRRLRD >gi|289775900|gb|GG745510.1| GENE 125 128082 - 128849 1083 255 aa, chain - ## HITS:1 COG:hycG KEGG:ns NR:ns ## COG: hycG COG3260 # Protein_GI_number: 16130626 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli K12 # 1 255 1 255 255 494 92.0 1e-140 MSTLLGPRDENGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARLPGELDEQPT ELLHADMVQPLRVRIDREARRLAGYRYGRQIADDYMRLLGQGDSQVLRWLEAEKDPRLTE IVTHLNQVVEGARIR >gi|289775900|gb|GG745510.1| GENE 126 128849 - 129391 674 180 aa, chain - ## HITS:1 COG:STM2848 KEGG:ns NR:ns ## COG: STM2848 COG1143 # Protein_GI_number: 16766154 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 319 90.0 2e-87 MFTFIKKVIKTGTATHAYPLEPMPVDKNFRGKPEHTPQQCIGCAACVNACPSNALTVETD LTTNQLAWQFNLGRCIFCGRCEEVCPTAAIKLSPEYELAVWKKEDFLQQSRFAICHCREC QRPFAVQKEIDYAIALLKHNGDTRAELHRESFETCPECKRQKCLVPSDRIELTRHMREAS >gi|289775900|gb|GG745510.1| GENE 127 129401 - 131110 2745 569 aa, chain - ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 412 412 860 98.0 0 MSEEKIGQHYLAALHQAFPGVVLDEAWQTKDQLTITVKVNYLPEVVEFLYYQQGGWLSVL FGNDERKLNGHYAVYYVLSMEQGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRD MYGLVPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGSKKNN VVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV CGICGFAHSTAYTTSVENAMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSG FMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKEDMIQTRQLAQQMRRDVQELV DMLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVH SEQGCDVISRLKVRINEVYTALNMIDFGLDNLPGGPLMVEGFTYIPHRFALGFSEAPRGD DIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTV VDVRKKKSKVVPYKELERYSIERKNSPLK >gi|289775900|gb|GG745510.1| GENE 128 131127 - 132050 1461 307 aa, chain - ## HITS:1 COG:hycD KEGG:ns NR:ns ## COG: hycD COG0650 # Protein_GI_number: 16130629 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli K12 # 1 307 1 307 307 482 88.0 1e-136 MSLLIALLQALVLFAVAPLLSGIVRVARARLHNRRGPGVLQEYRDILKLLGRQSVGPDAS GWVFRLTPYVMVGVMLTIATALPVVTVDSPLPVLGDLITLIYLFAIARFFFAISGLDTGS PFTALGSSREAMLGVLVEPILLLGLWVAAQVAGSTHISTITDTLYHWPAAHSIPLILALC ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGILKWGISLKQLVVLQMFVGVFF PWGQMTSFSVGGLLLALVVAVVKLVVGVLIIALFENSMARLRFCATSRVTWAGFGFAFLA FVSLLVA >gi|289775900|gb|GG745510.1| GENE 129 132053 - 133144 1779 363 aa, chain - ## HITS:1 COG:ZhycC KEGG:ns NR:ns ## COG: ZhycC COG0651 # Protein_GI_number: 15803240 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 EDL933 # 12 363 256 608 608 498 78.0 1e-140 MLTVSLAGGVPPLWWGVMLLALGMITAFIGGLYALMEHNIQRLLAYHTLENIGIILLGLG AFVTGVATRNSTLMVLGFIGGMYHLINHSLFKTTLFLGAGAVWFRTGHRDIEKLGGIGKK MPLISLAMLVGLMAMAALPPLNGFAGEWVIYQSFFKMSTGDLFIGRLLGPLLAVGLAITG ALAVMCMAKVYGVTFLGAPRTKEAENATCAPWLMTLSVVLAAVFCLVGGIAAPWLLPLVS GAFPVQAQVSSVVSQPMIALLLIACPLLPFLLMIFFKGDRLAARSRGAAWVCGYDHEQSM VVTAHGFAMPVKEAFAPLLKLRHWINPVRLVPGWQSASAPALLRGIALVELAVLVVIVIS RGA >gi|289775900|gb|GG745510.1| GENE 130 134073 - 134741 1015 222 aa, chain - ## HITS:1 COG:hycC KEGG:ns NR:ns ## COG: hycC COG0651 # Protein_GI_number: 16130630 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli K12 # 1 220 1 219 608 197 53.0 2e-50 MSVIGLVNQAVMWYAASAVLAFVFAMRKPLSGAIAGIGGAVASAMLVVAGGAALLMPERI HGGMLQFLHLTMRVGGVNALWLLAIGLSALPVSLFNISWHRHPQVKANGLLVNLLLAAAT CAVVVTNIGSLVVMAEIMALCAAFLTGCAASGKLWFALGRLGTLLMAWTCWLVWSTYGTL ELAQINLQAVDMMQNPLLWLPGLVGFALLAGAIPLHGWAPPS >gi|289775900|gb|GG745510.1| GENE 131 134738 - 135346 635 202 aa, chain - ## HITS:1 COG:hycB KEGG:ns NR:ns ## COG: hycB COG1142 # Protein_GI_number: 16130631 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 200 1 201 203 312 87.0 3e-85 MNRFVIADSTVCIGCRTCEAACSETHRQHGLQAMPRLQVMRNEKESAPQMCHHCEDAPCA TVCPVNAIQRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTRLAPPAP PAPARVSSLLDWVPGVRAIAVKCDLCDFDDQGPACVRTCPTNALLLVDSRDIAQASKRKR QLTFNTDLGDLSLFQAQQGERE >gi|289775900|gb|GG745510.1| GENE 132 135429 - 135878 677 149 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1004 NR:ns ## KEGG: Kvar_1004 # Name: not_defined # Def: formate hydrogenlyase regulatory protein HycA # Organism: K.variicola # Pathway: not_defined # 1 149 1 149 149 296 100.0 2e-79 MTIWEISEKADYIADRHRQQQEQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFG HFQVFVALAEGFNSHTIEYYVENKGGGDKYLIAQATLAADGTVDGRISNRSRDQVLEHYL AIIATVYDRLYDAMEQDQPVDLSHLALTH >gi|289775900|gb|GG745510.1| GENE 133 136088 - 136432 314 114 aa, chain + ## HITS:1 COG:STM2854 KEGG:ns NR:ns ## COG: STM2854 COG0375 # Protein_GI_number: 16766160 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Salmonella typhimurium LT2 # 1 114 1 114 118 154 71.0 4e-38 MHEITLSQRTLEIIEQQAQQAGARRVTGVWLKVGAFSCVEASALTFCFELVCRGTLAEGC ELHIAEQQAECWCERCQQYVHLVSQHVRRCPLCNNDQLQIVADDGLQIQRLELE >gi|289775900|gb|GG745510.1| GENE 134 136436 - 137308 991 290 aa, chain + ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 1 290 1 290 290 537 89.0 1e-153 MCTTCGCGEGNLYIEGDERNPHSAFRSAPFAPAPRQTMTITGVKTDHFAPTRTPEGDLHY GHGEAGTHAPGQSQRRMLEVEIDVLDKNNRLAARNRARFAAKQQLVLNLVSSPGSGKTTL LTETLTRLKGRADCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL PLADHGILFIENVGNLVCPASFDLGERHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKV DLLPYLNFDVEKCLACAREVNPHIEIILLSATSGEGMEQWLTWLETQRCA >gi|289775900|gb|GG745510.1| GENE 135 137299 - 137571 388 90 aa, chain + ## HITS:1 COG:STM2856 KEGG:ns NR:ns ## COG: STM2856 COG0298 # Protein_GI_number: 16766162 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 155 90.0 1e-38 MCIGIPGQICAIDGVLAKVEVCGIQRDVDLTLVGAVDEQGQPRLGQWVLVHVGFAMSVIN EAEARDTLEALQNMFDVEPDVGALLYGEER >gi|289775900|gb|GG745510.1| GENE 136 137571 - 138692 1256 373 aa, chain + ## HITS:1 COG:hypD KEGG:ns NR:ns ## COG: hypD COG0409 # Protein_GI_number: 16130636 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 373 1 373 373 671 84.0 0 MRYVDEYRAPEQVMQLVAHLQQRARLLPHTAARPLRIMEVCGGHTHAIFKFGLDQLLPEN IEFIHGPGCPVCVLPMGRIDACIEIASRPGVIFCTFGDAMRVPGKNGSLLQAKSRGADVR IVYSPMDALRLAQQNPQREVVFFGLGFETTMPATALTLRQARERNVDNFYFFCQHITLLP TLRSLLDQPDNSIDAFLAPGHVSMVIGTEAYGFIASDYHRPLVVAGFEPLDLLQGAVMLV EQTIAQRSDVENQYRRVVPDAGNPLAQSAMADVFRLDGDSEWRGLGVISDSGVQLTPAYQ RFDAEAHFRPAPQRVCDDPRARCGEVLTGRCKPHQCPLFARTCNPQSAFGALMVSSEGAC AAWYQYRSQENEA >gi|289775900|gb|GG745510.1| GENE 137 138689 - 139699 1277 336 aa, chain + ## HITS:1 COG:hypE KEGG:ns NR:ns ## COG: hypE COG0309 # Protein_GI_number: 16130637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 15 336 1 322 322 521 85.0 1e-148 MKSVQLAHGSGGQAMQQLIGDLFMQAFANPWLAEQEDQARLDLAALAAQGDRLAFSTDSY VIDPLFFPGGNIGKLAVCGTANDVAVSGAIPRYLSCGFILEEGLEMATLEAVVASMADTA RAAGIAIVTGDTKVVPRGAADKLFINTAGIGAIPADVRWGTQQISAGDVLLVSGTLGDHG ATILNLREQMGLDGALSSDCAVLTPLIQTLRPLSGVKALRDATRGGVNAVAHEFAAASGC GIELQEATLPVNDTVRGVCELLGLDALNFANEGKLVLAVAREAAENVLAHLRSHPLGRDA AIIGEVVDRPGVRSVGLYGVKRTLDLPHAEPLPRIC >gi|289775900|gb|GG745510.1| GENE 138 139899 - 141956 2598 685 aa, chain + ## HITS:1 COG:STM2859 KEGG:ns NR:ns ## COG: STM2859 COG3604 # Protein_GI_number: 16766165 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Salmonella typhimurium LT2 # 1 684 6 691 692 1148 85.0 0 MSDLGQQGLFDITRLLLQQPDLAALSETLTRLVQQSALADEAAIILWNAGNHRAARYACD EAGHPVSYEDETVLAHGPVRRLLSRPDALHCDHETFADTWPQLIRSGLYRPFGYYSLLPL AADGRIFGGCEFLRRDNRPWSEKEFQRLHTFTQIVAVVTEQIQNRVSNNVDYDLLCHERD NFRILVAITNAVLSRLDIDELVSEVAKEIHRYFRIDAISVVLRSDRKGKLNIYSTHYLDA SHPVHDQSEVDEAGTLTERVFKSKEMLLLNLHEHDTLAPYEKMLFEMWGNKIQTLCLLPL MSGNTLLGVLKLAQCDEQVFTTTNLKLLRQIAERVSIAIDNALAYREIQRLKERLVDENL ALTEQLNNVESEFGEIIGRSEAMNNVLKQVEMVAHSDSTVLILGETGTGKELIARAIHNL SGRNGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDM PLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKQMVIDREFRSDLYYRLNVF PIHLPPLRERPDDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLTRMEWPGNVRELENVI ERAVLLTRGNVLQLSLPEREIVEVPRTPAVLPEEGEDEYQLIVRVLKESNGVVAGPKGAA QRLGLKRTTLLSRMKRLGINKDELV >gi|289775900|gb|GG745510.1| GENE 139 142010 - 143410 1831 466 aa, chain - ## HITS:1 COG:lin0583 KEGG:ns NR:ns ## COG: lin0583 COG2723 # Protein_GI_number: 16799658 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 4 462 3 462 464 481 53.0 1e-135 MQQYQFPQGFLWGAAASGPQTEGVTNKRHRSIWDSWFAEQPERFYQQVGPQTVCDTYHQY LQDVALMKQTGFNSFRTSIQWSRLIADLETGAPDPDAVRFYHAYLDEMIANGIEPMINLY HFDMPEALQKQYGGFESAHVAELFARFARTAFSLFGHKVKYWITFNEPIVPVEGGYLYDF HYPCKKDGRLAAQVAFNIMLAHAKAVTAYRELALAGEIGVVLNLTPSYTLTDSDADKKAA GYADLFFNRSFLDPLVKHEFPKALCEILAAHDCLPTTSKDDVALILSAEIDFLGVNYYVP RRVKAREGDYDLDYFTPEYYFENAVNPQGRFNPYRDNNEILPQAIYDIAANIRDNYGNIK WYLAEIGIAMDRQSEGEPGADGVIDDTFRIELMEEHLVQLHRAIADGANCFGVHQWTFID NWSWINAFKRRYGFWRLDLETGERQIKRNALWFAELATSNGFTSDK >gi|289775900|gb|GG745510.1| GENE 140 143461 - 145653 2154 730 aa, chain - ## HITS:1 COG:no KEGG:KPK_1052 NR:ns ## KEGG: KPK_1052 # Name: not_defined # Def: glycosyl hydrolase, family 5 # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 730 1 730 730 1432 99.0 0 MKPMKNLLLMGLLSALGAGGALAAERSHFTHFITRDGATLKDGDKVFRFAGIHAPELHRI EDDARGPCRADPRGWGQYFKWPTAQEQQNWIQAMVQTGAKAQRVYVLSVQQEFDKACGRE THILAPETADGMPRLNEKAMRVYDNMIAEADKQGLRLILPFIDHWWWWGGREQLAAFYHE KAEDFYRTDSKTFKAYLDVIRQVITRTNTVTGRAYYDEKAIMAWETGNELEDTNADFLHQ TAAWIKKWAPHQLVVDGTYKKINSFALTDPNVDIVSNHYYTNADNNHPGQVTQDLRAVGG QKVYLVGEFGLLPADQLNAIMQSIVHSDVNGAQAAGGLIWGFRGHRHDGGFYWHKESTGH YSYHLPGVAKEGEANQEQAVVDLVRTAAAQMAGQQTMAPLPKPDAPLLRETTSPFAINWM GAAVGRSYDVERAASPTGPWTVVGRDISDGVNEWNPETMVLFRDDYRQLQLGHTYYYRVT AKNESGRSAPSNVISVQHSEENQPPVVTLEPALTTTQDQGVELTASWQDDGLPSREVKVG WQHAGEGQVHFCHADRAQTRAWFTTPGTYALTFTADDGLLKSSKTVTVTVGEATGKAPAD FCRYYGEVYGVAEGRLTVMKSDKDALTVGEDGFLGPFANEGDKVSWQVQAPWSGQFLLNV TFNGKWGGKQNSFVVNGGAPQAVAFPQTDEQGQQLRIPVTLNAGTNQIDFGRFAGDWGYM FIKSIEVVAE >gi|289775900|gb|GG745510.1| GENE 141 145666 - 147003 1877 445 aa, chain - ## HITS:1 COG:lamB KEGG:ns NR:ns ## COG: lamB COG4580 # Protein_GI_number: 16131862 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 445 2 446 446 100 27.0 7e-21 MIKLKHSIPLALLSLAGASSLACADPKYDFALHGYIRSGILANSDGNRADSVGLMPDGKW RLGNEEDTKIELIPTVTLTADSGVVAKVQANLTHQSKCTSDWNCQDDDGHDVQFREGFAE LSNLDFAPEMTFWAGKRYSSSNTSSHQFDWEYIQYNGTGGGFDNMDLGFARFDAGVYAFS PTDETKAYPVDKGDQGYPDDYSLNLWLKKIAGTGFDLELIGHHMNRNENHPTSAEKGYGV TGIYNFDGFYGLTGGYSRLALQYGKGLAAGDSLGKNGWGWANLENTQSWRVVLDSVASMG DLEISTFAFWQKDKNYRWWTEDDHGWGRSMWVAGIRPYHQITRNFAMQYELGYEYLDDKN YKGVNGKGKGGLTKVTVAPTLTFDSGFWARPQLRFFVTYAKWDKGVSDALDGNYNWDTNT ITAGGYSRSGSTDTVNFGVQAEVWF >gi|289775900|gb|GG745510.1| GENE 142 147266 - 148537 1377 423 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 3 423 4 428 446 296 36.0 4e-80 MNIQLMNVAVDIIEQRLAPLANVLTRNNHITAMRDSFALAMPFVIVGSLLVPILFPPVSI DGASRFGQVYLLLRPILLPTFQLTIGLVALIVAFGASASLAKQYRLPERLCGLTGCLAFL LFIGFRETAVSNVYLGGMGIFTALISSTYSIEIIRFFYKKGWCIRLPDEVPLMTRNGFQL LIPLLVVMLSISVMNAILLQTTGRIVPELISEAVRPLVLASDTLMAVLISLFICNLLWFI GIHGALIITGIMNPFWMTYLFENQQALAAGSPTLPHIYLQGFWDFYLLIGGIGSTLPLVL MAMRSRSRQLKSVAKIGLLPSLFNINEPILFGFPVIMNPVFLLPFLFVPLINACIAWYLT QLGILDRAVAMLPWSMPSPLGAAWSANGSWKNLCMSLFAMFNAWMLYRPFFKVYERQLAE TER >gi|289775900|gb|GG745510.1| GENE 143 148715 - 149029 430 104 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 92 52.0 1e-19 MKKIMLCCSAGMSTSLLMKKMIAEAEQRGLPVEINAYGVAEFAEQVGHYQVVLLGPQVKY MQQDLQKQADKYGIRVEPINMMDYGMQKGAAVLDFALSLIENKN >gi|289775900|gb|GG745510.1| GENE 144 149039 - 150361 1941 440 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 4 426 6 428 446 456 54.0 1e-128 MSSLYAKLIDVIERQITPMAGAIGQQKYVTSIRDGFITALPFMIVGSFLLVFIFPPFSPD TTWGFARAWLQFSLDHRDALMLPFNFSMGVMTLFIAVGIAASLAKHHHLDSLTAGMLSLM SFLLVAAPLKDGQISTAYFSGQGIFTAILVAIYSTELYAFLKRHNITIRLPPEVPAGVAR SFEILIPVLAIILTLHPLNLFIEAQLGMIIPEAIMSLVKPLVAASDTLPAILLSVLVCQV LWFAGIHGALIVTGIMNPFWMANLSVNQAAMAAGTAIPHIYVQGFWDHYLLIGGVGSTLP LALMLLRSKAVHLRTIGRMGVVPGVFNINEPILFGAPIIMNPLFFLPFVLVPMVNATLAY FALKLDLVSRVVSMTPWTTPAPIGASWAANWSFSPVILCLICMATAMVMYLPFLKAYEKQ LLAQERENAVGQADNAAQTA >gi|289775900|gb|GG745510.1| GENE 145 150385 - 150699 440 104 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 98 17 112 115 105 66.0 2e-23 MELEEQVMGIIINAGQSRSLCYEALHAAKAGDFATADAKMQEAAHYSREAHLVQTQLIEA DEGEGKTKMTLVMVHAQDHLMTSILAKELIAELIAIYRAQPLHA >gi|289775900|gb|GG745510.1| GENE 146 150750 - 151625 275 292 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 4 291 6 314 319 110 30 1e-22 MLHLGIDIGGTKMEAVLLDPAGECVQRLRRPTHKESYDAFMRQLLTLIADIRAVSPQPFT LGIGLPGAIDPQSGRIKNCNCLVLNGHDLRRDIMQQLGQPVWMANDADCFTLSEAVDGAG AGASTVFGVIIGTGCGGGIAVHQQLLSGPNAIAGEWGHNPLPGYTPERDGPPQPCYCGKT NCIESFLSGTGFARRYGEQARAEAIVAAAQNGDPRALAHWRHFIDAFARSLASVINILDP QVIVLGGGLSNVSQIYRDLPAAIVPWIFSDTCRTQIKPARFGDASGVRGAAW >gi|289775900|gb|GG745510.1| GENE 147 152071 - 153033 1290 320 aa, chain + ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 317 2 331 340 135 32.0 9e-32 MPTIDDVSRLANVSRATVSRVLTGTRGVREESREAVLRAVEELNYRPSFAAQNLASQTSS HVGLVISAQDESHGARLLPLLSQALKGLNKSLLVQYVSDPVEQAAVIDDLQRQCVAVVVL GAVAADAPRNVIAFDRFGVAGSNSQGYDFAFATESACRYVIGKGHRNIALLMDSDSDDAS RQMLEGYRNVLQNYSIPFNRQLVLTANDDVEQALLTLINSFSKYSVIIVKRDRYAAEAMR LLREFTIAVPQEVSLLSLEDSPLASLLYPPLTCISWPLEALLDNCIQRIRSLIDDRPTFT AEGRSLAGRLIPRQSVADIS >gi|289775900|gb|GG745510.1| GENE 148 153216 - 154133 1081 305 aa, chain + ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 1 304 1 304 305 494 80.0 1e-139 MQHLTPLKSLLLASALALLAATPATAQEKFRVITTFTVIADMAQNVAGDAAVVSSITKPG AEIHDYQPTPGDIKRAQGAQLILSNGLNLERWFARFYQHLQGVPEVVVSEGIQPMGISAG PYSGKPNPHAWMSADNALIYVDNIRDALVKYDPPHADTYRRNAEAYKEKIRQTMAPLQAR LAQLPADKRWLVTSEGAFSYLARDYGLRELYLWPINADQQGTPQQVRKVIDTMKKERIPT IFSESTISDKPARQVAREAGAHYGGVLYVDSLSVADGPVPTWLDLLRVTTETIVNGIQDG MRKQP >gi|289775900|gb|GG745510.1| GENE 149 154130 - 154951 1011 273 aa, chain + ## HITS:1 COG:STM2862 KEGG:ns NR:ns ## COG: STM2862 COG1121 # Protein_GI_number: 16766168 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Salmonella typhimurium LT2 # 4 271 2 269 273 445 82.0 1e-125 MNATQAGLYVDQLTVTWRNGHTALRDASFSVPRGSIAALVGVNGSGKSTLFKALMGFVRV GHGEIAILGQPVNRALRQNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKPRD RDIVDAALARVGMSEYRHRQIGELSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVQTEA RIISLLRELRDEGCTMLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAENLERAFS GVLRHVALTGGEAQVITDDERPFISRRAAGGPR >gi|289775900|gb|GG745510.1| GENE 150 154948 - 155796 1364 282 aa, chain + ## HITS:1 COG:STM2863 KEGG:ns NR:ns ## COG: STM2863 COG1108 # Protein_GI_number: 16766169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 278 1 278 286 424 87.0 1e-118 MSWLLEPFGYHYMINAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYML GLPFALGAFLSGGLAAGSMLFLQQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPTSVNIQT IILGNILAIAPEDIIQLAAIGFISMAILLLKWKDLMVTFFDENHARSIGLNTRGLKLLFF TLLAACTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVAIGSLTSFFGAWLSY YLDGATGGIIVVAQTLLFLITFIFAPKHGLLASRRRAREAAC >gi|289775900|gb|GG745510.1| GENE 151 155790 - 156644 1141 284 aa, chain + ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 2 274 3 275 282 350 77.0 2e-96 MLNLFLAPFQFPFMVNAIAVSIIVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYI IGIPFAIGAFIAGLLCAVTTGFLDDNSRLKRDTIMGIVFSGMFGAGLVLYVAIQSDVHLD HILFGDMLGISLSDIGQTAAIALVIALIIGLKWRDFLLHAFDPTQAKASGLRGGLLHYGL LCMIALTIVATLQSVGIILSISLLIAPGAIALLLVRRFIHALLLAVAVAIGCSAGGVWLA FYLDSAPAPTIVVLFSALFVVAFVASTIRDSQKQRASATIPGGG >gi|289775900|gb|GG745510.1| GENE 152 156704 - 157045 307 113 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0984 NR:ns ## KEGG: Kvar_0984 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 113 1 113 113 204 100.0 1e-51 MGKRIEREKMTIQRMIALYQRRCPGALADNAHYQALNAYADKRLDKCVFGENKPACKQCP VHCYQPAKREEMKQIMRWAGPRMLWRHPILTIRHLLDDRRPVPALPEKYRPKK >gi|289775900|gb|GG745510.1| GENE 153 157113 - 158000 876 295 aa, chain - ## HITS:1 COG:ECs3032 KEGG:ns NR:ns ## COG: ECs3032 COG0583 # Protein_GI_number: 15832286 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 3 243 24 264 318 109 28.0 8e-24 MPMKFKQIQAFITVAHEGNMTLAAEKMGITQSGLSRLLLSLEADLSATLFERHKHGMALS EYGSAFLPYALTMLNTEQKAREEIALIRGAGKGILRIGCVSSLLTSHFIDKLAAFHQRHP RIHLRIVDRIDSELFKLLLMHDIDIALCGPLPHDEKIVVRGKINWQDRICIVARQYHPLH QAANLSLEEMLDYPWIMPPPLSTPMNILEDIFRAHQLPCPQPVIECASSSAIKAFLCESD LLTSMPAPVYRHEEALGLLRPFELEGSVFIRDFYAYSHFGVLSGAALQLIQHLKQ >gi|289775900|gb|GG745510.1| GENE 154 158187 - 159128 1049 313 aa, chain + ## HITS:1 COG:ECs3252 KEGG:ns NR:ns ## COG: ECs3252 COG0679 # Protein_GI_number: 15832506 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 11 312 7 310 314 122 28.0 1e-27 MTQNNILLISGAILPVIITVIIGYISGKRKDFNWQQAGDINKIVMLYALPLSIFSNMVMT PRHIVMTMGPVAVAIILALILSFVIPLLVARYLFRRDLALSTLQALAIGSPAVPFIGTSV LAFLFGTVSASLITVSSITQNVFQLPLVMILMSVATGDKSQHISFGTRVINAIKQPVVWS PVIALIIVLADIHIPQTISMSLGLLGKASGGLALFAAGIVLYTRSIVITTATIITVIARN ILVPGACYLLLLKMGFSMEQIKEVVLTMAIPVGSIAIIIAMQYKTGEQEMASTMALSIIA SIITMGGFIFLTF >gi|289775900|gb|GG745510.1| GENE 155 159164 - 160873 1640 569 aa, chain + ## HITS:1 COG:SSO3210 KEGG:ns NR:ns ## COG: SSO3210 COG0028 # Protein_GI_number: 15899911 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Sulfolobus solfataricus # 4 517 5 489 543 252 32.0 2e-66 MASITLSAAELLLHRLQALDVAYIFINSGTDYPPVIEAWAKARATGQKVPELVICPHENA AIGMAHGYYLGTGKVQAVMVHTNVGLANAACGVINLANSNIPVLIFGGRTPISEHSHFGC RNTPIGYGQEMRDQAALIRESVKWDFELRLADQIGEHVDRAWAIASSLPKGPVYLSLPRE PLCETFAIDEAALQAGPSQQPVRYAPVREDIARAAEAIACARHPVIFAQRGARTAGGFAR LNSLVREWAIPLVEYWGTEVTLSADNPLLAGADPSAWLADADVILVVDSQAPWMIAEGDC RQDCTVIQMGPDPLFSRYPVRGYRADINLAGETDEVFSLLEEALRPLQAARQQHVAERAA YTQHRIQQQKNQRDALLHASQTGVITKPWLSYCLGHLANQHRGRIVSELTTLPQFAGLIH AESYYQEALAGGLGEALPIALGLQLARQEELIIAAVGDGSYLFANPAVCHHIAEVMKLPV LVVVGNNGGWGAVAGGTKALYPDGYAARAETIPATAFTTSPDFAAIAASSRAAALSVSRA EDLPGVLEEAVSLIRTRRQSVLVDVQLAR >gi|289775900|gb|GG745510.1| GENE 156 160913 - 161206 360 97 aa, chain - ## HITS:1 COG:AGc387 KEGG:ns NR:ns ## COG: AGc387 COG3526 # Protein_GI_number: 15887579 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 97 4 98 101 130 58.0 5e-31 MNSKAAITITYCSQCNWMLRASWMAQELLHTFSTDIASVTLVPGTGGIFTIDIDGQQIWE RKQDGGFPDAAELKRRVRDVCFPEKPLGHVDKGEQKG >gi|289775900|gb|GG745510.1| GENE 157 161181 - 161381 59 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMAAFEFIVVSLSLKGQIVNKVQFKWRTHDYFVANDNTYHYHSQSTNGVRSHPQRKRRS NLQLWK >gi|289775900|gb|GG745510.1| GENE 158 161422 - 163785 3105 787 aa, chain + ## HITS:1 COG:PA4710 KEGG:ns NR:ns ## COG: PA4710 COG1629 # Protein_GI_number: 15599904 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 69 750 58 724 764 202 26.0 3e-51 MYKSTPSAAWCKKRLLVTSLLAAIYQTSAIAADTSAVSGEAVDDTSEQMTVTAPAPVQKA GSEHSISAQELEDKGANDFGSIMRYEPLISATGASGGSGNGKSGFDRGGYTGYNIRGMES NRVGIDVDGIAQPNATGRGYVGRAGLNTFGIGRDYIDPYMYGSVDIQSGATSTETANSAI GGNVSFRPKSADDYLRPGKTSAFGYRSGYDSADRSWHNGVTVAGGDEFLRGILVYSRRDG QETENNSGTVDAYPANWHSDAFLASGIWQPNDEHKLTSTFDYYHKTNHTHYDTWDSSGNS TIGTANQTSQTRRWGLSLKDDWTPMNDYLDSVSTKIYYQHTEAHDWTYMPDSVTRRMQTV NSNYDTDTWGLQTALAKTLGRHDLSAGFNASTSKTQRPFSQSPIPSVYSEIMQPEADSRS YTLGGFVQDKINFDLDSHNFAIIPGVRVVHQSTKPENLSDLAANSSVLTESSVANLYGKN SDTQVLPSLTFQYDLTPRLMTYLQYQRGAQFPNASQLYGSWNLGSSYAGSQQYALIGNTD LKTETSDNLEWGLKGEVTEGITVRTALFYNSYKNFIAYTRYTRANNPGQFTNVPSNIYTI YQAENRDKAYIYGGEISTKFNFGTWFEQVNGLSTTLALGYSEGKSKSSYSGDKYVDLDSV APMKAIVGVAWDDPAKRYGTALTATFVKGKQATTTNRESYSNSGSAITDASSDYMRVPGY GMLDWTAYWQVAKNVRLNGGVYNLTDRKYWDYLSSRNIETGTNQDANDKALAVMPGRTWQ LGVNVDF >gi|289775900|gb|GG745510.1| GENE 159 163857 - 164888 1240 343 aa, chain + ## HITS:1 COG:ECs4379 KEGG:ns NR:ns ## COG: ECs4379 COG3720 # Protein_GI_number: 15833633 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme degradation protein # Organism: Escherichia coli O157:H7 # 9 343 4 342 342 446 65.0 1e-125 MPNAHPDLWQRYQATKAASTAKYARDIAAEMGISEAELTAARLGHDAVRLSDDARTLIAA LERVGETKCICRNEYAVHEQVGQFTHQHLSGHAGLVLNPRALDLRLFLSQWASAFHLNDN GRQSIQFFDHHGDALLKVYATTQTDMAAWDTLIAEHRVAAPAPLALRPLEPVKYADTADG AALENDWRAMTDVHQFFGLLRKYQLSRQQAFRLVSDDLACRVDRHALPSLLETVRQEGNE IMIFVGNRGCVQIFTGALEKLAPMRGWLNIFNTTFTLHLREESLDEVWVTRKPTSDGHVT SVELFAKDGTQIAQLYGQRSEGHPEQAQWRQQVDRLTREGLPA >gi|289775900|gb|GG745510.1| GENE 160 164885 - 165703 951 272 aa, chain + ## HITS:1 COG:YPO0281 KEGG:ns NR:ns ## COG: YPO0281 COG4558 # Protein_GI_number: 16120620 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Yersinia pestis # 2 271 1 278 279 265 54.0 5e-71 MMRWLLLFIAFPLLSHAAVERLVTLGGDVTEIVYALDAEQSLVARDSTSSWPPAAQKLPD VGYLRQLNAEGILALRPQLVLASAQAQPSLVLHKVQASGVKVVNVPGGESLSAIDNKVAV IAEALGKTAAGDALRQQLQQQIAAIPTQPVAKRVLFILSHGGMNTLVAGQHTAADGAIRA AGLQNAMQGFEHYRAMSQEGVAASQADLVVISADGLKGMGGEAGLWKLPGLAQTPAGRHK QLLTIDDMALLGFGPRTPQAIIALRNKAEQLP >gi|289775900|gb|GG745510.1| GENE 161 165703 - 166698 1489 331 aa, chain + ## HITS:1 COG:YPO0280 KEGG:ns NR:ns ## COG: YPO0280 COG0609 # Protein_GI_number: 16120619 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 23 331 25 334 334 318 64.0 9e-87 MRPALARRLLLMTLLLVFLTLFATTLGAMRLPLVNLLPSGDEMLRHIWLSIRLPRVLLAL LVGAALALSGCVMQGLFRNPLADPGLLGISSGAALAVASWLVLPFSATGLIALYMPMLAA FIGSLAVMVVIFILSRAEEGSLSRLLLVGIAINALCGALVGVLSWLSNDAQLRQLSLWGM GSLGQAEWPTLLVVATLIIPAALAVWWMASRLNLLQLGDEEAHYLGVNVQALQRWLLLCS AVLVAAAVAISGVIGFIGLVVPHLMRLWLGPDHRGLIPGSLLAGAILLLLADTLARTVAA PAEMPVGLLTSLLGAPWFLWLVFRRENSRHG >gi|289775900|gb|GG745510.1| GENE 162 166691 - 167470 234 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 232 5 230 245 94 31 7e-18 MVNEYCAQGLSLHLGKRQVIDNVSVALRGGEMTALIGPNGAGKSTLLRLLTGYLTPDSGT RRLAGKPLEAWSPEALSRRRAVMLQRTALQADWTVETVIAMGRAPWGATADPAVLAAVMA VTGCDGLAGRRYPGLSGGEQQRVQLARCLAQLWRDGAPQGWLFLDEPTSALDLYYQQHLL RLLKRLTAGGQLHVCVVLHDLNLAALWADRILLLHQGNLVAQGTPQEVIQQPVIHRWYGA DVRLVQHPDNAAPQVYLAP >gi|289775900|gb|GG745510.1| GENE 163 167750 - 168232 218 160 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 160 1 163 163 203 62.0 1e-52 MAIPGNMWIYDDGGALIKGGCDVADREFSIEFKGFHHNLSIPTDNATGKPTGTRQHSPMI IVKEFDYSSPYLYKAVATGQNLKSAEIKWYKISDAGQEVEYFNMLLEGVRIVSISPTMAS PEDKNNNHLESVELRYEKITWKHCDGNIIFTDAWNERQTA >gi|289775900|gb|GG745510.1| GENE 164 168693 - 169025 137 110 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0972 NR:ns ## KEGG: Kvar_0972 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 110 1 110 110 197 100.0 1e-49 MKSIQDQVLDLFKDEISTRLDKNWKEIPLELDYDLFDAPGDDLHDALNKFEQKFNVDLSS VKWSCYFPWENTPMLTRWFKVKREDVEKTRKPLTIKMFAESAKAGKWLYD >gi|289775900|gb|GG745510.1| GENE 165 169294 - 171855 3878 853 aa, chain + ## HITS:1 COG:STM2909 KEGG:ns NR:ns ## COG: STM2909 COG0249 # Protein_GI_number: 16766215 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Salmonella typhimurium LT2 # 10 853 12 855 855 1537 94.0 0 MSTIDNLDAHTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA SAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTIS DEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY AEDFAESSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL LQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGTDNTLASVLDCTVT PMGSRMLKRWLHMPVRDTAVLVERQQTIGALQERYTELQPVLRQVGDLERILARLALRTA RPRDLARMRHALQQLPLLRELLADVDRQPVQKLREKMGEFSELRELLERAVIDAPPVLVR DGGVIAPGYSEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRG QSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLA DLQTSASALAELDVLVNLAERAETLNYCCPTFSDKPGIRISEGRHPVVEQVLKEPFIANP LQLAPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPIDRIFTRVGAA DDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAG VPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPR QALEWIYRLKSLV >gi|289775900|gb|GG745510.1| GENE 166 171974 - 172126 156 50 aa, chain - ## HITS:1 COG:no KEGG:KPN_03095 NR:ns ## KEGG: KPN_03095 # Name: not_defined # Def: small toxic membrane polypeptide # Organism: K.pneumoniae # Pathway: not_defined # 1 50 18 67 67 82 100.0 6e-15 MLTKYALVAIIVLCITVLGFTLLVHSSLCELSIKERNIEFKAVLAYESKK >gi|289775900|gb|GG745510.1| GENE 167 172465 - 172701 356 78 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0969 NR:ns ## KEGG: Kvar_0969 # Name: not_defined # Def: cytoplasmic protein # Organism: K.variicola # Pathway: not_defined # 1 78 1 78 78 140 100.0 1e-32 MICPRCADEKIEVMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI DEAPQVPHVPPLLPEDKR >gi|289775900|gb|GG745510.1| GENE 168 172712 - 174139 2125 475 aa, chain - ## HITS:1 COG:ECs3592 KEGG:ns NR:ns ## COG: ECs3592 COG0043 # Protein_GI_number: 15832846 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 475 1 475 475 945 97.0 0 MAFDDLRSFLQALDDQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA RVTMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVTPERRANPAWAENTVDGDD INLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPV PMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA TAPLTGFDVPWGSEVILEGVIEGRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTKPI FESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGF ARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLE LDPGSSPAGITDKLIIDATTPVAPDLRGHYSQPVQDLPETKAWAEKLTAMLANRK >gi|289775900|gb|GG745510.1| GENE 169 174139 - 174732 657 197 aa, chain - ## HITS:1 COG:ECs3593 KEGG:ns NR:ns ## COG: ECs3593 COG0163 # Protein_GI_number: 15832847 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 342 87.0 4e-94 MKLIIGMTGATGAPLGVALLQALRDMPEVETHLVMSKWAKTTIELETPWTAREVAALADF SHSPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLV PREMPLSTIHLENMLALSRMGVAMVPPMPAYYNHPETVDDITNHIVTRVLDQFGLDYHKA RRWNGLRTAEQFAQEIE >gi|289775900|gb|GG745510.1| GENE 170 174907 - 175314 533 135 aa, chain + ## HITS:1 COG:STM2920 KEGG:ns NR:ns ## COG: STM2920 COG1846 # Protein_GI_number: 16766226 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 133 1 133 134 186 80.0 1e-47 MELRNEAFHLLRQLFQQHTARWQQALPDLTKPQYAVMRSVAEQPGIEQVVLIEAAVSTKA TLAEMLSRMEARGLVRREHDPADKRRRFVYLTEQGEALLNRSIPQGNEIDDEFLGRLSDG EREQFTRLVRKMMAP >gi|289775900|gb|GG745510.1| GENE 171 175323 - 176210 938 295 aa, chain - ## HITS:1 COG:STM2912 KEGG:ns NR:ns ## COG: STM2912 COG0583 # Protein_GI_number: 16766218 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 293 8 300 310 394 68.0 1e-109 MLNLQRVTMFIAVVDAGSFTLAAAALGQTKAVVSFNVRQLENELGVTLLLRSTRRLRLTD AGTLFYQRGVALLKAAENLQDEVRASHTGLSGELRITTTPEYGAQVIIPALSAFARRHPA LRVRHVSSSHHADLISERFDVAIRLGTLADSRYRATRIASFAILPVASPAWLASHPVQTL SDLAQADWIIHERLSAPLRWQLRTDQQTEVDFAIASAPRFSADSATALMSFALAGCGIAL LPAWLVAEKVAQRELVPLLSEYHFPQQGVYALYPDAQHMPTRVRAFIDFLREKVG >gi|289775900|gb|GG745510.1| GENE 172 176319 - 177521 1357 400 aa, chain + ## HITS:1 COG:STM2911 KEGG:ns NR:ns ## COG: STM2911 COG0477 # Protein_GI_number: 16766217 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 387 1 391 402 422 64.0 1e-118 MTYRHRVATVFLFGFFLDLINMFIASIAFPAISRALTVSVSQLAWVSNAYILGLTVVVPF SAWLSQRWGAKRLFLLSLGLFSLAALAAGLASSLGELIFWRTLQGMGGGLLIPLGQALTW PLFQPHERAKLSAAVMLVGLLAPACSPAIGGLLVEAFSWRWVFFASLPVALLTFVLAVRW LNDSPGPVRPTRFLPLSLLADPLLRFAMLIYLCVPGMFIGVNVVGMFYLQRVTGMAPGAI GALMVPWSLASFAAITFTGRYFNRFGPRPLVVIGCLLQAAGILLLLKIDTHSPLALLILA FTLMGGGGSLCSSTAQSSAFLHTPAEEMPDASALWNLNRQLSFFAGSALLALLLRVFPPV YAWQGVFISAAAITLLPLLFCLRLNNRAIIHRLHTTLEKS >gi|289775900|gb|GG745510.1| GENE 173 177518 - 177895 338 125 aa, chain + ## HITS:1 COG:STM2910 KEGG:ns NR:ns ## COG: STM2910 COG4460 # Protein_GI_number: 16766216 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 122 1 122 126 141 54.0 3e-34 MNPYLQEVLDAHVLIERWLSQGEGSAEALMTRFAAEFIMIPPGGEKMDYPAVSRFFHHAG ATRPGLHIVVDQAKIISEWHDGAAVRYRESQTLADGSENVRWSTAIFQQAEGKMIWRHLQ ETRLG >gi|289775900|gb|GG745510.1| GENE 174 177948 - 178940 1306 330 aa, chain - ## HITS:1 COG:ECs3595 KEGG:ns NR:ns ## COG: ECs3595 COG0568 # Protein_GI_number: 15832849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 569 98.0 1e-162 MSQNTLKVHDLNEDAEFDENGIEVFDEKALVEEEPSDSDLAEEELLSQGATQRVLDATQL YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE RVRQIQVEGLRRLREILQGQGLNIEALFRE >gi|289775900|gb|GG745510.1| GENE 175 179098 - 180234 605 378 aa, chain - ## HITS:1 COG:STM2925 KEGG:ns NR:ns ## COG: STM2925 COG0739 # Protein_GI_number: 16766231 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 1 378 1 377 377 463 77.0 1e-130 MSAGSTKFTVSRIAALSLVSLWLAGCTNTNNPPAPVSSAGGAASSSTNSGMLITPPSSGV KSAPQAQPIQPVQTQTIQPQPTPMAQEPVQTVNGKIVYNRKYGDIPKGSYTGGSTYTVKR GDTLFYIAWVTGNDFRDLAQRNNVPAPYALNVGQVLQVGNASGQPITGENAVSQASARAS GGATATTTSAQKSTAVVASQPTITYSESSGEQSATKMLPNNKPATTTTTVVAPVTAPTTV STTQPTASSTSTSSPISSWRWPTDGKVIENFSGAEGGNKGIDIAGSKGQAIVATADGRVV YAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHF EIRYKGKSVNPLQYLPQR >gi|289775900|gb|GG745510.1| GENE 176 180360 - 180986 715 208 aa, chain - ## HITS:1 COG:STM2926 KEGG:ns NR:ns ## COG: STM2926 COG2518 # Protein_GI_number: 16766232 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 363 88.0 1e-100 MVSKRVESLLNQLRTQGIVDERVLEAIARVPREKFVDEAFEHKAWENTALPIGQGQTISQ PYMVARMTELLTLTPESRVLEIGTGSGYQTAILAHLVHHVCSVERIKSLQWQARRRLKQL DLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALLAQLDDEGVLVLPVGEEHQFLK RIRRRGNEFIIDTVEAVRFVPLVKGELA >gi|289775900|gb|GG745510.1| GENE 177 180980 - 181741 749 253 aa, chain - ## HITS:1 COG:ECs3598 KEGG:ns NR:ns ## COG: ECs3598 COG0496 # Protein_GI_number: 15832852 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 470 92.0 1e-132 MRILLSNDDGIHAPGIQTLAKALREFAEVQVVAPDRNRSGASNSLTLESSLRTFTFENGD IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLNGYQHYDTAAAVTCTILRALSREPLRTGRILNINVPDLPLDQIKGIRVTRCGNRH PADQVIPQKDPRGNTLYWIGPPGDKRDAGPGTDFAAVDEGYVSVTPLHVDLTAHQAHEVV SDWLERVGVDGQW >gi|289775900|gb|GG745510.1| GENE 178 181722 - 182771 1069 349 aa, chain - ## HITS:1 COG:STM2928 KEGG:ns NR:ns ## COG: STM2928 COG0585 # Protein_GI_number: 16766234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 349 1 349 349 605 86.0 1e-173 MIAFDQLTWLHGKPQSSGLLKANPEDFLVVEDLGFAPDGEGEHVLVRILKNGCNTRFVAD ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRK LRLGALKGNQFTVILREISDRQDVETRLQAIAERGVPNYFGAQRFGIGGSNLQGALRWAE SDAPVRDRNKRSFWLSAARSALFNQQVSIRLKKTEFNQVVDGDALQLAGRGSWFVVTPEE LEVSQARVHNRELMITAALPGSGDWGSQRDALAAEQAAIAEETSLQALLVREKVEAARRA MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE >gi|289775900|gb|GG745510.1| GENE 179 182768 - 183247 848 159 aa, chain - ## HITS:1 COG:ECs3600 KEGG:ns NR:ns ## COG: ECs3600 COG0245 # Protein_GI_number: 15832854 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 283 98.0 6e-77 MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLRKAEK >gi|289775900|gb|GG745510.1| GENE 180 183247 - 183957 332 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 235 6 232 234 132 38 3e-29 MAATFPGVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHAVAALLANACVQRVVIAVSP GDRRFSQLPLAQHPQITVVDGGAERADSVLAGLKALPEAQWVLVHDAARPCLHQDDLSRL LALSETSRVGGILAAPVRDTMKRAEPGKTAIAHTVDRNDLWHALTPQFFPRELLVDCLTR ALNEGATITDEASALEYCGFHPQLVAGRADNIKVTRPEDLALAEFYLTRSRHQEKA >gi|289775900|gb|GG745510.1| GENE 181 183977 - 184294 415 105 aa, chain - ## HITS:1 COG:STM2931 KEGG:ns NR:ns ## COG: STM2931 COG2919 # Protein_GI_number: 16766237 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Salmonella typhimurium LT2 # 16 100 16 100 103 150 90.0 6e-37 MGKLTLLLLALLVWLQYSLWFGKNGLHDYTRVNDDVTAQQATNAKLKARNDQLFAEIDDL NGGQEAIEERARNELSMTRPGETFYRLVPDASKRNQASGQQQNNR >gi|289775900|gb|GG745510.1| GENE 182 184435 - 184761 335 108 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0954 NR:ns ## KEGG: Kvar_0954 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 108 1 108 108 163 100.0 2e-39 MRNTQNLSIIRSEPPPAIGDETTWSLSGAAVGFISWLLALGIPFLLYGSNTLFFLLYTWP FFLALMPVAVVVGIALHSLLNGKLLYSASATILTVGLMFALLFLWLLG >gi|289775900|gb|GG745510.1| GENE 183 184812 - 185417 546 201 aa, chain - ## HITS:1 COG:ECs3604 KEGG:ns NR:ns ## COG: ECs3604 COG0529 # Protein_GI_number: 15832858 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 367 92.0 1e-102 MAQHDENVVWHAHPVTQQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHERGVSTY LLDGDNVRHGLCSDLGFSDEDRKENIRRVGEVARLMVDAGLVVLTAFISPHRAERQMVRE RLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPEKAEIHLDGEQ LVTNLVHQLLDLLQQSDIIRS >gi|289775900|gb|GG745510.1| GENE 184 185417 - 186844 1818 475 aa, chain - ## HITS:1 COG:cysN KEGG:ns NR:ns ## COG: cysN COG2895 # Protein_GI_number: 16130658 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Escherichia coli K12 # 1 473 1 473 475 842 88.0 0 MNTTIAQQIANEGGVEAYLHAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY TRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAVNKMDLVEFSEARF NEIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSANMPWYSGPTLLEVLETVEIQRV VESQPLRFPVQYVNRPNLDFRGFSGTVASGTVTVGQRLKVLPSGVESSVARIVTFDGDLQ EAAAGEAITLVLKDEIDISRGDLLVDAQASLPAVQSASIDVVWMAEQPLTPGQSYDIKIA GKKTRARVDAIRYQVDINNLTQREVESLPLNGIGLVELTFDEPLVLDPYQQNPVTGGLIF IDRLTNVTVGAGMVNEPHLQASTSASQYSAFELELNQLIRKHFPHWDARDLLGGQ >gi|289775900|gb|GG745510.1| GENE 185 186854 - 187762 1474 302 aa, chain - ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 608 97.0 1e-174 MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES IRVFPLSNWTELDIWQYIYLENIEIVPLYLAAERPVLERDGMLMMIDDDRIDLQPGEVIE KRMVRFRTLGCWPLTGAVESEAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQG YF >gi|289775900|gb|GG745510.1| GENE 186 187772 - 189187 1666 471 aa, chain - ## HITS:1 COG:YPO3367_2 KEGG:ns NR:ns ## COG: YPO3367_2 COG0007 # Protein_GI_number: 16123517 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Yersinia pestis # 207 471 3 268 268 341 72.0 2e-93 MDYLPLFAELKQRPVLVIGGDEIAERKIKFLLRAQAQVQVVAGTLSPALADLAARQALSW RATEFSDSLVDDVFLVIAATEDEALNQRVFAAANARYRLVNVVDNQALCSFVFPSIVDRS PLLVAISSSGKAPVLSRILREKIEALLPTNLGRLAESASYWRNHLKTRLTTTEARRRFWE RVFTGRFASLMVAGNHAEAEKALQDELDKPERETGEIILVGAGPGDAGLLTLRGLQAIQQ ADVVFHDHLVTPPVLELVRRDAELICVGKRAGEHSVPQHETNQLLVAAAKAGKTVVRLKG GDPFIFGRGAEELQAAAEAGIPFQVVPGVTAAAGATAYAGIPLTHRDYAQSAVFVTGHYK PDSAPFDWSLLAKSQQTLAIYMGTMKAAEISAQLIAHGRDSATPVAVISRGTRDDQQTIT GTLQQLEHLAKDAPMPALLVVGEVVQLHQQLAWFQHTSSAEGFNASVVNLA >gi|289775900|gb|GG745510.1| GENE 187 189425 - 190480 1197 351 aa, chain + ## HITS:1 COG:STM2936 KEGG:ns NR:ns ## COG: STM2936 COG2234 # Protein_GI_number: 16766242 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Salmonella typhimurium LT2 # 1 348 1 348 348 543 76.0 1e-154 MFSALCRRLLPLALGTGFVFAAAPAFSALGDTASSQARHIATVFPGRMTGTPAEMLSAEY LRQQFAQMGYQSDVRSFNTRYIYTDNNQRKNWHNATGSTVIAAHEGQSRQQIIIMAHLDT YAPQSDKDVENNLGGLTLQGIDDNAMGLGVMLELADHLKNIPTRYGIRFIATSGEEEGRL GAQNLLQRMSEAEKKNTLLVINLDNLVVGDKLYFNSGRRTPASVRKLTRDRALAIARSKG IVAATNPGLNPAYPKGTACCNDASVFDSAGIPVLSVEATNWSLGKKDGYQQRQKSRAFPD GTSWHSVQIDNQQYLDHALPGRIERRSREVVKVMLPLVKELAKVEKPSSLK >gi|289775900|gb|GG745510.1| GENE 188 191183 - 191650 300 155 aa, chain + ## HITS:1 COG:no KEGG:Spro_0225 NR:ns ## KEGG: Spro_0225 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 155 344 499 685 134 51.0 1e-30 MLKNAKEDGLTAWVRAKMALRAGDAITAAAWFAQAAASFLPNEAWGFQQSSDDIISEEFV TPVCRIHAEQAILALNRDDYLQAMWLMYQAKENYWPDVAHIAERVLTVNELIAFVDKYVP APSPSDLNMPKNAGRESADARLRNLLARRLMRTGQ >gi|289775900|gb|GG745510.1| GENE 189 192956 - 193459 -280 167 aa, chain + ## HITS:1 COG:no KEGG:Ctu_10250 NR:ns ## KEGG: Ctu_10250 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 4 161 17 174 197 81 40.0 1e-14 MKFAWRSAPVYPRWRGEHGAREPWALAIPGLSPLAWGTLIQRGERRRVGRFIPAGVGNTC EEDRDFPGVPVYPRWRGEHRFTSASVPPCAGLSPLAWGTRQSGPAPAPASRFIPAGVGNT VPSLAATTLSAVYPRWRGEHAIRSRVASSSGGLSPLAWGTLKLNPFP >gi|289775900|gb|GG745510.1| GENE 190 193948 - 194820 306 290 aa, chain - ## HITS:1 COG:STM2938 KEGG:ns NR:ns ## COG: STM2938 COG1518 # Protein_GI_number: 16766244 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Salmonella typhimurium LT2 # 1 290 17 306 306 552 95.0 1e-157 MIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLV WVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREAPPARRSVEQ LRGIEGSRVRQTYALLAKRYGVKWHGRNYDPKDWARGDVVNQCISAATSCLYGISEAAIL AAGYAPAIGFIHSGKPLSFVYDIADIVKFDAVVPKAFEIAARHPAEPDKEVRLACRDIFR STKLTGKLIPLIEEVLSAGEIEPPQPPPDMLPPAIPEPESMGDKGHRGHG >gi|289775900|gb|GG745510.1| GENE 191 194865 - 195431 37 188 aa, chain - ## HITS:1 COG:no KEGG:SC2871 NR:ns ## KEGG: SC2871 # Name: ygcH # Def: putative cytoplasmic protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 186 29 214 216 284 77.0 1e-75 MHQWLWQLFPDGQQRQFLYRREALQGAFRFFVLSPQLPAESEIFEIQSRSFNPELRAGQR LCFSLRANPTICKAGKRHDLLMDAKRQVKEQVEPRDIWAYQQQAALAWLTRQGEQSGFSL AETVVDAYRQQQIRREKSRQTIQFSSVDYTGMLVVNDPALFLQRLASGYGKSRAFGCGMM MIKPGDGE >gi|289775900|gb|GG745510.1| GENE 192 195497 - 196207 256 236 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_4010 NR:ns ## KEGG: ECH74115_4010 # Name: cas5e # Def: CRISPR-associated protein Cas5 # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 236 13 248 248 359 80.0 5e-98 MASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRREEEQRLNAFNQHYSFLLCASSEPR WARDYHTVQMPKEVRKACYFSRREELQDPELLSALISRRDYYTDAWWMVAVAVTPDAPYT LEQLHEALRYPVFPLYLGRKSHPLALPLMPLLLEGHAAEVLRQAYRQYQAKFSLLRLSLR QLQDQCWWEGEHAGLAANKILRRRDCPLNRQQCLFGERTVNQGAWLSKEETCTSQE >gi|289775900|gb|GG745510.1| GENE 193 196254 - 197309 1049 351 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3252 NR:ns ## KEGG: SeD_A3252 # Name: cse4 # Def: crispr-associated protein, CSE4 family # Organism: S.enterica_Dublin # Pathway: not_defined # 1 351 1 352 352 577 85.0 1e-163 MTTFIQLHLLTAYPAANLNRDDTGAPKTVMLGGATRLRISSQSLKRAWRTSELFEQALAG HIGIRSGRIAREAAEILVKSGIEPRKAVDYVKAIGECFGKVKTKADQNDPLKCSETEQLA HISPAEFDAVKALAHRLAEEKRAATKEEAALLRHDRMAVDIAMFGRMLADQPTYNVEAAC QVAHAFGVSETLVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVNN LNGNEELANKTLRAFAEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYQPI NGGDQLDVAVQRITALRENMNTVYGQQTAFQHFDVMNKQGSMNDVLDFICA >gi|289775900|gb|GG745510.1| GENE 194 197328 - 197870 417 180 aa, chain - ## HITS:1 COG:no KEGG:SPC_2986 NR:ns ## KEGG: SPC_2986 # Name: tnpA # Def: transposase # Organism: S.enterica_Paratyphi_C # Pathway: not_defined # 1 180 1 180 182 249 72.0 5e-65 MNVVSDEHKATLRQWHEELQEKRGLRASLRRSATLNDVCLSEGFHSLMVQTHSLWNTQGK EWRFTALALVAALAAQVKTIDDRQTFAAQLGQKTGDTPVMSRLRFARLSAVKTPDELLRQ LRRAISLLHGSVNLLSLAEDIFRWCREQDDLLNHRRRQQRPIEFIRIRWALDYYQAGDAE >gi|289775900|gb|GG745510.1| GENE 195 197867 - 199423 1269 518 aa, chain - ## HITS:1 COG:no KEGG:STM2943 NR:ns ## KEGG: STM2943 # Name: not_defined # Def: cytoplasmic protein # Organism: S.typhimurium # Pathway: not_defined # 1 500 1 500 518 799 78.0 0 MNTFSLLTTAWLPVRYRDGTTGKLAPVGLTDEDVVDIAATRADLQGAAWQFLIGLLQCAV APKNRNGWEDTWEEGLSAETLVAALAPLEAAFQFGPDAPSFMQDFDSLAGDQVSIASLLP EVPGAQTTKFNKDHFIKRGVTNSFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTL IELQEYEGERLTPLWRKLWLNVLPQDAADMPLPVAYDESVFPWLAPTRTSEQTSAITTPE QVDKLQAYWGMPRRIRLDFAATQQGTCDICASESDGLLSQMAVKNYGINYDGWRHPLTPY RLALKGDGGFFSVKPQPGGLIWRDWLGLSQDNQTESNSEYPAQVVKVFNARGPRNIKAGL WGFGADFDNMKIRCWYEHHFPLLTDESTIPDLRKAAQTAARLLSLLRSALKEAWFDDPKG ARGDFSFIDIDFWNQTQPRFLNLIHELENDQPAQERVDKWQRELWLFVRRCFDDRVFTNP YENNDLARCMAARKKYFATSAEKQSAKAARAKKQEAAQ >gi|289775900|gb|GG745510.1| GENE 196 199435 - 201675 1357 746 aa, chain - ## HITS:1 COG:STM2944 KEGG:ns NR:ns ## COG: STM2944 COG1203 # Protein_GI_number: 16766250 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Salmonella typhimurium LT2 # 1 744 142 885 887 1109 71.0 0 MPLTTGHHGRPPVGMRALDNFHPSDIKAAHDFLLAIKSLFPDMEIPAFWDDDEGVELFNQ LSWFISAAVVLADWTGSSTRFFPRVSQRMPLDVYWRQANALAEQAVNVFPPAAAVAPFTG IETLFPFIQHPTPLQKAVLELDISQPEPQLFILEDVTGAGKTEAALILTHRLMSAGKAQG LFFGLPTMATANAMFDRLAQSWLALYQPDARPSLVLAHSARGLMEGFNQSIWPGAVSGSE EPDDEQPFSQGCAAWFADSNKKALLAEVGVGTLDQALMAVMPFKHNNLRLLGLDNKVLLA DEIHAYDAYMSRILESLIEQQARSGNCVILLSATLSQQQRDKLVASFSRGSGCALEAPLL GDDDYPWLTQVAGQEVTSRYVATRQEVERCVNIGWLDNEEACLARIEQSASEGRCIAWIR NSIDDAVRIYRQLLSRGAIPAEKISLFHSRFAFYDRQRIEKETLSHFGKDDSTQRAGRVL IATQVIEQSLDIDMDDMISDLAPIDLLIQRAGRLQRHIRDRHGRLNVGGEDERAPPQLMI LAPEWDEAPQEEWLTSAMRNSAYVYPDHGRLWLTQRVLRQQGAIRMPQSARLLIESVYGE DIAIPDGLVKAEQAQLAKYYCDRAFAHQMLLNFKPGYSPDSSDFLADKLSTRLAEESVTL WLAKSIDGQLLPYACGAHPWEMSMLRVRESWWRKHKAEFTLLAEKSLQQWCVQQHQNPDF AVVIIVTDLPDCGYSASEGLIGTMEV >gi|289775900|gb|GG745510.1| GENE 197 202305 - 203039 1139 244 aa, chain - ## HITS:1 COG:STM2946 KEGG:ns NR:ns ## COG: STM2946 COG0175 # Protein_GI_number: 16766252 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 244 1 244 244 464 94.0 1e-131 MSVLDLNALNALPKVERILALAETNAKLEKLSAEERVAWALENLPGEYALSSSFGIQAAV SLHLVNQLRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAQESAAWQEARYGKL WEQGVEGIEKYNEINKVEPMNRALKELNTQTWFAGLRREQSGSRATLPVLAIQRGVFKVL PIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECG LHEG >gi|289775900|gb|GG745510.1| GENE 198 203138 - 204850 2496 570 aa, chain - ## HITS:1 COG:STM2947 KEGG:ns NR:ns ## COG: STM2947 COG0155 # Protein_GI_number: 16766253 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Salmonella typhimurium LT2 # 1 570 1 570 570 1144 95.0 0 MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ DDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTF QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEH LLPRTRAYAEIWLDQKKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRT DRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTL FIENGRILDYPGRPLKTGLLEIAKIHKGEFRITANQNLIVASVPEDQKARIEKLARDHGL MNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDKVEGVMNKHGVSDEHIVTRVTGCP NGCGRAMLAEVGLVGKAPGRYNLHLGGNRSGTRIPRMYRENITESEILDSLDELVGRWAK EREAGEGFGDFTVRAGIIRPVLDPARDFWE >gi|289775900|gb|GG745510.1| GENE 199 204850 - 206649 2061 599 aa, chain - ## HITS:1 COG:cysJ KEGG:ns NR:ns ## COG: cysJ COG0369 # Protein_GI_number: 16130671 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Escherichia coli K12 # 1 599 1 599 599 1060 89.0 0 MTTQATPSNLLPLNPEQLARLQAATTDFTPTQLAWVSGYFWGVLNQQSGAAVAVPAQAAE VPSITLISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIAAEKLLVVVTSTQG EGEPPEEAVALHKFLFSKKAPKLDGTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGAERL LDRVDADVEYQTAAAEWRARVVEVLKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLSAT LSVNQKITGRDSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPQLVKELVELLWLKGDE PVTVDGKTLPLAEALEWHFELTVNTATIVENYATLTRSESLLPLVGDKAQLQQYAAATPI VDMVRFSPAQLDAEALIGLLRPLTPRLYSIASSQAEVESEVHVTVGVVRYEIEGRARAGG ASSFLADRVEEDGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAQ GKNWLFFGNPHFTEDFLYQVEWQSYVKEGLLTRIDLAWSRDQQQKIYVQDKLREQGAELW RWINDGAHIYVCGDANRMAKDVEHTLLEVIAEYGAMDAEAADEFLSELRVERRYQRDVY >gi|289775900|gb|GG745510.1| GENE 200 206969 - 207331 473 120 aa, chain + ## HITS:1 COG:STM2949 KEGG:ns NR:ns ## COG: STM2949 COG0720 # Protein_GI_number: 16766255 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Salmonella typhimurium LT2 # 1 120 1 120 120 241 94.0 3e-64 MSTTLFKDFTFEAAHHLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFAELKAA FKPTYDRLDHYYLNDIPGLENPTSEVLAKWIWDEMKPRVPLLSAVMVKETCTAGCVYRGE >gi|289775900|gb|GG745510.1| GENE 201 207685 - 208356 218 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 88 29 5e-16 MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLADREVSLFSILAK TKESDKWGPASSEDLLAIIGRQGWTARHVVITGGEPCIHDLTPLTSLLEQNGFSCQIETS GTHEVRCSHNTWVTVSPKVNMRGGYDVLSQALQRADEIKHPVGRVRDIEALDELLETLSD DKPRIIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA >gi|289775900|gb|GG745510.1| GENE 202 208832 - 209941 759 369 aa, chain + ## HITS:1 COG:YPO1559 KEGG:ns NR:ns ## COG: YPO1559 COG0451 # Protein_GI_number: 16121830 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 369 11 379 379 519 65.0 1e-147 MTTLLITGVTGFLGGAALEKILHQETRLDLLLLVRADSPEAGLERVKENMRKFNIAEEKL AMLHPQHILLGDLASPEHFLNDPRLDQVTHVLNCAAVASFGSNPLIWKVNVEGTLRLAQR MAQVEGLQRFLHVGTAMSCSPEPDSLVAESAEFRERAEHLVEYTHSKSTIEQLMQQHCPT LPLVIARPSIVVGHTHHGCRPSSSIFWVFSMGLMLQKFLCSMEDRIDVIPVDYCADALLM LLNQPLAHGEVVHISAGEENSVKFAEIDRAMAQALEQAPVGDKYAQVSYDTLVKMRRELK GIFGPCNERLMLKAMRLYGAFATLNVRFSNDKLLSMGMPKPPRFTDYIDRCVETTRGLSI PQQMAVDFK >gi|289775900|gb|GG745510.1| GENE 203 210005 - 211303 1345 432 aa, chain - ## HITS:1 COG:STM2952 KEGG:ns NR:ns ## COG: STM2952 COG0148 # Protein_GI_number: 16766258 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Salmonella typhimurium LT2 # 1 432 1 432 432 751 97.0 0 MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFL GKGVTKAVAAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAK AAAASKGLPLYAHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAPTLK EAVRMGSEVFHHLAKVLKSKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD ITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEDLTKQYPIVSIEDGLDESDWDG FAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEQA PFNGRKEIKGQA >gi|289775900|gb|GG745510.1| GENE 204 211384 - 213021 1719 545 aa, chain - ## HITS:1 COG:STM2953 KEGG:ns NR:ns ## COG: STM2953 COG0504 # Protein_GI_number: 16766259 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Salmonella typhimurium LT2 # 1 545 1 545 545 1067 96.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEV FVTEDGAETDLDLGHYERFIRTKMTRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERVLAGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYM AAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD VDSIYKIPGLLKSQGLDDYICKRFSLTCPEANLAEWEQVIYEEANPAGEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEG KIATARYARENNIPYLGICLGMQVALIEFARNVAGMENANSTEFVPDCKYPVVALITEWR DEDGNVEVRSEKSDLGGTMRLGAQQCQLDDESLVRQLYGEPTITERHRHRYEVNNMLLKP IEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEYQ KRQAK >gi|289775900|gb|GG745510.1| GENE 205 213302 - 214093 1118 263 aa, chain - ## HITS:1 COG:ECs3641 KEGG:ns NR:ns ## COG: ECs3641 COG1694 # Protein_GI_number: 15832895 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 431 87.0 1e-121 MTQIDRLLGIMKRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIQREDFDDLRGELG DLLFQVVFYAQMAQEEERFNFDDICAAISDKLERRHPHIFADATAGNSSEVLARWEQIKS AERAEKAQHSALDDIPHSLPALMRAHKIQRRCSAVGFDWTSLGPVLDKVHEEIDEVMHEA QQAVVDEAKLEEEVGDLLFATVNLSRHLGVKAEVALQKANRKFERRFREVERIVAARGLE MTGIDLDTMEEVWQEVKRQETDL >gi|289775900|gb|GG745510.1| GENE 206 214536 - 216773 2817 745 aa, chain - ## HITS:1 COG:STM2956 KEGG:ns NR:ns ## COG: STM2956 COG0317 # Protein_GI_number: 16766262 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Salmonella typhimurium LT2 # 1 745 1 744 744 1440 93.0 0 MVAVRSAHLNKAGEFDPKKWIASLGISSQQSCERLAETWDYCREKTQGHPQADLLLWRGV EMVEILSTLSMDLDTLRAALLFPLADGEVVSEEVMQESVGKSVVTLIHGVRDMAAIRQLK ATHNDSVSSEQVDNIRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTN IYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIDEFVGHLRSEM KAEGVKAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY RHLPDEFDDYVANPKPNGYQSIHTVVLGPSGKTVEIQIRTRQMHEDAELGVAAHWKYKEG AGAGTGGGRGYEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLP AGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPN LGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKDAEKHLLPRYNFNEL DELLAAIGGGDIRLNQMVNFLQAQFNKPSAAEQDAAALKQLQQKTYAPQNRTKDNGRVVV EGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCDQLAELQSHAPERIVDAVWGE SYSAGYSLVVRVEANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLATIDMTIEIYNL QVLGRVLGKLNQVPDVIDARRLHGG >gi|289775900|gb|GG745510.1| GENE 207 216895 - 218199 1059 434 aa, chain - ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 431 1 431 433 704 80.0 0 MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFVSGVLPQEQAEVVLVEDKKQ YARAQVKRRLTDSPQRQAPRCPHFGVCGGCQQQHASVALQQQSKRAALARLMKREVDEVI AGVPWGYRRRARLSLNYQPKTQQLQMGFRQANAKAIVDVVQCPVLVPQLEALLPAVRECL SALSALRHLGHVELVQADNGPLMVLRHTAALPAGDREKLERFSQTHGLSLYLAPQSEILE HIHGEAPWYTSDGLRLVFSPRDFIQVNDGVNQQMVRTALEWLDLQPEDRVLDLFCGMGNF TLPLATRAAHVVGVEGVPALVEKGRENAALNGLSNVTFFHENLEEDVTRQAWAKHGFDKV LLDPARAGAPGVMPHIIKLAPRRVVYVSCNPATLARDSETLLQAGYQIQRLAMLDMFPHT GHLESMVLFERRLT >gi|289775900|gb|GG745510.1| GENE 208 218312 - 221062 3439 916 aa, chain + ## HITS:1 COG:STM2958_1 KEGG:ns NR:ns ## COG: STM2958_1 COG0642 # Protein_GI_number: 16766264 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 525 1 525 525 947 91.0 0 MTNYSLRARMMILILAPTVLIGLLLSIFFVAHRYNDLQRQLEDAGASIIEPLAVSSEYGM NLQNRESIGQLISVLHRRHSEIVRAISVYDSHNRLFVTSNYQLNPSELQIPKGEAFPRRL SVIRDGDIMILRTPIVSESYSPDESPESDAKMPGNMLGYVALELDLKSVRLQQYKEIFIS SVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGI NSMAMSLAAYHEEMQHNVDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM SHELRTPLNGVIGFTRLTLKTDLNATQRDHLTTIERSANNLLAIINDVLDFSKLEAGKLI LESIPFLLRTSLDEVVTLLAHSAHDKGLELTLNIKNNVPDNVIGDPLRLQQIVTNLVGNA IKFTEHGNIDVLVEQRAISNSRVQIEIQIHDTGIGIPERDQSRLFQAFRQADASISRRHG GTGLGLVITQRLVKEMGGDISFHSQPNRGSTFWFHISLDLNPNAIPDMLNTDGLTGKRLA YVEANATAAQCTLEMLAATPLEVIYSPTFSSLAEAQYDILLVGIPVSMRDLSPHREKLVK ACAMSDNVLLALPCHAQVSAEALKRDGVAACLLKPLTTTRLLPALVATNHAPASAPLTQT DSHKLPMTVMAVDDNPANLKLIGALLDDLVQQVILCDSGQQAVDQAKRLQMDLILMDIQM PDMDGIRACELIHHLSHHQQTPVIAVTAHALEGQREKLLSAGMNDYLAKPIEEEKLHALL LRYQPGLLSVAPAALPPAEPVIDHNLTLDWQLALRQAAMKPDLAREMLQMLIAFMPEVRN KVEEQLVGEQPEGLVDLIHKLHGSCSYSGVPRLKKLCHTLESQLRSGTAAEDLEPELLEL LDELDNVAREACRMGV >gi|289775900|gb|GG745510.1| GENE 209 221292 - 222431 1372 379 aa, chain - ## HITS:1 COG:STM2959 KEGG:ns NR:ns ## COG: STM2959 COG1929 # Protein_GI_number: 16766265 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Salmonella typhimurium LT2 # 1 378 1 378 380 521 78.0 1e-147 MKIVIAPDSWKESLSALEVATAIEQGFREIYPDAEYVKLPVADGGEGTVEAMVAATGGHQ VPLTVTGPLGEPVEAFYGLSGDRQCAFIEMAAASGLESVPPAQRNPLLTTSWGTGELIRH ALDAGVRQIIIGIGGSATNDGGAGMAQALGAKLLTADGQQIASGGGALETLARIDLSELD PRLADCRIEVACDVTNPLTGPQGASAVFGPQKGATTQMIDRLDSGLLHYARIIARDLDID VLSLEGGGAAGGMGAALYAFCGATLRPGIEIVTDALQLATRVADADLVITGEGRIDSQTI HGKVPVGVAKVAKRFNVPVIGIAGSLTADVGVVHQHGLDAVFSVLYTICTLDEALANAAA NLRMTARNVAAVLQMGDKR >gi|289775900|gb|GG745510.1| GENE 210 222504 - 223844 1913 446 aa, chain - ## HITS:1 COG:STM2960 KEGG:ns NR:ns ## COG: STM2960 COG4948 # Protein_GI_number: 16766266 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Salmonella typhimurium LT2 # 1 446 1 446 446 860 92.0 0 MTTFTSTPVVTTMQVIPVAGHDSMLMNLSGAHAPYFTRNIVIIKDNAGHTGVGEIPGGEK IRQTLEDAAPLVVGKTLGEYKNVLGAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAL LDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRHATPLAYQSQPDEQCEWYRLRHE EAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGFEEAEAISALAKRFPNARVTLDPNGAW LLEEAIQIGKQLKGVLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH TLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDVSLAMFTHVAAAAPG KITAIDTHWIWQEGNQRLTKQPFEIKGGMVQVPSTPGLGVELDMDRVMQANELYKKHGLG ARDDAMAMQYLIPGWTFDNKRPCMVR >gi|289775900|gb|GG745510.1| GENE 211 223862 - 225202 1799 446 aa, chain - ## HITS:1 COG:STM2961 KEGG:ns NR:ns ## COG: STM2961 COG4948 # Protein_GI_number: 16766267 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Salmonella typhimurium LT2 # 1 446 1 446 446 844 93.0 0 MTTQSSPIITEMKVIPVAGHDSMLLNIGGAHNAWFTRNIVVLTDNAGHTGVGEAPGGEVI YQTLLAAIPQVVGQEVARLNRVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALL DLLGQVLKVPVCELLGPGKQRDAVTVLGYLFYIGDRQKTDLGYLDHTPGDHEWYRLRHQQ ALSSEAVVRLAEAAQDRYGFKDFKLKGGVLPGEQEIDTARALKKRFPEARITVDPNGAWL LDEAIALCKGLQDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHA VMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGN PTAIDTHWIWQEGDARLTKNPLQIIHGKIAVPDAPGLGVELDWEQVRKAHEAYKALPGGA RNDAGPMQYLIPGWTFDRKRPVFGRH >gi|289775900|gb|GG745510.1| GENE 212 225199 - 226557 1998 452 aa, chain - ## HITS:1 COG:ECs3649 KEGG:ns NR:ns ## COG: ECs3649 COG0477 # Protein_GI_number: 15832903 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 784 93.0 0 MSSLSQAATAAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIIALFTL RFLVGLAESPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HVFFFMGGLGIVISFVWLKVIHDPNNHPGVNQKELDYIAEGGALINMDQKSSAQKVPFSV KMGQIRQLIGSRMMIGIYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC GFVGGVLGGVISDWLMRRTGSLNIARKTPIVLGMLLSMTMLMCNYVNVEWMVIGFMAMAF FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY VGIHALVAVLSYLVLVGDIKRIELKPVVGRSS >gi|289775900|gb|GG745510.1| GENE 213 227029 - 227472 946 147 aa, chain - ## HITS:1 COG:ECs3650 KEGG:ns NR:ns ## COG: ECs3650 COG0716 # Protein_GI_number: 15832904 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 146 1 148 149 230 76.0 8e-61 MAEVGIFVGTMYGNSLLVAEEAEAILSGLGHKATVYEDPQVNDWESYTGKYVLVVTSTTG QGDLPDSIVPLYEGMKDMYQPHLRYGIIALGDSTYANFCGGGLKFDQLLQEQGAKRIGEM LKIDASEDPEPESVSNPWVEQWATLLE >gi|289775900|gb|GG745510.1| GENE 214 227477 - 228280 202 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 1 222 77 276 287 82 28 4e-14 AGLMLEIIYQDDWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPT SGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMDEALLDYPLVEELDKIADKFAR EDKDPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPILG DSKHGDLRQNRSAAEHFGCHRLMLHASELSLTHPFTGEPLTLRAGFDEVWMRALSQFGWR GLLPLNERVEFADDCGQDEGNKVNPGR >gi|289775900|gb|GG745510.1| GENE 215 228271 - 228600 490 109 aa, chain - ## HITS:1 COG:STM2965 KEGG:ns NR:ns ## COG: STM2965 COG3098 # Protein_GI_number: 16766271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 122 61.0 1e-28 MTLHDSVRDRLRAIEALLRETEHWQATAPDSSAFASDKPFCLDTLEPLEWLQWVLIPRMH QLLESGQPLPQNFAVAPYYEMALDQAHPVRESMLAELLLLDALFAGEQA >gi|289775900|gb|GG745510.1| GENE 216 229233 - 229778 639 181 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0919 NR:ns ## KEGG: Kvar_0919 # Name: not_defined # Def: Syd family protein # Organism: K.variicola # Pathway: not_defined # 1 181 1 181 181 347 99.0 2e-94 MDHQTAEALRAFTQRYCAAWQQQRNSLPRSEELYGVPSPCVVDTQGEAVFWQPQPFSLAQ NISAVERALDIVVQQPLHSYYTTQFAGDMTGRFADETLTLLQTWSEEDFQRVQENLIGHL VVQKRLKLAPTLFIATLESERDVISVCNLSGEVIKETLGTAKRITLSPSLASFLSHLEPV L >gi|289775900|gb|GG745510.1| GENE 217 229847 - 230692 1056 281 aa, chain + ## HITS:1 COG:STM2968_2 KEGG:ns NR:ns ## COG: STM2968_2 COG0780 # Protein_GI_number: 16766273 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Salmonella typhimurium LT2 # 138 281 1 145 145 278 89.0 8e-75 MSSYDNHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLHADNLPFHGADIWTLY ELSWLNGKGLPQVAVGHVELPDTSVNLVESKSFKLYLNSFNQTRFASWQDVAETLTRDLS ACAQGEVKVALYRLDELEGQPIAHLHGACIDDQDIEIDNYQFSTDYLQGAASGKIVEETL VSHLLKSNCLITHQPDWGSVQIQYRGAKIDREQLLRYLVSFRHHNEFHEQCVERIFNDIL RFCQPESLSVYARYTRRGGLDINPWRSNGDFSPATGRLARQ >gi|289775900|gb|GG745510.1| GENE 218 230834 - 232171 1776 445 aa, chain + ## HITS:1 COG:ECs3655 KEGG:ns NR:ns ## COG: ECs3655 COG1611 # Protein_GI_number: 15832909 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Escherichia coli O157:H7 # 1 443 11 452 454 852 93.0 0 MDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINVLRRER GVKLELINPPEEAFVDGRIIRSLQANLFAVLRDILFVYGQIHNTVRFPNLDLESSVHITN LVFSILRNARALHVGEAPNMIVCWGGHSINENEYLYARRVGTQLGLRELNICTGCGPGAM EAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAH GIIIFPGGVGTAEELLYLLGILMHPENKAQVLPLILTGPKESADYFRVLDEFITHTLGES ARRHYRIIIDDPAEVARQMKKAMPLVKESRRETDDAYSFNWSIRISPDLQMPFDPTHENM ANLKLSPDQPVEVLAADLRRAFSGIVAGNVKEVGIQAIEQYGPYKLHGDPEMMRRMDDLL QGFVAQHRMKLPGGTAYIPCYEIIA >gi|289775900|gb|GG745510.1| GENE 219 232681 - 233970 1869 429 aa, chain + ## HITS:1 COG:STM2970 KEGG:ns NR:ns ## COG: STM2970 COG0814 # Protein_GI_number: 16766275 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 429 1 429 429 694 93.0 0 METTQTSTIVSGETRSGWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILA FPMTFFAHRGMTRFVLSGKNPGEDITEVVEEHFGVGAGKLITLLYFFAIYPILLVYSVAI TNTVETFMAHQLHMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVIALMILA LYLIPQWNGAALETLSLSSASATGNGLLMTLWLAIPVMVFSFNHSPIISSFAVAKREEYG AGAEKKCSSILARAHIMMVLTVMFFVFSCVLSLSPADLAAAKEQNISILSYLANHFNAPV IAWMAPIIAMIAITKSFLGHYLGAREGFNGMVIKSLRSKGKSIEVNKLNKLTALFMLVTT WIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVIMGLIAI SAIFYSLFS >gi|289775900|gb|GG745510.1| GENE 220 234036 - 235403 1780 455 aa, chain + ## HITS:1 COG:ECs3657 KEGG:ns NR:ns ## COG: ECs3657 COG1760 # Protein_GI_number: 15832911 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli O157:H7 # 1 455 1 455 455 853 92.0 0 MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARGLLADVSKVVVDVYGSLSLTGKGH HTDIAIIMGLAGNLPDTVDIDAIPGFIQDVNTHGRLMLANGQHEVDFPVDQCMNFHADNL SLHENGMRITALAGDKVIYSQTYYSIGGGFIVDEAHFGQIADAPVAVPYPYKNAADLQRH CRETGLSLSGLMMQNELALHSKEALEQHFAAVWEVMSAGIERGITTEGVLPGKLRVPRRA AALRRMLVSQDTTNSDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DKFIRKVNSNSLARYMLVASSIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGG SPGQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVC LDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD >gi|289775900|gb|GG745510.1| GENE 221 235542 - 236483 1500 313 aa, chain + ## HITS:1 COG:PA3445 KEGG:ns NR:ns ## COG: PA3445 COG0715 # Protein_GI_number: 15598641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 23 309 27 313 323 284 49.0 1e-76 MSNRFRPAWLLVLAALSTSALAKAPETVNIGYQKANIFALLKYRGTLDESLKKQGIAVRW VEFPAGPQMLEGLNVGSIDLAATGDAPPAFAQAAQADLVYLAHSPANPKTEAIVVPEQSA IHSVADLKGKRVGLNKGSDVNYLLVAALEKAGLSYKDITPVYLPPADARAAFQRGAIDAW VIWDPFLAEVETNAKARQIRNAEGLVPHYTFYLASRKFADTYPETAKQVVDELGKLSAWA NSHQDEAAGLLSTSTGLDKAIWLKTLARLPYGAERMTPAVYNEQQALADTFTRIGLLPVK VDVRSATWSLDKP >gi|289775900|gb|GG745510.1| GENE 222 236529 - 237752 1532 407 aa, chain - ## HITS:1 COG:PA2324 KEGG:ns NR:ns ## COG: PA2324 COG1960 # Protein_GI_number: 15597520 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 2 406 12 417 419 429 58.0 1e-120 MTLLSTGTDYDALAAAFRPIFTRIAQGAAEREQQRILPDEPIRWLKEAGFGTLRIPREKG GWGASLPQLSALLIELAQADSNLPQALRAHFAFVEDQLNQPDSAGRDRWFRRFLDGELVG SGWTEIGAVKLGEVNTRVTPTEGGWRLDGEKFYSTGALYADWIDVFARRSDTAGDVIALV STQQTGVAREDDWDGFGQRLTGSGTTRFTGARVETEHVYDFAQRFRYQTAFYQHVLLATL AGIGLAVERDAAQGVKHRSRMYSHGNAAVPRDDAQVLQVVGQISSWAWATRAAVLQAAES LQQAYVAHVSDDEALIARRNQLAEVEAAQAQVIASDWIPRAATELFNALGASDTRTRLAL DRHWRNARTVASHNPVIYKARNIGNWLVNGEAPTFIWQIGNGEKTAG >gi|289775900|gb|GG745510.1| GENE 223 237763 - 239184 1840 473 aa, chain - ## HITS:1 COG:Ta1391 KEGG:ns NR:ns ## COG: Ta1391 COG0477 # Protein_GI_number: 16082368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 39 451 32 433 459 139 26.0 9e-33 MSTLPVDNPGIASVPVSSVGDVARLINSGKEQAKYARMIVFLALGGVFLDAYDLTTLSYG IDDVVREFQLSPLLTGLVTSSIMVGTIVGNIIGGWLTDKYGRYSVFMADMFFFVISAIAA GLAPNVWVLIGARFLMGIGVGIDLPVAMSYLAEFSRFAGKGNKAARLAAWCPMWYAASTV CFLIIFGLYFLLPQEHLDWLWRASLLFGAVPALLIIAVRSRFMNESPLWAANQGDLTSAV RILRDSWGIHAHEVPAAKPAPAPKVSFRVLFEKPYRERTIVAGVMNICISFEYTAIAFFL PSILAQFLGAGVFETISASLGLNALFAFTGGLLGMHLAWKYPSRHVAIAGFALQFVALIV LALVGQPHATAGIVLAIAMLGLWLFAEGFGPGAQLMIYPALSYPTAIRATGVGFSRALSG IGSALALFILPLLQASLGTQMFWVVSLAAIIPIFFLLAVRHEPTREDIDALHE >gi|289775900|gb|GG745510.1| GENE 224 239378 - 240256 955 292 aa, chain - ## HITS:1 COG:DR1358 KEGG:ns NR:ns ## COG: DR1358 COG1464 # Protein_GI_number: 15806375 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Deinococcus radiodurans # 47 274 20 244 256 98 30.0 1e-20 MTTEQFELRKARRWPWLAALAVIILLAIAFWWWRGHTQSQQVVFGSTLKIHYEPAMAGEQ RIIEYINQHIAPDYGLKLEAVGVQDPVQADRAVAEGQYAGTIYQHQWWLKQVVDANGFAL STTVPVFQWAFGIYSDRYSSVQALPNGATIVVPDDGANQGQALWLLQRIGLISLDPAVEP RTAKLKNIVGNPHQFVFKELDLLTMPRALNSVDAAIGYVSQFDAGKVPREKGILFPPAPR TFASQLVIGTPYLSQENIVKLKQAFSDPRIQTWLQTTDDPLVKDVLVPVSAE >gi|289775900|gb|GG745510.1| GENE 225 240253 - 240951 813 232 aa, chain - ## HITS:1 COG:YPO1319 KEGG:ns NR:ns ## COG: YPO1319 COG2011 # Protein_GI_number: 16121601 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Yersinia pestis # 12 226 7 221 223 137 46.0 1e-32 MKPTVISQDTPWGEIPSLLLPAYGETWLMVAIVMLFVVTLGGLVGVVLFNASPRGLFPHA LLYRLLNWVVNMGRSLPFLVLMAAIIPFTYWLTGTTIGIPAAVVPMIAAGVPFFGRLVEN ALRELPAEVTAVGVVCGGSRWQIIASAQLSEALPALVAAVTLNLVSMIEYSAIAGTIGAG GIGYLAVVYGYQRFDNHIMIATIVALIATIQLIQFLGDRLVNRLRHTQGNLV >gi|289775900|gb|GG745510.1| GENE 226 240948 - 241970 1169 340 aa, chain - ## HITS:1 COG:YPO1318 KEGG:ns NR:ns ## COG: YPO1318 COG1135 # Protein_GI_number: 16121600 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 1 330 1 328 328 240 44.0 2e-63 MIAIDDLHKSYRTADGRLSAVLKGLSLQVPERSITAVVGPSGAGKSTLARCISLLEQPDS GSIRINGQDLSALSGEALRRERRAIGTVFQSSALLSRRTAWENVALPLAWLGVVERDIKA RVGELLESVGLSHKADAWPAQLSGGQRQRIGIARALALRPSVLLADEATSGLDPQATASV LALLKRLRDEYQLAIVLITHEMDAVRTAADAVAEIRDGTIVQYGRIEDLLARPDSLLGQQ LLPLTPAAAAHSDLLLRLSYRWDVPVATDWISRLSQQWALQIDLLGGHVEVINGRLAGRL QAGVRFQGERLSPARLQGLLAQLGITAEILDSAPLLREVV >gi|289775900|gb|GG745510.1| GENE 227 241967 - 243373 1800 468 aa, chain - ## HITS:1 COG:PA2326 KEGG:ns NR:ns ## COG: PA2326 COG2141 # Protein_GI_number: 15597522 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 5 454 3 452 469 775 82.0 0 MSSQREIRLNAFDMNCVGHQSPGLWAHPRDRSWQYKDLEYWVDLARLLERGKLDGLFIAD VLGIYDVLNGSGDAAIRQATQVPVNDPLALITPMALVTEHLGFGLTASLSFEHPYPFARR LSTLDHLTKGRVGWNIVTSYLESGARNIGQQTQTDHDTRYDYADEYLQVIYKLLEGSWED GAVLRDRERKIFSDPRKIHPINHQGQFFSVPGIHLCEPSPQRTPVLYQAGASSRGKQFAA GHAECVFVAAPSKVLLKKTVADIRRRAAEAGRDPHSILIFNLQTVIVGDTDREAQAKWQE YKQYVSYEGALALLSGWTGIDFGQYQPDQVLKYLHTNAIQSAVEAFSTADPNRQWTVQAL ADWAGIGGFGPLVVGSAQTVADELQSWVEETDVDGFNLAYAVTHETFRDVVELLVPELQK RGVFKQEYREGTLREKLFGAGPRLAAPHPGASYRRDARTAASVEEKVT >gi|289775900|gb|GG745510.1| GENE 228 243447 - 244847 1370 466 aa, chain - ## HITS:1 COG:SMb20991 KEGG:ns NR:ns ## COG: SMb20991 COG4529 # Protein_GI_number: 16264864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 2 444 9 457 487 307 42.0 3e-83 MSAEPHIVIIGGGFSGAAVAIELLRLAPNGVRVTLLEPRQSPGAGVAYSTAEPTHRINVP AARMQLAGDEEGAFDHWYRHQPAFAVDAQALRPDGSVYPQRGQFGRYVAQRFADAAASSG GRLRHLRDRALAFHQGTVTTDGGLQLKADLLVLAISHPPPSLPPQAEAWRHHPALIANPW QPGALDAIAPHARVAVMGTGLTMADTVATLDRLGHRGSIIAFSRHGLLSRGNLSGTGTTW PGDYQQGSLRQRLRQIRLDVAYAAQQGLSWQVVLDAVRQQGQRIWQALSVADRQRFLRHL RHYWDVHRYRVAPQVAEVLEARQRTGSLQVQAARLLSISGEGETLRLTLARRGGGGVQTL SVDHLILTTGPAHRALTDSQPFLQDLARRGLIRADALGMGLEVDSRSRAVAEPHVEAPPV LVAGPAARGRFGELMGLPQVADHAADVAAQALLTLGIPQDSRCPAY >gi|289775900|gb|GG745510.1| GENE 229 244894 - 246066 1645 390 aa, chain - ## HITS:1 COG:mlr5216 KEGG:ns NR:ns ## COG: mlr5216 COG2141 # Protein_GI_number: 13474348 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Mesorhizobium loti # 1 390 1 390 390 565 72.0 1e-161 MTQQAPDKINVFWFLPTHGDGRYLGTTEGGRPVDLPYLQQVALAADSLGYYGVLIPTGKS CEDSWLVASALAPLTRRLRYLVAVRPGLQPPTLAARMAATLDRLSEGRLLINVVTGGDPV ENKGDGIFLSHSERYQVTREFLDVYTRLLRGEKVDYHGEHIHVEGAEVLFPPVQENGPPL YFGGSSEAAIDVAAEQIDSYLTWGEPPELVAEKLAVVRERAAARGRTLQYGIRLHVIVRE TEEEAWAAADRLIAHLDDDTIAQAQKIFARMDSAGQARMSALHQGSRDNLRIAPNLWAGV GLVRGGAGTALVGNPQQVAERIREYQALGISNFIFSGYPHLEEAHRFAELVMPLLPLENA ASSKARSVNTGPFGETIGGDKRPVRQVSAS >gi|289775900|gb|GG745510.1| GENE 230 246338 - 248281 2091 647 aa, chain + ## HITS:1 COG:PA2354 KEGG:ns NR:ns ## COG: PA2354 COG1221 # Protein_GI_number: 15597550 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Pseudomonas aeruginosa # 4 333 15 361 376 316 51.0 9e-86 MLNPESPSTAPALIDPASKAFQSLLDKLAPTEATVLIVGETGTGKEVVARYLHHHSARRQ QPFLAVNCGALTESLAEAELFGHEKGAFTGAQQGQPGWFEAAEGGTLLLDEIGELSLPLQ VKLLRVLQEREITRVGSRKAIKVNVRVIAATHVDLAQAIRERRFREDLYYRLNIAVVPLP PLRQRRQDIPLLAHHFLSLYARRLGRPTLRLAPESLARLMDYSWPGNIRELENTLHNAVL LSKEEEISPAQLRLATLNDAPAPASDHELDDFIRHQLALPGEPLWQRVTSALIRHAMAHC DDNQSQAAALLGISRHTLRTQLANLGLIKSRRRPPAPPRAFANAAGADRELRIGYQRFGS LGILKARQSLETAFASLGVNVLWSEFPAGPQLLHALACNEIDFGTTGEAPPVFAQASNSE LMYVAWEPPAPRSVAMVVPQESDIRQLSDLRGKRIALNKGSNVHWLLLQILEDAGLGLND VRVVYTPPKYPLTASDYLAVDAWMMWDPLLSDAEHTGELRVVASGEGRVNNHQFYLSRRD YLAQHGDIMRRLLTELTHTGQFIDSHRGEAARLLSAELGIDARSLSMALARRSHRPRPMD LSVIRAQQTIADRFYALGLIAKPVPVREAVWYGEPAPGVISPLMAVS >gi|289775900|gb|GG745510.1| GENE 231 248378 - 249133 720 251 aa, chain + ## HITS:1 COG:exo KEGG:ns NR:ns ## COG: exo COG0258 # Protein_GI_number: 16130705 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Escherichia coli K12 # 1 251 31 281 281 431 82.0 1e-121 MAVHLLIVDALNLIRRIHAVQGSPCVDTCLHALEQLIVHSQPTHAVAVFDDEDRAHGWRH QRLPEYKAGRAPMPETLVAEMPALRAAFEQRGIRCWASPGSEADDLAATLAVKVAQAGHQ ATIVSTDKGYCQLLSPTIRIRDYFQKRWLDAPFIASEFGVTPEQLADYWGLAGISSSKVP GVAGIGPKSAAQLLNEFQDLEGLYARLAEVPEKWRKKLAAHQEMAFTCREVARLQTDLQL DGNLQQLRLTR >gi|289775900|gb|GG745510.1| GENE 232 249204 - 250352 1439 382 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 382 2 383 383 645 85.0 0 MANRMILNETAWFGRGAINALTDEVARRGYRKALIVTDSTLARCGVAAKVTDKLDAAGLA WDMFSDVIPNPTIAVVQQGLQAFQRSGADYLIAIGGGSPQDTCKAIGIIQRNPEFADVRS LEGLSPTRQPSVPIFAVPTTAGTAAEVTINYVITDEEQRRKFVCVDPHDIPQVAFIDADM MDAMPPALKAATGVDALTHAIEGYLTRGAWALTDALHLKAIEIIAGALRGSVAGDAGAGE AMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRFNAEATGEKYR DIARSMGVRVEALSLTAARQAAVEAVCQLNRDVGIPGHLREVGVRKEDIPALAQAALEDV CTGGNPREASLADIVGLYQAAW >gi|289775900|gb|GG745510.1| GENE 233 250380 - 251027 950 215 aa, chain - ## HITS:1 COG:STM2974 KEGG:ns NR:ns ## COG: STM2974 COG0235 # Protein_GI_number: 16766279 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 1 215 1 215 215 414 94.0 1e-116 MERNRLARQIIDTCLEMTRLGLNQGTAGNVSVRYQGGMLITPTGIPYEKLTEDKIVFIDA DGQHEQGKLPSSEWRFHQAAYQTRPDAQAVVHNHAVHCTAVSILNRPIPAIHYMIAAAGG NSIPCAPYATFGTRELSEHVAVALKHRKATLLQHHGLIACEASLEKALWLAHEVEVLAQL YLSTLAIIDPVPVLDDEAIAIVLEKFKTYGLRIEE >gi|289775900|gb|GG745510.1| GENE 234 251633 - 252904 1709 423 aa, chain + ## HITS:1 COG:fucP KEGG:ns NR:ns ## COG: fucP COG0738 # Protein_GI_number: 16130708 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Escherichia coli K12 # 2 423 17 438 438 726 90.0 0 MESGQSKSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYF IIPIPAGMLMKKFSYKAGILTGLFLYACGAALFWPAAEVMNYTLFLIGLFIIAAGLGCLE TAANPFVTVLGPESGGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQPQDVLDKMTPE QLSAWKHSLVLSVQTPYMIIVAIVLLVALLIVCTRFPSLQSDDHSDSAQSTFLASLTRLM RIRHWRWAVLAQFCYVGAQTACWSYLIRYAIEEIPGMTAGFAANYLTATMVCFFIGRFTG TWLIRRFAPHNVLAIYAFIAMLLCLLSAFSGGHVGLLALTLCSAFMSIQYPTIFSLGIKH LGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELVPALCFAIIFIFARFRSQA ATN >gi|289775900|gb|GG745510.1| GENE 235 252937 - 254712 2372 591 aa, chain + ## HITS:1 COG:STM2976 KEGG:ns NR:ns ## COG: STM2976 COG2407 # Protein_GI_number: 16766280 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Salmonella typhimurium LT2 # 1 591 1 591 591 1158 94.0 0 MKKISLPKIGIRPVIDGRRMGVRESLEAQTMNMAKATAALISEKLRHACGARVECVIADT CIAGMAESAACEEKFSSQNVGVTITVTPCWCYGSETIDMDPLRPKAIWGFNGTERPGAVY LAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSL GGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDHKIYDETELEMALAWADKHFRY GEDQNAEQYKRNETQSRAVLKESLLMAMCIRDMMQGNPKLAEKGLVEESLGYNAIAAGFQ GQRHWTDQYPNGDTAEALLNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFA DVRTYWSPDAVERVTGQPLTGRAEHGIIHLINSGSAALDGSCQQRDAQGNPTMKPHWEIE QNEADACLAATEWCPAIHEYFRGGGFSSRFLTEGGVPFTMSRVNIIKGLGPVLQIAEGWS VALPKAMHDQLDARTNSTWPTTWFAPRLTGKGPFSDVYSVMANWGANHGVLTIGHVGADF ITLAAMLRIPVCMHNVEAAKIYRPSAWAAHGMDIEGQDYRACQNYGPLYKR >gi|289775900|gb|GG745510.1| GENE 236 254820 - 256238 1501 472 aa, chain + ## HITS:1 COG:STM2977 KEGG:ns NR:ns ## COG: STM2977 COG1070 # Protein_GI_number: 16766281 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Salmonella typhimurium LT2 # 1 470 1 470 472 786 82.0 0 MKQDVILVLDCGATNVRAMAVDRQGNIIARAATANASDIAAENSDWHQWSLEAIMQRFAD CCRQIHDQLASCTVRGITVTTFGVDGALVDEQGALLYPIISWKCPRTAAVMENISQYMPA HQLQQIAGVGAFAFNTLYKLVWLKENHPQLLTQAHAWLFISSLINHRLTGEFTTDLTMAG TSQMLDLRQRDFSAPILQATGLPRRLFPRLVEAGQPIGALLPEAAALLGLPVGIPVISAG HDTQFALFGAGAGQDEPVLSSGTWEILMVRSAQVDTSLLCDYSGSTCELDSQPGRYNPGM QWLASGVLEWVRKLLWSADTPWQTLIAEAQAIPPGAQGVRMQCDLLASQHAGWQGVTLNT TRGHFYRAALEGLSDQLAQHLQTLENIGGFRAKELLLVGGGSRNALWNQIKADRLGIPIK VLDDAETTVAGAAMFGWYGVGEFSSPEQARAQVAYRYRYFWPQTEPELTEEA >gi|289775900|gb|GG745510.1| GENE 237 256240 - 256662 577 140 aa, chain + ## HITS:1 COG:ECs3664 KEGG:ns NR:ns ## COG: ECs3664 COG4154 # Protein_GI_number: 15832918 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 252 93.0 1e-67 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL FELDSYAPPLVMMAAVEGDALDPTVEQRYRQALSAQAPCPDIVRIDRFAFYDRAQKAFAI VITGERAKYGNILLKKGVTP >gi|289775900|gb|GG745510.1| GENE 238 256721 - 257431 884 236 aa, chain + ## HITS:1 COG:STM2979 KEGG:ns NR:ns ## COG: STM2979 COG1349 # Protein_GI_number: 16766283 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 235 1 235 236 405 85.0 1e-113 MKAARQQAIVDLLITHSSLTTETLSKQLNVSRETIRRDLSELQAQGKVLRNHGRAKVIHQ RSQDSGDPFHMRLKSHYAHKADIAREALAWIDEGMVIALDASSTCWYLARQLPDRPLHVF TNSQPICQELAKRDQITLTCSGGTLQRKYGCYVNPALISQLKSLEIDLFIFSCEGIDPQG ALWDSNAFNADFKSILLKRAAQSLLLIDKSKFNRSGEARIGHLDDVTHIVSDAPQP >gi|289775900|gb|GG745510.1| GENE 239 257480 - 258580 1636 366 aa, chain - ## HITS:1 COG:ECs3666 KEGG:ns NR:ns ## COG: ECs3666 COG2933 # Protein_GI_number: 15832920 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 726 92.0 0 MNKVVLYCRPGFEKECAAEITDKAARLEVFGFARVKEDSGYVIFEGYQQDDGEKLVRDLP FSSLIFARQMFVVGELLRDLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELMKFC RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD NGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVAALMAQWLVNGWCRE TIFNLKLPMKKRYEEVSQNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRLWAAVG GRRDER >gi|289775900|gb|GG745510.1| GENE 240 258573 - 258968 633 131 aa, chain - ## HITS:1 COG:ECs3667 KEGG:ns NR:ns ## COG: ECs3667 COG2363 # Protein_GI_number: 15832921 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 191 92.0 2e-49 MTSRFMLIFAAISGFIFVALGAFGAHVLSQSLGAAEMAWIHTGLEYQAFHTLAIFGLAVA MQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWVLMLIGA IRLKRKGVVHE >gi|289775900|gb|GG745510.1| GENE 241 258988 - 259905 811 305 aa, chain - ## HITS:1 COG:ECs3668 KEGG:ns NR:ns ## COG: ECs3668 COG0583 # Protein_GI_number: 15832922 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 585 96.0 1e-167 MSKRLPPLNALRVFDAAARHLSFTRAADELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYFQDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIQWLVPRLTSFNSAY PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGDKAL KTPADLAQHTLLHDASRRDWQTYTRQLGLSHINVQQGPIFSHSAMVLQAAIHGQGVALAN NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAASEQEKFR FRYEQ >gi|289775900|gb|GG745510.1| GENE 242 260257 - 260487 366 76 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0893 NR:ns ## KEGG: Kvar_0893 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 76 1 76 76 137 100.0 1e-31 MKMTKAAAIISACMLTLGLSACSSNYVMHTNDGRTIVTDGKPQTDNDTGMISYKDAWGNK QQINRSDVKQLGELDE >gi|289775900|gb|GG745510.1| GENE 243 260679 - 261884 1597 401 aa, chain + ## HITS:1 COG:csdA KEGG:ns NR:ns ## COG: csdA COG0520 # Protein_GI_number: 16130717 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 401 1 401 401 656 84.0 0 MNAFNPAHFRAQFPALADAGVYLDSAATALKPQAVIDASDQFYRLSAGNVHRSQFAAAQR LTERYEAARERVAAWLNAPSGKDIVWTRGTTEAINMVAQSYVRPRLQPGDEIIVSEAEHH ANLVPWLMVAGQTGARVVKLPLGADRLPDIASLSALITPRSRVLAIGQMSNVTGGCPDLA QAIRLAHAAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGALYGKSELLA AMSPWLGGGKMIAEVSFDGFTPQPAPYGLEAGTPNVAGVIGLSAALEWLAQSDIGQAENW SRSLASLAEEALAKRPGFRSFRCQQSSLLAFEFDGVHHSDLVTLLAESGIALRAGQHCAQ PLLAALGVSGTLRASFAPYNTQDDVAALVHAVDRALEILVD >gi|289775900|gb|GG745510.1| GENE 244 261884 - 262321 508 145 aa, chain + ## HITS:1 COG:ECs3671 KEGG:ns NR:ns ## COG: ECs3671 COG2166 # Protein_GI_number: 15832925 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli O157:H7 # 5 143 9 147 147 214 79.0 3e-56 MTTLHPFGTTITDATLRQTFAPLNQWEDKYRQLILLGKKLPTLTDERKAQAREIAGCENR VWLGYEEDAEGRLHFFGDSEGRIVRGLLAVLLTAVEGKSAAELLAQDPLALFDELGLRGQ LSASRSQGLSALSEAVLAAAREVEV >gi|289775900|gb|GG745510.1| GENE 245 262462 - 263271 1012 269 aa, chain - ## HITS:1 COG:ygdL KEGG:ns NR:ns ## COG: ygdL COG1179 # Protein_GI_number: 16130719 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Escherichia coli K12 # 1 267 1 267 268 482 92.0 1e-136 MSVVISDAWRQRFGGTARLYGEKALQCFADAHVCVVGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALSGNVGLAKAEVMAERIRLINPECRVTVVDDFVTPENVAEYLGV GFSYVIDAIDSVRPKAALIAWCRRYKVPLVTTGGAGGQIDPTQIQVADLAKTIQDPLAAK LRERLKSQFGVVKNSKGKLGVDCVFSTEALVYPQADGSVCAMKSTAEGPKRMDCASGFGA ATMVTATFGFVAVSHALKKMLAKAERQTT >gi|289775900|gb|GG745510.1| GENE 246 263359 - 264456 1359 365 aa, chain - ## HITS:1 COG:STM2988 KEGG:ns NR:ns ## COG: STM2988 COG2821 # Protein_GI_number: 16766292 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Salmonella typhimurium LT2 # 1 365 1 365 365 701 94.0 0 MKGRWAKYVATGAMLAMLAACSSKPTDRGQQYSDGKFTQPFSLVNQPDAVGAPINAGDFS EQVNQIRNASPRLYNSQSNVYNALQEWLRAGGDTRTLRQFGIDAWQMQGTDNYGNVQFTG YYTPVVQARHTRQGEFQYPIYRMPPKRGKLPSRASIYAGALSDNYVLAYSNSLMDNFIMD VQGSGYIDFGDGSPLNFFSYAGKNGWPYRSIGKVLIDRGEVKKEDMSMQAIREWGEKHSE AEVRELLEQNPSFVFFKPQSFAPVKGASAVPLIGRASVASDRSIIPPGTTLLAEVPLLDN NGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPDAGHRAGWYNHYGRVWVLKNAPGAG NVFSG >gi|289775900|gb|GG745510.1| GENE 247 265059 - 266114 1301 351 aa, chain - ## HITS:1 COG:STM2016 KEGG:ns NR:ns ## COG: STM2016 COG2038 # Protein_GI_number: 16765346 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 351 1 351 356 525 83.0 1e-149 MENLNTVLRAIPAPDADAMVRAQHHIDGLLKPPGSLGRLEALAVQLAGMPGLGGQPQVAK KALLVMCADHGVWDEGVAISPKAVTAIQAANMTRGTTGVCVLAAQAGAQVHVIDVGIDSE PLPGVVNMRVARGCGNIARGPAMSREQGQELLLEVMRYTRALAREGVTLFGVGELGMANT TPAAAIVSVLTGSDAQEVVGIGANLPLAKVGNKVEVVRRAIAVNQPDPNDGLDVLSKVGG FDLLGMAGVMLGAASCGLPVVLDGFLSYAAALAACQIAPEVKPYLIPSHYSAEKGARIAL AHLGLEPYLNMGMRLGEGSGAALAMPIVEAACAMYHRMGMLAASNIVLPKG >gi|289775900|gb|GG745510.1| GENE 248 266158 - 266703 617 181 aa, chain - ## HITS:1 COG:STM2018 KEGG:ns NR:ns ## COG: STM2018 COG2087 # Protein_GI_number: 16765348 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 313 87.0 9e-86 MLTLVTGGARSGKSRHAEALIADAPQVLYIATSQIFDDEMAARIQHHRDGRPAHWRTAER WQQLDELITPDIAPAEAILLECITTMVTNLLFALGGDSDPDGWDYAAMERAIDDEMGVLI AACQRCPAHVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADAVWLVVSGIGVKI K >gi|289775900|gb|GG745510.1| GENE 249 266697 - 268220 1883 507 aa, chain - ## HITS:1 COG:STM2019 KEGG:ns NR:ns ## COG: STM2019 COG1492 # Protein_GI_number: 16765349 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Salmonella typhimurium LT2 # 1 506 1 506 506 811 80.0 0 MTLAVMLQGTASDVGKSVLVAGLCRIFHQDGLRTAPFKSQNMALNSGITPDGKEMGRAQI FQAEAAGIAPDVRMNPVLLKPTSDRQAQVVLMGQVATSMDAVSYHQYKSRLREQILAVYQ SLAGEYEALVLEGAGSPAEINLRDRDIVNMGMAEMAQCPVILVADIDRGGVFAAIYGTLA LLQPQERARVKGVIINKFRGDVALLRSGIEQIEALTGVPVLGVMPWLDVDLEDEDGVALQ AGKYHRTDRRDIDIAVVHLPHIANFTDFNALAAQPDVRVRYVRDPQALADADLVILPGSK NTLGDLCWLRESGMAHAVEQARQRKVPLLGICGGYQMLGETIIDEVESGLGTQPGLGVLK TVTHFAQHKTTTQVQATLGSALPDWLADAAGLRVSGYEIHMGETRREAGCPPLLQLHKAG QAVDDGAISDDGLAFGTYLHGLFDSDAFTRALLNGLRQRKGLAPLDSALEYARYKTRQFD RLAEAMREHIAIDKIYAIMRQHQEPLC >gi|289775900|gb|GG745510.1| GENE 250 268217 - 269041 241 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 224 1 227 245 97 27 1e-18 MLATTDLWFRYQDEPVLKGLTLDFSRHAVTGLVGANGCGKSTLFMNLSGLLRPQQGAVLW QGEALNYSKRGLLALRQQVATVFQDPDQQIFYTDIDSDIAFSLRNLGVAEEEIARRVDEA LTLVDAQGFRQQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPRGRAQMIAIIR RIVGQGRRVVISSHDIDLIYEVSDAVYVLRHGEVLAAGDPGEVFACAAIMDRAGLTQPWL VKLHSELGLPLCKTEAEFFQRMHNNAIGAIKEAS >gi|289775900|gb|GG745510.1| GENE 251 269050 - 269751 730 233 aa, chain - ## HITS:1 COG:STM2021 KEGG:ns NR:ns ## COG: STM2021 COG0619 # Protein_GI_number: 16765351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Salmonella typhimurium LT2 # 9 233 1 225 225 305 75.0 4e-83 MRGADSAVMTGFDRLSYQSRWLQVAPERKFLLWLLLMVLAFTLPAWGQALTLALTAALTC WLLRVSFWRWCRWMALPFGFLLVGVLTIVFSVSRDPQMLLASIRLGAFSIGVSTPGLVVA GETFWRSLAAMAATLWLVLNLPFPQLIILLKRGRVPRLLTEQILLTWRFIFILLDEAMAI HRAQTLRFGYGSVPQGYRSLAMLVGLLFTRVLLRYQQMSTALDIKLYQGDFHL >gi|289775900|gb|GG745510.1| GENE 252 269714 - 269995 373 93 aa, chain - ## HITS:1 COG:STM2022 KEGG:ns NR:ns ## COG: STM2022 COG1930 # Protein_GI_number: 16765352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 92 1 92 93 165 88.0 2e-41 MKKPLILLAMVVALMILPFFINHGGEFGGSDGEAESQIQVVAPDYQPWFQPLYEPASGEI ESLLFTLQGSLGAAVIFYILGYARGRQRRDDRV >gi|289775900|gb|GG745510.1| GENE 253 269997 - 270734 987 245 aa, chain - ## HITS:1 COG:STM2023 KEGG:ns NR:ns ## COG: STM2023 COG0310 # Protein_GI_number: 16765353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 385 86.0 1e-107 MNQVKSLKQLSYGGLAAAVLLIIVPQEAFAMHIMEGFLPPMWALAWWLLFLPCLWYGLVR LRRIVQEESNQKVLLALCGAFIFVLSALKIPSVTGSCSHPTGVGLAVILFGPGVVAVLGA IVLLFQALLLAHGGLTTLGANGMSMAVIGPMVGYLVWKLACRAGIRRDVGVFLCAMLADL MTYFVTSVQLGVAFPDPATGAGGSILKFMGIFCLTQIPIAIAEGLLTVMIYDQLTKRRLI AAEGH >gi|289775900|gb|GG745510.1| GENE 254 270734 - 271444 1011 236 aa, chain - ## HITS:1 COG:STM2024 KEGG:ns NR:ns ## COG: STM2024 COG2243 # Protein_GI_number: 16765354 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Salmonella typhimurium LT2 # 1 236 1 236 237 407 87.0 1e-113 MSGKLYALSTGPGAADLITVRAARILGQLDVLYAPAGRKGGDSLALSIVREYLGAHTEVR CCHFPMSADSAEKEAVWNDVAAALAQEVAAGRQVGFITLGDAMLFSTWVFLLQRIGCPDW LEIVPGVTSFAAIAARAKTPLAMEQQSLAVISCTAPETDIAAALRQHDSLVLMKVYGRFA RIKALLAQAGLLDAALMMSEATLPGEQCWRRLREVSDDQPLPYFSTILVNKQWEEA >gi|289775900|gb|GG745510.1| GENE 255 271441 - 272235 1114 264 aa, chain - ## HITS:1 COG:STM2025 KEGG:ns NR:ns ## COG: STM2025 COG4822 # Protein_GI_number: 16765355 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Salmonella typhimurium LT2 # 1 264 1 264 264 467 87.0 1e-131 MKKALLVVSFGTSYHDTREKNITACERDLAASCPDRTLFRAFTSGMIIRKLRQRDGIHID TPLQALQKLAEQGYQDVAIQSLHIINGDEYEKIVREVQSLRPRFQRLTLGVPLLSGHGDY VQLMQALRQQMPPLAATERVVFMGHGASHHAFAAYACLDHMMAVQGFPARVGAVESYPEV DIVINELSRQGVTGVHLMPLMLVAGDHAINDMASDEDDSWKTRFNAAGIPATPWLNGLGE NPAVRAMFVAHLQQALNNAMEKAA >gi|289775900|gb|GG745510.1| GENE 256 272246 - 273031 742 261 aa, chain - ## HITS:1 COG:STM2026 KEGG:ns NR:ns ## COG: STM2026 COG2099 # Protein_GI_number: 16765356 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Salmonella typhimurium LT2 # 1 260 1 260 263 419 78.0 1e-117 MNHGDVLVIGGTSDARAICQQLDAAGVRYTLSVATPTGERLAGDIRGRIRCGRMEWQQMA EWLRAQRTRWVIDASHPYAEVVSQNIVRACASVGVLLSRYQRPEQLSDLRHPLLHVVGDL NEACALARRLGERILLTTGSKDLAAWRAGLAEKTLLARVLPVPEVVQHCSDLGFGVGEIF ALCGPFSAEFNAAFYRQCRADVVVTKASGAEGGYQEKVQPCLDAGIPCIVITRPAPLVKG DELLESQADFATRLTRWLSAT >gi|289775900|gb|GG745510.1| GENE 257 273028 - 273753 1090 241 aa, chain - ## HITS:1 COG:STM2027 KEGG:ns NR:ns ## COG: STM2027 COG1010 # Protein_GI_number: 16765357 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 444 92.0 1e-125 MLSVIGIGPGSQAMMTMEAVEALQAAEIVVGYKTYTHLVKAFTGDKQVIKTGMCKEIERC QAAIELAQAGNNVALISSGDAGIYGMAGLVLELVNKQQLDIEVRLIPGMTASIAAASLLG APLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRSRGREGHLARAFALLAAS KSPDTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYIDNGLMITPRGYA L >gi|289775900|gb|GG745510.1| GENE 258 273753 - 274808 1106 351 aa, chain - ## HITS:1 COG:STM2028 KEGG:ns NR:ns ## COG: STM2028 COG2073 # Protein_GI_number: 16765358 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Salmonella typhimurium LT2 # 1 351 1 351 351 571 82.0 1e-163 MNTVKPESIALFCLTPGGVRLAKRLAAMLPLTCYTSEALQEAGFIPFNGGFASAAREAFS SFSALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERARHVISLLSGHAGGANALTRYLA GMLDADPVITTATDVNELAALDTLAFQLNARMTDFRAAVKTVNQMLVSGMRVGLWCDAEF TEALSRCDQRGFIPVSDLARLPALDALICVTLRRSLPPLPVPHWKLVPQRVVAGIGCRRD TPCSLLCSLLDRQLAAQRLDPLALKAIGSVSLKANEPGLRQLAHRCRVPFETFSAEALRE HEHRFPASSFVRETVGVGSVSGPVAWLLSQGNLSGETLREQGVTITLGVTH >gi|289775900|gb|GG745510.1| GENE 259 274789 - 275562 1108 257 aa, chain - ## HITS:1 COG:STM2029 KEGG:ns NR:ns ## COG: STM2029 COG2875 # Protein_GI_number: 16765359 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 467 93.0 1e-131 MAETFDPHCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLINTELLAYCPPQAECHD SAALHLEQILDLMEAGVKAGKTVVRLQTGDVSLYGSVREQGEELTRRGIRWQVVPGVSAF LGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAFASHQTSMAIYLSVQRIHRVA ERLVEGGYPATTPVAVIYKATWPESQTVRGTLADIGDKVRDAGIRKTALILVGPFLGDEY HYSKLYAADFSHEYRKA >gi|289775900|gb|GG745510.1| GENE 260 275555 - 276124 677 189 aa, chain - ## HITS:1 COG:STM2030 KEGG:ns NR:ns ## COG: STM2030 COG2242 # Protein_GI_number: 16765360 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Salmonella typhimurium LT2 # 1 188 1 188 192 285 76.0 2e-77 MKDELFLRGAQVPMTKEAVRALALAKLELHRARHLIDIGAGTGSVSIEAALQNPALRVTA IERQADALRLLADNRQRFGCDNIAIVAGVAPLAVADKADAIFMGGSGGHLTALIDWSLAQ LHPGGRLVMTFILQENLHSALGHLRQCGIPEVDCQQLAVSTLATLGSGHYFKPHNPVFVI ACQKEENHG >gi|289775900|gb|GG745510.1| GENE 261 276114 - 276563 527 149 aa, chain - ## HITS:1 COG:STM2031 KEGG:ns NR:ns ## COG: STM2031 COG2241 # Protein_GI_number: 16765361 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 1 # Organism: Salmonella typhimurium LT2 # 3 149 55 201 201 244 82.0 4e-65 MPALLAWIEARAGRHVVVLASGDPLFYGIGTRLIAHFGRERVQVIPGISAVQYLCARAGI DMNDMWLTSSHGRAVSFDALAAHRKVAMVTDGRCGPREIAAQLTARGKGHRWMVIGENLA MENERIHWLPVSAVEDEYEMNAVVILDER >gi|289775900|gb|GG745510.1| GENE 262 277248 - 278348 1398 366 aa, chain - ## HITS:1 COG:STM2032 KEGG:ns NR:ns ## COG: STM2032 COG1903 # Protein_GI_number: 16765362 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Salmonella typhimurium LT2 # 1 366 1 366 379 615 88.0 1e-176 MSDQTFDAPVWHHGKALRKGYTTGSCATAAAKVAALMVMRQHLIHQVSIVTPSGVTLCLN VESPHVEGQQAVAAIRKDGGDDVDATHGMLIFARVTLNDSGEISLQGGEGIGTVTRKGIG LPTGSPAINRTPRHTIETAVREAIGPSRGAQVEIFAPEGVLRAQKTYNARLGILGGISII GTTGIVTPMSEESWKRSLSLELEIKRAAGLERVVLVPGNHGERFVREQMGIDPQVVVTMS NFVGYMIEEAVRLGFRQIVLIGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPL PLLTLVSECDTTEAAMEHIDAWGYQRLYNHLAERICQRVLEMLRFTQHPPTCDAVLFSFD NQVLGS >gi|289775900|gb|GG745510.1| GENE 263 278345 - 278980 830 211 aa, chain - ## HITS:1 COG:STM2033 KEGG:ns NR:ns ## COG: STM2033 COG2082 # Protein_GI_number: 16765363 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Salmonella typhimurium LT2 # 1 210 1 210 210 308 81.0 6e-84 MQYIQQPQAIEAKSFDIISEIIAETRPDYRFASPLHEAIIKRVIHTTADFDWLDILWFSP DALIALSEALSRPCTLYTDTTMALSGINKTLLARFGGECRCYISDPRVVREAQSRGMTRS MAAVDIAVQESGEKVFVFGNAPTALFRLLEHRETAIGGVVGVPVGFVGAAESKAALSESG LPAIAALGRKGGSNVAAAIVNALLYHLREAQ >gi|289775900|gb|GG745510.1| GENE 264 278991 - 279950 1081 319 aa, chain - ## HITS:1 COG:STM2034 KEGG:ns NR:ns ## COG: STM2034 COG1270 # Protein_GI_number: 16765364 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Salmonella typhimurium LT2 # 1 319 1 319 319 461 81.0 1e-130 MTLLAWCVAWILDVLIGDPPHWPHPVRWIGRLITVSQRVVRRVCHSDRALRIGGGVMWLV VTGLTWGVAWGALALAHGLHPWLGWLVEVWMIFTVLAGRCLAQSAMAVARPLQAGDLAES RHKLSWIVGRDTSQLQPAQINRAVVETVAENTVDGIIAPLFFLLLGGAPLAMAYKAVNTL DSMVGYKHEKYRAIGMVSARLDDVANFLPARLSWLLLSLAAVLCREDGARALRTGWRDRY QHSSPNCAWPEATVAGALGIRLGGPNDYFGQRVEKPWIGDAVRDIAVDDISRTIRLMWVA SSLALALFIGVRYWLVGAA >gi|289775900|gb|GG745510.1| GENE 265 279947 - 281323 1444 458 aa, chain - ## HITS:1 COG:STM2035 KEGG:ns NR:ns ## COG: STM2035 COG1797 # Protein_GI_number: 16765365 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Salmonella typhimurium LT2 # 1 456 1 457 459 735 78.0 0 MATRRAFILAGTGSGCGKTTVTLGLLSLLQQRGLRVQPCKVGPDYLDTAWHTAISGVASR NLDSFMLPAPILNALFAEQLQQADIAVIEGVMGLYDGYGIDPNYCSSAAMAKQLGCPVIL LVDGKAVSTSIAATVMGFQHFDPALNIAGVIVNRVNSEAHFQLLKSAIERYCQVPVLGYV PRVEGVALPERHLGLVTARESVVNQQAWRDFASLLGRTLDIDRLLALSELAAMPAGEWGE QLAADAGEGLTLALADDEAFNFYYPDNLALLARCGVKMVRFSPLRDRQLPACQMIWLGGG YPELHAAGLSANHEMLAQLRAAHRRGVAIYAECGGLMYLGTTLEVTGGERYAMADIIPGH SRMGTRLTRFGYCEAQAQQQTLLAAPGEWLRGHEFHYSDFSPATPAVLACRKQRDGKTLQ QWPGGWQSGSAFASYLHVHFAQRPTMLNHWLRAARRAQ >gi|289775900|gb|GG745510.1| GENE 266 281875 - 282786 992 303 aa, chain - ## HITS:1 COG:STM2036_1 KEGG:ns NR:ns ## COG: STM2036_1 COG4936 # Protein_GI_number: 16765366 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Salmonella typhimurium LT2 # 1 199 1 199 199 364 86.0 1e-101 MISASTLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPEHSGRC RMSDRCGGLEASKNDQLCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDIELVDIL NVDDRWQDDPALVQAFRDVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPPQNDP AQASRAASPHDGKMKKALRYIDAHLSDELRLEDVATHVYLSPYYFSKLFKKYQGIGFNAW VNQQRMASAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAFRQQINAGSQT ESF >gi|289775900|gb|GG745510.1| GENE 267 282989 - 283798 883 269 aa, chain - ## HITS:1 COG:STM2037 KEGG:ns NR:ns ## COG: STM2037 COG0580 # Protein_GI_number: 16765367 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Salmonella typhimurium LT2 # 1 262 1 262 264 422 85.0 1e-118 MNGSLRAQCIAEFLGTGLFLFFGICCLSALKLAGASLGLWEICIIWGLGISLAVYLTAGI SGGHLNPAVTVALWLFACFPGRKVLPYIVAQVAGAFGGAVLAWILYSTLFTQFETVHHMV RGSLESLQLASIFSTYPAPELSIWHAALVEVVITSMLMGMIMALTDDGNGVPKGPLAPLL IGILVAVIGASTGPLTGFAMNPARDFGPKLFAWLAGWGDIAMTGGRDIPYFIVPIIAPLL GACLGAAIYRFLIANNLPCHTCVEEKNTR >gi|289775900|gb|GG745510.1| GENE 268 284323 - 284607 210 94 aa, chain + ## HITS:1 COG:STM2038 KEGG:ns NR:ns ## COG: STM2038 COG4577 # Protein_GI_number: 16765368 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 127 95.0 4e-30 MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDA GAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ >gi|289775900|gb|GG745510.1| GENE 269 284604 - 285416 1152 270 aa, chain + ## HITS:1 COG:STM2039 KEGG:ns NR:ns ## COG: STM2039 COG4816 # Protein_GI_number: 16765369 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 38 270 1 233 233 400 96.0 1e-111 MSSNELVEQIMAQVIARVATPEQQALPDTPHPTGETAMAEKSCSLTEFVGTAIGDTLGLV IANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGG AGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFG APLGRACGIIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAV RQAVISAREIGKTVLGTLGAEPKNDRPSYI >gi|289775900|gb|GG745510.1| GENE 270 285435 - 287099 2245 554 aa, chain + ## HITS:1 COG:STM2040 KEGG:ns NR:ns ## COG: STM2040 COG4909 # Protein_GI_number: 16765370 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Salmonella typhimurium LT2 # 1 553 1 553 554 1094 97.0 0 MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVEQFD LIDHFITRYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSHM NVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAP FNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPW SKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSV SCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFI SSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQ AVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKG GFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEE IKNIPGALDPNELG >gi|289775900|gb|GG745510.1| GENE 271 287110 - 287799 798 229 aa, chain + ## HITS:1 COG:mll6722 KEGG:ns NR:ns ## COG: mll6722 COG4909 # Protein_GI_number: 13475607 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Mesorhizobium loti # 56 229 577 751 756 120 42.0 3e-27 MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAPVAVAPVSGDSFLTEIGEAK PGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAF VAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARY AKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL >gi|289775900|gb|GG745510.1| GENE 272 287814 - 288338 667 174 aa, chain + ## HITS:1 COG:STM2042 KEGG:ns NR:ns ## COG: STM2042 COG4910 # Protein_GI_number: 16765372 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, small subunit # Organism: Salmonella typhimurium LT2 # 1 174 1 173 173 257 86.0 8e-69 MNTDAIESMVRDVLSRMNSLQDGATPAPAAPTNDTARQPKVSDYPLATRHPEWVKTATNK TLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRI LEIYNALRPYRSTQAELLAIADDLEHRYQARICAAFVREAAGLYVERKKLKGDD >gi|289775900|gb|GG745510.1| GENE 273 288351 - 290183 2201 610 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0862 NR:ns ## KEGG: Kvar_0862 # Name: not_defined # Def: diol/glycerol dehydratase reactivating factor large subunit # Organism: K.variicola # Pathway: not_defined # 1 610 1 610 610 1055 99.0 0 MCYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTGIKGTLRNVFGIQEALTQAAKA AGIQVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPE ALLSCAADAPYILVVSSAFDFADVAAMVNAATAAGYQISGIILQQDDGVLVNNRLQQPLP VIDEVQHIDRIPLGMLAAVEVALPGKIIETLSNPYGIATVFNLNAEETKNIVPMARALIG NRSAVVVKTPSGDVKARTIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGE AGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIA SMVKSDRLQMALIAREIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTD ASIINAQGEISATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDG SVQFFPSALPPAVFARVCVVKPDELVPLPGDLPLEKVRAIRRSAKSRVFVTNALRALRQV SPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALAHYRLVAGRGNIRGSEGPRNAVASGLLL SWQKGGTHGE >gi|289775900|gb|GG745510.1| GENE 274 290173 - 290523 267 116 aa, chain + ## HITS:1 COG:no KEGG:KPK_0906 NR:ns ## KEGG: KPK_0906 # Name: pduH # Def: propanediol utilization protein PduH # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 116 1 116 116 233 97.0 3e-60 MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQPRTGGDLVHHAWQAAQRSPLL VGIACDRERLIVHYKNLPASTPLFSLRYHQDRLARRNTGNNAARLVKGIPFRDRNA >gi|289775900|gb|GG745510.1| GENE 275 290542 - 290817 481 91 aa, chain + ## HITS:1 COG:STM2045 KEGG:ns NR:ns ## COG: STM2045 COG4577 # Protein_GI_number: 16765375 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 91 120 96.0 5e-28 MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAG SAAASVVGEVKSSHVIPRPHSDVEAILPKSV >gi|289775900|gb|GG745510.1| GENE 276 290839 - 291306 353 155 aa, chain + ## HITS:1 COG:STM2046 KEGG:ns NR:ns ## COG: STM2046 COG4577 # Protein_GI_number: 16765376 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 155 8 160 160 177 65.0 7e-45 MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIVGDVASVQAAVMT GAELADRQQGLVAQKVIARPGAGLLPARVEAPSPAPDAALEEENATVMDERRDPADTLPR PAEQVTCNLCLDPHCPRQKGEPRSQCLHAGKRGDA >gi|289775900|gb|GG745510.1| GENE 277 291306 - 291938 414 210 aa, chain + ## HITS:1 COG:STM2047 KEGG:ns NR:ns ## COG: STM2047 COG4869 # Protein_GI_number: 16765377 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Salmonella typhimurium LT2 # 1 207 1 207 210 321 82.0 7e-88 MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYA AEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARTLGIAAPLRMSGNLQDTPGIRLI SPFAELELSSGTIVAQRHIHMSPLDALILRVAHGDSVAVAIEGSDRRLIFDNVAVRVAPD MRLEMHIDTDEANAAGADAAQAWATLVTKP >gi|289775900|gb|GG745510.1| GENE 278 291947 - 292426 326 159 aa, chain + ## HITS:1 COG:no KEGG:KP1_4481 NR:ns ## KEGG: KP1_4481 # Name: pduM # Def: propanediol utilization protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 159 5 163 163 221 91.0 6e-57 MQQRIVEEVAARLRRRARSTATLSVAQLGEADIHSLLCQHASLRIVQVDLPLLEQLTGQR ALTAAGCALHEAMAWGVRVQLTLLPTLIPALAVKKLARLPLTFSDPPGQPVRLHAASVVT YADVARLHGGYLVLRRRPIITALAREAAVARHVQLITQE >gi|289775900|gb|GG745510.1| GENE 279 292430 - 292705 206 91 aa, chain + ## HITS:1 COG:STM2049 KEGG:ns NR:ns ## COG: STM2049 COG4576 # Protein_GI_number: 16765379 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 91 129 88.0 1e-30 MHLARVTGAVVSTQKSPSLNGKKLLLVRRVSTDDEHPFPPASGDEVAVDSVGAGVGELVL LCSGSSARHVFSGPNEAIDLAVVGIVDSLSR >gi|289775900|gb|GG745510.1| GENE 280 292716 - 293732 822 338 aa, chain + ## HITS:1 COG:STM2050_1 KEGG:ns NR:ns ## COG: STM2050_1 COG2096 # Protein_GI_number: 16765380 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 255 77.0 9e-68 MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAVLSLCVCAVAEEEHRVLLEAL QQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAAS RLHLARTVSRRAERRLVELAAEVTLRQILLRYLNRLSDCLYALARSEDHADHQRRLVAEI AARYLAASGSPASDAPKAQAGALSFHELHQLTRQAIGHARQLQVPVVVSIVDAHGTETVT WRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKVVTFGGGYP LWRDGQLIAGLGISGGSIEQDMAIAQAAMAAINVRTHQ >gi|289775900|gb|GG745510.1| GENE 281 293729 - 295114 984 461 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 461 1 474 477 383 44 1e-105 MNTAELETLIRTILSEKLAPAPVSQEQQGIFRDVGSAIDAAHQAFLRYQQCPLKTRSAII SALRETLASELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTNALTGDGGMVL FEYSPFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLKLIARIEEIAY RCSGIRNLVVTVAEPTFEATQQMMAHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPP CIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSPQE TDTLRAVCLPDGAANKKLVGKSPAELLAAAGLAVPSRPPRLLIAEVQANDPWVTCEQLMP VLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGI GVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR >gi|289775900|gb|GG745510.1| GENE 282 295126 - 296238 1070 370 aa, chain + ## HITS:1 COG:STM2052 KEGG:ns NR:ns ## COG: STM2052 COG1454 # Protein_GI_number: 16765382 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 1 369 1 369 370 566 78.0 1e-161 MHTFSLQTRLYSGPGSLAELQRFSHQHIWIVCDGFLARSPLFERLRAALPASNRVSVFSD ITPDPTIHTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTT SGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAILDPTLVISVPPTITAHTGLDVLTHA LEAWVSPQATDFTDALAEKAARLVFRALPVAVRQGDCVATRSKMHNASTLAGMAFSQAGL GLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPEAGEQ EALQALLAAVETLKQQCAIPTLKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPADGA AIAQLLESLQ >gi|289775900|gb|GG745510.1| GENE 283 296235 - 297587 1246 450 aa, chain + ## HITS:1 COG:STM2053 KEGG:ns NR:ns ## COG: STM2053 COG4656 # Protein_GI_number: 16765383 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Salmonella typhimurium LT2 # 15 450 16 451 451 652 83.0 0 MSEAIVPLPDMDPAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVD QQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYTPAIAALTPRLPEWARLHILPDVYP AGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVS RPLTLTVPLGMSLREVLALAGGATVAEPGFINGGPMMGSLMTSLETPVTKTTGGLLVLPG NHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPS LLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYEGPLRPADEMAKHRLVP VKRLISKLGLAPWYQEAPLTAVEPEVGCVTLPLRQHIGISAVPCVAPGERVTRGQLLADI PADALGAPVHASIDGQVSAITEQAITLVRG >gi|289775900|gb|GG745510.1| GENE 284 297590 - 298144 569 184 aa, chain + ## HITS:1 COG:STM2054 KEGG:ns NR:ns ## COG: STM2054 COG4577 # Protein_GI_number: 16765384 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 184 1 184 184 288 83.0 4e-78 MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGEVGAVQQAIAAG TARAGEMLVDSLVLANIHPSVLPAISGLNVVEQRQAAGIVETWSVAACISAADRAVKAAN VTLVRVHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVYRAVIPRPHDALWQQ LMEG >gi|289775900|gb|GG745510.1| GENE 285 298144 - 298494 535 116 aa, chain + ## HITS:1 COG:STM2055 KEGG:ns NR:ns ## COG: STM2055 COG4810 # Protein_GI_number: 16765385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 116 1 116 116 195 91.0 2e-50 MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIA CDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALRQVTRTLGELMRFTACPITRT >gi|289775900|gb|GG745510.1| GENE 286 298499 - 298939 316 146 aa, chain + ## HITS:1 COG:STM2056 KEGG:ns NR:ns ## COG: STM2056 COG4917 # Protein_GI_number: 16765386 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 144 1 144 150 218 77.0 2e-57 MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQAIVWTPAAIDTPGEYLENRCLYSALLTS ACEADVIALVLNADAPWSPFSPGLTAPMNRPVIGVITKADLAAPPRLQQVRAWLEAAGAE HIFITSALTGDGLDDLLACLNAEEYQ >gi|289775900|gb|GG745510.1| GENE 287 298936 - 300150 1471 404 aa, chain + ## HITS:1 COG:STM2057 KEGG:ns NR:ns ## COG: STM2057 COG0282 # Protein_GI_number: 16765387 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 654 78.0 0 MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFMLKTSAQKWQETLPIAD HHEAVTLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAP LHNPVNALGIRLFRQRLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHG TSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTR SGDIDPSILPWLVEKEGKSALQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALA LSLFAERIRATIGSYIMQMGGLDALIFTGGIGEHSARARATICRNLHFLGLALDDEKNQR SATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELTVSA >gi|289775900|gb|GG745510.1| GENE 288 300242 - 301108 871 288 aa, chain + ## HITS:1 COG:STM2058 KEGG:ns NR:ns ## COG: STM2058 COG4542 # Protein_GI_number: 16765388 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase # Organism: Salmonella typhimurium LT2 # 1 288 13 300 300 383 72.0 1e-106 MAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAMVDQLLAH WGYPPALSQQIRITLHSTIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALE PTDSTLFRQLTLFDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREAGLLANAS RLQLAWEKVQQACHCGSPQLLGEAATISAIASQQLLPKPGFDALLQLVESAGLYGLNVAH SGSVVGLLLDRRRHDVEFLQWRLAESDIAAHWPQQHLLAMVPGGVTLQ >gi|289775900|gb|GG745510.1| GENE 289 301112 - 302188 1285 358 aa, chain - ## HITS:1 COG:STM0644 KEGG:ns NR:ns ## COG: STM0644 COG0079 # Protein_GI_number: 16764021 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Salmonella typhimurium LT2 # 1 357 1 357 364 532 72.0 1e-151 MALLKSAHGGNIREAAGLLGIAPGELLDFSANINPLGMPASLRRAIVASLDCAERYPDVE YQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDC EVVEYALRECDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNI SLILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLR ERQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFCSRLKEITGLTVWPGRANYL FLRCDRQGLDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSASENDQLLAALRRALA >gi|289775900|gb|GG745510.1| GENE 290 302206 - 303459 1438 417 aa, chain - ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 417 31 447 447 736 91.0 0 MSGNNSGLSRRRLLQGAGAMWLMSVSPVGLAADARVVAVRVWPASTYTRVTVESNHVLKY RQFALSNPERVVVDLEGVNLNSVLKGMGGQIRDDDPFIQSARVGQFDPQTVRMVFELKQN VKPQLFALAPVAGFKERLVMDLYPANATDVQDPLLALLEDYNKGDLERQVPPAQSGPQPG KAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIDKEGNMKAYMTRNE DVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTRGATSTAAKYLAQTQN ASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNRVEQAGFA VLKAPDIPSILVETAFISNVEEERKLKTAKFQQEVAESILAGIKAYFADGATLARRG >gi|289775900|gb|GG745510.1| GENE 291 303687 - 305018 1565 443 aa, chain + ## HITS:1 COG:ECs3675_1 KEGG:ns NR:ns ## COG: ECs3675_1 COG0548 # Protein_GI_number: 15832929 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 540 93.0 1e-153 MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHENFSNIVNDIGLLHSLGIRLV VVYGARPQIDANLAEHHHEPVYHKQTRVTDAKTLELVKQAAGMLQLEITARLSMSLNNTP LQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDSGAIVLMGPVAVSV TGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVYNQAGEIVSELFPNEAQARVEELEAD EDYNSGTVRFLRGAVKACRSGVRRCHLISYQENGALLQELFSRDGIGTQIVMESAEQIRR ATINDIGGILELISPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKI GEMACVAVHPDYRSSSRGEVLLERIAAQARQMGLSKLFVLTTRSIHWFQERGFTPVDIDL LPESKKQMYNYQRRSKVLMADLA >gi|289775900|gb|GG745510.1| GENE 292 305250 - 305570 302 106 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0843 NR:ns ## KEGG: Kvar_0843 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 106 1 106 106 155 98.0 6e-37 METKPNWLVRHINLITAAVALYPWLLMILLLWDNQRHHQHGYAALGAAIAILFLLALTSG MNVLISSLVIFVARCSTPPLASGAAVRFCAMNSISVLWLIPLVFSY >gi|289775900|gb|GG745510.1| GENE 293 305630 - 307474 2126 614 aa, chain - ## HITS:1 COG:STM2993 KEGG:ns NR:ns ## COG: STM2993 COG0507 # Protein_GI_number: 16766295 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Salmonella typhimurium LT2 # 1 608 1 604 611 820 72.0 0 MTFEQLLLAAVEQRLLRPLDVQFALMVAQNDPPAVMLAAALLSRDAGEGHVCLPLSRLSG DEALSGKAGEIRDRLLAEAGAPEDWPALLLASSAVSCGDAPAPMILCGDRLYLNRMWRNE LTVARFFNEANRVLEMDEARLASTLNALFPATGETDWQKVAAAVALTRRISVISGGPGTG KTTTVAKLLAALIQIDDSPRCRIRLAAPTGKAAARLTESLGAALRKLPLTDAQKALIPTE ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFLG DRDQLASVEAGAVLGDICAWASSGYTAARAQELTRLTGSPVPAGEGAIAGALRDSLCLLQ KSYRFGSHSGIGSLARAVNAGARAEVKATLRQPFDDIALHPLSTTEEYEAMLGAAQQGYE RYLQLRRERAEPQAMLAAFSEFQLLCALREGPYGVSGVNERLEQRLNRQRAIALPRHSRW YDGRPIMISRNDSALGLFNGDIGIALERNGELRVWFLMPDGTIKSVQPSRLPEHDTAWAM TVHKSQGSEFEHAALILPARSVPLVTRELVYTAITRAKQRLSLYADEQVLSQAIVTRTER RSGLAEIFAGREAP >gi|289775900|gb|GG745510.1| GENE 294 307471 - 311007 4382 1178 aa, chain - ## HITS:1 COG:recB KEGG:ns NR:ns ## COG: recB COG1074 # Protein_GI_number: 16130724 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Escherichia coli K12 # 1 1177 1 1180 1180 1705 74.0 0 MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGESAYPRAISVEELL VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIADKDDAAKTLLLAERQ MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPDETLAERHQQIIGRIDALKQQWRDQV GEIEGVLENSGLDRRKYNRGNQGKWLEKVNAWAQEETLSYQLPDALEKFAQSFLLERTKA GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE ALRGDSGETLASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQPETALLLIGDPKQAIY AFRGADIFTYMKARGDVTAHYTLDTNWRSSPGMVSSVNRLFSLSDNPFMFREIPFLPVKA AAKNQGLRFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQQGRALL WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSDYRQIWRQRGVMPM LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAATIPPLSARELQRRIADDWRV TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGADIALNQLAARDKQVEMAF YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEEAS >gi|289775900|gb|GG745510.1| GENE 295 311004 - 313889 3652 961 aa, chain - ## HITS:1 COG:ECs3678 KEGG:ns NR:ns ## COG: ECs3678 COG1025 # Protein_GI_number: 15832932 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Escherichia coli O157:H7 # 1 959 1 959 962 1582 82.0 0 MPRSLWFKVFVVLAALWAPFSQADTGWQPIQETIRKSEKDTRQYQAIRLDNDMVVLLVSD PQAVKSLSALVVPVGSLQDPADHQGLAHFLEHMTLMGSQKYPQPDSLAEFLKLHGGSHNA STAPYRTAFYLEVENDALDGAVDRLADAIAAPLLDKKYADRERNAVNAELTMARTRDGMR MAQVSAETINPAHPAAHFSGGNLETLSDKPGSPVLDALHTFRDSWYSANLMKAVIYSNKP LPALARMAADTFGRVPNRQISRPEITVPVVTDAQKGIIIHYVPAMPRKVLRVEFRIDNNS DRFRSKTDELVTYLIGNRSPGTLSDWLQKQGLAEGIRADSDPVVNGNSGVLAISATLTDK GLAHRDEVTAAIFSYLDLLRTQGIDKRYFDELAHVLALDFRYPSINRDMDYVEWLADTMI RVPVEHALDVVNIADQYDPQAIKDRLAMMTPQNARIWYISPQEPHNKTAYFVDAPYQVDK ISEQTFADWQQKSQAIQLQLPVLNPYIPDDFTLIKSDKAWPHPQLILDEPTLRVVYAPSQ YFASEPKADISLVLRNPQAMDSARRQVMFALNDYLAGIALDQLSNQAAVGGISFSTGANN GLMVNANGYTQHLPALFSDLLQGYFSYTPTEEQLEQAKSWYAQMMDSAEKGKAYDQAIMP IQMVSQVPYFQREVRRALLPSITLKEVLDYRANLKTKGRPELMVIGNMTADAATTLARQI QQQLGADGNEWCRNKDVVVNRQQLAIFNKAGNSTDSALAAVFAPPNVDEFSSTAASTLLG QIIQPWFYNQLRTEEQLGYAVFAFPMNVGRQWGMGFLLQSSDKQPAFLWQRFQAFFPTAE AKLRAMKPEEFAQLQQAVISQMLQAPQTLGDEASKLSKDFDRGNMRFDSRDKVVAQIKLL TPQKLADFFHQTVVDPQGMTILSQISGSQNGKADYAQPKGGKVWENVSALQQSLPLMREN E >gi|289775900|gb|GG745510.1| GENE 296 314010 - 317387 4145 1125 aa, chain - ## HITS:1 COG:recC KEGG:ns NR:ns ## COG: recC COG1330 # Protein_GI_number: 16130726 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Escherichia coli K12 # 1 1122 1 1122 1122 1768 78.0 0 MLRVYHSNRLDVLEALMEFIVERQRLDDPFQAEMVLVQSTGMAQWLQMTLASRFGIAANI EFPLPASFIWDMFVRVLKDIPGESAFSKQSMSWKLMTLLPQHLEEDDFILLRQYLSDDGD KRKLFQLAARVADLYDQYLVYRPEWLMRWEAGQRVEGLGDAQQWQAPLWQALVRYTAELG QPQWHRANLYQRFISTLEKADEPPAGLPSRVFICGISALPPVYLQALQALGKHVDVYVLF TNPCRYYWGDIKDPAFLAKLLSRQRRHHREARALPLFRDTEQAPGLFNDAGEQDVGNPLL ASWGKLGRDYIYLLAGLERYEELDAFVDIAPDNLLHNLQSDILELRNAAVAGQSAEAFAH SRDKRPLALDDRSLSIHVCHSPQREVEVLHDRLLAMLEADPTLTPRDIIVMVADIDSYSP YIQAVFGAASGDRWLPWAISDRRARESHPVLQAFITLLSLPDSRFASEDVLALLDVPVLA ARFNITEEGLRYLRQWVNESGVRWGMDDDNVRELDLPATGQHTWRFGLTRMLLGYAMDSR EGEWQSVLPYDESSGLIAELVGNLASLLMQLNLWRRGLAQQRPLAEWLPVCRDLLNDFFL PDSETEAALALIEQQWLAVIDSGLEAQYGDQVPLTLLRDELAQRLDQQRISQRFLAGPVN ICTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL MSAEQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHCLAGDEELDCDASEARVKAHI THLHTRMPFDVANFQEDENKSYAREWLAAAGQQGEAHSDFIQPLTAPPIDSLPFEQLLRF WQHPVRAFFQQRLRVNFRAEEDDIPDDEPFTLEGLSRYQLNQQLLNTLIEEQDVSAMFRR FRAAGELPYGAFGELVWETQRLEMQALAERVMAERQQAQSMEIDLQCGGVNLTGWLQQVQ PDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLFVRKEGEWRFPALAPAEAQAYL NALVDGYLLGMSQPLLLLPESGGAWLKACYDAEKDVILMDEETQQKARSKFLQTYEGNMV VSGEGADIWYQRLWRSLEPAHYEEIIAQTQRYLLPLYRYHQSTQI >gi|289775900|gb|GG745510.1| GENE 297 317400 - 317723 325 107 aa, chain - ## HITS:1 COG:ppdC KEGG:ns NR:ns ## COG: ppdC COG4967 # Protein_GI_number: 16130727 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Escherichia coli K12 # 1 107 1 107 107 99 54.0 1e-21 MSNALKHQRGFSLPETVLAMALMVLTVTALGGYQRGMAQGIVQLNQTRQLWRDAWRYSQL SAPPSPARGQVSRMQTSTQRCVSITVTISMPVAKRVQMTRLHCPVSQ >gi|289775900|gb|GG745510.1| GENE 298 317708 - 318115 463 135 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0837 NR:ns ## KEGG: Kvar_0837 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 135 1 135 135 192 99.0 5e-48 MIRQRGMSSLLMVLLLLTLGSLLLEGLNLQQRALLAQTASETQAIRDTAIAHSALQWGKQ QAWSAQLPLACREQTPQGWRACLRIFGDGSLLLSSASGEVQVWQSGEVRGGQVRFSAHGW SDFCPLREVSLCQMP >gi|289775900|gb|GG745510.1| GENE 299 318112 - 318669 516 185 aa, chain - ## HITS:1 COG:STM2999 KEGG:ns NR:ns ## COG: STM2999 COG4795 # Protein_GI_number: 16766301 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Salmonella typhimurium LT2 # 1 185 3 187 187 212 52.0 3e-55 MNSRGFSLAEALIAMAIGSLLLMGTCRFLPALQRHILRQGEQLALENELWQRVHAVGKHL QRAGYCRGACGGAGLELAADGECLIVRWDANSNGRWETSPAAAAESTGFRLRDGALETLR GASDCRGGGWEKITNPAAIVVTRFSVQRQVTSGFAPELSVTLAARSAQQRGLTSEVEQRV TGYNL >gi|289775900|gb|GG745510.1| GENE 300 318666 - 319217 335 183 aa, chain - ## HITS:1 COG:ppdA KEGG:ns NR:ns ## COG: ppdA COG2165 # Protein_GI_number: 16130730 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 29 182 1 155 156 157 48.0 7e-39 MQTFFAYLAGKAIFRRRARVNRRGILDAMNREHGYTLMETLVTLTLMMILSVGGLYGWQR WQQQQQLWQTALQVRDFLLFLRDDANAYNRDRVLRVGQDEVGWCLSAEGEGPECASGTSF TLRPRWPGITLAGVTPGLGFYGLRSTAWAGNLRLQSAAGSWSIVISHWGRIRLCRSDSAG GCQ >gi|289775900|gb|GG745510.1| GENE 301 319404 - 320198 1111 264 aa, chain - ## HITS:1 COG:ECs3684 KEGG:ns NR:ns ## COG: ECs3684 COG0207 # Protein_GI_number: 15832938 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 542 93.0 1e-154 MKQYLDLMQKVLTEGTPKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL WFLQGDTNIAYLHDNNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQITTVMNQLK NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS YALLVHMVAQQCDLQVGDFVWTGGDTHLYSNHLEQTNLQLSREPRPLPKLVIKRKPASIF DYRFEDFEIEGYDPHPGIKAPVAI >gi|289775900|gb|GG745510.1| GENE 302 320205 - 321080 1297 291 aa, chain - ## HITS:1 COG:STM3002 KEGG:ns NR:ns ## COG: STM3002 COG0682 # Protein_GI_number: 16766304 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Salmonella typhimurium LT2 # 1 291 1 291 291 500 88.0 1e-141 MNSGYLHFPEFDPVIFSLGPVSLHWYGLMYLVGFVFAMWLATRRANRPGSGWTKNEVENL LYAGFLGVFLGGRIGYVLFYNLPVFLADPLYLFRVWDGGMSFHGGLIGVILVMIIFARRT KRTFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPSFHYTMIFPGSRAEDLALLPTH PEWQSLFDTYGALPRHASQLYELALEGVVLFLILNLFIRKPRPTGSVSGLFLIGYGLFRI IVEFFRQPDAQFTGGWVQYISMGQILSIPMVLAGIIMMVWAYRHRPQQQNS >gi|289775900|gb|GG745510.1| GENE 303 321326 - 323572 3063 748 aa, chain - ## HITS:1 COG:STM3003 KEGG:ns NR:ns ## COG: STM3003 COG3605 # Protein_GI_number: 16766305 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Salmonella typhimurium LT2 # 1 747 1 747 748 1314 90.0 0 MLTRLREIVEKVASAPRLNEALDILVTDVCQAMETEVCSVYLADNDRRCYYLMATRGLKK PRGRTVALAFDEGLVGLVGRLAEPINLADAQKHPSFKYIPAVKEDRFRAFLGVPIIQRRQ LLGVLVVQQRELRQFDESEESFLVTLATQMAAILSQSQLNALFGQYRQTRIRALPASSGV AIAEGWMDVSLPLMEQVYEASTLDTASERERLTGALEEAANEFRRYSKRYAAGAQKETAA IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALSDGYLKERAGDLRT LGQRLLFHLDDSIQGPNTWPARIILVADELSATTLAEVPQDRLVGVVVRDGAANSHAAIM VRALGIPTVMGADIQPSLLHGHTLIVDGYRGELLVDPEPVLLQEYQRLISEENELSRLAE DDLQRASELKSGERVKVMLNAGLSPEHEEKLGSFVDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNSKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR AMLRANAATGNLSILLPMVTSLEEVDEARRLIDRASREVEEMIGYAIPRPRLGVMLEVPS MVFMLPQLASRIDFISVGTNDLTQYLLAVDRNNTRVASMYDSLHPAVLRALAMIAHDAER FGIDLRLCGEMAGDPMCVTILIGLGYRHLSMNGRSVARVKYLLRRIDIEEAQELSRRSLD AQMTAEVRHQVAAFMERRGLGGLIRGGR >gi|289775900|gb|GG745510.1| GENE 304 323585 - 324115 265 176 aa, chain - ## HITS:1 COG:ECs3687 KEGG:ns NR:ns ## COG: ECs3687 COG0494 # Protein_GI_number: 15832941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 324 93.0 6e-89 MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLIGNDADINMQTSSTPE FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVTMSLAESAPKPQSAPAYRRKRG >gi|289775900|gb|GG745510.1| GENE 305 324798 - 325493 873 231 aa, chain + ## HITS:1 COG:STM3005 KEGG:ns NR:ns ## COG: STM3005 COG3066 # Protein_GI_number: 16766307 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Salmonella typhimurium LT2 # 1 230 1 230 231 375 82.0 1e-104 MPTIAPLSSPPQSQEQLLAQARQLAGYSLGELAALAGIPIPRDLKRDKGWTGILLELWLG ASAGSKPEQDFAALGVELKTIPIDSRGRPLETTFVCVAPLTGNSGVTWESSHVRHKLQRV LWIPVEGERTIPLAARRVGAPLLWSPDEDEERQLRMDWEELMDLIVLGEVERITARHGEV LQLRPKAANSKALTEAIGAHGETILTLPRGFYLKKNFTAALLARHFLLQHD >gi|289775900|gb|GG745510.1| GENE 306 325557 - 326270 1017 237 aa, chain + ## HITS:1 COG:ECs3689 KEGG:ns NR:ns ## COG: ECs3689 COG0861 # Protein_GI_number: 15832943 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 363 93.0 1e-100 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRIGLMGAMVMR LALLASIAWVVKLTNPLFTVLGQEISFRDLILLLGGLFLIWKASKEIHESIEGEEEGLKT NVHSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGDFVD RHPSVKMLALSFLILVGFTLMLESFDVHVPKGYIYFAMFFSIAVESLNLLRNKKNPL >gi|289775900|gb|GG745510.1| GENE 307 326394 - 326612 273 72 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0828 NR:ns ## KEGG: Kvar_0828 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 72 1 72 72 128 100.0 9e-29 MKKWAVLISAVGLAFSVSGCSSDYVMATKDGRMILTDGKPTVDDDTGLISYEDQQGNKMQ INRDDVSQIIKR >gi|289775900|gb|GG745510.1| GENE 308 326833 - 327873 1489 346 aa, chain + ## HITS:1 COG:tas KEGG:ns NR:ns ## COG: tas COG0667 # Protein_GI_number: 16130738 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 645 90.0 0 MQYHRIPHSSLEISTLGLGTMTFGEQNSEADAHQQLDYAVANGINLIDVAEMYPVPPRPE TQGLTETYVGNWLAKRGNREKLVLASKVSGPARNNDSSIRPNHVLDRKNIREALHASLKR LQTDYLDLYQVHWPQRPTNCFGKLGYTWADAAPAVTLLDTLEALTEFQRAGKIRYIGVSN ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQFEGVELLAYSCLAFGT LTGKYLNGAKPAGARNTLFSRFTRYSSEQSQKAVAAYVDIAKRHGLDPAQMALAFVRRQP FVASTLLGATTMAQLQANVESLQLELSEEVLAEIEAVHQVYTYPAP >gi|289775900|gb|GG745510.1| GENE 309 327977 - 329170 1655 397 aa, chain - ## HITS:1 COG:ygeD KEGG:ns NR:ns ## COG: ygeD COG0477 # Protein_GI_number: 16130739 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 396 1 396 397 548 81.0 1e-156 MSESVHTNPSLYSKGMLAVICAQFLSAFGDNALLFATLALMKQLYYPEWSQPVLQMLFVG AYILFAPFVGQFADSFAKGRVMMVANGLKLLGAGCICFGVNPFIGYTLVGIGAAAYSPAK YGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILADWHVLAALIVCALVYGGAVVA NLWIPRLPAARPGQSWRFKPMTHSFFSACRTLWRNGETRFSLMGTSLFWGAGVTLRFLLV IWVPVALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLETVSRCMPAGILIGIAVMAFA VQQSLLPAFGLLLLLGVFGGFFIVPLNALLQERGKHSVGAGNAIAVQNLGENVAMLLMLG LYSLAVSVGVPPVAVGIGFGAVFAVAIAALWVWGRRK >gi|289775900|gb|GG745510.1| GENE 310 329163 - 331322 2849 719 aa, chain - ## HITS:1 COG:ECs3693_2 KEGG:ns NR:ns ## COG: ECs3693_2 COG0318 # Protein_GI_number: 15832947 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 196 719 1 524 524 930 86.0 0 MLLGFFRLLFKGLYRVRLTGDTQALYQQKVLITPNHVSFLDGILLALFLPVRPVFAVYTS ISQRWFMRALTPIIDFVPLDPTKPMSIKHLVRLIEQGRPVVIFPEGRISVSGSLMKIYDG AAFVAAKSQATIVPLRIEGAELTPFSRLKGLVKRRLFPRIQLHLLPPTHLPMPEAPRARD RRKIAGEMLHQIMMEARMAVRPRETLYESLLAAQDRFGARKPCVEDINFQPDTYRKLLTK TLFVARILEKYSQRGEKIGLMLPNAGISAAVIFGAIARGRIPAMMNYTAGVKGLSSAIAA AEINTIFTSRTFLDKGKLWHLPEQLTQVRWVFLEDLKGDITLADKLWIFGHLLAPRLAQV KQQPEDAAMILFTSGSEGNPKGVVHSHKSLLANVEQIKTIADFTANDRFMSALPLFHSFG LTVGLLTPLFTGAEVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFLANYARFANPYDFYR LRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKVGTVGRILPGM DARLLAMPGIEQGGRLQLKGPNIMKGYLRVENPGVLETPAAENQHGEKEAGWYDTGDIVT FDEQGYVRIQGRAKRFAKIAGEMISLEMVEQVALGASPDKMHATAIKQDASKGEALVLFT TDNELSREALLRYARQHGVPELAVPRDIRWLKQLPVLGSGKPDYVTLKNMVDEAETTHE >gi|289775900|gb|GG745510.1| GENE 311 331943 - 332959 1295 338 aa, chain + ## HITS:1 COG:galR KEGG:ns NR:ns ## COG: galR COG1609 # Protein_GI_number: 16130741 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 332 1 332 343 574 89.0 1e-164 MATIKDVARLAGVSVATVSRVINNSPKASEASRQSVGAAMETLNYHPNANARALAQQSTE TVGLVVGDVSDPFFGAMVKAVEQVAYRTGNFLLIGNGYHNVQKERQAIEQLIRHRCAALV VHAKMIPDEELAGLMKQIPGMVLINRILPGYETRCVALDDRYGAWLATRHLIQQGHTRIG YLCSNHHISDAEDRLQGYYAALEESGLPCNDRLVAFAEPDESGGELAMTELLGRGRHFSA VACYNDSMAAGAMGVLNDNGIDVPREISLIGFDDVLISRYVRPRLTTVRYPIVTMATQAA ELALALAEYRPAPEITHLFSPTLVRRHSVVAPLEGDKS >gi|289775900|gb|GG745510.1| GENE 312 332920 - 333399 620 159 aa, chain - ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 3 135 4 136 152 72 32.0 4e-13 MTILPLYAAPQYAPQVTDWLWHAFGGETLPREFFASIVQHSQTAEALPLTFIAVEGEQLL GTIGLWRCDLISRQDLFPWLAALYVARAARGQGLAGKLQRHVIDYARRAGFRELYLYSAC RDFYERFGWRYIGEGLDYPATAVHLYRYDLSPSSGATTE >gi|289775900|gb|GG745510.1| GENE 313 333396 - 334169 1130 257 aa, chain - ## HITS:1 COG:YPO1279 KEGG:ns NR:ns ## COG: YPO1279 COG2186 # Protein_GI_number: 16121564 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 13 250 23 261 266 236 52.0 4e-62 MEKAIIPPEKKPYQEIGDDLRAQIAQGRYPVGSRLPPERHIAETYGVSRTIVREALLMLE LQGTVDIRQGSGVYVMRIPHENDSEEEQLLSSDVGPFEILQARQLLESNIAAFAAKMATR ADIDNLKRIVEQEQRAIALNDTAQDNARLFHLVLAGATQNQMLLATVERIWLQMDSSPLW QQFNVHIASRAWRLKWLGDRQTLLAALRRRDVMGAWQAMWQHLENVKNSLLELSDEDAPD FDGYLFDSVPIFQGKLV >gi|289775900|gb|GG745510.1| GENE 314 334237 - 335664 1870 475 aa, chain - ## HITS:1 COG:SPy1599 KEGG:ns NR:ns ## COG: SPy1599 COG2723 # Protein_GI_number: 15675482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 6 474 2 471 480 371 40.0 1e-102 MTTVRMTIPDDFILGAAASAWQTEGWSGKKPGQDSWPDLWYKNDRHVWHNGYGPAVATDF INRFQEDVQLMKLAGLTHYRTSINWSRFLTDYENVTVDEEYAAYYDQLFDALLANGITPM ICLEHYELPGYLLEKYGGWGSKTVVELFVRYAEQVFARYHPKVTRWFTFNEPIVVQTRVY LDALRWPYEQNTSTWMQWNYHKVLATASVVKRFRELGYPGTVGCILNPEVTYPRSRAPHD LRAAEIYDLFYNRMFLDPLVHGVWPPELLALLEQHQVTWDASEEDLAIIREHTVDELGIN LYYPHRVKAPSRAWHPHTPFHPAWYYEPFELPGRRMNASRGWEIYPQIIFDMAMRIKNDY RNIPWFVAESGMGVENEDQFRNREGTIDDSYRIRFISEHLWHTLRAREAGANCQGYMLWA FTDNVSPMNAFKNRYGLIEIDLQNHRARRPKASAHWFRQLGERRELVLDIDDEYR >gi|289775900|gb|GG745510.1| GENE 315 335672 - 337009 1969 445 aa, chain - ## HITS:1 COG:lin0033 KEGG:ns NR:ns ## COG: lin0033 COG1455 # Protein_GI_number: 16799112 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 2 438 6 441 452 271 35.0 2e-72 MALQDKLIDALGRFATTFNSYRYIMAIKSAFITLMPVIIVGAFSVLISNMVLDPKNGLAS FSSLSFLAALKPITSALNYATLNFLNIGAVFLIGIELGRINGIKSLFPGLLAVICFICVT PTTVEMMVDGQMHVVKDVLLRQFSDTRSLFLGMFIAILSVEIYCWLEGRKGLKIKMPDTV PPNVSASFSALIPAIITTTAIATLGFLFHQLTGMYLYDAVYQVVQQPLERVVQSLPGILL LMFVAQLFWVIGIHGNQMIKPIREPLLLGAITVNMSAFEQGKEVPNIITMPFWDVYMSIG GSGLTIGLLIAVMIATKRKEMKEIAKLSIGPGLFNINEPVIFGMPIMLNPILAIPFIITP LVTGSIGYFATLTGFAGKAVVMVPWTTPPLINAWLSTAGSMGAVVTQLICIVTAVLIYLP FVKIASRRADAAQRQADNQQTANPV >gi|289775900|gb|GG745510.1| GENE 316 337300 - 338310 1008 336 aa, chain + ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 336 2 337 340 542 77.0 1e-154 MATMLDVSIRAGVSKATVSRVLNGTGQVKESTRQLVFKAMEELGYRPNFLARSLANQTSN SIGLVVSTFDGFYFGRLLQQASRQTEAWGKQLIVTDGHDTPEREEEAVQMLADRQCDAII LYTRHMSEKAIMSLINSIAMPLVVINRDVAQARERCVFFEQQEAAFQAVEYLITQGHRDI ACMTVPMHTPTGQARLQGYRNALIKHGIEWDPSRVKYGDSTMTRGYELCRELLDEKARFS ALFSCNDDMALGASKALHQAGLRIPQDVSLFGFDDAPSAKWLEPGLSTVYLPIDNMITTA IDQAIKLANQQPIETIPPFTGTLVLRESVTTGPFFK >gi|289775900|gb|GG745510.1| GENE 317 338303 - 339565 1620 420 aa, chain - ## HITS:1 COG:lysA KEGG:ns NR:ns ## COG: lysA COG0019 # Protein_GI_number: 16130742 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Escherichia coli K12 # 1 411 1 411 420 750 87.0 0 MPHSLYATDTDLTADNLLRLPAEFGCPVWVYDAQIIRRQIAQLSQFDVVRFAQKACSNIH ILRLMREQGVKVDSVSLGEIERALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVN AGSIDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRR YQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAID TAHYYGLWNRAREQIAAHLGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDA GFNDLMRPAMYGSYHHITALAADGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRL LPAVVPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLALELI >gi|289775900|gb|GG745510.1| GENE 318 339745 - 340629 1124 294 aa, chain + ## HITS:1 COG:lysR KEGG:ns NR:ns ## COG: lysR COG0583 # Protein_GI_number: 16130743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 294 15 308 311 469 85.0 1e-132 MMTTGNLTEAARMLHTSQPTVSRELARFEKVLGLKLFERTRGRLQPTVQGLRLFEEVQRS WYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPLLLPPFLARYPEVSLQIVPQESPL LEEWLSAQRHDLGLTETLHTPAGTERTPLLTLNEVCVLPAGHPLAVQTTLTPADFQGENY ISLSRTDSYRQLLDALFLEHQVKRRMVVETHSAASICAMVRAGAGISVVNPLTALDYADS GVVVRRFSVEVPFTVSLIRPLHRPRSALVDAFVAHLQESLPQILTPLASVLQRA >gi|289775900|gb|GG745510.1| GENE 319 340595 - 341308 944 237 aa, chain - ## HITS:1 COG:ECs3697 KEGG:ns NR:ns ## COG: ECs3697 COG1794 # Protein_GI_number: 15832951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 380 81.0 1e-105 MKTIGLLGGMSWESTIPYYRLINEGVKARLGGLHSASLVLHSVDFHDIEACQSAGDWDRA GEILAEAAVGLQQAGAEGIVLCTNTMHKVADAIAARCQVPFLHIADATGRAIAAKGQRRV ALLGTRYTMEQTFYRGRLLEQFAIETLIPEADDRARINQIIFDELCLGTFSEASRDYYLQ VIAALAEQGAEGVIFGCTEIGLLVPAELSPLPVFDTAAIHAEDAVNFMLSAGPTPAA >gi|289775900|gb|GG745510.1| GENE 320 341448 - 341774 513 108 aa, chain + ## HITS:1 COG:CAC3376 KEGG:ns NR:ns ## COG: CAC3376 COG1917 # Protein_GI_number: 15896618 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Clostridium acetobutylicum # 2 106 5 109 114 127 57.0 4e-30 MFIFHKDTTLEDLGNGVTRRILAHDGKMMAVEVNFAAGAVGPIHNHPHEQLTYVLSGEFE FTIGEETRVVSAGDTLYKQPGIMHGCVCLQPGTLLDTFTPVREDFLSR >gi|289775900|gb|GG745510.1| GENE 321 342228 - 343118 1299 296 aa, chain + ## HITS:1 COG:YPO1722 KEGG:ns NR:ns ## COG: YPO1722 COG1175 # Protein_GI_number: 16121982 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 1 295 1 295 296 481 94.0 1e-136 MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDS LFWKSMGVTFAYVFLTIPLKLAFALGIAFMLNFKLRGIGFFRTAYYIPSILGSSVAIAVL WRALFAIDGLLNSFLAVFGIDAVNWLGEPSLALMSVTLLRVWQFGSAMVIFLAALQNVPQ SQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG >gi|289775900|gb|GG745510.1| GENE 322 343111 - 344013 1277 300 aa, chain + ## HITS:1 COG:YPO1721 KEGG:ns NR:ns ## COG: YPO1721 COG0395 # Protein_GI_number: 16121981 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 1 300 1 306 306 503 88.0 1e-142 MADIQQMAPVMSNADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHE IFTTLGLWPAHATWDGFINGWKTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFAR FEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSYLPLYLPLAFATQGFFVFML IQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG >gi|289775900|gb|GG745510.1| GENE 323 344026 - 345153 1555 375 aa, chain + ## HITS:1 COG:YPO1720 KEGG:ns NR:ns ## COG: YPO1720 COG3839 # Protein_GI_number: 16121980 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 375 1 375 375 622 82.0 1e-178 MAEVIFNKLEKVYSNGFKAVHGIDLKIADGEFMVIVGPSGCAKSTTLRMLAGLETISGGE VRIGDKIVNNLAPKSRGIAMVFQNYALYPHMTVRENLAFGLKLSKLPKAQIDRQVEEAAK ILELEELLDRLPRQLSGGQAQRVAVGRAIVKKPDVFLFDEPLSNLDAKLRASMRIRISDL HKQLKKSGKPATTVYVTHDQTEAMTMGDRICVMKLGHIMQVDTPDNLYHQPKNMFVAGFI GAPEMNIRPSQLVEHDGRLHLTLGDQRLPLNDLLQSKVETHKNQQVFFGVRPEFVSLSDE PFAEGSCTGEMVRVENMGHEFFVYLKVADYELTARVPSDEAKPMLEKGLHRKVYFKFDLN KCHIFDAKTEQNLSL >gi|289775900|gb|GG745510.1| GENE 324 345170 - 346456 1708 428 aa, chain + ## HITS:1 COG:YPO1719 KEGG:ns NR:ns ## COG: YPO1719 COG1653 # Protein_GI_number: 16121979 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 428 1 430 430 656 72.0 0 MKNVLLSAVISATLGLTALPSMAKDVDLRMSWWGGNGRHQVTLKALEEFHKQHPDINVKA EYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKNGEGFYDLNTLKDEIDLSQFDAK ELQSTTVNGKLNGIPISVTARVFYFNDEAWKKAGIAFPKTWDELMAAGKTFESKLGKQYY PVVLEHQDVLALLNSYMVQKYNQPAIDEKGRKFSYSKAQWADFFGMYKKLIDNHVMPDTR YYASFGKSNMYEMKPWIQGEWGGTYMWNSTINKYSDNLKPPAKLVLGEYPMLPGATDAGL FFKPAQMLSIGKSTKNPQAAAKVINFLLNSKEGVDILGLERGVPLSKAAVNYLTEDGIIK ADDPAVSGLKLAQSLPTTLPVSPYFDDPQIVAQFGTTLQYIDYGKKSVEEAAEDFQRQTD RILRRAMR >gi|289775900|gb|GG745510.1| GENE 325 346516 - 347859 1361 447 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0810 NR:ns ## KEGG: Kvar_0810 # Name: not_defined # Def: glycoporin RfaY # Organism: K.variicola # Pathway: not_defined # 1 447 1 447 447 866 99.0 0 MNKIWVGCFLTSLYLPSVMAQAPLSLEERLAQMEQRLKATEARAASAEAEIKTLKGQQQA TTVARAAPATPRLQLNDNGELKFYGDVEFNLDGASRTGSLTSVKTSANKSWAPGDKERWD INGRILLGIDGRRNGADGKYAGFSVQPLADMDGKMNLDDAVFFFGQQDDWKIKIGRFEAW DMFPLNQDTFIEYSGNTANDLYSDGYGYIYMMKEGRGRSSSGGNLLFSKTVDNWYFEVNT LVEDGSSLFVDHNYHGNALENRKNVVYVRPVAVWQSGAWSAAAAIESNLVNNAYGYQNQS GRWVDQSNRTGYGLTMSWNTLKSDPQDGAVVNLSTALLDAADETDFSAGINALWHRVELG YIYAHNKIDQFNMAGVTSECDGDCAILAPGRYDIHTLHTSWQLPNIMAMPNFNIYLGAYA SWLDSTAAKSGNPDERYGARVRFKYFF >gi|289775900|gb|GG745510.1| GENE 326 347981 - 349414 1761 477 aa, chain - ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 23 476 24 476 477 532 56.0 1e-151 MTYTISRAEQVLQTQRQALNLRWYPHYHLAARAGWINDPNGLVWFDGWYHAFYQHHPYST QWGPMHWGHARSKDLVHWEHLPVALAPEGPEDKDGCFSGSAVVDGDTLALIYTGHKFHGD PGDEANLYQVQCLATSRDGIHFERQGMVVDTPPGMHHFRDPKVWREGDSWYMIVGAREGD TGQVRLYRSTDLRQWQDAGVLDEAESTMGYMWECPDFFTLNGKRVLMFSPQGMQAEGFRN RNLFQSGYLIGEWQPGQRFIRHGEFREMDHGHDFYAPQSFATPDGRRIVIGWLDMWESPL PEQQDGWAGMLSLPRELSLSADNRLQMRPAKEVESLRGAWFPWPVSTLNNQQTTMVDNCE AMEVHLRWDCARSSAEQYGLRFGDGLRIYVDAQQQRLVVERYYPQFGLCGTRSVPLTAGA DLNLRIFFDSSSVEVFVNDGEACLSSRIYPQVPCRELALFAWSGSAALTEAGAWQLE >gi|289775900|gb|GG745510.1| GENE 327 349434 - 350672 1761 412 aa, chain - ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 412 12 415 415 265 38.0 1e-70 MKAHHSHSYPLLSALLFFFFVTWSSSGSLLSIWLHQEVGLKAGDTGIIYAVLSVSALFAQ VCYGFIQDKLGLRKHLLWYITALLLLSGPAYLLFGHLLKINVLLGSIFGGIYIGLTFNGG IGVLESYTERVARQSQFEFGRARMWGSLGWAVATFFAGLLFNINPQLNFLVASCSGLVFF ILLARLRVSSAPHAMQEAVSGGKVTLEDALRLLTLPRFWALVFFVIGTCIYGVYDQQFPV YFSSQFATLQEGNEMYGYLNSFQVFLEAAGMFCAPWLVNRIGAKNGLIFAGMVMAMRMVA SGLVEGPLLISITKLLHAVELPILLVAIFKYNSINFDKRLSSTLYLVGFACTSSIIASVL SPLAGYSYEKYGFAQSYLIMGLLVFCTTFISIFLLRSGKSSADPLVSQPTAI >gi|289775900|gb|GG745510.1| GENE 328 350917 - 351912 1366 331 aa, chain + ## HITS:1 COG:YPO1642 KEGG:ns NR:ns ## COG: YPO1642 COG1609 # Protein_GI_number: 16121910 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 330 1 330 347 369 55.0 1e-102 MASLKDVAKLANVSLMTVSRALNTPERLKPETLARVQAAIAETNYVPDLSAKKIRGARAT PSTIGVLALDTVTTPFSVEITLSIEETARAHGWNSFVVNMFSDDSPEAVVDLLLSHRPDG IIFTTMGLRQVPLPDKLLTLPCVLANCESLSQPVASYIPDDEQGQYDAVKALLAAGYRHP LCLHLPASQLATIRRRQGLERACREAGIEPDHLIHSYMGQGDEHYHDIPAVVLAHIREGK PGFDSVICGNDRIAFMVYQTLLGQGLRIPQDVAVVGYDNMVGIGDLFLPPLSTVQLPHYD IGRLSALHIIHGDNHRETRKVASPWLPRASH >gi|289775900|gb|GG745510.1| GENE 329 351909 - 353330 2134 473 aa, chain - ## HITS:1 COG:STM3016 KEGG:ns NR:ns ## COG: STM3016 COG0477 # Protein_GI_number: 16766318 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 471 1 471 472 830 94.0 0 MTSISNDSALTPRTQRDTRRMNWFVSIAAAVAGLLFGLDIGVISGALPFITDHFTLSSQL QEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAVLFVAGSIGSAFAASVEVLLIARV VLGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAM LGVLALPAVILIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKARDELNEIRESLK LKQGGWALFKVNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIAT LVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWL SVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLD AIGAAGTFWLYTVLNVAFIGVTFWLIPETKNVTLEHIERNLMAGEKLRNIGNR >gi|289775900|gb|GG745510.1| GENE 330 353628 - 354389 1064 253 aa, chain - ## HITS:1 COG:kduD KEGG:ns NR:ns ## COG: kduD COG1028 # Protein_GI_number: 16130746 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 253 1 253 253 469 92.0 1e-132 MILDAFSLQGKVAVVSGCDTGLGQGMALGLAEAGCDIVGINIVEPVETIERVTALGRRFL SLTADLRQIDGIPQLLERAVAEFGHIDILVNNAGLIRREDALAFSEKDWDDVMNLNIKSV FFMSQAAAKHFIAQGSGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLLANEWAKHN INVNAIAPGYMATNNTQQLRADEQRSSEILDRIPAGRWGLPADLMGPVVFLASSASDYIN GYTVAVDGGWLAR >gi|289775900|gb|GG745510.1| GENE 331 354877 - 356052 1584 391 aa, chain + ## HITS:1 COG:YPO1713 KEGG:ns NR:ns ## COG: YPO1713 COG0823 # Protein_GI_number: 16121973 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Yersinia pestis # 1 384 1 384 388 570 68.0 1e-162 MAKGMRVKLNYQVSHDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW NYYLLNIASAEAIQLTEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLTTLVEREVYRV SDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLNDWQIFHDFFHKGPHCRLLRVDLHSGES QVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKTHAPGESC THEFWVPDGSALIYVSYLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNFDGTLLVGD GSGTPVDVKDTGGYSIDNDPYLYVFNVAQKRYFRVARHDTSWATVANSRQVTHPHPSFTP DDSAILFSSDKDGKPAIYIAKLPEHPPMLSA >gi|289775900|gb|GG745510.1| GENE 332 356187 - 356882 890 231 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0803 NR:ns ## KEGG: Kvar_0803 # Name: not_defined # Def: oligogalacturonate-specific porin # Organism: K.variicola # Pathway: not_defined # 1 231 1 231 231 437 99.0 1e-121 MLKRSLVLAALCGMSFAATAVTIDLRHEFIDGGKSDKSNADRVSVSHRFANGLGFTVEAK WRSGGDNGSQPYSDVVGNGHEDTISWRWKATSNFFLTPGFTIESNDSRSIYKPHLHVQYS FDNGFYVAARYRYEYTRYPNNAGKEDDKVNRGDAWAGFALGDWRTELNYVYARSSEGVSR NDNKPYSQEYNVKVAYKLDNNWSPYGEIGNVGVNDRSDRQTRFRVGVAYSF >gi|289775900|gb|GG745510.1| GENE 333 357132 - 358310 1515 392 aa, chain - ## HITS:1 COG:yqeF KEGG:ns NR:ns ## COG: yqeF COG0183 # Protein_GI_number: 16130748 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 391 2 392 394 640 86.0 0 MKDVVIVGALRTPIGCFQGALSRHSAVELGSVVLKALVEQTGIDPQSVDEVILGQVLTAG TGQNPARQSAIRGGLPNTVSAITINDVCGSGLKALHLATQAIQCGEADVVIAGGQENMSR APHVLTDSRTGAQLGNSQLIDSLVHDGLWDAFNDYHMGVTAENLAREYGISRELQDAWAL SSQHKARKAIDSGRFRDEIVPVITEHNGAARTVDTDEQPRVDASAEGLASLQPTFDRLGS VTAGNASSINDGAAAVMMMSEAKALELGLPILARIRAFASVGVDPALMGIAPVHATRRCL ERAGWRLDDVDLIEANEAFAAQAISVGRVLEWDERRVNVNGGAIALGHPIGASGCRILVS LVHEMIKRDARKGLATLCIGGGQGVALAVERA >gi|289775900|gb|GG745510.1| GENE 334 358429 - 359298 957 289 aa, chain - ## HITS:1 COG:STM3020 KEGG:ns NR:ns ## COG: STM3020 COG0583 # Protein_GI_number: 16766322 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 435 73.0 1e-122 MRYSPEALTAFVEAVDCGSFSAAARRLRKSQSTISTAIANLEADLGVTLFDRATRQPTLT PQGEQVLSYVKAILAASERLDELAVSLAGETEPRLTFVLSDTLHPDVLEDLLVQFDRRFP HTEFECLIGEDEDVIDLLQKARAQVGLIEARDRYPTDIGSTRLPLQTAMGIYVAPDHPLA AQGKVVWDELRSWRELRLSTFLASATEPAAGQVWSAPNYLLLLSMAVQGFGWCILPCALV AEFAPQGGLVALDIPGWPRAISVDLLWNKKAPPGAAGSWLREHLQRRER >gi|289775900|gb|GG745510.1| GENE 335 359401 - 359862 636 153 aa, chain + ## HITS:1 COG:STM3021 KEGG:ns NR:ns ## COG: STM3021 COG4125 # Protein_GI_number: 16766323 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 151 10 160 160 198 69.0 3e-51 MQQIPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNI IYNAMFDRLWPVSRFPRQLKVRALHALGFETGFIIIGVTMVAIVLGVSLLQAFMLEIGFM LFFLPYTMAFNWAWDTLRERVIRRRRPRQPARG >gi|289775900|gb|GG745510.1| GENE 336 359987 - 361216 1533 409 aa, chain + ## HITS:1 COG:STM3022 KEGG:ns NR:ns ## COG: STM3022 COG0814 # Protein_GI_number: 16766324 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 409 1 409 409 582 79.0 1e-166 MSKIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALSQ FILSANIAPGTGITGAVNHYYGKKIGNLITGLYFLAFFVVVLIYAVAITNSLAEQVAHRT PVTPTLRALLSLGVVLVLNLIFLMGRQVTIKVMGFLVFPLIACFLFLSLYLIRDWHPEHL TSQMQFSTHTLHQIWISIPVMVFAFSHTPIISTFAIDQQEKHGDLAMGKCKKIMKVAYTI ICASVLFFVFSCLLAIPATYIESARDQGVTILSALSMVPGAPGWLAVTGIIVAVVAMSKS FLGTYFGVIEGASEIVKSSLGLVGVRKSRAFNRAMSILLVSAFTFAVCFINPNAISMIYA ISGPLIAMILFIMPTLSTWLIPALKPYRSVGNAITLVVGLLCVSVMFFG >gi|289775900|gb|GG745510.1| GENE 337 361336 - 362214 982 292 aa, chain + ## HITS:1 COG:mlr2172 KEGG:ns NR:ns ## COG: mlr2172 COG0667 # Protein_GI_number: 13472014 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 1 287 1 287 293 388 69.0 1e-108 MSSVTLSGRGTLGDRQVYRLGYGAMQLAGPGVFGPPKDPEEAVRVLQAAVEAGVNHIDTS DFYGPHVTNQLIRKALHPYPDDLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRNLG LDVLEVVNLRSMLSPHGPVEGSLEAPLTTLLELKARGLIRHIGLSNVTAKQVADAQKMTP IVCVQNLYNIAHRADDALVDALAAQHITWVPFFPLGGFTPLQAQELNEVAASLEATPMQV ALAWLLQRSPNILLIPGTSSRTHLAENIAAAQLALPGDALRILDNIATRARP >gi|289775900|gb|GG745510.1| GENE 338 362597 - 363301 291 234 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0797 NR:ns ## KEGG: Kvar_0797 # Name: not_defined # Def: type IV pilus assembly PilZ # Organism: K.variicola # Pathway: not_defined # 1 234 1 234 234 434 100.0 1e-120 MTEGTIKTSKYEIIAIFREELRKRTEIEIFFNNTSIVTQLTRVDFAEFHIQTHRKIPPGH KIRFLLHSDSGKIEFNAPLTKHDNSGVDKGIRYAFSLPECLQVVQRRRDPRFRLRHEHDF YCRGRHKNGENYLFDIKDISDGGCALMTRTPNLKFLSHNALLKNAVLMLAEYGEITIDLV VKNVIVITLDDANEESESYYQISCQFKFRHLDDQRRIEKILLDLILEAKRKKRI >gi|289775900|gb|GG745510.1| GENE 339 363319 - 363891 276 190 aa, chain + ## HITS:1 COG:no KEGG:KPK_0838 NR:ns ## KEGG: KPK_0838 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 190 5 194 194 341 99.0 1e-92 MLYTNDNLIGHSIYHYLIDSHENITRLGYGDVIHEKHLPLAQTVIFNLINKDISAIRIVD LLNALRLSLQRCQQPVLVVKSDIVALCRELITIDNAMIISEKSPLSLFSSIVKRAEGASE LPPRRLRKQLSPRECQILELLIANNNNKRIAALLGIAHKTVHSHRIHIMQKLGIDNSRAM NQRIAALHQC >gi|289775900|gb|GG745510.1| GENE 340 364035 - 364790 608 251 aa, chain + ## HITS:1 COG:YPO3988 KEGG:ns NR:ns ## COG: YPO3988 COG2200 # Protein_GI_number: 16124115 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Yersinia pestis # 19 222 50 257 276 110 30.0 3e-24 MNTKITEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLTVSPEYFFRHATAAVR ERIFLEQLALIEKHKDWFLRNNISATINVDDHILNLLRHKEIKDKIAALACVHFEVTENA ENLLNNSLAAWQNPQDTSLWLDDFGSGYAGINAIRGYHFDYVKIDKDFFWHLMRKESGRQ LMDALVTFLSRNHHNVIIEGVESEDHKKWLQGMEWFAIQGHYWQEVSIEQLVADDITRIK KPGILRLFCIA >gi|289775900|gb|GG745510.1| GENE 341 364787 - 365422 582 211 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0794 NR:ns ## KEGG: Kvar_0794 # Name: not_defined # Def: fimbrial protein # Organism: K.variicola # Pathway: not_defined # 1 211 1 211 211 422 99.0 1e-117 MKGLPKHTIAWLIFCGSLAAPSAWGFETNYDRGRVEFAGRVTDISCSVALNGGQHAGNGN VWLAPVSLAEVHDRGAGAFMKPQPFTLALSNCQLRHDGGAASQDEVRRVSVRWIDGFLLT AVGNENAGYLANTLPDGAQNIYLALSTNDNNTLDKSNKIVPADPQQNQVHLQENAVSGGL FTYYVGYVSPTPKSATSGPITSWATWELVYN >gi|289775900|gb|GG745510.1| GENE 342 365436 - 366431 973 331 aa, chain - ## HITS:1 COG:XF0077 KEGG:ns NR:ns ## COG: XF0077 COG3539 # Protein_GI_number: 15836682 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 35 310 55 334 356 117 32.0 4e-26 MSLRKLLTLFIVLMALGTTSSWAVCTRLSSPTVMLDMVVGRVVVPPDLPVGSVILTRDWT MSAPGGASYRCTSGTNRFAAKIVAPGATDLGNKIYSTNVPGIGMRFSRGGATVNIVYPDV FSSRVSGTTNYSLEGSRFTLEIIKTAATTGSGTLATGKYTSYDWESGGNPILETYLSANA ITVVSPSCTVMSGKNMNVDVGSIRRSDLKGVGTTASGKDFNIDLQCSGGLSETGYANIST SFSGTLATSTTATMGALLNEKAGSGMAKGVGIQVLKDGSPLQFNKKYTVGRLNNQEIRYI TIPLHARFYQYGPTTSTGEVESHMIFNLTYD >gi|289775900|gb|GG745510.1| GENE 343 366422 - 368908 3207 828 aa, chain - ## HITS:1 COG:XF0081 KEGG:ns NR:ns ## COG: XF0081 COG3188 # Protein_GI_number: 15836686 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Xylella fastidiosa 9a5c # 38 816 102 878 901 534 37.0 1e-151 MKQRSFCPGRLSTAIAIALCCFPPFSSGQENPGTVYQFNDGFIVGSREKVDLSRFSTSAI TEGTYSLDVYTNDEWKGRYDLRIARDKDGNLGVCYTKAMLTQYGIAAEKLNPKLSEQEGY CGSLKSWRNEENVKDNLVQSSLRLNISVPQIYEDQRLKNYVSPEFWDKGITALNLGWMAN AWNSHTSSVGGSDNSSAYLGVNAGLSWDGWLLKHIGNLNWQQQQGKAHWNSNQTYLQRPI PQLNSIVSGGQIFTNGEFFDTIGLRGVNLSTDDNMFPDGMRSYAPEIRGVAQSNALVTVR QGSNIIYQTTVPPGPFTLQDVYPSGYGSDLEVSVKEADGSVEVFSVPYASVAQLLRPGMT RYALSAGKVDDSSLRNKPMLYQATWQHGINNLLTGYTGVTGFDDYQAFLVGTGMNTGIGA LSFDVTHSRLKSDTHDDSGQSYRATFNRMFTDTQTSIVLAAYRYSTKGYYNLNDALYAVD QEKNSRSNYTLWRQKNGMTFTVNQNLPDGWGGFYLSGRVSDYWNRSGTEKQYQVSYNNSF GRLSWSASAQRVYTPDSSGHRRDDRISLNFSYPLWFGDNRTANLTSNTSFNNSRFASSQI GINGSLDSENNLNYGVSTTTATGGQHDVALNGSYRTPWTTLNGSYSQGEGYRQSGLGASG TMIAHSGGVVLSPESGSTMALIEAKDAAGAMLPGSPGTRVDSNGYAILPYLRPYRINAVE IDPKGSLDDVAFDRTVAQVVPWEGSVVKVAFGTTVQNNLTLQVRQANHEPLPFAASIFSP DGKEIGVVGQGSMMFISDANAKRAIVKWSGGQCSVDLGPQTTKDSVCR >gi|289775900|gb|GG745510.1| GENE 344 368920 - 369621 707 233 aa, chain - ## HITS:1 COG:ZecpD KEGG:ns NR:ns ## COG: ZecpD COG3121 # Protein_GI_number: 15799824 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 5 226 13 237 243 163 38.0 3e-40 MKRIALFFCFIFSFAAHANNIIVNGTRFIYPGNEKEITVQLSNNADRPALAQAWLDNGDA DATPDTITTPFIITPPISRVDAKSGQTLRIKLGSSAGLAKDKETLWWLNLLEIPPVVANQ KNEGQNVLQLAIRSRFKFIYRPAGLGNRDAAAEKLTLTANGSSLAINNPTPFYITVSRIS RDGGKALNSKTVMLAPQSSQTVALSSAVNRGETLTVNNINDYGADVAVKVAVK >gi|289775900|gb|GG745510.1| GENE 345 369717 - 370325 429 202 aa, chain - ## HITS:1 COG:no KEGG:KP1_4561 NR:ns ## KEGG: KP1_4561 # Name: mrkA # Def: type 3 fimbrial protein MrkA precursor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 202 1 202 202 310 99.0 3e-83 MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSP VTLTEVKAAAADTYLKPKSFTIDVSNCQAADGTKQDDVTKLGVNWTGGNLLAGATSKQQG YLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAKGDAAAVADGARFTYYVGYAT SAPTTVTTGVVNSYATYEITYQ >gi|289775900|gb|GG745510.1| GENE 346 371031 - 371240 317 69 aa, chain + ## HITS:1 COG:no KEGG:KP1_4563 NR:ns ## KEGG: KP1_4563 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 69 13 81 81 98 100.0 7e-20 MKNVKLLAAAGMLSLVSFASFAHPVSVTADTLDSAEAKIATIAKEQGASYHITEAYTGNQ VHMTAELSK >gi|289775900|gb|GG745510.1| GENE 347 371336 - 372232 1109 298 aa, chain - ## HITS:1 COG:AGc468 KEGG:ns NR:ns ## COG: AGc468 COG0697 # Protein_GI_number: 15887623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 284 10 283 287 192 46.0 9e-49 MAFLSRSLMIDLLHTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRF PQRGEWAKLIVTGILNIGAFQALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSP WLAVFSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISMALGTWLSRRWALSLPIVALT GWQLAIGGVVLAPVALIVDPPLHQVTALQVAGYLWLCVAGAMLAYGLWFRGIGRLSPVAV SAMSLLSPVTAVVLGWIFLGQKIQGMALVGLIVVLASVLSIQRALARQAAGAKTKKAP >gi|289775900|gb|GG745510.1| GENE 348 372314 - 372820 502 168 aa, chain + ## HITS:1 COG:SMc00380 KEGG:ns NR:ns ## COG: SMc00380 COG1846 # Protein_GI_number: 15964053 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 7 166 5 164 164 152 52.0 2e-37 MDKSPAIDAVDRILAQWQRERPDLDCSPMGPIGRLKRCAMLLEPQVEVAFTRHDLVRWEF DMLATLRRAGPPFTLSPTQLFSTLMITSGTMTHRLKALEKRGFITRLPNPEDARSMLVAL TPAGRERIDEAVETHVDNERQLLAGLSDGECQQLDQALRVLMRLLESR >gi|289775900|gb|GG745510.1| GENE 349 372817 - 373773 1176 318 aa, chain - ## HITS:1 COG:YPO2901 KEGG:ns NR:ns ## COG: YPO2901 COG2215 # Protein_GI_number: 16123092 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 25 302 33 324 340 167 38.0 3e-41 MNTPIAQRDWRLLAAGSGGLLLLVAGIMLHSHWGDFLQWCLATQITLHRYLVMYLLLLNN HQYSGGVWLLVGAFLYGVLHAIGPGHGKFIVTTYLSTNPESLTAARVVPFLGSLLQGVSA ILFVFILAVGLNLAAGDLSASRWYVEKISALTIGAFGVYIIYRALRSLGPGKRVIRAMTP VHQHDASCGCGHHGVGHDLLGADWKTRLGVVLAIGARPCSGAIMILLFANALGIVSWGIA AVMTMALGTGLSILGLSLTVHYARHRMANRLTVGSRSRPWLLPLVKILGGLALILFAAGL FFTVVPISANGDFIAAGC >gi|289775900|gb|GG745510.1| GENE 350 373928 - 374917 940 329 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0785 NR:ns ## KEGG: Kvar_0785 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 329 1 329 329 654 96.0 0 MRWLLFLLFTFSTFGAWAGNCDLNTSYIQKGIEGYGTYIFKPVTLSGTLALREGTFTNDD WLFICNSLSNVVITLTGEAQHSTEYNFLVGHEKYKIKFDLSPHNLSGTDLTENISYKLSD IFTDTASISYAISKGEAAGRPVITPGQAFTVSYKLNLRYCQNKDKECTNIPITYIYHIIL QINVMTCGFENPTTEINMGEYNFIDIKQGTVAYRPEVIYIDCRQGESGVLELTPGKIEYS FRSASGLKNGQVLANDEELSATGAGEVGFHIQDASGADIQYDNGYLYETPQEAVHGKNPI TLNIKPMKYGENIRTGEMKSRVIIVVNNN >gi|289775900|gb|GG745510.1| GENE 351 374930 - 377410 2235 826 aa, chain - ## HITS:1 COG:ECs2915 KEGG:ns NR:ns ## COG: ECs2915 COG3188 # Protein_GI_number: 15832169 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 826 1 826 826 1165 68.0 0 MLRMTSLALAIIASLFAEALAAEETFDTNFMFGGMKGVKDSHYQFTDDAPIAGEYNLDVY VNNKWRGKYDLTVKEQPGESCLSHSQLQQLGIKAERLDKKDLAQCITLREAVQGGKYHFD ISTLTLELTVPQAFVNELEAGYASPESWDRGVNAFYTSYYASQYYSDYKSAGNNKSTFAR FTSGLNLLGWQLHSDASYNNNDSGAGEWKSNTLYLERGFGEIESTLRAGDMYTSGDIFDT VRFRGVRLYRDMQMLPNSRRNFTPIVQGIAQSNALVTIEQNGFVIYQKEVPPGPFAIADL QMAGGGADLDVSIREADGTVTSYLVPFSSVPNMLQAGVSKYDLAAGRSHIEGADRQADFI QGTYQYGLNNLLTLYGGSMLSNHYSAFTLGTGWNTWLGAISVDATQSHSEQDNGTYDGQS YQVAYSKFLTPTQTRFGLAAYRYSSRDYRTFNDHVWAKNRTHYHRDENDVYDIADYYQYD FGRKNSLSASLSQALPAGYGAISLSALWRDYWGKSGSNKDYQLGYSNTWQRLTYTLSASQ TYDEYHHQDKRFNLYFSIPFSWGDDLTAPRRRLNLSNSTTFDNSGFASNNTGLNGIAGSR DQFSYGVNLSHQQQNNETAAGANLTWNAPLATLSGSYSQSSNYTQASGSLSGGVVLWSGG VNLANRLSDTFAILQAPGLEGAYVNGQKYRTTNGKGIVLYDNLTPFRENALMLDVSDSHS TTELKGNRKMVAPYRGAVVVSHFDTDQRKPWLIHARQAAGEPLPFGYEIEDDRGQNVGVV GQGSLLYIRTDTLPSTLKVAVDKAKNQYCTITFKQTIDEEQTYVCR >gi|289775900|gb|GG745510.1| GENE 352 377423 - 378106 388 227 aa, chain - ## HITS:1 COG:yehC KEGG:ns NR:ns ## COG: yehC COG3121 # Protein_GI_number: 16130048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 224 16 239 239 266 57.0 3e-71 MKGFILLLLTFFIIPAQAGIVIYGTRVIYPAGKNEVMVQLMNRGDRGALVQAWIDDGNTS IAPENIRVPFLISPPVVRVRANTGQQLKIKALSNTLPQNQESLFYLNVLDIPPNASVNDG KNVVKFAIQNRIKLFYRPEGVAGVTQASFHHLDLQQKGKNVLLKNNSANWITIPEIKVNN VKGNSKAIMLAPFSQQMITLSGSVARQYKITLIDDYGNYISDSISVK >gi|289775900|gb|GG745510.1| GENE 353 378168 - 378710 374 180 aa, chain - ## HITS:1 COG:STM2152 KEGG:ns NR:ns ## COG: STM2152 COG3539 # Protein_GI_number: 16765481 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 180 1 176 176 115 45.0 4e-26 MKRLTVAAAVLSTVFMSAGAFADTDQGEVIITGRVVGTTCQFLDGNNSTTITMNQVGQES LASLGAGATYTGIKNSTTVPLKLKCTGAAPKISLARNQFDTTYPNITKNTVAGGASGVGF VVTANDAELNANSLIPLNGDPDENGVYTIDFSAQYAVVAAGNAVTQGDVESTLTLTVVTE >gi|289775900|gb|GG745510.1| GENE 354 379060 - 379305 157 81 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0781 NR:ns ## KEGG: Kvar_0781 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 81 1 81 81 79 100.0 3e-14 MKRGLLALVCVALLAPSFSAQATWRGDKRQDARDIRQDSREQGRDTKQECVRNNNQSNAS CRHDKRENRREGRQEARDEKW >gi|289775900|gb|GG745510.1| GENE 355 380134 - 380763 314 209 aa, chain + ## HITS:1 COG:ECs5271 KEGG:ns NR:ns ## COG: ECs5271 COG0582 # Protein_GI_number: 15834525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 9 208 1 200 200 343 82.0 1e-94 MPAIKGKTMTNNADIKKRNFLTQNEIESLLKAADTGLYAARNYCLTLLCFIHGLRASEIC RLRISDIDLAARCVYIHRLKKGFSTTHPLLEKEIHALKRWLAIRSSWPQAASEWLFLSRK GNPLSRQQFYQIIASSGDLAGLPLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRH TVWYTASNAGRFYGIWDNTRDKQRSSLIQ >gi|289775900|gb|GG745510.1| GENE 356 381227 - 381835 426 202 aa, chain + ## HITS:1 COG:fimE KEGG:ns NR:ns ## COG: fimE COG0582 # Protein_GI_number: 16132134 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 192 1 192 198 309 82.0 2e-84 MNRRRFLTAKEVQAMMQAARQGPTGERDYCLILLAFRHGMRISELLDLHYHDLDLHEGRV NVRRLKNGFSTIHPLRFDEREAIERWSQVRAGWKAAAKTDALFISRRGTPLSRQQAYRII RSAGENAGTVTHTHPHMLRHACGYELAERGTDTRLIQDYLGHRNIRHTVRYTASNAARFA GIWERNNLLEEKGLPKENDLND >gi|289775900|gb|GG745510.1| GENE 357 382316 - 382864 637 182 aa, chain + ## HITS:1 COG:ZfimA KEGG:ns NR:ns ## COG: ZfimA COG3539 # Protein_GI_number: 15804889 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 1 182 1 182 182 186 80.0 2e-47 MKIKTLAMVVVSALSLSSAAALADTTTVNGGTVHFKGEVVNAACAVDAGSIDQTVQLGQV RSAKLATAGSTSSSVGFNIQLDDCDTTVATKASVAFSGTAIDSSNTTVLALQNSAAGGAT NVGVQILDSTGTPLALDGATFSAATTLNDGTNIIPFQARYYATGAATAGTANADATFKVQ YE >gi|289775900|gb|GG745510.1| GENE 358 382935 - 383471 568 178 aa, chain + ## HITS:1 COG:fimI KEGG:ns NR:ns ## COG: fimI COG3539 # Protein_GI_number: 16132136 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 11 178 48 215 215 275 75.0 3e-74 MQGMKSGLLLLLPPLALAGNQWNITLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISS NRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNPDVLSVGEGPGIASGIGI ALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ >gi|289775900|gb|GG745510.1| GENE 359 383530 - 384225 867 231 aa, chain + ## HITS:1 COG:ECs5275 KEGG:ns NR:ns ## COG: ECs5275 COG3121 # Protein_GI_number: 15834529 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 8 230 18 240 241 371 83.0 1e-103 MATTTRGILAGCLLFVAGALSASAQAGVALGATRVIYPAGQKQVQLAVTNNDDNSTWLIQ SWVENADGQRDGRFVITPPLFAMQGKKENTLRIIDATNNQLPQDRESLFWMNVKAIPSMD KSKLSDNTLQLAIISRIKLYYRPGKLALPPDQAAEKLTFSRSGSSLTLTNPTPYYLTVTE LNAGTRILENALVPPMGKTSVKLPADAGSTITYRTINDYGALTPKMNGVLR >gi|289775900|gb|GG745510.1| GENE 360 384306 - 386921 3367 871 aa, chain + ## HITS:1 COG:ECs5276 KEGG:ns NR:ns ## COG: ECs5276 COG3188 # Protein_GI_number: 15834530 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 35 871 43 878 878 1357 79.0 0 MSHRKYGLDHWGCRSARRLITPALTLWLCSQPFAARADLYFNPRFLADDPAAVADLSGFE KGQEVPPGTYRVDIYLNNGFMTTRDVTFQADAQGHGLSPCLTRGQLASMGVDTGRVPGMA TLDSAACVPLTTLISEATTRFDVGQQRLYLTVPQAFMGTRARGYIPPELWDNGITAGLIN YNFTGNNVHNTTGGSSRYAYLNLQSGLNVGAWRLRDNSTWSYSSGSGSASSSENRWQHVN SWLERDITPLRSRLTLGDSYTNGDVFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARG TAQVSIKQNGYEIYQSTVPPGPFTIDDLYAAGNGGDLQVTIKEADGSRQVFSVPWSTVPV LQREGHTRFALTAGEYRSGNSQQETPDFFQSTAMHGLPAGWTLYGGTQLADRYRAFNLGV GKNMGYFGALSLDITQANATLADDSEHQGQSVRFLYNKSLDETGTNLQLVGYRYSTRGYY NFADTTYRRMSGYSVETQDGVIQVKPKFTDYYNLAYSKRGKVQLSVTQQLGRTATLYLSG SHQTYWGTDDADEQLQAGLNAAVDDINWSLSYSLTKNAWQQGRDQMLAVNVNIPFSHWLR SDSRSVWRHASASYSLSHDLNGRMTNLAGLYGTLLEDNNLSYSVQTGYAGGGNGDSGSTG YTALNYRGGYGNANVGYSRSDGFKQLYYGVSGGVLAHANGITLSQPLNDTVVLVKAPGAG GVKVENQTGVRTDWRGYAVLPYATEYRENRIALDTNTLADNVDLDDAVVSVVPTHGAIVR ANFNAQVGMKILMTLTHRGKPVPFGALATGDSNQSGSIVADNGQVYLSGMPLAGKVRVKW GDGPDAQCVADYRLPPESQQQALSQLSAACR >gi|289775900|gb|GG745510.1| GENE 361 386932 - 387459 591 175 aa, chain + ## HITS:1 COG:ECs5277 KEGG:ns NR:ns ## COG: ECs5277 COG3539 # Protein_GI_number: 15834531 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 6 175 7 176 176 224 70.0 5e-59 MKTLQYLLGALLTLAAPLSFAADSTITISGYVRDNACAVAGESKDFTVDFQDNAAKQFYA VGATTPPVPFRIVLSPCGTSVTAVKVGFTGVADSVNTSLLKLDAGASAAAGMGVEILDQQ QSRLPVNAPSSAMSWTTLTPGQTNILNFYARLMATQVPVTAGHVNATATFTLEFQ >gi|289775900|gb|GG745510.1| GENE 362 387472 - 387972 608 166 aa, chain + ## HITS:1 COG:fimG KEGG:ns NR:ns ## COG: fimG COG3539 # Protein_GI_number: 16132140 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 166 1 167 167 200 71.0 1e-51 MKWTHVGWLLAGLLTASASLRAADVTLTVNGKVVARPCTVSTVNATVELGDLYTFSLIGA GSASAWHSVALDLSNCPVGTSRVKATFSGTTDSTGYYKNQGTAGNIQLELQSEDGTTLNN GSSQSVQVDEASQSARFPLQVRALSVNGGATQGTIQAVINVTYTYA >gi|289775900|gb|GG745510.1| GENE 363 387990 - 388895 966 301 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0772 NR:ns ## KEGG: Kvar_0772 # Name: not_defined # Def: FimH mannose-binding domain protein # Organism: K.variicola # Pathway: not_defined # 1 301 2 302 302 514 100.0 1e-144 MKKIIPLFTTLLLLGWSMNAWSFACKTATGATIPIGGGSANVYVNLTPAVNVGQNLVVDL STQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGTSYPFPTTTETARVVYDSR TDKPWPTVLYLTPVSTAGGVAITAGSLIAVLILHQTNNYNSDSFQFIWNIYANNDVVVPT GGCDVSARDVTVTLPDYPGSMAVPLTVHCAQSQQLGYYLSGTTADSANAIFTNTASASPA QGIGVQLTRNGSAVPANSTVSLGTVSTSPVNLGLTATYARTTGQVTAGNVQSIIGITFVY Q >gi|289775900|gb|GG745510.1| GENE 364 388895 - 390304 1117 469 aa, chain + ## HITS:1 COG:SMb20447_2 KEGG:ns NR:ns ## COG: SMb20447_2 COG2200 # Protein_GI_number: 16264177 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Sinorhizobium meliloti # 221 459 15 252 264 95 27.0 1e-19 MTDYILSPCSLAARGLSQLMLNAAKRPVELPVEGVSQRELTAVTRIVVFLPDDPLWMLTT LRQAARLLDQAMQPLPMLILSRSPAIWLWQTLLYQVSHPDRLRNVHTAPADLSCTELADR LENAPRLERLASEAALLHDKRAAGLSHAEFKVILALLQGQTIGEQARRLRLSQKTLYTQR LAGVKKLVKYHPHLAPRFPRTLLPRSSASSLSAFEQEWVQAIHDRQVFPVFQPIVDSRSQ LQGVEILIRWRHRGQVLHPQAFLPQFRADYAWLLLTAFVLQEAVQNINEHPGTFYFSVNI PSSLAASDSLLRMVEAARQQLRQPEGVERLVLEYAETIDFRRQSRSTAQVEELQRAGVRV MLDDCFSQGSVIFPARRLHFNAYKLDMSIVNDAQHDQKALALIKSLAYYCQLSGSRCVAE GVDSLAKFTQLKSLGIDRFQGYLFSPPMRREHLPDLIRRFSHQRDPADR >gi|289775900|gb|GG745510.1| GENE 365 390347 - 390619 356 90 aa, chain - ## HITS:1 COG:yjdJ KEGG:ns NR:ns ## COG: yjdJ COG2388 # Protein_GI_number: 16131953 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 1 90 1 90 90 152 84.0 1e-37 MEILEGHNKFYVNDAQGNQVAEIVFVPTGDHLSIIEHTDVDPSLKGQGVGKQLVAKVVEK MRQEQRKIIPLCPFAKHEFDNTREYDDIRA >gi|289775900|gb|GG745510.1| GENE 366 390631 - 390861 303 76 aa, chain - ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 149 88.0 2e-36 MDKELLEAGYRAYTGEKIDVYFNTAICQHSGNCVRGSAKLFNLKRKPWIIPDEVDVATVV KVIDTCPSGALQYRHK >gi|289775900|gb|GG745510.1| GENE 367 391068 - 391340 146 90 aa, chain + ## HITS:1 COG:no KEGG:KP1_4583 NR:ns ## KEGG: KP1_4583 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 90 1 90 90 139 98.0 4e-32 MNHIATIARPARLLLVLPLSGCSLSPAIPVLGAAFPGWFFCLLGGAFLLIPCHILITRKG WQPRFSPLVFSYVALMFLFATLLWFLFFVH >gi|289775900|gb|GG745510.1| GENE 368 391347 - 392372 1590 341 aa, chain + ## HITS:1 COG:ECs5064 KEGG:ns NR:ns ## COG: ECs5064 COG1566 # Protein_GI_number: 15834318 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 10 341 10 342 343 373 61.0 1e-103 MTTSRTPLLRKKWPLLALVLAAILALILVIWQLQTSPETNDAYVYADTIDVVPEVSGRIV EMPIRDNQRVKKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVA AAVERARALVKQTTSTRTRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQARQASA AVTGVDAMVAQRAGILAQIALAELHLEFTEVRAPFNGVVVALKTTVGQYASALKPVFTLL DDDRWYVIANFRETDLNNVRPGVAARITVMTNHNRTFNGVVDSVGSGVLPEGGSVIEGLP LIQKSINWVHVSQRFPVKIAVSDPDPALFRMGASASAVLQP >gi|289775900|gb|GG745510.1| GENE 369 392385 - 394268 2367 627 aa, chain + ## HITS:1 COG:ECs5063 KEGG:ns NR:ns ## COG: ECs5063 COG1289 # Protein_GI_number: 15834317 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 37 539 1 515 636 273 36.0 5e-73 MFPLAHFLRQELRDAPGRASYTLRLTLSCAVLITLFMTLQIPFLAVALIVVFYVSQPNVL MIKLVSVVFFVTVTVALGGVLLIIKWTYDYPLIRLAASVALFFCAIYLMRVLGKLGLAFF VVALAVIYAQTFPSMTSQSEILVRLLLWLWVAINTAILVTLLVNACFQQAFPGNQFKARL AGMLHEVARRLTAPGDEAPPTFGETAAQFNQLQSLFAQASRATPEIAAEPQAWRSRLAAT LRCYQLAALLQADEADSDDRQQLSQAVLKLKSALSEEQFDGAIPPLALSGRGINRAVLQE MATLLQQLAQGEPVALPLGEVEKAPLLAPDAWRNPAYLHFALKTLLATLICYVFYTAADW QGLHTIMLSCVIVAQPGLGATMQKTWLRIGGALLATLLALLLIVFVQPWTDSLSGLLAMS LPVLALAAWIAAGSERIAYAGIQIGFTFALAFLSWFGPLTNLTELRDRVLGILLGVLVSS IVHLYLWPDSEAPQLKSRLASLYRRLADCLAAPHDAVPLAPLFVAFTDSEALLHRVRAEP LGTWAHPWPQAKGWPMRATLAQAEEIARLSEGYRLNAERIEQEAAAPDGTLAADLRNPFG PALATALAALPDWGPTPIATEQQAKTS >gi|289775900|gb|GG745510.1| GENE 370 394265 - 395713 1744 482 aa, chain + ## HITS:1 COG:ECs5062 KEGG:ns NR:ns ## COG: ECs5062 COG1538 # Protein_GI_number: 15834316 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 8 481 7 481 488 412 47.0 1e-115 MMMLPFPARLRVTLFTLTLTLLSGCALIQDEPSQVAIVNPQQAQLAQVIHLANSDWPAAR WWEAYDDPQLNMLINRALQNSPTMQAARLRISQSQSTVELARSAMGLQATAVAAQNRLRI TDKSFSWPYSYSLPVDKNGPWYTLNTVGVGAQLNIDLWGADRARVAAAIGEKNARLAETA GIELDIASSVAQLYFAMQATFQKIALLQELEGIAQFSVAAHEHRTQRGVEDSVDVANARA EQLAARQQIISAEGMLTQYRETLRALIGADAQSMPAIHPVALPALQETLPSSLSFELLAR RPDLQALRGYVTASLSQVDAAKAAFYPHFDIKAFWGYNALSVGDLFKSSFQQINLLPGLY LPIFDGGRLNANLQSVRTASNILIKQYNQAVLDAVRDVAISSSQLNDLNQQRALQQLKVT AAQTTTDSARAHYQRGLLSRYAAEEARRAVLAQQLLLLDIEAQRLSTDITLIKALGGGYR GQ >gi|289775900|gb|GG745510.1| GENE 371 395979 - 396278 355 99 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0764 NR:ns ## KEGG: Kvar_0764 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 99 1 99 99 189 100.0 3e-47 MPAVIDKALDFIGGMNTSEPVPQSMDESTAKGILKYLKELGVPATPADVAERGQQQGWSA GFTDKVADWAERIAAGERMVIKHPEFFSTYMQEELRALV >gi|289775900|gb|GG745510.1| GENE 372 396462 - 398015 2080 517 aa, chain - ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 5 454 1 443 492 273 38.0 5e-73 MHSSVNKNESRTFFGHPYPLGSLFFTEMWERFSFYGIRPLLILFMAATVYDGGMGLAREN ASAIVGIFAGSMYLAALPGGWLADNWLGQQRAVWYGSILIALGHLSIALSAWLGNDLFFI GLMFIVLGSGLFKTCISVMVGTLYKKGDARRDGGFSLFYMGINIGSFIAPLISGWLIKSH GWHWGFGIGGIGMLVALVIFRVFAVPSMKRYDAEVGLDSTWNSPVAKKNGVGAWLLALAL GVAVLVTLISLGTIVINPVAVASVLVYVIAASVALYFIWLFVFAGLNRKERARLLVCFIL LVSAAFFWSAFEQKPTSFNLFANDYTNRMIGDFEIPAVWFQSINALFIILLAPVFSWAWP ALARKNVRPGSMTKFVIGILCAAAGFGLMMLAAQNVLSNGGAGVSPLWLVGSILMLTLGE LCLSPIGLATMTLLAPERMRGQMMGLWFCASALGNLAAGLIGGHVKADQLSLLPDLFARC SIALLICAAVLAVLIVPVRRMLENSRSSAGQTSVSNA >gi|289775900|gb|GG745510.1| GENE 373 398492 - 398914 422 140 aa, chain - ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 2 140 3 141 141 222 80.0 1e-58 MSITIYHNPDCGTSRNTLALIRNSGAEPTIIYYLETPPSRDELRQLIAAMAIPVRALLRK NVEPYDALGLAEDRFTDDQLIDFMLQHPILINRPIVTTPRGTRLCRPSEVVLEILTASQK GAFVKEDGEPVIDAAGQRVK >gi|289775900|gb|GG745510.1| GENE 374 398924 - 400216 1763 430 aa, chain - ## HITS:1 COG:arsB KEGG:ns NR:ns ## COG: arsB COG1055 # Protein_GI_number: 16131374 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Escherichia coli K12 # 1 427 8 434 436 595 86.0 1e-170 MLLAGAIFVLTLVLVIWQPRGLGIGWSAAFGAALALATGGVQLADIPVVWHIVWNATATF IAVIIISLLLDESGFFEWAALHVSRWGRGRGRLLFTWIILLGAAVAALFANDGAALILTP IVIAMLRALGFSKGTMLAFVMAAGFIADTASLPLVVSNLVNIVSADFFAIGFREYASVMV PVDLAAILTTLAMLHLFFRRDIPPAWDMALLKAPVTAIKDPATFRTGWGVLLLLLVGFFV LDPLGIPVSAIAAPGAGILFAVAKRGRVINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG LTDYLTTVLNMLAERGLWAATLGTGILSAFLSSIMNNMPSVLVGALSIDGSAATGTIKEA MIYANVIGCDLGPKITPIGSLATLLWLHVLAQKHITIGWGYYFRCGITMTLPVLLVTLAA LALRLSFNQP >gi|289775900|gb|GG745510.1| GENE 375 400269 - 400598 241 109 aa, chain - ## HITS:1 COG:ECs4373 KEGG:ns NR:ns ## COG: ECs4373 COG0640 # Protein_GI_number: 15833627 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 3 103 4 104 117 152 78.0 2e-37 MSLLPLQLFKNLADETRLGIVLLLKARGELCVCDLCTALAQSQPKISRHLAMLRESGLLL DRKQGKWVHYRLSPQMPAWAAQVIEQAWLSQQDDVRMMVCRLADGAGCQ >gi|289775900|gb|GG745510.1| GENE 376 400818 - 401111 306 97 aa, chain + ## HITS:1 COG:mlr3009 KEGG:ns NR:ns ## COG: mlr3009 COG2350 # Protein_GI_number: 13472645 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 2 96 5 98 101 90 46.0 7e-19 MSTLYVVVLTYIKPLEEVDDAIPAHVEWLKKGYADGLFLASGRRLPRTGGVILAKCASRE MLESRLSQDPFQQLGLARTEIIPFEASMASPVLQSLL >gi|289775900|gb|GG745510.1| GENE 377 401130 - 401702 469 190 aa, chain + ## HITS:1 COG:SMb20675 KEGG:ns NR:ns ## COG: SMb20675 COG3506 # Protein_GI_number: 16265130 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 188 1 190 191 172 46.0 4e-43 MQPSFHWINEPAEWRRDTDGLTVVTDRHTDFWRHTWYGFERFSGHLYATEVEGDFTLQAK ICADFTTLYDQAGLMMMADEQTWLKAGIEFNDDAPAIGSVLTLTHSDWATGLFPGDPRTF WLRLTRKGDALRLQYSTDGERWPLLRLGYFPPGPVKAGVMCCSPERGGLAVAFQDIQLSP PSDKALHDLS >gi|289775900|gb|GG745510.1| GENE 378 401706 - 401981 132 91 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0757 NR:ns ## KEGG: Kvar_0757 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 91 1 91 91 122 100.0 3e-27 MGRRFMVCMFALVAFSASAAQGVHGGHNGQSVIAGADGGNGSNGGDSDNSSGRAGCPGGT DPDKHGHFYLPGTREPCNPGPQDAEKVGSSR >gi|289775900|gb|GG745510.1| GENE 379 402151 - 403050 723 299 aa, chain - ## HITS:1 COG:mlr0648 KEGG:ns NR:ns ## COG: mlr0648 COG0583 # Protein_GI_number: 13470844 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 291 1 291 311 180 34.0 3e-45 MNNALYNQIRIFQSIAREGTISAAARKLEITPPSVSNALKLLEEHIGHPLFVRTTRRIEL TETGQQLLEQTAAAVEVLETSLESLRDQNQEPSGAVRITLSRFAYLLILKPAMAAFCQQY PGIQLEISVYDGTVNIIEERFDLGIRFGDILEGGVVARPLMKPFREGLYASSAYLAEYGV PAVPADLNHHRLIGYRFITNNRILPLILNDHGEQLTVEMPGQLISNDIDVMADGIRHGLG IGRLFEPIWRLQPDREQFIPVMEDYWKTYPPVYLYYPKNAGRTKRVKALIDFLIAHTAE >gi|289775900|gb|GG745510.1| GENE 380 403189 - 403497 372 102 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0755 NR:ns ## KEGG: Kvar_0755 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 102 1 102 102 211 100.0 7e-54 MRILCLDIPAPGATLEHYAPHLTAEALHAWGLYKSGFIRDIYFRQDRPGVAIFLECDTVE EANNVMAEFPLAKAGLLTFECIPLGSFISWENLFSAEFKHQE >gi|289775900|gb|GG745510.1| GENE 381 403500 - 404063 674 187 aa, chain + ## HITS:1 COG:CC0205 KEGG:ns NR:ns ## COG: CC0205 COG2249 # Protein_GI_number: 16124460 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Caulobacter vibrioides # 2 172 4 174 185 115 39.0 4e-26 MGTPHILIVSGHPDLNHSIANATILDKVATALPDAEIRRLDRLYPHGNINISAEQESLLK ADVIVWQFPFSWYGLPGLMKQWLDEVFVHGFAHGSTAKLGGKKLLLSFTTGAPQALYTTD GFFGHAIEEYLLPFETTARLCNLELLAPVYTCGISYADRDVDKIAQQKARAREHAARLIA QLKTLVE >gi|289775900|gb|GG745510.1| GENE 382 404084 - 405103 1154 339 aa, chain + ## HITS:1 COG:lin2113 KEGG:ns NR:ns ## COG: lin2113 COG0667 # Protein_GI_number: 16801179 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Listeria innocua # 1 323 1 327 331 310 48.0 3e-84 MQYTRLGKSDLLVSRICMGCMGFGDPLTGQHRWTLDETASRDIIRYGLEKGINFYDTAIA YQNGSSERYVGRALREMAKREEVVLATKFLPRTAAQIAEGISGKEAIARSLDQSLRNLGM DYIDLYIYHIWDHNTPVIDVLEALHTAVTAGKVRAIGISNCYAWQLAKANALAEREGLTP FVSMQSHYNLIMREDERELFGLCAEDNIAMTPYSALASGRLSRLEGYTRRAVEDDYARGK YDGTAEQDRIIIARVAELAERHQVSMTEISLAWLLTKVTAPVVGATQKHHVDGAVSAVNL RLSSEEIRYLEEAYQPHVLTGVMAQNTPQAKDHPQVWTR >gi|289775900|gb|GG745510.1| GENE 383 405136 - 405939 466 267 aa, chain + ## HITS:1 COG:SMa0559 KEGG:ns NR:ns ## COG: SMa0559 COG0599 # Protein_GI_number: 16262745 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Sinorhizobium meliloti # 41 262 36 257 259 226 52.0 3e-59 MKNVIAAAALSLVLSDFAYANEKRDEAMMKITPSTLVDADIHAVSPALARFGREAITEDL WTREALSPRDRSIVTVAMLIARNQPGELKHYIEVALDSGVTPAEVSEIITHLAFYSGWPN AMSAVSVTKAIFAARGITAEALPAASPTLLPLNEQVEKQRAETVEKNVGPISPGLVKFTA DPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDNGLSAEEAGEVVAQAA FYAGWPNAFTAAPVVGEVLRSRESKAE >gi|289775900|gb|GG745510.1| GENE 384 406300 - 407229 245 309 aa, chain - ## HITS:1 COG:mll1141 KEGG:ns NR:ns ## COG: mll1141 COG0583 # Protein_GI_number: 13471227 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 298 1 294 296 255 47.0 7e-68 MSDPDFNLLVALDILLSEASVAGAARRLNLSTSAMSRTLSRLRDVTGDPILVRAGRNMVL TPWAEATRDRARRAVHEARAVLQPSTETFCARSLARLFTIRANDGFVVAFGPALIAAVAD AAPDVCIRFAPKPEKTSRYLREGLVDLEIGVQSNMGPEIRLQRLFEDRFVGVVRKGHPLA KQAEIGVGDYVAWGHVVASPDGALHGSVDDALAELGTKRKIASVVPGFPTALSVALESDL IAMIPALYLLNQQVTDQVHVFELPFKSRRITVSQMWHPRMERDPGHRWLREQILAICGVG RSVMTKEPV >gi|289775900|gb|GG745510.1| GENE 385 407359 - 408747 854 462 aa, chain + ## HITS:1 COG:BMEII0280 KEGG:ns NR:ns ## COG: BMEII0280 COG0477 # Protein_GI_number: 17988625 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Brucella melitensis # 11 453 20 462 463 270 39.0 4e-72 MTLFSSQPGDEGLPGPARARVMAAIMTTTLMGVFDGTMINIALPSMAQEMQVPASIAVWF ANGYLLAAAMTLAIFAALAARLGYRPVFLAGLTTFTLTSLGCALANKPEVLIGMRVLQGI GGAATLSIAPAILRSVFPGRLLGRILGFHALLIASSSAIGPVLGGTILHTLSWQWLFAIN VLPGTLALLLAVRALPRDAIRMQAPFDTLGAILSALLLGSTIMAANSLQNATSQFGSLCW MALAALSGMAFIWQIRRTDHPLLPPTMFKNERFTLAAFTSMIAFVSQGITFIALPFLFQS EYGYSPVVSALLFTPWPLGIVLIAPHAGRWADTISAPAISTLGLVIFVIGLILLATLPAG PSMWDICLRSLVCGIGFGCFQSPNNREMLSNVIREHASYASGVLSIMRTFGQCLGAAAVA VLLAADERSIHVALWSAAAASAVSVIVSASRLRKITHPAETG >gi|289775900|gb|GG745510.1| GENE 386 409039 - 409911 -1 290 aa, chain - ## HITS:1 COG:no KEGG:Sde_2749 NR:ns ## KEGG: Sde_2749 # Name: not_defined # Def: hypothetical protein # Organism: S.degradans # Pathway: not_defined # 12 164 37 189 196 155 47.0 2e-36 MKNNHLTSYDWLNALNNLELLSLHSEILTQLRFRGVIRTKNNPVGDYAEWLVSNALGMTL LSNSSAGADAIDADGLKVQIKARRVTPDNPSRQLSALRNYESADFDYLTAVIFDETYNIL DAYKIPHEVIRDYARHSDHVNAHIVNLKGAILADPRVTSIKENLTVRSSASVNEAAMQTL PPEPMEEVLNQPEKITSSVTLVSLLKAIGMECFVNYYHHFADSNLSSADIIEQMHSREGY TEKSCRGRLSKARKVIRDGLSIEALTLIADSGRIQDSVRSNALKLISVLE >gi|289775900|gb|GG745510.1| GENE 387 410086 - 410544 80 152 aa, chain - ## HITS:1 COG:ECs5252 KEGG:ns NR:ns ## COG: ECs5252 COG1396 # Protein_GI_number: 15834506 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 3 154 154 278 94.0 2e-75 MTLRKLFGQRVKELRIATGMSQEAFADRCGFARSYMSRIERGGSNASLDAIEVLANALSV EPWQLLASDLSEDNDPELLVPYAADGSCFHPGLASTRDGSFGVGDKAAQKRFGTFSEALE YLRSMETAKWRRPNASGNWGIVSAVRWGKLRR >gi|289775900|gb|GG745510.1| GENE 388 410667 - 411161 277 164 aa, chain + ## HITS:1 COG:no KEGG:ECs5251 NR:ns ## KEGG: ECs5251 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157J # Pathway: not_defined # 1 163 1 163 257 287 95.0 8e-77 MSKTRLSKPGFSAKSVLTIMLIAASSASYAAESIDQLATRIGMDHFREAIKKGDRSAFKT LPAKGYKNGLTGLLIKTNTYVNPEYSFADCDTDTVIISVQEHKTLPGCRISLKLATKDSD GSYHDNGIRIEYSIATGSKKFIANNSAWAQHAISGDKVLELSLK >gi|289775900|gb|GG745510.1| GENE 389 411401 - 411865 -203 154 aa, chain - ## HITS:1 COG:no KEGG:RCAP_rcc00930 NR:ns ## KEGG: RCAP_rcc00930 # Name: not_defined # Def: hypothetical protein # Organism: R.capsulatus # Pathway: not_defined # 1 139 254 388 398 93 40.0 3e-18 MLIYQTENFIKIASKKYGEPANTAVIDEIIAVGKQRTNDSESAVSLISHSLNENTTHSNV GLIKVELKREVKNFTVSRGLTPNLDSAPHMIVNLLSSPHDNIEYKVSGSTGTVYDFNIHI HSKNNHYLPIGIYEFEYIAKVENQDTEAGLDVSP >gi|289775900|gb|GG745510.1| GENE 390 412783 - 413349 167 188 aa, chain - ## HITS:1 COG:ECs5249 KEGG:ns NR:ns ## COG: ECs5249 COG1961 # Protein_GI_number: 15834503 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 1 185 3 187 191 274 81.0 8e-74 MATFGYGRVSTMQQNTENQCLELGKAGWQIDYWYADVVSGKVPAMHRKAFSEMLSKIRDG ETLVVAKLDRLGRDAIDVLQTVRALAERNIKVIVHQLGTTDLTSPAGKLLPSMLAAVAEM ERDLLIERTQAGLLRAKAEGKKLGRPSKIAPDARRAIIEKKGRGTSVSALAREYGVSRAT ITTIVEFA >gi|289775900|gb|GG745510.1| GENE 391 413541 - 414008 87 155 aa, chain + ## HITS:1 COG:ECs5248 KEGG:ns NR:ns ## COG: ECs5248 COG4333 # Protein_GI_number: 15834502 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 154 1 154 155 312 92.0 1e-85 MIKDAIFSPCGQYRYSLSRVWDESKPYALFIGLNPSYADAENDDRTLSRCISFAKNWGYG GVYMANLFAFVHTQRHEMMKAPDPIGIDNDSHLIRLIASAGLVVAAWGNEGRHLKRSTVV RQLLPETTMCFVLNATGEPKHPLYMKNDSVLIPLS >gi|289775900|gb|GG745510.1| GENE 392 414830 - 415030 61 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQPALGCCVVHLTNCVDSGKPEQITVSHHFRLNWFAKFEQVSEGFKSKALHVAKMVKRVV SERSTF >gi|289775900|gb|GG745510.1| GENE 393 415586 - 416158 222 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290511296|ref|ZP_06550665.1| ## NR: gi|290511296|ref|ZP_06550665.1| conserved hypothetical protein [Klebsiella sp. 1_1_55] conserved hypothetical protein [Klebsiella sp. 1_1_55] # 15 190 1 176 176 368 99.0 1e-100 MPVSNYYQAQPDCYVRFDWGGLSLEGEFFSYEEYGRDIDPKWGYIRPFDRAIRQQLIDNL QATHGIDLLTFTSQGDLITCDAFVTHKDLQAAHQILVESFDFVDESELTTEREHIGNCRI DLIRRQYIVGSNLKGPKESLDNLNAEFLKWVTPFYTPLRYERKWLTKHRNGLLRFGALVA VAVFAYIHYG >gi|289775900|gb|GG745510.1| GENE 394 416591 - 416812 120 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|317494169|ref|ZP_07952585.1| ## NR: gi|317494169|ref|ZP_07952585.1| hypothetical protein HMPREF0864_03354 [Enterobacteriaceae bacterium 9_2_54FAA] hypothetical protein HMPREF0864_03354 [Enterobacteriaceae bacterium 9_2_54FAA] # 1 73 111 183 183 138 98.0 1e-31 MKIDTKDDKARITFDDIHIYRPAHVTSGIAFPAIDSPNMTVGGQAKAKKALNDIVEQYKR EIVTESSSAAKDW >gi|289775900|gb|GG745510.1| GENE 395 417726 - 419159 76 477 aa, chain + ## HITS:1 COG:no KEGG:RHECIAT_CH0000864 NR:ns ## KEGG: RHECIAT_CH0000864 # Name: not_defined # Def: hypothetical protein # Organism: R.etli_CIAT652 # Pathway: not_defined # 2 475 138 619 622 432 47.0 1e-119 MSDLTYLDFDSNSEILKSLTGKVKPQYIDLFKNATGSTSLKVGLKVESEQLTGLCDQLLD LYSSDEYLESFPNIQKITPEKDPIKIKRLDDSLLDAFINKNNELALSIPDIVDYSDNIYC SFKGRKGISPIYTDISLEEFYDYLGEVDLNTFNIDKIKDFSLNLCNEEGVITKAYNIYRS FIYDIHFDNEEVVYHLCEGEWYKVDQEYLQSLKDYIDARCEDSQLPSYDHDNIKDDIRNY SEENYNEDVANNSACHICLDQKDISPDGYSQIEPCDLISYQDNYCIFHHIKISSRSSQLS HLFNQGVNSIELLILEKSSKEKLKSLIEENIQGKDLDSFNRVIDSGNYKVEFGIITKKPA ELKSENLPLFSKISLMRSLRTLSLYRTEGVVSFIKDISPSKEGYSKHPRITVIVSAGANG KNEVIVDHSQLFPQGTKVARCSQEITNSPIGSRFMIHVKASEHGKLSTSHAWESERL >gi|289775900|gb|GG745510.1| GENE 396 419461 - 419811 81 116 aa, chain + ## HITS:1 COG:AGpAbx82 KEGG:ns NR:ns ## COG: AGpAbx82 COG0454 # Protein_GI_number: 16119372 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 116 20 136 159 110 42.0 7e-25 MESKYDLVDAVPPAEDFCRLRIISGLTPRSPEAAKHALPRTFHGVYIEYSGLIVGMGRIV GDGALNFEIVEVAFDPEHQGKGLGRKIMEALMSWLGQHAPAGAYITLIADVPELYE >gi|289775900|gb|GG745510.1| GENE 397 420327 - 420518 142 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|238792834|ref|ZP_04636465.1| ## NR: gi|238792834|ref|ZP_04636465.1| Integrase [Yersinia intermedia ATCC 29909] Integrase [Yersinia intermedia ATCC 29909] # 1 63 586 648 648 125 96.0 1e-27 MIAQLVGHARGSTTAMTTYRKDRAVEEQFDAISKLAYDLPDIKPFDVKAGLKALKDALRK QKP >gi|289775900|gb|GG745510.1| GENE 398 420636 - 421145 82 169 aa, chain - ## HITS:1 COG:Z5878_2 KEGG:ns NR:ns ## COG: Z5878_2 COG0582 # Protein_GI_number: 15804857 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 62 163 1 92 205 97 47.0 1e-20 MIGNPTENVLAKRKRKNKDQDKRYQFTEEELKLIFSASWFKIGAGEPNQFGRYINFRPYH YWLPLLALYTGGRINELCQLYLSDIRVSESGVAYLDFNLDTPDKVMDDETETDKSLKTPN AQRQMPIHPELIKLGFLKYVEALKVDGRERLFPELKHHEIKGYRGYASK >gi|289775900|gb|GG745510.1| GENE 399 422502 - 423215 695 237 aa, chain - ## HITS:1 COG:ygeR KEGG:ns NR:ns ## COG: ygeR COG0739 # Protein_GI_number: 16130767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 3 237 17 259 259 348 76.0 4e-96 MMKRFYMTLMLATSLVLAGCSSTSDSGATYTVKRGDTLYGISRTTGTSVRDLARLNNISP PYTIEVGQKLKLNGSGASKTTKKKSSSTRTAGVTPSSAVPQSSWPPVGQRCWRWPTSGKV VLPYSTADGGNKGIDIAGTRGQPVYAAGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAH NDKLMVNNGQSVKAGQQIATMGSTDADSVRLHFQIRYRATAIDPLRYLPPQGSKPKC >gi|289775900|gb|GG745510.1| GENE 400 423529 - 424083 620 184 aa, chain + ## HITS:1 COG:STM3039 KEGG:ns NR:ns ## COG: STM3039 COG1443 # Protein_GI_number: 16766340 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 280 70.0 9e-76 MAGEHVILLDEQDQPAGMLEKYAAHTLDTPLHLAFSCWLFNQQGQFLVTRRSLGKKAWPG VWTNSVCGHPQQGETFEQAVTRRCRFELGVEIADIAPVHPAFRYRAVAPNGIVENEVCPV YAARVVSQVQPNDDEVMDYQWVDLETMLSALAATPWAFSPWMVLEAENQDARQALIDFVA RLRG >gi|289775900|gb|GG745510.1| GENE 401 424319 - 425836 2150 505 aa, chain - ## HITS:1 COG:lysS KEGG:ns NR:ns ## COG: lysS COG1190 # Protein_GI_number: 16130792 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli K12 # 1 505 1 505 505 952 94.0 0 MSEQQAQGADAAIDLNNELKTRREKLAALREQGVAFPNDFRRDHTSDQLHADFDAKENEE LEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDLGD IIAARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES RNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQDILGNTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGI KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK >gi|289775900|gb|GG745510.1| GENE 402 425846 - 426745 1244 299 aa, chain - ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 1 299 67 365 365 541 96.0 1e-154 MDTLDQMSQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSA DCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGD YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRA SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE KQAMEDNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL >gi|289775900|gb|GG745510.1| GENE 403 427030 - 428763 2256 577 aa, chain - ## HITS:1 COG:ECs3764 KEGG:ns NR:ns ## COG: ECs3764 COG0608 # Protein_GI_number: 15833018 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Escherichia coli O157:H7 # 1 576 1 576 577 1048 89.0 0 MKQQIQLRRREAVDGVDLPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA VEMLHEAFEKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIAAPNLAELLDLVALGTVADVVPL DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSSDTLPGGLAM YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAATEMSME VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN >gi|289775900|gb|GG745510.1| GENE 404 428769 - 429464 1026 231 aa, chain - ## HITS:1 COG:STM3043 KEGG:ns NR:ns ## COG: STM3043 COG1651 # Protein_GI_number: 16766344 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 1 230 7 236 237 396 83.0 1e-110 MFTLLAASLSGAAHADSAAIKQSLAKLGVQSTDIQPSPVSGMSTVLTDSGVLYVTDDGKH IIQGPMYDVSGAQPVNVTNQLLVGKLNALSNEMIVYKAPKEQHVITVFTDITCGYCHKLH EQMSDYNALGITVRYLAFPRQGLQSQAEQDMKAIWCAKDRNKALDDAMNGKGVQPASCNV DIAKHYTLGVQMGVNGTPAMVLSNGMVLPGYQGPKELKAFLDEHKKQTSGN >gi|289775900|gb|GG745510.1| GENE 405 429505 - 430401 1078 298 aa, chain - ## HITS:1 COG:xerD KEGG:ns NR:ns ## COG: xerD COG4974 # Protein_GI_number: 16130796 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Escherichia coli K12 # 1 298 1 298 298 505 90.0 1e-143 MKQDLAQIEQFLDALWLERNLAENTLSAYRRDLTMLVEWLHHRGLSLASVGSDDLQALLA ERQTGGYKATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVER LLQAPLVEQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVP LGEEAVMWVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSAK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >gi|289775900|gb|GG745510.1| GENE 406 430502 - 431023 901 173 aa, chain + ## HITS:1 COG:ECs3767 KEGG:ns NR:ns ## COG: ECs3767 COG0716 # Protein_GI_number: 15833021 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 326 93.0 2e-89 MNIGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPALMSQYDVLILGIPTWDFGE IQEDWEAVWEQLDTLDLEGKIVALYGMGDQLGYGEWFLDALGMLHDKLATKGVKFVGYWP TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILGEMAEHFS >gi|289775900|gb|GG745510.1| GENE 407 431030 - 431440 397 136 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0741 NR:ns ## KEGG: Kvar_0741 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 136 1 136 136 223 100.0 1e-57 MVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRI HARRGEIKLLTDSRLRWQNAEWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAG EWRDLRRLVLQKPAQE >gi|289775900|gb|GG745510.1| GENE 408 431421 - 431687 285 88 aa, chain - ## HITS:1 COG:ECs3769 KEGG:ns NR:ns ## COG: ECs3769 COG2938 # Protein_GI_number: 15833023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 155 88.0 2e-38 MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMN HGKPADAELQRMVTLIQTRNRERGPVAI >gi|289775900|gb|GG745510.1| GENE 409 431933 - 432916 1384 327 aa, chain + ## HITS:1 COG:ECs3770 KEGG:ns NR:ns ## COG: ECs3770 COG0354 # Protein_GI_number: 15833024 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Escherichia coli O157:H7 # 1 326 1 326 326 535 83.0 1e-152 MAFTPFPPRQPSSSARLPLTLMTLDDWALATISGPDSEKYLQGQITADVSNLTDAQHLLA AHCDAKGKMWSNLRVFRRDGGFAWIERRSLRDVQLTELKKYAVFSKVTIAANDDLVLLGV AGFQARAALAPLFAALPDAAAPVVSEGATSLLWFEHPGERFLLVTDVDTANRVTDALRGE AQLNNSQQWLALNIEAGLPVIDSANSGQFIPQATNLQALGGISFRKGCYTGQEMVARAKF RGANKRALWTLSGTASRVPEAGEDLELKMGDNWRRTGTVLAAVQLDDGQLLVQVVMNNDM EPDSIFRVRDDAGSLRIEPLPYSLEDV >gi|289775900|gb|GG745510.1| GENE 410 433176 - 433835 1157 219 aa, chain - ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 340 91.0 1e-93 MVRKPLITQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASATAITSYSLYGGS MIMLFLASTLYHAIPHQRAKQWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLAKGLMIVIW SLALLGILFKLTIAHRFKILSLVTYLTMGWLSLIVVYQLAVKLAVGGVTLLAVGGVVYSL GVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQS >gi|289775900|gb|GG745510.1| GENE 411 433999 - 434310 334 103 aa, chain - ## HITS:1 COG:STM3050 KEGG:ns NR:ns ## COG: STM3050 COG3097 # Protein_GI_number: 16766351 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 103 1 103 103 160 79.0 8e-40 MQANDITFFQRFQEDILAGRKTITIRDAAESHFKPGDVLRVGRYEDDGYFCTIAVTATST VTLDTLTEQHAQQENMTLEQLRQVIREIYPAEDRFYVIEFKRL >gi|289775900|gb|GG745510.1| GENE 412 434355 - 435089 879 244 aa, chain + ## HITS:1 COG:YPO1253 KEGG:ns NR:ns ## COG: YPO1253 COG1737 # Protein_GI_number: 16121540 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 3 241 1 239 246 325 62.0 5e-89 MSMFSHAAVASLNNLEMMVYHYVIKNRDKVMYMTIRELAEAAGVSTTTVLRFCRKLQCGG YSEFRVRFKLYLEQNEPQQANIGASEIMSFFKSVNNDEFDELLEQAVDIILASERIIFVG AGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTNDMARNALAIVLSVSGETEEILRFASQ FSLHRCKVMSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLA RKIS >gi|289775900|gb|GG745510.1| GENE 413 435209 - 436642 2256 477 aa, chain + ## HITS:1 COG:bglA KEGG:ns NR:ns ## COG: bglA COG2723 # Protein_GI_number: 16130803 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 477 3 479 479 966 94.0 0 MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITHQVEAGKYYP NHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPQGDETQPNEEGLKFYDDMFDELL KYNIEPVITLSHFEMPLHLVQQYGGWTNRKVVNFFVRFAEVVFERYKHKVKYWMTFNEIN NQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPDMQVGCML AMVALYPYSCKPEDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDTQ ILREGTCAYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPHVKASDWGWQIDPVGLRYAL CELYERYQKPLFIVENGFGAYDKVEADGSINDDYRIDYLRAHVEEMIKAVTYDGVDLMGY TPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL >gi|289775900|gb|GG745510.1| GENE 414 436767 - 437126 382 119 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0734 NR:ns ## KEGG: Kvar_0734 # Name: not_defined # Def: suppressor for copper-sensitivity A # Organism: K.variicola # Pathway: not_defined # 1 119 1 119 119 170 99.0 1e-41 MIKRQRKAILFVLLACLVVLTCTAQRMAGMHALVMNLTADSPSLQQNPDKAEAPVTPCEL SAKSLMAVPPMLFEGALLAITLLLAVLAAIPPRIERQWPPSVISPPRLRVHLRLCVFRE >gi|289775900|gb|GG745510.1| GENE 415 437176 - 439185 2098 669 aa, chain + ## HITS:1 COG:STM1114_2 KEGG:ns NR:ns ## COG: STM1114_2 COG4232 # Protein_GI_number: 16764472 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Salmonella typhimurium LT2 # 280 668 1 342 345 439 61.0 1e-123 MFMVFRRLLVCLLWLWLPVSQAADSGWLRVADNQHASVRLRAQSGSNGDTRLLLDVALGK GWKTYWRSPGEGGIAPAIAWHTPLEVNWRWPTPQRFDVAGISTQGYHGDVSFPMTLRGKI PPTLSGVLTLSTCSNVCILTDYPFSLDMTAPAGEQFNYDFTRAMGTLPLRDGLTSALSAS YVSGKLTVTARRDAGWQQPALFIDSMEDVDFGKPSFTSRGDTLTATVPVTDSWGEAAPDL SGKTLSLVLADSGQAQESQIAVAAGSAAAGVALGWVLLMALAGGLILNVMPCVLPVLAMK LGSLVQTERRERGAVRRQFLASVCGIVVSFLALALMMTALRLGNQALGWGIQFQNPWFIG AMALVMVLFSASLLGLFEIRLSSSASTFLATRGGNGLMGHFWQGAFATLLATPCTAPFLG TAVSVALVAPLPLLWGIFFAMGIGMSLPWLLIVAWPGLAQRLPRPGRWMNHLRVVLGLRM LGSALWLVSLLTIHIGRTPVLTLLVILAIGLLLATAWRYRWRTALRAGALAIVVAGAVAF VAQQDGQGPRRDRVNWQPLSEQAIANGLAEHKRVFIDVTADWCVTCKANKYNVLLRDDIQ QALSAPDVVALRGDWSRPSADISQFLTARGNAAVPFNQIYGPGLPQGEILPALLDREQLL ATLSAAKGK >gi|289775900|gb|GG745510.1| GENE 416 439187 - 439798 832 203 aa, chain + ## HITS:1 COG:STM1115 KEGG:ns NR:ns ## COG: STM1115 COG1651 # Protein_GI_number: 16764473 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 1 202 1 206 207 214 51.0 1e-55 MRAITALLLLCVSAFSFAAPAEKPQSNGNDQLAQLLFNDPNSPRTGAKEPKLTIVSFTDY NCPYCKQFDPLLEKIVHDNPDIQLIVKLLPFKGQSSVNAAKAALSTWRQQPDKFWALHQR LMAKKGYHDDASIAAAQKKTATDSVNIDDKTMDSLKMNLILSQVLNIQGTPATIIGDQMV AGAIPAEDLEGLVKEQLAKARGQ >gi|289775900|gb|GG745510.1| GENE 417 439788 - 440291 367 167 aa, chain + ## HITS:1 COG:STM1116 KEGG:ns NR:ns ## COG: STM1116 COG0526 # Protein_GI_number: 16764474 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 165 1 165 168 166 54.0 1e-41 MASKIRRWLRELAVWLLIGAAVSLAVDYFRQPALPQNVSATSLQTLDGRTLDLNAMSQQK PLLLYVWATWCGVCRYTTPSVASLAADGGNVLTVALRSGDNAALEKWLTRKKMTLPTVND PSGQLARQWDIQVTPTLVVIYRGEVKSVTTGWTSGWGMRLRLWLASW >gi|289775900|gb|GG745510.1| GENE 418 440439 - 441182 256 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 247 7 240 242 103 31 2e-20 MAIALISGASRGIGRATALLLAQEGYTVAVNYHHNINAATEVVNTIVESGGKATALRADI SDEAQVMAMFEAVDRMGEPLTALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCR EAVKRMAHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIR VNGVRPGLIYTEMHASGGEPGRVDRVKNSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSF LELAGGK >gi|289775900|gb|GG745510.1| GENE 419 441243 - 444116 4080 957 aa, chain - ## HITS:1 COG:ECs3774_2 KEGG:ns NR:ns ## COG: ECs3774_2 COG1003 # Protein_GI_number: 15833028 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Escherichia coli O157:H7 # 451 957 1 507 507 971 93.0 0 MTQTLSQLENRDAFIERHIGPDAQQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGD ATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVS QGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVH PQTLDVVRTRAKTFGFDVIVDDADKVLDHQDVFGVLLQQVGTTGEIHDYSKLIAELKARK VIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGR IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRI AGRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALQINLRSDIHGAV GITLDEATTREDVLNLFRAIVGDDHGLDIDTLDKDVALDSRSIPAAMLRDDAILTHPVFN RYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVE QAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI PSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLREKAEQAGANLSCIMVTYPSTHGVY EETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQ ASQNAILNANYIATRLKEAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDF GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDRVKAGEWPLEDNPLVNA PHTQGELVSEWNHPYSRELAVFPAGLHNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ >gi|289775900|gb|GG745510.1| GENE 420 444322 - 444711 568 129 aa, chain - ## HITS:1 COG:STM3054 KEGG:ns NR:ns ## COG: STM3054 COG0509 # Protein_GI_number: 16766355 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Salmonella typhimurium LT2 # 1 129 1 129 129 200 89.0 6e-52 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAV AESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYSDGWIFKIKASDEAQVAALLDAT AYEALLEDE >gi|289775900|gb|GG745510.1| GENE 421 444736 - 445830 1444 364 aa, chain - ## HITS:1 COG:STM3055 KEGG:ns NR:ns ## COG: STM3055 COG0404 # Protein_GI_number: 16766356 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Salmonella typhimurium LT2 # 1 363 1 363 364 670 88.0 0 MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRGDAGMFDVSHMTIVDFHGS RIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREK DLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVEGMKPFFGVQSG DLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRLEAGMNLYGQEM DEGVSPLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTEKGVLRGGLPVRF TDSDGNQKEGIITSGTFSPTLGYSIALARVPAGIGDTAVVQIRNREMPVKVTKPGFVRNG KAIV >gi|289775900|gb|GG745510.1| GENE 422 446253 - 447455 1313 400 aa, chain - ## HITS:1 COG:ECs3777 KEGG:ns NR:ns ## COG: ECs3777 COG0654 # Protein_GI_number: 15833031 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 702 85.0 0 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEKAAPQPLAADAPPALRVSAINAASEKL LTKLDVWREIVAQRASCYHGMEVWDKDSFGRISFDDQSMGFSHLGHIIENAVVHHALWQK AQRCADVTLLAPAELQQVAWGENEAFLSLQGGSMLTARLVVGADGANSWLRNKADIPLTF WDYHHHALVATIRTAEPHQAVARQAFHGEGILAFLPLSDPHLCSIVWSLSPAEAKRMQEA DEATFNQALNIAFDNGLGLCQLASEREVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQ GVNLGFMDAAELIDELRRLHAQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGS HPAKKFLRDMGLKLADSLPGVKPQLIRQAMGLNDLPAWLR >gi|289775900|gb|GG745510.1| GENE 423 447466 - 448644 1231 392 aa, chain - ## HITS:1 COG:ECs3778 KEGG:ns NR:ns ## COG: ECs3778 COG0654 # Protein_GI_number: 15833032 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 392 1 392 392 586 74.0 1e-167 MSVLIVGGGMTGATLALAISRLTGGALPVHLIEAQDPHSSRHPGFDDRAIALAAGTCQQL ARIGIWQTLAKRATPIQRVHVSDRGHAGFVNLAAADYGLSALGQVVELHDVGQRLFSLLR EAPGVTLHCPAKVEAVSRREESVSLTLEGGEIINGKLLVAADGSRSSLGAHCGISWQQQP YEQIAIIANVSTALPHEGRAFERFTEHGPLAMLPMSQGRCSLVWCHPQSRRDEVQSWSDE HFCQALQQAFGWRLGRITHAGKRSVYPLALTTATRAVSHRLALVGNAAQTLHPIAGQGFN LGLRDVMSLAEMLADAHVARDDVGDYSLLCRYQARRAGDKAATIGVTDGLVHLFANRWAP LVAGRNVGLMAMDLFTPARDALAQRTLGWVPR >gi|289775900|gb|GG745510.1| GENE 424 448641 - 449957 1769 438 aa, chain - ## HITS:1 COG:STM3058 KEGG:ns NR:ns ## COG: STM3058 COG0006 # Protein_GI_number: 16766359 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 437 1 437 438 792 87.0 0 MTQQEFLSRRQALLAQMQPGSAALIFAAPEAVRSADSEYPYRQNSDFWYFTGFNEPEALL VLIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQDAAPAKLGVDRALAFSEINQQLYQLLN GLDAIYFAQGEYAYADEIVFNALEKLRKGSRQNLQAPNSVIDWRPIVHEMRLFKSAEELA VMRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFNRHGARFPSYNTIVGGGENGCIL HYTENESELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFSKPQREIYDIVLESLETALE LYRPGTSIYEVNQEVVRIMITGLVRLGILKGEIDELIANNAHRPYFMHGLSHWLGLDVHD VGNYDTDRSRVLEPGMVLTVEPGLYIATDADVPAQYRGIGIRIEDDIVITEDGNENLTAS VVKKADEIEALMAAARQS >gi|289775900|gb|GG745510.1| GENE 425 449981 - 450541 786 186 aa, chain - ## HITS:1 COG:STM3059 KEGG:ns NR:ns ## COG: STM3059 COG3079 # Protein_GI_number: 16766360 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 186 9 194 194 333 88.0 1e-91 MPGYNDVDQLLNQQGVGLTPAEMHGLISGLLCGGNTDSSWLPLVHDLTNEGLAFGHELAQ ALRNMHSAISDSLDDDGFLFQLYLPEGDAVSVFDRADALAGWVNHFLLGLGVSQPKLDKV KDETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFSRQQPTAPEV RKPTLH >gi|289775900|gb|GG745510.1| GENE 426 450726 - 451055 162 109 aa, chain + ## HITS:1 COG:STM3060 KEGG:ns NR:ns ## COG: STM3060 COG3027 # Protein_GI_number: 16766361 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 157 89.0 4e-39 MSAQPVDLQIFGRSLRVNCPPEQRDALNQAAEDLNQRLQDLKERTRVTNTEQLVFIAALN ISYELTQEKAKTRDYASSMEQRIRMLQQTIEQALLEQGRISERPGSKFE >gi|289775900|gb|GG745510.1| GENE 427 451379 - 451975 660 198 aa, chain + ## HITS:1 COG:STM3061 KEGG:ns NR:ns ## COG: STM3061 COG0212 # Protein_GI_number: 16766362 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Salmonella typhimurium LT2 # 18 198 2 182 182 296 81.0 1e-80 MTLQPDIPLSRQHIRQQIRERRRALSPEQQRLFAQQAAERMMAWPPVILAHTVALFLSFD GELDTQPLIDQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIVNRLKIREPKLDVRDV LPLAELDVLVTPLVAFDVSGQRLGMGGGFYDRTLQNWQQYRLQPVGYAHDCQQVDSLPSE EWDIPLPAVITPGKTWCW >gi|289775900|gb|GG745510.1| GENE 428 452059 - 453291 1592 410 aa, chain - ## HITS:1 COG:ECs3784 KEGG:ns NR:ns ## COG: ECs3784 COG0111 # Protein_GI_number: 15833038 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 752 92.0 0 MAKVSLEKDKIKFLLVEGVHQKAIDSLRAAGYTNIEFHKGALDSEQLKASIRDAHFIGLR SRTHLTEEIFAAAEKLVAVGCFCIGTNQVDLNAAAKRGIPVFNAPFSNTRSVAELVIGEL LLLLRGVPEANAKAHRGVWNKLAVGSFEARGKKLGIIGYGHIGTQLGILAESLGMHVFFY DIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENASTKNMMGAEELALMKPGALLINASR GTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVILTPHIGGSTQEA QENIGLEVAGKLAKYSDNGSTLSAVNFPEVSLPLHGGRRLLHIHENRPGVLTAINQIFAA QSINIAAQYLQTSPQMGYVVIDIEAEEDVAQQALQAMKAIPGTIRARLLF >gi|289775900|gb|GG745510.1| GENE 429 453263 - 453454 79 63 aa, chain + ## HITS:1 COG:no KEGG:KP1_4636 NR:ns ## KEGG: KP1_4636 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 62 1 62 65 113 98.0 3e-24 MSFSSDTLAISPSCFVLTDVVLNESSSQQHIKKNYRGNMNVCVAVLKKCHPEGNDRTKHQ KED >gi|289775900|gb|GG745510.1| GENE 430 453561 - 454220 937 219 aa, chain - ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 375 94.0 1e-104 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGIPVFDLNSVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIADAS KQVDILGAFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGLEILDAV ALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK >gi|289775900|gb|GG745510.1| GENE 431 454388 - 455281 1120 297 aa, chain + ## HITS:1 COG:ECs3786 KEGG:ns NR:ns ## COG: ECs3786 COG0583 # Protein_GI_number: 15833040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 556 96.0 1e-158 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALANVLSDSPIR LNLQVEDETRTQERLRRGEVVGAVSIQPQALPSCLVDQLGALDYLFVASKEFAQRYFPNG VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI PHLQIEKELKSGELIDLTPGLFQRRMLYWHRFAPESRMMRRVTDALIDYGHKVLRQD >gi|289775900|gb|GG745510.1| GENE 432 455336 - 456103 843 255 aa, chain - ## HITS:1 COG:ECs3793 KEGG:ns NR:ns ## COG: ECs3793 COG2968 # Protein_GI_number: 15833047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 245 1 244 246 345 87.0 3e-95 MKLKVLALAAALGFSTMAAQANELPDGPHIVTSGTASVAAVPDIATLAIEVNVAAKDAAS AKKQADDRVAQYLSFLEKSGIAKKDISSANLRTQPDYDYQNGKSILKGYRAVRTVEVTLR QLDKLNGLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDDAVHQAQELAAGFHSKL GPVYSVRYHVSNYQPSPMVRMMKAADAAPVSAQETYEQATIQFDDQVDVVFELQPAQAAA PAAPAKPAEEPKPAQ >gi|289775900|gb|GG745510.1| GENE 433 456193 - 456828 887 211 aa, chain - ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 327 87.0 1e-89 MFTYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHLMIALLCAVSDLLLICAGIFGGSA LLMQSPWLLAIVTWGGVAFLLWYGFGALKTAFSQNLELASAEVMQQGRWKIIITMLAVTW LNPHVYLDTFVVLGSLGGQLAVEPKRWFALGTISASFLWFFGLALLAAWLAPRLRTAKAQ RIINIVVGAVMWFIAFQLAKEGVGHILALLN >gi|289775900|gb|GG745510.1| GENE 434 456980 - 457837 1336 285 aa, chain - ## HITS:1 COG:ECs3795 KEGG:ns NR:ns ## COG: ECs3795 COG0668 # Protein_GI_number: 15833049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 282 1 282 286 437 83.0 1e-122 MEDLNVVDSINNAGTWLARNQELLLSYAVNIVAAIVILVIGMIVARIVSNTVNRLMLARK IDATVADFLSALVRYAVIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA GVLLVMFRPFRAGEYVDLGGIAGTVQNVQIFSTTLRTADGKIVVVPNGKIIAGNIINFSR EPARRNEFIIGVSYDADIDKVKQLLTSIIESDDRILRDREMTVRLNELGASSVNFVVRVW SKSSDLQNVYWDVLERIKRDFDANGISFPYPQMDIHVVQLPEKAE >gi|289775900|gb|GG745510.1| GENE 435 458029 - 459108 1344 359 aa, chain - ## HITS:1 COG:STM3068 KEGG:ns NR:ns ## COG: STM3068 COG0191 # Protein_GI_number: 16766369 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 359 1 359 359 712 95.0 0 MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLEAAAKVRSPVIVQ FSNGGAAFIAGKGVKTDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWI DGLLDAGEKHFAATGKPLFSSHMIDLSEESLHENIEICSKYLARMAKMDMTLEIELGCTG GEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPT ILRDSQEYVSKKHNLPHNSLNFVFHGGSGSSAQEIKDSVSYGVVKMNIDTDTQWATWDGI LQYYKTNEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAAQTSMVTRLEQAFKELNAIDVL >gi|289775900|gb|GG745510.1| GENE 436 459206 - 460369 1447 387 aa, chain - ## HITS:1 COG:STM3069 KEGG:ns NR:ns ## COG: STM3069 COG0126 # Protein_GI_number: 16766370 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Salmonella typhimurium LT2 # 1 387 1 387 387 697 96.0 0 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHL GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVEVAAGELVVLENVRFNKGEKK DDEALSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKE PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLVD EAKRLLSTCDIPVPTDVRVATEFSETATATLKSVNDIKDDEQILDLGDVSAQKLADILKN AKTILWNGPVGVFEFPNFRKGTEIVANAIADSEGFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKVLPAVAMLEERAKQ >gi|289775900|gb|GG745510.1| GENE 437 460409 - 461437 1081 342 aa, chain - ## HITS:1 COG:ECs3798 KEGG:ns NR:ns ## COG: ECs3798 COG0057 # Protein_GI_number: 15833052 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 643 92.0 0 MTIRIAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGIAHLLKYDTSHGRFAWD VRQEREQLFVGDDAIRLLHEPTIAALPWRELAVDVVLDCTGVYGSREHGEAHLQAGAKKV LFSHPGGNDLDATVVYGVNQDELRAEHRIVSNASCTTNCIIPIIKLLDDAYGIESGTVTT IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTI NVTAIDLSVTVKKPVKACEVNQLLQKAAQGAFHGIVDYTELPLVSTDFNHDPHSAIVDGT QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAAIGFRFDA >gi|289775900|gb|GG745510.1| GENE 438 463635 - 464393 1061 252 aa, chain + ## HITS:1 COG:ECs3811 KEGG:ns NR:ns ## COG: ECs3811 COG0501 # Protein_GI_number: 15833065 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 252 43 294 294 418 87.0 1e-117 MKIRSTVLALGIAATLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACKEMDAKA KIAPASSEYSQRLSKIATALGDNINGQPVNYKVYETKDVNAFAMANGCIRVYSGLMDLMN DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRAAAASAGGIVGSLSQSQLGDLGEKLV NSQFSQRQESEADDYSYDLLRKRGINPSGLATSFEKLAKLEAGRQSSMFDDHPASEARAQ HIRDRMKADGIK >gi|289775900|gb|GG745510.1| GENE 439 464771 - 466039 1556 422 aa, chain + ## HITS:1 COG:no KEGG:KPK_0739 NR:ns ## KEGG: KPK_0739 # Name: oprD # Def: porin D (EC:3.4.21.-) # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 422 1 422 422 773 100.0 0 MKKELSLIALGIIAATPTFASQQSASQGFIDDSHLDLFLRNAYIKRDYRDGLPDKAEWGQ GIIATFESGFTQGPVGFGVDGIAQYAVRLDGGRGRSGAGGIDFFAQDDDGRAKSDLAKFG ATGKMRFSNTVLSYGSQRPMLPIVYADDSRLLYESYTGTMLTSREIDGLEINAGYLTDQQ RKSDDSHNSGLKSLTFGGASYRFNDQLSGALYASHVEDVLNKQYLGLNYKQPFAANQQLV LDFNGYNSRLDQEYADANDTGRSNSIWSLAASYIWDIHTFKVAYQQSSGSTGYHYGGYQN QGGVGDGGNTIWLANSYWSDFNGEDERSWQASYGLDFAGLGLPGLTWTTAYVRGDNIKTS ETSNGKEHEWFNQVQYQVQNGVAKDLKFRLRYSVLRVSSNASDYNVSGNEVRFYVEYPFN VF >gi|289775900|gb|GG745510.1| GENE 440 466171 - 467091 1245 306 aa, chain - ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 605 98.0 1e-173 MSTLGHQYDNSLVSNAFGFLRLPMNFMPYESDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRML SFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPNEGLIDPNH SVQIGIRTEFDKDNGFTVLDAGQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ AAKKGE >gi|289775900|gb|GG745510.1| GENE 441 467325 - 469223 2756 632 aa, chain - ## HITS:1 COG:ECs3814 KEGG:ns NR:ns ## COG: ECs3814 COG1166 # Protein_GI_number: 15833068 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Escherichia coli O157:H7 # 1 632 27 658 658 1256 95.0 0 MSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAELVKAREAQGQRL PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILRAAGHLESL QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC SVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTE ATPPAEDAARPLQSMWETWLEMHETGNRRSLREWLHDSQMDLHDIHIGYSSGTFNLQERA WAEQLYLNMCHEVQKQLDPSNRAHRPIIDELQERMADKIYVNFSLFQSMPDAWGIDQLFP VMPLEGLNKSPERRAVLLDITCDSDGAIDHYVDGDGIATTMPMPEYDPENPPMLGFFMVG AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPNTLLTQFRD QVKNTGLDDALQQQFLEEFEAGLYGYTYLEDE >gi|289775900|gb|GG745510.1| GENE 442 470143 - 471297 1629 384 aa, chain + ## HITS:1 COG:STM3090 KEGG:ns NR:ns ## COG: STM3090 COG0192 # Protein_GI_number: 16766391 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Salmonella typhimurium LT2 # 1 384 1 384 384 768 97.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTS AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQ GLMFGYATNETDVLMPAPVTYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVG IDAVVLSTQHAEDIDQKSLQEAVMEEIIKPTLPTEWLNASTKFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGH FGREHFPWEKTDKAALLREAAGLK >gi|289775900|gb|GG745510.1| GENE 443 471677 - 473071 2130 464 aa, chain + ## HITS:1 COG:STM3091 KEGG:ns NR:ns ## COG: STM3091 COG0477 # Protein_GI_number: 16766392 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 464 1 464 464 807 92.0 0 MPDNKKQGRSNKTMTFFVCFLAALAGLLFGLDIGVIAGALPFIANEFQISAHTQEWVVSS MMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEILLVSRVLLGLAVG VASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYSGAWRWMLGVIIIP AVLLLIGVIFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLKVKQSGWS LFKDNSNFRRAVFLGILLQVMQQFTGMNVIMYYAPKIFELAGYANTTEQMWGTVIVGLTN VLATFIAIGLVDRWGRKPTLILGFIVMAAGMGVLGSMMHIGIHSSTAQYIAVLMLLMFIV GFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNSLGSANTFWV YGGLNVLFILLTIWLIPETKNVSLEHIERNLMQGRPLREIGARD >gi|289775900|gb|GG745510.1| GENE 444 473191 - 473649 518 152 aa, chain + ## HITS:1 COG:sprT KEGG:ns NR:ns ## COG: sprT COG3091 # Protein_GI_number: 16130845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 151 15 165 165 247 83.0 6e-66 MRSLREHLAKANLKLERRYAEPTLVYQQRGTSAGTAWLEKNEIRLNPVLLLENQQEFIDE VVPHELAHLLVWQHFGRVAPHGKEWKWMMENVLGVPARRTHRFELDSVRQNTFPYRCRCQ QHQLTVRRHNRVVRGEATYRCVHCGDLLVAEK >gi|289775900|gb|GG745510.1| GENE 445 473744 - 474451 868 235 aa, chain + ## HITS:1 COG:ECs3821 KEGG:ns NR:ns ## COG: ECs3821 COG2356 # Protein_GI_number: 15833075 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 390 85.0 1e-108 MSRMHILAVAVLSTAVSGPLAAAGINSFSQAKAAGVKVNADVPGDFYCGCKIDWQGKKGV IDLESCGYKVRKNENRASRVEWEHVVPAWQFGHQRQCWQEGGRQNCAKDPEYRKMESDMH NLQPAVGEVNGDRGNFMYSQWNGGEGQYGQCTMKVDFKDKVAEPPARARGAIARTYFYMR DRYQLNLSRQQTQLFTAWDKQYPVTAWECERDERIAKVQGNHNPYVQQACQAQKS >gi|289775900|gb|GG745510.1| GENE 446 474543 - 475274 698 243 aa, chain + ## HITS:1 COG:STM3094 KEGG:ns NR:ns ## COG: STM3094 COG1385 # Protein_GI_number: 16766395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 243 17 259 259 415 86.0 1e-116 MRIPRIHHPERLTVGSQIALSDDAANHVGRVLRMTAGQHLQLFDGSNQVFDAVITEAGKK NVTVEVLSGEPDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD AERLQKKIQQWQKIAIAACEQSGRNVVPEIRPAMQLEEWCAEQDSGMKLNLHPRASASIN TLPLPVERVRLLIGPEGGLSAEEIAMTAQYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|289775900|gb|GG745510.1| GENE 447 475295 - 476245 340 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 311 6 319 345 135 31 4e-30 MIKLGIVMDPIATINIKKDTSFAMLLEAQRRGYELHYMEMNDLYLINGEARARTRTLSVE QNYDKWYDFTGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLR DCNEKLFTAWFSELTPETLVTRNKAQLKAFWEKHGDIIMKPLDGMGGASIFRVKAGDPNL GVITETLTELGSRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGG RGEARPLTESDWEIARRVGPTLKAKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPDI SITGMLMDAIERRITK >gi|289775900|gb|GG745510.1| GENE 448 476419 - 476982 733 187 aa, chain + ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 187 25 211 211 340 88.0 8e-94 MNLQHHFLIAMPALQDPIFRRSVVYICEYNDEGAMGIIINKPLENLQVEGILEKLKIVPE PRNPEIRLDKPVMLGGPLAEDRGFILHTPPSDFSSSIRISDNTVVTTSRDVLETLGTDRQ PGNVLVALGYSSWEKGQLEQEILDNAWLTAPADQNILFRTPIADRWREAAKLIGIDIVTM PGDAGHA >gi|289775900|gb|GG745510.1| GENE 449 476982 - 477398 431 138 aa, chain + ## HITS:1 COG:yqgF KEGG:ns NR:ns ## COG: yqgF COG0816 # Protein_GI_number: 16130850 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli K12 # 1 138 1 138 138 247 84.0 5e-66 MSGTFLGFDFGTKSIGVAVGQRITATARPLPALKAQDGKPDWNVIEKLLKEWQPEAVIVG LPLNMDGTEQPLTARARNFANKIHGRFGVAIVLHDERLSTVEARAGLFEHGGYRALNKGS VDSASAVVILESYFEQSF >gi|289775900|gb|GG745510.1| GENE 450 477451 - 478104 429 217 aa, chain - ## HITS:1 COG:ECs1417 KEGG:ns NR:ns ## COG: ECs1417 COG2771 # Protein_GI_number: 15830671 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 16 216 15 215 216 156 41.0 3e-38 MINLNGNSSSSRQVTFITHPSIQSKAFASYLSETLMASVVLQNINKPLAQRLAKDSVILF DIAVSNKKLNGVWRDIIRLQADNPRLLIINSAQKYELYEMAQWPALYGVFRHDDDESRLI EGVKAVLNGEQTAELSVMHPAMYAADHASAPVENSPLTERECEILNELRCGATNLDIARA LFISENTVRTHLYNVFRKLSVKNRTQAVSWANEHLRH >gi|289775900|gb|GG745510.1| GENE 451 478453 - 479433 730 326 aa, chain - ## HITS:1 COG:ECs3827 KEGG:ns NR:ns ## COG: ECs3827 COG2805 # Protein_GI_number: 15833080 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli O157:H7 # 1 326 16 341 341 435 70.0 1e-122 MKLEEIVALSVKHNVSDLHLCNSAAPRWRRQGKLEPAPFPAPDIPDLLHCWLDAAQLQHW QEQGQIDFALTLACGLRLRASAFAHTRGISLVLRLLPEQCPRLETLGAPPALSELLAEES GLLLVTGATGSGKSTTLAAMVGHLNQRLDGHILTLEDPVEFIHHSERCLILQREIGRHCP SFAAALRVALRQDPDVILLGELRDSETIRLALTAAETGHLVMATLHTRGAAPAVERLIDV FPAEEKDQVRSQLAGSLCAVLAQKLLPARQGGRVALYELLVNTPAVANLIREGKVHQLPG IMQTGMQAGMLTFTQSFQQRVAAGEL >gi|289775900|gb|GG745510.1| GENE 452 479450 - 480151 528 233 aa, chain + ## HITS:1 COG:ECs3826 KEGG:ns NR:ns ## COG: ECs3826 COG0325 # Protein_GI_number: 15833081 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Escherichia coli O157:H7 # 1 233 1 233 234 394 85.0 1e-110 MNDIAHNLAQVRDKISGAAARCGRAPEEVTLLAVSKTKPASAIEEAIVAGQRAFGENYVQ EGVEKINHFQQAGISGLQWHFIGPLQSNKSRLVAEHFDWCHTVDRLKIATRLNEQRPAHL PPLKVLIQINISDEQSKSGIPLEALDGLAAEIAELPHLELRGLMAIPAPESEYVRQFAVA QQMAVAFARLKTRYPTVDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSK >gi|289775900|gb|GG745510.1| GENE 453 480172 - 480738 868 188 aa, chain + ## HITS:1 COG:ECs3828 KEGG:ns NR:ns ## COG: ECs3828 COG0762 # Protein_GI_number: 15833082 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 249 87.0 2e-66 MKTLTFLLSTVIELYTMVVLLRVWMQWARCDFYNPFSQFVVKATQPIVGPLRRIIPAMGP IDSASLLVAFILCVIKAIVLFMVITFQPIIWISALLILLKTIGSLIFWVLLLMAIMSWVS QGRSPVEYVLMQLADPLLRPIRNLLPSMGGIDFSPMVLVLLLYVINMGVAEVLQATGNVL LPGLWMAL >gi|289775900|gb|GG745510.1| GENE 454 480735 - 481025 217 96 aa, chain + ## HITS:1 COG:STM3102 KEGG:ns NR:ns ## COG: STM3102 COG1872 # Protein_GI_number: 16766403 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 96 1 96 96 152 83.0 2e-37 MSAVETCAEGLVLRLYIQPKASRDSIVGVHGDELKVAITAPPVDGQANAHLVKFLAKQFR VAKSQVLIEKGELGRHKQVKIIAPQQIPTAVAALTE >gi|289775900|gb|GG745510.1| GENE 455 481038 - 481631 947 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|24114209|ref|NP_708719.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella flexneri 2a str. 301] # 1 197 1 197 197 369 92 1e-100 MQKVVLATGNAGKVRELASLLEDFGLDIVAQTELGVDSAEETGLTFIENAILKARHAAQI TGLPAIADDSGLAVDALGGAPGIYSARYSGVDATDQQNLEKLLDALKDVPDDQRQAQFHC VLVYLRHAEDPTPLVCHGSWPGIITRQAAGTGGFGYDPIFFVPSEGKTAAELSREEKSAI SHRGQALKLLLEALRNG >gi|289775900|gb|GG745510.1| GENE 456 481624 - 482760 1467 378 aa, chain + ## HITS:1 COG:STM3104 KEGG:ns NR:ns ## COG: STM3104 COG0635 # Protein_GI_number: 16766405 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 378 1 378 378 705 89.0 0 MANLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIG TIFIGGGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNR ISIGVQSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDL RQAIALNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLSAAGYQQYETSA YAKPDFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQH DVEEADKPFEFFMNRFRLLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQNWQI TEHGKLFLNSLLELFLNE >gi|289775900|gb|GG745510.1| GENE 457 482801 - 483517 1058 238 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0691 NR:ns ## KEGG: Kvar_0691 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 238 1 238 238 434 100.0 1e-120 MRKTLLAVALSVTALSAHADYQCSVTPRDDVILSPQQVQVKGENGNLVIKPDGNLTFNGK TYTLSAAQREQAQDYQASLRSSLPWIDEGARSRVEKGRKALDKIITEQVGANSSMHGRLT KLDAQLKEQMNRIIERRSDGLTFHYKAIDQVRADGQQLVNQAMGGILQDSINEMGAKAVL KGGGNPLQGILGSLGGLQTAIQDEWKNQEADFQQFGKDVCSRVVSLEDSRKSLVGSLK >gi|289775900|gb|GG745510.1| GENE 458 483571 - 483897 544 108 aa, chain - ## HITS:1 COG:STM3108 KEGG:ns NR:ns ## COG: STM3108 COG3171 # Protein_GI_number: 16766409 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 108 1 108 108 189 89.0 1e-48 MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTTEEQIDQTVNDLIEEVIEPNKLAFDGS GYLSWEGLICMQEIGKCTEEHQAIVRQWLEARKLEDVRTSELFDVWWD >gi|289775900|gb|GG745510.1| GENE 459 483897 - 484616 875 239 aa, chain - ## HITS:1 COG:STM3109 KEGG:ns NR:ns ## COG: STM3109 COG0220 # Protein_GI_number: 16766410 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 456 91.0 1e-128 MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQQHALDNIWPVMGVEFNDAPLDFAALF GRDAPVTLEIGFGMGASLVAMAKAKPEQNFLGIEVHSPGVGACLASAEEEGVQNLRVMCH DAVEVLHTMIPDNSLNMVQLFFPDPWHKARHNKRRIVQPPFAELVKSKLKLGGVFHMATD WEAYAVHMLEVMSSLEGYRNQSASNDYVPRPESRPVTKFEQRGHRLGHGVWDLMFERVK >gi|289775900|gb|GG745510.1| GENE 460 484705 - 485811 1083 368 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 15 361 2 366 378 421 57 1e-116 MCCNLPPCNRDPGAIALTFLAAQFSAQVLDWYDKYGRKTLPWQIAKTPYKVWLSEVMLQQ TQVTTVIPYFERFMARFPTVVDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATQHGG IFPQSFEEVAALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLARCYAVSGWPGKKEVEK RLWDISEEVTPAQGVERFNQAMMDLGAMVCTRSKPKCELCPLSNGCVAYANHSWAEYPGK KPKQTIPERTGYFLLMQHGDEVFLSQRPPVGLWGGLFCFPQFADEAELREWLAQRQIKAD NLTQLTAFRHTFSHFHLDIVPMWLTVHSSGACMDEGNALWYNLAQPPSVGLAAPVERLLQ QLKAGTPV >gi|289775900|gb|GG745510.1| GENE 461 485840 - 486115 431 91 aa, chain + ## HITS:1 COG:STM3111 KEGG:ns NR:ns ## COG: STM3111 COG2924 # Protein_GI_number: 16766412 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 155 87.0 2e-38 MSRTIFCTFLQREADGQDFQLYPGELGKRIYNEISKEAWALWQHKQTMLINEKKLSMMNP EHRKLLEQEMVQFLFEGKDVHIEGYTPPEKQ >gi|289775900|gb|GG745510.1| GENE 462 486161 - 487246 1250 361 aa, chain + ## HITS:1 COG:STM3112 KEGG:ns NR:ns ## COG: STM3112 COG0741 # Protein_GI_number: 16766413 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 361 1 361 361 641 86.0 0 MMKKYLALALIAPLLVSCSSSNKKGTEYNEAWVKDTNGFDILMGQFAHNIENIWGYNEVL LAGPKDYVKYTDQYQTRSHINFDAGTITVETIAGTDPRGRLRQAIIKTLLMGDDPNSIDL YSDVDDIQISKEPFLYGQVVDNTGASIRWEWRAARYADYLLQTRLKSRNNGLRVIYSITI NLVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSHADAMGLMQVVQ HSAGKDVFRSQGKSGLPSRSYLFDPANNIDTGTAYLAMLNNVYLAGIDNPTSRRYAVITA YNGGAGSVLRVFSSDKVQAANIINSMAPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRR K >gi|289775900|gb|GG745510.1| GENE 463 487438 - 488691 1941 417 aa, chain + ## HITS:1 COG:STM3113 KEGG:ns NR:ns ## COG: STM3113 COG0477 # Protein_GI_number: 16766414 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 417 1 417 418 696 91.0 0 MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGAAIGAVYSSLGIAAVLMPTLLGI VADKWISAKWVYAICHLVGALTLYLAAQVTTPGEMFLVILLNSLAYMPTLGLINTISYYR LQSAGLDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHMQLYIGATLSVLLALFTLTLP HIPVANAQRNQSWTEMLGLNAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFAGSFIVEHASVLMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAF GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCIL GGMVSGKVVEHFTVEGITDWQSVWLIFAGYSLVLAFAFVALFKYKHVRQPTAAQQSA >gi|289775900|gb|GG745510.1| GENE 464 488735 - 490864 2615 709 aa, chain - ## HITS:1 COG:STM3114 KEGG:ns NR:ns ## COG: STM3114 COG1982 # Protein_GI_number: 16766415 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 708 4 711 711 1307 86.0 0 MHIAASCELVTRLSTHRRVVALDSTDFTDVAAVVITAADSRSGILALLRRSGFNLPVYLL SETAVERPEGVQAVIAGKDQEWLELEAAACDYEARLLPPFFNTLTQYVEMDNSTFACPGH QHGAFFKKHPAGRQFYDFFGENVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFNADK TYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNPFGF IGGIDERCFDEHYLRDLIREAAPEKANASRPFRLAVIQLGTYDGTVYNARQVVDKIGHLC DYILFDSAWVGYEQFIPMMADCSPLLLELTPDDPGIFVTQSVHKQQAGFSQTSQIHKKDN HLRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVALGIEA RKAIIANCKMIQPFIPPVVAGRPWQDHPTEAIARERRFFSFEPDARWHGFEGYADDQYFV DPCKLLLTTPGIDAESGEYSEFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAESAEK MAQLVAMLGQFEQHIESDTPLADVLPTIYNKYPVRYRDYTLRELCQEMHDLYVSFDVKSL QKEMFRKRSFPRVVMNPQDANREFIRGNVELVRLSEAEGRVAAEGALPYPPGVLCVVPGE IWGGAVLRYFLALEEGVNMLPGFSPELQGVYSETDPDGIKRLYGYVLKG >gi|289775900|gb|GG745510.1| GENE 465 491293 - 492006 674 237 aa, chain + ## HITS:1 COG:STM3115 KEGG:ns NR:ns ## COG: STM3115 COG1811 # Protein_GI_number: 16766416 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Salmonella typhimurium LT2 # 1 237 1 235 235 297 78.0 1e-80 MVTGPFINASAVLVGGVLGALLSQRLPERIRTSMTSIFGLASLGIGILLVIKCANLPVMV LSTLVGTLLGEICNMEKGINTLVSKLQQLMSAKGKKKASAHESYIQSYVAIIVLFCASGT GVFGAMREGMTGDASILIAKAFLDFFTATIFACTLGIAVAAISVPMLLIQLTLAACAAII MPLTTPMMLADFSAVGGMLLVATGLRICGIKMFAVVNMLPALVLAMPISAAWTLFFA >gi|289775900|gb|GG745510.1| GENE 466 492411 - 492851 116 146 aa, chain - ## HITS:1 COG:YPO0961 KEGG:ns NR:ns ## COG: YPO0961 COG0582 # Protein_GI_number: 16121264 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 50 142 2 93 102 107 60.0 9e-24 MVPVEERWIDLNIEGAKYHREHRVPIVSSLYPSLEELVRKAGEAGMEPGDQVFNVGWFDL MRKRKYPEVMNEYPLRAFFRRLSRECKFTITPHRFRHTVATHMMKSPERNLYAVKKLLGH VSITSTLEYIDESVDSLRDILETELM >gi|289775900|gb|GG745510.1| GENE 467 493599 - 493874 164 91 aa, chain - ## HITS:1 COG:no KEGG:PMI0321 NR:ns ## KEGG: PMI0321 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 1 69 17 85 89 73 63.0 2e-12 MVTRKRKLVAPESPFFQVPETTQVHEDGSTESVVRGRNGKKVTFTTPKGQKISASKGEVF NVLLNSAKSTRQPRPISEGICDLTRYELLSK >gi|289775900|gb|GG745510.1| GENE 468 493926 - 494354 177 142 aa, chain - ## HITS:1 COG:no KEGG:PMI0320 NR:ns ## KEGG: PMI0320 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 2 142 53 192 192 210 67.0 2e-53 MPEERQLPWDQIGAMLRDDNAFNFCFKLLDARHRPAGACICEYCPGDGVLNVEMLQNFQI QPSILDGNMLKFALYAIVLFLLETEGSGVRLMFPINQVVAAYYVEEHGFLDITDDGSRDI LYRSAADLVDWFRRDAALVDGE >gi|289775900|gb|GG745510.1| GENE 469 494551 - 494841 237 96 aa, chain - ## HITS:1 COG:no KEGG:ECED1_3573 NR:ns ## KEGG: ECED1_3573 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 96 160 255 255 130 66.0 1e-29 MRVTILVLSVPLFILVAIEEIADGMVRRDLRRYGAVYESSFLYHHAKRVVKPVAYIPCVL YLSALFAVYPNLLLLPAALLMGLAISVTMGSFKKYL >gi|289775900|gb|GG745510.1| GENE 470 495350 - 496498 426 382 aa, chain - ## HITS:1 COG:YPO0397 KEGG:ns NR:ns ## COG: YPO0397 COG4924 # Protein_GI_number: 16120731 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 378 1 378 384 475 62.0 1e-134 MYSPDELREKLARQWDNAKLRAERLLPPGNWPLCLTIGKPSAKIFAEQPQRVLQHVQLWR QVAVGRVEWEEVSYRASDGPVSMPLRWIMNGPSDWINAAADATVSREFRLLEGIIEQVDP IFHPLLISHRSLWRNKGSQDIISAARLASRLEPGCAKGLPLRLLSGQGVDTKFIENNISL LTRLLDMRFSGEASEQGLTTFLDAFDESSHWVLVVPLSPGLLPFKKCRVTTAELAETTLP ASRVLMIENEQCLHQLPELSDTIAVLGCGLDVQWLSSVVLDKKRVAYWGDMDSWGLLMLA RARRCRPTLDVLLMNRELFEQYASQSAVPEPVKAQEAIPDGLLNEEGDFYRYLTCLPRGR LEQEFLPAGVVGEELVRWRKES >gi|289775900|gb|GG745510.1| GENE 471 496499 - 499789 2092 1096 aa, chain - ## HITS:1 COG:YPO0396 KEGG:ns NR:ns ## COG: YPO0396 COG4913 # Protein_GI_number: 16120730 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 649 1096 22 469 470 528 65.0 1e-149 MNQIARLAEKESFILTRIELFNWGGFHGLHQAAIHQEGTAVIGPTGSGKTTLVDALMTLL CANPRYNLASTGGHESDRDLISYVRGVSGPGDGGEGQSHIARPGKTVTGIAATLEREGQQ VRLGALLWFDSTSSSAADLKKLWMFSDNPTQTLDHWLNIWHDGGARSLKQMEKETTGIWI WLNNKKQYLARLRDFFEVGENAFTLLNRAAGLKQLNSIDEIFRELVLDDHSAFDRATEVA NSFDGLTEIHQELETARKQQQSLQPVALSWDKYQKQEQQLADRKALESLLPIWFAQQASQ LWREKVSHIEVELGESQTREEQIQSQLELQKKVVTDCLQRYLQVGGANIDELNERIKDWQ KTLGSREILAHQYQQLTRNLGLPPDLSQPQLEANQHEAEARCEQFADDIKLKQEDVYQKG VLSHRMTEELRERETERAEIARRPDSNLPAHYQAFRSELAEALNVDESELPFVAELIQVK PEEAQWRGAIERAVGSNRLRILVAPESAQEALRWVNQRNNRLHVRLLEVKLPHSPARFFD DGFTRKLLWKDHPWREAVKALLAENDRHCVDSPEQLRDTPHAMTVQGLMSGKQRFYDKHD QKRLDEDWLTGFDNRDRLNFLAKEIAALQEQVKTANAAFEFAKGEVGVLQNQAISFQKIQ QIDYDSIDVPGAKSQLDALRERLENLIRPDSDASVAKAKLDEAQTVESELDKQLRAANKV TNGLDTELTSARAAERKAQQTAQKGMQDEERELCASHFPVVALVQLPDIRDLERQHERGI QQEIEGIKGELHRLNIELTKRMSEAKRVDTGELVEAGADLDDIPVYLQRLQELTEEALPE KLNRFLDYLNRSSDDGVTQLLSHIDHEVLVIEARLSELNETMFRVDFQPDRYLRLDTKKV VHESLRTLEKAQRQLNAARFVDDNGESHYKALQVLVAQLRDACERNRTLGAKALLDPRFR LEFAVSVMDRQSGNVIESRTGSQGGSGGEKEIIASYVLTASLSYALCPAGSRYPLFGTIV LDEAFSRSSHAVAGRIIAALREFGLHAVFITPNKEMRLLRDHTRSAIVVHRRGQDSNMAS LSWEELEQHSRRRENA >gi|289775900|gb|GG745510.1| GENE 472 499786 - 500535 442 249 aa, chain - ## HITS:1 COG:no KEGG:CJA_1586 NR:ns ## KEGG: CJA_1586 # Name: not_defined # Def: hypothetical protein # Organism: C.japonicus # Pathway: not_defined # 1 248 1 247 253 280 63.0 6e-74 MAGFFDKLINRSVAANAGSEPETSDEEITDELVEDSAASGETRTLKKIREAIQELLKYGL LEEASKPNLYRVVLTHPEEVTRILEPLDLDIGIDEIRGLLYVKVRLDETPEQDEWSHPLV RRQRLNLEQSLLVAILRQHFVAWEQESGTGASQAQIAIDDLLPQLQIYLGDPGSESKERT RLLTLVDQLKGHGLVTSPDAHERIVIRPIIAHLADPMNLQALLAWLWEQITQQTSPDDSS AKESSEEDV >gi|289775900|gb|GG745510.1| GENE 473 500541 - 502037 861 498 aa, chain - ## HITS:1 COG:no KEGG:PA14_03250 NR:ns ## KEGG: PA14_03250 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_PA14 # Pathway: not_defined # 1 498 40 537 538 649 70.0 0 MEENTRQRTENYISAKNQHPAWILLASRRAPLVLSCLKTLFEKAHDGIPLEDAIQSLSGI LIEHVSQEQYDINQDNPSLQASRELREWIKRRLIVERDGRIFATDALEVAITFVESLDNR FMTSTASRLSTVQREIENLETRLNPNPANRVATLRRRIAELERELQEAEAGHIEVLETHQ AVEHIREVFNLASSLRADFRRVEDSWREADRALRQSIIGEQYHRGDIVERLLNDQDALLN TPEGRVFDSFQQQLRQSVELTAMSERLRVILSHPSASNALNRLQRHDLRWLVKRLVDESQ TVLQARARSERDVRGFMKTGLAAEHHRVGHLLNEFLNLALKLDWQRQMIRKQEVPLPAVG VAVTGVPAIERLRFKEVDDEAEQTLDLSNHATDLTQIGDDFWDAFNGLDREALIQQTLQL LAKENRPVGLAELAALLPPAHDLETFAVWIGMAREAGIEVIDSQREFAELSDGEGRRWRF NLPTTGLESQALMDIDWE >gi|289775900|gb|GG745510.1| GENE 474 502910 - 504280 1471 456 aa, chain + ## HITS:1 COG:PA0399_1 KEGG:ns NR:ns ## COG: PA0399_1 COG0031 # Protein_GI_number: 15595596 # Func_class: E Amino acid transport and metabolism # Function: Cysteine synthase # Organism: Pseudomonas aeruginosa # 6 322 8 324 325 421 63.0 1e-117 MSLFHSVSDLIGHTPLLQLHKLDTGPCSLFLKLENQNPGGSIKDRVALSMINEAERQGKL APGGTIIEATAGNTGLGLALIAAQKNYRLILVVPDKMSREKIFHLRALGATVLLTRSDVN KGHPAYYQDYARRLADETPGAFYIDQFNNDANPLAHATSTAPELYQQLEGDIDAVVVGVG SGGTLGGLQAWFAEHSPKTEFILADPAGSILADQVDTGRYGETGSWLVEGIGEDFIPPLA RLEGVHTAYRVSDREAFQTARQLLQVEGVLAGSSTGTLLSAALRYCRAQSRPKRVVTFAC DSGNKYLSKMFNDDWMRQQGLIARPEQGDLSDFIALRHDEGATVTAAPDDTLAAVFTRMR LYDISQLPVLEDGHVVGIVDEWDLIRNVQGDRQRFSLPVSEAMSRHVETLDKRAPESELQ AILDRGLVAVIADNARFLGLVTRSDVLTAWRNRVAQ >gi|289775900|gb|GG745510.1| GENE 475 504292 - 505440 1398 382 aa, chain + ## HITS:1 COG:mll4503 KEGG:ns NR:ns ## COG: mll4503 COG0626 # Protein_GI_number: 13473790 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Mesorhizobium loti # 3 379 15 392 394 465 61.0 1e-131 MSSIHTLSVHSGTFTDSHGAVMPPIYATSTFAQPAPGQHTGYEYSRSGNPTRHALETAIA DLENGTRGYAFASGLAAISTVLELLDKDSHLVAVDDVYGGTYRLLENVRRRSAGLQVSWV KPDDLKGIEAAIRPDTRMIWVETPTNPLLKLADLSAIAAIARRHNLISVADNTFASPAIH RPLEHGFDIVVHSATKYLNGHSDVVAGLAVVGDNSELAEKLGYLQNAVGGVLDPFSSFLT LRGIRTLALRMERHSANALQLAEWLEQQPEVERVWFPWLASHPHHQLARQQMALPGGMIS VVVKGDEGYAERIISKLRWFTLAESLGGVESLVSQPFSMTHASIPLEKRLANGITPQLIR LSVGIEDPNDLIADWQQALREE >gi|289775900|gb|GG745510.1| GENE 476 505441 - 506352 1263 303 aa, chain - ## HITS:1 COG:RSc3332 KEGG:ns NR:ns ## COG: RSc3332 COG0583 # Protein_GI_number: 17548049 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 297 1 298 298 380 67.0 1e-105 MDKLRGMETFIAVVECGSFTGAASRLGLSAVMVGKYIAQLESQLATRLLERNTRRQSLTD AGRVYFDEAKRVMEQVSIAESAVERLRLAPAGTLRVSAPTSFGASVIAPLTATFLQAWPA VRVELDLTNRMVDLVDEGVDLAIRIGEIHQEDLVARYLAPYRMVICAAPAYLARYGTPGT PEDLADHLCLSHTVWTARNEWRLPGMEGEVRWKRDAILRCNDGYALRQAAIAGAGLLMQP EVLLADALASGSLVRVLEAWTPQPRPVHLLWRQDRRPLPKLTQFIAHLQQGMADALTMTR ASE >gi|289775900|gb|GG745510.1| GENE 477 506450 - 507052 884 200 aa, chain + ## HITS:1 COG:RSc3331 KEGG:ns NR:ns ## COG: RSc3331 COG1028 # Protein_GI_number: 17548048 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 199 1 201 201 268 76.0 4e-72 MKIIVIGASGTIGRAVSEELSQRHDVIRVGRTRGDYQVDITSQESVEALFAQTGEVDAIV STTGNLHFGPLSTMTDRQFNLGLQDKLLGQIRLALIGQHFLRDGGSITLVSGIVAQEPIA QGVNATTVNAGLEGFVRAAACELPRGIRINLISPTVLSESLAAYGDFFPGFASVPAAAVA QAYRRSIEGVQTGRIYPVGY >gi|289775900|gb|GG745510.1| GENE 478 507139 - 507483 183 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0678 NR:ns ## KEGG: Kvar_0678 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 205 100.0 4e-52 MLKKLPFIIPLLALIALLVWWFTPHYTADEEAYYRAVFCMIDHDDSRQFLHDMQNIVEGG NSDYALHKTHYLPALGQRMLDTWRQLSAQEQQTLGEDRQRCGEILREKQQGKSS >gi|289775900|gb|GG745510.1| GENE 479 507682 - 507870 155 62 aa, chain + ## HITS:1 COG:no KEGG:KP1_4689 NR:ns ## KEGG: KP1_4689 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 62 21 82 82 106 91.0 3e-22 MPVIIASSIKEANALINGGKYREIILNFDIDADDFFSLASHSAGTKISISDRNDRSPVKS EK >gi|289775900|gb|GG745510.1| GENE 480 507891 - 507980 90 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWLFIGTFAVAFLASLMLVWLDDRIAETD >gi|289775900|gb|GG745510.1| GENE 481 508067 - 509248 1658 393 aa, chain - ## HITS:1 COG:PAB2227 KEGG:ns NR:ns ## COG: PAB2227 COG1167 # Protein_GI_number: 14520410 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pyrococcus abyssi # 3 393 13 404 410 306 41.0 5e-83 MHDRRLAARAGELKPSAVRELLKHSKLPGVISLGGGIPAPELFDTEGLELAVQKVMSERF HDAFQYGLTEGYPPLRQAVSEICHSRGVTCSPAQVYITSGSQQSLDIVARTLLDPGDTIV VERPTYLAALQVFQLAQANILSVDTDDDGMLVEQLADLLETTRVKAVYLVPTFGNPGGKT LSETRRRRLVELAKKYDFVILEDDPYGEISFTDAVRRPLYQHAVELGCEDQVVYTSTFSK ILAPGMRIGWVVMPDWLAQQTVIVKQAADLHTNMLSQVITAEYLGMNRLENQIALIREDY RKKCVALADALESRLGEHLEFSRPQGGMFLWARFRYPFDTMEWMKKTLENGVVYVPGEAF YHDKPDTRTLRLSYSTVSEAGLLTAVERLAASL >gi|289775900|gb|GG745510.1| GENE 482 509394 - 511259 2346 621 aa, chain - ## HITS:1 COG:STM3139_2 KEGG:ns NR:ns ## COG: STM3139_2 COG0754 # Protein_GI_number: 16766439 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Salmonella typhimurium LT2 # 233 618 1 386 387 738 87.0 0 MSKGSTSSDAPFGTLLGYAPGGVAIYSSNYSSLNPQDYPDDATFRSYIGNEYMGHKWQCV EFARRFLFLTYGFVFTDVGMAYEIFSLRFLREVVNDNILPLQAFANGSRRPPIAGSLLIW QKGGEFKHTGHVAVITQLVGNKVRIAEQNVIHSPLPQGQQWTRELTLEVNAGRYTIKDTF TDTEILGWMIQTADTEHSLPQPVLPGEAMAIKGARLPNNGQFRGKWLNEKDPLQKAYVAA NGHFINQDPYQYFTISESAEQELIKATNELHLMYLHATDKVMKDDNLLALFDIPKILWPR LRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEGGLILEQWLKQGYYGTGHN PAEGLLDELAGAWKHSRARPFVHIMQDKDLEENYHAKFIQRSLTQAGFESKILFGLDELR WDAAGQLIDADGRLVNCVWKTWAWETAIEQVREVSADEYAAVPIRTGHPQNEVRLIDVLL RPEVLVFEPLWTVIPGNKAILPVLWSLFPHHRYLLDTDFVVNDELAKTGYAVKPISGRCG NNIDLIGPQDEVLDKTSGQFVDRKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGD SSLVVKKESDIEPLIVLKDKA >gi|289775900|gb|GG745510.1| GENE 483 511479 - 512039 811 186 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0674 NR:ns ## KEGG: Kvar_0674 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 186 1 186 186 389 100.0 1e-107 MSTPSHLNAQPLVWGHGPRTFEVFLEPTCPYSVRAFNKLDDLLDEVGADNVTIKIRLQSQ PWHLFSGVIVRCILAASTLPHGREQAHKVMQAVADHREEFEFIDHCSGPNMNATPQQIIE RIERYSHVLLGAAFARPELQDVIKWHSKYARQNGIHVSPTFMVNGLVQPDLGSGDDVSVW AARIMA >gi|289775900|gb|GG745510.1| GENE 484 512087 - 512953 1078 288 aa, chain + ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 288 17 304 304 509 82.0 1e-144 MSEQNYQPPKVWEWKQNSGGAFANINRPVSGATHERVLPVGTHPLQLYSLGTPNGQKVTI MLEELLALGVSGAEYDAWLIRIGEGDQFSSGFVDINPNSKIPALSDHSTTPPTRVFESGN ILLYLAEKFGFFLPKDPAGRTETLNWLFWLQGAAPFLGGGFGHFYNYAPVKIEYAIDRFT MEAKRQLDVLDKQLARGRYVAGEEYTIADMAVWPWYGNVVLGNVYNAAEFLDAGSYKNVL RWAQDVGNRPAVKRGRIVNRTNGPLNEQLHERHDARDFDTQTEDKRQA >gi|289775900|gb|GG745510.1| GENE 485 513026 - 513313 400 95 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0672 NR:ns ## KEGG: Kvar_0672 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 95 1 95 95 168 100.0 7e-41 MENHFGKGLMAGLQASYADTAAHAANFCADYKRGFVLGYSHRMFEKTGDRQLSAWEAGIL TRRYGLDRDMVMDFFKEGGSGMAMRYFLAGYRLES >gi|289775900|gb|GG745510.1| GENE 486 513392 - 514279 924 295 aa, chain - ## HITS:1 COG:Z4353 KEGG:ns NR:ns ## COG: Z4353 COG0412 # Protein_GI_number: 15803544 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 1 294 14 307 308 489 81.0 1e-138 MTRLTAKDFPQQLLEYYDYYAHGKISKREFLQLAGKYTVGGMTALALFNLLKPDYALAEQ VLFTDPDIRPEYIHYPSPDGHGEVRAYLVTPTKIADKAPAVVVVHENRGLNPYIEDVARR VAKAGYIALAPDGLSAVGGYPGNDDEGRALQQKVDPVKLMNDFFAAVAFMAKHPQATGKV GITGFCYGGGVSNAAAVAIPELACAVPFYGRQPPLKEVDKIKAPLLLHYASLDSGINEGW PAYEQALKEHHKVYEAYLYQGVNHGFHNDSTPRYDRAAADLAWQRTLAWFEKYLR >gi|289775900|gb|GG745510.1| GENE 487 514402 - 514896 750 164 aa, chain - ## HITS:1 COG:ECs3886 KEGG:ns NR:ns ## COG: ECs3886 COG2862 # Protein_GI_number: 15833140 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 250 89.0 6e-67 MERFLENAMYTSRWLLAPVYFGLSLGLVALTIKFFQEIVHVLPHIFSVSESELILTLLSL VDMTLVGGLLVMVMFSGYENFVSQLDINEGKEKLSWLGKMDATSLKNKVAASIVAISSIH LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLNKVKH >gi|289775900|gb|GG745510.1| GENE 488 515037 - 515462 641 141 aa, chain - ## HITS:1 COG:ECs3889 KEGG:ns NR:ns ## COG: ECs3889 COG0848 # Protein_GI_number: 15833143 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 231 87.0 4e-61 MAMRLNENLDDNGEMHEINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASSSQPQPRP EKPIYLSVKADKSMFLGNDPVTEANMINALDSLTAGKKDTTVFFRADKTVDYETMMKVMD TLHQAGYLKIGLVGEETVKAK >gi|289775900|gb|GG745510.1| GENE 489 515469 - 516185 1004 238 aa, chain - ## HITS:1 COG:STM3159 KEGG:ns NR:ns ## COG: STM3159 COG0811 # Protein_GI_number: 16766459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Salmonella typhimurium LT2 # 1 238 6 244 244 375 87.0 1e-104 MQADLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAEA RSLDQASDIASAFEAKSLTTQLINEAQNELELSAGAEDNEGIKERTGFRLERRVAAVGRH MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL FAAIPAVVIYNIFARMIGSYKASLGDVAAQVLLLQSRDLDLSASGVKPVRSAQKLRVG >gi|289775900|gb|GG745510.1| GENE 490 516451 - 517638 1469 395 aa, chain + ## HITS:1 COG:metC KEGG:ns NR:ns ## COG: metC COG0626 # Protein_GI_number: 16130906 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 395 1 395 395 735 87.0 0 MADKHLDTALVNAGRSKKYTQGSVNSVIQRASSLVFDTVEAKKHATRNRANGELFYGRRG TLTHFSLQEAMCELEGGAGCALFPCGAAAVANTILAFVEQGDHVLMTNTAYEPSQDFCTK ILAKLGVATSWFDPLIGADIAQLIRPETRVVFLESPGSITMEVHDVPAIVAAVRQVAPEA IIMIDNTWAAGILFKALDFGIDISIQAGTKYLIGHSDAMVGTAVANARCWPQLRENAYLM GQMLDADTAYMTSRGLRTLGVRLRQHHESSLRIAEWLAQHPQVARVNHPALPGSKGHEFW KRDFTGSSGLFSFVLNKRLNDAELAEYLDNFSLFSMAYSWGGFESLILANQPEQIAHIRP DAEVDFSGTLIRLHIGLENVDDLQADLAAGFARIV >gi|289775900|gb|GG745510.1| GENE 491 517770 - 518429 821 219 aa, chain + ## HITS:1 COG:ECs3893 KEGG:ns NR:ns ## COG: ECs3893 COG0586 # Protein_GI_number: 15833147 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 354 90.0 6e-98 MVVIQEIVAALWQHDFAALANPHVVGVVYLVMFATLFLENGLLPASFLPGDSLLLLAGAL IAKGVMDFVPTIAILTAAASLGCWLSYVQGRWLGNTQTVKGWLAHLPHKYHQRATCMFDR HGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSALLWVGVVTGLGYALSMIPF VKRHEDQVMTCLMILPIALLLAGLLGTLFVVIKKKYCSA >gi|289775900|gb|GG745510.1| GENE 492 518479 - 519378 930 299 aa, chain - ## HITS:1 COG:yqhC KEGG:ns NR:ns ## COG: yqhC COG2207 # Protein_GI_number: 16130908 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 298 77 374 375 521 84.0 1e-148 MQHAQICQILTEKINQLKDKHELLSSLLPDVRLLYGTQPGTRTPVMYQPGIVFLFSGHKI GYINERTFRYDTNEYLLLTVPLPFECETFATPEVPLAGMRLNVDILQLQELLMDIGEDPL FQPAVASSGINSAVLSEDILCAAERLLDVMDRPLDARILGKQIIREILYYVLTGPCGGAL LALVSRQTHFSLISRVLKHIESQYTENLSVDRLAAEANMSVSAFHHNFKSVTSTSPLQYL KTYRLHKARMLMIHDGMKASAAAMRVGYESPSQFSREFKRYFGMTPGEDAARIRTMQGM >gi|289775900|gb|GG745510.1| GENE 493 519575 - 520738 1657 387 aa, chain + ## HITS:1 COG:yqhD KEGG:ns NR:ns ## COG: yqhD COG1979 # Protein_GI_number: 16130909 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Escherichia coli K12 # 1 387 1 387 387 696 88.0 0 MNNFDLHTPTRILFGKGAIEKLREQIPAEARVLITYGGGSVKKTGVLDQVLTALNGLDVL EFGGIEPNPSYETLMNAVKLAREEKVTFLLAVGGGSVLDGTKFIAAAAHYDAAIDPWEIL ETYGSKIASAIPMGSVLTLPATGSESNKGAVISRKTTGDKRAFMSSHVQPQFAILDPVYT YTLPPRQVANGVVDAFVHTVEQYVTYPVDGKIQDRFAEGILLTLVEDGPKALQEPENYDV RANIMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTK RAKLLQYAERVWNITEGSEEQRIDAAIAATRSFFEQMGVPTRLSDYGLDGSSIPALLAKL EEHGMTKLGEHQDITLDVSRRIYEAAR >gi|289775900|gb|GG745510.1| GENE 494 520884 - 521711 1077 275 aa, chain + ## HITS:1 COG:STM3165 KEGG:ns NR:ns ## COG: STM3165 COG0656 # Protein_GI_number: 16766465 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 459 84.0 1e-129 MTHPTVIKLHDGNLMPQLGLGVWKAGNEEVVSAIHKALEVGYRSFDTAAAYQNEAGVGNA LHSAGVNRDELFITTKLWNDDQKRPHEALKESLSKLKLDYVDLYLIHWPVPAIGHYVEAW QALIELQQQGLAKSIGVCNFQVPHLQKLIDETGVAPVINQIELHPLLQQRQLHAWNATHK IQTESWSPLAQGGKGVFDQKVIHQLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAE NFNVWDFRLDKDELSEIAKLDQGKRLGPDPDQFGG >gi|289775900|gb|GG745510.1| GENE 495 521798 - 523981 2783 727 aa, chain - ## HITS:1 COG:STM3168 KEGG:ns NR:ns ## COG: STM3168 COG1032 # Protein_GI_number: 16766468 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Salmonella typhimurium LT2 # 1 727 1 723 723 1445 95.0 0 MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS FGMAICGRMLEAQGFRVGIISQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK LRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR RSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKV KGDKVLYAHASRILHHETNPGCARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRV PHPAYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR ARELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY PSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLHKALLRYHDPANWPLIRQALE AMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIVHQRSNGETTAKKPVK RGKVAGR >gi|289775900|gb|GG745510.1| GENE 496 524105 - 525517 1967 470 aa, chain - ## HITS:1 COG:ECs3901 KEGG:ns NR:ns ## COG: ECs3901 COG2132 # Protein_GI_number: 15833155 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 850 89.0 0 MSLSRRQFIKASGVALCAGAAPLKAHAAGQQLALPVPPLLESRRGQPLFLTLQRSHWSFT PGTRAPVWGINGRYMGPTIRVWSGDDVKLIYSNRLTENVAMTIRGLQVPGPLIGGAARMM SPNADWAPVLPIRQSAATLWYQANTPNRMAKQVYNGLAGMWLVEDEVSKNLPIPNHYGVD DFPVIIQDKRLDNFGTPEYSEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSR RYQLQMSDGRLLHVISGDQGFLPAPVSLKQLSLGPGERREILVDMTNGDEVSITCGEAAS IVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPVRLLPTELLSGTPIRSRDITLGD DPGINGQLWDPQRIDITAQQGTWERWTVRADRPQSFHIEGVMFQIRNVNGSSPFPEDRGW KDTVWVDGQVELLVYYAQPSWPHFPFQYLSQTLELADRGSIGQMLVNPAP >gi|289775900|gb|GG745510.1| GENE 497 525601 - 526311 824 236 aa, chain - ## HITS:1 COG:ECs3902 KEGG:ns NR:ns ## COG: ECs3902 COG0204 # Protein_GI_number: 15833156 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 2 235 11 244 245 437 87.0 1e-123 MVIYCIVVCILGCLYCLFSPRNPKHVATFGHLFGRLSPVFGLKVELRKPADAESYGNAIY IANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIA EVVNAFKKRKISFWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKIKLN RWNNGLVIVEMLPPVDTSQFGKDNVRALATHCRELMAAKIAELDNEVAAREAAKKS >gi|289775900|gb|GG745510.1| GENE 498 526530 - 528788 2949 752 aa, chain - ## HITS:1 COG:STM3174 KEGG:ns NR:ns ## COG: STM3174 COG0188 # Protein_GI_number: 16766474 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Salmonella typhimurium LT2 # 1 752 1 752 752 1394 94.0 0 MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKF KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY TESRLSKYAELLLSELGQGTVDWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDI PPHNLREVAKAAITLIEQPKTTLDELLDIVQGPDFPTEAEIITSRAEIRKIYQNGRGSVR MRAVWSKEDGAVVISALPHQVSGAKVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMEQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRR RLNHRLEKVLKRLHILEGLLVAFLNIDEVIEIIRTEDEPKPALMSRFGISETQAEAILEL KLRHLAKLEEMKIRGEQDELEKERDQLQAILASERKMNNLLKKELQADADAFGDERRSPL HEREEAKAMSEHDMQPSEPVTIVLSQMGWVRSAKGHDIDAQGLSYKAGDSWKASAKGKSN QPVVFIDTTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVEHMLMESDDRKLLMASDA GYGFVCTFNDLVARNRAGKALITLPDNAHVMPPLVIEDESDMLLAITAAGRMLMFPVSDL PQLSKGKGNKIISIPAAEAAAGQDGLAHLFILPPQSTLTIHVGKRKIKLRPEELQKVTGE RGRRGSLMRGLQKIDRVEIDSPRRAAAGDSEE >gi|289775900|gb|GG745510.1| GENE 499 528910 - 529779 563 289 aa, chain - ## HITS:1 COG:STM3175_2 KEGG:ns NR:ns ## COG: STM3175_2 COG3449 # Protein_GI_number: 16766475 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Salmonella typhimurium LT2 # 136 288 1 153 154 234 70.0 2e-61 MNDIKASPAYVGRFQRVCRYIARHLDEPLSLEALSAIAHSSPYHFHRQFSAYTGIPLYRY IQWLRLRRACWRLAFNPRDKVIDIALDAGFQNAESFSRAFRTAFDQSPTQFRQQPDWAEW HRRVPKHTLQEQTSMDVNIISFPTTRIAVLQHRGSPDLVNTTAARFIAWRKTSGLSPVAT SDTWGIAWDDPQTTPQEAFRFDICGTVAGPVGENAFGVINGEIPGGRCAVVRHHGSLDTL ANSVWFLYRDWLPASGETLRDFPVYFRYLNFVHEVAEHELQTDIYLPLA >gi|289775900|gb|GG745510.1| GENE 500 529857 - 530264 553 135 aa, chain - ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 135 1 130 130 192 77.0 1e-49 MKKIAAMTAIVALVSMPVLAAEQGGFTGPSSTTQVSSTAQAGGFTGPSGAVTTVANAKSL RDDTWVTLRGKITERISDDLYKFQDASGVINVDIDHKRWNGVTVGPQDTVEIQGEVDKDW NSVEIDVKQIRKIAP >gi|289775900|gb|GG745510.1| GENE 501 530414 - 531073 853 219 aa, chain + ## HITS:1 COG:STM3177 KEGG:ns NR:ns ## COG: STM3177 COG0745 # Protein_GI_number: 16766477 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 367 85.0 1e-102 MRILLVEDDKLIGDGIKAGLSKMGFSIDWFTAGLEGKNALYSAPYDAAILDLTLPGIDGL DILREWRDKGRHEPVLILTARDALSQRVEGLRLGADDYLCKPFALIEVAARLEALIRRAH GQSSSELRHGKVSLDPNRLTASLDGESLVLKPKEFALLELLLRNAGRVLPRKLIEEKLYT WDDEVSSNAVEVHVHHLRRKLGSGFIRTVHGIGYTLGDA >gi|289775900|gb|GG745510.1| GENE 502 531070 - 532419 1445 449 aa, chain + ## HITS:1 COG:ZygiY KEGG:ns NR:ns ## COG: ZygiY COG0642 # Protein_GI_number: 15803568 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 449 1 449 449 575 66.0 1e-164 MKRLARLSLRVRLTLLFAVLTAAACGVASVIAWQQTSKKLDKLFDTQQLLFARRLSAMHF DELRAPPASLSEKKKVRHGHIDDDALAFAIFTRDGTMVLNDGENGEDIQWSSQRDGFSDG YLRGDDDEWRFLWLTTADGRHRIVVGQEWDYRREMAMDIVTSQLTPWMIALPLMFVLLIV LLSRELAPLKKLARTLRLRAPDSAESLSVEKIPSEVRPLVEALNQLFQRTHDAMLRERRF TSDAAHELRSPLAALKVQTDVAQLSMDDAEGREKALAQLHQGIDRATRLVDQLLTLSRLD SLAQLDDVQPVAIDDLLQSAVMEMYHHAQQSAIELRLHLNASHIVHTGQPLLLSLLVRNL LDNAVRYSPRGSQVDITLNAREFRVRDNGPGISPQALARIGERFYRPPGQDAPGSGLGLS IVRRIASLHGMQVDFANARDGGFEARVYW >gi|289775900|gb|GG745510.1| GENE 503 532526 - 533107 806 193 aa, chain + ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 367 90.0 1e-102 MSNILIINGAKKFAHSNGQLNDTLTEVAESYLRDAGHDVKSVRAESEYDVKAEVQNFLWA DVVIWQMPGWWMGAPWTVKKYMDDVFTEGHGSLYASDGRTRSDASKKYGSGGLVQGKKYM LSLTWNAPMEAFTDEDQFFHGVGVDGVYLPFHKANQFLGMEALPTFIANDVIKMPDVPRY IAEYRKHLAEIFG >gi|289775900|gb|GG745510.1| GENE 504 533189 - 533503 441 104 aa, chain + ## HITS:1 COG:ECs3911 KEGG:ns NR:ns ## COG: ECs3911 COG1359 # Protein_GI_number: 15833165 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 179 88.0 1e-45 MLTVIAEIRTRPGQHHRQAVLDQFAKIIPTVLQEAGCHGYAPMVDHAAGVSFQTTAPDSI VMVEQWESVAHLEAHLQTPHMKAWSEAVKGDVLETTIRILQPGV >gi|289775900|gb|GG745510.1| GENE 505 533576 - 535471 2729 631 aa, chain - ## HITS:1 COG:STM3181 KEGG:ns NR:ns ## COG: STM3181 COG0187 # Protein_GI_number: 16766481 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Salmonella typhimurium LT2 # 1 631 1 630 630 1243 95.0 0 MTQSSYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVEVIL HADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVV NALSKRVEVTVRRDGQVYSIAFENGEKVEDLHVTGTCGKRNTGTSVHFWPDESFFDSPRF SVSRLTHLLKAKAVLCPGVEIVFRDQVNDSEQRWCYADGLNDYLCEAVNGLPLLPEKPFV GTFSGETEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRN ILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFSLWLN QNVQAAELLAEMAISSAQRRLRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEG DSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQ LRYGKICILADADSDGLHIATLLCALFVRHFRTLVKEGHVYVALPPLYRIDLGKEVYYAL TEEEKTGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLVISDEDEQQT TAMMDMLLAKKRSEDRRNWLQEKGDMADLEV >gi|289775900|gb|GG745510.1| GENE 506 535502 - 536077 622 191 aa, chain - ## HITS:1 COG:ECs3919 KEGG:ns NR:ns ## COG: ECs3919 COG3150 # Protein_GI_number: 15833173 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 190 1 190 193 334 82.0 6e-92 MATLLYLHGFNSSPRSAKAMALKTWLSQQHPDITMVVPELPPYPAETAELLESIVLEHGG EPLGVVGSSLGGYYATWLSQCFMVPAVVVNPAVRPFELLNNFLGHNENPYTGQQYVLESR HIYDLKVMQIDPLEAPDLLWLLQQTGDEVLDYRQAVHYYASCRQTVEEGGNHAFVGFDDH FTQIIEFLGLC >gi|289775900|gb|GG745510.1| GENE 507 536077 - 536904 596 275 aa, chain - ## HITS:1 COG:STM3183 KEGG:ns NR:ns ## COG: STM3183 COG1409 # Protein_GI_number: 16766483 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 444 82.0 1e-124 MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWESYQAVLSAIHASQRPCDLIV ATGDLAQDHSSAAYQHFAEGIASFAAPCVWLPGNHDFQPAMYSTLQASGISPAKRVFLGD HWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTLLLLHHHPLPAGCSWLDQHSL RNAGALDRALSAWPRVRHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS PGWRWLELHPDGTLTTEVCRLEGAEFHPDIASEGY >gi|289775900|gb|GG745510.1| GENE 508 536929 - 537351 203 140 aa, chain - ## HITS:1 COG:STM3184 KEGG:ns NR:ns ## COG: STM3184 COG3151 # Protein_GI_number: 16766484 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 139 1 139 140 260 91.0 6e-70 MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVA IEQTLPAVSYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ FLADWLRYCLAHGAMAIPVC >gi|289775900|gb|GG745510.1| GENE 509 537348 - 537980 687 210 aa, chain - ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 208 1 208 209 350 86.0 8e-97 MSKPIQQGITFFKNDVEIIARETLYRGFFSLDLYRFRHRLFNGGMSGEVTREIFERGHAA VLLPFDPVRDEVVLVEQIRIAAYDTSESPWLLEMVAGMIEAGETVEDVARREALEEAGLE VGRTKPILSYLASPGGTSERLSILVGEVDASTAKGIHGLAEENEDIRVHVVSREQAYQWV EEGKIDNAASVIALQWLQLHYHNLRNEWTK >gi|289775900|gb|GG745510.1| GENE 510 538177 - 539649 1870 490 aa, chain + ## HITS:1 COG:STM3186 KEGG:ns NR:ns ## COG: STM3186 COG1538 # Protein_GI_number: 16766486 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 490 3 491 491 697 85.0 0 MKKLLPILIGLSLTGFSAMSQAENLLQVYQQARISNPDLRKSAADRDAAFEKINEARSPL LPQLGLGADYTYNNGYRDSNGINSNVTSGSLQLTQVLFDMSKWRALTLQEKTAGIQDVTY QTDQQTLILNTATAYFKVLAAIDTLSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR SQYDAVLANEVTARNDLDNAVEELRQVTGNYYPELASLNVNGFKTNKPQAVNALLKEAEN RNLSLLQARLNQDLAREQIRQAQDGHLPTLSLSASSGVSNTSYSGSKTHNNPQQYQDNDA GQNQIGLNFSLPLYQGGAVTSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNVNASIS SINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSNARYNYLINELN IKSALGTLNEQDLVALNNTLGKPIPTSADSVAPENPQQDATADGYGNTTAAVKPASARTT QSSGSNPFRQ >gi|289775900|gb|GG745510.1| GENE 511 539817 - 540488 663 223 aa, chain + ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 223 12 234 234 313 89.0 2e-85 MKRTKKINHSSFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGK AAECTTAYTNAVKEAERTAPKYATREDCVAEFGEGQCQQTPAQAGVAPENQAQAQSSGSF WMPLMAGYMMGRLMGGGMAQQQPLFSSKNPASPAYGQYTDASGKSYGAAQPGRTMNVPKT AMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGSTSSSRSMGG >gi|289775900|gb|GG745510.1| GENE 512 540494 - 541654 1718 386 aa, chain + ## HITS:1 COG:STM3188 KEGG:ns NR:ns ## COG: STM3188 COG0754 # Protein_GI_number: 16766488 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Salmonella typhimurium LT2 # 1 386 1 386 387 733 90.0 0 MERVSITERPDWREKATEYGFNFHTMYGEPYWSEEAYYKLTLAQVEKLEEVTAELHQMCL QVVEKVIASDELMTKFRIPKHTWGFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADT PTSLYEAAFFQWIWLEDQLNAGKLPAGSDQFNSLQEKLIDRFGELREQFGFQLLHMACCR DTVEDRGTVQYLQDCAAEAGLATEFLYIEDIGLGEKGQFTDLQDQVIGNLFKLYPWEFML REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLAAYFSEDAHPEMEKYV IKPIFSREGANVSIVEQGKVVESVEGPYGEEGTIVQEFYPLPKFGDSYTLIGSWLINDQP AGIGIREDRALITQDLSRFYPHIFVE >gi|289775900|gb|GG745510.1| GENE 513 541695 - 542486 1027 263 aa, chain - ## HITS:1 COG:STM3189 KEGG:ns NR:ns ## COG: STM3189 COG3384 # Protein_GI_number: 16766489 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 262 15 276 276 457 85.0 1e-129 MSPTRMPALFLGHGSPMNVLEDNIYTRAWAHLGETLPRPKAIVVVSAHWFTRGTGVTAME APKTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLSPVPVTLDKEAWGFDHGSWGVLIK MYPQADIPMVQLSIDSTKPPAWHLEMGRKLASLRDEGIMLVASGNVVHNLRTARWHGENT PYPWAESFNNYVKANLQWQGPDEQHPLVNYLAHEGGSLSNPTAEHFLPLLYILGAWDGVE AITIPVDGIEMGSLSMLSVVVGA >gi|289775900|gb|GG745510.1| GENE 514 542673 - 543443 1127 256 aa, chain + ## HITS:1 COG:STM3190 KEGG:ns NR:ns ## COG: STM3190 COG0428 # Protein_GI_number: 16766490 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Salmonella typhimurium LT2 # 1 256 1 257 257 341 84.0 9e-94 MSSPLILTLLAGSATFIGAIFGVIGQKPSNRLLGFSLGFAAGIMLLISLMEMLPAALTAE GMSPLLGYGMFVIGLLGYFGLDRLLPHAHPQDLMTPATPRPRNLRRTAILLTLGISLHNF PEGIATYVTASNNLELGMGVALAVALHNIPEGLAVAGPVYAATGSRSKAVLWAGLSGMAE ILGGVLAWLILGSLVSPLVMGAIMAAVAGIMVALSVDELMPLAKEIDPQSNPSYGVLCGM SVMGLSLVVLQTMGIG >gi|289775900|gb|GG745510.1| GENE 515 543505 - 544158 917 217 aa, chain - ## HITS:1 COG:STM3195 KEGG:ns NR:ns ## COG: STM3195 COG0108 # Protein_GI_number: 16766495 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 217 1 217 217 387 94.0 1e-108 MNQTLLSSFGTAFERVEHALDALREGRGVMVLDDEDRENEGDMIFAAETMTVEQMALTIR HGSGIVCLCLTEERRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRA AIADGAKPSDLNRPGHVFPLRAQPGGVLTRGGHTEATIDLVTLAGFKPAGVLCELTNDDG TMARAPECIKFAQQHNMAVVTIEDLVAYRREHERKAS >gi|289775900|gb|GG745510.1| GENE 516 544536 - 544808 435 90 aa, chain + ## HITS:1 COG:ECs3930 KEGG:ns NR:ns ## COG: ECs3930 COG2960 # Protein_GI_number: 15833184 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 21 110 119 108 78.0 3e-24 MIDPKKIEQIARQVHESMPKGLRDLGEDVEKKIRQALQSQLTRLDLVSREEFDVQTQVLL RTREKLALLEQRLNDLENRQAATPGSEEQP >gi|289775900|gb|GG745510.1| GENE 517 544844 - 545041 121 65 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0640 NR:ns ## KEGG: Kvar_0640 # Name: not_defined # Def: glycogen synthesis protein # Organism: K.variicola # Pathway: not_defined # 1 65 1 65 65 122 100.0 5e-27 MNHNDMYSMKNFDFLARSFARMHAQGQPVDLQAIVGNMDEEHREWFCQRYELYCRQVNSP AEAAH >gi|289775900|gb|GG745510.1| GENE 518 545260 - 546693 2111 477 aa, chain - ## HITS:1 COG:STM3200 KEGG:ns NR:ns ## COG: STM3200 COG2870 # Protein_GI_number: 16766500 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Salmonella typhimurium LT2 # 1 477 1 477 477 852 91.0 0 MKVTLPEFERAGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVENIEERPGGAANVAMNI ASLGATSRLVGLTGIDDAARALSQALANVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFSGVDPQPMHERIQQALGSIGALVLSDYAKGALTSVQTMIALAREAGVPVLIDPKG TDFERYRGATLLTPNLSEFEAVVGKCQDEAEIVERGMKLIAEFELSALLVTRSEQGMTLL QPGRPPLHMPTQAQEVYDVTGAGDTVIGVLAATLASGNTLEEACYFANAAAGVVVGKLGT STVSPVELENAVRGRAETGFGVMSEEELKQAVAAARKRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGETRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRL IAGILPDLLVKGGDYKPEQIAGSEEVWANGGEVLVLNFEDGCSTTNIIKKIQKDSDK >gi|289775900|gb|GG745510.1| GENE 519 546752 - 549586 3776 944 aa, chain - ## HITS:1 COG:STM3201 KEGG:ns NR:ns ## COG: STM3201 COG1391 # Protein_GI_number: 16766501 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Salmonella typhimurium LT2 # 2 944 3 946 947 1514 83.0 0 MPLSPQLQQHWQTVADRLPADFPIAELSPQARSVMAFSDFVEQSVIAQPGWLNELADSSP EAEEWRHYEAWLQDRLQAVTDEAGLMRELRLFRRQMMVRIAWAQALSLVSEEETLQQLSA LAETLIVAARDWLYAACCKEWGTPCNAEGQPQPLLILGMGKLGGGELNFSSDIDLIFAWP EHGATRGGRRELDNAQFFTRLGQRLIKALDQPTQDGFVYRVDMRLRPFGDSGPLVLSFAA LEDYYQEQGRDWERYAMVKARIMGDNDDVYASELRAMLRPFVFRRYIDFSVIQSLRNMKG MIAREVRRRGLKDNIKLGAGGIREIEFIVQVFQLIRGGREPALQQRALLPTLAAIDELHL LPAGDAALLREAYLFLRRLENLLQSINDEQTQTLPQDELNRARLAWGMHTEDWETLSAQL ASQMANVRRVFNELIGDDEDQSPDEQLAEYWRELWQDALEEDDASPALAHLNDTDRRSVL ALIADFRKELDRRTIGPRGRQVLDQLMPHLLSEICSRADAPLPLARITPLLTGIVTRTTY LELLSEFPGALKHLITLCAASPMVASQLARHPLLLDELLDPSTLYQPTATDAYRDELRQY LLRVPEEDEEQQLEALRQFKQAQQLHIAAADIAGTLPVMKVSDHLTWLAEAILDAVVQQA WGQMVARYGQPTHLHDRQGRGFAVVGYGKLGGWELGYSSDLDLVFLHDCPAEVMTDGERE IDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTTADAFADYQQNEAWT WEHQALVRARVVYGDPALQARFDAIRRDILTTPREGTTLQTEVREMREKMRAHLGNKHPD RFDIKADAGGITDIEFITQYLVLRYASDKPKLTRWSDNVRILELLAQNDIMDEEEARALT HAYTTLRDALHHLALQEQPGHVAPEAFSQEREQVSASWQKWLMA >gi|289775900|gb|GG745510.1| GENE 520 549610 - 550908 1533 432 aa, chain - ## HITS:1 COG:ygiF KEGG:ns NR:ns ## COG: ygiF COG3025 # Protein_GI_number: 16130950 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 432 1 433 433 506 63.0 1e-143 MAQEIELKFIVAQNGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGD QGRYEMTLKIAGRVVGGLHQRPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLF STDFARERWVIQEGNSEIEIALDRGEVKAGEHQEPICELELELLAGETADLLRLAHRLLE SGVLRQGSLSKAARGYHLAQGNGERPVTSLTVLTVAAKASVEQGLEAALESALAHWLYHD EVWLRGNAKAKAEILLALARVRHTLVLFGGIVPRKATTQLRALLNDAEAVLLAADTADEA LFRTEVVGAKLALTEWLVQRGWRPFLNEAGEKKIAGSFKRFADINLSRVAAELRGAVQHL AVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQELHRAIAHDDRSVFEYFRRQAL AAEPFWLHSGKR >gi|289775900|gb|GG745510.1| GENE 521 551123 - 551743 761 206 aa, chain + ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 298 83.0 3e-81 MPKLRLITFTLLALSAATAVHAEEKRYVSDELNTWVRSGPGDNYRLVGTINAGEEVSVLQ TNDSTSYAQVRDSNGRTAWIPLKELSNEPSLRTRVPDLENQVKTLTDKLNNIDATWNQRT ADMQKKVAGSDSAINALKDENQKLKNELVVAQKKVNAANLQLDDKQRTIIMQWFMYGGGV LGVGLLLGLVLPHLVPSRKRKDRWMN >gi|289775900|gb|GG745510.1| GENE 522 551805 - 553046 1603 413 aa, chain + ## HITS:1 COG:cca KEGG:ns NR:ns ## COG: cca COG0617 # Protein_GI_number: 16130952 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli K12 # 1 412 1 412 412 728 86.0 0 MKSYLVGGAVRDALLGLPVKDRDWVVVGATPQQMLDAGYQQVGRDFPVFLHPQSREEYAL ARTERKSGAGYTGFTCYAAPDVTLEADLLRRDLTVNALAQDADGTIIDPYGGQNDLRLRL LRHVSPAFSEDPLRVLRVARFAARYAHLGFRIAEETQALMHAMVEAGELAHLTPERVWKE TESALTTRNPQVFFQTLRDCQALKVLFPEIDALYGVPAPAKWHPEIDTGLHTLMTVTMAA MLSPDVDVRFATLCHDLGKGLTPKALWPRHHGHGPAGVKLVEQICARLRVPNDIRDLAKL VAEYHDLIHTLPILQPKTLVKLFDSIDAWRKPQRVQQIALTSEADVRGRTGFEASDYPQG RLLLEAWEVAQSVSTKEVVAAGFKGAEIREELTRRRIAAVAQWKEQRCPQPQG >gi|289775900|gb|GG745510.1| GENE 523 553058 - 553879 1226 273 aa, chain - ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 439 90.0 1e-123 MSDIHSLLVAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTANTFEVVIQLGSILAV VVMFWRRLFGLIGIHFGRPPEHEGKGSGRLSLIHILLGMIPAVVLGLIFHDTIKSLFNPV NVMYALIVGGVLLIAAEVLKPKQPRAVGIDDMTYRQAFVIGCFQCLALWPGFSRSGATIS GGMLMGVSRYAASEFSFLLAVPMMMGATVLDVYKSIGFLNMGDVPMFAVGFVMAFIVALI AIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF >gi|289775900|gb|GG745510.1| GENE 524 554077 - 554460 416 127 aa, chain - ## HITS:1 COG:STM3206 KEGG:ns NR:ns ## COG: STM3206 COG1539 # Protein_GI_number: 16766506 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Salmonella typhimurium LT2 # 1 119 2 120 120 202 88.0 1e-52 MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEIAWDNRKAAASDDVSDCLSYADISERV IAHVEGGKFALVERVAEEVADLLLETFQSPWVRIKVSKPGAVARAANVGVIIERGLNLKQ NFSGHTC >gi|289775900|gb|GG745510.1| GENE 525 554568 - 555185 733 205 aa, chain + ## HITS:1 COG:STM3207 KEGG:ns NR:ns ## COG: STM3207 COG0344 # Protein_GI_number: 16766507 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 200 1 200 203 348 90.0 5e-96 MSAIAPGLVLLAYLCGSISSAILVCRLAGLPDPRDSGSGNPGATNVLRIGGKGAAVAVLI FDVLKGMLPVWGAWALGLTPFWLGLVAIAACVGHIWPVFFHFRGGKGVATAFGAIAPIGL DLTGVMAGTWLLTILLSGYSSLGAIVSALIAPFYVWWFKPQYTFPVSMLSCLILLRHHDN IQRLWRRQESKIWTRMKKKKAPEQK >gi|289775900|gb|GG745510.1| GENE 526 555583 - 556407 739 274 aa, chain + ## HITS:1 COG:ECs1321 KEGG:ns NR:ns ## COG: ECs1321 COG0829 # Protein_GI_number: 15830575 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 358 73.0 6e-99 MHGTVLPPLKKGWQATLDLRFQQAGGKTVLASAQHVGPLTVQRPFYPEEETCHLYLLHPP GGIVGGDELTIIAHLDPGCHTLITMPGASKFYRSSGAQALLRQQLTLAPQATLEWLPQDA IFFPGANARLSTTFHLCASSTLLAWDLLCLGRPVIGETFSHGTLSNRLEVWVDEIPLLVE RLHLQEGELSSVAECPWVGTLLCYPATDALLDGVRDALAPLGLYAGASLTDRLLTVRFLS DDNLICQQVMRDVWQFLRPHLTGKSPVLPRIWLT >gi|289775900|gb|GG745510.1| GENE 527 556417 - 556719 518 100 aa, chain + ## HITS:1 COG:ECs1322 KEGG:ns NR:ns ## COG: ECs1322 COG0831 # Protein_GI_number: 15830576 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 159 96.0 1e-39 MELTPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARDGKSVASLMEEG RHVLTREQVMEGVPEMIPDIQVEATFPDGSKLVTVHNPII >gi|289775900|gb|GG745510.1| GENE 528 556729 - 557049 324 106 aa, chain + ## HITS:1 COG:ECs1323 KEGG:ns NR:ns ## COG: ECs1323 COG0832 # Protein_GI_number: 15830577 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 176 82.0 1e-44 MIPGEYHVKPGQIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQVTGYR LNIPAGTAVRFEPGQKREVELVAFAGHRAVFGFRGEVMGPLEANDE >gi|289775900|gb|GG745510.1| GENE 529 557042 - 558745 2328 567 aa, chain + ## HITS:1 COG:ECs1324 KEGG:ns NR:ns ## COG: ECs1324 COG0804 # Protein_GI_number: 15830578 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Escherichia coli O157:H7 # 1 567 2 568 568 1053 90.0 0 MSNISRQAYADMFGPTVGDKVRLADTELWIEVEDDLTTYGEEVKFGGGKVIRDGMGQGQM LAADCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIA AEGKIVTAGGIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRM LQAADSLPVNIGLLGKGNVSQPDALREQVAAGVIGLKIHEDWGATPAAIDCALTVADEMD IQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNP TLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSD SQAMGRVGEVVLRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHE VGSIEVGKLADLVVWSPAFFGVKPATVIKGGMIAIAPMGDINASIPTPQPVHYRPMFGAL GSARHHCRLTFLSQAAADNGVAERLNLRSAIAVVKGCRTVQKADMVHNSLQPNITVDAQT YEVRVDGELITSEPADVLPMAQRYFLF >gi|289775900|gb|GG745510.1| GENE 530 558755 - 559231 601 158 aa, chain + ## HITS:1 COG:ECs1325 KEGG:ns NR:ns ## COG: ECs1325 COG2371 # Protein_GI_number: 15830579 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 224 81.0 6e-59 MLYLTQRLETPAAATASVTLPIDVRVKSRVKVTLNDGREAGLLLPRGLLLRGGDVLSNEE GTEFVQVIAADEGVSVVRCDDPFMLAKACYHLGNRHVPLQIMPGELRYHHDHVLDDMLRQ FGLTVTFGQLPFEPEAGAYASESHGHHHAHHAHHAHSH >gi|289775900|gb|GG745510.1| GENE 531 559233 - 559907 709 224 aa, chain + ## HITS:1 COG:ECs1326 KEGG:ns NR:ns ## COG: ECs1326 COG0830 # Protein_GI_number: 15830580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 326 79.0 2e-89 MSTAEQRLRLMQLASSNLPIGGYSWSQGLEWAVEAGWVPDVAAFERWQRRQMTEGFFTVD LPLFARLYRACEQGDIAAAQRWTAYLLACRETRELREEERNRGAAFARLLSDWQPDCPPA WRTLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAVMAGVKLVPFGQQAAQQLILR LCDHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS >gi|289775900|gb|GG745510.1| GENE 532 559916 - 560533 1110 205 aa, chain + ## HITS:1 COG:ECs1327 KEGG:ns NR:ns ## COG: ECs1327 COG0378 # Protein_GI_number: 15830581 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 345 90.0 4e-95 MNSYKHPLRVGVGGPVGSGKTALLEALCKAMRDTWQLAVVTNDIYTKEDQRILTEAGALA PERIVGVETGGCPHTAIREDASMNLAAVEALSEKFGNLDLIFVESGGDNLSATFSPELAD LTIYVIDVAEGEKIPRKGGPGITKSDFLVINKTDLAPYVGASLEVMASDTQRMRGDRPWT FTNLKQGDGLSTIIAFLEDKGMLGK >gi|289775900|gb|GG745510.1| GENE 533 560686 - 562293 2373 535 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0624 NR:ns ## KEGG: Kvar_0624 # Name: not_defined # Def: permease for cytosine/purines uracil thiamine allantoin # Organism: K.variicola # Pathway: not_defined # 1 535 1 535 535 1000 99.0 0 MSSLDLNPELPATTRTSGSRETLEDYTLRYAPLSFRRWGPGVVAVTALGGIAYLADFSIG ASIGMAWGTSNAIYSILVAALVIFLTGIPLAITAARYNIDLDLITRSAGFGYFGSVITSI IFAGFTFIFFALEGSIMAQGLLVGLGIPLWVGYLIATLMVLPLVVYGMKALTRLQVWTTP LWLVLMVVPVVWLIVKDPQLVDGFLHFAGKNSASTVDITAIMLGAGVCLSLIMQIGEQID YLRFMPPKTAENRKSWWLAVFSAGPGWVVLGAIKQIIGAFLGFYLLTRFPAVHNTEPVQQ FVSVFDNLVPGWLALTLAVVLVVISQIKINVTNAYSGSLAWTSAWTRTTKRYPGRIIFVV VNLAIALALMEGDMFSALSWILGFYSNFAIAWVVVVATDITFNKGLLKLAPAQPEYRRGM IYNVNPVGVVSFGLAAGLSICAFFGLLGATLAPFSPLIALVVAFVMTPLMGLLTRGRYYI KQVDDGIAEPRYDAAGNASTTVYQCVSCEEEYERPDVMLSHKHQGAICSLCKSME >gi|289775900|gb|GG745510.1| GENE 534 562338 - 563351 663 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 3 327 480 813 832 259 44 1e-67 MRVLGIETSCDETGIAIYDDQQGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ AALKEAGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPM LEDNPPAFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGG PMLSKMAAQGTEGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRNNGDDEQTRADIARAFE DAVVDTLMIKCRRALEQTGFKRLVMAGGVSANRTLRAKLAEMMQKRGGEVFYARPEFCTD NGAMIAYAGMVRLQTGAKAELGVTVRPRWPLAELPAA >gi|289775900|gb|GG745510.1| GENE 535 563589 - 563804 357 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 4e-32 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|289775900|gb|GG745510.1| GENE 536 563916 - 565661 1677 581 aa, chain + ## HITS:1 COG:ECs3949 KEGG:ns NR:ns ## COG: ECs3949 COG0358 # Protein_GI_number: 15833203 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Escherichia coli O157:H7 # 1 581 1 581 581 1082 90.0 0 MAGRIPRVFISDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPYEAGNGPSQIERHQRQNLYQLL DGLNAFYQQSLMQPAADPARQYLAKRGLSSEVITRFAIGYAPPGWDNVLKRFGGNQENRQ SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGDALPKYLNSPETDIFH KGRQLYGLYEAQQDNPEPPRLLVVEGYMDVVALAQYDINYAVASLGTSTTADHIQLLFRV TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKAAFEA RMEQAQPLSTFLFNSLLPQVDLSTPDGRAQLSTLALPLITQVPGETLRIYLRQELGNKLG ILDDAQLERLMPKQSENGAPRPAPQLKRTTMRILIGLLVQNPDLAPLVPPLEGLDSRKMP GLSLFSELVKSCLAQPGLTTGQLLEQYRGTKEAATLEKLSMWDDIADKDIAEKTFTDSLN HMFDSLLELRQEELIARDRTHGLSSEERRELWTISQELAKK >gi|289775900|gb|GG745510.1| GENE 537 565880 - 567721 2699 613 aa, chain + ## HITS:1 COG:STM3211 KEGG:ns NR:ns ## COG: STM3211 COG0568 # Protein_GI_number: 16766511 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Salmonella typhimurium LT2 # 1 613 46 660 660 1011 95.0 0 MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATH VGSELSQEEMDDDEDEDEDDDADDNSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRSMMDRVRTQERIIMKLCVEQCKMPKK NFITLFTGNETSETWFNAAVAMNKPWSEKLLEVKEDVQRGLQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD >gi|289775900|gb|GG745510.1| GENE 538 567821 - 568327 509 168 aa, chain - ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 168 1 168 168 263 73.0 8e-71 MISDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIHQAGFTDRQLRPEEELQLL DTRCGITMLVERPTVQASEVALQELRSGGRELVRKIEEYQPQALAVLGKQAFELAFNQRG AKWGKQPMTIGTTQVWVLPNPSGLNRATLDKLVAAYRELDDALATRGQ >gi|289775900|gb|GG745510.1| GENE 539 568687 - 569259 585 190 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0618 NR:ns ## KEGG: Kvar_0618 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 190 1 190 190 387 98.0 1e-107 MAMVNENIVIRLAQDVDIPEVKQLLERYHAKNLAGEQRANGFVTTDMTQQQLSELSSAES GVVIAVDRSCNKVIGLLLGGSWEFLSPWPMFKYMASILNEYRYQGKKLDAASSYQYGPIC VAEEYRGQGVGELLLEYQRKVFAPRYPVIVTFVNVLNPRSYAFHTRNQFEDVGFFNFNGN KYHMMALPTS >gi|289775900|gb|GG745510.1| GENE 540 570791 - 571180 174 129 aa, chain + ## HITS:1 COG:MA3419 KEGG:ns NR:ns ## COG: MA3419 COG1237 # Protein_GI_number: 20092231 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily II # Organism: Methanosarcina acetivorans str.C2A # 5 124 160 279 280 130 48.0 6e-31 MLTPVGQTVDDNGEITDDYVMDDSALAIKTEEGLVVVTGCSHAGIANIIEYAKQVTGENH IVSVIGGFHLQNADEDRLTQTGDYLKALSPDSLYPCHCTDLAAKISLARFIKINEVGVGL KLDFSAAGK >gi|289775900|gb|GG745510.1| GENE 541 571361 - 571723 404 120 aa, chain + ## HITS:1 COG:no KEGG:KPK_0637 NR:ns ## KEGG: KPK_0637 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 120 1 120 120 208 100.0 5e-53 MKIRDISISTCLALLLMGCVAKPPMATESEMKEAAAFAFNVDASQVTISDAKQQDVKTNF VATIGKTSHRCYVTKAAEPKLYGLIPLGGGSTVSDAICAGSNPTPASKTCDALSKKAGRC >gi|289775900|gb|GG745510.1| GENE 542 571792 - 572157 338 121 aa, chain - ## HITS:1 COG:no KEGG:KPK_0636 NR:ns ## KEGG: KPK_0636 # Name: not_defined # Def: HdeB family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 121 1 121 121 222 99.0 3e-57 MAKEKRALWRKWGWKRLMAGIIVLAISSAAAGKNIAPDEVRTRDMMRCQDYLQLDPRTWT PMVIWLMNDPFSLQPPEWTDFHEAELVLTPILTEICRQEPDAWLTSLRERLNSYQQVRSL N >gi|289775900|gb|GG745510.1| GENE 543 572458 - 573072 784 204 aa, chain + ## HITS:1 COG:ECs3248 KEGG:ns NR:ns ## COG: ECs3248 COG2197 # Protein_GI_number: 15832502 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 264 66.0 8e-71 MNAIIIDDHPLARIAIRNLLDTNGITVAAELDSGAHAVQTAESMQPDLLIVDVDIPELSG IDVLEQLRKRRYRGKIIVISAKNELFYGKRSADCGANGFVSKKEGMNNILAAIDAANNGY SYFPFSLERFCTHGITDQDRLDTLSTQEMKVFRYILSGVDYTTIGSKMNISNKTVSTYKV RLMDKLGCSTLLELYDFAQRNKIG >gi|289775900|gb|GG745510.1| GENE 544 573077 - 576319 3308 1080 aa, chain + ## HITS:1 COG:evgS_1 KEGG:ns NR:ns ## COG: evgS_1 COG0834 # Protein_GI_number: 16130302 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 29 527 31 529 530 384 36.0 1e-106 MAVRLILSVVVGLALSLSPATYAMKQLELKSHSHIAAIDIPLSGKEKAWLAAQPTLTVGT WLPERTPIVYDGDEKSYQGINADYLALMAHSLGLKVIIRQYDTEQQALTALADRQVDTLL TQVAHRDALAPGLDQSAPLLKTWPALVTSLKSPLPPLTTDRRVTLACTRECAFFDIIQQA FPNAKITLYDSDYQALASVVSGENQYFIGNNITTGHCISKYFSQSLVIAHYFRQQEQHNR FVTRDDRPELHQILDRFIHAIDSDTAMRIMQNWLNRGDLSFLNTPLPFSAEEQRWLQKHR RVRLLVNPYFPPFTLVDDEDELRGIMADMLNIFSLQTGLQFEPILVRNRHDLAKRMEKED WAIMPAATLNSQPQAYVTLSDPLINVAFVLVARGSAPDPHLLTRSARIALPVGPIAAHDL KTRFPQVNWVETDNVGIAMKMVEEGEVDAAVASELSVRYMIDHYYPQGLHYTRIDGLPVA AIRLAIPRDEPVLAAILGKALQAIPPRDILQMTEKWSKISSQQIENWSQYSRQFYQLIAF ALVLIAISLGWGLSLCREVRKRKDSQQRLEDELAQKEALSCALEREKDKAIQATKAKSRF LASMSHELRTPVSAIVGFLELLAKPELNVGQRKEAIELAGSTAQTLLGLIGNILDIDKIE SGKYQITPQWSDVAQLVSQQCHTFDALAQQKGIVLHHHNALQEGIMLWLDPQALRQILNN LIGNALKFTAEGAIQVSCRLVQADETQGELTLIVSDSGCGISEAEQATLFHRYAQARQGR QQTGSGLGLVICKELVALMQGRLEMVSHPGVGTTFTITLPVKASHCALHAPQALPTRPQA LPGLAILIADDHPTNRLLLKRQLSTIGYSVDEACDGEEAENKLASKHYDLLITDLNMPRK DGLALAASLRRRYPGLVIWGVTASALPQSREACLASGMNMCLFKPVSVQTLSHELSRLAE GRASPNVTRHLKLNVLTENTGGDQALMTEILETFRDASATDLQAAGQAIVRHEPQTFLRA LHRLHGSAQILGITALQQLCAPFEAKRPDSLTPASCLEVVQHITGVMREIDGEINALIGR >gi|289775900|gb|GG745510.1| GENE 545 576410 - 577042 957 210 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0610 NR:ns ## KEGG: Kvar_0610 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 210 1 210 210 292 100.0 7e-78 MKKVILASLLATMMGTSPVWAADSATAAPTAAATAQVQKEAADVLQVAVQGANAMRDVQF ARLALFHGQPESAKKLTDDAAALLAADDASWAKFVKTDATAKMIADRYVVINATVALSED YVATPEKESAIKSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQAQKLL KAGKYYEANLVLKGAEEGIVVDSEMLVAGN >gi|289775900|gb|GG745510.1| GENE 546 577310 - 577885 422 191 aa, chain + ## HITS:1 COG:YPO0590 KEGG:ns NR:ns ## COG: YPO0590 COG3247 # Protein_GI_number: 16120919 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 15 189 21 189 189 92 33.0 6e-19 MFMFSHYTLNAFSPRIFLRYKRHAGMMAALLFICGACCLAWPLVAGWYLAVVTGMLLMIC GFYSLYSLIVFRQQHWKSRLVALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGI SRIVSGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQSWLFITAFIGVEMIFSAIGFL VLRNKMKHAQA >gi|289775900|gb|GG745510.1| GENE 547 577912 - 578217 460 101 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0608 NR:ns ## KEGG: Kvar_0608 # Name: not_defined # Def: acid-resistance protein # Organism: K.variicola # Pathway: not_defined # 1 101 1 101 101 192 98.0 5e-48 MNLPKALVLTAAATTFCLMTSPAFAIQETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTD FSGGDYVDWHEVETVSVPKMLQECHKNPAAKLGDLSAVIKK >gi|289775900|gb|GG745510.1| GENE 548 578273 - 579076 1023 267 aa, chain - ## HITS:1 COG:ECs4852 KEGG:ns NR:ns ## COG: ECs4852 COG0580 # Protein_GI_number: 15834106 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli O157:H7 # 1 267 1 268 281 421 81.0 1e-118 MNQTSTLTGQCVAEFLGTGLLIFFGAGCVAALRVAGASFGQWEISIIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFERRKVLPFIVAQTAGAFCAAALVYGLYRQLFLDLEQSQH IVRGTAASLNLAGVFSTYPHPHITFIQAFAVETTITAILMAMIMALTDDGNGIPRGPLAP LLIGLLIAVIGASMGPLTGFALNPARDFGPKLFTSLAGWGSIAFTGGLAIPYFLVPLLAP VVGAIIGAFFYRKLIGRHLPCECGIDE >gi|289775900|gb|GG745510.1| GENE 549 579130 - 580953 2339 607 aa, chain - ## HITS:1 COG:no KEGG:KPN_03486 NR:ns ## KEGG: KPN_03486 # Name: orfZ # Def: glycerol dehyrdratase activator # Organism: K.pneumoniae # Pathway: not_defined # 1 607 1 607 607 1053 99.0 0 MPLIAGIDIGNATTEVALASDDPQARAFVASGIVATTGMKGTRDNIAGTLAALEQALAKT PWSMSDVSRIYLNEAAPVIGDVAMETITETIITESTMIGHNPQTPGGVGVGVGTTIALGR LATLPAAQYAEGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNNRLRKT LPVVDEVTLLEQVPEGVMAAVEVAAPGQVVRILSNPYGIATFFGLSPEETQAIVPIARAL IGNRSAVVLKTPQGDVQSRVIPAGNLYISGEKRRGEADVAEGAEAIMQAMSACAPVRDIR GEPGTHAGGMLERVRKVMASLTGHEMSAIYIQDLLAVDTFIPRKVQGGMAGECAMENAVG MAAMVKADRLQMQVIARELSARLQTEVVVGGVEANMAIAGALTTPGCAAPLAILDLGAGS TDAAIVNAEGQITAVHLAGAGNMVSLLIKTELGLEDLSLAEAIKKYPLAKVESLFSIRHE NGAVEFFREALSPAVFAKVVYIREGELVPIDNASPLEKIRLVRRQAKEKVFVTNCLRALR QVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGL VLAGQAN >gi|289775900|gb|GG745510.1| GENE 550 580966 - 581391 736 141 aa, chain - ## HITS:1 COG:lin1119 KEGG:ns NR:ns ## COG: lin1119 COG4910 # Protein_GI_number: 16800188 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, small subunit # Organism: Listeria innocua # 2 138 31 167 170 142 54.0 1e-34 MSEKTMRVQDYPLATRCPEHILTPTGKPLTDITLEKVLSGEVGPQDVRISRQTLEYQAQI AEQMQRHAVARNFRRAAELIAIPDERILAIYNALRPFRSSQAELLAIADELEHTWHATVN AAFVRESAEVYQQRHKLRKGS >gi|289775900|gb|GG745510.1| GENE 551 581394 - 581978 649 194 aa, chain - ## HITS:1 COG:mll6722 KEGG:ns NR:ns ## COG: mll6722 COG4909 # Protein_GI_number: 13475607 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Mesorhizobium loti # 13 191 572 751 756 118 43.0 8e-27 MQQTTQIQPSFTLKTREGGVASADERADEVVIGVGPAFDKHQHHTLIDMPHGAILKELIA GVEEEGLHARVVRILRTSDVSFMAWDAANLSGSGIGIGIQSKGTTVIHQRDLLPLSNLEL FSQAPLLTLETYRQIGKNAARYARKESPSPVPVVNDQMVRPKFMAKAALFHIKETKHVVQ DAEPVTLHVDLVRE >gi|289775900|gb|GG745510.1| GENE 552 581991 - 583658 2152 555 aa, chain - ## HITS:1 COG:lin1117 KEGG:ns NR:ns ## COG: lin1117 COG4909 # Protein_GI_number: 16800186 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Listeria innocua # 3 555 2 554 554 803 71.0 0 MKRSKRFAVLAQRPVNQDGLIGEWPEEGLIAMDSPFDPVSSVKVDNGLIVELDGKRRDQF DMIDRFIADYAINVERTEQAMRLEAVEIARMLVDIHVSREEIIAITTAITPAKAVEVMAQ MNVVEMMMALQKMRARRTPSNQCHVTNLKDNPVQIAADAAEAGIRGFSEQETTVGIARYA PFNALALLVGSQCGRPGVLTQCSVEEATELELGMRGLTSYAETVSVYGTEAVFTDGDDTP WSKAFLASAYASRGLKMRYTSGTGSEALMGYSESKSMLYLESRCIFITKGAGVQGLQNGA VSCIGMTGAVPSGIRAVLAENLIASMLDLEVASANDQTFSHSDIRRTARTLMQMLPGTDF IFSGYSAVPNYDNMFAGSNFDAEDFDDYNILQRDLMVDGGLRPVTEAETIAIRQKAARAI QAVFRELGLPPIADEEVEAATYAHGSNEMPPRNVVEDLSAVEEMMKRNITGLDIVGALSR SGFEDIASNILNMLRQRVTGDYLQTSAILDRQFEVVSAVNDINDYQGPGTGYRISAERWA EIKNIPGVVQPDTIE >gi|289775900|gb|GG745510.1| GENE 553 583952 - 584500 378 182 aa, chain + ## HITS:1 COG:SSO1224 KEGG:ns NR:ns ## COG: SSO1224 COG3193 # Protein_GI_number: 15898076 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Sulfolobus solfataricus # 64 176 23 134 139 90 41.0 2e-18 MAGDKITLTKIKQANRMVIVFYYHPLLTIRASVILVRERMMNKSQQVQTITLAAAQQMAA AVEKKATEIKVAVVFSVVDRGGNTLLIQRMDEAFVSSCDISLNKAWSACSLKKGTHEITS AVQPGQSLYGLQLTNQQRIIIFGGGLPVIFNEQVIGAVGVSGGTVEQDKLLAQCALDCFS AL >gi|289775900|gb|GG745510.1| GENE 554 584522 - 585685 1593 387 aa, chain + ## HITS:1 COG:MA2630 KEGG:ns NR:ns ## COG: MA2630 COG1454 # Protein_GI_number: 20091453 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Methanosarcina acetivorans str.C2A # 6 386 21 399 400 362 51.0 1e-100 MSYRMFDYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLR EAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGD LYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTQTKVKFVIVSWRNLPSVSIND PLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSN LQARENMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIAN PEKFADIAELMGENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLGVKEADFPYMAEM ALKDGNAFSNPRKGNEQEIAAIFRQAF >gi|289775900|gb|GG745510.1| GENE 555 585706 - 586059 283 117 aa, chain + ## HITS:1 COG:no KEGG:KP1_4786 NR:ns ## KEGG: KP1_4786 # Name: dhaG # Def: glycerol dehydratase-reactivation factor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 117 1 117 117 193 100.0 2e-48 MSLSPPGVRLFYDPRGHHAGAINELCWGLEEQGVPCQTITYDGGGDAAALGALAARSSPL RVGIGLSASGEIALTHAQLPADAPLATGHVTDSDDHLRTLGANAGQLVKVLPLSERN >gi|289775900|gb|GG745510.1| GENE 556 586060 - 586590 752 176 aa, chain + ## HITS:1 COG:STM2050_1 KEGG:ns NR:ns ## COG: STM2050_1 COG2096 # Protein_GI_number: 16765380 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 4 170 3 169 183 131 49.0 7e-31 MYRIYTRTGDKGTTALYGGSRIEKDHIRVEAYGTVDELISQLGVCYATTRDAGLRESLHH IQQTLFVLGAELASDARGLTRLSQTIGEEEITALERLIDRNMAESGPLKQFVIPGKNLAS AQLHVARTQSRRLERLLTATDRVHPLRDALKRYSNRLSDALFSMARIEETRPDACA >gi|289775900|gb|GG745510.1| GENE 557 586568 - 588493 2302 641 aa, chain - ## HITS:1 COG:ycgU KEGG:ns NR:ns ## COG: ycgU COG3284 # Protein_GI_number: 16129164 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Escherichia coli K12 # 1 638 4 641 642 961 73.0 0 MTVQTQDTGKAVSAVIAQSWHRCSKFMQRETWQTPHQAQGLTFDSICRRKTALLTIGQAA LEDAWEFMDGRPCALFILDETACILSRCGEPQTLAQLADLGFRDGSYCAESIIGTCALSL AAMQGQPINTAGDRHFKQALQPWSFCSTPVFDNHGRLFGSISLCCLVEHQSSADLSLTLA IAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNVQAARLLHLDA QASQGKNIADLVTLPALLRRAIKHARGLNHVEVTFESQHQFVDAVITLKPIVEAQGNSFI LLLHPVEQMRQLMTSQLGKVSHTFEQMSADDPETRRLIHFGRQAARGGFPVLLCGEEGVG KELLSQAIHNESERAGGPYIAVNCQLYADSVLGQDFMGSAPTDDENGRLSRLELANGGTL FLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ LYYALHSFEIVIPPLRARRNSIPSLVHNRLKSLEKRFSSRLKVDDDALAQLVAYSWPGND FELNSVIENIAISSDNGHIRLSNLPEYLFSERPGGDSTSSLLPASLTFSAIEKEAIIHAA RVTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQFKRKHQA >gi|289775900|gb|GG745510.1| GENE 558 588595 - 589692 1553 365 aa, chain - ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 363 1 363 367 430 59.0 1e-120 MLKVIQSPAKYLQGPDAAVLFGQYAKNLAESFFVIADDFVMKLAGEKVVNGLQSHDIRCH AERFNGECSHAEINRLMAILQKQGCRGVVGIGGGKTLDTAKAIGYYQKLPVVVIPTIAST DAPTSALSVIYTEAGEFEEYLIYPKNPDMVVMDTAIIAKAPVRLLVSGMGDALSTWFEAK ACYDARATSMAGGQSTEAALSLARLCYDTLLAEGEKARLAAQAGVVTEALERIIEANTYL SGIGFESSGLAAAHAIHNGFTILEECHHLYHGEKVAFGTLAQLVLQNSPMDEIETVLGFC QRVGLPVTLAQMGVKEGIDAKIAAVAKATCAEGETIHNMPFAVTPESVHAAILTADLLGQ QWLAR >gi|289775900|gb|GG745510.1| GENE 559 590302 - 591372 1509 356 aa, chain + ## HITS:1 COG:ycgT KEGG:ns NR:ns ## COG: ycgT COG2376 # Protein_GI_number: 16129163 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 1 355 11 365 366 651 87.0 0 MKKLINRVEDVLNEQLQGLAKAHPQLTLHQDPLYVTRTDAPVAGKVALLSGGGSGHEPMH CGYIGQGMLSGACPGEIFTSPTPDKMFECAMQIDGGEGVLLIIKNYTGDILNFETATELL HESGIKVTTVVVDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLEACAELGRRL NNLGHSIGIALGACTVPAAGQPSFTLKDDEMEFGVGIHGEPGIDRRRFSSLDQTVDEMFD TLLENGAYSRTLRQWDTVKGAWQEVKQSKTALQNGDRVIALVNNLGATPLSELYGVYHRL AQRCEASGIIIERNLIGSYCTSLDMSGFSITLLKVDDETLALWDAPVHTPALNWGN >gi|289775900|gb|GG745510.1| GENE 560 591383 - 592015 879 210 aa, chain + ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 353 83.0 1e-97 MSLNRTQIVDWLYRCGDIFTKESDFLTGLDKEIGDADHGLNMHRGFSKVVEKLPSIADKD IGFILKNTGMTLLSNVGGASGPLFGTFFIRAAQVTQAHQSLTLDELYLMIREGADGVVNR GKAEPGDKTMCDVWLPVADSLRQSSEQHLSIAAALDAACEVAERAAHATITMQARKGRAS YLGERSIGHQDPGATSVLFMVQMLAAAAKE >gi|289775900|gb|GG745510.1| GENE 561 592026 - 593447 1598 473 aa, chain + ## HITS:1 COG:ycgC_3 KEGG:ns NR:ns ## COG: ycgC_3 COG1080 # Protein_GI_number: 16129161 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 260 472 1 213 215 226 56.0 9e-59 MVNLVIVSHSARLGEGVGELARQMLINDGCKLAIAAGIDDPDSPIGTDPLKVMEAIESVA DTDHVLVMMDIGSALLSAETALDLLDPAIAAKVRLCAAPLVEGTLAATVSAASGAGIDKV IADAMSALEAKRVQLGLPSPTSDAAPAPTLADDGDTKSVSVIINNHNGLHVRPASKLVAA LAGFNADLLLEKNGKCVKPDSLNQIALLQVRRNDKLRLLARGPDADAALAAFQALAADNF GESPAAQPAAAPATPERVEGVALRYPLALIQPLRPAAADAAREQQRLRQAIDQTLADLIA LTELAENKFHADIAAIFAGHHTLLDDDDLFDAANDRLLTEQCSAEWAWHQVLMELSQQYR QLDDAYLQARYIDIEDILQRTLRHLQGIKQTLPTPGEPTIIIADNIYPSTVLQLDANLVK GLCLRDGSEQAHGAIIARAAGIVWLCQQGEALNDIQPGEAIALDMRNQRLIRD >gi|289775900|gb|GG745510.1| GENE 562 593523 - 595172 2066 549 aa, chain + ## HITS:1 COG:mll5296 KEGG:ns NR:ns ## COG: mll5296 COG2376 # Protein_GI_number: 13474417 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 3 547 2 541 547 420 51.0 1e-117 MSQFFFNQRASLVNDVIEGTIIASPWNNLARLESDPAIRVVVRRDLNKNNVAVISGGGAG HEPAHVGFIGKGMLTAAVCGDLFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGL AAEKARRLGYNVEMLIVGDDISLPDNKHPRGIAGTILVHKVAGYFAERGFNLATVLREAQ YAASHTASIGVALASCHLPQEADSAPRHQAGHAELGMGIHGEPGASTIATQNSAEIVNLM VEKLTAALPETGRLAVMLNNLGGVSVAEMAILTRELANTPLQARVDWLIGPASLVTALDM KGFSLSAIVLEEGIEKALLSDVETAGWQTPVQPRAVNIMPSTLASARVDFIPSGNPLVGD YVAQVTGALSGLEAHLNALDAKVGDGDTGSTFAAGAREIADLLQRQQLPLNDLPTLFALI GERLTVVMGGSSGVLMSIFFTAAGQKLGQGASVAEALNAGLEQMKFYGGADEGDRTMIDA LQPALAALLAEPENLQAAFAAAQAGADRTCQSGKAGAGRASYLNSDSLLGNMDPGAHAVA MVFKALAER >gi|289775900|gb|GG745510.1| GENE 563 595376 - 596152 1122 258 aa, chain - ## HITS:1 COG:ECs3952 KEGG:ns NR:ns ## COG: ECs3952 COG2375 # Protein_GI_number: 15833206 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Escherichia coli O157:H7 # 9 258 6 254 254 359 69.0 3e-99 MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLF FPEPGAAFTPPQVTEEGIDWGEGVRPATRDYTPLYDAERHELTYDFYIHDGGIASRWALE AKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRRLLGLRQLPARPQVTAIVTIA DASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE DESIDQQLVRSQAYWHSK >gi|289775900|gb|GG745510.1| GENE 564 596390 - 596944 706 184 aa, chain + ## HITS:1 COG:STM3215 KEGG:ns NR:ns ## COG: STM3215 COG1695 # Protein_GI_number: 16766514 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 38 184 68 215 215 179 66.0 3e-45 MRHHHEEGRGPRGRHGDPSEHGDHGRRGGGRRQRFFGHGELRLIILDILSRNASHGYELI KEIETLTQGNYSPSPGVIYPTLDLLQDQGLISVEDDNGRKKIVISEEGKQLHAENQEHLA HIQERLQARMVGCELRRDPQMKRALENFKAVLDLKVNQQASSAAQLKQIIGIIDRAAMEI SQLD >gi|289775900|gb|GG745510.1| GENE 565 597292 - 598581 1636 429 aa, chain + ## HITS:1 COG:ECs3955 KEGG:ns NR:ns ## COG: ECs3955 COG4992 # Protein_GI_number: 15833209 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 429 68 496 496 820 94.0 0 MKALNQEVREYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGG FGIFNVGHRNPVVVSAVENQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSG TESVEAAIKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV PFGDINAMRTMLSECKKTGDDVAAVILEPIQGEGGVILPPQGYLPAVRKLCDEFGALLIL DEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHT TTFGGNPLACAAALATINVLLTQNLPAQAAQKGDMLLDGFRLLAQEYPDLVNEVRGKGML MAIEFVDNEIGYDFASEMFRQRVLVAGTLNNAKTIRVEPPLTLTLEQCEQVLKAARKALA ALRVSVEEA >gi|289775900|gb|GG745510.1| GENE 566 598629 - 598925 522 98 aa, chain - ## HITS:1 COG:ECs2125 KEGG:ns NR:ns ## COG: ECs2125 COG1359 # Protein_GI_number: 15831379 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 134 67.0 5e-32 MNVTLVEINIKPERVDEFLEVFRANHEGALQEPGNLRFDVLQDPEVKTRFFIYEAYKDDE AVLAHKKTPHYLACVEKLEEMMSQPRQKRSFIGLLPQV >gi|289775900|gb|GG745510.1| GENE 567 598922 - 599809 1359 295 aa, chain - ## HITS:1 COG:ECs2124 KEGG:ns NR:ns ## COG: ECs2124 COG1830 # Protein_GI_number: 15831378 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 477 76.0 1e-134 MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRLARIFNPHSNRTVMLAFDHGY FQGPTTGLERIDLSIAPLFADTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSN ECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVDAGNRYGMPVLAVTGVGKEM TRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW RAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK >gi|289775900|gb|GG745510.1| GENE 568 599821 - 600834 1668 337 aa, chain - ## HITS:1 COG:yneA KEGG:ns NR:ns ## COG: yneA COG1879 # Protein_GI_number: 16129475 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 4 337 7 340 340 527 82.0 1e-149 MKTKRILQVSALALAMSVVTAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGVDVTYD GPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPEC RSIYINQGTPQQLGGLLVEMAEKQVSKPAAKVAFFYSSPTVTDQNQWVKEAKAKIEKEHP QWQIVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKRQGVAIV GFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADRLLKKGDLNVGDSVEVKDIGSLK VEPNSVQGYQYEAKGNGIVLLPERVVFSKENINNYDF >gi|289775900|gb|GG745510.1| GENE 569 600831 - 601835 1423 334 aa, chain - ## HITS:1 COG:STM4076 KEGG:ns NR:ns ## COG: STM4076 COG1172 # Protein_GI_number: 16767342 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Salmonella typhimurium LT2 # 4 323 7 326 333 375 68.0 1e-104 MKLKLNWESALLALLIAEILLFGALNPRMLDLNMLLFSTSDFICIGIVALPLTLVIISGG IDISLGSTIGLCAIALGVMTQAGWPLWLAVSLTLLLGLLCGLFNAALIHYTGISPLVITL GTLYLYGGGALLLSGMAGATGYEGIGGFPDSFTAFANLTLAGLPLPLVLFAIITFLFWLL AHRGRFGRHLFLLGQNPRAARYAALSVNGIPYVLYGLVGVASAVAALVMVSYFGSARSDL GRDLLMPALTAAVLGGANIYGGSGSILGTALAALLVGYLQQGLQMVGIPNQVSSALSGAL LVVVVMGRSLSLHREWVRATWRRLFSHRTIGAQQ >gi|289775900|gb|GG745510.1| GENE 570 601836 - 602870 1589 344 aa, chain - ## HITS:1 COG:YPO0411 KEGG:ns NR:ns ## COG: YPO0411 COG1172 # Protein_GI_number: 16120745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 322 2 323 351 389 70.0 1e-108 MKTLLKNRELSAFFAIVALFAVLVALNPAYFSLQTLAMIFASSQILCLLALGATLVMLTR NIDVSVGSSVGLCAIAVGVALNNGYGLATAIAFALAIGALAGAFNGLLVVGLRIPAIVAT LGTLGLYRGVMLLWTGGKWIEGLPDSLKSLSEPAFIGVSPLGWLVLALLLAGGWLLSRTA FGRDFYAVGDNLAAARQLGVAVNRTRMLAFTLNGMLAACAGIVFAAQIGFVPNQTGSGLE MKAIAACVLGGISLLGGTGTLLGAFLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVLLGVL VLDGRLRQALARHQRALKYSRFQPGNKGGKQVARFPERKSKEVA >gi|289775900|gb|GG745510.1| GENE 571 602867 - 604354 1804 495 aa, chain - ## HITS:1 COG:YPO0412 KEGG:ns NR:ns ## COG: YPO0412 COG1129 # Protein_GI_number: 16120746 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Yersinia pestis # 3 492 10 504 527 602 62.0 1e-172 MKPLLEARQICKQFSGVAVLKGIDFTLGAGQVHALMGGNGAGKSTLMKIIAGVETPDSGE LTIGDRAFARLSPALAHQLGIYLVPQEPMLFPNLSVRENILFRLPKRADTVARLQDKLRQ LNCQINLDASASTLEVADQQMVEILRGLMREARILILDEPTASLTPGETERLFSQIRALQ VLDVGIVFISHKLPEIRQLASHISVMRDGAVVLSGETAAYRDEQLINAMTPVSRDHALSD TQKLWLSLPGNRRTQPQDFPVLRVEDLTGEGFIDLNLEIRAGEIVGLAGLVGSGRTEFAE TLYGLRPPRAGRIWLENREISRDSIRARLASGLVYLPEDRQVSGLFLDAPVRWNTVMFNQ PSWWQQGKREAAVVERYHRALGIKLADGDQPVRTLSGGNQQKVLLARCLEANPLLLIVDE PTRGVDVSARADIYQLLKSVAAQNVAVLMISSDVDEFVGLADRVLVMHQGRYSGELARQA VTVDRMMTLAFGGQA >gi|289775900|gb|GG745510.1| GENE 572 604573 - 605544 1329 323 aa, chain + ## HITS:1 COG:STM4073 KEGG:ns NR:ns ## COG: STM4073 COG2390 # Protein_GI_number: 16767339 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Salmonella typhimurium LT2 # 16 321 11 316 319 384 65.0 1e-106 MSEKRITEENRYAGLALAEEELVARVAWCYYHDGLTQNDIGERLGLPRLKISRLLEKGRQ SGVIRVQINSRYEGCLALESELQQRFGLKIARVLPALNPPPMNTRLGIGAAQSLMGILQP GQLLAVGFGEATMSCLQHLSGFIGSQQVRLVTLSGGVGPYMTGIGQLDAACSVSIIPAPL RVSSAEVAEILRRESSVRDVILAATAADAAVVGIGAIDQRRDATILRSGYISEGEQLMYA RKGAVGDILGYFLQADGRPVEGLEIHRELLGVTLDELAQLPTIVGVAGGEEKAQAIYAAL TGKRINGLVTEETTARAVLALAS >gi|289775900|gb|GG745510.1| GENE 573 605582 - 606301 954 239 aa, chain + ## HITS:1 COG:YPO0415 KEGG:ns NR:ns ## COG: YPO0415 COG1070 # Protein_GI_number: 16120748 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Yersinia pestis # 3 237 13 247 530 374 79.0 1e-103 MSYLLALDAGTGSIRAVIFDLNGRQLAVGQAEWKHLSVDNVPGSMEFDLTTNWQLACQCI RQALNAAGLSAADIQSVACCSMREGIVLYDRDGEAIWACANVDARASREVAELKEIHDYR FESEVYEVSGQTLALSAMPRLLWLAHHRPDIYRKAATITMISDWLAAKLSGELAVDPSNA GTTGMLDLFSRDWRPALLDMAGLRADMLSPVKETGTLLGAVTEAAAHESGLRAGTPVAS >gi|289775900|gb|GG745510.1| GENE 574 607141 - 607980 822 279 aa, chain + ## HITS:1 COG:ydeV KEGG:ns NR:ns ## COG: ydeV COG1070 # Protein_GI_number: 16129470 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 267 264 530 530 441 79.0 1e-123 MRAGQTAVLGGTFWQQVVNLPQVRTDPQMNIRVNPHVIPGMAQAESISFFTGLTMRWFRD AFCAEEKLIAERLGVDAYSLLEEMASRVPAGSHGVMPIFSDAMHFKQWYHAAPSFINLSI DPEKCNKATLFRALEENAAIVSACNLAQISQFSGVTFESLVFAGGGSKGALWSQILSDVT GLPVRVPVVREATALGCAIAAGTGAGLYGDMASTGERLVSWHREFTPNPQHRELYQEMMS KWQTVYADQLGLVDSGLTTSMWQAPGLERRQRVASSPSP >gi|289775900|gb|GG745510.1| GENE 575 608162 - 610183 2418 673 aa, chain + ## HITS:1 COG:fadH_1 KEGG:ns NR:ns ## COG: fadH_1 COG1902 # Protein_GI_number: 16130976 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 4 355 3 354 354 627 86.0 1e-179 MSRYPSLFAPLELGFTTLKNRVLMGSMHTGLEELPDGAQRLAAFYAERARHGVALIVTGG IAPAPSGVTMAGGAVLNDASHLAHHRHITDAVHQEGGKIALQILHTGRYSYQPALVAPSA LQAPINRFTPHELSHDEILTLIDDFAHCAQLAREAGYDGVEVMGSEGYLINEFLAARTNQ RDDQWGGDYARRMRFAIEVVKAVRQRAGHDFIIIYRLSMLDLVNDGSTLAEVTELAKAIE AAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGAVSIPLITTNRINDPQVAEDI LARGDADMVSMARPFLADAEFMSKAQRDRAGEINTCIGCNQACLDRIFVGKVTSCLVNPR ACHETLMPVLPANAPKRLAVVGAGPAGLAFAVNAAARGHHVTLFDALPEIGGQFNIAKQI PGKEEFHETLRYYRTMLDLHGVDLRLNTRVTADDLLTFDETILATGIAPRLPAIDGIDHP KVLSYLDVLRDKAPVGAKVAIIGCGGIGFDTAMYLSQSGAATSQDIGEFCREWGIDTSLQ TAGGLSPDGPQLSKSPRQIVMLQRKASKPGEGLGKTTGWIHRATLLARGVKMIPAVSYEK IDDEGLHVTIGGERQLLAVDQVVICAGQEPRRELADPLRAAGKTVHLIGGCDVAAELDAR RAIAQGTKLALAI >gi|289775900|gb|GG745510.1| GENE 576 610293 - 611423 487 376 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 11 369 16 368 371 192 35 3e-47 MSQAELNGELFTLERFPPNAEEEALQAWEAADEYLLQQVNDVDGLTLIFNDGFGALACAL AARNPVSINDSFISELATRHNLRMNGIDEESVRFQDSLSPLPAAPALVLIKVPKQLALLE QQLRALREVVAPETRIIAAAKARDVHNSTLALFEKILGTTTTSLAWKKARLIHCVFTAPK LADAPPTYSWKLDGTPWTIHNHANVFARSGLDIGARFFLQHLPSDLEGEIADLGCGNGVI GLQALAQNPNASVMFTDESHMAVASSRLNVERNLPDDIARCEFMVNNSLSGIEPDRFTAI LCNPPFHQQHAITDHIAWQMFNDARRSLKYGGELYVVGNRHLDYFRKLKRAFGNCTTIAT NNKFVILKATKVRKQR >gi|289775900|gb|GG745510.1| GENE 577 611500 - 612840 544 446 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 5 440 8 513 522 214 28 8e-54 MNTARISIKEKFSYGLGDTGCNLVWQTVMLFMAWFYTDVFGLSPAHMGTMFLAVRVLDAV TDVLMGAVADRTRTKYGQFRPYILWFAIPFGVLCCLTFYTPDLGYSGKLIYAYVSYTLLS LVYTAINVPYCAMINNISNDSRERVSLQSWRFALSTLGGLIVSLTALPLVAWLGKGNLQN GYFYTMMVMGALSIVLFFICFGLTKERYSTDITANNQSSILDDLKTLLANKDWRILFTLN VVNLIAVLFKGGTTLYYVNNIMGRADLGSLLLTTTLASGVVGAMLSPFIFKNIDKVKGFK LSMALEAVLLIAMYFVPAGNVAAIFTLVIIINIIQLAATPLQWSMLSDIIDAEEKRSGKK LSGIVFSTNLFAIKLGIAIGGALVGYLLAWGDYVGGAAQQSASALQMIKLLFTLFPGVLV ALLIVIMNRYSLDDKRLSHMAQESGR >gi|289775900|gb|GG745510.1| GENE 578 612949 - 613815 581 288 aa, chain + ## HITS:1 COG:BH1906 KEGG:ns NR:ns ## COG: BH1906 COG2207 # Protein_GI_number: 15614469 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 18 273 16 286 299 72 24.0 7e-13 MSDESPVFEKIPVGAGELFTLRADNINDFNGINVVPHFHMMDELMWFRESGGSYSIGDEK FTIKNNTLVYVPALLIHEMTLPPAASHKRYLMQFEKEWLEGYDLSLPAAHCGAVVYLSGE EAERLELLLSWCSEFSDFSDSLFRSLMQSILLHAFNRLKDSVPVTERTHHRYLSELIELL QVINANENFEMTTEEAARRCQWSKSWFSRTFKSAFGISFKKFMLLRKLNIAVNLLTNTDL KISDISQSAGFTDSAYFCLKFKEMMNDTPQSFRHKIRSTDAVGSRAEK >gi|289775900|gb|GG745510.1| GENE 579 613945 - 615588 1029 547 aa, chain + ## HITS:1 COG:BH3683 KEGG:ns NR:ns ## COG: BH3683 COG3507 # Protein_GI_number: 15616245 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Bacillus halodurans # 2 539 5 524 528 434 43.0 1e-121 MIQNPVFRGFNPDPCICRRGDDYYVAVSSFEWFPGLPVYHSRDLKHWQLLTHVLTDDNNP DLKKLPSAKGIWAPSLTWCEEEKLFYVIYGVMNSMNSRYFDVDNYLITAEEITGPWSAPV YLHSAGFDASILHDHDGRKWIVSLEWETREGYEKPGAICLVEYSPQTHSVIGYPQRIWHG GTDRGCIEAPHLTRRGDYYYLMVAEGGTGYGHSVTMARATEVAGPYQGDPLNPIVTSWPE NFNERKDTGHLKPHYFNPETYLQKAGHGSYVETPTGEVWLTHLCSRPFRQELRCPLGRET ALQRMEWSEDGWLRLAAGGHLAQHQVEGSRLPPHPFPPKADLDDFDEPRVDNAFYAPRIH FQRFTCLTRKAGYLALRGQESLSSLNKVSLLAKKLTSVYANISTKMDFNPEIYQHSAGLV LYYDNMNYLFLHKTWDETSGAAQLAIIYMDNGKRHDDPQKIRLAEGEIYLAIAINGREVQ CSWSVDGEHYHPIGAVYDTSHFSDEYSRYGEFTGAFVGMACVDSMLHRKEALFDFFCYRA DEDAIIE >gi|289775900|gb|GG745510.1| GENE 580 615667 - 616167 620 166 aa, chain + ## HITS:1 COG:ECs3967 KEGG:ns NR:ns ## COG: ECs3967 COG1451 # Protein_GI_number: 15833221 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 164 13 176 179 272 82.0 2e-73 MSTLPYLHGYPESLLSQVTTLIEQDRLGEVLQKRYPQGHDVNSDKALYQYTQDLKARFLR GAAPINKVMYDSKIHVLNNALGLHTAISRVQGGKLKAKAEIRVATVFRDAPEAFLRMIVV HELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHLSLNRSA >gi|289775900|gb|GG745510.1| GENE 581 616241 - 617230 1104 329 aa, chain + ## HITS:1 COG:ygjR KEGG:ns NR:ns ## COG: ygjR COG0673 # Protein_GI_number: 16130982 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 328 7 334 334 535 80.0 1e-152 MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFANDYPVEHLFTSLDELAQ SPDVDAVYIASPNSLHFPQTRLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEA FKTASLPNFLLLKETLPKVGKLRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI GFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPSEI QGEDGTLVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVNHPGL TVSRITAKLSSEIRRQTGVIFPADTQPLA >gi|289775900|gb|GG745510.1| GENE 582 617502 - 618473 1306 323 aa, chain + ## HITS:1 COG:STM3224 KEGG:ns NR:ns ## COG: STM3224 COG0861 # Protein_GI_number: 16766523 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Salmonella typhimurium LT2 # 1 318 1 318 322 508 88.0 1e-144 MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGSHSMTMKQAAGWSILWVTLSLLFNAAFW WYLVQTQGRAVADPQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPPALQRRVLVYGVL GAIVLRTIMIFAGSWLISQFDWLLYVFGAFLLFTGVKMALAKEDDSGIGDKPLVRWIRSH LRMTDKIESERFFTRKNGVLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS NLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGVKMLIVDFYHIPVAISLGVVGGI LAVTLLINAWVNKQHDKQRKLPE >gi|289775900|gb|GG745510.1| GENE 583 618705 - 619952 1914 415 aa, chain + ## HITS:1 COG:STM3225 KEGG:ns NR:ns ## COG: STM3225 COG3633 # Protein_GI_number: 16766524 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Salmonella typhimurium LT2 # 8 415 7 414 414 622 89.0 1e-178 MTTRTPPSGWISRLAQGSLVKQILIGLVLGVLLALVSKPTAIAVGLLGTLFVGALKAVAP VLVLMLVMASIANHQHGQKTSIRPILFLYLLGTFSAALTAVLFSFVFPSTLHLTTAADSI TPPSGIVEVLRGLLMSMVSNPIDALLNANYIGILVWAVGLGFALRHGNDTTKNLINDVSH AVTFIVKVVIRFAPLGIFGLVSSTLATTGFETLWGYAQLLLVLVGCMLLVALVINPLLVF WKIRRNPYPLVLTCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATIN MAGAAITITVLTLAAVHTLNIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMF GIPNDVAMQVVAVGFIIGVLQDSCETALNSSTDALFTAAACIAEDDQLAKNALRS >gi|289775900|gb|GG745510.1| GENE 584 619968 - 620522 592 184 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0581 NR:ns ## KEGG: Kvar_0581 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 184 1 184 184 320 100.0 2e-86 MTAYWLAQGVGVIAFLIGITTFINRDERRFRLQLAVYSAIIGVHFFLMGAGSAGMSAGLN ALRTVISLRTRSLWVMTVFILLTLILGLGKLQHAMELLPIIGTVASTWALFRCKGLTVRC VMWCSTACWVTHNLWLGSIGGTLIEGSFLIVNGLNIIRFRRMQKRGIDPFKVENAVQEES PSAR >gi|289775900|gb|GG745510.1| GENE 585 620652 - 622139 1702 495 aa, chain - ## HITS:1 COG:ECs3973 KEGG:ns NR:ns ## COG: ECs3973 COG2721 # Protein_GI_number: 15833227 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli O157:H7 # 1 495 1 495 495 910 88.0 0 MQYIKIHSQDNVAVALADIAAGSVVTIDKDSVTLGQDIVRGHKFALRAIAKGENVVKYGL PIGHALADIAPGEHVHAHNTRTNLSDLDAYRYQPDRVAQPPQPADREVQIYRRANGDVGV RNELWILPTVGCVNAMARQMQNRFLKETYGAEDIDGVHLFSHTYGCSQLGDDHINTRTML QNMVRHPNAGAVLVVGLGCENNQVDAFRETLGEFDPQRVHFMVCQHQDDEVEAGVAHLHQ LYEVMRQDKRQPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPE MFGAEQLLMSHCRDEATFDKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSL GCTQKAGSSQVVDVLRYGERLKVHGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPY GGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFVDAIVAFANGKPTCNEQ NDFRELAIFKSGVTL >gi|289775900|gb|GG745510.1| GENE 586 622158 - 623570 1944 470 aa, chain - ## HITS:1 COG:uxaC KEGG:ns NR:ns ## COG: uxaC COG1904 # Protein_GI_number: 16130987 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Escherichia coli K12 # 1 470 1 470 470 959 95.0 0 MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQVAENYRFKNLYDIWLKGDHY KWRAMRTNGVPERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS PSTADEIWDQCNDLLAQDAFSARGIMKQMNVKMVGTTDDPIDSLEHHAVVAKDTSFDIKV LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQSALTKRLDHFAAHGCKVSDHA LDVVLFAEATDAELDAILARRLAGETLSAHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT RHEYFRRILCQMIGRWVAAGEAPADIALLGEMVKNICFNNARDYFAIELN >gi|289775900|gb|GG745510.1| GENE 587 624053 - 625354 1833 433 aa, chain + ## HITS:1 COG:ECs3975 KEGG:ns NR:ns ## COG: ECs3975 COG0477 # Protein_GI_number: 15833229 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 417 41 457 472 717 93.0 0 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELHISTQQYSYIIAAYSAAYTV MQPVAGYVLDILGTKIGYAFFAIAWAIFCGSTALAGSWGGLALARGAVGAAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGVLSFAWAIA WLIFYKHPRDQKKLSDEERDYIIGGQESQHQTNNAKKMSPWQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCIVGGYLPPLFQRWFGVNLIV SRKMVVTMGALLMIGPGMIGLFTSPYVAIALLCIGGFAHQALSGALITLSSDVFGRNEVA TANGLTGMAAWLASTMFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLKNKPADDD STPLSSRKPATQS >gi|289775900|gb|GG745510.1| GENE 588 625482 - 626258 928 258 aa, chain + ## HITS:1 COG:ECs3976 KEGG:ns NR:ns ## COG: ECs3976 COG2186 # Protein_GI_number: 15833230 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 258 6 263 263 456 90.0 1e-128 MEIIEPRRLYQQLAAELKTRIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEG YVEVRKGSGIHVISNHPKYQQVADESLEFANYGPFELLQARQLIESNIAEFAATQVTKQD IMKLMEIQEKARNEKCFRDSEWDLQFHVQVALATQNSALAAIVEKMWTQRVHNPYWKKLH EHIDLRTVDNWCDDHDQILKALLRKDPNAAKLAMWQHLENTKQMLFNETSDDFEFNADRY LFAENPVVHLDTAANSAK >gi|289775900|gb|GG745510.1| GENE 589 626600 - 627262 720 220 aa, chain + ## HITS:1 COG:STM3226 KEGG:ns NR:ns ## COG: STM3226 COG0586 # Protein_GI_number: 16766525 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 360 92.0 1e-99 MELLTQLLNALWAQDYETLANPSMIGMLYFVLFMILFLENGLLPAAFLPGDSLLVLVGVL IAKGAMGFPETLLLLTAAASLGCWLSYIQGRWLGNTRIVQNWLSHLPSHYHQRAHHLFHK HGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTSLGYLLGKTPV FLKYEDQLMSCLMLLPVALLVFGLIGSLVVLWKKKYRSRG >gi|289775900|gb|GG745510.1| GENE 590 627265 - 627648 487 127 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0574 NR:ns ## KEGG: Kvar_0574 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 127 2 128 128 246 100.0 3e-64 MVIKRPSLRQLSWLLGGSLVLCALFWLWLAVQQQEATLAIRPVGQGVSMPDGFSVWHHLD ANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSATAWLSRLR DAPHRLG >gi|289775900|gb|GG745510.1| GENE 591 627798 - 628166 336 122 aa, chain + ## HITS:1 COG:no KEGG:KPN_03525 NR:ns ## KEGG: KPN_03525 # Name: yqjC # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 122 1 122 122 130 98.0 2e-29 MKHRIALLLALTSLSASAIAASPCQEKEQDIQREISYAEKHHNQSRIDGLNTALRQVREN CSDSKLKADHQQKIAKQREEIAERQRDLQEARKKGDADKINKRQHKLNEAQQELKTLESR DY >gi|289775900|gb|GG745510.1| GENE 592 628212 - 628517 372 101 aa, chain + ## HITS:1 COG:STM3229 KEGG:ns NR:ns ## COG: STM3229 COG4575 # Protein_GI_number: 16766528 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 101 1 101 101 124 78.0 4e-29 MAKENVTDDLRAELKTLADTLEEVLNSSADKSKEEIGKLRSKAESALKESRARLGETSDA ILRQTRETAARADDYVRENPWTGVGIGAAVGLVLGVLLSRR >gi|289775900|gb|GG745510.1| GENE 593 628559 - 628918 399 119 aa, chain + ## HITS:1 COG:STM3230 KEGG:ns NR:ns ## COG: STM3230 COG5393 # Protein_GI_number: 16766529 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 118 14 131 132 140 77.0 5e-34 MFSIGQRIVTLLAEMVETRLRLVVVELEEEKANLFQLLIMTGLTLLFAAFGLMSLLVLVI WAVDAQYRLHVMIATTVVLLLAAAIVGILTLRKARRSTLLRLTRKELENDRALLEDDKP >gi|289775900|gb|GG745510.1| GENE 594 628915 - 629211 162 98 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0570 NR:ns ## KEGG: Kvar_0570 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 98 1 98 98 148 100.0 6e-35 MNGRQERERQKALLLRQIQQQRLELSACRRHWLEATAPLDRGWHTLLSLRSWLMVGSGLM AVWSIRHPHFLMRWTKRGLGLWSTWRMVRGILRQSSTH >gi|289775900|gb|GG745510.1| GENE 595 629568 - 629960 533 130 aa, chain + ## HITS:1 COG:STM3232 KEGG:ns NR:ns ## COG: STM3232 COG2259 # Protein_GI_number: 16766531 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 130 32 161 161 215 91.0 2e-56 MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGALLPLTILLEFGGGL AILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTIAGGYLLLAITGPGAF SIDRVLNKKW >gi|289775900|gb|GG745510.1| GENE 596 630036 - 631022 1246 328 aa, chain + ## HITS:1 COG:STM3233 KEGG:ns NR:ns ## COG: STM3233 COG0435 # Protein_GI_number: 16766532 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 327 1 327 328 615 88.0 1e-176 MGQLVDGVWQDTWYDTKSTGGRFKRSVSAFRNWLTADGAPGPAGEGGFAAEKDRYHLYVS LACPWAHRTLILRKLKGLEPFISVSVVNPLMLENGWTFADDFPGATGDQLYHHQFLYQLY LQADPHYTGRVTVPVLWDKKQQTIVSNESAEIIRMFNTAFDGLGARAGDYYPPALREKID ELNGWIYDNVNNGVYKAGFATSQQAYDEAVEAVFTSLERLEQILGQHRYLTGNQLTEADI RLWTTLVRFDPVYVTHFKCDKRRISDYLNLYGFLRDIYQMPGIAETVSIPHIRHHYYRSH KTINPTGIISIGPQQDLNEPHGRDQRFR >gi|289775900|gb|GG745510.1| GENE 597 631149 - 631517 501 122 aa, chain + ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 121 191 83.0 2e-49 MDWYLKALKNYIGFGGRARRKEYWMFILVNLILTGVLSIIDKMLGWQRAGGEGILTTIYG VLVFLPWWAVQFRRLHDTDRSAWWLLLLLIPVIGWLVILIFNCQRGTEGNNRFGPDPKPF SY >gi|289775900|gb|GG745510.1| GENE 598 631559 - 632455 1105 298 aa, chain - ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 527 93.0 1e-150 MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRVLLEAADKLTTDAEALSRGWETHLTIVTEALVPTPDLFPLIEKLA TKSNTQLSIITEVLAGAWERLEQGRADIVVAPDMHFRSSSEINSRKLYSVLSVYVAAPDH PIHQEPEPLSEVTRVKYRGVAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG VATMPYPLVEKDIAEGRLRVVSPEYTNEIDIIMAWRRDSMGEAKSWCLREIPKLFAGR >gi|289775900|gb|GG745510.1| GENE 599 632560 - 633261 659 233 aa, chain + ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 233 1 233 233 387 80.0 1e-108 MITTRTAKQCGQADFGWLQARYTFSFGHYFDPKLLGFASLRVLNQEVLAPGASFQARTYP KVDILNLILEGEAEYRDSDGNHVQAKAGEALLIATQPGVSYSEHNLSKEQSLTRMQLWLD ACPQRENPLQQKTEVVSAPLQLLASPEGENGSLQLRQQAWVYHIALEKGEQISVQLHGPR AYLQSIHGTVHAVAQEQQKQALTCGDGAFIRDEANITLVADTPLRALLIDLPV >gi|289775900|gb|GG745510.1| GENE 600 633286 - 633453 132 55 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0564 NR:ns ## KEGG: Kvar_0564 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 55 1 55 55 79 100.0 4e-14 MSKKKNRKKASPTPSAPTQPETAGVVSFGYDEMLSELEAIVVEAEIRLRDEESLA >gi|289775900|gb|GG745510.1| GENE 601 633527 - 633937 462 136 aa, chain - ## HITS:1 COG:STM0307 KEGG:ns NR:ns ## COG: STM0307 COG3678 # Protein_GI_number: 16763690 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 134 1 134 135 148 64.0 3e-36 MKLMTRIAFAALLTTGFSLSAQAADVQAAPAPAQDPIVQHLKLTSDQVAKIKSLHQQLEN NVQQISQQDIKDGALINVIDSGKWDEKAVKDQLAAFSKIDQQVRYYRVKYYFDVNQVLTP EQRTQVKKDLADALSE >gi|289775900|gb|GG745510.1| GENE 602 634249 - 634713 512 154 aa, chain + ## HITS:1 COG:no KEGG:KPK_0575 NR:ns ## KEGG: KPK_0575 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 154 1 154 154 301 99.0 6e-81 MLLRTRVLPLVFVISLLSGCGLASKAFYSAGDKLFQPGDDAVASMQTYSVAQFLQPFTLN PAKASSDYLGKWVKVRGVIVDIRRMSGIAGSYYFTVTMRDEQNKTDKRLTFNFGSHNSAD VEALSNGSIATIVGQVHQVQDSTIPTLQNPKVVK >gi|289775900|gb|GG745510.1| GENE 603 634784 - 634996 78 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVHDAIPKDRGLSVSFTFLCQNPAPAGFLLSESVTRMNNCPRRYTRRTRLIGQFHLFMQ KPHSGGVFAI >gi|289775900|gb|GG745510.1| GENE 604 636108 - 637253 1025 381 aa, chain - ## HITS:1 COG:ECs4002 KEGG:ns NR:ns ## COG: ECs4002 COG1929 # Protein_GI_number: 15833256 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 28 408 408 565 82.0 1e-161 MKIVIAPDSYKESLSATEVAQAIEKGFREIFPDAQYVSMPVADGGEGTVEAMIAATQGTE HSAWVTGPLGEKVEACWGMSGDGVTAFIEMAAASGLGLVPPEKRNPLITTSRGTGELILQ ALEHGAKRIIIGIGGSATNDGGAGMMQALGARLCDAEGQEIGHGGGSLSRLSRIDLSAID PRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHFADVIKASLQVD VKPIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRIDSQSI HGKVPVGIARVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTTVSTLEEAFRGAFD NIYRASRNIAATLQVGMTTEG >gi|289775900|gb|GG745510.1| GENE 605 637318 - 638208 1296 296 aa, chain - ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 296 4 299 299 507 96.0 1e-143 MTIKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETATTPKAIAEQCD VIITMLPNSPHVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREISEALRAKGVEMLDA PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVA LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR >gi|289775900|gb|GG745510.1| GENE 606 638235 - 639005 890 256 aa, chain - ## HITS:1 COG:STM3249 KEGG:ns NR:ns ## COG: STM3249 COG3836 # Protein_GI_number: 16766547 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 454 88.0 1e-128 MDNAIFPNKFKAALAAHQVQIGCWCALANPISTEVLGLAGFDWLVLDAEHAPNDVTTLIP QLMALKGSSSAQVVRVPTNEPIIIKRMLDIGFYNFLVPFVETAEQAAQAVASTRYPPEGI RGVSVSHRGNMFGTVPDYFAQSNKNISILVQIESQTGVDNVEAIAATEGVDGVFVGPSDL AAALGHLGNAAHPEVQHAIQHIFASAKKHGKPSGILAPVEADARRYLEWGATFVAVGSDL GVFRSATQKLADAFKK >gi|289775900|gb|GG745510.1| GENE 607 639032 - 640363 1552 443 aa, chain - ## HITS:1 COG:ECs4005 KEGG:ns NR:ns ## COG: ECs4005 COG0477 # Protein_GI_number: 15833259 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 443 1 444 444 725 86.0 0 MILDSTLDEKKGIPTRYLILLMIFVVTAVNYGDRATLSIAGTEVAKELGLSAVSMGYIFS AFGWAYLLMQIPGGWLLDKFGSKKVYSYSLFFWSLFTFLQGFIDVFPLAWAGVSMFFMRF MLGFSEAPSFPANARIVAAWFPAKERGTASAIFNAAQYFSLALFSPLLGWLTFALGWEHV FTVMGIIGFVLTVIWVKFVHNPTDHPRMSAAELKYISEGGAVVDMDHKKETTQAAGPKMD YIRQLLTNRMMLGVFFGQYFLNTITWFFLTWFPIYLVQDKGMSILKVGFVASIPALFGFA GGVLGGLFSDYLIGRGCTLTFARKLPIVLGMLLASSIILCNYTASTPLVITLMALAFFGK GFGALGWPVISDVAPKEIVGLCGGVFNVFGNVASIATPLVIGYIVSELHSFNGALIFVGG SALMMMVCYLFVVGDIKRMELQK >gi|289775900|gb|GG745510.1| GENE 608 640756 - 642327 1829 523 aa, chain + ## HITS:1 COG:STM3250 KEGG:ns NR:ns ## COG: STM3250 COG2721 # Protein_GI_number: 16766548 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Salmonella typhimurium LT2 # 1 523 1 523 523 995 94.0 0 MADIAIRQQSPTAFYIKVDPTDNVAIIVNDRGLTAGTRFPDGLTLVEHIPQGHKVALVDI PARGEIIRYGEVIGFAVRDIPQGSWIDESLVELPTAPPLNTLPLATKVPEPLPPLEGYTF EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG VAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLQGTEDVKSIPVDSASI VSLQDEKHVGFKSMVDDILQVAERHLVKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN PAVGYASDLLVRCGATVMFSEVTEVRDAIDLLTPRAINEEVGKRLLEEMAWYDNYLDMGK TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEE TIEDVGRKLFEFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT >gi|289775900|gb|GG745510.1| GENE 609 642382 - 643332 1083 316 aa, chain - ## HITS:1 COG:STM3251 KEGG:ns NR:ns ## COG: STM3251 COG0524 # Protein_GI_number: 16766549 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 315 1 315 315 499 76.0 1e-141 MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVG NDAFGEMNIARLEKDGVNVNGIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTAD HIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIENIKGRNGTVSFDPNIRKEMLNIPEMS QAFEYILDYTDIFLPSDGELDYFGLNPERNEQILVDNLLKRGVKHVVIKRGPRGASYFSA NETHHVAGFNVPVVDPTGAGDCFGATFVSLFLNGATPQEALRWANASGSLAISQRGPMEG TSTQAQIRAFLAAQHP >gi|289775900|gb|GG745510.1| GENE 610 643332 - 644171 647 279 aa, chain - ## HITS:1 COG:STM3252 KEGG:ns NR:ns ## COG: STM3252 COG1349 # Protein_GI_number: 16766550 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 274 1 275 277 336 61.0 4e-92 MAKPSTSLLKRRLDIAEIVRKNGEIKVDDLAEMLAVSGVTIRNDLNYLEQQGYLKRSFGG AIYTAQAGAPVAVMREAPAVRDKALETEMARQVAAQIEDGETLFLGQGSILRKVIPFLAN REELCLLLNDLGHVALAQEFLNGETVLLGGVLSGQGRIVEGDLALKALGHYRPSHALIAV DHIAEDGTLSVRNEATAHLLNEAVAQSERVIAIVASRPVYGEKRYAVGELQQISSVVTPQ VVAAEYHACFLAAGLTNSYTNNECLTWLNTALHKTNQER >gi|289775900|gb|GG745510.1| GENE 611 644484 - 645338 1011 284 aa, chain + ## HITS:1 COG:STM3253 KEGG:ns NR:ns ## COG: STM3253 COG0191 # Protein_GI_number: 16766551 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 491 85.0 1e-139 MYIISSKNMLLKAQRQGYAVPAFNIHNLETMQVVVETAAELRSPLILAGTPGTYSYAGTG NVVAIARDLAKKWDLPLALHLDHHEDLADITRKVQAGIRSVMIDGSHSPFEENVALVKSV VELSHRYDASVEAELGRLGGVEDDLVVDAKDALYTNPEQAREFVARTGIDSLAVAIGTAH GLYTAEPKLDFERLAAIRDCVDVPLVLHGASGLPDSDIRRAISLGVCKVNVATELKIAFS DALKAYFLENPGANDPRHYMKPAKAAMKEVVRKVIHVCGCEGQL >gi|289775900|gb|GG745510.1| GENE 612 645363 - 646277 639 304 aa, chain + ## HITS:1 COG:STM3254 KEGG:ns NR:ns ## COG: STM3254 COG1105 # Protein_GI_number: 16766552 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Salmonella typhimurium LT2 # 1 304 1 304 304 407 67.0 1e-113 MIHTLTLNTAIDMNIFCDPLQPAAVNRTRQTEYCPNGKGVNVSLVLHHYQQPTHVMGIFG GFTGRYIVEELRKQHINVTPAWVAEPTRINIFINDGRDEYKLVNPGARINDEGKEQILHH LQCVTPGDYLVISGSLPPGIESRFYSEILVLCQQKGCEVILDISHPVLRQLLEWHPLLIK PNDDELNEIFGLDVSSPQRVREAMQTLHQLGARNVLLTLGAQGLYFSNGEQLWFCSAPKI ELVSSACAGDAALGAFLSRWLNAGDIPQALALASATGADVAASAGLGKLNRTQELLQQLQ IVQL >gi|289775900|gb|GG745510.1| GENE 613 646288 - 647700 1396 470 aa, chain + ## HITS:1 COG:STM3255_2 KEGG:ns NR:ns ## COG: STM3255_2 COG1299 # Protein_GI_number: 16766553 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 128 460 1 333 350 572 91.0 1e-163 MKKIIAVTGCPTGIAHTFMAEEALKTAAKKLNVEIKVETNGASGVENAITPEDLTDIYGV IIAADKDVNAERFNGLPVIEVPVKEAIHHPAELINKVVNGQAQRRQGHSATTDLAEKYER ESFGRQIYKHLMSGVSNMLPFVVAGGILIAVSFLWGIYSADPNSPQYNVVAATLMKVGQQ AFSIMVPVFTAYIAWSISGRPGMVAGFVGGLLANATGAGFLGGIIAGFAAGYFMLLIRHL LDGLPRQYEGLKSIFIMPLIGVLVIGVMMVLLGQPVAAINNGMMNWLSSLQEANPILLGI VVGAMCSFDFGGPVNKAAYVTGTLLLGQGNYFFMAGVSAACITPPLVIALATTFFPKGFS EEERAAGMVNYILGCTHITEGAIPFAAKDPLRVIPMMMIASSISAVLSYSLHIQVPAPHG GFLILPLVSKPLMWVLCILAGSACGALMLGCWRLWQKRTDKATALAGAMK >gi|289775900|gb|GG745510.1| GENE 614 647711 - 648526 813 271 aa, chain + ## HITS:1 COG:STM3256_1 KEGG:ns NR:ns ## COG: STM3256_1 COG4668 # Protein_GI_number: 16766554 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Salmonella typhimurium LT2 # 1 151 1 152 156 156 57.0 3e-38 MQLTSADIGFDRQVKTKDEALQRVVAALTEAGHTQAAYLQGMREREGQISTYLGNGIAIP HGTPHSRDAVLKTGVKVLACPQGVDWGEEQTAYLIVGIAAQDNEHLDILRQLTHALGDDR VPDALTRADTPQAVLEILAGDIPLPAGEEPQPAPHFDEEATFTLRNPHGLHARPSAVLVK AVKQWRSQIQVENLDTRSAIVDAKNLMRVVSLGAKQGHRLHFMASGNDAQQALKAIGDAF NAGLGEIAAQPQQATQEAVKTKRSWLSRLFS >gi|289775900|gb|GG745510.1| GENE 615 648703 - 649974 1409 423 aa, chain + ## HITS:1 COG:STM3257 KEGG:ns NR:ns ## COG: STM3257 COG4573 # Protein_GI_number: 16766555 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Salmonella typhimurium LT2 # 1 423 1 423 423 748 85.0 0 MKDIISRHKSGEHIGICSVCSAHPLVIEAALRFDLSTNNKVLIEATSNQVNQFGGYTGMQ PADFRDFVYNIARTVGFPAERIILGGDHLGPNCWQDEPAAVAMEKSVDLIKAYVAAGFSK IHLDASMSCADDPVPLDPGVVAERAARLCQAAEETASAEQKRHLTYVIGTEVPVPGGEAS TIGSVHVTRAQDAAATLETHEAAFRKLGLEAALERVIAIVVQPGVEFDHTQIIHYQPQEA KALSAWIESTPMVYEAHSTDYQTRQAYRALVRDHFAILKVGPALTFALREAIFALAQMEN ELIAPESRSRVMEVIDEVMLNEPGYWKKYYRPTWSQAMVDIHFSLSDRIRYYWPHPRIRQ SVEKLIANLTDAKLPLGLISQYMPVQFERLSLNALNAEPHALILDKIQDVLRAYRYGCSS EIA >gi|289775900|gb|GG745510.1| GENE 616 649989 - 650456 433 155 aa, chain + ## HITS:1 COG:STM3258 KEGG:ns NR:ns ## COG: STM3258 COG1762 # Protein_GI_number: 16766556 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 149 1 149 154 223 83.0 1e-58 MSQLFVRTGIHFSSSQQALEHIGAEMLARGVVHDSYPAALLEREATFPTGIALEQHAVAI PHCEAVHAKSPAIYLIRPDAPVPFQRADDDGEIDVSLIIALIVENPAAQLKLLRRLFSEL QNPHTLEALLAASDDQLPVRFQQFILEPELNAVAS >gi|289775900|gb|GG745510.1| GENE 617 650483 - 650767 413 94 aa, chain + ## HITS:1 COG:STM3259 KEGG:ns NR:ns ## COG: STM3259 COG3414 # Protein_GI_number: 16766557 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 92 1 92 94 153 90.0 6e-38 MKRKVIVACGGAVATSTMAAEEIKELCADHNIELDLVQCRVNEIETYMDGADLICTTARV ERTFGDIPVVHGMPFVSGVGIEALQQKILGILAE >gi|289775900|gb|GG745510.1| GENE 618 650773 - 652155 1595 460 aa, chain + ## HITS:1 COG:STM3260 KEGG:ns NR:ns ## COG: STM3260 COG3775 # Protein_GI_number: 16766558 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Salmonella typhimurium LT2 # 1 456 1 453 457 772 93.0 0 MFSEIMRYILDLGPTVMLPIVIIIFSKLLGMKLGDCFKSGLHIGIGFVGIGLVIGLMLDS IGPAAKAMAEHFQINLHVIDIGWPGSSPMTWASQIALVAIPVAIVVNIVMLVTRMTRVVN VDIWNIWHMTFTGAMLHIATGSYWIGILGVVVHAAFVYKLGDWFAKDTRDFFGLEGIAIP HGSSAYLGPVAVLVDTIIDKIPGLNRIHFSADDIQKRFGPFGEPVTVGFVMGLVIGALAG YDLKSILQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARKRLQAKFGGQEFLIGLDPALL LGHTSVVSASLIFIPLTILIAVVVPGNQVLPFGDLATIGFFVAMAVAVHQGNLFRTLISG VIIMGITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQLFTWQNVVGF AVIGIIYLTGVLLTWRRARRFIAVEKAEKSAAPQQSTGMS >gi|289775900|gb|GG745510.1| GENE 619 652205 - 653248 1049 347 aa, chain + ## HITS:1 COG:STM3261 KEGG:ns NR:ns ## COG: STM3261 COG1063 # Protein_GI_number: 16766559 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 613 86.0 1e-175 MKSVVIHAEGNVCVEERPIPTLQTENDVLVKVVSSGLCGSDIPRIFAKGAHYYPITLGHE FSGYVESYGAAVTDLQPGDAVACVPLLPCFQCPQCQREYFPLCKQYQFVGSRSEGGNAEY VVVKRANLFRLPDQMPIDDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLALQCA RELGANSVTAIDINPQKLELAKALGATRVFNSREMSGQAIQQALEAIQFDQLVLETAGTP QTVTLAIEAAGPRAQLALVGTLHHDLTLPAATFGQILRKELNIVGSWMNYSGPWPGEEWQ TATRLLTEKRLQLAPLIAHRGDAESFAREVQALNGAPMQGKILLKLS >gi|289775900|gb|GG745510.1| GENE 620 653359 - 654132 758 257 aa, chain + ## HITS:1 COG:STM3262 KEGG:ns NR:ns ## COG: STM3262 COG1349 # Protein_GI_number: 16766560 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 414 85.0 1e-115 MNSFERRNKIVDMVNTQGSVLVLDLSNLFGISEVTIRADLRLLEEKGLLTRFHGGAARAG SDLTDAENQEVVLEDRYQLASDPKKRIAQAAVAMIREGMTVILDSGSTTLLIAEALVRMT NITVITNSLPAAFTLAENKDITLVVCGGTVRHKTHSMHGTIAERSLQGICADLMFVGADG IDATNGITTFNEGYSISSVMAAAAHQVIAVLDASKFNRRGFNQVLPMEKIDCVITDDGIS ENDRAALSSKKVELKIV >gi|289775900|gb|GG745510.1| GENE 621 654167 - 655168 290 333 aa, chain - ## HITS:1 COG:FN0971 KEGG:ns NR:ns ## COG: FN0971 COG3177 # Protein_GI_number: 19704306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 6 333 7 330 330 265 41.0 7e-71 MSRYQPPFSITPTVLNLVVEIGELLGHWSAKRGQTSPLLRKENRIRTIQASLAIEHNSLS MEQVTALLEGKRVLAPAKDIQEVRNAIRAYELMPGWHAANIRDLLTAHKTLMTGLVDRPG ALRGGNVGIYRGTQVVHMAPPAAQVPRLIADLLSWLEHTELHPLIASSVFHYEFEFIHPF ADGNGRMGRLWQTLILSHWRQELAWLPVETLIHHQQERYYDILGVCDKTSDCTLFVTWML QNILAALKEGLETSFVVSEEMSEEMSEEIDVKVAPPENAILRLLTGNPELTARALAEILG ISARTVERHLQGLQAKGRLIRIGAKKGGSWLVK >gi|289775900|gb|GG745510.1| GENE 622 655172 - 656035 1229 287 aa, chain - ## HITS:1 COG:ECs4027 KEGG:ns NR:ns ## COG: ECs4027 COG0313 # Protein_GI_number: 15833281 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 502 93.0 1e-142 MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINA RLFALHDHNEQQKAETLLAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLP GPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALEEEPRTLIFYESTHRLVESLE DICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE >gi|289775900|gb|GG745510.1| GENE 623 656099 - 658207 1886 702 aa, chain + ## HITS:1 COG:ECs4028 KEGG:ns NR:ns ## COG: ECs4028 COG3107 # Protein_GI_number: 15833282 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Escherichia coli O157:H7 # 1 702 1 678 678 833 66.0 0 MVPSIFLRSKPARCLPVLLATLLFAGCGTHTQDQSTAFMQGTSQANSSFYLQQMQQSTND SKTNWQLLAIRALLQEGKKQQAIDLYNQLPSNLNSTQAREQSLLAVEVKLAQNDYQGART LLAKLDPTSLDQPQQARYWQAQIDASQGKPSLTLLRALIAQQPLLSDAKQRQKNIDATWQ ALTSMPQDQANALVINADENTLQGWLDLQRMWFDNRNDPTLLKAGVKDWQTRYPQNPGAK MLPTALVNMQNYKPASTNKIALFLPLNGQASIFGRTIQQGFEAAKNGAPSVTGSAVPAQV AQAANVSGNDDVVSPSQAEVSDLTATGSRAEPVQAPAQDQAAPAAEPTAQAPAASATPQT TASPVTQPVTAPTAQPQPAVASAANPSAELKIYDTTSQPISQLLAQAQQDGATLVVGPLL KENVDDVIKSNTPLNVLALNQPEKVESRANLCYFALSPEDEARDAARHIHQQGKQTPLLL VPRGALGDRVVSAFADEWLKLGGASVLQQRFGSTAELRAGVNGGGGIALTGTPVSTLPSA QNSSLGSADEMPVSSGGSVDAAYILATPEQIAYIKPMIAMRNGSQNNVTLYASSRSAQGT AGPDFRLEMEGLQYSEIPMLAGSNPALMQQALSAVRNDYSLARLYAMGADAWSLANHFTQ MRQTPGFELNGNTGDLTATQDCVINRKLSWLKYQQGKIVPAS >gi|289775900|gb|GG745510.1| GENE 624 658165 - 658551 228 128 aa, chain + ## HITS:1 COG:yraN KEGG:ns NR:ns ## COG: yraN COG0792 # Protein_GI_number: 16131040 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Escherichia coli K12 # 1 128 1 129 131 177 72.0 5e-45 MAQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGAVTV FVEVRYRRSARYGDAAASVTPQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQ WLKNAFGE >gi|289775900|gb|GG745510.1| GENE 625 658577 - 659167 614 196 aa, chain + ## HITS:1 COG:ECs4030 KEGG:ns NR:ns ## COG: ECs4030 COG0279 # Protein_GI_number: 15833284 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 361 97.0 1e-100 MLDRIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRFETERPGLPAIALNTDNVVLTAIANDRLHDEIYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDD >gi|289775900|gb|GG745510.1| GENE 626 659177 - 659752 755 191 aa, chain + ## HITS:1 COG:STM3267 KEGG:ns NR:ns ## COG: STM3267 COG2823 # Protein_GI_number: 16766565 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 264 89.0 8e-71 MKALSPLAILLSALLLQGCVAAAVVGTAAVGTKAATDPRTVGTQVDDSTLELRVNSALSK DEQIKKQARINVTAYQGKVLLTGQSPTPDLSARAKQIAMGVEGTTEVFNEVRQGQPIGLG TASSDTWITTKVRSQLLSTDQVKSSNVKVTTENSEVFLMGLVTEREGRAAADIASRVSGV SRVTTAFTYIK >gi|289775900|gb|GG745510.1| GENE 627 659870 - 660910 1401 346 aa, chain - ## HITS:1 COG:ECs4032 KEGG:ns NR:ns ## COG: ECs4032 COG0701 # Protein_GI_number: 15833286 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 346 1 345 346 487 84.0 1e-137 MTGQSSSQAASPFQWWKPALFFLVVIVGLWFVKWQPYYGKAFTAAETHSIGKSILAQADA NPLKAAWDYAMVYFLAVWKAAVLGVLLGSLIQVLIPRDWLLRTLGQSRFQGTLLGAIFSL PGMMCTCCAAPVAAGMRKQQVSMGGALAFWMGNPLLNPATLVFMGFVLGWQFALVRLVAG LATVLIVATLVQKWVKEAATQPVAVPAAPSEAARDSFFSRWLRALWTLFWNTIPVYILAV LVLGAARVWLFPHADGAVDNTLFWVIAMAIAGCLFVIPTAAEIPIVQTMMLAGMGTAPAL ALLITLPAVSVPSLIMLRKAFPAKALWLTGGLVALCGAIVGALALV >gi|289775900|gb|GG745510.1| GENE 628 660986 - 661633 660 215 aa, chain - ## HITS:1 COG:ECs4033 KEGG:ns NR:ns ## COG: ECs4033 COG0702 # Protein_GI_number: 15833287 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 210 16 225 226 341 80.0 6e-94 MSQVLLTGATGLVGGHLLRLLQNEPSISTIAAPTRRPLAPAEGVFNPHDPQLTDALAQVV DPVDIVFCCLGTTRREAGSKEAFVHADYTLVIDTALAGKRLGAQHMLVVSAMGANAHSPF FYNRVKGEMEAALIEQAWPRLTIARPSMLSGEREKKRANETFLEPLFRLLPGNWKAIPAR DVAIALLAEALSPSQEGVQILTSSQLRERAAQQAE >gi|289775900|gb|GG745510.1| GENE 629 661762 - 662298 502 178 aa, chain + ## HITS:1 COG:ECs4034 KEGG:ns NR:ns ## COG: ECs4034 COG0693 # Protein_GI_number: 15833288 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 172 15 186 186 296 87.0 2e-80 MSKKIAVLITDDFEDSEFTSPADAFKLAGHQVVTIEKQAGKTVKGKQGEAEVAIDRAIDD VTPGEFDALLLPGGYSPDQLRGDERFVTFTRDFVNGGKPVFAICHGPQLLISADVIRGRK LTAVKPIVVDVKNAGGEFYDQEVVVDNEQLVTSRTPDDLPAFNREALRLLGAGITPPV >gi|289775900|gb|GG745510.1| GENE 630 662260 - 662703 614 147 aa, chain - ## HITS:1 COG:ECs4035 KEGG:ns NR:ns ## COG: ECs4035 COG3787 # Protein_GI_number: 15833289 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 229 74.0 1e-60 METLAAIGRWLSKQHVVTWCVSRDDELWCANAFYVYDPDTVAFYLLSDEHTRHGQMTGER AKVAGTVNGQPKTVALIRGVQFKGEIRRLSGDEEARMRQRYVKRFPVARMLSAPVWEIRP DEIKFTDNTLGFGKKLHWRRDAGAEQA >gi|289775900|gb|GG745510.1| GENE 631 662723 - 663043 135 106 aa, chain + ## HITS:1 COG:STM3271 KEGG:ns NR:ns ## COG: STM3271 COG2827 # Protein_GI_number: 16766569 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Salmonella typhimurium LT2 # 15 104 9 98 105 131 73.0 3e-31 MVHTPYHSDFVTVCWFLYLIRTADNRLYTGITTDVPRRFRQHQAGKGAKALRGKGDLLLA FSHEVGEHSLALRLEYRVKQLTKREKERLVAGEDAFDTLLARLKGD >gi|289775900|gb|GG745510.1| GENE 632 663030 - 663533 605 167 aa, chain - ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 268 82.0 2e-72 MLIRVEIGIDAPGIDALLRRTFGRDAEAQLVHDLREDGLITLGVVATDDEGQVIGYVAFS PVAVEGEELQWVGLAPLAVDEHYRGQGIGRQLVYEGLDSLNEFGYAAVVTLGDPDLYRRF GFEPAARFDLRCRWPDSAEAFQVHRLADDALEGVHGQVEYSDHFNRL >gi|289775900|gb|GG745510.1| GENE 633 663527 - 664051 704 174 aa, chain - ## HITS:1 COG:STM3273 KEGG:ns NR:ns ## COG: STM3273 COG3154 # Protein_GI_number: 16766571 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Salmonella typhimurium LT2 # 1 174 1 174 174 288 88.0 4e-78 MLDKLRSRLVHFGPSLLSVPVKLAPFALKRQVLEQVLSWQFRQALAEGELEFLEGRWLSI HVRDIGLLWYTSVVDGRLVVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG DTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGLKSPQKPEQTSVGEAC >gi|289775900|gb|GG745510.1| GENE 634 664273 - 665268 1214 331 aa, chain + ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 667 98.0 0 MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADIAMLEYAAERYPHIERHVSVQASA TNEEAIRFYHRNFDVARVVLPRVLSIHQVKQLARATPVPLEVFAFGSLCIMAEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDG ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVTQVAKVWRQAIDRCKADPQ NFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ >gi|289775900|gb|GG745510.1| GENE 635 665274 - 666152 1171 292 aa, chain + ## HITS:1 COG:ECs4040 KEGG:ns NR:ns ## COG: ECs4040 COG0826 # Protein_GI_number: 15833294 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 292 7 298 298 552 90.0 1e-157 MKYSLGPVLYYWPKETLEDFYQQAANSSADTIYLGEAVCSKRRATKVGDWIEMAKALAGS GKQVVLSTLALVQASSELGELKRYVANGEFLIEASDLGVVNLCAERKLPFVAGHALNCYN AVTLRLLLKQGMMRWCMPVELSRDWLANLLTQCEELGIRNQFEVEVLSYGHLPLAYSARC FTARSEDRPKDECETCCIKYPTGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELTSMHGL VDMVRLSPMGNETFAMLEAFRANENGAAPLDLTSNSDCNGYWKRLPGLVLQA >gi|289775900|gb|GG745510.1| GENE 636 666296 - 667303 1199 335 aa, chain + ## HITS:1 COG:STM3276 KEGG:ns NR:ns ## COG: STM3276 COG2141 # Protein_GI_number: 16766574 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 335 1 335 335 640 94.0 0 MTDKSVPFSVLDLAPIPQGSSAKEAFTHSLDLARLAESRGYHRYWLAEHHNMVGIASAAT SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPT MRALRRHMSGDVDNFPRDVAELVDWFDARDPNPHVRPVPGYGERIPVWLLGSSLYSAQLA AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPVENMHQLWSASEQYGVQQALSMSLVGDKTKVRHGLESILR ETEADEIMVNGQIFDHQARLHSFDLAMQVKEELLG >gi|289775900|gb|GG745510.1| GENE 637 667348 - 668592 1976 414 aa, chain - ## HITS:1 COG:STM3279 KEGG:ns NR:ns ## COG: STM3279 COG0814 # Protein_GI_number: 16766577 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 414 1 414 414 653 91.0 0 MATLTTTTTRPSLFGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSLAALVFTWFCMLHSGL MILEANLNYRIGSSFDTITKDLLGKGWNLVNGVSIAFVLYILTYAYISASGSILHHTFSE MSLNVPARAAGFGFALLVAFIVWMSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVEPTTL FNVAEKNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTITRCLIYGTLLALGLY VVWLLVTMGNIPRPQFIDIAQKGGNIDVLVQALSGVLNNRGLDLLLVVFSNFAVASSFLG VTLGLFDYLADLFGFDDSAMGRFKTALLTFIPPMIGGLVKPDGFLYAIGYAGLAATVWAA IVPALLARASRKRFGSPQFRVWGGKAMIVLILLFGLGNAVVHFLSSFNLLPVYQ >gi|289775900|gb|GG745510.1| GENE 638 668736 - 670667 2316 643 aa, chain - ## HITS:1 COG:STM3280 KEGG:ns NR:ns ## COG: STM3280 COG0513 # Protein_GI_number: 16766578 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 643 18 646 646 1008 92.0 0 MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD VETLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDREDRPKR ERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELPKGMP GEVLQHFTRTRILNKPMNMQLMGDAQPRTERRGGGERREGGRGFGGERREGGRSFGGERR EGGRGDGRRFSGERREGRAPRRDDAAAPRRDDSAGRRRFGGDA >gi|289775900|gb|GG745510.1| GENE 639 670845 - 671591 530 248 aa, chain - ## HITS:1 COG:ECs4044 KEGG:ns NR:ns ## COG: ECs4044 COG4785 # Protein_GI_number: 15833298 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Escherichia coli O157:H7 # 1 248 47 294 294 431 92.0 1e-121 MEQILASRALSDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYL TQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRAKLAQDDLLAFYQDDPNDPFR SLWLYIAERKLDEKRALEALRERLNKSDKEQWGWNIVEFYLGDISEKELMTRLKADATDN TSLAEHLSETNFYLGKYYLSLGDKDSATALFKLAVANNVHNYVEHRYALLELSLLGQEQD DLAESDQQ >gi|289775900|gb|GG745510.1| GENE 640 671838 - 673973 2033 711 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 8 696 8 698 714 787 58 0.0 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIDE FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEAPVAEQGE >gi|289775900|gb|GG745510.1| GENE 641 673932 - 674144 130 70 aa, chain + ## HITS:1 COG:no KEGG:KPK_0550 NR:ns ## KEGG: KPK_0550 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 70 1 70 70 119 100.0 5e-26 MLAVLEFTNDRIKQNSILFIYKSRHIKDIASIDPILCILATNDNLYPPLRMKPLISRANL CMKIITSNNT >gi|289775900|gb|GG745510.1| GENE 642 674216 - 674485 442 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206580210|ref|YP_002236424.1| ribosomal protein S15 [Klebsiella pneumoniae 342] # 1 89 1 89 89 174 100 5e-42 MSLSVEAKAKIVSEFGRGENDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYAALIERLGLRR >gi|289775900|gb|GG745510.1| GENE 643 674634 - 675578 1276 314 aa, chain - ## HITS:1 COG:ECs4047 KEGG:ns NR:ns ## COG: ECs4047 COG0130 # Protein_GI_number: 15833301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 561 89.0 1e-160 MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLG EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPLTFSDEQLAAALDSFRGETQ QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEIHCSKGTYI RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLEQLQALVDQAAAQDIPAAQLLDPL LMPMDSPASDYPLVAIPETSAVYFKNGNPVRQSGAPLNGLVRVMENESGKFLGMGEIDDE GRVAPRRLVVEYPA >gi|289775900|gb|GG745510.1| GENE 644 675578 - 675979 745 133 aa, chain - ## HITS:1 COG:ECs4048 KEGG:ns NR:ns ## COG: ECs4048 COG0858 # Protein_GI_number: 15833302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 235 97.0 2e-62 MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK DEAAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD DERRVNPDDSKED >gi|289775900|gb|GG745510.1| GENE 645 676082 - 678772 3074 896 aa, chain - ## HITS:1 COG:STM3286 KEGG:ns NR:ns ## COG: STM3286 COG0532 # Protein_GI_number: 16766584 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Salmonella typhimurium LT2 # 1 895 1 891 892 1323 94.0 0 MTDVTIKALASEIQTSVDRLIQQFADAGIRKSADDSVTAQEKQTLLTHLNREHGSAPDKL TLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARRE AEEAAKREAQLKAEREAAEQAKREVADKAKREAAEKDKVSNQHTDEMTKTAQAEKIRREN EAAELKRKSEEEARRKLEEEARRVAEEARRMAEENEKNWSETSDSPEDSSDYHVTTSQHA RQAEDDNDREVEGGRGRSRSSKAARPAKKGNKHAESKADREEARAAVRGGKGGKHRKGSA LQQGFQKPAQAVNRDVIIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETA QLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRST KVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDG VMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVS AKAGTGIDDLLDAILLQAEVLELKAVRNGMASGAVIESFLDKGRGPVATVLVREGTLHKG DIVLCGFEYGRVRAMRDELGREVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVA LYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTD EVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNL IDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDN VVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRSID >gi|289775900|gb|GG745510.1| GENE 646 678797 - 680284 1049 495 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 482 9 483 537 408 44 1e-112 MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFR RWLVVEEVTQPTREITLEAARYEDESMNVGDYVEDQIESVTFDRITTQTAKQVIVQKVRE AERAMVVDQFREHEGEIITGVVKKVNRDNITLDLGNNAEAVILREDMLPRENFRPGDRIR GVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVLEIKAAARDPGSRAKIAVKT NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT KYLDIDEDFATVLVEEGFSSLEELAYVPMKELLEIDGLDEATVEALRERAKNALTTLALA QEESLGDNKPADDLLNLEGLDRALAFKLAARGVCTLEDLAEQGVDDLADIEGMTDEKAGE LIMAARNICWFGDEA >gi|289775900|gb|GG745510.1| GENE 647 680312 - 680734 324 140 aa, chain - ## HITS:1 COG:STM3288 KEGG:ns NR:ns ## COG: STM3288 COG0779 # Protein_GI_number: 16766586 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 140 1 140 140 266 95.0 6e-72 MLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVMDVEDPITV AYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVE GKDEVFALSNIQKANLVPHF >gi|289775900|gb|GG745510.1| GENE 648 681357 - 682700 1950 447 aa, chain + ## HITS:1 COG:STM3290 KEGG:ns NR:ns ## COG: STM3290 COG0137 # Protein_GI_number: 16766587 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Salmonella typhimurium LT2 # 1 447 23 469 469 882 95.0 0 MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRA KEYGAEGARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKE DGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDSDFIDELGGRHEMSEFMIACG FDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDENVKIPAEEVTVR FEQGHPVALNGKTFADDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEV TLELRRGNDYSILNTVSDNLTYKAERLTMEKGDSMFTAEDRIGQLTMRNLDITDTREKLF GYAQSGLLSASSATGLPQVENLENKGK >gi|289775900|gb|GG745510.1| GENE 649 682872 - 683501 632 209 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0517 NR:ns ## KEGG: Kvar_0517 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 209 1 209 209 391 100.0 1e-107 MNIKPPIRPQKAIDRLIDVLEPHATPVNAIARKRLTWEYKGKTQLFIFKKGELSIIRNSD KLLMVTVYEPHLFGVAEMLQPSRSHSLRAEVSSELLRIDYDLASALFRQHNLWEEVTSLL AYHTSYLVYRDDLVLQQRTYSVIRNHLLEMMLLTAETRLRVSILEYIQDRTHLSRSSILN VLSALKKGGYIAFARGGYLQSITSLPEKF >gi|289775900|gb|GG745510.1| GENE 650 683851 - 684402 617 183 aa, chain + ## HITS:1 COG:no KEGG:KPK_0539 NR:ns ## KEGG: KPK_0539 # Name: not_defined # Def: outer membrane protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 183 1 183 183 303 97.0 2e-81 MKSIAPKLFAVMIALGASSAVCASVNLHGEAGAEFTNLSASFGAGEPGMTFNTQWAHSDN DGDSVGLGMGYNFNLGPFLMTLGGKGVYLNPKDGDEGYAIAAGGGAELPLGQYFTLFGEG YYSPDSMSSGVDDYVEANAGLRINVLPSLNIEAGYRYIDMAGKDGNRDNTLADGAYAGVN FRF >gi|289775900|gb|GG745510.1| GENE 651 684444 - 684845 363 133 aa, chain - ## HITS:1 COG:no KEGG:KPK_0538 NR:ns ## KEGG: KPK_0538 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 133 1 133 133 248 100.0 6e-65 MNKIGLLIVAGVLGLAGCSSTSPSQTVETINALTVPVSHSEPGATANNAQAVTRYFQDNT ALIGRLNHSLKNHYLQDVERRDVFDRHSEAYQVYGALTRLEQMASMNDVYRKENNVAGLQ EINRVLKSVPLAS >gi|289775900|gb|GG745510.1| GENE 652 685086 - 685415 264 109 aa, chain - ## HITS:1 COG:STM3293 KEGG:ns NR:ns ## COG: STM3293 COG1314 # Protein_GI_number: 16766589 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Salmonella typhimurium LT2 # 1 108 1 109 110 169 90.0 8e-43 MYEALLVVFLIVAIGLVGLVMLQQGKGADMGASFGAGASGTLFGSSGSGNFMTRMTGILA ALFFIISLALGNINSNKTSKGSEWDNLSAPKTEQTQPTAPAQPTSDIPH >gi|289775900|gb|GG745510.1| GENE 653 685645 - 686982 1824 445 aa, chain - ## HITS:1 COG:STM3294 KEGG:ns NR:ns ## COG: STM3294 COG1109 # Protein_GI_number: 16766590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Salmonella typhimurium LT2 # 1 445 1 445 445 783 92.0 0 MSNRKYFGTDGIRGRVGDAPITPEFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSASFTGPMPTPAIAYLTRAFRAEAGIVISASHNPFYDNGIKFFSIEGTK LPDDVEEAIEAEMEKELTCVDSAELGKASRIVDAAGRYIEFCKGTFPNELSLGTLKVVVD CAHGATYHIAPNVFRELGAQVIAMGCEPDGLNINEEVGATDVRALQARVLAEKADLGIAY DGDGDRVIMVDHEGNKVDGDQILYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP FARAKVGDRYVLEMLQEKGWRIGAENSGHVILLDKTTTGDGIVASLQVVAAMVRNHMSLH DLCSGMKMFPQLLVNVRFTEGSGNPLENEHVKAVTAEVEAALGKRGRVLLRKSGTEPLIR VMVEGEHEDQVHEFAHRIAEAVKSV >gi|289775900|gb|GG745510.1| GENE 654 686975 - 687823 854 282 aa, chain - ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 16 297 297 503 89.0 1e-142 MKLVAQGSTLDLSHPHVMGILNVTPDSFSDGGAHNSLVEAVKHANLMINAGATIIDIGGE STRPGAAEVSVEEELARVIPVVEAIAQRFEVWISVDTSKPEVIRESARAGAHIINDIRSL TEPGALQAAAETGLPVCLMHMQGQPKTMQEAPKYEDVFADVECFFAEHIVRCEQAGIAKE KLLLDPGFGFGKNLSHNYQLLARLGEFHHFGLPLLVGMSRKSMVGQLLNVGPSERLNGSL ACAVIAAMQGAQIIRVHDVKETVEALRVVEATLAAKGKKRYE >gi|289775900|gb|GG745510.1| GENE 655 687922 - 689865 1680 647 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 599 1 597 636 651 56 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREIN VTKKDSNRYTTYIPVNDPKLLDNLLTKNVKVIGEPPEEPSLLASIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVGELVEYLREPSRF QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFS GADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEE IIYGPEHVSTGASNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHM SDETARIIDQEVKSLIERNYGRARQLLNDNMDILHAMKDALMKYETIDAPQIDDLMARRD VRPPAGWEEPGSSNNSDNNGTPRAPRPVDEPRTPNPGNTMSEQLGDK >gi|289775900|gb|GG745510.1| GENE 656 689956 - 690585 325 209 aa, chain - ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 397 96.0 1e-111 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTIVDLGA APGGWSQYAVTQIGNSGRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSKVQV VMSDMAPNMCGTPAVDIPRAMYLVELALEMSRDVLAPGGSFVVKVFQGEGFDEYLREIRS LFTKVKVRKPDSSRARSREVYIVATGRKP >gi|289775900|gb|GG745510.1| GENE 657 690709 - 691002 440 97 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Erwinia tasmaniensis Et1/99] # 1 97 1 97 97 174 91 9e-42 MNLSTKQKQHLKGLAHPLKPVVMLGNNGLTEGVLAEIEQALGHHELIKVKIASEDRETKA LIVEAIVRETGACNVQVIGKTLVLYRPTPERKISLPR >gi|289775900|gb|GG745510.1| GENE 658 691155 - 691631 699 158 aa, chain - ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 279 93.0 2e-75 MQAIPMTLRGAEKLREELDYLKSVRRPEIIAAIADAREHGDLKENAEYHAAREQQGFCEG RIKDIEAKLSNAQVIDITKMPNNGRVIFGSTVSVLNLDTDEEQTYRIVGDDEADFKQNLI SVNSPIARGLIGKEQDDVVTIRTPGGEVEYEITKVEYL >gi|289775900|gb|GG745510.1| GENE 659 691867 - 693300 1334 477 aa, chain + ## HITS:1 COG:dacB KEGG:ns NR:ns ## COG: dacB COG2027 # Protein_GI_number: 16131072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Escherichia coli K12 # 1 477 1 477 477 870 90.0 0 MRFPRFIIGLTAGIALSAQAANIDEYINQLPAGANLAFMAQKVGASTPEIDYHSQQMALP ASTQKVITALAALLQLGPDFRFTTTLETKGSLDGGVLKGDLIARFGGDPTLKRQDIRNMV ATLKKAGVQRIEGNVLIDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS AQKPGDLAFIRVASYYPVTMFSQVRTLARGSAEAQYCELDVVPGDLNRYTLTGCLPQRSE PLPLAFAIQDGASYAGAILKAELTQAGITYSGTLLRQTLANDPGTVLATTQSAPLHDLLR IMLKKSDNMIADTVFRTIGHARFGVPGTWRAGSDAVRQILRQQAGVDLGNTIIADGSGLS RHNLIAPATMMQVLQYIAQHDTELNFISMLPLAGHDGSLQYRAGLHQAGVDGKVSAKTGS LQGVYNLAGFITTASGQKVAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDLYQNN >gi|289775900|gb|GG745510.1| GENE 660 693352 - 694530 837 392 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 347 1 341 345 327 50 9e-88 MKFVDEATILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWLEADENLNTLIDYR FEKSFRAERGQNGQSRDCTGKRGKDVTVKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG GWHGLGNTRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV LLHLIDIEPIDGSDPVENARIIIGELEKYSEKLASKPRWLVFNKIDLMDKAEAEAKAKAI AEALGWEDKFYLISAASQQGVKELCWDVMTFIIENPIVHVEEEQKPEKVEFMWDDYHRQQ LEEAEVEVEDDEDWDDDWDEDDEEGVEFIYKR >gi|289775900|gb|GG745510.1| GENE 661 694546 - 695511 751 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 303 1 300 306 293 49 8e-78 MKQQAGIGIILALTTAMCWGALPIAMKQVLEVMEPPTVVFYRFLMASIGLGAILAIKGKL PPLRIFRKPRWLVLLAIATGGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVVIL KERMRGTQVVGALMLLSGLVMFFNTSLIEIFTRLTDYTWGVIFGVAAATVWVSYGVAQKV LLRRLASQQILFLLYTLCTIALLPLAKPGVISQLSDWQLACLIFCGLNTLVGYGALAEAM ARWQAAQVSALITLTPLFTLLFSDLLSMAWPDVFARPMLNLIGYLGAFVVVAGAMYSAIG HRLWGRWRKREAVVPLPRSGE >gi|289775900|gb|GG745510.1| GENE 662 695604 - 695861 437 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972109|ref|YP_001337255.1| 50S ribosomal protein L27 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 85 1 85 85 172 100 2e-41 MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGRDHTLF ALTDGKVKFEVKGPKNRKFISIVAE >gi|289775900|gb|GG745510.1| GENE 663 695882 - 696193 524 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972110|ref|YP_001337256.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 103 1 103 103 206 100 2e-51 MYAVFQSGGKQHRVSEGQTVRLEKLDIATGEAVEFAEVLMIANGEEIKIGVPFVEGGVIK AEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA >gi|289775900|gb|GG745510.1| GENE 664 696454 - 697425 1300 323 aa, chain + ## HITS:1 COG:STM3305 KEGG:ns NR:ns ## COG: STM3305 COG0142 # Protein_GI_number: 16766600 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 322 1 322 323 582 91.0 1e-166 MNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVG YQGSAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAF QMMTQLGSLKILEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAASQ CAGMLADCSAEEERALQDYGRYLGTAFQLIDDLLDYSSDGERLGKNVGDDLNEGKPTLPL LHAMHHGTPDQAAMIRGAIEQGNGRHLLDAVLETMATCGSLEWTQKRAEEEADKAIAALQ ILPDTPWREALIGLAHIAVQRDH >gi|289775900|gb|GG745510.1| GENE 665 697622 - 697894 249 90 aa, chain + ## HITS:1 COG:STM3306 KEGG:ns NR:ns ## COG: STM3306 COG3423 # Protein_GI_number: 16766601 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 90 4 91 95 141 80.0 2e-34 MDKFIDWHPADIVAGLRKRGTSLAAESRRHGLSSSTLANALTRPWPKGELIIATALETQP WVIWPSRYHDPVTHEFIDRTQMMRQKKTDR >gi|289775900|gb|GG745510.1| GENE 666 697949 - 699208 1683 419 aa, chain - ## HITS:1 COG:murA KEGG:ns NR:ns ## COG: murA COG0766 # Protein_GI_number: 16131079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Escherichia coli K12 # 1 419 1 419 419 757 92.0 0 MDKFRVQGPTRLQGEVTISGAKNAALPILFSALLAEEPVEIQNVPKLKDIDTTMKLLSQL GAKVERNGSVWIDAGPVDVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGAR PVDLHISGLEQLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGTT IIENAAREPEIVDTANFLNALGAKIKGQGTDRITIEGVQRLGGGVYRVLPDRIETGTFLV AAAISGGKILCRNAQPDTLDAVLAKLRDAGADIETGEDWISLDMHGNRPKAVNVRTAPHP GFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHIPELIRMGAHAEIESNTAICHGVKQL SGAQVMATDLRASASLVLAGCIAEGTTIVDRIYHIDRGYERIEDKLQALGANIQRVKGE >gi|289775900|gb|GG745510.1| GENE 667 699262 - 699516 346 84 aa, chain - ## HITS:1 COG:STM3308 KEGG:ns NR:ns ## COG: STM3308 COG5007 # Protein_GI_number: 16766603 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Salmonella typhimurium LT2 # 1 84 14 97 97 160 91.0 6e-40 MENHEIQTVLMNALPLQEVHVSGDGSHFQVIAVGEMFDGMSRVKKQQSVYAPLMEYIADN RIHALSIKAFTPQEWARDRKLNGF >gi|289775900|gb|GG745510.1| GENE 668 699653 - 699943 378 96 aa, chain - ## HITS:1 COG:STM3309 KEGG:ns NR:ns ## COG: STM3309 COG3113 # Protein_GI_number: 16766604 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Salmonella typhimurium LT2 # 1 96 1 96 98 100 55.0 5e-22 MTGQLSWTREGETLALHGELDQDLLVPLWEARARATEGATIIDLSQTTRVDTAGLALLVH FVALIRRQGREAQLIAKSENLQTLIGLYNLPVDMIP >gi|289775900|gb|GG745510.1| GENE 669 699943 - 700578 1131 211 aa, chain - ## HITS:1 COG:STM3310 KEGG:ns NR:ns ## COG: STM3310 COG2854 # Protein_GI_number: 16766605 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 374 92.0 1e-104 MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIV DQELLPYVQVKYAGALVLGRYYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA PEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGNWQAYDMIAEGVSMITTKQNE WSDLLRTKGVDGLTAQLKAISAQPITLEQKK >gi|289775900|gb|GG745510.1| GENE 670 700597 - 701148 719 183 aa, chain - ## HITS:1 COG:STM3311 KEGG:ns NR:ns ## COG: STM3311 COG1463 # Protein_GI_number: 16766606 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 182 1 182 183 286 86.0 1e-77 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSLRTEPTYRLYATFDNIGGLKARSPVRI GGVVVGRVADITLDPKTYLPRVELDIDERYNHIPDTSSLAIRTSGLLGEQYLALNVGFED PDLGTTILKDGGTIQDTKSAMVLEDLIGQFLYNSKGGDNQNSGNDKAEAEGHTDATPAAG TTH >gi|289775900|gb|GG745510.1| GENE 671 701153 - 701935 892 260 aa, chain - ## HITS:1 COG:STM3312 KEGG:ns NR:ns ## COG: STM3312 COG0767 # Protein_GI_number: 16766607 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 423 95.0 1e-118 MLFNALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIII VSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGI DGGFFWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAIPTSAGISRATTRTVV HASLAVLGLDFVLTALMFGN >gi|289775900|gb|GG745510.1| GENE 672 701943 - 702755 249 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 11 235 23 252 329 100 31 1e-19 MSQTQANLVEVRGIRFSRGDRVIFDDISLSVPRGKITAIMGPSGIGKTTLLRLIGGQIPP DRGEILFDGENVPQMTRSRLYTVRKRMSMLFQSGALFTDLNVFDNVAYPLREHTQLPPAL LHTTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM GVLVKLISELNNTLGVTCIVVSHDVPEVLSIADYAYIVADKKIVAHGSAQSLRENTDPRV RQFIDGIADGPVPFRYPAGDYHHDLLGIGS >gi|289775900|gb|GG745510.1| GENE 673 702965 - 703942 1189 325 aa, chain + ## HITS:1 COG:STM3314 KEGG:ns NR:ns ## COG: STM3314 COG0530 # Protein_GI_number: 16766609 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Salmonella typhimurium LT2 # 1 324 1 324 325 405 79.0 1e-113 MLLATALLIIGLLLVVYSADRLVYAASILCRMLGIPPLIIGMTVVSIGTSLPEIMVSTTA SLHGQIDLAVGTALGSNITNILLILGLAALLRPFTVHSDILRRELPLMLLVSVLAGLVLY DGQLSRLDGLFLLALALLWLLFTIKIARLAERQGSDSLTREQLAELPREGSLPVALLWLG VAMIVMPMATRMVVDNTTVLANFFAISELTVGLTVVAIGTSLPELATAIAGARKGEDDIA IGNIIGANILNIALVLGLPALIAPGSFASEAFTRDYGVMLLVSLIFAVLCWRRQQQPGRL VGALLVGGFVVWLAMLFWTAPLFVE >gi|289775900|gb|GG745510.1| GENE 674 703957 - 704943 985 328 aa, chain + ## HITS:1 COG:STM3315_1 KEGG:ns NR:ns ## COG: STM3315_1 COG0794 # Protein_GI_number: 16766610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Salmonella typhimurium LT2 # 1 212 1 212 212 360 85.0 2e-99 MPQIDLPTDFDFQQAGRQVLEIEREGLAQLDQYINEDFTHACETIFRCGGKVVVMGMGKS GHIGRKMAATFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALLPVLK RQQVKLICITSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLE ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMT AVCDDDMNIIGIFTDGDLRRVFDTGVDMRNASIADVMTRGGIRIRPGTLAVDALNLMQSR HITCVLVADGDHLLGVVHMHDLLRAGVV >gi|289775900|gb|GG745510.1| GENE 675 704958 - 705524 695 188 aa, chain + ## HITS:1 COG:STM3316 KEGG:ns NR:ns ## COG: STM3316 COG1778 # Protein_GI_number: 16766611 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 307 82.0 7e-84 MNNADAQLATCYGPVSQAFLDRAAKIRLLILDVDGVLSDGLIYMGNHGEELKAFNVRDGY GIRCALTSGIEVAIITGRKAKLVEDRCQTLGITHLYQGQSDKLLAFRELVSKLAVRPDEV AYIGDDLIDWPVMAEVGLSVAVADAHPLLLPRANYVTRINGGRGAVREVCDLLLLAQGKL DEAKGQSI >gi|289775900|gb|GG745510.1| GENE 676 705521 - 706096 517 191 aa, chain + ## HITS:1 COG:STM3317 KEGG:ns NR:ns ## COG: STM3317 COG3117 # Protein_GI_number: 16766612 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 320 87.0 8e-88 MSKTRRWVIILLSLLALILIGLNLANTDDTAQPEVNPNDPTYKSEHTDTVVYSPEGALSY RLIAEHVEYFSDQEVSWFTKPVMTTFDTNKVPTWSIRADKAKLTNDRMLYLYGHVEVNAL APDSQLRKITTDNAQINLVTQDVTSDDMVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT SYEIQNKQTQP >gi|289775900|gb|GG745510.1| GENE 677 706065 - 706610 659 181 aa, chain + ## HITS:1 COG:STM3318 KEGG:ns NR:ns ## COG: STM3318 COG1934 # Protein_GI_number: 16766613 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 181 1 184 184 278 83.0 5e-75 MKFRTNKLSLKIALAGALLAASLPALAKTGDTDQPIHIESDQQSLDMQGNVVTFTGNVVV TQGTIKINADKVVVTRPGNEKGKEVIEGFGNPATFYQMQDNGKPVKGRASKMRYELQNDY VVLTGNAYLEQLDSNIKGDKITYLVKEQKMQAFSDKGRRVTTVLVPSELQDKSGNQQKKS N >gi|289775900|gb|GG745510.1| GENE 678 706617 - 707342 291 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 225 12 231 312 116 33 2e-24 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI IIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLTSEQREDRAKE LMEEFHIEHLRDSLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPQQILEDEQVKRVYLGEDFR L >gi|289775900|gb|GG745510.1| GENE 679 707390 - 708823 1533 477 aa, chain + ## HITS:1 COG:STM3320 KEGG:ns NR:ns ## COG: STM3320 COG1508 # Protein_GI_number: 16766615 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Salmonella typhimurium LT2 # 1 477 1 477 477 791 90.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEVEAKE VEDRESLDTVDALEQKEMPDELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQTL QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTIQIEDIVDSIGDDEIGLEEVEAVLK RIQRFDPVGVAAKDLRDCLLIQLSQFAKETPWLEEARLIISDHLDLLANHDFRTLMRVTR LKEEVLKEAVNLIQSLDPRPGQSIHTSEPEYVIPDVLVRKVSGRWTVELNADSIPRLKIN QQYAAMGNSTRNDADGQFIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|289775900|gb|GG745510.1| GENE 680 708846 - 709133 435 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 [Citrobacter youngae ATCC 29220] # 1 95 1 95 95 172 88 4e-41 MQLNITGHNVEITPAMRDFVTAKFSKLEQFFDRINQVYIVLKVEKVTQIADANLHVNGGE IHASAEGQDMYAAVDGLIDKLARQLTKHKDKLKQH >gi|289775900|gb|GG745510.1| GENE 681 709207 - 709692 497 161 aa, chain + ## HITS:1 COG:ECs4083 KEGG:ns NR:ns ## COG: ECs4083 COG1762 # Protein_GI_number: 15833337 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 2 161 3 163 163 277 91.0 6e-75 MNNDSALQLSNVLNQECTRSQVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKMG STGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHL HTLSLVAKRLADKAICRRLRAAQSDEELYEIITEAGSSDDA >gi|289775900|gb|GG745510.1| GENE 682 709738 - 710592 1122 284 aa, chain + ## HITS:1 COG:STM3323 KEGG:ns NR:ns ## COG: STM3323 COG1660 # Protein_GI_number: 16766618 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 548 97.0 1e-156 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARSLADRNISAAVSIDVRNM PESPEIFEQAMQNLPECFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKS >gi|289775900|gb|GG745510.1| GENE 683 710589 - 710861 360 90 aa, chain + ## HITS:1 COG:STM3324 KEGG:ns NR:ns ## COG: STM3324 COG1925 # Protein_GI_number: 16766619 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 145 94.0 2e-35 MTVKQTVEITNKLGMHARPAMKLFELMQNFDAEVLLRNDEGTEAEANSVIALLMLDSAKG RQIEVEASGPQEVEALAAVIALFNAGFDED >gi|289775900|gb|GG745510.1| GENE 684 710925 - 711650 779 241 aa, chain - ## HITS:1 COG:mtgA KEGG:ns NR:ns ## COG: mtgA COG0744 # Protein_GI_number: 16131098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 4 240 5 241 242 392 81.0 1e-109 MRLRVAPFALLKRLALRLLLIAAVFWGGGIALFSVLPVPFSAVMLERQVSAWLSGDVHYL AHSDWVGMDEISPWMGLAVIAAEDQKFPEHWGFDVSAIEKALAHNERHDTRIRGASTLSQ QTAKNLFLWDGRSWLRKGLEAGLTVGIETVWSKKRILTVYLNIAEFGDGIFGVEAAAQRY FHKPASQLTPGEAALLAAVLPNPIRYRADAPSGYVRSRQAWILRQMRQLGGEGFMREHKL Y >gi|289775900|gb|GG745510.1| GENE 685 711647 - 712300 978 217 aa, chain - ## HITS:1 COG:STM3327 KEGG:ns NR:ns ## COG: STM3327 COG3155 # Protein_GI_number: 16766622 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Salmonella typhimurium LT2 # 1 216 1 216 217 345 81.0 4e-95 MKKIGVVLSGCGVYDGSEIHEAVITLLAIARNGAQAVCFAPDKPQRDVINHLTGEPLTEQ RNVLVEAARIARGDILPLTQARAETLDALIVPGGFGAAKNLSSFAAEGSECQVDRDLQAL ALAMHQAGKPLGFMCIAPALLPKIFAFPLRITIGTDLDTADVVEEMGAEHVPCPVDDIVV DEENKVVTTPAYMLAENIAQAATGIEKLVARVLALSA >gi|289775900|gb|GG745510.1| GENE 686 712534 - 714873 3205 779 aa, chain - ## HITS:1 COG:ZarcB_1 KEGG:ns NR:ns ## COG: ZarcB_1 COG0642 # Protein_GI_number: 15803750 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 563 1 562 562 981 92.0 0 MKQIRMLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF FGLLITPWAVYFLSVVVEQLEESRQRLSRLVDKLEEMRERDLKLNVQLKDNIAQLNQEIG EREKAEAERETTLEQLKIEMKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC NRAMELLTGKSEKQLIHLKPQDVYSEEAAEKVLETDEKVFRHNVSLTYEQWLDYPDGRKA CFEIRKVPYYDRVGKRRGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG IVGLSRILLDTELTSEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTS FLADLENLSGLQAQQKGLRFVLEPSLPLPHKVITDGTRLRQILWNLISNAVKFTPQGGGV NVRVRYDEGDILHFEVEDSGIGIPEAEQDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRL ARNMGGDISVTSQPGKGATFTLTVHAPAIAEEVEDTLAEDDMPLPALNVLLVEDIELNVI VARSVLEKLGNSVDVAMTGKAALEMFEPGEYDLVLLDIQLPDMTGLDISRQLKQNFAADE LPPLVALTANVLKNKKEYLDAGMDDVLSKPLSVPALTAMIKKFWDAPEEEAQEAPAADLH KADAVLDTDMLEQYIELVGPKLINDGLAVFEKMMPGYMSVLESNLTARDQKGIVEEGHKI KGAAGSIGLRHIQQLGQQIQTPDLPAWSDNVAEWVEEMKSEWQNDVAVLKAWVAKAGKK >gi|289775900|gb|GG745510.1| GENE 687 715023 - 716105 1225 360 aa, chain - ## HITS:1 COG:L0020 KEGG:ns NR:ns ## COG: L0020 COG1312 # Protein_GI_number: 15673613 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Lactococcus lactis # 7 359 1 355 358 533 67.0 1e-151 MKQVITMQMTMRWFGPEEDKVSLEHIRQVPGVEGVVGALYDVAVGEVWPVDKIERLVSQA HAAGLKMEVIESVNIHDDIKIGLPSRDRYIANYQQTIRHLARFGVKVICYNFMPVFDWMK TDMNYVLPDGSLTMAFEKKDIDKRLEDVVKEVLENSNGFALPGWEPERLAEVQTLFAKYS AVDDHKLRENLVYFLRAVIPVCEEVGVKMAIHPDDPPYSIFGLPRVVKNRDDLDWICRAV DSPANGITLCTGSIAEDPDNDVYAILAEFTRRKRIHFAHVRNIKLIRDKDFYECAHPSEY GSLDMYKVMQALYDNGFDGYIRPDHGRFIWGETGRPGYGLYDRALGVTYLKGLWEALSKR >gi|289775900|gb|GG745510.1| GENE 688 716376 - 717392 953 338 aa, chain + ## HITS:1 COG:rspB KEGG:ns NR:ns ## COG: rspB COG1063 # Protein_GI_number: 16129538 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 335 1 335 339 474 64.0 1e-134 MRSVIVKEPGQLNIASRPVPVPGSHEVRVKIAFAGICGSDVHIYQGHNPFAKYPRVIGHE FFGIVDAVGEQVSPARIGERVAVDPVVSCGHCYPCSVGRPNVCAQLQVIGVHRDGGFSDY ACVPAKNAWRIPEAISDRQATMVEPFTIAANITAQLQPTPQDIALVYGAGPMGLTVIQAL KGVYGVKQVIVVDRIAERLQMARDNGADLTLDNTHQPLADQLAQRQIAPTLVIDAACHPA ILQEAILLASPAARIGILGFSGEASTLTQQSITSKEISIFSSRLNSGRFPLVIDWMEKGL IHPEALITHCMPLEQVKEAMEIFANDRKTCCKVLLQLG >gi|289775900|gb|GG745510.1| GENE 689 717479 - 718762 1285 427 aa, chain + ## HITS:1 COG:STM1543 KEGG:ns NR:ns ## COG: STM1543 COG0477 # Protein_GI_number: 16764888 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 3 427 4 425 428 454 55.0 1e-127 MGKNIRWIIVLLLFLVYMINYLDRVALSITVPMIEKDLALNAEQFGMIFGSFFFGYAVFN FIGGLAVDKFGATLVMGLAVGLWSLFCGLTAVATGFYSMLVLRVLFGMAEGPICASANKM INGWFPKKQAATAVGFLSAGSPLGGAVAGPIVGYLALAFGWRPAFMIIFAIGIVWMVVWF FIAANSPDKHKHVSQEELMLINKMKQEEDALETVENQTAHSLGYYLKQPIILVTAFAFFC YNYILFFFLSWFPSYLVQQHHLDIKQMSLTTMIPWIVGFVGLALGGYISDKIFNLTGRLL LSRKIVLVVCLLMAALCVGLAGTVSSVVPAVLLMSVSIFFLYVTGAIYWAIIQDVVHKSR VGGASGFIHLIGSVSGIVGPIVTGYIVQSTGKFDSAFILAGTIAALGAVLVLLVIKTPRM TMKASQA >gi|289775900|gb|GG745510.1| GENE 690 718809 - 719720 794 303 aa, chain - ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 299 9 307 309 571 90.0 1e-163 MFGGDLMRRYGEKVHKLTLHGGFSCPNRDGTLGRGGCTFCNVASFADEAQQHRSIAEQLA HQAQLVNRAKRYLAYFQAYTSTFAEVQVLRSMYRQAISQANIVGLCVGTRPDCVPEAVLD LLSEYHEQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTARLARARGLKVCAHLIVGL PGETQGHCLETLERVVATGVDGIKLHPLHIVKGSIMAKAWQAGRLNGIELEAYTVTAGEM IRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEQGAQGSALGRSWAVPL AEK >gi|289775900|gb|GG745510.1| GENE 691 720283 - 720540 98 85 aa, chain - ## HITS:1 COG:no KEGG:SPAB_04153 NR:ns ## KEGG: SPAB_04153 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 73 1 73 86 106 73.0 3e-22 MLHAGQCVYRGSHYLVARFAFYVGDQAETTVIPLKGFVVQHISEPPQALRTPSDTDCAQA QKEHGDGVCTSHSPSLNPFRIGTQV >gi|289775900|gb|GG745510.1| GENE 692 720418 - 724878 5784 1486 aa, chain + ## HITS:1 COG:ECs4091_2 KEGG:ns NR:ns ## COG: ECs4091_2 COG0069 # Protein_GI_number: 15833345 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Escherichia coli O157:H7 # 379 1194 1 816 816 1558 93.0 0 MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRIVAEERGWRLAKNYAVGMLFLNKDPELAKAARRIVEEELQLETLSIVGWRDVP TNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLQEDKDFYVCSLS NLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIVRA MRLLVPPAWQNNPDMDPELRSFFDFNSMHMEPWDGPAGIVMSDGRYAACNLDRNGLRPAR YVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRAGRILHSAETDDDLKSRH PYKEWMEKNVRRLVPFEDLPEEEVGSRQLDDDTLASYQKQFNYSAEELDSVLRVLGENGQ EAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVF CEAEGQAHRLSFKSPILLYSDFKQLTTMEEEHYRADVLDITFNPAEASLSETVKALCDKA EQMVREGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDKSLRCDANIIVETASARDPH HFAVLLGFGATAIYPYLAYETLAKLVDSKAIDKAYRAVMLNYRNGINKGLYKIMSKMGIS TIASYRCSKLFEAVGLHREVSDLCFQGVVSRIGGAGFDDFQQDLLNLSKRAWLARKPLAQ GGLLKFVHGGEYHAYNPDVVQTLQKAVQSGEYSDYQQYAKLVNERPAATLRDLLALNPGE DAISIDDVEPAKELFKRFDTAAMSIGALSPEAHESLAEAMNSIGGFSNSGEGGEDPARYG TNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSV PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADL ITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGLDII KAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYF EFIARETRELMAQLGVKRLVDLIGRTDLLKELDGFTAKQQKLDLGKLLETAEPHPGKALY CTENNPPFDNGVLNAQLLQQAKPYVDEKQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQG LAGDPIVAHFSGTAGQSFGVWNAGGVELHLTGDANDYVGKGMAGGLLAIRPPVGSAFRSH EASIIGNTCLYGATGGRLYAAGRAGERFAVRNSGAITVVEGIGDNGCEYMTGGIVCVLGK TGVNFGAGMTGGFAYVLDEDGDFRKRVNPELVEVLDVDSLAIHEEHLRGLITEHVQLTGS QRGEEILANWPAFSAKFALVKPKSSDVKALLGHRSRSAAELRVQAQ >gi|289775900|gb|GG745510.1| GENE 693 724888 - 726306 1844 472 aa, chain + ## HITS:1 COG:STM3331 KEGG:ns NR:ns ## COG: STM3331 COG0493 # Protein_GI_number: 16766626 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 472 1 472 472 937 95.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKAFEMGWRPDLSGVKPTGKTVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLKEYDAVFLGVG TYQSMRGGLDNEDAPGVYDALPFLIANTKQIMGFGETADEPYVSMEGKRVVVLGGGDTAM DCVRTSIRQNAAHVICAYRRDEENMPGSKREVKNAREEGVEFQFNVQPLGVEVNANGKVC GVKMARTEMGQPDAKGRRRAEIVAGSEHVVPADAVVMAFGFRPHSMEWLAKHSVELDSQG RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGILNYLEV >gi|289775900|gb|GG745510.1| GENE 694 726362 - 727066 731 234 aa, chain - ## HITS:1 COG:nanE KEGG:ns NR:ns ## COG: nanE COG3010 # Protein_GI_number: 16131113 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Escherichia coli K12 # 1 228 1 228 229 302 74.0 4e-82 MSLLAQLDRRIRYYGGLIVSCQPVPGSPLDNPAIVAAMALAAEQAGAVALRIEGLANLQA VRPLVTVPVIALIKRDLHDSPVRITPWVEDVNALAQAGADIIAVDGTRRQRPASVASLLA AIHRQGKNAMADCSSLDDALECWQLGFDMVGTTLSGYTAEETPDEPDLALVKSLSAAGCR VVAEGRYNTPAQAAEAMRCGAWAVTVGSAITRLEHICGWYNSALKAAVCPANEQ >gi|289775900|gb|GG745510.1| GENE 695 727186 - 727680 586 164 aa, chain - ## HITS:1 COG:STM3341 KEGG:ns NR:ns ## COG: STM3341 COG2969 # Protein_GI_number: 16766636 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Salmonella typhimurium LT2 # 1 135 1 135 166 233 91.0 2e-61 MDVSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVLVPMEYARDGQIVLNIAPRAV GNLELANDEVRFNARFGGVPRNVSVPLAAVLAIYARENGAGTMFEPEAAYDEDVSSLNDD DVAPESESETVMSVIDGDKPDNHDDDPDDTPPPRGGRPALRVVK >gi|289775900|gb|GG745510.1| GENE 696 727684 - 728322 657 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 203 1 203 212 257 62 6e-67 MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMQRIEKDWYSLMNTIQSG TAAQADAARKQLREELLAIAPVFTQKPYFLSDEFSLVDCYLAPLLWRLPVLGVELVGAGA KELKGYMTRVFERDSFLASLTEAEREMRLGRG >gi|289775900|gb|GG745510.1| GENE 697 728634 - 729026 652 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762104|ref|NP_457721.1| 30S ribosomal protein S9 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 130 1 130 130 255 100 2e-66 MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRGELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|289775900|gb|GG745510.1| GENE 698 729042 - 729545 877 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238896727|ref|YP_002921472.1| ribosomal protein L13 [Klebsiella pneumoniae NTUH-K2044] # 1 167 1 167 167 342 100 2e-92 MSCEPQLTKRLGVHQRVTYYLGKLLMKTFTAKPETVKRDWYVVDATGKTLGRLATELARR LRGKHKAEYTPHVDTGDYIIVLNAEKVAVTGNKREDKMYYHHTGHIGGIKEATFEEMIAR RPERVIEIAVKGMLPKGPLGRAMYRKLKVYAGNEHNHAAQQPQVLDI >gi|289775900|gb|GG745510.1| GENE 699 729737 - 730867 1523 376 aa, chain - ## HITS:1 COG:ECs4105 KEGG:ns NR:ns ## COG: ECs4105 COG1485 # Protein_GI_number: 15833359 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 375 1 373 375 640 84.0 0 MQSLSPTSRYLLALKEGSHQPDDVQQEAVSRLDTIYQELQTQPAPVASGGGLRAKFGKLL GKREPVVEAAPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTTL QGHSDPLEIVADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPD ELYRNGLQRARFLPAIDAIKQHCDIMNVDAGIDYRLRTLTQAHLWLSPLNSETREQMDKL WLALAGAPRAAAGPTLEINHRELPTLGVENQTLAASFATLCVDARSQHDYIALSRLFHTV MLLDVPVMTAQLESEARRFIALVDEFYERHVKLVVSAAVPLYDIYQGERLKFEFQRCLSR LQEMQSEEYLKRPHMP >gi|289775900|gb|GG745510.1| GENE 700 731058 - 731456 573 132 aa, chain + ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 132 3 134 134 220 91.0 4e-58 MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQFELEKNKAELEEYREELVSHFARSA ELLDNMAHDYRQLYQHMAKSSNNLLPDSMADANPFRNRLEESEASNDQAPVQMPRDYSEG ASGLLRGGAKRD >gi|289775900|gb|GG745510.1| GENE 701 731630 - 732997 1786 455 aa, chain + ## HITS:1 COG:STM3348 KEGG:ns NR:ns ## COG: STM3348 COG0265 # Protein_GI_number: 16766643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Salmonella typhimurium LT2 # 1 455 1 455 455 671 82.0 0 MKKQTLLLSALALSIGLSLSALPPAAASLPTQVPGQGALPSLAPMLEKVLPAVVSVQVEG TASPTLNMPEELKKYFGDNAPQEQAQPFEGLGSGVIIDAAKGYVLTNNHVINQAQKISVQ LNDGREFDAKLVGSDEQSDIALLQLIKPANLTQIAIADSDKLRVGDFAVAVGNPFGLGQT ATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSI GIGFAIPSNMAKTLADQLIQFGEIKRGLLGIKGMEMSADIAKAMNLDVQRGAFVSEVLPN SGSAKAGIKSGDVIVSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRDGKPVDVEVTLDK STSSTASAELIIPALQGASFSDGQMKDGTKGVVIDNVDKGSAAAQVGLHKDDIIIGLNRE RIHSIAELRKVLEGKPPVIALNVIRGNESIYLLLR >gi|289775900|gb|GG745510.1| GENE 702 733085 - 734143 1304 352 aa, chain + ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 4 352 4 355 355 556 85.0 1e-158 MPGKLLRSILIGLIVGGLLLALMPSLRQWQLTPTTQNDTADDSPVSYNAAVRRAAPAVVN VYNRALNSTSHNQLTLGSGVIMDQRGYILTNKHVINDADQIIVALQDGRVFEALLVGSDT LTDLAVLKINATGGLPVIPINPKRTPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATK IMDKLIRDGRVIRGYIGISGREIAPLHAQGGGIDQIQGIVVNDVAPDGPAAQAGIRANDV IISVNDKPAVSALETMDQVAEIRPGSEIPVVIMRDDKKITLHIAVQEYPATN >gi|289775900|gb|GG745510.1| GENE 703 734169 - 734879 615 236 aa, chain - ## HITS:1 COG:STM0769 KEGG:ns NR:ns ## COG: STM0769 COG1767 # Protein_GI_number: 16764133 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Salmonella typhimurium LT2 # 1 236 1 232 232 271 64.0 1e-72 MNEAIACCPENRTSTREAVVDAMLASGDELAQLQPALNLLSPPLNATPGEALLASCYEAG ADHNADEATRAVIALPAAVVRSATPSLQRSGLLCMAAGALSARQLPLTHNRLCDVAGQFA RAIPEGDEEAGSGFYTVRSVSLPVYRRLRRDNHSHSVCLQQALLHLLAWKSESPWARQQA QRLLWQGGVLGEKGEFALLTLDDELRERQIVWPGLRSLLAVTGFLVRFPAGPVFSD >gi|289775900|gb|GG745510.1| GENE 704 734939 - 736240 2253 433 aa, chain - ## HITS:1 COG:STM3351 KEGG:ns NR:ns ## COG: STM3351 COG1883 # Protein_GI_number: 16766646 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 433 1 433 433 604 93.0 1e-173 MESLNALIQGMGLMHLGAGQAVMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG LALTALESLLAHHDPAQLAVIAAKLHCAPDVHAIKEALALALPSVQGQMETLAVDMGYSA GVLAIFYKVAIGSGIAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL NYFGIISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI MKALTSDRERKIRMVQLRTVSKREKILFPAVLLLLVALLLPDAAPLLGMFCFGNLMRESG VVERLSDTVQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILVLGVIAFCVGTAAGVLM AKLMNVFSRHKINPLIGSAGVSAVPMAARVSNKVGLEADGQNFLLMHAMGPNVAGVIGSA IAAGVMLKYVLAM >gi|289775900|gb|GG745510.1| GENE 705 736256 - 736459 205 67 aa, chain - ## HITS:1 COG:STM0055_2 KEGG:ns NR:ns ## COG: STM0055_2 COG0511 # Protein_GI_number: 16763445 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Salmonella typhimurium LT2 # 1 67 50 116 116 89 86.0 2e-18 MTAPLAGTIWKVLASEGQTVAEGEVLLILEAMKMETEIRAAQAGTVRGIAVKAGDAVAVG DTLLQLA >gi|289775900|gb|GG745510.1| GENE 706 736920 - 738437 2296 505 aa, chain - ## HITS:1 COG:STM0055_1 KEGG:ns NR:ns ## COG: STM0055_1 COG5016 # Protein_GI_number: 16763445 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Salmonella typhimurium LT2 # 1 475 1 475 475 858 92.0 0 MTVAITDVVLRDAHQSLFATRLRLDDMLPVAAQLDDVGYRSLECWGGATFDACIRFLGED PWVRLRELKKAMPKTPLQMLLRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMND PRNMQAALQAVRRHGAHAQGTLSYTTSPAHTLQTWLDLTEQLLETGVDSVAIKDMSGILT PHAAFALVSEIKKRYDVTLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPA TEALVATLAGTQYDTGLDIHKLESIATYFREVRKKYHAFEGQLKGTDSRILVAQVPGGML TNLESQLKQQSAAHRLDEVLAEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLTGERYKTI AKETAGILKGEYGRTPAPVNAALQARVLDGAEAITCRPADLLKPELAQLEADVRRQAQEK GITLAENAIDDVLTVALFPQPGLKFLENRHNPAAFEPVPQAEAAQPLAKAEKPAASGIYT VEVEGKAFVVKVSDGGDVSQLSAAS >gi|289775900|gb|GG745510.1| GENE 707 738453 - 738704 259 83 aa, chain - ## HITS:1 COG:STM0766 KEGG:ns NR:ns ## COG: STM0766 COG3630 # Protein_GI_number: 16764131 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit # Organism: Salmonella typhimurium LT2 # 3 83 2 81 81 89 75.0 1e-18 MTDNAVLLGEGFTLMFLGMGFVLVLLLLLIFAIRGMSLAVNRLFPEPPAAPKPAPAAVAP ADDFARLKPAIVAAIHHHRRLHP >gi|289775900|gb|GG745510.1| GENE 708 738846 - 739505 236 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 192 298 485 508 95 32 7e-41 PELHHYVSHRSGILMAKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGR ELPVNVAGGAILHAGPIVRPIKGSEDKFEMVSVGPTTSMRMEKFEKEFIARTGVKLIVGK GGMGKGTEEGCAEHKALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCRVKEFGP LIVSIDTHGNNLFEQNKVIFNQRKDIVADEICKHVSFIK >gi|289775900|gb|GG745510.1| GENE 709 739463 - 740362 240 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 26 284 26 288 508 97 25 7e-41 MSKSEQISRMTDIMARFVGYTGKVLPDDVTAKLKELHKKETSQLADVIFTTMIENQRLAK ELDRPSCQDTGVIQFLVECGANFPLIGELEALLRESVIKATVDSPLRHNSVETFDEYNTG KNVGKGTPTVFWEIVPNSDQCSIYTYMAGGGCSLPGKAMVLMPGAGYEGVTRFVLDVMTS YGLNACPPLLVGVGVATSVETAALLSKKALMRPIGSHNDNERAASLEKMLEDGINKIGLG PQGMSGNTSVMGVNIENTARHPSTIGVAVNVGCWSHRKGHIVFDKDLNYTITSHTGVAF >gi|289775900|gb|GG745510.1| GENE 710 740395 - 741663 1778 422 aa, chain - ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 1 422 1 422 422 636 92.0 0 MEPITITLCLLVFAIVMFVWEKVPLAVTSMVVCVALVVTGVLDLKQAFAGFIDSNVILFV AMFVVGGALFETGMANKVGGVITHFAKTEKQLIFTIMVVVGVMSGFLSNTGTAAVLIPVV IGVAAKSGFSRSRLLMPLVFAAALGGNLSLIGAPGNLIAQSALQNIGSGFGFFEYAKVGL PMLVCGILYFLTIGYKFLPNNPNSGEVGSVGEQRDYSHVPRWKQILSLVVLIATILGMIF EKQTGISLAVAGCIGALVLVVTGVLTEKQAYKAIDSQTIFIFGGTLALAKALEMTGAGKL VADQVIGLLGNNSSPFMLLVVVFALSVVMTNFMSNTATVALLVPVSLSIAAGMGADPRAV LMATVIGSSCAYATPIGMPANMMVLSAGGYKFVDYAKSGIPLIIVSTIVSLILLPILFPF HP >gi|289775900|gb|GG745510.1| GENE 711 741875 - 742540 662 221 aa, chain - ## HITS:1 COG:STM3357 KEGG:ns NR:ns ## COG: STM3357 COG1802 # Protein_GI_number: 16766652 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 220 1 220 221 367 92.0 1e-102 MQKPKLGKIKLLSAKEQVAAVLRKAILSRDLVEGQEITLEGIAKMVGVSSMPVREAFQIL AADGLIQVRPNKGAVVLGINEQTIREHYEIRAVLESEAVAKASRPGTDISRIAQVHYAAE KALADNNSAEYSDLNQAFHMEIWNAAGNEKMKMLLCNMWNGLSMGHKVTEEEYAVISLRE HKAILQALEQHNEALARQRMHEHIIRSMENMLTRYLPDPAP >gi|289775900|gb|GG745510.1| GENE 712 742527 - 743021 447 164 aa, chain - ## HITS:1 COG:STM3358 KEGG:ns NR:ns ## COG: STM3358 COG1802 # Protein_GI_number: 16766653 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 164 46 209 209 202 68.0 2e-52 MPVREALQSLEQEGFLVRLPNRHMQVSTLAVEDVSHIFRVIAVMAAELFALVPANQGELL RARAQELARAGDNAGELAFHQLLISYLDNRYLAKAYQQFLDGYISYVILYLKEDGQESAQ ILNELASAIGHGEGEKIAQATQRYFLMLAEIMRQHMKDWESAEA >gi|289775900|gb|GG745510.1| GENE 713 743288 - 744226 1263 312 aa, chain - ## HITS:1 COG:ECs4109 KEGG:ns NR:ns ## COG: ECs4109 COG0039 # Protein_GI_number: 15833363 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 536 94.0 1e-152 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTDVKIKGFSG EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACIGVITNP VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGV TILPLLSQIPGVSFSDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR AMQGEKGVVECAYVEGDGHYARFFSQPLLLGKNGVEERQSIGKLSAFEQQALEGMLDTLK KDIALGEDFVNK >gi|289775900|gb|GG745510.1| GENE 714 744641 - 745111 550 156 aa, chain + ## HITS:1 COG:ECs4110 KEGG:ns NR:ns ## COG: ECs4110 COG1438 # Protein_GI_number: 15833364 # Func_class: K Transcription # Function: Arginine repressor # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 278 94.0 3e-75 MRSSAKQEELVKAFKALLKEEKFSSQGEIVQALQEEGFENINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG ILGSIAGDDTIFTTPARGFTVKDLHDAILVLFEQEL >gi|289775900|gb|GG745510.1| GENE 715 745485 - 745748 354 87 aa, chain + ## HITS:1 COG:no KEGG:KP1_4962 NR:ns ## KEGG: KP1_4962 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 87 19 105 105 149 97.0 3e-35 MKIKTTVAALSILSVVSFGAFAADVINSEQAQGREAIGTVSVGAVASSPMDMHEMLNKKA QEEGASSYRIIEARTGDHWHATAELYK >gi|289775900|gb|GG745510.1| GENE 716 745847 - 746113 270 88 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0452 NR:ns ## KEGG: Kvar_0452 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 88 1 88 88 120 100.0 2e-26 MKRAMIIASLGLASVLSFGASAAVQQVNAEQAQNLQSMGTISVSQVGSAPMDMRQELAAK AEKEGASSYRIIEARTGDSWHATAELYK >gi|289775900|gb|GG745510.1| GENE 717 746307 - 746582 403 91 aa, chain - ## HITS:1 COG:STM3363 KEGG:ns NR:ns ## COG: STM3363 COG2732 # Protein_GI_number: 16766658 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 124 71.0 4e-29 MTTYTFDFDEIAEQQDFYREFSRTFELAQDKVNNLDSLWDAVTGGLLPLPLDIEFIHLND KQRRRFGALILLFDEAEEELEGELRFNARHG >gi|289775900|gb|GG745510.1| GENE 718 746662 - 748629 1834 655 aa, chain - ## HITS:1 COG:yhcP KEGG:ns NR:ns ## COG: yhcP COG1289 # Protein_GI_number: 16131130 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 655 1 655 655 1071 81.0 0 MGTYTIAPRHLRFAIKLACAVVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYS GAIRYRGMLRIAGTFIGCIAALIIIILMIRAPLLMMLVCCLWAGFCTWISSLVKVENSYA WGLAGYTALIIIITIHTNPMLAPQFAVERCSEIVIGIVSAIVADLLFSPRSIKKEIDLEL DNLLIAQYKLMQLCVAHGEKEEVDQAWGALVRRTTALEGMRSNLIMESSRWAKANQRLKA INTLSLTLITQACETYLIQNSRPEMVTDDYRELFAEPVETVQDVHQQLKRMRRFLTWKGE HNTPVTIYSWVGAATRYLLLKRGVVGNTKISRIEDSVLRGEAVVKVESAERHHAMVNFWR TSVSCILGTLFWLWTGWTSGSGAMVMIAVVTALAMRLPNPRMVAMDFLYGTLAALPLGTL YFLVIMPATQQSMLLLCISLAAMAFFIGIEVQKRRLGSLGALASTINILVLDNPMQFQFS QFLDSALGQIVGCFLALMVILIVRDNSRARTGRVLLNQFVSAAVSSLTTNSARRKENHLP ALYQQLFLLLNKFPGDVARFRLALTLIIAHQRLRDAPVPVNDDLSAFHRQLRRTADHVIS AGSDDKRRRYFTQLLAELDVYQEKLRVWEASPQVTEPVRRLVEMLHKYQHVLTSS >gi|289775900|gb|GG745510.1| GENE 719 748635 - 749567 871 310 aa, chain - ## HITS:1 COG:STM3365 KEGG:ns NR:ns ## COG: STM3365 COG1566 # Protein_GI_number: 16766660 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 310 1 310 310 508 85.0 1e-144 MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQ VNVKDNQLVKKDQVLFVIDQPRYQKALAEAEADVAYYQTLAQEKRVEAGRRNKLGIQAMS REEIDQANNVLQTVEHQLAKAVASRDLARLDLERTEIRAPADGWVTNLNVYTGEFITRGS TAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS DSKGMASVDSNLEWVRLAQRVPVRIRLDQQQGNLWPSGTTATVVITGKEDRDTSRANFFQ KLAMRLREFG >gi|289775900|gb|GG745510.1| GENE 720 749575 - 749778 65 67 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0448 NR:ns ## KEGG: Kvar_0448 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 67 1 67 67 83 100.0 3e-15 MSLFPVIVIFGLSFPPIFFELLLSLAIFWLVHRLLVPTGIYDFVWHPALFNTALYCCLFY LISRLFV >gi|289775900|gb|GG745510.1| GENE 721 749910 - 750839 997 309 aa, chain + ## HITS:1 COG:STM3367 KEGG:ns NR:ns ## COG: STM3367 COG0583 # Protein_GI_number: 16766662 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 306 1 306 309 571 90.0 1e-163 MERLKRMSVFAKVVELGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLNRSTRSLGLTE AGKIYYQGCRRMLFEAQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLARITAEMLKEYPG LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGSMPMVLCAAKSYLAQAGNPEK PADLASHSWLEYSVRPDNEFEIIAPEGISTRLIPQGRFVTNDPMTLIRWLTAGVGIAYVP LMWAIEEINRGELEILLPSYQSDPRPVYALYTEKDKLPLKVQVCINYLTEYFVDVAKIYQ GMHGRGIAR >gi|289775900|gb|GG745510.1| GENE 722 750875 - 752320 1893 481 aa, chain - ## HITS:1 COG:tldD KEGG:ns NR:ns ## COG: tldD COG0312 # Protein_GI_number: 16131134 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli K12 # 1 481 1 481 481 833 92.0 0 MSLNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSY NIDQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQTLGAVEYSPLY TSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADVR PLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLSA VAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDDG TIVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPM PRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVTK AVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGGT A >gi|289775900|gb|GG745510.1| GENE 723 752409 - 756206 3785 1265 aa, chain - ## HITS:1 COG:STM3369 KEGG:ns NR:ns ## COG: STM3369 COG3164 # Protein_GI_number: 16766664 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 1265 1 1266 1266 1911 73.0 0 MRRLPGILLLTVATLIVIVALLVSGLRLVLPQLDAWRPQLLEKISTLTGTPVDASQITAS WQNFGPTLDVRDIQVGLKDGGKMAVKRVTLALDVWQSLLHMRWQFRDLTFWQLQVHTNTP IQTNDGGESLKTDRISDLFLRQFDHFTLRDSHLSFLTISGQRAELAVPQLTWLNGRNRHR AEGQLSLSSLTGQHGVMQVRMDLRDEDGLLNKGRVWLQADDIDVKPWLGRWMQDNIALKS ARFSLEGWMTIEKGDVASGDVWLKKGGASWQGDDEVHHLSVDNLTAHLSHDKQSWGFYIP DTRIAIDDKPWPSGALAMAWIPAQDVGGDDHQRSDELRIRASNLTLSGLSGLQPFADKLA PSLGELWRTTQPSGKINLLALDIPLQATEKTRFQAQWSDLAWKQWKLLPGAEHFSGSLNG SVEHGELRARMTQALMPYTGVFRAPLEIAAGEATLSWVKNDKGFMLDGRDIDVQATGVRA RGGFRYLQPQGDDPWLGILAGISTNDGGQAWRYFPENLMGKALVDYLSGAIKAGQARDAT LVYGGNPHLFPYPHNEGQFQVYVPLKNATFAFQPDWPALTGLNIDLNFINNGLWMRADKA MLGNVTASNLDAAIPDYTAEKLLIDADIKGPGKEVGPYFNTTPLKETLGAALDSLQLDGD VSARLHLNIPLDGEMTTAKGDVRLQNNSLFIKPLDTTLQNLSGNFSFVNGDLNSETLSAT WFHQPLNLNFSTREGEKAFLVDVGMNANWQPSHTGLLPKAVNESLSGSVPWEGKVAIELP YHGNASYKVDINGDLKNVSSHLPSPVNKPAGEPMPIKINVAGGLSSFDLTGSVGAKNHIN SRWLLNHKLTLDRAILTSDSKGLSPLPDQPGVELNLPPMDGAQWLALFQNGAANEVSSTI LFPQRIVLRTPSLALAGQQWNNVSLMSQPVAGGSQVEAQGREINATLTMRDNAPWLANVR YLYFNPTSANGQTGEKNAAPQAETRLDFHGWPDLQLRCAECWLWGQKYGRIDGDVAIKGD TLTLSNGLVDTGFGRLTTDGVWVSAPAGVRTSLKGKLHGNKTDEFASFFGVSTPVKDSPF DIDYDLHWRAPPWSPDVASLNGIIKSHLGKGQFTDLSTGHAGQLLRLLSVDALLRKLRFD FSDTFSEGFYFDSINSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRRLDLQAVVAP EISATVGVAAAFAVNPIVGAAVFAASKVLGPLWNKVSILRYRITGPIDQPQINEVLRQAR SNKKQ >gi|289775900|gb|GG745510.1| GENE 724 756244 - 757713 1648 489 aa, chain - ## HITS:1 COG:ZcafA KEGG:ns NR:ns ## COG: ZcafA COG1530 # Protein_GI_number: 15803780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 EDL933 # 1 489 7 495 495 894 96.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVADYCDEQGGFIIRTAAEGVHEQ EMAADAAYLKRVWTKVMERKKRNQTRYQLYGELALAQRVLRDFADAHLDRIRVDSRLTYE ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM TTIDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKSVETV CYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|289775900|gb|GG745510.1| GENE 725 757716 - 758297 475 193 aa, chain - ## HITS:1 COG:yhdE KEGG:ns NR:ns ## COG: yhdE COG0424 # Protein_GI_number: 16131136 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 192 1 192 197 319 85.0 2e-87 MTTLYLASGSPRRQELLTQLGLTFERLVPGIEEQRQPQESAEHYVVRLAREKAQAGVAMA SRDLPVLGADTIVILNGEVLEKPRDAEHAAAMLRLLSGQTHQVMTAVALADTQQTLDCLV VTDVTFRLLSEQDIAEYVASGEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE LLSNFNSLRKEKG >gi|289775900|gb|GG745510.1| GENE 726 758305 - 758793 576 162 aa, chain - ## HITS:1 COG:STM3372 KEGG:ns NR:ns ## COG: STM3372 COG2891 # Protein_GI_number: 16766667 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Salmonella typhimurium LT2 # 1 162 2 163 163 230 96.0 7e-61 MASYRSQGRWVIWLSFLIALLLQIMPWPADISVFRPNWVLLILLYWILALPHRVNVGTGF VMGAILDLISGSTLGVRALSLSIIAYLVALKYQLFRNLALWQQALVVMLLSLAVDIIVFW AEFLVINVSFRPEVFWSSVVNGVLWPWLFLLMRKVRQQFAVQ >gi|289775900|gb|GG745510.1| GENE 727 758793 - 759785 1217 330 aa, chain - ## HITS:1 COG:ECs4122 KEGG:ns NR:ns ## COG: ECs4122 COG1792 # Protein_GI_number: 15833376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 329 1 329 367 533 93.0 1e-151 MKPIFSRGPSLQIRLILAVLVALGVIIADSRLGTFSQIRTYMDTAVSPFYFVSNGPRELL DSVSQTLATRDQLELENRALRQELLLKNSDLLMLGQYKQENARLRELLGSPLRQDEQKMV TQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKMTSRVLLICDATHA LPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVGVVSS VKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEEVHRVANERLMQMMPQV LPAPDAMGPQMPAPATGLTPSQPSLPAGGQ >gi|289775900|gb|GG745510.1| GENE 728 759856 - 760878 1209 340 aa, chain - ## HITS:1 COG:ECs4123 KEGG:ns NR:ns ## COG: ECs4123 COG1077 # Protein_GI_number: 15833377 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Escherichia coli O157:H7 # 1 340 28 367 367 632 99.0 0 MFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHEAKQMLGRTP GNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIR ESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSV RIGGDRFDEAVINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPR GFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLL MEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|289775900|gb|GG745510.1| GENE 729 761205 - 763145 1718 646 aa, chain - ## HITS:1 COG:ECs4124_3 KEGG:ns NR:ns ## COG: ECs4124_3 COG2200 # Protein_GI_number: 15833378 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 395 646 1 252 252 426 82.0 1e-119 MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDQ LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRTDSYRPLGSHEQFREITVPSLKHPGITLH LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQST AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV >gi|289775900|gb|GG745510.1| GENE 730 763645 - 764646 1121 333 aa, chain + ## HITS:1 COG:ECs2709 KEGG:ns NR:ns ## COG: ECs2709 COG2041 # Protein_GI_number: 15831963 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Escherichia coli O157:H7 # 2 333 3 334 334 601 87.0 1e-172 MKRKKLTEADVTAESVFMLKRRQVLKMLGISATALSLPAAAQADLLDWFKGNDRPPAPAG KALDFAKPAEWQANLTLTPEDKVAGYNNFYEFGLDKADPAANAGSLRTDPWTLTIGGEVA KPLTLDHDDLTKRFPLEERIYRMRCVEAWSMVVPWVGFPLHKLLALVEPTSNARYVAFKT LYAPDQMPGQKDRFIGGGLAYPYVEGLRLDEAMHPLTLLTVGVYGKALPPQNGAPIRLTV PWKYGFKGIKSIVSIELTREQPPTTWNLAAPDEYGFFANVNPHVDHPRWSQASERFIGSG GVLDVKRQPTLLFNGYADEVASLYRGMNLRENF >gi|289775900|gb|GG745510.1| GENE 731 764646 - 765245 527 199 aa, chain + ## HITS:1 COG:STM3378 KEGG:ns NR:ns ## COG: STM3378 COG2717 # Protein_GI_number: 16766673 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 199 1 199 199 268 80.0 7e-72 MRFTVKQIAWLKVFLHLAGFLPLVWLFWAGHQGYFSADPAKDIQHFTGRMALKFLLATLL VAPLARYAKQPLLIRIRRLLGLWCFAWATLHLTSYTLLELGINNLALLGSEIIKRPYLTL GMICWVILLAMAATSTQAMQRKLGRRWQLLHNFVYLVAILAPIHYLWSVKIVSPQPIIYA LLAVVLLACRYKKFRQWWR >gi|289775900|gb|GG745510.1| GENE 732 765478 - 765930 344 150 aa, chain + ## HITS:1 COG:YPO3660 KEGG:ns NR:ns ## COG: YPO3660 COG0757 # Protein_GI_number: 16123803 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Yersinia pestis # 1 150 1 150 150 200 75.0 9e-52 MADKFHILLLNGPNINMLGTREPDKYGTLSLAEIVNRLTSEAAALNVSLDHLQSNAEYAL IDRIHQAKDNVDYILINPAAFAHTSVAIRDALLAVNIPFIEIHLSNVHAREPFRQHSYLS DVAAGVICGLGADGYSYALQTAVKRLSQSH >gi|289775900|gb|GG745510.1| GENE 733 765953 - 766420 471 155 aa, chain + ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 155 1 156 156 210 87.0 9e-55 MDIRKIKKLIELVEESGISELEISEGEESVRISRSAPVASYPVMQQAYAAPMMQPQAPAA AAAAPAAAAEAPAKAEISGHIVRSPMVGTFYRTPSPDAKAFVEVGQKVNVGDTLCIVEAM KMMNQIEADKAGVVKAILIESGQPVEFDEPLVVIE >gi|289775900|gb|GG745510.1| GENE 734 766431 - 767780 1455 449 aa, chain + ## HITS:1 COG:STM3380 KEGG:ns NR:ns ## COG: STM3380 COG0439 # Protein_GI_number: 16766675 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Salmonella typhimurium LT2 # 1 449 1 449 449 867 97.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAIAIHPGYGFLSENANFAEQVERSGFIFIGPKADTIRLMGDKVSAI TAMKKAGVPTVPGSDGPLTDDMDANRAHAKRIGYPVIIKASGGGGGRGMRVVRSDAELAQ SISMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQDEVVVRGHAVECRINAEDPNTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGESRDVAIARMKNALQELIIDGIKTNVDL QMRIMSDENFQHGGTNIHYLEKKLGLQEK >gi|289775900|gb|GG745510.1| GENE 735 767891 - 768133 433 80 aa, chain + ## HITS:1 COG:STM3381 KEGG:ns NR:ns ## COG: STM3381 COG3924 # Protein_GI_number: 16766676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 80 1 80 80 124 86.0 6e-29 MDKRFVQAHKEARWALWLTLLYLAAWLAAAYLPGVSIGFTGLPHWFEMACLLVPLLFILL CWAMVRFIFRDISLEDNDAA >gi|289775900|gb|GG745510.1| GENE 736 768123 - 769574 1613 483 aa, chain + ## HITS:1 COG:ECs4130 KEGG:ns NR:ns ## COG: ECs4130 COG4145 # Protein_GI_number: 15833384 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Escherichia coli O157:H7 # 1 483 3 485 485 708 85.0 0 MQLEIIVVLIAYLFVVFGLSIYAMRKRSTGNFLSEYFLGSRSMGGFVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQVPTIWLSLGILGKKFAILARRYNAITLNDMLQARYQS RAVVWIASVSLLVAFVGAIAVQFIGGARLLETAAGIKYETGLLIFGITIALYTAFGGFRA SVLNDTMQGMVMLIGTIVLLVGVVHAAGGLHQAVDTLQRIDPQLVSPHGADDILSPTFMT SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIVIGTIVVAILMFGMHLAGALGRAVLPG LTVPDLVIPTLMVQVLPPWAAGLFLAAPMAAIMSNVNAHLLQASATIIKDLWLSAQPTKK RNEQKLKRISTIATLVLGILMMLAAWRPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAAGALSAMLVGGVLYAVLATFHIQFLGFHPIVPSLLLSLLAFVVGNRFGHPVPPAPVMT TDK >gi|289775900|gb|GG745510.1| GENE 737 769586 - 770467 1544 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206577246|ref|YP_002236326.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae 342] # 1 293 1 293 293 599 100 1e-170 MPWIQLKLNTTGANAEDLSDALMEAGSVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF DAETDMKAVVAQLEQHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD VPDENAVNVMLDPGLAFGTGTHPTTAMCLQWLDGLDLQGKTVIDFGCGSGILAIAALKLG AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPEAMKADVVVANILAGPLRELA PLISVLPVTGGLLGLSGILASQAESVCEAYAPLFTLDPVVEKEEWCRITGRKN >gi|289775900|gb|GG745510.1| GENE 738 770825 - 771790 1087 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 317 28 344 353 423 64 1e-117 MRIGHHQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH IDEPGIRTVQIAGSVPEEMAAAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPEQ VKSILTAVVNAVDVPVTLKIRTGWEPEHRNCVEIAQLAEECGIQALTIHGRTRACLFNGD AEYDSIRAVKQKVSIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGELLPPLPLAEVKRLLCAHVRELHDFYGQAKGYRIARKHVSWYLQEHAPDDQFRRTF NAIEDASEQLEALEAYFENFA >gi|289775900|gb|GG745510.1| GENE 739 771815 - 772111 387 98 aa, chain + ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 100.0 1e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|289775900|gb|GG745510.1| GENE 740 772196 - 772849 451 217 aa, chain - ## HITS:1 COG:STM3389 KEGG:ns NR:ns ## COG: STM3389 COG1309 # Protein_GI_number: 16766684 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 201 1 201 220 255 59.0 4e-68 MARKTKEEALRTRQLLIESAIQQFALRGVTNTTLTDIADAAGVTRGAVYWHFASKTELFN EMWQQQPPLRDLIQQNLATRNEQEPLKDLRQRFIAGLRYIAENPRQRALMQILYQRCEFA SDMLSESEIRQRIGFNYSVIGGILQRCVRNNILPAETNIDVILIVLHSAFSGLIKNWLLE PQRFDLYQQAPALVDNIMAVVCAARLSQEPVLRVVNQ >gi|289775900|gb|GG745510.1| GENE 741 773228 - 774367 1223 379 aa, chain + ## HITS:1 COG:STM3390 KEGG:ns NR:ns ## COG: STM3390 COG0845 # Protein_GI_number: 16766685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 1 379 1 382 385 512 79.0 1e-145 MTTHARVTLLSGLIISALLLTGCDNSGNPQPHAQAPQVTVHVVNSAPLSVTTELPGRTSA FRVAEVRPQVSGIILKRNFVEGSDVEAGQSLYQIDPATYQAAWNSAKGDEAKAEAAAAIA HLTVKRYVPLLGTKYISQQEYDQAVATARQADADVIATKAAVDTARINLAYTKVTSPISG RIGKSSVTEGALVTNGQSDALATVQQLDPIYVDVTESSNDFMRLKQESLQRGGDTKSVEL VMENGQAYPLKGSLQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGVDPQAI LVPQQGVTRTPRGDASVMLVNDKNQVETREVVATQAVGDKWLITSGLKPGDKVIVSGLQK VRPGVTVKAEAERAAPAAQ >gi|289775900|gb|GG745510.1| GENE 742 774380 - 777490 3047 1036 aa, chain + ## HITS:1 COG:STM3391 KEGG:ns NR:ns ## COG: STM3391 COG0841 # Protein_GI_number: 16766686 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1034 1 1035 1037 1839 91.0 0 MSKFFIHRPVFAWVLAIIMMIAGGLAILQLPIAQYPTIAPPAVAISATYPGADAQTVQDT VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFKSGTDPDIAQVQVQNKLQLATPLLPQ EVQQQGISVEKSSSSFLLVAGFISDNPATTQDDISDYVASNVKDPISRLNGVGDVQLFGA QYAMRVWLDGNLLNKYNLTPVDVINALKVQNDQIAAGQLGGTPALKGQQLNASIIAQTRL KDPQEFGKVTLRVNADGSVVHLKDVARIELGGENYNVVARINGKPASGLGIKLATGANAL DTATAIKAKLAELQPYFPQGMKVVYPYDTTPFVKISIHEVVKTLFEAIILVFLVMYLFLQ NMRATLIPTIAVPVVLLGTFAVLSMFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM VEEKLSPKEATEKSMSQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALVLTPALCATLLKPASAEHHEKKGFFGWFNARFDQSVNHYTNSVSGILRGTGRYL VIYLVIVVGMAVLFMRLPTSFLPDEDQGVFLTMIQLPSGATQERTQKVLDTVTDYYLHNE KANVESVFTVNGFSFSGQGQNSGMAFVSLKPWEARSGDENNVESIIKRATVAFSQIKDAM VFPFNMPAIIELGTATGFDFELIDQGGLGHTALTQARNQLLGMVKQHPDQLVRVRPNGLE DTPQFKLDVDQEKAQALGVSLSDINETISAALGGYYVNDFIDRGRVKKVYVQADAHFRML PSDINNMYVRSANGEMVPFSAFVTSRWIYGSPRLERYNGLPSMEILGEASPGKSTGEAMA LMEQLASKLPSGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVM LVVPLGVIGALLAATLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGIIE ATLEASRMRLRPILMTSLAFILGVMPLVISHGAGSGAQNAVGTGVMGGMLTATLLAIFFV PVFFVVVRRRFTRHAE >gi|289775900|gb|GG745510.1| GENE 743 777788 - 778009 254 73 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0425 NR:ns ## KEGG: Kvar_0425 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 73 1 73 73 112 98.0 4e-24 MKKYLIVALLASLLAGCAHDSPCVPVYDSQGRLVHTNTCMKGTTEDNWDTAGAIAGGAAA VAGLTLGIVALTR >gi|289775900|gb|GG745510.1| GENE 744 778114 - 778614 -521 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|91074357|gb|ABE09238.1| ## NR: gi|91074357|gb|ABE09238.1| hypothetical protein UTI89_C3805 [Escherichia coli UTI89] # 100 158 14 72 81 90 83.0 4e-17 MTAAFPGSGAAHLFRATGRAGRVRIRSPGKRSATGGAGGASGRKKQKSPVFRLSLSFYLM PGNDGGRPARYPPAVAAQRSNPLPADLSCSGERSSANNRYNKSKRPSLSTGPFALFDAWR FPTLTWGDPTLPSALRRFTSEFGMGSGGTAALLSPGKFFTTCRTLT Prediction of potential genes in microbial genomes Time: Mon Jul 11 05:53:25 2011 Seq name: gi|289775432|gb|GG745511.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.4, whole genome shotgun sequence Length of sequence - 496366 bp Number of predicted genes - 466, with homology - 465 Number of transcription units - 244, operones - 102 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.202 + CDS 128 - 829 466 ## COG2186 Transcriptional regulators 2 1 Op 2 . + CDS 842 - 2239 1374 ## COG0477 Permeases of the major facilitator superfamily - Term 1990 - 2028 3.1 3 2 Op 1 13/0.020 - CDS 2236 - 3219 919 ## COG1609 Transcriptional regulators 4 2 Op 2 8/0.040 - CDS 3232 - 4161 1100 ## COG0524 Sugar kinases, ribokinase family 5 3 Op 1 16/0.000 - CDS 4265 - 5155 1142 ## COG1879 ABC-type sugar transport system, periplasmic component 6 3 Op 2 21/0.000 - CDS 5183 - 6148 1366 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 7 3 Op 3 9/0.040 - CDS 6154 - 7659 175 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 8 3 Op 4 4/0.303 - CDS 7670 - 8089 365 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 8127 - 8186 6.1 - Term 8226 - 8270 7.4 9 4 Tu 1 . - CDS 8274 - 10142 2380 ## COG3158 K+ transporter - Prom 10221 - 10280 7.4 + Prom 10267 - 10326 4.2 10 5 Op 1 7/0.061 + CDS 10360 - 11859 1551 ## COG0714 MoxR-like ATPases 11 5 Op 2 . + CDS 11856 - 13304 1650 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 12 6 Tu 1 . - CDS 13309 - 14301 1075 ## COG2502 Asparagine synthetase A - Prom 14408 - 14467 3.7 + Prom 14368 - 14427 8.1 13 7 Op 1 4/0.303 + CDS 14453 - 14911 667 ## COG1522 Transcriptional regulators + Prom 14920 - 14979 1.6 14 7 Op 2 5/0.202 + CDS 15010 - 15450 423 ## COG0716 Flavodoxins + Prom 15678 - 15737 3.4 15 8 Op 1 24/0.000 + CDS 15832 - 17721 2108 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 17786 - 17826 -0.8 + Prom 17728 - 17787 2.6 16 8 Op 2 3/0.424 + CDS 17838 - 18461 881 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 18711 - 18750 -0.3 + Prom 18935 - 18994 6.0 17 9 Op 1 8/0.040 + CDS 19078 - 19458 315 ## COG3312 F0F1-type ATP synthase, subunit I 18 9 Op 2 40/0.000 + CDS 19467 - 20282 990 ## COG0356 F0F1-type ATP synthase, subunit a 19 9 Op 3 37/0.000 + CDS 20331 - 20570 323 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 20 9 Op 4 38/0.000 + CDS 20621 - 21091 508 ## COG0711 F0F1-type ATP synthase, subunit b 21 9 Op 5 41/0.000 + CDS 21106 - 21639 608 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 22 9 Op 6 42/0.000 + CDS 21652 - 23193 1482 ## COG0056 F0F1-type ATP synthase, alpha subunit 23 9 Op 7 42/0.000 + CDS 23244 - 24107 1043 ## COG0224 F0F1-type ATP synthase, gamma subunit 24 9 Op 8 42/0.000 + CDS 24134 - 25516 1389 ## COG0055 F0F1-type ATP synthase, beta subunit 25 9 Op 9 6/0.121 + CDS 25543 - 25956 468 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 25977 - 26013 7.1 + Prom 26482 - 26541 6.0 26 10 Op 1 9/0.040 + CDS 26651 - 28021 1586 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 27 10 Op 2 2/0.576 + CDS 28205 - 30034 2650 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 30049 - 30088 7.6 + Prom 30232 - 30291 6.1 28 11 Op 1 39/0.000 + CDS 30372 - 31412 1157 ## COG0226 ABC-type phosphate transport system, periplasmic component + Term 31479 - 31516 -0.9 29 11 Op 2 38/0.000 + CDS 31541 - 32500 1482 ## COG0573 ABC-type phosphate transport system, permease component 30 11 Op 3 41/0.000 + CDS 32500 - 33390 1351 ## COG0581 ABC-type phosphate transport system, permease component 31 11 Op 4 32/0.000 + CDS 33438 - 34211 200 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 32 11 Op 5 . + CDS 34262 - 34987 1052 ## COG0704 Phosphate uptake regulator + Term 34997 - 35047 12.1 + Prom 35310 - 35369 5.1 33 12 Op 1 . + CDS 35473 - 37104 1720 ## COG4580 Maltoporin (phage lambda and maltose receptor) 34 12 Op 2 . + CDS 37143 - 38309 1590 ## COG2382 Enterochelin esterase and related enzymes + Term 38317 - 38345 1.3 35 13 Tu 1 . + CDS 38360 - 39079 713 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 36 14 Tu 1 . - CDS 39159 - 39824 787 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 39890 - 39949 4.4 37 15 Tu 1 . + CDS 39995 - 41332 1912 ## COG2252 Permeases + Term 41347 - 41389 7.6 - Term 41340 - 41372 5.0 38 16 Op 1 3/0.424 - CDS 41378 - 41944 735 ## COG0431 Predicted flavoprotein 39 16 Op 2 4/0.303 - CDS 41981 - 42703 442 ## COG2091 Phosphopantetheinyl transferase - Prom 42740 - 42799 3.9 - Term 42771 - 42801 -0.5 40 17 Op 1 9/0.040 - CDS 42860 - 43819 1210 ## COG0583 Transcriptional regulator 41 17 Op 2 6/0.121 - CDS 43794 - 44972 1279 ## COG0477 Permeases of the major facilitator superfamily - Prom 44993 - 45052 1.5 42 17 Op 3 . - CDS 45072 - 45491 575 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 45516 - 45575 3.0 - Term 45547 - 45585 10.2 43 18 Tu 1 . - CDS 45611 - 46975 1796 ## COG0486 Predicted GTPase - Prom 47027 - 47086 1.9 - Term 46988 - 47023 5.8 44 19 Op 1 22/0.000 - CDS 47098 - 48744 1883 ## COG0706 Preprotein translocase subunit YidC - Prom 48808 - 48867 4.4 45 19 Op 2 . - CDS 48968 - 49294 137 ## COG0594 RNase P protein component 46 19 Op 3 . - CDS 49343 - 49483 228 ## PROTEIN SUPPORTED gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 - Prom 49578 - 49637 6.9 + Prom 50003 - 50062 2.1 47 20 Op 1 16/0.000 + CDS 50174 - 51508 1567 ## COG0593 ATPase involved in DNA replication initiation 48 20 Op 2 18/0.000 + CDS 51513 - 52613 1235 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 49 20 Op 3 9/0.040 + CDS 52760 - 53833 904 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 50 20 Op 4 1/0.727 + CDS 53862 - 56282 3660 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 56332 - 56368 7.0 + Prom 56323 - 56382 3.4 51 21 Tu 1 . + CDS 56483 - 57295 1172 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 57303 - 57341 4.0 + Prom 57341 - 57400 2.4 52 22 Op 1 . + CDS 57445 - 58527 1169 ## Kvar_0010 hypothetical protein 53 22 Op 2 . + CDS 58524 - 59657 1306 ## KPK_0007 outer membrane protein, OMP85 family 54 22 Op 3 . + CDS 59735 - 60961 1044 ## Kvar_0012 hypothetical protein + Term 60978 - 61028 2.2 55 23 Tu 1 . - CDS 60963 - 61295 310 ## COG5645 Predicted periplasmic lipoprotein - Prom 61419 - 61478 3.7 56 24 Tu 1 4/0.303 + CDS 61609 - 62022 728 ## COG0071 Molecular chaperone (small heat shock protein) + Term 62084 - 62118 3.0 57 25 Tu 1 1/0.727 + CDS 62139 - 62567 835 ## COG0071 Molecular chaperone (small heat shock protein) + Term 62588 - 62616 1.3 + Prom 62581 - 62640 2.1 58 26 Tu 1 . + CDS 62713 - 64374 2240 ## COG2985 Predicted permease + Term 64528 - 64575 3.6 - Term 64246 - 64280 2.1 59 27 Tu 1 . - CDS 64342 - 65088 975 ## COG2188 Transcriptional regulators - Prom 65137 - 65196 5.2 + Prom 65097 - 65156 2.8 60 28 Op 1 2/0.576 + CDS 65387 - 67009 2142 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 61 28 Op 2 . + CDS 67006 - 68328 1799 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 68343 - 68375 7.7 62 29 Op 1 . + CDS 68429 - 68776 560 ## COG2149 Predicted membrane protein 63 29 Op 2 . + CDS 68766 - 69128 254 ## KPK_0017 hypothetical protein 64 29 Op 3 . + CDS 69125 - 69625 485 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 69496 - 69522 -0.7 65 30 Op 1 4/0.303 - CDS 69629 - 70957 1640 ## COG3048 D-serine dehydratase 66 30 Op 2 . - CDS 70974 - 72311 1869 ## COG2610 H+/gluconate symporter and related permeases - Prom 72489 - 72548 1.9 + Prom 72453 - 72512 9.5 67 31 Tu 1 . + CDS 72536 - 73459 1046 ## COG0583 Transcriptional regulator + Term 73463 - 73493 -0.6 - Term 73358 - 73395 0.0 68 32 Tu 1 8/0.040 - CDS 73587 - 74738 1872 ## COG0477 Permeases of the major facilitator superfamily - Prom 74835 - 74894 3.8 - Term 74907 - 74943 2.3 69 33 Op 1 . - CDS 74947 - 75780 1204 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 75794 - 75843 0.4 70 33 Op 2 . - CDS 75849 - 76295 444 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 71 33 Op 3 . - CDS 76386 - 76475 89 ## + Prom 77259 - 77318 2.6 72 34 Op 1 32/0.000 + CDS 77338 - 79026 2121 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 73 34 Op 2 1/0.727 + CDS 79030 - 79317 403 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Prom 79340 - 79399 3.0 74 35 Op 1 5/0.202 + CDS 79470 - 80063 802 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 75 35 Op 2 5/0.202 + CDS 80081 - 81565 1837 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 76 35 Op 3 3/0.424 + CDS 81577 - 82905 2022 ## COG2271 Sugar phosphate permease + Term 82978 - 83009 -1.0 + Prom 82954 - 83013 3.8 77 36 Tu 1 . + CDS 83051 - 84442 2406 ## COG2271 Sugar phosphate permease + Term 84466 - 84497 3.1 + Prom 84486 - 84545 3.8 78 37 Tu 1 . + CDS 84579 - 85031 617 ## KP1_5442 hypothetical protein 79 38 Op 1 8/0.040 - CDS 85161 - 85484 184 ## COG2944 Predicted transcriptional regulator 80 38 Op 2 . - CDS 85468 - 85827 360 ## COG4737 Uncharacterized protein conserved in bacteria - Prom 85860 - 85919 4.6 + Prom 85819 - 85878 6.2 81 39 Tu 1 . + CDS 86039 - 87232 1586 ## COG2814 Arabinose efflux permease 82 40 Tu 1 . - CDS 88872 - 89084 328 ## Kvar_0042 porin LamB type - Prom 89111 - 89170 5.9 - Term 89114 - 89164 4.2 83 41 Op 1 13/0.020 - CDS 89229 - 89531 385 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Prom 89552 - 89611 2.5 84 41 Op 2 10/0.030 - CDS 89629 - 90951 1903 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 85 41 Op 3 . - CDS 90963 - 91277 435 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 91340 - 91399 2.3 + Prom 91445 - 91504 4.3 86 42 Tu 1 . + CDS 91571 - 92512 1037 ## COG1609 Transcriptional regulators + Term 92529 - 92565 4.0 + Prom 92541 - 92600 3.3 87 43 Op 1 . + CDS 92724 - 94094 1416 ## COG0477 Permeases of the major facilitator superfamily 88 43 Op 2 . + CDS 94108 - 95370 1355 ## Kvar_0048 extradiol ring-cleavage dioxygenase class III protein subunit B 89 44 Tu 1 . - CDS 95367 - 96557 1376 ## COG0583 Transcriptional regulator - Prom 96634 - 96693 4.8 + Prom 96598 - 96657 4.8 90 45 Op 1 2/0.576 + CDS 96721 - 97461 981 ## COG2120 Uncharacterized proteins, LmbE homologs 91 45 Op 2 . + CDS 97458 - 98171 698 ## COG0684 Demethylmenaquinone methyltransferase 92 45 Op 3 . + CDS 98172 - 99257 932 ## COG2828 Uncharacterized protein conserved in bacteria 93 45 Op 4 . + CDS 99260 - 100123 927 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 94 46 Tu 1 . - CDS 100127 - 100417 336 ## KP1_5414 putative secreted protein - Prom 100442 - 100501 2.9 95 47 Tu 1 . - CDS 100524 - 101426 1362 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 101451 - 101510 2.9 96 48 Op 1 9/0.040 - CDS 101578 - 103008 2176 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 97 48 Op 2 . - CDS 103033 - 103935 1314 ## COG2103 Predicted sugar phosphate isomerase - Prom 103957 - 104016 7.0 - Term 104044 - 104089 6.7 98 49 Op 1 3/0.424 - CDS 104098 - 105261 1661 ## COG0477 Permeases of the major facilitator superfamily - Term 105267 - 105298 5.5 99 49 Op 2 9/0.040 - CDS 105307 - 106671 465 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 100 49 Op 3 27/0.000 - CDS 106675 - 109782 4562 ## COG0841 Cation/multidrug efflux pump 101 49 Op 4 . - CDS 109782 - 110906 1309 ## COG0845 Membrane-fusion protein - Prom 111128 - 111187 6.9 + Prom 111156 - 111215 3.8 102 50 Tu 1 . + CDS 111286 - 111702 669 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 112160 - 112205 4.1 103 51 Tu 1 . - CDS 112230 - 112877 873 ## COG1309 Transcriptional regulator - Prom 112909 - 112968 5.4 + Prom 112869 - 112928 3.0 104 52 Tu 1 . + CDS 112958 - 114436 2196 ## COG0477 Permeases of the major facilitator superfamily 105 53 Tu 1 . - CDS 114433 - 115347 1156 ## COG0583 Transcriptional regulator - Prom 115396 - 115455 2.3 + Prom 115349 - 115408 2.1 106 54 Op 1 1/0.727 + CDS 115443 - 116072 807 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 107 54 Op 2 . + CDS 116072 - 116542 859 ## PROTEIN SUPPORTED gi|152972537|ref|YP_001337683.1| 50S ribosomal protein L21 108 55 Tu 1 . - CDS 116562 - 117098 964 ## COG2128 Uncharacterized conserved protein 109 56 Tu 1 . + CDS 117215 - 118120 1215 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 118148 - 118207 2.4 110 57 Op 1 . + CDS 118248 - 119057 1209 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 111 57 Op 2 . + CDS 119082 - 119936 1263 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 112 58 Tu 1 . - CDS 119926 - 120486 898 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 120511 - 120570 1.6 + Prom 120455 - 120514 3.1 113 59 Op 1 2/0.576 + CDS 120654 - 121433 985 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 114 59 Op 2 . + CDS 121455 - 122408 1184 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 115 60 Tu 1 . - CDS 122405 - 123454 1306 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 123673 - 123732 5.8 + Prom 123933 - 123992 1.6 116 61 Tu 1 . + CDS 124060 - 124524 353 ## Kvar_0078 Crp/Fnr family transcriptional regulator 117 62 Op 1 1/0.727 - CDS 124576 - 124866 510 ## COG1359 Uncharacterized conserved protein 118 62 Op 2 . - CDS 124868 - 125875 1310 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Term 125899 - 125934 -1.0 119 63 Tu 1 . - CDS 125988 - 126455 668 ## KPK_0075 hypothetical protein - Prom 126494 - 126553 1.7 - TRNA 126627 - 126717 72.4 # SeC(p) TCA 0 0 + Prom 126809 - 126868 5.8 120 64 Op 1 3/0.424 + CDS 127010 - 128404 508 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 121 64 Op 2 . + CDS 128417 - 130735 3078 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 130760 - 130793 1.0 + Prom 130773 - 130832 5.3 122 65 Tu 1 . + CDS 130894 - 131616 910 ## COG1737 Transcriptional regulators + Term 131666 - 131707 3.9 123 66 Op 1 2/0.576 - CDS 132240 - 133619 1742 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 124 66 Op 2 . - CDS 133632 - 135191 1780 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 135248 - 135307 3.6 125 67 Tu 1 . - CDS 135442 - 137139 2023 ## KPK_0082 AsmA family protein 126 68 Tu 1 . - CDS 137280 - 138671 1789 ## COG2233 Xanthine/uracil permeases - Prom 138811 - 138870 4.0 + Prom 138742 - 138801 6.1 127 69 Tu 1 . + CDS 138956 - 140158 1841 ## COG0786 Na+/glutamate symporter - Term 140154 - 140195 -0.1 128 70 Op 1 18/0.000 - CDS 140273 - 141784 2260 ## COG0554 Glycerol kinase 129 70 Op 2 . - CDS 141806 - 142657 940 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 142759 - 142818 4.6 130 71 Tu 1 . + CDS 143106 - 143345 541 ## COG3074 Uncharacterized protein conserved in bacteria + Term 143355 - 143391 7.4 + Prom 143380 - 143439 6.2 131 72 Tu 1 . + CDS 143497 - 144486 1546 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 144516 - 144545 -0.4 + Prom 144739 - 144798 1.9 132 73 Op 1 . + CDS 144820 - 145584 1081 ## COG2134 CDP-diacylglycerol pyrophosphatase 133 73 Op 2 . + CDS 145649 - 146953 1832 ## COG0471 Di- and tricarboxylate transporters + Term 146962 - 147010 2.4 - Term 146950 - 146997 11.2 134 74 Op 1 . - CDS 147046 - 147813 824 ## COG0149 Triosephosphate isomerase - Prom 147840 - 147899 1.9 - Term 147840 - 147870 2.1 135 74 Op 2 . - CDS 147923 - 148486 767 ## Kvar_0097 hypothetical protein - Prom 148546 - 148605 3.8 + Prom 148553 - 148612 3.9 136 75 Tu 1 . + CDS 148635 - 149063 633 ## COG3152 Predicted membrane protein + Term 149101 - 149140 -0.2 137 76 Tu 1 . - CDS 149064 - 149810 1229 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 149889 - 149948 1.7 - Term 149902 - 149943 7.2 138 77 Op 1 . - CDS 149961 - 150971 1487 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 139 77 Op 2 4/0.303 - CDS 151022 - 153103 2615 ## COG1200 RecG-like helicase 140 77 Op 3 5/0.202 - CDS 153109 - 153798 739 ## COG0566 rRNA methylases 141 77 Op 4 18/0.000 - CDS 153803 - 155923 2421 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 142 77 Op 5 25/0.000 - CDS 155942 - 156217 407 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 143 77 Op 6 . - CDS 156272 - 156895 648 ## COG0194 Guanylate kinase - Prom 156937 - 156996 5.2 + Prom 156927 - 156986 4.6 144 78 Tu 1 . + CDS 157153 - 158832 1129 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 145 79 Tu 1 . - CDS 158838 - 159455 641 ## COG2860 Predicted membrane protein - Prom 159698 - 159757 6.1 + Prom 159549 - 159608 4.0 146 80 Tu 1 . + CDS 159731 - 160990 982 ## COG0038 Chloride channel protein EriC + Term 161005 - 161032 1.5 - Term 160993 - 161020 1.5 147 81 Tu 1 . - CDS 161040 - 161903 1256 ## COG1561 Uncharacterized stress-induced protein - Prom 162090 - 162149 6.3 + Prom 162434 - 162493 5.3 148 82 Tu 1 . + CDS 162546 - 164246 39 ## COG3176 Putative hemolysin + Prom 164259 - 164318 3.6 149 83 Op 1 10/0.030 + CDS 164372 - 165298 209 ## COG0845 Membrane-fusion protein 150 83 Op 2 45/0.000 + CDS 165291 - 166208 387 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 151 83 Op 3 . + CDS 166195 - 167334 761 ## COG0842 ABC-type multidrug transport system, permease component + Prom 167341 - 167400 3.3 152 83 Op 4 6/0.121 + CDS 167430 - 168146 874 ## COG0689 RNase PH + Term 168154 - 168183 2.1 + Prom 168172 - 168231 1.8 153 84 Tu 1 . + CDS 168258 - 168899 984 ## COG0461 Orotate phosphoribosyltransferase + Term 168907 - 168940 6.1 154 85 Tu 1 . - CDS 168937 - 169953 637 ## COG3386 Gluconolactonase - Prom 170038 - 170097 1.7 - Term 170088 - 170121 5.4 155 86 Tu 1 . - CDS 170129 - 170725 739 ## COG1309 Transcriptional regulator - Term 170756 - 170810 3.4 156 87 Op 1 5/0.202 - CDS 170850 - 171308 477 ## COG0756 dUTPase 157 87 Op 2 . - CDS 171286 - 172500 1183 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase + Prom 172479 - 172538 1.8 158 88 Tu 1 . + CDS 172673 - 173338 530 ## COG2003 DNA repair proteins + Term 173340 - 173374 -0.9 + Prom 173356 - 173415 3.4 159 89 Op 1 16/0.000 + CDS 173555 - 173791 403 ## PROTEIN SUPPORTED gi|146309769|ref|YP_001174843.1| 50S ribosomal protein L28 160 89 Op 2 5/0.202 + CDS 173812 - 173979 282 ## PROTEIN SUPPORTED gi|152972482|ref|YP_001337628.1| 50S ribosomal protein L33 + Term 173994 - 174037 7.1 + Prom 174006 - 174065 3.1 161 90 Tu 1 . + CDS 174115 - 174924 1033 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 174929 - 174980 6.3 162 91 Op 1 1/0.727 - CDS 175056 - 175535 378 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 163 91 Op 2 1/0.727 - CDS 175538 - 176308 882 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 164 91 Op 3 1/0.727 - CDS 176308 - 177582 1644 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 177608 - 177667 1.9 165 92 Op 1 26/0.000 - CDS 177674 - 178663 1085 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 166 92 Op 2 25/0.000 - CDS 178693 - 179787 1301 ## COG0438 Glycosyltransferase 167 92 Op 3 5/0.202 - CDS 179790 - 180917 1558 ## COG0438 Glycosyltransferase 168 92 Op 4 . - CDS 180914 - 181990 1105 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 182237 - 182296 3.5 169 93 Op 1 . + CDS 182102 - 183064 830 ## Kvar_0133 WalW protein 170 93 Op 2 . + CDS 183083 - 184162 776 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 184175 - 184222 4.2 - Term 184172 - 184199 1.5 171 94 Op 1 . - CDS 184206 - 185375 1667 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 172 94 Op 2 . - CDS 185353 - 186261 761 ## Kvar_0136 lipopolysaccharide core biosynthesis protein RfaZ 173 94 Op 3 11/0.030 - CDS 186261 - 187202 1057 ## COG0859 ADP-heptose:LPS heptosyltransferase 174 94 Op 4 6/0.121 - CDS 187236 - 188294 1303 ## COG0859 ADP-heptose:LPS heptosyltransferase 175 94 Op 5 . - CDS 188303 - 189235 1387 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 189417 - 189476 3.4 + Prom 189364 - 189423 5.3 176 95 Op 1 9/0.040 + CDS 189449 - 190642 1777 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 177 95 Op 2 5/0.202 + CDS 190655 - 191680 1521 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 191714 - 191741 1.5 + Prom 191717 - 191776 4.1 178 96 Tu 1 . + CDS 191850 - 192638 773 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Term 192591 - 192634 4.4 179 97 Op 1 3/0.424 - CDS 192644 - 193600 1070 ## COG2861 Uncharacterized protein conserved in bacteria 180 97 Op 2 4/0.303 - CDS 193604 - 194875 1086 ## COG4942 Membrane-bound metallopeptidase 181 97 Op 3 . - CDS 194885 - 196429 2037 ## COG0696 Phosphoglyceromutase - Prom 196461 - 196520 4.7 + Prom 196578 - 196637 5.2 182 98 Tu 1 . + CDS 196675 - 197106 563 ## COG0607 Rhodanese-related sulfurtransferase + Term 197114 - 197145 -0.3 183 99 Op 1 9/0.040 + CDS 197211 - 197462 298 ## COG0695 Glutaredoxin and related proteins + Term 197470 - 197503 3.9 184 99 Op 2 7/0.061 + CDS 197523 - 197990 647 ## COG1952 Preprotein translocase subunit SecB 185 99 Op 3 6/0.121 + CDS 197990 - 199009 1247 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 199029 - 199070 5.3 186 100 Tu 1 . + CDS 199083 - 199904 1111 ## COG1045 Serine acetyltransferase 187 101 Tu 1 . - CDS 199986 - 200459 550 ## COG0219 Predicted rRNA methylase (SpoU class) - Prom 200480 - 200539 2.1 188 102 Op 1 5/0.202 - CDS 200711 - 201895 1863 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 189 102 Op 2 4/0.303 - CDS 201895 - 202668 774 ## COG2186 Transcriptional regulators 190 102 Op 3 . - CDS 202665 - 204320 2539 ## COG1620 L-lactate permease - Prom 204440 - 204499 2.0 - Term 204563 - 204599 6.8 191 103 Tu 1 . - CDS 204605 - 204967 663 ## CKO_05058 hypothetical protein - Prom 205210 - 205269 4.4 + Prom 204958 - 205017 5.2 192 104 Tu 1 . + CDS 205240 - 205464 213 ## Kvar_0156 hypothetical protein 193 105 Op 1 7/0.061 - CDS 205453 - 206049 655 ## COG3722 Transcriptional regulator 194 105 Op 2 11/0.030 - CDS 206049 - 207197 1493 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 195 106 Tu 1 . - CDS 207300 - 209207 2510 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Prom 209437 - 209496 4.3 196 107 Op 1 . + CDS 209746 - 210114 263 ## Kvar_0160 hypothetical protein 197 107 Op 2 . + CDS 210118 - 211254 1492 ## COG1566 Multidrug resistance efflux pump + Term 211266 - 211303 6.8 + Prom 211264 - 211323 1.5 198 108 Tu 1 . + CDS 211361 - 211969 637 ## COG0625 Glutathione S-transferase 199 109 Op 1 7/0.061 + CDS 212075 - 213463 1461 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 200 109 Op 2 . + CDS 213460 - 215301 2024 ## COG3276 Selenocysteine-specific translation elongation factor + Prom 215459 - 215518 1.8 201 110 Tu 1 . + CDS 215546 - 216031 254 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Term 215996 - 216028 4.6 202 111 Op 1 . - CDS 216074 - 217330 1549 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase - Prom 217360 - 217419 2.2 203 111 Op 2 . - CDS 217499 - 219580 2531 ## COG0366 Glycosidases - Prom 219607 - 219666 3.4 204 112 Tu 1 . + CDS 220102 - 220665 529 ## COG2992 Uncharacterized FlgJ-related protein + Term 220670 - 220707 6.1 - Term 220627 - 220655 -0.3 205 113 Tu 1 . - CDS 220704 - 221882 1301 ## COG1609 Transcriptional regulators 206 114 Op 1 11/0.030 - CDS 222117 - 223298 1712 ## COG4214 ABC-type xylose transport system, permease component 207 114 Op 2 11/0.030 - CDS 223276 - 224817 204 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 224843 - 224877 8.3 208 114 Op 3 . - CDS 224882 - 225877 1153 ## COG4213 ABC-type xylose transport system, periplasmic component - Prom 226027 - 226086 4.6 + Prom 226280 - 226339 3.1 209 115 Op 1 11/0.030 + CDS 226383 - 227705 1983 ## COG2115 Xylose isomerase 210 115 Op 2 3/0.424 + CDS 227798 - 229252 1774 ## COG1070 Sugar (pentulose and hexulose) kinases 211 116 Op 1 1/0.727 + CDS 229454 - 229792 486 ## COG4682 Predicted membrane protein 212 116 Op 2 . + CDS 229827 - 230270 664 ## COG4682 Predicted membrane protein - Term 230243 - 230280 -0.7 213 117 Tu 1 . - CDS 230297 - 231292 1078 ## COG3274 Uncharacterized protein conserved in bacteria - Prom 231400 - 231459 2.2 + Prom 231359 - 231418 3.2 214 118 Tu 1 . + CDS 231472 - 231771 319 ## KPK_0181 hypothetical protein + Prom 231804 - 231863 5.0 215 119 Op 1 19/0.000 + CDS 231899 - 232810 1402 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 216 119 Op 2 . + CDS 232820 - 234889 2901 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 234910 - 234941 2.5 + Prom 234917 - 234976 4.8 217 120 Tu 1 . + CDS 235156 - 235368 197 ## KPN_03921 small toxic polypeptide + Term 235457 - 235488 4.1 + Prom 235435 - 235494 7.3 218 121 Tu 1 . + CDS 235670 - 237289 1714 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 237327 - 237368 7.9 219 122 Tu 1 4/0.303 - CDS 237388 - 237600 305 ## COG1278 Cold shock proteins - Prom 237628 - 237687 3.8 220 123 Tu 1 . - CDS 237853 - 238143 269 ## COG2944 Predicted transcriptional regulator - Prom 238188 - 238247 3.4 - Term 238345 - 238386 5.1 221 124 Tu 1 . - CDS 238389 - 239744 1907 ## COG0477 Permeases of the major facilitator superfamily + Prom 239961 - 240020 5.7 222 125 Tu 1 . + CDS 240186 - 240896 950 ## Kvar_0187 lipoprotein + Term 240965 - 241003 1.4 - Term 240948 - 240992 3.1 223 126 Op 1 3/0.424 - CDS 241005 - 241976 1185 ## COG1052 Lactate dehydrogenase and related dehydrogenases 224 126 Op 2 4/0.303 - CDS 242001 - 243281 1678 ## COG0477 Permeases of the major facilitator superfamily 225 127 Op 1 . - CDS 243386 - 244321 1236 ## COG0524 Sugar kinases, ribokinase family 226 127 Op 2 . - CDS 244325 - 245074 812 ## Kvar_0191 xylose isomerase 227 128 Tu 1 . - CDS 245186 - 246202 1324 ## COG1609 Transcriptional regulators - Prom 246226 - 246285 2.7 - Term 246249 - 246296 5.9 228 129 Tu 1 . - CDS 246306 - 246968 975 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 247012 - 247071 2.0 + Prom 246942 - 247001 5.3 229 130 Tu 1 . + CDS 247136 - 249466 2946 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 230 131 Op 1 5/0.202 - CDS 249435 - 249875 556 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 231 131 Op 2 . - CDS 249853 - 250434 366 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Prom 250509 - 250568 3.5 + Prom 250457 - 250516 4.5 232 132 Tu 1 . + CDS 250578 - 251222 394 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion + Term 251235 - 251265 -1.0 + Prom 251379 - 251438 2.4 233 133 Tu 1 . + CDS 251462 - 252667 1902 ## COG0477 Permeases of the major facilitator superfamily + Prom 252744 - 252803 3.2 234 134 Tu 1 . + CDS 252910 - 254583 2171 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 254647 - 254687 9.3 + Prom 254592 - 254651 2.2 235 135 Tu 1 . + CDS 254780 - 256174 1387 ## COG0666 FOG: Ankyrin repeat + Term 256381 - 256411 4.3 + TRNA 256294 - 256370 85.1 # Pro CGG 0 0 + Prom 257100 - 257159 5.9 236 136 Op 1 38/0.000 + CDS 257207 - 258814 2065 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 258860 - 258900 2.1 237 136 Op 2 49/0.000 + CDS 258949 - 259968 350 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 238 136 Op 3 44/0.000 + CDS 259978 - 260880 1624 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 239 136 Op 4 44/0.000 + CDS 260891 - 261874 592 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 240 136 Op 5 . + CDS 261871 - 262884 799 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 262892 - 262925 6.1 241 137 Op 1 1/0.727 + CDS 263926 - 264729 822 ## COG1192 ATPases involved in chromosome partitioning 242 137 Op 2 . + CDS 264749 - 266860 2481 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 243 137 Op 3 . + CDS 266857 - 269289 2529 ## Kvar_0209 cellulose synthase BcsB 244 137 Op 4 . + CDS 269313 - 273341 5224 ## COG0457 FOG: TPR repeat 245 137 Op 5 . + CDS 273341 - 273817 448 ## Kvar_0211 cellulose synthase operon protein D 246 137 Op 6 . + CDS 273829 - 274830 1443 ## COG3405 Endoglucanase Y + Term 274907 - 274948 5.5 247 138 Op 1 . - CDS 274938 - 276617 1987 ## KPK_0217 cellulose biosynthesis protein BcsG 248 138 Op 2 . - CDS 276614 - 276811 194 ## Kvar_0214 celllulose biosynthesis operon protein BcsF/YhjT 249 138 Op 3 . - CDS 276811 - 278310 1389 ## Kvar_0215 cellulose biosynthesis protein BcsE - Prom 278392 - 278451 4.2 + Prom 278410 - 278469 4.5 250 139 Op 1 . + CDS 278533 - 278721 171 ## Kvar_0216 hypothetical protein 251 139 Op 2 1/0.727 + CDS 278733 - 279464 877 ## COG1192 ATPases involved in chromosome partitioning 252 139 Op 3 . + CDS 279461 - 282079 3087 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 253 139 Op 4 . + CDS 282090 - 284435 3009 ## KPK_0223 cellulose synthase regulator protein 254 139 Op 5 4/0.303 + CDS 284439 - 285548 1349 ## COG3405 Endoglucanase Y 255 139 Op 6 5/0.202 + CDS 285530 - 289009 4380 ## COG0457 FOG: TPR repeat 256 140 Tu 1 . + CDS 289253 - 291259 2114 ## COG2200 FOG: EAL domain + Term 291264 - 291303 1.1 + Prom 291286 - 291345 3.6 257 141 Tu 1 . + CDS 291416 - 292702 1836 ## COG1301 Na+/H+-dicarboxylate symporters + Prom 292704 - 292763 4.4 258 142 Tu 1 . + CDS 292965 - 294425 1874 ## COG0612 Predicted Zn-dependent peptidases + Term 294629 - 294655 -0.6 - Term 294418 - 294464 12.2 259 143 Tu 1 . - CDS 294479 - 295408 1209 ## COG0524 Sugar kinases, ribokinase family - Prom 295553 - 295612 3.2 + Prom 295515 - 295574 3.5 260 144 Tu 1 . + CDS 295603 - 297654 2300 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 261 145 Tu 1 . - CDS 297692 - 299014 2227 ## COG0477 Permeases of the major facilitator superfamily - Prom 299174 - 299233 4.5 - Term 299229 - 299280 10.2 262 146 Op 1 . - CDS 299286 - 300317 1419 ## COG1295 Predicted membrane protein - Prom 300350 - 300409 5.7 263 146 Op 2 . - CDS 300424 - 301323 1117 ## COG0583 Transcriptional regulator - Prom 301358 - 301417 4.5 + Prom 301352 - 301411 4.3 264 147 Tu 1 . + CDS 301443 - 302201 185 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 265 148 Op 1 . - CDS 302236 - 302769 172 ## PROTEIN SUPPORTED gi|227395847|ref|ZP_03879169.1| acetyltransferase, ribosomal protein N-acetylase 266 148 Op 2 . - CDS 302836 - 304488 2321 ## COG1626 Neutral trehalase - Prom 304621 - 304680 5.3 - Term 304575 - 304602 -0.8 267 149 Tu 1 . - CDS 304728 - 305921 1427 ## COG1454 Alcohol dehydrogenase, class IV - Prom 306005 - 306064 2.6 268 150 Tu 1 . + CDS 305991 - 306635 726 ## COG0625 Glutathione S-transferase + Term 306647 - 306675 2.3 - Term 306629 - 306671 5.6 269 151 Op 1 7/0.061 - CDS 306688 - 308040 495 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 270 151 Op 2 . - CDS 308113 - 308955 1187 ## COG2961 Protein involved in catabolism of external DNA - Prom 309058 - 309117 3.5 + Prom 309032 - 309091 2.5 271 152 Tu 1 . + CDS 309149 - 310420 1810 ## COG0671 Membrane-associated phospholipid phosphatase + Term 310429 - 310465 5.0 272 153 Tu 1 . + CDS 310603 - 312645 3184 ## COG0339 Zn-dependent oligopeptidases + Term 312680 - 312709 3.5 273 154 Tu 1 . + CDS 312749 - 313405 1031 ## COG0500 SAM-dependent methyltransferases + Term 313554 - 313581 -0.1 274 155 Tu 1 . - CDS 313551 - 315023 2512 ## COG3104 Dipeptide/tripeptide permease - Prom 315127 - 315186 4.9 - Term 315223 - 315257 7.0 275 156 Tu 1 . - CDS 315280 - 315717 816 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 315900 - 315959 6.3 + Prom 315901 - 315960 3.5 276 157 Tu 1 . + CDS 316100 - 316435 293 ## Kvar_0242 universal stress protein B - Term 316446 - 316477 3.2 277 158 Tu 1 . - CDS 316495 - 317991 1706 ## COG0306 Phosphate/sulphate permeases - Prom 318144 - 318203 3.2 + Prom 318054 - 318113 3.2 278 159 Tu 1 . + CDS 318221 - 319414 1312 ## COG2081 Predicted flavoproteins + Term 319429 - 319467 0.5 279 160 Tu 1 . - CDS 319446 - 321329 1244 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - Prom 321360 - 321419 6.0 280 161 Op 1 . - CDS 321471 - 322634 1063 ## COG3964 Predicted amidohydrolase 281 161 Op 2 2/0.576 - CDS 322647 - 324041 1686 ## COG0471 Di- and tricarboxylate transporters 282 161 Op 3 . - CDS 324106 - 324804 760 ## COG0684 Demethylmenaquinone methyltransferase 283 161 Op 4 . - CDS 324815 - 325768 789 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 325851 - 325910 10.1 + Prom 325831 - 325890 14.5 284 162 Tu 1 . + CDS 326105 - 326380 199 ## KPK_0256 transcriptional regulator, LysR family + Term 326381 - 326414 2.7 - Term 326369 - 326402 2.7 285 163 Tu 1 . - CDS 326415 - 327428 1673 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 327455 - 327514 1.5 + Prom 327663 - 327722 3.5 286 164 Op 1 . + CDS 327804 - 328100 83 ## ROD_43141 hypothetical protein 287 164 Op 2 . + CDS 328097 - 328456 410 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters - Term 328401 - 328451 2.2 288 165 Op 1 3/0.424 - CDS 328484 - 328885 419 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 289 165 Op 2 17/0.000 - CDS 328873 - 329673 410 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 290 165 Op 3 44/0.000 - CDS 329661 - 330425 172 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 291 165 Op 4 49/0.000 - CDS 330425 - 331258 1165 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 292 165 Op 5 38/0.000 - CDS 331255 - 332199 1289 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 293 165 Op 6 1/0.727 - CDS 332199 - 333767 1716 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 333806 - 333865 4.5 - Term 333780 - 333819 1.2 294 166 Tu 1 . - CDS 333907 - 334767 1095 ## COG0583 Transcriptional regulator - Prom 334850 - 334909 4.0 + Prom 334729 - 334788 3.9 295 167 Tu 1 . + CDS 334868 - 335371 702 ## COG3479 Phenolic acid decarboxylase + Term 335390 - 335443 0.7 296 168 Op 1 5/0.202 + CDS 335768 - 336907 1177 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 297 168 Op 2 12/0.020 + CDS 336909 - 337892 1218 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 298 168 Op 3 8/0.040 + CDS 337889 - 339874 2725 ## COG0451 Nucleoside-diphosphate-sugar epimerases 299 168 Op 4 6/0.121 + CDS 339871 - 340773 822 ## COG0726 Predicted xylanase/chitin deacetylase 300 168 Op 5 5/0.202 + CDS 340773 - 342428 2587 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 301 168 Op 6 9/0.040 + CDS 342425 - 342763 430 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 302 168 Op 7 . + CDS 342763 - 343143 498 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 303 169 Tu 1 . - CDS 343140 - 344189 1546 ## COG0628 Predicted permease - Prom 344212 - 344271 3.4 + Prom 344101 - 344160 3.3 304 170 Tu 1 . + CDS 344323 - 345543 1588 ## COG0477 Permeases of the major facilitator superfamily - Term 345485 - 345528 10.6 305 171 Op 1 . - CDS 345544 - 346101 834 ## Kvar_0263 hypothetical protein 306 171 Op 2 . - CDS 346175 - 346840 1003 ## COG1738 Uncharacterized conserved protein - Prom 346925 - 346984 5.8 + Prom 346966 - 347025 4.3 307 172 Tu 1 . + CDS 347047 - 347292 352 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 308 173 Tu 1 . - CDS 347680 - 349719 2502 ## COG2217 Cation transport ATPase - Prom 349855 - 349914 2.4 - Term 349925 - 349956 3.4 309 174 Tu 1 . - CDS 349969 - 350595 983 ## COG3714 Predicted membrane protein - Prom 350710 - 350769 4.0 + Prom 350654 - 350713 5.1 310 175 Tu 1 . + CDS 350737 - 351096 291 ## Kvar_0268 hypothetical protein 311 176 Op 1 6/0.121 - CDS 351110 - 351385 493 ## COG3776 Predicted membrane protein 312 176 Op 2 . - CDS 351375 - 351971 690 ## COG0742 N6-adenine-specific methylase - Prom 351997 - 352056 3.4 + Prom 352044 - 352103 3.5 313 177 Op 1 9/0.040 + CDS 352155 - 353669 742 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 314 177 Op 2 28/0.000 + CDS 353672 - 354340 351 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 315 177 Op 3 7/0.061 + CDS 354351 - 355388 1382 ## COG2177 Cell division protein + Prom 355495 - 355554 5.5 316 178 Tu 1 . + CDS 355658 - 356512 1393 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 356556 - 356591 5.0 317 179 Tu 1 . - CDS 356565 - 358088 1308 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 358115 - 358174 5.6 318 180 Tu 1 . + CDS 358207 - 359472 1566 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 359533 - 359567 1.9 + Prom 359541 - 359600 2.5 319 181 Tu 1 . + CDS 359620 - 360864 1307 ## COG0814 Amino acid permeases + Term 360882 - 360919 2.1 + Prom 360908 - 360967 6.3 320 182 Tu 1 . + CDS 361122 - 362225 1520 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component + Term 362383 - 362434 3.0 321 183 Tu 1 . - CDS 362497 - 362880 531 ## KPK_0293 acetyltransferase, GNAT family - Prom 363022 - 363081 3.9 + Prom 363031 - 363090 4.8 322 184 Op 1 20/0.000 + CDS 363304 - 364413 1645 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 323 184 Op 2 24/0.000 + CDS 364475 - 365401 1504 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 324 184 Op 3 19/0.000 + CDS 365398 - 366675 1995 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 325 184 Op 4 18/0.000 + CDS 366672 - 367439 264 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 326 184 Op 5 1/0.727 + CDS 367441 - 368154 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 368166 - 368199 0.3 + Prom 368247 - 368306 3.5 327 185 Op 1 1/0.727 + CDS 368326 - 368547 169 ## COG2161 Antitoxin of toxin-antitoxin stability system 328 185 Op 2 1/0.727 + CDS 368544 - 368912 86 ## COG3654 Prophage maintenance system killer protein + Prom 369041 - 369100 6.2 329 186 Op 1 35/0.000 + CDS 369204 - 370520 1841 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 370577 - 370616 5.2 330 186 Op 2 38/0.000 + CDS 370627 - 371514 1359 ## COG1175 ABC-type sugar transport systems, permease components 331 186 Op 3 21/0.000 + CDS 371511 - 372356 1235 ## COG0395 ABC-type sugar transport system, permease component 332 186 Op 4 4/0.303 + CDS 372358 - 373428 1318 ## COG3839 ABC-type sugar transport systems, ATPase components 333 186 Op 5 . + CDS 373425 - 374165 907 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 374169 - 374229 3.1 - Term 374064 - 374107 7.0 334 187 Tu 1 . - CDS 374187 - 374507 541 ## Kvar_0292 hypothetical protein - Prom 374532 - 374591 3.0 335 188 Tu 1 . + CDS 374631 - 376376 2272 ## COG0405 Gamma-glutamyltransferase - Term 376477 - 376503 -0.6 336 189 Tu 1 . - CDS 376584 - 377072 372 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase - Prom 377100 - 377159 4.7 - Term 377100 - 377135 -0.8 337 190 Tu 1 . - CDS 377300 - 377797 439 ## COG1664 Integral membrane protein CcmA involved in cell shape determination - Prom 377921 - 377980 2.6 + Prom 378041 - 378100 2.7 338 191 Tu 1 5/0.202 + CDS 378218 - 379255 1351 ## COG0673 Predicted dehydrogenases and related proteins + Prom 379271 - 379330 6.0 339 192 Tu 1 4/0.303 + CDS 379377 - 380072 890 ## COG1741 Pirin-related protein + Term 380101 - 380147 9.1 340 193 Tu 1 . + CDS 380187 - 381182 1240 ## COG1609 Transcriptional regulators 341 194 Op 1 4/0.303 + CDS 381402 - 381893 596 ## COG3265 Gluconate kinase 342 194 Op 2 . + CDS 381956 - 383233 1863 ## COG2610 H+/gluconate symporter and related permeases + Term 383267 - 383304 8.1 - Term 383255 - 383292 8.1 343 195 Tu 1 . - CDS 383410 - 383592 68 ## KPK_0314 hypothetical protein + Prom 383581 - 383640 5.1 344 196 Tu 1 . + CDS 383696 - 384802 1510 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 384821 - 384850 -0.5 + Prom 384829 - 384888 5.6 345 197 Op 1 9/0.040 + CDS 385041 - 387227 2912 ## COG0296 1,4-alpha-glucan branching enzyme 346 197 Op 2 7/0.061 + CDS 387224 - 389200 1568 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 347 197 Op 3 17/0.000 + CDS 389281 - 390576 1433 ## COG0448 ADP-glucose pyrophosphorylase 348 197 Op 4 10/0.030 + CDS 390576 - 392009 1915 ## COG0297 Glycogen synthase 349 197 Op 5 . + CDS 392027 - 394474 3614 ## COG0058 Glucan phosphorylase + Term 394494 - 394523 3.5 + Prom 394601 - 394660 6.8 350 198 Op 1 4/0.303 + CDS 394689 - 395036 227 ## COG4683 Uncharacterized protein conserved in bacteria 351 198 Op 2 . + CDS 395036 - 395335 83 ## COG1396 Predicted transcriptional regulators + Term 395339 - 395387 1.2 352 199 Tu 1 . - CDS 395398 - 396906 1969 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 396952 - 397011 5.6 + Prom 397015 - 397074 4.1 353 200 Op 1 4/0.303 + CDS 397111 - 397440 559 ## COG0607 Rhodanese-related sulfurtransferase 354 200 Op 2 6/0.121 + CDS 397491 - 398321 844 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 355 200 Op 3 . + CDS 398371 - 399129 1044 ## COG1349 Transcriptional regulators of sugar metabolism + Term 399206 - 399230 -1.0 - Term 398923 - 398951 0.5 356 201 Tu 1 . - CDS 399145 - 401850 3235 ## COG2909 ATP-dependent transcriptional regulator - Prom 401906 - 401965 3.5 357 202 Op 1 7/0.061 + CDS 402475 - 404865 3467 ## COG0058 Glucan phosphorylase 358 202 Op 2 . + CDS 404876 - 406972 2357 ## COG1640 4-alpha-glucanotransferase + Term 407023 - 407061 12.3 - Term 407011 - 407049 12.3 359 203 Tu 1 . - CDS 407071 - 408387 1928 ## COG2610 H+/gluconate symporter and related permeases - Prom 408543 - 408602 2.8 - Term 408474 - 408516 -1.0 360 204 Op 1 5/0.202 - CDS 408724 - 409299 889 ## COG0694 Thioredoxin-like proteins and domains 361 204 Op 2 . - CDS 409358 - 410032 168 ## COG1040 Predicted amidophosphoribosyltransferases - Prom 410180 - 410239 2.4 + Prom 409980 - 410039 2.5 362 205 Tu 1 . + CDS 410072 - 410845 810 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 410887 - 410946 2.9 363 206 Tu 1 . + CDS 410966 - 411235 327 ## Kvar_0320 hypothetical protein + Term 411238 - 411293 5.2 - Term 411225 - 411280 9.0 364 207 Op 1 . - CDS 411322 - 411534 228 ## KPK_0335 hypothetical protein 365 207 Op 2 22/0.000 - CDS 411571 - 413889 3291 ## COG0370 Fe2+ transport system protein B 366 207 Op 3 4/0.303 - CDS 413918 - 414145 235 ## COG1918 Fe2+ transport system protein A - Prom 414245 - 414304 5.3 - Term 414527 - 414558 4.1 367 208 Tu 1 1/0.727 - CDS 414566 - 416896 1635 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein 368 209 Tu 1 . - CDS 416997 - 417470 697 ## COG0782 Transcription elongation factor - Prom 417527 - 417586 4.2 + Prom 417555 - 417614 7.6 369 210 Op 1 40/0.000 + CDS 417698 - 418417 1012 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 370 210 Op 2 . + CDS 418414 - 419769 1696 ## COG0642 Signal transduction histidine kinase + Term 419812 - 419839 1.5 - Term 419800 - 419827 1.5 371 211 Tu 1 . - CDS 419847 - 421469 2241 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Prom 421667 - 421726 6.1 - Term 421761 - 421813 14.1 372 212 Op 1 3/0.424 - CDS 421829 - 422707 1027 ## COG1281 Disulfide bond chaperones of the HSP33 family 373 212 Op 2 4/0.303 - CDS 422732 - 423133 505 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 374 212 Op 3 . - CDS 423130 - 423813 787 ## COG1011 Predicted hydrolase (HAD superfamily) - Term 423827 - 423866 11.1 375 213 Tu 1 . - CDS 423874 - 426009 2105 ## Kvar_0332 intracellular growth attenuator IgaA - Prom 426122 - 426181 3.5 + Prom 426178 - 426237 4.5 376 214 Tu 1 . + CDS 426318 - 426884 807 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 426916 - 426941 -0.5 - Term 426904 - 426929 -0.5 377 215 Tu 1 . - CDS 426938 - 429496 2921 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 429520 - 429579 4.3 + Prom 429484 - 429543 3.0 378 216 Op 1 . + CDS 429615 - 430415 705 ## Kvar_0335 HofM protein 379 216 Op 2 . + CDS 430399 - 430932 378 ## COG3166 Tfp pilus assembly protein PilN 380 216 Op 3 . + CDS 430922 - 431350 317 ## Kvar_0337 hypothetical protein 381 216 Op 4 . + CDS 431340 - 431720 214 ## KPN_03763 hypothetical protein 382 216 Op 5 8/0.040 + CDS 431659 - 432897 1292 ## COG4796 Type II secretory pathway, component HofQ + Prom 433002 - 433061 3.8 383 217 Op 1 20/0.000 + CDS 433168 - 433689 550 ## COG0703 Shikimate kinase + Term 433799 - 433833 0.6 384 217 Op 2 7/0.061 + CDS 433856 - 434839 1163 ## COG0337 3-dehydroquinate synthetase + Term 434849 - 434876 1.5 + Prom 434841 - 434900 2.1 385 218 Op 1 6/0.121 + CDS 434924 - 436213 859 ## COG3266 Uncharacterized protein conserved in bacteria 386 218 Op 2 6/0.121 + CDS 436292 - 437119 825 ## COG0338 Site-specific DNA methylase 387 218 Op 3 9/0.040 + CDS 437137 - 437814 879 ## COG0036 Pentose-5-phosphate-3-epimerase 388 218 Op 4 6/0.121 + CDS 437807 - 438568 1000 ## COG0546 Predicted phosphatases 389 218 Op 5 . + CDS 438561 - 439565 1556 ## COG0180 Tryptophanyl-tRNA synthetase + Term 439579 - 439624 9.4 - Term 439566 - 439610 10.8 390 219 Op 1 . - CDS 439641 - 441014 1433 ## COG0007 Uroporphyrinogen-III methylase - Prom 441047 - 441106 2.6 391 219 Op 2 14/0.020 - CDS 441167 - 441493 431 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 392 219 Op 3 . - CDS 441490 - 444033 3140 ## COG1251 NAD(P)H-nitrite reductase - Prom 444244 - 444303 2.3 + Prom 444088 - 444147 3.5 393 220 Tu 1 . + CDS 444272 - 445594 1327 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Term 445546 - 445585 8.9 394 221 Tu 1 . - CDS 445591 - 446778 1779 ## COG0477 Permeases of the major facilitator superfamily - Prom 446947 - 447006 5.9 + Prom 446903 - 446962 4.3 395 222 Tu 1 . + CDS 447056 - 447625 673 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Prom 447646 - 447705 3.4 396 223 Op 1 . + CDS 447732 - 447899 160 ## KPN_03748 hypothetical protein 397 223 Op 2 4/0.303 + CDS 447889 - 448491 707 ## COG2184 Protein involved in cell division 398 223 Op 3 5/0.202 + CDS 448524 - 449087 669 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Prom 449092 - 449151 3.7 399 223 Op 4 . + CDS 449178 - 450398 1407 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 450436 - 450476 2.3 400 224 Op 1 4/0.303 - CDS 450388 - 452466 2584 ## COG1289 Predicted membrane protein - Term 452470 - 452509 8.2 401 224 Op 2 . - CDS 452518 - 453150 838 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 402 225 Tu 1 . + CDS 453457 - 453861 571 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 453891 - 453921 4.1 403 226 Op 1 6/0.121 - CDS 453917 - 454786 1219 ## COG3954 Phosphoribulokinase 404 226 Op 2 5/0.202 - CDS 454823 - 455041 344 ## COG3089 Uncharacterized protein conserved in bacteria 405 226 Op 3 3/0.424 - CDS 455038 - 456060 1110 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold - Prom 456085 - 456144 2.8 - Term 456200 - 456251 8.3 406 227 Tu 1 . - CDS 456262 - 458166 2406 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 458239 - 458298 2.2 + Prom 458156 - 458215 3.0 407 228 Op 1 7/0.061 + CDS 458343 - 458903 434 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 408 228 Op 2 3/0.424 + CDS 458890 - 460695 1049 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 409 228 Op 3 4/0.303 + CDS 460707 - 460907 322 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain + Term 460945 - 460986 0.7 + Prom 460914 - 460973 4.2 410 229 Tu 1 . + CDS 461001 - 461591 599 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 + Term 461624 - 461649 -0.5 - Term 461612 - 461637 -0.5 411 230 Tu 1 . - CDS 461650 - 461868 320 ## COG2900 Uncharacterized protein conserved in bacteria - Prom 461894 - 461953 2.8 + Prom 461980 - 462039 3.5 412 231 Tu 1 . + CDS 462091 - 462921 977 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 462932 - 462969 9.2 + Prom 462929 - 462988 4.9 413 232 Op 1 6/0.121 + CDS 463090 - 463812 792 ## COG2964 Uncharacterized protein conserved in bacteria 414 232 Op 2 13/0.020 + CDS 463812 - 464198 266 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 415 232 Op 3 10/0.030 + CDS 464198 - 464557 365 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 416 232 Op 4 7/0.061 + CDS 464565 - 464852 238 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur + Term 464908 - 464942 2.0 + Prom 464855 - 464914 4.7 417 233 Op 1 56/0.000 + CDS 464977 - 465351 646 ## PROTEIN SUPPORTED gi|152972235|ref|YP_001337381.1| 30S ribosomal protein S12 418 233 Op 2 51/0.000 + CDS 465448 - 465918 782 ## PROTEIN SUPPORTED gi|206576912|ref|YP_002236273.1| ribosomal protein S7 419 233 Op 3 30/0.000 + CDS 466015 - 468129 1849 ## COG0480 Translation elongation factors (GTPases) 420 233 Op 4 . + CDS 468199 - 468297 76 ## COG0050 GTPases - translation elongation factors + Prom 468299 - 468358 80.3 421 234 Tu 1 . + CDS 468478 - 469500 1383 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Prom 470474 - 470533 3.9 422 235 Op 1 9/0.040 + CDS 470554 - 470748 133 ## COG2906 Bacterioferritin-associated ferredoxin 423 235 Op 2 . + CDS 470822 - 471298 782 ## COG2193 Bacterioferritin (cytochrome b1) 424 236 Tu 1 . - CDS 471282 - 471767 237 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases - Prom 471795 - 471854 1.6 + Prom 471922 - 471981 4.1 425 237 Op 1 40/0.000 + CDS 472149 - 472460 514 ## PROTEIN SUPPORTED gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 426 237 Op 2 58/0.000 + CDS 472493 - 473122 1058 ## PROTEIN SUPPORTED gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 427 237 Op 3 61/0.000 + CDS 473133 - 473738 993 ## PROTEIN SUPPORTED gi|152972226|ref|YP_001337372.1| 50S ribosomal protein L4 428 237 Op 4 61/0.000 + CDS 473735 - 474037 491 ## PROTEIN SUPPORTED gi|16762845|ref|NP_458462.1| 50S ribosomal protein L23 429 237 Op 5 60/0.000 + CDS 474055 - 474876 1434 ## PROTEIN SUPPORTED gi|152972224|ref|YP_001337370.1| 50S ribosomal protein L2 430 237 Op 6 59/0.000 + CDS 474893 - 475171 483 ## PROTEIN SUPPORTED gi|16762847|ref|NP_458464.1| 30S ribosomal protein S19 431 237 Op 7 61/0.000 + CDS 475186 - 475518 536 ## PROTEIN SUPPORTED gi|152972222|ref|YP_001337368.1| 50S ribosomal protein L22 432 237 Op 8 50/0.000 + CDS 475536 - 476234 1177 ## PROTEIN SUPPORTED gi|152972221|ref|YP_001337367.1| 30S ribosomal protein S3 433 237 Op 9 50/0.000 + CDS 476247 - 476657 696 ## PROTEIN SUPPORTED gi|146313378|ref|YP_001178452.1| 50S ribosomal protein L16 434 237 Op 10 50/0.000 + CDS 476657 - 476848 300 ## PROTEIN SUPPORTED gi|152972219|ref|YP_001337365.1| 50S ribosomal protein L29 435 237 Op 11 50/0.000 + CDS 476848 - 477102 424 ## PROTEIN SUPPORTED gi|152972218|ref|YP_001337364.1| 30S ribosomal protein S17 + Term 477124 - 477167 9.4 + Prom 477136 - 477195 7.8 436 238 Op 1 57/0.000 + CDS 477268 - 477639 618 ## PROTEIN SUPPORTED gi|152972217|ref|YP_001337363.1| 50S ribosomal protein L14 437 238 Op 2 48/0.000 + CDS 477650 - 477964 516 ## PROTEIN SUPPORTED gi|206578576|ref|YP_002236291.1| ribosomal protein L24 438 238 Op 3 50/0.000 + CDS 477979 - 478518 911 ## PROTEIN SUPPORTED gi|206579163|ref|YP_002236292.1| ribosomal protein L5 439 238 Op 4 50/0.000 + CDS 478533 - 478838 513 ## PROTEIN SUPPORTED gi|206580075|ref|YP_002236293.1| ribosomal protein S14 440 238 Op 5 55/0.000 + CDS 478872 - 479264 640 ## PROTEIN SUPPORTED gi|206580677|ref|YP_002236294.1| ribosomal protein S8 441 238 Op 6 46/0.000 + CDS 479277 - 479810 900 ## PROTEIN SUPPORTED gi|206579248|ref|YP_002236295.1| ribosomal protein L6 442 238 Op 7 56/0.000 + CDS 479820 - 480173 572 ## PROTEIN SUPPORTED gi|206581100|ref|YP_002236296.1| ribosomal protein L18 443 238 Op 8 50/0.000 + CDS 480188 - 480691 834 ## PROTEIN SUPPORTED gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 444 238 Op 9 48/0.000 + CDS 480695 - 480874 291 ## PROTEIN SUPPORTED gi|16762861|ref|NP_458478.1| 50S ribosomal protein L30 445 238 Op 10 53/0.000 + CDS 480878 - 481312 718 ## PROTEIN SUPPORTED gi|152972208|ref|YP_001337354.1| 50S ribosomal protein L15 446 238 Op 11 3/0.424 + CDS 481320 - 482651 1243 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 447 238 Op 12 . + CDS 482685 - 482801 198 ## PROTEIN SUPPORTED gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 + Term 482831 - 482872 9.1 + Prom 482843 - 482902 3.9 448 239 Op 1 48/0.000 + CDS 482948 - 483304 591 ## PROTEIN SUPPORTED gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 449 239 Op 2 36/0.000 + CDS 483321 - 483710 667 ## PROTEIN SUPPORTED gi|146313362|ref|YP_001178436.1| 30S ribosomal protein S11 450 239 Op 3 26/0.000 + CDS 483744 - 484364 1037 ## PROTEIN SUPPORTED gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 451 239 Op 4 50/0.000 + CDS 484390 - 485379 867 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 452 239 Op 5 . + CDS 485420 - 485806 643 ## PROTEIN SUPPORTED gi|152972202|ref|YP_001337348.1| 50S ribosomal protein L17 + Term 485827 - 485852 -0.5 + Prom 485836 - 485895 5.0 453 240 Op 1 . + CDS 485915 - 486283 315 ## Kvar_0410 DnaJ-like protein 454 240 Op 2 . + CDS 486286 - 486711 516 ## COG0789 Predicted transcriptional regulators + Term 486921 - 486980 12.6 - Term 486789 - 486830 1.3 455 241 Tu 1 . - CDS 486983 - 487396 394 ## COG1970 Large-conductance mechanosensitive channel - Prom 487472 - 487531 5.1 - Term 487501 - 487529 1.3 456 242 Op 1 8/0.040 - CDS 487537 - 488913 1095 ## COG0569 K+ transport systems, NAD-binding component 457 242 Op 2 20/0.000 - CDS 488927 - 490222 1373 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 490229 - 490257 1.3 458 242 Op 3 26/0.000 - CDS 490275 - 491222 594 ## COG0223 Methionyl-tRNA formyltransferase 459 242 Op 4 . - CDS 491237 - 491746 551 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 491785 - 491844 3.5 + Prom 491707 - 491766 2.7 460 243 Op 1 8/0.040 + CDS 491875 - 492999 421 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 461 243 Op 2 7/0.061 + CDS 492971 - 493444 472 ## COG2922 Uncharacterized protein conserved in bacteria 462 243 Op 3 6/0.121 + CDS 493471 - 494013 242 ## COG0551 Zn-finger domain associated with topoisomerase type I 463 243 Op 4 8/0.040 + CDS 494018 - 494590 366 ## COG0009 Putative translation factor (SUA5) 464 243 Op 5 . + CDS 494594 - 495412 391 ## COG0169 Shikimate 5-dehydrogenase 465 243 Op 6 . + CDS 495409 - 495666 226 ## Kvar_0423 hypothetical protein + Term 495727 - 495762 4.0 466 244 Tu 1 . - CDS 495642 - 496196 463 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily Predicted protein(s) >gi|289775432|gb|GG745511.1| GENE 1 128 - 829 466 233 aa, chain + ## HITS:1 COG:STM3888 KEGG:ns NR:ns ## COG: STM3888 COG2186 # Protein_GI_number: 16767172 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 234 370 79.0 1e-102 MSLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKT LTAKGMLLPRPRIGTRVMPRSSWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACF LAAANGTAEQKAQLNTLMEEMIALKRHFQRDRWIEVDMAWHEHIYEMSGNPFLSSFASLF HSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHPVNQ >gi|289775432|gb|GG745511.1| GENE 2 842 - 2239 1374 465 aa, chain + ## HITS:1 COG:STM3887 KEGG:ns NR:ns ## COG: STM3887 COG0477 # Protein_GI_number: 16767171 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 464 1 464 475 744 90.0 0 MSRKKGRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVA MLIPVSGWLADRFGTRRVFIIAVSLFTLGSLACALSSSLMELVIFRVIQGIGGAMMMPVA RLALLRAYPRSELLPVLNFVTMPGLVGPILGPVLGGVFVTWASWHWIFLINIPIGVIGIL YARKFMPNFTTPRRRFDITGFLLFGLSLVLFSSGIELFGEKIVATWLALAVIAVSLLLLV AYVRHARRHPAPLISLSLFKTHTFSVGIAGNLATRLGTGCVPFLMPLMLQVGFGYPAIIA GCMIAPTAIGSIIAKSTVTQVLRWFGYRKTLVGITVFIGLMIAQFSLQSPEMPLWMLLLP LFVLGMAMSTQFTSMNTITLADLTDDNASSGNSLLAVTQQLSISLGVAISAAVLRFYEGF DNASTVQQFHYTFITMGVITIVSALMFMLLRAKDGRNLISERHKR >gi|289775432|gb|GG745511.1| GENE 3 2236 - 3219 919 327 aa, chain - ## HITS:1 COG:STM3886 KEGG:ns NR:ns ## COG: STM3886 COG1609 # Protein_GI_number: 16767170 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 326 4 331 332 577 87.0 1e-164 MKDVARVAGVSTSTVSHVINKDRFVSEAITAKVDAAIKSLNYAPSALARSLKLNQTRTIG MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC TETHQPSPEIMQRYPSVPTVMMDWAPFDGDSDLIQDNSLLGGDMATQYLIDQGHSRIACI AGPLDKTPARLRLEGYHAAMARCGLPVADGYVVTSDFEFGGGFSAMQELLALPQRPQAVF VGNDAMAVGAYQALYQAGLHIPQDMALVGYDDIELARYMTPPLTTIHQPKDELGELAIDV LIHRMADPQQKQQRVQLTPELVVRGSA >gi|289775432|gb|GG745511.1| GENE 4 3232 - 4161 1100 309 aa, chain - ## HITS:1 COG:STM3885 KEGG:ns NR:ns ## COG: STM3885 COG0524 # Protein_GI_number: 16767169 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 443 82.0 1e-124 MKTAGKLVVLGSINADHILNLDAFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGADIAF IACTGDDDIGERIRRQLASDKIDVAPVRAVAGEATGVALIFVNAEGENVIGIHAGANAAL SVSQVEAEKERIASAQALLMQLESPLESVLAAAKIAHRHQTTVVLNPAPARELSDELLAL VDIITPNETEAEKLTGIRVESDEDAAKAADVLHAKGIGTVMITLGSRGVWLSAEGESRRI PGFRVQAIDTIAAGDTFNGALVTALLEGTSLPEAIRFAHAAAAIAVTRKGAQPSVPWRTE IDEFLAQQG >gi|289775432|gb|GG745511.1| GENE 5 4265 - 5155 1142 296 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 471 94.0 1e-133 MNMKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSLKDGAQKEADKLGYNLV VLDSQNNPAKELANVQDLTVRGARLLLINPTDSDAVGNAVKMANQAKIPVITLDRQATKG DVVSHIASDNVQGGKMAGDYIAKKVGESAKVIELQGIAGTSAARERGEGFKQAVAAHKFN VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD GTPDGEKAVNSGKLAATVAQLPEQIGAKGVETADKVLKGEKVEANYPVELKLVVKQ >gi|289775432|gb|GG745511.1| GENE 6 5183 - 6148 1366 321 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 468 95.0 1e-132 MTTQAVTGRRYFTKAWLMEQKSLIALLVLIAVVSTMSPNFFTVNNLFNILQQTSVNAIMA VGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVA KGRVQAFIATLVMMLLLRGVTMVYTNGSPINTGFSDNADLFGWFGIGRPLGIPTPVWIMA IVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYALCGMLASLAGIIEVA RLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSY YQMIVKAVVILLAVLVDNKKQ >gi|289775432|gb|GG745511.1| GENE 7 6154 - 7659 175 501 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 268 487 28 247 563 72 27 4e-11 MEALLQLKGIDKAFPGVKALSGAALNVYAGRVMALVGENGAGKSTMMKVLTGIYTRDAGS LLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKQMYA EADKLLAKLNLRFNSQKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLDEDRLIEMMVGR KLEDQYPHLDKAPGAVRLKVDNLCGPGVENVTFTLRQGEILGVAGLMGAGRTELMKVLYG ALPRSSGSVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS RAGGSLKHKDEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILD EPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLGGEFTRE QATQEVLMAAAVGKLNRVNQE >gi|289775432|gb|GG745511.1| GENE 8 7670 - 8089 365 139 aa, chain - ## HITS:1 COG:rbsD KEGG:ns NR:ns ## COG: rbsD COG1869 # Protein_GI_number: 16131616 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Escherichia coli K12 # 1 139 13 151 151 236 89.0 9e-63 MKKGTVLNADISAVISRLGHTDTLVVCDAGLPVPRSSTRIDMALTQGVPSFMQVLEVVTT EMQVEAAVIAEEIKTHNPQLHATLLTHLEQLQQHQGNTIEIRYTSHEQFKKQTADSQAVI RSGECSPFANIILCAGVTF >gi|289775432|gb|GG745511.1| GENE 9 8274 - 10142 2380 622 aa, chain - ## HITS:1 COG:ECs4689 KEGG:ns NR:ns ## COG: ECs4689 COG3158 # Protein_GI_number: 15833943 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Escherichia coli O157:H7 # 1 622 1 622 622 1113 92.0 0 MSTDNKQSLPALTLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLL IFTVSIKYITFVMRADNAGEGGILTLMSLAGRNTSARMTSVLVILGLIGGSFFYGEVVIT PAISVMSAIEGLEIIAPQLDTWIVPISIIVLTLLFVIQKHGTGMVGKLFAPIMLIWFLLL AVLGARSIYANPEVLQALNPYWAVHFFLQYKTVSFIALGAVVLSITGVEALYADMGHFGK LPIRVAWFSVVLPSLVLNYFGQGALLLKHPEAIKNPFFLLAPEWALIPMLIIATLATVIA SQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFINWLLYVSVVIVIVSFEHS SNLAAAYGIAVTGTMVLTSILSATVARKNWHWNKLFVGLMLVAFLCIDIPLFSANLDKIV SGGWLPLSLGLVMFTVMTTWKSERFRLLRRMHEHGNSLEAMISSLEKSPPVRVPGTAVYM SRALNVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPSFWRVVASY GWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLIIGKRPWYLRLRGKLYLLLQRNAL RAPDQFEIPPNRVIELGTQVEI >gi|289775432|gb|GG745511.1| GENE 10 10360 - 11859 1551 499 aa, chain + ## HITS:1 COG:STM3879 KEGG:ns NR:ns ## COG: STM3879 COG0714 # Protein_GI_number: 16767163 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Salmonella typhimurium LT2 # 1 498 1 497 498 806 84.0 0 MAQTHLLAERISRLSAALEKGLFERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK FAFQQARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTAGYLPEAEIVFLDEIWKAG PAILNTLLTAINERHFRNGAHEEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV QDKGNFRSMLVSQQDENINPVPSALQVSDEEFTQWQQQIGNIKLPDAVFELIFQLRQQLD ALPNAPYVSDRRWKKAIRLLQASAFFSGRDSIAPIDLILLKDCLWHNVESMNLMSQQLET LMTCHAWQQQAMLTRLGAIVQRRIQIQQQQSDKTALKVTRLGGMFSRKPHYELPAEIQGT TLTLLLQQPLKLHDMEVIHITFEREALANWLEKGGEIRGKLNGIGFAQLLNMDVDTSQHL VVRDVSLQGSRLALPGSASQENMPAEIRQQLEALDDEWHQQHNRFSEQQKCLFIPVEWLG RIEASLQDVGVQIKQAKQP >gi|289775432|gb|GG745511.1| GENE 11 11856 - 13304 1650 482 aa, chain + ## HITS:1 COG:STM3878 KEGG:ns NR:ns ## COG: STM3878 COG2425 # Protein_GI_number: 16767162 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Salmonella typhimurium LT2 # 9 472 1 464 474 764 83.0 0 MTLDMLNVMLAVSEEGMIEEMLLALLASPQLAVFFEKFPRLKNIIAADIPRWREAVRARL KEVNVPPDLDAEVQTYQQAQLLSTSQFIVQLPQILGKLHQLQSPFAAQAQKLVDDNATFT PALHTLFLQRWRLSLVVQATSLNQQLLDEERDQLLSEVQERMTLSGQLDPVLAENDTAAG RLWDMSAGELKRGDYQLIVRYGDFLNQQPELLQLAEQLGRSREAKSVPKKDAPMETFRSL VREPATVPEQVDGLQQSDDILRLLPPELATLGITELEFEFYRKLVEKQLLTYRLHGDAWR EKITERPVTRQDFDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFIM LFSSEVVHYELTSERGLEQAIRFLSQRFRGGTDLASCFRAIIERLQNPQWVDADAVVISD FIAQRLPDEVIAQVGELQRKHQHRFHAVAMSVHGKPGIMRIFDHIWRFDTGLRSRLLRRW RR >gi|289775432|gb|GG745511.1| GENE 12 13309 - 14301 1075 330 aa, chain - ## HITS:1 COG:ECs4686 KEGG:ns NR:ns ## COG: ECs4686 COG2502 # Protein_GI_number: 15833940 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 598 90.0 1e-171 MKTAYIAKQRQISFVKSHFSRQLEEKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK TLPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLTPIHSVYVDQWDWE RVMGDEERHVGTLKATVEAIYAGIKATELAVSQEFGLKPFLPEQIHFVHSQELLSRYPDL DAKGRERAIAKELGAVFLIGIGGKLSDGKRHDVRAPDYDDWSTEISEGFAGLNGDILVWN PVLEDAFEISSMGIRVDAEALKRQLAVTGDEDRLQLEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLDHIGQVQCGVWPAQVRESVSALL >gi|289775432|gb|GG745511.1| GENE 13 14453 - 14911 667 152 aa, chain + ## HITS:1 COG:STM3876 KEGG:ns NR:ns ## COG: STM3876 COG1522 # Protein_GI_number: 16767160 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 286 97.0 7e-78 MENYQIDNLDRGILDALMANARTAYAELAKQFSVSPGTIHVRVEKMKQAGIITGARIDVS PKQLGYDVGCFIGIILKSAKDYPSALARLESLEEVTEAYYTTGHYSIFIKVMCKSIDALQ QVLINKIQTIDEIQSTETLIVLQNPIMRTIKP >gi|289775432|gb|GG745511.1| GENE 14 15010 - 15450 423 146 aa, chain + ## HITS:1 COG:mioC KEGG:ns NR:ns ## COG: mioC COG0716 # Protein_GI_number: 16131610 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli K12 # 1 146 1 146 147 240 85.0 7e-64 MADITLISGSTLGSAEYVAEHLAEKLEEAGYSTEIQHGPLVDDLQAEGIWLVISSTHGAG DIPDNLVPFYDALLEQKADLSAVRFGAIGIGSREYDTFCGAIDKLEAALKASGAKQIGET LKINVLEHEIPEDPAEIWLGSWKNLL >gi|289775432|gb|GG745511.1| GENE 15 15832 - 17721 2108 629 aa, chain + ## HITS:1 COG:STM3874 KEGG:ns NR:ns ## COG: STM3874 COG0445 # Protein_GI_number: 16767158 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Salmonella typhimurium LT2 # 1 629 1 629 629 1194 95.0 0 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMATAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGSVDQHPRQV PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENARIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPRRDQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTEQGRELGLVDDERWARYNEKLESIERERQRL KSTWVNPQAESAAEVNAHLTAPLSREASGEDLLRRPEMTYEQLIQLSPFAPGLEDQQAAE QVEIQVKYEGYIARQQDEIEKQQRNENTVLPATLDYRQVTGLSNEVIAKLNDHKPSSIGQ ASRISGITPAAISILLVWLKKQGMLRRSA >gi|289775432|gb|GG745511.1| GENE 16 17838 - 18461 881 207 aa, chain + ## HITS:1 COG:ECs4682 KEGG:ns NR:ns ## COG: ECs4682 COG0357 # Protein_GI_number: 15833936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Escherichia coli O157:H7 # 1 203 1 203 207 339 81.0 3e-93 MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIV APYLQGSRFIDVGTGPGLPGIPLAIVRPESHFTLLDSLGKRVRFLRQVQHELKLDNVTPV QSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHLPAANGHFYALKGLAQKDEMENLPEGY GIAEVIELHVPQLEGERHLVVIQPKSR >gi|289775432|gb|GG745511.1| GENE 17 19078 - 19458 315 126 aa, chain + ## HITS:1 COG:STM3872 KEGG:ns NR:ns ## COG: STM3872 COG3312 # Protein_GI_number: 16767156 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 164 87.0 4e-41 MSVSLLSRNVARKLLFIQLLAVIASGLLFSLKDPFWGISAVCGGLAVVLPNLMFMIFAWR HQAHTPAKGRVAWTFAFGEAFKVLLTFALLAMALAVLKVVFMPLIVTWVLVLVVQVLAPA VINNKG >gi|289775432|gb|GG745511.1| GENE 18 19467 - 20282 990 271 aa, chain + ## HITS:1 COG:STM3871 KEGG:ns NR:ns ## COG: STM3871 COG0356 # Protein_GI_number: 16767155 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 458 92.0 1e-129 MASENMTPQEYISHHLNNLQIDLRTFSLVDPHNPPATFWTLNIDSMFFSVVLGLLFLAMF RSVAKKATSGVPGKFQTFIEMIIGFVHGSVKDMYHGKSKVIAPLALTVFVWVFLMNLMDL LPIDLIPYIGEHIFGLPALRVVPSADVNITLSMALGVFILIIFYSIKMKGVGGFVKELTM QPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWVLNVP WAIFHILIITLQAFIFMVLTIVYLSMASEEH >gi|289775432|gb|GG745511.1| GENE 19 20331 - 20570 323 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 97 83.0 5e-21 MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|289775432|gb|GG745511.1| GENE 20 20621 - 21091 508 156 aa, chain + ## HITS:1 COG:STM3869 KEGG:ns NR:ns ## COG: STM3869 COG0711 # Protein_GI_number: 16767153 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Salmonella typhimurium LT2 # 1 156 1 156 156 199 93.0 2e-51 MNMNATILGQAIAFVIFVWFCMKYVWPPLMAAIEKRQKEISDGLASAERAKKDLDLAQAN ATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIDAERKRAREEL RKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL >gi|289775432|gb|GG745511.1| GENE 21 21106 - 21639 608 177 aa, chain + ## HITS:1 COG:STM3868 KEGG:ns NR:ns ## COG: STM3868 COG0712 # Protein_GI_number: 16767152 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Salmonella typhimurium LT2 # 1 177 1 177 177 280 88.0 1e-75 MSEFVTVARPYAKAAFDFAVEHNSVERWQDMLAFAAEVTKNDQMAELLSGALAPETLSEA FIAICGEQLDENGQNLIKVMAENNRLKVLPDVLEQFIHLRAASEAIAEVEVISANQLSDE QLARIVSAMEKRLSRKVKLNCKIDKSVMAGIIIRAGDMVIDGSVRGRLDRLADVLQS >gi|289775432|gb|GG745511.1| GENE 22 21652 - 23193 1482 513 aa, chain + ## HITS:1 COG:ECs4676 KEGG:ns NR:ns ## COG: ECs4676 COG0056 # Protein_GI_number: 15833930 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 973 98.0 0 MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAECMQGEMISLPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGP LENDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTALAI DAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPY AGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER AARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLF NAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQ LDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELAKIGNFEAALLAYVDRDHA PLMQEINQSGGYNDEIEGKLKGILDSFKATQSW >gi|289775432|gb|GG745511.1| GENE 23 23244 - 24107 1043 287 aa, chain + ## HITS:1 COG:STM3866 KEGG:ns NR:ns ## COG: STM3866 COG0224 # Protein_GI_number: 16767150 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 532 96.0 1e-151 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQERMAASRPYADTMRKVIGHLANGN LEYKHPYLEERDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKAWSDKGVQCDLAMIGS KGVSFFNAVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYVVSNKFINTMS QVPTITQLLPLPASEDADLKRKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV >gi|289775432|gb|GG745511.1| GENE 24 24134 - 25516 1389 460 aa, chain + ## HITS:1 COG:STM3865 KEGG:ns NR:ns ## COG: STM3865 COG0055 # Protein_GI_number: 16767149 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 875 98.0 0 MATGKIVQVIGAVVDVEFPQDAVPRVYEALEVQNGKEVLVLEVQQQLGGGIVRTIAMGSS DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEERWAIHRAAPSYEEL SSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVP ADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG VQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVA LKDTIRGFKGIMEGEYDHLPEQAFYMVGSIDEAVEKAKKL >gi|289775432|gb|GG745511.1| GENE 25 25543 - 25956 468 137 aa, chain + ## HITS:1 COG:STM3864 KEGG:ns NR:ns ## COG: STM3864 COG0355 # Protein_GI_number: 16767148 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Salmonella typhimurium LT2 # 1 137 3 139 139 239 99.0 1e-63 MTYHLDVVSAELQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF IYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAEL AKAIAKLRVIELTKKAM >gi|289775432|gb|GG745511.1| GENE 26 26651 - 28021 1586 456 aa, chain + ## HITS:1 COG:ECs4672 KEGG:ns NR:ns ## COG: ECs4672 COG1207 # Protein_GI_number: 15833926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 813 90.0 0 MSNSAMSVVILAAGKGTRMYSDLPKVLHTLAGKPMVQHVIDAANDLGACAVHLVYGHGGD LLRQTLHEDNLNWVLQAEQLGTGHAMQQAAPFFNDDEDILMLYGDVPLISVETLQRLRAA KPQGGIGLLTVKLDDPTGYGRITRENDQVTGIVEHKDASEAQRQIQEINTGILIAGGADL KRWLAKLTNNNAQGEYYITDIIAMAYQEGREIVAVHPQRLSEVEGVNNRLQLARLERVYQ AEQAEKLLLAGVMLRDPARFDLRGTLQHGRDVEIDTNVILEGNVVLGDRVKIGAGCVIKN STIGDDCEISPYSVVEDAQLQAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSK AGHLTYLGDAEIGDNVNIGAGTITCNYDGANKHKTIIGDDVFVGSDTQLVAPVTVGNGVT IAAGTTVTRNIADNELVLSRVPQVHKQGWQRPVKKK >gi|289775432|gb|GG745511.1| GENE 27 28205 - 30034 2650 609 aa, chain + ## HITS:1 COG:STM3861 KEGG:ns NR:ns ## COG: STM3861 COG0449 # Protein_GI_number: 16767145 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Salmonella typhimurium LT2 # 1 609 1 609 609 1118 92.0 0 MCGIVGAVAQRDIAEILLEGLRRLEYRGYDSAGLAVVDSEGHMTRVRRLGKVQMLAQAVE EQPLHGGTGIAHTRWATHGEPSESNAHPHVSEHIVVVHNGIIENHEPLRALLQSRGYVFV TETDTEVIAHLVHWELEQGGTLREAVLRAIPQLRGAYGTVIMDTRDPGTLLAARSGSPLV IGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEVTRRSVVIFDKSGAEVKRQEIESNLQ YDAGDKGIYRHYMQKEIFEQPNAIKNTLTGRISHGEVDLSELGPNANEMLAQVEHIQIVA CGTSYNSGMVSRYWFEALAGVPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAAL RLSKELGYLGSLAICNVPGSSLVRESDLALMTKAGTEIGVASTKAFTTQLTVLLMLVAKL ARLKGQDASIEHDIVHGLQALPNRIEQMLSQDKRIEQLAERFSDKHHALFLGRGDQYPIA MEGALKLKEISYIHAEAYAAGELKHGPLALIDAEMPVIVVAPNNELLEKLKSNIEEVRAR GGELYVFADGEAGFNGSDNMHIIEMPHVEETIAPIFYTVPLQLLAYHVALIKGTDVDQPR NLAKSVTVE >gi|289775432|gb|GG745511.1| GENE 28 30372 - 31412 1157 346 aa, chain + ## HITS:1 COG:pstS KEGG:ns NR:ns ## COG: pstS COG0226 # Protein_GI_number: 16131596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 346 1 346 346 569 89.0 1e-162 MNVMRTTVATVVAATLSMSAFSAFAAASLTGAGATFPAPVYAKWADTYQKETGNKVNYQG IGSSGGVKQIIANTVDFGASDAPLADDKLTQEGLFQFPTVIGGVVLAVNLPGVKSGELVL DGKTLGDIYLGKIKKWDDAAIAKLNPVLKLPSQNIAVVRRADGSGTSFVFTSYLSKVNEE WKSKIGAGSTVNWPTGLGGKGNDGIAAFVQRLPGSIGYVEYAYAKQNNLAYTKLVSADGK PVSPTEDNFANAAKGVDWSKSFAQDLTNQKGENAWPITSTTFILVHKATNKPEQTAEVLK FFDWAYKNGGKEANALDYATLPESVVEQVRAAWKTNVKDSSGKALY >gi|289775432|gb|GG745511.1| GENE 29 31541 - 32500 1482 319 aa, chain + ## HITS:1 COG:STM3856 KEGG:ns NR:ns ## COG: STM3856 COG0573 # Protein_GI_number: 16767140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 319 1 319 319 520 95.0 1e-147 MAATKPAFTPPGKKGDMIFSALVKLAALIVLLMLGGIIVSLIISSWPSIQKFGFAFLWTK EWDAPNEIFGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELSPAWLKRPLGIAIELLA AIPSIVYGMWGLFIFAPLFAIYFQEPVGNVLSTIPFVGALFAGPAFGIGILAAGVILAIM IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG ETMAVTFIIGNTYQLDSISLYMPGNSITSALANEFAEAETGLHVAALMELGLILFVITFI VLAASKFMIMRLAKNEGAR >gi|289775432|gb|GG745511.1| GENE 30 32500 - 33390 1351 296 aa, chain + ## HITS:1 COG:STM3855 KEGG:ns NR:ns ## COG: STM3855 COG0581 # Protein_GI_number: 16767139 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 486 94.0 1e-137 MATIELQTSTELAESRRKMQAKRRMKNRIALALSMATMAFGLFWLIWILMATITRGFDGM SLALFTEMTPPPNTAGGGLANALAGSGLLILWATVFGTPLGILAGIYLAEYGRKSVLAEI IRFINDILLSAPSIVVGLFVYTIVVAQMQHFSGWAGVIALALLQVPIVIRTTENMLKLVP DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWST DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKHG >gi|289775432|gb|GG745511.1| GENE 31 33438 - 34211 200 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 246 7 237 318 81 27 5e-14 MSMVNTAPGKISVRNLNFYYGKFHALKNINLDITKNQVTAFIGPSGCGKSTLLRTFNKMF ELYPEQRAEGEILLDGDNILTNTQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEK LSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP CSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLF TKPAKKQTEDYITGRYG >gi|289775432|gb|GG745511.1| GENE 32 34262 - 34987 1052 241 aa, chain + ## HITS:1 COG:STM3853 KEGG:ns NR:ns ## COG: STM3853 COG0704 # Protein_GI_number: 16767137 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 444 97.0 1e-124 MDNLNLNKHISGQFNAELEYIRTQVMTMGGLVEQQLSDAITAMHNQDSDLAKRVIDGDKQ VNMMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTIAELERIGDVADKICRTALEKFSQQ HQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDSRTIPSVLTALFCARSIERIGDRCQNICEYIFYFVKGQDFRHVGGDELDKLLAGKDPK E >gi|289775432|gb|GG745511.1| GENE 33 35473 - 37104 1720 543 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 2 543 3 538 538 790 76.0 0 MRKNRIASAIVLLAPLCYSTTLIASPLTVEQRLELLEKALKDTQKELKKYQDQERKRDQI WASWSPPAEGQKRKTGVAAAGPKTAVKPDAVLVKNQQPATDGAPAYSAMTLKDFSTFVKD EIGFSYNGYFRSGWGTASHGSPKSWAIGSLGRLGNEYSGWFDLQLKQRVFQEGDKRVDAI VMLDGNVGQQYSSGWFGDNAGGENYIQFSDMYVNTKGFLPFAPEADFWVGKHGAPKIEIQ MLDWKTQRTDAAAGVGLENWQVGAGKFDIALVREDVDDYDRSLSNKQQINTNTLDVRYKE IPLWDKASLMVSGRYVAANQSSSEKYKEGNEGYYPWKDTWMAGTSLTQKWANGGFNEFSF LLANNSIASSFSRYAGSSPYTTFNGRYYGDHTNGTAVRLTSQGETYLRDDVIMANAIVYS FGNDVYSYETGAHSDFESIRTVLRPAYIWDKYNQTGVELGYFKQQNKDVTGKKYNESGYK TTLFHTFKVNTSMLTSRPEIRFYATYIKAKDIDLDKAANNTTSIFEDGKNDQFAVGAQAE IWW >gi|289775432|gb|GG745511.1| GENE 34 37143 - 38309 1590 388 aa, chain + ## HITS:1 COG:yieL KEGG:ns NR:ns ## COG: yieL COG2382 # Protein_GI_number: 16131587 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli K12 # 1 388 14 400 400 558 71.0 1e-159 MKRHAMYFALALAGAAFTLQAAPLPAMPDPTLPVSHFITQVNADKSITYRLFAPDARRVS VVTGATPDSFVSHDMTKEAQGVWTWKSEPMKPNLYEYYFDVDGFRSVDTGSRYQKPQRQV NTSLILVPGSILDDRAVAHGDLRTLTYHSKALNAERRLYVWTPPGYSGTGDPLPVLYFYH GFGDSGLSAIDQGRIPQIMDNLLAEGKIKPMLVVVPDTETDTPEAIAENFPPQERRKNFY PLNAQAADNELMQDIIPLIDTRFNVRKDADGRALAGLSQGGYQALVSGMNHLDSFGWLAT FSGVTTTTVPNAGVEAQLKQPDAINKQLRNFTVVVGEKDSVTGNDIAGLKRELEKQKINF DYHSYPGLNHEMDVWRPAYAEFVQKLFK >gi|289775432|gb|GG745511.1| GENE 35 38360 - 39079 713 239 aa, chain + ## HITS:1 COG:yieK KEGG:ns NR:ns ## COG: yieK COG0363 # Protein_GI_number: 16131586 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 24 232 1 209 213 331 74.0 6e-91 MKMIVTEDYEEMSLVASHHVLGYITAPRRVNLAVTAGSTPKRMYEHLTAAVKGKAFYDRV HYYNFDEIPFRGQSREGVTISNLRQLFFTPAQIKEENIHKLTLDNAAQHDRQLEEAGGLD LMVLGLGADGHFCGNLPNTTRFHDQTVEVPIHGEMIGIVANGEMGGDFSVVPDSYVTMGP RSVMAAKNLLLIVSGAAKAQALKQVVEGPVSEQVPASVLKLHPSLVIIADKAAVTELQP >gi|289775432|gb|GG745511.1| GENE 36 39159 - 39824 787 221 aa, chain - ## HITS:1 COG:STM3852 KEGG:ns NR:ns ## COG: STM3852 COG0637 # Protein_GI_number: 16767136 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 395 80.0 1e-110 MTQPEAVFFDCDGTLVDSEVICSRAYVHMFQEFGITLDLAEIFKRFKGVKLYEIIDTINA EHGVNLQKATLEPIYRAEVARLFDSELEVIAGAQALLDAVSVPMCVVSNGPVSKMQHSLG RTGLLHHFADRLYSGYDIQRWKPDPALMFHAAEAMQVKAENCILVDDSSAGAQSGIAAGM EVFYFCADPHNQPIDHPKVTTFTDLAELPALWQARGWDITR >gi|289775432|gb|GG745511.1| GENE 37 39995 - 41332 1912 445 aa, chain + ## HITS:1 COG:STM3851 KEGG:ns NR:ns ## COG: STM3851 COG2252 # Protein_GI_number: 16767135 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 445 43 487 487 712 94.0 0 MSQQQTSQSSGQGLLERVFKLREHGTTVRTEAIAGFTTFLTMVYIVFVNPQILGVAGMDT SAVFVTTCLIAAFGSILMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWG AVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGHL TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYTGIVSAPPSVTSVI GHVDLAGSLNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADAQGKFPRMKQALFVDSV SSVAGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGILFLLVIFLSPLAGMVPAYAAAG ALIYVGVLMTSSLARVKWDDLTEAVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR LRELSPCVIIVSLLFVLKIVFIDAH >gi|289775432|gb|GG745511.1| GENE 38 41378 - 41944 735 188 aa, chain - ## HITS:1 COG:STM3850 KEGG:ns NR:ns ## COG: STM3850 COG0431 # Protein_GI_number: 16767134 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Salmonella typhimurium LT2 # 1 188 7 194 194 330 87.0 6e-91 MSDTLKVVTLLGSLRKGSFNGMVARTLPGIAPAGMDISALPSIGDIPLYDADMQEEEGFP QRVQDIAQQIREADGVVIVTPEYNYSVPGGLKNAIDWLSRLPEQPLSGKPVLIQTSSMGA IGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQSGEVVDQSTLDHLRGQLTAFG DYIRRVKA >gi|289775432|gb|GG745511.1| GENE 39 41981 - 42703 442 240 aa, chain - ## HITS:1 COG:STM3849 KEGG:ns NR:ns ## COG: STM3849 COG2091 # Protein_GI_number: 16767133 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Salmonella typhimurium LT2 # 1 240 1 249 251 304 62.0 9e-83 MATHFARGILSTGEPLSTRLSAACHQSARLLPEYRQARFRASRSLLAELLFMLYGISELP EIINEANGRPVFSDRHLPRFSISYTGNIVGVALTTEGDCGLDMELQRSVRGHDADRHNFS NNENLWINIQHDPDEARSQLVALRRSVLKLTGEASTQLLPGSGRLRTAGSQPIEAVCDAE SLLVWSIAASPNIGSLKVWEYDAKGGEWRSLPDAQQRAREPSARLMRFTSLPMEKTLSLN >gi|289775432|gb|GG745511.1| GENE 40 42860 - 43819 1210 319 aa, chain - ## HITS:1 COG:STM3848 KEGG:ns NR:ns ## COG: STM3848 COG0583 # Protein_GI_number: 16767132 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 21 314 21 314 319 479 80.0 1e-135 MKKPLSSLDLNLLLCLQLLTQELSVTRTAKRMNVSPSAVSKSLAKLRAWFDDPLFVKTPL GLAPTPLVSSMEQDLADWMQMGNQILDKPHHTMPSGLKFELAAETPLLMILFNTLSQRIY QRYPQALIRLRNWDYDSLDAIIRGEVDIGFCGRESHPQSRELLSLLPWYIDFEVLFTDLP QVWLRADHPALREEWDLAAFLRYPHITICWEQRDTWALDDVLQELGYKRNVALTVPGFEQ SLFMAAQPQHTMLATAPRYCQHYNQQHQLPLVSRPLPLEAQHLEKLRVPFTLLWHKRNSY NPKLVWLRDTLKALYSGTL >gi|289775432|gb|GG745511.1| GENE 41 43794 - 44972 1279 392 aa, chain - ## HITS:1 COG:STM3847 KEGG:ns NR:ns ## COG: STM3847 COG0477 # Protein_GI_number: 16767131 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 392 1 393 395 501 74.0 1e-141 MTRFLLCSFALVLLYPSGIDMYLVGLPRIAQDLGASEAQLHIAFSVYLAGMASAMLFAGR IADRSGRKPVAIVGAVIFVVASLLCAQAHASSHFLAGRFIQGIGAGSCYVVAFAILRDTL DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKYPWQSLFYTMTGMGVMVGLLSVFILRE TRPTAPPQTATPQHGGSESLLNRFFLSRILITTLSVTAILTYVNVSPVLMMEEMGFDRGT YSMAMALMAMISMAVSFSTPFALSLFTPRTLMLTSQVLFLAAGLALSLATRQTLTLIGLG MICAGFSVGFGVAMSQALGPFTLRAGVASSVLGIAQVCGSSLWIWLAAIIGLSAMNMLIG ILIACSIVSLVLLLVVTPPRVAQYDEEAAVES >gi|289775432|gb|GG745511.1| GENE 42 45072 - 45491 575 139 aa, chain - ## HITS:1 COG:SA2161 KEGG:ns NR:ns ## COG: SA2161 COG0454 # Protein_GI_number: 15927951 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 7 130 4 129 133 115 42.0 3e-26 MTVEYTVIEKVPSAEAFCHLRVAAGMSPRPLEGARAGLPRSCYGVHILWQETPIAMGRIV GDGAINFDIVDVAVDPAHQGKGLGRLVMEKLIAWLDANAFDGAYVTLVADVPELYAKFGF ESVRPESEGMARVWRTRSR >gi|289775432|gb|GG745511.1| GENE 43 45611 - 46975 1796 454 aa, chain - ## HITS:1 COG:STM3843 KEGG:ns NR:ns ## COG: STM3843 COG0486 # Protein_GI_number: 16767128 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Salmonella typhimurium LT2 # 1 454 1 454 454 830 95.0 0 MSHNDTIVAQATPPGRGGVGILRISGLKARDVAQAVLGKLPKPRYADYLPFNDVDGTPLD QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE IDFLSDGKIEAQLNGVMADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL FMVDGTTTSAVDPAEIWPDFIERLPAKLPITVVRNKADVTGEALGLSEVNGHSLIRLSAR TGEGVEVLRNHLKQSMGFDTSMEGGFLARRRHLQALEEAANHLQQGKAQLLGAWAGELLA EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK >gi|289775432|gb|GG745511.1| GENE 44 47098 - 48744 1883 548 aa, chain - ## HITS:1 COG:STM3842 KEGG:ns NR:ns ## COG: STM3842 COG0706 # Protein_GI_number: 16767127 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Salmonella typhimurium LT2 # 1 548 1 548 548 951 87.0 0 MDSQRNLLIIALLFVSFMIWQAWEQDKNPQPQQQTTQTTTTAAGSAADQGVPASGQGKLI TVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLLETTPQFVYQAQSGLTGRDGPD NPANGPRPLYSVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLKRGGYAVNVGYSVQ NASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSDTKYEKYKFDTILD NENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNNFYTANLGNGIVAIGYKSQPVLVQPGQT DKLQSVLWVGPAIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIV ITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRQSQEMMALYKAEKVNPL GGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLSAQDPYYILPIIMGATMFFIQK MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYRGLEKRGL HSREKKKS >gi|289775432|gb|GG745511.1| GENE 45 48968 - 49294 137 108 aa, chain - ## HITS:1 COG:STM3840 KEGG:ns NR:ns ## COG: STM3840 COG0594 # Protein_GI_number: 16767125 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Salmonella typhimurium LT2 # 1 108 12 119 119 187 95.0 5e-48 MLTPSHFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRE SFRLRQHELPPMDFVVVAKRGVADLDNRALSEALEKLWRRHCRLARGS >gi|289775432|gb|GG745511.1| GENE 46 49343 - 49483 228 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 [Escherichia coli O157:H7 EDL933] # 1 46 1 46 46 92 100 3e-17 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK >gi|289775432|gb|GG745511.1| GENE 47 50174 - 51508 1567 444 aa, chain + ## HITS:1 COG:STM3838 KEGG:ns NR:ns ## COG: STM3838 COG0593 # Protein_GI_number: 16767123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Salmonella typhimurium LT2 # 1 444 24 466 466 827 93.0 0 MWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLNDFCGADAPQLRFEVGAKPA SSLQKGAVSPAAAAIPAAQVQTARVAPTIVRPGWDNVPAPAEPTYRSNVNVKHTFDNFVE GKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIVARKPNAKVVYMHS ERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQ IILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAF FIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTV AEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRK IEQLREESHDIKEDFSNLIRTLSS >gi|289775432|gb|GG745511.1| GENE 48 51513 - 52613 1235 366 aa, chain + ## HITS:1 COG:STM3837 KEGG:ns NR:ns ## COG: STM3837 COG0592 # Protein_GI_number: 16767122 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 707 96.0 0 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGALSLTGTDLEMEMVARVALV QPHEAGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGSELRTVATDGHRLAVC SMPLEASLPNHSVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFIFTSKLVDGR FPDYRRVLPKNPDKHLDAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE EAEEILDVTYAGTEMEIGFNVSYVLDVLNALKCENVRILLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|289775432|gb|GG745511.1| GENE 49 52760 - 53833 904 357 aa, chain + ## HITS:1 COG:STM3836 KEGG:ns NR:ns ## COG: STM3836 COG1195 # Protein_GI_number: 16767121 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Salmonella typhimurium LT2 # 1 357 1 357 357 681 94.0 0 MSLTRLLIKDFRNIESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE GFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLVKQRNAALRQVSRYAQLRPWDLE LIPLAEQISRWRAEYSAAIVEDMADTCQQFLPEFTLTFSFQRGWEKETDYAEVLERNFER DRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRVSGRRCLYL IDDFASELDDARRGLLSSRLKATQSQVFVSAISAEHVMDMSDKNSKMFRVEKGKITD >gi|289775432|gb|GG745511.1| GENE 50 53862 - 56282 3660 806 aa, chain + ## HITS:1 COG:STM3835 KEGG:ns NR:ns ## COG: STM3835 COG0187 # Protein_GI_number: 16767120 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Salmonella typhimurium LT2 # 1 806 1 804 804 1523 94.0 0 MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIV VTIHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSQKLELVIQRDNKVHKQIYVHGVPQAPLAVTGETDKTGTMVRFWPSHETFTNVT EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG KQEQYIKDDEAMDQYQIAIALDGATLHTNANANAPALAGEPLEKLVAEFNATQKMIGRME RRFPKAMLKELIYQPTLTEADLADEQKVTRWVNTLVSELNEKEQHGSQWKFDVRENSELQ QFEPIIRVRTHGVDTDYPLDNEFIMGPEYRRICTLGEKLRGLMEEDAYIERGERRQPVAS FEQALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFT TLMGDAVEPRRAFIEENALKAANIDI >gi|289775432|gb|GG745511.1| GENE 51 56483 - 57295 1172 270 aa, chain + ## HITS:1 COG:STM3831 KEGG:ns NR:ns ## COG: STM3831 COG0561 # Protein_GI_number: 16767116 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 269 1 269 281 497 92.0 1e-141 MAIKLIAIDMDGTLLLPDHTISPAVKAAIAAARERGVNVVLTTGRPYAGVHSYLKELHME QPGDYCITYNGALVQKAGDGSTVAQTALSYDDYRFLEQLSREVGSHFHALDRNTLYTANR DISYYTVHESYVATIPLVFCEAEKMDPEIQLLKVMMIDEPAILDKAIARIPAEVKEKYTV LKSAPYFLEILDKRVNKGTGVKSLADALGIKPEEIMAIGDQENDIAMIEFAGVGVAMDNA IPAVKEAANFITKSNLEDGVAFAIEKYVLA >gi|289775432|gb|GG745511.1| GENE 52 57445 - 58527 1169 360 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0010 NR:ns ## KEGG: Kvar_0010 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 8 360 1 353 353 721 99.0 0 MNIYHRLMLVALPFASVQICVAAEPTAPLEPVYAYHGAEPADLSAPVKTETAVAEPTAIL PFLGDEARKRGYVLPLPFGVSMNYMDMRQNINVDSINFTGLSLHGRNIDCGKDPVCKHAV NNIFANGPVSLDNAFQIGVGNTRESSKTETLKLDAWLLPFMNVYGLVGHTEGHSISQIAV GLKGPNGKVVPLPGMQDLDFRLDFKGTTYGMGTTLVGGVGNWFTVLDANYTQTRFDILDG SIDAFTFSPRVGYRFTTPSVDTLHLPAGKLNLWVGSMYQDVQQEFKGSLNDLSMPSPMLQ NMVNLANQDNNGRFDVKQHLQSPWNVLVGAQYELTQHFNITTEFGFAERNSFFIAGEYRF >gi|289775432|gb|GG745511.1| GENE 53 58524 - 59657 1306 377 aa, chain + ## HITS:1 COG:no KEGG:KPK_0007 NR:ns ## KEGG: KPK_0007 # Name: not_defined # Def: outer membrane protein, OMP85 family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 377 1 377 377 758 99.0 0 MSRLFILFLLLLTYPICSQAETLSREKIDGWLQHLGASDKFDASKGIDWGVMPGPFYTPE LGLGIGTAVVGMYRPDPQDTTSQNSTLTLSGYASSTGAFGLSVKNYAFFDNDLWRVFVEG SMANTPTYYWGQGFHAGDKDNEKEKYTAQVLTLRPTIYRQLIDNVYLGAGWSLAAQNADE MDHDDLPKIESTPQGPSVFSSGASIDINWDDRDFVPNPRRGQYANFRYTHYAPGLGSDTR FDEFQLHYSHYHALSEKSVLAWEADGAFTQGDVPWSMMPLLGSDERMRGYYQGRYRDKNV VSSQLEYRRQLTWRHGIVAWVGAGTMGPSLSSLNNGRWLPTGGVGYRFEFKPRVNIRLDY GIGKGSSGFYFQVGEAF >gi|289775432|gb|GG745511.1| GENE 54 59735 - 60961 1044 408 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0012 NR:ns ## KEGG: Kvar_0012 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 408 14 421 421 809 99.0 0 MKQVTFAPRNHQLTNTRTWTPDSQWLVFDVRPSGASFTGETIERVNVNSGTVETVYHATQ GARVGVVTVHPTQERYVFIHGPEQPDAQWQYDFHHRRGVVAFQGAVENLDAMDITAPYTP GALRGGSHVHVYSPNGQFVSFTYNDHVLHERDPALDLRNVGVAAPYGPVTPQGKHPREYS GSHWCVLVSRTTPTPVPGSDEINRAYEEGWVGNHALAFIGDTLAENGDKVPELFIVDLPQ DEAGWKQPGGAPLAGTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAI AFLMRDDAGVVQLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLEDRIACCHAG TGDITFLTKVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVTQTGR >gi|289775432|gb|GG745511.1| GENE 55 60963 - 61295 310 110 aa, chain - ## HITS:1 COG:ECs4628 KEGG:ns NR:ns ## COG: ECs4628 COG5645 # Protein_GI_number: 15833882 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 6 108 31 133 135 148 72.0 3e-36 MKSRRLLKLVLFSGIISLSGCSSVMSHTGGKEGTYPGTRSSAQTLGDSDTNWGVKSLVAL DMPFTAVMDTLLLPWDMFRTDSSIKSRVEKSEKATLATNSVIPPAPMPAQ >gi|289775432|gb|GG745511.1| GENE 56 61609 - 62022 728 137 aa, chain + ## HITS:1 COG:STM3809 KEGG:ns NR:ns ## COG: STM3809 COG0071 # Protein_GI_number: 16767094 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Salmonella typhimurium LT2 # 1 137 1 137 137 248 97.0 2e-66 MRNFDLSPLYRSAIGFDRLFNLLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESE LEITAQDNLLIVKGAHAAEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYID LERVIPEANKPRRIEIN >gi|289775432|gb|GG745511.1| GENE 57 62139 - 62567 835 142 aa, chain + ## HITS:1 COG:STM3808 KEGG:ns NR:ns ## COG: STM3808 COG0071 # Protein_GI_number: 16767093 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Salmonella typhimurium LT2 # 1 142 1 142 142 252 90.0 1e-67 MRNYDLSPLLRQWIGFDKLANALQTAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLD IQLEGTRLVVKGTPQQPEKETTWLHQGLVSQAFSLSFTLADNMEVSGATFTNGLLHIDLT RNEPEQIAPQRIAISERPALNS >gi|289775432|gb|GG745511.1| GENE 58 62713 - 64374 2240 553 aa, chain + ## HITS:1 COG:STM3807 KEGG:ns NR:ns ## COG: STM3807 COG2985 # Protein_GI_number: 16767092 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 552 1 552 553 884 88.0 0 MSEIALTVSVLALVAVVGLWIGNVKIRGVGFGIGGVLFGGIIVGHFVDQAGVALSSPMLH FIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAILIVILGGLVTAVLHKLFNIPLP VVLGIFSGAVTNTPALGAGQQILRDLGVPFEVVDQMGMSYAMAYPFGICGILLTMWLVRL FFRINVEKEAQRFEESSGNGHANLHTINVRVENPNLNQMAIQDVPMLNSDNIVCSRLKRG ELLMVPAPGTLIQAGDLLHLVGRPEDLHNAQLVIGQEVATSLSTRGTDLKVERVVVTNEK VLGKKIRDLHVKQRYDVVISRLNRAGVELVASSSASLQFGDILNLVGRQEAIDAVAAELG NAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKLGLAGGPLIMALILGRIGSIG KLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVATLTQGEGLSWIAYGIFITAIPLLT VGILARMLAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRII TPQLLAVLFWGLS >gi|289775432|gb|GG745511.1| GENE 59 64342 - 65088 975 248 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 234 1 234 238 380 80.0 1e-105 MIYKSIADRLRLRLNSADFAIGSPLPGEKKLAEEFGVARMTIRKAIDLLVDWGLVVRRHG SGTFVARKDVHHETSNLTGLAEVLRKQGKEVVSQVLAFEVMPAPPAIASLLRIKIDERIY FSRRVRYVDGKPLMLEDSYMPVKLFRNLSLSHLEGSKFDYIEKECGIIISGNYETLTPVL ADKQLARSMNVPEQTPLLRITSLSYSDSGEFLNYSVMFRNASEYQVDYHLRRVQAQSPLA QPPEQHGE >gi|289775432|gb|GG745511.1| GENE 60 65387 - 67009 2142 540 aa, chain + ## HITS:1 COG:ECs4623_1 KEGG:ns NR:ns ## COG: ECs4623_1 COG1263 # Protein_GI_number: 15833877 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 1 440 88 527 527 740 85.0 0 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPMFVGEALTAPDSLFAQIVHIIEEGG WTVFRNMPLIFAVGLPIGLAKQAQGRACLAVLVSFLTWNYFINAMGMTWGHFFGVDFSVE PTAGSGLTMIAGIKTLDTSIIGAIVISGLVTALHNRYFDKPLPVFLGIFQGSSFVVIVAF LAMIPCAWLTLLGWPKVQLGIESLQAFLRSAGALGVWVYIFLERILIPTGLHHFVYGPFI FGPAVVEGGLQVYWAEHLQAFSQSTEPLKTLFPEGGFALHGNSKVFGSVGIALALYFTAA PENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAATMATVMYICGVVG NFGGGLLDQFLPQNWIPMFHHHASMMFIQIGIGLCFTALYFVVFRTLILRLNLKTPGREE SEIKLYSKADYQAARGKTTAAAAPETRLGQAAGFLQALGGADNIESINNCATRLRIALVD MAKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLENLMKDSLSTEHTTMTEAVS >gi|289775432|gb|GG745511.1| GENE 61 67006 - 68328 1799 440 aa, chain + ## HITS:1 COG:Z5177 KEGG:ns NR:ns ## COG: Z5177 COG1486 # Protein_GI_number: 15804281 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 439 1 439 440 830 88.0 0 MKKFSVVIAGGGSTFTPGIVLMLLANQDRFPLRSLKFYDNDGARQETIAEACKVILKEQA PEIEFSYTTDPQAAFTDVDFVMAHIRVGKYPMREQDEKIPLRHGVLGQETCGPGGIAYGM RSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNAKILNICDMPIGIEGRMA QIVGLKDRKQMRVRYYGLNHFGWWTSIEDLDGNDLMPKLREYVAKYGYVPPSNDPHTEAS WNDTFAKAKDVQALDPQTMPNTYLKYYLFPDYVVAHSNPERTRANEVMDHREKNVFSACR AIIAAGKSTAGDLEIDEHASYIVDLATAIAFNTQERMLLIVPNNGAIHNFDADAMVEIPC LVGHNGPEPLTVGDIPHFQKGMMSQQVAVEKLVVDAWEQRSYHKLWQAITLSKTVPSASV AKAILDDLIAANKDYWPELH >gi|289775432|gb|GG745511.1| GENE 62 68429 - 68776 560 115 aa, chain + ## HITS:1 COG:STM3805 KEGG:ns NR:ns ## COG: STM3805 COG2149 # Protein_GI_number: 16767091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 166 83.0 6e-42 MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPLIREILALLLC LFAGGMAIYGYLRWLNNEKAMRLKQDLPYTRTLLVISILLLAVVAAVMLLVVYGG >gi|289775432|gb|GG745511.1| GENE 63 68766 - 69128 254 120 aa, chain + ## HITS:1 COG:no KEGG:KPK_0017 NR:ns ## KEGG: KPK_0017 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 120 1 120 120 220 100.0 1e-56 MADKRRARREGDPGLQPERTSLAWFRTLLGYGALMALAIKHSWHRAGLPFWLSIGVLAIV AVILWGYTRRRHLMDVDDSDFLQPRAVRDKFLIALAVLSLAFLFAVTHLQPIVLFIRDMS >gi|289775432|gb|GG745511.1| GENE 64 69125 - 69625 485 166 aa, chain + ## HITS:1 COG:yidF KEGG:ns NR:ns ## COG: yidF COG0641 # Protein_GI_number: 16131544 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 25 166 16 165 165 125 45.0 5e-29 MTGCPANLPLTHAPGQQHDTPFQAVVVEAHHCHQPQAFYAQLRQQGLTAIHFIPQLAAGD AALWGEFLCAVFHRWVREDIGRINILLFSETLSAWCGETLTQPGAPAANSTCYGCPWLRL CRCGEQEDPLCAGYRQFYDLSGPYMRVMRDLRRQQRPPEALMPLLR >gi|289775432|gb|GG745511.1| GENE 65 69629 - 70957 1640 442 aa, chain - ## HITS:1 COG:ECs3245 KEGG:ns NR:ns ## COG: ECs3245 COG3048 # Protein_GI_number: 15832499 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli O157:H7 # 1 442 1 442 442 759 85.0 0 MKNADLTQLTATFPLVQDLIALKETTWFNPATTTLAQGLPYVGLTADDVQDAHARLQRFA PYLAEAFPETAASGGIIESEVVAIPAMKRSLEQKFGQPISGDLLLKKDSHLPISGSIKAR GGIYEVLTHAEKLALEAGLLTTADDYRKLLTPEFKQFFSQYSIAVGSTGNLGMSIGIMSA RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEEDYGVAVEQGRKAAESDPNCFFIDDEN SRTLFLGYAVAGERLKAQFAKAGRVVDADHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH CLFAEPTHSPCMLLGVYTGLHDQIAVQDLGIDNLTAADGLAVGRASGFVGRAMERLLDGL YTLDDQTMYDMLGWLAKAENIRLEPSALAGMAGPQRVCASQAYHQLQGLSEQQLEQATHL VWATGGGMVPEEEMAQYLAKGR >gi|289775432|gb|GG745511.1| GENE 66 70974 - 72311 1869 445 aa, chain - ## HITS:1 COG:STM3801 KEGG:ns NR:ns ## COG: STM3801 COG2610 # Protein_GI_number: 16767087 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 445 1 445 445 660 92.0 0 MESQIWVVSTLLISIVLIVLTIVKLKFHPFLALLLASFFVGAMMGMGPLEMVNAIESGIG GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV GVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKLGADIGTVIV YGLLVGLIASLVGGPLFLRLLGNRLPFKPVPAEFSNLDVREESTLPSLGATLFTVLLPIG LMLVKTVAELNMAQGGTLYTVLEFIGNPITAMFIAVFVAYYILGIRRQMGMGVLLTHTEN GFGSIANILLIIGAGGAFNAILKSSGLADSLAVILSNLHMHPILLAWLVALILHAAVGSA TVAMMGATAIVAPMQPLYPGVSPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGASLSETF KYYTTATFIASLLALAATFLLSFII >gi|289775432|gb|GG745511.1| GENE 67 72536 - 73459 1046 307 aa, chain + ## HITS:1 COG:STM3800 KEGG:ns NR:ns ## COG: STM3800 COG0583 # Protein_GI_number: 16767086 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 304 1 304 307 541 85.0 1e-154 MDVLKTLGTRLLNGWQLSRLSTFEVAARHESFALAADELALTPSAVSHRINQLEEELGIQ LFVRSHRKVELTREGKRVYWALKSSLDGLNQEILDIKNQELSGSLTVYSRPSIAQCWLVP ALGDFTHRYPAISLTVLTGNDNVNLQRAGIDLAIYFDDAPSSQLSHHFLMDEAIVPVCTP NYARQLQLTSNPASLRHCTLLHDRQAWSNDSGTDEWFSWAQQFGIELPQSSGIGFDRSDL AVIAAMNHVGVAMGRKRLVQKRLESGELIAPFGDMTLKCHQHYYVTTLPGRQWPKIDAFI EWLHSLT >gi|289775432|gb|GG745511.1| GENE 68 73587 - 74738 1872 383 aa, chain - ## HITS:1 COG:STM3798 KEGG:ns NR:ns ## COG: STM3798 COG0477 # Protein_GI_number: 16767084 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 9 383 20 394 394 555 90.0 1e-158 MLVLLVAVGQMAQTIYIPAIADMAVALNVREGAVQSVMAAYLLTYGISQLFYGPLSDRVG RRPVILVGMSIFMLATLVAITTHSLPVLIAASAMQGMGTGVGGVMARTLPRDLYEGAQLR HANSLLNMGILVSPLIAPLLGGILDTLWSWRTCYAFLLVLCAGVTFSMAKWMPETRPEGA PRTKLLTSYKTLFGTGAFNCYLLMLIGGLAGIAVFEACSGVLMGAVLGLSSMAVSILFIL PIPAAFFGAWFAGRPNKRFPTLMWQSVICCLLAGLMMWIPGLLGIMTVWTLLVPAALFFF GAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLAWLSAMMPQTGQGSLGLLMML MGLLILLCWLPLASRFTHHQQPV >gi|289775432|gb|GG745511.1| GENE 69 74947 - 75780 1204 277 aa, chain - ## HITS:1 COG:STM3796A KEGG:ns NR:ns ## COG: STM3796A COG0697 # Protein_GI_number: 16767083 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 277 10 286 286 373 81.0 1e-103 MTLTVFCILLFAALLHASWNAIVKASGDKMYAAIGVSGSAALIALVMLPFAPQPALASAP YLLASCALQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVAAISVIFLGDRLSPLAWLGI GVICLAILAMAFHGRVSSRKGIVLALINACFIAGYTLVDGTGVRLAGSALGYTLWTFFMN GFCLLCWAMVARRREASRYLRQHWKKGILGGVGTMGSYGLALWAMTQAPLAVVAALRETS ILFGALIAFIVLKEQLMPLRIVAACGIAAGAILLRLA >gi|289775432|gb|GG745511.1| GENE 70 75849 - 76295 444 148 aa, chain - ## HITS:1 COG:mll2713 KEGG:ns NR:ns ## COG: mll2713 COG0454 # Protein_GI_number: 13472423 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Mesorhizobium loti # 11 144 55 188 194 125 47.0 2e-29 MPPLLITTTTPDDPGFVALRTESLEQHFNMLRRLAENWQSGKNRFNAPGETLLGAFVNHQ LVGVCGINSDPFSPQPRVGRIRHLYISERYRRRGIGQQLLVSVITHSSAWFDFLNTHAPA QAWPFYERLGFRPVYDEPRVTHRLFCSL >gi|289775432|gb|GG745511.1| GENE 71 76386 - 76475 89 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGGMDIIILILKLMVAVLQLLDAVLKQFR >gi|289775432|gb|GG745511.1| GENE 72 77338 - 79026 2121 562 aa, chain + ## HITS:1 COG:STM3796 KEGG:ns NR:ns ## COG: STM3796 COG0028 # Protein_GI_number: 16767080 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Salmonella typhimurium LT2 # 1 562 1 562 562 996 89.0 0 MASSGTTSNTMRFTGAQLVVHLLERQGITMVSGIPGGSILPIYDALSQSTQIRHILARHE QGAGFIAQGMARTEGKPAVCMACSGPGATNLITAIADARLDSIPLVCITGQVPASMIGTD AFQEVDTYGISIPITKHNYLVRDIAELPQVMSDAFRIAQSGRPGPVWIDIPKDVQAATIE LETLPEPGERAPAPAFAPESVREAAAMINAAKRPVLYLGGGVINAPQPIRDLAEKANLPT TMTLMALGMLPKAHPLSLGMLGMHGARSTNFILQEADLLIVLGARFDDRAIGKTEQFCPN AKIIHVDIDRSELGKIKQPHVAIQGDVAEVLAQLIPQIEAQPRDEWRQLVADLQREFPCA IPQESDPLSHYGLINAVAACVDDEAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMG FGLPAAIGAALANPQRKVICFSGDGSLMMNIQEMATAAENQLDVKIILLNNEALGLVHQQ QSLFYQQGVFAATYPGMINFMQIAAGFGLQTCDLNNEADPQAALQAIIDRPGPALIHVRI DAQQKVYPMVPPGAANTEMVGE >gi|289775432|gb|GG745511.1| GENE 73 79030 - 79317 403 95 aa, chain + ## HITS:1 COG:STM3795 KEGG:ns NR:ns ## COG: STM3795 COG0440 # Protein_GI_number: 16767079 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Salmonella typhimurium LT2 # 1 95 1 96 96 172 91.0 1e-43 MQKQCDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQGSEHSRIWLLVNDDQR LGQMISQIEKLEDVTKVARNQSDPTMFNKIAVFFE >gi|289775432|gb|GG745511.1| GENE 74 79470 - 80063 802 197 aa, chain + ## HITS:1 COG:ECs4606 KEGG:ns NR:ns ## COG: ECs4606 COG2197 # Protein_GI_number: 15833860 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 358 94.0 5e-99 MTTIALIDDHLIVRSGFAQLLGLEADFQVVAEFGSGREALAGLPGRGVQVCICDISMPDI SGLELLSQLPKGMATIMLSVHDSPALIEQALNAGARGFLSKRCSPDELIAAVRTVAAGGC YLTPDIAMKLAAGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLLEKL GVSNDVELARRMFDSWQ >gi|289775432|gb|GG745511.1| GENE 75 80081 - 81565 1837 494 aa, chain + ## HITS:1 COG:STM3789 KEGG:ns NR:ns ## COG: STM3789 COG3851 # Protein_GI_number: 16767073 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Salmonella typhimurium LT2 # 1 493 8 499 500 719 86.0 0 MLSVIGCAFIFAAAWFCLWSISLHLVERADLAVLLFPFGLRLGLMLQCPRGYWPVLLGAE WLLIFWLAQEVALAHPIILMTGSLLTLLPVALISRYRQQRDWLTLLRQGGALIAASLLQS LPWLAQEGSEGLTALLLTLTGGLTLAPTCLVIWHYLTSTVWRPLGPALVSQPINWRGRHL IWYLLLFTISLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQ TWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNLSLQNELARNRRLAERLLETEESVRR DVARELHDDIGQTITAIRTQAGIVQRLAPNNASVRQSGQLIEQLSLGVYDSVRRLLGRLR PRQLDDLPLEQAVRSLMREMELEDRGIVSHLDWRINEAGLSENQRVTLFRVCQEGLNNIV KHASASAVTLQGWQQDERLMLVLEDDGCGLPPGSNLQGFGLTGMRERVTALGGTLTISCT HGTRVCVNLPLRYA >gi|289775432|gb|GG745511.1| GENE 76 81577 - 82905 2022 442 aa, chain + ## HITS:1 COG:ECs4604 KEGG:ns NR:ns ## COG: ECs4604 COG2271 # Protein_GI_number: 15833858 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 439 2 440 440 739 89.0 0 MFAFLKAPPDATPVSDKGELDERYRYWRRHILITIWLGYALFYFTRKSFNAAVPEILASN VLTRSDIGLLATLFYITYGLSKFFSGIVSDRSDARYFMGLGLIATGVVNILFGFSTSLWA FALLWALNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPMVVGAAALH YGWRAGMTIAGCLAILAGLYLCWRLRDRPQAVGLPAVGDWRHDALEIAQQQEGAGLTRKA ILTRYVLANPYIWLLSLCYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVTMFELGGF IGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGGLWLMPFASYVMQAACFFTTGFFVFG PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLSGWPLAQVMDIWHWTGFFVVIAIAA GISALLLLPFLNAQAPRTASEA >gi|289775432|gb|GG745511.1| GENE 77 83051 - 84442 2406 463 aa, chain + ## HITS:1 COG:ECs4603 KEGG:ns NR:ns ## COG: ECs4603 COG2271 # Protein_GI_number: 15833857 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 809 95.0 0 MLAFLNQVRKPTLDLPLDVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGAGS TSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGTAEELFGEAISEEDKET EENAMTKWQIFVEYVLKNKVIWLLCFSNIFLYVVRIGIDQWSTVYAFQELKLSKEVAIQG FTLFEVGALVGTLLWGWLSDLANGRRALVACIALALIIATLGVYQHASNQYVYLASLFAL GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT GWAGTFAALDAAAIGCICLMAIVAIFEERKIRREKKNRILQTA >gi|289775432|gb|GG745511.1| GENE 78 84579 - 85031 617 150 aa, chain + ## HITS:1 COG:no KEGG:KP1_5442 NR:ns ## KEGG: KP1_5442 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 150 5 154 154 270 99.0 2e-71 MIWIGLATLVVVFVVGFRVLTSDSRRAIRRLSERLGITPVPLESMIDQLGKTAGNEYLRY LERPNEAHLQNAAQVLLIWQVAIVDASEKNLHYWYRLMQKARLAAPITDAQIRLAQGFLR ELDPDASDLHNLQQRYNDLFLPEDGVHWLH >gi|289775432|gb|GG745511.1| GENE 79 85161 - 85484 184 107 aa, chain - ## HITS:1 COG:STM3778 KEGG:ns NR:ns ## COG: STM3778 COG2944 # Protein_GI_number: 16767062 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 170 83.0 6e-43 MTAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLN VSQPVFARYLNTSVSTVQKWETGAKRPSGMSLKLLSVVQKHGLKILL >gi|289775432|gb|GG745511.1| GENE 80 85468 - 85827 360 119 aa, chain - ## HITS:1 COG:STM3777 KEGG:ns NR:ns ## COG: STM3777 COG4737 # Protein_GI_number: 16767061 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 118 1 118 119 158 67.0 2e-39 MRIFKTKWFAREASSHGISDDELYQAIQSALQGKVVDLGGGVYKKRLNKNRDRAIILTKS AGYWFYTFLYAKQDMANINHRELMGFRELAKHYANLSEEKTTVLVKSKELVEIYNDSKK >gi|289775432|gb|GG745511.1| GENE 81 86039 - 87232 1586 397 aa, chain + ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 11 393 66 448 451 532 81.0 1e-151 MSHSNEAKPHARELARPNWSAVFAVAFCVACLITVEFLPVSLLTPMALDLGISEGMAGQS VTTTAFVAMFSSLFITSIIGKTDRRYVVILFSLLLTLSCLLVSFADSFTLLLLGRACLGL ALGGFWAMSASLTMRLVPMRVVPKALSIIFGAVSIALVIAAPLGSFLGGLIGWRNVFNGA AVMGVLCTLWVLKALPSLPGESASQQQNMFGLLKRPGVMAGMCAIFMAFAGQFAFFTYIR PVYMTLAGFDVDGLTLVLLSFGIASFIGTSLSSVLLKRSVKAALAISPLVLTACAVALVL WGESKIVASTVAIIWGFAFALIPVGWSTWITRSLSDQAEKAGSIQVAVIQLANTCGAAVG GVALDHLGLLSPLVLSGILMLFTGLLVATKVKVNPPA >gi|289775432|gb|GG745511.1| GENE 82 88872 - 89084 328 70 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0042 NR:ns ## KEGG: Kvar_0042 # Name: not_defined # Def: porin LamB type # Organism: K.variicola # Pathway: not_defined # 1 70 1 70 459 137 98.0 2e-31 MNTVKKLPLAMAVVAALCPISVMAQEFTQEQIDAIVAKAVDKALADRQAKIDAAANKKVD VITNPQTTAS >gi|289775432|gb|GG745511.1| GENE 83 89229 - 89531 385 100 aa, chain - ## HITS:1 COG:VC1283 KEGG:ns NR:ns ## COG: VC1283 COG1447 # Protein_GI_number: 15641296 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Vibrio cholerae # 2 99 1 98 111 87 54.0 7e-18 MIELEDAVMEIIVNAGQSRSLCFEALHAARTGNIDEARLLLNEADGYARRAHQMQTQLIE QDAGEARQPMTLIMVHAQDHLMNSLLAREFSEELIHLYQR >gi|289775432|gb|GG745511.1| GENE 84 89629 - 90951 1903 440 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 4 425 6 427 446 416 47.0 1e-116 MSSLYQSMIAVIEQSITPLAGRLGQQKYVIAIRDGFTAALPFMIIGSFMLVFIFPPFSPD TTNGFARGWLDFSQHYREQLMLPFNLSMGVMTFFISVGIGASLGRQFQLDPVMSGLLAFM AFLLVAAPYADGKISTQYLSGQGIFTALITAIYSTRVYAWLKQNNITIRLPKEVPTGVAR SFEILIPVLVVIATLHPLNLFIEAQTGMILPQAIMHLLEPLVSASDSLPAILLSVLMCQI FWFAGIHGSLIVTGIMNPFWMANLSANQAALAAGTVLPHVYLQGFWDHYLLIGGVGSTLP LAFLLLRSRATHLRTIGKMGIVPSFFNINEPILFGAPIIMNPMMFIPFVCVPMVNAVLAY GATRLGWLSQVVSLTPWTTPAPIGASWAANWTLSPVVMCVICMVMSAVIYLPFLRAYERS LMKTEVEKAKNSVPVAETVS >gi|289775432|gb|GG745511.1| GENE 85 90963 - 91277 435 104 aa, chain - ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 88 47.0 2e-18 MYKIMLCCSAGMSTSLLVRKMVEAANERDLPVQIDAYGVSEFDMQFPQYQVVLLGPQVKY MLKTLSDKAASLNIPVQPIDTMDYGMQRGDNVLNYALSLIPAAH >gi|289775432|gb|GG745511.1| GENE 86 91571 - 92512 1037 313 aa, chain + ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 274 2 290 340 112 32.0 7e-25 MSTINDVSRLAGVSKATVSRVLSGSRGVKEASRQAVLQAVEALNYRPNMIAQSLLSQSTG CIGVICAQDNINQTTSYLYALEKQLSQHQKHLLLRFANTSNGVMSSLEELTCGLCDNVLI IGARFPLNINRPDVVLVDCLDSEGDNSIQFDHAFAAETACHYLISQGRRQIALIHPQSSG FADQVLLGYKHALEKNFLPFNRNLVFLDNTSPSVAVQELVNNATTLNFNALLVSDEQQAQ RVVPQLQAFNRAVPQNVMVFSLAGSLQLPGIPTIPAIEYSMDAMASRIVNWLTEKTDNPG GSPLRGDLIIPKH >gi|289775432|gb|GG745511.1| GENE 87 92724 - 94094 1416 456 aa, chain + ## HITS:1 COG:RSc1093 KEGG:ns NR:ns ## COG: RSc1093 COG0477 # Protein_GI_number: 17545812 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 6 431 7 433 454 328 42.0 2e-89 MNHMNVVDVKAWIDARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAE MGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRF LTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA LIFGGVLPLVVLPFMIVMLPESAMNMVARRLPGEQIARALNRLGGQFTAETVFQLNAPPI TRSNKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLF QLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFISGMCIN GAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLAL PACLAGICILLHRMNHAKPRLTEAELDALSSPLEHR >gi|289775432|gb|GG745511.1| GENE 88 94108 - 95370 1355 420 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0048 NR:ns ## KEGG: Kvar_0048 # Name: not_defined # Def: extradiol ring-cleavage dioxygenase class III protein subunit B # Organism: K.variicola # Pathway: Benzoate degradation [PATH:kva00362]; Polycyclic aromatic hydrocarbon degradation [PATH:kva00624]; Aminobenzoate degradation [PATH:kva00627]; Microbial metabolism in diverse environments [PATH:kva01120] # 1 420 1 420 420 875 100.0 0 MANILGGIAVSHTPTIGFAVDHHKQQDPAWSPIFQSFEPLQRWLEEKKPDALVYIFNDHV TAFFFDHYSTFTLGIDSQYDVADEGGGPRCLPPVQGNAALSRHIGASLMADEFDMSFFMD KKLDHGLFSPLSALLPWDEAQGWPTAVIPLQIGVLQFPVPSARRCYKLGQALRRAIESFP EDINVAIVATGGLSHQVHGERCGFNNPDWDAQFVDMLVNDPEKLTEMTLGEYAELGGMEG SEVIMWLVMRGALSANVTETWRDYYLPSMTGIATLILENNARLPPVDTLTRHRQHMAQQL AGVEKLPGTYPFTHERSLNGLRLNRFLHRLIEPAWRERFLQSPQSLYAEAGLSEEEQQLL NARDWRGLIQYGASFFLLEKMGAVVGVSNLHIYAAMRGQTLEAFQQTRNQQVTYSVAGKR >gi|289775432|gb|GG745511.1| GENE 89 95367 - 96557 1376 396 aa, chain - ## HITS:1 COG:YPO0084 KEGG:ns NR:ns ## COG: YPO0084 COG0583 # Protein_GI_number: 16120435 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 52 392 1 343 348 324 53.0 2e-88 MQLRFFCQVALRGSVSRAADDLFRTQSAITRAIRDLESALNVTLFERHYSGMVPTEYGKC ILPRARRAIDDLQAIPALLQKHHTRSSGPLADAGWLFNTRRLAIFIQLYHVNHTQTVAQQ LGITQPAVSAALKVLEKGADSALFRRTPEGVRPTPAAELLYPPVSRALNELENIWSDIAA RRGVLEGTVRIGALPLSRTRLLPSAIAAFLAQHPGITLMTNESPYESLVADMRAGNIDFI IGALRQDEDLPDLCSEALFEEDMLILLRNNHPLLRHPDPRSQLATAQWVLPRANAPARHL LDKAFITLGLPLPQPTVETGDAAMVRGLLQDSDMLAAVSASQMRFETDNGLLSVLPVPLP DTTRRIGLTFRAGSLPSPATQALLRFIYQQVQDGTV >gi|289775432|gb|GG745511.1| GENE 90 96721 - 97461 981 246 aa, chain + ## HITS:1 COG:YPO0083 KEGG:ns NR:ns ## COG: YPO0083 COG2120 # Protein_GI_number: 16120434 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Yersinia pestis # 5 246 69 310 310 435 83.0 1e-122 MSHPVSEKSALVVSAHSADFVWRAGGAIALHALQGYQVHVVCLSFGERGESAKLWRKGNM TEEAVKQVRREEAQAAAEILGASVEFFDIGDYPLRADKETLFRLADVYRRIQPHFVLTHS LHDPYNYDHPLASHLAQEARIIAQAEGYRPGEKIVAAPPVYCFEPHQPEQCNWKPDVLLD ITAVWEKKYQAIQCMQGQEHLWEYYTRVALQRGVQAKRNIGITAARDIVHGEAFQSIFPR VTENLA >gi|289775432|gb|GG745511.1| GENE 91 97458 - 98171 698 237 aa, chain + ## HITS:1 COG:YPO0082 KEGG:ns NR:ns ## COG: YPO0082 COG0684 # Protein_GI_number: 16120433 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Yersinia pestis # 1 230 1 230 237 310 68.0 1e-84 MNLLNKKGLVIRHLPRHDEAVLRRCEAAGVATLHEAWDRQGLMGPAIRPIQQGVSRAGNA VTVLVTPGDNWMFHVAVEQCRAGDILVVAPTSPCGDGFFGDLLATSLQSRGVVGLVGDIG IRDSQTLREMGFAVWSRQVYAQGTVKESLGSVNVPVICAGQLVQPGDVVVADDDGVVVLP HAQVRDVLDKAEARMSNELAKRERMRHGELGLDIYAMRPRLAEKGLRYYDRADEVEE >gi|289775432|gb|GG745511.1| GENE 92 98172 - 99257 932 361 aa, chain + ## HITS:1 COG:SMc00497 KEGG:ns NR:ns ## COG: SMc00497 COG2828 # Protein_GI_number: 15965523 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 1 351 1 351 352 405 61.0 1e-113 MAQRGIPCLWMRGGTSKAACFLADDLPADPVQRDAVLLAVMGSPDPRQIDGIGGADPLTS KVAIIRRSARPDADVDYLFAQVNVAAATVDYGQNCGNILAAVGPFAIERGLVRHDAPLTR VRIYMENTGQLAVAEIPCDADGVDYAGESRIDGVPGSASPILLHFFDVAGSSCGALLPTG RVRDRFDGVEVTCIDNGMPVILLRACDLGCTGYETREQLDNDDALKRRLESIRLQAGPLM QLGDVSQRTVPKMTLIAEPRHGGAISSRTFIPHRCHASIGVFGAVSVASACLLPGSVAQG LAQVAPGDTPLLSVEHPTGEFSVTLQLDADGALAGCGLLRTARLLFAGEVFIPARVWPRE E >gi|289775432|gb|GG745511.1| GENE 93 99260 - 100123 927 287 aa, chain + ## HITS:1 COG:SMc00501 KEGG:ns NR:ns ## COG: SMc00501 COG2084 # Protein_GI_number: 15965519 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Sinorhizobium meliloti # 2 276 3 284 294 144 38.0 1e-34 MTIAFIGFGEAGGILAADLAREHAVTIWDCKLNGPAREAMGKKARDSRVQVGNSLAQALE GATLVFSTVTAGEALKVAQQAAALLQPGQYFLDLNSVAPETKRQAAEHFLPGTYIDVAVM APVPPARLQTPLLIGGPQAEAIAPRLQGLGLNARYGASTVGQVSAIKMCRSVMIKGLEAL TTECLFAAREYGVEEEVLSSLHHSFPSLGWTGAFPDYLISRVAEHGIRRSEEMEEVVKTL RDVGSAGIMSEAIAKSQRQLPEQMAARSLSYRQLTPFDWKTLVARLK >gi|289775432|gb|GG745511.1| GENE 94 100127 - 100417 336 96 aa, chain - ## HITS:1 COG:no KEGG:KP1_5414 NR:ns ## KEGG: KP1_5414 # Name: not_defined # Def: putative secreted protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 96 21 116 116 163 98.0 2e-39 MKACWMVCLVTALSATSAWAESPLQSLQFEQQKQLVLKAVKEKCAPASHLSDNDFANKVL ATDGNKNAVREATLAKERNNQKSYQAAIDKIVCPAK >gi|289775432|gb|GG745511.1| GENE 95 100524 - 101426 1362 300 aa, chain - ## HITS:1 COG:yicL KEGG:ns NR:ns ## COG: yicL COG0697 # Protein_GI_number: 16131530 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 298 1 298 307 410 83.0 1e-114 MGSSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGD RIFRVLQNRRDALSLLFFSLFGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALA RKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFWGIASAFAAAFYTTYPSTLI ARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVRAA >gi|289775432|gb|GG745511.1| GENE 96 101578 - 103008 2176 476 aa, chain - ## HITS:1 COG:VC0207_2 KEGG:ns NR:ns ## COG: VC0207_2 COG1263 # Protein_GI_number: 15640237 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Vibrio cholerae # 108 476 1 368 368 483 75.0 1e-136 MAKITKEMIARILAHVGGAANVAQAGNCMTRLRLTLRDESLADSAAIRQIDGVMGVIVSD EQFQVVLGPGKAQTAAEMMNVLLEEAPAAPTLADVAAEKKQALKGKQTSAVQKFLAKFAT IFTPLIPGFIAVGLLLGFATLAEQVFVLENAHPNASLVALIGYMKVFSKGMFTFLSILIG YNAQKAFGGSGVNGAIIASLFVLGYNPEATSGFYAGISTFFGHGIDPRGNIIGVLIAAIL GAWVERQVRRVMPANLDMILTSAVTLLIMGAVTFTVIMPIGGWLFTGMSWLFLHLNGNPF GSAVLAGLFLLAVMFGVHQGFVPVYFALVDAQGFNSLFPILAMAGAGQVGAALALFWRAK RDSLLRTQIKGAIIPGFLGIGEPLIYGVTLPRMKPFVTACLGGACGGFFVGLIAWLGLPV GLNTVFGPSGLVALPLMTSGSGIYAGMAVYAGGLAVSYLCGFVLTWLFGSKNVDLS >gi|289775432|gb|GG745511.1| GENE 97 103033 - 103935 1314 300 aa, chain - ## HITS:1 COG:VC0206 KEGG:ns NR:ns ## COG: VC0206 COG2103 # Protein_GI_number: 15640236 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Vibrio cholerae # 1 298 6 303 305 352 65.0 5e-97 MSIDLSKLLTERRNANSANIDTLSTLDMLTVINQEDQQVAQAITPYLPQIAEVVDKVATA LQAGGRLIYIGAGTSGRLGILDASECPPTFGTRPEQVVGIIAGGHKAILSAVENVEDNKA QGAMDLQNLNFSHRDVLVGLAASGRTPYVIGAMEYAHSQNAFVAIVSCNPHGEMAQLADV AITPVVGPEVVTGSTRLKAGTAQKLVLNMISTGAMIRVGKVYSNLMVDVEATNAKLIERQ VSIVMEATDCDRPTARKALEACGRHCKTAIVMVLADLSAEAAQSLLAKNNGYIRKALSNT >gi|289775432|gb|GG745511.1| GENE 98 104098 - 105261 1661 387 aa, chain - ## HITS:1 COG:ECs1866 KEGG:ns NR:ns ## COG: ECs1866 COG0477 # Protein_GI_number: 15831120 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 382 1 382 387 441 69.0 1e-123 MPRVSLSWALILGLLSGIGPLCTDFYLPALPEITQQLQATSTQTQLSLTAALIGLGLGQL FFGPLSDRIGRLKPLALSLLLFIFASAMCALTRDINMLIVWRFLQGFAGAGGSVLSRSIA RDKYQGTLLTQFFALLMTVNGIAPVLSPVLGGYVITAFDWRILFWTMAAIGGVLLVMSLT ILRETRPAAAMHTARQQRGQPVLKNRRFLRFCLIQAFMMAGLFSYIGSSSFVMQSEYGMS AMQFSLLFGLNGIGLIIAAMIFSRLARRFNAESLLRGGLTLAVSCAAIMLLFAWLQLPVL ALVGLFFTVSLMSGISTVAGAEAMSAVDAAQSGTASALMGTLMFVFGGIAAPLAGFGGET MLKMSLAMAICYLLALLLGLSKPRSAR >gi|289775432|gb|GG745511.1| GENE 99 105307 - 106671 465 454 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 7 452 8 455 460 183 27 8e-45 MFRLSFMFIALLTAGCVSLDPHYDRPAAPVPATLPGAHGESTAVVGDWQKVVNDARLKKV VSIALNSNRDVQKALADIEAARAQYGETRASLFPTVDAELSHTRSKTVASGLSSASQADG AVSSFELDLFGKNQSLSRAARETWLASEFTAQNTRLTMIADLTTAWVTLATDNSNLALAQ QTMDSAANSRNIVARQMAVGTASAGDVSSAESVYQQARASVASYRTLVAQDKNAINLLAG ETVPESLLPGTLESLGDNSIALVPAGVSSSVLLRRPDIQEAEHNLKSANADIGAARANFF PSISLTASAGVGSDSLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYAEAEKKGLIAT YEKSIQSAFKDVADALARRETLSEELDAQRQYVAAEQTSLDIAMKSYQAGVGDYLSVLTA QRTLWSAKTTLLSLQQTDLNNRITLWQSLGGGAS >gi|289775432|gb|GG745511.1| GENE 100 106675 - 109782 4562 1035 aa, chain - ## HITS:1 COG:ECs1864 KEGG:ns NR:ns ## COG: ECs1864 COG0841 # Protein_GI_number: 15831118 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 979 1 977 1027 1605 86.0 0 MFSRFFVRRPVFAWVIAILIMLAGVLAIRTLPVGQYPDVAPPAVKISATYTGASAETLEN SVTQVIEQQLTGLDHLLYFSSTSSSDGSVSITVTFEQGTDPDTAQVQVQNKVQQAESRLP SEVQQSGVTVEKSQSSFLLILAVYDKTNRATSSDISDWLVSNMQDPLARVEGVGSLQVFG AEYAMRVWMDPTKLASYSLMPSDVQSAIEAQNVQVSAGKIGALPSSNAQQLTATVRAQSR LQTPDQFKAIIVKSQADGSVVRLSDVARVEMGSEDYTATANLNGHPAAGIAVMMAPGANA LDTATLVKSKIAEFQRQMPQGYDIAYPKDSTEFIKISVEDVIQTLFEAIILVVCVMYLFL QNFRATLIPAVAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERI MRDEGLPAREATEKSMGEISGALVAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAMM LSVVVALTLTPALCGALLSHSKPHTKGFFGAFNRLWGRTEAGYQRRVLGGLRRGAVMMGA YALICGAMALAMWKLPGSFLPVEDQGEIMVQYTLPAGATAVRTAEVRRQVTDWFLTKEKA NTDVIFTVDGFSFSGSGQNAGMAFVSLKNWSQRKGDDNTAQAIALRATKELGTIRDATLF AMTPPSVDGLGQSNGFTFELMASGGTDRDSLMKLRSQLLAAANQSSELQSVRANDLPQMP QLQVDIDNNKAVSLGLSLSDVTDTLSSAWGGTYVNDFIDRGRVKKVYIQGESDARAVPSD LGKWFVRGSDNSMTPFSAFATTHWQYGPESLVRYNGSAAFEIQGENAAGFSSGAAMDKME KLADSLPAGSTWAWSGISLQEKLASGQAMSLYAISILVVFLCLAALYESWSVPFSVIMVI PLGLLGAALAATLRGLSNDVYFQVALLTTIGLSSKNAILIVEFAESAVDEGYSLSRAAIR AAQTRLRPIVMTSLAFIAGVLPLAIATGAGANSRVAIGTGIIGGTLTATLLAVFFVPLFF VLVKRLFTRQRPSQE >gi|289775432|gb|GG745511.1| GENE 101 109782 - 110906 1309 374 aa, chain - ## HITS:1 COG:ECs1863 KEGG:ns NR:ns ## COG: ECs1863 COG0845 # Protein_GI_number: 15831117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 374 1 373 373 499 79.0 1e-141 MKYIIAPIATALFLLSGCDNAQTSAPQQPAPEVGVVTLQSQPVPVVSQLTGRTTASLSAE VRPQVGGIIQKRLFTEGDMVKAGQALYQIDPSSYRATWNEAAAALKQAQALVVSDCQKAQ RYASLVRDNGVSRQDADDAASTCAQDKASVESKKAALESARINLNWTTVTAPIAGRIGIS SVTPGALVSADQDTALATIRGLDTMYVDLTRSSVDLLRLRKQSLASNSDTLSVTLTLEDG STYQEKGRLALTEVAVDESTGSVTLRAIFPNPQHVLLPGMFVRARIDEGIMNDAILAPQQ GITRDAKGDATALVVDAANKVEQRTVETGDTYGDKWLVLSGLKAGDKLIVEGTSKVAPGQ TVKAVAVNNNGGNA >gi|289775432|gb|GG745511.1| GENE 102 111286 - 111702 669 138 aa, chain + ## HITS:1 COG:STM1857 KEGG:ns NR:ns ## COG: STM1857 COG0454 # Protein_GI_number: 16765198 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 136 1 136 139 168 61.0 2e-42 MTLIITKSINPDDQQELFAGLRQYNQQYLDAAQFGDLGVYSRDAQGVMQGGLIAKRKGNW LCIEYLWVSEATRGRGLGSELMQEAEQQAQALGCSHLLVDTFSFQALPFYQKLGYQLQMS LPDFPHAGMQRHYLSKAL >gi|289775432|gb|GG745511.1| GENE 103 112230 - 112877 873 215 aa, chain - ## HITS:1 COG:RSc0162 KEGG:ns NR:ns ## COG: RSc0162 COG1309 # Protein_GI_number: 17544881 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 26 214 6 203 233 99 34.0 5e-21 MTAQKDQDAPRRPGRPRGKKPGTANREQLMDIALTLFARDGTARVSLNAIAKEAGVTPAM LHYYFSSREALVTQLIEERFMPLRNHISRIFVDHPQDPVLALTMMVETLAHMAEKNAWFA PLWMQEIIGEMPILRQHMDARFGEERFQVMLETVRRWQLEGKINPALSPELLFTTVISLV LVPFSRIHSDPRLQAVNRQTIISHALALMGHGVGG >gi|289775432|gb|GG745511.1| GENE 104 112958 - 114436 2196 492 aa, chain + ## HITS:1 COG:Cgl0377 KEGG:ns NR:ns ## COG: Cgl0377 COG0477 # Protein_GI_number: 19551627 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 16 491 46 542 544 328 39.0 2e-89 MTSEVANPPVQSIRLLFSALLLVMLLSALDQTIVSTALPTIVGELGGLDKLSWVVTAYIL SSTIAVPLYGKFGDLFGRKIVLQVAIGLFLVGSALCGLAQNMTQLGLMRGLQGLGGGGLM VISMAAVADVIPPANRGRYQGLFGGVFGLATVIGPLIGGFLVQHASWRWIFYINLPLGLF ALLVIGAVFHSSNKRSQHQIDWLGAIYLSMALLCIILFTSEGGSVHAWNDPQLWCILAFG IVGIIGFIYEERMAAEPIIPLALFRNRSFLLCSLIGFVIGMSLFGSVTFLPLYLQVVKEA TPTEAGLQLIPLMGGLLLTSIISGRIISRTGKYRLFPILGTLLGVTGMVLLTRITIHSPL WQLYLFTGVLGAGLGLVLAVQNAMPAQMYGVATSGVTLFRSIGGSIGVALFGAVFTHVLQ SNLQQLLPEGAVLPPGMNPVAVQHLPADIRLDYLDAFGAAIHAAFLMAAGIMAVAFVLSW LLKEAPLKTATH >gi|289775432|gb|GG745511.1| GENE 105 114433 - 115347 1156 304 aa, chain - ## HITS:1 COG:mlr3528 KEGG:ns NR:ns ## COG: mlr3528 COG0583 # Protein_GI_number: 13473045 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 300 1 299 300 247 49.0 2e-65 MDRLSAMALLVKVTELGSMSAAARALNMPLTTVSRHIGELESALGVRLLARTTRKLTLTD AGVDYVAAAQRILEEVENAERQATGEYQEPKGELVISAPTMFGRQHVLPVISEFIARYPQ IRVRLLLSDRNADLVSDHVDLAVRIGDLADSSMVATRLGTMRIVACAHPALLAKYGEPQR PRDLAALPIIRIESPMPYRGWRFRAAERDDQLINLPPVLSVTTPESAADAARLGVGVARL LHYQALDGLRHGELRLLLENVEPDPAPVHLLYTARDLAPLKLRKFIDFAAPALRQALLRI AGAA >gi|289775432|gb|GG745511.1| GENE 106 115443 - 116072 807 209 aa, chain + ## HITS:1 COG:AGpA816 KEGG:ns NR:ns ## COG: AGpA816 COG3576 # Protein_GI_number: 16119779 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 181 31 213 216 169 49.0 3e-42 MAATFLDIAITPDVMDVQHEMGSDTLWQTPHSRRQADRFGDSEAGMIATRDSFYLATVSQ SGWPYIQHRGGPVGFLHLLDDTTLAMADFGGNRQYITTGNLRGSVRACLFLMDYPRRARL KIYATVEVVAAEDHPQLLAQVAPVNYRARIERLFLFHLQAFDWNCPQHITPRYSAQQVAE YSQNLQQRIHDLEQENQRLQQQLASKGDS >gi|289775432|gb|GG745511.1| GENE 107 116072 - 116542 859 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972537|ref|YP_001337683.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 156 1 156 156 335 98 2e-90 MNEQRPPLPPFTRDSAIQKVRVAEDGWNSRDAEKVALAYTVDSEWRNRSEFVHGRGQIVE FLQRKWRKEQQYRLIKELWAWQENRIAVRFAYEWCDDSGNWFRSYGNENWEFDKHGLMQT RYACINDLPIAESERLFHWPQGRRPDDHPGLSELGL >gi|289775432|gb|GG745511.1| GENE 108 116562 - 117098 964 178 aa, chain - ## HITS:1 COG:alr7524 KEGG:ns NR:ns ## COG: alr7524 COG2128 # Protein_GI_number: 17158660 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 24 173 30 178 193 79 30.0 3e-15 MSRLADIREQDATGKAADIFAGIKKAMGKVPNAYLTIGGHSPAALQQALAHNAMLHKGSL SAQQLEAINLSVSEATGCDYCLAAHTLMAKKAGFSSEQIHALRRGEYAEEAQLDALVKFA QTLVTTTGTLPEADVAALRNAGFSDQQVIEIISAVSAILFTNMVNRVNDTVVDFPKAD >gi|289775432|gb|GG745511.1| GENE 109 117215 - 118120 1215 301 aa, chain + ## HITS:1 COG:HI1052 KEGG:ns NR:ns ## COG: HI1052 COG2207 # Protein_GI_number: 16272984 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Haemophilus influenzae # 1 300 1 294 298 153 31.0 5e-37 MDSLSHLLALLAPRCEVNLHCRFGGRWQAGHQQMRSGVVPWHVVLRGEGRLNVGGQTHHL RAGDVVLLPHGSPHLMESLVEWGQVLPVAHRFNGTVTEMRAGPAEGALEMLCGEFYFGPH VSWLFSEASTLIHLHTDAREDCPELDALLNILVRESLAQRPGGSAIVRSLGDTLLVLLLR MLLGEQQPPGGLLRLMSDERLMPAVLAVMATPEQPWTLETMAARAFLSRATFARHFARVY HLTPQAWLSQLRMALAARLLRLERQTNLEVIAERCGFQSLASFSKRFKMRYGVTPGEWRR G >gi|289775432|gb|GG745511.1| GENE 110 118248 - 119057 1209 269 aa, chain + ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 21 269 24 272 272 444 87.0 1e-125 MRLRLRAAAAVMLAGLALVGCDQKGNEAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVE LVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYHLVAVGNTFVFPMAGYSRKIK SVAELKDGATIAIPNDPTNLGRALLLLQKEKLITLKAGTGLLPTAVDITDNPRNLKIMEL EGAQLPRVLDDPKVDVAIISTTYLQQTGLSPVRDGIFIEDKNSPYVNIIVTREDNKDAEN VKEFMQSYQSPEVAKAAETIFNGGAVPGW >gi|289775432|gb|GG745511.1| GENE 111 119082 - 119936 1263 284 aa, chain + ## HITS:1 COG:VC1656 KEGG:ns NR:ns ## COG: VC1656 COG0697 # Protein_GI_number: 15641661 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Vibrio cholerae # 21 283 21 285 287 170 40.0 2e-42 MVRQRQADLLLIAATVIAACGWIFSREAIAGMPVFAFLGLRFFFAALLLLPFCRGFRPQK QHWPKLIISGLWFALNLCLWIYSVSTTASLGEGAFIMSLSMMFVPLTAWVMMKVHPPRAW WECLPIAVVGLGLLSLHMPIAFHPSQGWFLLTALVQSIWFCYTSRCAREVPLIPLTTVQL AITGIVGLTISAAVERWDQPMTLPTLGWLVASIVIATSLRFGLQMKGQKYAAVASAAIIM VLEPLLTVIAAALWYGEQLPLQKIIGGVLILVAQLWFRWRMLKP >gi|289775432|gb|GG745511.1| GENE 112 119926 - 120486 898 186 aa, chain - ## HITS:1 COG:SSO2167 KEGG:ns NR:ns ## COG: SSO2167 COG0494 # Protein_GI_number: 15898948 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Sulfolobus solfataricus # 46 175 32 161 166 80 32.0 2e-15 MKKKLTAADMHDPQVIAETQWFSMRKVGIDVAPGERRDFYSIHYPRPAVGIVAIQDEKVL LIRHYRYLIDQVVWAIPSGGVDEGEDPAVAALRELREETGWQAQRVEEIIRFNPSYGSSD QLFITWLATGLRWVGMDADQDEVMETGWFTFDEINQLIARGEMPDGLSLVPLLQLMAQRR SGSLTA >gi|289775432|gb|GG745511.1| GENE 113 120654 - 121433 985 259 aa, chain + ## HITS:1 COG:ECs0400 KEGG:ns NR:ns ## COG: ECs0400 COG2220 # Protein_GI_number: 15829654 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 259 5 262 262 337 60.0 9e-93 MNITHIRNATQRIDYAGKRFLIDPMLADKGAWPGFPGTARSELRNPLVELPFSRDKIIDV DAVIVTHTHDDHWDAAAIAAIPKTLPVFVQHEADAALLRSQGFQDLRLLSADSEFAGVHL QKTTSGQHGSDRTYAVPAMAERLGEACGVVFRHPQEKTLWLMGDTIWRDDIAADLLKLRP DVVVLNAGYAHVIGFGPIIMGKEDLLNVHFALPEAKIMAIHLEAVNHCLVSREEMRQYAL DNQIADVVSIPQDGETVVY >gi|289775432|gb|GG745511.1| GENE 114 121455 - 122408 1184 317 aa, chain + ## HITS:1 COG:ECs0399 KEGG:ns NR:ns ## COG: ECs0399 COG4977 # Protein_GI_number: 15829653 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Escherichia coli O157:H7 # 1 314 1 314 317 446 66.0 1e-125 MKLTDVAIVAVEGFSPFHYAVPCMLFGDSVSEIKRFNLHICAERPGLLRARDGFALYATG DFAALEQADIVVVPYWGEVDRRPPQALLDSLVRARDNGAEIVGLCLGAFVLGYAGLLDGR RAATHWEFEQDFQRLFPQVQLDINALYVDDQRVITSAGTAAALDCCLYLIRQRFGSLAAN QIARRMIVSPHREGGQAQFIAQPVPKNTRDARINCLLDYLQQHIAEPHSLDSLARVVAMS RRTLTRHFARATGMSITDWLTAERLRRSQSLLEAGDLPVEQVAEAVGYLSAVTWRQQFKA RFGVSPTEWRRTFRRGA >gi|289775432|gb|GG745511.1| GENE 115 122405 - 123454 1306 349 aa, chain - ## HITS:1 COG:yahK KEGG:ns NR:ns ## COG: yahK COG1064 # Protein_GI_number: 16128310 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 347 1 347 349 575 83.0 1e-164 MLINAIGTYSASQLLESMAITRREPGPQDVQIAIAYCGVCHSDLHQARSEWAGTHYPCVP GHEIVGRVTAVGNAVSRYAVGDLVGVGCMVDSCQQCEECAEGLENYCDHMVLTYNGPTQD APGHTLGGYSQQIVVKEHYVLRITHPEAQLAAVAPLLCAGITTYSPLRHWHVGPGKKVGV VGIGGLGHMGIKLAHAMGAHVVAFTTSESKRNAARALGADDVVVSRNDDEMAAHVKSFDF ILNTVAAPHNLDAFTTLLKRDGTMTLVGAPATPHPSPEVFNLIFRRRSIAGSMIGGIPET QEMLDFCAEHGIVADIELIRGDEINEAWERMVKGDVKYRFVIDSATLAG >gi|289775432|gb|GG745511.1| GENE 116 124060 - 124524 353 154 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0078 NR:ns ## KEGG: Kvar_0078 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 154 79 232 232 306 100.0 1e-82 MVVTPLFSPSILGFMDGYGLFDDIPQKRHYVLFAETDLHGRWISHQAAVDILNEQNLWRH VTHILAQRLMVLSMREQELMGVDSYLMVRTLLTELADYPEAYRRQINVLSFIQRRTNLSR SRIMSILSELRKGDYITIHRGVLRTIAHPLPAHF >gi|289775432|gb|GG745511.1| GENE 117 124576 - 124866 510 96 aa, chain - ## HITS:1 COG:SMa0325 KEGG:ns NR:ns ## COG: SMa0325 COG1359 # Protein_GI_number: 16262629 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 5 88 7 90 100 58 34.0 3e-09 MISLIAVLKAKPGQTDALRQALQALLLPTRQEPGNLDYALFQLRDAPDTFYMREAWQGQD ALDAHVAMPYFQAFMTQMESLLAEPLRLDYLTAIEP >gi|289775432|gb|GG745511.1| GENE 118 124868 - 125875 1310 335 aa, chain - ## HITS:1 COG:PA3567 KEGG:ns NR:ns ## COG: PA3567 COG0604 # Protein_GI_number: 15598763 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 335 1 337 337 405 63.0 1e-113 MKAIAITQAAADGNNIPSLTEIDLPVPTAHGRDLLVAVKAISVNPVDTKVRAGFQGDTPR VLGWDAVGVVQSVGEEVTLFAPGDEVWYAGALGRAGSNSEYQLVDERLVAHKPRTLDNAA AAALPLTAITAWELLFHRLGVKEGGNAGDTLLIVGAAGGVGSILTQLASKLTAMTVIGTA SRPESQQWVREAGAHHVIDHSKPLANELARIGISAVTHVASLTNTEQHFNALIDALAPQG KLALIDDPETLDVVPLKAKSLSLHWEFMFTRSMFETDDMIAQHQLLTRVAALIDSHTIKT TLGEHYGAITAANLQKAHRQLETGRAVGKIVLEGF >gi|289775432|gb|GG745511.1| GENE 119 125988 - 126455 668 155 aa, chain - ## HITS:1 COG:no KEGG:KPK_0075 NR:ns ## KEGG: KPK_0075 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 155 1 155 155 315 99.0 3e-85 MTPELRHCFSITIQVDKPIIVSRSPQTGKRQLIPIIGGSVSGQLRGHVLPGGVDSQIIEP NGTCRLSARYALQVAEGTVYVENNGIRRVPAQYHDQLFADDMRFFSDIPPEAIYFRTVPS FEVDTPALSWLTTSLFICAGGRTQDGVMLDFYQVG >gi|289775432|gb|GG745511.1| GENE 120 127010 - 128404 508 464 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 6 442 9 517 522 200 28 9e-50 MKDHILSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLLARALDAI SDPCMGLLADRTRSRWGKFRPWILFGAIPFGLVCVLAYSSPDLSHNGKLIYAAVTYTLLT LLYTVVNIPYCALGGVITDNPTQRISLQSWRFVLATAGGMLSTVLMMPLVNFIGGEDKAL GFQGGIAVLSVVAFLMLAFCFFTTKERVEAPPSSTSMREDLRDIWRNDQWRVVGVLTILN ILAVCVRGGAMMYYTTWIMGSAALFTVFLTTYCVGNLIGSALAKPLTDWKCKVSVFWWTN ALLAVLSVAMFFVPMDAEITMFVFIFIIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTG ISFAGTLFVLKLGLALGGALIGWMLAGGGYDAAAKTQNSATLTIIIALFTLVPAVCYLLS AVIAKRYYTLKTPFLKKMMAELAEGARRNEQDFTAAPIDKEWQN >gi|289775432|gb|GG745511.1| GENE 121 128417 - 130735 3078 772 aa, chain + ## HITS:1 COG:STM3749 KEGG:ns NR:ns ## COG: STM3749 COG1501 # Protein_GI_number: 16767034 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Salmonella typhimurium LT2 # 1 772 1 772 772 1478 88.0 0 MKISDGNWLIQPGLNLIQPVQVYEVERQGNEMVVYAAPRDVRERAWQLDTPLFTLRFFSP QEGIIGVRMAHFQGALDNGPHYPLNVQKDIHVEIENTAEFAELKSGNLSVRVTKGEFWAL DFLRDGVRITGSQLKNNGYVQDSKTQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE TWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPQRVSFEVGSEKVSKVQFSVEGEYLEYF VIDGPTPKAVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERHLPL HVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIKRLKAKGLKVCVWINPYIGQRSPVFKEL KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPEACQWYADKLKGLVAIGVDCFKTDFGER IPTDVQWFDGSDPQKMHNHYAFIYNELVWKVLKETVGEQEAVLFARSASVGAQQFPVHWG GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH GSKSYRVPWAYDEESCDVVRHFTQLKCRMMPYLYRQAALANEFGTPMLRAMMLEFPDDPA CDYLDRQYMLGDSVLVAPVFSEAGEVQFYLPDGRWTHLWHNDELPGSRWHKQHHDALSLP VYVRDNTLLALGNNDQKPDYAWHEGTAFQLFHLEDGREARCDVPAADGSTIFTLKARRQG NTIAVSGEGEARGWTLCLRNIPQVAGVQGGTQAGSEWGMVVSAEGNTLTITL >gi|289775432|gb|GG745511.1| GENE 122 130894 - 131616 910 240 aa, chain + ## HITS:1 COG:CAC3424 KEGG:ns NR:ns ## COG: CAC3424 COG1737 # Protein_GI_number: 15896665 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 12 229 7 222 235 65 25.0 7e-11 MDLENIFRDVKLSKTEMTVLRFIQNDPEQCIRQGVRAVAEQCYSNPSSLVRLAKKLKFSG WLELVYFIKFNITMPKLDVTNDIDYMSVQPEEALTLLLASLKQQRILIHGSGFSQLIAQY IYNKFLVTGVNASLALWPDYEILEQKNAACFDSIWIISKSGRSSSALNWVKALEGKEINL VCFTGDYQSPLAQAADTAFIIHDPQKFDDDIYWSNPFFGYCILGFERLLKMWFTSLRSNS >gi|289775432|gb|GG745511.1| GENE 123 132240 - 133619 1742 459 aa, chain - ## HITS:1 COG:SMb21463 KEGG:ns NR:ns ## COG: SMb21463 COG1486 # Protein_GI_number: 16265037 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Sinorhizobium meliloti # 1 450 1 450 461 287 39.0 3e-77 MKLTVLGGGGVRSAFLAKSLAYNAHRIGLTEVVFLDNSADNLAIFGEIARYVFNTIRPDI QFSTTTDPVAALQDANYIITTLRVGGDESRIRDERIALQHNTLGQETTGAGGFAMAMRSI PAILRYCRLIEEHAAEDAILFNFTNPSGLVTEAIVKSGFKRRVYGICDAPSELIRELPAI LGCEERDLSVECYGLNHFSWFTHFTVRGEEVTERLIASPELYQKTAMQYFSPELVRLCDN QLLNEYLYYYYYREVALKAIQEAGETRGEQIARINQEMREALRTVDARTQPEAAFTIWMQ HYLRRENSYMQNESQQEKFHTREPLTLRQFIEEPDTGGYAGVALDILEAVNSTTTKRIVV SIQNHDTLDFLRPDDVIEISCDLSRDGLKPVTPVKVPTAQKNMISCVKEYERLAVAAILQ QDKSLAVRALMAHPLIGSYSLAKTLVEAYLDDEQFAAWQ >gi|289775432|gb|GG745511.1| GENE 124 133632 - 135191 1780 519 aa, chain - ## HITS:1 COG:CAC3425_1 KEGG:ns NR:ns ## COG: CAC3425_1 COG1263 # Protein_GI_number: 15896666 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 4 424 1 418 440 325 39.0 1e-88 MPEIRQRILENMQKFSRAMIGAVLFLPVIGLILALSSVLTNPTLIAETSFLHQLGQMLGD TFWPLFGNLGLLFCVGISYGLAKDKKTEVALVAVMCFIMFLGANHSWLEHTHGLAEKING EYYGTGQTQLLGFVVVDMGVFLGIILGCTIAWVHNKVSAIELPGALSMYGGAKLTLVAMT PVVIFYAIAFTWIWPFMTHGISALTGFMKNAGVAGVFVYGFFEKFLIPTGLHHFVWSPFQ LTQIGGTLNVDGQVVSGTQAIFLAYMRHPDLTPVMNDALRFSQQGMTTIFGLAGASLAFY HTAKPEKKVMAKAILLPAIITSMLTGITEPIEFTFLFVSPLLWVIHATLTAASQAICDIF TVRPWGASGLIEFLIYNLPLPVSLTRWPGYVLIGIGQFAVYYVIFRTLVVKLNLKTPGRE DDENVKLYSKAEYRQKVAQPQSVTDDIIRGLGGKENILSVDNCFTRLRVAVRDMALVDDA QLKNTGANGVVRNRNEVQVIYGVKVGQVRSRVDNWLAEN >gi|289775432|gb|GG745511.1| GENE 125 135442 - 137139 2023 565 aa, chain - ## HITS:1 COG:no KEGG:KPK_0082 NR:ns ## KEGG: KPK_0082 # Name: not_defined # Def: AsmA family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 565 1 565 565 1028 100.0 0 MKFLGKLILWLLVALLLVIVGAWFLLQTHWGARQASAWLSNGTGWQVSFDAMEHDFSSPL HVQLQNVTFGREGKPATLVAKTVDIGFSTRQFSDPLHADEIVLNDGTLNLSPHSADLPFA ADRLMLRNMAFNSPETGWALSAQRVTGGVSPWTPEAGNVLGKTAQIQMSAGSMTLNGVEA SNVLIQGRIDQGEVTLSTLGADVARGTLTGNAKRSADGSWLVDNLQLNEIRLQSPASLAE FFAPLTTVPSLQIGRLDITDARLQGPDWAVTDLDLSLRNLTLSHGGWQSQDGTLSMNASE FIYGSLHFFDPILNAEFSPQGIALRQFSSRWEGGMVRTSGNWLRAGNALVLDDTAFAGLE YTLPANWKQLWMAPMPAWLQSLTLKKFSASRNLIIDVDPAFPWQITALDGYGGELQLVKN GNWGVWNGSATLNAAAATFNRIDVRRPSLKLSATASMVNITELSAFTERGILQATAAVSQ LPQRQVNLSFTGRGVPLNILQAWGWPSLPISGDGNLQLTASGSVQADAPLKPTVNGQLSA VNMEKQQVAQIMRNGEVSPAPAAPQ >gi|289775432|gb|GG745511.1| GENE 126 137280 - 138671 1789 463 aa, chain - ## HITS:1 COG:STM3747 KEGG:ns NR:ns ## COG: STM3747 COG2233 # Protein_GI_number: 16767032 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Salmonella typhimurium LT2 # 1 462 1 462 463 743 92.0 0 MSVNTAESENAQPVAHKSASELIYRLEDRPPLPQTLFAAFQHLLAMFVAVITPALLICQA LGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKT GGADVPTMMAALFGTLMLASCTEMVLSRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTS IGGGYAAMADHTFGAPKNLLLAGIVLALIIILNRQRNPYLRIASLVIAMAAGYLAAWFLD MLPANTAPTNSSLITVPTPLYYGLGIDWSLLLPLMLVFMITSLETIGDITATSDVSEQPV SGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLI VLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGL GVSQQPLILQFAPDWLKNLLSSGIAAGGITAIVLNLIFPPEKA >gi|289775432|gb|GG745511.1| GENE 127 138956 - 140158 1841 400 aa, chain + ## HITS:1 COG:ECs4529 KEGG:ns NR:ns ## COG: ECs4529 COG0786 # Protein_GI_number: 15833783 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Escherichia coli O157:H7 # 1 400 1 400 401 546 87.0 1e-155 MFHLDTLSTLVAATLVLLLGRKLVQTVPFLKKYTIPEPVAGGLLVALALLVLKKSMDIEI DFDMSLKDPLMLAFFATIGLNANLASLRAGGKVLGTFLIVVVGLLLLQNALGIGMATLLG LDPLMGLLAGSITLSGGHGTGAAWSKLFVERYGFANATEVAMACATFGLVLGGLIGGPVA RYLVKHSSSPDGTPDDQVAPTAFEKPDVGRVITSLVLIESIALIAICLTVGKVVAQLLAG SVFELPTFVCVLFIGVILSNSLALAGLYRVFDRAVSVLGNVSLSLFLAMALMSLKLWELA SLALPMIIILAVQALAMALYAVFVTYRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLLLPMFG >gi|289775432|gb|GG745511.1| GENE 128 140273 - 141784 2260 503 aa, chain - ## HITS:1 COG:STM4086 KEGG:ns NR:ns ## COG: STM4086 COG0554 # Protein_GI_number: 16767352 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Salmonella typhimurium LT2 # 1 502 1 502 502 988 95.0 0 MTDKKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPGWVEHDPMEIWASQSST LVEALAKADINSDQIAAIGITNQRETVVVWERETGKPIYNAIVWQCRRTAEICEQLKRDG MEEYIRKATGLVVDPYFSGTKVKWILDHVEGSRERAKRGELLFGTVDTWLIWKMTQGRVH VTDYTNASRTMLFNIHELDWDDKMLDALDIPRAMLPEVRKSSEVYGQTNIGGKGGTRIPI AGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVTSTHGLLTTIACGPRGEVN YALEGAVFMAGASIQWLRDEMKLISDAFDSEYFATKVKDTNGVYVVPAFTGLGAPYWDPY ARGAIFGLTRGVNSNHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER NYRYSGWKKAVKRALAWEEHDEA >gi|289775432|gb|GG745511.1| GENE 129 141806 - 142657 940 283 aa, chain - ## HITS:1 COG:STM4087 KEGG:ns NR:ns ## COG: STM4087 COG0580 # Protein_GI_number: 16767353 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Salmonella typhimurium LT2 # 1 283 1 281 281 482 89.0 1e-136 MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISIIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFDGRKVVPFIISQFAGAFCAAALVYGLYYNLFLDYETTHH MVRGSVESLDLAGIFSTYPNPHINFVQAFAVEMVITAILMGVILALTDDGNGVPRGPLAP LLIGLLIAVIGASMGPLTGFAMNPARDIGPKAFAWLAGWGDVAFTGGKDIPYFLVPLCAP VVGAALGAFSYRKLIGRHLPCDTCVDEEQQSPSSSTTQHKASL >gi|289775432|gb|GG745511.1| GENE 130 143106 - 143345 541 79 aa, chain + ## HITS:1 COG:STM4088 KEGG:ns NR:ns ## COG: STM4088 COG3074 # Protein_GI_number: 16767354 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 79 1 79 79 77 89.0 6e-15 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKE QQQGWQDRLQALLGRMEEV >gi|289775432|gb|GG745511.1| GENE 131 143497 - 144486 1546 329 aa, chain + ## HITS:1 COG:sbp KEGG:ns NR:ns ## COG: sbp COG1613 # Protein_GI_number: 16131755 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 613 92.0 1e-175 MNKWGVGLTLLLASASVLAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKNWLKRLPDNSAPYTSTIVFLV RKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHQNHGDQAKAQEFVKA LYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEP TVSVVDKVVDKKGTRQVAEAYLKYLYSPEGQEIAAKNFYRPRDPNVAKKYANEFPKLKLF TIDQEFGGWTKAQKEHFSNGGTFDQISQR >gi|289775432|gb|GG745511.1| GENE 132 144820 - 145584 1081 254 aa, chain + ## HITS:1 COG:STM4064 KEGG:ns NR:ns ## COG: STM4064 COG2134 # Protein_GI_number: 16767330 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Salmonella typhimurium LT2 # 1 252 1 250 251 387 73.0 1e-107 MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNL KGGYVLFKDRNGPLQYLLMPTYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVP DNAISLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAAVSSRWLPLPGGLQGHEYLAR RVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE EIQDHRCAILNANH >gi|289775432|gb|GG745511.1| GENE 133 145649 - 146953 1832 434 aa, chain + ## HITS:1 COG:MTH788 KEGG:ns NR:ns ## COG: MTH788 COG0471 # Protein_GI_number: 15678812 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Methanothermobacter thermautotrophicus # 20 403 28 413 443 70 23.0 7e-12 MSLWLTHPLFLPSLIVGVTIVLWATSLLPEFITALLFFAAAMMAKIAPPEVIFGGFASSA FWLVFSGFVLGIAIRKTGLADRAAQALSARLTDSWPRMVGSVVLLSYALAFVMPSNMGRI ALLMPIVAAMARRAGIVDGSRGWFGLALAVGFGTFQLSATILPANVPNLVMSGAAEGSYG IHLNYVPYLLLHTPVLGWLKGAVLVALICRLFPGKPHPPRDLAPLPPMSRDEKRLAWLLA VVLTLWVTESWHGVGPAWTGLAAAVVTLLPRVGFINGEEFASGVNMRTCIYVAGILGLAI AVTQTGIGGAVGNALLQVMPLDKDNPFTSFLALTGITSALNFIMTANGVPALYTTFAQSF ADATGFPLLSVIMIQVLGYSTPLLPYQASPIVVAMGLGKVPARAGMQLCLALAAVSYLIL LPLDYAWYQLLGKL >gi|289775432|gb|GG745511.1| GENE 134 147046 - 147813 824 255 aa, chain - ## HITS:1 COG:STM4081 KEGG:ns NR:ns ## COG: STM4081 COG0149 # Protein_GI_number: 16767347 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 255 1 255 255 436 95.0 1e-122 MRHPLVMGNWKLNGSRHMVNELVANLRTELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIH LGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGVVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKADAKIAEQVIIQYGGSVNAGNAAELFTQPDIDGALVGGASLKAD AFAVIVKAAEAAKKA >gi|289775432|gb|GG745511.1| GENE 135 147923 - 148486 767 187 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0097 NR:ns ## KEGG: Kvar_0097 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 187 13 199 199 336 100.0 4e-91 MGLTVGPHALSAESESATAAPYLLSGAPSFDLSISQFREKFNADNPKLPLNEFRSIATSR DQANLTRAASKINENLYASTALERGTLKIKSMQITWLPIQGPEQKAAKAKALEYMSAMIR AFVPTLSPAQSQQKLQKLLTAGKGKRYFADTEGAVRYVVADHGEKGLTFAIEPIKLALSE TLEGNNK >gi|289775432|gb|GG745511.1| GENE 136 148635 - 149063 633 142 aa, chain + ## HITS:1 COG:ECs4846 KEGG:ns NR:ns ## COG: ECs4846 COG3152 # Protein_GI_number: 15834100 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 146 204 80.0 3e-53 MTLQQWLFSIKGRIGRRDFWIWIAIWLVTMSALFTLAGSNLLNLQTAAFIIVCLLWPTAA VVVKRLHDRGKSGLWALLMILAWMLLAGNWAMLPQVWQWGVGRFVPTLIIVMMLIDLGAF VGTQGENKFGKETQDVRWKADA >gi|289775432|gb|GG745511.1| GENE 137 149064 - 149810 1229 248 aa, chain - ## HITS:1 COG:ECs4849 KEGG:ns NR:ns ## COG: ECs4849 COG1018 # Protein_GI_number: 15834103 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 451 87.0 1e-127 MADWVSGKVTKVEYWTDALFSLYVRAPVHPFTAGQFTKLGLEIDGERVQRAYSYVNAPGN PDLEFYLVTVPEGKLSPRLAALKPGDEVLVVSEAAGFFVLEEVPDCDTLWMLATGTALGP YLSILQEGKDLERFNNLVLVHAVRYAADLSYLPLMRELEQRYAGKLRIQTVVSRETVEGS LTGRVPFLIETGALEEAVGLPMTTDTSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPG HMTAEHYW >gi|289775432|gb|GG745511.1| GENE 138 149961 - 150971 1487 336 aa, chain - ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 336 1 336 336 579 91.0 1e-165 MKRELAIEFSRVTEAAALAGYKWLGRGDKNTADGAAVNAMRIMLNLVNIDGTIVIGEGEI DEAPMLYIGEKVGTGKGDAVDIAVDPIEGTRMTAMGQANALAVMAVGDKGCFLNAPDMYM EKLIVGPGAKGAIDLNLPLEENLHNIARALNKPLGELTVTVLAKPRHDAVIAQLQQLGVR VFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMQGRLLARHHVKG DNEENRRIGENELARCKTMGIEAGKVLRLDEMARSDNVVFSATGITKGDLLDGITRKGNM ATTETLLIRGKSRTIRRIQSIHYLDRKDPDIQQHIL >gi|289775432|gb|GG745511.1| GENE 139 151022 - 153103 2615 693 aa, chain - ## HITS:1 COG:STM3744 KEGG:ns NR:ns ## COG: STM3744 COG1200 # Protein_GI_number: 16767029 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Salmonella typhimurium LT2 # 1 693 1 693 693 1254 94.0 0 MSGRLLDAVPLSSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIAELLPGV YATVEGEVLNSNITFGGRRMLTCQISDGTGILTMRFFNFNAAMKNSLATGRRVLAYGEAK RGKYGAEMIHPEYRVQGDMSTPELQETLTPVYPTTEGIKQATLRKLTDQALELLETCAIS ELLPPELAQGMMSLPEALRTLHRPPPSLQLSELESGKHPAQQRLILEELLAHNLSMLALR AGAQRYHALPLGANDTLKNQLLASLPFKPTGAQARVTAEIEHDMALDVPMMRLVQGDVGS GKTLVAALAAVRAIAHGKQVALMAPTELLAEQHANNFRSWFEPLGIEVGWLAGKQKGKAR QAQQEAIASGEVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH PHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACT HEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFK QGEMHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPD VQRIARHIHERYPLQAQALIERWMPETERYSNA >gi|289775432|gb|GG745511.1| GENE 140 153109 - 153798 739 229 aa, chain - ## HITS:1 COG:ECs4526 KEGG:ns NR:ns ## COG: ECs4526 COG0566 # Protein_GI_number: 15833780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 227 1 227 229 407 91.0 1e-113 MNSKRYERICEMLARRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTM ASAAAGSNSWVQVKTHRTIADAVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQ EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQRANSMLPP EEQQRLLFEGGYPVLARVARQKGLPYPHVNEQGEVEADDAWWATMQATR >gi|289775432|gb|GG745511.1| GENE 141 153803 - 155923 2421 706 aa, chain - ## HITS:1 COG:STM3742 KEGG:ns NR:ns ## COG: STM3742 COG0317 # Protein_GI_number: 16767027 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Salmonella typhimurium LT2 # 1 706 1 703 703 1368 97.0 0 MYLFESLNQLIQNYLPEEQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMK LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHL YSIYCKMVLKEQRFHSIMDIYAFRVIVHDADICYRVLGQMHSLYKPRPGRFKDYIAIPKA NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGGESSTTAQIRAQRWM QSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGH ACVGARVDRQPYPLSQPLSSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKR DDSVSLGRRLLNHALGGSRKLAEIPPENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAK NLQQGEAAAAPVPANASNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHH ESCRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVDMFNHQGALANLTAAINTASSNIQS LNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN >gi|289775432|gb|GG745511.1| GENE 142 155942 - 156217 407 91 aa, chain - ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 112 100.0 2e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN NQILDVRERQEQQEQEAAELQAVTAIAEGRR >gi|289775432|gb|GG745511.1| GENE 143 156272 - 156895 648 207 aa, chain - ## HITS:1 COG:STM3740 KEGG:ns NR:ns ## COG: STM3740 COG0194 # Protein_GI_number: 16767025 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 381 93.0 1e-106 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRAPRPGEVHGEHYFFVNHD EFRSMIGENAFLEHAEVFGNYYGTSRKAIEQVLATGVDVFLDIDWQGAQQIRKSMPGARS IFILPPSKDELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALSDLK NIIRAERLRMSRQKQRHGALITKLLAD >gi|289775432|gb|GG745511.1| GENE 144 157153 - 158832 1129 559 aa, chain + ## HITS:1 COG:yicF KEGG:ns NR:ns ## COG: yicF COG0272 # Protein_GI_number: 16131518 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 13 559 16 560 562 601 56.0 1e-171 MRKGGWWLALGMFSASALATCPEWPPARGRQEISRLHQQIVAWKEDYWRQGASEVSDEVY DQLTLRLAQWRQCFPGATPEDDDLPPPTGDTRHPVAHTGVRKLADEASVAHWMKNKADLW VQPKVDGVAVTLVYRQGSLVQAISRGDGLRGEAWTARARQIPALAKLTTGELANSVLQGE LFLRREGHIQQQAGGMNARAKVAGLMMRADAAAAPLSQLDVFIWAWPDGPSDMRRRQQLL AQAGFGYSGQYTHSVTRVEQVAQWRQRWYRSPLPFVSDGVIVREGHEPPGRVWSPGKGEW LAAWKYPPASQVMEVRAIHFSTGRSGRLNVVAQLEPQRLDDKRVQRVNVGSVARWQALDI GVGDQLQISLAGQGIPRIDAVVWRTAERHKPTPPAAKFNALTCYFATPECSEQFLSRLIW LSSKSALDVDGVGEHLWRAIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHLWHQFDL VRKRPFIRWVLAMGLPVPQGALAQLESENWHLLAAKSEAQWRALPGVGEIRARQLVAFLH HPDVVALAQWLSGQRIPGF >gi|289775432|gb|GG745511.1| GENE 145 158838 - 159455 641 205 aa, chain - ## HITS:1 COG:yicG KEGG:ns NR:ns ## COG: yicG COG2860 # Protein_GI_number: 16131517 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 205 19 223 223 297 85.0 7e-81 MLLHVLYLIGITAEAMTGTLAAGRRRMDTFGVIIIATATALGGGSVRDILLGHYPLGWVK HPEYVIIVAVAAVLTTIAAPVMPHLRRLFLVLDALGLIVFSIIGAQIALDMGEGPIIASI AAVITGVFGGVLRDMFCKRIPLVFQKELYAGISFAAAVLYIALQHYVSSHDVVVLATLLF GFTARMLALRWKLGLPVFHYTHDSH >gi|289775432|gb|GG745511.1| GENE 146 159731 - 160990 982 419 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 35 406 1 370 380 252 43.0 9e-67 MSVAAGNKNNLTRLIAVVLTGILAGLSGMVLALILHAIQHLAFGYSAGQIVGSVSFLQGV TESSWPRRIAAIVAGGGVAGFGWWLLGRYGQKRVSIAAAVANPSVPMPAGTTTIHALLQI VTVALGSPLGREVAPREMGALGAGMVARKLGLLEDETRTLIACGAGAGLAAVYNVPLAGA LFSLEVMLLSFSWEKTLAAIMTSAIAAWTATLGLGDESQYHFVSSTLPHSFLWWAILAGP ILGTGAWLFRKATSAARSRVRSNWQMPVFCLLGFSLLAILSLYFPELPGNGKGPMQLALS DGLPLSMVAILLVLKMVVILAVLRGGAEGGLLTPGLAVGGLVSLLLCALWQLGFPGGDKS SFALVGAAAFLAASMQMPLTAVVLVMEFTHMDHSYLAPALLCAAGAFLTCRILDKKYFF >gi|289775432|gb|GG745511.1| GENE 147 161040 - 161903 1256 287 aa, chain - ## HITS:1 COG:ECs4519 KEGG:ns NR:ns ## COG: ECs4519 COG1561 # Protein_GI_number: 15833773 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 439 94.0 1e-123 MIRSMTAYARREIKGDWGSAAWELRSVNQRYLETYFRLPEQFRSLEPVVRERIRARLTRG KVECTLRFEQDPSAQGELILNEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAKE QDLDAIAADILAALDGALDDFIVARETEGQALKALIEQRLEGVSGEVTKVRAHMPEILQW QRERLVAKLEDAEVQLENNRLEQELVLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE >gi|289775432|gb|GG745511.1| GENE 148 162546 - 164246 39 566 aa, chain + ## HITS:1 COG:VCA0646 KEGG:ns NR:ns ## COG: VCA0646 COG3176 # Protein_GI_number: 15601404 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Vibrio cholerae # 42 478 61 511 605 207 28.0 3e-53 MNAIFDRVIREFFPDTHIPHWKKWVFRAAFGNKVFSRLINDERLINKNGVYWVSSVVDFF NVRCETEYSDFNNIPRQGATVVISNHPTVMDGIALIHTIAQVRKDIKIVANHILPMIFPQ VAELTIGIENMAGKMSHKKFREMNDHLKNGGVLIICPAGKLASWSLSGLQEHQWNPGFLQ LAMRNNAALVPVHITGSNSKTYYLAATVWRQLSNIMIIREALRHRGKTMKIKVGQQIALS SFNRFNKDLSAASSVCLMHLQSIGENGPALVDTVSPQQLTGSRESLINAIEECEVLRQFD DGRKLLIFRCNTLGDSPIIDELGRLRERCYRDIGAGSGKDRDNDVFDETYYHVILWDPSD EEILGAYRLIPVGEQLAQHGITGLYSNSLFKYHNNAYSCLIQCVEIGRGFIQKPYQKSNV LDYLWRGIFDFIKRYPDYKYLLGVLTIPGSFPEEVQKLIVSFYNMYFPSSVNFCTPIQLF TAEGAQSDSPFSGNDFRDDWRVLNDLLREKGYELPWPFKQSAKWFSPGGSSILAFTKDDA FHSIAGLNLSALDKLNEIYFKHYLKD >gi|289775432|gb|GG745511.1| GENE 149 164372 - 165298 209 308 aa, chain + ## HITS:1 COG:RSc0163 KEGG:ns NR:ns ## COG: RSc0163 COG0845 # Protein_GI_number: 17544882 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 5 302 11 308 311 197 38.0 1e-50 MLMITGCDNKPENRLSGYSHGEFVYLSYSSTAKIEQLFIKKGDNVTPGQELVKIESFDAQ NIFLRAEEKLSAESALLRNLESGERPEELDIIRAQIKKARSAESQVKRQLERYRNLYASR AISLAEWEDIRDELTQKGAQVEELINQLKARQLPARQDEISKQLSMVAAAKLERDKALWD VQQTTIVSPVNAKVFDIIYRAGERPTAGRPIISLLPPENIKVRFFIPEAMLGKFKIGTKV KLICDGCAEPIAGVINYISPEAEFTPPVIYSTKRREKLIFMAEAVPARKQAERMKIGQPF DVEVIGNE >gi|289775432|gb|GG745511.1| GENE 150 165291 - 166208 387 305 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 298 7 308 318 153 32 9e-36 MNNLCIDVKNLNKYFGEHHVVKDFSLQVAKGEIYGFLGPNGSGKTTSIRMMCGLITPDSG EGSCLGMDIFTQREKIKKKIGYMTQYFSMWGNLTIRENLLFIARLYSLDQRKARVERALS ELGLTTRQHQQARELSGGWKQRMALAACMLHEPVLLFLDEPTAGVDPKARREFWQMLHQL SDRGISILVSTHYMDEAERCHKVAYLSYGRLLANGTISSIIASQNLITMRTSGTGLTLLE NQLQRLPDIEQTVIFGNQLYITSRDEAKLKSTLFAFTQQGYEFCQVATNLEDAFTYLMKN DCEKN >gi|289775432|gb|GG745511.1| GENE 151 166195 - 167334 761 379 aa, chain + ## HITS:1 COG:RSc0165 KEGG:ns NR:ns ## COG: RSc0165 COG0842 # Protein_GI_number: 17544884 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Ralstonia solanacearum # 8 379 8 381 381 351 45.0 2e-96 MKKINLSFSFTRWIGVVIKEIHELRRDKVSISMVLLTPIFQLIILGYAINMDPHNLPTAL LNYDTERMSHIFVTEAQNTGYFSMIPVDSEEAAQKAFVRGDVTFIVTIPEGFTRKMLRGE KPQLLIQGDAIDPITTGNALSALVQVAKSMFQHDLPGDMRISQKEDDFELIIHRMFNPEG ITQFNTIPGIMGSILSTTLILMTALSITRERENGALENLLVSPLTGFEVIVGKITPFVVI GLFQATLILIAAVLLFNIPLHGSVFLLFFVLLIYVFLCLSIGIGISGLAQNQLQALQMSS FYFIPSIMLSGFISPFISMPDWAKAIGSCLPLTYFIRLVKGIMLKGYSAMALLPDLLPLI GLAVIVIGVGLKSYRKTLD >gi|289775432|gb|GG745511.1| GENE 152 167430 - 168146 874 238 aa, chain + ## HITS:1 COG:STM3734 KEGG:ns NR:ns ## COG: STM3734 COG0689 # Protein_GI_number: 16767019 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Salmonella typhimurium LT2 # 1 238 1 238 238 405 96.0 1e-113 MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIDEGVPRFLKGQGQGWIT AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ ADGGTRTASITGACVALADALNKLVAAGKLKTNPMKGMVAAVSVGIVNGEAICDLEYIED SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIITTQKAALEN >gi|289775432|gb|GG745511.1| GENE 153 168258 - 168899 984 213 aa, chain + ## HITS:1 COG:STM3733 KEGG:ns NR:ns ## COG: STM3733 COG0461 # Protein_GI_number: 16767018 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 395 92.0 1e-110 MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS GIEFDLLFGPAYKGIPIATTTAVALAEHHDRDLPYCFNRKEAKTHGEGGNLVGSPLQGRV MLVDDVITAGTAIRESMEIIQAQGAQLAGVLISLDRQERGRGEISAIQEVERDYGCQVIS IITLKELIAYLEEKPEMAEYLASVRAYREAYGI >gi|289775432|gb|GG745511.1| GENE 154 168937 - 169953 637 338 aa, chain - ## HITS:1 COG:RSp0824 KEGG:ns NR:ns ## COG: RSp0824 COG3386 # Protein_GI_number: 17549045 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Ralstonia solanacearum # 5 335 10 352 353 365 55.0 1e-101 MATSRRDLLKIGGLATASLLVSQKSFAAWAPSERYPDPRIVAVDDSFRRYMLASAKVERI ASGFRWAEGPVWFGDMRMLLWSDIPNNAIMRWDEISGETSVFRYPANYSNGHARDRQGRL ISCEHDTRRITRTEYDGSVTVLADSYQGKRLNSPNDIVVKSDGTIWFTDPPFGISGFYEG HKATPELPQNVYCLEPESRKLSVVLGDIKGPNGLCFSPDEKTLYVVESRATPNRLILAWD VEGNTLKNKRVYLDCGNGTADGIACDADGNLWCGWGSGNEELDGVRIFNPQGKHIGTIQL PERCANLCFGGEQRNRLFMASSTSIYSLYVNAQGAKLV >gi|289775432|gb|GG745511.1| GENE 155 170129 - 170725 739 198 aa, chain - ## HITS:1 COG:ECs4516 KEGG:ns NR:ns ## COG: ECs4516 COG1309 # Protein_GI_number: 15833770 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 198 15 212 212 332 95.0 2e-91 MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILKDEKDTTARLRLIVLLILGFGERNPGLTRILTGHALMFEQDR LQGRINQLFERIEVQLRQVMREKKMREGEGYTLDETLLASQLLAFCEGMLSRFVRSEFKY RPTDDFEARWPLVAAQLQ >gi|289775432|gb|GG745511.1| GENE 156 170850 - 171308 477 152 aa, chain - ## HITS:1 COG:STM3731 KEGG:ns NR:ns ## COG: STM3731 COG0756 # Protein_GI_number: 16767016 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Salmonella typhimurium LT2 # 2 152 1 151 151 282 94.0 2e-76 MMKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDDAVELAPGATTLLPTGLAIHIA DPSLAAVILPRSGLGHKHGVVLGNLVGLIDSDYQGQLMVSVWNRGQQSFIIEPGERIAQM VFVPVVQAEFNLVGEFDATDRGEGGFGHSGRK >gi|289775432|gb|GG745511.1| GENE 157 171286 - 172500 1183 404 aa, chain - ## HITS:1 COG:ECs4514 KEGG:ns NR:ns ## COG: ECs4514 COG0452 # Protein_GI_number: 15833768 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Escherichia coli O157:H7 # 1 404 25 430 430 695 90.0 0 MTLAGKKIVLGVSGGIAAYKTPELVRRLRERGAEVRVAMTEAAKAFITPLSLQAVSGYPV SDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPSPVAV VPAMNQQMYRAQATQQNLQTLASRGLLLWGPDSGSQACGDVGPGRMLDPLTIVEMAAQHF ASPVKDLQHLNLMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAAQRGANVTLVSGPVS LPTPPFVQRIDVTTALEMEAAVQAGAQQQHIFIGCAAVADYRAAVIAEDKIKKQGDELTI KMIKNPDIVAGVAALKAHRPYVVGFAAETNNVEEYARQKRARKNLDLICANDVSQPDQGF NSDNNALHLFWQDGEKRLPLERKELLGQLLLDEIVTRYDEKNRR >gi|289775432|gb|GG745511.1| GENE 158 172673 - 173338 530 221 aa, chain + ## HITS:1 COG:STM3729 KEGG:ns NR:ns ## COG: STM3729 COG2003 # Protein_GI_number: 16767014 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 330 75.0 2e-90 MDETENLMPREKMLQYGIEALTDVELLALFLRVGTRRQDVLGYAQALLQRFGSLYALLSA DKAQLIAVDGLGLAKYAQLKGIAELARRYFSSQLVEEAALVSPSTTREFLQSQLTEEERE IFMVIFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPS QADRLITERVVKCCRFMEIRVLDHLVIGRGAYVSFAERGWI >gi|289775432|gb|GG745511.1| GENE 159 173555 - 173791 403 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146309769|ref|YP_001174843.1| 50S ribosomal protein L28 [Enterobacter sp. 638] # 1 78 1 78 78 159 100 1e-37 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID KKGIDTVLSELRARGEKY >gi|289775432|gb|GG745511.1| GENE 160 173812 - 173979 282 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972482|ref|YP_001337628.1| 50S ribosomal protein L33 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 55 1 55 55 113 100 1e-23 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKMELKKYDPVVRQHVIYKEAKIK >gi|289775432|gb|GG745511.1| GENE 161 174115 - 174924 1033 269 aa, chain + ## HITS:1 COG:STM3726 KEGG:ns NR:ns ## COG: STM3726 COG0266 # Protein_GI_number: 16767011 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Salmonella typhimurium LT2 # 1 269 1 269 269 515 90.0 1e-146 MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKTL EDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG IHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK GEPCRICGTPVVGTKHAQRATFYCRQCQK >gi|289775432|gb|GG745511.1| GENE 162 175056 - 175535 378 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 6 157 7 158 164 150 46 1e-34 MSTKAIYPGTFDPITNGHIDIVTRAASMFDKVVLAIAASPSKKPMFTLDERIALATQATA HLVNVEVIGFSDLMASFARAQQANILIRGLRAVADFEYEMQLAHMNRHLMPTLESVFLMP CKEWSFISSSLVKEVARHQGDVSHFLPANVHQALLNKLK >gi|289775432|gb|GG745511.1| GENE 163 175538 - 176308 882 256 aa, chain - ## HITS:1 COG:YPO0054 KEGG:ns NR:ns ## COG: YPO0054 COG0463 # Protein_GI_number: 16120407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 4 254 6 256 260 358 70.0 5e-99 MSNRLSVVMIAKDAADLLPDCLDSVSWADEIIVLDSGSTDNTVELARRLGAQVYTHTDWR GYGIQRQRAQDYATGDWVLMIDTDERVTPELRQAILKVLAAPQRGAIYSIARRNYFLGRF MRHSGWYPDRVLRLYERARYRYNDNLVHESLDSLGAEVIPLTGDLLHLTCRDFAGFQQKQ LAYAAAWALERHRKGKKTSMAGIFSHTLGAFLKTLLLRGGVLDGKQGWLLAMVNAQYTFT KYTELWALSHGYSEKG >gi|289775432|gb|GG745511.1| GENE 164 176308 - 177582 1644 424 aa, chain - ## HITS:1 COG:YPO0055 KEGG:ns NR:ns ## COG: YPO0055 COG1519 # Protein_GI_number: 16120408 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Yersinia pestis # 4 424 5 425 425 703 81.0 0 MELLYTTLLYLIQPLVWLRLLLRSRKAPAYRKRWAERYGFCQNKVEPDGILLHSVSVGET LAAIPLVRALRHRYPSMPITVTTMTPTGSERAMSAFGKDVHHVYLPYDLPGAMNRFLNTV QPKLVIVMETELWPNMVAALHKRKIPLVIANARLSERSAKGYAKLGGFMRRLLSRITLIA AQNEEDGNRFLALGLKRNQLAVTGSLKFDISVTPELAARAITLRRQWAPHRKVWIATSTH DGEEQIILQAHKKLLETFPNLLLILVPRHPERFPDAREMVQKAGMSFTLRSTGEIPSSST QVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEPAAHAIPVLMGPHTFNFKDICAK LQQDDGLITVTDADSLVREVSTLLTDEDYRLWYGRHAVEVLHQNQGALSRLLKLLQPYMP QRSH >gi|289775432|gb|GG745511.1| GENE 165 177674 - 178663 1085 329 aa, chain - ## HITS:1 COG:ECs4493 KEGG:ns NR:ns ## COG: ECs4493 COG0463 # Protein_GI_number: 15833747 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 326 2 327 338 229 37.0 4e-60 MSQTPLLSIVAAVYNGEKFLAQFFECLEQQQLESYELILVNDGSTDNSLAVIAEWRDRLQ NVQVLEQENQGVSVARNTGLAAASGKYLAFPDIDDKLYPGMYRTLLEMAEKEHLDIATCN GTYVYEKRRESHPIFPLDRLPSTGVLPGHVWLKQALDSRKFLHVTWLNIYRHDFIRQHHF HFEPGLRHQDIPWTTEALLAAERVQYTSQQFYDYYIHSESVSHKPDNDDTLMRSARHYMK ILEMLEAINQRYPDKVRHIAACRWQIAKEGLGIIHTFDSMKDESKKHVIIKEFFDRGIWR LIWKNACTFRLRWRLGRRYLRIKRYRHAV >gi|289775432|gb|GG745511.1| GENE 166 178693 - 179787 1301 364 aa, chain - ## HITS:1 COG:BH3663 KEGG:ns NR:ns ## COG: BH3663 COG0438 # Protein_GI_number: 15616225 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus halodurans # 1 311 4 307 373 116 30.0 6e-26 MRILFVIDGLPGGGAEKVVLTLAAQFLRDGDRVSLISLRDVCEYPLPEGLDYQVVADRCR KPWRKLTELSRRARQLDAAVIRAEQQGQFDLVLSNLHKTDRIVARSRALRERNVWFCLHG VFSASYLGHRTGFDRWMKQQKIKRIYQGRNVVAVSDAVGRDLVEAFALRPAQLKTIYNPF DIATLRAEAEAESERPAGDYLIHVGRFHPGKRHDRLLEAYAQSGIDAPLVLLGQGKPEQE QRLRQLAKTLQVDDRVWFKGFQKNPLPWIKGARMLVLSSDSEGFGNVVVEALLLHTPVAS TRCPGGVTEILTGELARGLADLTSPALAQTMQSIYHNPPTIDDAALEKFSVVSICQQYRQ LQRT >gi|289775432|gb|GG745511.1| GENE 167 179790 - 180917 1558 375 aa, chain - ## HITS:1 COG:STM3722 KEGG:ns NR:ns ## COG: STM3722 COG0438 # Protein_GI_number: 16767007 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Salmonella typhimurium LT2 # 5 342 2 335 374 102 28.0 2e-21 MSKFRLALVRQKYRPDGGAERFVSRALEALDSSHLQLNVITREWQGPVKPDWQIHICNPR KWGRISRERGFANAARALWQRESFDLVQSHERIPGCDLYRAGDGVHRRWLQQRSRILPAW KSRLLFADRYHRYVMQAEREMYEDSHLRGVICNAEMIKREIIEDFGLPAEKIHVIYNAID NQRFLPPGEDTFAALRAKWQLPLQATCLIYVGSGFERKGLAAAIRAIAPTDRYLLVVGKD KDQPRYQALAKSLGCEARVRFFGMQSETLPFYQMADGLLLPTLYDPFPNVILEAMACGLP VITTTGCGGAEFIVDGHNGYVCDALDIPALQQAVMALPARALGSAQGGRARERIMACTSE RLSTQLLSLYQDLVK >gi|289775432|gb|GG745511.1| GENE 168 180914 - 181990 1105 358 aa, chain - ## HITS:1 COG:ECs4507 KEGG:ns NR:ns ## COG: ECs4507 COG0859 # Protein_GI_number: 15833761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 15 357 7 343 352 289 45.0 5e-78 MTPETLSRGPLNPARILVIKLRHHGDMLLITPLIHALKQQYPAASVDVLLYEETRDMLAA NPDIHHIYGLDRRWKKQGKRHQLKMQWQLIQTLRQQRYDMVLNLADQWPSAIISKLTGAA TRIGFDFPKRRHPFWRYCHTALASTQQHNQLHTVQQNLSILAPLGLPLNDAPARMGYSEA DWTTSRALLPEEFRENYIIIQPTSRWFFKCWREDRMSALINALSAEGYAVVLTSGPDDRE KKMVDTIIAGCPQARLHSLAGQLTLRQLAAVIDHARLFIGVDSVPMHMAAALGTPLVALF GPSKLTFWRPWQAKGEVIWAGDFGPLPDPDDINTNTEERYLDLIPTDAVIAAAKKVLA >gi|289775432|gb|GG745511.1| GENE 169 182102 - 183064 830 320 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0133 NR:ns ## KEGG: Kvar_0133 # Name: not_defined # Def: WalW protein # Organism: K.variicola # Pathway: not_defined # 1 320 1 320 320 655 99.0 0 MHNPAFLITIDTEGDNLWQKHDSITTENARYLPRFQQLCEKYGFKPVYLTNYEMAIDPFY IEFARDVIARGTAEVGMHLHAWNSPPTEPLTADDWRHKPYLIEYSDAMMREKVDYMTHLL EDTFQTKMVSHRAGRWAFDERYARLLVEHGYQVDCSVTPRVNWKTAKGAPQGDGGTDYRR FPQHAYFLDENDISREGHSPLLEVPMSIQYKHSAWMNSLKQGYDRLRGKVRSPSVHWLRP MGGNVETMKKVVEQTLTQGNDYVEYMLHSSEYMPGGSPTFQNERDIERLYADLEAFFSWL APQVKGMTLAEYYQRKITQR >gi|289775432|gb|GG745511.1| GENE 170 183083 - 184162 776 359 aa, chain + ## HITS:1 COG:rfaK KEGG:ns NR:ns ## COG: rfaK COG0859 # Protein_GI_number: 16131494 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 4 348 3 349 357 104 26.0 2e-22 MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTT GCARILAERGYQVSVLTGPICCEILAGSEFIQQVYLYRPRMSLNTLRAVGFDAVIDFDDV TSYERFKLLADLRAASVIGFNKDQYKLYDHSIAFFDSNSHISQRYKQVVKLFGIVDDHPY HYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLRALPYRV CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVA VYNKRKLKDTGLPGYHIWAPGYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS >gi|289775432|gb|GG745511.1| GENE 171 184206 - 185375 1667 389 aa, chain - ## HITS:1 COG:PA4999 KEGG:ns NR:ns ## COG: PA4999 COG3307 # Protein_GI_number: 15600192 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Pseudomonas aeruginosa # 255 379 252 379 401 67 28.0 7e-11 MSTLKVSNFARQGYSIVFPLFLFFSAIFCMSTRTNNLLHLSILLLLLSLVRQENRQALAG LLREQWQTWTLLAAFFIYYALSNLWGHTPQHIDSPITHGVYLTGYLLLMTMLLSDERTRR LAMLAVVGGITVLSLWTLIIDHTLVLTERAVSPENPGPTNVIDLAGYCGIGILICGMLLK EKASHWLYLPVVIMLVMLLLTQSRGPIIALVLAVGCTLHLHVFTRRNLLIAAALAVLVAL LLVMTPVGDMLLARFEELGTQSGLRLSIWHHTLSEMASQPWLGRGFSYELDFINYSGEHI TTTHSVYMGALLKGGILGLLLLLAVIACGLWQAWRKRHTDSRYSLAILFYALVFMASQGM FIISNPRETWVLFWLPLGIALSKGLAEKR >gi|289775432|gb|GG745511.1| GENE 172 185353 - 186261 761 302 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0136 NR:ns ## KEGG: Kvar_0136 # Name: not_defined # Def: lipopolysaccharide core biosynthesis protein RfaZ # Organism: K.variicola # Pathway: not_defined # 1 302 1 302 302 625 99.0 1e-178 MGSLFKQIYRYTRPRAYRHNENLWPFTRITRAPSGEISALRYKGKMVPLVSLSALKNSMQ GEVLLTATGPSTRNIDFSLLSKTIPVMGVNGAWHLADRLHFSLYTIVDMEFFDKKPDIIR AIVSQPEILLFTTMHGIAKILDRYGDALRCRLALIEDGCYKIYQPKVASEAIKRTYQQNA AMCFHPQRPDICFSTDIRQGIFDAGTVVYWALQILAWLGFNTILVSGLDMTNFNQPRFYE TQQEKLPSYLATKVDTLVMPSFAHAAQVLQQRQIRVINFSPESAVPDTIFEKVAFNEYFK SE >gi|289775432|gb|GG745511.1| GENE 173 186261 - 187202 1057 313 aa, chain - ## HITS:1 COG:ECs4499 KEGG:ns NR:ns ## COG: ECs4499 COG0859 # Protein_GI_number: 15833753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 303 11 312 330 494 82.0 1e-139 MGDVLHTLPALTDAAQAIPGIRFDWVVEEGFAQIPSWHESVERVIPVAIRRWRKAWFSAP IKAERQAFREAVQAVKYDAIIDAQGLVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNR RHHIAKQQHAVERTRELFAKSLGYAKPQTQGDYAIARHFLQHEASAAAPYLVFLHATTRD DKHWPETRWQELLDLLADSGVRIKLPWGAPHEEARAKRLAEGREYVEVLPRMSLEQVAQV LASARAVVSVDTGLSHLTAALDKPNFTLYGPTDPGLIGGYGKNQHIVRPENSTSTSDIPA SRVHLLLQNQGLL >gi|289775432|gb|GG745511.1| GENE 174 187236 - 188294 1303 352 aa, chain - ## HITS:1 COG:STM3711 KEGG:ns NR:ns ## COG: STM3711 COG0859 # Protein_GI_number: 16766996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Salmonella typhimurium LT2 # 1 346 1 346 348 645 88.0 0 MKILVVGPSWVGDMMMSQSLYRTLRARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG HGALAIGERRKLGHSLRERRYDRAYVLPNSFKSALVPFFANIPLRTGWRGEMRYGLLNDA RVLDKDAWPLMVERYVALAYDNGVMRCAKDLPQPLLWPQLQVNDGEKSQACNAFNLSNER PIIGFCPGAEFGPAKRWPHYHYAALAKKLIDDGYQIALFGSAKDNEAGKEIIAALSSEQQ AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH KARVIRLISGYHKVRKGDAAEGYHQSLIDITPERVLQELNELLAEKTEHEEA >gi|289775432|gb|GG745511.1| GENE 175 188303 - 189235 1387 310 aa, chain - ## HITS:1 COG:ECs4497 KEGG:ns NR:ns ## COG: ECs4497 COG0451 # Protein_GI_number: 15833751 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 609 97.0 1e-174 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVADVNLWFWENGVSGIFNLGTGRA ESFQAVADATLAFHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRKAGYDKPFKTVAEGVT EYMAWLNRDA >gi|289775432|gb|GG745511.1| GENE 176 189449 - 190642 1777 397 aa, chain + ## HITS:1 COG:ECs4495 KEGG:ns NR:ns ## COG: ECs4495 COG0156 # Protein_GI_number: 15833749 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 397 1 398 398 736 93.0 0 MRGDFYKQLTSNLETARAEGLFKEERIITSAQQADITVGDSHVINFCANNYLGLANHPEL IAAAKSGMDSHGFGMASVRFICGTQDTHKQLEKKLADFLGMEDAILYSSCFDANGGLFET LLGPEDAIISDALNHASIIDGVRLCKAKRFRYANNDMQELEACLKEAREAGARHVLIATD GVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT LGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEEGADLRDR LWANARLFREKMTAAGFTLAGADHAIIPVMLGEAVVAQNFARELQKEGIYVTGFFYPVVP KGQARIRTQMSAAHTPEQIERAVEAFTRIGKQLGVIA >gi|289775432|gb|GG745511.1| GENE 177 190655 - 191680 1521 341 aa, chain + ## HITS:1 COG:tdh KEGG:ns NR:ns ## COG: tdh COG1063 # Protein_GI_number: 16131487 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 341 1 341 341 696 96.0 0 MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMV VGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGC FAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGVMAA AVAKHVGARNVVITDVNEYRLELARKMGVTRAVNVAKENLNDVMAELGMTEGFDVGLEMS GAPPAFRSMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAA LIQSGLDLSPIITHRFGIDDFQKGFDAMRSGQSGKVVLSWE >gi|289775432|gb|GG745511.1| GENE 178 191850 - 192638 773 262 aa, chain + ## HITS:1 COG:FN0542 KEGG:ns NR:ns ## COG: FN0542 COG0463 # Protein_GI_number: 19703877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 2 243 5 244 263 105 26.0 7e-23 MLKLSVCLLTCNSARLLMEVLPPLLKVADECIIVDSGSTDETVSICQQFGLTVHHHAYKA HGAQMNYAIGLASHDWVLCMDSDEILDNDVVAAIQALKAGEEPDPTCAWRLPRYWFVLGT QVRTIYPISSPDYPVRLFNRQQARFNDRPVDDQVVGHARSVRLPGFVRHDTFYSLHEVFN KLNSYTTRLVKYQQIKPSLTRGIVSAIGAFFKWYLFSGAWRYGKVGVVTGLYATFYSFLK YFKAWYAHEDNQAPVAQKRTDP >gi|289775432|gb|GG745511.1| GENE 179 192644 - 193600 1070 318 aa, chain - ## HITS:1 COG:STM3706 KEGG:ns NR:ns ## COG: STM3706 COG2861 # Protein_GI_number: 16766991 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 313 1 306 320 469 78.0 1e-132 MLQFRAIALAVAGSLALAAPAFAGKLSIVIDDFGYRPQTENQVLALPSTISVAVLPNAPH AREMATKAHNLGHEVLIHLPMAPLSKQPLEKDTLRPEMSSEEIERIIREAYGKVPYAVGL NNHMGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD TQNEADIRTQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSSLLNE PQVDNSTPNYAQPPAQQTPPQQQKPRNPFHGVKYCKPKRPLEPVNASRFFTILSDSISQS ALVQYYRLKWQGWDNPGN >gi|289775432|gb|GG745511.1| GENE 180 193604 - 194875 1086 423 aa, chain - ## HITS:1 COG:ECs4491 KEGG:ns NR:ns ## COG: ECs4491 COG4942 # Protein_GI_number: 15833745 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Escherichia coli O157:H7 # 1 423 1 427 427 524 83.0 1e-148 MRGKATYSTTWIATAVRSVLYASALSAGVLLCASSAHADDRDQLKSIQADIAARQRAIKQ QQQQRASLLAQLKAQEEAIAAAARKLRETQDSLNQLNKQIDEMNASLAKLERQRASQERN LAAQLDAAFRQGPHTGIQMVLSGEEGQRNQRMQVYFSYFNQARQETIAELKKTREEMAVQ KSMLEEKQSQQQTLVYEQKAQQAKLEQARNERKKTLSGLESAIQQGQQQLSELRANESRL RGRIAQAEAAAKARADREARDAQAVRDRQQEASRKGTTYKPTESERSLMSRTGGLGSPRG QAFWPVRGPLLHRYGEQLQGELRWKGMVIAASEGTEVRAIADGRVILADWLQGYGLVVVV EHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPW LGR >gi|289775432|gb|GG745511.1| GENE 181 194885 - 196429 2037 514 aa, chain - ## HITS:1 COG:STM3704 KEGG:ns NR:ns ## COG: STM3704 COG0696 # Protein_GI_number: 16766989 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Salmonella typhimurium LT2 # 1 514 1 514 514 951 93.0 0 MSVSKKPMVLVILDGYGYREDQQDNAIYSAKTPVMDALWAKRPHTLIDASGLEVGLPDRQ MGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTAAVDKAVAAGKAVHIMGLMS PGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEKTLATFEAKFAALGKGR IASIIGRYYAMDRDNRWDRVEQAYDLMTLAKGEFQADTAVAGLQAAYARDENDEFVKATV IRAAGQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLDFVMLTEYAA DIKVACAYPPASLANTFGEWMAKHDKTQLRISETEKYAHVTFFFNGGVEEPFKGEERILI NSPKVATYDLQPEMSSAELTEKLVAAIKGGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA LDHCIDQVTQAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGNKAVKA VNGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE >gi|289775432|gb|GG745511.1| GENE 182 196675 - 197106 563 143 aa, chain + ## HITS:1 COG:STM3703 KEGG:ns NR:ns ## COG: STM3703 COG0607 # Protein_GI_number: 16766988 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Salmonella typhimurium LT2 # 1 143 1 143 143 255 90.0 2e-68 MQEIMQFIGRHPVLSIAWIALLGAVLFTTFKGLMSKVKVITRGEATRLINKEDAVVVDLR QRDDFRKGHIAGAINLLPADIKANNVGELEKHKSQPIIVVDGSGMQAQEPASALNKAGFE KVFVLKEGIAGWSGENLPLVRGK >gi|289775432|gb|GG745511.1| GENE 183 197211 - 197462 298 83 aa, chain + ## HITS:1 COG:STM3702 KEGG:ns NR:ns ## COG: STM3702 COG0695 # Protein_GI_number: 16766987 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 83 1 83 83 158 90.0 2e-39 MANIEIYTKATCPFCVRAKALLNSKGVTFHELPIDGDAAKREEMIQRSGRTTVPQIFIDA QHIGGCDDLYALDSRGGLDPLLR >gi|289775432|gb|GG745511.1| GENE 184 197523 - 197990 647 155 aa, chain + ## HITS:1 COG:ECs4487 KEGG:ns NR:ns ## COG: ECs4487 COG1952 # Protein_GI_number: 15833741 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 290 93.0 7e-79 MSEQNSTEMTFQIQRIYTKDISFEAPNAPQVFQKDWQPEVKLDLDTASTQLAEGVYEVVL RVTVTAALGEETAFLCEVQQGGIFSIDGIEGTQMAHCLGAYCPNILFPYARECITSLVSR GTFPQLNLAPVNFDALFMNYLQQQAGEGAEQHQDA >gi|289775432|gb|GG745511.1| GENE 185 197990 - 199009 1247 339 aa, chain + ## HITS:1 COG:ECs4486 KEGG:ns NR:ns ## COG: ECs4486 COG0240 # Protein_GI_number: 15833740 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 616 92.0 1e-176 MNALNAAMTVIGAGSYGTALAITLARNGHHVVLWGHDPKHIATLQHDRCNAAFLPDVPFP DTLHLESDLATALAASRDILVVVPSHVFGQVLRQIKPLMRPDARLVWATKGLEAETGRLL QDVAREALGDDIPLAVISGPTFAKELAAGLPTAISLAATDPQFAEDLQHLLHCGKSFRVY INPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVEMSRLGAALGADPETF MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQDKIGQVVEGYRNTKEVRVLAQRL GVEMPITEEIYQVLYCGKIAREAALTLLGRARKDERSSN >gi|289775432|gb|GG745511.1| GENE 186 199083 - 199904 1111 273 aa, chain + ## HITS:1 COG:STM3699 KEGG:ns NR:ns ## COG: STM3699 COG1045 # Protein_GI_number: 16766984 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 273 1 273 273 534 97.0 1e-152 MPCEELDIVWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPA IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WTQGRRALAIFLQNQVSVSFQVDIHPAAKIGRGIMLDHATGIVVGETAVIEDDVSILQSV TLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVP ARIVGKPESDKPAMDMDQHFNGIHHTFEYGDGI >gi|289775432|gb|GG745511.1| GENE 187 199986 - 200459 550 157 aa, chain - ## HITS:1 COG:STM3695 KEGG:ns NR:ns ## COG: STM3695 COG0219 # Protein_GI_number: 16766980 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 305 94.0 3e-83 MLNIVLFEPEIPPNTGNIIRLCANTGFSLHIIEPMGFTWDDKRLRRAGLDYHEFTAVQRH ADYAAFLASAQPQRLFALTTKGTPAHSAVSYQDGDFLMFGPETRGLPASILDALPPEQKI RIPMMPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRS >gi|289775432|gb|GG745511.1| GENE 188 200711 - 201895 1863 394 aa, chain - ## HITS:1 COG:ECs4483 KEGG:ns NR:ns ## COG: ECs4483 COG1304 # Protein_GI_number: 15833737 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 377 1 377 396 712 93.0 0 MIISAASDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSL ETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTI KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALR RYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLEDYIGWLANNFDPSISWKDLEWI RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD ITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMT LTGAKTIREISRDSLVQNAEALQTFDALKQNNAA >gi|289775432|gb|GG745511.1| GENE 189 201895 - 202668 774 257 aa, chain - ## HITS:1 COG:STM3693 KEGG:ns NR:ns ## COG: STM3693 COG2186 # Protein_GI_number: 16766978 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 256 1 256 258 419 87.0 1e-117 MIVMPKRLADDVARRVRALIEEQQLEAGMRLPAERQLAAQLGVSRNSLREALAMLVNEGV LLSRRGGGTFVRWQHEPWSEQNIVQPLKTLLADDPDYSFDILEARHAIEASTAWHAAMRA TDADKEKIRLCFEATQSEDPDIASQADVRFHLAIAEASHNVVLLQTMRGFFDLLHSSVKQ SRQRMYLVPPVFARLTEQHQAVMEAIVAGDAEAARQAMMGHLGFVHATIKRFDEDQARQA RITRLPGDHNENSRENS >gi|289775432|gb|GG745511.1| GENE 190 202665 - 204320 2539 551 aa, chain - ## HITS:1 COG:STM3692 KEGG:ns NR:ns ## COG: STM3692 COG1620 # Protein_GI_number: 16766977 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Salmonella typhimurium LT2 # 1 551 1 551 551 905 93.0 0 MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYLAATWTVAIALAVALLFYKM PVDRALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFSFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIVNTAPVAFGAMGIPILVA GQVTGIDSFAIGQMVGRQLPFLTIIVLFWIMAIMDGWRGIKETWPAVMVAGGSFAIAQYL SSNFLGPELPDIISSLVSLVCLTLFLKRWQPVRIFRFGDIGASQVDMTLARTRYTAGQVI RAWSPFLFLTATVTLWSVPPFKALFAPGGAMYDFVINISVPFLDKMVARMPPVVSAATPY AAVYKFDWLSATGTAILFAALLSIVWLRMKPKDALTTFAGTLKDLALPIYSIGMVLAFAF ISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGV SDILLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGLITT LQAYVLTWMIP >gi|289775432|gb|GG745511.1| GENE 191 204605 - 204967 663 120 aa, chain - ## HITS:1 COG:no KEGG:CKO_05058 NR:ns ## KEGG: CKO_05058 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 120 1 120 120 160 93.0 2e-38 MKEVEKNEIKRLSDRLDAIRHQQAELSLVEAADKYAELEKEKATLEAEIERLRSVQSQKL SKEAQKLMSLPFRRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLKEMTGFARSEF >gi|289775432|gb|GG745511.1| GENE 192 205240 - 205464 213 74 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0156 NR:ns ## KEGG: Kvar_0156 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 74 1 74 74 129 98.0 5e-29 MAKIGEGVPRLIDKAVDFMASSQAFMEYLKKSPRLQHIPRDIPQDKEALFLQRLEYYRQL YRPTCDQTEPESER >gi|289775432|gb|GG745511.1| GENE 193 205453 - 206049 655 198 aa, chain - ## HITS:1 COG:STM3687 KEGG:ns NR:ns ## COG: STM3687 COG3722 # Protein_GI_number: 16766972 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 195 3 196 196 309 85.0 2e-84 MHNLARPTSRPLRLLSDMQAMMEETQAFENRVLERLNAGKTVRSFLIATVELLTEAVNIL VLQVFRKDDYAVKYAVEPLLEGSGPLGDLSVRLKLIYGLGVISRAEYEDAELLMALREEL NHDGNEYSFTDDEIIGPFGELHCVAALPPTPQFDDSDAELLAMQKLRYQQMVRSTMVLSL TELISRISLKKAFQKSTL >gi|289775432|gb|GG745511.1| GENE 194 206049 - 207197 1493 382 aa, chain - ## HITS:1 COG:STM3686 KEGG:ns NR:ns ## COG: STM3686 COG0246 # Protein_GI_number: 16766971 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 382 1 382 382 680 92.0 0 MKALHFGAGNIGRGFIGKLLADAGIELTFADVNQTVLDALNARHSYQVHVVGENEQVDTV SGVNAVSSIGDEVVDLIAEVDLVTTAVGPVVLERIAPAIAKGLAKRKAQGSERPLNIIAC ENMVRGTTQLKGHVFNALAEEDKAWVEAHIGFVDSAVDRIVPPSASATHDPLEVTVETFS EWIVDKTQFKGALPTIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL DEKIRAVVQGAMEESGAVLIKRYAFDPQKHAAYIQKILGRFENPYLKDDVERVGRQPLRK LSAGDRLIKPLLGTLEYGLPHRNLVKGIAAAMHFRSEDDPQAQELAALIADKGPQAALAQ ISGLDAASDVVAEAVNDYNAEK >gi|289775432|gb|GG745511.1| GENE 195 207300 - 209207 2510 635 aa, chain - ## HITS:1 COG:ECs4475_1 KEGG:ns NR:ns ## COG: ECs4475_1 COG2213 # Protein_GI_number: 15833729 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 882 95.0 0 MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLL PLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGYCIKKFDNWVDG KIKSGFEMLVNNFSAGIIGMILAILAFLGIGPAVEVLSKILAAGVNFMVAHDMLPLASIF VEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLLAYMFFGRGSAK QSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILNGGLVSPASPGSI LAVLAMTPKGAYFANIAAIIAAMAVSFVVSAVLLKTSKVKEEDDIEAATRRMHDMKAESK GASPLAAGNVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKVQDAGLSNISVTNSAINNL PPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHIENEVKVTD SLKDSFDDGDKNLFQLGADNIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREK LTSTYLGESIAVPHGTIEAKDRVLKTGVVFCQYPEGVRFGEDEDDVARLVIGIAARNNEH IQVITSLTNALDDETVIERLAKTTSVDEVLALLNK >gi|289775432|gb|GG745511.1| GENE 196 209746 - 210114 263 122 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0160 NR:ns ## KEGG: Kvar_0160 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 122 1 122 122 236 100.0 2e-61 MFLNYFALGVLIFVFLVIFYGIIIIHDIPYLIAKKRNHPHSDAIHVAGWVSLFTLHVIWP FLWIWATLYQPERGWGMQHKANTAPDEPEKETDIQQLRQRLSDLEHQVAAIQRPQSISAA EK >gi|289775432|gb|GG745511.1| GENE 197 210118 - 211254 1492 378 aa, chain + ## HITS:1 COG:ECs4473 KEGG:ns NR:ns ## COG: ECs4473 COG1566 # Protein_GI_number: 15833727 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 637 84.0 0 MDLLIILTYVAIAWSIFKIFKIPVNKWTVPTAALGGVFIVSALILLMNYNHPYTFLAQKA VISIPITPQVTGVVNSVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLVTALHSINTL KAQLSEAQANTTRVSAERDRLYKDYQRYLKGSQARVNPFSESDIDNARQNYLAQDALVKA SVAEQAQIQSQLDSMINGEQSQVASLRAQLAEAKYNLDQTTVRAPSDGYITQVLIRPGTY AASLPLRPVMVFIPEQKRLIVAQFRQNSLLRLEKGDDAEAVFNALPGQVFHGKLVSILPV VPGGSYQAQGALQSLTVTPGSDGVLATIELDPNAEIDALPDGIYAQVAVYSDHFTHVSVM RKVLLRMTSWMHYLYLDH >gi|289775432|gb|GG745511.1| GENE 198 211361 - 211969 637 202 aa, chain + ## HITS:1 COG:STM3684 KEGG:ns NR:ns ## COG: STM3684 COG0625 # Protein_GI_number: 16766969 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 201 1 201 202 295 73.0 4e-80 MKLIGSYTSPFVRKISVILLEKRIPFEFVNESPYSESNGVARYNPLGKVPALVTDDGECW FDSPVIAQYLELLGVAPPMIPADPRAALRMRQLEALADGVMEAAQALVREKARPGAQQSE QELLRQREKVARGLDRLEACAADGTLRGDEVNLATISTACAIAYLNFRRVAPGWCATRPQ LVKLVDALFQRASFARTEPPRT >gi|289775432|gb|GG745511.1| GENE 199 212075 - 213463 1461 462 aa, chain + ## HITS:1 COG:STM3683 KEGG:ns NR:ns ## COG: STM3683 COG1921 # Protein_GI_number: 16766968 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 462 1 463 463 688 80.0 0 MTTDIRALYTRLPAIDRLLRDPAFSPLLAQHGHSQVVAQLRQMLDEAREQISQRQTLPDW SHDWLHACEQRLTAGQRSALRPVFNLTGTVLHTNLGRAIQAESAVEAVASAMRAPVTLEY DLDDAGRGHRDRAIADLLCQITGAEDACIVNNNAAAVLLMLAATASGREVVVSRGELVEI GGAFRIPDVMRQAGCQLHEVGTTNRTHAKDYRQAVNDNTALLMKVHTSNYSIEGFTKAVD EAELAAIGRELDIPVVADLGSGSLVDLSQYGLPKEPMPQEMIAAGVSLVSFSGDKLLGGP QAGIIVGKRALIARLQSHPLKRALRADKMTLAALEATLRLYQHPEVLTERLPTLRLLTRP AEEIRRLAERLLPDLAAHYADFAVSVAACQSQIGSGSLPVDRLPSAALTFTPHDGRGSRL EALAARWRALPCPVIGRIDDGRLWLDLRCLEDETRFMEMLLR >gi|289775432|gb|GG745511.1| GENE 200 213460 - 215301 2024 613 aa, chain + ## HITS:1 COG:selB KEGG:ns NR:ns ## COG: selB COG3276 # Protein_GI_number: 16131461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli K12 # 1 612 1 611 614 953 79.0 0 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKARGMTIDLGYAYWPQPDGRVLGFIDVPG HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGKPTLTVALTKTDRVAAA RVEEVRAEVEQTLRELGFDAVAFFPTAAAENIGIAELRSHLLQLAERPHPQQQRFRLALD RAFTVKGAGLVVTGTALSGEVRVGDTLWLTGVNTPMRVRGLHAQNQAVEQAHAGQRIALN IVGDAQKEAVHRGDWLLSSPPPEPAERVIVELQCHTPLSQWQPLHIHHAASHITGRVSLL EGNLAELVLDTPLWLADNDRLVLRDISARMTLAGARVVTLDPPRRGKRKPEYLQWLHALA AVGADDAPALELHLQRDAVRLERFAWARQLSEAGMAALIQRPDYLQAGQRLLSAPLAARW QRKLLDALARYHEQHRDEPGPGRERLRRIALPMEDEALVLLLIEQMRESGLVHSHHGWLH LPEHKAGFTDEQQAVWQKVETLFGDDPWWVRDLAREVHVEESLMRAVLRQAAQQGMITAI VKDRYYRNDRIVQFAQRVRELDQLRGSTCAADFRDTLNVGRKLAIQILEYFDRIGFTRRR GNDHILRDKALFL >gi|289775432|gb|GG745511.1| GENE 201 215546 - 216031 254 161 aa, chain + ## HITS:1 COG:STM2843 KEGG:ns NR:ns ## COG: STM2843 COG1142 # Protein_GI_number: 16766149 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Salmonella typhimurium LT2 # 1 160 1 173 181 164 58.0 5e-41 MNQFLIANAQRCIGCRTCEVACAVAHQQAQDVAALSTNHFAPRIRVVKSGDISTATACRQ CEDAPCASVCPQGAIQRDNDVWWVDQRRCIGCKSCMVACPYGAMTVTVVNEQAQALKCDL CHHRAEGPACVAACPTQALRVMVPAELEALCAQKRQRLALA >gi|289775432|gb|GG745511.1| GENE 202 216074 - 217330 1549 418 aa, chain - ## HITS:1 COG:ECs4455 KEGG:ns NR:ns ## COG: ECs4455 COG3977 # Protein_GI_number: 15833709 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Escherichia coli O157:H7 # 1 415 1 415 417 802 90.0 0 MTFSLFGDKFTRHSGITRLMEDLNDGLRTPGAIMLGGGNPAQIPEMNDYFQQLLSDMLDN GKALDALCNYDGPQGKSELLSLLANMLRDELGWEIEPQNIALTNGSQSAFFYLFNLFAGR RADGTTRKVLFPLTPEYIGYADAGLEEDLFVATRPNIELLPEGQFKYHVDFEHLQVTEET GMICVSRPTNPTGNVITDEELIKLDALANQHGVPLVIDNAYGVPFPGIIFSDARPLWNPN IVLCMSLSKLGLPGSRCGIIIANEKIITAISNMNGIISLAPGGIGPAMMCEMIKRQDLLR LSETVIKPFYYQRVQETIAIIRRYLPEERCLIHKPEGAIFLWLWFKDLPVSTELLYQRLK KRGVLMVPGDYFFPGLDKPWPHTHQCMRMNYVPDPQKIEAGVKILAEEIEFAWREQEA >gi|289775432|gb|GG745511.1| GENE 203 217499 - 219580 2531 693 aa, chain - ## HITS:1 COG:ECs4454 KEGG:ns NR:ns ## COG: ECs4454 COG0366 # Protein_GI_number: 15833708 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 17 692 1 676 676 1120 80.0 0 MRQQGTLDKNRSQDPAMKLAALATLFVPGMAFAAWTTTDFPAFTEEGTGRFISQKVVEKG TRPLQLNFDQQCWQPSGGIKLNQMLSMEPCRGTPPQWRIFRQGLYTLEVDTRSGTPTMMI SLEEKEASAAAPQIRQCPKWDGKPLTIDVSKTFAEGSKVRDFYSGNVATVSGGKITLQPA FGSNGLLLLERAETAAPAPFDWHNATVYFVLTDRFVNGNPANDNSYGRHKDGMQEIGTFH GGDLQGLTSKLDYLQQMGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTQDWSKLD ANMGTEADLRRLVDEAHKRGIRILFDVVMNHTGYATLADMQEFQFGALYLQGDELKKTLG ERWTDWKPGAGQTWHSFNDYINFSDKAGWEKWWGKKWIRTDIGDYDNPGYDDLTMSLAFL PDLKTESKEASGLPNFYSHKPDTAAKAIPGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKH VEMDAWQQLKTQATAALAEWKKANPDKALDAAPFWMTGEAWGHGVMQSDYYRHGFDAMIN FDYQDQAAKAATCMANIDLTWQQMADKLQSFNVLSYLSSHDTRLFREGGTTAAELLLLAP GAVQIFYGDESSRPFGPTGSDPLQGTRSQMNWQDVNGKAARSVTHWQKIGQFRARHPAIG MGKQTTLSMPRGYGFVRESGEDKVMVIWAGQQQ >gi|289775432|gb|GG745511.1| GENE 204 220102 - 220665 529 187 aa, chain + ## HITS:1 COG:STM3663 KEGG:ns NR:ns ## COG: STM3663 COG2992 # Protein_GI_number: 16766948 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Salmonella typhimurium LT2 # 1 187 85 274 274 299 82.0 2e-81 MPYITKQNQAITADRNWLVSKQYDARWSPTEKARLKDIAARYKVKWSGNTRHVPWNALLE RVDIIPNSMVATMAAAESGWGTSKLARENNNLFGMKCGAGRCRGAMKGYSQFESVEQSVQ AYVTNLNTHPAYSSFRKSRLQLRKADQEVTASTMIHKLKGYSTKGSSYNNYLFAMYQDNQ RLIAAHL >gi|289775432|gb|GG745511.1| GENE 205 220704 - 221882 1301 392 aa, chain - ## HITS:1 COG:xylR_1 KEGG:ns NR:ns ## COG: xylR_1 COG1609 # Protein_GI_number: 16131440 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 265 1 265 265 483 89.0 1e-136 MFEKRHRITLLFNANKAYDRQVVEGVGEYLQASQLEWDIFIEEDFRARIENIKEWLGDGV IADYDDPEIEKLLADVHVPIVGVGGSYHQPEQYPPVHYIATDNAALVESAFLHLKEKGVH RFAFYGLPTSSGKRWAVEREYAFCQLVAKEKYRGVVYQGLETAPENWQHAQNRLADWLQT LPPQTGIIAVTDARARHVLQACELLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR QMGYQAAKLLHRLLNNEVLPLQRQLIPPMRVVERRSTDYRSLNDPSVIQAMHYIRNNACK GIKVEQVLDAVGISRSNLEKRFKEEVGETIHTVIHSEKLEKARSLLVSTSLSINEISQMC GYPSLQYFYSVFKKEYDVTPKEYRDRHSEVML >gi|289775432|gb|GG745511.1| GENE 206 222117 - 223298 1712 393 aa, chain - ## HITS:1 COG:YPO4035 KEGG:ns NR:ns ## COG: YPO4035 COG4214 # Protein_GI_number: 16124155 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Yersinia pestis # 22 392 23 393 394 523 86.0 1e-148 MSKNTSSEIKLTPTAPAALPALKGLNLQVFVMIAAIVVIMLFFTWVTDGAYLSARNISNL LRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGAAAIFDVWLGWPLPLTILVTLVMG LLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSPAMAQIGQSYLPDG IGFGIGVVGMAAFIVWQWRGRMRRQALGLATSSSTAAVGRQAITAVIVLGAIWLLNDYRG VPTPVLILAALLLAGLFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMV AIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGIGSVAGAVMGAFIMSALDNG MSMMDVATFWQYIVKGAILLLAVWMDSATKRRA >gi|289775432|gb|GG745511.1| GENE 207 223276 - 224817 204 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 256 483 9 240 329 83 27 2e-14 MAWLLEMKNITKTFGAVKAVDNVSLRLNAGEVVSLCGENGSGKSTLMKVLCGIYPHGSYE GEIIFAGETLQANHIRDTERKGIAIIHQELVLVKHLTVLENIFLGAEISRHGLLDYETMT LRCQKLLAQVNLPISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAT LLTIIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDASGMSEDDIITMMVG RELTALYPSEPHAHGEEILRVEHLTAWHPVNRHIKRVNDVSFSLRRGEILGIAGLVGAGR TEAVQCLFGVWPGRWQGEIFIDGQPVSISNCQQAIAHGIAMVPEDRKKDGIVPVMAVGKN ITLAALNQFTGAMSSLDDAAEQHCIQQSIQRLKIKTSSPELAIGRLSGGNQQKAILARCL LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE GRLKANLVNQHLTQEQVMEAALRSERHVEEHVV >gi|289775432|gb|GG745511.1| GENE 208 224882 - 225877 1153 331 aa, chain - ## HITS:1 COG:xylF KEGG:ns NR:ns ## COG: xylF COG4213 # Protein_GI_number: 16131437 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Escherichia coli K12 # 1 331 1 330 330 527 89.0 1e-149 MKIKNLCLTLCASSLLLASMAGMAKEVKIGMAIDDLRLERWQKDRDIFVNKAESLGAKVF VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVIKEAKQEGIKVLAYDRIINNA DIDFYISFDNEKVGEMQAQSLVDKVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDEG KIKIVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALTAQGLAGKV AISGQDADLAGVKRIISGTQTMTVYKPITTLATNAAEIAVELGNDKQPKADTTLNNGLKD VPSRLLTPIEVNKENIDATVIKDGFHKKSEL >gi|289775432|gb|GG745511.1| GENE 209 226383 - 227705 1983 440 aa, chain + ## HITS:1 COG:STM3661 KEGG:ns NR:ns ## COG: STM3661 COG2115 # Protein_GI_number: 16766946 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Salmonella typhimurium LT2 # 1 440 1 440 440 850 91.0 0 MQTYFDQLDRVRYEGPKSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMF GVGSFDRPWQQPGDALEMAKRKADVAFEFFHKLNVPYYCFHDVDVSPEGASLQEYSNNFA RMVEVLAEKQQQSGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMNATHQL GGENYVLWGGREGYETLLNTDLRQEREQIGRFMQLVVEHKHKIGFKGTLLIEPKPQEPTK HQYDYDASTVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRG DPQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAM DTMALSLKVAARMIEDGELDKRVARRYAGWNGELGQQILNGQMTLSDIAQYATQHQLAPQ HRSGQQEQLENLVNHYLFDK >gi|289775432|gb|GG745511.1| GENE 210 227798 - 229252 1774 484 aa, chain + ## HITS:1 COG:ECs4447 KEGG:ns NR:ns ## COG: ECs4447 COG1070 # Protein_GI_number: 15833701 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 781 85.0 0 MYIGIDLGTSGVKAILLNEQGEVVASHTEKLTVSRPHPLWSEQDPEQWWLATDTAMKALG AQHSLRDVKALGIAGQMHGATLLDKSLQVLRPAILWNDGRCAEECQLLEEKVSASRQITG NLMMPGFTAPKLLWVQRHEAAVFNQVDKVLLPKDYLRLRMTGELASDMSDAAGTMWLDVA RRDWSDEMLAACDLSRDAMPALFEGSDVTGQLRPEVAQAWNMPQALVVGGGGDNAAGAVG VGMADAGQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPGRWHLMSVMLSAASCLDW AAKLTGLASVPALIAAAQTADESAGPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPAE LARAVLEGVGYALADGMDVVHACGIKPQSITLIGGGARSAYWRQMLADISGQQLDYRTGG DVGPALGAARLAQLAVHDEADRAGLLKPLPLEQAHRPDDRRVAHYAPQRETFRQIYQQLK PLMS >gi|289775432|gb|GG745511.1| GENE 211 229454 - 229792 486 112 aa, chain + ## HITS:1 COG:yiaB KEGG:ns NR:ns ## COG: yiaB COG4682 # Protein_GI_number: 16131434 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 4 94 19 109 117 92 48.0 2e-19 MAAGSLVYLLGIWRTCPLFSGKGYFLGVLVMGMFAVLAHQRASQWQEQDDGFIALCRLVL LLSVGLLLVGAWYVPADWHEKAVYIAAWFVCLYGASATPERTRVARAMQKTE >gi|289775432|gb|GG745511.1| GENE 212 229827 - 230270 664 147 aa, chain + ## HITS:1 COG:ECs4445 KEGG:ns NR:ns ## COG: ECs4445 COG4682 # Protein_GI_number: 15833699 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 128 2 129 146 213 82.0 1e-55 MENKHATYSPAFHLISWIALIGGIVTYLVGLWNADMQLNEKGYYFAVLVLGLFAAASYQK TVRDKYEAIPTTALYYTTCLVVFVIAVGLLVIGLWNATLLLSEKGFYGLAYFLSLFGAVA VQKNVRDAWDPTRLREPLSVTEEGPES >gi|289775432|gb|GG745511.1| GENE 213 230297 - 231292 1078 331 aa, chain - ## HITS:1 COG:STM3658 KEGG:ns NR:ns ## COG: STM3658 COG3274 # Protein_GI_number: 16766943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 481 74.0 1e-136 MQEKIHWITNLRGIACMMVVMIHSTSWYITHPHAITLMEWDIANLLNSASRVSVPLFFMI SGYLFFGERSAQPRHFWRIGLCIAFYSALSLLYIALFTHINVELSLKNLLQKPVFYHLWF FFAIAAIYLLSPLIQVKSVSGKMLLALMAILGILANPNMVSVKAAGIEWLPVNLYINGDT FYYVLYGVLGRAIGTLDTNKKWLTPLCAALFIAAVWVISRGTLHELRWRGDFGDTWYLYC GPAVFVCAVALLTLAKNWLNARPLPGIACIARHSLGIYGFHALIVHALRASHLELSRWPL LDIVWIFSAALLGSLLLSGLVQRIDSRRLVS >gi|289775432|gb|GG745511.1| GENE 214 231472 - 231771 319 99 aa, chain + ## HITS:1 COG:no KEGG:KPK_0181 NR:ns ## KEGG: KPK_0181 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 8 99 1 92 92 179 100.0 2e-44 MKGVVSVMLVLLLAGCSETISPPAQKAQRARITPQTTLNMAQLCKDQAAIRYNTQTQLVD VNHFEQFQASYELSGRTGKNERFICSFDPDGQFMHLSMR >gi|289775432|gb|GG745511.1| GENE 215 231899 - 232810 1402 303 aa, chain + ## HITS:1 COG:STM3656 KEGG:ns NR:ns ## COG: STM3656 COG0752 # Protein_GI_number: 16766941 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 303 1 303 303 629 99.0 1e-180 MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMATAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFSCFEQYEKEAQQLLALETPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCN KNK >gi|289775432|gb|GG745511.1| GENE 216 232820 - 234889 2901 689 aa, chain + ## HITS:1 COG:STM3655 KEGG:ns NR:ns ## COG: STM3655 COG0751 # Protein_GI_number: 16766940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 689 1 689 689 1190 88.0 0 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRA HVKGESTEALLPNMIASSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGI PSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAEEAARKIGGQ ADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDNAGKLLPN FIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLETVLFQQQLGT LRDKTDRIQALAGWIAGQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GEAEDVAVALNEQYQPRFAGDALPSNPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKNLPLDLMTLTAEAIRLYGDKLTNPNTLDDVETFMLNRFRAWYQDMG FSIDTILSVLELRPTMPVDFDARVKAVTYFRSQPDAASLAAANKRVSNILSKRVDVLNDS VHPALLTERAEQELAFKLAVVRDRIKPLCQNLQYQDALIELAALREPVDEFFENVMVNAE DKDVRINRLTLLSKLRELFLQVADISLLQ >gi|289775432|gb|GG745511.1| GENE 217 235156 - 235368 197 70 aa, chain + ## HITS:1 COG:no KEGG:KPN_03921 NR:ns ## KEGG: KPN_03921 # Name: not_defined # Def: small toxic polypeptide # Organism: K.pneumoniae # Pathway: not_defined # 1 70 1 70 70 126 98.0 2e-28 MHEHHKSSLLLVENQHWRRGMPQKYLLFGLVVICFTILLLTWMVRDSLCELQLRQGNIEL VAFLACDIKQ >gi|289775432|gb|GG745511.1| GENE 218 235670 - 237289 1714 539 aa, chain + ## HITS:1 COG:PA1425 KEGG:ns NR:ns ## COG: PA1425 COG0488 # Protein_GI_number: 15596622 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Pseudomonas aeruginosa # 10 536 7 535 538 335 42.0 1e-91 MAHCAHIPAFVLHQVTCQFATGDTLFGPLNLSLESSLCGLVGRNGVGKTRLLRLLAGLDS PADGYIERGASIAWVAQQPNVTPEMTLAALLGYAPIFDALSRLEQGQVLAADFDLLDGHW DLPDRLSLAFREADLPPFSADRPVFSLSGGERMKALLCGAFVSGADYLLLDEPTNHLDRQ GREWLYHQLESWQGGALIASHDRELLTRMPRIIELTPTALHSYGGNYDEYQRQRMAEQQA ARAALEHAVTERRRTRARMQKEHDAAQRRSAQTLRTVDTLNIASFERVKYKGAAKERPGT LRRQHREQNSSLNAAVQQARERVEDDNPVMFTLPGSEVAAGKQVLVVEALQLAHSPAAPL DWRMDGPMRIALKGPNGCGKTTLLKTLLGLEQAVSGDVRLSVSAAYLDQHLTQLDLSLSV MAHLSLDDTPLDEGLLRTRLAQLQLGADKVTLPLATLSGGERLKAALACVLWRRDPAQLL LLDEPTNHLDLASTQAIESALAAFPGAMLVVSHDEAFLHGLKLTHSLAWRETGWHFSLL >gi|289775432|gb|GG745511.1| GENE 219 237388 - 237600 305 70 aa, chain - ## HITS:1 COG:ECs4441 KEGG:ns NR:ns ## COG: ECs4441 COG1278 # Protein_GI_number: 15833695 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 122 100.0 1e-28 MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK GPAAGNVTSL >gi|289775432|gb|GG745511.1| GENE 220 237853 - 238143 269 96 aa, chain - ## HITS:1 COG:ECs4440 KEGG:ns NR:ns ## COG: ECs4440 COG2944 # Protein_GI_number: 15833694 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 133 73.0 7e-32 MEYKDPVFELLSSLEHIVFKDDNQKLTSNRKSTVFSEFEQLRKGTGLKIDDFANVMGVSV AMVREWESRRVRPSPTELKLMRLIQANPQLSRQLLD >gi|289775432|gb|GG745511.1| GENE 221 238389 - 239744 1907 451 aa, chain - ## HITS:1 COG:PA0235 KEGG:ns NR:ns ## COG: PA0235 COG0477 # Protein_GI_number: 15595432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 6 413 12 421 448 379 55.0 1e-104 MTKTTIDIQAFINEHPFTRYQWMILALCFITVAMDGFDTAIIGFIASDLVQEWGVEKSAL GPVMSAALVGLAVGALTAGPLADRIGRKKVLIMSIVVFGGFSLLTAFATSLNQLTLLRFL TGLGLGAAMPNAATLMSEYAPERRRALLVNLMFVGFPMGSSLGGFLSAWMIPHYGWQSVL VLGGVMPLLLAVALIFLLPESARYLVVKQQPAQRIAAILKRIAPLPEAVEFELREAGQVK EKSAIGVIFSPRYAVGTVMLCLTYFMGLLIFYLLTSWLPLLIRETGASMSQASIITALFP LGGGIGVLILGALMDKINPNKVVAVGWLLTGVCVCLVGFSTSSLVLMGVMVFIAGSIMNG AQSSMPALAAGFYPTQGRATGVAWMLGIGRFGGILGAFSGAFLMQAQLSFETIFTLLAIP AFLSALALLIKYRVSKSAPATKDDARGLQKA >gi|289775432|gb|GG745511.1| GENE 222 240186 - 240896 950 236 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0187 NR:ns ## KEGG: Kvar_0187 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 236 1 236 236 400 100.0 1e-110 MATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQK KQFGPFVSDYAVIYGYSQQVSQAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGV LSQQLQNAKMQADAAHSALKQADDLKPVFDQVYAKVVTAPADALQPLIPAAQIFTQQLVQ VGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR >gi|289775432|gb|GG745511.1| GENE 223 241005 - 241976 1185 323 aa, chain - ## HITS:1 COG:ECs4438 KEGG:ns NR:ns ## COG: ECs4438 COG1052 # Protein_GI_number: 15833692 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 322 5 326 328 564 86.0 1e-161 MKPSVILYKTLPDDLLQRLEEHFSVTQVKNLRPETVSQHAEAFAQAEGLLGSSEKVDAAL LEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVE VAERVKAGEWTKSIGPDWFGCDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQH PQAEERFNARYCDLDTLLQEADFVCLILPLSEETHHLFGQAQFAKMKSSAIFINAGRGPV VDEQALIAALQAGEIHAAGLDVFEHEPLAKDSPLLTLPNVVALPHIGSATHETRYNMAAC AVDNLIDALNGNVEKNCVNPQVK >gi|289775432|gb|GG745511.1| GENE 224 242001 - 243281 1678 426 aa, chain - ## HITS:1 COG:PA2262 KEGG:ns NR:ns ## COG: PA2262 COG0477 # Protein_GI_number: 15597458 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 7 420 7 419 435 558 70.0 1e-158 MNSSTNATKRWWYIMPIVFITYSLAYLDRANFSFASAAGITEDLGITKGISSLLGALFFL GYFFFQIPGAIYAERRSVRKLIFICLILWGGCASLTGVVHNIPALAAIRFILGVVEAAVM PAMLIYISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYLIQAFGWREMFIIEGVPAVI WAFCWWVLVKDKPSQVNWLAESEKAALQEQLDREQQGIKAVRNYGEAFRSRNVILLCAQY FAWSIGVYGFVLWLPSIIRSGGENMGMVEVGWLSSVPYLAATIAMIVVSWASDKMQNRKL FVWPLLLIGGLAFIGSWAVGANHFWVSYTLLVVAGAAMYAPYGPFFAIIPEMLPRNVAGG AMALINSMGALGSFCGSWFVGYLNGATGSPAASYIFMGVALFASVLLTLIVKPANNQNIP LGAHHA >gi|289775432|gb|GG745511.1| GENE 225 243386 - 244321 1236 311 aa, chain - ## HITS:1 COG:PA2261 KEGG:ns NR:ns ## COG: PA2261 COG0524 # Protein_GI_number: 15597457 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 1 309 1 307 316 320 56.0 2e-87 MENLDVITIGEAMAMFVATETGDLAEVEHFMKRVAGAELNVATGLARLGLKVGWVSRVGN DSFGRFVLQSLAKEGIDSHAVAIDNRFATGFQMKSKVENGTDPIVEYFRKGSAASHLSPD DFRADYFTSARHLHLSGVAAALSESSYALLEHAAKVMKAEGKTLSFDPNLRPVLWKSEAE MVEKLNRLAFQADWVLPGLKEGVILTGQQTPEGIADFYLSRGVKAVVIKTGCDGAWFKSA SGEQGTVDAIKVENVVDTVGAGDGFAVGVISALLEGKTLLQAVNRGNKIGSLAIQVQGDS EGLPTRDALGE >gi|289775432|gb|GG745511.1| GENE 226 244325 - 245074 812 249 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0191 NR:ns ## KEGG: Kvar_0191 # Name: not_defined # Def: xylose isomerase # Organism: K.variicola # Pathway: not_defined # 1 249 1 249 249 487 100.0 1e-136 MARKIIVVTAAYGNDHVKSLGGQAAVLPFIADAGADGVEIRRELCSAEELNALPSLAATI ERHGLLACYSAPQALFADNGELNPELPALLAEAQTLNALWLKLSLGHFLHNQQLDELREI LRDSGMALVVENDQTDCGQLAPMQRFKAACRVHQLPVTLTFDMGNWLWVGDSPEEAARHL APAVSYIHVKAAEPHHEKFRAVPPDQAADRWLALLDNLPADAPRGIEFPLTGHDLTAVTR RYVNLLRED >gi|289775432|gb|GG745511.1| GENE 227 245186 - 246202 1324 338 aa, chain - ## HITS:1 COG:PA2259 KEGG:ns NR:ns ## COG: PA2259 COG1609 # Protein_GI_number: 15597455 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 5 336 10 336 340 283 46.0 3e-76 MAKAARATISDVAKAAKTGKTSISRYLNGEKHLLSDDLLSRIEKAIAELDYRPSLMARGL KHGRTRLIGLIIADITNPYSVNVMSGIEAACREKGFTLLVCNTNNELDQELHYLDLLRSY QVEGIVVNAVGMREDGLNRLQQSALPMVLIDRKIPDFACDVVGLDNAQAATTATEHLVEK GFEAILFLSEPLGSVNTRRERLSAFRATLTRHHGVVAENAEVQLNDGAMMDNVLRQFHAR HRGMRKAVISANGALTLQVARALKRVGLIWGSDIGLLGFDELEWAELAGVGITTLKQPTW QIGYAAVEQVIRRIAGTNDPIRERVFSGELIVRGSTSR >gi|289775432|gb|GG745511.1| GENE 228 246306 - 246968 975 220 aa, chain - ## HITS:1 COG:STM3645 KEGG:ns NR:ns ## COG: STM3645 COG2885 # Protein_GI_number: 16766931 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 300 91.0 2e-81 MKKRVLMIAALVSGTLAISGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGALSSSKHDRG KGALIGAAAGAALGGGIGYYMDVQEAKLRDKMQGTGVSVTRNGDNIVLNMPNNVTFDSNS ANLKPAGANTLTGVAMVLKEYEKTAVNVVGYTDSTGSKDLNMRLSQQRADSVASALITQG VAANRIRTTGMGPANPIASNSTAEGKAQNRRVEITLSPLQ >gi|289775432|gb|GG745511.1| GENE 229 247136 - 249466 2946 776 aa, chain + ## HITS:1 COG:STM3644 KEGG:ns NR:ns ## COG: STM3644 COG0243 # Protein_GI_number: 16766930 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 776 1 777 777 1353 83.0 0 MPTSSATKTILTAAHWGPMLVETDGENVLSSRGALATPFANSLQTAVRDQVHSKTRVRYP MVRKGFLASPDKPQGVRGQDEFVRVSWDQALDLIDAQHRRIRESYGPQSIFAGSYGWRSN GVLHKAATLLQRYMSLAGGYTGHLGDYSTGAAQAIMPYVVGGNEVYQQQTSWPLVLEHSE VVVLWSANPLNTLKIAWNASDEQGIPWFDRLRQSGKRLICIDPMRSETVDFFGDSMEWIA PHMGTDVALMLGIAHTLVENSWQDDAFLTRCTSGYDIFARYLTGESDGVAKTADWAAAIC GVKADKIRELAKIFHENTTMLMSGWGMQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGLS YHFANGGNPTRRAAVLGSMQGSVAGGVDAVEKIPVARIVEALENPGAEYQHNGMARRFPD IRFIWWAGGANFTHHQDTNRLIQAWQKPELIVISECFWTAAARHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVAPRDEARDDFAVFADLSERWEVGGRERFTEGKSDLQWLETFY QIAAQRGAHQQVTLPPFAEFWQANQLIEMPEEPENARFARFAAFRADPQANPLKTASGKI EIHSPTIAAFGYADCPPHPMWLEPDEWHGNAEAGQLQLLSAHPAHRLHSQLNHTTLRERY AVAGREPVTIHPQDARARGIADGDLVRVWNARGQVLAGAVVTEGIRPGVICLHEGAWPDL DPRVGICKNGAVNVLTKDIPTSRLGNGCAGNTALAWLEKYTGPTLPLTAFDPPANA >gi|289775432|gb|GG745511.1| GENE 230 249435 - 249875 556 146 aa, chain - ## HITS:1 COG:STM3643 KEGG:ns NR:ns ## COG: STM3643 COG0454 # Protein_GI_number: 16766929 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 144 1 144 146 206 72.0 1e-53 MIRKWDTKDTAPLLALWLDSTIHAHPFISESYWRDSVAVVRDVYLPAASTWVWERDGELK GFVSVLDSRFVGALFVAPDAIRQGIGRALLDEVKQHYAWLSLEVYQKNESAVSFYHAQGF RIEDCAWQDDTQHPTWIMRWPADQML >gi|289775432|gb|GG745511.1| GENE 231 249853 - 250434 366 193 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 181 1 181 185 145 38 3e-33 MQRCGWVSQDPLYIEYHDTEWGVAQKEGRQLFEMICLEGQQAGLSWITVLKKRQNYRQAF HQFDPVRVAAMGEDDVEQLLQNAGIIRHRGKIQAIIGNARAYLAMEENGESFTDFVWSFV NNEPQVTCAATLAEIPTTTPASDALSKALKKRGFKFVGSTICYSFMQACGLVNDHITGCF CHPGGQDDPQVGH >gi|289775432|gb|GG745511.1| GENE 232 250578 - 251222 394 214 aa, chain + ## HITS:1 COG:ECs4433 KEGG:ns NR:ns ## COG: ECs4433 COG5571 # Protein_GI_number: 15833687 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Escherichia coli O157:H7 # 1 214 3 234 234 149 42.0 3e-36 MIIKKCNGLRGFLFPASVSVWMTCVSGANAWQQEYIAIDTKSNTPERYTWDSDHQPRYED ILAERMKSSETPGGLALNQALAPPDSSRGQSVGWNYLLANGMTSGPVASLRSDVTAPVTR SAGETGYVNTLGWRMDYQSLWGVHPWAQVSYNQSLTSDAWSPTTRAREGGWSDVTLGADM RLGSHVAAWATLSQADNVPSGENTLYLMGVSANF >gi|289775432|gb|GG745511.1| GENE 233 251462 - 252667 1902 401 aa, chain + ## HITS:1 COG:ECs4432 KEGG:ns NR:ns ## COG: ECs4432 COG0477 # Protein_GI_number: 15833686 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 400 1 399 400 602 88.0 1e-172 MNAANRQSTRWLTLIGTIITQFALGSVYTWSLFNSSLSDKLGEPVSQVAFSFGLLSLGLA LSSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNSLMMLWLSAGVLVGLADGAGYLL TLSNCVKWFPERKGLISAFSIGSYGLGSLGFKFIDSHLLATVGLEKTFVIWGAIVLVMIV FGATLMKDAPNHTATTAANGVVENDFTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKD IAQGMVHLDVATAANAVTVISIANLSGRLVLGILSDKISRIRVITLGQIVSLVGMAALLF APLNAMTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSLI ASLFGGFYVTFCVIFALLILSLALSTTIRQPRGSVYSEAHA >gi|289775432|gb|GG745511.1| GENE 234 252910 - 254583 2171 557 aa, chain + ## HITS:1 COG:STM3635 KEGG:ns NR:ns ## COG: STM3635 COG2194 # Protein_GI_number: 16766921 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 1 553 1 552 563 962 82.0 0 MKYIRTMTQQKLSFWLALYIGWFMNIAVFFRRFDGYAQEFTFWKGLSGVVELVATVFVTF FLLRLLSLFGRRIWRILATLIVLFSAAASYYMTFLNVVIGYGIIASVMTTDIDLSKEVIG WHLILWLVVVSAPPLLFIWSNRCRHTLLRQLRTPGQRVKNVLIVVLAGLIVWGPIRLLEL RQHDVERHSEVDMPSYGGVIANSYLPSNWLSALGLYAWAQVDESSDNKSLINPAKKFTYV APEGLDDTYVVFIIGETTRWDHMGILGYSRNTTPELEKEKNLVAFRGYSCDTATKLSLRC MFVRQGGAEDNPQRTLKEQNVFAVLHQLGFSGNLYAMQSEMWFYSNTMANNIAYREQIGA EPRNRGKSVDDMLLVDEMKRGMAQGNASGKHLIILHTKGSHFNYTQRYPRSFAQWKPECV GVDNKCSKAELINSYDNSVTYVDHFIVSVLDQLRDKKAIVFYAADHGESINEREHLHGTP RKMAPPEQFRVPMMVWMSDKYLENPDHAAAFAHLQQQAAMKVPRRHVELYDTIMGCLGYT SPDGGINENNNWCRWKK >gi|289775432|gb|GG745511.1| GENE 235 254780 - 256174 1387 464 aa, chain + ## HITS:1 COG:all2748 KEGG:ns NR:ns ## COG: all2748 COG0666 # Protein_GI_number: 17230240 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Nostoc sp. PCC 7120 # 4 382 17 403 426 104 30.0 3e-22 MKVIKGLALLCLLMLAGCQSEEETSQFLLACKYDAPATIEAMLNNGIDVDGQDKTGLSGL MVAAAENRRDVVALLLKRQAKPNLQTRQGVTALMLAAARGSDAAIIGDLLQAGASVNQTS VEKSTALMSAIADGGDVRNDYQHILAMKKPDAPVEKESALDKIVGATAAKSLATGNRALM TEDMALQLAPGAFKKNVDEIVALLIRHGADVKAVNASGESAFFLAVDHARSAETITTLAN AGADTSLADKSGTTPLMLAAAGDDPNLVLALSASGVEVDKPNREGLTALQVAAGQGSPAV IAALVQRGAKVDQLSANDLSPLMLAVKMNNKANVEALLEAGASVNLSNKAGYTAIGYSRA GEVRQLLLAQHAELKGQAAHMAQSELQFCANAFADKLAYSDIARAVNNDTRPDIMRHQQS CPELGELTMLLGEFKFNPAGSTYLGEPVTCKVSEYRKAFEVTCR >gi|289775432|gb|GG745511.1| GENE 236 257207 - 258814 2065 535 aa, chain + ## HITS:1 COG:STM3630 KEGG:ns NR:ns ## COG: STM3630 COG0747 # Protein_GI_number: 16766917 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 535 1 535 535 1034 94.0 0 MSISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPI YNRLVEFKTGTTEVIPGLAEKWEVSPDGKTYTFHLRQGVKWQDNKDFKPTRDLNADDIVF SFDRQKNTNNPYHKVSGGSYEYFEGMGLPDLISEVKKVDDKTVQFVLTRPEAPFLADLAM DFASILSKEYADNMLKAGTPEKVDLNPIGTGPFQLLQYQKDSRILYKAFPGYWGTKPKID RLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKEDKNITLLEQPGLNVGYLSFNTE KKPLDDVKVRQALTYAVNKEAIIKAVYQGAGQAAKNLIPPTMWGYNDDVKDYTYDPEKAK QLLKEAGLEKGFTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKR AKAGEHQTVMMGWTGDNGDPDNFFATLFSCAAAKDGSNYSRWCYKPFEDLIQPARATDDH NKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFDNVSVE >gi|289775432|gb|GG745511.1| GENE 237 258949 - 259968 350 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 66 333 43 310 320 139 29 2e-31 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEMGLDK PLWQQYAHYIWGVLHGDLGISLKSRIPVWQEFVPRFKATLELGVCAMIFAVAVGIPVGVL AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLDDTLP LTGFMLIDTAIWGEQGDFIDALMHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA RAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK >gi|289775432|gb|GG745511.1| GENE 238 259978 - 260880 1624 300 aa, chain + ## HITS:1 COG:STM3628 KEGG:ns NR:ns ## COG: STM3628 COG1173 # Protein_GI_number: 16766915 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 300 1 300 300 459 90.0 1e-129 MSQVSENKAIAAPVPMTPLQEFWHYFKRNKGAVVGLVYVAVMIIIAVFANFLAPYNPADQ FRDSLLAPPFWQDGGSLAHLLGTDDVGRDILSRLMYGARLSLLVGCLVVVLSLILGVVLG LVAGYFGGVVDSIIMRVVDIMLALPSLLLALVLVAIFGPSIVNASLALTFVALPHYVRLT RAAVLVEVNRDYVTASRVAGAGAMRQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFL GMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGVAILLTVLAFNLMGDGLRDALDPKLKQ >gi|289775432|gb|GG745511.1| GENE 239 260891 - 261874 592 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 315 11 324 329 232 40 2e-59 MALLNVDKLSVHFGDENAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP GRVMADKLEFNGRDLQRISEKERRQLVGAEVAMIFQDPMTSLNPCYTVGYQIMEAIKVHQ GGNKQTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQQENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAKD IFRAPRHPYTQALLRALPEFAQDKARLASLPGVVPGKYDRPVGCLLNPRCPYATDKCRSE EPALADLTGGRQSKCHYPLDDAGRPGL >gi|289775432|gb|GG745511.1| GENE 240 261871 - 262884 799 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 328 2 329 329 312 47 2e-83 MSTQKAATQQPLLQAIDLKKHYPVKKGIFAPERLVKALDGVSFTLERGKTLAVVGESGCG KSTLGRLLTMIEIPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQ ILEEPLLINSSLSKEQRREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDP DVVIADEPVSALDVSVRAQVLNLMMDLQQDLGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCR RRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQKPHA >gi|289775432|gb|GG745511.1| GENE 241 263926 - 264729 822 267 aa, chain + ## HITS:1 COG:STM3620 KEGG:ns NR:ns ## COG: STM3620 COG1192 # Protein_GI_number: 16766906 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 242 1 232 250 82 28.0 8e-16 MPLICVCSPKGGVGKTTLAANLAYSLARTGSKVLALDFDVQNALRLHFGVPLSDERGYVA KALELHDWSQCVLSAGSNIFVLPYGEVSEAQRQAFDEQLTHNDHFLQRGLSALLNYPGLI TIADMPPGPSPALKALTGLADLHLIPLLADTASMSTLAHVEKQRLTGGALNHKHGHYFVI NQSDSRRQVSRDVTSLMEEKLGERLLGVIHRDESVVEANASQKSILDFNASSAAAFDIEI MAKKISSLLGIHIGDGTVHSQPRMSGL >gi|289775432|gb|GG745511.1| GENE 242 264749 - 266860 2481 703 aa, chain + ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 16 674 178 836 888 616 46.0 1e-176 MKKSLFWLLALVLSPVAVLVVITPMDSQKQYIFGLLSIGILFLMGFSKRRSVSVIMVVTS LLMSTRYMYFRLTQTLHFNSSIEAILGMGLFLAEVYIWVMLLLNYLQTVWPLKRGIVPLP DDMSKWPTVDIYIPSYNEPLEVVRDTVLAAQCIDYPKDKMKIYLLDDGKRSEFAVFAADV GVGYITRNDNKHAKAGNLNHALTLTHGELICVFDCDHVATRVFLQATVGGFLKDPMLALV QTPHYFYSPDPFERNLSVGRNIPNEGMLFYGPIQQGNDNWNATFFCGSCAVIRREALAQI GGFAVETVTEDAHTALKFQRLGWKSAFLDIPLAAGLATERLVVHVIQRTRWARGMTQIFR VDNPLFGRGLTFQQRLCYLSAMLYYQFALPRVVFVTAPLAYLLFNLNIIYSSASLIVSYA LPHLFLAIYVGSRMNGRYRYSFWGEIYDIVLAFHLVLPTLVTMIFPKRGKFNVTDKGGLL DVGYFDFTVVRPHLVVACLLALGVVVGIVRAIGHDYFGSDPNVIALNVGWGIYSLIFLLA AIAVARETRQVRKTIRIDVDIPVVIHYASGIVSRSHTADLSMGGCRVAAPDMRHLEDDIE EIELILQSGAISIPAQLVTSDERFLRLKFDEDIPLSRRRELVRVVLARADAWINPPRPQD NPFRSFFTILRCVFELFWLTWKTRRSQRSRTAVAKTAQEDGTL >gi|289775432|gb|GG745511.1| GENE 243 266857 - 269289 2529 810 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0209 NR:ns ## KEGG: Kvar_0209 # Name: not_defined # Def: cellulose synthase BcsB # Organism: K.variicola # Pathway: not_defined # 1 810 1 810 810 1493 98.0 0 MKRLTTLALLAGMFSAPALHSEEPATGASAPLSFPQLNGAADNEPGDEPPAAAPEEATPA VAPAPAGDAALTTPVPEMPAVTPPVSDTVAPDVIPVAPVWGGDLNLAQMGMPDGIILSGG QRQGGVSFTLPSDQVVIHSQLSLAVRVSPEMASRNATLQLMLNGQPLGTLPLGADGEDVS HYQLDIPPALMVSSNNLSVKINDGDTLQCQRDIHDSSRVTVLPTSHFSWESQQLNISDDL SHFPRPFFDSMQMTPADIAVAYGAKPSADVFSAAALVSSWLGIQADYRGIAFSALRDRLP ERHGIVIGHPGEQVGGMTLPETDKPLLRVIANPANPAYKLLLIVGKNDMALRMAAWRLTR GNFAPQTATLDVEPQTIPVGKAYDAPRWIPTDRPVRLSELLRKDQSPTVSGVWHEPLRIA FRAAPDLYLWDGETIPLQVGYRFPSESWINEDKSLLSVTLNGTFLNNLAMNKQGPLEKVW RHLGGDARQERFTIPLAPYLIYGDNQLSMYFNVVPKDDVPCSVLLNNNIKSRITDDSWID LSKTRHFSLLPNLSYFVGASFPFSRLADYSQTTLMLPADPSETQVATLLNLAARSGNATG TALANNRVVLGMPTGGADLQSLRERDVLAVTVLDQQTFNQSLLADSPYRPVDNTLSVREP DLWQKVQRRLTGDWTSASLDADRYFSSSSAWRGFISYRSPWNATRLVVVAMASNDDQLAR LKTDLDSPRINAGIRGDTAVITSDNGVRSFQVSTPFPSGQMPWYMMAVWYASQHSGFLAV LGLIATSIMGLALTAMFKRHARKRLGSGDN >gi|289775432|gb|GG745511.1| GENE 244 269313 - 273341 5224 1342 aa, chain + ## HITS:1 COG:STM3616 KEGG:ns NR:ns ## COG: STM3616 COG0457 # Protein_GI_number: 16766902 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Salmonella typhimurium LT2 # 1060 1337 884 1158 1180 134 34.0 1e-30 MKTSRRLTTFCLTGALTLGAAGGALAAGNDAALQALFAQANYWHEKSHDELAMESLQKVL SVDANNTQALYLMALWSQQGGDMQAAAQWRARLAKAAPDSPGLQDLDNAKKMSQVPQGQL SLARQQARGGNIPGALATWRSMFNGNTPPAGLAAEYYLTMASDKSLYPQAISELRQYVAQ HPQENAPRVALGKALTWREETRREGIALLEPMASGNKEADSGLRQALLWLGPQAGDEQYY DTWMQRHPQDSEVQNYFRERRSGQARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALA GMGYIAQRSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQ ALALSAPLAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYV LREQNKSAEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLRE GVARYPDDPWLRLDLARLLQKSGNGSEASSLMSAAYRPGASNNALYAAALFASENGAWQQ AQTLLARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAP ADAGKLARLLAESGDLTTAVSLVRNNISSGVSGNAGDYADQIAVLNQAGLTGEAQNLLTN PQLQASSTPTQLASIRNGYVINEADRLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARL YQSGKMNKEAGVVYDYLMTRDTPNQDARAGAIDVALSAGNNDRAEQLAGGLRQDNSPDRL LLLARVAEAQGHHQQAMTYLRSARGKLLGMQSTNSSETPTVGGVLAADNPFIGVSQTSAP TRTASTYGQYMPWQVAQSAAAPGSTLPGIQRPDLPVDTAETRMLRQVDTMMESLQEKTGS WLQGGMDVRGRDGESGTSKLTELRTPLTWSSSPFGDSRFDFTVTPVSLNAGTASGDAWRR YGANPLANAVSNMVSTATSEQAAIASMTEAERTAYFASNPGAEALSGLGTLNAADFNPTT SSGMENLAKLGSYDSGQVASYLASSSRKPNVDQTSGSTDSQKANGVELALALSGDDYRVD IGSTPLGQDLNTVVGGVKWSPKLSNYLSLILTGERRSLTDSLLSYVGLKDAYSGKTWGQV TKNGGTLQLSYDDGDAGFYVGGGGYSYLGQNVASNTSINANAGVYLRPYHDEYRQLQTGL SMSYMDYSKNLSYFTYGQGGYFSPQNYVSVSLPVSLTEKYDNWTMKLGGSVGYQSYSQDK SAYFPTNSEWQQTLETAVSNGFAKEAYYSATSKSGIGYTLRAGADYKVNKQMTLGGQIGY DTFGDYNESTAGLYIRYMLGDH >gi|289775432|gb|GG745511.1| GENE 245 273341 - 273817 448 158 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0211 NR:ns ## KEGG: Kvar_0211 # Name: not_defined # Def: cellulose synthase operon protein D # Organism: K.variicola # Pathway: not_defined # 1 158 1 158 158 324 100.0 8e-88 MMTENNNPVVTTWFQQQQTPAGWFDLLVIMVEGMLNNAGELESQPFLRQMGASLAETHPL PASETVGELEANINRLLTHFHWGVVTIDVGEDGLRLRHQALPVSRDDAGRVRWCNAFCAI LEGLYSRWLQSQGGSAHVVLQRERVFSVSDVQFLYYHP >gi|289775432|gb|GG745511.1| GENE 246 273829 - 274830 1443 333 aa, chain + ## HITS:1 COG:AGl3023gl KEGG:ns NR:ns ## COG: AGl3023gl COG3405 # Protein_GI_number: 15891628 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 252 35 262 351 157 40.0 4e-38 MPLRALVAVIVTTAVMLVPRAWADTAWERYKARFMMSDGRIIDTANGNVSHTEGQGFAML LAVANNDRPAFDKLWQWTDSTLRDKSNGLFYWRYNPVAPDPIADKNNASDGDTLIAWALL RAQKQWQDKRYAIASDAITASLLKYTVVTFAGRQVMLPGVKGFNLNDHLNLNPSYFIFPA WRAFAERTHLTAWRTLQTDGQALLGQMGWGKSHLPSDWVALRADGKMLPAKEWPPRMSFD AIRIPLYLSWADPQSALLAPWKAWMQSYPRLQTPAWINVSTNEVAPWYMAGGLLAVRDLT LGEPQEAPQIDDKDDYYSASLKQLVWLAKQDQR >gi|289775432|gb|GG745511.1| GENE 247 274938 - 276617 1987 559 aa, chain - ## HITS:1 COG:no KEGG:KPK_0217 NR:ns ## KEGG: KPK_0217 # Name: bcsG # Def: cellulose biosynthesis protein BcsG # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 559 1 559 559 1050 99.0 0 MTNTKPTATPLPLWQYWRGLGGWNFYFLVKFALLWAGYLNFHPMLNLVFLAFLLVPIPRE KLHRIRHWIAIPLGFALFWHDTWLPGPETLLSQGSQIAGFSASYIWDLIVRFINWSMVGA FFVLLVLWLFISQWLRVTVFVSAMVVWLAVSPLLPAFTLWPAGQPTTAAATTAPANTGAN AAAGTATSPASSNIPPQTEPPTSANLTNWLNGFYAAEQKRKTPFPDQLPADAQPFDLLVI NICSLSWSDIEAAGLMDHPLWKHFDIVFKNFNSATSYSGPAAVRLLRASCGQLSHTNLYQ PSGADCYLFENLAKLGFNQQLMLGHNGLFGDFLKELRSLGGMQSPLMDQTGLPVSLQAFD GSPVYEDLAVLNRWLKTEEASNNPRSATFYNTLPLHDGNHFPGQSKTADYKVRAQKLFDD LDNFFTELEKSGRKVMVVVVPEHGGALKGDKMQVSGLRDIPSPSITNVPTAVKFFGMKAP HEGAPIIIDQPSSYLAVSELVVRALDGKMFSEDSVNWQQYVANLPQSAAVSENANAIVIQ YQGKPYVQLNGGSWVPYPQ >gi|289775432|gb|GG745511.1| GENE 248 276614 - 276811 194 65 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0214 NR:ns ## KEGG: Kvar_0214 # Name: not_defined # Def: celllulose biosynthesis operon protein BcsF/YhjT # Organism: K.variicola # Pathway: not_defined # 1 65 1 65 65 111 100.0 9e-24 MMSIADILQLVVLCALLFFPLGYLTRHYQRRIRTTLRLMFFKPRYVKPAGVLRRGATVKQ GKANK >gi|289775432|gb|GG745511.1| GENE 249 276811 - 278310 1389 499 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0215 NR:ns ## KEGG: Kvar_0215 # Name: not_defined # Def: cellulose biosynthesis protein BcsE # Organism: K.variicola # Pathway: not_defined # 1 499 19 517 517 1014 99.0 0 MPVGGVWWLNVDRYTDAVSLFNQTLAAQAKNSKIAALVMGDKPNNIISLDNEGGPDNIAL FTLPNRPEALEEIHRDLVCSLEPGNYLFILLCAENTWQNINKDKLCAWVEKTSRWAQYHR CAFLAINSAQDIDRQLTPLLREYRSLSGLASIRYQGDRHLFDIAWWGSDKGISAQQQLMV QHDDAGWRLAQETETSVQPRSDEKVILSNMRVLEGAPPLSEYWTLFDTNDEVFNAGRTAQ AATVLFSITQNTQIEQLGRYIHTLRRQRGTALKIIVREQTPSLRATDERLLLSSGASLVI PSSASLSRCLTLIESVQNQKSSRHIPEDFATLLTWSQPLKLRGYQKWDAFCEAVQNVMAN TLLPADSKGVMVALRPAPGLRVEQALTLCKPNRMGDIMTIGNNRLVLFLSFCRINDLDTA LNHIFPLPTGDIFSNRMVWFEDKQILSEIVIMRGVEPARWNTPLPLSVGKNETINATHDG RHWRRYPEPHRLTTREEQA >gi|289775432|gb|GG745511.1| GENE 250 278533 - 278721 171 62 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0216 NR:ns ## KEGG: Kvar_0216 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 62 1 62 62 113 100.0 2e-24 MPAKDPAVPTDATLGYTFQNDFLALSRAFSLPDIDYHDISRREQLNAALKRWPLLAEFAE KK >gi|289775432|gb|GG745511.1| GENE 251 278733 - 279464 877 243 aa, chain + ## HITS:1 COG:STM3620 KEGG:ns NR:ns ## COG: STM3620 COG1192 # Protein_GI_number: 16766906 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 241 1 243 250 343 70.0 2e-94 MAILGLQGVRGGTGVTSITAALAWALQLLGETVLAIDASPDNMLRFFFNTDVHHQDGWAR ALLDGRDWRDAGLRYTQHIDLLPFGQLSAGERENADQLQPALGAMAEAVQRLQSQYRWLL LDLPNGYSPLTRELLTLCDRTLVVVHPDANSHIRLHQQPLPANSDILINDLRVGSQLQED LYQLWLESQPRILPVTIHRDEAMAECLAAKQPLGEYRQDSLAAEEVLTLANWCLIHYSGG RAE >gi|289775432|gb|GG745511.1| GENE 252 279461 - 282079 3087 872 aa, chain + ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 872 17 888 888 1515 82.0 0 MIRLSTLLLAPPVGERLRARYDDYRQHGASWLSASLGCLWASLVWALMPLETPRWQAILA HHETYFPHINPHRPRPLDPVRYLLQSLWLLATRVPEPEKKVNWRSLAALEGVHGRYTQWL EKLPEQVNARTGHLDKQKELAHLNPKLRRAILGGVTFCSLVLALMCITQPFNPLSQFIFL MLLWGVALLVRRIPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWNDPVSLVCGIILLFAE TYAWVVLVLGYFQVVWPLNRQPVPLPEDMDLWPTVDIFVPTYNEDLNVVKNTIYASQGID WPKDKLNIWILDDGGREAFRQFAKDVGVHYIARTSHEHAKAGNINNALKYAKGEFVSIFD CDHVPTRSFLQMTMGWFLKEKELAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQ DGNDMWDATFFCGSCAVIRRGPLDEIGGIAVETVTEDAHTSLRLHRRGHTSAYMRIPQAA GLATESLSAHIGQRIRWARGMVQIFRLDNPLFGKGLKLAQRVCYANAMLHFLSGIPRLIF LTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWY IAPPTFVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIYLVLLNLVGVAVGIWRFMYG PENEILTVWVSIVWVFYNLIILGGAVAVSVESKQVRRSHRVEMSMPAAIAREDGHLFSCT VHDYSDGGLGIKIHGDAQVLEGQNARLLLKRGQQEYAFSVRVARVNGSEVGLQLLPLTNQ QHIDFVQCTFARADTWALWQDSFPEDKPMESLLDILKLGFRGYRHLAEFSPPSVKVVFRA LTSLVAWIVSFVPRRPERAAPTLSADPAMAQQ >gi|289775432|gb|GG745511.1| GENE 253 282090 - 284435 3009 781 aa, chain + ## HITS:1 COG:no KEGG:KPK_0223 NR:ns ## KEGG: KPK_0223 # Name: bcsB # Def: cellulose synthase regulator protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 781 1 781 781 1490 99.0 0 MKRKLSWMCAVAVGMCSWYPLASYAAPAVVANAAPGVQPQVATPGAPIVVGEPTAALAEP TAPAAVAENVPQREVKLTFATIAPPPGSIVLRGSRPDASVEFGMRSDELVANALLNLEYT PSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKIRAQLPIDPLYITDFNRVRLEFVGHY RDVCENPASSTLWLDVGRESYLDLTYQSLKVHNDLSHFPVPFYDPRDNRPLTLPMIFPGS PAVAQQQAAAIVASWFGSKAGWRGQQFPVYFNELPDRNAIVFATNDKRPDFLRDHPPVKA PTIEMIDNPNDPYVKLLVIFGRDDNDLLLAAKGIAQGNILFRGSSVTVDGIKTLQPRQPY DAPNWVRTDRSVTFAELKTYEQQLQSSGLVPDAITVALNLPPDLYLLRANGIDMDLKYRY TMPPVKDSSRMDISLNDQFLQSFSLNSAQDVNKLILRLPVLQGLLDGKSEVTIPALRLGA VNQLRFDFQYMNPMPGGSIDNCITFQPVQNHVVIGDDSTIDFSKYYHFIALPDLRVFANA GFPYSRMADLSDTLVVVPKAPTQGQVATLLQALGGIGSQTGLAAINLQMTDDGNQIKNKD ADLLLIGAIPSSLKDDTKINLLVEATKSWVKMPMRHYDLASIYPDDDARTPNTRTDITSS GPMAAVIGFQSPYNDQRSVVALLADSPRGNELLTNALNDSGKRAAMFGSVAVIRESGVNS LRVGDIYYVGHLPWFERIWFALSNHPILLAIFAAISIVLLAWVLWRMLRIISRRRLSLDD E >gi|289775432|gb|GG745511.1| GENE 254 284439 - 285548 1349 369 aa, chain + ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 2 369 1 368 368 549 72.0 1e-156 MMKVLCGAVLSALLLAAGPVSAACQWPAWEQFKKAYVSPEGRVIDPSDARKISTSEGQSY GLFFALAANDRAGFDKLLTWTQNNLAEGDLRQHLPGWLWGKKDDEQWTLLDSNSASDSDL WIAWALLEAGRLWQQPQYTETGKALLARIVEEETVAVPGLGTMLLPGKVGFADDSGWRFN PSYLPPQLATYFVRFGAPWPALRDSNLRLLLETAPKGFIPDWVRYEKGKGWQLKTEKPLI GSYDAIRVYLWVGMLHDGDKQKARLLQRFAPMAAQTTEQGVPPEKVNIATGKTSGQGPVG FSAVMLPFLQDDEARSVQRQRVADNYPGADAYYSAVLTLFGQGWDQHRFRFTAGGELQPD WNQECASSH >gi|289775432|gb|GG745511.1| GENE 255 285530 - 289009 4380 1159 aa, chain + ## HITS:1 COG:STM3616 KEGG:ns NR:ns ## COG: STM3616 COG0457 # Protein_GI_number: 16766902 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Salmonella typhimurium LT2 # 2 1159 25 1180 1180 1467 68.0 0 MRKLSLSLLTLSLGVALLPLAQAATTPAQEHLLEQVRLGEASNREDLVRQSLYRLELIDP NNPDLIAARMRYLLRQGDAAGAQKELERLTKLAPDSPELKASRNEMKSNTGEGRQALQQA RLLGVAGKVDEAIAAYEKLYGGVPDDVDVAIEYWTLVARLPARHSEGVSQLKKLNASAPG NVSLLTSLAKQMFADNKPQEGFAYLAEMARSASGRGIAADMWFSEVKSMPVSKASVQALQ QFLLQFPTGSVAANARVLLDQQQAQLQDPTFRARSEGLAAVKSGNASQAVADLQKAVQAD SRDSDAVGALGQAYSQRGDRARAVAQLNKAIAMDPDSPNRGKWDSLLQTNRYWLLIKQGD NALKAGQLSQAQNYYAQAQRVDRTDSYAVLGLGDVAAARKESAAAERYYQQALRLDRGNN LAVRGLANLYRAESPEKASAWIAGLPPAQRRSIDDIERSLTNDRLEKQAQALESQGNWAQ AAEVQRRRLALDPDSVWITYRLARDLVSAGERQEADALMRAMVNRQPQDAERVYASGLYL SGNDQDDLALAQIAALPRSAWTDNIRELEARLQSDRVLRQANQLRDSGNEAQAIALIQQQ PASVRYDLTLADWAQQRGDSQTAIADYQRVLRQEADNGDARLGLAEVYLAEGDKQAARAQ VMQLKGAETESMNMQRRVALARAGLGDTADAQQIFNQIVPQAKAQPPSMESALVLRDAAR FATQTGAPQQALTHYREAMVASGIAPVQPQNNDTFTRLTRNDSQDDWLKRGIRSDAADLY RQQDLNVTLEHDFWGSSGTGGYSDLKAHTTMLQVDAPLADGRMFFRTDLVNMDAGSFSTH SDGSYSPSWGTCGEIACTSGSKNQTDSGASVAVGWKNDTWSGDIGTTPMGFNVVDVVGGL SYSSDVGPVGYTVNVHRRPISSSLLSFGGQKDSSSHTGTTWGGVRADGGGLSLSYDRGEA HGIWSSLGADSLTGKNVADNWRVRWMTGYYYKVINENNRRVTVGLNNMIWHYDKDLSGYT LGQGGYYSPQEYLSFAVPVTWRQRTENWSWELGGSVSWSHSRTQTQARYPLLNLIPSDYR QRASELTEEGSSSQGFGYTARALVERRVTSNWFVGAAVDIQQAKDYTPSHALLYVRYSAA GWQGDLDMPPQPLVPYADW >gi|289775432|gb|GG745511.1| GENE 256 289253 - 291259 2114 668 aa, chain + ## HITS:1 COG:ECs4409_3 KEGG:ns NR:ns ## COG: ECs4409_3 COG2200 # Protein_GI_number: 15833663 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 400 659 1 260 263 326 63.0 1e-88 MRVSRSLTIKQMAMVASVSMAFVLVFCTILLFHFVQQSRFTTATQLESIARSVREPLSAA ILKADIPEAEAILSRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVTVTRLFELPVQI SLPIYSLERPANPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLMLTVALTWCINR LMVRPLRRIARELNDLSQQDRLGHQLTLPRLHHDDEIGMLVRSYNRNQQSLVRQHDELSI QSTRFPVSELPNKAFLLAMLEQTVARPQSAALIVVACETLQDAAGVLKESQREMLLLTLV EKLRAAIPPQMVLAQVSGYDFAILADGLAEPWQAVTLSKQVLTIINERLPLHGLQLRPYA SVGIAMFHAGLSAEQFYRRAVSAAVTARRKGKNQIEFFDPEQMEKAQRRLMEEHDIITAL DNQQFAIWLQPQVACASGEICGAEVLLRQRQADGSWSLPPSLIERIESCGLIIPVGYWVM EEACRQLAAWQSQGIMLPLSVNVSLLQLLEHDRGEEMLKLIARYRIAPGTLILEVTESCR MDDPQDVMARLRPLREAGVQIALDDFGMGYAGLHQLQQMKALPVDILKIDKVFIDMLPED VSMVPAMIQLARGLSLRIVAEGVENDAQYRWLQAAGVEVLQGHLFGCALPLEAFSARYLS PVREDENL >gi|289775432|gb|GG745511.1| GENE 257 291416 - 292702 1836 428 aa, chain + ## HITS:1 COG:dctA KEGG:ns NR:ns ## COG: dctA COG1301 # Protein_GI_number: 16131400 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli K12 # 1 428 1 428 428 694 93.0 0 MKTSIFKSLYVQVLTAIAIGILLGHFYPELGAQMKPFGDAFVKLIKMVIAPVIFCTVVTG IAGMESMKAVGRTGAVALLYFEVVSTIALIIGLIIVNVVQPGAGMNVDPSTLDAKAVAVY AEQAKDQGVVAFLLDVIPGSVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIES FSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVVVLGS IARATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLVVLLLSSKGAAGVTGSGFIVLAATISA VGHLPVAGLALILGIDRFMSEARALTNLVGNGVATVVVAKWVKELDAKQMDDVLNNRVPA NKSHELSS >gi|289775432|gb|GG745511.1| GENE 258 292965 - 294425 1874 486 aa, chain + ## HITS:1 COG:yhjJ KEGG:ns NR:ns ## COG: yhjJ COG0612 # Protein_GI_number: 16131399 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli K12 # 1 486 15 498 498 738 78.0 0 MVAAAGYVQAEALQPDPAWQQGTLANGLTWQVLATPQRPSDRIEVRLSVNIGSLSESTQQ SGFSRFVPRLALTQSGSLPTMQARSLWQQSIDPKRPLPPAIVSYDYTMFNLSLPNNRNDL LKEALSWLADASGKLTITPESINHALQGSDMVATWPLDTKEGWWRYRLKGSTMLGHDPAA PLKQPIDVAQLKDFYHKWYTPDAMTLIVVGNVDSRSVAEQISKTFGDLKGKRETPAAVPT LSPLPTVPVSIMTSAVRQDKLSIMWDAPWQPIRDSAALQRYWRDDLAREALFWHVQQSLS KNNVKDIGLGFDCRVLYQRAQCAINIESPGERLNNNLSVVSRELAKVRDNGLPQEEFDAL IAQKSLELQRLFATYARTDTDILMSQRMRSLQNQVVDIAPEQYQKLRQEFLNSLTVDMLN QYLRQQLSQDMALVLQQPKGEPEYNMKELQATWEKLMAPNPAAAAVSGSADTVDAHSEAS DIPPGQ >gi|289775432|gb|GG745511.1| GENE 259 294479 - 295408 1209 309 aa, chain - ## HITS:1 COG:ECs4406 KEGG:ns NR:ns ## COG: ECs4406 COG0524 # Protein_GI_number: 15833660 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 308 74 381 382 535 84.0 1e-152 MSKKIAVIGECMIELSEKNGAVNRGFGGDTLNTSVYIARQTDASALSVHYVTALGTDAFS QQMLDSWQQENVNTDLIQRMADRLPGLYYIETDDTGERTFYYWRNEAAAKFWLESDRAAA ICEELATFDYFYLSGISLAILSPASRDKLFTLLRECRANGGKVIFDNNYRPRLWASQAET QQVYQEMLACTDIAFLTLDDEDALWGEKPVAEVIARTHAAGVEEVVVKRGADACLVSVSG QPLQEVPAVRLAKEKVVDTTAAGDSFSAGYLAVRLTGGDAESAAKRGHLTASTVIQYRGA IIPREAMPQ >gi|289775432|gb|GG745511.1| GENE 260 295603 - 297654 2300 683 aa, chain + ## HITS:1 COG:yhjG KEGG:ns NR:ns ## COG: yhjG COG2982 # Protein_GI_number: 16131396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli K12 # 1 683 6 691 691 1065 77.0 0 MSRTRKTLVIITGTILLLIVLFLIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVW ERQPDERGWRSWIPWPHVHAEDIVLGNPPAIPQVTMIHLPRVEATLAPLALLSKTVYLPW IKLEQPDVRLIRLAEDNNNWTFQLAGDQRTSGDSAPSSWSFRLDNILFDRGTIAIDDKIT RSDITILVDPLGKPLPFSEVTGTKDQHSAAKVGDYVFGLSLKGRYKDQPVTGNGKIGGML ALRSASTPFPLQGDFHSGNTRVAFSGTVSDPLNVGGIDLRLKFAGDSLRDLYDLTGVLLP ETPSFSTDGRLRADFKQKNRMRFDYQDFNGRIGDSDIHGSLTYTTGKPRPKLSGDMESKQ LRLADLGPLIGVDSGKGTKKGAARQAGDRPQPAGKVLPADRFETDKWQVMDADVRFKGRR IEHGGTLPISDLSTHVILEDGDLRLQPVRFGLANGSIAGSVHLQGDKKPLQGEANLQARR LKLKALMPNVEMMQKTLGEMNGDVQLRGSGNSVAALLGNSNGNLKLLMNDGLISRNLMEI LGLNVGNYLIGQIFGDEEVRVNCAAANIDVTNGVARPQIFAFDTENALINVTGTASFASE QLDLTIDPESKGFRVITLRSPLYVRGTFKSPQAGVKAGPLIVRGAVAAALATLVTPAAAL LALISPAEGDSNQCRTILSQMKK >gi|289775432|gb|GG745511.1| GENE 261 297692 - 299014 2227 440 aa, chain - ## HITS:1 COG:ECs4403 KEGG:ns NR:ns ## COG: ECs4403 COG0477 # Protein_GI_number: 15833657 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 440 1 440 440 633 92.0 0 MQATATTLENSQETAPVNSRNKVVVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDAA AATLQSLATFAIAFVARPIGSALFGHFGDRVGRKVTLVASLLTMGISTVVIGLLPGYESI GIVAPMLLALARFGQGLGLGGEWGGAALLATENAPARKRALYGSFPQLGAPIGFFFANGT FLLLSWLLTDQQFMEWGWRVPFIFSAVLVIIGLYVRVSLHETPVFAKVAAAKKQVKIPLG TLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTGTAPNGLGLPRNEVLWMLMMAVIG FGVMVPVAGLLADAFGRRKSMIVITTMIILFALFAFKPLLGSGNPLLVFAFLLLGLSLMG LTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIAAWLQGNYGLAAVGTYLAA MAALTLIALLLTHETRHQSL >gi|289775432|gb|GG745511.1| GENE 262 299286 - 300317 1419 343 aa, chain - ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 342 1 336 337 556 82.0 1e-158 MTPENDDRRPPQEPDTQPEKNKSPLDALNDTAVGQKASQALKTVTGTAAKVQRNPVIAHL LRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDKILQNV SDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWERRPQD EEKIWIKYFRDLISLIGLLVALIITLSITSVAGSAQQLIISALYLDNIEWLKPAWRLIGL AISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVKSPSGA AFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMPGKTHR >gi|289775432|gb|GG745511.1| GENE 263 300424 - 301323 1117 299 aa, chain - ## HITS:1 COG:STM3607 KEGG:ns NR:ns ## COG: STM3607 COG0583 # Protein_GI_number: 16766893 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 296 1 296 299 436 71.0 1e-122 MDKIHAMQLFIRVADLESFSRAAETLALPKGSVSRQIQALESHLGVRLLHRTTRRVQLTQ DGMVYYERAKDLLSNLDELDGMFQHDPASISGRLRVDMPVGFAKKLVIPHLPTFLQQYPG IELELSSSDRLVDVIREGFDCVVRVGALKDSGLIARPLGKLTQINCASPDYLARFGYPQS LEDLADHALIHYASTLGVRPPGFEVVIDGAVRWIKTGGILTVNSTETYQAACIAGLGIIQ VPRTGVREALRAGDLTEILPQYRAEPLPVSLIYPHRRNLSRRVHLFMEWLGGLMKDYVD >gi|289775432|gb|GG745511.1| GENE 264 301443 - 302201 185 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 248 1 238 242 75 28 2e-12 MTQRIALVTGGSRGLGKNAALKLAAKGTDILLTYHSNRQAALDVVAEIEQKGVKAAALAL NVGDSSTFDAFASEVAQVLAQKWGRTTFDYLLNNAGIGLNVPFAETSEAQFDELMNIQFK GPFFLTQRLLPLLQDGGRILNVSSGLARFALPGYAAYAAMKGAMEVLTRYQAKELGGRGI SVNIIAPGAIETDFGGGVVRDNAEVNQHIAAQTALGRVGLPDDIGDAIAALLSDELAWMN AQRVEVSGGMFL >gi|289775432|gb|GG745511.1| GENE 265 302236 - 302769 172 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227395847|ref|ZP_03879169.1| acetyltransferase, ribosomal protein N-acetylase [Haliangium ochraceum DSM 14365] # 1 173 13 183 193 70 30 8e-11 MPELLTPRLRCSPLQLDDWSFFLSLQQDPQVMLYVADPRPQAAIREAFDSRLPPWAPGDE HWLCLVVRDRLTHTPLGLTGYQHHQRDIAEVGFLFAPAAQGRGYGYESLRALCDYAFTTG GVRRLTASVTAGNEASKQLLLKAGFRLEGELRENYWLNGRWHNDWLFGRLRGEGDAP >gi|289775432|gb|GG745511.1| GENE 266 302836 - 304488 2321 550 aa, chain - ## HITS:1 COG:ECs4399 KEGG:ns NR:ns ## COG: ECs4399 COG1626 # Protein_GI_number: 15833653 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 957 84.0 0 MFSQKLRHVEDDELRIDIDPCYEADPYELKLDEMIDAEPEPEVIEGLPASDALTPADRYL ELFTNVQKSRIFADSKTFPDCAPKHDPLDILRNYRKVKRQPDFDLRQFVEDNFWLPENQT DVYTSDPSLTLKEHIDKLWPVLTREPQDHIPWSSLLALPQAYIVPGGRFSETYYWDSYFT MLGLAESGREDLLKCMADNFAWLIETYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR GAKRYLDHLKMEHAFWMDGAESLIPHQAYRHVVRMPDGSLLNRYWDDRDTPRDESWREDV ETARHSGRPANEVYRDLRAGAASGWDYSSRWLRDITRLASIRTTQFIPIDLNAFLFKLET TIANLSGLKGDRETEAAFRQKAQDRRAAVNRYLWDDENGCFRDYDWRREQLALFSAASIV TLYVGLATHEQAERLADAVRARLLTPGGIMATEYESGEQWDKPNGWAPLQWMAIQGFKRY GQDPLGDEIAWSWLQTVNHFYKQHHKLIEKYHIATGVPHEGGGGEYPLQDGFGWTNGVVR RLIGLYGEPT >gi|289775432|gb|GG745511.1| GENE 267 304728 - 305921 1427 397 aa, chain - ## HITS:1 COG:VC1147 KEGG:ns NR:ns ## COG: VC1147 COG1454 # Protein_GI_number: 15641160 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Vibrio cholerae # 20 392 9 384 422 207 34.0 2e-53 MCIVDSSLFAEKEPDMLTPFTVLMPANIRFGRGQALSAAPWLAQQGGPILLVHGASPQRA AFLRHQLEALQLEVTTLAISREPWLIDIEQGVQLAREKGVRAVVSLGGGAVIDTGKAIAA LVPAAGPLVDYLEVVGTGRQLEASPLPFVAIPTTAGTGAEVTKNAVINVPEQQRKVSLRD DRMLPDLAIVDPALTDNAPRSITLSSGLDALTQVIEPWLCSRATPFTDALCQQAIPRGIR ALKILMEQECPASRDEMAWVSLCGGLALANAGLGVIHGLAGPLGGLSRASHGALCGSLLP FGLALNESQISDPALRQRFNDVRRWLADGLDVPVDRVWDSLREWSHRAGLGTLRDLGVAR DALEPAALAASTSSSMKANPVSLSGEQLLEMLEAAWE >gi|289775432|gb|GG745511.1| GENE 268 305991 - 306635 726 214 aa, chain + ## HITS:1 COG:PA1890 KEGG:ns NR:ns ## COG: PA1890 COG0625 # Protein_GI_number: 15597087 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pseudomonas aeruginosa # 8 213 1 206 207 234 55.0 1e-61 MAEESLTMLTILGKRSSINVRKVLWTCEEAGLAYQQEDYGSGFKPLDTPEFQRLNPNSLV PVLLDGDFVLWESNSICRYLARKAERWDLLPAEPQPAAEVEHWMDWQATEFNTAWRHAFM GLVRKDPRFQDPAAIKESIATWTHCVRIVEAQLQRTGAWIAGECFTLADIVLGLSVHRWK MTPFAHPEMPAVERWYMALNQRPAFMRHGNNGVA >gi|289775432|gb|GG745511.1| GENE 269 306688 - 308040 495 450 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 444 1 442 458 195 31 3e-48 MSKHYDYLAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIR EAIHLYGPDYGFDTTINHFDWEKLVASRSAYIDRIHTSYDNVLGKNNVDVIKGFARFVDA HTVEVNGETITAEHILIATGGRPSHPNIPGVEYGIDSDGFFELPALPKRVAVVGAGYIAV ELAGVINGLGAETHLFVRKHAPLRSFDPLIVETLVEVMNAEGPQLHTNAIPKAVVKNADG SLTLELEDGRSQTVDCLIWAIGREPATDNFNLAATGVKTNEKGYIVVDKFQNTNVPGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPEEHLDYSNIPTVVFSHPPIGTVGLTEPQAR EQYGDDAVKVYKSSFTAMYTAVTSHRQPCRMKLVCVGPEEKIVGIHGIGFGMDEMLQGFA VALKMGATKKDFDNTVAIHPTAAEEFVTMR >gi|289775432|gb|GG745511.1| GENE 270 308113 - 308955 1187 280 aa, chain - ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 524 92.0 1e-149 MLSYRHSFHAGNHADVLKHTVQSLIIEALKEKEKPFLYLDTHAGAGRYQLSGEHAERTGE YLEGIARIWQQDDLPAELEPYISVVEHFNRNGQLRYYPGSPLIARQLLREQDSLQMTELH PSDFPLLRAEFQKDSRARVDKADGYQQLKAKLPPVSRRGLILIDPPYEIKTDYQAVVTGI HEGYKRFATGTYALWYPVVLRAQIKRMIKELEATGIRKILQIELAVRPDSDQRGMTASGM IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE >gi|289775432|gb|GG745511.1| GENE 271 309149 - 310420 1810 423 aa, chain + ## HITS:1 COG:STM3595_1 KEGG:ns NR:ns ## COG: STM3595_1 COG0671 # Protein_GI_number: 16766881 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 355 1 355 355 504 72.0 1e-142 MKRQLSLLAVALLLAQPVLAKDIPLDRAAALANSVTPAASSQAYDDLEQQALTQLRHALQ GDAATLTRDRLAHTKQNKTQADTAWLKASGYDFQTRANQQAGIALLSAFSTLPETVVKQN LATVTSINRDAAQTTRRQALVDAEGISYLYFLSDALGPRLGKAFLTAYDQGALGKAAALI KASEVSTGEAKKHFNNPRPFLVQGNTIHLVPDDVVVKDNQPYTADGGSFPSGHTNTGYTD ALLLAAMIPERYDALVTRGARYGYSRIVLGVHYPLDVIGSRMVAERNVAHYLNDPHYRVL FNEARDQLRAALAKACGTSLAECAKSSVKDDPWRDPAMRDFSRFTMTYDLPQQKGPQPRL QVPEGAEVLLEAALPQLSAAQRRALMANTALPAGYPLSGATPEQQFWQRLNLSAAWEMAQ KRH >gi|289775432|gb|GG745511.1| GENE 272 310603 - 312645 3184 680 aa, chain + ## HITS:1 COG:STM3594 KEGG:ns NR:ns ## COG: STM3594 COG0339 # Protein_GI_number: 16766880 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Salmonella typhimurium LT2 # 1 680 1 680 680 1300 94.0 0 MTNPLLTPFSLPPFSAIKPEHVVPAVTKALDDCRAAVESAVAHGAPYSWENLCQPLAEVD DVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDNYA TLNTAQKKAVDNALRDFELSGIGLPPEAQKRYGEIAARLSELGNQYSNNVLDATMGWNKL VTDVADLAGMPESALAAAQAQAQAKEQEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYS TRASDQGPNAGKWDNSPVMAEILALRHELAQLLGFDSYAFKSLATKMAEDPQQVLDFLTD LAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPEN KAVNGLFEVVKRIYGITAKERTDVDVWHPEVRFFELYDEHNELRGSFYLDLYAREHKRGG AWMDDCVGQMRKLDGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLT RIDTAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPQELLEKMLAAK NYQAAMFILRQLEFGLFDFRLHAEYKPEQGAKILETLAEIKKQVAVVPGPTWGRFPHAFS HIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMVLFK RFRGREPQLDAMLEHYGIKG >gi|289775432|gb|GG745511.1| GENE 273 312749 - 313405 1031 218 aa, chain + ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 217 33 249 250 407 98.0 1e-114 MALVLTTEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDV VDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA SSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLAPARQLAT KRVVVKRPDYAPPLAEVATPNAVVTKGHRFDIYAGTPE >gi|289775432|gb|GG745511.1| GENE 274 313551 - 315023 2512 490 aa, chain - ## HITS:1 COG:STM3592 KEGG:ns NR:ns ## COG: STM3592 COG3104 # Protein_GI_number: 16766878 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 490 1 489 489 804 93.0 0 MNTTAPTGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFA ALVYGLISIGGYVGDHLLGTKRTLVLGAIVLAIGYFMTGMSLLKPQLIFIALGTIAVGNG LFKANPASLLSKCYPPKDARLDGAFTLFYMSINIGSLLSLSLAPVIAEKFGYAVTYNLCG AGLIIALLVYFACRGMVKDIGSEPDHRPLSLRNLALVLAGTVVMIFLCAWLMHNVMVANL VLIVLSIVVIAFFFREAFRLDKTGRNKMFVAFILMIEAVLFYILYAQMPTSLNFFAINNV HHEILGFTINPVSFQALNPFWVVVASPVLAAIYTHLGHKGKDLTMPVKFTLGMLLCALGF LTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELLISALGLAMVAALVPQHLMGFILGMW FLTQAAAFLLGGYVATFTAVPENITDPLQTLPVYTNVFSKIGLVTLGVTVVMALMVPWLN RMINTPASAE >gi|289775432|gb|GG745511.1| GENE 275 315280 - 315717 816 145 aa, chain - ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 269 99.0 1e-72 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLM SSARQLINTVHVDMLIVPLRDEEDE >gi|289775432|gb|GG745511.1| GENE 276 316100 - 316435 293 111 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0242 NR:ns ## KEGG: Kvar_0242 # Name: not_defined # Def: universal stress protein B # Organism: K.variicola # Pathway: not_defined # 1 111 1 111 111 213 100.0 2e-54 MISTIALFWALCVVCVVNMARYFSSLRALLVVLRGCDPLLYQYVDGGGFFTSHGQPSKQM RLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVVSLIALMIWH >gi|289775432|gb|GG745511.1| GENE 277 316495 - 317991 1706 498 aa, chain - ## HITS:1 COG:STM3589 KEGG:ns NR:ns ## COG: STM3589 COG0306 # Protein_GI_number: 16766875 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Salmonella typhimurium LT2 # 1 498 1 498 498 828 91.0 0 MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVAMAALF NFFGVLLGGLSVAYAIVHMLPTDLLLNMGSAHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVVDALNIPKVIGIFASLIISPIVGLVIAGGLIFILRRY WSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVSFSHGANDGQKGIGLVMLV LIGVAPAGFVVNMNASGYEITRTRDAVNNVETFFQQRPDLLKKATGVDQLVPSPDTNTAA NGEFHCHPANTINALDRVKTMLTGVETYDSLSPDQRGQLRRIMLCISDTTDKVAKLPDVS ADDQRLLKKLKTDMLSTIEYAPIWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYA QGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMLVDGGGLQKKTVTSILMAWVLTL PAAIILSGVLYWLSLKLI >gi|289775432|gb|GG745511.1| GENE 278 318221 - 319414 1312 397 aa, chain + ## HITS:1 COG:STM3588 KEGG:ns NR:ns ## COG: STM3588 COG2081 # Protein_GI_number: 16766874 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Salmonella typhimurium LT2 # 1 394 1 394 398 727 86.0 0 MERFDAIVVGAGAAGMFCAAQAGQLGCRVLLLDNGKKPGRKILMSGGGRCNFTNMYVEPA AYLSQNPHFCKSALARYTQWDFIELVGKYGIAWHEKTLGQLFCDDSAEQIVNLLLAECEK GDVQIRLRSEILSVERDEQGYRLQVNGETLMTKKLVIASGGLSMPGLGASPFGYKVAEQF GLKVLPTRAGLVPFTLHKPLLEQLQVLSGVSVPSTITAENGTLFRENLLFTHRGLSGPAV LQISSYWQPGEFVTVNLLPDCNLEDFLNEQRSAHPNQSLKNTLAMQLPKRLVECLQQLGQ IPDVTLKQLNVRDQQTLVETLTAWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKAS GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQALVEG >gi|289775432|gb|GG745511.1| GENE 279 319446 - 321329 1244 627 aa, chain - ## HITS:1 COG:CAC0459 KEGG:ns NR:ns ## COG: CAC0459 COG3829 # Protein_GI_number: 15893750 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Clostridium acetobutylicum # 17 619 12 626 627 294 32.0 5e-79 MKNNEIVIFSVSSTITQRIMNVLIERKLEIPVYEFRYSDVLNKANEMIQSGTRIIISRGG TAALLRNNIPIPVIEIAHDFHGVYRILQEAKNKSQKIAAIGFPQFCRALRHYQSMTNDEF KICQVYNHHDIENVIKNLSENGYHMVIGGLTVAEMAKKYNLNVIEGDADNNSIEQAINEA HGLLKYINRENLKLVMSHAALNQSREGIMCVDQLGEIININAIGMTLFQCQVGDKIFKKE AFKDIYASMINESNIKEQTIEINGTLVCISVRHFSNRQNTYAIITGLSQESTLWQQTNSK KSKLRGYATSYSFDNIIAQSPIMHQVIQKARLCAQHDLPVHLLGDTGTGKELFAQSIHHV SARSHGPFIAINCAAIPESLLESELFGYAEGAFTNARKGGKPGVFEMATNGTVFIDEISE APLSVQVKLLRVLQEKQFSRLGGDSLLSADFRLITASNKDLGQLIASGEFRQDLYYRINI LELQLPPLRERPEDIMVLIHHLLQQQNKHLTFTPDAVNCLQNYEWPGNIRELQAVIYRLI VLLEGDTVDKAVLQQISHLSPPCHQGVSLVADLAVVADESDLLKKQEKQLIASVIEKTDG DRTKASAILGISPTTLWRKLKQHNISG >gi|289775432|gb|GG745511.1| GENE 280 321471 - 322634 1063 387 aa, chain - ## HITS:1 COG:STM4413 KEGG:ns NR:ns ## COG: STM4413 COG3964 # Protein_GI_number: 16767659 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 1 387 2 378 387 266 40.0 5e-71 MKLDIVIKNGQIADIENRTYINADIGIKGNRIVDISHHSDLQAETVIDASGCIILPGLID FHGHVFHGGTAISVNPDIVCLPNGVTSMVDAGSSGWVNYSLFRNSVIHPAMVKIKSYLNV VNVGLSTLGGGPTGYLENTNPANYNEEKIAQTLNDNKDNILGLKLRYSQDIARGKQYASD PLLATVALARKLETSICVHVTDSLLCADELIRYFEEGDIYAHCFHGTGHSILNEQGQVYA AIKEAQSRGVIFDCSNGVAHFDFKVAQSAMEQGFYPDIISTDLTLRNSLRTDKVYSLLHV MSKYLNMGMPFFDVIRAVTATPARLMKMQGQIGTLAANAIADISIVKLRKDKITFEDTRG KTLEGDCYLDNCATICNGQIVYRRLRF >gi|289775432|gb|GG745511.1| GENE 281 322647 - 324041 1686 464 aa, chain - ## HITS:1 COG:YPO0081 KEGG:ns NR:ns ## COG: YPO0081 COG0471 # Protein_GI_number: 16120432 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Yersinia pestis # 5 463 7 472 475 316 38.0 8e-86 MLYLKLLPIIFFPVLFWIIPHPEGVAAPTWHMVGIYLAMLCGLVLRPFTDAVIMLIILGF ASLVLDPGPLFAGFGSPMVWFIISAFIICKAFVITGLGKRIAYLLLKRYGKNTLTLGYLM MVTDTVLAPATGSNMSRSGGITYPIFRNIAEALGSKPDDGSRKIGAYLTILMYVVSMGTS SLFLTGMATNSITVSLANEIMKVNLEWMTWFKAAVVPAGLVLILAPWILYKIYAPELKVI ENVNEIAEKGLNELGPVKREEKLLIVFFILGVLGWMTGSITGIAFIPVGLAFLACLLLFG VLSWNDVVSEKSAWQTFVWYGAFYGCAVALSKGGFYVYLVDVIKNYLDLSHLSEISAIAV LVFISLAVRYFFVSNSAFVVSFYPVLFTLGMTTQAHPMYVALSLAFSAGYGALLTHYGNG AGVFTFSSGYVPQKTFWMLGTIMVVVNVLIFFLIGIPYWKLIGI >gi|289775432|gb|GG745511.1| GENE 282 324106 - 324804 760 232 aa, chain - ## HITS:1 COG:AGpA472 KEGG:ns NR:ns ## COG: AGpA472 COG0684 # Protein_GI_number: 16119556 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 226 1 223 227 154 42.0 2e-37 MTIGNRVFLKRPVGNIALLKEYEHLPAANIADTMNRIAVLGNGIKRISSPQKPIMAGFAI TVKARAGDNLMLHAALDMAGENDVIVVSNEGDRSRALMGEIMVAYAHHMKKIAGIVLDGP IRDIDALSVLDFPLYATGSNPAGPFKMGPGEVNTPIAVGGVAVCPGDLIVGDADGVIVIP LSDAETVLDKAKEYAKFDASKVDAAKNGTANRQWVKKSLDATGVEFIDDTYR >gi|289775432|gb|GG745511.1| GENE 283 324815 - 325768 789 317 aa, chain - ## HITS:1 COG:PAB0514 KEGG:ns NR:ns ## COG: PAB0514 COG0111 # Protein_GI_number: 14520969 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Pyrococcus abyssi # 4 307 5 307 307 212 39.0 9e-55 MTYKILLPQEIMAEGREYLESRGYQLINGSGMEEEDIIRDIGDCDGIIVRLSKMSDRVFE AAKKLKVVARHGAGYDTVDLESAKRHGVVVLNAPIANSMSVAELTIFYMLHCSRNFKLVE EKMLEDYYWAKLRTPKVELDGKTLGLIGVGNIGSRVALKALHGFNMKVIAYDPYKTQQQI PEGVELTDDFDRIFKESDFVSLHCPTTAETTDFVGEKQFSMMKPSAYFINTARGKLVDER ALYHALSQQIIAGAGVDVLKKEPFDANDPIFALSNIVIGPHIGAATIEATDRASLHSAIG IDEVLSGKKPSWPVPGF >gi|289775432|gb|GG745511.1| GENE 284 326105 - 326380 199 91 aa, chain + ## HITS:1 COG:no KEGG:KPK_0256 NR:ns ## KEGG: KPK_0256 # Name: not_defined # Def: transcriptional regulator, LysR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 91 1 91 91 164 100.0 1e-39 MNNAQIEMFSVMVQTGNIHHTAQRFGIDAASITTSICALENEIGFNLIVRGKNIRKVILT EKGKAFYKLTPEILCILNAIATIRCAQNLVE >gi|289775432|gb|GG745511.1| GENE 285 326415 - 327428 1673 337 aa, chain - ## HITS:1 COG:VC1655 KEGG:ns NR:ns ## COG: VC1655 COG2239 # Protein_GI_number: 15641660 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Vibrio cholerae # 19 334 132 447 451 293 51.0 3e-79 MSSIQLCAAHQATSGFDGDAIAQYMRTDFITLQEHLSVHEAREHFISQLDSDDIPGQVFV VAGRKLRGSLSVKKLLQEGDVGQSIRYLMDGCLFRVKPDDERPQVIAELTERGLDLVPVV DKGELVGCLMEKEIAHLLEDDVTEDAQLQGATLPLEKPYLEISPWTLWKKRSVWLLLLFV AEAYTSSVLQHFEEALESAIALAFFIPLLIGTGGNSGTQITSTLVRSMALGEVRLRDMGR VIRKEVSTSFLIALTLGLAGCLRAWMMGIGMEITLIVSLTLVCITLWSAIVSSIIPMVLK RIGIDPAVVSAPFIATLIDGTGLIIYFKIAQYFLGLN >gi|289775432|gb|GG745511.1| GENE 286 327804 - 328100 83 98 aa, chain + ## HITS:1 COG:no KEGG:ROD_43141 NR:ns ## KEGG: ROD_43141 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 8 98 1 91 91 162 86.0 4e-39 MKSWGRAMEQQVLSLRNKQRHTLEQLFKTPVPQGIKWADIESLIKALGGEIKEGRGSRCK FLLNHSIASFHRPHPSPDTDKGAVESVRDWLITIGVRP >gi|289775432|gb|GG745511.1| GENE 287 328097 - 328456 410 119 aa, chain + ## HITS:1 COG:ECs4356 KEGG:ns NR:ns ## COG: ECs4356 COG4226 # Protein_GI_number: 15833610 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Escherichia coli O157:H7 # 1 118 1 118 119 196 82.0 9e-51 MIKPKTPNSMEIAGQPAVINYVPELNAFRGKFLGLSGYCDFVSDSIQGLQQEGEISLQEY LADCHEAGIEPYAHPEKMKTFTLRYPESFGERLSSAAAEEQVSVNTWILETLNERLKQA >gi|289775432|gb|GG745511.1| GENE 288 328484 - 328885 419 133 aa, chain - ## HITS:1 COG:STM3584 KEGG:ns NR:ns ## COG: STM3584 COG0864 # Protein_GI_number: 16766870 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Salmonella typhimurium LT2 # 1 133 1 133 133 164 77.0 3e-41 MQRVTLTLDDDLLAALDALSARRGYHNRSEAVRDILRDALNQDPASPESRRGYAVLSYVY EHEKRELASRLVATQHHHHDLSVATLHVHISHDDCLEIAVLKGDMAEVQHFADEVIAQRG VRHGHLQCLADDN >gi|289775432|gb|GG745511.1| GENE 289 328873 - 329673 410 266 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 254 6 270 329 162 36 2e-38 ENTMNLLSVTGVSHDYPHHGRVLHAIHLAIAPGETVALLGRSGCGKSTLARMLVGLETPQ HGDIAWRGTPLTALKGEAIGAFRRDIQLVFQDAFSAVNPRKTVREIVSEPLRHLLRLSRE ARSRRVEEMLLAVDLAPSLLDKRPAQLSGGQLQRVCLARALAVRPQLLILDEAVSNLDLL LQAEIIALLKRLQAQFDTACLFITHDLRLVERFCQRVLVMEHGRIVETATVSLPLRLHSP AGQALQRAVLPPFPATLLNEAMPCSA >gi|289775432|gb|GG745511.1| GENE 290 329661 - 330425 172 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 228 1 223 305 70 26 8e-11 MPQKIQLEQISLAADRPLVSDVSFTLRRGQVLALLGSSGCGKSLTCAAALGMLPPGVRQT AGRVLLDGIPVHGEQLRGTTIATIMQNPRSAFNPLQTMAAHARETCRAAGRETNDAVLLA AMEEVGLDNPRALLKRYPFEMSGGMLQRMMVALALLSRAPFIIADEPTTDLDAIAQARIL DLLADIVARRGLGLLLVTHDMGVVARLAHHVTVMENGRLVEHCDVNTLFSAPRHPLSQRL LAAHLALYGLEKTP >gi|289775432|gb|GG745511.1| GENE 291 330425 - 331258 1165 277 aa, chain - ## HITS:1 COG:ECs4345 KEGG:ns NR:ns ## COG: ECs4345 COG1173 # Protein_GI_number: 15833599 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 385 81.0 1e-107 MRWLQSFRWPVKLALLVIALLAVIAIGSGWWLPWDPAAIDLQQRLLPPGAAHWLGTDHLG RDIFSRLLAATRVSLGAVMACLLLVLLIGLAVGGSAGLLGGRADRGLMRLAELFMTFPTS ILSFFMVGVLGTGLTNVILAIALSHWAWYARMVRNLVVSLRQREFILAARLSGASQWRLF SDHLAGAVIPSLLVLASLDIGHMMLHVAGMSFLGLGVSAPTAEWGVMINDARQYIWTQPL QMVWPGLALFISVMAFNLLGDALRDRLDPHLIAEHSH >gi|289775432|gb|GG745511.1| GENE 292 331255 - 332199 1289 314 aa, chain - ## HITS:1 COG:ECs4344 KEGG:ns NR:ns ## COG: ECs4344 COG0601 # Protein_GI_number: 15833598 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 484 83.0 1e-137 MLRYILRRLLLLIPLLLAASAIIFLLLRLGTGDPALDYLRLSNLPPTEEMVASTRELLGL NQPLAMQYLHWLWRALHLDFGLSYATQRPVLDDLLHFLPATLLLTGAALALILVTSLPLG IWAARHRDRLPDYVVRLIAFLGVSMPNFWLAFLLVMLFSVHLQWLPAMGYGDWQHLILPA VSIAFMSLAINARLLRASMLDAASQRHVIWARLRGLSARQVERRHILRNATLPVVTALGM HIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVTVFVLANLAVDVLNA ALDPRLRRHEEVSA >gi|289775432|gb|GG745511.1| GENE 293 332199 - 333767 1716 522 aa, chain - ## HITS:1 COG:ECs4343 KEGG:ns NR:ns ## COG: ECs4343 COG0747 # Protein_GI_number: 15833597 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 522 2 524 524 779 73.0 0 MSTIRLTLLALVACVPLLAQAAPHQLTTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLVKY QADGSVQPWLATRWRHAADGKTWWFTLRDDVTFSNGEPFNAQAAAANFQAVLANRQRHAW LELANQITDVRALSATELQITLKSAYAPLLQELALPRPFRFIAPSQFIDGGTARGIKAPI GTGPWRLASSQLNQRDVLVRNERYWGRKPALQQITIKVIPDATSRAVAFETGEIDMLYGD EGLLPLDTFERFRHHPGYVARLSAPVETVMLALNASQGPTREQAVREALNYAVDKQTLVD SVLYGTQQVADTLFAPSVPYAPQDLTPRRYDPAKARALLEQAGWQQPDGQPWRQKAGQPL AIELAFIGTDALAKSMAEIIQANLRQVGVQVTLVGEEESSIYARQREGRFGMIFNRTWGA PYDPHAFLSSMRVPSHADYQAQRGLPDKALIDKEISEVLTTGDEALRRKRYHDVLTRLHQ DAVYLPISYVSLMSVAHQEVGEIPFAPVTTEIPFDQINPVTP >gi|289775432|gb|GG745511.1| GENE 294 333907 - 334767 1095 286 aa, chain - ## HITS:1 COG:PA3225 KEGG:ns NR:ns ## COG: PA3225 COG0583 # Protein_GI_number: 15598421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 283 5 292 309 131 35.0 1e-30 MHKTTLEQWALLEKVVELGSFARAAEETNRSQSSVSYNLALLQERLGVALLAPSGRRAVL TPAGELLLNQVKPLLQAFAYVETHAATLRNGARTRLDLVVDSIFPRQRLFAILRQFQQRY PQTQVRLTEVLENVDDESAARTEADVMVLTRRQDITGRGEWLMNIDFIAVAHRDHPLATL DGPLEDSTLAPWPLVRIADQTGDGQATRDAWTFSTIDAAIDAVMYQVGFGWLPEERIRPH LDQGVLKRLPLSHGARRATPLHLIVKRDLAPIDEQVATLLGLFRAP >gi|289775432|gb|GG745511.1| GENE 295 334868 - 335371 702 167 aa, chain + ## HITS:1 COG:VC2240 KEGG:ns NR:ns ## COG: VC2240 COG3479 # Protein_GI_number: 15642238 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phenolic acid decarboxylase # Organism: Vibrio cholerae # 4 164 3 163 174 244 63.0 4e-65 MSTFDKHDLSGFIGKHLVYTYDNGWNYEIYVKNGHTLDYRIHSGIVGNRWVKDQEAYIVR VGESIYKISWTEPTGTDVSLIVNLGDKLFHGTIFFPRWIMNNPEKTVCFQNDHIPLMNSY RDAGPAYPTEVIDEFATITFIRDCGADNDEVINCPASELPADFPANL >gi|289775432|gb|GG745511.1| GENE 296 335768 - 336907 1177 379 aa, chain + ## HITS:1 COG:yfbE KEGG:ns NR:ns ## COG: yfbE COG0399 # Protein_GI_number: 16130188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 379 12 390 390 612 79.0 1e-175 MSDFLPFSRPSMGDAELAVLREVLASGWITTGPKNQALEAAFCQLTGNRHAIAVSSATGG MHVTLMALGIGPGDEVITPSQTWVSTLNMICLLGATPVMIDVDNDNLMITPDAVEAAITS RTKAIIPVHYAGAPADIDAIRAVGERHGIPVIEDAAHAAGTHYKGRHIGWQGTAIFSFHA IKNMTCAEGGLIVTDDDELASRIRSLKFHGLGVDAYDRQTHGRAPQAEVITPGFKYNLAD INAALALVQLEKLSHANQRRTEIAQRYLRELADTPFKPLTVPAWDHQHAWHLFIIRVDEA ACGISRDALMEKLKAMGIGTGLHFRAAHTQKYYRERFPEVSLPNTEWNSARICSLPLFPD MTDDDVTRVISALRQLSGR >gi|289775432|gb|GG745511.1| GENE 297 336909 - 337892 1218 327 aa, chain + ## HITS:1 COG:yfbF KEGG:ns NR:ns ## COG: yfbF COG0463 # Protein_GI_number: 16130189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 325 1 322 322 568 83.0 1e-162 MLTYPPVKKVSVVIPVYNEQDSLPELLRRTDTACATLGRQYEILLIDDGSSDDSARMLTE AAEAEGSHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVEKADEG YDVVGTVRQNRQDSIFRKSASKMINRLIQRTTGKAMGDYGCMLRAYRRHIIDAMLNCHER STFIPILANTFARRAVEIPVMHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSIFG SVIALLGFAFGLLLVVLRLAFGPQWAAEGVFMLFAVLFMFIGAQFIGMGLLGEYIGRIYN DVRARPRYFIQRVVRQPETASKEEDRS >gi|289775432|gb|GG745511.1| GENE 298 337889 - 339874 2725 661 aa, chain + ## HITS:1 COG:yfbG_2 KEGG:ns NR:ns ## COG: yfbG_2 COG0451 # Protein_GI_number: 16130190 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 306 657 1 352 355 654 85.0 0 MKAVVFAYHDMGCTGIQSLLDAGYDIAAIFTHPDNPGENHFFGSVARLAAEQGIPVWAPE DVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAPLNWV LVNGESETGVTLHRMVNRADAGDIVAQQTVAIGPDDAALTLHRKLCAAATELLGQALPAI LEGKTAERPQDHSQATYVGRRTPEDGRLDWEQPAQTLHNLVRAVSDPWPGAFGYAGANKF IVWKSRVRHDLPAAKPGTVISVAPLIVACQDGALEIVTGQTERGVYMQGAQLAQALGLVS GAVISSKPVVAIKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLESP RFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDC VKYNKRIIFPSTSEVYGMCTDKNFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDK YDLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDI SDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGF REVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRTVELVDDKN P >gi|289775432|gb|GG745511.1| GENE 299 339871 - 340773 822 300 aa, chain + ## HITS:1 COG:yfbH KEGG:ns NR:ns ## COG: yfbH COG0726 # Protein_GI_number: 16130191 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 298 1 295 296 408 67.0 1e-114 MKQVGLRIDVDTFRGTRDGVPRLLDLLGQHGIQASFFFSVGPDNMGRHLWRLVKPKFLWK MLRSRAASLYGWDILLAGTAWPGRRIGAGNEAVIRAAAESHEVGLHAWDHYSWQAWSGVW PQERLALEVERGLLELERIIGRPVTCSAVAGWRADQRVVKAKESFDFLYNSDCRGTRPFL PQLGSGTFGTVQIPVTLPTWDEAVGTAVDIAGFNRYLLDCIHRDPGVPVYTIHAEVEGIA YADQFNELLTMAAEEEIQFCPLSQLLPADFSELPSGKVVRGELAGREGWLGREQLLTSGV >gi|289775432|gb|GG745511.1| GENE 300 340773 - 342428 2587 551 aa, chain + ## HITS:1 COG:ECs3145 KEGG:ns NR:ns ## COG: ECs3145 COG1807 # Protein_GI_number: 15832399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Escherichia coli O157:H7 # 1 551 1 550 550 694 64.0 0 MKSIRYGVSLIALFALYYLLPLNFRLLWQPDETRYAEISREMLATGDWVVPHFLGLRYFE KPIAGYWINSIGQWLFGHNNFGVRFGSVFAITMTALLVAWLAWRVFRDKKVAVLSPVIFL TAMLVYAIGTYAVLDPMITLWLALAMCSFWGAAQAQSRSGKILGYALLGVACGMGVMTKG FLALAVPVVGVLPWVIARKRWREVLTYGWLAVIVCTLVVLPWGLAIAQREPDFWRYFFWV EHIQRFAEKDAQHKAPFWYYIPFLIAGSLPWLALLPGALKRGWLERDEARGALYLLGWVA MPFLFFSIAKGKLPTYILPCFAPLSILMARYALEAAKTGAKALRINGMINLGVGLLGLIA VLVVSPWGVMHKPVWTKIELYKCLLAAIAFAVWALMGWLAMKNPGRRWSLAALCPLGLAL LVGFAIPDRVIDSKQPQFLVDIVSESLQPSRYVLTNNVGIAGGLAWELKRSDIIMFDKQG ELKYGLDWPDAQGSFVSQAGFADWLATHRQQGPVSLVLLMDKGESMVDLPLPKPDNAYEL GRVVFLQYLPQ >gi|289775432|gb|GG745511.1| GENE 301 342425 - 342763 430 112 aa, chain + ## HITS:1 COG:STM2302 KEGG:ns NR:ns ## COG: STM2302 COG0697 # Protein_GI_number: 16765629 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 3 99 2 98 111 114 68.0 3e-26 MSVWICLVFASLLSCAGQLCQKQATRPSRRGRRSRHILFWLGMALLCLGCGMLLWLSVLQ SIPVSIAYPMLSLNFVWVTLAGWGIWHEPVARRHWLGVGLIVVGIVILGTSV >gi|289775432|gb|GG745511.1| GENE 302 342763 - 343143 498 126 aa, chain + ## HITS:1 COG:yfbJ KEGG:ns NR:ns ## COG: yfbJ COG0697 # Protein_GI_number: 16130193 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 126 95 220 222 96 51.0 1e-20 MGFLWALFSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLS MVCWYFALHRLPLSKAYALLSLSYILVWAAAIWLPGWHEPFYWQSLLGVTIIVAGVLTIF WPVKRR >gi|289775432|gb|GG745511.1| GENE 303 343140 - 344189 1546 349 aa, chain - ## HITS:1 COG:yhhT KEGG:ns NR:ns ## COG: yhhT COG0628 # Protein_GI_number: 16131346 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 349 28 376 376 501 81.0 1e-142 MSSPQADKAGLHILLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRRGVR RPFAITLVVTAMLVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFLNLHIN PERMLRRMDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLRFALNNPR LHIAGLHRALKGVTHYLALKTLISLWTGLIVWLGLLAMGVQFALMWGVLAFLLNYVPNIG SAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMSTLVVFLSLL VWGWLLGPVGMLLSVPLTSVCKIWMETTVGGSKLAILLGPGRPKSRLPG >gi|289775432|gb|GG745511.1| GENE 304 344323 - 345543 1588 406 aa, chain + ## HITS:1 COG:yhhS KEGG:ns NR:ns ## COG: yhhS COG0477 # Protein_GI_number: 16131345 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 401 15 415 419 577 86.0 1e-164 MPEPVAEPALNGLRLNLRIVSVVIFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVIS LQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLSYLLAAWSSGWPLVSLLLLCLG RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYSHIGLS GLAVVIMAVALVAILCALPRAAVKATKGKAMSFRAVLGRVWPYGMALALASAGFGVIATF ITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRLGGLNVAMLCFSVEIIGLLLVGF ADTPLLAKIGTFLTGAGFSLVFPALGVVAVKAVPQHNQGSALATYTVFMDLSLGVTGPLA GLLMAWTGISMIYLAAAGLVMAALLLGWRLKKRPPVSEPEAIAPGQ >gi|289775432|gb|GG745511.1| GENE 305 345544 - 346101 834 185 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0263 NR:ns ## KEGG: Kvar_0263 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 185 1 185 185 305 100.0 5e-82 MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMAD QSGKLGTQANNMHVYSDATGQKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNK SLEMKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQVTLPADNQQQAQTEAESIIN TLTIQ >gi|289775432|gb|GG745511.1| GENE 306 346175 - 346840 1003 221 aa, chain - ## HITS:1 COG:ECs4320 KEGG:ns NR:ns ## COG: ECs4320 COG1738 # Protein_GI_number: 15833574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 334 87.0 9e-92 MNPFTTVQRKKALVWLSLFHLLVITSSNYLVQLPISIFGFHTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFAVMVPALVISYGISALFYMGEWQGFAALGTFNLFVARIAIASFMAYA LGQILDVHVFNRLRQSRHWWLAPTASTLFGNISDTVAFFFIAFWRSPDPFMAAHWGEIAL VDYSFKVLISIIFFLPMYGVLLNMLLKRLADKSDLSALQPS >gi|289775432|gb|GG745511.1| GENE 307 347047 - 347292 352 81 aa, chain + ## HITS:1 COG:STM3578 KEGG:ns NR:ns ## COG: STM3578 COG0425 # Protein_GI_number: 16766864 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Salmonella typhimurium LT2 # 1 81 1 81 81 140 86.0 8e-34 MSELFSTPDHTLDALGLRCPEPVMMVRKTVRTMPVGETLLIIADDPATTRDIPGFCRFME HELVAQETEALPYRYLIRKSH >gi|289775432|gb|GG745511.1| GENE 308 347680 - 349719 2502 679 aa, chain - ## HITS:1 COG:STM3576 KEGG:ns NR:ns ## COG: STM3576 COG2217 # Protein_GI_number: 16766862 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 677 57 731 732 915 79.0 0 MDCAACARKVETAVRQVPGVSQVQVLFATEKLLVNAEGDIRAQVENAVRQAGYTLRDADA PAAEKTRGSLLRDNLPLLTLVIMMALSWGLEQANHPAGQLAFIATTLVGLWPVARQALRL IKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMAL KPDTAIRLRNGVRETVAQRDLRPGDVIEVAAGGRLPADGQLLSPFASFDESALTGESVPV ERQAGERVAAGATSVDRLVQLTVISEPGDSAIDRILKLIEEAEERRAPIERFIDRFSRIY TPAIMVVALLVAIVPPLFFASAWLPWIYKGLTLLLIGCPCALVISTPAAITSGLAVAARR GALIKGGAALEQLGQVRQVAFDKTGTLTVGQPQVTSVIATAEVDDNALLALAAAVEQGSS HPLAQAIVREAQRRQLSIPLASGQRALAGSGIEAEVNGSRILICAASKAAPAEHEAQIQQ LESAGQTVVLVMRGETLLGILALRDTLRDDARQAVDALHQLGVQGVILTGDNPRAAAAIA SELGLEFRAGLLPADKVKAVMALNADAPLAMVGDGINDAPAMKAATIGIAMGSGTDVALE TADAALTHNRLTGLAQMISLARATHANIRQNIAIALGLKGIFLVTTLLGLTGLWLAVLAD TGATVLVTANALRLLRKKL >gi|289775432|gb|GG745511.1| GENE 309 349969 - 350595 983 208 aa, chain - ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 273 84.0 2e-73 MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLC ASLLGDALTLLPRQRVMYAVGAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAV IWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTALSGFAGAALLLLSNAVWLVSHY RRRFRADNAIAAAFYFAGHFLIVRALYL >gi|289775432|gb|GG745511.1| GENE 310 350737 - 351096 291 119 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0268 NR:ns ## KEGG: Kvar_0268 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 119 1 119 119 199 100.0 4e-50 MSKMPLFFVLVVAVIVVAASFRYVQQRREKQANDAAPLLQKRVIVSNKREKVINDRRSRQ QTVTPAGSEMRYEASFRPENGGLEVVFRLDAPQYHALSVGDRGMLSYKGTAFVAFTPDP >gi|289775432|gb|GG745511.1| GENE 311 351110 - 351385 493 91 aa, chain - ## HITS:1 COG:yhhL KEGG:ns NR:ns ## COG: yhhL COG3776 # Protein_GI_number: 16131338 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 86 1 86 89 110 72.0 8e-25 MLINLGRLLMLCVWAFLLLNLFQPFPKPLNIFVNVALIFMILMHGLQLTLLKATQPKEAP PLSRFEQIRIFIFGVFELVAWQKKLKATLKK >gi|289775432|gb|GG745511.1| GENE 312 351375 - 351971 690 198 aa, chain - ## HITS:1 COG:yhhF KEGG:ns NR:ns ## COG: yhhF COG0742 # Protein_GI_number: 16131337 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Escherichia coli K12 # 1 198 1 198 198 342 82.0 3e-94 MKKPNHAGSGQIRIIGGQWRGRKLPVPESPGLRPTTDRVRETLFNWLAPSIVDAHCLDCF AGSGALGLEALSRYAASTTLLEMERGVAQQLQKNLATLKADRGKVITTNTLSFLSQPGTP HQIVFVDPPFRQGLLEETLRLLETQGWLADEALVYVESEVENGLPPVPANWQLYREKVAG QVAYRLYQREAQGEHHAD >gi|289775432|gb|GG745511.1| GENE 313 352155 - 353669 742 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 205 501 21 321 336 290 48 6e-77 MAKEKKRGFFSWLGFGQKEQAQETETEQKVQEQQAVADETPVAQTPAEPSAPKADPEAFA EDVVEVTETVVESEKAHLAEPASVQEKEWVETPALVEDAPVVEPEPAVSEPPAVVEPLAE EVIAEPVVAEAVAEQPVADVIAEPQETEVPEEDAPLSDEELEALALAAEAAEEAAVVVPE PEDEAPVEALAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEE QLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTP FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIA QHTGADSASVIFDAIQAAKARHVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVDAPH EVMLTIDASTGQNAISQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGV GERIEDLRPFNAGDFIEALFARED >gi|289775432|gb|GG745511.1| GENE 314 353672 - 354340 351 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 216 4 220 223 139 36 1e-31 MIRFEQVSKAYLGGRQALQGVTFHLQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIF FSGHEISRLKSREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDEALSEGILRLF EEFNRVGVTVLMATHDLGLISSRPYRVLSLSDGHLHGGIRGE >gi|289775432|gb|GG745511.1| GENE 315 354351 - 355388 1382 345 aa, chain + ## HITS:1 COG:STM3569 KEGG:ns NR:ns ## COG: STM3569 COG2177 # Protein_GI_number: 16766855 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 345 7 351 351 625 87.0 1e-179 MNQIRQFGSKFDRLRNAAGGSGGGRNAPKRPKAAPNPASRKSNVFNEQVRYAWHGALQDL KSTPLATFLTVMVIAISLTLPSVCYMVYKNVSSAASQYYPSPQITVYLEKTLDDDAAARV VGQLQAEQGVDKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAIVVPKLDFQSTEA LNTLRERVSRIQGVDEVRMDDSWFARLSSLTGLVGRVSAMIGVLMVAAVFLVIGNSVRLS IFARRDTINVQKLIGATDGFILRPFLYGGAMLGFSGAFLSLILSEILVMRLSSAVTEVAK VFGTQFELSGLGFDECLLMLIVCSMIGWVAAWLATVQHLRHFTPD >gi|289775432|gb|GG745511.1| GENE 316 355658 - 356512 1393 284 aa, chain + ## HITS:1 COG:STM3568 KEGG:ns NR:ns ## COG: STM3568 COG0568 # Protein_GI_number: 16766854 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 494 97.0 1e-139 MTKEMQTLALAPVGNLESYIRAANTWPMLSADEERELAEKLHYQGDLEAAKKLILSHLRF VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM TFDMSSDDESDSQPMAPVLYLQDKTSNFADGIEDDNWEEQAANKLTDAMQGLDERSQDII RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA >gi|289775432|gb|GG745511.1| GENE 317 356565 - 358088 1308 507 aa, chain - ## HITS:1 COG:YPO2845 KEGG:ns NR:ns ## COG: YPO2845 COG1167 # Protein_GI_number: 16123040 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Yersinia pestis # 22 487 26 492 501 534 57.0 1e-151 MRSLVGDLVLVRLQEERDPLLHKRLYNALRRAILDGSLAPQSRLPPSRDLAGELGVSRNT ILTTYEQLLAEGYVVSRRGSGTFVAQTAPESSLTAKGQQENSSIAAPTAHLSRRGQHLLG QVSASPRQWGAFIPGVPDVNAFPHPLFSKIQARISRRPKPERLSYSCNGGTPELQQALVD YLRVSRGVHCQADQILITEGIHQAIDLVTRMLCDNGDLAWVEEPSYWGIRHVLAMNDVRV EPLTVDANGLCPPETVDDAPRLIFVTPSHQYPLGAVMSLERRQRLLALARQQGSWIVEDD YDSEFRFSGQPIPALQGLVPDAPVVYIGTFSKTLYPGLRLGYVVLPRPLVSDLKHAHAEL YRGGHSLIQMALAEFITAGHYSAHIRRMRLLYSRRRAFLTELIQRHCMPYALSDFSDNAG LHLILNLPAEADDVAIAKEANARHILVRPLSRYYLTAARKKGLLMGFASQPEEQMAPAFS VLLGCLQTHCPQMLLPREDAEKQNAPT >gi|289775432|gb|GG745511.1| GENE 318 358207 - 359472 1566 421 aa, chain + ## HITS:1 COG:goaG KEGG:ns NR:ns ## COG: goaG COG0160 # Protein_GI_number: 16129263 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 419 1 419 421 608 73.0 1e-174 MKSSELNQRRQQATPRGVGVMCNYFVEKAENATLWDIEGNEVIDFAAGIAVLNTGHRHPK VVAAVADQLQAFTHTAYQIVPYESYVSLAERINDLAPIDGPAKTAFFTTGAEAVENAVKI ARAYTGRPGLITFGGGFHGRTFMTMALTGKVAPYKIGFGPFPGSVYHGVYPNEAHGVTTA DALKSLERIFKADIAPDQVAAIILEPIQGEGGFNVAPADFMQALRDLCDTHGILLIADEV QTGFARTGKLFAMQHYEVKPDLMTMAKSLAGGFPLSGVVGRAEVMDAPAPGGLGGTYAGN PLAVAAAHAVLDVIAEEQLCQRAEQLGSHLQEVLNQARATCPAIVDVRGRGSMVAVEFND PQTGEPSPEFTRQVQQKAQENGLLLLSCGVYGNVIRFLYPLTIPDAQFSKALDILARILK S >gi|289775432|gb|GG745511.1| GENE 319 359620 - 360864 1307 414 aa, chain + ## HITS:1 COG:PA3766 KEGG:ns NR:ns ## COG: PA3766 COG0814 # Protein_GI_number: 15598961 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Pseudomonas aeruginosa # 15 414 19 418 418 521 69.0 1e-147 MSENSTFSPVLTGRERTAVPTKSLSFIEGVSMIVGTNIGAGVLSIAYASSKAGFLPLLFW LVLVGSLTTVTMLYVAESTLRTRKHLQLSGLSKRYVGGFGALMMFLSVCVNSVGALTAYM TGSGKLLHSLFGISPALGSVLFFVPAAGVLYLGLKAIGRGEKFISIGMVVMISVLVIATL LKETTRVGYLLDGNWLYMVPVFNVVAFCFSAQYIVPEMARGFADKPEKLPRAIMVGMALT FALLALVPLSVISLNGLDNISDVATISWGRALGEWAFFSANLFALCAMLTSYWGLGGSFL TNIFDQFRLGNDEQPARRLMVLLVVAIPPFVLAYSGMVSFVNALYFAGVFSGVILSIMPI LMLKGARQRGDLTPGWTCPAWMTHPLIQCFIVLLYLCSAVYAIASAVGYLPAGW >gi|289775432|gb|GG745511.1| GENE 320 361122 - 362225 1520 367 aa, chain + ## HITS:1 COG:ECs4309 KEGG:ns NR:ns ## COG: ECs4309 COG0683 # Protein_GI_number: 15833563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli O157:H7 # 1 367 20 386 386 678 95.0 0 MNMKGKALLAGCIALVMSSAALAEDIKIAVVGAMSGPVAQYGDQEFTGAEQAVADINAKG GIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI TPAATAPELTARGYKLILRTTGLDSDQGPTAAKYILDKVKPQRIAVVHDKQQYGEGLARA VQDGLKKGGANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAG LKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFV WTTYAALQSLQAGLNQSDDPAEIAKYLKGATVDTVMGPLSWDQKGDLKGFEFGVFTWHAN GTATDAK >gi|289775432|gb|GG745511.1| GENE 321 362497 - 362880 531 127 aa, chain - ## HITS:1 COG:no KEGG:KPK_0293 NR:ns ## KEGG: KPK_0293 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 127 1 127 127 243 99.0 2e-63 MKLTIIRLQHFSDQDRIDLGKIWPSQDLSILTLDENHRLYAARFNERLLGAVRVTLRGVE AELSDLCVREVTRRRGVGQYLVEETLRDNPAINSWRVADQGVEDRGVMAAFMQALGFSAQ QTGWEKH >gi|289775432|gb|GG745511.1| GENE 322 363304 - 364413 1645 369 aa, chain + ## HITS:1 COG:livK KEGG:ns NR:ns ## COG: livK COG0683 # Protein_GI_number: 16131330 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli K12 # 1 369 1 369 369 648 90.0 0 MKRNAKTIVAGIVALAMSHAAMAKDIKVAVVGAMSGPVAQWGDMEFNGARQAIKDINASG GIKGDKLVAVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMI SPGATNPELTQRGYQYIMRTAGLDSSQGPTAAKYIVEKVKPQRIAIIHDKQQYGEGLARS VQDNLKKAGANIVFFDGITAGEKDFSALLARLKKENIDFVYYGGYYPEMGQMLRQARSVG LKTVFMGPEGVGNASLSNIAGAAAEGMLVTMPKRYDQDPANSAIVNALKAEKKDPSGPYV WITYAAVQSLAQAMDRTGSQQPLDLIKDLKAHGAKTVIGPLTWDEKGDLKGFEFGVFQWH ADGSSSAAK >gi|289775432|gb|GG745511.1| GENE 323 364475 - 365401 1504 308 aa, chain + ## HITS:1 COG:ECs4304 KEGG:ns NR:ns ## COG: ECs4304 COG0559 # Protein_GI_number: 15833558 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 479 97.0 1e-135 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAA LMMMGIDTSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQN YVSLTQGSRDVALPSLFNGQWVVGHSDSFSATITTMQLVIWVVTFIAMLALTLFIRYSRM GRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGIL GRPEVEKV >gi|289775432|gb|GG745511.1| GENE 324 365398 - 366675 1995 425 aa, chain + ## HITS:1 COG:STM3562 KEGG:ns NR:ns ## COG: STM3562 COG4177 # Protein_GI_number: 16766848 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 425 1 425 425 711 96.0 0 MKPMQIAMALLSAVMFFILAGVFMGVQLELDGTKLVVDTAADIRWQWIFIGTAVVFFFQL LRPLFQKAVKNVSGPKFIMPAIDGSTVKQKLFLIALLVIAVAWPFMVSRGTVDIATLTMI YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGF LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTFFGLEFSRTAR EGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA CRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG SQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRVQLKLKNGQA KGEQA >gi|289775432|gb|GG745511.1| GENE 325 366672 - 367439 264 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 245 1 230 245 106 25 2e-21 MSQPLLSVSGLMMRFGGLLAVNNVSLELREREIVSLIGPNGAGKTTVFNCLTGFYKPTGG TIMLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT PAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP AAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE IRNNPDVIRAYLGEA >gi|289775432|gb|GG745511.1| GENE 326 367441 - 368154 268 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 227 1 229 245 107 29 6e-22 MENAMLTFDNVSAHYGKIQALHNVSLHIKQGEIVTLIGANGAGKTTLLGTLCGDPRASSG RIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFADRDQFQTRIKWV YELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTI EQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLANEAVRSAYLGG >gi|289775432|gb|GG745511.1| GENE 327 368326 - 368547 169 73 aa, chain + ## HITS:1 COG:STM3559 KEGG:ns NR:ns ## COG: STM3559 COG2161 # Protein_GI_number: 16766845 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Salmonella typhimurium LT2 # 1 73 3 75 75 116 93.0 1e-26 MRTVNYSEARQNLADVLESAVTGVPVTITRRGHKSAVIISAEEFERYQAARMDDEFAAIM AVHGDEIRELADK >gi|289775432|gb|GG745511.1| GENE 328 368544 - 368912 86 122 aa, chain + ## HITS:1 COG:STM3558 KEGG:ns NR:ns ## COG: STM3558 COG3654 # Protein_GI_number: 16766844 # Func_class: R General function prediction only # Function: Prophage maintenance system killer protein # Organism: Salmonella typhimurium LT2 # 1 122 1 122 122 206 86.0 7e-54 MTLQIISAEEIIQFHDRLLRVTPDVAGMPDPGRAEAIMYRVLNKIEYEGVTDVWRLAAMH LLVISRGHIFNDGNKRTALFITLLFLKRNGIILPANPDFVGMTVEAAAGQLTLEQIVARL RG >gi|289775432|gb|GG745511.1| GENE 329 369204 - 370520 1841 438 aa, chain + ## HITS:1 COG:STM3557 KEGG:ns NR:ns ## COG: STM3557 COG1653 # Protein_GI_number: 16766843 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 827 93.0 0 MISLRHTALGLALSLAFAGQALAVTTIPFWHSMEGELGKEVDSLAQRFNAANPDYKIVPV YKGNYEQSLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYQVFSEAGIKFDESQF VPTVSGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLAAYTAKLK AAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLEEM NKKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRQYAKFNYGVGMMPYDADVKGAP QNAIIGGASLWVMQGKDKETYTGVAKFLDFLTKPEIAAEWHQKTGYLPITTAAYDLTRQQ GFYDKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDS AVQRGNQLLRRFEQATKS >gi|289775432|gb|GG745511.1| GENE 330 370627 - 371514 1359 295 aa, chain + ## HITS:1 COG:STM3556 KEGG:ns NR:ns ## COG: STM3556 COG1175 # Protein_GI_number: 16766842 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 295 1 295 295 471 95.0 1e-133 MSSSRPVFRSRWLPYVLVAPQLIITLIFFIWPAGEALWYSLQSVDPFGLSSQFVGLDNFV ALFHDPYYLDSFWTTIKFSTLVTVSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPA VAAVLWIFLFNPGRGLITHFLGELGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAA LQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAG GPVQATTTLIYKIYREGFAGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ >gi|289775432|gb|GG745511.1| GENE 331 371511 - 372356 1235 281 aa, chain + ## HITS:1 COG:STM3555 KEGG:ns NR:ns ## COG: STM3555 COG0395 # Protein_GI_number: 16766841 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 459 95.0 1e-129 MIENRRGLTIFSHTMLILGIAVILFPLYVAFVAATLDNQSVFETPMTLIPGGHLLENMKT IWVNGVGVNSAPFWLMMLNSFIMAFAITVGKIVVSMLSAFAIVWFRFPLRNLFFWMIFIT LMLPVEVRIFPTVEVIANLNMLDSYAGLTLPLMASATATFLFRQFFMTLPDELIEAARID GASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIIQDVNLGTAVAGIKGMIAT GEGTTQWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK >gi|289775432|gb|GG745511.1| GENE 332 372358 - 373428 1318 356 aa, chain + ## HITS:1 COG:ECs4296 KEGG:ns NR:ns ## COG: ECs4296 COG3839 # Protein_GI_number: 15833550 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 355 14 368 369 622 89.0 1e-178 MAGLKLQAVSKSWDGKTQVIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGD IWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKGLIAERVQEAAR ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQIGTPVEVYEKPASRFVASFIGSPAM NLLEGRVSDDGGRFELAGGMALPMNHEHRRYAGRKMTLGIRPEHFILSSQAQGGIPLLMD TLEILGADNLAHGRWGEQKLVVRLPHQQRPAGGSTLWLHLPLEHLHLFDGETGQRA >gi|289775432|gb|GG745511.1| GENE 333 373425 - 374165 907 246 aa, chain + ## HITS:1 COG:ugpQ KEGG:ns NR:ns ## COG: ugpQ COG0584 # Protein_GI_number: 16131321 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli K12 # 1 244 1 244 247 450 88.0 1e-126 MSNWPYPHIVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGQIFLLHDDNLER TSNGWGVAGELAWDDLLKVDAGSWFSREFKGEPLPLLSQVAERCRRHGMMANIEIKPTTG LGPQTGNVVALAARDLWQGMTAPLLSSFEIDALEAAQEAAPELPRGLLLDEWRDDWRELT TRLGCVSIHLNHKLLDAARVASLKQAGLHILVYTVNKPQRAAELLRWGVDCICTDAIDVI GPNFHP >gi|289775432|gb|GG745511.1| GENE 334 374187 - 374507 541 106 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0292 NR:ns ## KEGG: Kvar_0292 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 106 1 106 106 93 100.0 2e-18 MKAILFLAALMPLGVLAQPININNNPNQPGYVVPSQQRMQNEMKVQQQQQQSMLKQDLNN QTRSQQQHLQNQLQTNQQRAAQGGNLNPPQQVLPNNNGGMLRQTNP >gi|289775432|gb|GG745511.1| GENE 335 374631 - 376376 2272 581 aa, chain + ## HITS:1 COG:STM3551 KEGG:ns NR:ns ## COG: STM3551 COG0405 # Protein_GI_number: 16766837 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Salmonella typhimurium LT2 # 2 581 1 580 580 1010 88.0 0 MIKTTIWRQVVIAALLAGGSFTVAANPPPPPPVSYGVEEDVFHPVRARQGMVASVDALAT RVGVDILRQGGNAVDAAVAVGYALAVTHPQAGNIGGGGFMMLRTKDGKTTAIDFREMAPE QATRDMFLDDQGNPDSKKSLTSHLASGTPGSVAGFSLALEKYGTMPLNKVIRPAIKLAEE GFIVNDALADDLKTYGSEVIPQHENSKAIFWKNGEPLKKGDRLVQKNLGKSLELIAEHGP EAFYKGAIADQIADEMKKHGGLITKADLASYKAVERTPVSGEYRGYEVYSMPPPSSGGIH IVQILNILENFDMQKYGFGSADAMQVMAEAEKHAYADRSEYLGDPDFVKVPWQALTSKAY AKAIAAEIDVNKAKPSSQIRPGKLAPYESNQTTHFSVVDKEGNAVAVTYTLNTTFGTGIV AGDSGILLNNQMDDFSAKPGVPNVYGLVGGDANAVEPKKRPLSSMSPTIVVKDGKTWLVT GSPGGSRIITTVLQMVVNTIDFGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLET KGQKVALKEAMGSTQSIMVGPDGMLYGASDPRSPDDLTAGY >gi|289775432|gb|GG745511.1| GENE 336 376584 - 377072 372 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 162 1 163 179 147 49 5e-34 MSDIVIRHAEPKDIDAIRQIHAQPEVYHNTLQVPHPSEHMWRERLTDTPGVKQLVACIDE QVVGHLSIAVVQRPRRSHVADFGVSVDSRWHNRGVASALMRTMIDMCDNWLRVERIELTV FADNAPAIAVYKKYGFEIEGTGRRYALRNGEYVDAYYMARMK >gi|289775432|gb|GG745511.1| GENE 337 377300 - 377797 439 165 aa, chain - ## HITS:1 COG:YPO4112 KEGG:ns NR:ns ## COG: YPO4112 COG1664 # Protein_GI_number: 16124220 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Integral membrane protein CcmA involved in cell shape determination # Organism: Yersinia pestis # 1 158 50 211 223 101 35.0 7e-22 MFIKKNKTEPQASEAATLPAINPEPEAVASKKHETTIIASGVHFVGNIVASGHVYIHGQL TGNIEAKEHLIKVMREGQVEGNISCRELIIDGKVQGQCHGDSITIEEHGHLDGTLAYRAL AIKKGGVFSGRAEMLAAAENKSHILGLVADTPSKADAEPARPQSA >gi|289775432|gb|GG745511.1| GENE 338 378218 - 379255 1351 345 aa, chain + ## HITS:1 COG:STM3545 KEGG:ns NR:ns ## COG: STM3545 COG0673 # Protein_GI_number: 16766831 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 345 1 345 345 610 85.0 1e-175 MTLHCAFIGFGKSTTRYHLPYVLHRKDRWHVAHIYRRRAKPEEQAPQYSHIHFTSDLDDV LNDPQVNLVVVCTHADSHFEYAKKALEAGKNVLVEKPFTPTLEEAKALFSLANSKGLAVT PYQNRRFDSCFLTTKKVIESGKLGELVEIESHFDNYRPVAETNPGGPQNGEFYGLGVHTL DQIISLFGRPDHVSYDLRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVQIDYPKFIVHG HKGSFVKYGIDQQETSLKANIMPGEPGFGADDSVGELVYVNEAGETVREAVPLETGDYGR VYDALYETLVNGQPNYVKESDVLTNMEILERGFEQPSPATITLAK >gi|289775432|gb|GG745511.1| GENE 339 379377 - 380072 890 231 aa, chain + ## HITS:1 COG:STM3544 KEGG:ns NR:ns ## COG: STM3544 COG1741 # Protein_GI_number: 16766830 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 462 96.0 1e-130 MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIDAGQGFGTHPHK DMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHSEYNPSKTDRLRLYQIWII PEETGITPRYEQRRFDAAQGKQLVLSPDARDGSLKVYQDMELYRWALLKDEQSVHQIAAE RRVWIQVVKGEVTINGTKATTSDGLAIWDEQAISVHADSDSEILLFDLPPV >gi|289775432|gb|GG745511.1| GENE 340 380187 - 381182 1240 331 aa, chain + ## HITS:1 COG:ECs4287 KEGG:ns NR:ns ## COG: ECs4287 COG1609 # Protein_GI_number: 15833541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 625 94.0 1e-179 MKKKRPVLQDVADLVGVTKMTVSRYLRNPEQVSEALRGKIAVALDELGYIPNRAPDILSN ATSRAIGVLLPSLTNQVFSEVLRGIESVTDAFGYQTMLAHYGYKPEMEEKRLESMLSWNI DGLILTERTHTPRTLKMIEVAGIPVVELMDSRSPCLDIAVGFDNFEAARQMTAAIIARGH RHVAYLGARLDERTIIKQKGYEQAMLDAGMTPYSVMVEQSSSYSSGIELMRQARREYPQL DGIFCTNDDLAVGAAFECQRLGLKIPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGRI GAERLLARIRGEAITPKMLDLGFTLSPGGSI >gi|289775432|gb|GG745511.1| GENE 341 381402 - 381893 596 163 aa, chain + ## HITS:1 COG:STM3542 KEGG:ns NR:ns ## COG: STM3542 COG3265 # Protein_GI_number: 16766828 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Salmonella typhimurium LT2 # 1 162 14 175 177 308 92.0 3e-84 MGVSGSGKSVVASEVAHQLHAAFLDGDFLHPRSNITKMASGEPLNDDDRTPWLQALNDAA FAMQRTNKVSLIVCSALKKSYRDILRKGNPNLSFIYLKGDFDVIENRLKARKGHFFKTQM LVTQFETLQEPGADESDVLIVDIDQPLEGVVASTIEVINKGSH >gi|289775432|gb|GG745511.1| GENE 342 381956 - 383233 1863 425 aa, chain + ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 425 22 446 446 670 97.0 0 MKARMHAFVALMVVSIGAGLFSGMPLDKIAATMEKGMGGTLGFLAIVVALGAMFGKILHE TGAVDQIAVKMLKSFGHNRAHYAIGLAGLICALPLFFEVAIVLLISVAFSMARHTGTNLV KLVIPLFAGVAAAAAFLLPGPAPMLLASQMHADFGWMILIGLCAAIPGMIIAGPLWGNFI SRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPVGSTAYEWFE FIGHPFTAILVACLVAIYGLAMRQGMAKDRVMEICGHALQPAGIILLVIGAGGVFKQVLV DSGVGPALGEALTGLGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGA QMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAQTLKTWTMMETILGTTGAIVGMIA FQLLS >gi|289775432|gb|GG745511.1| GENE 343 383410 - 383592 68 60 aa, chain - ## HITS:1 COG:no KEGG:KPK_0314 NR:ns ## KEGG: KPK_0314 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 60 1 60 60 113 98.0 3e-24 MIAEQSEKQLILHIVHRRWSSSKTQRLSGKSPAQWNIFRRYFIDPDYGLSAKSGDLPLAK >gi|289775432|gb|GG745511.1| GENE 344 383696 - 384802 1510 368 aa, chain + ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 368 1 367 367 709 95.0 0 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQPAPSFGGSTGGTLQDAFD LDALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVI TAGLNNGIKTFVGGNCTVSLMLMSLGGLFAQDLVEWVSVATYQAASGGGARHMRELLSQM GQLHNHVAAELANPASAILDIERKVTSLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQS REEWKGQAETNKILATSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHN PWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEYLSAFTVGDQLLWGAAEPL RRMLRQLA >gi|289775432|gb|GG745511.1| GENE 345 385041 - 387227 2912 728 aa, chain + ## HITS:1 COG:STM3538 KEGG:ns NR:ns ## COG: STM3538 COG0296 # Protein_GI_number: 16766824 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Salmonella typhimurium LT2 # 1 728 1 728 728 1386 90.0 0 MSNHIDRDVINALIAGHFADPFSVLGMHRTDAGLEVRALLPDATDVWVIEPKTGRKVGKL ECLDSRGFFSGVLPRRKNAFRYQLAVTWHGQQNLIDDPYRFGPLLQDLDVWLLSEGTHLR PYETLGAHAATMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRFRKESGIWELFVP GAHNGQLYKFELIDAHGHLRVKADPYAFESQMRPESASLICDLPPKVEQPADRKAANQFD APISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPVNEHPFDGSWGY QPTGLYAPTRRFGTRDDFRYFINAAHAAGLNVILDWVPGHFPADDFALASFDGTSLYEHS DPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKAG EWIPNEYGGRENLEAIEFLRSTNRILGEQTPGAVTMAEESTDFAGVTRPPAGGGLGFWFK WNLGWMHDTLDYMKLDPVHRRYHHDKMTFGMLYNYTENFVLPLSHDEVVHGKKSILDRMP GDAWQKFANLRAYYGWLFAFPGKKLLFMGNEFAQGREWNHDGSLDWHLLEGGDNWHHGVQ RLVRDLNHTYRHHKALHELDFDPYGFEWLVVDDHERSVFVFVRRDRAGNEIIVASNFTPV PRHDYRFGINQPGRWREALNTDSMHYHGSNQGNGGVVESDAIASHGREHSLSLTLPPLAT IWLVREAQ >gi|289775432|gb|GG745511.1| GENE 346 387224 - 389200 1568 658 aa, chain + ## HITS:1 COG:STM3537 KEGG:ns NR:ns ## COG: STM3537 COG1523 # Protein_GI_number: 16766823 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Salmonella typhimurium LT2 # 1 657 1 657 658 1084 78.0 0 MTSLAAGKPAPLGASYDGKGVNFALFSAHAERVELCVFDEQGNEQRVDLPARSGDIWHGW LDAAGPGLRYGYRVHGPWDPAQGHRFNPAKLLLDPCAYRVEGDLPDDERLHGGMWEPDHR DSAAIAPKSQVVDLHYDWRGDKPPRTPWGETVIYEAHVKGLTLLHPQLPEAIRGTYKALC HPVMIAYFKSLGISALELLPVAQFASEPRLQRMGLSNYWGYNPLAWSALDPRYASEPARA LDEFRDAVKALHAAGIEVILDIVLNHSAEIDLEGPTVSLRGIDNRSYYWVREDGDYHNWT GCGNTLNLSHPGVVEWARQCLRFWVDECHVDGFRFDLTSVMGRTPEFRQDAPLFEAIRRD SVLSQVKLIAEPWDIGPGGYQVANFPPLFAEWNDHFRDISRRFWLQQNVSLGDFAQRFAA SSDLFARDGKRPSATVNLVTAHDGFTLRDCVCFNQKHNEANGEENRDGTNNNYSNNHGIE GLDANLAVIERRRASVHALLTTLLLAQGTPMLLAGDEQGHSQHGNNNAYCQDNALTWLDW RQANPGLTAFTAALIHLRRRIPALTRNRWWQEGDGNVRWLNRNAQPLTAGEWQQGAACMQ IQLSDRWLLTLNATAEVVDMVLPEGEWRAVPPFAGEDNPVIMAVWHGPAHGVCVFQRS >gi|289775432|gb|GG745511.1| GENE 347 389281 - 390576 1433 431 aa, chain + ## HITS:1 COG:ECs4275 KEGG:ns NR:ns ## COG: ECs4275 COG0448 # Protein_GI_number: 15833529 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 431 1 431 431 865 93.0 0 MVRLEKNDPLMLARQLPIKSVALILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSN CINSGIRRIGVITQYQSHTLVQHIQRGWSFFSEEMNEFVDLLPAQQRVHGENWYRGTADA VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGV MAVDENEKIIEFVEKPANPPAMPTDPTKSLASMGIYIFDAAYLYELLEEDDRNENSSHDF GKDIIPKITEAGMAYAHPFPLSCVQSDPNAEPYWRDVGTLEAYWKANLDLASVTPELDMY DQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRVNSFC NIDSAVLLPDVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRD MLRKLGHKQER >gi|289775432|gb|GG745511.1| GENE 348 390576 - 392009 1915 477 aa, chain + ## HITS:1 COG:ECs4274 KEGG:ns NR:ns ## COG: ECs4274 COG0297 # Protein_GI_number: 15833528 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Escherichia coli O157:H7 # 1 476 1 476 477 901 91.0 0 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIAEGIDTRVLLPAFPDIRRGVVDAQVVTRR DTFAGRITLLYGHFNGVGIYLIDAPHLYDRPGSPYHDTNQHAYTDNVLRFALLGWVGSEM ASGLDPFWRPDVVHAHDWHAGLTPAYLAARGRPAKSVFTVHNLAYQGMFYSWHMNDIELP WSFYNMHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQYAYGMEGLLRQRHHEGR LSGILNGVDDGIWSPQNDLLLPMRYDRDTLEEKAENKRQLQIAMGLKVDDKAPLFAVVSR LTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGKVGVQIGYHEAFS HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGLATG FVFEDSNALSLLRAIRRAFVLWSRPSLWRYVQRQAMNMDFSWQVAANSYRELYQRLM >gi|289775432|gb|GG745511.1| GENE 349 392027 - 394474 3614 815 aa, chain + ## HITS:1 COG:STM3534 KEGG:ns NR:ns ## COG: STM3534 COG0058 # Protein_GI_number: 16766820 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Salmonella typhimurium LT2 # 1 815 1 815 815 1529 91.0 0 MNVPFSYASPTLSVEALKHSIAYKLMFIIGKDPAIANKHEWLNATLFAVRDRMVERWLRS NRAQLSQEVRQVYYLSMEFLIGRTLSNALLSLGIYDDVSSALAEMGLDLEELIDEENDPG LGNGGLGRLAACFLDSLAALGLPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE FERHNTRYKVRFGGRIQQEGKKTRWIETEEIIAEAYDQIIPGFDTDATNTLRLWSAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSR HYMLHKTFDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDEAFEVTCQVFSYTNHT LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTALLSRTSIIDESNGRR VRMAWLAVVVSHKVNGVSELHSRLMVESLFAEFAKIFPMRFTNVTNGVTPRRWLALANPP LSKVLDEHIGRTWRTDLSQLDELKQHIDYPTVNQAVRQAKLENKQRLASYIAQQLNVVVN PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPQAEWVPRVNIFAGKAASAYYMAKH IIHLINDVAAVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN MKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEELRRSGYKPREYYEQDEEL HQALTQIGTGVFSPAEPGRYRDLLDSLINFGDHYQVLADYRSYVDCQDRVDELYQHPEEW AYKAMLNIANMGYFSSDRTIQEYAKYIWHIDPVRL >gi|289775432|gb|GG745511.1| GENE 350 394689 - 395036 227 115 aa, chain + ## HITS:1 COG:YPPCP1.09c KEGG:ns NR:ns ## COG: YPPCP1.09c COG4683 # Protein_GI_number: 16082688 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 111 1 109 115 122 54.0 1e-28 MWDVETTDTFDAWFELQSRALKEDMLATMLILSEFGPQLGRPYVDTVKDSTFQNMKELRV QHHGLPIRAFFAFDPLRKAIVLCAGNKDGMNEKRFYKEMITLADREFSQHLTKER >gi|289775432|gb|GG745511.1| GENE 351 395036 - 395335 83 99 aa, chain + ## HITS:1 COG:YPPCP1.08c KEGG:ns NR:ns ## COG: YPPCP1.08c COG1396 # Protein_GI_number: 16082687 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 99 1 99 99 91 52.0 4e-19 MATLKELMAKQSPESQQRIAAKAAEIRQSVALNLLREELQMSQTEMAAAMGVKQPTIAKM EQADNDPRLSTLKRYIAALGGELSINVTLPTGKKVSFNL >gi|289775432|gb|GG745511.1| GENE 352 395398 - 396906 1969 502 aa, chain - ## HITS:1 COG:glpD KEGG:ns NR:ns ## COG: glpD COG0578 # Protein_GI_number: 16131300 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 502 1 501 501 895 89.0 0 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEARDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS TGLRFGAESVLKPEIVRGFEYSDCWVDDARLVLANAQMVVRKGGEVRTRTRAISAKRENG LWVVEAEDIDSGEKFTWKARGLVNATGPWVKQFFDEGMHLRSPYGIRLIKGSHIVVPRVH TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVAIDDKEINYLLNVYNAHF KKTLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGQAPLLSVFGGKLTTYRK LAEHALEKLTPYYKGIGPAWTKTAVLPGGDIGGDRDDYAAKLRRRFPFISESLARHYART YGSNSEWILKEASALSDLGEDFGHEFYEAELKYLVEHEWVRSLDDAIWRRTKQGMWLNAE QQARISEWLAQHAGKSELSLAS >gi|289775432|gb|GG745511.1| GENE 353 397111 - 397440 559 109 aa, chain + ## HITS:1 COG:STM3525 KEGG:ns NR:ns ## COG: STM3525 COG0607 # Protein_GI_number: 16766812 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Salmonella typhimurium LT2 # 1 107 1 107 108 185 85.0 2e-47 MEQFECINVEEAHQKLHQQTAVLVDIRDPQSYAMGHTPGAFHLTNDTLGAFMRDHDFDTA VMVMCYHGNSSKGAAQYLLQQGFDKVYSVDGGFDAWHRHFPAEVAHGTF >gi|289775432|gb|GG745511.1| GENE 354 397491 - 398321 844 276 aa, chain + ## HITS:1 COG:STM3524 KEGG:ns NR:ns ## COG: STM3524 COG0705 # Protein_GI_number: 16766811 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Salmonella typhimurium LT2 # 1 275 1 275 276 449 82.0 1e-126 MLMITSFANPRVAQAFVDYMATQGIILTIQQHAQSDVWLADESQAGRVRAELARFLENPA DPRYLAASWQSGQTNSGLRYQRFPFFATLRHNAGPFTWAILLICIAVFILQNLLGDQPVM IWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNLLWWWYLGGAVEKRIGSGKLVVITVI SALLSGFVQHQFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLILFSLVWLIAG WFDVFGMAIANGAHVAGLATGLAMAFVDTLHGRKRA >gi|289775432|gb|GG745511.1| GENE 355 398371 - 399129 1044 252 aa, chain + ## HITS:1 COG:STM3523 KEGG:ns NR:ns ## COG: STM3523 COG1349 # Protein_GI_number: 16766810 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 252 1 252 252 451 89.0 1e-127 MKQTQRHDAIIELVKKQGYVSTEELVEQFAVSPQTIRRDLNDLAEQKMILRHHGGAALPS SSVNTSWHDRKATQTAEKERIARRVASEIPDGATLFIDIGTTPEAVAHALLDHHDLRIVT NNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGVDSDGS LLEFDYHEVRTKRAIIENSRHVMLVVDHTKFGRNAMVNMGSISMVDAVYTDVLPPAGVLK VITDNNLQLELC >gi|289775432|gb|GG745511.1| GENE 356 399145 - 401850 3235 901 aa, chain - ## HITS:1 COG:STM3515 KEGG:ns NR:ns ## COG: STM3515 COG2909 # Protein_GI_number: 16766803 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 901 1 901 901 1492 88.0 0 MLIPSKLSRPVRLEHTVVRERLLAKLSGANNYRLVLITSPAGYGKTTLISQWAAGKNDLG WFSLDEGDNQQERFASYLIAAIQQATGNHCAASEAMVQKRQYASLSSLFAQLFIELADWQ RPLYLVIDDYHLINNPVIHDAMRFFLRHQPENMTLVVLSRNLPQLGIANLRVRDQLLEIG SQQLAFTHQEAKQFFDCRLTSPIEADDSSRLCDDVAGWATALQLIALSARQNNSSAQHSA RRLAGINASHLSDYLVDEVLDNVDARTRNFLLKSSLLRSMNDALIVRVTGEENGQMQLEE IERQGLFLQRMDDSGEWFRYHPLFGSFLRQRCQWELAVELPEIHRAAAESWMAQGFPSEA IHHALAAGDAKMLRDILLNHAWGMFNHSELGLLEQSLSALPWSNLLENPRLILLQAWLMQ SQHRYSEVNTLLARAEQEMSVEMDTAMHGDFNALRAQVAINDGDQDEAERLSMVALEELP LANYYSRIVATSVHGEVLHCKGKLTKSLAVMQQTEQMARRHDVWHYALWSIIQQSEILFA QGFLQAAWESQEKAFQLVREQHLEQLPMHEFLLRIRSQLLWAWARLDEAEACARQGMDVL STYQPQQQLQCLALMVQCSLARGDLDNARSHLNRLENLLGNGHYHSDWVSNADKVRVIYW QMTGDKTAAANWLRQTPKPEFANNHFLQSQWRNIARAQILLGDFEPAEMVLEELNENARS LRLMSDLNRNLLLLNQLYWQAGRKSEAQKALLEALTLANRTGFINHFVIEGEAMAQQLRQ LIQLNTLPELEQHRAQRILRDINQHHRHKFAHFDEGFVERLLNHPEVPELIRTSPLTQRE WQVLGLIYSGYSNEQIAGELDVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG V >gi|289775432|gb|GG745511.1| GENE 357 402475 - 404865 3467 796 aa, chain + ## HITS:1 COG:STM3514 KEGG:ns NR:ns ## COG: STM3514 COG0058 # Protein_GI_number: 16766802 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Salmonella typhimurium LT2 # 1 796 1 797 797 1493 90.0 0 MSQTSFNKAQFQAALTRQWQHFGLQSASEMTQRQWWRAVSGALAELLAAQPVAKPAQGQR HVNYISMEFLIGRLTGNNLLNLGWYEGVSDALKGYDVNLTDLLEEETDPALGNGGLGRLA ACFLDSMATVGQSATGYGLNYQYGLFRQSFDDGQQMEAPDDWGRNSYPWFRHNEALDVQV GIGGKVSKNGEWQPAFVITGEAWDLPVLGYRNNVAQPLRLWQAKHAHPFNLTKFNDGDFL RAEQQGIDAEKLTKVLYPNDNHQAGKKLRLMQQYFQCACSVADILRRHHLAGRKLAELAD YEVIQLNDTHPTIAIPELLRVLIDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKL VKALLPRHMQIIKEINDRFKQLVDKTWPGDKQVWAKLAVVHDKQVRMANMCVVGGFAVNG VAALHSDLVVKDLFPEYNQLWPNKFHNVTNGITPRRWIKQCNPALASLLDETLKKEWAND LDQLINLEKYADDAAFRQTYRDIKQANKVHLAEFVKQRTGIEINPQAIFDIQIKRLHEYK RQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAETINNDP KVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG ANVEIAEQVGEENIFIFGHTVEEVKALKAKGYDPLKWRKKDKLLDAVLKELENGTYSNGD KHAFDQMLHSLLQGGDPYLVLADFEAYVAAQKRVDELYRDEEAWTRAAILNTARCGMFSS DRSIRDYQQRIWQAKR >gi|289775432|gb|GG745511.1| GENE 358 404876 - 406972 2357 698 aa, chain + ## HITS:1 COG:malQ KEGG:ns NR:ns ## COG: malQ COG1640 # Protein_GI_number: 16131292 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Escherichia coli K12 # 1 685 1 684 694 1169 82.0 0 MESKRLDNAALAAGISPSYINAHGKPQSIAAVTKQRLLDAMHRSTAATKVAVNPLPNVKI FTHGKKMSLPVAGRGEYQWILTTEDGKQYQGKTRGGETLPLPAKLPEGYHSLTLTQEGER WHCRTIVAPARCYEPQPLKEGKKLWGTCVQLYTLRSEKNWGIGDFGDLRAMLPEIARRGG SFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFQRSEEAQAWWQSAATQQ ALQAARQTDDVDYTAVTTLKMTALRMAWKRFSRREDEQMTAFREFVLREGESLYWQAAFD ALHAWQVQQDPLRWGWPAWPKAFQDIDSPEVKAFCIEHEDDVSFYLWLQWLAWSQFAACW ETSQRDGMPIGLYRDLAVGVAEGGSETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMD PHIIAARAYEPFIDLLRANMQNCGALRIDHVMSVLRLWWIPYGETADHGAYVQYPVDDLL SLLALESQRHRCMVIGEDLGTVPVEIVSKLRNSGVYSYKVLYFESDAEKTFRAPALYPEQ SMAVATTHDLPTLRGYWESGDLTLGKALGLYPDEVVLRGLYQDRELAKQGLLDALHKYGC LPKRAGHKASLMSMTGILNRGMQRYIADSNSALLGLQPEDWLEMASPVNIPGTSTEYPNW RRKLSVTLEQMFADEQVNKLIKDLDKRRKAASKKAAAR >gi|289775432|gb|GG745511.1| GENE 359 407071 - 408387 1928 438 aa, chain - ## HITS:1 COG:STM3512 KEGG:ns NR:ns ## COG: STM3512 COG2610 # Protein_GI_number: 16766800 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 669 93.0 0 MPLIIVAIGVALLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIVSIKNGVGGTLGS LALIMGFGAMLGKLLADCGGAQRIATTLINKFGKKHIQWAVVLTGFTVGFALFYEVGFVL MLPLVFTIAASARIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLYGTI LAIPTVILAGPVFARFLKGIDKPIPEGLHNPKVFTEEEMPGFGVSVWTSLVPVILMAMRA VAEMILPKGHAFLPIAEFFGDPVMATLIAVLIALFTFGLNRGRSMEQINDTLTSSIKIIA MMLLIIGGGGAFKQVLVDSGMDKYIASIMHESNMSPLFMAWSIAAVLRIALGSATVAAIT AGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIRSWSVLE TIISVCGLVGCLLLGMVV >gi|289775432|gb|GG745511.1| GENE 360 408724 - 409299 889 191 aa, chain - ## HITS:1 COG:yhgI_2 KEGG:ns NR:ns ## COG: yhgI_2 COG0694 # Protein_GI_number: 16131290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Escherichia coli K12 # 97 191 1 95 95 190 95.0 1e-48 MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEDTDTALKFEQ LTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQIN PQLAGHGGRVSLMEITDDGLAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDL TEHQRGEHSYY >gi|289775432|gb|GG745511.1| GENE 361 409358 - 410032 168 224 aa, chain - ## HITS:1 COG:STM3510 KEGG:ns NR:ns ## COG: STM3510 COG1040 # Protein_GI_number: 16766798 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Salmonella typhimurium LT2 # 1 224 1 227 227 257 66.0 2e-68 MLTAHSLCWLCQMPLAVACWGICSRCSRALLACPPLCPQCGLPAATSHHPCGRCLQKPPP WHWLVAVNDYRPPLSGLVQQLKFHHRPELGPALARLLLQRLLQCDDLPPVDGMVGVPLWH RRRWRRGYNQCDELCRPLARWRGCVWHREGLTRQRAGAVQHSLNARQRRQNLKNAFQLEF AVEGLHIAIVDDVVTTGSTVAEISRLLLRNGAATVQVWCLCRTL >gi|289775432|gb|GG745511.1| GENE 362 410072 - 410845 810 257 aa, chain + ## HITS:1 COG:STM3509 KEGG:ns NR:ns ## COG: STM3509 COG0596 # Protein_GI_number: 16766797 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 409 76.0 1e-114 MNDIWWQTIGEGDCHLVLLHGWGLNAQVWDCITPQLASHFTLHLVDLPGYGRSGGYGAMS LEAMAQRVLELAPPQAVWLGWSLGGLVASQVAMMHPERVQALVTVASSPCFAARDGWPGI KPEVLAGFQQQLSDDFQRTVERFLALQTMGTESARQDARALKQAVLSLPMPSAEALNGGL EILRTVDLRQALVGLPIPFLRLYGRLDGLVPRKIVPLLDELWPESESILFDKAAHAPFVS HPAAFCEPLLALKTRLG >gi|289775432|gb|GG745511.1| GENE 363 410966 - 411235 327 89 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0320 NR:ns ## KEGG: Kvar_0320 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 89 1 89 89 149 100.0 5e-35 MKLVTGMVASLVIGTLSFGAFAAKEIQKEDVAKMNLTKVGSITTSRTTSPMDARRDLSKK ADELGGKYFVVIAGQKNEKTVHANADVYK >gi|289775432|gb|GG745511.1| GENE 364 411322 - 411534 228 70 aa, chain - ## HITS:1 COG:no KEGG:KPK_0335 NR:ns ## KEGG: KPK_0335 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 70 10 79 79 114 100.0 2e-24 MLALQGRMEAKQLSARLRTPQPLIDAMLERMEAMGKVVRISETSEGCLSGSCKSCPEGKA ACQQEWWALR >gi|289775432|gb|GG745511.1| GENE 365 411571 - 413889 3291 772 aa, chain - ## HITS:1 COG:STM3506 KEGG:ns NR:ns ## COG: STM3506 COG0370 # Protein_GI_number: 16766794 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Salmonella typhimurium LT2 # 1 772 1 772 772 1370 89.0 0 MKKLTVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGVFATTDHQVTLVDLPGT YSLTTISSQTSLDEQIACHYILSGDADMLINVVDASNLERNLYLTLQLLELGIPCVVALN MLDIAEKQQVRIDIDALAARLGCPVIPLVSTRGRGIEALKIALDRHQANSDIELVHYPQP LLREADLLAQQMSAQIPTRQRRWLGLQMLEGDIYSRAYAGDAADKLDIALANLSDEIDDP ALHIADARYQTIAAICDAVSNTLTAEPSRFTAAMDKVILNRFLGLPIFLFVMYLMFLLAI NIGGALQPIFDAGSVAVFIHGIQWLGYTLHFPDWLTVFLAQGIGGGINTVLPLVPQIGMM YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYVLGIVMAILTGLMLKHTIMRG EASPFVMELPVYHVPHIKSLIIQTWQRLKGFVLRAGKVIVIVSIFLSALNSFSLSGKVVD NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAEDIQNE EFNPQTFSLGEELLAAVDETWQGLKDTFSLSVLANPIEASKGDGEMATGAMGVMGSKFGS AAAAYSYLIFVLLYIPCISVMGAIARESSRGWMTFSILWGLNIAYSLSTLYYQTVSFSDH PRYSLVCILAVVLFNVVLFGLLRRARSRVDVSLLATRKTPASCCSSPAGDCH >gi|289775432|gb|GG745511.1| GENE 366 413918 - 414145 235 75 aa, chain - ## HITS:1 COG:STM3505 KEGG:ns NR:ns ## COG: STM3505 COG1918 # Protein_GI_number: 16766793 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Salmonella typhimurium LT2 # 1 74 1 74 75 135 90.0 2e-32 MQFTPDSAWKITGFSRDISPAYRQKLLSLGMLPGSSFHVVRVAPLGDPVHIETRRVSLVL RKKDLALIELEAVAQ >gi|289775432|gb|GG745511.1| GENE 367 414566 - 416896 1635 776 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 734 1 734 764 634 49 1e-180 MMNDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRL GYLRELEDRRQAILKSIAEQGKLTDALEKAITSTLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWNEPAHDPEAEAAKYINADNGIADSKAALDGARYILMERFAEDAALLAKV RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPIATVPSHRALAMFRGRNEGVLQLSLN ADPQFDEPPKESHGEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH TGQAAKAAVVVAALCEKYNVELVAIGNGTASRETERFFLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRHL KAVDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAKFADGVETMSDLLPGMILEGAVTN VTNFGAFVDIGVHQDGLVHISSLSDRFVEDPHTVVKAGDIVKVKVMEVDLPRKRIALTMR LDEQPGDSNARRGGGQDRPQGNRPAAKAAKPRGREAQPAGNSAMMDALAAAMGKKR >gi|289775432|gb|GG745511.1| GENE 368 416997 - 417470 697 157 aa, chain - ## HITS:1 COG:greBm KEGG:ns NR:ns ## COG: greBm COG0782 # Protein_GI_number: 16132230 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli K12 # 1 157 1 157 158 283 93.0 9e-77 MKTPLITREGYEKLKQEMDYLWRQERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCLEQLKIVDYSPQQEGKVFFGAWVEIENDEGDTKRFRIVGYDEIFGRKDYISI DSPMARALLKKEVGDLAIVNTPAGEASWYVNEIEYVK >gi|289775432|gb|GG745511.1| GENE 369 417698 - 418417 1012 239 aa, chain + ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|289775432|gb|GG745511.1| GENE 370 418414 - 419769 1696 451 aa, chain + ## HITS:1 COG:STM3501 KEGG:ns NR:ns ## COG: STM3501 COG0642 # Protein_GI_number: 16766789 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 438 1 438 450 838 94.0 0 MKRVRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTD KLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEDAGLRWAQHYEFLSQQMAHQLGGPT EVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIR IQNRPLVDLEHAALQVGRGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAG VSHDLRTPLTRIRLATEMMGEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMELAD LNAVLGEVIAAESGYEREIATALQAGEIPVRMHPLSIKRALANMVVNAARYGNGWIKVSS GSEASRAWFQVEDDGPGIKPEQREHLFQPFVRGDSARSTSGTGLGLAIVQRIIDNHNGRL EIGSSERGGLLIRAWLPVHRMLAPMKPTKES >gi|289775432|gb|GG745511.1| GENE 371 419847 - 421469 2241 540 aa, chain - ## HITS:1 COG:pckA KEGG:ns NR:ns ## COG: pckA COG1866 # Protein_GI_number: 16131280 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Escherichia coli K12 # 1 539 1 539 540 1046 92.0 0 MRVNHGLTPQDLKAYGINDVQDIVHNPSYDMLFQEELDPSLEGYERGVLTSLGAIAVDTG IFTGRSPKDKYLVRDDTTRDTVWWSDKGKGKNDNKPLSQETWQHLKGLVTHQLSGKRLFI VDAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPSDEELADFEPDFIVMNGAKCTNPQW KEQGLNSENFIAFNLTERIQLIGGTWYGGEMKKGMFSIMNYLLPLKGIASMHCSANVGEK GDVAIFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEAAEPDI YHAIRRNALLENVVVRADGTIDFDDGSKTENTRVSYPIDHIDNIVKPVSKAGHATKVIFL TADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQ YAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNL QIPTALPGVDTQILDPRSTYGSPEQWQEKADQLAKLFIENFEKYTDTPAGAALVAAGPQR >gi|289775432|gb|GG745511.1| GENE 372 421829 - 422707 1027 292 aa, chain - ## HITS:1 COG:STM3498 KEGG:ns NR:ns ## COG: STM3498 COG1281 # Protein_GI_number: 16766786 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Salmonella typhimurium LT2 # 1 292 3 294 294 530 88.0 1e-150 MTQHDQLHRYLFENYAVRGELVTVSETLEQILANHTYPQPVKTVLAELLVATSLLTATLK FAGDITVQLQGDGPLQLAVINGNNQQQLRGVARVQGDIADDADLKTMVGNGYLVITISPK EGERYQGVVGLEGDTLAACLEDYFQRSEQLPTRLIIRTGEHEGQPMAGGMLLQVMPAQDT QTTDFEHLATLTETIKAEELFTLPANDVLWRLYHEEEVTVYEPQSVEFKCTCSRERCAGA LKTLPDEEIDSILADEGEIDMHCDYCGNHYIFNAMDIAEIRNNASPADPQVH >gi|289775432|gb|GG745511.1| GENE 373 422732 - 423133 505 133 aa, chain - ## HITS:1 COG:ECs4242 KEGG:ns NR:ns ## COG: ECs4242 COG1188 # Protein_GI_number: 15833496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 192 87.0 1e-49 MKEKPSETVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPGKIVELDAMLTLRQG NDERTVRIVGITEQRRPASEAVALYEETAESIEKREKVALARKMNALTMPHPDRRPDKKE RRDLMRFKHGESE >gi|289775432|gb|GG745511.1| GENE 374 423130 - 423813 787 227 aa, chain - ## HITS:1 COG:ECs4241 KEGG:ns NR:ns ## COG: ECs4241 COG1011 # Protein_GI_number: 15833495 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 221 16 236 237 395 84.0 1e-110 MHFDIAWQEVDTVLLDMDGTLLDLAFDNYFWQTLVPETWGAARGLNLQEAKDAMRQEYHA VQHTLNWYCLDYWSERLGLDICAMTSEQGPRATLREDTVPFLDALKACGKRRILLTNAHP HNLAVKLKHTGLDAHLDLLLSTHTFGYPKEDQRLWRAVAEETGLEAHKTLFVDDSEAILD AAREFGIRYCLGITNPDSGLAEKQYLRHPGLNDYRRLIPSLTPKERR >gi|289775432|gb|GG745511.1| GENE 375 423874 - 426009 2105 711 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0332 NR:ns ## KEGG: Kvar_0332 # Name: not_defined # Def: intracellular growth attenuator IgaA # Organism: K.variicola # Pathway: not_defined # 3 711 1 709 709 1445 99.0 0 MGMGTFLIFLTALLICVLLIGWWYRAHARRRRLPLLHAFSDATTRPLPADERQAIEKYLA ELSRTLQVPASGATTAPVALALNEQSDTVYAVTRAITRYGITTDAPNKWRYFLDSVEVHL PPFWEQHINDENSVELIPTDSLPLVITLNGHSLSDYRQEAQSYALERASATQASIRGEES EQVELRQIRRESREEHALNRPDGLREAILIVASFLFFYFSLIGPAVFTPWLVAAGVLLLA AGVGGIYAPPRRAALREIHCLRGVPKRWGLFGENDQEHINNISLGIIDLIYPRHWQPWIA QDLGQQTDIDIYLNRHVARQGRYLSLHDEVKNFPLQYWLRSAIIAAGALVVVIMLWVSVP LNMPFKFTLSWLKGAQTIEATTVDQLAKAHVRIGDTLRLTGTGMCNIRTPGSWSAKEDSP FLPFDCSQIVWNDAPPLPLPESDIVSKATALMQSVQRQLHPETDDDSRVSPALRSAIQKS GMVLLDDFGDIVLKTNDLCSAKDDCLRLKNALVNLGNTRNWEALTKRATAGKLDGVNVLL RPVSAESLENLVTTSTAPFVMRETSRAAQALNSPAPGGFLIASDEGSVLVNQPWPAVSLY DYPAHEQWSELRRLAGMLMHTPFHAEGIVTNLFTDANGTQHVNLHRIPDRSGLWRYLGIT LLLLSMLGCMAYHGIQALRRYQRHRQRMEEIQKYYESCLNPVLLPASDPQD >gi|289775432|gb|GG745511.1| GENE 376 426318 - 426884 807 188 aa, chain + ## HITS:1 COG:STM3494 KEGG:ns NR:ns ## COG: STM3494 COG0494 # Protein_GI_number: 16766782 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 188 10 197 198 327 90.0 9e-90 MTMSKSLQKPTILNVETVARSRLFNVESVDLEFSNGVRRVYERMRPSTREAVMIVPIVDD HIILIREYAVGTESYELGFSKGLIDPGETVDEAANRELKEEVGFGANKLTFLKKLSMAPS YFSSKMNILVAEDLYPESLPGDEPEPLPQVRWPLAQLMSLLDEEDFNEARNVSALFLVRE WLLAQGRL >gi|289775432|gb|GG745511.1| GENE 377 426938 - 429496 2921 852 aa, chain - ## HITS:1 COG:STM3493 KEGG:ns NR:ns ## COG: STM3493 COG5009 # Protein_GI_number: 16766781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Salmonella typhimurium LT2 # 1 852 9 858 858 1533 88.0 0 MKFVKYLLILAVCCVLLGAGSIFGLYKYIEPQLPDVATLKDVRLQIPMQVYSADGELIAQ YGEKRRIPVTLQQIPPELVKAFIATEDSRFYEHHGVDPVGIFRAASVAMFSGHASQGAST ITQQLARNFFLSPEKTLMRKIKEAFLAIRIEQLLNKDEILELYLNKIYLGYRAYGVGAAA QVYFGKPIDQLTLSEMAVIAGLPKAPSTFNPLYSMDRATARRNVVLSRMLSEGYITQAQY DEARSEAIDASYHAPKIAFSAPYLSEMVRQEMVNRYGEQAYEDGYRVYTTITRKNQQAAQ QAVRNNVLDYDMRHGYRGPASVLWKVGETPWETKKIIDSLKRQSGYGPLFPAVVTSANAQ EAVALLANGDSVSLTMDGVRWARRFISDTQQGATPRKVNDVLQAGQQIWVRKVADGWWLS QVPDVNSALVSINPQNGAIIALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL TLASMLNDVPISRWDAGAGSDWRPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDY AAEYLQRFGFPAQNIVHTESLALGSASFTPLQVARGYSVMANGGFLVNPFFISKIENDQG GVLFEERPKIACPQCDLPVIYGDTPKSNVLENKDVEDVATSTEPQNGNVPPQPQLEQANQ SLVAQSGAQEYAPHVINTPLSFLIKSALNSNIFGEPGWMGTGWRAGRDLQRHDIGGKTGT TNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGAIKDQISGYEGGAKSAQPAWDS FMKSVLEGVPEEPLTPPPGIVTVNIDRSTGQLANGGNSRAEYFIEGTQPTQQAVHEVGTT LTDGGGETHELF >gi|289775432|gb|GG745511.1| GENE 378 429615 - 430415 705 266 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0335 NR:ns ## KEGG: Kvar_0335 # Name: not_defined # Def: HofM protein # Organism: K.variicola # Pathway: not_defined # 1 266 1 266 266 482 98.0 1e-135 MAFRNWRIGMHIQQDSIAIVALLHERSHWALRRWWRIPLPPGLVRQGMVVDVSALGAQLS AWRRELPVQHQVSIAFPAVRTLQKRLPYPQFALRDREQATWIASAMTQQLAMPAASLSID YAPTSRDDGWQVTAAQRLDINVLRTLAGRLRLRVAAIVPDASALGAFVPLLNPQSQGLAW RDENHWLWATQEAWGCVTCDEVKSLSQLAEQLQVPLRLCADAGDEASSLDVWQAIHRRQP PLPVDGDRYAIALGLALGSEHHDACR >gi|289775432|gb|GG745511.1| GENE 379 430399 - 430932 378 177 aa, chain + ## HITS:1 COG:ECs4236 KEGG:ns NR:ns ## COG: ECs4236 COG3166 # Protein_GI_number: 15833490 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Escherichia coli O157:H7 # 1 175 1 175 179 73 35.0 2e-13 MTHAVNLLPWRDLRRRQRLRFILLIAAGIMLLGLMILQVCRTVRLQHLALATLHATADAQ LLASLKQRELPMREAWQQHQRHRQQQRRRAAIAAWQPRLLALAADLPAQTWLTRLDYQGA VLTVNGLALNLQALAGLERILTNVAGFAPAKAGGTQRDAEGRWQFSFTLAEERADVD >gi|289775432|gb|GG745511.1| GENE 380 430922 - 431350 317 142 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0337 NR:ns ## KEGG: Kvar_0337 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 142 1 142 142 244 97.0 9e-64 MWISSRRSQAVLLTLLAMGGLGFGVTLWCAAGPPLAAVSRDPVLQTQWRRVMALRMPAGE TPGGRIDKQPFSPIAIPLAGVKLIAWRPQGSGGEMELTLPWQTLPAFFSWLARCGMNPRS FSLEREAQVLRLRLQLEAEDGT >gi|289775432|gb|GG745511.1| GENE 381 431340 - 431720 214 126 aa, chain + ## HITS:1 COG:no KEGG:KPN_03763 NR:ns ## KEGG: KPN_03763 # Name: yrfA # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 111 1 111 127 175 86.0 6e-43 MGRKRWALLWLPLSLLAAERDPFQPVEDPCRTVQLSQWRYGGAAGDGAGWTGFLQDGSGK WRRVRMDDQLPTGWRVSRLTTGELEIATPAGCEPPAWRWQREGKQYDAMDKSTASAAAAG GARRPK >gi|289775432|gb|GG745511.1| GENE 382 431659 - 432897 1292 412 aa, chain + ## HITS:1 COG:ECs4233 KEGG:ns NR:ns ## COG: ECs4233 COG4796 # Protein_GI_number: 15833487 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Escherichia coli O157:H7 # 2 410 3 410 412 517 69.0 1e-146 MRWISLLLLLLPLAAPAARNEKTISLVVDDAPVAHVLQALAEMNHKNLVVAPDVSGTLSL HLQKVPWTQALRAVADSAGLSLQQQGTVIYAHTQAWQKANQAQREAEQEKRLQNLPLQAE NVTLHYADAEELAKTGGKLLSARGHLMADKRTNRLLIRDDARHLPALKAWAQEMDLPVGQ VELAAHIVSMSETSLRELGVKWRLAEAGGSPGSGQITTLSSDMSVNDASTRAGFNIGKIN GRLLELELSALERKQQVDIIASPRLLASHMQPASIKQGSEIPYQVSSGESGATSVEFKEA VLGMEVTPTVLQQGRVRLKLRISENTPGQVLKQDNGEALAIDKQEIETLVEVRSGETLAL GGIFSQKNKTARDSVPLLGDIPVLGRLFRRDGKDNERRELVVFITPRILAVR >gi|289775432|gb|GG745511.1| GENE 383 433168 - 433689 550 173 aa, chain + ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 173 68 240 240 312 96.0 2e-85 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDVEGEEGFR DREEKIINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLQVDAPPREVLEALADERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|289775432|gb|GG745511.1| GENE 384 433856 - 434839 1163 327 aa, chain + ## HITS:1 COG:STM3486 KEGG:ns NR:ns ## COG: STM3486 COG0337 # Protein_GI_number: 16766774 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Salmonella typhimurium LT2 # 1 325 38 362 362 567 87.0 1e-161 MLVTNETLAPLYLDTVRSVLEQAGVNVDSVILPDGEQYKSLAVMDTVFTALLQKPHGRDT TLVALGGGVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAF WQPVSVVVDLNCLKTLPARELASGLAEVIKYGVILDGEFFSWLENNIDALLALDEKAMAY CIRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAAH TSERLGQFRAQDTQRIIDLLKRAGLPVRGPQEMSAQAYLPHMMRDKKVLAGDMRLVLPLA IGSSELRGGVPHDVVLGAIADTQQAQQ >gi|289775432|gb|GG745511.1| GENE 385 434924 - 436213 859 429 aa, chain + ## HITS:1 COG:STM3485 KEGG:ns NR:ns ## COG: STM3485 COG3266 # Protein_GI_number: 16766773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 429 1 425 425 265 59.0 1e-70 MDDFKPEDDMKADRNDRRAGRSRQSSERDADPQINFDDVDLDADEGRPTRAGKARREREE EEFEEELDAEDEELLEEQPVERRPRKRKKAPAKPASRQYIMMGVGILVLLLLIVGIGSAL KSPSSSSQQTASGEKSINLSDDQSTSTPAAGQDQTAAANTTPQQDVTVPPIAANPTQGQA VSEPQGQQRIEVQGDLNNALTQQQGQLDGAVANSTLPTEPATVAPIRNGANSTAAPRQAT ERQTAATPRPTERKHTVIEAKPQTKPQAVAKAPVETKPVQPKHVESAATTAPAKTTVTES KPVATAQSKPVATASTTTAAPAATAAPAAKSGKTAGDVSSMKSAPSGNYTLQLSSSSNYD NLNNWAKKEKLDRYVVYETSRNGQPWYVLVSGIYASKEEAKRAVTSLPADVQAKNPWAKP LHQVQADLK >gi|289775432|gb|GG745511.1| GENE 386 436292 - 437119 825 275 aa, chain + ## HITS:1 COG:ECs4229 KEGG:ns NR:ns ## COG: ECs4229 COG0338 # Protein_GI_number: 15833483 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 271 1 270 278 464 83.0 1e-131 MKKNRAFLKWAGGKYPLLDDIKKHLPEGECLIEPFVGAGSVFLNTDFSRYILADINSDLI GLYNIVKLRTDEYVAAAREMFVPENNVAERYYQYRDEFNQSQDPLRRAVLFLYLNRHGYN GLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAEFYCESYEECMQRADSRAVVYC DPPYAPLTATANFTAYHTNSFNLEQQVLLAQKAESLMKKRIPVLISNHRTPLTQEWYKNA AETHIVKVRRSISSNGGTRKKVDELLALYRPPKTK >gi|289775432|gb|GG745511.1| GENE 387 437137 - 437814 879 225 aa, chain + ## HITS:1 COG:STM3483 KEGG:ns NR:ns ## COG: STM3483 COG0036 # Protein_GI_number: 16766771 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 421 94.0 1e-118 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG ITAPIDVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPA TSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGV KASNIGEIAAAGADMFVAGSAIFGQPDYKKVIDQMRSELAKVSHG >gi|289775432|gb|GG745511.1| GENE 388 437807 - 438568 1000 253 aa, chain + ## HITS:1 COG:STM3482 KEGG:ns NR:ns ## COG: STM3482 COG0546 # Protein_GI_number: 16766770 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Salmonella typhimurium LT2 # 1 253 1 252 252 412 81.0 1e-115 MDKLQAIRGIAFDLDGTLVDSAPGLTSAVDNALYALELPVAGEERVVTWIGNGADVLMER ALTWARQERATLRAAMGKPSVDDHDIPQDEQLRILRKLFDRYYAETAEEGSFLFPAVADT LGALHAKGLPLALVTNKPTPFVAPLLDALDIAKYFTVVIGGDDVQNKKPHPEPLLLVAEK LSLTPAELLFVGDSRNDIQAAKAAGCCSVGLTYGYNYGEPLALSEPDYLFDQFNELLPAL GLPHSETQELKHD >gi|289775432|gb|GG745511.1| GENE 389 438561 - 439565 1556 334 aa, chain + ## HITS:1 COG:STM3481 KEGG:ns NR:ns ## COG: STM3481 COG0180 # Protein_GI_number: 16766769 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 658 94.0 0 MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDPQQLRKAT LDTLALYLACGIDPQKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAEN INAGLFDYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIAQRFNAIYGDVFKVPEPFIP KSGARVMSLLEPTRKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDLKEK AGVSNLLDILSAVTGKTIPELEQHFEGKMYGHLKGEVAEAVSGMLTELQERYHRFRNDEA FLNQVMKDGAEKASARASQTLKAVYEAIGFVARP >gi|289775432|gb|GG745511.1| GENE 390 439641 - 441014 1433 457 aa, chain - ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 457 1 247 247 451 88.0 1e-126 MDHLPIFCQLRQRDCLLVGGGDVAERKARLLLDAGANVTVNALDFTPQFQVWADSQMLTL VQGEFIPSLLDTCWLAIAATDNETVNQQVSDAAEARRIFCNVVDAPRQASFIMPSIIDRS PLMVAVSSGGTSPVLARLLREKLESVLPLHLGQLARYAGHLRARVKQQFASVGERRRFWE KLFVNDRLAQSLANDDRQAVADTTEQLLTEPLEHRGEVVLVGAGPGDAGLLTLKGLQQIQ QADVVVYDRLVSDDIMNLVRRDADRVFVGKRSGYHCVPQEEINQILLREAQKGKRVVRLK GGDPFIFGRGGEELETLCEAGIPFSVVPGITAASGCSAYSGIPLTHRDFAQGVRLVTGHL KTGGELDWANLAVEKQTLVFYMGLNQAPAIREKLLAHGMAEDMPAAIVENGTAVSQKVVS GTLGQLDILAQQMASPALIIVGRVVGLRDKLNWFSNH >gi|289775432|gb|GG745511.1| GENE 391 441167 - 441493 431 108 aa, chain - ## HITS:1 COG:STM3475 KEGG:ns NR:ns ## COG: STM3475 COG2146 # Protein_GI_number: 16766763 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Salmonella typhimurium LT2 # 1 108 1 108 108 177 77.0 4e-45 MSQWVNICKIDDILPATGVCAQLGQQQVAVFRPYQDDRVFAISNIDPFFNASVLSRGIIA EHDGALWVASPLKKQRFRLSDGLCMEDASHSIARFDARVKDGQVQLKA >gi|289775432|gb|GG745511.1| GENE 392 441490 - 444033 3140 847 aa, chain - ## HITS:1 COG:STM3474 KEGG:ns NR:ns ## COG: STM3474 COG1251 # Protein_GI_number: 16766762 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Salmonella typhimurium LT2 # 1 846 1 846 847 1672 95.0 0 MSKVRIAIIGNGMVGHRFIEELLDKAPAGQFDITVFCEEPRIAYDRVHLSSYFSHHTAEE LSLVREGFYEKHGVKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKG AETQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPML MAEQLDQMGGEQLRRKIESMGVKVHTSKNTKEIVQQGTEARKTMHFADGSELQVDFIVFS TGIRPRDKLATQCGLAVAQRGGIMVNDSCQTSDPDIYAIGECASWNNRVYGLVAPGYKMA QVAVDHLLGSENSFTGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEVYKRLI VSADNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHAGSGKPSIGVDKLPD SAQICSCFDVSKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE VNNNLCEHFAYSRQELFHLIRVEGIKTFDELLEKHGQGYGCEICKPTVGSLLASCWNEYI LKPQHTPLQDTNDNFLANIQKDGTYSVIPRSAGGEITPEGLVAVGRIAREFNLYTKITGS QRIGLFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVE LENRYKGIRTPHKMKFGVSGCTRECAEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL AADLDRETLIKYLDRFMMFYIRTADKLTRTAPWLDNMEGGIDYLRSVIIDDKLGLNDHLE EELARLRAAFACEWTETVNNPAAQTRFKHFINSDQRDPNVQVVPERDQHRPATPYERIPV TLVEENV >gi|289775432|gb|GG745511.1| GENE 393 444272 - 445594 1327 440 aa, chain + ## HITS:1 COG:PM0565 KEGG:ns NR:ns ## COG: PM0565 COG0402 # Protein_GI_number: 15602430 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Pasteurella multocida # 8 415 2 409 420 690 78.0 0 MTAAPLWLIQNVRLADRDGLWQIAIDKGRFGEITPMGEARDESYEVLNARGGLAIPPFIE PHIHLDTTQTAGEPHWNQSGTLFEGIERWAERKALLSHEDVKARAWKTLKWQIANGVQFV RTHVDVSDPTLTALKAMLEVKREVAPWVELQIVAFPQEGILSYPNGEALLEEALKLGADV VGAIPHFEFTREYGVESLHIAFRLAQKYDRPLDIHCDEIDDEQSRFVETVAALALKAGIG ARVTASHTTAMHSYNGAYTSRLFRLLKLSGINFVANPLVNIHLQGRFDDYPKRRGITRVK ELMAAGINVCFGHDDVFDPWYPLGTGNMLQVLHMGLHVCQLMGYQQINDGLKLITDNSAR TFGLEDYGIVSGNPANLIILPAENGFEAVRCQVPVRWSIRQGRVIATTQLAQTWIQTDRG GEELSFMRNSPLADAKGPKA >gi|289775432|gb|GG745511.1| GENE 394 445591 - 446778 1779 395 aa, chain - ## HITS:1 COG:STM3473 KEGG:ns NR:ns ## COG: STM3473 COG0477 # Protein_GI_number: 16766761 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 392 1 391 393 609 90.0 1e-174 MTNSNRIKLTWISFFSYALTGALVIVTGMVMGNIADYFHLPVSSMSNTFTFLNAGILISI FLNAWLMEIVPLKTQLRFGFILMVLAVAGLMLSHSLALFSASMFVLGLVSGITMSIGTFL ITHMYEGRQRGARLLFTDSFFSMAGMIFPMVAAVLLARSIEWYWVYACIGLVYVAIFVLT FGCDFPVLGKKAQSENSQPVVKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKSLGMS LGDAGKLVSDFWMSYMIGMWSFSFILRFFDLQRILTVLAGLATVLMYLFINGSPEHMPWF ILTLGFFSSAIYTSIITLGSQQTRVASPKLVNFILTCGTIGTMLTFVVTGPIVATSGPLA ALHTANGLYAVVFVMCFILGFVSRHRQNNAQAASH >gi|289775432|gb|GG745511.1| GENE 395 447056 - 447625 673 189 aa, chain + ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 189 1 190 190 329 91.0 2e-90 MLKSTLAAMAAVFAISAFSPAMAAKGDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVN SGFYNNTTFHRVIPGFMVQGGGFNEQMQQKQPNPPIKNEADNGLRNTRGTIAMARTADQD SATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVQTHNVGPYQNVPTKPV VILSAKVLP >gi|289775432|gb|GG745511.1| GENE 396 447732 - 447899 160 55 aa, chain + ## HITS:1 COG:no KEGG:KPN_03748 NR:ns ## KEGG: KPN_03748 # Name: yhfG # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 55 1 55 55 69 98.0 4e-11 MRPLTEKQKSRLWEQTRNTNFQASRRLEGVTVPLVTLTAEEALARLATLRREYER >gi|289775432|gb|GG745511.1| GENE 397 447889 - 448491 707 200 aa, chain + ## HITS:1 COG:STM3470 KEGG:ns NR:ns ## COG: STM3470 COG2184 # Protein_GI_number: 16766758 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Salmonella typhimurium LT2 # 1 200 1 200 200 290 70.0 2e-78 MSDKFGDERDPYLYPALNVLRNRLGIRQAKNLQQAAFEMTALRAATLPLGPRVRGLPYLC AIHHQLYQDLFDWAGRLREVNLYLGDTPFCHFARIEEEGNALMQALEQEDYLNGLPRETF IERLSWFYGEINVLHPFRLGNGLTQRIFFEQLAIHAGYLLDWRDVDPAGWSAACQQSAMG DPAPLVAIFRKVVSEARESE >gi|289775432|gb|GG745511.1| GENE 398 448524 - 449087 669 187 aa, chain + ## HITS:1 COG:pabA KEGG:ns NR:ns ## COG: pabA COG0512 # Protein_GI_number: 16131239 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli K12 # 1 187 1 187 187 324 81.0 5e-89 MILLIDNYDSFTWNLYQYFCELGAEVLVRRNDALTLEEIAALAPEKIVISPGPCTPNEAG ISLAVIRHYAGKTPLLGVCLGHQAIAQAFGATIVRAAQVMHGKTSLIEHNGEGVFQGLNN PLTVTRYHSLVIDPPTLPPEFIVTARSASAEIMGIRHRDWDLEGVQFHPESILSEQGHQL LENFLKR >gi|289775432|gb|GG745511.1| GENE 399 449178 - 450398 1407 406 aa, chain + ## HITS:1 COG:argD KEGG:ns NR:ns ## COG: argD COG4992 # Protein_GI_number: 16131238 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 404 1 404 406 732 88.0 0 MATEQPAITRATFDEVILPIYAPAEFIPVKGKGSRVWDQQGKEYVDFAGGIAVTALGHCH PALVAALHEQGETLWHTSNVFTNEPALRLGRKLVEATFAERVVFMNSGTEANETAFKLAR HYAVTRHSPYKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIVHVPFNDLQAVK AVMDDHTCAVVVEPIQGEGGVTAATPAFLQGLRELCDQHQALLVFDEVQCGMGRTGSLFA YMHYGVTPDILTSAKALGGGFPVSAMLTTHEIASAFHAGSHGSTYGGNPLACAVANAAFD LINTPAVLDGVSAKRELFVKHLQQLDAEFDLFSDIRGMGLLIGAELKPQHKGRARDFLYA AAQAGVMVLNAGPDVMRFVPSLIIDEQDIAEGMARFAQAVAKVING >gi|289775432|gb|GG745511.1| GENE 400 450388 - 452466 2584 692 aa, chain - ## HITS:1 COG:STM3467 KEGG:ns NR:ns ## COG: STM3467 COG1289 # Protein_GI_number: 16766755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 692 1 691 695 1190 86.0 0 MWRRLIYHPEVNYALRQTLVLCLPVAIGLLLGHLQQGLLFSLVPACCNIAGLDTPHKRFF KRLIIGGCLFAGCSLVVQLLLAQAIPLPLILSGLALLLGVTAEISSLHARLLPASLIAAI FTLSLAGNMPIWEPLLIYAFGTLWYGVFNWLWFWLWREQPLRESLSLLYRELADYCEAKY SLLTQHTDPSTALPPLLTRQQKVVDLITQCYQQMHMLAANQRNDHKRLLRAFQVGLDLQE HISVSLHQPEEVQKLVERSHAEAVIRWNAQTVAARLRVLADDILYHRFPQRFQMDKQIEA LEKIARQHPDNPVGQFCAWHFSRIARVLHTQRPLYARDLMADKERRLPLFPALKNYLSLK SPALRNAARISVMLSVASLMGNALHLPKPYWILMTVLFVTQNGYGATRVRIVHRAAGTLA GLVIAGLTLHFHVPESYTLSGMLLITLLSYLIIRKHYGWAMVGFTVTAVYTLQLLTLNGE QFIVARLIDTLIGCLIAFGGMVWLWPQWQSGLLKKNAHDALEADQQAIRLILSADPKAPA LAYQRMRVNQAHNALYNSLNQAMQEPGFNTHYLEDMKLWVTHSQFIVEHINAMTTLAREH TMLTPDLTQRYLESCEIALQRCQQRLDSDGPGSAGDANILESPETEVPNGPLSTLEQHLQ RILGHLNTMHTISSVAWRQRPHHGIWLRKISR >gi|289775432|gb|GG745511.1| GENE 401 452518 - 453150 838 210 aa, chain - ## HITS:1 COG:STM3466 KEGG:ns NR:ns ## COG: STM3466 COG0664 # Protein_GI_number: 16766754 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Salmonella typhimurium LT2 # 1 210 1 210 210 418 100.0 1e-117 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQ MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|289775432|gb|GG745511.1| GENE 402 453457 - 453861 571 134 aa, chain + ## HITS:1 COG:ECs4207 KEGG:ns NR:ns ## COG: ECs4207 COG1765 # Protein_GI_number: 15833461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 241 91.0 3e-64 MQARVKWVEGLTFIGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR HEVTNCEVKLTSERREEAPRLFTHINLHFIVTGKALKDAAVSRAVDLSAEKYCSVALMLE KAVKITHSYEVIEA >gi|289775432|gb|GG745511.1| GENE 403 453917 - 454786 1219 289 aa, chain - ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 288 1 288 289 561 93.0 1e-160 MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR DQGKHISYFGPEANDFGLLEQTFVDYGRHGKGQSRKYLHTYDEAVPWNQVPGTFTPWQPL PEPTDVLFYEGLHGGVVTPHHDVASHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM DSVVRSMEDYINFITPQFSRTHINFQRVPTVDTSNPFAAKTIPSLDESFVVIHFRNLQNI DFPWLLAMLQGSFISHMNTLVVPGGKMGLAMELIMTPLVERLMEGRKIG >gi|289775432|gb|GG745511.1| GENE 404 454823 - 455041 344 72 aa, chain - ## HITS:1 COG:ECs4205 KEGG:ns NR:ns ## COG: ECs4205 COG3089 # Protein_GI_number: 15833459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 70 1 70 72 117 84.0 7e-27 MIIPWQDLDPETLDNLIESFVLREGTDYGEHERSLADKVADVKQQLKRGEAVLVWSELHE TVNIMPRALFNG >gi|289775432|gb|GG745511.1| GENE 405 455038 - 456060 1110 340 aa, chain - ## HITS:1 COG:STM3462 KEGG:ns NR:ns ## COG: STM3462 COG0429 # Protein_GI_number: 16766750 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Salmonella typhimurium LT2 # 1 338 16 353 355 597 83.0 1e-171 MVEIIPTDMTPPENDSREFHPMRGVGNRHLQTMLPRLIRRKLRFTPHWQRLELPDGDFVD LAWSEDPHQARHKPRLVVFHGLEGSLHSPYAHGLIHAAMQRGWLGVVMHFRGCSGEPNRN NRIYHSGETEDGTWFLHWLQREFGPAPTAAVGYSLGGNMLGCLLAEEGDRCPLDAAVIVS APFMLEACSYHMDKGFSRVYQRYLLNLLKANASRKLKAYPGSLPVDLRQLKGMRRIREFD DMITAKIHGFADALDYYRQCSAMPRLSDITKPTLIIHAKDDPFMDHHSIPPQEQLPANVE YQLTEQGGHVGFVGGTLRKPEMWLERRIPDWLNRWLEAPV >gi|289775432|gb|GG745511.1| GENE 406 456262 - 458166 2406 634 aa, chain - ## HITS:1 COG:ECs4203 KEGG:ns NR:ns ## COG: ECs4203 COG0488 # Protein_GI_number: 15833457 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 634 1 634 637 1146 94.0 0 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLSLLKNEISADGGSMTF PGSWQLAWVNQETPALPQPAIDYVIDGDREYRQLEAALQQANERNDGHAIATVHGKLDAI DAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLEKWLKGYTGTLILISHDRDFLDPIVDKIIHIEQQTMFEYTGNYSSFEVQRAT RLSQQQAMYESQQQRVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHF SFRQPESLPNPLLKMEKVSAGYGERIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELQPVSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQ GDKVSEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLIRSTTDDLYLVHDGKVEPFDGDLEDYQQWLSDSQKQESQSSDAPKESGNSA QARKDQKRREAELRSQTQPLRKEIARLEKEMDKLNAQLASAEEKLGDSELYDASRKAELT ECLQQQASAKSGLEECEMAWLEAQEQLEQMLQEG >gi|289775432|gb|GG745511.1| GENE 407 458343 - 458903 434 186 aa, chain + ## HITS:1 COG:ECs4202 KEGG:ns NR:ns ## COG: ECs4202 COG2249 # Protein_GI_number: 15833456 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 181 2 183 184 313 85.0 1e-85 MSQTAKVLLLYAHPESHDSVANRVLLEPALQLPNVTVHDLYAHYPDFFIDIAHEQDLLRQ HEVIVFQHPLYTWSCPALLKEWLDRVLSRGFASGAGGNELAGKYWRSVITTGEPESAYRR DANRYPMNDILRPFELTAGMCRMHWMSPIIVYWARRQQPEELRSRARAYRDWLANPLTAG GIHGGI >gi|289775432|gb|GG745511.1| GENE 408 458890 - 460695 1049 601 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 558 9 567 618 408 38 1e-112 MAGSDLLLAGVLFLFAAVIAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFS ELGVVFLMFIIGLELNPAKLWRLRSSIFGVGAAQVMLSAAILGGLLMTTGFSWQAAVVGG IGLAMSSTAMALQLMREKGMSRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHVNW LTVGMKVLAFAGMLIGGRYLLRPVFRFIASSGVREVFTAATLLLVLGSALFMEALGLSMA LGTFIAGVLLAESEYRHELEIAIDPFKGLLLGLFFISVGMALNLGVLYTHLLWVAVSVAV LVAVKMLVLYLLARLYGLRSSERMQFAGVLSQGGEFAFVLFSLPASQRLFQHDQMALLLV AVTLSMMTTPLLMKGIDKLLSRRLNPADDTDEAPWVEDDKPQVIIVGFGRFGQVIGRLLM ANKMRITVLERDISAVNLMRNYGYKVYFGDATQLELLRSAGAEEAQSIVITCNEPEDTMR LVEMCQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSSALELGRKALITLGMHPHQ AQRAQLHFRRLDMRMLRELMPVHTDTVQVSRVREARRELEEIFQREMQKESRQLDGWDEF E >gi|289775432|gb|GG745511.1| GENE 409 460707 - 460907 322 66 aa, chain + ## HITS:1 COG:Z4708 KEGG:ns NR:ns ## COG: Z4708 COG3529 # Protein_GI_number: 15803863 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 116 90.0 1e-26 MAVRKRFIAGAKCPACQAQDSLAMWRENNVDVVECVKCGHQMREADKEAREHVRKEEQVI GIFHPD >gi|289775432|gb|GG745511.1| GENE 410 461001 - 461591 599 196 aa, chain + ## HITS:1 COG:STM3455 KEGG:ns NR:ns ## COG: STM3455 COG1047 # Protein_GI_number: 16766744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Salmonella typhimurium LT2 # 1 147 1 147 196 262 97.0 3e-70 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLENALDGHEVGDKFDV AVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITEVEDDHVVVD GNHMLAGQNLKFNVEVVAIREATAEELEHGHVHGAHGHDHDHDHGHDGCCGGHGHDHGHD HEHGKGGCGNGGCGCH >gi|289775432|gb|GG745511.1| GENE 411 461650 - 461868 320 72 aa, chain - ## HITS:1 COG:ECs4199 KEGG:ns NR:ns ## COG: ECs4199 COG2900 # Protein_GI_number: 15833453 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 86 80.0 1e-17 MHDSTLETRLAELESRLAFQEITIEDLNKTVTAHEIEMAKMREHMRLMIEKLKATQPSHI ASQAEETPPPHY >gi|289775432|gb|GG745511.1| GENE 412 462091 - 462921 977 276 aa, chain + ## HITS:1 COG:ECs4198 KEGG:ns NR:ns ## COG: ECs4198 COG0545 # Protein_GI_number: 15833452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 260 1 259 270 365 87.0 1e-101 MKSLFKVTLLATTMAVALNAPLTFAADTAAKAAPAAESKSAFKNDDQKSAYALGASLGRY MENSLKEQEKLGIKLDKAQLIAGVQDAFADKSKLSDQEIEQTLQAFETRVKTAAQQKMEK DATENEAKGKTFRDSFAKEKGVKTSKTGLLYKVEKEGTGDAPKDSDTVVVNYKGTLIDGK EFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPDLAYGKTGVPGIPANSTL VFDVELLDIKPAPKADAQPEAAGEAKAADANADAKK >gi|289775432|gb|GG745511.1| GENE 413 463090 - 463812 792 240 aa, chain + ## HITS:1 COG:yheO KEGG:ns NR:ns ## COG: yheO COG2964 # Protein_GI_number: 16131225 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 5 244 244 449 95.0 1e-126 MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS AIRIANGEHTGRQIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSVTIAIRNR DHRVIGLLCINMNLDVPFSQIMSTFIPPETPEVNSPVNFASSVDDLVAQTLEFTIEEVNA DRSVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGLDK >gi|289775432|gb|GG745511.1| GENE 414 463812 - 464198 266 128 aa, chain + ## HITS:1 COG:STM3451 KEGG:ns NR:ns ## COG: STM3451 COG1553 # Protein_GI_number: 16766740 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 192 78.0 2e-49 MRFALTVTGPAYGTQQASSAWQFAQAVLQEGHELACVFFYREGVLNANQLTAPASDEFDL VRAWQSLHDEQGVALHICVAAALRRGVTDEREAQQLALASHNLQPGFTLSGLGALAEAAL TCDRMVQF >gi|289775432|gb|GG745511.1| GENE 415 464198 - 464557 365 119 aa, chain + ## HITS:1 COG:ECs4195 KEGG:ns NR:ns ## COG: ECs4195 COG2923 # Protein_GI_number: 15833449 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 176 73.0 1e-44 MKRVAFIFSSAPHGSAAGREGLDALLATSALTDEIGVFFVGDGVFQLLPDQRPGAVLARD YIATFKLLSLYDIDQCWLCADSARERGLDPATPWAVDVECLAPDALRARLHEFDVILRF >gi|289775432|gb|GG745511.1| GENE 416 464565 - 464852 238 95 aa, chain + ## HITS:1 COG:ECs4194 KEGG:ns NR:ns ## COG: ECs4194 COG2168 # Protein_GI_number: 15833448 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 118 61.0 3e-27 MLHTLSVSPWHADIAAMLRVMDHGDDLLLLSDGVTAAIAGGRFLEILQSAPITLYVLQDD VDARGLAGQIADSVGRVSYTDFVRLTVKHAGQLAW >gi|289775432|gb|GG745511.1| GENE 417 464977 - 465351 646 124 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972235|ref|YP_001337381.1| 30S ribosomal protein S12 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 124 1 124 124 253 100 9e-66 MATINQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNG FEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVK RPKA >gi|289775432|gb|GG745511.1| GENE 418 465448 - 465918 782 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206576912|ref|YP_002236273.1| ribosomal protein S7 [Klebsiella pneumoniae 342] # 1 156 1 156 156 305 100 1e-81 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAEAIVYSALETLAQRSGKNELE AFEVALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELTDAADNKGTAVKKREDVHRMAEANKAFAHYRW >gi|289775432|gb|GG745511.1| GENE 419 466015 - 468129 1849 704 aa, chain + ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1373 97.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQYEPHRVNIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLGANPVPLQLAIGAEEGFT GVVDLVKMKAINWNDADQGVTFEYEDIPADMQDLADEWHQNLIESAAEASEELMEKYLGG EELTEEEIKKALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD DGKDTPAERHASDEEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLRGQESEVTGVKIHAEVPL SEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK >gi|289775432|gb|GG745511.1| GENE 420 468199 - 468297 76 32 aa, chain + ## HITS:1 COG:VC0362 KEGG:ns NR:ns ## COG: VC0362 COG0050 # Protein_GI_number: 15640389 # Func_class: J Translation, ribosomal structure and biogenesis # Function: GTPases - translation elongation factors # Organism: Vibrio cholerae # 1 31 1 31 394 63 96.0 7e-11 MSKEKFERTKPHVNVGTIGHVDHGKTTLTLAS >gi|289775432|gb|GG745511.1| GENE 421 468478 - 469500 1383 341 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 341 30 383 407 537 75 1e-151 AAITTVLAKTYGGSARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYV KNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLEL VEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGHLDTYIPEPERAIDK PFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKDTAKTTCTGVEMFRKLLDEG RAGENVGVLLRGIKREEIERGQVLAKPGSIKPHTKFESEVYILSKDEGGRHTPFFKGYRP QFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMD >gi|289775432|gb|GG745511.1| GENE 422 470554 - 470748 133 64 aa, chain + ## HITS:1 COG:STM3444 KEGG:ns NR:ns ## COG: STM3444 COG2906 # Protein_GI_number: 16766733 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Salmonella typhimurium LT2 # 1 64 1 64 64 109 89.0 1e-24 MYVCLCNGVSDKKIRQVVRQFQPQSFQQLRKFVPVGNQCGKCVRAAREVMEDELTTMPEF KEIA >gi|289775432|gb|GG745511.1| GENE 423 470822 - 471298 782 158 aa, chain + ## HITS:1 COG:ECs4189 KEGG:ns NR:ns ## COG: ECs4189 COG2193 # Protein_GI_number: 15833443 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 272 96.0 2e-73 MKGDVKIISYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDIEYHESIDEMKHADKYIE RILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAQNLREAIAYADSVHDYVSRDMM IEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVSD >gi|289775432|gb|GG745511.1| GENE 424 471282 - 471767 237 161 aa, chain - ## HITS:1 COG:ECs4188 KEGG:ns NR:ns ## COG: ECs4188 COG1989 # Protein_GI_number: 15833442 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli O157:H7 # 1 156 1 151 155 145 56.0 4e-35 MLAALPFLLCYSGLTLALCQQDLRYGLLPDRFTCPLLWSGLLFYLCLAPHQLNEAVWGAL AGYLSFAALYWLYRRVRGHEGLGYGDIKYLAALGAWHGWRMLPQLVLVASLLAGMTWVIL GLSARCGGNRKWEKNNPLPFGPFLAAAGFWCGWQTLANLTL >gi|289775432|gb|GG745511.1| GENE 425 472149 - 472460 514 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 [Pasteurella multocida subsp. multocida str. Pm70] # 1 103 1 103 103 202 100 2e-50 MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|289775432|gb|GG745511.1| GENE 426 472493 - 473122 1058 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 209 1 209 209 412 100 1e-113 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV TKPEAGHFAKAGVEAGRGLWEFRLADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGSDLIVKPAVKA >gi|289775432|gb|GG745511.1| GENE 427 473133 - 473738 993 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972226|ref|YP_001337372.1| 50S ribosomal protein L4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 201 1 201 201 387 100 1e-106 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEITGSGKKPW RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDANGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|289775432|gb|GG745511.1| GENE 428 473735 - 474037 491 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16762845|ref|NP_458462.1| 50S ribosomal protein L23 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 100 1 100 100 193 100 8e-48 MIREERLLKVLRAPHVSEKASTAMEKTNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNT LVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE >gi|289775432|gb|GG745511.1| GENE 429 474055 - 474876 1434 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972224|ref|YP_001337370.1| 50S ribosomal protein L2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 273 1 273 273 556 100 1e-157 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGE MRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVSPWGLQTKGKKTRSNKRTDKFIVRRRSK >gi|289775432|gb|GG745511.1| GENE 430 474893 - 475171 483 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16762847|ref|NP_458464.1| 30S ribosomal protein S19 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 92 1 92 92 190 100 7e-47 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPV FVSDEMVGHKLGEFAPTRTYRGHAADKKAKKK >gi|289775432|gb|GG745511.1| GENE 431 475186 - 475518 536 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972222|ref|YP_001337368.1| 50S ribosomal protein L22 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 110 1 110 110 211 100 5e-53 METLAQHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH NDGADIDDLKVAKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|289775432|gb|GG745511.1| GENE 432 475536 - 476234 1177 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972221|ref|YP_001337367.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 232 1 232 232 457 100 1e-127 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKGRK >gi|289775432|gb|GG745511.1| GENE 433 476247 - 476657 696 136 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146313378|ref|YP_001178452.1| 50S ribosomal protein L16 [Enterobacter sp. 638] # 1 136 1 136 136 272 100 1e-71 MLQPKRTKFRKVHKGRNRGLAQGTDVSFGTFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFGLA AAKLPIKTTFVTKTVM >gi|289775432|gb|GG745511.1| GENE 434 476657 - 476848 300 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972219|ref|YP_001337365.1| 50S ribosomal protein L29 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 63 1 63 63 120 100 1e-25 MKAKELREKSVEELNAELLNLLREQFNLRMQAASGQLQQTHLLKQVRRDVARVKTLLTQK AGA >gi|289775432|gb|GG745511.1| GENE 435 476848 - 477102 424 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972218|ref|YP_001337364.1| 30S ribosomal protein S17 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 84 1 84 84 167 98 5e-40 MTDKIRTLQGRVVSDKMEKSIVVAIERMVKHPVYGKFIKRTTKLHVHDENNECGIGDVVE IRECRPLSKTKSWTLVRVVEKAVL >gi|289775432|gb|GG745511.1| GENE 436 477268 - 477639 618 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972217|ref|YP_001337363.1| 50S ribosomal protein L14 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 123 1 123 123 242 100 2e-62 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRELRTEKFMKIISLAP EVL >gi|289775432|gb|GG745511.1| GENE 437 477650 - 477964 516 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206578576|ref|YP_002236291.1| ribosomal protein L24 [Klebsiella pneumoniae 342] # 1 104 1 104 104 203 100 1e-50 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVE KEAAIQISNLAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK >gi|289775432|gb|GG745511.1| GENE 438 477979 - 478518 911 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206579163|ref|YP_002236292.1| ribosomal protein L5 [Klebsiella pneumoniae 342] # 1 179 1 179 179 355 100 2e-96 MAKLHDYYKDEVVAKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK >gi|289775432|gb|GG745511.1| GENE 439 478533 - 478838 513 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206580075|ref|YP_002236293.1| ribosomal protein S14 [Klebsiella pneumoniae 342] # 1 101 1 101 101 202 100 2e-50 MAKQSMKAREVKRVALADKFFAKRAELKAIISDVNATDEDRWNAVLKLQTLPRDSSPSRQ RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW >gi|289775432|gb|GG745511.1| GENE 440 478872 - 479264 640 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206580677|ref|YP_002236294.1| ribosomal protein S8 [Klebsiella pneumoniae 342] # 1 130 1 130 130 251 100 4e-65 MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDIKPELE LTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|289775432|gb|GG745511.1| GENE 441 479277 - 479810 900 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206579248|ref|YP_002236295.1| ribosomal protein L6 [Klebsiella pneumoniae 342] # 1 177 1 177 177 351 100 3e-95 MSRVAKAPVVVPAGVDVKVNGQVITIKGKNGELTRTLNDAVEVKHADNALTFGPRDGYVD GWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGDVVNLALGFSHPVEHKLPAG ITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|289775432|gb|GG745511.1| GENE 442 479820 - 480173 572 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206581100|ref|YP_002236296.1| ribosomal protein L18 [Klebsiella pneumoniae 342] # 1 117 1 117 117 224 100 3e-57 MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAISE QLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF >gi|289775432|gb|GG745511.1| GENE 443 480188 - 480691 834 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 [Escherichia coli O157:H7 EDL933] # 1 167 1 167 167 325 100 1e-87 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK >gi|289775432|gb|GG745511.1| GENE 444 480695 - 480874 291 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16762861|ref|NP_458478.1| 50S ribosomal protein L30 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 59 1 59 59 116 100 1e-24 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAVRGMVNAVSFMVKVEE >gi|289775432|gb|GG745511.1| GENE 445 480878 - 481312 718 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972208|ref|YP_001337354.1| 50S ribosomal protein L15 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 144 1 144 144 281 100 4e-74 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAMITAEIRLSDLAHVEGDVVDLNALKAANIIGVQIEFAKVILSGEVTRPV TVRGLRVTKGARAAIEAAGGKIEE >gi|289775432|gb|GG745511.1| GENE 446 481320 - 482651 1243 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 12 440 16 444 447 483 56 1e-135 MAKQPGLDFQSAKGGLGELKRRLLFVVGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIVQLLTVVYQPLAELKKEGESGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISILIFAGIVAGLPPAIAHTIEQARQGDLHFLLLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATITSWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYGR >gi|289775432|gb|GG745511.1| GENE 447 482685 - 482801 198 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 [Escherichia coli O157:H7 EDL933] # 1 38 1 38 38 80 100 8e-14 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG >gi|289775432|gb|GG745511.1| GENE 448 482948 - 483304 591 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 118 1 118 118 232 99 2e-59 MARIAGINIPDHKHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAV GKFVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|289775432|gb|GG745511.1| GENE 449 483321 - 483710 667 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146313362|ref|YP_001178436.1| 30S ribosomal protein S11 [Enterobacter sp. 638] # 1 129 1 129 129 261 99 3e-68 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|289775432|gb|GG745511.1| GENE 450 483744 - 484364 1037 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 206 1 206 206 404 100 1e-111 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRMYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH KAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG TFKRQPERSDLSADINEHLIVELYSK >gi|289775432|gb|GG745511.1| GENE 451 484390 - 485379 867 329 aa, chain + ## HITS:1 COG:YPO0234 KEGG:ns NR:ns ## COG: YPO0234 COG0202 # Protein_GI_number: 16120572 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Yersinia pestis # 1 329 1 329 329 611 99.0 1e-175 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|289775432|gb|GG745511.1| GENE 452 485420 - 485806 643 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972202|ref|YP_001337348.1| 50S ribosomal protein L17 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 128 1 128 128 252 100 2e-65 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRAE PKAEAAAE >gi|289775432|gb|GG745511.1| GENE 453 485915 - 486283 315 122 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0410 NR:ns ## KEGG: Kvar_0410 # Name: not_defined # Def: DnaJ-like protein # Organism: K.variicola # Pathway: not_defined # 1 122 1 122 122 214 100.0 8e-55 MWLLDQWAERHILDAQTKGEFDNLPGSGEPLTLDDDSHVPAELRAGYRLLKNAGCLPPEL EQRREAVALADLLKGVRQDDPRHAELSKRLALLELKLRQAGLSTDFLRGEYAEALLQRMN QE >gi|289775432|gb|GG745511.1| GENE 454 486286 - 486711 516 141 aa, chain + ## HITS:1 COG:STM3412 KEGG:ns NR:ns ## COG: STM3412 COG0789 # Protein_GI_number: 16766701 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 140 1 140 141 238 89.0 2e-63 MYRIGELAKLADVTPDTIRYYEKQQMMDHDVRTEGGFRLYSDNDLQRLRFIRYARQLGFT LEAIRELLSIRIDPEHHTCQESKGIVQARLSEVEARIKELQTMRRSLQRLNDACCGTAHS SVYCSILEALEQGASNGGTGR >gi|289775432|gb|GG745511.1| GENE 455 486983 - 487396 394 137 aa, chain - ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 137 1 136 136 231 93.0 2e-61 MSFLKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVT LRDAQGDVPAVVMHYGVFIQNVFDFIIVAFAIFMAIKLMNKLNRKKEEAPAAPPAPSKEE VLLSEIRDLLKEQNNRS >gi|289775432|gb|GG745511.1| GENE 456 487537 - 488913 1095 458 aa, chain - ## HITS:1 COG:STM3409 KEGG:ns NR:ns ## COG: STM3409 COG0569 # Protein_GI_number: 16766698 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Salmonella typhimurium LT2 # 1 458 1 458 458 849 96.0 0 MKIIILGAGQVGGTLAENLVGENNDITLVDTNGDRLRSLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRAPDYVRDADKLFNSEAVPID HLIAPEQLVIDNIHRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLVGNALSTMREHMPH IDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGG GNIGAGLAHKLEKDYSVKLIERNQQRAAELAEKLQHTIVFYGDASDQELLAEEHIDQVDL FIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLS HVRKADIVGVSSLRRGVAEAIEAVAHGDESTSRVVGRSIDEIKLPPGTIIGAVVRGNDVM IANNNLRIEQGDHVIMFLTDKKFISDVERLFQPSPFFL >gi|289775432|gb|GG745511.1| GENE 457 488927 - 490222 1373 431 aa, chain - ## HITS:1 COG:ECs4154 KEGG:ns NR:ns ## COG: ECs4154 COG0144 # Protein_GI_number: 15833408 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 742 85.0 0 MKNKINLRSLAAQAIEQVVEQGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEW LINKLMARPMTGKQRTVHFLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLING VLRQFQRQQEALLVEFAEHENRYLHPKWLLKRLQQAWPQQWQEIVDANNQRPPMWLRVNR NHHSRDEWLALLKEAGLEGFTHPDYPDAVRLATPAPVHALPGFAEGWVTVQDASAQGCMR YLLPENGERILDLCAAPGGKTTHILEVAPQAQVMAVDIDEQRLSRVYDNLKRLGMKAEVK QGDGRFPEQWCGNEQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILNAT WEHLKPGGTLVYATCSILPEENSQQISAFLARTPDAELHATGTPASPGQQNLPGPEEGDG FFYAKLIKRRN >gi|289775432|gb|GG745511.1| GENE 458 490275 - 491222 594 315 aa, chain - ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 314 1 314 315 551 88.0 1e-157 MSHSLRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAGRGKKLMPSPVKVLAEAHD VPVFQPSSLRPQENQQLVADLGADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRG AAPIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGSLYDKLAGLGPQGL LTTLAQLANGTAQPEVQDESLVSYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLE IDGQPVKVWRASVIAEATHAEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSSQDL LNSRREWFIPGTRLA >gi|289775432|gb|GG745511.1| GENE 459 491237 - 491746 551 169 aa, chain - ## HITS:1 COG:STM3406 KEGG:ns NR:ns ## COG: STM3406 COG0242 # Protein_GI_number: 16766695 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Salmonella typhimurium LT2 # 1 169 1 169 169 280 94.0 9e-76 MAVLQVLHIPDERLRKVAEPVKEVNAEIQRIVDDMFDTMYAEEGIGLAATQVDIHQRIIV IDVSENREERLVLINPELLEKDGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE LEADGLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVEKLDRLRSRA >gi|289775432|gb|GG745511.1| GENE 460 491875 - 492999 421 374 aa, chain + ## HITS:1 COG:STM3405 KEGG:ns NR:ns ## COG: STM3405 COG0758 # Protein_GI_number: 16766694 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Salmonella typhimurium LT2 # 1 374 1 374 374 499 68.0 1e-141 MTPDEIWLRLMKVNNLYGDRMLDIAQRLCAAAFVDSEALHAVGMTTAQVKPFLRFDEREL DETQRWLEHPDHHLLRADDPRYPLRLRAIADYPGALLVSGDPALLHSAQLAVIGSRLHSW YGARWGKLFSETLARRGITITSGLALGIDGVAHRGALAAEGKTIAVLGNGLEQVYPRRHA NLAQQIIDNGGTLVSEFPLITPPLPAHFPRRNRIISGLSLGVLVIEAALRSGSLVTVRCA LEQGRDVFALPGPIGNPGSEGPHWLIKQGAVPVTSPEDIVEYWQNELAWLTDTSDSINNC ADQPSVALPFPELLANVGDEVTPVDVVAERAGQSVPVTVAQLLELELAGWIAAVPGGYVR LRRASHVRRTHVFV >gi|289775432|gb|GG745511.1| GENE 461 492971 - 493444 472 157 aa, chain + ## HITS:1 COG:STM3404 KEGG:ns NR:ns ## COG: STM3404 COG2922 # Protein_GI_number: 16766693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 258 92.0 4e-69 MFDVLMYLFETYIHNEAEMRVDQDKLTRDLTDAGFEREDIYNALMWLEKLADYQEGLVEP MQLASDPLSLRVYTEEECQRLDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFEL EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >gi|289775432|gb|GG745511.1| GENE 462 493471 - 494013 242 180 aa, chain + ## HITS:1 COG:STM3403 KEGG:ns NR:ns ## COG: STM3403 COG0551 # Protein_GI_number: 16766692 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 308 87.0 2e-84 MTKSALFSVRKNEPCPQCGAELVIRSGKHGPFLGCSHYPDCDYIRPLKSQADGHIVKVLE GQECPSCGAVMVLRQGRFGMFIGCSRYPECEHTELIDKPDETAIACPQCGQGHLVQRRSR FGKTFHSCDRYPDCQFVINFKPVAGECPECHYPLLIEKKMAQGLRRFCASKQCGKPIPAE >gi|289775432|gb|GG745511.1| GENE 463 494018 - 494590 366 190 aa, chain + ## HITS:1 COG:STM3402 KEGG:ns NR:ns ## COG: STM3402 COG0009 # Protein_GI_number: 16766691 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Salmonella typhimurium LT2 # 1 190 1 190 190 313 81.0 1e-85 MNNNLPSETVAHAVAVLKNEHVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL IAASFEQLKPYVDDSRLSDSQRDAIFSCWPGPVTFVFPARPETPRWLTGRFDSLAVRVTN HPLVIELCEAYGKPLVSTSANLTGQPPCRTTAEVHAQFGDSFPVVDGATGGRQNPSEIRD ALTGKLFRQG >gi|289775432|gb|GG745511.1| GENE 464 494594 - 495412 391 272 aa, chain + ## HITS:1 COG:ECs4147 KEGG:ns NR:ns ## COG: ECs4147 COG0169 # Protein_GI_number: 15833401 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli O157:H7 # 1 272 1 272 272 443 79.0 1e-124 METYAVFGNPIAHSKSPSIHQLFARQLGITHPYGRVLAPLDDFVSSLNQFFAEGGKGANV TVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLGFIKPRQ RILLVGAGGASRGVLLPLLSLGCAVTIVNRTYSRAHELATLFAHTGSVSAREMDTLSGET FDLIINATSSGIDGDVPAIPASVVHADVYCYDMFYQKGPTPFLHWCQQYGAVHCADGLGM LVAQAAHAVLLWHGVLPAIAPVIETLQQELNA >gi|289775432|gb|GG745511.1| GENE 465 495409 - 495666 226 85 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0423 NR:ns ## KEGG: Kvar_0423 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 85 1 85 85 143 98.0 2e-33 MNQAIQFPDRESWDAERQGVVFPVLVNGMQLTCAISGQSLQQRFGAEGPAQWLAAFQEHR WDLEEEVEALIRDGQEDAQGWIWLS >gi|289775432|gb|GG745511.1| GENE 466 495642 - 496196 463 184 aa, chain - ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 184 73 256 256 322 81.0 3e-88 MSAQLRPYKAFFPQIGLRVMIDASSVVIGDVRIADDVSVWPLVAIRGDVNYVSIGQRSNI QDGSVLHVTHKSSYKPEGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGVVVGD DVMIGAGSLVPQNKQLESGYLYFGNPVKQIRPLTETEREGLKYSANNYVKWKNEYLDQDN QIQP Prediction of potential genes in microbial genomes Time: Mon Jul 11 05:58:52 2011 Seq name: gi|289775105|gb|GG745512.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.5, whole genome shotgun sequence Length of sequence - 367568 bp Number of predicted genes - 326, with homology - 325 Number of transcription units - 194, operones - 64 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Op 1 40/0.000 - CDS 1477 - 2910 1579 ## COG0642 Signal transduction histidine kinase 3 2 Op 2 . - CDS 2900 - 3583 1050 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 3614 - 3673 3.9 + Prom 3568 - 3627 1.7 4 3 Op 1 3/0.369 + CDS 3726 - 5141 428 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 5 3 Op 2 3/0.369 + CDS 5159 - 5503 508 ## COG5569 Uncharacterized conserved protein 6 3 Op 3 11/0.024 + CDS 5548 - 6810 1555 ## COG0845 Membrane-fusion protein 7 3 Op 4 . + CDS 6822 - 9971 4677 ## COG3696 Putative silver efflux pump 8 3 Op 5 . + CDS 10044 - 10391 393 ## COG3326 Predicted membrane protein + Term 10529 - 10566 1.0 9 4 Tu 1 . - CDS 10401 - 10934 723 ## COG3040 Bacterial lipocalin - Prom 10959 - 11018 2.3 + Prom 10967 - 11026 3.0 10 5 Tu 1 . + CDS 11051 - 11779 834 ## COG0789 Predicted transcriptional regulators + Term 11937 - 11977 1.1 + Prom 11886 - 11945 9.7 11 6 Op 1 . + CDS 12011 - 12445 528 ## Kvar_4544 nuclear transport factor 2 12 6 Op 2 3/0.369 + CDS 12442 - 13161 318 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 13 6 Op 3 6/0.107 + CDS 13158 - 14417 1628 ## COG2907 Predicted NAD/FAD-binding protein 14 6 Op 4 4/0.321 + CDS 14419 - 15141 1037 ## COG3496 Uncharacterized conserved protein 15 6 Op 5 . + CDS 15138 - 16358 1504 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 16 6 Op 6 . + CDS 16382 - 16840 552 ## KPN_04728 hypothetical protein 17 6 Op 7 . + CDS 16837 - 17361 693 ## KPK_4917 hypothetical protein 18 6 Op 8 . + CDS 17358 - 17909 574 ## KPN_04727 hypothetical protein 19 6 Op 9 . + CDS 17906 - 18865 1252 ## COG1683 Uncharacterized conserved protein 20 7 Tu 1 . - CDS 20601 - 20819 261 ## Kvar_4553 porin LamB type - Prom 20907 - 20966 4.5 - Term 21047 - 21078 4.1 21 8 Tu 1 . - CDS 21089 - 22408 1770 ## COG2115 Xylose isomerase - Prom 22429 - 22488 2.7 22 9 Op 1 3/0.369 + CDS 22836 - 24275 1896 ## COG2211 Na+/melibiose symporter and related transporters 23 9 Op 2 . + CDS 24334 - 26013 1996 ## COG3507 Beta-xylosidase + Term 26025 - 26063 9.2 + Prom 26109 - 26168 2.0 24 10 Tu 1 . + CDS 26258 - 27127 970 ## COG3440 Predicted restriction endonuclease 25 11 Tu 1 . - CDS 27952 - 28416 16 ## gi|290512134|ref|ZP_06551501.1| predicted protein - Term 28509 - 28541 -1.0 26 12 Tu 1 . - CDS 28624 - 29664 466 ## Pat9b_0554 hypothetical protein + Prom 29628 - 29687 2.9 27 13 Tu 1 . + CDS 29814 - 29996 98 ## gi|330005394|ref|ZP_08305240.1| hypothetical protein HMPREF9538_02923 + Prom 30141 - 30200 9.0 28 14 Tu 1 . + CDS 30261 - 30935 67 ## SARI_03125 hypothetical protein + Prom 31454 - 31513 3.7 29 15 Tu 1 . + CDS 31551 - 31766 72 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 31784 - 31815 2.5 - Term 31758 - 31812 1.8 30 16 Tu 1 . - CDS 31958 - 34807 693 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 34846 - 34905 2.0 + Prom 35577 - 35636 5.1 31 17 Tu 1 . + CDS 35800 - 38187 2911 ## COG0286 Type I restriction-modification system methyltransferase subunit + Term 38238 - 38274 1.0 + Prom 38424 - 38483 5.1 32 18 Op 1 11/0.024 + CDS 38580 - 39482 144 ## COG0732 Restriction endonuclease S subunits 33 18 Op 2 . + CDS 39479 - 42727 4193 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 34 18 Op 3 5/0.202 + CDS 42756 - 44738 657 ## COG1401 GTPase subunit of restriction endonuclease 35 18 Op 4 . + CDS 44735 - 46063 226 ## COG4268 McrBC 5-methylcytosine restriction system component 36 18 Op 5 . + CDS 46114 - 46419 208 ## gi|290512145|ref|ZP_06551512.1| predicted protein 37 19 Op 1 . + CDS 46830 - 47039 230 ## t4523 bacteriophage gene regulatory protein 38 19 Op 2 . + CDS 47094 - 47621 535 ## t4522 phage polarity suppression protein + Term 47706 - 47740 6.0 + Prom 48185 - 48244 8.9 39 20 Tu 1 . + CDS 48320 - 48631 99 ## Pcar_3159 hypothetical protein + Term 48640 - 48667 0.1 + Prom 48757 - 48816 6.0 40 21 Tu 1 . + CDS 48850 - 49365 -21 ## plu3412 hypothetical protein + Prom 49777 - 49836 1.7 41 22 Tu 1 . + CDS 49881 - 50267 84 ## plu3411 hypothetical protein - Term 50259 - 50305 6.2 42 23 Tu 1 . - CDS 50412 - 51149 234 ## PROTEIN SUPPORTED gi|239523764|gb|EEQ63630.1| 30S ribosomal protein S15 - TRNA 51727 - 51811 79.1 # Leu CAA 0 0 + Prom 52215 - 52274 7.5 43 24 Tu 1 . + CDS 52406 - 52813 593 ## COG0288 Carbonic anhydrase + Prom 53158 - 53217 80.4 44 25 Op 1 . + CDS 53253 - 53498 216 ## KP1_0572 putative carbonic anhdrase 45 25 Op 2 . + CDS 53495 - 54964 2264 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Prom 54988 - 55047 2.7 46 26 Tu 1 . + CDS 55076 - 56095 1616 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 56107 - 56143 7.7 + Prom 56146 - 56205 2.5 47 27 Op 1 38/0.000 + CDS 56226 - 57110 1446 ## COG1175 ABC-type sugar transport systems, permease components 48 27 Op 2 . + CDS 57100 - 57987 1426 ## COG0395 ABC-type sugar transport system, permease component 49 27 Op 3 2/0.488 + CDS 57998 - 58822 1329 ## COG1409 Predicted phosphohydrolases 50 27 Op 4 9/0.048 + CDS 58828 - 59901 1357 ## COG3839 ABC-type sugar transport systems, ATPase components 51 27 Op 5 . + CDS 59894 - 61204 1991 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 61424 - 61459 7.1 52 28 Op 1 2/0.488 - CDS 61475 - 62374 1310 ## COG1082 Sugar phosphate isomerases/epimerases 53 28 Op 2 16/0.000 - CDS 62398 - 63282 1342 ## COG1082 Sugar phosphate isomerases/epimerases 54 28 Op 3 . - CDS 63324 - 64337 1451 ## COG0673 Predicted dehydrogenases and related proteins 55 28 Op 4 . - CDS 64384 - 66324 2863 ## COG3962 Acetolactate synthase - Prom 66406 - 66465 3.0 + Prom 66685 - 66744 4.4 56 29 Tu 1 . + CDS 66830 - 68743 2304 ## COG0524 Sugar kinases, ribokinase family + Term 68752 - 68794 6.4 + Prom 68804 - 68863 3.2 57 30 Tu 1 . + CDS 68895 - 69752 1367 ## COG1737 Transcriptional regulators + Term 69759 - 69797 -1.0 - Term 70298 - 70334 9.6 58 31 Op 1 5/0.202 - CDS 70361 - 71170 920 ## COG3718 Uncharacterized enzyme involved in inositol metabolism 59 31 Op 2 . - CDS 71189 - 72694 1949 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 72774 - 72833 3.1 60 32 Op 1 . + CDS 73047 - 73868 1204 ## COG4130 Predicted sugar epimerase + Prom 73886 - 73945 2.4 61 32 Op 2 . + CDS 73967 - 75469 2196 ## COG0433 Predicted ATPase + Term 75476 - 75509 6.1 - Term 75464 - 75497 6.1 62 33 Op 1 22/0.000 - CDS 75521 - 76603 1734 ## COG0795 Predicted permeases 63 33 Op 2 . - CDS 76603 - 77700 1427 ## COG0795 Predicted permeases - Prom 77911 - 77970 3.4 + Prom 77875 - 77934 4.1 64 34 Tu 1 . + CDS 78090 - 79601 2162 ## COG0260 Leucyl aminopeptidase + Term 79663 - 79700 -1.0 65 35 Op 1 5/0.202 + CDS 79723 - 80166 514 ## COG2927 DNA polymerase III, chi subunit 66 35 Op 2 1/0.595 + CDS 80166 - 83021 4324 ## COG0525 Valyl-tRNA synthetase + Term 83028 - 83065 10.1 + Prom 83053 - 83112 3.9 67 36 Tu 1 . + CDS 83143 - 83646 708 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 68 37 Op 1 1/0.595 - CDS 83930 - 84694 1238 ## COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 69 37 Op 2 . - CDS 84744 - 85166 649 ## COG3076 Uncharacterized protein conserved in bacteria - Prom 85283 - 85342 4.2 + Prom 85232 - 85291 5.5 70 38 Tu 1 . + CDS 85312 - 86334 1254 ## COG0078 Ornithine carbamoyltransferase + Term 86343 - 86404 1.7 - Term 86183 - 86212 -0.1 71 39 Tu 1 . - CDS 86396 - 86848 567 ## COG2731 Beta-galactosidase, beta subunit + Prom 86965 - 87024 5.5 72 40 Op 1 19/0.000 + CDS 87184 - 88119 1350 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 73 40 Op 2 6/0.107 + CDS 88133 - 88594 657 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 74 41 Tu 1 . + CDS 88747 - 89133 424 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 89157 - 89185 3.0 - Term 89145 - 89173 3.0 75 42 Tu 1 . - CDS 89206 - 91914 3994 ## COG0474 Cation transport ATPase - Prom 91964 - 92023 2.6 76 43 Tu 1 . - CDS 92050 - 92256 64 ## gi|330016508|ref|ZP_08308465.1| hypothetical protein HMPREF9538_06190 + Prom 92204 - 92263 2.1 77 44 Tu 1 . + CDS 92293 - 93240 1124 ## COG1609 Transcriptional regulators + Prom 93268 - 93327 3.7 78 45 Op 1 9/0.048 + CDS 93373 - 94791 2073 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 79 45 Op 2 . + CDS 94843 - 96498 2237 ## COG0366 Glycosidases + Term 96532 - 96572 8.1 - Term 96323 - 96372 0.3 80 46 Tu 1 . - CDS 96423 - 96614 56 ## + Prom 96647 - 96706 5.5 81 47 Tu 1 . + CDS 96884 - 99022 2836 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 99089 - 99119 -0.7 82 48 Tu 1 . + CDS 99570 - 100034 627 ## COG0602 Organic radical activating enzymes - Term 99966 - 100016 -0.3 83 49 Op 1 . - CDS 100052 - 101962 2427 ## COG3711 Transcriptional antiterminator 84 49 Op 2 . - CDS 101985 - 103139 1296 ## COG2706 3-carboxymuconate cyclase 85 50 Op 1 . - CDS 103266 - 104006 1080 ## Kvar_4609 hypothetical protein 86 50 Op 2 1/0.595 - CDS 104003 - 105121 1488 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 87 50 Op 3 . - CDS 105105 - 106238 1520 ## COG3964 Predicted amidohydrolase 88 51 Op 1 . - CDS 106352 - 106996 1147 ## KPK_5026 hypothetical protein 89 51 Op 2 . - CDS 107010 - 107786 976 ## Kvar_4613 inner membrane protein 90 51 Op 3 . - CDS 107808 - 108107 356 ## Kvar_4614 hypothetical protein 91 51 Op 4 . - CDS 108110 - 108472 482 ## Kvar_4615 hypothetical protein 92 51 Op 5 . - CDS 108483 - 108821 341 ## Kvar_4616 PRD domain protein - Prom 108932 - 108991 2.2 93 52 Op 1 2/0.488 - CDS 109111 - 109497 637 ## COG3783 Soluble cytochrome b562 94 52 Op 2 . - CDS 109534 - 110886 1634 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Prom 110903 - 110962 6.3 95 53 Tu 1 . + CDS 110982 - 111533 768 ## COG3028 Uncharacterized protein conserved in bacteria + Prom 111927 - 111986 4.8 96 54 Tu 1 . + CDS 112167 - 113375 1654 ## Kvar_4620 thioredoxin-like protein 97 55 Op 1 . - CDS 113423 - 113950 679 ## KPK_5037 acetyltransferase, GNAT family - Term 113966 - 113999 4.1 98 55 Op 2 . - CDS 114019 - 115392 1922 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 115536 - 115595 5.2 + Prom 115489 - 115548 4.8 99 56 Tu 1 . + CDS 115568 - 116566 1282 ## COG0158 Fructose-1,6-bisphosphatase 100 57 Op 1 11/0.024 - CDS 116609 - 117583 1423 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 101 57 Op 2 21/0.000 - CDS 117594 - 118619 1494 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 102 57 Op 3 16/0.000 - CDS 118630 - 120132 193 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 103 57 Op 4 . - CDS 120256 - 121212 1221 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 121256 - 121315 3.8 + Prom 121399 - 121458 3.0 104 58 Op 1 . + CDS 121616 - 122146 753 ## COG0221 Inorganic pyrophosphatase 105 58 Op 2 . + CDS 122221 - 123408 589 ## KPN_04620 hypothetical protein - Term 123509 - 123548 8.2 106 59 Op 1 6/0.107 - CDS 123553 - 123897 210 ## COG2105 Uncharacterized conserved protein 107 59 Op 2 16/0.000 - CDS 123900 - 127676 4856 ## COG2911 Uncharacterized protein conserved in bacteria 108 59 Op 3 . - CDS 127673 - 129406 2045 ## COG0729 Outer membrane protein - Prom 129521 - 129580 9.1 + Prom 129464 - 129523 3.6 109 60 Tu 1 . + CDS 129546 - 130250 767 ## COG0225 Peptide methionine sulfoxide reductase - Term 130242 - 130271 -0.3 110 61 Op 1 . - CDS 130281 - 130952 356 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 111 61 Op 2 . - CDS 131052 - 132341 921 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 132365 - 132424 4.2 - Term 132412 - 132455 5.1 112 62 Tu 1 . - CDS 132471 - 133403 1170 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 133427 - 133486 3.1 113 63 Tu 1 . + CDS 133740 - 134717 357 ## COG1609 Transcriptional regulators 114 64 Tu 1 . - CDS 134822 - 135574 531 ## Kvar_4640 oligogalacturonate-specific porin - Prom 135630 - 135689 8.4 + Prom 135935 - 135994 2.8 115 65 Tu 1 . + CDS 136095 - 137432 1884 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 137454 - 137485 4.1 116 66 Op 1 . + CDS 137633 - 138865 1168 ## COG0477 Permeases of the major facilitator superfamily 117 66 Op 2 . + CDS 138884 - 140893 2327 ## COG1874 Beta-galactosidase 118 66 Op 3 . + CDS 140924 - 141796 702 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 141806 - 141836 5.0 - Term 141794 - 141824 5.0 119 67 Tu 1 . - CDS 141858 - 142064 334 ## Z5828 hypothetical protein - Prom 142176 - 142235 3.5 + Prom 142185 - 142244 3.7 120 68 Tu 1 . + CDS 142388 - 142945 499 ## COG3054 Predicted transcriptional regulator 121 69 Tu 1 . - CDS 142935 - 143678 905 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - Prom 143715 - 143774 4.9 + Prom 143786 - 143845 5.2 122 70 Tu 1 . + CDS 143871 - 145814 2755 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 123 71 Tu 1 . - CDS 146115 - 146486 613 ## COG1733 Predicted transcriptional regulators - Prom 146530 - 146589 3.4 + Prom 146489 - 146548 2.2 124 72 Op 1 1/0.595 + CDS 146577 - 147425 1164 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 125 72 Op 2 3/0.369 + CDS 147503 - 148327 941 ## COG2207 AraC-type DNA-binding domain-containing proteins 126 72 Op 3 4/0.321 + CDS 148404 - 149375 1236 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 149377 - 149436 2.7 127 72 Op 4 . + CDS 149458 - 150120 873 ## COG2846 Regulator of cell morphogenesis and NO signaling + Term 150166 - 150194 1.4 - Term 150113 - 150146 3.6 128 73 Tu 1 . - CDS 150187 - 151590 1975 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 151773 - 151832 5.9 - Term 151772 - 151806 1.3 129 74 Tu 1 . - CDS 151896 - 152516 926 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 152696 - 152755 4.5 + Prom 152643 - 152702 3.0 130 75 Tu 1 . + CDS 152735 - 153406 547 ## COG3061 Cell envelope opacity-associated protein A + Term 153461 - 153501 5.8 - Term 153447 - 153489 6.2 131 76 Op 1 27/0.000 - CDS 153515 - 153964 720 ## PROTEIN SUPPORTED gi|206577504|ref|YP_002240846.1| ribosomal protein L9 132 76 Op 2 11/0.024 - CDS 154006 - 154233 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 - Prom 154277 - 154336 2.9 133 77 Tu 1 . - CDS 154558 - 154953 678 ## PROTEIN SUPPORTED gi|206579361|ref|YP_002240848.1| ribosomal protein S6 - Prom 155046 - 155105 3.9 + Prom 155090 - 155149 4.8 134 78 Tu 1 . + CDS 155295 - 155570 341 ## Kvar_4661 hypothetical protein + Term 155582 - 155626 6.6 + Prom 155633 - 155692 3.2 135 79 Tu 1 . + CDS 155720 - 156913 1946 ## COG0477 Permeases of the major facilitator superfamily 136 80 Op 1 8/0.048 - CDS 156979 - 157665 885 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 137 80 Op 2 9/0.048 - CDS 157665 - 158519 962 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 138 80 Op 3 8/0.048 - CDS 158529 - 159179 1014 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 139 80 Op 4 13/0.024 - CDS 159193 - 159660 673 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 140 80 Op 5 11/0.024 - CDS 159670 - 159975 361 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 141 80 Op 6 . - CDS 159988 - 161388 2023 ## COG3037 Uncharacterized protein conserved in bacteria - Prom 161460 - 161519 5.5 + Prom 161464 - 161523 4.0 142 81 Tu 1 . + CDS 161755 - 162819 1425 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Prom 162843 - 162902 2.0 143 82 Tu 1 . + CDS 162927 - 163682 908 ## COG1349 Transcriptional regulators of sugar metabolism - Term 163611 - 163667 11.2 144 83 Tu 1 . - CDS 163679 - 164395 783 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 164561 - 164620 2.6 + Prom 164387 - 164446 2.5 145 84 Tu 1 . + CDS 164605 - 164913 294 ## KPK_5085 putative biofilm stress and motility protein A + Prom 164926 - 164985 1.5 146 85 Tu 1 . + CDS 165051 - 165326 312 ## KP1_0453 hypothetical protein + Term 165526 - 165586 5.1 - Term 165267 - 165306 1.2 147 86 Tu 1 . - CDS 165317 - 166954 2226 ## COG1960 Acyl-CoA dehydrogenases - Prom 167069 - 167128 80.4 - Term 167257 - 167286 2.1 148 87 Op 1 7/0.083 - CDS 167313 - 168044 455 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 149 87 Op 2 2/0.488 - CDS 168127 - 170565 1225 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 150 87 Op 3 5/0.202 - CDS 170602 - 171069 337 ## COG1959 Predicted transcriptional regulator - Prom 171108 - 171167 2.4 - Term 171133 - 171170 5.1 151 88 Tu 1 . - CDS 171178 - 172476 1492 ## COG0104 Adenylosuccinate synthase - Prom 172500 - 172559 4.4 152 89 Tu 1 . - CDS 172579 - 172833 304 ## COG3242 Uncharacterized protein conserved in bacteria - Prom 172933 - 172992 4.3 + Prom 172890 - 172949 9.0 153 90 Tu 1 . + CDS 173000 - 173290 465 ## KP1_0445 hypothetical protein + Term 173316 - 173346 5.0 - Term 173300 - 173339 6.5 154 91 Op 1 21/0.000 - CDS 173373 - 174377 1510 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 155 91 Op 2 21/0.000 - CDS 174380 - 175015 742 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 156 91 Op 3 8/0.048 - CDS 175005 - 175640 693 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 157 91 Op 4 16/0.000 - CDS 175706 - 176986 732 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Term 176995 - 177040 3.1 158 91 Op 5 15/0.000 - CDS 177062 - 177370 272 ## COG1923 Uncharacterized host factor I protein - Prom 177392 - 177451 6.4 159 91 Op 6 12/0.024 - CDS 177463 - 178368 457 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 160 91 Op 7 10/0.036 - CDS 178406 - 180265 1791 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 161 91 Op 8 13/0.024 - CDS 180276 - 181631 1256 ## COG0860 N-acetylmuramoyl-L-alanine amidase 162 91 Op 9 6/0.107 - CDS 181648 - 182109 540 ## COG0802 Predicted ATPase or kinase 163 91 Op 10 . - CDS 182102 - 183613 1083 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 + Prom 183544 - 183603 3.4 164 92 Tu 1 . + CDS 183627 - 184766 1126 ## COG1600 Uncharacterized Fe-S protein + Term 184940 - 184973 1.5 - TRNA 185037 - 185112 93.7 # Gly GCC 0 0 - TRNA 185185 - 185260 93.7 # Gly GCC 0 0 - TRNA 185329 - 185404 93.7 # Gly GCC 0 0 + Prom 185547 - 185606 4.6 165 93 Tu 1 . + CDS 185699 - 186430 959 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 186444 - 186475 3.1 - Term 186428 - 186465 6.1 166 94 Tu 1 . - CDS 186471 - 187016 843 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 187059 - 187118 2.5 + Prom 187006 - 187065 3.8 167 95 Tu 1 . + CDS 187111 - 188172 1003 ## COG1162 Predicted GTPases + Prom 188211 - 188270 4.4 168 96 Op 1 5/0.202 + CDS 188333 - 189295 1064 ## COG0688 Phosphatidylserine decarboxylase 169 96 Op 2 . + CDS 189320 - 192649 4012 ## COG3264 Small-conductance mechanosensitive channel + Term 192657 - 192694 8.4 - Term 192609 - 192639 3.4 170 97 Tu 1 . - CDS 192687 - 194189 1994 ## COG0531 Amino acid transporters - Prom 194245 - 194304 2.9 - Term 194193 - 194229 3.0 171 98 Tu 1 . - CDS 194378 - 195355 1228 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) - Prom 195430 - 195489 4.1 + Prom 195415 - 195474 5.0 172 99 Op 1 36/0.000 + CDS 195631 - 197421 2089 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 173 99 Op 2 10/0.036 + CDS 197414 - 198148 1096 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 174 99 Op 3 10/0.036 + CDS 198159 - 198554 670 ## COG3029 Fumarate reductase subunit C 175 99 Op 4 1/0.595 + CDS 198565 - 198924 573 ## COG3080 Fumarate reductase subunit D + Term 198933 - 198976 8.4 + Prom 198957 - 199016 4.1 176 100 Tu 1 . + CDS 199038 - 199571 652 ## COG3040 Bacterial lipocalin 177 101 Tu 1 . - CDS 199568 - 199885 329 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 199957 - 200016 3.9 - Term 200485 - 200521 5.0 178 102 Tu 1 . - CDS 200539 - 201105 597 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 201149 - 201208 3.2 + Prom 201043 - 201102 3.3 179 103 Tu 1 . + CDS 201147 - 202175 1056 ## COG1509 Lysine 2,3-aminomutase - Term 202170 - 202213 7.5 180 104 Tu 1 . - CDS 202297 - 202941 90 ## COG3710 DNA-binding winged-HTH domains - Prom 202963 - 203022 3.8 + Prom 203305 - 203364 3.2 181 105 Op 1 . + CDS 203422 - 203985 510 ## KP1_0412 type 1 fimbrial protein precursor + Term 203998 - 204032 1.5 182 105 Op 2 10/0.036 + CDS 204044 - 204730 645 ## COG3121 P pilus assembly protein, chaperone PapD + Term 204814 - 204844 2.0 + Prom 204745 - 204804 3.4 183 106 Tu 1 . + CDS 204985 - 207300 1952 ## COG3188 P pilus assembly protein, porin PapC + Prom 207786 - 207845 3.6 184 107 Tu 1 . + CDS 207866 - 208327 -8 ## KP1_0409 putative fimbrial subunit protein + Term 208490 - 208516 -0.6 + Prom 208428 - 208487 2.9 185 108 Tu 1 . + CDS 208589 - 208954 311 ## KP1_0406 hypothetical protein + Term 208976 - 209002 1.0 + Prom 209565 - 209624 4.1 186 109 Tu 1 . + CDS 209659 - 210303 149 ## COG0845 Membrane-fusion protein + Prom 210317 - 210376 4.6 187 110 Op 1 . + CDS 210494 - 212419 960 ## COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 188 110 Op 2 . + CDS 212433 - 213296 491 ## KPK_5135 hypothetical protein + Term 213387 - 213428 0.4 189 111 Tu 1 . - CDS 213351 - 213704 289 ## Kvar_4717 hypothetical protein - Prom 213876 - 213935 5.9 - Term 213883 - 213950 12.0 190 112 Op 1 41/0.000 - CDS 213965 - 215611 2372 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 191 112 Op 2 . - CDS 215649 - 215942 356 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 216061 - 216120 4.6 + Prom 216007 - 216066 4.0 192 113 Tu 1 . + CDS 216175 - 217425 1368 ## COG0531 Amino acid transporters + Term 217439 - 217484 6.5 - Term 217428 - 217468 11.5 193 114 Tu 1 . - CDS 217477 - 217953 553 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 218099 - 218158 2.8 + Prom 218020 - 218079 2.2 194 115 Tu 1 . + CDS 218292 - 219728 1849 ## COG1027 Aspartate ammonia-lyase + Term 219747 - 219788 9.0 + Prom 219747 - 219806 4.4 195 116 Tu 1 . + CDS 219844 - 221145 1842 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 221154 - 221194 7.2 196 117 Op 1 7/0.083 + CDS 221271 - 221594 408 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations 197 117 Op 2 3/0.369 + CDS 221570 - 223366 1672 ## COG4232 Thiol:disulfide interchange protein 198 117 Op 3 . + CDS 223402 - 223977 782 ## COG1309 Transcriptional regulator 199 117 Op 4 . + CDS 224045 - 226132 2417 ## Kvar_4727 hypothetical protein + Term 226219 - 226257 1.5 + TRNA 226248 - 226323 84.1 # Phe GAA 0 0 - Term 226680 - 226710 3.0 200 118 Tu 1 . - CDS 226754 - 226963 222 ## Kvar_4728 PerC transcriptional activator - Prom 227157 - 227216 4.2 - Term 227123 - 227158 3.1 201 119 Tu 1 . - CDS 227356 - 227934 293 ## KPK_5150 transcriptional regulator, LuxR family - Prom 228103 - 228162 12.9 202 120 Op 1 . + CDS 228555 - 231002 2406 ## Kvar_4730 outer membrane protein PgaA 203 120 Op 2 6/0.107 + CDS 231005 - 233026 2115 ## COG0726 Predicted xylanase/chitin deacetylase 204 120 Op 3 . + CDS 233019 - 234347 1484 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 205 120 Op 4 . + CDS 234347 - 234796 478 ## Kvar_4733 biofilm PGA synthesis protein PgaD + Term 234803 - 234831 3.7 - Term 234791 - 234842 -0.9 206 121 Tu 1 . - CDS 234843 - 235628 1111 ## COG1651 Protein-disulfide isomerase + Prom 235678 - 235737 3.2 207 122 Tu 1 . + CDS 235853 - 236536 830 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Prom 236574 - 236633 2.5 208 123 Op 1 . + CDS 236682 - 237599 1187 ## COG2214 DnaJ-class molecular chaperone 209 123 Op 2 . + CDS 237599 - 237904 480 ## KPN_04508 chaperone-modulator protein CbpM - Term 238333 - 238369 -0.4 210 124 Op 1 . - CDS 238408 - 238779 354 ## Kvar_4738 plasmid stability protein, StbB 211 124 Op 2 . - CDS 238789 - 239745 1268 ## Kvar_4739 StbA family protein - Prom 239800 - 239859 4.4 - Term 239900 - 239948 5.5 212 125 Tu 1 4/0.321 - CDS 240021 - 241424 1935 ## COG2211 Na+/melibiose symporter and related transporters 213 126 Tu 1 . - CDS 241530 - 242882 1911 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 214 127 Tu 1 . + CDS 243122 - 244060 1288 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 244260 - 244304 2.0 - Term 244053 - 244090 8.2 215 128 Tu 1 . - CDS 244110 - 245612 1961 ## COG0477 Permeases of the major facilitator superfamily + Prom 246029 - 246088 4.5 216 129 Tu 1 . + CDS 246157 - 246492 403 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Prom 246560 - 246619 1.6 217 130 Tu 1 . + CDS 246721 - 247155 570 ## COG2764 Uncharacterized protein conserved in bacteria 218 131 Op 1 5/0.202 + CDS 247311 - 248036 942 ## COG2188 Transcriptional regulators 219 131 Op 2 9/0.048 + CDS 248037 - 248489 474 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 220 131 Op 3 8/0.048 + CDS 248486 - 249070 746 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 221 131 Op 4 8/0.048 + CDS 249071 - 250135 1326 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 222 131 Op 5 7/0.083 + CDS 250128 - 250976 1284 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 223 131 Op 6 7/0.083 + CDS 250943 - 251731 375 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 224 132 Op 1 6/0.107 + CDS 251839 - 252519 248 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 225 132 Op 2 7/0.083 + CDS 252516 - 253652 1245 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 226 132 Op 3 2/0.488 + CDS 253652 - 254215 595 ## COG3709 Uncharacterized component of phosphonate metabolism 227 132 Op 4 . + CDS 254231 - 254989 857 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I + Term 255073 - 255131 0.9 - Term 254920 - 254958 3.3 228 133 Op 1 . - CDS 255012 - 255365 324 ## Kvar_4756 hypothetical protein 229 133 Op 2 . - CDS 255436 - 257721 2827 ## COG0642 Signal transduction histidine kinase - Prom 257804 - 257863 3.5 + Prom 257751 - 257810 2.7 230 134 Op 1 5/0.202 + CDS 257901 - 259421 2024 ## COG1129 ABC-type sugar transport system, ATPase component 231 134 Op 2 5/0.202 + CDS 259418 - 260416 1675 ## COG4158 Predicted ABC-type sugar transport system, permease component 232 134 Op 3 8/0.048 + CDS 260447 - 261388 1395 ## COG1879 ABC-type sugar transport system, periplasmic component 233 134 Op 4 . + CDS 261463 - 262470 1134 ## COG0524 Sugar kinases, ribokinase family + Term 262644 - 262692 1.0 234 135 Op 1 . - CDS 262595 - 262813 129 ## KPK_5183 hypothetical protein 235 135 Op 2 . - CDS 262861 - 263472 165 ## KPK_5183 hypothetical protein 236 135 Op 3 . - CDS 263520 - 264278 393 ## KPK_5184 hypothetical protein - Prom 264302 - 264361 5.0 237 136 Tu 1 . - CDS 264363 - 265052 760 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 265269 - 265328 1.9 + Prom 265105 - 265164 2.8 238 137 Op 1 5/0.202 + CDS 265364 - 265783 613 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 239 137 Op 2 4/0.321 + CDS 265832 - 267511 2180 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 267539 - 267577 7.3 240 138 Tu 1 . + CDS 267947 - 268633 860 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 268634 - 268679 7.4 - Term 268628 - 268659 5.5 241 139 Tu 1 . - CDS 268668 - 269981 2011 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 270199 - 270258 6.6 + Prom 270129 - 270188 4.2 242 140 Tu 1 . + CDS 270394 - 272352 2475 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 243 141 Op 1 10/0.036 + CDS 272536 - 272847 310 ## COG3162 Predicted membrane protein 244 141 Op 2 . + CDS 272844 - 274499 2451 ## COG4147 Predicted symporter 245 142 Op 1 4/0.321 - CDS 274554 - 275657 998 ## COG3539 P pilus assembly protein, pilin FimA 246 142 Op 2 6/0.107 - CDS 275671 - 276240 317 ## COG3539 P pilus assembly protein, pilin FimA 247 142 Op 3 10/0.036 - CDS 276259 - 278838 2297 ## COG3188 P pilus assembly protein, porin PapC 248 142 Op 4 7/0.083 - CDS 278792 - 279481 419 ## COG3121 P pilus assembly protein, chaperone PapD - Term 279483 - 279516 0.6 249 142 Op 5 . - CDS 279542 - 280081 409 ## COG3539 P pilus assembly protein, pilin FimA - Term 280530 - 280577 10.8 250 143 Op 1 23/0.000 - CDS 280610 - 281287 955 ## COG1346 Putative effector of murein hydrolase 251 143 Op 2 . - CDS 281292 - 281702 444 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 281731 - 281790 5.1 + Prom 281563 - 281622 3.6 252 144 Tu 1 . + CDS 281808 - 282689 1141 ## COG0583 Transcriptional regulator + Term 282887 - 282930 -0.1 - Term 282679 - 282717 1.6 253 145 Tu 1 . - CDS 282852 - 284498 2170 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 284551 - 284610 3.7 - Term 284597 - 284628 5.5 254 146 Tu 1 . - CDS 284646 - 285995 1989 ## COG2252 Permeases - Prom 286201 - 286260 4.2 - Term 286194 - 286229 -0.9 255 147 Tu 1 . - CDS 286386 - 287054 863 ## COG0625 Glutathione S-transferase - Prom 287076 - 287135 4.7 - Term 287270 - 287308 6.1 256 148 Tu 1 . - CDS 287314 - 287772 535 ## COG0789 Predicted transcriptional regulators - Prom 287796 - 287855 3.9 + Prom 287758 - 287817 4.6 257 149 Tu 1 . + CDS 287857 - 288186 335 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 288365 - 288420 -0.6 258 150 Tu 1 . - CDS 288171 - 289775 1595 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Prom 289898 - 289957 5.4 + Prom 289994 - 290053 3.1 259 151 Tu 1 . + CDS 290284 - 290565 240 ## Kvar_4786 hypothetical protein + Term 290569 - 290610 6.4 - Term 290563 - 290591 2.3 260 152 Op 1 36/0.000 - CDS 290612 - 291469 1068 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 261 152 Op 2 . - CDS 291466 - 292299 971 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I - Term 292315 - 292349 6.5 262 153 Op 1 . - CDS 292360 - 293499 1336 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 263 153 Op 2 . - CDS 293529 - 294560 780 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 294644 - 294703 6.1 + Prom 294454 - 294513 5.1 264 154 Op 1 . + CDS 294723 - 295493 756 ## KPK_5214 metallo-beta-lactamase domain protein 265 154 Op 2 . + CDS 295490 - 296503 820 ## COG1609 Transcriptional regulators 266 154 Op 3 . + CDS 296514 - 297275 861 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 297282 - 297316 6.6 - Term 297267 - 297302 3.7 267 155 Tu 1 . - CDS 297314 - 297667 276 ## Kvar_4794 hypothetical protein - Prom 297844 - 297903 14.7 268 156 Tu 1 . - CDS 297938 - 298885 816 ## COG0583 Transcriptional regulator - Prom 298916 - 298975 3.9 + Prom 298901 - 298960 3.1 269 157 Tu 1 . + CDS 299015 - 300181 1025 ## COG3386 Gluconolactonase + Term 300190 - 300228 7.3 270 158 Tu 1 . - CDS 300221 - 302644 2119 ## COG4775 Outer membrane protein/protective antigen OMA87 - Prom 302792 - 302851 3.3 271 159 Op 1 . + CDS 303270 - 305030 1029 ## KPK_5223 tannase/feruloyl esterase family protein 272 159 Op 2 . + CDS 305064 - 305432 262 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 305656 - 305687 2.2 - Term 305638 - 305682 3.0 273 160 Tu 1 . - CDS 305696 - 307954 2538 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Prom 308304 - 308363 8.6 274 161 Tu 1 . + CDS 308543 - 310123 1537 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein + Term 310207 - 310250 7.4 - Term 310201 - 310231 4.1 275 162 Tu 1 . - CDS 310274 - 310801 578 ## COG0629 Single-stranded DNA-binding protein - Prom 310824 - 310883 3.2 + Prom 310906 - 310965 7.9 276 163 Tu 1 . + CDS 311053 - 313878 4003 ## COG0178 Excinuclease ATPase subunit + Term 313892 - 313928 7.2 - Term 313787 - 313821 -0.9 277 164 Op 1 4/0.321 - CDS 313879 - 314235 394 ## COG2315 Uncharacterized protein conserved in bacteria 278 164 Op 2 4/0.321 - CDS 314239 - 314655 474 ## COG0432 Uncharacterized conserved protein - Prom 314700 - 314759 3.8 - Term 314732 - 314764 5.0 279 165 Tu 1 . - CDS 314786 - 315499 983 ## COG3700 Acid phosphatase (class B) - Prom 315522 - 315581 3.8 - Term 315630 - 315681 12.4 280 166 Op 1 . - CDS 315693 - 316886 1638 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 316918 - 316977 2.6 281 166 Op 2 9/0.048 - CDS 317063 - 318142 1265 ## COG0787 Alanine racemase 282 166 Op 3 . - CDS 318174 - 319589 1885 ## COG0305 Replicative DNA helicase - Prom 319619 - 319678 2.7 + Prom 319547 - 319606 2.5 283 167 Tu 1 . + CDS 319759 - 320742 1191 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 320766 - 320800 4.3 - Term 320750 - 320789 4.1 284 168 Tu 1 . - CDS 320924 - 321166 363 ## KP1_0292 phage shock protein G - Prom 321199 - 321258 4.0 - Term 321238 - 321275 7.0 285 169 Tu 1 . - CDS 321306 - 322247 1455 ## COG0042 tRNA-dihydrouridine synthase - Prom 322293 - 322352 3.6 - Term 322349 - 322382 1.0 286 170 Tu 1 . - CDS 322405 - 322893 485 ## COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 322920 - 322979 4.4 287 171 Tu 1 . + CDS 323143 - 323658 549 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 323749 - 323784 2.5 - Term 323670 - 323709 0.5 288 172 Tu 1 . - CDS 323754 - 323963 333 ## COG3237 Uncharacterized protein conserved in bacteria - Prom 324064 - 324123 3.2 - Term 324165 - 324193 -1.0 289 173 Op 1 1/0.595 - CDS 324199 - 325515 1879 ## COG0534 Na+-driven multidrug efflux pump - Term 325531 - 325572 8.3 290 173 Op 2 5/0.202 - CDS 325585 - 326193 696 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 326221 - 326280 7.3 291 174 Tu 1 . - CDS 326316 - 326684 408 ## COG0818 Diacylglycerol kinase - Prom 326842 - 326901 4.1 + Prom 326625 - 326684 6.5 292 175 Tu 1 . + CDS 326813 - 329236 3462 ## COG2937 Glycerol-3-phosphate O-acyltransferase - Term 329202 - 329239 4.5 293 176 Op 1 6/0.107 - CDS 329294 - 330160 1376 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 294 176 Op 2 . - CDS 330173 - 330670 416 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) - Prom 330704 - 330763 2.8 - Term 330785 - 330818 5.4 295 177 Tu 1 . - CDS 330858 - 331781 962 ## Kvar_4822 maltose operon periplasmic 296 178 Op 1 5/0.202 - CDS 331902 - 333188 1751 ## COG4580 Maltoporin (phage lambda and maltose receptor) 297 178 Op 2 . - CDS 333277 - 334386 1273 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 334434 - 334493 1.6 298 179 Op 1 19/0.000 + CDS 334757 - 335947 1605 ## COG2182 Maltose-binding periplasmic proteins/domains 299 179 Op 2 20/0.000 + CDS 336065 - 337609 2434 ## COG1175 ABC-type sugar transport systems, permease components 300 179 Op 3 . + CDS 337766 - 338656 1432 ## COG3833 ABC-type maltose transport systems, permease component + Term 338827 - 338855 1.3 301 180 Tu 1 . - CDS 338850 - 339260 634 ## COG3223 Predicted membrane protein - Prom 339287 - 339346 2.9 + Prom 339180 - 339239 3.2 302 181 Op 1 . + CDS 339405 - 339914 571 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 303 181 Op 2 . + CDS 339923 - 340378 525 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Term 340373 - 340404 4.1 304 182 Tu 1 . - CDS 340426 - 342075 2367 ## COG0166 Glucose-6-phosphate isomerase - Prom 342108 - 342167 4.9 + Prom 342677 - 342736 1.6 305 183 Op 1 . + CDS 342840 - 344189 1928 ## COG0527 Aspartokinases + Term 344220 - 344249 1.1 + Prom 344196 - 344255 2.5 306 183 Op 2 . + CDS 344329 - 345258 1334 ## COG0385 Predicted Na+-dependent transporter + Term 345260 - 345306 9.6 - Term 345216 - 345253 -0.3 307 184 Op 1 5/0.202 - CDS 345295 - 345633 319 ## COG5606 Uncharacterized conserved small protein 308 184 Op 2 . - CDS 345630 - 345986 58 ## COG4679 Phage-related protein - Prom 346006 - 346065 2.0 + Prom 345954 - 346013 3.6 309 185 Tu 1 . + CDS 346186 - 346458 321 ## Kvar_4836 hypothetical protein - Term 346354 - 346391 -0.5 310 186 Tu 1 . - CDS 346455 - 347330 1030 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 347546 - 347605 2.9 + Prom 347570 - 347629 3.2 311 187 Op 1 2/0.488 + CDS 347674 - 348627 1300 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 348640 - 348683 5.2 312 187 Op 2 2/0.488 + CDS 348698 - 349501 195 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 313 187 Op 3 9/0.048 + CDS 349511 - 349918 488 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 314 187 Op 4 13/0.024 + CDS 349918 - 350412 470 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 315 187 Op 5 13/0.024 + CDS 350478 - 351278 1039 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 316 187 Op 6 1/0.595 + CDS 351290 - 352114 1141 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 317 187 Op 7 . + CDS 352187 - 353419 1567 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 318 187 Op 8 . + CDS 353412 - 354221 946 ## COG0169 Shikimate 5-dehydrogenase - Term 354278 - 354308 -0.5 319 188 Tu 1 . - CDS 354309 - 355940 1963 ## COG1283 Na+/phosphate symporter - Prom 355988 - 356047 3.6 - Term 356010 - 356046 8.0 320 189 Tu 1 . - CDS 356071 - 359754 5045 ## COG1410 Methionine synthase I, cobalamin-binding domain - Prom 359887 - 359946 4.4 + Prom 359838 - 359897 3.2 321 190 Tu 1 . + CDS 359949 - 360779 1064 ## COG1414 Transcriptional regulator + Term 360785 - 360811 1.0 - Term 360773 - 360799 1.0 322 191 Tu 1 . - CDS 360830 - 362614 1910 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase 323 192 Op 1 7/0.083 - CDS 362717 - 364021 1700 ## COG2224 Isocitrate lyase - Term 364030 - 364057 -0.8 324 192 Op 2 5/0.202 - CDS 364101 - 365702 2020 ## COG2225 Malate synthase - Prom 365814 - 365873 6.5 - Term 365889 - 365917 1.0 325 193 Tu 1 . - CDS 365963 - 366892 1040 ## COG1897 Homoserine trans-succinylase - Prom 367014 - 367073 3.8 + Prom 366970 - 367029 3.4 326 194 Tu 1 . + CDS 367049 - 367504 289 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases Predicted protein(s) >gi|289775105|gb|GG745512.1| GENE 1 292 - 1413 1705 373 aa, chain + ## HITS:1 COG:ycfD KEGG:ns NR:ns ## COG: ycfD COG2850 # Protein_GI_number: 16129091 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 372 4 375 376 508 65.0 1e-144 MAYQLNINWPEFLEKYWQKQPVVLKNAFPDFVDPITPDELAGLAMEPEVDSRLVSLTNGK WQASNGPFEHFDGLGETGWSLLAQAVNHWHMPAAELVRPFRVLPDWRLDDLMISFSVPGG GVGPHIDQYDVFIIQGMGSRRWRVGDKLPMRQFCPHPALLHVDPFPPIIDEDLQPGDILY IPPGFPHDGVTHETALNYSVGFRGPNGRDLISSFADYVLENDLGGEHYSDPDLTCREHPG RVEEYELERLRTMMIDMIRQPEDFKQWFGSFVTTPRHELDIAPAEPPYEEEEVVDALLGG EKLSRLSGLRVLHIGDSFFVHSEQLDTTDAEALDALCRYTSLGQEELSSGLQNPAFVSEL TRLINQGYWYFEE >gi|289775105|gb|GG745512.1| GENE 2 1477 - 2910 1579 477 aa, chain - ## HITS:1 COG:ybcZ KEGG:ns NR:ns ## COG: ybcZ COG0642 # Protein_GI_number: 16128553 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 4 476 7 479 480 626 67.0 1e-179 MAAKRPFSLATRLTFFISLATIIAFFAFTWIMIHSVKAHFEERDVHDLRQLSTTLETVLD HADYPQARRLEIMRNIIAGYANVFICLDDGQGNILFQSPDGPDLSHMLSTPGLAMQLRDG NVISWTDPQPRKMVHDNHQMETRAWRLIMLPLGKQADGKPAYHLLMALSIDFHLHYINEL KAKLISAATIISLLIIAIVLFVVYQGHKPIRQISRQIQNITSRDLDVRLDPQAVPIELER LALSFNHMLERIEDVFTRQSNFSADIAHEIRTPITNLVTQTEIALSQSRSQQELEEVLYS NLEEFSRMSRMVSDMLFLAQADNNQLIPEQQALDLADEVHKVFEFFEAWAEEKAVALRFV GSHCRVTGDPLMLRRAISNLLSNAIRYTPAGQAVTIQLSESAETIRLVVENPGTPIAVEH LPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVSAHHGSVAVQSDLRSTRFIIVLPK >gi|289775105|gb|GG745512.1| GENE 3 2900 - 3583 1050 227 aa, chain - ## HITS:1 COG:ECs0609 KEGG:ns NR:ns ## COG: ECs0609 COG0745 # Protein_GI_number: 15829863 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 417 95.0 1e-116 MKILIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTSDYDLLILDIMLPDVNGW DIVRMLRAANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA AVIVESQFQAADLSVDLVSRKVTRGATRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVW DMNFDSDTNAIDVAVKRLRAKIDNDFEPKLIQTVRGVGYMLEVPDGR >gi|289775105|gb|GG745512.1| GENE 4 3726 - 5141 428 471 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 65 469 45 456 460 169 28 1e-40 MDKSSKPSAAMRPIKLLTLSVIFALTGCLSLAPDYQRPAAPVPQQFSLSQNKLVTATAGY QETGWRTFFVDPQVKSLISTALANNRDLRMATLKVQEARAQYRVTDADRSPQLNGDGSTT YGGKLKGDTTTSSDYAAGLNLSYDLDFFGRLKNLSEADRQNFFASEEARRAVHILLIANV SQSYFNQRLAAAQLQVANDTLQNYQQSYAFVEKQLLTGSTTVLALEQARGMIESTRADIA KRQGQLAQANNALQLLLGSYQHLPDDSASSAVDLKGVTLPPSLSSAILLQRPDILEAEHS LLAANANIGAARAAFFPAITLTSSLSGSSSELSSLFNAGSAMWNFIPKIELPIFNAGRNQ ANLDLAEIRQQQQVVNYEQKIQSAFKEVADALALRQSLADQIAAQQRYLASLNITLQRAT ALYRHGAVSYIEVLSAQRDIFTTRQTLLELNYSRQANEITLFTALGGGWME >gi|289775105|gb|GG745512.1| GENE 5 5159 - 5503 508 114 aa, chain + ## HITS:1 COG:ylcC KEGG:ns NR:ns ## COG: ylcC COG5569 # Protein_GI_number: 16128556 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 112 1 107 110 112 56.0 1e-25 MNSLSKVALFTLISGAVFAVQAADPHAGMAMHEQPAAAQAQSISGKGVIKAIDMDSKKIT IAHEAIPAVNWPPMTMRFTITPQTQLNNVKNGDSVDFTFVQQGNLSLLQDIRAH >gi|289775105|gb|GG745512.1| GENE 6 5548 - 6810 1555 420 aa, chain + ## HITS:1 COG:ECs0612 KEGG:ns NR:ns ## COG: ECs0612 COG0845 # Protein_GI_number: 15829866 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 6 420 1 407 407 616 76.0 1e-176 MASLTLKNTALILGSMVIGGALTTALYARWAPTHSAAPAAEQQRKVLFWYDPMYPNTRFD KPGKSPFMDMDLVPKYADEEHAAAGASGVRIDPTQTQNLGVKTAAVTRGPLRYAQTFPAN ISYNEYQYVIMQARAAGFINKVYPLTVGDKVKQGTPLLELTIPDWVEAQSEYLLLQETGG TATQVEGILERLRLAGMPDDDIRRLKTTRKIQTRFTLKAPIDGVITAFDLRAGMNIAKDN VVAKIQGMDPVWVSVAVPESIVWLIKDASQFAIQVPAWPGKTFSINKWTLLPSVDSATRT LQLRLQVNNPDEALKPGMNAYLQLTSESEPMLLIPSKALIDSGSEQRVITVDNEGRFVPK LVHVFHESAGVTAIRSGLQEGEKVVASGLFLIDSEANIAGALERMRAQAPGTAAPAAHAH >gi|289775105|gb|GG745512.1| GENE 7 6822 - 9971 4677 1049 aa, chain + ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1047 1 1047 1047 1861 89.0 0 MIEWIIRRSVANRFLVMMGALFLSIWGTWTIVHTPVDALPDLSDVQVIIKTSYPGQAPQI VENQVTWPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK LPAGVSAEMGPDATGVGWVFEYALVDRSGKHDLAELRSLQDWFLKYELKTIPNVSEVASV GGVVKEYQIVVDPMKLTQYGISLGEVKSALDVSNQEAGGSSVELAEAEYMVRASGYLQTL DDFKNIVLKTGDNGVPVYLGDVARVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREV ISAVKAKLASLQSSLPEGVEVVTTYDRSQLIDRAIDNLSHKLLEEFIVVALVCALFLWHV RSALVAIISLPLGLCFAFIMMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE WEHQHPGEKLSNDIRWKIITEASVEVGPALFISLLIITLSFIPIFTLEGQEGKLFGPLAF TKTWSMAGAALLAIVVIPILMGFWIRGKIPAENSNPLNRFLIRIYHPLLLKVLHWPKTTL LIALLSILTVIWPLNRVGGEFLPQINEGDLLYMPSTLPGISAAQAADMLQKTDKLIMTVP EVARVFGKTGKAETATDSAPLEMVETTIQLKPQDQWRPGMTMEKIVEELDKTVRLPGLAN LWVPPIRNRIDMLSTGIKSPIGIKVSGTNLADIDAIAEQIEGVARTVPGVTSALAERLVG GRYLNIDIQREKAARYGMTVGDVQLFVSSAIGGAMVGETVEGVERYPINIRYPQSYRDSP ETLRQLPILTPLKQQIVLGDVAEVKVVTGPSMLKTENARPTSWIYIDARDRDMVSVVHDL QQAIGKEVKLKPGISVSYSGQFELLERANQKLKLMVPMTLMIIFVLLYLAFRRVGEALLI ITSVPFALVGGIWFLYWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLKN PQTFSVDKLDEALYQGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM ITAPLLSLFIIPAAYKLMWLSRHRSKRSE >gi|289775105|gb|GG745512.1| GENE 8 10044 - 10391 393 115 aa, chain + ## HITS:1 COG:STM1632 KEGG:ns NR:ns ## COG: STM1632 COG3326 # Protein_GI_number: 16764976 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 112 1 112 114 130 59.0 6e-31 MNLNLVCYSLLLLTAVGSALLPYPLAMWFLLSSLLTWLIYGADKLAARKAWRRVPETTLL VLGLAGGWPGAILGQQCFRHKTQKQPFRRWFFVSVALNVAALAGLYVVYTHLLSR >gi|289775105|gb|GG745512.1| GENE 9 10401 - 10934 723 177 aa, chain - ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 1 175 1 175 177 246 64.0 1e-65 MKLWPVVTGVAIALTLVACKSPTPPKGVQPISGFDASRYLGKWYEVARLENRFERGLEQV TATYGARSDGGISVVNRGYDPVKKRWSESDGKAYFTGAPTTAALKVSFFGPFYGGYNVIR LDDDYQYALVSGPNRDYLWILSRTPTIPAAVKQDYLNTARELGFDVDRLVWIRQTPR >gi|289775105|gb|GG745512.1| GENE 10 11051 - 11779 834 242 aa, chain + ## HITS:1 COG:STM1390 KEGG:ns NR:ns ## COG: STM1390 COG0789 # Protein_GI_number: 16764740 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 242 1 242 242 370 73.0 1e-102 MPYSIGEFARLCGINATTLRAWQRRYGLLKPLRTDGGHRQYSDDDVQQALKILDWVKKGV PVSQVKPLLSRPGARRTNNWLTLQETMLQRLKEGKIESLRQLIYDAGREYPRQELVTEVL RPLRSQVSANVPAIMTLREILDGIIIAYTSFCLEGDKKAPGDNFLITGWHLTDACEIWLE ALKRTGQGHRIDVLPVPPAALAPEIFPQRNWLLVTSGKLSAARQRQVELWQQQVVSLEVI PL >gi|289775105|gb|GG745512.1| GENE 11 12011 - 12445 528 144 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4544 NR:ns ## KEGG: Kvar_4544 # Name: not_defined # Def: nuclear transport factor 2 # Organism: K.variicola # Pathway: not_defined # 1 144 1 144 144 280 100.0 2e-74 MSTSPSVIRRFVEYYAGLDAQPPAALAALYHPDATLSDPFGQHQGLFAIQRYFTHLLANV EQCRFTIDTPLCDGQRFAVTWTMHWSHPRIAGGETLALPGCSVVDIAGEQILHQRDYYDA GEMIYEHLPLLGWAVRGVKRRVRS >gi|289775105|gb|GG745512.1| GENE 12 12442 - 13161 318 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 3 236 6 251 259 127 37 8e-28 MMTVLITGASSGIGAGLAKSFAADGHLVIACGRDASRLTAVQQFSPNISVRLFDMTDRDA CRQALTGCFADLIILCAGTCEYLDHGQVDAALVERVMATNFLGPVNCLAALQTQLEAGDR VVLVSSMAHWLPFPRAEAYGASKAALTWFANSLRLDWEPKGVAVTVVSPGFVDTPLTRKN DFAMPGRVSVDRAVTAIRHGLAKGQNHIAFPTGFSLALRLLASLPSGIQRLLLRRMVRS >gi|289775105|gb|GG745512.1| GENE 13 13158 - 14417 1628 419 aa, chain + ## HITS:1 COG:VC1120 KEGG:ns NR:ns ## COG: VC1120 COG2907 # Protein_GI_number: 15641133 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Vibrio cholerae # 1 415 2 416 426 473 54.0 1e-133 MNIAIIGSGIAGLTCAWRLAGHHQVTLFEAGATPGGHTATVDVATPQGTWAIDTGFIVYN DRTYPRFMGLLSELGIDGQKTQMSFSVHNPTSGLEYNGHSLTSLFAQRRNLLKPAFWGLL SEIVRFNRLAKLALTEALDPGATLESFLARHRFSPFFARHYILPMGAAIWSSSLQEMRRF PLPLFLRFFEHHGLLDIRDRPQWYVVPGGSREYVRALLARLGDRLDLRLNAPVQQVDRHP TGVTLRLASGEVHFDQVIFACHSAQALAMLATPTDAEREVLGDIGWQRNEVVLHSDARWL PERQRAWASWNYRLSDGDRARACVTYNMNILQGLPAGAPLFCVTLNPDAPVDDRYVWQRF VYEHPLFNPQSWSAQLRREEINGQQRSWYCGAYWYNGFHEDGVRSALDVVQGIAAAEGN >gi|289775105|gb|GG745512.1| GENE 14 14419 - 15141 1037 240 aa, chain + ## HITS:1 COG:VC1121 KEGG:ns NR:ns ## COG: VC1121 COG3496 # Protein_GI_number: 15641134 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 3 233 12 255 269 200 46.0 2e-51 MNSCLYQGVLRHRRLQPKAHHFVYRLFMAWLDLDELDRLPEAGIRRNRLAAAAWYDADYP LGAPLKAQVLNRLENLTGCRPAGRVMLLTQLRYFGFHFNPVNFYYCYDEADTLRWVLAEV RNTPWNERHYYAVDGQQARPLEKAFHVSPFNPMDMVYHWRFNAPGKTLHMHIENHQASKV FDATLALIRVPLTRANLRGLLLRLPLMTLKTVLAIYWQALRLWLKRVPLYNHPVSRSERS >gi|289775105|gb|GG745512.1| GENE 15 15138 - 16358 1504 406 aa, chain + ## HITS:1 COG:VC1122 KEGG:ns NR:ns ## COG: VC1122 COG2230 # Protein_GI_number: 15641135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Vibrio cholerae # 19 405 39 431 432 424 55.0 1e-118 MTDPVFALEPDVPRNVRLARWLLFRLLSGLREGSLTVREGAQTFHFGDPAAALRAEARVC TPEVYWRLLTGGSLAAAEAWIDGDWESHQLTALLQILARNGEVLGRLERGFRLLGKPVAR LHHWTRRNTRAQARENIAAHYDLGNEFYAHFLDDDLLYSSALFTDDQQDLTQAQRAKMAR LCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQDC VEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQDQR YRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQRF THAWQDIEKLGFDERFRRMWLYYFGYCEAGFNARTISVVQLTAERV >gi|289775105|gb|GG745512.1| GENE 16 16382 - 16840 552 152 aa, chain + ## HITS:1 COG:no KEGG:KPN_04728 NR:ns ## KEGG: KPN_04728 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 152 10 161 161 206 97.0 2e-52 MALAFDVYWTLVVMLRERGLLIWLTLAIFAWLRLPAASRPPALLLAAAGCGLDACWALAG LIDFRGDSLLPLWMVALWLMFAVVWTRLTRTATLPGWVLATAATVGGPVAYLIGARLGAM TLLVPMALAVAAMACGWLVLMLLFHLGMGRRK >gi|289775105|gb|GG745512.1| GENE 17 16837 - 17361 693 174 aa, chain + ## HITS:1 COG:no KEGG:KPK_4917 NR:ns ## KEGG: KPK_4917 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 174 1 174 174 293 99.0 2e-78 MRFALLLLWLTTLAPAAHAADWLTWRRVGEATLTWGPFTVYHSQLRTPNGRYDGPQQDRA LIITYRRDIDREALVDATRDQWQAQGILQQEPRSEAWLRMLQGIWPDVAPGSQLAFVVSG GEGQFWYRASAAQTAFTPLGPRQSAAFSTRFLAIWLDPRTTYPELRQQLIGGTP >gi|289775105|gb|GG745512.1| GENE 18 17358 - 17909 574 183 aa, chain + ## HITS:1 COG:no KEGG:KPN_04727 NR:ns ## KEGG: KPN_04727 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 183 1 183 183 330 99.0 2e-89 MKRILTLGLALLMLILAGCSTEVTEYRQQQPALDIFHYFQGRTEAWGMVQDRSGKQLRRF HVEIDGDVVGDTLTLHERFVYDDGEKQQRVWRIRRTGDNRYQGTAGDIEGVASGQAAGNA FHWRYSMNVEASGSRWLLHFDDWMFLQDGSHLFNKTEMKKFGITVATVTLFFTRTTAEER TAP >gi|289775105|gb|GG745512.1| GENE 19 17906 - 18865 1252 319 aa, chain + ## HITS:1 COG:STM1389_1 KEGG:ns NR:ns ## COG: STM1389_1 COG1683 # Protein_GI_number: 16764739 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 287 78.0 1e-77 MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASR KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGLLPILAPLTLLKHYLAEYPDRYLQ AQNYFDPYPQDLALRLTVN >gi|289775105|gb|GG745512.1| GENE 20 20601 - 20819 261 72 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4553 NR:ns ## KEGG: Kvar_4553 # Name: not_defined # Def: porin LamB type # Organism: K.variicola # Pathway: not_defined # 1 72 1 72 460 141 100.0 8e-33 MTMIKKLPLTMAVIAAFFPLTSVMAQEFTQEQIDAIVAKAVDKALADRQAKIDAAANKKV DVITNPQTTAAS >gi|289775105|gb|GG745512.1| GENE 21 21089 - 22408 1770 439 aa, chain - ## HITS:1 COG:STM3661 KEGG:ns NR:ns ## COG: STM3661 COG2115 # Protein_GI_number: 16766946 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Salmonella typhimurium LT2 # 1 438 1 438 440 794 85.0 0 MQTYFDQVDRVRFAGPKTDNLLAFRHYNPDEIVLGKRMADHLRFAACYWHNFCWNGADMF GAGSFERPWQAAGDALEMAKRKADVAFEFFYKLNVPYYCFHDVDVSPEGASLKEYLHNFA IMTEVLAEKQQQTGVKLLWGTANCFTHPRYGAGAATNPDPEVFAWAATQVVAAMNATHQL GGENYVLWGGREGYESLLNTDLRQEREQIGRFLQMVVEHKHKIGFGGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLENEIKVNIEANHATLAGHSFHHEIASAIALGIFGSVDANRG DAQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDMFYGHIGAM DVMALSLKLAARMIEDGKLDQGLAKRYAGWQGELGQKIMTGQMSLDNIARYAEQNNLNPQ PQSGHQELLENLVNTYIFG >gi|289775105|gb|GG745512.1| GENE 22 22836 - 24275 1896 479 aa, chain + ## HITS:1 COG:L0233 KEGG:ns NR:ns ## COG: L0233 COG2211 # Protein_GI_number: 15673488 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Lactococcus lactis # 4 478 9 483 490 796 83.0 0 MHSRHDEYHKLTRGERIGYGMGDFAQNLVFGTIGGFLALHMLTVNTISTATAGFIFLFVR IINVFWDPMVGTYVDKRTSKAGKYRPWLLRAGVPLVILSALLFAPIPGVKGSVAFAFIIY LALDLVYSLVNIPYGSLNASLTRDPESIDKLTSTRMMLANSANLLVYTLFPMFVQMAAPK DRSLKDTGFFGLELNLGNYTDPSANYAWFGVYAIYMIIGAVALFICYKFTKERVVATAEQ TANVKTTDLFHELRHNRPLVILGMFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGAVGLV ASIPGIAFPVFWPKLKKIFGKKGFFHLFLAMFIVGELLTYVWSREGMHDALWLAYIATFI KQWGLTSATGFMWALVPEVIAYGELKSGKRNAAIINAIMGLFFKIGFTIGGAIPLWLLAV YGFNESGAMQSASAIDGIIMTAVWIPIALAAISMVIIQAYPISDKHVTDINRQLDEIRV >gi|289775105|gb|GG745512.1| GENE 23 24334 - 26013 1996 559 aa, chain + ## HITS:1 COG:L0234 KEGG:ns NR:ns ## COG: L0234 COG3507 # Protein_GI_number: 15673487 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Lactococcus lactis # 1 557 1 557 559 935 81.0 0 MSLIQNPILRGFNADPSIIRVEDTYYIANSTFEWFPGVRLHESKDLKNWNLLPSPLSTTT LLDMKGNPSSGGIWAPALSWADGQFWLVYTDVKVTEGAFKDMTNYLTTAKDIRGPWSDPI KLNGVGFDASLFHDDDGRKYIVQQTWDHREYHHPFDGITLTELDTNTLKLMPETARTIYR GTAVALVEGPHLYKLNGYYYLFAAQGGTVFTHQEVVARSKTLEADSFETEPGDVFLTNVD TPDSYIQKQGHGALVSTPEGEWYYASLCARPWNRPGESIYDPRGWSTLGRETSIQKVYWD DEGWPRIEGGHGGKTFVEGPKDAIFTESAGDNSQQDDFTSPALDPNWNTLRVPFTAKMGT TGDGKLTLIGQGSLANTHDLSLIARRWQAFYFDATVKVKFEPFSYQQMAGLTNYYNDRHW SFVFLTWNEINGKVIEVGENNRGKYTSYLKDNAIKVPDGVEYVWFRTKVRKQTYSYEYSF DGVTFTEIPVQLDAAVLSDDYVLQSYGGFFTGAFVGLAAVDYAGYGTQAEFYQFEYQELG DRLAADGSYSWEAGETRDK >gi|289775105|gb|GG745512.1| GENE 24 26258 - 27127 970 289 aa, chain + ## HITS:1 COG:Z5892 KEGG:ns NR:ns ## COG: Z5892 COG3440 # Protein_GI_number: 15804871 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Escherichia coli O157:H7 EDL933 # 1 280 12 292 294 459 77.0 1e-129 MPSSTTLQHAIENITIWRKGEQRAPHKPLLLLYVLSQYQRGHARMFDYASEIRDELHSLL ERFGPQRRQYRPDMPFWRLKGDGFWELQNSEQCSTQGSRQPPGKELELCQVAGGFDEPHF ALLNRNKRLINTLAHQILEAHFPESIQEELAEEMGFDLQQIRKERDPYFRQQVLRAYNYE CAICGFNMRHDNTSVALEAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDEDMRI QVSPAVNGGGIVGRLFWDFDGKPITLPQGKECYPQEGFVAWHRREVFRG >gi|289775105|gb|GG745512.1| GENE 25 27952 - 28416 16 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290512134|ref|ZP_06551501.1| ## NR: gi|290512134|ref|ZP_06551501.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 154 1 154 154 255 100.0 8e-67 MVVVAKVIPYEGLVDAIMVIFTYQSADRFTHFILGEPDLEVWQSLNAYISILTNILISVP VMTVLITLCRAVKYKFIIIDLLRGLVSATLRQFAKIFSFTILFWVIFRLLPYDSVCPQQK YSTFAMAAIVSFHLFLTIACYWFIAKKITTKRIW >gi|289775105|gb|GG745512.1| GENE 26 28624 - 29664 466 346 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_0554 NR:ns ## KEGG: Pat9b_0554 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 8 346 8 349 349 410 60.0 1e-113 MKNEARKGLLALAILSAPLMAQESGVSFSHKNWEVVCDNTLTCRAAGYSPEEGKGGSVLL TRQAGAGTSVSGEVMLAELQSDGAPQPSKLTLLINDQLAGGVKPDKEGNWRLSVKQTRDI IAAVKGSGKVEFKGGPDPFVLSGEGAYAVLLKMDDVQGRIGTPGALTKKGDKPESSVQAA APAPVIYQVKPEKTQERPLTVPELAVLKPKLLATLSEDDWCDRIQPSEEQEAETISLTPL DNVHSLISALCWRAAYNEGYGYWVVDSKLAGKPELITVSGSDYGDGVIFMSQKGRGLGDC WGSASWVWDGETFRKSREATTGMCRYLHLGGTWDLPTWVTDVKPAK >gi|289775105|gb|GG745512.1| GENE 27 29814 - 29996 98 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|330005394|ref|ZP_08305240.1| ## NR: gi|330005394|ref|ZP_08305240.1| hypothetical protein HMPREF9538_02923 [Klebsiella sp. MS 92-3] hypothetical protein HMPREF9538_02923 [Klebsiella sp. MS 92-3] # 1 60 1 60 60 95 88.0 2e-18 MKRLVLALLLFIFKQLAIAPDLTPEADITLVNPSMFACGGYPRHNMMLSMCSHKPPVHES >gi|289775105|gb|GG745512.1| GENE 28 30261 - 30935 67 224 aa, chain + ## HITS:1 COG:no KEGG:SARI_03125 NR:ns ## KEGG: SARI_03125 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 224 1 224 224 400 91.0 1e-110 MADIEGIARKIYDIIISPDTVTGLINGGLSVPLDYGYLIYGIFDTDTRYERETERIRMMT AIRHDILNYENIVNAVKLIFQLFNKYLSESEQDRIYRSVVTSIVGRISTNIIASNIAKAV IEKTSFTYVVFKGKGNPIDFLSTILLFGGMAERSIRTSDKLRNEAPEVYSLLRPRDYDLL YFLFADAVQPFVDAIHAGNTEGNPVFDKIMKRVEDHLNTNAKAG >gi|289775105|gb|GG745512.1| GENE 29 31551 - 31766 72 71 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 2 71 90 163 163 75 54.0 2e-14 MYQILDAGVESEYFNIILENVKVTGITPNLFPDSGTGTHSETIQLRYEAITWKHCDGNII YKDSWNHRATA >gi|289775105|gb|GG745512.1| GENE 30 31958 - 34807 693 949 aa, chain - ## HITS:1 COG:STM4489 KEGG:ns NR:ns ## COG: STM4489 COG1112 # Protein_GI_number: 16767733 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Salmonella typhimurium LT2 # 1 949 223 1171 1171 1323 68.0 0 MYDHLLTCKKEVPLLARFASKEKPPVEPLLASNAMFSERLGHSGDKFPLAVAQRDALSHY LTQQPGDILAVNGPPGTGKTTLVLSIIATEWARAALNKTEPPVVVATSTNNQAVTNIIEA FGKDFSIGTGPMAGRWLPDVKSFGAYFPSSGRRAEAVKKYQTEAFFNGVESLEYVEDARC FFLEKARAAFPNEECHSTEQVVDLLHQRLVELSAELEQIEPAWDDLNAIRQKRHAISDDL EQYIQDKRTLLLNSTNEISLLTQGKKQWEQYRAGESIMFTLFSWLPAVRTKRHYQMKLFL EATFGERMTAFQGSQPDGIDAFIDGLIEQAHKEQAGYQQQIDHAEDISQRESEAVIRWCE ITHSLGYAGETELNLSEADELADTQLRFPAFLLATHYWEGRWLMDMAAIEDLQKENGLKG AKAIKARWLRRMKLTPCVVMTCFMLPHHMLIREHVGGKKFDDGYLYNFADLLIVDEAGQV LPEVAAASFALAKKALVIGDTEQIAPIWNSLPCIDIGNMVEEHILPEGSQEELTESYALV CESGKSAASGSVMKIAQFNSRYQYDPDLARGMYLYEHRRCFDNIIGYCNTLSYHGKLQPK RGEEKGTIFPAMGYLHIDGKGMQANGGSRYNDFEARTIAAWLAAHKEEIEHHYSKPLHEL VGIVTPFSAQVSAIKSSLLKLDINCSGDENSLTVGTVHSLQGAERAIVLFSPVYSKHEDG GFIDRDSSMLNVAVSRAKDSFLVFGDMDLFEIQPASSPRGLLSKYLFASDNNALQFEYKE RQDLNTAQTQISTLHGVEQHDVFLNQTFDAIGKSITIVSPWLTWEKLEQTGFLTSMIQAR ARGIDITVVTDKSFNTQDVSYEKRKAKQQRLNDAVEKLNALGIVTMLVNRVHSKIVIGDE GLLCIGSFNWFSASREEKYKRYDTSMVYRGESLQAEIRAIYSSLEQRKL >gi|289775105|gb|GG745512.1| GENE 31 35800 - 38187 2911 795 aa, chain + ## HITS:1 COG:CC0620 KEGG:ns NR:ns ## COG: CC0620 COG0286 # Protein_GI_number: 16124873 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Caulobacter vibrioides # 14 525 2 508 611 566 58.0 1e-161 MAAISSEGFMTNTNFSQTAAFIWSVADLLRGDFKQSQYGRVILPFTLLRRLECVLAETKD AVVAKYDELKTSPLPEDAKEKFLLRASTLSFFNTSKMDLGKMGQNDIKANLESYVQAFSP DAREIFEHFKFSEFVGLLEDANLLFKVVKKFATTDLSPKAISNYEMGLVFEELIRRFAES SNETAGEHFTPRDIVRLTTSLVFMEDDEALTQPGIIRTIYDPTAGTGGFLSSGMEYVHEL NPNAVMRAFGQELNPESYAICKADMLIKGQDVSRIKLGNTLSNDQLPLDQFDYMLSNPPF GVDWKKIEGEINDEHTQKGFNGRFGPGLPRVSDGSLLFLMHLISKMRDNHNVDGTVSNGG RIGIILNGSPLFTGGAGSGESEIRRYILEADLLEGIVALPTDMFYNTGIATYVWILSNKK APERKGKVQLIDGTNLCGKMRKSLGSKRNLMGDDDIKLITKTFGDFEVVDATTLEELGLE KAAEQKSSRGRQPATAKTEAPKTFASKIFNSTDFGYRRLTIERPLRLSAQVTDEAIATLR FAPKPFNAPMERLYDEFASQWHEENYGDFSELEAEARAIIKAEFAELKEKQIKDLLDSKL WLSQRGLMEKAQQIQTALGTQAGGKTLVSNDFNQFQLPLKGAIKTAGVKLDAKENKQFID AITTKNPDAEPVVKKVLKEAAQPLYGAFEYKGKVVEFEQDGELRDNENVPLNPTVSTSDL IENYFKAEVLPHVNDAWINADKRDAKDGEVGIVGYEIPFNRHFYVYQPPRPLSEIDADLD AVSAEIMKLLQEVHS >gi|289775105|gb|GG745512.1| GENE 32 38580 - 39482 144 300 aa, chain + ## HITS:1 COG:CC0621 KEGG:ns NR:ns ## COG: CC0621 COG0732 # Protein_GI_number: 16124874 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Caulobacter vibrioides # 18 282 174 441 450 153 39.0 5e-37 MTQEHLSNYKFSVPKAESERKKITEFLDLETAKIDNLIEKQQQLIELLKEKRQAVISHAV TKGLNPDVPMKDSGVEWLGEVPEHWEVSKFGYISLVVRGGSPRPAGDPTLFNGDYSPWVT VAEITKDNEIYLDSTDTFLTKKGSEQCRVFKAGTLLLSNSGATLGVPKILSIDANANDGV VGFELLNIDHEYAYFYLSTLTTNLRESIKQGSGQPNLNTEIVKSIAIPIPPENEIQRIVS FIKETIKLYSSIESGAMEQVKLLQERRTALISAAVTGKIDVRDWIAPDTQSIEEPQEATA >gi|289775105|gb|GG745512.1| GENE 33 39479 - 42727 4193 1082 aa, chain + ## HITS:1 COG:CC0623 KEGG:ns NR:ns ## COG: CC0623 COG0610 # Protein_GI_number: 16124876 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Caulobacter vibrioides # 3 995 1 931 964 720 42.0 0 MSMDSTKELIFQNEMIAQMIERGWVRGKTDGYDRERALYSQDALTFVQTTQPQEWEKFAK IYPTDTERHFLDALVAQLKKADINATDVLSRTYGTLGVLRHGIKSHNARFSLCQFKPEHN LNPETLSRYKQNICRIVPELVYSPHASNTAFEETGIKAKKWRIDLVLFVNGLPVATLELK SEFKQTVQNAITQYKKTRLPKDPGTNKPEPLLTFKRGALVHFAVSQYEVFMATKLDGDKT FFLPFNKGTRDGGAGNDIPEDANDYATSYLWNEVLLPDNLLKILASFVHLQIVEKENAIG LKYKSESLIFPRYHQWDVVNKLITAATVEGTGNKYLIQHSAGSGKSNSIAWTAHQLSRLY DENGEKQFHSVIVVTDRTVLDDQLQDTIYQFEHQDGVVGRINNKEGDGSKSEKLASALEN SQPIIIVTIQTFPFVLKAIENSISLKQRKYAVIADEAHSSQSGSTARQLKEVLMTEEADD DVEMSSEDILDATVAARKGSNNLNYYAFTATPKAKTLELFGRRPHPQEPASKTNKPEAFH VYSMRQAIEEGFILDVLKNYTNYKVAYKLLQKLDDPDREVDSKKAKIKLNQWVSLHDHNV SQKVKVIVEHFRKHVMHLLAGQAKAMVVTSSRKAAVRYKLAFDKYIAEQKYDKISAMVAF SGEVEFHEDDHNSLALLNQKFTEITMNPGLKGRDMRKAFDTDDYQVMLVANKFQTGFDQP KLCAMYVDKKLGGVECVQTLSRLNRTYPGKAQSGTFVLDFYNEPEDILGAFQPYYQTAEL TDVSDPQLVFELYEKLRTSGIFLWNEVEQFCEAFFSKNKSNAAISNICKPAVERWKHRYT SAIEAYVLAKEMFERTKKTGDVVLITNAENTFKDCEKEKSKLDIFKKDLGSFVRFYEFMS QIVDYDDKNLEKLSLFARHLRPLLHEQRIEEDEIDLSNVEMSHYRLSKLHEQHLKLQEDA AEYKITPGNDVGTAKPKDKKEEFLSNILARLNELFVTDNLTDKDMINYAFAVRDKLSENQ AVMTQIANNTREQAMLGDFPKAIDDAVMDSNEAQQEMMVQYLSNPELAKGFARVVFDMLK GA >gi|289775105|gb|GG745512.1| GENE 34 42756 - 44738 657 660 aa, chain + ## HITS:1 COG:DRB0143 KEGG:ns NR:ns ## COG: DRB0143 COG1401 # Protein_GI_number: 10957435 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Deinococcus radiodurans # 142 660 472 958 969 265 35.0 3e-70 MLNSLEIYQALNELGYRLESGKFEPSYASEHALGNGKYLYVKRRQDGVVNKSPLVLAPET LALKAEIDRISGIHCLWEKVKSTSYRRYPKDNGTSQYGFAADVESVEALQALVTLLGGQP AITPQTGLIRDNENKEQSLMYPLNQILFGPPGTGKTYSTTEMAVKIADNAWYQQATREHH GNDLRELVKERYKSLVEKQRIMFTTFHQSFSYEDFIEGIRATTDETSGALRYEVVDGIFK QLCLNAEVKTRGSSNQSLSLNGRRIWKMSLGNTLDGEDYIFDECLVNNYILLGWGDNLDF SGCTTAADIRLRIDEASDSLVERSEYMLTAVNMFKNIMQNGDIVIISDGNHKFRAIAEIA GDYQFLPNDERVGYHQMRKVNWLRTYSPSLPKEQLFLKALSQMTLYELRDTSIDREKLSQ LLAPVETTDNQALPHVLIIDEINRGNIARIFGELITLLEPDKRQGAEDARTLVLPYSKQL FFVPKNVYVIGTMNTADKSLIQMDLALRRRFSFTEMPARPELLAGITAYGVDAAQLLTRI NQRIEALLDSEHMIGHAYFMPLKKLDNNADREACLASIFHDKIIPLLREYFFDDYERIGW VLNDSVKAKENRFILLQQSAQLPSLSALFPKDIADSLSDRRFRINEHAFASAEAYQGIVA >gi|289775105|gb|GG745512.1| GENE 35 44735 - 46063 226 442 aa, chain + ## HITS:1 COG:YPO0388 KEGG:ns NR:ns ## COG: YPO0388 COG4268 # Protein_GI_number: 16120722 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Yersinia pestis # 5 412 9 418 438 174 30.0 3e-43 MMIQVREYALLTCDNSQPASMDLGIVSEATFSWLEQLQHKWRGSSQILSREGKRFLRLGN YVGYLQSPNGESIEILPKTTLEAPAEVVPLRQLLRRMLSASLGITPREANQAALQRSDQP LHEWIISEFLRHLADLVRKGLRFDYHLNEDEHSAFIRGQLNVTAQMRMPPGRGTRFHVRY AEFSPQRIENRLLRTALDWSLKMARQGQSWRQANSLSHQLEDILPICGSTTQLMRQWSDG KYLFGYRAIKPWCQLILEQMNPDFQLGSHQGISLLFPMEKLYEGWVGCGLAGALHHDYQL IEQTKSQYLLEHVPVGEKSSQRWFLLKPDFLITGGQTVVLDAKWKLLDSRADDSQRKYEI SQPDLYQMFAYGQKYLRGKGNMMLIYPRHQYFATSLPVFRFDEDLSLWCVPFDLETGKLV KGEWQTSFHCFPCEEAVTAHSD >gi|289775105|gb|GG745512.1| GENE 36 46114 - 46419 208 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290512145|ref|ZP_06551512.1| ## NR: gi|290512145|ref|ZP_06551512.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 101 1 101 101 186 100.0 5e-46 MIYRDFYHLMLESFSQPVELYTESRNVPFTLYVKEQKLFVRNGKDNTSRIDPKEVAAFVE RFEENGSMLAKDYQDVTFKASYLLAAMKYITLKNSLNPGNK >gi|289775105|gb|GG745512.1| GENE 37 46830 - 47039 230 69 aa, chain + ## HITS:1 COG:no KEGG:t4523 NR:ns ## KEGG: t4523 # Name: not_defined # Def: bacteriophage gene regulatory protein # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 46 1 46 79 82 86.0 4e-15 MMHCPFCKKSAHARTSRYLSENVKQRYHQCTNIECSATFHTIEAIDDGYLAPGGENAACR GAGHTPGPP >gi|289775105|gb|GG745512.1| GENE 38 47094 - 47621 535 175 aa, chain + ## HITS:1 COG:no KEGG:t4522 NR:ns ## KEGG: t4522 # Name: not_defined # Def: phage polarity suppression protein # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 172 1 172 188 212 67.0 4e-54 MTTLTLQQAFEASQNNKTAWVNRKAELAAAEQEYQEQVLAGDDRIPGRMQTLRDIIDVKK WEINQAAGRYIRSHDAVQHISIRNRLNDFMQAHGTELAATLALELMGLSQQPTLLTGHAL DRSAHYLREALSVWLSTGEEINYTSEDSDILTAIGFRPVAASRVIIRKNTPPHRA >gi|289775105|gb|GG745512.1| GENE 39 48320 - 48631 99 103 aa, chain + ## HITS:1 COG:no KEGG:Pcar_3159 NR:ns ## KEGG: Pcar_3159 # Name: not_defined # Def: hypothetical protein # Organism: P.carbinolicus # Pathway: not_defined # 2 103 3 104 104 123 53.0 2e-27 MRDKFIDAIHSCSKIQLTFYSKEDNAIITRLTAPMDFGPSRRAHDKSDRFHFWDYESDKK NHVLSLQPEAIKSLVVTVQNFHPQEFVNWTPNWFIARDWGQYS >gi|289775105|gb|GG745512.1| GENE 40 48850 - 49365 -21 171 aa, chain + ## HITS:1 COG:no KEGG:plu3412 NR:ns ## KEGG: plu3412 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 2 171 3 172 172 167 54.0 1e-40 MLNKLAKYLLTASSVAPVFFTLAFLSYISKHYKFMIAYLSLGVTILLLCVLIVKYAINHN SVTNKKLTNASPADKEITNYFLTYLFPLISGPEAFMDVRIASFFALSLFFYISFSGSYSF NPLLSFWGYKYYEAEDDTGVSFVVLSKKPLLKASNNRINLIKLTDYTYIAI >gi|289775105|gb|GG745512.1| GENE 41 49881 - 50267 84 128 aa, chain + ## HITS:1 COG:no KEGG:plu3411 NR:ns ## KEGG: plu3411 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 125 169 295 299 140 61.0 1e-32 MLRRIFDVDAYFREATNEELTTFSSHEKFSVAQGFDLTTIADSVIRKKVSLINKSRILED YSVTELRISAAEIGVVLDTENAGEFEKIKMPQIRKDVKRLLHFLDEDYFTSHITRTLYRA NSKRREDV >gi|289775105|gb|GG745512.1| GENE 42 50412 - 51149 234 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239523764|gb|EEQ63630.1| 30S ribosomal protein S15 [Helicobacter pullorum MIT 98-5489] # 1 234 146 371 397 94 27 3e-19 MLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSSTKARHYPAL PSSRFPEFLACLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKRE EIKGVRYSYRGMKMKEEHIVPLSRQAMILLEQLKQISGDKELLFPGDHDATKVMSENTVN SALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVHAAYIHTSEH LDEGD >gi|289775105|gb|GG745512.1| GENE 43 52406 - 52813 593 135 aa, chain + ## HITS:1 COG:ECs0130 KEGG:ns NR:ns ## COG: ECs0130 COG0288 # Protein_GI_number: 15829384 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli O157:H7 # 1 115 1 115 220 141 55.0 3e-34 MTTLKPLLARNRSWALQKCQHDPDYFEKWVDGQRPHSLWIGCSDSRVPAEVLTGSQPGEL FVHRNIANMLDPADDNVMSVLQYALHYLEVERVVLCGHYGCGGVQAALSLPTLPLAQESS ALARRIGQLRHTLAS >gi|289775105|gb|GG745512.1| GENE 44 53253 - 53498 216 81 aa, chain + ## HITS:1 COG:no KEGG:KP1_0572 NR:ns ## KEGG: KP1_0572 # Name: yadF # Def: putative carbonic anhdrase # Organism: K.pneumoniae_NTUH-K2044 # Pathway: Nitrogen metabolism [PATH:kpu00910] # 1 81 146 226 226 140 96.0 2e-32 MAASPGASTSASADAERSRHALDALVEANVRAQFTRLLESEPVQTVLASGRPLSLHGCVY DLASGHLTTLVEHLSPQEHAP >gi|289775105|gb|GG745512.1| GENE 45 53495 - 54964 2264 489 aa, chain + ## HITS:1 COG:RSp0113 KEGG:ns NR:ns ## COG: RSp0113 COG0659 # Protein_GI_number: 17548334 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Ralstonia solanacearum # 4 483 10 493 520 375 47.0 1e-103 MNTFRQDSLAGIVVFLVALPLCLGIAQASGLPPFVGLLTGIIGGLVVTALSPSRFAVSGP AAGLVTIVVAAIESLGSFSVFLMALVLAGVLQLLFSILRAGRFISLVPASVIKGMLAAIG ILLIMQQIPVALGTAEETGLAEVVQGNAAFSIKAIAVAAGGLLVLWLWGSPLIRRVKSLR WIPGPLIAVLLGCVTTLLLTHFAPQQLAALPRITLPAFGSLGDLLGELESPAWSAWRNPS VWMVAVTLALVASLETLLSQEALKKLRPQNPPPSPNREMVAQGVGNLLSGVLGAMPITAV IVRSSVNVSNGAQSKLSIFIHGVLLLICGLWFSGLLTLIPLASLAAVLLYTGYKLATPRL FIEQFRQGAAQYVPFLATIGGIIAFGMLAGIGIGLATQMAFSLWRSHRHSLQLARYDDHY VLRIQQNLTFMHNPHLLALLAKIPEKSVVIVEHDSVGYLDPDVQAVLDDFAENAPQRGIR LNQWPLASR >gi|289775105|gb|GG745512.1| GENE 46 55076 - 56095 1616 339 aa, chain + ## HITS:1 COG:STM4486 KEGG:ns NR:ns ## COG: STM4486 COG1064 # Protein_GI_number: 16767731 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 339 1 339 339 602 88.0 1e-172 MSIIKSYAAKEAGADLSLWEYDAGELQPEDVEVEVEYCGICHSDLSMIDNEWGMSSYPLV AGHEVIGRVAALGSAAQDKGLKIGQKVGIGWTARSCGHCDACISGNQINCLEGSVPTILN RGGFANKLRADWQWVIPLPESIDLASAGPMLCGGITVFKPLLTHHVTATSRVGVIGIGGL GHIAIKLLRAMGAEVTAFSSNPAKEQEVLAMGADRVVNSRDPEALKALAGQFDLIINTVA VDLDWQPYFEALAYGGNFHTVGAVMKPFPVPAFTLIGGDRSISGSATGNPSELRRLMKFA GRSKVAPTTELFPMSQINEALKHVREGKARYRAVLKADF >gi|289775105|gb|GG745512.1| GENE 47 56226 - 57110 1446 294 aa, chain + ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 10 289 8 289 292 151 33.0 2e-36 MRVTMRKTWLPWLILSPSLLFLLLFTWFPLGRSVYDSLFDTRMASDGAQYVGLDNFVRLF ADNVFWQSLGNNLLYILLTVVPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAA ALWLFIFMPGLGLLDHYLAKLFGPMNNNWLGRSNSALLALALIGVWKFAGYYMLFFLAGL QSIPASTREAALMEGATRTQVFFKVTLPLLRPTLSFVITTALIYSITQIDHVAVMTRGGP DNATTVLLYYIQNLAWDTHDLGKASAATFLTLAGLFAFSLINLKLLEKGAHYER >gi|289775105|gb|GG745512.1| GENE 48 57100 - 57987 1426 295 aa, chain + ## HITS:1 COG:lin0761 KEGG:ns NR:ns ## COG: lin0761 COG0395 # Protein_GI_number: 16799835 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 26 295 10 291 291 143 30.0 3e-34 MSAEISPLLVRTPAAARPLWLRLRRSSPFTLTVLMCCLALLWVSPFIWMLATSFSATTFG DDMASLLPRLPLTLDNFRDAWNSADWLSLYANTIIFTFGTFFVQLLTITTAGYVFACHEF RGKQTLFLLFLVQLMIMPVVMMVPNMLTLKTFGLLNTLTGVMMPYFTSAFGVFLMRQAFL AIPKELEEAALMEGCRWWQVLFRVLLPMSWPSVLAFATVSITYHWNEYLWPLMMLNDPDK QVLTVGLVSFAMGAESGGQWGTIGAGTLMVCLPLMLAFILFQKQFLRSFGFSGIK >gi|289775105|gb|GG745512.1| GENE 49 57998 - 58822 1329 274 aa, chain + ## HITS:1 COG:RSc1795 KEGG:ns NR:ns ## COG: RSc1795 COG1409 # Protein_GI_number: 17546514 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Ralstonia solanacearum # 1 260 1 270 282 100 29.0 3e-21 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVASGDIVNCGRPEEY QVARQILGSLNYPLYLIPGNHDDKAHFLEHLHPLCPQLGNDPQNMRYAVDDFATRLLFID SSRAGTSKGWLTDETIGWLEAQLFEGGDKPATVFMHHPPLPLGNAQMDPIACENGHRLLA LVERFPSLTRIFCGHNHSLTMTQYRQALISTIPGTVHQVPYCHEDTRPYYDLSPASCLMH RQVGDQWVSYQHSLAHYAGPWLYDENISCPTEER >gi|289775105|gb|GG745512.1| GENE 50 58828 - 59901 1357 357 aa, chain + ## HITS:1 COG:AGpA681 KEGG:ns NR:ns ## COG: AGpA681 COG3839 # Protein_GI_number: 16119690 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 346 4 356 360 326 48.0 3e-89 MLSLQNISKRFDGKPALSALSLDIHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWL HDENITATTPRERNFAMIFQNYALFPHLSVRDNITFGMKVRKEEKSSWQPRVDKVAQMLQ LEALLDRKPAKLSGGQRQRVAMARAIVRNPRLFLMDEPLSNLDARLRSEVRDSIMALHQQ LKTSTIYVTHDQTEAMSMADRIVVMNGGHVQQVGRPEYLYANPANLFVAGFIGSPAMNLL SLPCANGDVLLGEQRHPLPPRHRDQTRVWLGIRPEHITDRVEEGHLRLPATVLQRELMGA DYLLHVSTPIGTLRFSRRHRGTVPEKGESLLVGFSPADVHLFHAETQHNLLMECNHV >gi|289775105|gb|GG745512.1| GENE 51 59894 - 61204 1991 436 aa, chain + ## HITS:1 COG:YPO3796 KEGG:ns NR:ns ## COG: YPO3796 COG1653 # Protein_GI_number: 16123930 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 8 426 11 434 439 147 28.0 4e-35 MFKPFTLVAVGLSLALSGAALAKEKIDFMFPAPVDGKLTMEMTRVIKQFNDSQQDVEVRG IFTGNYDTTKIKAESAQKAGQPPALVIMSANFTTDLALKDEILPMDELFKYGDQKAGDFL QKEFWPAMHKNAQVMGTTYAIPFHNSTPILYYNKTMFDQAGIKQPPQTWAELLADAKKLT DESKGQWGIMLPSTNDDYGGWIFSALVRANGGKYFNEDYPGEVYYNSPTAIGALRFWQDL IYKDKVMPSGVLNSKQISAAFFSGKLGMAMLSTGALGFMRENSKDFELGVAMLPAKEQRA VPIGGASLVSFKGINEAQKKAAYQFLTYLVSPDVNGAWSRFTGYFSPRKASYDTPEMKAY LQQDPRAAIALEQLKYAHPWYSTWETVAVRKAMENQLAAVVNDAKVTPEAAVQAAQKEAD ALMKPYVDKTALAEVK >gi|289775105|gb|GG745512.1| GENE 52 61475 - 62374 1310 299 aa, chain - ## HITS:1 COG:STM4424 KEGG:ns NR:ns ## COG: STM4424 COG1082 # Protein_GI_number: 16767670 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Salmonella typhimurium LT2 # 3 295 10 300 306 285 48.0 7e-77 MNKDNVKLAIAPIGWTNDDMPELGSENTFQQIVSEMALAGFTGSEVGSKYPRDPAVLKPM LDIRGIQICNAWFSTFFANGQREKTIDEFVNHMNFLHAMGAKVIGCSEQSGSIQGLDKPI LGDAKPCFSEEEWQRVAEGYNTLGRLAAEKGMQVCLHHHMGTGIQTTAEIDKFMSLVDER VFLLFDTGHAWYSEGGEAPMLAILKKYLPRINHVHLKDVRPPVIDQVRRDGLSFLDGVKK GTFTVPGDGVIDFRPVFKLLDDFGYKGWMVVEAEQDPALANPFEYAVKARKYIRETAGI >gi|289775105|gb|GG745512.1| GENE 53 62398 - 63282 1342 294 aa, chain - ## HITS:1 COG:STM4436 KEGG:ns NR:ns ## COG: STM4436 COG1082 # Protein_GI_number: 16767682 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 482 76.0 1e-136 MKIAFDVDVIKDLGITRMVHQVAEWGYKYIEQSPHPQINPFYKHPRASREIMAEYKQALR DTGLELSSFICVYRWSGPDELRRQAAVKNWKRLVEIAVEMGVQVINTEFSGDPNQPEICD EMFYRSMEELLPIFEREGIRVEIQAHPWDFCEENNETVDIVKSFRSDNVKYVYSVPHTFF YDKGVGDVASMLRYVGSDLSHVLIADTRNHTKHCRYIVNPPGVDAVVHQHVGVGEGDVDF DALFRTLREMKFAEQTFKVGGEPIVATSLFGYPEKMKYQAVETRELIERELLRR >gi|289775105|gb|GG745512.1| GENE 54 63324 - 64337 1451 337 aa, chain - ## HITS:1 COG:RSc1246 KEGG:ns NR:ns ## COG: RSc1246 COG0673 # Protein_GI_number: 17545965 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Ralstonia solanacearum # 1 336 1 336 337 439 66.0 1e-123 MSLKLGVIGAGAIGKEHIRRCTQVLQGATVVAVSDINADNARAAVALPGVQAEVYADGHD VINASDVDAILVTSWDPTHEEYTLAAIAAGKPVFCEKPLAMSAEGCRRIVDAEMKAGRRL VQVGFMRPYDEGYLALKKVIDDGDIGAPLMLRCAHRNQSVGENYTTDMAITNTLIHELDV LRWLLNDDYRSVQVRFPRSTSHTHARLKDPQIVSFETKKGTLIDVEVFVNCQYGYDIQCE VVGETGIARLPEPSAVQMRKSASLSTAILTDWKDRFIKAYDVELQAFINDVKAGQLHGPS AWDGYAASVAADACIKAQGTSEPVEVTLPECPAFYKR >gi|289775105|gb|GG745512.1| GENE 55 64384 - 66324 2863 646 aa, chain - ## HITS:1 COG:YPO2578 KEGG:ns NR:ns ## COG: YPO2578 COG3962 # Protein_GI_number: 16122793 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase # Organism: Yersinia pestis # 1 646 8 648 648 752 59.0 0 MGKLRLTTAQALVKFLDNQYLEVDGVELKFVKGIFAIFGHGNVLGLGQALEQDSGDMRVY QGRNEQGMAHAATGFARQALRRQIIACTSSIGPGAANMITAAGTASANRIPLLLLPGDVF ATRQPDPVLQQIEQSYDLSISTNDAFRAVSKYWDRITRPEQLMSACINAMRVLTDPAETG AVTLCLPQDVQGEAWDYPESFFARRVHRLDRRPASAAQLADAVAAIKASRKPLIVCGGGV KYSGAGEALSRFAERYGVPFAETQAGKGTVVSSHPLNVGGVGETGCLAANLLAKEADLVI GVGTRFSDFTTASKWIFQHPEVRFLNINVSNFDAWKLDGIAMLADAREAMTALDAGLADS GWQAGWGAQIESVQSRQLKETQRVYQAVWQEKSFVPEIDDHLDRESVYREFRQITDSTLT QSSVLGVLNETLPAEAVIVAAAGSLPGDLQRVWRNRAENTYHVEYGYSCMGYEVNAALGV KLAQPQSEVYSLVGDGSFMMLHSELVTSLQERAKINVVLFDNMANGCINNLQMEHGMDSF GTEFRYRQPETGQLQGGLVPVDFATIAAGYGCKTWRVTTLDELRHALDAARRETVSTLID IKVLPKTMVHKYGSWWNVGVAQTALSERIRKVAQMINEKRAQARDY >gi|289775105|gb|GG745512.1| GENE 56 66830 - 68743 2304 637 aa, chain + ## HITS:1 COG:YPO2585_1 KEGG:ns NR:ns ## COG: YPO2585_1 COG0524 # Protein_GI_number: 16122798 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 6 338 25 357 357 526 74.0 1e-149 MNAAVKRLDVICIGRVAVDLYAQQIGSRLEDVASFAKYLGGSSGNVAFGTAIQGLKSAML ARVGDEHNGRFLRETLNRAGVDTEYLITDKSRLTALVMLGIKDQETFPLIFYRDNCADMA LTPDDISEEYIASSRALAVTGTHLSHANTRAAVLKALEYARRHGLRTALDIDYRPVLWGL TSLGDGETRFIESGPVTSQLQEVLHLFDLVVGTEEEFHIAGGSTDTLTALKNVRNATKAT LVCKRGPMGCVVLEGDIPDSWDQVPLQQGVRVEVLNVLGAGDAFMSGLLRGWLNDEGWEQ ACRYANACGALVVSRHGCAPAMPTKVELDDYLLRAESVPRPDVDERLNHLHRVTSRRQQW PELCIFAFDHRKQLADLARETGRDEACIPQLKLLLLAAAEAAAQEAGLDQRSGILADGTY GQRALNAITGKGWWIGRPIELPSSRPLRLEHGNIGSQLIDWPLEHVVKCLVFYHPADPAA LREEQDSLLLEVWQACNKSGHELLLEVILPENGPDKDERHYHTMLEHFYQLGIKPDWWKL PPLSSASWQQITALIEREDPWSRGILILGLDAPSDKLRAGFAEAAAHPMIKGFAVGRTIF GQPSRRWMQGELSDEALIEEVKRNYLTLIGYWREARR >gi|289775105|gb|GG745512.1| GENE 57 68895 - 69752 1367 285 aa, chain + ## HITS:1 COG:STM4417 KEGG:ns NR:ns ## COG: STM4417 COG1737 # Protein_GI_number: 16767663 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 273 1 274 277 405 78.0 1e-113 MANNPTQLTILQDEIRRRYDTLSKRLKQVARYILDNSNSVAFDTVASIAQQADVPPSTLI RFANAFGFSGFNEMKQMFKQHLMEETANYTERARLFRQTTSDESSPPETPTEILNMFTMV NNQALQQLAMQTSSDELERAVALLGEAENIYVIGLRRSFSVASYLTYALRHLDRKAFLID GLGGMFTEQLSLVGPKDVVVAVSFSPYAREVVELVELGAQRKARQIAITDSQVSPLAAFS DVCFVVREAQVDGFRSQVASLCLAQTLAVSLALNSSQESEAKQKA >gi|289775105|gb|GG745512.1| GENE 58 70361 - 71170 920 269 aa, chain - ## HITS:1 COG:STM4420 KEGG:ns NR:ns ## COG: STM4420 COG3718 # Protein_GI_number: 16767666 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzyme involved in inositol metabolism # Organism: Salmonella typhimurium LT2 # 7 267 9 269 269 402 72.0 1e-112 MSLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVK TQHADFPNLGKRMSPFERTPPWSVYVPPQDKVEVTADSDLELAVCSAPGKGRFPARLIRP EDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEGATSSWPSHKHDTAQPGKETQ LEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLN VMAGPDRKWLFTWEDDHAWINTPEYPRHD >gi|289775105|gb|GG745512.1| GENE 59 71189 - 72694 1949 501 aa, chain - ## HITS:1 COG:STM4421 KEGG:ns NR:ns ## COG: STM4421 COG1012 # Protein_GI_number: 16767667 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 501 1 501 501 811 78.0 0 MTITGNFIGGKTVISSSNETMPVYDPATGKAVREVTVSTAQEVSEAIQVARDAFDSWSRT TPLRRARVLFNFKMLLEQHVEELAGIIVSEHGKVWSDALGELTRGMEVVEFACGIPHLIK GEYSSDVGTGVDSYSLMQPLGVVAGITPFNFPAMVPMWMFPLALACGNSFVLKPPALAPT AAVRLAELLKEAGLPDGVFNVVHCSNEDAEQLYTDPRIAAVSFVGSSGVAEYIYKTASAH GKRVQAFGAAKNHAIVMPDADLDATVNAIMGGAFGSAGERCMALPVVVAVGDETADKLIA RLKPLVEALKVGPGCMRGQEENEMGPVVSDTHQKKVLGYIDKGESEGAKLVVDGRKLRVP GYDAGYYVGGTLFDHVTPEMTIWREEIFGPVLGIVRAADYDSALELVNSHEFGNGSAVFT SNGHTAREFVHDVQAGMVGVNVPVPVPMAFHSFGGWKRSVFGALNVHGPDGVRFYTRMKT ATVRWPAGQQTVSEFSMPTLG >gi|289775105|gb|GG745512.1| GENE 60 73047 - 73868 1204 273 aa, chain + ## HITS:1 COG:STM4435 KEGG:ns NR:ns ## COG: STM4435 COG4130 # Protein_GI_number: 16767681 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar epimerase # Organism: Salmonella typhimurium LT2 # 1 268 1 269 271 335 62.0 4e-92 MAIAMQRFCINRKIAPALSIEAFFRLVNRLGLNKVELRNDLPSGKVTDDLSHQQVRELAA RYHIEILTINAVYPFNRRSEEVRQLTESLLKEAQAIGAKSLVLCPLNDGSEVPASETLSA LRDLAPLFAFYGIHGLVEPLGFPQSSLRSALQAQTLIHDARVPFKLLIDTFHHHLYPQAA DEFSQVEVADIGLVHLSGVDDTRPSEQLTDAERIMLTPQDRLGTCEQVKALEARGYQGVY AFEPFAPELAQWSEADIEREIEQSIALIQRHCA >gi|289775105|gb|GG745512.1| GENE 61 73967 - 75469 2196 500 aa, chain + ## HITS:1 COG:yjgR KEGG:ns NR:ns ## COG: yjgR COG0433 # Protein_GI_number: 16132085 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 500 1 500 500 853 88.0 0 MSSPLLIARTLDNALYLLPAMANRHGLITGATGTGKTVTLQKLAESFSEIGVPVFMADVK GDLTGIAAAGQSSEKLQARLEKIGVSDWEPHANPVVLWDIFGEKGHPVRATVSDLGPLLL ARLLNLNEVQSGVLNIIFRIADDRGLLLLDFKDLRAITQFIGDNAKAFQNQYGNISSASI GAIQRGLLTLEQQGAEHFFGEPMLDIADWMRVDASGKGVINILSAEKLYQMPKLYAASLL WMLSELYERLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVYFV SQNPADIPDAVLGQLGNRVQHALRAFTPKDQKAVKTAAQTMRANPAFSTEQAIQELGTGE ALISFLDEKGSPSVVERAMVIAPCSRMGPVSDDERNGLLNHSPLYGKYEEEVDRESAFEM LQQGVQVATGQQSAPPAKGQQSGDDDGLLGGLKDILFGSTGPRGGKRDGIVQTAAKSAVR QVTNQIVRGMLGSLLGGRKR >gi|289775105|gb|GG745512.1| GENE 62 75521 - 76603 1734 360 aa, chain - ## HITS:1 COG:ECs5239 KEGG:ns NR:ns ## COG: ECs5239 COG0795 # Protein_GI_number: 15834493 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 360 2 361 361 619 92.0 1e-177 MQAFGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSV PKDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAI GEWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAF NPERRLESVRYAASAKFDSENKVWRLSQVDESNLTDPKQVTGSQMVSGTWKTNLTPDKLG VVALDPDALSISGLHNYVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL RSVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRKA >gi|289775105|gb|GG745512.1| GENE 63 76603 - 77700 1427 365 aa, chain - ## HITS:1 COG:STM4479 KEGG:ns NR:ns ## COG: STM4479 COG0795 # Protein_GI_number: 16767724 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 364 1 365 366 574 87.0 1e-163 MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMA QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWA GPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPK GNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVS ADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSML PAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARF NKGAA >gi|289775105|gb|GG745512.1| GENE 64 78090 - 79601 2162 503 aa, chain + ## HITS:1 COG:STM4477 KEGG:ns NR:ns ## COG: STM4477 COG0260 # Protein_GI_number: 16767722 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 503 1 503 503 992 98.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL LLHHVPNILSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAAYLASQARQLADTYSKNVITRVIGEQQMRELGMNSYLAVG NGSQNESLMSVIEYKGNPSEDARPIVLVGKGLTFDSGGISIKPAEGMDEMKYDMCGAAAV YGVMRMVAELQLPLNVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC DVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMSNHNPLAHELIGASELAGDRAWRL PLADEFQDQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKG ATGRPVALLSQFLLNRAGFNGEE >gi|289775105|gb|GG745512.1| GENE 65 79723 - 80166 514 147 aa, chain + ## HITS:1 COG:STM4476 KEGG:ns NR:ns ## COG: STM4476 COG2927 # Protein_GI_number: 16767721 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Salmonella typhimurium LT2 # 1 147 14 160 160 272 91.0 1e-73 MKNATFYLLDNENTVEGLSAVEQLVCDIAAERWRNGKRVLIACEDEQQAIRLDEALWSRP PESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRLNFADFATAFTEVIDFVPYE ENLKQLARERYKAYRMAGFNLNTATWK >gi|289775105|gb|GG745512.1| GENE 66 80166 - 83021 4324 951 aa, chain + ## HITS:1 COG:STM4475 KEGG:ns NR:ns ## COG: STM4475 COG0525 # Protein_GI_number: 16767720 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 951 1 951 951 1876 96.0 0 MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKAE SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKFVVLPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGRRHQLPMINI LTFDGDIRESAEVYDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI QDWCISRQLWWGHRIPAWYDNDGNVYVGRSEDEVRQENKLGTDVALRQDEDVLDTWFSSA LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKT VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLAEKIRKRTEK QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQD CGFNGGEMVLSLADRWILAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELT KPVMNGGSEAELRGTRHTLVIVLEGLLRLAHPIIPFITETIWQRVKAICGITADTIMLQP FPQYDASQVDDAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSKEAERRVNDN RSFLLNLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIE GEIGRIESKLSNEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL >gi|289775105|gb|GG745512.1| GENE 67 83143 - 83646 708 167 aa, chain + ## HITS:1 COG:STM4473 KEGG:ns NR:ns ## COG: STM4473 COG0454 # Protein_GI_number: 16767718 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 267 82.0 6e-72 MNTSVPAATLLRRITAADNAAIARVIRQVSAEYGLTADKGYTVADPNLDELYELYSQPGS AYWVVEKEGEVVGGGGVAPLACSEPDICELQKMYFMTSARGQGLAKKLALLALDYAREQG FKRCYLETTAFLTEAIGLYEHLGFEHIDGPLGCTGHVDCEVRMLKTL >gi|289775105|gb|GG745512.1| GENE 68 83930 - 84694 1238 254 aa, chain - ## HITS:1 COG:STM4471 KEGG:ns NR:ns ## COG: STM4471 COG4445 # Protein_GI_number: 16767716 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA # Organism: Salmonella typhimurium LT2 # 1 254 17 270 270 413 78.0 1e-115 MDYPQILSPIINFLHCPTPQAWIDEARKPENLPLLLTDHMVCELKAAQNAMLLVRRYVAD KADADELLACLKPYEDFTYRWGPEPDFVALHKRINKSAMPQTDDPWGRQLLDSMILLIKE ELHHFWQVREMMLARDIPYVKITASNYARGMRREVRSHEPVMLIDKLICGAYIEARSCER FAALAPWLDDDLQKFYLSLLRSEARHYQDYLDLAQKIAGDDISERVRQLGEAEAALILRP EAEFRFHSGVPVAA >gi|289775105|gb|GG745512.1| GENE 69 84744 - 85166 649 140 aa, chain - ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 1 120 138 176 93.0 2e-44 MANPEHLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFETLEKVAVEAFKLGYEV TEPEELEVEEGDMVICCDILSECALNADLIDAQVEQLMTLAEKYDVEYDGWGTYYEDPNG EEDGDDDEDFVDEDDDGVRH >gi|289775105|gb|GG745512.1| GENE 70 85312 - 86334 1254 340 aa, chain + ## HITS:1 COG:ECs5231 KEGG:ns NR:ns ## COG: ECs5231 COG0078 # Protein_GI_number: 15834485 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 7 340 1 334 334 610 89.0 1e-174 MPGEGTMSAFYQKHFLKLLDFTPAEITALLELAAKLKADKKNGIEVQKLAGKNIALIFEK DSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVV ETLAQYAGVPVWNGLTNEFHPTQLLADLLTMKEHLPGKAFNQMTLVYAGDARNNMGNSML EAAALTGLDLRLVAPSACWPEAALVESCTALAKQQGGNITLTEVIAAGVKGADFIYTDVW VSMGEAKEKWAERIALLRDYQVNSAMLALTGNPQVKFLHCLPAFHDDQTTLGKQMAADYG LHGGMEVTDEVFESAASVVFDQAENRMHTIKAVMVATLSK >gi|289775105|gb|GG745512.1| GENE 71 86396 - 86848 567 150 aa, chain - ## HITS:1 COG:ECs5229 KEGG:ns NR:ns ## COG: ECs5229 COG2731 # Protein_GI_number: 15834483 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli O157:H7 # 1 150 4 153 153 254 83.0 5e-68 MIIGNIHHLQPWLPAALREAIEHVIAHVSEATPLGKHDIDGNNLFYLISEDTTEPQAARR AEYHARYLDIQIVLRGIEGMTFSTLPAGEPQTDWLAEKDIAFLAEGQQEKTVILNEGDFV VFYPGEVHKPLCAVGAPAKVRKAVVKMLMA >gi|289775105|gb|GG745512.1| GENE 72 87184 - 88119 1350 311 aa, chain + ## HITS:1 COG:STM4460 KEGG:ns NR:ns ## COG: STM4460 COG0540 # Protein_GI_number: 16767705 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Salmonella typhimurium LT2 # 1 311 1 311 311 587 94.0 1e-168 MANPLYQKHIISINDLSREDLELVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSF ETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFS GGVPVLNAGDGANQHPTQTLLDLFTIQETQGRLENLNVAMVGDLKYGRTVHSLTQALAKF SGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSAIDDVMAEVDILYMTRVQKERLDPSE YANVKAQFVLRAADLEGARANMKVLHPLPRIDEITTDVDKTPHAWYFQQAGNGIFARQAL LALVLNSELAL >gi|289775105|gb|GG745512.1| GENE 73 88133 - 88594 657 153 aa, chain + ## HITS:1 COG:STM4459 KEGG:ns NR:ns ## COG: STM4459 COG1781 # Protein_GI_number: 16767704 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Salmonella typhimurium LT2 # 1 153 1 153 153 290 93.0 5e-79 MTHDNKLQVEAIKRGTVIDHIPAQVGFKLLTLFKLTETDQRITIGLNLPSGEMGRKDLIK IENTFLTDEQVNQLSLYAPQATVNRIDDYEVVGKSRPSLPDRIDSVLVCPNSNCISHAEP VSSSFAVKKRADDIALKCKYCEKEFSHYVVLAN >gi|289775105|gb|GG745512.1| GENE 74 88747 - 89133 424 128 aa, chain + ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 218 94.0 2e-57 MSKTIATENAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGSVPEDVSAQARQSLNNVKAI VEAAGLTVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIE IEAIAVRR >gi|289775105|gb|GG745512.1| GENE 75 89206 - 91914 3994 902 aa, chain - ## HITS:1 COG:ECs5219 KEGG:ns NR:ns ## COG: ECs5219 COG0474 # Protein_GI_number: 15834473 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 7 902 3 898 898 1600 86.0 0 MLKNYTRQLFAQLSRHLPRRLVQRDPLPDARNLTSVPIPDSLGKRCLDVAAMDDQEIWRA FDSHPEGLNEGEVAAKILKHGDNQIPAQKPSPWWVHLWTCYRNPFNLLLTVLGIVSYSTE DLFAAGVIALMVGISTLLNFIQEARSTKAADALKAMVSNTATVLRVVNEQGESRWLELPI DQLVPGDIVKLSAGDMIPADLRIIQARDLFVAQASLTGESLPVEKVARSRDPLQQNPLEC DTLCFMGTNVVSGSAQAIVYATGGNTWFGQLAGRVSEQESEPNAFQKGISRVSMLLIRFM LVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK HLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDVSGKSSERVLHTAWLNSHYQTGLKNL LDTAVLEGVELEAARGLAERWQKVDEIPFDFERRRMSVVVKEQGDAHQLICKGALQEILN VSTQVRYNGEIVPLDDTMLRRIRRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLI LEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSQI EAMSDDELAALAKRTTLFARLAPLHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGI SVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVA SAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIRKPQRWNPADLGRFMVFFGPIS SIFDILTFGLMWWVFHANTVEMQTLFQSGWFIEGLLSQTLIVHMIRTRRIPFVQSRAAWP LFAMTLVVMAVGIALPFSPLAGYLQLQALPLSYFPWLVVILAGYMVLTQTVKGFYSRRYG WQ >gi|289775105|gb|GG745512.1| GENE 76 92050 - 92256 64 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|330016508|ref|ZP_08308465.1| ## NR: gi|330016508|ref|ZP_08308465.1| hypothetical protein HMPREF9538_06190 [Klebsiella sp. MS 92-3] hypothetical protein HMPREF9538_06190 [Klebsiella sp. MS 92-3] # 1 53 1 53 65 85 81.0 1e-15 MLLNQTAMSKVWFTFGLVARAYHRHKCHTCLNERAIIRAVYIHLPENLWTPIPLLILDGA TFLSGKPV >gi|289775105|gb|GG745512.1| GENE 77 92293 - 93240 1124 315 aa, chain + ## HITS:1 COG:STM4455 KEGG:ns NR:ns ## COG: STM4455 COG1609 # Protein_GI_number: 16767700 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 314 1 314 315 525 83.0 1e-149 MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMQQHGFSPSRSARAMRGQ SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPGLVEEHLGMLARRNID GVVLFGFTGIDEAMLAPWRDTLVLMARDAPGFASVCYDDEGAITLLMQRLYDRGHRHISF LGVPHSDVTTGERRHLAYLAFCKKHRLTPTAALPGLGMKQGYDTVASVLTAETSALVCAT DTLALGASKYLQQQGRAALQLASVGSTPLMKFLHPEILTVDPGYAESGRRAARQLIEQIA GSVEPRQIVIPAALN >gi|289775105|gb|GG745512.1| GENE 78 93373 - 94791 2073 472 aa, chain + ## HITS:1 COG:ECs5217_2 KEGG:ns NR:ns ## COG: ECs5217_2 COG1263 # Protein_GI_number: 15834471 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 92 472 1 381 381 654 91.0 0 MSKVNQQDIDKLIELVGGRGNIATVSHCITRLRFVLNDPAIAKPKEIEQLRMVKGCFTNA GQFQVVIGTEVGDYYKALLATTGQTSADKEQVKQAARQNMKWHEQLISHFAEIFFPLLPA LISGGLILGFRNVIGDLPMSNGQTLAQMHPSLKTIYDFLWLIGEAIFFYLPVGICWSAVK KMGGTPILGIVLGVTLVSPQLMNAYLLGQQVPEVWNFGLFTIAKVGYQAQVIPALLAGLT LGFIETRLKRIVPDYLYLVIVPVCSLILAVFLAHAIIGPFGRLIGDGVAFAVRHLLTGSF APIGAALFGFLYAPLVITGVHQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIII ASRKQNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVLAN GIGVGGLPGILSIQPTYWQVYAMAMAIAVVVPIILTTVVYQRKYRQGTLQIV >gi|289775105|gb|GG745512.1| GENE 79 94843 - 96498 2237 551 aa, chain + ## HITS:1 COG:ECs5216 KEGG:ns NR:ns ## COG: ECs5216 COG0366 # Protein_GI_number: 15834470 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 550 1 550 551 947 81.0 0 MNHLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTSRLDYLQKLGVDAIWLTPFYVSPQ VDNGYDVANYTAIDPSYGTMADFDALVAEAKARGIRIVLDMVLNHTSTEHEWFRQSLNKE SPYRQFYIWRDGEPDALPNNWRSKFGGNAWQWHADSGQYYLHLFAIEQADLNWENPAVRA ELKKVCEFWADRGVDGLRLDVVNLISKDQTFPCDAEGDGRRFYTDGPRVHEFLQEMSRDV FTPRNLMTVGEMSSTSLEHCQQYAALDGRELSMTFNFHHLKVDYPGGEKWTLARPDYVAL KALFRHWQQGMHNRAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYI YQGEEIGMTNPHFSSISDYRDVESHNMFIERAAQGQSPDELLAILASKSRDNSRTPMPWH AGENGGFSDGEPWIGLGDNYREINVEAALADPDSVFYAYQQLITLRKTLPLLTWGDYQDL LPDHPSLWCYRRQWQGQTLVVAANLSRDLQTWQPEEAQGDWKMIISNYAETTPRPTGLTL RPFEAVWWLQA >gi|289775105|gb|GG745512.1| GENE 80 96423 - 96614 56 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMGAGDKCKFIWLENKQKCLASTSDARHYAPVSVGQEVPYACSHHTASNGRSVRPVGRGV VSA >gi|289775105|gb|GG745512.1| GENE 81 96884 - 99022 2836 712 aa, chain + ## HITS:1 COG:STM4452 KEGG:ns NR:ns ## COG: STM4452 COG1328 # Protein_GI_number: 16767698 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Salmonella typhimurium LT2 # 1 712 1 712 712 1450 95.0 0 MTPHVMKRDGCKVPFKSERIQEAILRAAKAAGVDDADYCATVAEVVSQQMQGRAQVDINE IQTAVENQLMSGPYKQLARAYIEYRHDRDSQREKRGRLNQEIRGLVEQTNSALLNENANK DSKVIPTQRDLLAGIVAKHYARQHLLPHDVVMAHERGMIHYHDLDYSPFFPMFNCMLIDL KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESF KKHRKIAEEWQIPDAEGYARARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQQSILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQVHDGRNNLGVISLNLPRIALEA KGDETAFWALLDERLQLARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF KNGRASISLGYIGIHETINALYGNQHMYDSEALREKGVAIVQRLRDAVDVWKEETGYGFS LYSTPSENLCDRFCRLDTAEFGIVEGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL ANGGFICYGEYPNIQHNLKALEDVWDYSYEHVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG >gi|289775105|gb|GG745512.1| GENE 82 99570 - 100034 627 154 aa, chain + ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 305 90.0 2e-83 MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGMPFTAEMADRIIADLN DTRIKRQGISLSGGDPLHPQNVAEILKLVQRVRAECPGKDIWVWTGYKIDELNAEQMEVV NLINVLVDGKFVQDLKDPALIWRGSSNQVVHHLR >gi|289775105|gb|GG745512.1| GENE 83 100052 - 101962 2427 636 aa, chain - ## HITS:1 COG:STM4448_1 KEGG:ns NR:ns ## COG: STM4448_1 COG3711 # Protein_GI_number: 16767694 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 1 512 1 513 513 749 72.0 0 MRFPNQRLAQLFTLLRNETLPQDELAQRLSVSTRTVRADITALNALLAQYGAQFILNRGS GYQLKIDNPASFQALEETAPKTQHVPRTAQDRITFLLVRFLTSAFSIKLEDLADEWFVSR ATLQNDMVEVRERFQRYQLTLETRPRHGMKLFGSEVSIRACLTDLLWELAQQGGINPLIG AEALEADVPAQLEPVLQETLTRHHIRLTDVGERFICLYGAVVVRRVSEGYPLADFSAEDV AQNVRDAARDLAGELQRLAGKPFSPAEEEWLCVHLAARQVQDVDPETISADDDEALVNYI LRYINSQYNYNLLDDAQLHADLLTHIKTMITRVRYQIMIPNPLLDNIKQHYPMAWDMTLA AVSSWGKYTPYTISENEIGFLVLHIGVGLERHYNIGYQRQPQVLLVCDTSNAMVRMIEAI LQRKYPQLEIAATISQREYEQRDAIEADFVISTVRISEKDKPVVTIAPFPTDYQLDQIGK LVLVDRTRPWMLNKYFDAAHFRVVDKPMDQQTLFAELCQQLLEEGFVDAEFHASVVEREA IVSTMLGDGIALPHSLGLLAKKTVVYTVIAPQGIAWGDETAHIIFLLAISKREYEEAMAI YDIFVTFLRERAMSRLAATRSFDEFKTVAMECVSRF >gi|289775105|gb|GG745512.1| GENE 84 101985 - 103139 1296 384 aa, chain - ## HITS:1 COG:RSp0183 KEGG:ns NR:ns ## COG: RSp0183 COG2706 # Protein_GI_number: 17548404 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Ralstonia solanacearum # 26 381 59 406 410 174 33.0 3e-43 MPVARHLLVASLSLFAAAAGAAQTHYAWVGTYNPNGEGLYCFTVDANTGALRGRALVSAL PNVAQLTVSRDGKTLYAASEVEKGVVQAWRIEKNGELTALSQVASGGAGPVYLSLTPDGK HLLVANYVSGSIAVLPVKEDGSLGEAVDRHQDEGTAGAERPAAAVEGSFAISDHNGPHAH MIAADPSGKFVYSTDLGLDRIYQYRLDSASGKLTPNDPPFIAASSPGAGPRHFVFTPKGD GLWLINEEASTLTFYHLDKQSGLLREGKTVSALPKEYKGTSFAAGLALSNDGKQLYVANR LHNSIAHFTVQADGRLSHQEDIWTRGDYPRTLTLDNQGQWLYVMNQRSDNITRFSVAPKD GKLTFASDYTPVGSPSQMVISAQP >gi|289775105|gb|GG745512.1| GENE 85 103266 - 104006 1080 246 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4609 NR:ns ## KEGG: Kvar_4609 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 246 1 246 246 478 100.0 1e-134 MKLTPNFYRDRVCLNVLAGSKDNAREIYDAAEGHVLVGVLSKNYPDVASAVADMRDYAKL IDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNETVVNGLVSPT GTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMGGLKHRAEFEAVAKAC AAHDFWLEPTGGIDLDNYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEM TKQLVK >gi|289775105|gb|GG745512.1| GENE 86 104003 - 105121 1488 372 aa, chain - ## HITS:1 COG:STM4446 KEGG:ns NR:ns ## COG: STM4446 COG1921 # Protein_GI_number: 16767692 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 372 1 372 372 635 88.0 0 MPSIFEKYHLKQVINTSGRMTALGVSTPRPEVVEAAMAGMNQYFEMKDLVNKTGEYIARL LDVEGATVVSCASAGIAQSVAAVLVKDSDWLLENLHVTPIENNEIVLPKGHNVNFGAPVG TMVALGGGKLVEAGYANECSADQLAAAITPRTAAILYIKSHHCVQKSMLNVAQAAEVARQ HGLPLIVDAAAEEDLQCYYRMGADLVIYSGAKAIEGPTSGLVIGKTQYVEWVKRQSMGIG RAMKVGKEGILGLTCAIEHYLTASKESGEQMVAKMTPFIEQLNTLNGVTARVVWDSAGRD IARAEIKFNEAVTGVKTGDLVNALKQGEYAIYFRGYKANEGIIEADVRSVNAQQLAVVAR RIAEVLNKEKQA >gi|289775105|gb|GG745512.1| GENE 87 105105 - 106238 1520 377 aa, chain - ## HITS:1 COG:STM4445 KEGG:ns NR:ns ## COG: STM4445 COG3964 # Protein_GI_number: 16767691 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 1 377 1 377 377 614 81.0 1e-176 MFDLLLRRARLVDDTLIDIAIQDGKIAALGEISAPSRNTLDLHGNSYVSAGWIDSHVHCY PNSPIYHDEPDSVGIATGVTTVIDAGSTGADDVDDFYQLTRNAATEVYALLNISRVGLIA QNELANMANIDAAAVKQAVQRHPDFIVGLKARMSSSVVGENGITPLARAKAIQQENGDLP LMVHIGNNPPNLDEIADLLSRGDIITHCYNGKPNRILNPAGELRSSITRALQRGVRLDVG HGTASFSFEVARRAIALGILPHTISSDIYCRNRIDGPVRSLALVMSKFLAIGMTLPQVIA CVTVSAAEGLRLSRKGRLEVGFDADLTLFRLEHRPTLLVDAEKESLQADNILVPLAAIRA GKGYLTEQGSAEHAFDF >gi|289775105|gb|GG745512.1| GENE 88 106352 - 106996 1147 214 aa, chain - ## HITS:1 COG:no KEGG:KPK_5026 NR:ns ## KEGG: KPK_5026 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 214 1 214 214 320 100.0 2e-86 MEQNKGFWYADWSFPIFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVAMLKSGIDTGVYGA VAAFGASFLFARIIEGSLVGILDIGGAIQTGIGLGVPALLLGAGFVFPVANFAASLVTGL VLGLAVGYIIILARKFTINQSDSTYGADVMMGAGNASGRFLGPLIILSAMTASIPIGIGS LVGALLFYIWQKPITGGAILGAMILGSIFPVAIS >gi|289775105|gb|GG745512.1| GENE 89 107010 - 107786 976 258 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4613 NR:ns ## KEGG: Kvar_4613 # Name: not_defined # Def: inner membrane protein # Organism: K.variicola # Pathway: not_defined # 26 258 26 258 258 436 100.0 1e-121 MFLIILIKSLIIGGLVGVGVGAGAARMFHAPTTQGMGAFRTLGELNSCEGDPASHFSFGL GFFFNAWASSVAAGSFTQDVDHRIIPNWGAAALMLKNRNVGETLHDPKKMAISCGIIGMI VVAFLNLTASSVPEALQVTAVKVLVPAANLLVNTVMPVIFWLAAIDAGKKSGFWATIFGG AAQLIMGNAVPGLVLGILIGKGVEESGWNRVTKVMMVAIVALFVLSGFFRGFDMKMIESF HLTVPNWLDMIHNSLSGK >gi|289775105|gb|GG745512.1| GENE 90 107808 - 108107 356 99 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4614 NR:ns ## KEGG: Kvar_4614 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 99 1 99 99 159 100.0 3e-38 MKEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKTSSHILLRIEPQDVTVVHAREAVRK EAFLFFFLRRERRTYSVELDVTVNVTAIDLDKVDFVTQT >gi|289775105|gb|GG745512.1| GENE 91 108110 - 108472 482 120 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4615 NR:ns ## KEGG: Kvar_4615 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 120 1 120 120 190 100.0 1e-47 MEQITVVIGDRLGKGQKVAAGAEKAGARAVVVPGVAADMKLGDMMKAENATFGISFCGSG GAGAITAQTKYGYKAKYGMRSVEEGVTAINEGCNVLGFGFMDKEELGERLVEAWKKKYGA >gi|289775105|gb|GG745512.1| GENE 92 108483 - 108821 341 112 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4616 NR:ns ## KEGG: Kvar_4616 # Name: not_defined # Def: PRD domain protein # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 201 100.0 8e-51 MNNGAVIHDEGEQAAQTERLADKMLQQVYALLNRHGIVPNDVQEQMLTSHVRAMAHRSIS GEPLPEVDASLFEEISPDSMTLAREVVAQFGNLPDEEAWLLSVHFEVAKENL >gi|289775105|gb|GG745512.1| GENE 93 109111 - 109497 637 128 aa, chain - ## HITS:1 COG:STM4439 KEGG:ns NR:ns ## COG: STM4439 COG3783 # Protein_GI_number: 16767685 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 149 73.0 2e-36 MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAV DAQKETPPKLEGKAADSAEMKDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTR NTYHKKYR >gi|289775105|gb|GG745512.1| GENE 94 109534 - 110886 1634 450 aa, chain - ## HITS:1 COG:STM4438 KEGG:ns NR:ns ## COG: STM4438 COG0312 # Protein_GI_number: 16767684 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Salmonella typhimurium LT2 # 1 450 1 450 450 837 92.0 0 MALAMKVISQVAQQRKTLEEAVTTALELAAGKSDGAEVSVSKTTGIGVSTRYGEVENVEF NSDGALGITVYHQNRKGSASSTDLSPDAIARTVQAALDIARYTSPDPFAGVADKELLAFD APDLDLFHPAEVSPDEAIELAARAEQAALKADKRITNTEGGSFNSHYGIKVFGNSHGMLQ SYCSTRHSLSSCVIAEDDGDMERDYAYTIGRAIEDLQSPEWVGEECARRTLSRLAPRKLS TMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKG LASTPFDSEGVRTERRDIIKDGVLTQWLLTNYSARKLGMKSTGHAGGIHNWRINGRGLSF AKMLKEMGTGLVVTELMGQGVSGVTGDYSRGASGFWVENGEIQYPVSEITIAGNLKEMWR NIVTIGDDIETRSNIQCGSVLLPEMKIAGQ >gi|289775105|gb|GG745512.1| GENE 95 110982 - 111533 768 183 aa, chain + ## HITS:1 COG:STM4437 KEGG:ns NR:ns ## COG: STM4437 COG3028 # Protein_GI_number: 16767683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 254 92.0 7e-68 MTKQPEDWLDDVPGDDVEDEDDEIIWVSKSEIKRDAEELKRLGAELVDLGKNALDKIPLD TDLRDAIELAQRIKKEGRRRQLQLIGKMLRNRDVDPIRQALDKLKNRHNQQVALFHKLEQ IRDRLIDDGDDAVAEVLNLWPDADRQQLRSLIRNAKKEKEGNKPPKSARLIFQYLRELAE NEG >gi|289775105|gb|GG745512.1| GENE 96 112167 - 113375 1654 402 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4620 NR:ns ## KEGG: Kvar_4620 # Name: not_defined # Def: thioredoxin-like protein # Organism: K.variicola # Pathway: not_defined # 1 402 1 402 402 806 99.0 0 MKKTLVLTTIALLVSGSAAAKTWVLTNAEEGMDKGNWQISSDQLKVKDHAFSIEQKVLHG GKQEGSKILTIHSKDGLTITLSPTRGMNLLRIEGFGSRMGWDSPVKEVVNPAFINLESRN GLGWLEGFNEMMVRCGYEWTGHPVTADGQIYTLHGKAGNTPASRVEVEVADSAPYEIRIR GLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQIIYHSNFGTPILEEG ARFLAPMSSISPFNDYAKSGLKTWQTYQGPTKDFDEMVFNIQPLAGENHQTLAAVVNKAG DKGASIQFDTRQLPVLTLWKNTDTIKQGYVTGIEPGTSYAYPVTIEREQKRVKQLQPGAS AQFDLTYTLLHDSAQVAAVEQKIAQIQGDNKVAENETPIAKE >gi|289775105|gb|GG745512.1| GENE 97 113423 - 113950 679 175 aa, chain - ## HITS:1 COG:no KEGG:KPK_5037 NR:ns ## KEGG: KPK_5037 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 175 1 175 175 345 100.0 4e-94 MLTCERLRSTDSPHFATLDALYARAFPWHEQRESDAKLQALSHPRYALEAWFDEGVFIGL SGCWQFAGYGYIEHLAIDDTLRSRGYGKQLLAQILTRAPLTILEIDPLTTAIAHKRLRFY QSMGFHANAWAHHHPSYHQGIADHELLVLSYPQPIDERQYQQFARDLGREVMGRE >gi|289775105|gb|GG745512.1| GENE 98 114019 - 115392 1922 457 aa, chain - ## HITS:1 COG:ZyjfG KEGG:ns NR:ns ## COG: ZyjfG COG0773 # Protein_GI_number: 15804823 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 EDL933 # 1 457 1 457 457 897 93.0 0 MRIHILGICGTFMGGLAMLARSLGHEVTGSDANVYPPMSTLLENQGIDLIQGYDPSQLEP RPDLVIIGNAMTRGNPCVEAVLENNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGM ATWILEACGYKPGFVIGGVPGNFDVSARLGDSPFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGKGKIILPENDINLKQVMAMGCWSEQEL VGEQGHWQAKKLNADASQWEVLLDGEKVGEVKWALVGEHNMHNGLMAIAAARHVGVLPAD AANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLQALRGKVGGTARILAVLEP RSNTMKMGVCKDDLAPSLGRADEVFLLQPQHIPWQVAEVAEACVQPAHWSADVDTLAEMV VKTAHPGDHILVMSNGGFGGIHQKLLDKLAQKAAAAE >gi|289775105|gb|GG745512.1| GENE 99 115568 - 116566 1282 332 aa, chain + ## HITS:1 COG:fbp KEGG:ns NR:ns ## COG: fbp COG0158 # Protein_GI_number: 16132054 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Escherichia coli K12 # 1 332 1 332 332 665 96.0 0 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQQKLDLFANEKLKAALRARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNRQVAAGYVVYGSSTMLVYTTGCGVHAFTY DPSLGVFCLCQERMRFPEKGNTYSINEGNYIKFPQGVKKYIKYCQEEDKETQRPYTSRYI GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI IPESLHQRRSFFVGNNHMVEDVENFIKAFPDA >gi|289775105|gb|GG745512.1| GENE 100 116609 - 117583 1423 324 aa, chain - ## HITS:1 COG:ECs5208 KEGG:ns NR:ns ## COG: ECs5208 COG1172 # Protein_GI_number: 15834462 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 323 481 94.0 1e-136 MITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSV IAFTGVFLAKAIGFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLR GVSYLVSEESIPINHPVYDTLSGLAWTIPGGGRLSAMGLLMLLVVVAGIFVAHRTRFGNQ VYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAI ASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQ RGLTVLWENRQNAAVTRVSGAGSR >gi|289775105|gb|GG745512.1| GENE 101 117594 - 118619 1494 341 aa, chain - ## HITS:1 COG:ECs5207 KEGG:ns NR:ns ## COG: ECs5207 COG1172 # Protein_GI_number: 15834461 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 434 87.0 1e-121 MMPRSLSQTGPEKRRFSWPKGTPQIIALLLVLLVDSLVAPHFYQVVLQDGRLFGSPIDIL NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATAASMTVAGHSLAVVVLASLGAGAL AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFDSPALAWLGSGSFLLFPT PVIIAAATLLLFWLFTRKTALGMFIEAVGINIRAAKNAGVNTRIVVMLAYVLSGVCAAIA GIIVAADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVVGALIIQGMNTGIL LSGFPPELNQVVKAVVVLCVLIVQSPRFIGLLKGVRGHDKT >gi|289775105|gb|GG745512.1| GENE 102 118630 - 120132 193 500 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 270 477 11 214 245 79 25 2e-13 MSAEAHQEILRTEGLSKFFPGVKALDNVNFSLRRGEIMALLGENGAGKSTLIKALTGVYH ADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPRRFGLLRRK EMEARATALMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE VEMLFTLMRQLRDNGVSLIFVTHFLDQVYAVSDRITVLRNGSFVGCRETRELPQIELVKM MLGRELDHNALQRAGRTLLSDKPVAAFEGYGKKGTIAPFDLQVRPGEIVGLAGLLGSGRT ETAEVIFGIKTADSGKAWIKGKPQTLRSPHQASCLGIGFCPEDRKTDGIIAAASVRENIV LALQAQRGWLRPIPRREQNEIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVLLSRWLLTK PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRRQ VAEIPLAELSVPAIMNAIAA >gi|289775105|gb|GG745512.1| GENE 103 120256 - 121212 1221 318 aa, chain - ## HITS:1 COG:ytfQ KEGG:ns NR:ns ## COG: ytfQ COG1879 # Protein_GI_number: 16132049 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 318 1 318 318 536 92.0 1e-152 MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIAD GQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKD LYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVGASVAIDRKKGFADAIAKASN IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMVIGAIQAIKEAGLKPGK DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTL YLPDTAKEELEKKKNMGY >gi|289775105|gb|GG745512.1| GENE 104 121616 - 122146 753 176 aa, chain + ## HITS:1 COG:STM4414 KEGG:ns NR:ns ## COG: STM4414 COG0221 # Protein_GI_number: 16767660 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 341 97.0 3e-94 MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEVDKESGALFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDESGEDAKLVAVPHTKLSKEYDH INDVNDLPELLKAQITHFFEHYKDLEKGKWVKVDGWDNAEAAKAEIVASFERAKQK >gi|289775105|gb|GG745512.1| GENE 105 122221 - 123408 589 395 aa, chain + ## HITS:1 COG:no KEGG:KPN_04620 NR:ns ## KEGG: KPN_04620 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 395 1 395 395 714 92.0 0 MKSVRYFTLNYTGFTTAACEKQGYLRLIAGEHVFYTDKRYFKDPALFDRLTINQPLHLGV RRLDNGCYWIHWLSDGETLLEPSQRVTRWARPLLIISLLTLIVALIPLVMSTSEWGRFGC GIIAILAFIGLLTGLYERLFHPALKRHPAMRDLLAKMAMARRRDFSFCQPLPATAKALRQ TAMPFTQALPERYAVRTGKISNIVFKKWFAGNPTREYHGVGIQCDTAPLAFFWQNGFANF GLHPFFYRRQPPFLAIGDRIVAVYQRKDNDIQALYNVSDGGAFLKNHPCYPGDRQMSLVY NLFYGMVLVMYLLILGMSLNNPYKPARGFWWLIQDSLDMLSLLLLSFGGILAVLELIGPT AWLLSHRVVDWLKMRSAMRRYLQGVARHTALEEIM >gi|289775105|gb|GG745512.1| GENE 106 123553 - 123897 210 114 aa, chain - ## HITS:1 COG:ECs5200 KEGG:ns NR:ns ## COG: ECs5200 COG2105 # Protein_GI_number: 15834454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 113 1 113 113 187 82.0 5e-48 MRIFVYGSLRRKQGNSHWMTNAQWLGAHSVNDYQLYSLGHYPGAVPGEGTVHGEVYRIDA STLAELDALRTKGGEYARHLIQTPYGSAWMYVYQRSVEGCTLIANGNWLDRDQY >gi|289775105|gb|GG745512.1| GENE 107 123900 - 127676 4856 1258 aa, chain - ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 1258 1 1259 1259 2056 81.0 0 MSLWKKISLGVLIVLVLLLGTVGFLVGTTTGLHLVFKAADRWVPGLDIGKVTGGWRDLTL DNVRYEQPGVAVTAGQFHLSVRLRCLWDSSLCVNDIALRDIYVAVDTKKMPPAAPVEEED SGPLNLSTPYPITLSRVALHNVNVKIDDTAVSVRDFSTGLNWQEKNLTLTPTSLQGLLIA LPKVAKVAQEQVVEPKIDNPKPQEKPLGETMTDLFSQPVLPAMTDVHLPLNLNIQAFRGE QLRLTGDTDITVYNLLLKVSSIDGQMKLDALDIDSDQGKVSASGHAQLQDNWPVDITLAG TLNVDPMKGEKVQLKVGGEVRKTLKVGVDLSGPVAATLRADAQLAEAGLPLNMELKSKQL AWPFSGEKQFQADDVQLKFSGKMTDYALAFSTAVKGQSLPPAKITLNAKGNERQINLDKL TVNALEGKTELKALLDWQQAISWRGELTLDGINTAKEVPDWPSKLNGMIKTQGSLYGGSW QMSVPELKITGNVKQNKVDVSGSLQGNSYLQWKIPGLHLALGPNSADIKGELGVKDLNLD ATIDAPHLDNALPGLGGTAKGLVKVRGTVDAPQLLADITARALRWQELTIAQVNVKGDVK STDQIGGNLDVRVDRISQPGVNISLVQLNAKGTEKQHELRLRVQGDPVSGQLTLAGSFDR QAERWRGSLSDTRFQTPVGPVALTRSIALDYRNQEQKISIGPHCWTNPNAELCVPQTIDA GASGRARVNLNRFDLAMLKPFMPEATQASGVFTGNADVSWDTTKEGLPQGKVTLSGRNVK VTQVVNDAPLPVAFDTLNLSADLHNNRAELGWLIRLTNNGQLDGQVQVTDPQGRRNLGGN VNISNFSLAMINPIFARGEKAEGRLNARLRLGGNVKSPQLFGQMQLSGVDIDGNFMPFDM QPSQLAMNFNGTRSTLQGTVNTRQGQIALSGNADWTQIDNWRAQIAAKGSRVRITVPPMV RLDVSPDVVFTATPSLFSLDGKVDVPWARIVVNEVPESAVGVSSDEVMLDKNLKPINQQS AGIPINSNLTIHVGNNVRLEAFGLKARLTGDLKVAQDKQGLGLNGQINIPDGRFHAYGQD LIVRKGELLFSGPPDQPLLNIEAIRNPDATEDDVIAGVRVTGSADQPKAEIFSDPVMSQQ EALSYLLRGQGLSSGQSDSAAMTSMLIGMGVAQSGQVVGKIGETFGVSNLALDTEGVGDS SQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPRLYVEAVSGIDQALDLLYQFEF >gi|289775105|gb|GG745512.1| GENE 108 127673 - 129406 2045 577 aa, chain - ## HITS:1 COG:STM4409 KEGG:ns NR:ns ## COG: STM4409 COG0729 # Protein_GI_number: 16767655 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 1009 84.0 0 MLKIRQLCITSLLLVSGVASAANVRLQVEGLSGELERNVRAQLSTIQSDEVTPDRRFRAR VDDAIREGLKALGYYEPTIEFDLRPPPKRGRQVLIAKVTPGEPVRIGGTEVILRGGARTD SDYLALLKTRPAIGTVLNHGDYDGFKSSLTRVALRKGYFDSEFNKSQLGVSLDRHQAFWD IDYDSGERYRFGHVTFSGSQIRDEYLQNLVPFKEGDYYTSQDLAELNRRLAATGWFSSVV VAPDFAKSRKTKVLPLQGVVSPRKENTVETGVGFSTDVGPRVKATWKKPWMNSYGHSLTS SVSLSAPEQQFDFTYKVPLLKSPLEQYYLMQGGFKRTDLNDTQADSTTLGVSRFWEMSSG WQRAINLRWSLDHFTQANVTNTTMLIYPGVSVNRTRSRGGLMPTWGDSQRYSVDYSNTMW GSDINFIVMQAQDVWIRTLYDRHRFVVRGNLGWIEADNFDKVPPDLRFFAGGDRSIRGYK YKSISPKDDDGKLIGASKLATGSLEYQYNVSGKWWGAVFVDSGEAVSDIRESDFKTGAGV GVRWQSPVGPIKLDIARPIGDKEEHGLQFYIGLGPEL >gi|289775105|gb|GG745512.1| GENE 109 129546 - 130250 767 234 aa, chain + ## HITS:1 COG:msrA KEGG:ns NR:ns ## COG: msrA COG0225 # Protein_GI_number: 16132041 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Escherichia coli K12 # 24 234 1 211 212 368 89.0 1e-102 MFIVLKDTLRYNLNDDFCIERPTVSLFDKTHLVAQADALPGRNTPMPVATLHAVNGHSMT NVPAGMEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAV RVVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQTAAAKASLARF QAAMNDAHDTRHITTEIATAKPFYYAEDDHQQYLYKNPHGYCGIGGIGVCLPPQ >gi|289775105|gb|GG745512.1| GENE 110 130281 - 130952 356 223 aa, chain - ## HITS:1 COG:STM0769 KEGG:ns NR:ns ## COG: STM0769 COG1767 # Protein_GI_number: 16764133 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Salmonella typhimurium LT2 # 1 223 1 232 232 130 38.0 2e-30 MEETVLLDVQRIQTSEQSSIILHSVRAVDLVNHLVPELHLLDSHSEPYNVQKTVVNCLYA GQQLARERRVVLPLLPESLYLLGGMVIAAGKTIEKKEVITHNRLCEEAGRLLKDEAVWES IDIIRSVALPVYRRLVKEQRTHVASLLQALLHILAWRSESGWARDQAQRILWAGGVFGTA GIDSLIAFDRALAEKEMTFPSLREWLTVTAFLAHFPAGPVFSD >gi|289775105|gb|GG745512.1| GENE 111 131052 - 132341 921 429 aa, chain - ## HITS:1 COG:CAC0628 KEGG:ns NR:ns ## COG: CAC0628 COG1914 # Protein_GI_number: 15893916 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Clostridium acetobutylicum # 23 416 20 415 417 94 21.0 4e-19 MNNLEKTSSTVPAQIEKLPFSQLIRRIGPGIVLTGVVVGPGAITTASMLGADYGYSLLWL LIPIAFMGITFMLTTYRISMLTGMPSIEAIRHYYGKVASGFVGGATFLACLFFTMGNISG TGAGMNLVFGIDWKLGALIMIAVMIYCYFSKGVYSKVEKGITICIVAMIIAFYITLVGTG GPDWKASGEGLTHWMFPAGSLVTALGFISTNASLTTGIYGTYLGKEKKWKKDDLFNGVMV ADTVAHIIGVLLISGAIILVGAIVLFPQGISINTPTQLADLLTPSMGRAAKYIMGVALLG AGFSSLLGNTQRGVVLLNSGFNKSTALESKAVQWGSMVVLVVAGLICFSFGGSPVQLIYL ANVATAVSTPVAGLFICLLLWRKDINKGYKAPRLLQICMAISYLFCLLLTLVALINTLPK FMSSLSTLF >gi|289775105|gb|GG745512.1| GENE 112 132471 - 133403 1170 310 aa, chain - ## HITS:1 COG:AGpA569 KEGG:ns NR:ns ## COG: AGpA569 COG0329 # Protein_GI_number: 16119621 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 307 1 304 313 394 63.0 1e-110 MKALDLRGIVPAPVTPFTRDGRIDHQAIKRLGSWLGSVKGVKGLVVLGHAGEGTFLTQQE QADVIRSFVDSTEGRVPVIAGITGEGTEVAALEAQRAVDAGASAGLLYPSHGWLRFGYQK GAPQDRYRVVYEESGLPLILFQYPDVTKATYNLETMLDISAQPGVFAMKNGVRNMRRWDT EIPVIRRERPDLQILSCHDEYLLHTAFDIDGFLVGYGNIAPELLLELLEAGKAQDYVKAK AVHDRLLPVTKAVYHRGSHMEGTVALKHALVERGILEHATVRSPLLPLEPGAEEEIKAAI REAGIKKAVI >gi|289775105|gb|GG745512.1| GENE 113 133740 - 134717 357 325 aa, chain + ## HITS:1 COG:AGpA567 KEGG:ns NR:ns ## COG: AGpA567 COG1609 # Protein_GI_number: 16119620 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 321 30 352 357 322 55.0 5e-88 MQDVARAAGVSVSTVSRVLDERLPPSRSPSAEKIREAAKLLGYRRDYVASSLRRGDTGTI GVLVPRLTDTVTAMFYEAVSQAAARHGYFTVVATCGNDPETEERATQSLLDRRVDGLILS TCRLGDRLPQQLREKQINHVLALRTDGISPSAIGDDELGGYLATRHLLDLGHREIGIIAG PNFSSSTLNRQKGFLRAMQEAQAEVNPQWWRDSDFTIVAGENAGYEILNSPARPSAIFAV NDDLAIGVMAAAHRLGLEIGRDVSLVGYNDIPLVSRLPIPLTSVKTPLDQLASHAVELLL SNHAENPQRYSLPTLIPRASTRPYR >gi|289775105|gb|GG745512.1| GENE 114 134822 - 135574 531 250 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4640 NR:ns ## KEGG: Kvar_4640 # Name: not_defined # Def: oligogalacturonate-specific porin # Organism: K.variicola # Pathway: not_defined # 1 250 1 250 250 466 100.0 1e-130 MRTKTAFIMCCVLGIPAAGHALTFDVRGGYRAGSHSYESRYKVSQGWETGWWASMEMDNK NNKNNHQGNQGTDRADGSHSFGDSTVDYNEIEANYSWPFADKWALQPGGIYHWSSKGTQL RPYLRVNYKATPDLTFGLRYRYDYNTYETVNSAGESHRDSVNRLDLYVAYKFNAQWSALY QGTVYRHVNDDYKYKNDKSSATENALTLRYKWNDWFSPYIEYDYLGKQGYHDGQNKISES RYRIGMTFTL >gi|289775105|gb|GG745512.1| GENE 115 136095 - 137432 1884 445 aa, chain + ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 1 445 1 445 447 801 91.0 0 MLNSILVILCLIAVSAFFSISEISLAASRKIKLKLLADEGNVNAQRVLKMQENPGTFFTV VQIGLNAVAILGGIVGDAAFSPAFHSLLSGYMSPELSEQLSFIISFTLVTSLFILFADLT PKRIGMIAPETVALRIINPMRFCLLVFRPLVWLFNGMANMIFRIFKLPMVRKDDITSDDI YAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTSRENVIWFDLHEDEQSLKNKVAE HPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLVLTGGVQIRNTLIVPDTLTLSEALE SFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTP IDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDAVKFSGYKFEVVDIDNYRIDQL LVTRIDNKPTVLVPKQAEAAESQNA >gi|289775105|gb|GG745512.1| GENE 116 137633 - 138865 1168 410 aa, chain + ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 23 396 24 400 417 292 42.0 7e-79 MITSNKNYFISCLFFLFFFIGWGCCYPYLSLWLTETIGINYTDVGLVYSFTAIVAVCVQP LFGFISDKLVYRKNLMWMLAIIITLFAPYWIYVFAPLLKINVFLGALAGGLYIGMAYGAG CGVCEAYIDKVSRASSFEFGRARMFGGIGAAIGTFAAGKLYGIDQNMIFWLASGAGVCLL VIVWKMQISAHPQQGLLSGKASPVTLRDAVSLLKIKKFWFFALYVIGVGAVYETYDQQFA IYYSHFFESKARGAEVFGYLTTGQIFLDAIVMFFAPWFVNKIGPKNALLYCGLIMSLRII GSAWAIGPVSISLIKLLHGFESSVLLVAALKYITANFNPLLSATVYLIGFQFSKSFSSIF LSTGIGHMYQSMGFTSSYIVLGGIALCFTLISFITLDKARVFASQPVPAN >gi|289775105|gb|GG745512.1| GENE 117 138884 - 140893 2327 669 aa, chain + ## HITS:1 COG:TM1195 KEGG:ns NR:ns ## COG: TM1195 COG1874 # Protein_GI_number: 15643951 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Thermotoga maritima # 7 663 3 645 649 203 26.0 1e-51 MSHLFYGVAYYDEYMPEDRLAKDIALMRETGINVVRIAESTWSTLEPEEGQYNFYHIDRV LEAMHEAGIAVIVGTPTYAVPAWLAAKHPDILVTTVAGQQKYGPRQIMDIVNPTFRRYAE KIIRTLMAHVQHHPAIIGWQLDNETKHYDNIGRYMQEGFVRSLQEKYPDLRQLNRDFGLD YWSNRIDRWQDFPPVENTINASLACAFSRYQRQQVTEYLAWQAAIVREYAQPHQFVTHNF DFEWRGYSYGVQPRVDHFAAAQALDIAGVDIYHPSQAHLTGREIAFGGAITRSLKPGQNY FVLETQAQGFAQWTPFPGQLRLQAFSHIASGAAMVSYWHWHSIHNAFETYWKGLLSHDFS RNPTWQEATSIGADFARLSPQLAELKAENDVALLISNEAMDALNHFRPGDAEGNIYNDIF RRFHDALYDHNISLDIIHDVNEETSRYRVLIVPGLYAADDGLLTRINDYIARGGRALIGF KSGFSDENVKVRNSAQPGILRQSCGVSYSQFTLPEGTTVSSCCAEIDCRNDNQAELWMEL LTPDGGTRTLLRYQHPAWGEYAAATAADYGQGRALYVGFLPHKRLISQLFDVLTADLTLN SRTSAYRYPLVVKKMSNRAGNTIHFLFNYSGEALDVVSETAGTALLSGEAVDVGQPLRLR AWEFTIIES >gi|289775105|gb|GG745512.1| GENE 118 140924 - 141796 702 290 aa, chain + ## HITS:1 COG:YPO2258 KEGG:ns NR:ns ## COG: YPO2258 COG2207 # Protein_GI_number: 16122482 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 12 287 12 287 310 261 43.0 2e-69 MELDINELLNFSPLMKTFTFNAWVVAGFTPITRGSTLDYYINRPQGMKGYIINLTLRGQA RAKAGDGFLLCRENDLLLFPPGVPHHYGRDEHSEYWDHLWIYFIPRPYWIDWLKWDQTTH GIGKTTINDPDQLQQLRDLFYEVIRHHSASVPLSEALAMNALERLILRCFQQQPISNRHA HDPRINAICDYLNAHIAQEVKIETLAAMVFISPSRLAHLFKNELGQTVYAWRETQRINRA RWLIQSTSLPLNKIALSVGYSDPVYFTRLFRKHNGIPPGEYRKRYAEMKG >gi|289775105|gb|GG745512.1| GENE 119 141858 - 142064 334 68 aa, chain - ## HITS:1 COG:no KEGG:Z5828 NR:ns ## KEGG: Z5828 # Name: ytfK # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 68 14 81 81 119 98.0 6e-26 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQV LRLQTEMA >gi|289775105|gb|GG745512.1| GENE 120 142388 - 142945 499 185 aa, chain + ## HITS:1 COG:ECs5194 KEGG:ns NR:ns ## COG: ECs5194 COG3054 # Protein_GI_number: 15834448 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 183 1 183 184 302 80.0 3e-82 MTLRSILAASLLLLPLLATAHNFVDGQRVAPVGVADRGELILDKDKFSYKNWNSSQLVGK VRVIQHIAGRSSAKEKNANLIEAIKAAGFPHDRYQTTTIVNTDDAIPGTGMFVRSSIESN KKLFPWSQFIVDSNGLVRKAWQLDEKSSAIVVLDKDGRVKWAKDGALTQQEVQQVIDLLH KLLNK >gi|289775105|gb|GG745512.1| GENE 121 142935 - 143678 905 247 aa, chain - ## HITS:1 COG:STM4404 KEGG:ns NR:ns ## COG: STM4404 COG1218 # Protein_GI_number: 16767650 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Salmonella typhimurium LT2 # 1 247 1 246 246 419 87.0 1e-117 MLEQVCQLARNAGDAIMEVYDGNQPINVASKKDDSPVTAADIAAHKVIVSGLQALDPDTP ILSEEDPPSWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIENGKPTLGVVYAPVM KVMYSAEKGKAWKEECGVRKQIQVRDARPPLVVISRSHGNDPELQEYLEQLGEHQTTSIG SSLKFCLVAEGQAQLYPRFGPTSTWDTAAGHAVAVAAGAHVHDWQGKTLDYTPRESFLNP GFRVSIY >gi|289775105|gb|GG745512.1| GENE 122 143871 - 145814 2755 647 aa, chain + ## HITS:1 COG:STM4403 KEGG:ns NR:ns ## COG: STM4403 COG0737 # Protein_GI_number: 16767649 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 1 647 1 647 647 1180 89.0 0 MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTATLIE QARAEAKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNTLNYAVGNLGNHEFN YGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQPHTLRIGYIGFV PPQIMTWDKANLSGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENS VYYLSQVPGVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGDHLGVVDL VLNNDSGKWQVTQNRAEARPIYDAVAKKSLAAEDGKLVAVLKADHDATREFVSKPIGKSA DNMYSYLALVQDDPTVQVVNMAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS FVEVEKGQLTFRNAADLYLYPNTLVVMKVSGKEVKEWLECSAGQFNQIDPASSKPQSLIN WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMIHPQAERIKHLTFNGKPVDPQATFLVA TNNYRAYGGKFAGTGESHIAFVSPDENRSVLAAWIGAQSKKDGAIHPAADNNWRLAPIHS NTPLDIRFETSPGDKAAAFIKEKAQYPMRQVATDDIGFAIYQLDLSK >gi|289775105|gb|GG745512.1| GENE 123 146115 - 146486 613 123 aa, chain - ## HITS:1 COG:ytfH KEGG:ns NR:ns ## COG: ytfH COG1733 # Protein_GI_number: 16132034 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 123 31 153 156 209 83.0 8e-55 MAEPTLSEKLRNGNLFAEQCPSRDVLKHVTSRWGVLILVALREGTHRFSDLRRKMGGVSE KMLAQSLQALEQDGFIDRVSYPVVPPHVEYSLTPLGLQVSEKVAALADWIESNLPAVLAN HGE >gi|289775105|gb|GG745512.1| GENE 124 146577 - 147425 1164 282 aa, chain + ## HITS:1 COG:ytfG KEGG:ns NR:ns ## COG: ytfG COG0702 # Protein_GI_number: 16132033 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 278 1 278 286 398 86.0 1e-111 MIALTGATGQLGHYVLQDLLKTVPASQIVAIVRNPAKAQSLSQQGVVVRQADYSDEAALT AALQGVDKLLLISSSEVGQRAVQHRNVINAAKAAGVTFIAYTSLLHADTSPLGLAAEHIE TEQMLADSGIAYALLRNGWYTENYLASAPPALEHGVFIGAAGEGKIASATRADYAAAAAR VIAGEGHEGKIYELAGDNAWTLSDLAAELSTQSGKNVVYQNLSEADFAAALKSVGLPAGL ADMLADSDVGASKGGLFDDSRTLSTLIGRPTTSLAESVKGIL >gi|289775105|gb|GG745512.1| GENE 125 147503 - 148327 941 274 aa, chain + ## HITS:1 COG:mll5158 KEGG:ns NR:ns ## COG: mll5158 COG2207 # Protein_GI_number: 13474301 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 25 271 33 282 290 137 35.0 2e-32 MQGVPPQFSDEKDRARFRHLEQLPGVELYHAHISRYAFEPHTHEAFGIGVIEQGAERFRY RGSQHIAAANAIVTMNPDELHTGEAETADGWRYRMIYLEPDRLEAITGVRDWWFSEVVRE DPLRSRQIGQMIYGLWHSDDPLAQQGLLLDLIDAFRPLAHHASAQGEAGHRFDRVRDYLH DNYMRPITLDELAQVAALSPYHFQRQFKAHYHVTPHQMLMAIRLWRAKAFLTHGMPAAEV AIAVGLTDQSHLTRAFTLRYGITPVRYQKQVARR >gi|289775105|gb|GG745512.1| GENE 126 148404 - 149375 1236 323 aa, chain + ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 320 4 323 324 460 81.0 1e-129 MISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRARLRQLS RNDWWTALGLTMMGNLIYYACLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYSQRDGKL PWRRLFPALVCIAVGLICVNVAELRQGLPDFSPWRYGSGIALALGSVACWAWYALRNARW LRENPHQPPMMWATAQALVTLPVSLAGYLAACVWLHGQQAGFPLPFGPRPAVFITLMLAI AVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSGILLLVL GVVSAVRARPEKPMLQPLTDEKK >gi|289775105|gb|GG745512.1| GENE 127 149458 - 150120 873 220 aa, chain + ## HITS:1 COG:ytfE KEGG:ns NR:ns ## COG: ytfE COG2846 # Protein_GI_number: 16132031 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Escherichia coli K12 # 1 220 1 220 220 399 90.0 1e-111 MAFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAE QPLSRDWRAAPLPEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLT MLHQELSSHMMKEEQILFPMIKQGMGTQAGGPISVMESEHDEAGELLEVIKHITHNVTPP PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGK >gi|289775105|gb|GG745512.1| GENE 128 150187 - 151590 1975 467 aa, chain - ## HITS:1 COG:STM4398 KEGG:ns NR:ns ## COG: STM4398 COG1113 # Protein_GI_number: 16767644 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 466 1 466 469 790 93.0 0 MVDQVKVAAIEQEPTEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFAADLLGPWAGYFTGWTYWFCWVVTGMADVV AITAYAQFWFPGLSDWVASLAVILLLLGLNLATVKMFGEMEFWFAMIKIVAIVALIVVGL VMVMMHFKSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPLRIIMFYVFALIVIMSVTPWSSVVPSKSPFVELFVLVGLPAAASLIN FVVLTSAASSANSGVFSTSRMLFGLAQDGQAPKMFAKLSKRAVPAKGLTFSCMCLLGGVV MLMVNPSVIAAFTMITTVSAILFMFVWTIILCSYLVYRKKRPQLHEKSKYKMPLGKFMCW VCMAFFVFVLVLLTLEDDTREALMVTPLWFVLLGAGWLFAGKKRLAK >gi|289775105|gb|GG745512.1| GENE 129 151896 - 152516 926 206 aa, chain - ## HITS:1 COG:ECs5185 KEGG:ns NR:ns ## COG: ECs5185 COG0545 # Protein_GI_number: 15834439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 206 54 259 259 357 88.0 8e-99 MATPTFDTIEAQASYGIGLQVGQQLSESGLQGLLPEALVAGIADALEGNQPQVPVEAVHR ALREIHERADAVRRERFQAMAADGQKYLDENREKEGVNSTESGLQFRVLAQGEGPIPART DRVRVHYTGKLIDGTVFDSSVARGEPAEFPVTGVIGGWIEALTLMPVGSKWELTIPHNLA YGERGAGASIPPFSTLIFEVELLDII >gi|289775105|gb|GG745512.1| GENE 130 152735 - 153406 547 223 aa, chain + ## HITS:1 COG:ECs5184 KEGG:ns NR:ns ## COG: ECs5184 COG3061 # Protein_GI_number: 15834438 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Escherichia coli O157:H7 # 1 223 13 224 224 239 63.0 4e-63 MPGRFELTSTLAKIWHAPDHFRLLDPLPPMHRRGIIAGFLLVIIGILLPSDDSQNPASTS REANLNLQSQSQPQAGGNQAVPLPPITNTPTVSDADQMAPVAPEPIQDEQPDQAQTQQPA SQPYQSSQQQSAPGIEQQWRTYRIESGKTLAQLFRDHGLPATDVYAMAQVEGAGKPLSTL QSGQTVQIRQNANGVVTGLTIDTGNGQQVLFTRQSNGSFVRAR >gi|289775105|gb|GG745512.1| GENE 131 153515 - 153964 720 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206577504|ref|YP_002240846.1| ribosomal protein L9 [Klebsiella pneumoniae 342] # 1 149 1 149 149 281 100 2e-74 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNVEFFEARRAELEAKLAD VLSAAEARAAQINALESVTIASKAGDEGKLFGSIGTRDIADAVTAAGVKVAKSEVRLPNG VLRNVGEHEVDFQVHSEVFAKVIINVVAE >gi|289775105|gb|GG745512.1| GENE 132 154006 - 154233 385 75 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 1e-35 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|289775105|gb|GG745512.1| GENE 133 154558 - 154953 678 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206579361|ref|YP_002240848.1| ribosomal protein S6 [Klebsiella pneumoniae 342] # 1 131 1 131 131 265 100 1e-69 MRHYEIVFMVHPDQSEQVPGMIERYTGAITAAAGTIHRLEDWGRRQLAYPINKLHKAHYV LLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANET ADDSEAGDSEE >gi|289775105|gb|GG745512.1| GENE 134 155295 - 155570 341 91 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4661 NR:ns ## KEGG: Kvar_4661 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 91 1 91 91 154 98.0 1e-36 MKLKIIAMMAALFFSANALSAIQITERQARNMDDVQSLGVIYINHNMATEHEAEQALSQM SDAQGAKYFQPILMHEPETNGPLRASAVIYR >gi|289775105|gb|GG745512.1| GENE 135 155720 - 156913 1946 397 aa, chain + ## HITS:1 COG:RSc1445 KEGG:ns NR:ns ## COG: RSc1445 COG0477 # Protein_GI_number: 17546164 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 3 384 5 386 400 467 68.0 1e-131 MVPRFATLGRIPKGVWVLGGVSLLMDVSSEMIHSLLPLFMATTLGASVIIIGLIEGLAEA TALILKVFSGVISDYVGKRKGLALLGYGLGALSKPLFAIAPTAGVVFSARMIDRVGKGIR GAPRDALVADVTPPEIRGAAYGLRQALDTVGAFLGPLLAVLLMFIWANDFHAIFWVAVIP AVLSILLLGFGLQEPKSAIAHKRSNPLKRENLKKLSAAYWWVVAIGSIFTLARFSEAFLV LRAQQMEIPLFTIPLVMVAMNLVYSLTAYPFGKLSDSMSHSKLLQWGLLVLILADIVLAL SGHWSTLLLGVALWGIHMGMTQGLLAAMVAHTAPPELRGTAFGMFNLMSGLALLLASTGA GVLWETFGAASTFYAGAIICMVTLIGMRVMPSAYRQG >gi|289775105|gb|GG745512.1| GENE 136 156979 - 157665 885 228 aa, chain - ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 414 87.0 1e-115 MQQLKQQVFEANMDLPRYGLVTFTWGNVSAIERQCGLVAIKPSGVAYETMKADDMVVVDL EGNVVEGLYRPSSDTATHLALYRRYPDLGGVVHTHSTHATAWAQAGLAIPALGTTHADYF FGDIPCTRALSAQEVDEAYELNTGQVIIETLGASNPLHTPGIVVYQHGPFAWGKDAHEAV HNAVVMEEVARMAWIARGINPQLQPIDSWLMNKHFQRKHGPNAYYGQK >gi|289775105|gb|GG745512.1| GENE 137 157665 - 158519 962 284 aa, chain - ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 541 91.0 1e-154 MLAKSIPLGIYEKALPAGECWLERLQLAKALGFDFVEMSLDETDVRLARLDWSPEQRLAL VKAVADTGVRVPSMCLSAHRRFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYD VYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA >gi|289775105|gb|GG745512.1| GENE 138 158529 - 159179 1014 216 aa, chain - ## HITS:1 COG:STM4386 KEGG:ns NR:ns ## COG: STM4386 COG0269 # Protein_GI_number: 16767632 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 402 95.0 1e-112 MSLPMLQVALDNQTLASAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVL ADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGFWTWE QAQAWREAGIQQVVYHRSRDAQAAGVAWSEADISAIKRLSDMGFKVTVTGGLALEDLPLF AGIPIHVFIAGRSIRDAASPVEAARQFKRSIAQLWG >gi|289775105|gb|GG745512.1| GENE 139 159193 - 159660 673 155 aa, chain - ## HITS:1 COG:STM4385 KEGG:ns NR:ns ## COG: STM4385 COG1762 # Protein_GI_number: 16767631 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 154 1 154 154 271 89.0 3e-73 MKLHDSLAQNHSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVI APGLAMPHGRPEEGVKKTGFALVTLKKPLIFNHEDNDPVDILITMAAVDATTHQEVGIMQ IVNLFDDEANFDRLRACRSEQEVLDLIKNATAAAV >gi|289775105|gb|GG745512.1| GENE 140 159670 - 159975 361 101 aa, chain - ## HITS:1 COG:ECs5170 KEGG:ns NR:ns ## COG: ECs5170 COG3414 # Protein_GI_number: 15834424 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 189 96.0 1e-48 MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELNGADIIIASTHI AGEITVSGNKHVVGVRNMLSPADFGPKLLEVIKAHFPQDVK >gi|289775105|gb|GG745512.1| GENE 141 159988 - 161388 2023 466 aa, chain - ## HITS:1 COG:STM4383 KEGG:ns NR:ns ## COG: STM4383 COG3037 # Protein_GI_number: 16767629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 465 12 476 476 781 95.0 0 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGEAYSWVGYAVLLALALNICYVL LRRITGIRTIMLTGHIMFQQAGLIAVSFFIFGYGMWTTIICTAVLVSLYWGITSNMMFKP TQLVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TIFFGAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVGIGSSILIIPGFIPM FFSNATIGVFANHFGGWRAALKICLVMGMVEIFGCVWAVKLTGMSAWMGMADWSILAPPM MQGFASIGLAFMAVIILIALAYMFFAGRALRAEEDAEKQLAEASAQ >gi|289775105|gb|GG745512.1| GENE 142 161755 - 162819 1425 354 aa, chain + ## HITS:1 COG:STM4382 KEGG:ns NR:ns ## COG: STM4382 COG2220 # Protein_GI_number: 16767628 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Salmonella typhimurium LT2 # 1 354 1 354 354 734 96.0 0 MSKVQTITRESWILNTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGANVCV DFWCGTGKQSHGNPLMKTGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHN DHIDVNVAAAVMQNCPADVPFIGPKTCVDLWIGWGVPKARCIVMKPGDVVKIKDIEIHAL DAFDRTALITLPADQKAAGVLPDGMDQRAVNYLFKTPGGNLYHSGDSHYSNYYAKHGNEH QIDVALGSYGENPRGITDKMTSADILRMAESLNAKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >gi|289775105|gb|GG745512.1| GENE 143 162927 - 163682 908 251 aa, chain + ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 432 86.0 1e-121 MTEAQRHQILLDLLAQTGFVTVEQVMSRLGISPATARRDINKLDESGKLKKVRNGAEAIS EQRPRWTPMNIHQAQNLDEKVRIARAASQLIAPGESIVINCGSTAFLLGRELCGKPVQII TNYLPLANYLIDQEHDSVIIMGGQYNRSHAITLSPHGSENSLYAGHWMFTSGKGLTAEGL YKTDMLTAMAEQKMLNVVGKLAVLVDSSKVGERAGMLFSQAGQIDVVITGKQADAAILKQ LEDQGVSVIRV >gi|289775105|gb|GG745512.1| GENE 144 163679 - 164395 783 238 aa, chain - ## HITS:1 COG:STM4380 KEGG:ns NR:ns ## COG: STM4380 COG1073 # Protein_GI_number: 16767626 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 1 238 1 249 249 320 65.0 2e-87 MIALEMRNLGGGEILHACPQESLNKPLPCIVFYHGFTSSKLVYSYFAVALAEAGFRVIMP DAPEHGARYQGDEAGRMQRFWPILQQNFREFPALREAIIAEGWLEGERLAVAGASMGGMT ALGIMTHHPELNCVACLMGSGYFRSLSQTLFPSPGFDADSLREWDVSHQLASLARRPLLL WHGDADDVVPPEETFRLEQALRQGDLTARLTCVWQKGVRHRITPEALAATVAFFRQHL >gi|289775105|gb|GG745512.1| GENE 145 164605 - 164913 294 102 aa, chain + ## HITS:1 COG:no KEGG:KPK_5085 NR:ns ## KEGG: KPK_5085 # Name: not_defined # Def: putative biofilm stress and motility protein A # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 102 1 102 102 167 100.0 1e-40 MVMRRFSPWLLAIVLSGCSALQGTPEAPPPATDHPQEIQRNQTAGLQKMATVSVLMYGSP MDVEAALKAKAEAAKADYYVIIMIDDTMVPGQWYSQAILYRR >gi|289775105|gb|GG745512.1| GENE 146 165051 - 165326 312 91 aa, chain + ## HITS:1 COG:no KEGG:KP1_0453 NR:ns ## KEGG: KP1_0453 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 91 28 118 118 160 97.0 1e-38 MKRSFTLPSLLFTAATANTSAQSAEFASADCVTGLNEIGLISVTNLSGSQQDVEHAIARK ADEQGASWYRIIQMYEEQQPDSWRVQAILYA >gi|289775105|gb|GG745512.1| GENE 147 165317 - 166954 2226 545 aa, chain - ## HITS:1 COG:ECs5163 KEGG:ns NR:ns ## COG: ECs5163 COG1960 # Protein_GI_number: 15834417 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 537 6 542 546 870 78.0 0 MHWQTHTVFNQPTPLNNSNLFLSDTALREAVAREGAGWDGDLLASIGQQLGTAESLELGR LANSNPPELLRYDATGARLDDVRFHPAWHLLMQGLCANRVHNLAWQEDARESAFVARAAR FLLHAQVEAGTLCPITMTFAATPLLQHALPAPFRDWLSPLLSDRYDPHLAPGGQKRGLLI GMGMTEKQGGSDVLSNTTRAEKTAEGFYRLVGHKWFFSVPQSDAHLVLAQAPAGLSCFFV PRLLPDGQRNGVRLERLKEKLGNRSNASSEVEFYDACGWLVGEEGDGVRQILRMGGLTRF DCALGSHALMRRAFSVALYHALQRQAFGKNLVDQPMMRQLLGQMALRLEGQTAFLFRLAR AWDRRDDARESAWARLFTPAAKFAICKAGIPFVAEAMEVLGGIGYCEESELPRLYREMPV NSIWEGSGNIMCLDVMRVLSKQPAAMELLAAECAEVKGQNRHLDRAWRQLQQLLRRPAEE QGREIARLVYRLGAGAQMLRHASPPLAEAWCRMMLDTRGGMRLDAPTLDDLLLRAMGRGR QAPQA >gi|289775105|gb|GG745512.1| GENE 148 167313 - 168044 455 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 242 7 246 255 179 39 1e-43 MSEMIYGIHAVQALLERAPERFQEVYILKGREDKRLLPLIHALEAQGVVIQVANRQFLDE KSEGAVHQGIIARVKPGRQYQENDLPDLLAQHDQPFLLILDGVTDPHNLGACLRSADAAG VHAVIVPKDRSAQLNATAKKVACGAAENVPLIRVTNLARTMRLLQEANVWIVGTAGEADH TLFQSKMTGPMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR QRS >gi|289775105|gb|GG745512.1| GENE 149 168127 - 170565 1225 812 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 21 728 4 705 730 476 37 1e-133 MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAIELNIEGEEQIEALRRRLR AMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH GDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPP EDIMGARMGYVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPA VEKQVSGLKEQVPEEAKAGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS SKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQELREHYAPLVKHIEELHNLYKVLESA REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAQEP ALFRIHDKPSTEAITSFRTVLAELGLELPGGNKPEPRDYAELLTSIADRPDAEMLQTMLL RSMKQAVYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQGHKGNSTETG GWHYSMEEMLQLGQHCSMTERRADEATREVSDWLKCDFMQDQVGNTFSGVIASVTGFGFF VRLNDLFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERKI DFSLISSERAPRNVGKTAREKAKKSTSGKPGGRRRQVGKQVNFEPDSAFRKEKDQAKAKP KGEKKAKKPSAKTQKIAAATKAKRAAKKKIAE >gi|289775105|gb|GG745512.1| GENE 150 170602 - 171069 337 155 aa, chain - ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 15 155 1 141 141 262 91.0 2e-70 MSLDIPCFLFPEVYVQLTSFTDYGLRALIYMASLPEGRMTSISEVTEVYGVSRNHMVKII NQLSRMGYVTAVRGKNGGIRLGKPAGQIRVGDVVRDLEPLSLVNCSSEFCHITPACRLKQ ALAEAAQSFLKELDNYTLADLVEKNQPLYKLLLVE >gi|289775105|gb|GG745512.1| GENE 151 171178 - 172476 1492 432 aa, chain - ## HITS:1 COG:ECs5153 KEGG:ns NR:ns ## COG: ECs5153 COG0104 # Protein_GI_number: 15834407 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 833 94.0 0 MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVISIIGNGVVLSPAALMKEMKGLEDRGIPVRERLLLSEACPLILDYHVALDVAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKATFADKLKEVMEYHNFQLVNFYKAE AVDYQKVLDDVMAIADILTGMVVDVSDLLDQARKRGDFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGLGPRYVDYVLGIIKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA TTGRRRRTGWLDAVAVRRAVQINSLSGFCLTKLDVLDGLKEVKICVGYRMPDGREVTTTP LAADNWEGIEPIYETMPGWSETTFGVKERSGLPQAALNYIARIEELTGVPVDIISTGPDR TETMILRDPFDA >gi|289775105|gb|GG745512.1| GENE 152 172579 - 172833 304 84 aa, chain - ## HITS:1 COG:YPO0377 KEGG:ns NR:ns ## COG: YPO0377 COG3242 # Protein_GI_number: 16120712 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 20 84 1 65 66 78 76.0 4e-15 MLADDAREGDDNTFQLGLIMNSTIWLALALVLVLEGLGPLLYPRAWRKMVASLSQLPDNL LRRFGGGLVVAGIVIYYMLRKSIG >gi|289775105|gb|GG745512.1| GENE 153 173000 - 173290 465 96 aa, chain + ## HITS:1 COG:no KEGG:KP1_0445 NR:ns ## KEGG: KP1_0445 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 96 18 113 113 147 96.0 1e-34 MRELTAFEIENVSGAGWLQDGLASLGSKVGAAAWTMGTDALSINLPLIGTLNLADLAPDL GKTLGESVGSTIGGTIESALASLPVIGGLLNKLLGN >gi|289775105|gb|GG745512.1| GENE 154 173373 - 174377 1510 334 aa, chain - ## HITS:1 COG:STM4364 KEGG:ns NR:ns ## COG: STM4364 COG0330 # Protein_GI_number: 16767610 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 530 93.0 1e-150 MRKSVIAIIVIVLVVLYMSVFVVKEGERGITLRFGKVLRDDENKPLVYAPGLHFKIPFIE SVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDVSQAEVLLK RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVSTPAADDAIAKAAE RVEAETNGKVQVINPNSMAALGIEVVDVRIKQINLPAEVSEAIYNRMRAEREAVARRHRS QGQEEAEKLRATADYEVTKTLAEAERQGRILRGEGDAESAKLFADAFSQDPGFYSFIRSL RAYEKSFQSNQDVMVLSPDSDFFRYMRSPDSARK >gi|289775105|gb|GG745512.1| GENE 155 174380 - 175015 742 211 aa, chain - ## HITS:1 COG:STM4363 KEGG:ns NR:ns ## COG: STM4363 COG0330 # Protein_GI_number: 16767609 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Salmonella typhimurium LT2 # 1 211 211 419 419 324 87.0 7e-89 MIRSDTQRELEETIRPYNMGITLLDVNFQTARPPEEVKAAFDDAIAARENEQQYIREAEA YTNEVQPRANGQAQRILEEARAYKTQTVLEAQGEVARFAKLLPEYKAAPEITRERLYIET MEKVLSHTRKVLVNDSKNGNLMVLPLDQMLKGAAAPAAKSDSSDASDLLRLPPASSTGSA STSSTSSSTGGSIMDQRRANAQRNDYQRQGE >gi|289775105|gb|GG745512.1| GENE 156 175005 - 175640 693 211 aa, chain - ## HITS:1 COG:ECs5150 KEGG:ns NR:ns ## COG: ECs5150 COG0330 # Protein_GI_number: 15834404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 205 1 206 419 293 88.0 1e-79 MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGREQGPPDLDDIFRKLSKKLGGLGGGKG GLGGGNNAQTPRGPMGGRIVGIVAAAAVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPG LNWKPTFIDNVQAVNVESVRELAASGVMLTSDENVVRVEMNVQYRVTDPERYLFSVTSAD DSLRQATDSALRGVIGKYTMDRILTRSYCDP >gi|289775105|gb|GG745512.1| GENE 157 175706 - 176986 732 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 50 398 55 407 425 286 46 8e-76 MFDRYDAGEQAVLVHIYFSQDKDMEDLQEFETLASSAGVEAMQVITGSRKAPHPKYFVGE GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHMATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIMQILSRLEK VEKQREQGRRSRAKADIPTVSLVGYTNAGKSTLFNQITAAEVYAANQLFATLDPTLRRID VPDVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNT VLAEIEADEIPALMVMNKIDMLDDFEPRIDRDDENKPIRVWLSAQTGVGVPLLFQALTER LSGEVAQHTLRLPPKEGRLRSRFYQLQAIEKEWMEDDGSVSLQVRMPIVDWRRLCKQEPT LVDYVV >gi|289775105|gb|GG745512.1| GENE 158 177062 - 177370 272 102 aa, chain - ## HITS:1 COG:STM4361 KEGG:ns NR:ns ## COG: STM4361 COG1923 # Protein_GI_number: 16767607 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Salmonella typhimurium LT2 # 1 102 1 102 102 163 91.0 9e-41 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNAGGGSSNYHHGGSAQGSSAPQQDSDDAE >gi|289775105|gb|GG745512.1| GENE 159 177463 - 178368 457 301 aa, chain - ## HITS:1 COG:ECs5147 KEGG:ns NR:ns ## COG: ECs5147 COG0324 # Protein_GI_number: 15834401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Escherichia coli O157:H7 # 1 298 16 313 316 541 92.0 1e-154 MGPTASGKTALAIALRKVLPVELISVDSALIYRGMDIGTAKPDAAELSAAPHRLLDILDP AEAYSAADFRRDALAAMADIVAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQ QAAEQGWNALHQQLQEIDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPY QVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDMPSIRCVGYRQMW SYLNGEIPYDEMVYRGVCATRQLAKRQVTWLRGWEGVHWLDSEQPEQALNKVLQVVGASQ N >gi|289775105|gb|GG745512.1| GENE 160 178406 - 180265 1791 619 aa, chain - ## HITS:1 COG:mutL KEGG:ns NR:ns ## COG: mutL COG0323 # Protein_GI_number: 16131992 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Escherichia coli K12 # 1 619 1 615 615 960 81.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL ARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPTPRQMPENRIAAGGN QFARPSEAREAATRFSITSSREPAASGGSSGGASWPHAQPGYQKQQGALYRQLLDTPAAP RPAQPSAAPAELAGHSQSFGRVLTIVGGDCALLEREGSLALLSLTVAERWLRQAQLTPGT EAVCAQPLLIPLRLKVTEGEKRALAAAQSALTQLGIELHTDALHVTVRAVPLPLRQQNLQ ILIPELIGYLAQQNAFDVGNIAQWMARNLTSEQASWNMAQAIALLADVERLCPQLVKTPP GGLLQPVDLHSAMNALKDE >gi|289775105|gb|GG745512.1| GENE 161 180276 - 181631 1256 451 aa, chain - ## HITS:1 COG:ECs5145 KEGG:ns NR:ns ## COG: ECs5145 COG0860 # Protein_GI_number: 15834399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 441 1 434 445 624 78.0 1e-178 MKYRITTWLAAALMLSSLHATAASLSDIQVSNGDQQARITLSFVGEPEYSFTPQGKRLVA LDIKQTGVLQGLPLQFSGSNLVKSIRAGTPQDTQTLRLLVDLTEDGKTRAVKQQNGANYT VVFTINADAPPPPPPPPVVVKRADPPPVMPSRTATSGRNPFSSSGHERQTAMTSSQPAMT NNQTVTRPAARTVSADDKVIIAIDAGHGGQDPGAIGPNGTKEKNVTIAIARKLRALLNAD PQFKPVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRDATGASVWVLSNRRANS EMAGWLEQHEKQSELLGGAGDVLANSQADPYLSQAVLDLQFGHSQRVGYDVATNVLSQLQ RIGNLHKRRPEHASLGVLRSPDIPSILVETGFISNNGEERLLGSDDYQEQIAEAIYNGLR NYFMQHPLQSAPRGEAAQTASAAAPGGMLIN >gi|289775105|gb|GG745512.1| GENE 162 181648 - 182109 540 153 aa, chain - ## HITS:1 COG:ECs5144 KEGG:ns NR:ns ## COG: ECs5144 COG0802 # Protein_GI_number: 15834398 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Escherichia coli O157:H7 # 1 152 1 152 153 285 88.0 2e-77 MINRVIPLPDEQATLALGDRIAQVCTGATVIYLYGDLGAGKTTFSRGFLQALGHRGNVKS PTYTLVEPYTLENLMVYHFDLYRLADPEELEFMGIRDYFADDAICLVEWPQQGAGVLPDP DVEIHLDYQAQGREARITAISSRGESLLARLAI >gi|289775105|gb|GG745512.1| GENE 163 182102 - 183613 1083 503 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 8 494 3 490 490 421 46 1e-116 MTKNPDSIPYNIWPAEALRLAEREAADSLGLTLFELMQRAGEAAFQLASRAYPASAHWLI LCGHGNNGGDGYVVARLAQAAGRRVTLLAVESDSPLPEEAQAAREAWLNAGGVIHAATIP WPDDISLIIDGLLGTGLRSAPRDPVAALIHQANHHPAPVVALDIPSGLNAQTGATSGAVV QADHTLTFIALKPGLLTGKARDVVGHLHHHALGLERWLAGQSTPLTRFCAAHLADWLPPR RATSHKGDHGKLVIVGGDRGTAGAIRMCGEAALRSGAGLVRVLTHPENVAPIVTVRPELM VDELTPQTLKAALEWADVVAIGPGLGQREWGRSALRTVESFNKPMVWDADALNLLAFNPD KRHNRVLTPHPGEAARLLNVSVAEIESDRLLSAQRLVKRYGGVVVLKGAGTVVASESGAM GIIDAGNAGMASGGMGDVLTGIIAALLGQHLTPYDAACAGCVAHGDAADRLAAREGTRGM LATDLFSTLRRVVNPDVIDVDHD >gi|289775105|gb|GG745512.1| GENE 164 183627 - 184766 1126 379 aa, chain + ## HITS:1 COG:yjeS KEGG:ns NR:ns ## COG: yjeS COG1600 # Protein_GI_number: 16131988 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 379 1 379 379 697 87.0 0 MSQPLDLVQLAQQIKQWGTELGFQQVGIADTDLSASEPKLQAWLDKQYHGEMEWMARHGM MRARPHELLPGTLRVISVRMNYLPANAAFARTLKDPALGYVSRYALGRDYHKLLRNRLKK LGEKIQEQCASLNFRPFVDSAPILERPIAEKAGLGWTGKHSLILSRDAGSFFFLGELLID LPLPVDSPVAEECGRCVACMTICPTGAIVEPYTVDARRCISYLTIELEGSIPEEFRPLIG NRIYGCDDCQLICPWNRFSQLTDEEDFSPRKALHAPPLVELFAWSEAWFLKVTEGSAIRR IGHLRWLRNIAVALGNAPWDEAHLRALESRRGEHPLLDEHIEWAIAEQINKRNADAVEVQ LPKKLRLVRVVEKGLPRDA >gi|289775105|gb|GG745512.1| GENE 165 185699 - 186430 959 243 aa, chain + ## HITS:1 COG:STM4351 KEGG:ns NR:ns ## COG: STM4351 COG0834 # Protein_GI_number: 16767600 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 242 1 244 246 271 54.0 6e-73 MRKVLTVLLLSTLAIGTASAETLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQMQA QCQFTAQRFDTLIPALRFKKFDAVIAGMEVIPMREKQVAFSRPYRQALSGVVIVNKDVAH TFADLKAKKIGVVKGTLHQHYLRNKQKAVQAIPYDDVASALAALKAGEITGVMSDFATLD AWQQENPDYAIMDERATDPAYYGKQYAIAVRKDDTELLNAINDALTAVMATPDFQQMQQK WFK >gi|289775105|gb|GG745512.1| GENE 166 186471 - 187016 843 181 aa, chain - ## HITS:1 COG:STM4350 KEGG:ns NR:ns ## COG: STM4350 COG1949 # Protein_GI_number: 16767599 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 349 93.0 2e-96 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDE WNVRTHTGSGLVDRVKASAVSEHDAELATIEFLKQWVPAGKSPICGNSIGQDRRFLFKYM PQLEAYFHYRYLDVSTLKELARRWKPEILDGFKKQGTHQAMDDIRESVAELAYYREHFIK L >gi|289775105|gb|GG745512.1| GENE 167 187111 - 188172 1003 353 aa, chain + ## HITS:1 COG:STM4349 KEGG:ns NR:ns ## COG: STM4349 COG1162 # Protein_GI_number: 16767598 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 353 9 358 358 642 89.0 0 MSKNKLSKGQQRRVNANHQRRLKTTAEKADYDDNLFGETSEGIVISRFGMHADVESADGS VHRCNIRRTIRSLVTGDRVVWRPGKDAADGVNVKGIVEAVHERASVLTRPDFYDGVKPIA ANIDQIVVVSAILPELSLNIIDRYLVACEAQDIEPLIVLNKIDLLDDDGLRFVNEQMDIY RNIGYRVLMVSSRTQDGLKPLEAALTDRISIFAGQSGVGKSSLLNALLGLNEDQILTNDV SDVSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEAEQITHGFVEFHDYLGHCKY RDCKHDNDPGCALREAVENGKIAESRFENYHRILESMEQVQVKTRKNFSSSDD >gi|289775105|gb|GG745512.1| GENE 168 188333 - 189295 1064 320 aa, chain + ## HITS:1 COG:ECs5139 KEGG:ns NR:ns ## COG: ECs5139 COG0688 # Protein_GI_number: 15834393 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Escherichia coli O157:H7 # 1 319 1 321 322 592 88.0 1e-169 MLNDLKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTAAY RTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGAIEDDKILQAKGHDYSLEALLAG NYQMAGLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFA RNERVICLFDTEFGPMAQILVGATIVGSIETVWSGTVTPPREGIIKRWTWPAGDSEGSVA LLKGQEMGRFKLGSTVINLFAPGQVKLVDSLQSLSVTKIGQPLATAVEASTAAEPAPLPE EEIRAEHRASPLVDDTQDQG >gi|289775105|gb|GG745512.1| GENE 169 189320 - 192649 4012 1109 aa, chain + ## HITS:1 COG:ECs5138 KEGG:ns NR:ns ## COG: ECs5138 COG3264 # Protein_GI_number: 15834392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1109 1 1107 1107 1790 86.0 0 MRLIYTFLLALSLSFGAYAATAPDAKQITQELEQAKAAKPAQPETVEVLQSALNALEEQK SSLERARQYQDVIDNFPKLFQSLRSQLNNLSEEPRQVPTGLTADALNQEILQVSSQLLES SRQAQQEQDRAREIADSLNQLPQQQTDARRQLNEVERRIGTQTGNNALAQAQNLALQAES ARLKALVDELDLAQLSANNRQELSRARSELAQKQSEQLDAYLQALRNLQNSQRQREAEKA LESTELLAENSENLPPDITAQFKVNRELSQALNQQAQRMDLVASQQRQATNQTLQVRQAL NTLREQSQWLGSSNLLGEALRAQVARLPERPRPQQLDTEMAQLRVQRLRFEDLLSKQPQL RQIRQADGQPLTSEQNKILQAQLRTQNELLNSLLRGGDTLMLELTKLKVANGQLEDALKE INEATHRYLFWTSDVSPIGFSWPLEIVQDLRRLISLDTISELGKASAMMLTSKETLLPLF AALLLVGFSISSRRHFTRFLERSSARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLG YGLQSAWPFPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRSRVAKAMRYY LMSIGLIVPLIMALIMFDNLNDREFSASLGRLCFLLICGALAVVTLSLKHAGIPLYLDKE GNGDNMVNRLLWNLMLGAPLVAMLAAAVGYLATAQALLARLETSVAIWFLLLVVYHIIRR WMLIQRRRLAFDRARHRRAEILAQRARGEDEPVHVSSPEGSVETEVSEVDLDAISTQSLR LVRSLLMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV LIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLVGGLVGFSMIGIEWSKL QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATTIS DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPVDADTDEVTKILIAAAHRCSLV IDTPAPEAFLVDLQQGIQIFELRIFAAEMGHRMPLRHEMHQLILAGFREHGIDMPFPPFQ MRLESIDGRQSSKTMTSAGKTSRRTAGSL >gi|289775105|gb|GG745512.1| GENE 170 192687 - 194189 1994 500 aa, chain - ## HITS:1 COG:ECs5137 KEGG:ns NR:ns ## COG: ECs5137 COG0531 # Protein_GI_number: 15834391 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 493 15 507 514 702 79.0 0 MHQQFKKMSLIGLILMIFTSVFGFANSPSAFYLMGYSAMPFYLFSALFFFIPFALMMAEM GSAYRREEGGIYSWMNHSVGPRFAFIGTFMWFASYVVWMVSTAAKIWVPLSTFLFGADKT QTWALASLTPTQTVGILAACWMGVVTFIAVKGINKIAKITAVGGIAVMGLNLVLLLVSGA ILLLNGGHFAQPLNFTLSPNPGYQSGMAMLSFVVFAIFAYGGIEAVGGLVDKTDKPEKNF AKGIIIAAIVISVGYSLAIVLWGVSANWQQVLGARSTNLGNITYVLMTSLGTTLGQALHL TPESAALTGVWFARITGLSMFLAYTGAFFTLSYSPLKAIIQGTPKALWPSVMTRLNVNGM PAAAMWLQCLLVGVFIVLVSFGGDSASAFYNKLTLMANVSMTLPYLFLTIAFPFFKAKMH LDRPFVIFKNRSSTLLATGVVLLVVTFANIFTIIQPVIDSGDWNSTLWMVGGPIFFSLLA LGIYESYRRRMASGALVMES >gi|289775105|gb|GG745512.1| GENE 171 194378 - 195355 1228 325 aa, chain - ## HITS:1 COG:STM4344 KEGG:ns NR:ns ## COG: STM4344 COG2269 # Protein_GI_number: 16767593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Salmonella typhimurium LT2 # 1 325 1 325 325 619 93.0 1e-177 MSETATWQPSAPIPNLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFETRF VGPGHSQGLNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRP CYDMYRLINEVDDLLQQVLECQPAESLSYQQAFQRHLDIDPLSADKTQLREVAAKLDLSN IADTEEDRDTLLQLLFTMGVEPHIGKDRPTFIYHFPATQASLAQISPEDHRVAERFEVYY KGIELANGFHELTDAREQRLRFEQDNRKRAARGLPQQPIDNNLLAALEAGLPDCSGVALG VDRVVMLALGAESIGEVIAFTVDRA >gi|289775105|gb|GG745512.1| GENE 172 195631 - 197421 2089 596 aa, chain + ## HITS:1 COG:STM4343 KEGG:ns NR:ns ## COG: STM4343 COG1053 # Protein_GI_number: 16767592 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Salmonella typhimurium LT2 # 1 596 1 596 596 1128 94.0 0 MQTFQADLAVIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGM KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDLLVDDGQARGLVAMNMMEGT LVQIRANAVVLATGGAGRVYRYNTNGGIVTGDGMGMALGHGVPLRDMEFVQYHPTGLPGS GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR KGNTIPTPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG GIETDQQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAMQRAAQTTE ANSAALDAQAADVEQRLKNLVNQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKL AELQERFKRVRITDNSSVFNTDLLYTIELGHGLNVAECMAHSAIARKESRGAHQRLDEGC TERDDVNFLKHTLAFREADGTTRLEYGDVKITTLPPAKRVYGAEAEAAEKKETTHG >gi|289775105|gb|GG745512.1| GENE 173 197414 - 198148 1096 244 aa, chain + ## HITS:1 COG:STM4342 KEGG:ns NR:ns ## COG: STM4342 COG0479 # Protein_GI_number: 16767591 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Salmonella typhimurium LT2 # 1 244 1 244 244 495 95.0 1e-140 MAEMKNLKVEVVRYNPEVDTAPHSAFYDVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM AICGSCGMMVNKVPKLACKTFLRDYTKGIKVEALANFPIERDLVVDMTHFIESLEAIKPY IIGNNRTPDQGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NEDSRDHGKKERMAQLNGQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT LKPR >gi|289775105|gb|GG745512.1| GENE 174 198159 - 198554 670 131 aa, chain + ## HITS:1 COG:STM4341 KEGG:ns NR:ns ## COG: STM4341 COG3029 # Protein_GI_number: 16767590 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Salmonella typhimurium LT2 # 1 131 1 131 131 199 90.0 8e-52 MTTKRKPYVRPMTSTWWKKLPFYRFYMVREGTAVPTVWFSIVLIYGLFALKHGAESWAGY IGFLQNPVVVILNLITLAAALLHTKTWFELAPKAANVIIKGEKMGPEPVIKGLWVVTAVV TVVILFVALFW >gi|289775105|gb|GG745512.1| GENE 175 198565 - 198924 573 119 aa, chain + ## HITS:1 COG:ECs5132 KEGG:ns NR:ns ## COG: ECs5132 COG3080 # Protein_GI_number: 15834386 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 191 87.0 3e-49 MINPNPKRSDEPVFWGLFGAGGMWGAIVAPVMVLLVGILLPLGLAPADAFSYERVLAFAQ SFIGRAFIFLMIVLPLWCGLHRIHHAMHDLKIHVPNGKWVFYGLAAILSVITLVGVLFI >gi|289775105|gb|GG745512.1| GENE 176 199038 - 199571 652 177 aa, chain + ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 1 174 1 174 177 285 71.0 4e-77 MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKV TIAWHPRDDGGLDVVNKGYNPDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIA LDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIATRQGFDVSKLIWVNQRYN >gi|289775105|gb|GG745512.1| GENE 177 199568 - 199885 329 105 aa, chain - ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 144 84.0 3e-35 MSWIVLFIAGLLEVVWAVGLKYTHGFSRLVPSVITIVAMVVSMALLSWAMKTLPVGTAYA VWTGIGAVGAAVTGIVLLGESASAMRIASLACIVVGIIGLKISAH >gi|289775105|gb|GG745512.1| GENE 178 200539 - 201105 597 188 aa, chain - ## HITS:1 COG:Zefp KEGG:ns NR:ns ## COG: Zefp COG0231 # Protein_GI_number: 15804739 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 EDL933 # 1 188 1 188 188 374 97.0 1e-104 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTD SAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNG QPIAVTPPNFVELEIIETDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|289775105|gb|GG745512.1| GENE 179 201147 - 202175 1056 342 aa, chain + ## HITS:1 COG:ECs5127 KEGG:ns NR:ns ## COG: ECs5127 COG1509 # Protein_GI_number: 15834381 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 616 85.0 1e-176 MAHIVTLNTPSREDWITQLANVVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFI ARMEKGNPNDPLLRQVLTAEEEFIVAPGYSTDPLEEQHSVVPGLLHKYHNRALLLVKGGC AVNCRYCFRRHFPYAENQGTRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMT QLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAM AMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSD DEAREIMRELLTLISGYMVPKLAREIGGEPSKTPLDLGLKQR >gi|289775105|gb|GG745512.1| GENE 180 202297 - 202941 90 214 aa, chain - ## HITS:1 COG:STM3759 KEGG:ns NR:ns ## COG: STM3759 COG3710 # Protein_GI_number: 16767043 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 11 111 35 136 285 95 48.0 9e-20 MDDAVLFNGCIINQEIIFNANMNELRPLAGDGECISLNAPTARCLLLLLQNCGKVISRDE FLAAVWETRGVVVSQNTFYQNISLLRKSLVKAGLSEDIIITVRQKGFSVAPNTLVIPLSD EECENMNRVTLTHYQNNKVVGFISEDKEKPDTHLNLPLIENSSNHGSDLMANKTEEGEKV SERLHVTFKIPIWLIALIVVMIVINIIVLVVLNR >gi|289775105|gb|GG745512.1| GENE 181 203422 - 203985 510 187 aa, chain + ## HITS:1 COG:no KEGG:KP1_0412 NR:ns ## KEGG: KP1_0412 # Name: fimA # Def: type 1 fimbrial protein precursor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 186 1 186 187 235 97.0 8e-61 MKKTIVAVMVAASAVLSAQAMATNTAQVTVLGEVSDASNSCVVTPTGTLNNGIVQLITVT TTEANAEAAGKLFKTQDFGFEVKDCAQGSTNPVTGVTVNVSGTSSSDATILDNTAANGAA GIGIGIQRVSDAHRVAFDGSDTMSESYSATNGTQLKYTTGYVRTNAATPVTEGPVKGVAT FTIDYTN >gi|289775105|gb|GG745512.1| GENE 182 204044 - 204730 645 228 aa, chain + ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 18 221 17 220 227 152 40.0 4e-37 MFRTLLNLTASCALLLSSIAHAGIVVESTRYLYKEGAREITAQIENKDDIPYLIKSWVET PAGKAPSFMATPPLFRLEGKQQNTVRLFATGNVNAPTDRESMYYFNVMAIPPADDAKANN NTIQLAVRHRMRLVYRPKTLFDLSPNTEAKKLEWRKAGKKLTIKNPTPFFFYFNSIQIGG KEVKPEVNSVAPMTTKEVTLKENINASSITWKVVNDYGGAGSLYSSSL >gi|289775105|gb|GG745512.1| GENE 183 204985 - 207300 1952 771 aa, chain + ## HITS:1 COG:STM4593 KEGG:ns NR:ns ## COG: STM4593 COG3188 # Protein_GI_number: 16767834 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 3 756 69 828 845 638 42.0 0 MFNGRYLDTRTIKFVANNRASSDNREPALVPCLSLKTLAEYGVRIKAFPELAEDKNGCAN FSVIPDTKADFDFTAQRLNISIPQAALSTTAQGYIPPDQFDDGINALLVNYQFSGSNDMQ ANDEYYSLNLQSGLNVGPWRIRNLSTWNKNNSGAGDWDSAYLYMQRSIRPINSNLVMGES SSLSTIFDSVPFTGIQLATDTSMLPESMRGYAPIIRGIAKTNARVTIKQNGYQVYQTYVA PGAFEITDMYPSGGSGDLYVSVEESDGSKQEFVVPFATLPVMVREDQLEYEITSGKYRPY DGGVDETPFTQATATYGVSSSLTLYGGMQAASRYQALSTGLGYNLGELGAASADVTQAWS KMKDDEKTSGQSWRVRYGKNIVETGTNVTIAGYRYSTRGFHTLSEVLDSYSNDGYYTSRS LRNRTNLTVNQSLGKGLGSLSISGLIEDYWDDKRTNKSISVGYNGGFRNVNYYLGYSYNR YTWGGDNSGKDAQDDQRITLTVTLPLSNWLPGTYTSYQLTNSNPGSTDQSVSIGGNALEN DSLEWSLQQGYSNREYYSGDMRATYNGARGSVNAGYSYDRSSERIDYGANGSIVAHADGI TLGQDITDAAVLVKAPGLDNVKLTNDNTISTDYRGYAIVPYVTPYRRTDITLDSSTLGED MELPETTQSVVPTRGAIVRANYAGNIGRRALIQLEMPGDKPVPYGSTVTIKNSANTQANI VSDEGMVYLSGLQDSGELLVLWGQRQDQRCNATYQLLPTQGSLTTSKAICR >gi|289775105|gb|GG745512.1| GENE 184 207866 - 208327 -8 153 aa, chain + ## HITS:1 COG:no KEGG:KP1_0409 NR:ns ## KEGG: KP1_0409 # Name: not_defined # Def: putative fimbrial subunit protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 9 153 237 386 386 111 44.0 1e-23 MKFVSPVPRENSCEITSTKTVNLSRIDKVTLLSTSPGSKTSKEKSFTLNINCEQKSTGNT IYYWFNPRSSTDGTPGVLLNSDPTSSGGAQNVNTIIKENGIPVNFYDYEAKSFIVDANKL NKEINLTADYYRTTDDITIGTVRGLLEVVIQEE >gi|289775105|gb|GG745512.1| GENE 185 208589 - 208954 311 121 aa, chain + ## HITS:1 COG:no KEGG:KP1_0406 NR:ns ## KEGG: KP1_0406 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 120 1 120 122 64 45.0 1e-09 MRELNVFEMQEISGGYSWDTSSFMSTLTSLVTNGVEAVGSAIAFGTVAAMWGAFAAGGKA GDGGGILGFGIIAELGGVIFGAIGGFIGGGVSGIALGWEQTVKYIADSYTSALDGTFTPW A >gi|289775105|gb|GG745512.1| GENE 186 209659 - 210303 149 214 aa, chain + ## HITS:1 COG:YPO0099 KEGG:ns NR:ns ## COG: YPO0099 COG0845 # Protein_GI_number: 16120446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 1 214 197 411 411 199 47.0 2e-51 MQLESQITQYNSDKITKIADFDNQITAQQNQINDFKNQLVESNAKGNAIIKATTEGRIES LSVTKGQMVDNGSSLAQIKPTGNIEYYLILWLPNNSIPYVKPGDVINIRYDAFPSDKFGQ FPGEVISISSVPAPRQEMSEYTNVSNGTNQQELALYKTIVKIKNKTFSYNGKTLKLSNGL KARAVVFLEKRPLYMWMFTPFYKMSQSVSGPIHD >gi|289775105|gb|GG745512.1| GENE 187 210494 - 212419 960 641 aa, chain + ## HITS:1 COG:PA4143 KEGG:ns NR:ns ## COG: PA4143 COG2274 # Protein_GI_number: 15599338 # Func_class: V Defense mechanisms # Function: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain # Organism: Pseudomonas aeruginosa # 3 636 63 697 719 555 42.0 1e-157 MSLSKTADHAGLKSRALSLDLNEIRQLKLPCILHWGMNHYVVLTKVRKSSFIVHDPALGK RVIGNQEMSNYFTGIALELWPDQNFQQEKAKSRLRLLDLMRNIIGLKSTLLKIFAFSVVV EAIGLLLPIGTQLVTDHVIMAHDQSLLSVICIGLVFFTLFRTFISMLRAWTSLTLNTLTN IQWKTTLFDHLASLPLSFFEKRHLGDIQSRFSSLDTIRSTFTNSIVSGIIDSIMTIGLLI MLTLYGGWLTWVVVGFTLCYAIMRFATYRFYRRVAEEQVIKGARSSSHFMESLYGISTIK ALNLKERRSQHWLNINIEACNAGIKQTRFDMMFGGINTFITTIDQVAVLWLGAIMVIDNN MTLGMFMAFNAYRGQFSQRASSLIDLCMQLRMLSLHNERLSEIVFSEPEQELPAREVFSA DSGAKLEVKNLCYQYDPFSQPIFSNLNITVEPGESVALIGPSGVGKTTLLKVMCGLLSPT SGDVLADNLDITKIGLNNYRHGTACVLQEDRLFSGSLIDNISGFEDNADIDFVMECARRC NIHDEIMKMPMGYETIVGELGLGISGGQKQRILIARALYRKPSILFMDEATSHLDLKNES VINQSISALSITRIIVAHRPSTIASADRVIDLSQTKTVAPA >gi|289775105|gb|GG745512.1| GENE 188 212433 - 213296 491 287 aa, chain + ## HITS:1 COG:no KEGG:KPK_5135 NR:ns ## KEGG: KPK_5135 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 286 1 286 287 476 91.0 1e-133 MQGTFIGFNTAGITFENRFMALLLKIKQENGFCQQYYLQAPIVLDLLLILQNRLLVTFKS LQDQGETYKEKLIAYNESLIANIPAVEMTEIQQPNPERRIMSITHKPDETGSTLILVLQN EQVCTLCIEDRQVEALLAGIQYTLKTVGDQAFIQYLSSNLEFLMCYAVDLTTQPNIDYQQ YPQEEWKLNLFSHYLGVLYCCETDEGKKIVSGAVVKTSAPHLSELENNVVMQLIEKSPKL KAMHAELAPCQIFSTIIPSQPGRMLSLEECLRPLHAFYLEKKAELSV >gi|289775105|gb|GG745512.1| GENE 189 213351 - 213704 289 117 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4717 NR:ns ## KEGG: Kvar_4717 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 117 1 117 117 194 100.0 8e-49 MQVKYLAGIVGAALLLAGCSSSNELTSAGQNVRFVQEKPGAECQLLGTATGKQSNWLSGQ NGDEGGSMRGAANALRNQAAAMGGNVIYGVSSPTQNLLSSFVPTDSEMNGQVYKCPN >gi|289775105|gb|GG745512.1| GENE 190 213965 - 215611 2372 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 548 1 547 547 918 87 0.0 MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLEDELDVVEGMQFDRGYLSPYFINKPDTGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVAQIRKQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALV RVAAKLAGLTGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGNYGYNA ATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG MGGMGGMM >gi|289775105|gb|GG745512.1| GENE 191 215649 - 215942 356 97 aa, chain - ## HITS:1 COG:STM4329 KEGG:ns NR:ns ## COG: STM4329 COG0234 # Protein_GI_number: 16767578 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Salmonella typhimurium LT2 # 1 97 1 97 97 154 96.0 4e-38 MSIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEIIAVGKGRILENGTVQPLDVK VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA >gi|289775105|gb|GG745512.1| GENE 192 216175 - 217425 1368 416 aa, chain + ## HITS:1 COG:ECs5122 KEGG:ns NR:ns ## COG: ECs5122 COG0531 # Protein_GI_number: 15834376 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 410 1 410 418 583 84.0 1e-166 MSGLKQELGLGQGVGLLSTSLLGTGVFAVPALAALVAGDNSLWAWPLLILLVFPIAIVFA LLGRHFPSAGGVAHFVDMAFGPRLASVTGWLFLSVIPVGLPAALHIATGFGQALFGWHDA QLLLAELGTLAIVWWIGSRGASSSANLQTLVAVLIVALIVAVWWRGGISPAQIPFPALTE IDHGQLFSALSVMFWCFVGLEAFAHLASEFKHPERDFPRALMIGLLLAGSVYWACTVLVL HFHAFGEEMAAAASLPNIVVRLFGVEALWVACVIGYLACFASLNIYIQSFARLVWSQAQH KPESYLARLSPRQIPRNALNAVLGSCVVSTLCIYLLDINLDALIVYANGIFIMIYLLCML AGCRLLRGRYRLLAVVGSILCLLLLAMVGWKSLYALVMLAGLWLFLPRRKLATGSV >gi|289775105|gb|GG745512.1| GENE 193 217477 - 217953 553 158 aa, chain - ## HITS:1 COG:STM4327 KEGG:ns NR:ns ## COG: STM4327 COG3030 # Protein_GI_number: 16767576 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Salmonella typhimurium LT2 # 1 158 14 171 171 234 90.0 5e-62 MRWIPFIAFFLYVYIEISIFIQVAHVLGVFMTLILVIFSSVVGMSLVRNQGFKNFLLMQQ KMAAGESPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTMKLMPHLRFSR MPGGGFSAGTGGGETFEGEFQRKDQQRDRLDHKDDPRD >gi|289775105|gb|GG745512.1| GENE 194 218292 - 219728 1849 478 aa, chain + ## HITS:1 COG:YPO0348 KEGG:ns NR:ns ## COG: YPO0348 COG1027 # Protein_GI_number: 16120683 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Yersinia pestis # 1 478 1 478 478 863 89.0 0 MLNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNSKISDIPEFVRGMVMVKKAAAL ANKELQTIPKSAANAIIAACDEVLNNGKCMDQFPVDVFQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYASILKLIDAIKQLGEGFQAKAVE FQDILKMGRTQLQDAVPMTLGQEFHAFNVLLNEETKSILRTAELLLEVNLGATAIGTRLN TPDGYQQLAVQKLAEVSNLPVVPAEDLIEATSDCGAYVMVHSSLKRLAVKLSKICNDLRL LSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMASEAGQLQ LNVMEPVIGQAMFESIHILTNACYNLLEKCVNGITANKAVCEGYVYNSIGIVTYLNPFIG HHNGDIVGKICAETGKSVREVVLERGLLTAAELDDIFSAQNLMHPAYKAKRYTDESEQ >gi|289775105|gb|GG745512.1| GENE 195 219844 - 221145 1842 433 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 448 62.0 1e-126 MFGAELVIVLLAIYLGARLGGIGIGFAGGLGVLVLTLIFQIKPGAIPFDVIEIIMAVIAA IAAMQVAGGMDYLVSLAERMLRRHPKYITFLAPLVTWFMTVLAGTGHTAFSTLPVITEVA KEQGIRPSRPLSIAVVASQIAITASPISAAVVFFAGILEPLGVSYLTLLAICIPVTLLAV MLTAIVCNFLGCELKDDPIYQERLAKGEVRLRGSQVFELKPHAKRSVLLFLIGIVAVMFY ATAISDTVGLIKNPVLPRNEAIVVFMLTIATLISITCKIDTGEVLNASTFKSGMSACVCV LGVAWLGDTFVKAHISDIQAVAGDLLHNYPWLLAVVLFFAATLLYSQAATTKALMPAALL LGVSPLTAIASFAAVSALFVLPTYPTLLAAVEMDDTGSTRIGKYVFNHAFLIPGVIAITL CVILGFIFGGIML >gi|289775105|gb|GG745512.1| GENE 196 221271 - 221594 408 107 aa, chain + ## HITS:1 COG:STM4324 KEGG:ns NR:ns ## COG: STM4324 COG1324 # Protein_GI_number: 16767573 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Salmonella typhimurium LT2 # 1 107 9 115 115 174 86.0 4e-44 MTTPDAVVVLCTAPDEATAQDLAAKALADKLAACATLLPGATSLYYWEGKLEQEYEVQML LKTDLAHQQALLDCLKSHHPYQTPELLVLPVIHGDNDYLSWLTASLR >gi|289775105|gb|GG745512.1| GENE 197 221570 - 223366 1672 598 aa, chain + ## HITS:1 COG:dsbD KEGG:ns NR:ns ## COG: dsbD COG4232 # Protein_GI_number: 16131961 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Escherichia coli K12 # 1 597 1 564 565 860 75.0 0 MAYRIITLILLLCSTSATAGLFDAPGRSNFVPADQAFAFDFQQQQHDVNLSWQIKDGYYL YRQQFTFRAAGATIDEPALPAGEWHQDEFYGKSEIFRQRLTVPVTVKQAEKDATLTVTWQ GCADAGFCYPPETKVIPLSAVLATSADGQATAIEPMPSTSSRPAFNPPLPVEPRPAPELA TSPAPAAVPPADTPARLPFTALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARA LLLAFIYVQGMALTYTALGLVVAAAGLQFQAALQHPYVLAGLSVVFILLALSMFGLFTLQ LPSSLQTRLALLSNKRQGGSPGGVFAMGAIAGLICSPCTTAPLSAILLYIAQSGNLWLGG GTLYLYALGMGLPLILVTVFGNRLLPKSGPWMSHVKTAFGFVILALPVFLLERIVGDPWG LRLWSMLGVAFFSWAFITSLGATRPWMRLVQIILLAAALVSARPLQDWAFGAPAVEQQAH LTFTRVNSVAELNQALAQAKGQPVMLDLYADWCVACKEFEKYTFSSPDVQQALKGTVLLQ IDVTKNSPQDVALLKHLQVLGLPTILFFNAEGQEQPERRVTGFMDAAAFSAHLRDWQA >gi|289775105|gb|GG745512.1| GENE 198 223402 - 223977 782 191 aa, chain + ## HITS:1 COG:ECs5116 KEGG:ns NR:ns ## COG: ECs5116 COG1309 # Protein_GI_number: 15834370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 3 191 11 199 199 295 77.0 3e-80 MLREDVLAEAIKILEIEGIANTSLEMVAERVSCPTSDLKRFWPDREALLYDALRYLSQQV DAWRRQLLLDDTLSAEQKLLARYAALTTCVSNHRYPGCLFIAACTFYPDPQHPIHQLAEQ QKQASLAYTHELLTQLEVDDPEMVAKQMELIVEGCLSRLLIKRSQTDVDTARRLAEDILR FAQCRMGGALT >gi|289775105|gb|GG745512.1| GENE 199 224045 - 226132 2417 695 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4727 NR:ns ## KEGG: Kvar_4727 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 695 1 695 695 1382 99.0 0 MRAFFWAAWLGLCSTPLLAAPLQGFSFTQKDWELACDNTGTCRAAGYGVRMGEVSVLLTR NAGSEQRLAATATFAQIEHDIPADSTASLLIDDRDLGALDAQDDSHFRLDSDQTAALLQA LANQRKIEFTLNGQHLPLSSAGSREVLGKMDAFQRRTGTADALLDKGDAGDDAILPATAA PEIIAAPVIHNAQPVALSILQRQKLLPSLTPLLNQRCDDWQNPAIPAAERQITLTALDKT HSLVQALCWRAPYNDGYALWLVDNAQLNKPRLLTTEASSYANGTIVFLHKERGIADCLTG ETRVWDGKTFTPSLKYSTGMCREITPGGTWMLPTFVSQVIPRQQKEADNLALRTLYNAVL KAQKSDPELSLNKVAEQFPLTGHITDFTLTYADDTLVSTSKPSPDISDDEWQAFLRSSIS ADSENGKVSFTLIDLDGDGKRDLIIDSYVGGTGLFSYTGVLRRGDNDFAAVDGSDSDNGD DFDAGVPGALFSINGRGANQWNHWVKINGQVYALWYNGQFGEDNLYLLRPFSTASQTPAV TVRYRYTLNSIRSPEKDQPLTPPLSDSDKVDLLRSLEVMQGSLLKDKPVSDNDAPICPIP PGTSADEADNYYSGVAINYIYETVAYIPVWLNGKCYIGTIFSHHGAYRHGVDAEITLSSP REDEEVIGDYIISGLRHVIAITSGWKTREGDNGMQ >gi|289775105|gb|GG745512.1| GENE 200 226754 - 226963 222 69 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4728 NR:ns ## KEGG: Kvar_4728 # Name: not_defined # Def: PerC transcriptional activator # Organism: K.variicola # Pathway: not_defined # 1 69 28 96 96 125 100.0 7e-28 MQRCLNDDDREWIRHHRNQCLKKAQRPPAPKEEFADLHQAAKETQYRMGIAKPYGEAFRL PGKGKTAAE >gi|289775105|gb|GG745512.1| GENE 201 227356 - 227934 293 192 aa, chain - ## HITS:1 COG:no KEGG:KPK_5150 NR:ns ## KEGG: KPK_5150 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 192 7 198 198 357 98.0 2e-97 MATSMILVTQDYYLFQGVKNFFPDIIQLDSSGKTILDNEVDEVSLLVDSRSPLCHYDYLV MEAAQSRKRICCIVLDMRHREEHLLSLKSFLNMSLSPADMATLFGLFLEMKSKRLTKEWF DDLRLSLSEQLMLRLLGAGMTMEEVAVNLNTSVKSLYRKRTALYERLGLDNFNEACLFIF RNKLLEHSIRSP >gi|289775105|gb|GG745512.1| GENE 202 228555 - 231002 2406 815 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4730 NR:ns ## KEGG: Kvar_4730 # Name: not_defined # Def: outer membrane protein PgaA # Organism: K.variicola # Pathway: not_defined # 1 815 15 829 829 1468 99.0 0 MERSPYSNTLLFNRNTKLSLSIGLLLLFPALVQGADSLYDQQILQARQGQYAPFLSYLQQ YQLRHALTPSQVADWLQVALWAGQDDEVVKVWRRYQVYMPLPARGTAAAAQALRNQKQWQ ASLTLWQQALSQAPDSDDYRIGYIKTLADARKDGEALSEARRLVAEQASVAHLQTLSYVY LRLGKSWDQLLVDTQILDREPQNKAALASLMATLTRNRIDSPALGLANSVELTPAEKRNL QLNAAAELVRLADTPSREENARYALARTALAQYDAMIAAWHPDPQAAPDIIRARIDRLGA LYANADYAQVIREYQNLIAQQQTVPDWAIGWVISSYIALKQIEPALTLIHQHPSWLTSQQ NEEHELFYALLDTGQYPAAQQYVARLTRNAPYIRRLYGSPTPQPNDDWLTAQSLNVHYLA ATNALPQAEARMQRLAATAPGNQGLQIDYAALLQDRGLPRAAESQLKAAESLEPASLQLE RQQAWVALDLQEWRQMDLLTDDVVARSPRDLNTQRLARAREVHHLSELRLSVGKGLHSDN PVSGTHDLSFETAIYSPPLADSWRLFGGHRFAEGNFEEGKGSRRQLFAGVEWRPRDYWGE LELSSVNFHGENKPGVRLSAAHDVSDRWQLGGELERISQQTPLRALRNGVSANRGEGWLR WYQNERREYRVSVAASRFTDRNRRQEYTLSGKERLWQTPWLTLDLQPGLSASANSRTDTA YYSPARDLAATAALAVDHTLYQRYDTVWSQQLLAGGGSYWQKNHAAGAITVLGYGQRLRW NNVVDTGVMLNWDKRPYDGKRENNLAITLDANIRF >gi|289775105|gb|GG745512.1| GENE 203 231005 - 233026 2115 673 aa, chain + ## HITS:1 COG:YPO1952 KEGG:ns NR:ns ## COG: YPO1952 COG0726 # Protein_GI_number: 16122198 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Yersinia pestis # 26 673 24 672 673 768 57.0 0 MTMLNTTLRNGLMLLVWLCLIFSVRAEEVPFLAPQQRPQPEANQPWPADRFLVLAYHDVE DDAADQRYLSVRTSALNEQIAWLLHHGYHAVSVQDILDAHHGVKPLPAKAFLLSFDDGYS SFYTRVWPLLKAWNVPALWAPVGSWVDTPAGQPVNFGGLMTPRERFATWEMVRELSRSPL VEIGAHTWASHYGLPANPQGSREPAAANRGWDKTTGRYESDAQFTRRMADDVQKVTAKIH EVAGKAPRAWVWPYGATSGSTLAIAKQQGYQLAFTLNDGLGNVKDLDNIPRMLIAGNPSI KAFANAVTQIQEADPVRVMHVDLDYVYDPNPVQQAKNIDKLVQRVYDMKISHVFLQAFSD PQGDGTVKSLYFPNRWLPMRADLFNFVSWQLQTRGGVKVYAWMPVLAFDLSSDLPRVQRW DPQTGKALLARQPYVRLSPWDPRVRQQITDIYEDLARHASFSGILFHDDAVLTDFEDVSP EAVAAWRQTGLGHDAGPVPQRPQERQAWMRFKSQTLTRFTLDLRQAVQAIRGPQVKTARN LFALPILEPQSEAWFAQNLDDFLAAYDWTVPMAMPLMESVPIDASQAWLTRLVQAVASHP GALKKTIFELQARDWNRRQQNAIPDQQLADWMRLLRLNGVKNYGYYPDDFINNQPDISRI RPQFSSWWYPDHD >gi|289775105|gb|GG745512.1| GENE 204 233019 - 234347 1484 442 aa, chain + ## HITS:1 COG:YPO1953 KEGG:ns NR:ns ## COG: YPO1953 COG1215 # Protein_GI_number: 16122199 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Yersinia pestis # 1 442 1 442 444 645 71.0 0 MTDRIIALCILCLVFGLPLGVAAVFTGELILDFVFFWPLFMSVLWITGGLYFWFQLERHW PWGEDTPPPTLPGNPLISILIPCFNEEKNARETISAALAQRYANLEVIAINDGSSDNTAQ VLQQLAQEEPRLRVIHLAANQGKAVALKAGAAAARGDLLVCIDGDALLDRDTAAWLVAPL IHYPHVGAVTGNPRIRTRSTLIGRIQVGEFSSIIGLIKRTQRIYGRVFTVSGVIAAFRRQ ALADVGYWSPDMITEDIDISWKLQLRHWDIFFEPRALCWILMPETLKGLWKQRLRWAQGG AEVFLVNLRRLFHWEHHRMWPLFLEYACSTLWAFAYAVTILLFILSRLMPLPDNLAVHSL FPPEFTGMLLGVMCLLQFVASLYIERRYEKKVAKSLFWVIWFPMVYWMIGLLTTLVAFPK VMVKRQRSRARWVSPDRGKGSL >gi|289775105|gb|GG745512.1| GENE 205 234347 - 234796 478 149 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4733 NR:ns ## KEGG: Kvar_4733 # Name: not_defined # Def: biofilm PGA synthesis protein PgaD # Organism: K.variicola # Pathway: not_defined # 1 149 1 149 149 249 100.0 3e-65 MNENTLILTEHRVLPRLVDAGLTLLAWLGFLFFLYANLLMQFIAPPSPRWESLMASLNTA LVYLLIAALNGWLLILWYHYNRRRARTRHHTAVLTLRHDELASSFNVAPQIISEMSRYNL LTVYHDQIGQIIDLKSHALPPPQEESERA >gi|289775105|gb|GG745512.1| GENE 206 234843 - 235628 1111 261 aa, chain - ## HITS:1 COG:STM0028 KEGG:ns NR:ns ## COG: STM0028 COG1651 # Protein_GI_number: 16763418 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 38 261 50 281 281 154 42.0 2e-37 MSGHKKYLSVALLSAVLLPAMASAADAPATFTPEQEAKIGKIAADYLVAHPEVLLQASQK LQQIQAEQQASAATQAVLKNAAVLTQDKNTPTYGPANGKVTVIEFFDYQCVYCSRLAPVM EQVIKAHPQTRFAFKEWPIFGGRWESSLEAAKTGLQIYQQKGADAYLAYHNGIYATGHNE GKLTTADIQQQAKKAGFDAKKATDVEPVLQSINDLAQEIGLSGTPGVIVMPTTGATEASI TVFPGLADQASLEAAIKKAGG >gi|289775105|gb|GG745512.1| GENE 207 235853 - 236536 830 227 aa, chain + ## HITS:1 COG:PA1170 KEGG:ns NR:ns ## COG: PA1170 COG0861 # Protein_GI_number: 15596367 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Pseudomonas aeruginosa # 14 216 14 220 244 162 54.0 4e-40 MNALLQQWDMAVIMLQIVAIDLLLGGDNAVVIAMACRKLPPQKRTKAIIIGTVGAILARV LLLALALYLLSLPWLKIVGALLLLWIGMKLVSNEEEESEVGSSASLWRTAITITVADVIM SLDNVLAVAAAGKGHIALVALGVAISIPIIVAGSKLVLVLLTRFPAVVLLGGMLIGWIAG SMLVSDPTIQQLFPAAGDGTARVAGAVGALLVLFEGWRRRPRPQAKE >gi|289775105|gb|GG745512.1| GENE 208 236682 - 237599 1187 305 aa, chain + ## HITS:1 COG:ECs1155 KEGG:ns NR:ns ## COG: ECs1155 COG2214 # Protein_GI_number: 15830409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli O157:H7 # 1 305 1 306 306 507 82.0 1e-143 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKESDAEAKFKDLAEAWEVLKDEQ RRAEYDQLWQHRNDPGFGRQQQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLE IEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGT PGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTV PPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAAAEASFDPRK TWGKA >gi|289775105|gb|GG745512.1| GENE 209 237599 - 237904 480 101 aa, chain + ## HITS:1 COG:no KEGG:KPN_04508 NR:ns ## KEGG: KPN_04508 # Name: yccD # Def: chaperone-modulator protein CbpM # Organism: K.pneumoniae # Pathway: not_defined # 1 101 6 106 106 181 99.0 9e-45 MATVTVTFTITELCLRTGVSEEELTEIVGLGMIEPHQPQAETWLFDDSAVTIVHRAVRLR NELELDWPGIAVALTLLDENARLTRENRLLQQRLARFLAHG >gi|289775105|gb|GG745512.1| GENE 210 238408 - 238779 354 123 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4738 NR:ns ## KEGG: Kvar_4738 # Name: not_defined # Def: plasmid stability protein, StbB # Organism: K.variicola # Pathway: not_defined # 1 123 1 123 123 156 99.0 3e-37 MTLDRRKVLIYLRPDISASERFADAKIEAHHRGDRGDMSRTALLAGLALGEVDSRLPSML AALLAEDTKPETLRKMLASFLEIQPASSAPAAAPAAAPAKAPEPPAPVSESVSARNLAGS LPD >gi|289775105|gb|GG745512.1| GENE 211 238789 - 239745 1268 318 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4739 NR:ns ## KEGG: Kvar_4739 # Name: not_defined # Def: StbA family protein # Organism: K.variicola # Pathway: not_defined # 1 318 1 318 318 628 100.0 1e-179 MRIFIDDGSTNIKMLWEQDGETFTHISPNSFKRGWSATFGSGKPFNYTVDDEKYSFDLIT PDALPTNNIDWQYSPLNSIAVHHALLTSGLEPQDVEIVVTLPLTEFYDEDAQYRLDNIER KKKSLLRDVKLNKGVVFNITKVTVRPESIPAGISLCDELKPSHSVLIIDLGGTTLDISMV AGQMTSVSRIYGDPKLGVSLVTDAVKLALARANTDTSSYNVDQIIINRHDEEYLTDNIND PDAVSEVKKVINNSIERLTTRVLTAIDSFKGYSHAIVIGGGAPLVADAIRERMGLREDRF VVAEEPQFALVRGLKIIG >gi|289775105|gb|GG745512.1| GENE 212 240021 - 241424 1935 467 aa, chain - ## HITS:1 COG:ECs5102 KEGG:ns NR:ns ## COG: ECs5102 COG2211 # Protein_GI_number: 15834356 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 461 1 461 469 696 79.0 0 MTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGW IVNCTRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMD VPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVSAVGGADRGFGFQMFTL VLIAFFVISTLVTLRNVHEVYSSDSGVSEDSSHLSLRQMVALIYKNDQLACLLGMALAYN TAANIIAGFAIYYFTYVIGSAEMFPYYMSYAGAANLLTLILFPRLVKGLSRRILWAGASI MPVLGCGVLLLMALSGVYNIALISLAGVLLNIGTALFWVLQVIMVADTVDYGEYTMNIRC ESIAYSVQTLVVKAGSAFAAWFIAIVLGIIGYVPNVVQSSHTLLGMQAIMIALPTLFFAL TLFLYFRYYKLNGDMLRRIQIHLLDKYRRVPENVVEPERPIVVPNQV >gi|289775105|gb|GG745512.1| GENE 213 241530 - 242882 1911 450 aa, chain - ## HITS:1 COG:melA KEGG:ns NR:ns ## COG: melA COG1486 # Protein_GI_number: 16131945 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 450 2 451 451 858 87.0 0 MTAPKITFIGAGSTVFVKNILGDVFQRPALKSAHIALMDIDETRLEESHIVVRKLMDSVG ANGEISCHRDRKTALQGADFVVVAFQIGGYEPCTVTDFTVCKRHGLEQTIADTLGPGGIM RALRTIPHLWAICDDMTEVCPDATLLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAE ELARDLDLDPADLRYRCAGINHMAFYLSLEKKLADGSYVSLYPDLLQAYAEGRAPKPNLH GNPRCENIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGRDDLIAHYKVPLDEYPKRCVE QLANWHQELESYQRGERIEVKPSREYASTIMNAIWTGEPSVVYGNVRNDNLIDNLPQGCC VEVACLVDANGIQPTKVGELPAHLAALMQTNINVQTLLTQAILTENRDYVYYATMMDPHT AAVLGIEEIYALVDDLIASHGDWLPAWLHR >gi|289775105|gb|GG745512.1| GENE 214 243122 - 244060 1288 312 aa, chain + ## HITS:1 COG:STM4297 KEGG:ns NR:ns ## COG: STM4297 COG2207 # Protein_GI_number: 16767547 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 8 307 9 308 310 523 85.0 1e-148 MEHRFTSLPPDPFMCSSDEKQSRSPLALYSEYQRMDIELRPPHAMPTSHWHGQVEVNVPF DGDVEYLINNEVVRIEKGYITLFWACTPHQLTRPGDCQQMAIFNLPMHLFLSWPLDRELI NHVTHGMVIKSLAAQQLSAFEVRRWQQELNHDNEQIRQLAIDEIALMLKRLSLSGWQPIL VNKTSRTHKNSVSRHAQFYVSQMLEFIAAHYDQALTVNAVAEHVKLNPNYAMGVFQRVMQ QTMKQYITAMRINHVRALLSDTDKTILDIALTAGFRSSSRFYSTFTRYVGMPPQQYRKLS QQRRHGLALPEA >gi|289775105|gb|GG745512.1| GENE 215 244110 - 245612 1961 500 aa, chain - ## HITS:1 COG:STM4290 KEGG:ns NR:ns ## COG: STM4290 COG0477 # Protein_GI_number: 16767540 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 500 1 500 500 923 91.0 0 MLKRKKIKPITLKDVTIIDDGKLKKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPDAN PSVQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYA TIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGA GVVVLISSVVGEQNFLDWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVDTMEQGDRE GLQDGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLI IIAIMVGMLFVQPVIGMLSDRFGRRPFILIGSVALFALAIPAFIMINSNVIGLIFAGLLL LAVVLNCFIGVMASSLPAMFPTHIRFSALASAFNISVLVAGLTPTLAAWLVETTQNLMMP AYYLMVIAVVGMATGLSMKETANRPLKGATPAASDIQEAKEILGEHYDNIEQKIEDIDQE IADLQAKRSRLVQQHPRIND >gi|289775105|gb|GG745512.1| GENE 216 246157 - 246492 403 111 aa, chain + ## HITS:1 COG:STM4289 KEGG:ns NR:ns ## COG: STM4289 COG2824 # Protein_GI_number: 16767539 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Salmonella typhimurium LT2 # 1 111 1 111 111 200 90.0 6e-52 MQLPHCPKCDSTYTYEDNGMYICPECAHEWNPAEATEESDVLIVKDANGNLLADGDSVTV VKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN >gi|289775105|gb|GG745512.1| GENE 217 246721 - 247155 570 144 aa, chain + ## HITS:1 COG:STM4288 KEGG:ns NR:ns ## COG: STM4288 COG2764 # Protein_GI_number: 16767538 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 143 1 143 147 206 67.0 2e-53 MSLSPYLAFAGNCAEAIAFYQQTLGAELMFKMTFGEMPPPAQEASDGCPSGQKMADDAIA HASLRINNGELMLSDSAFGPDVHYAGFTLVLDPSDVAEGQRWFDALAVGGRIEMAWQETF WAHGFGKVVDRFGVPWMINVVKQG >gi|289775105|gb|GG745512.1| GENE 218 247311 - 248036 942 241 aa, chain + ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 241 393 82.0 1e-109 MHLSRHPTSYPTRYQEIAARLEQELRHHYRCGDYLPAEQQLATRFDVNRHTLRRAIDQLV ERGWVQRRQGVGVLVLMRPIDYPLNAQARFSQNLLEQGSDPTSEKLLSVLRPASAHVAEA FDINEGENIIHLRTLRRVNGVALCLIDHYFADLRFWPVLQTFSHGSLHDLLRDELDVKLT RARTKISARRAQAKESKLLEIPNMAPLLCVRTLNSRQGEQTPIEYSVSLTRADMIEFTME H >gi|289775105|gb|GG745512.1| GENE 219 248037 - 248489 474 150 aa, chain + ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 211 74.0 3e-55 MHFDTATRQRWMSVLAHSEPQDLLARMQSLQLAPAYELIRTPETGLVQLQARMGGIGDRF FAGDATLTRAAVRLADGTLGYSWILGRDRPHAERCAAIDALLQSPRHFHTLMETLITPLE ALRSARIEARRAEVNASRVDFFTLVRGDNA >gi|289775105|gb|GG745512.1| GENE 220 248486 - 249070 746 194 aa, chain + ## HITS:1 COG:phnH KEGG:ns NR:ns ## COG: phnH COG3625 # Protein_GI_number: 16131926 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli K12 # 1 194 1 194 194 297 79.0 1e-80 MTLQPAFTLAVQDAQHSFRRLLKAMSEPGVIVSLQQLQHGWQPLNVASTSLLLTLADHET PVWLASALHNDLVGQNLRFHTGAPLVDQPQQAVFAVANDGISAEQLNVLSAGTVTAPETG VTLIVQLASLSGGRMLRLTGAGIAEERMIAPQLPDCIIDELTERPHPFPLGIDLILTCGE RLLAIPRTTHVEVC >gi|289775105|gb|GG745512.1| GENE 221 249071 - 250135 1326 354 aa, chain + ## HITS:1 COG:ECs5082 KEGG:ns NR:ns ## COG: ECs5082 COG3626 # Protein_GI_number: 15834336 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 592 86.0 1e-169 MYVAVKGGEKAILAAHALQEQKRRGDGRLPELSVDQIGDQLNLAVDRVMTEGGIADRELA ALALKQASGDNVEAIFLLRAYRTTLPRLAVSEPINTAEMRLERRISAVYKDIPGGQLLGP TYDYTHRLLDFTLLANGEAPSVQQADGEAEPTPHVFSLLTQQGLAKAEEDRGTPPDDITR TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYVQVEIVPEELG FSVNIGELLLTECEMVNGFVAPQDEPPHFTRGYGLTFGMSERKAMAMALVDRALQAPDYD EEIAGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELALLKRLQRENERG >gi|289775105|gb|GG745512.1| GENE 222 250128 - 250976 1284 282 aa, chain + ## HITS:1 COG:phnJ KEGG:ns NR:ns ## COG: phnJ COG3627 # Protein_GI_number: 16131924 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli K12 # 1 282 1 281 281 534 92.0 1e-152 MANPLTGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASV IGENDVLKVIDQGADDTTNAVSIRQFFKRVTGVATTERTEDATLIQTRHRIPETPLVEDQ ILIYQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNG RYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYAVPPYTPVESLDFDDHPFTVQEWDE PCAICGSRHSYLDEVVLDDSGQRMFVCSDTDYCRQQSEGQKK >gi|289775105|gb|GG745512.1| GENE 223 250943 - 251731 375 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 8 261 4 267 329 149 33 2e-34 MPPAERGAEKMSQPLLAVNNLTHLYAPDKGFRDVSFELWPGEVLGIVGESGSGKTTLLKA ISARLTPQQGEVLYQQRSLYAMSEAEHRRLLRTEWGVVHQHPMDGLRRQVSAGGNIGERL MATGARHYGNIRATAEKWLQEVEIPPSRIDDLPTTFSGGMQQRLQIARNLVTQPKLVFMD EPTGGLDVSVQARLLDLLRGLAVELNLAVVIVTHDLGVARLLANRLLVMKQGQVVESGLT DRVLDDPHHPYTQLLVSSVLQN >gi|289775105|gb|GG745512.1| GENE 224 251839 - 252519 248 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 209 245 100 31 1e-19 MIRVENIHKTFVLHQQHGVRLPVLADASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP DSGHIHIRHGEEWVDLVTATPRKVLEVRKTTIGWVSQFLRVIPRISALEVVMQPLLDLGT PREASAAKAAQLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFAVDYPILLLDEPTASL DAKNSAAVVNLIHDAKARGAAIVGIFHDEGVRRQVADRLHPMGMTA >gi|289775105|gb|GG745512.1| GENE 225 252516 - 253652 1245 378 aa, chain + ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 627 82.0 1e-179 MIINNVKLVLDDDVVHGSLEVQHGRILAFAESQSRLPQALDGEGGWLLPGLIELHTDNLD KFFTPRPKVDWPAHSAMSSHDAMMVASGITTVLDAVAIGDVRDGGDRLENLEKMVNAVEE TQKRGLNRAEHRLHLRCELPHHTTLPLFEKLIDRESVSMVSLMDHSPGQRQYADRSKYRD YYQGKYHLTHDEMDRFEAEQMALAATWSQPNRQTIAAMCRARRIALASHDDATEAHVAES SQLGSVIAEFPTTLAAAQASRQHGMHVLMGAPNIVRGGSHSGNIAAHQLASSGLLDILSS DYYPASLLDAAFRIADAEDNAFTLAQAIRLVSKHPAQALGLDDRGVIAEGKRADLVLARR RGEHVHIDHVWRQGTRVF >gi|289775105|gb|GG745512.1| GENE 226 253652 - 254215 595 187 aa, chain + ## HITS:1 COG:ECs5077 KEGG:ns NR:ns ## COG: ECs5077 COG3709 # Protein_GI_number: 15834331 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 175 1 175 185 261 76.0 5e-70 MPGKLIWLVGPSGSGKDSLLAALRQREHPQLLVAHRYITRPFNAGSENHIALSEHEFFTR AEQHLFALSWHANNTYYGIGVEIDLWLHAGFDVVANGSRAHLALARERYGEVLVPICLAV SPPVLRQRLEQRGRENALEIAQRLDRAARYKPDNCLTLNNDGSLRQSVDDFFRLLRSHVA RVEDQPV >gi|289775105|gb|GG745512.1| GENE 227 254231 - 254989 857 252 aa, chain + ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 1 249 1 249 252 409 77.0 1e-114 MSLTIRLTGTGGAQLVPVFGCDCAACRRARREESHRRRPCSGVVTFNSAVTLLDAGRPDL MEHHPAGSFQQVLLTHYHLDHVQGLFPLRWGVGASIPVYGPPDDAGCDDLLKHPGLLDFS HTVTPFVVFDLQGLRVTPLPLNHSKLTFGYLLESAHSRVAWLSDTAGLPDKTLKFLLNNR PQAMIIDCSHEPRAQTPRNHNDLNTVRHLNQVIGCPRVILTHISHQLDVWMMDNPLPTGF EAGYDGMEIVLD >gi|289775105|gb|GG745512.1| GENE 228 255012 - 255365 324 117 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4756 NR:ns ## KEGG: Kvar_4756 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 117 1 117 117 95 99.0 7e-19 MKRYATVLLFCTLSLTSLAARADIIDDAIGNIQQAINDAYNPGSNRSDDDDRYDDDGRYD DGRYQGSRQQSRDSQRQYDDRQRQLDDRRRQLDERQRQLDQDRRQLESDQRRLDDSY >gi|289775105|gb|GG745512.1| GENE 229 255436 - 257721 2827 761 aa, chain - ## HITS:1 COG:Z5692_1 KEGG:ns NR:ns ## COG: Z5692_1 COG0642 # Protein_GI_number: 15804683 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 5 642 6 640 640 794 73.0 0 MTARRHPFFTSARGRLLSFNLLMGVVTLLVSGVAVFGFHHASQLQEQVQRQTLNDMRGSM DLARDTANVATAAVRLSQVVGALEYKSEAERLLATQQALKHSLAQLAAAPLAQQEQARVA NIIRRSNALQQSVAEMLERGQRRHLQRNALLSSLYQNQSNLRHLADLNDRGGDKAIDPRR LAEMDRLIVAAIHTVTPRSIVLQLDQLRGDLPAGSADPALAFFLPDVTRELATLAPLSAQ LEESDLTISWYMYHIKALVALLNEDINQYVTRVAEASEQRAAQSHRELRSISMFILLSAL LALAITGCAGWYIYRNLGSNLTAISLAMSRLAQGEPNVSVPALQRRDELGELARAFNVFA RNTASLEHTTRLLKEKTTQMEIDRIKRQELEEALLHSQKMKAVGQLTGGLAHDFNNLLAV IIGSLELVEPDARDAPRLSRALKAAERGALLTQRLLAFSRKQALHPQAVAMAPLLENLCE LMRHSLPATLSLEIEAQSPAWPAWIDVGQLENALINLVMNARDAMAGRDGVIKIRTWNQR VTRSSGQRQDMVALEVIDHGSGMSQAVKARVFEPFFTTKATGSGSGLGLSMVYGFVRQSG GRVALESAPGQGTTVRLQLPRAMTEVETTVAPAEDEPLPAGERLALVLEDEEDVRQTLCE QLHQLGWLTLETPSGEEALQLLEASPDIALLISDLMLPGALSGADVIHTARRRFPALPVL LISGQDLRPAQNPALPEVEWLRKPFTRAQLAQALSAAYARI >gi|289775105|gb|GG745512.1| GENE 230 257901 - 259421 2024 506 aa, chain + ## HITS:1 COG:ECs5073 KEGG:ns NR:ns ## COG: ECs5073 COG1129 # Protein_GI_number: 15834327 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 503 1 503 506 843 89.0 0 MTATPVLEMRHIAKAFGKFYALKGVDLTVWPGEIHALMGENGAGKSTLMKILAGAYTATS GEILIDGKPQTIRGPKDALAAGITLIYQEMQLAPNLTVAENIFLGSELARGGLVQRKAML SQAQAVIDRLGAQFKASDRVMTLTIAEQQQVEIARALHRQSRILVMDEPTAALSSRETQR LFELILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLVRDKLNAPELVRMMVG RPLSDLFNKERDIPRGQPRLRVEDLTDGGKVKPSSLVVHAGEIVGLAGLVGAGRSELAQL IFGVRKATGGVIEIDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLELAAQENITMATLE RDANWGMLNRRKAQTISDDAIQLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILI LDEPTRGVDVGAKSEIYRIMNDMARQGVAILMISSELPEVVGMSDRVYVMREGAIAGELQ AGDISQESIMTLATGVNDSHLKAGQL >gi|289775105|gb|GG745512.1| GENE 231 259418 - 260416 1675 332 aa, chain + ## HITS:1 COG:YPO3963 KEGG:ns NR:ns ## COG: YPO3963 COG4158 # Protein_GI_number: 16124091 # Func_class: R General function prediction only # Function: Predicted ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 7 331 6 330 330 450 88.0 1e-126 MSIPKETSAPVAKSASAKKMLMGDLMQTVGILPILILIVAVFGFIAPNFFTESNLLNITR QASINIVLAAGMTFIILTGGIDLSVGSILGTTAVAAMVVSLIPELALLSIPAALMLGLLL GLFNGALVAFAGLPPFIVTLGTYTALRGAAYLLADGTTVINSDISFEWIGNDYLGPVPWL VVIALAVIAVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGG VMSASRLYSANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLM GVSYFWQLVIKGAVIIIAVLIDKYRTRHHQSA >gi|289775105|gb|GG745512.1| GENE 232 260447 - 261388 1395 313 aa, chain + ## HITS:1 COG:ECs5071 KEGG:ns NR:ns ## COG: ECs5071 COG1879 # Protein_GI_number: 15834325 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 480 92.0 1e-135 MRLKPIVTALCAGALLAASPFASAKELKAIGVTVGDLANPFFVQITKGAELEARKLAGDN VKVTLVSSGYDLGQQVAQIDNFIAAKVDMIILNAADSKGIGPAVKRAKEAGIVVVAVDVA AEGADATITSDNTQAGELACKYISDRLNNKGNVVIINGPPVSAVQNRVEGCETEFKKHPD IKILSSNQNAKGSREGGLEVMTSLLAANPKIDGVFAINDPTAIGADLAAKQAQRSEFFIV GVDGSPDGEEALKRKNSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPTAPVLIPVTMID KNNVSSYKGWTVK >gi|289775105|gb|GG745512.1| GENE 233 261463 - 262470 1134 335 aa, chain + ## HITS:1 COG:ECs5068 KEGG:ns NR:ns ## COG: ECs5068 COG0524 # Protein_GI_number: 15834322 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 327 2 328 333 492 80.0 1e-139 MERKGIIAAGNMLVDHVHQIRQWPERGWLVEIVHSERATGGAPLNVLLTLAKMHAGLPLQ AVGLIGEDNDGDYITAMLDQYHINRQLVQRTSSAPTSMTQVMTDADGQRTFFHSPGANRL LDLPAFEPLDTPLKIFHLGYLLLLESLDRPDEAFGTRSARLLAQMRDRGYELSLDLVSRK GDPHYRPRVLPALAHLDYLTINELEASEFSGLEIRLPNGEPHVANIARAASALLDAGVRQ RVVIHCPEGAWGVSRTEAGRWVPSWRLPPEEIIGSVGAGDAFCAGLLYGSHERWPLTDSL QLAHACARASLQAANAIDGAKTLPELQAFIQLQNG >gi|289775105|gb|GG745512.1| GENE 234 262595 - 262813 129 72 aa, chain - ## HITS:1 COG:no KEGG:KPK_5183 NR:ns ## KEGG: KPK_5183 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 72 220 291 291 146 100.0 2e-34 MIDALKSCFTQQDIDFLLSFKRGEPDWRLAPETRIQDLPAVQWKLRNIHQMPAIKRAESL DKLEKVLAEWRS >gi|289775105|gb|GG745512.1| GENE 235 262861 - 263472 165 203 aa, chain - ## HITS:1 COG:no KEGG:KPK_5183 NR:ns ## KEGG: KPK_5183 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 192 1 192 291 375 98.0 1e-103 MQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRTIALPHIRDALARIA ANLQQQAGMNAVLQANRSDEMRVVVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVF GYASLPVVSLPDLYGGKLCAALDRQHPRDFYDVKLLLDAQELNRPIFNGFIAYLLSHNRP LAEVLSPRWRKILLNPFTVNSAG >gi|289775105|gb|GG745512.1| GENE 236 263520 - 264278 393 252 aa, chain - ## HITS:1 COG:no KEGG:KPK_5184 NR:ns ## KEGG: KPK_5184 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 252 1 252 252 496 100.0 1e-139 MPSKLNWLLQNSAPGDVILQSWLSRHAISPSLAFKYTQSGWLKKRGNGVYARAGREPEWN DALACLQNQLAAPVYVAGLSSLVWQGRSHYLQLKQNQCWLSMENKALLPKWFREFPGVEW IVISGQKLPVLDDKYRVTLDVKGKRLTGSAPELAAYELLSAVPGTLSFNHAAELFQGLVN LNPRKVEYLLSVSQSVQTKRLYLFFASFYEHGWLRRIDSQKIDLGAGKRQIVVNGKFNAQ YQITVPERFQKE >gi|289775105|gb|GG745512.1| GENE 237 264363 - 265052 760 229 aa, chain - ## HITS:1 COG:ECs5067 KEGG:ns NR:ns ## COG: ECs5067 COG0745 # Protein_GI_number: 15834321 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 4 222 17 234 235 316 74.0 2e-86 MGELLSDVLGAHAFEVLVCQTGGDALARVAQRADIALVLLDMILPDTHGLQVLQQLQRTR PELPVVMLSGLGSESDVVVGLEMGADDYIAKPFSSRVVVARVKAVLRRSGALAGETSGVG SGLTFNGWRLDTTRCELYNPQQQAIPLTQGEYGLLLALAQNARRVLNREQLLALTHNEST EVFDRTIDVLIMRLRRKIELNPHQPTLIKTLRGLGYVFSADVTHSDKAA >gi|289775105|gb|GG745512.1| GENE 238 265364 - 265783 613 139 aa, chain + ## HITS:1 COG:ECs5061 KEGG:ns NR:ns ## COG: ECs5061 COG0243 # Protein_GI_number: 15834315 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 139 1 139 715 287 97.0 4e-78 MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP RLKTPMIRRQRGGKLEAVSWDEALDYVATRLGAIKEKYGPDAIQTTGSSRGTGNETNYVM QKFARAVIGTNNVDCCARV >gi|289775105|gb|GG745512.1| GENE 239 265832 - 267511 2180 559 aa, chain + ## HITS:1 COG:STM4285 KEGG:ns NR:ns ## COG: STM4285 COG0243 # Protein_GI_number: 16767535 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 559 157 715 715 1114 94.0 0 MSNAITEIDNTDLVFIFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHI ALKNGSNIALLNAIGHVIIEEDLYDKSFVASRSEGFEEYRKIVEGYTPESVEEITGVSAQ EIRACARMYASAKSAAILWGMGVTQFYQGVETVRSLTSLAILTGNLGKPSVGVNPVRGQN NVQGACDMGALPDTYPGYQYVKFPENREKFARAWGVDSLPEHTGYRISELPHRAEHGEVR AAYIMGEDPLQTDAELSAVRKAFEQLELVIVQDIFMTKTAAAADVILPSTSWGEHEGVYT AADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGAT YEKMGELGYVMWPCRDESDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMV LSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAERLGIEDEALVWVNSRKGRII TRAQVSDRPNKGAVYMTYQWWIGACNELVSENLSPITKTPEYKYCAVNVERIADQRAAEQ YVIDEYNKLKARLRESAMG >gi|289775105|gb|GG745512.1| GENE 240 267947 - 268633 860 228 aa, chain + ## HITS:1 COG:ECs5060 KEGG:ns NR:ns ## COG: ECs5060 COG0790 # Protein_GI_number: 15834314 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 4 228 7 229 229 287 67.0 1e-77 MKYLFLFLLVFTSGAAVATEPGSQYQQQAEAGDRRAQYYLADTWVSSGDYEKAEYWAQKA AAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVKVGSKSGEIVLARVLVNRQAGPTD VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSALSRTGYA EYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISKG >gi|289775105|gb|GG745512.1| GENE 241 268668 - 269981 2011 437 aa, chain - ## HITS:1 COG:STM4283 KEGG:ns NR:ns ## COG: STM4283 COG1301 # Protein_GI_number: 16767533 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Salmonella typhimurium LT2 # 3 437 2 436 436 717 94.0 0 MKKTKKVSLAWQILLALVLGILLGSYLHYHAESRDWLISNLLTPAGDIFIHLIKMIVVPI VISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIVLGITLANVFQPGTGIDMSQLAA VDISKYQSTTAEVQSHAHGLMGTILSLVPTNIVASMAKGDMLPIIFFSVLFGLGLSSLPA THREPLVTVFRSISETMFKVTHMVMRYAPIGVFALISVTVATFGFASLWPLAKLVLLVYF AILFFALVVLGIVARLCGLSIWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPAS ITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEITLVLTLMVTSKGIAGVPG VSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKK ALAYEREVLGKFDKTAQ >gi|289775105|gb|GG745512.1| GENE 242 270394 - 272352 2475 652 aa, chain + ## HITS:1 COG:STM4275 KEGG:ns NR:ns ## COG: STM4275 COG0365 # Protein_GI_number: 16767525 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Salmonella typhimurium LT2 # 1 652 1 652 652 1268 92.0 0 MSQIHKHPIPANIAERCLINPEQYKAQYQQSITDPDTFWGEQGKILDWIRPYTRVKNTSF APGNISIKWYEDGTLNLAANCLDRHLAERGDQTAIIWEGDDASQSKHITYRELHADVCRF ANVLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAIHSVIFGGFSPEAVAGRIIDSSS RLVITADEGLRAGRAIPLKKNVDDALKNPNVNSIEHVVVLKRTGGKIDWQEGRDLWWSDL MANASAEHRPVEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHKVSILYTAPTA IRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVMDTWWQTETGG FMITPLPGAIELKAGSATRPFFGVQPVLVDNEGLPLDGATEGNLAIADSWPGQARTLFGD HERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHP KIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPTPELYAEVRNWVRKEIGPLATPDVLHWTD SLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAITMPS >gi|289775105|gb|GG745512.1| GENE 243 272536 - 272847 310 103 aa, chain + ## HITS:1 COG:STM4274 KEGG:ns NR:ns ## COG: STM4274 COG3162 # Protein_GI_number: 16767524 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 102 1 102 104 164 80.0 4e-41 MNEQLCQRIENSAHFRELVASRQRFAAILSVIMLVIYVGFILLIAFAPGWLGTPLHAGTS VTRGIPLGIGVIVISFILTGIYVWRANGEFDRLTKSVLNEVKA >gi|289775105|gb|GG745512.1| GENE 244 272844 - 274499 2451 551 aa, chain + ## HITS:1 COG:yjcG KEGG:ns NR:ns ## COG: yjcG COG4147 # Protein_GI_number: 16131893 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 2 551 1 549 549 889 90.0 0 MIKRVLTALAATLLPLGAHAADAITGAVQRQPTNWQAIVMFLIFVALTLYITYWASKRVR SRSDYYTAGGNITGFQNGLAIAGDFMSAASFLGISALVYTSGYDGLIYSLGFLVGWPIIL FLIAERLRNLGRYTFADVASYRLKQGPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFG LNYHVAVVLVGVLMVLYVLFGGMLATTWVQIIKAVLLLCGASFMAFMVMKHVGFSFNNLF TEAMAVHPKGAAIMSPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAKEARKSV FYATGFMGYFYILTFIIGFGAIMLVGANPAFKDAAGQLIGGNNMAAVHLADAVGGNLFLG FISAVAFATILAVVAGLTLAGASAVSHDLYANVFRKGATERQELKVSKITVLILGVVAIL LGILFENQNIAFMVGLAFSIAASCNFPIILLSMYWSKLTTRGAMVGGWLGLLTAVILMIL GPTIWVQILGHEKALFPYEYPALFSIAIAFIGIWVFSATDNSPEGMREREQFRAQFIRSQ TGIGIERGQAH >gi|289775105|gb|GG745512.1| GENE 245 274554 - 275657 998 367 aa, chain - ## HITS:1 COG:STM4591 KEGG:ns NR:ns ## COG: STM4591 COG3539 # Protein_GI_number: 16767832 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 9 367 8 361 361 130 32.0 5e-30 MGMKKLIFLFMLVLCPLYSWAACTGTNYGDVSMTNLPEKILVNAGSYTAGTVLYDSGKIT RAQTELINCEGSTYAVFAWSSNNAGALIGDNIYATSVQGIGLRVKVWLNISGEYDGDTDD FSPDSQVHYIGDVNYYLGKPTGLFDYYASTHYTPAYQLQLVATGGAIASNSQLSFSDPVA TVSAKDSKATLSISRLHISGTTSIQMIPMGCIVGSNNLSFAMGSINASEFNTATKVGNAR QSLTLACEPGTNVSMRVAAAQASGDNPGNTVMALTAEENVATGVGVQLNMDGEALPLNTD ISLYTSSRTTVTNSGADASYSYFTNPDSPGGAAAMQTLALSTNYYKTGSAVTAGSANATG VITLTYN >gi|289775105|gb|GG745512.1| GENE 246 275671 - 276240 317 189 aa, chain - ## HITS:1 COG:STM4592 KEGG:ns NR:ns ## COG: STM4592 COG3539 # Protein_GI_number: 16767833 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 7 189 1 185 185 58 27.0 6e-09 MEEGADMNMRDGSTRGILVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSCEVAVEPSNS IDLGTVSSQTFSGNAGSSGASVPVKLVFSSCSADASAVTIAFSGAKFDNTYTSVYKNFRT GSDGASGVGMQLLTLADQQPLGPGDQYLYTFGGRADVHIFNMVARMFSPYGQVRPGIVGF TATFDVAYK >gi|289775105|gb|GG745512.1| GENE 247 276259 - 278838 2297 859 aa, chain - ## HITS:1 COG:STM4593 KEGG:ns NR:ns ## COG: STM4593 COG3188 # Protein_GI_number: 16767834 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 12 859 1 845 845 681 43.0 0 MIMVCQGRNIPLSFSSVELLFSTKSICVAIVLCLSTLSSRAEAGEYFNPNLLEVAEEPAA SVDLSYFSQDGVPPGTYHLDVYINDKYVSSESLTFQEIGHDAGATASPCLSAEYLNSWLI NTTAYPQLFAAGETCARLTAIPGMTFSVSLAQQRIDFTVPQAAMLNRPRDYIPESQWQQG INAGLLNYSVTGQRNAPRHNGATVDSQFVSLQPGVNLGPWRLRNYSTYSHSDNSSRWESV YSYLARDIHTLRSQLVVGNTYTSSGIFDSVSFTGLQLSSDKEMLPDSLHGFAPTIRGIAR TTAEVSVYQNGYSIYKTTVAPGAFEINDLYATGSAGDLYVTVKESDGSEQNFVVPFASLA VLQREGQLDYALSSGRTRSGSSDDKEYNFIQSSLAYGATSNFTLYTGFQQAEDKYTNLLL GAGFNLGTIGALSFDGSQSWADVKTSDTASSTRKEQGQSYRVRFSKSFLQTGTSFSVAGY RYSTAGYYSFQDFVDNASTQRDCCTQSGRTKGRFDASLSQTLFGYGSLSLSLVNETYWDS SRMESVGVGYSGSIGRTSYFINYSYNRNVQSTDDSGNNRPASDTIVSLTLSIPLGETLSA NYTLNHGRHNDTTHSVGLNGSAFEDRSLNWSLQEGYNTQDKSTSGNLSVNYQGAKGDVAG GYGYDHYSNHYNYSLRGGMVAHAGGLTLSRFLGESAALIETPGVSDVRVQGQTNVTTDAA GYAVVPYVRPYHRNSLALDEQQMAGAEVDNVARTVVPTRNAIVKVQYDTRIGYKAMLTLR TRNGVVPFGALVTLDNDRASAARSNIVGDEGQVYLTGLQKRGQLLARWGEKSSEQCTVHY DFSSMALGDDILFYQAECR >gi|289775105|gb|GG745512.1| GENE 248 278792 - 279481 419 229 aa, chain - ## HITS:1 COG:STM4594 KEGG:ns NR:ns ## COG: STM4594 COG3121 # Protein_GI_number: 16767835 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 7 220 8 219 227 218 52.0 9e-57 MRYPFFVVGFLLSSSIAQASVVVGGTRLVFDGAKNNAVITVENKDQSSNIVQSWLSVVDA ASPAKDAFIITPPLFRLKAGEKGFVRVVRSGKKLPDDRESMFWLNIKGIPATEYVPDKNV VQFAINSKIKLIYRPAALKGNTPESYAEKLQWGKEGASVTVKNNSPLYMNFSQVSLNGKN ISGAWFAAPFSTLKIPVQSTLSATGKKEITWSVINDYGMSGKKYTAIIQ >gi|289775105|gb|GG745512.1| GENE 249 279542 - 280081 409 179 aa, chain - ## HITS:1 COG:STM4595 KEGG:ns NR:ns ## COG: STM4595 COG3539 # Protein_GI_number: 16767836 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 18 178 14 180 181 60 34.0 1e-09 MKMSKKILAGALIFSACSVLSTVAQADNTITFNGVVSDTTCTATIDGGVTAIDMGTTSVA DLKAYTFGAAKNFSFSLADCPTAEDGGNSIARVTFGGVSDTANSDYFKNQATDEPATGVA VALFDEAGKVMKNNEEGSDVDISSGAATIPFTVKMVKSGDTDPTKGTVQTTVTYNVTYY >gi|289775105|gb|GG745512.1| GENE 250 280610 - 281287 955 225 aa, chain - ## HITS:1 COG:STM4272 KEGG:ns NR:ns ## COG: STM4272 COG1346 # Protein_GI_number: 16767522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Salmonella typhimurium LT2 # 2 225 6 229 229 319 87.0 2e-87 MLSVLCLVATLGLYYANKRLYRRFHKLPLMPLVFTPILLVLILVLGHISYQSYMGETHWL LWLLGPATIAFAVPVYENVAVIKRHWMSLSAGVVTAVVVAVTSSVWLARGLMLSDEIQRS LAVRSVTTPFALAAAKPLGGQPDLVALFVVITGVFGMAVGDMLFLRLAIREGMAKGAGFG AASHGAGTARSYELGQQEGVVASLVMMLSGVVVVLAAPLVRWLLF >gi|289775105|gb|GG745512.1| GENE 251 281292 - 281702 444 136 aa, chain - ## HITS:1 COG:STM4271 KEGG:ns NR:ns ## COG: STM4271 COG1380 # Protein_GI_number: 16767521 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Salmonella typhimurium LT2 # 1 136 1 136 136 154 80.0 6e-38 MAFAPARVAPAVAQRLQIPLQVLLYVGLFIFAQYLVNRWQVPLPANLVGMVMLLLLIVCR VIPLSWVRAGARWLLAEMLLFFVPAVVAVVNYTQLLMVDGWRIFLVIALSTLMVLGATAW VVDRVYRYEVSRLKNE >gi|289775105|gb|GG745512.1| GENE 252 281808 - 282689 1141 293 aa, chain + ## HITS:1 COG:STM4270 KEGG:ns NR:ns ## COG: STM4270 COG0583 # Protein_GI_number: 16767520 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 293 1 293 295 486 81.0 1e-137 MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLLTDT GRVVFERGQAILGEFSQLESELSDINHLHKGVLRLGIPPMVGMLMAEPISRFRERYPGVE LKIAEFGGLTVQQAVSNGELDMAMTALPIEEGSHLTTLPLFNHPLCVLTPRTAPWEGVTS LSPAELAAYPLVIYNEEFALSQQLMRLFTEHDVKPRIAVRSGQWDFLAAMVQAGIGVAIL PEPICQRLDPQNFCWIPLQSELRWELGMIWREGVYMSRSAEAWLACSKAFWLE >gi|289775105|gb|GG745512.1| GENE 253 282852 - 284498 2170 548 aa, chain - ## HITS:1 COG:STM4269 KEGG:ns NR:ns ## COG: STM4269 COG0025 # Protein_GI_number: 16767519 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Salmonella typhimurium LT2 # 1 548 1 548 548 914 91.0 0 MEIFFTILIMTLVVSLSGVVTRVLPFQVPLPLMQIAIGALLAWPTFGLHVEFDPELFLVL FIPPLLFADGWKTPTREFIEHGREILGLALALVVVTVVGIGFLIYWIVPGIPLIPAFALA AVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMVFTVGG ATVEFLKVAIGGVLAGFVVSWSYGRSMRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIG VSGILAAVAAGMTITRSGVMRTAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPDILSS SLVAAEADPNVETWMLFTDIILIYAALMLVRFGWLWSMRKLSQRFLKKKPMEFGSWTTRE LLISSVAGVRGAITLAGVLSIPLLLPDGNVFPARYELIFLAAGVILFSLFVGVIALPILL RHIESSDNVQQRKEERLARAATADVAIVAIQKMEERLAADTKENIDNQLLTEVSSRVIGN LRRRADGRNDVETSMLEESLERRFRLAALRSERGELYHLRATRQISNETLQKLLHDLDLL EALLIEDQ >gi|289775105|gb|GG745512.1| GENE 254 284646 - 285995 1989 449 aa, chain - ## HITS:1 COG:STM4268 KEGG:ns NR:ns ## COG: STM4268 COG2252 # Protein_GI_number: 16767518 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 449 1 449 449 660 93.0 0 MSTPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV FVSTCLVAGVGSLVMGLWANLPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVL FTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGKFA SFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDDKG NSLIGSLDIIGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALT TDSLSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAY ATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVLTCNIVTGIMIGFATLVIGRL VSGEWRKLNLGTVIIAVALVAFYAGGWAI >gi|289775105|gb|GG745512.1| GENE 255 286386 - 287054 863 222 aa, chain - ## HITS:1 COG:STM4267 KEGG:ns NR:ns ## COG: STM4267 COG0625 # Protein_GI_number: 16767517 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 222 1 222 222 325 77.0 4e-89 MLTVHHLNQSRSQRVLWALEELQLPYQIVRYQREKSMLAPAALKKVHPLGKSPVLEDNGY VLAESGAILEYLQETWDSGGLLKPQAIEDKLQYRFWLHYAEGSLMPLLLMKLVFASLGKP PVPFGVRSLGALLGKGIQKAWLDPQLATHARFIDDHLATRPWFAGERLSMADIQMSFPVM ALLARGGVHDLVHIEAWRQRVEQRPAWQRAIERGGPFTLPGA >gi|289775105|gb|GG745512.1| GENE 256 287314 - 287772 535 152 aa, chain - ## HITS:1 COG:STM4266 KEGG:ns NR:ns ## COG: STM4266 COG0789 # Protein_GI_number: 16767516 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 269 88.0 1e-72 MEKKSPRIKMLLTPGEVAKRTGVAVSALHFYESKGLIHSQRNAGNQRRYRRDVLRAVAII KIAQRIGIPLATIGDAFGVLPEGHNLSAKEWKMLSSQWREELDRRIHTLTALRDQLDGCI GCGCLSRRDCPLRNPGDKLGEEGTGARLLEEE >gi|289775105|gb|GG745512.1| GENE 257 287857 - 288186 335 109 aa, chain + ## HITS:1 COG:STM4265 KEGG:ns NR:ns ## COG: STM4265 COG2207 # Protein_GI_number: 16767515 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 180 90.0 7e-46 MSHQDIIQTLIEWIDEHIDQPLNIDIVARKSGYSKWYLQRMFRTVMHQTLGDYIRQRRLL LAAEALRTTQRPIFDIAMDLGYVSQQTFSRVFRREFDRTPSDYRHQISA >gi|289775105|gb|GG745512.1| GENE 258 288171 - 289775 1595 534 aa, chain - ## HITS:1 COG:STM4264 KEGG:ns NR:ns ## COG: STM4264 COG4943 # Protein_GI_number: 16767514 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Salmonella typhimurium LT2 # 1 529 1 530 533 694 61.0 0 MADSAPHKALRLVGMGLVILLPVMLALWFAQLRAKAETIDQLHSFSQLALQKTEMVIREA DQARFKASQYRGELCSAEHQRYLLHIVRGLLYVEDLIYANGQRFICSTSAHPETGWRMPA ANYTKKPDVAIYYYRDTPFYPGFAMNYMQKGPYVVVVNPYSFSSVIASDRDLAYGVFDTK TNLFFSLSNNVEPAELQALIREGDAFFNQNGRVYTIARSAIRPIAVIMSTSRASYYHNFC DQASLTLPLGIICSILLVLVWTRTRRQYHSPRNMLQRALSCRQLRLHYQPIIDIKNNRCV GAEALLRWPGFDGPVMNPAEFIPLAENEGMIAQITDYVVDELFYEMGEFLASHPQLYVAI NLSASDFHSARLISQISEKAHSYAVCIGQIKIEVTERGFIDVAKTTPVIQAFREAGYEIA IDDFGTGYSNLHNLHALNVDILKIDKTFVDTLTTNNTSHLIAEHIIEMARGLRLKTIAEG VETPEQVSWLYKRGVQFCQGWLFAKAMPAREFMQWLANAPTPISRPQPPRHAEI >gi|289775105|gb|GG745512.1| GENE 259 290284 - 290565 240 93 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4786 NR:ns ## KEGG: Kvar_4786 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 93 1 93 93 151 100.0 1e-35 MASITTSVVLLRWPLVSAVLMFLASSLNIQLRKSDYAGLAVICSCLGLAAACWFATGLLG ITLIDIAKIWGNIKDVMIEVMSQTPPEWPMMMT >gi|289775105|gb|GG745512.1| GENE 260 290612 - 291469 1068 285 aa, chain - ## HITS:1 COG:AGl601 KEGG:ns NR:ns ## COG: AGl601 COG1177 # Protein_GI_number: 15890417 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 281 34 282 288 119 31.0 9e-27 MKALTLASSPSWWIKGRRKVRASLALQTLLLLFMLLAMFGPLLNLLIWTVAESWYFPHSL PSQWGLKYWYQVFNPYSDVSGSLLTSVLIALLSVGVCLLISVPAGYALSRRKMPLRVLFM LLFLIPQAFPNLTVYMNVARLFYQWGLNGSIAGVVLVHSVHGLMYSVWICVAAFSSIDPL LARASRNLGAGPVYTFWHIVLPQAAPGIVAASIFVFLESLDEFTGTFFVGAPDITTLPLL LYNASMSGNYQVSSITALILLVPSLLFMVVIHKFMRPEMMAKLGK >gi|289775105|gb|GG745512.1| GENE 261 291466 - 292299 971 277 aa, chain - ## HITS:1 COG:AGl602 KEGG:ns NR:ns ## COG: AGl602 COG1176 # Protein_GI_number: 15890418 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 253 26 257 285 73 27.0 5e-13 MSSSLKYLLLVAPAALMIAILFLYPLGFSLVSAFTAPGQPFTLDHFRKVYALYASDVLFS LIIVLVSVALLALIAITLSAVIALSPCRPVVRLLGFLYRLPLFIPFIVVAQMMRTFLAKN GLMNNALVAADLVTPLETLSWLGWKGIVITFVWKQLAFATLLICGAMAALESSQILAARN LGASRPRILFDIMLPQVLPTIGVALVLSTVTMMSVLSVPLMIGVGTPTMLTVDMAFRVNS YGDYAVANALGVVSLAICGALSWFYLRHSLQQKGGES >gi|289775105|gb|GG745512.1| GENE 262 292360 - 293499 1336 379 aa, chain - ## HITS:1 COG:YPO2029 KEGG:ns NR:ns ## COG: YPO2029 COG4134 # Protein_GI_number: 16122270 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Yersinia pestis # 127 313 124 311 360 72 26.0 2e-12 MLTKTKAAIVTTLFLSLGAQADTILNVATAGDQNMVDYVKTWLGPKFEAAHPGVKVRVIG TGPGDAGSNKISEKLTAQQESGAQQWDIDVAVVHQKAGGEQVEKGLLQKYRQDIQTGGMV SSPSATQALGVNVDGYVMPMFLSQTAIAWNSDLLSTPPASYDELVAWTQKHPQAFGYNGI KNGMSGVSFVVGWIYAYGTDAQRLSAGPYDKSVEKGWQQAYEKLKAFNKNVTFTPGNAGT LDMLSRGEIAMGPVWVDMFYSWKDQGKLPPSIKLALLAPGMPGQPMYYVIPAKAANPQLA RDFIALATSPEVQAQGIVKQFNWYPGIDAGQVKPKLDTATWQKLFAEISPEALAKYGKSF PIAPYFDDIKEGYESQVAN >gi|289775105|gb|GG745512.1| GENE 263 293529 - 294560 780 343 aa, chain - ## HITS:1 COG:mll3065 KEGG:ns NR:ns ## COG: mll3065 COG3842 # Protein_GI_number: 13472692 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Mesorhizobium loti # 3 301 5 312 354 258 45.0 2e-68 MSYLQITGLKISYGDNVVLHNIDLAVEQGEMIALLGPSGCGKTTLLNALCGFIPVQSGEM AIASRTITHLAPEQRNITMVFQSYALWPHLTVARNIGYGLKLRKWRGADIARRVAELLRI VNLEGLGEVKVTELSGGQRQRVALARALAIEPQVLVLDEPLSNLDAKVRLNVRHEIKSLQ KRLGFTSLIVTHDQQEALVMADRIAVLNQGRIEQTGTPEQIYQHPATPFVADFMGADNKI TSGELSAAAISGLSAAQQGEKVIYFRSADAALAELTQPAPQEGLALEGVVEQSAFLGNLY RHSVRCHDRLLLADAAQCWPTKSRVRLHVPTPALHIFPLPLSQ >gi|289775105|gb|GG745512.1| GENE 264 294723 - 295493 756 256 aa, chain + ## HITS:1 COG:no KEGG:KPK_5214 NR:ns ## KEGG: KPK_5214 # Name: not_defined # Def: metallo-beta-lactamase domain protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 256 1 256 256 513 99.0 1e-144 MKIDVLGCGSAFSCTQNTSALRVIDADNKQWLIDCGPTVPRALWQRGGGVNDIDAIYFTH VHPDHCTGLTALLNYWKSGSRQKPLIIYCQPAQQPVLMQLAALANWPQADPGFTIDWQEC REAWTWQDWQIRTAATQHELSNRAIRITIAGQTLFYSGDGRPTADSIALMAGAGLAFQEC TSVAALDDDASHGDFPSCLMLFRTLQLPALGLYHCEDAALSALKQACQPWQGLFVSQDGD HFTLPRPAFADEAHAL >gi|289775105|gb|GG745512.1| GENE 265 295490 - 296503 820 337 aa, chain + ## HITS:1 COG:SMb20154 KEGG:ns NR:ns ## COG: SMb20154 COG1609 # Protein_GI_number: 16263902 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 8 333 6 327 328 197 38.0 2e-50 MSPRKPSVTAQDVARLAGVSRAVVSRALSSNGSISPDARARVLRAAEELGYQVNFLAQGL NRQRSHLIGVIVSRISDPFRSALLDALLNEIQRQGFQALVSEIHSEQDLAHTLRRFTQFR VSGVIVTSGQPPEALVNECVQQHIPVVGINRQPTIPGVDYVCSDNVAGAELAADQLLRSG CRRFGWLNHSPSTWAGRMRGEAFSRALQARGVDVERNLAILACPEEGYTGGFQAAALADE ALEGIFCANAQIACGFLDGMRQRGKQAPEDYQLIGFDNTPPTAQYSYQLTTLHQDVAAIS RQALARLQERTVDPLQPSRTTWVEVTLIHRRTSPFII >gi|289775105|gb|GG745512.1| GENE 266 296514 - 297275 861 253 aa, chain + ## HITS:1 COG:BMEII0568 KEGG:ns NR:ns ## COG: BMEII0568 COG0483 # Protein_GI_number: 17988913 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Brucella melitensis # 12 239 19 252 266 173 41.0 2e-43 MTEAQRESLCALIRQAGAHAQALRDAGLQVDKKSRQDFVSQADLAVEQEIKGWLKAHFPQ EGFLGEESGFEGDEHTVWVLDPVDGTTNFILGMDYWCISLARVCQGELSLGIIYAPDRNE FFFAGRGEGAFLNGRRLTLREPDPDAVVIGMGRSSRAPASDYARAIDTLLDAGLEYRRFG AGALMLAHVAAGQIHGYFEAHMNSWDALAGMLLIEEAGGTCNAFLANEGLRQGNLVLAGC ASVQPRMAVLLVK >gi|289775105|gb|GG745512.1| GENE 267 297314 - 297667 276 117 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4794 NR:ns ## KEGG: Kvar_4794 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 117 1 117 117 241 100.0 1e-62 MKWTILNTLICPQSGIAFSAISSLRFLKFIMWYEADVILLPGESMKLYSSRVLINDQYHS LKIYNITVYDEAQWEKLRERPSCPYQAGGKQSDSCFFQSFCAIKRCPNNIPRGEPWR >gi|289775105|gb|GG745512.1| GENE 268 297938 - 298885 816 315 aa, chain - ## HITS:1 COG:AGl1152 KEGG:ns NR:ns ## COG: AGl1152 COG0583 # Protein_GI_number: 15890693 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 296 38 333 336 343 58.0 3e-94 MARRFDYLADVEVFLAVAERGSFTAGAVALSSTPSVLSRAVTRLETRLGCQLLRRSTRRI SLTEAGSAYLSQVRQAFEVLDNAERETQGQKGALSGRVKLSAPTTWGHYRLPARLALYRQ LHPDVQIELNITNRNVDIIAEGFDLVVRQGHLPDSGLVAKKLEDAALCLVASPAYLRSTA RPLSKIADLRHHSCLTFIMPATGKVAEWVFREDGRDISWLPTSSLHVSDDVLGVVSLALQ GAGICQSYAFIVQEAIARGELVPVLPAFAGRSRPFSVLYPPHKSQSAAARALITLLTMPA EALATLCATLPDAYG >gi|289775105|gb|GG745512.1| GENE 269 299015 - 300181 1025 388 aa, chain + ## HITS:1 COG:DR1790 KEGG:ns NR:ns ## COG: DR1790 COG3386 # Protein_GI_number: 15806791 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Deinococcus radiodurans # 55 375 51 372 388 107 29.0 5e-23 MHRFSLFVLGLLSLGQTALAAGPDAPAHLALWRSYTGVTWQQRVDAHSVNAPIAGLHFDA AGRAFVSTPRLISTQAPATLSLLDTKSLSGPARLTAFPSTAANSISADPRTHLRNVLGFY VDNRNGWLWALDQGFVAGEKTAPPGAQKIMIYALSDGHLVQRIPLDSVADREGSFLNDIV VDEARRVAYIADSGLRSAPDNQAGLIVADANRGTVRRVLNQHPALMPVAGLQVVSHGETV WPGNPIMLGINGIALSPDQETLYWTVTTGTTARTIATAALRDPAMNERQLAAAIRTAGEV GGNSDGIVVDKHGALYITDVTHNGIVRYRPQSGRFTLLAADDRVYWPDTPTIGPDGAVMF TASHLNQHFAQAVKPGEEKYTIWKVVQP >gi|289775105|gb|GG745512.1| GENE 270 300221 - 302644 2119 807 aa, chain - ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 807 1 810 810 1015 61.0 0 MLKKTHIISGLLIAPLTLYAATSYQVDDIRFEGLQRVTVGAALLSMPLHAGDAVTPEDVS EAVRALYASGNFENVQILRDGKTLVVQVKERPTIASVSFSGNKSVKDDALKENLTASGIS AGSALDRNSLSEIEKGLQDFYYSAGKYSAQVHAVVTPLPRNRVDLTFVFQEGISAKIAQI NIIGNQAFREETLLDQLQLRDNVPWWNVVADKKYQKQKLEAALETLRSFYLDRGYARFAI ESTQVSMTPDKKSLYITIALNEGERYRVDRTQVTGDLAQHGPEIEALAQPLAGAWYSGAQ VTTVENEIKKRFGKYGYAWPQVTTTPEIDDAHHRVALHIQVNAGRRYSVRQIRFSGNDTS RDAVLRREMRQMEGAWLNNEKVEQGKVRLDRTGFFENVEQQIVPVSGTADQVDVVYKVKE RNTGSFNVGLGFGTDSGVSYQLGVTQDNWLGTGNSVSFNGTRNSYQSYLELGATNPWFTV DGISLGGKIFYNSYDASDADAGSYNQQSYGLGSTLGFPISENNSLNLGLDYVHNRLTNMD PELTTWRYLSSRGIEPSVVTKDGDSGAKYSANDYFVSLGWGYNDLDRGFFPRAGNKSSLS GKVTLPGSDNSYYKLSFDTAQYLPLSENKRWVWMERLRAGYAGGLDGKSVPFYDNFYAGG SSSVRGFSSNTIGPKAAYYRCNGSESSYSACPLDASSDAVGGNAMAVLNSEFIIPTPFVN DKYADSLRTSLFVDAGTVWSTSWQNTAQTLAAGIPDYGDPGHIRLSAGIAVQWMSPLGPL VFSWAEPFKKYDGDKAEQFQFNIGKTW >gi|289775105|gb|GG745512.1| GENE 271 303270 - 305030 1029 586 aa, chain + ## HITS:1 COG:no KEGG:KPK_5223 NR:ns ## KEGG: KPK_5223 # Name: not_defined # Def: tannase/feruloyl esterase family protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 586 1 586 586 1180 100.0 0 MTRLLKTILPVILCTLFGLSFASPTQAAASLPMVLPALTCDALSATDFSAAVGAKVTINH TEMQTSAQGSWCKVSATIAPQIGVQIALPTQRWSQRFLQVGCGGLCGSINLSLSNASGCL PAMNGEFVVAATDMGHHGSMMDASWAEDPQKRIDFAWRANHLTAVLTKAVIQTLYRQQPK YAYFMGCSDGGREALMEAQRFPQDFDGISAGAPAAFFQFQNSFFHGWNVAANQRPDGTAI LLKDRLPLIHQAVLAHCPTLSGVQDGILQNPYACQFSESWLPRCPADAQDRSTCLTQEEI EVVKKLYRGAYDSHGAQFVAGGLPLGSELRWPVPETPTGHSMSEMMVLPALQSVLLPGGK QKIQSMRDFPLNQQNFDAVAQLAPLYNAANTNLHAYQQRGGKLILWHGLADDSVSPAFSI AYYRGVEAEMGHAATDTFLRLFLLPGVAHCGNGEGYDQIDLLTPLMRWTEEGIAPQEIMA GKRAPAATSLPPMTEKPDAQTQFHGVQKVSQPFADAAPAVIATRPAYPFPAIARYNGHGD VNDGENYHAEQSTAFGHLQLAKPASDYIGPDNQKNYQVRHGELTVQ >gi|289775105|gb|GG745512.1| GENE 272 305064 - 305432 262 122 aa, chain + ## HITS:1 COG:STM0581 KEGG:ns NR:ns ## COG: STM0581 COG2207 # Protein_GI_number: 16763958 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 11 117 2 107 113 81 37.0 3e-16 MGLAAIMRSKTLQQSVLNDLLLWIDNNLDKKLTVDDLSDISGYSPWHLFRLFRHYFDRSP MEYIRQQRMSLCCRLLLTTPGYRIVDICMMVGYDDLSAFNRTFKKYYALTPTQYRYQITR QK >gi|289775105|gb|GG745512.1| GENE 273 305696 - 307954 2538 752 aa, chain - ## HITS:1 COG:STM0585 KEGG:ns NR:ns ## COG: STM0585 COG4771 # Protein_GI_number: 16763962 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 35 752 27 751 751 1051 73.0 0 MKYTSHFPLGIVIPLLACSVPLQAAENMTEQSTRDKSTPTAENQEETMVVTAARQNLQAP GVSTITAEEIRKHPPARDVSELIRTQPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLVLV DGKPVTSRNSVRYGWRGDRDSRGDTSWVPAEMIDHIDVIRGPAAARYGNGAMGGVVNIVT KPTTPEWHGSWNTYMNAPQHRKEGATKRTNFSLNGPLSDSVSFNLWGNLSKTQADAQDIN AGHEAERTGSYAGSYPAGREGVVNKDIHSKLRWEFAPMQALEFEAGYSRQGNLYAGDTQN TNTSTLVKSMYGKETNRLYRQTYGVTWTGGWDNGVTSNSYAQYEHTRNSRMNEGLAGGTE GIFSSSEFSDIDLADVLLHSEVNIPFTLGVDQNLTLGTEWNQQRMKDGVSTTQALSYGTI DGVSATGRSPYSSAEIFSLFTEDNMALTDSTMLTPALRFDHHSIVGNNWSPSLNLSQELT DDWTLKLGIARAYKAPNLYQLNPNYILYSNGQGCYASSSACYLMGNSDLKAETSVNKEIG LEYKHDGYQAGITWFRNDYHNKIESGYAAVGTASNGTTNIYQWENVPKALVEGLEGTLNL PVGETVNWSNNLTWMLQSKNKTTGDRLSVIPQFTLNSTLSWQVREDLSLQSTFTWYGRQK PKRFNYKGEAVSGSELNEVSPYSIVGLSATWDVNKNLSFTSGIDNLFDIRHYRAGNAQTT GNATTGAYLYGAGAETYNESGRTFFMSVNTHF >gi|289775105|gb|GG745512.1| GENE 274 308543 - 310123 1537 526 aa, chain + ## HITS:1 COG:PA2865 KEGG:ns NR:ns ## COG: PA2865 COG4623 # Protein_GI_number: 15598061 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Pseudomonas aeruginosa # 53 498 34 474 476 223 30.0 5e-58 MNANLLSRLFIAWLTCLAPLLFAPILLAAEAEKAPPVATEDNTLSIHIDDMLQPWKGDLP GMTERRTIRVLTTYSKTFFFIDKGTQRGATHDIFMALENDLNKQLAKDKKLKQRHLKLHI VFVPVSRDNLFIALNEGKGDIAAANLTITPSREAVVDFAQPLYSNVKELLISGPASPKVD SLEQLSGQTVFVRRSSSYYESLQALNARFASESRPPVILEAAPEALEDEDLLEMLNAGLI PLIVVDQHKAVFWKQVFPKIQVHDNVVLRDGGNIAWAVRKDSPQLLAVLNNFVKKNRQGT TLGNTLLLRYLKNAKYVKNAAASKERRKFLAMVEVFRKYGDRYDVDWLLMAAQGYQESRL NQSVRSHVGAVGVMQVMPSTGKELKVGDIKQLDPNIHAGVKYMRWMIDRYYADEPMTRLD KALFAFASYNAGPARIARLRTMTKQRGFDPNVWFGNVENLAAEKIGAETVTYVSNIYKYY IAYRLIVDDMARKQKATAAPRQEPAAEPVKPQPSVATPETAQAPSA >gi|289775105|gb|GG745512.1| GENE 275 310274 - 310801 578 175 aa, chain - ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 175 1 178 178 249 92.0 2e-66 MASRGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTEWHRVVL FGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQGGG APAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQAPAAPSSNEPPMDFDDDIPF >gi|289775105|gb|GG745512.1| GENE 276 311053 - 313878 4003 941 aa, chain + ## HITS:1 COG:STM4254 KEGG:ns NR:ns ## COG: STM4254 COG0178 # Protein_GI_number: 16767504 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Salmonella typhimurium LT2 # 1 941 1 941 941 1865 97.0 0 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC PDHDVPLAAQTVSQMVDNVLAQPEGLRLMLLAPIIKERKGEHTKTLENLASQGYIRARID GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLAQRLAESFETALELSGGTAIVANMDDE KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNPEL SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWGTLSASVQKVVLYGSGKENIEFKY MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCDGTRLRREARH VFVENTPLPTISDMSIGHAMDFFNNLKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLTL SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLDAIMAVPESLTGQFMSGKRKIEV PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK >gi|289775105|gb|GG745512.1| GENE 277 313879 - 314235 394 118 aa, chain - ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 116 1 115 118 183 86.0 8e-47 MTISELLQYCMAKPGAEQSVHSDWKATQIKVSDVLFAMVKEVEDQRPAVALKASPELAEL LREQHRDVRPSKHLNKAHWSTVFLDGSLPDSQIYYLVDASYQQAVKMLPESVRQQLSR >gi|289775105|gb|GG745512.1| GENE 278 314239 - 314655 474 138 aa, chain - ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 224 77.0 4e-59 MWYQQTLTLGPKSRGFHLVTDEVLGQIRGLSGVKVGLLHLLLQHTSASLTLNENCDPTVR YDMEQYFLNAVPDNAPYEHDYEGPDDMPSHIKSSMLGVSLMLPVEDGRVRLGTWQGIWLG EHRIHGGSRHIVATLMGE >gi|289775105|gb|GG745512.1| GENE 279 314786 - 315499 983 237 aa, chain - ## HITS:1 COG:aphA KEGG:ns NR:ns ## COG: aphA COG3700 # Protein_GI_number: 16131881 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Escherichia coli K12 # 1 237 1 237 237 397 82.0 1e-111 MRKLTLAFAAASLLFTLNSAVVARASTPQPLWVGTNVAQLAEQAPIHWVSVAQIENSLLG RPPMAVGFDIDDTVLFSSPGFWRGQKTFSPGSEDYLKNPQFWEKMNNGWDEFSMPKEVAR QLIAMHVKRGDSIWFVTGRSQTKTETVSKTLQDDFLIPAANMNPVIFAGDKPGQNTKTQW LQAKQIKVFYGDSDNDITAAREAGARGIRVLRAANSSYKPLPMAGALGEEVIVNSEY >gi|289775105|gb|GG745512.1| GENE 280 315693 - 316886 1638 397 aa, chain - ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 397 1 397 397 691 84.0 0 MFQKVDAYAGDPILSLMERFKEDPRSDKVNLSIGLYYNDDGIIPQLQAVAEAEARLNAGP HGASLYLPMEGLSGYRQAIAPLLFGAEHTALKQNRIASIQTVGGSGALKVGADFLKRYFP ESHVWVSDPTWENHIAIFEGAGFEVSTYPWFDKATNGVRFEDLLATLQTLPARDIVLLHP CCHNPTGADLTPAQWDRVVEVLQARQLIPFLDIAYQGFGGGLEEDAYAIRAIASAGMPML VSNSFSKIFSLYGERVGGLSVVCEDSETAGRVLGQLKATVRRNYSSPPSFGAQVVATVLN DAALKATWQAEVDAMRAHILTMRQALVDALQQVAPGSKVDYLLKQRGMFSYTGFSAAQVD RLRDEFGVYLIASGRMCVAGLNSRNVQQVAKAFAAVM >gi|289775105|gb|GG745512.1| GENE 281 317063 - 318142 1265 359 aa, chain - ## HITS:1 COG:alr KEGG:ns NR:ns ## COG: alr COG0787 # Protein_GI_number: 16131879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli K12 # 1 359 1 359 359 654 89.0 0 MQAATVVINRRALRHNLQRLRDLAPASKLVAVVKANAYGHGLLETARTLTDADAFGVARL EEALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVW MKLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTT FTEGKPGLRSIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGKDFGCQPVMTLTSS LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGR VAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRLTSRVAMKYLD >gi|289775105|gb|GG745512.1| GENE 282 318174 - 319589 1885 471 aa, chain - ## HITS:1 COG:dnaB KEGG:ns NR:ns ## COG: dnaB COG0305 # Protein_GI_number: 16131878 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli K12 # 1 471 1 471 471 876 98.0 0 MAGNKPFNKPQTETRERDPQLAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVSEDF YTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANIS AYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPK NIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTRIRTGQLDDEDWARISGT MGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPSLSDNRTLE IAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR DEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE >gi|289775105|gb|GG745512.1| GENE 283 319759 - 320742 1191 327 aa, chain + ## HITS:1 COG:STM4245 KEGG:ns NR:ns ## COG: STM4245 COG0604 # Protein_GI_number: 16767495 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 327 1 327 327 565 87.0 1e-161 MATRIEFSKHGGPEVLQAVEFTPRDPAEHEIQVENKAIGINYIDTYVRSGLYPPPSLPSG LGTEAAGVVSKVGHGVTHIKVGDRVVYAQSALGAYSTVHNVLADKAAVLPDAISFEQAAA SFLKGLTVWYLLRKTYEIKPNEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQR AKEAGAWQVINYREEQIVERLKALTDGKKVAVVYDSVGKDTWEASLDCLQRRGLMVSFGN SSGPVTGVNLGILNQKGSLYVTRPSLQGYITNREELAEACSELFSLIASGVIKVDVPESQ TYPLTEARRAHEVLESRVTQGSSLLLP >gi|289775105|gb|GG745512.1| GENE 284 320924 - 321166 363 80 aa, chain - ## HITS:1 COG:no KEGG:KP1_0292 NR:ns ## KEGG: KP1_0292 # Name: pspG # Def: phage shock protein G # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 80 11 90 90 107 97.0 2e-22 MLELLFVIGFFVMLLVTGVSLLGIIAAIVVATALMFVGGLFALMIKLLPWLLLAVVVVWI IRALKSSNGNAFRDNNRWRY >gi|289775105|gb|GG745512.1| GENE 285 321306 - 322247 1455 313 aa, chain - ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 1 313 33 345 345 626 93.0 1e-179 MLDWTDRHCRYFLRLLSRHTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPQA LAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAPLVADCIKAMRDVVSIPVTV KTRIGIDDQDSYEFLCEFIETVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVW QLKRDFPHLTMAINGGIKSLDEARLQLEHMDGVMVGREAYQNPGILASVDREIFGIAGAD ADPVAVVRAMYPYIERELSNGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADIA VLEHALKLVADKR >gi|289775105|gb|GG745512.1| GENE 286 322405 - 322893 485 162 aa, chain - ## HITS:1 COG:VCA0258 KEGG:ns NR:ns ## COG: VCA0258 COG3837 # Protein_GI_number: 15601026 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Vibrio cholerae # 1 161 1 162 170 155 49.0 3e-38 MKRPDCIRHWRELEGPDDATYPDSPERFSIGAPLGRGLRLNRLGIHHERLPPGRRTSYPH AESDEEEFIYVLEGYPEVWINGYLWKLEPGDSVGFPAGTGICHTFLNNTEQEVRLLVVGE ANKKYNRIYYPLNPGYAATRQDRWVDHPPQFFGPHDGKPRKK >gi|289775105|gb|GG745512.1| GENE 287 323143 - 323658 549 171 aa, chain + ## HITS:1 COG:STM4241 KEGG:ns NR:ns ## COG: STM4241 COG0735 # Protein_GI_number: 16767491 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 291 86.0 5e-79 MDKTPSQEMLAHAEKLCAQRGVRLTPQRLEVLRLMSLQQGAISAYDLLDLLRDKEPQAKP PTVYRALEFLLEQGFVHKVESTNSYVLCHLFDQPTHSSAMFICDRCGVVKEEAAEGVEDI MHTLAARMGFALRHNVIEAHGLCADCVEVEACSTPGHCQHDHSIQLKKKAR >gi|289775105|gb|GG745512.1| GENE 288 323754 - 323963 333 69 aa, chain - ## HITS:1 COG:STM4240 KEGG:ns NR:ns ## COG: STM4240 COG3237 # Protein_GI_number: 16767490 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 69 2 70 70 87 88.0 4e-18 MNKDEIGGNWKQLKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYAKDQAEKEVSD WEHKNDYRW >gi|289775105|gb|GG745512.1| GENE 289 324199 - 325515 1879 438 aa, chain - ## HITS:1 COG:STM4238 KEGG:ns NR:ns ## COG: STM4238 COG0534 # Protein_GI_number: 16767488 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 2 438 3 439 441 597 85.0 1e-170 MLLNAADKALWRLAIPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFML LLFLRMSTTGLTAQAWGAKDPLRLARALVQPLALALGAGVLIILFRLPLINLALHIVGGS EAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNLLNIVLDLWLVM GLRMNVQGAALATVTAEYATLIIGLMMAKRVLTLRGVSLAMLKNAWRGDLRRLLALNRDI MLRSLLLQLCFGALTVYGARLGSDIVAVNAVLMTMLTFTAYALDGFAYAVEAHSGQAYGA RDGSQLLEVWRAACRQSGMVALAFALIYSLAGEYIIALLTSLPSLQQLADRYLIWQAILP VVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGFAVTLLSVPLLGNHGLWLALAVFLALRG LSLALIWRRHWRHGTWFS >gi|289775105|gb|GG745512.1| GENE 290 325585 - 326193 696 202 aa, chain - ## HITS:1 COG:ECs5026 KEGG:ns NR:ns ## COG: ECs5026 COG1974 # Protein_GI_number: 15834280 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 202 1 202 202 367 95.0 1e-102 MKALTTRQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGAIEIVS GASRGIRLLTEEEHGLPLIGRVAAGEPLLAQQHIEGHYQVDPSMFKPNADFLLRVSGMSM KDIGILDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNVVELLPENSEFTPIVVD LRQQSFTIEGLAVGVIRNGEWL >gi|289775105|gb|GG745512.1| GENE 291 326316 - 326684 408 122 aa, chain - ## HITS:1 COG:STM4236 KEGG:ns NR:ns ## COG: STM4236 COG0818 # Protein_GI_number: 16767486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Salmonella typhimurium LT2 # 1 121 1 121 122 181 85.0 2e-46 MANNTTGLTRIIKAAGYSWKGFRAAWINEAAFRQEGIAAIVAVAIACWLDVDAITRVLLI GSVLLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLLAIIIALITWGTLLWSH YH >gi|289775105|gb|GG745512.1| GENE 292 326813 - 329236 3462 807 aa, chain + ## HITS:1 COG:STM4235 KEGG:ns NR:ns ## COG: STM4235 COG2937 # Protein_GI_number: 16767485 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 806 1 806 806 1484 91.0 0 MSGWQRIYYKLLNLPLRVLVKSKSIPAEPAQELGLDTSRPVMYVLPYNSKADLLTLRAQC LAHDLPDPLEPLEIDGALLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRNHPDLDV QMVPVSVMFGRSPGREKGEVNPPLRMLNGIQKFFAVSWLGRDSFVRFSPSVSLRRMADEH GTDKIIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASKAIARAVEDEARSKKIS HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHEI VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNK LYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLV PIYIGYEHVMEVGTYAKELRGATKEKESLPQMVRGLSKLRNLGQGYVNFGEPLPLMTYLN HHVPEWREAIDPIEAIRPSWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSL TREQLTQQLECYLALLRNVPYSPDATTPSASASELIDHALQMNKFEVEKDTIGDIIILPR EQAVLMTYYRNNIAHMLVIPSLLAALVTQHRQLSRTEVLRHVETLYPFLKAELFLRWEKA ELAGVVDALIAEMLRQELIVVDGEVMSLNPSHSRSLQLLAAGARETLQRYAITFWLLSAN PSINRSSLEKESRTVAQRLSVLHGINAPEFFDKAVFSTLVLTLRDEGYISDTGDAEPEET LKVYRMLADLITSDVRLTIESVTQDDA >gi|289775105|gb|GG745512.1| GENE 293 329294 - 330160 1376 288 aa, chain - ## HITS:1 COG:ECs5023 KEGG:ns NR:ns ## COG: ECs5023 COG0382 # Protein_GI_number: 15834277 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Escherichia coli O157:H7 # 1 287 1 287 290 459 89.0 1e-129 MEWSLSQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVASPGVPPLWILAVFVAGVWLMR AAGCVVNDYADRKFDGHVKRTARRPLPSGDVTEKEARTLFIVLVLLSFLLVLTLNTMTIL LSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFSAVSESLPLSCWLMFLANILWA VAYDTQYAMVDRDDDVKIGIKSTAILFGENDRLIIGILQVAVLALMGAVGWLNGLGWEYY WSLFVAAGLFGWQQKLIFNRERDNCFKAFMNNNYVGLVLFLGLAMSYL >gi|289775105|gb|GG745512.1| GENE 294 330173 - 330670 416 165 aa, chain - ## HITS:1 COG:ubiC KEGG:ns NR:ns ## COG: ubiC COG3161 # Protein_GI_number: 16131865 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Escherichia coli K12 # 1 165 38 202 202 251 79.0 4e-67 MSHPALTRLRALRYFAVMPSLAPPLSDWLLLEDSMTQRFEQQGKQVTVTLINEGYIEREA LTDEAALLPDEPRYWLREIILNADGEPWLAGRTVVPESTLCGPELALQQLGQIPLGRYLF TSSTLTRDFIEIGRDAALWGRRSRLRLSGKPLLLTELFLPASPLY >gi|289775105|gb|GG745512.1| GENE 295 330858 - 331781 962 307 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4822 NR:ns ## KEGG: Kvar_4822 # Name: not_defined # Def: maltose operon periplasmic # Organism: K.variicola # Pathway: not_defined # 1 307 3 309 309 518 100.0 1e-145 MKKTLVALCLSAGMLACVPGMSLADVNFVPQNTSAAPSIPASALQQLIWTPADQSKTQSV DLTTGGQRLDVPGIVGPVAAWSVPANIGELTLTLDSELNKHKQIFAPNVLILDQNMTPAA FFPSNYFTYQQPGVMTADRLGGVMRLTPALGQQKLYVLVFTTEKDLQQTTTLLDPAKAYA KGAGNAAPDIPDPIAKHTTDGVLKLKVKTNSTSSVLVGPLFGSSGPGPVTVGNTAAPVAA PAAAAAAAPAAKSEPMLSDTETYFNNGIKQAVKQGDIDKALKLMNEAERLGSKSARSTFI SSVKGKG >gi|289775105|gb|GG745512.1| GENE 296 331902 - 333188 1751 428 aa, chain - ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 1 428 1 423 423 630 75.0 1e-180 MITLRKLPLAVAVAAGVMSAQALAVDFHGYARSGIGWTGSGGEQQCFKATGAQSKYRLGN ECETYAELKLGQELWKEGDKSFYFDTNVAYSVNQEDDWESTSPAFREANIQGKNLIDWLP GSTLWAGKRFYQRHDVHMIDFYYWDISGPGAGLENVDLGFGKLSLAATRNSESGGSYTFS SDDTKKYAAKTANDVFDIRLAGLETNPGGVLELGVDYGRANPQDDYRLEDGASKDGWMWT GEHTQSIWGGFNKFVVQYATDAMTSWNSGHSQGTSIDNNGSMIRVLDHGAMDFNDDWGLM YVAMYQDVDLDSKNGSTWYTVGVRPMYKWTPIMSTQLEIGYDNVKSQRTSENNNQYKITL AQQWQAGNSVWSRPAIRIFATYAKWDENWGYSNASGLQTKDSSGSGMYTSSRGDDSEVTF GAQMEVWW >gi|289775105|gb|GG745512.1| GENE 297 333277 - 334386 1273 369 aa, chain - ## HITS:1 COG:STM4230 KEGG:ns NR:ns ## COG: STM4230 COG3839 # Protein_GI_number: 16767480 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 369 1 369 369 700 95.0 0 MASVQLRNVTKAWGDVVVSKDINLEIQDGEFVVFVGPSGCGKSTLLRMIAGLETVTSGDL FIGDTRMNDVPPAERGIGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVTQVAEV LQLAHLLERKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH KRLARTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN FLPVKVTATAIDQVQVELPNRQQVWLPVDSANVQVGANMSLGIRPEHLLPSDIADVTLEG EVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTAC RRLHKEPGV >gi|289775105|gb|GG745512.1| GENE 298 334757 - 335947 1605 396 aa, chain + ## HITS:1 COG:ECs5017 KEGG:ns NR:ns ## COG: ECs5017 COG2182 # Protein_GI_number: 15834271 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 729 93.0 0 MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK VSVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTW DAVRFNGKLIAYPVAVEALSLIYNKDLVPNPPKTWEEIPALDKALKAKGKSALMFNLQEP YFTWPLIAADGGYAFKFENGKYDVKNVGVDSAGAKAGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWSNIDKSKVNYGVALLPTFKGKPSKPFVGVLSAGINAASPNKE LAKEFLENYLMTDQGLEAVNNDKPLGAVALKSFQEKLEKDPRIAATMANAQNGEIMPNIP QMSAFWYAVRTAVINAASGRQTVDAALKDAQSRITK >gi|289775105|gb|GG745512.1| GENE 299 336065 - 337609 2434 514 aa, chain + ## HITS:1 COG:STM4228 KEGG:ns NR:ns ## COG: STM4228 COG1175 # Protein_GI_number: 16767478 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 514 1 514 514 895 91.0 0 MDAVKKKHWWQSPQLTWSVIGLLCLLVGYLVVLMYAQGEYLFAIMTLILSSVGLYIFANR KAYAWRYVYPGLAGMGLFVLFPLICTIAIAFTNYSSTNQLTFERAQQVLMDRSFQAGKAY NFTLIPAGDEWKLALTDGESGKNYLSDAFKFGGEQKLALKETDALPEGERVSLRVITQNR TALNQLTAVLPDDSKVIMSSLRQFSGTQPLYTLSEDGVLTNNQTHVKYRPNNDVGFYQAI NADGSWGTEKLSPGYTVTIGWDNFTRVFQDEGIQKPFFAIFVWTVVFSVLTVILTVAVGM VLACLVQWEALKGKAIYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGIKPA WFSDPTTARTMIIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTYRIAFEGGG GQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD >gi|289775105|gb|GG745512.1| GENE 300 337766 - 338656 1432 296 aa, chain + ## HITS:1 COG:STM4227 KEGG:ns NR:ns ## COG: STM4227 COG3833 # Protein_GI_number: 16767477 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 512 96.0 1e-145 MAMVQPKSQKLRLFTTHLLLLIFIAAIMFPLLMVIAISLREGNFATGSLIPDTISWEHWR LALGFSVEHADGRVTPPPFPVLLWLWNSIKVAGITAIGIVALSTTCAYAFARMRFPGKAT LLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFVGLNTHGGVIFAYMGGIALHVWTIKGY FETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVNGLTAGGVKG >gi|289775105|gb|GG745512.1| GENE 301 338850 - 339260 634 136 aa, chain - ## HITS:1 COG:yjbA KEGG:ns NR:ns ## COG: yjbA COG3223 # Protein_GI_number: 16131856 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 136 1 136 136 174 85.0 3e-44 MSSVYRPLVNFIATAMQTVLNLGLLCLGIILIVFLGKETLHLADVLFTPEPTSKYRLVEG LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIIDHESPMAVLIYSAAILI LVITLWLCNSNRLKRE >gi|289775105|gb|GG745512.1| GENE 302 339405 - 339914 571 169 aa, chain + ## HITS:1 COG:CC2073 KEGG:ns NR:ns ## COG: CC2073 COG0454 # Protein_GI_number: 16126312 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Caulobacter vibrioides # 4 167 12 177 178 58 29.0 8e-09 MLKIRTARAEDAALLNEMGNASYRHHFAHLWHNADELACYLQQEYSLASLQRSLTDSQCC WLIAEAPHPVGFAKYACRQAISPEGPSGTLLHKLYLLPDTTGRRYGEQIFRAVEARAKAA GERWLWLEVLADNPAARRFYERQGMQHVKDVAFHSASQQSTLHILAKPI >gi|289775105|gb|GG745512.1| GENE 303 339923 - 340378 525 151 aa, chain + ## HITS:1 COG:TM0759 KEGG:ns NR:ns ## COG: TM0759 COG0110 # Protein_GI_number: 15643522 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Thermotoga maritima # 12 149 85 235 254 64 32.0 8e-11 MHTLRETAIRNVTSGENVVIYQPANLYDCVLGDNVFVGPFVEIQGNTRIGANSKIQSHTF ICEYVTIGQRCFIGHGVMFANDLFRDGKPNADRASWGRIEIGDDVSIGSGATILAVSICD GVVIGAGSVVTKSITEKGVWAGNPARLLRRL >gi|289775105|gb|GG745512.1| GENE 304 340426 - 342075 2367 549 aa, chain - ## HITS:1 COG:STM4221 KEGG:ns NR:ns ## COG: STM4221 COG0166 # Protein_GI_number: 16767471 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 549 1 549 549 1085 95.0 0 MKNINPTQTSAWQALQKHFDEMKDVTISELFAKDSDRFSKFSATFDDLMLVDFSKNRITE ETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIVVDGKDVMPEV NAVLEKMKTFSEAIISGSWKGYTGKPITDVVNIGIGGSDLGPFMVTEALRPYKNHLNMHF VSNVDGTHIAEVLKNVDPETTLFLVASKTFTTQETMTNAHSARDWFLATAGDDKHVAKHF AALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIILSVGFDNFVELLSGAHAM DKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKY VDRNGHAVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHPKL LSNFFAQTEALAFGKSREVVEQEYRDQGKDPATLEHVVPFKVFEGNRPTNSILLREITPF SLGALIALYEHKIFTQGAILNIFTFDQWGVELGKQLANRILPELKDGSEVSSHDSSTNGL INRYKAWRA >gi|289775105|gb|GG745512.1| GENE 305 342840 - 344189 1928 449 aa, chain + ## HITS:1 COG:lysC KEGG:ns NR:ns ## COG: lysC COG0527 # Protein_GI_number: 16131850 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 449 1 449 449 705 87.0 0 MTDLVVAKFGGTSVADFDAMNRSIDVALLDANTRIVVLSASAGVTNILVALAGGLEPTER FSQLDALRQIQFNILERLRYPNVIREEIERLLENITTLAEAAALASSTALTDELVSHGEL MSTLLFVEILRERGIQAQWFDARKVLRTNDRFGRAEPDIAAVAELTQQQLAPRLAEGLVV TQGFIGSEAKGRTTTLGRGGSDYTAALLGEALNATRVDIWTDVPGIYTTDPRVAPAAKRI DVIAFEEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKEPKAGGTLVCKTTENPPLFR ALALRRRQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTMDTTGSTS AGDTLLTQALLTELSSLCRVEVEEDLALVALIGNELSKACGVGKEVFGVLEPFNIRMICY GASSHNLCFLVPGADAEKVVQKLHHNLFE >gi|289775105|gb|GG745512.1| GENE 306 344329 - 345258 1334 309 aa, chain + ## HITS:1 COG:STM4195 KEGG:ns NR:ns ## COG: STM4195 COG0385 # Protein_GI_number: 16767445 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Salmonella typhimurium LT2 # 1 306 1 306 313 432 90.0 1e-121 MLATLTRLFPLWALLLSVLAYYTPTTFTPIGPWVTTLLMLIMFGMGVHLKLEDFKRVLSR PAPVAAGIFLHYLVMPLAAWLLALLFHMPPELSAGMVLVGSVASGTASNVMIFLAKGDVA LSVTISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSILQIVVIPIALGLIVHHLLPK VVKAVEPFLPAFSMVCILAIISAVVAGSAAHIASVGLVVIIAVILHNTIGLLGGYWGGRL FGFDESTCRTLAIEVGMQNSGLAAALGKIYFGPLAALPGALFSVWHNLSGSLLAGYWSGK PIAKKADKR >gi|289775105|gb|GG745512.1| GENE 307 345295 - 345633 319 112 aa, chain - ## HITS:1 COG:STM3907 KEGG:ns NR:ns ## COG: STM3907 COG5606 # Protein_GI_number: 16767183 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Salmonella typhimurium LT2 # 9 112 9 112 113 116 54.0 9e-27 MNRKRVDGIRHVTSEESNIFSELGFDDADAEQLRGQAEKEVEQLMALKRQLMQEIAEWID EHQLKQADAAAKLSISRPRISDVVNQKTSKFTLDALVMMLMKLGKPVRLQIG >gi|289775105|gb|GG745512.1| GENE 308 345630 - 345986 58 118 aa, chain - ## HITS:1 COG:XF1573 KEGG:ns NR:ns ## COG: XF1573 COG4679 # Protein_GI_number: 15838174 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Xylella fastidiosa 9a5c # 11 113 7 109 112 110 50.0 7e-25 MLNQQQRLRRIVWMGSSFDDLRQFPEDVRRDAGFQLYRLQSGLEAADWKAMPQLGRGVEE IRLRHFSGAYRVIYLARFAEAIYVLHCFNKKTRRTAEHEKQIVRNRLQVIQQEHRSHK >gi|289775105|gb|GG745512.1| GENE 309 346186 - 346458 321 90 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4836 NR:ns ## KEGG: Kvar_4836 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 90 1 90 90 108 98.0 8e-23 MALPRITQKEMTEREQRELKTLLDRARIAHGRPLSNAETNSVKKEYIDKLMAQREAEAKK ARQVKKQQAYKTDKEATFSWSANTPTRGRR >gi|289775105|gb|GG745512.1| GENE 310 346455 - 347330 1030 291 aa, chain - ## HITS:1 COG:ECs5005 KEGG:ns NR:ns ## COG: ECs5005 COG1187 # Protein_GI_number: 15834259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 291 1 290 290 483 92.0 1e-136 MLPDSSTRLNKYISESGICSRREADRFIEQGNVFINGKRATIGDQVKPGDLVKVNGRLIE PREADDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRIFPIGRLDKDSQGLIFLTNHG DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLTGIPLGEWRDLTDDELIDLFKLIENSS SEAKPKARPKAKAATPGIKRPVVKMENSNDKGRPAANGKRFTQPGRKKKGR >gi|289775105|gb|GG745512.1| GENE 311 347674 - 348627 1300 317 aa, chain + ## HITS:1 COG:ECs5004 KEGG:ns NR:ns ## COG: ECs5004 COG2390 # Protein_GI_number: 15834258 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli O157:H7 # 3 317 1 315 315 558 86.0 1e-159 MTMENSDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYD YNENLWLEQQLKQKFGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWG RAVRSLVENLPQASQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPA LLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNAR HVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGR YINCLVTNRETAELLLK >gi|289775105|gb|GG745512.1| GENE 312 348698 - 349501 195 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 264 1 240 242 79 28 1e-13 MNTWLNLKDNVIIVTGGASGIGLAIVDELLSQGAHVQMIDIHGGGRHHNGDNYHFWPTDI SSATEVQQTIDAIIQRWSRIDGLVNNAGVNFPRLLVDEKAPAGRYELNEAAFEKMVNINQ KGVFFMSQAVARQMVKQRAGVIVNVSSESGLEGSEGQSCYAATKAALNSFTRSWSKELGK YGIRVVGVAPGILEKTGLRTPEYEEALAWTRNITVEQLREGYTKNAIPIGRAGKLSEVAD FVCYLLSARASYITGVTTNIAGGKTRG >gi|289775105|gb|GG745512.1| GENE 313 349511 - 349918 488 135 aa, chain + ## HITS:1 COG:ECs5002 KEGG:ns NR:ns ## COG: ECs5002 COG2893 # Protein_GI_number: 15834256 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 189 71.0 2e-48 MVHAIFCAHGQLAGAMLDSVCMVYGEVNVSAVAFVPGENAADIAINLEKLVSAHTDEEWV IAVDLQCGSPWNAAAGLAMRHPQIRVISGLSLPLALELVDNQHTLSADDLCQHLQAIASQ CCVVWQQPETVEEEF >gi|289775105|gb|GG745512.1| GENE 314 349918 - 350412 470 164 aa, chain + ## HITS:1 COG:ECs5001 KEGG:ns NR:ns ## COG: ECs5001 COG3444 # Protein_GI_number: 15834255 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 159 1 159 164 273 86.0 7e-74 MQITLARIDDRLIHGQVTTVWSKVANAQRIIICNDDVFNDEVRRTLLRQAAPPGMKVNVV SLEKAVAVYHNPQYQDETVFYLFTNPHDVLTMVRQGVQIATLNIGGMAWRPGKKQLTKAV SLDPQDIQAFRELDKLGVKLDLRVVASDPSVNILDKINETAFCE >gi|289775105|gb|GG745512.1| GENE 315 350478 - 351278 1039 266 aa, chain + ## HITS:1 COG:ECs5000 KEGG:ns NR:ns ## COG: ECs5000 COG3715 # Protein_GI_number: 15834254 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 265 265 409 92.0 1e-114 MEISTLQIIAIFIFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGVMLGGTLELIA LGWMNVGAAQSPDSALASIISAILVIVGHQSIATGIAIALPVAAAGQVLTVFARTITVVF QHAADKAAEEARFRTIDLLHVSALGVQALRVAIPALVVSLFVSADMVSSMLSAIPEFVTR GLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDFSLLAFGGVGVIIALIYIQ LNPQWRKAEPAASTAPSAPALDQLDD >gi|289775105|gb|GG745512.1| GENE 316 351290 - 352114 1141 274 aa, chain + ## HITS:1 COG:Z5614 KEGG:ns NR:ns ## COG: Z5614 COG3716 # Protein_GI_number: 15804609 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 EDL933 # 1 274 1 274 274 479 95.0 1e-135 MEQKKITQGDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIKRLYPLKADQVAALKRH LVFFNTTPAVCGPVIGVTAAMEEARANGAAIDDGAINGIKVGLMGPLAGVGDPLVWGTLR PITAALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQLGFRKGVNIVSDMGGNLLQKL TEGASILGLFVMGVLVTKWTTINVPLVVSQTPGADGATVTMTVQNILDQLCPGLLALGLT LLMVRLLNKKVNPVWLIFALFGLGIIGNALGFLS >gi|289775105|gb|GG745512.1| GENE 317 352187 - 353419 1567 410 aa, chain + ## HITS:1 COG:Z5613 KEGG:ns NR:ns ## COG: Z5613 COG1063 # Protein_GI_number: 15804608 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 4 410 7 413 413 742 86.0 0 MQTTTALRLYGKRDLRLETFTLPAMQDDEILARVVTDSLCLSSWKEANQGADHKKVPDDV ATRPIIIGHEFCGEILAVGKKWQHKFQPGQRYVIQANLQLPDRPDCPGYSFPWIGGEATH VVIPNEVMAQDCLLTWEGDTWFEGSLVEPLSCVIGAFNANYHLQEGSYNHVMGIRPQGRT LILGGTGPMGLLAIDYALHGPINPSLLVVTDTNKPKLSYARRHYPSEPQTLIHYLDGHEA SRDTLLALSGGHGFDDIFVFVPNEQLITLASSLLAPDGCLNFFAGPQDKQFSAPINFYDV HYAFTHYVGTSGGNTDDMRAAVALMQAKKVQTAKVVTHILGLNAAGETTLDLPAVGGGKK LVYTGKAFPLTPLGEIADPELAAIVARHHGIWSQEAEAYLLAHAEDITHD >gi|289775105|gb|GG745512.1| GENE 318 353412 - 354221 946 269 aa, chain + ## HITS:1 COG:PM1429 KEGG:ns NR:ns ## COG: PM1429 COG0169 # Protein_GI_number: 15603294 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Pasteurella multocida # 1 269 1 268 270 367 68.0 1e-101 MINRDTLLCISLAGRPGNFGTRFHNYLYDKLGLNYLYKAFTTKDIEAAVKGVRALGIRGC AVSMPFKESCIPFLDAIDPSAKVIDSVNTIVNDDGKLTGLNTDYIAVKSLIASHRLDTNA RVMIQGSGGMGKAVIAAFRDAGFRDVIIAARNRQRGLALAKQYGFQWQPLPEGIAAEILV NVTPLGMAGGAESNTLAFSKAMVAQASVVFDVVALPAETPLIRLAQQRGKQTISGAEVIA LQAVEQFALYTGVRPDNALVAEASAFARS >gi|289775105|gb|GG745512.1| GENE 319 354309 - 355940 1963 543 aa, chain - ## HITS:1 COG:yjbB KEGG:ns NR:ns ## COG: yjbB COG1283 # Protein_GI_number: 16131846 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Escherichia coli K12 # 1 543 1 543 543 856 89.0 0 MLTLLHLLSAVALLVWGTHIVRTGVMRVYGARLRTVLSSSVEKKPLAFCAGLGVTALVQS SNATTMLVTSFVAQDLVGLTPALVMVLGADVGTALMARVLTFDLSWLSPLLIFIGVIFFL GRKQTRAGQLGRVGIGLGLILLALELIVQAVNPITQANGVQVIFASLTGDIMLDALIGAV FAIISYSSLAAVLLTATLTAAGAISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVAL GSLLFKLVGSLIILPFVHPLAAAMHKLPLAESELVIYFHVFYNLLRCIAMVPFAGPMAKL CQRMIRDEPELDNQLKPKHLDPSALDTPALALANAARETLRIGDAMEQMLGSLHKVMHGE PRQEKELRRMADDINVLYTAIKLYLARMPKDELAEEESRRWAEIIEMSLNLEQASDIVER MGSEIADKSLAARRAFSVEGLKELDALYDLLLSNLQLAMSVFFSSDVPSARRLRRSKHRF RILNRRYSHAHVDRLHQQNVQSIETSTLHLALLGDMKRLNSLFCSVAYSVMEQPDEDDER DDY >gi|289775105|gb|GG745512.1| GENE 320 356071 - 359754 5045 1227 aa, chain - ## HITS:1 COG:STM4188_2 KEGG:ns NR:ns ## COG: STM4188_2 COG1410 # Protein_GI_number: 16767438 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Salmonella typhimurium LT2 # 327 1227 1 901 901 1759 95.0 0 MSSKVEQLHQQLKERILVLDGGMGTMIQGYRLSEQDFRGERFADWPCDLKGNNDLLVLSK PEVIREIHDAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARASADAWTA RTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTRALVEGGVDLILI ETVFDTLNAKAAIYAVKEELEALGVDLPLMISGTITDASGRTLSGQTTEAFYNSLRHAEA LSFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMATQIREWAE AGFLNIVGGCCGTTPEHIAAMSRAVAGLPPRQLPELPVACRLAGLEPLNIGDDSLFVNVG ERTNVTGSAKFKRLIKEEKYSEALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLNLI AGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIVNSISMKEGVEPFIHHAKLVRRYGAAV VVMAFDEVGQADTRERKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQ DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG QLAIYDDLPGELRDAVEDVILNRRDDSTERLLELAEKYRGSKADDGANAQQAEWRSWDVK KRLEYSLVKGITEFIEQDTEEARQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK SARVMKQAVAYLEPYIEASKEQGSSNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIIDL GVMVPADKILKTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKA HTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPR TPPVTLAAARENDLAFDWESYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKY PRILEDEVVGEEAQRLFKDANDLLDKLSAEKTLNPRGVVGLFPANRIGDDIEIYRDETRT HVLTVSHHLRQQTEKVGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAYEAQH DDYNKIMIKAIADRLAEAFAEYLHEKVRKVYWGYAANENLSNEELIRENYQGIRPAPGYP ACPEHTEKGTIWQLLDVEAHTGMKLTESFAMWPGASVSGWYFSHPDSKYFAVAQIQRDQV EDYALRKGMTPAEVERWLAPNLGYDAD >gi|289775105|gb|GG745512.1| GENE 321 359949 - 360779 1064 276 aa, chain + ## HITS:1 COG:STM4187 KEGG:ns NR:ns ## COG: STM4187 COG1414 # Protein_GI_number: 16767437 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 5 276 4 274 274 481 93.0 1e-136 MATTPVPAKRGRKPAAATAQQAGGQVQSLTRGLKLLEWIAESHSSVALTELAQQAGLPNS TTHRLLTTMQQLGFVRQVGELGHWAVGAHAFVVGSSFLQSRNLLAIVHPILRQLMEDSGE TVNLAVLDQSDHQAIIIDQVQCTQLMRMSAPIGGKLPMHASGAGKAFLSQLSEEQVTSLL HRKGLHAYTHATLVSPLHLKEDLAQTRKRGYSFDDEEHALGLRCVAACIYDEHREPFAAI SISGPISRMTDDRVTELGALVIKAAKEVTLAYGGVK >gi|289775105|gb|GG745512.1| GENE 322 360830 - 362614 1910 594 aa, chain - ## HITS:1 COG:STM4185 KEGG:ns NR:ns ## COG: STM4185 COG4579 # Protein_GI_number: 16767435 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Salmonella typhimurium LT2 # 1 577 1 577 583 1066 88.0 0 MTRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKQRIHLYDHHVGL VVEQLRCITEGKSTDVDFLLRVKQQYTQLLPDYPRFEIAESFFNSVYCRLFDHRSLTPER LFIFSSQPERPFRTLPRPLAKDFFPERGWSHLLGKVLSDLPLRLPWQNKARDIGYIIASL QEALGEELLATCHLQVANELFYRNKAAWLVGKLVMPMATLPFLLPIHRSDEGELFVDTCL TTHAEASIVFGFARSYFMVYAPLPGALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE YLHYITRCDEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEVTAAHVRACYQLV KEHDRVGRMADTQEFENFVLDKRQIAPGLLALLQAEAGNKLTDLGDRIVISHLYIERRMV PLNLWLEQVNGQALRDAVEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRQIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLL RADYWRELQTRIKNGHVEDVYAYRRKQRFSVRYGADSRPDKVFTPPSGRVRRSA >gi|289775105|gb|GG745512.1| GENE 323 362717 - 364021 1700 434 aa, chain - ## HITS:1 COG:STM4184 KEGG:ns NR:ns ## COG: STM4184 COG2224 # Protein_GI_number: 16767434 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 840 95.0 0 MKTRTQQIEELNKEWTNPRWEGITRPYSAEEVVKLRGSVNPECTLAQLGAAKMWRLLHGE AKKGYVNSLGALTGGQALQQAKAGIEAIYLSGWQVAADANLASSMYPDQSLYPANSVPAV VDRINNTFRRADQIQWSVGIEPNDPRYIDYFLPIVADAEAGFGGVLNAFELMKSMIEAGA AAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVMGVPTLVIARTDADAADL ITSDCDPYDREFITGDRTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSKPDLEQARR FAEAIHARFPGKLLAYNCSPSFNWKKNLDDKTIASFQQQLSDMGYKYQFITLAGIHSMWF NMFDLAHAYAQGEGMRHYVEKVQQPEFAAAPEGYSFVSHQQEVGTGYFDKVTTIIQGGAS SVTALTGSTEEDQF >gi|289775105|gb|GG745512.1| GENE 324 364101 - 365702 2020 533 aa, chain - ## HITS:1 COG:STM4183 KEGG:ns NR:ns ## COG: STM4183 COG2225 # Protein_GI_number: 16767433 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Salmonella typhimurium LT2 # 1 533 1 533 533 995 88.0 0 MTQQATITDELAFSQPYGEQEKQILTPEAVEFLTELVSRFAPARNKLLAARQQQQQAIDQ GVLPDFISETASIRNGNWTIRGIPADLQDRRVEITGPVERKMVINAMNANVKVFMADFED SLAPDWRKVIDGQINLRDAVNGTISYTNEAGKIYQLQPNPAVLVCRVRGLHLPEKHVTWR NEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQAWQEAAWWNDVFSFTEDRFDLPR GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNHPDRVLPDRQV VTMDKPFLSAYSRLLIKTCHKRGAFAMGGMAAFIPSKDAERNRQVLSKVTADKELEANNG HDGTWIAHPGLADTAMAVFNRVLGDKPNQLSVTRSADAPITAEQLLAPCEGERTEAGMRA NIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLNDGTPVTKALFR QWLAEELMVIQEELGEHRFSHGRFDDAARLMEQITTSDELIDFLTLPGYRLLA >gi|289775105|gb|GG745512.1| GENE 325 365963 - 366892 1040 309 aa, chain - ## HITS:1 COG:STM4182 KEGG:ns NR:ns ## COG: STM4182 COG1897 # Protein_GI_number: 16767432 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 605 94.0 1e-173 MPIRVQDELPAVSFLRNENVFVMTTTRATTQEIRPLKVLILNLMPKKIETENQFLRLLSN SPLQVDIQLLRIDARESRNTPAEHLNNFYCNFDEICDQNFDGLIVTGAPLGLVEFNDVAY WPQIKQVLEWAKDHVTSTLFVCWAVQAALNILYGIPKQTRAEKISGVYEHHILHPHALLT RGFDDSFLAPHSRYADFPAGLIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDA NTLASEYFRDVEAGLNPEVPYNYFPQNDPQNKPRATWRSHGNLLFANWLNYYVYQITPYD LRHMNPTLE >gi|289775105|gb|GG745512.1| GENE 326 367049 - 367504 289 151 aa, chain + ## HITS:1 COG:yjaB KEGG:ns NR:ns ## COG: yjaB COG0454 # Protein_GI_number: 16131838 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 144 1 144 147 252 77.0 2e-67 MVISIRRSRPDEGDKLIAIWCRSVDATHDFLSKAYRKELEEMVRAFLPEAPLWVAANTQD QPIAFMLLTGEHMDALFVDPDVRGCGVGKLLIEHALSLTPKLTTNVNEQNEQAVGFYQRM GFNVTGRSETDDLGQPYPLLNLIHEQQAEAD Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:04:51 2011 Seq name: gi|289774778|gb|GG745513.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.6, whole genome shotgun sequence Length of sequence - 365343 bp Number of predicted genes - 332, with homology - 331 Number of transcription units - 171, operones - 75 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 69 - 686 694 ## COG0241 Histidinol phosphatase and related phosphatases - Prom 803 - 862 3.6 + Prom 619 - 678 3.1 2 2 Op 1 32/0.000 + CDS 824 - 1855 1310 ## COG1135 ABC-type metal ion transport system, ATPase component 3 2 Op 2 22/0.000 + CDS 1848 - 2501 977 ## COG2011 ABC-type metal ion transport system, permease component 4 2 Op 3 . + CDS 2545 - 3360 1264 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 3384 - 3421 6.5 + Prom 3382 - 3441 3.9 5 3 Op 1 . + CDS 3468 - 3875 297 ## Kvar_4171 outer membrane lipoprotein 6 3 Op 2 6/0.141 + CDS 3872 - 4579 756 ## COG1720 Uncharacterized conserved protein + Term 4646 - 4672 -1.0 + Prom 4581 - 4640 3.3 7 4 Op 1 . + CDS 4693 - 6411 2470 ## COG0442 Prolyl-tRNA synthetase + Term 6425 - 6460 4.1 8 4 Op 2 . + CDS 6471 - 7313 629 ## KPK_4527 hypothetical protein 9 5 Op 1 4/0.394 - CDS 7444 - 8139 562 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance 10 5 Op 2 5/0.254 - CDS 8182 - 8595 251 ## COG1186 Protein chain release factor B 11 5 Op 3 . - CDS 8592 - 9137 658 ## COG4681 Uncharacterized protein conserved in bacteria - Prom 9162 - 9221 3.8 + Prom 9202 - 9261 2.9 12 6 Op 1 . + CDS 9334 - 9534 114 ## KPN_00203 hypothetical protein 13 6 Op 2 . + CDS 9527 - 9781 310 ## COG4568 Transcriptional antiterminator + Term 9789 - 9816 -0.9 14 7 Tu 1 2/0.507 - CDS 9794 - 11095 1019 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Term 11105 - 11147 3.1 15 8 Op 1 1/0.648 - CDS 11161 - 11550 636 ## COG0346 Lactoylglutathione lyase and related lyases 16 8 Op 2 3/0.465 - CDS 11597 - 13783 3007 ## COG1982 Arginine/lysine/ornithine decarboxylases 17 8 Op 3 7/0.085 - CDS 13864 - 14823 1400 ## COG0825 Acetyl-CoA carboxylase alpha subunit 18 8 Op 4 6/0.141 - CDS 14836 - 18318 4645 ## COG0587 DNA polymerase III, alpha subunit 19 8 Op 5 11/0.014 - CDS 18336 - 18935 741 ## COG0164 Ribonuclease HII 20 8 Op 6 11/0.014 - CDS 18932 - 20083 1263 ## COG0763 Lipid A disaccharide synthetase 21 8 Op 7 25/0.000 - CDS 20083 - 20871 746 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 22 8 Op 8 18/0.000 - CDS 20875 - 21330 443 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases - Prom 21357 - 21416 2.8 - Term 21361 - 21409 4.4 23 8 Op 9 15/0.014 - CDS 21436 - 22338 971 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 24 9 Op 1 17/0.000 - CDS 22465 - 22950 437 ## COG2825 Outer membrane protein 25 9 Op 2 18/0.000 - CDS 23072 - 25501 3130 ## COG4775 Outer membrane protein/protective antigen OMA87 26 9 Op 3 12/0.014 - CDS 25533 - 26885 1080 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 27 9 Op 4 32/0.000 - CDS 26897 - 27679 812 ## COG0575 CDP-diglyceride synthetase 28 9 Op 5 7/0.085 - CDS 27767 - 28543 462 ## COG0020 Undecaprenyl pyrophosphate synthase - Term 28649 - 28678 0.4 29 10 Tu 1 8/0.056 - CDS 28763 - 29965 1127 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Prom 30112 - 30171 2.4 - Term 29994 - 30032 -1.0 30 11 Tu 1 33/0.000 - CDS 30193 - 30750 681 ## COG0233 Ribosome recycling factor - Prom 30808 - 30867 5.1 - Term 30828 - 30882 11.2 31 12 Op 1 24/0.000 - CDS 30901 - 31626 973 ## COG0528 Uridylate kinase - Prom 31695 - 31754 5.1 - Term 31731 - 31764 5.2 32 12 Op 2 38/0.000 - CDS 31774 - 32625 996 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 32666 - 32725 3.1 - Term 32677 - 32708 1.1 33 12 Op 3 . - CDS 32745 - 33470 1234 ## PROTEIN SUPPORTED gi|206581012|ref|YP_002240343.1| ribosomal protein S2 - Prom 33512 - 33571 2.1 34 13 Op 1 9/0.028 + CDS 33794 - 34588 990 ## COG0024 Methionine aminopeptidase + Term 34590 - 34627 7.1 35 13 Op 2 5/0.254 + CDS 34646 - 37309 3302 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 36 13 Op 3 . + CDS 37340 - 38164 1012 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 38177 - 38205 1.0 + Prom 38168 - 38227 8.1 37 14 Tu 1 . + CDS 38272 - 38658 549 ## Kvar_4203 structural protein + Term 38731 - 38769 5.4 - Term 38601 - 38635 -0.5 38 15 Tu 1 . - CDS 38775 - 39932 1613 ## COG3835 Sugar diacid utilization regulator - Prom 39952 - 40011 1.8 - Term 40041 - 40080 7.1 39 16 Tu 1 . - CDS 40101 - 41534 1690 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 41585 - 41644 4.1 40 17 Tu 1 . - CDS 41669 - 43183 1382 ## COG0232 dGTP triphosphohydrolase - Prom 43216 - 43275 3.8 + Prom 43157 - 43216 3.7 41 18 Op 1 5/0.254 + CDS 43267 - 43965 857 ## COG0775 Nucleoside phosphorylase 42 18 Op 2 6/0.141 + CDS 43958 - 44758 875 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 43 18 Op 3 . + CDS 44795 - 45418 762 ## COG2860 Predicted membrane protein + Term 45430 - 45461 3.4 - Term 45411 - 45457 9.1 44 19 Op 1 3/0.465 - CDS 45504 - 45848 556 ## COG0316 Uncharacterized conserved protein 45 19 Op 2 . - CDS 45930 - 47348 1888 ## COG0038 Chloride channel protein EriC - Prom 47382 - 47441 6.3 + Prom 47438 - 47497 6.8 46 20 Tu 1 . + CDS 47529 - 48809 1769 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Term 48957 - 49000 3.1 47 21 Op 1 33/0.000 - CDS 49033 - 51015 2531 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 48 21 Op 2 14/0.014 - CDS 51012 - 51905 1020 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 49 21 Op 3 7/0.085 - CDS 51905 - 52702 183 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 50 21 Op 4 5/0.254 - CDS 52748 - 54955 2833 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 55010 - 55069 6.5 - Term 55131 - 55172 9.0 51 22 Tu 1 . - CDS 55190 - 57760 3506 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Prom 58234 - 58293 5.9 52 23 Tu 1 . + CDS 58348 - 58722 74 ## KPK_4571 pullulanase secretion protein PulS + Term 58733 - 58772 -0.2 - Term 58720 - 58758 -0.4 53 24 Tu 1 . - CDS 58762 - 59319 400 ## Kvar_4219 general secretion pathway protein B - Prom 59435 - 59494 2.5 - Term 59499 - 59545 -0.9 54 25 Tu 1 . - CDS 59576 - 62884 3979 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 62904 - 62963 6.3 + Prom 63101 - 63160 5.1 55 26 Op 1 . + CDS 63191 - 64033 396 ## COG3031 Type II secretory pathway, component PulC 56 26 Op 2 6/0.141 + CDS 64061 - 66016 2359 ## COG1450 Type II secretory pathway, component PulD 57 26 Op 3 . + CDS 66013 - 67506 2023 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 58 26 Op 4 . + CDS 67508 - 67612 89 ## + Prom 67914 - 67973 22.6 59 27 Op 1 10/0.014 + CDS 68075 - 68983 1201 ## COG1459 Type II secretory pathway, component PulF 60 27 Op 2 12/0.014 + CDS 69004 - 69426 752 ## COG2165 Type II secretory pathway, pseudopilin PulG 61 27 Op 3 12/0.014 + CDS 69426 - 69941 426 ## COG2165 Type II secretory pathway, pseudopilin PulG 62 27 Op 4 12/0.014 + CDS 69938 - 70303 438 ## COG2165 Type II secretory pathway, pseudopilin PulG 63 27 Op 5 7/0.085 + CDS 70312 - 70896 719 ## COG4795 Type II secretory pathway, component PulJ 64 27 Op 6 4/0.394 + CDS 70893 - 71873 912 ## COG3156 Type II secretory pathway, component PulK 65 27 Op 7 2/0.507 + CDS 71896 - 73062 1019 ## COG3297 Type II secretory pathway, component PulL 66 27 Op 8 . + CDS 73055 - 73540 536 ## COG3149 Type II secretory pathway, component PulM 67 27 Op 9 . + CDS 73530 - 74276 800 ## Kvar_4232 type II secretion system protein N 68 27 Op 10 . + CDS 74273 - 75073 1202 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases + Term 75077 - 75140 5.1 69 28 Tu 1 . - CDS 75120 - 76004 1311 ## COG1643 HrpA-like helicases - Prom 76136 - 76195 80.3 70 29 Tu 1 . - CDS 76797 - 77966 1227 ## COG1643 HrpA-like helicases - Prom 77994 - 78053 3.5 + Prom 77958 - 78017 4.3 71 30 Op 1 3/0.465 + CDS 78039 - 78575 565 ## COG1514 2'-5' RNA ligase 72 30 Op 2 6/0.141 + CDS 78575 - 79291 466 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Term 79344 - 79379 -0.1 73 31 Op 1 3/0.465 + CDS 79454 - 79909 687 ## COG1734 DnaK suppressor protein + Term 79931 - 79963 5.4 74 31 Op 2 1/0.648 + CDS 79969 - 80850 998 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 75 31 Op 3 7/0.085 + CDS 80946 - 82307 1782 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 76 31 Op 4 4/0.394 + CDS 82301 - 82783 184 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 + Prom 82815 - 82874 5.3 77 32 Op 1 19/0.000 + CDS 82903 - 83694 986 ## COG0413 Ketopantoate hydroxymethyltransferase 78 32 Op 2 12/0.014 + CDS 83706 - 84560 1177 ## COG0414 Panthothenate synthetase + Term 84575 - 84607 3.1 79 33 Tu 1 . + CDS 84654 - 85034 503 ## COG0853 Aspartate 1-decarboxylase 80 34 Tu 1 4/0.394 - CDS 85070 - 86224 1153 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 86306 - 86365 2.4 - Term 86351 - 86381 0.3 81 35 Tu 1 3/0.465 - CDS 86382 - 86822 488 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 86882 - 86935 10.2 82 36 Op 1 45/0.000 - CDS 86945 - 87715 1360 ## COG0842 ABC-type multidrug transport system, permease component 83 36 Op 2 . - CDS 87712 - 88638 960 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Prom 88700 - 88759 2.3 84 37 Tu 1 . + CDS 88823 - 89485 720 ## COG0288 Carbonic anhydrase + Term 89499 - 89548 11.0 85 38 Tu 1 . - CDS 89543 - 90079 906 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 90229 - 90288 6.8 + Prom 90188 - 90247 5.4 86 39 Tu 1 . + CDS 90283 - 92673 3189 ## COG4993 Glucose dehydrogenase + Term 92677 - 92717 4.9 - Term 92671 - 92700 2.1 87 40 Tu 1 . - CDS 92756 - 94366 1671 ## COG2132 Putative multicopper oxidases - Prom 94394 - 94453 3.8 + Prom 94334 - 94393 5.1 88 41 Tu 1 . + CDS 94534 - 94860 539 ## Kvar_4252 hypothetical protein + Term 94866 - 94902 6.0 + Prom 95026 - 95085 7.8 89 42 Op 1 . + CDS 95114 - 95524 296 ## Kvar_4253 hypothetical protein 90 42 Op 2 . + CDS 95521 - 97467 1377 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 97474 - 97513 6.2 + Prom 97509 - 97568 4.1 91 43 Op 1 9/0.028 + CDS 97614 - 98474 1074 ## COG0421 Spermidine synthase 92 43 Op 2 . + CDS 98499 - 99293 1047 ## COG1586 S-adenosylmethionine decarboxylase + Term 99355 - 99396 2.1 - Term 99292 - 99330 1.1 93 44 Tu 1 . - CDS 99451 - 99813 512 ## COG3112 Uncharacterized protein conserved in bacteria - Prom 99888 - 99947 3.9 - Term 99913 - 99954 7.0 94 45 Tu 1 . - CDS 100001 - 102598 3605 ## COG1049 Aconitase B - Prom 102768 - 102827 6.3 + Prom 102912 - 102971 5.0 95 46 Op 1 . + CDS 103030 - 104637 1008 ## Kvar_4259 hypothetical protein 96 46 Op 2 . + CDS 104649 - 105455 668 ## KPK_4617 hypothetical protein + Term 105461 - 105500 9.0 - Term 105445 - 105492 14.1 97 47 Op 1 . - CDS 105500 - 105784 85 ## Kvar_4261 lipoprotein - Prom 105846 - 105905 2.4 - Term 105894 - 105922 3.0 98 47 Op 2 30/0.000 - CDS 105949 - 107373 684 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 107449 - 107508 7.8 - Term 107542 - 107571 3.5 99 48 Op 1 13/0.014 - CDS 107580 - 109478 1349 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 100 48 Op 2 6/0.141 - CDS 109493 - 112156 3190 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component 101 49 Tu 1 . - CDS 112294 - 113073 740 ## COG2186 Transcriptional regulators 102 50 Tu 1 . + CDS 113718 - 115088 2027 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 115112 - 115160 8.3 + Prom 115135 - 115194 3.4 103 51 Op 1 1/0.648 + CDS 115273 - 116679 556 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 104 51 Op 2 . + CDS 116679 - 117629 944 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase + Term 117825 - 117854 0.7 - Term 117632 - 117658 -0.3 105 52 Op 1 6/0.141 - CDS 117746 - 118600 1143 ## COG3725 Membrane protein required for beta-lactamase induction 106 52 Op 2 . - CDS 118597 - 119160 441 ## COG3023 Negative regulator of beta-lactamase expression - Prom 119238 - 119297 3.1 107 53 Tu 1 . + CDS 119294 - 120187 438 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 108 54 Op 1 8/0.056 + CDS 120369 - 120800 671 ## COG4969 Tfp pilus assembly protein, major pilin PilA 109 54 Op 2 24/0.000 + CDS 120811 - 122196 1463 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 110 54 Op 3 . + CDS 122186 - 123391 1036 ## COG1459 Type II secretory pathway, component PulF 111 55 Tu 1 . - CDS 123428 - 124471 1289 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 124642 - 124701 3.6 + Prom 124534 - 124593 4.6 112 56 Op 1 7/0.085 + CDS 124815 - 125435 545 ## COG0237 Dephospho-CoA kinase 113 56 Op 2 7/0.085 + CDS 125435 - 126178 1012 ## COG4582 Uncharacterized protein conserved in bacteria 114 56 Op 3 . + CDS 126188 - 126382 241 ## COG3024 Uncharacterized protein conserved in bacteria + Term 126393 - 126432 10.0 115 57 Tu 1 8/0.056 - CDS 126435 - 126827 345 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 126835 - 126865 3.0 116 58 Op 1 . - CDS 126885 - 129590 3815 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Term 129593 - 129621 0.5 117 58 Op 2 . - CDS 129653 - 130081 329 ## KPK_4640 SecA regulator SecM - Prom 130264 - 130323 4.2 - Term 130400 - 130453 6.0 118 59 Tu 1 . - CDS 130474 - 131391 830 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 119 60 Op 1 35/0.000 - CDS 131492 - 132643 1414 ## COG0206 Cell division GTPase 120 60 Op 2 25/0.000 - CDS 132706 - 133968 1257 ## COG0849 Actin-like ATPase involved in cell division 121 60 Op 3 18/0.000 - CDS 133965 - 134795 611 ## COG1589 Cell division septal protein 122 60 Op 4 11/0.014 - CDS 134797 - 135717 980 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 123 60 Op 5 26/0.000 - CDS 135710 - 137185 1722 ## COG0773 UDP-N-acetylmuramate-alanine ligase 124 60 Op 6 31/0.000 - CDS 137234 - 138304 1018 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 125 60 Op 7 25/0.000 - CDS 138301 - 139575 1694 ## COG0772 Bacterial cell division membrane protein 126 60 Op 8 28/0.000 - CDS 139575 - 140891 1427 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 127 60 Op 9 28/0.000 - CDS 140894 - 141976 1674 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 128 60 Op 10 26/0.000 - CDS 141970 - 143328 1535 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 129 60 Op 11 26/0.000 - CDS 143325 - 144812 1795 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 130 60 Op 12 12/0.014 - CDS 144799 - 146565 1644 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 131 60 Op 13 12/0.014 - CDS 146581 - 146946 331 ## COG3116 Cell division protein 132 60 Op 14 29/0.000 - CDS 146943 - 147881 856 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 133 60 Op 15 4/0.394 - CDS 147887 - 148345 187 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 148390 - 148449 3.9 134 61 Tu 1 . - CDS 148986 - 149990 1032 ## COG1609 Transcriptional regulators - Prom 150049 - 150108 5.0 - Term 150114 - 150146 5.4 135 62 Op 1 32/0.000 - CDS 150171 - 150662 541 ## COG0440 Acetolactate synthase, small (regulatory) subunit 136 62 Op 2 2/0.507 - CDS 150665 - 152389 2136 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 152730 - 152768 3.5 137 63 Tu 1 . - CDS 152784 - 153752 901 ## COG0583 Transcriptional regulator - Prom 153972 - 154031 8.0 + Prom 154454 - 154513 2.4 138 64 Op 1 11/0.014 + CDS 154547 - 156118 1907 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 139 64 Op 2 10/0.014 + CDS 156118 - 157209 1453 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 140 64 Op 3 30/0.000 + CDS 157212 - 158612 1782 ## COG0065 3-isopropylmalate dehydratase large subunit 141 64 Op 4 . + CDS 158623 - 159228 923 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 159236 - 159268 5.0 + Prom 159395 - 159454 5.8 142 65 Op 1 1/0.648 + CDS 159626 - 161659 1895 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 143 65 Op 2 4/0.394 + CDS 161671 - 162534 1166 ## COG0169 Shikimate 5-dehydrogenase 144 65 Op 3 . + CDS 162545 - 163759 1695 ## COG0477 Permeases of the major facilitator superfamily 145 65 Op 4 . + CDS 163790 - 164545 846 ## COG0710 3-dehydroquinate dehydratase 146 66 Tu 1 . - CDS 164583 - 165479 928 ## COG0583 Transcriptional regulator - Prom 165679 - 165738 3.4 + Prom 165445 - 165504 6.9 147 67 Tu 1 . + CDS 165711 - 167021 958 ## COG0477 Permeases of the major facilitator superfamily + Term 167022 - 167074 3.4 148 68 Tu 1 . - CDS 167066 - 168250 1547 ## COG0477 Permeases of the major facilitator superfamily - Prom 168308 - 168367 1.7 - Term 168465 - 168504 1.0 149 69 Tu 1 . - CDS 168522 - 168671 128 ## Kvar_4314 hypothetical protein - Prom 168695 - 168754 1.7 + Prom 168665 - 168724 2.9 150 70 Tu 1 . + CDS 168762 - 170417 1990 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 170644 - 170700 4.1 151 71 Op 1 14/0.014 + CDS 170710 - 171690 1367 ## COG4143 ABC-type thiamine transport system, periplasmic component 152 71 Op 2 11/0.014 + CDS 171666 - 173276 2030 ## COG1178 ABC-type Fe3+ transport system, permease component 153 71 Op 3 . + CDS 173260 - 173961 286 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 174089 - 174116 -0.8 154 72 Tu 1 . - CDS 173948 - 174715 1009 ## COG0586 Uncharacterized membrane-associated protein - Prom 174738 - 174797 2.6 - Term 174723 - 174761 1.5 155 73 Tu 1 . - CDS 174844 - 175689 973 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 175826 - 175885 3.8 + Prom 175884 - 175943 2.9 156 74 Op 1 7/0.085 + CDS 176026 - 177735 1838 ## COG1069 Ribulose kinase 157 74 Op 2 5/0.254 + CDS 177746 - 179248 1949 ## COG2160 L-arabinose isomerase + Term 179302 - 179330 2.1 158 75 Tu 1 3/0.465 + CDS 179387 - 180082 958 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 180144 - 180178 1.0 + Prom 180103 - 180162 5.3 159 76 Tu 1 . + CDS 180187 - 182544 2734 ## COG0417 DNA polymerase elongation subunit (family B) + Prom 182577 - 182636 2.6 160 77 Op 1 7/0.085 + CDS 182731 - 185637 4190 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 161 77 Op 2 . + CDS 185650 - 186309 225 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 162 78 Tu 1 . - CDS 186352 - 186891 765 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) - Prom 186964 - 187023 1.5 - Term 186993 - 187027 4.5 163 79 Tu 1 . - CDS 187071 - 188435 1986 ## COG3493 Na+/citrate symporter - Prom 188585 - 188644 5.8 + Prom 188568 - 188627 4.1 164 80 Op 1 9/0.028 + CDS 188759 - 190384 2026 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 165 80 Op 2 . + CDS 190374 - 191072 237 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 - Term 191063 - 191095 4.2 166 81 Tu 1 . - CDS 191105 - 191932 996 ## COG1076 DnaJ-domain-containing proteins 1 - Prom 192145 - 192204 3.6 + Prom 191911 - 191970 2.1 167 82 Op 1 16/0.000 + CDS 192176 - 194524 2718 ## COG1452 Organic solvent tolerance protein OstA 168 82 Op 2 13/0.014 + CDS 194579 - 195865 1355 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 169 82 Op 3 12/0.014 + CDS 195871 - 196860 496 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 170 82 Op 4 8/0.056 + CDS 196857 - 197678 1023 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 171 82 Op 5 8/0.056 + CDS 197681 - 198058 432 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 172 82 Op 6 . + CDS 198063 - 198911 1049 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 199007 - 199052 5.7 - Term 199135 - 199186 15.2 173 83 Tu 1 . - CDS 199204 - 199683 756 ## COG0262 Dihydrofolate reductase - Prom 199709 - 199768 3.4 - Term 199762 - 199822 6.5 174 84 Op 1 7/0.085 - CDS 199858 - 201723 1021 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 175 84 Op 2 4/0.394 - CDS 201716 - 202249 496 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 202280 - 202339 4.5 - Term 202277 - 202315 -0.8 176 85 Op 1 3/0.465 - CDS 202345 - 203649 1471 ## COG0477 Permeases of the major facilitator superfamily 177 85 Op 2 4/0.394 - CDS 203720 - 204670 1079 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 204767 - 204826 4.4 178 86 Tu 1 . - CDS 204881 - 205873 1315 ## COG1609 Transcriptional regulators - Prom 205902 - 205961 4.6 + Prom 205949 - 206008 3.6 179 87 Op 1 3/0.465 + CDS 206110 - 206874 783 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 180 87 Op 2 1/0.648 + CDS 206890 - 207420 472 ## COG3265 Gluconate kinase 181 87 Op 3 . + CDS 207417 - 207884 552 ## COG2731 Beta-galactosidase, beta subunit + Term 208047 - 208090 3.2 - Term 207854 - 207892 4.4 182 88 Tu 1 . - CDS 207932 - 208165 292 ## Kvar_4347 hypothetical protein - Prom 208236 - 208295 1.5 - Term 208268 - 208301 6.1 183 89 Op 1 24/0.000 - CDS 208334 - 211558 4619 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 184 89 Op 2 8/0.056 - CDS 211576 - 212619 1377 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 212730 - 212789 4.4 - Term 213089 - 213136 3.0 185 90 Tu 1 . - CDS 213182 - 214003 984 ## COG0289 Dihydrodipicolinate reductase - Prom 214035 - 214094 2.6 - Term 214024 - 214079 10.6 186 91 Tu 1 . - CDS 214298 - 214927 537 ## COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain - Prom 214957 - 215016 1.7 + Prom 214907 - 214966 1.8 187 92 Tu 1 . + CDS 215020 - 215949 824 ## COG0583 Transcriptional regulator 188 93 Op 1 . - CDS 215897 - 216262 331 ## COG3152 Predicted membrane protein 189 93 Op 2 3/0.465 - CDS 216293 - 217207 1177 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Term 217213 - 217249 5.1 190 94 Op 1 7/0.085 - CDS 217275 - 218225 427 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 191 94 Op 2 7/0.085 - CDS 218227 - 218676 264 ## PROTEIN SUPPORTED gi|225086978|ref|YP_002658248.1| ribosomal protein S2 - Prom 218715 - 218774 3.8 192 95 Op 1 16/0.000 - CDS 218794 - 219294 639 ## COG0597 Lipoprotein signal peptidase 193 95 Op 2 16/0.000 - CDS 219294 - 222062 3475 ## COG0060 Isoleucyl-tRNA synthetase 194 95 Op 3 . - CDS 222154 - 223092 403 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 - Prom 223115 - 223174 6.2 195 96 Tu 1 . + CDS 223009 - 223302 72 ## gi|330009360|ref|ZP_08306517.1| hypothetical protein HMPREF9538_04211 + Term 223307 - 223340 0.4 + Prom 223322 - 223381 3.6 196 97 Tu 1 . + CDS 223422 - 223685 422 ## PROTEIN SUPPORTED gi|206580471|ref|YP_002240528.1| ribosomal protein S20 + Term 223712 - 223745 3.8 - Term 223704 - 223729 -0.5 197 98 Op 1 5/0.254 - CDS 223805 - 224701 1198 ## COG0583 Transcriptional regulator 198 98 Op 2 1/0.648 - CDS 224756 - 225931 1524 ## COG3004 Na+/H+ antiporter - Prom 225964 - 226023 4.0 - Term 226052 - 226085 5.1 199 99 Op 1 31/0.000 - CDS 226107 - 227240 1366 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 200 99 Op 2 . - CDS 227328 - 229244 2262 ## COG0443 Molecular chaperone - Prom 229284 - 229343 1.6 + Prom 229478 - 229537 5.8 201 100 Op 1 . + CDS 229630 - 230034 448 ## Kvar_4381 hypothetical protein 202 100 Op 2 4/0.394 + CDS 230062 - 230811 653 ## COG4735 Uncharacterized protein conserved in bacteria + Prom 230815 - 230874 2.0 203 100 Op 3 . + CDS 230900 - 231466 841 ## COG1584 Predicted membrane protein 204 101 Tu 1 . - CDS 231523 - 232827 1782 ## COG0477 Permeases of the major facilitator superfamily - Prom 232877 - 232936 3.9 205 102 Op 1 5/0.254 - CDS 232947 - 233534 683 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Prom 233561 - 233620 3.9 - Term 233559 - 233601 1.1 206 102 Op 2 . - CDS 233634 - 234587 1359 ## COG0176 Transaldolase - Prom 234631 - 234690 2.1 + Prom 234549 - 234608 2.2 207 103 Op 1 5/0.254 + CDS 234790 - 236220 763 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 208 103 Op 2 . + CDS 236298 - 237071 1120 ## COG3022 Uncharacterized protein conserved in bacteria + Term 237092 - 237119 -0.8 - Term 237075 - 237112 2.3 209 104 Tu 1 . - CDS 237141 - 237518 256 ## KPK_4751 putative lipoprotein - Prom 237598 - 237657 9.0 - Term 237766 - 237796 3.4 210 105 Op 1 19/0.000 - CDS 237832 - 239112 1972 ## COG0498 Threonine synthase 211 105 Op 2 11/0.014 - CDS 239116 - 240045 1004 ## COG0083 Homoserine kinase 212 105 Op 3 . - CDS 240047 - 242509 2927 ## COG0527 Aspartokinases 213 106 Tu 1 . - CDS 242871 - 243557 536 ## COG0565 rRNA methylase - Prom 243792 - 243851 6.0 214 107 Tu 1 . + CDS 244190 - 244906 943 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 244933 - 244972 9.1 - Term 244926 - 244955 3.5 215 108 Op 1 6/0.141 - CDS 244969 - 246321 1584 ## COG4452 Inner membrane protein involved in colicin E2 resistance 216 108 Op 2 40/0.000 - CDS 246382 - 247806 1350 ## COG0642 Signal transduction histidine kinase 217 108 Op 3 4/0.394 - CDS 247806 - 248495 694 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 218 108 Op 4 . - CDS 248508 - 248981 801 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 249007 - 249066 4.7 + Prom 249091 - 249150 4.5 219 109 Tu 1 . + CDS 249191 - 250060 949 ## COG2207 AraC-type DNA-binding domain-containing proteins 220 110 Tu 1 . - CDS 250057 - 250704 740 ## COG0406 Fructose-2,6-bisphosphatase + Prom 250730 - 250789 2.7 221 111 Tu 1 . + CDS 250818 - 251333 211 ## COG1986 Uncharacterized conserved protein + Term 251439 - 251481 3.0 - Term 251082 - 251122 -0.7 222 112 Tu 1 4/0.394 - CDS 251320 - 251649 430 ## COG2973 Trp operon repressor - Prom 251669 - 251728 1.8 223 113 Tu 1 . - CDS 251738 - 253675 2355 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Prom 253728 - 253787 2.3 224 114 Tu 1 . + CDS 253904 - 255571 2464 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 255574 - 255617 5.7 - Term 255728 - 255768 4.2 225 115 Op 1 1/0.648 - CDS 255829 - 257061 1849 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism 226 115 Op 2 5/0.254 - CDS 257083 - 258465 1623 ## COG1066 Predicted ATP-dependent serine protease 227 115 Op 3 . - CDS 258475 - 259446 1358 ## COG0560 Phosphoserine phosphatase - Prom 259484 - 259543 2.9 + Prom 259472 - 259531 1.8 228 116 Op 1 2/0.507 + CDS 259551 - 260198 852 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression 229 116 Op 2 . + CDS 260198 - 261214 1332 ## COG0095 Lipoate-protein ligase A - Term 261239 - 261288 1.1 230 117 Tu 1 . - CDS 261295 - 262014 965 ## COG0813 Purine-nucleoside phosphorylase 231 118 Op 1 4/0.394 - CDS 262117 - 263340 1797 ## COG1015 Phosphopentomutase 232 118 Op 2 7/0.085 - CDS 263393 - 264715 1606 ## COG0213 Thymidine phosphorylase - Prom 264739 - 264798 2.6 - Term 264729 - 264771 2.3 233 119 Tu 1 . - CDS 264829 - 265608 1017 ## COG0274 Deoxyribose-phosphate aldolase - Term 265811 - 265865 0.6 234 120 Op 1 4/0.394 - CDS 266025 - 266810 931 ## COG0084 Mg-dependent DNase 235 120 Op 2 . - CDS 266807 - 267880 1044 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Term 267939 - 267969 4.3 236 121 Tu 1 . - CDS 268034 - 268195 141 ## gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 237 122 Tu 1 . - CDS 268325 - 268945 782 ## COG2823 Predicted periplasmic or secreted lipoprotein - Term 269121 - 269156 4.1 238 123 Op 1 3/0.465 - CDS 269165 - 270754 2338 ## COG4108 Peptide chain release factor RF-3 - Term 270761 - 270791 1.0 239 123 Op 2 4/0.394 - CDS 270845 - 271522 732 ## COG1011 Predicted hydrolase (HAD superfamily) 240 123 Op 3 8/0.056 - CDS 271537 - 271983 645 ## PROTEIN SUPPORTED gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase 241 123 Op 4 . - CDS 271952 - 272365 413 ## COG3050 DNA polymerase III, psi subunit - Prom 272388 - 272447 3.1 + Prom 272386 - 272445 3.5 242 124 Tu 1 . + CDS 272468 - 273496 250 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative + Term 273509 - 273551 8.0 + TRNA 273668 - 273754 69.1 # Leu CAG 0 0 + TRNA 273783 - 273869 69.1 # Leu CAG 0 0 + TRNA 273901 - 273987 69.1 # Leu CAG 0 0 - Term 273886 - 273959 26.2 243 125 Tu 1 . - CDS 274009 - 274248 190 ## Kvar_4424 hypothetical protein - Prom 274391 - 274450 8.1 + Prom 274400 - 274459 4.4 244 126 Tu 1 . + CDS 274513 - 275559 1062 ## COG2199 FOG: GGDEF domain + Prom 275579 - 275638 4.9 245 127 Tu 1 . + CDS 275671 - 276459 729 ## COG4114 Uncharacterized Fe-S protein + Term 276478 - 276515 8.5 - Term 276469 - 276500 5.5 246 128 Tu 1 . - CDS 276508 - 277851 1427 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Prom 277948 - 278007 4.9 247 129 Tu 1 . + CDS 278185 - 278643 486 ## COG2606 Uncharacterized conserved protein 248 130 Op 1 . - CDS 278649 - 279323 170 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 249 130 Op 2 2/0.507 - CDS 279284 - 279955 282 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 280183 - 280242 6.8 - Term 280181 - 280216 3.5 250 131 Op 1 . - CDS 280271 - 281152 602 ## COG2207 AraC-type DNA-binding domain-containing proteins 251 131 Op 2 . - CDS 281169 - 282353 1305 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 282393 - 282452 4.7 + Prom 282342 - 282401 7.1 252 132 Op 1 12/0.014 + CDS 282635 - 283411 673 ## COG2966 Uncharacterized conserved protein 253 132 Op 2 . + CDS 283402 - 283875 482 ## COG3610 Uncharacterized conserved protein 254 133 Op 1 . + CDS 283978 - 284517 496 ## COG5529 Pyocin large subunit 255 133 Op 2 . + CDS 284514 - 285257 854 ## COG1484 DNA replication protein 256 133 Op 3 . + CDS 285323 - 285817 614 ## KP1_0769 putative outer membrane protein + Prom 285936 - 285995 3.5 257 134 Tu 1 . + CDS 286075 - 288366 2864 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Term 288357 - 288404 5.2 258 135 Tu 1 . - CDS 288427 - 289365 634 ## COG5464 Uncharacterized conserved protein - Term 289449 - 289490 12.8 259 136 Op 1 3/0.465 - CDS 289499 - 290509 935 ## COG2222 Predicted phosphosugar isomerases 260 136 Op 2 3/0.465 - CDS 290527 - 291588 1363 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 261 136 Op 3 13/0.014 - CDS 291601 - 292452 1243 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 262 136 Op 4 13/0.014 - CDS 292430 - 293209 1022 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 263 136 Op 5 9/0.028 - CDS 293226 - 293696 343 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 264 136 Op 6 3/0.465 - CDS 293711 - 294133 354 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 265 136 Op 7 . - CDS 294233 - 296998 2812 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Term 297083 - 297119 4.1 266 137 Op 1 2/0.507 - CDS 297133 - 298578 1533 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 267 137 Op 2 . - CDS 298590 - 299612 728 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 299646 - 299705 5.2 + Prom 299563 - 299622 4.1 268 138 Tu 1 . + CDS 299750 - 300664 792 ## COG1802 Transcriptional regulators + Term 300783 - 300811 -0.9 269 139 Tu 1 . + CDS 300844 - 302205 1501 ## COG0477 Permeases of the major facilitator superfamily + Term 302214 - 302245 2.8 - Term 301995 - 302019 -1.0 270 140 Tu 1 . - CDS 302209 - 303045 750 ## COG0456 Acetyltransferases - Prom 303252 - 303311 2.0 271 141 Tu 1 . + CDS 303078 - 303611 534 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 303543 - 303583 7.4 272 142 Op 1 . - CDS 303640 - 304650 1091 ## COG2055 Malate/L-lactate dehydrogenases 273 142 Op 2 4/0.394 - CDS 304662 - 306263 2197 ## COG0531 Amino acid transporters 274 142 Op 3 5/0.254 - CDS 306279 - 307883 1824 ## COG1012 NAD-dependent aldehyde dehydrogenases 275 142 Op 4 . - CDS 307898 - 308818 1353 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 276 143 Tu 1 . - CDS 308970 - 309794 979 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 309980 - 310039 2.2 277 144 Op 1 4/0.394 + CDS 310105 - 311052 825 ## COG3938 Proline racemase 278 144 Op 2 . + CDS 311049 - 312158 1077 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 279 144 Op 3 . + CDS 312155 - 312418 295 ## Kvar_4460 ferredoxin 280 144 Op 4 . + CDS 312399 - 313661 1376 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 313719 - 313753 1.6 - Term 313588 - 313626 -0.7 281 145 Tu 1 . - CDS 313665 - 314105 514 ## COG1846 Transcriptional regulators - Prom 314227 - 314286 4.2 + Prom 314111 - 314170 3.5 282 146 Op 1 2/0.507 + CDS 314393 - 315025 823 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 283 146 Op 2 3/0.465 + CDS 315022 - 315786 1100 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 284 146 Op 3 4/0.394 + CDS 315783 - 317249 1999 ## COG1012 NAD-dependent aldehyde dehydrogenases 285 146 Op 4 4/0.394 + CDS 317251 - 318108 1211 ## COG3384 Uncharacterized conserved protein 286 146 Op 5 2/0.507 + CDS 318118 - 318498 685 ## COG3232 5-carboxymethyl-2-hydroxymuconate isomerase 287 147 Op 1 5/0.254 + CDS 318607 - 319410 1196 ## COG3971 2-keto-4-pentenoate hydratase 288 147 Op 2 6/0.141 + CDS 319421 - 320218 1165 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 289 147 Op 3 5/0.254 + CDS 320240 - 321598 1979 ## COG0477 Permeases of the major facilitator superfamily 290 147 Op 4 . + CDS 321608 - 322498 1113 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 322640 - 322699 2.5 291 148 Op 1 4/0.394 + CDS 322724 - 324286 2262 ## COG2368 Aromatic ring hydroxylase 292 148 Op 2 . + CDS 324306 - 324818 667 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 324826 - 324876 2.5 - Term 324811 - 324864 3.0 293 149 Tu 1 . - CDS 324893 - 325603 292 ## KP1_0732 ascBF operon repressor - Prom 325651 - 325710 8.6 - Term 325647 - 325679 -0.8 294 150 Tu 1 . - CDS 325731 - 326354 139 ## KPK_4844 hypothetical protein - Prom 326399 - 326458 3.1 + Prom 326591 - 326650 2.2 295 151 Tu 1 . + CDS 326739 - 328889 3372 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 328946 - 328986 4.3 + Prom 328913 - 328972 2.8 296 152 Op 1 3/0.465 + CDS 328999 - 329202 300 ## COG2879 Uncharacterized small protein 297 152 Op 2 . + CDS 329214 - 330170 1288 ## COG0523 Putative GTPases (G3E family) + Prom 330477 - 330536 5.3 298 153 Tu 1 . + CDS 330564 - 331109 766 ## Kvar_4483 YfaZ family protein + Term 331166 - 331194 1.0 - Term 331153 - 331181 1.0 299 154 Tu 1 . - CDS 331205 - 332575 1860 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 332621 - 332680 3.0 300 155 Tu 1 . - CDS 332734 - 333648 761 ## COG5464 Uncharacterized conserved protein 301 156 Op 1 2/0.507 + CDS 333866 - 334681 663 ## COG2207 AraC-type DNA-binding domain-containing proteins 302 156 Op 2 . + CDS 334729 - 335391 670 ## COG1280 Putative threonine efflux protein 303 156 Op 3 4/0.394 + CDS 335396 - 336676 1694 ## COG2733 Predicted membrane protein 304 156 Op 4 . + CDS 336733 - 337977 1572 ## COG0477 Permeases of the major facilitator superfamily 305 156 Op 5 . + CDS 338003 - 338242 481 ## Kvar_4490 hypothetical protein + Prom 338245 - 338304 6.2 306 157 Op 1 4/0.394 + CDS 338340 - 339491 1671 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 307 157 Op 2 . + CDS 339501 - 340268 637 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 308 157 Op 3 . + CDS 340265 - 340621 178 ## KPK_4859 hypothetical protein 309 158 Op 1 . - CDS 340651 - 341754 734 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 310 158 Op 2 3/0.465 - CDS 341775 - 342242 758 ## COG0700 Uncharacterized membrane protein 311 158 Op 3 . - CDS 342235 - 342918 781 ## COG3314 Uncharacterized protein conserved in bacteria + Prom 343062 - 343121 3.3 312 159 Tu 1 . + CDS 343282 - 344196 894 ## COG0583 Transcriptional regulator + Term 344371 - 344417 0.4 313 160 Op 1 . - CDS 344199 - 345263 1526 ## Kvar_4498 hypothetical protein 314 160 Op 2 7/0.085 - CDS 345253 - 346320 1478 ## COG1566 Multidrug resistance efflux pump 315 160 Op 3 . - CDS 346327 - 346791 682 ## COG1846 Transcriptional regulators - Prom 346813 - 346872 5.0 316 161 Tu 1 . - CDS 346957 - 347121 82 ## COG5457 Uncharacterized conserved small protein - Prom 347204 - 347263 2.3 + Prom 347172 - 347231 3.2 317 162 Tu 1 . + CDS 347299 - 348711 1578 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 348896 - 348930 -0.9 318 163 Op 1 7/0.085 - CDS 348784 - 349203 642 ## COG0346 Lactoylglutathione lyase and related lyases 319 163 Op 2 9/0.028 - CDS 349197 - 349784 539 ## COG0583 Transcriptional regulator - Prom 349997 - 350056 80.3 320 164 Tu 1 . - CDS 350358 - 350564 294 ## COG0583 Transcriptional regulator - Prom 350590 - 350649 2.8 + Prom 350549 - 350608 2.9 321 165 Tu 1 . + CDS 350651 - 351433 1005 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 322 166 Op 1 11/0.014 - CDS 351471 - 352427 1011 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 323 166 Op 2 21/0.000 - CDS 352424 - 353395 1409 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 324 166 Op 3 16/0.000 - CDS 353388 - 354872 194 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 325 166 Op 4 . - CDS 354923 - 355906 1074 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 356141 - 356200 3.4 326 167 Tu 1 . + CDS 356410 - 357417 1318 ## COG0180 Tryptophanyl-tRNA synthetase 327 168 Tu 1 . - CDS 357466 - 358860 1290 ## COG2199 FOG: GGDEF domain - Prom 358898 - 358957 3.2 + Prom 358996 - 359055 1.8 328 169 Op 1 10/0.014 + CDS 359264 - 360331 980 ## COG0845 Membrane-fusion protein 329 169 Op 2 45/0.000 + CDS 360328 - 363072 3416 ## COG1131 ABC-type multidrug transport system, ATPase component 330 169 Op 3 . + CDS 363072 - 364196 1346 ## COG0842 ABC-type multidrug transport system, permease component - Term 364197 - 364225 1.0 331 170 Tu 1 . - CDS 364237 - 364554 443 ## KP1_0697 hypothetical protein - Prom 364653 - 364712 3.4 - Term 364809 - 364861 5.0 332 171 Tu 1 . - CDS 364878 - 365153 88 ## KPK_4896 hypothetical protein - Prom 365274 - 365333 3.6 Predicted protein(s) >gi|289774778|gb|GG745513.1| GENE 1 69 - 686 694 205 aa, chain - ## HITS:1 COG:ECs0202 KEGG:ns NR:ns ## COG: ECs0202 COG0241 # Protein_GI_number: 15829456 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Escherichia coli O157:H7 # 18 205 1 188 191 363 90.0 1e-101 MLKHAILTALAFFRSKPVAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELK EMGYALVLVTNQSGIARGKFTEAQFETLTEWMDWSLADRGVDLDGIYYCPHHPQGAVEEY RQTCDCRKPHPGMLISARDYLHIDMASSYMVGDKLEDMQAAAAADVGTKVLVRTGKPLTE EAEKAADWVLNSLAELPAAIKKQQK >gi|289774778|gb|GG745513.1| GENE 2 824 - 1855 1310 343 aa, chain + ## HITS:1 COG:STM0247 KEGG:ns NR:ns ## COG: STM0247 COG1135 # Protein_GI_number: 16763636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 343 1 343 343 639 94.0 0 MIKLSNITKVFQQGNRSIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG SVQVDGQELTALSEKELTRARRQIGMIFQHFNLLASRTVFGNVALPLELDNTPQAEIKRR VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGQLIEQDTVSEVFSHPKTPLAQQF IQSTLHLDIPDDYQARLKPTAAADSVPMLRMEFTGHSVDAPLLSETARRFNVNNNIISAQ MDYAGGVKFGIMLTEMHGTQEDTQAAIAWLQEHHVKVEVLGYV >gi|289774778|gb|GG745513.1| GENE 3 1848 - 2501 977 217 aa, chain + ## HITS:1 COG:yaeE KEGG:ns NR:ns ## COG: yaeE COG2011 # Protein_GI_number: 16128191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Escherichia coli K12 # 1 217 1 217 217 306 96.0 2e-83 MSEPMMWLLLRGVWETLAMTFVSGFFGFVLGLPVGVLLYVTRPGQIVANAKLYRTLSALV NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPLQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYNATVMNTVLVLLVILVYLIQFSGDRIVRAVTHK >gi|289774778|gb|GG745513.1| GENE 4 2545 - 3360 1264 271 aa, chain + ## HITS:1 COG:yaeC KEGG:ns NR:ns ## COG: yaeC COG1464 # Protein_GI_number: 16128190 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 271 1 271 271 492 95.0 1e-139 MAFNFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKEKYGLD VELVTFNDYVLPNEALSKGDIDVNAFQHKPYLDQQIKDRGYKLVSVGNTFVYPIAGYSKK IKSLDELQPGSQIAVPNDPTNLGRSLLLLQQVGLIKLKDGVGLLPTSLDIVENPKNLKIV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEGKESPYVNLIVAREDNKDA ENVKKFVQAYQSDEVYEAANKIFNGGAVKGW >gi|289774778|gb|GG745513.1| GENE 5 3468 - 3875 297 135 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4171 NR:ns ## KEGG: Kvar_4171 # Name: not_defined # Def: outer membrane lipoprotein # Organism: K.variicola # Pathway: Two-component system [PATH:kva02020] # 1 135 1 135 135 221 100.0 7e-57 MRALPVCLLALMLSGCSMLSRSPVEPVQSTATPPVKSEPSKPRATRPAPVRIYTDASELV GKPFRDLGEVTGESCQASNQDSPPNIPTARKRLQVNAARMKANAVLLHRCEVTSGTPGCY RQAVCLGSALNVSAQ >gi|289774778|gb|GG745513.1| GENE 6 3872 - 4579 756 235 aa, chain + ## HITS:1 COG:ECs0197 KEGG:ns NR:ns ## COG: ECs0197 COG1720 # Protein_GI_number: 15829451 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 407 85.0 1e-113 MSAFQFAQIGVIRSPYKEKFAVPRQPGLVKHGGGELHLVAPYNQADAVRGLENFSHLWIL FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKGIRCQKDQVILE LGSLDLVDGTPVVDIKPYLPFAEALPDASASYAQQAPLAGMNVSFTPETEAQLLTLEKRY PHIKAFIREVLAQDPRPAYRKEEEAGKNYAVWLLDFNVRWRVIASGFEVFALEAR >gi|289774778|gb|GG745513.1| GENE 7 4693 - 6411 2470 572 aa, chain + ## HITS:1 COG:ECs0196 KEGG:ns NR:ns ## COG: ECs0196 COG0442 # Protein_GI_number: 15829450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1093 94.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN ELNSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYTA YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANIEFAEAVA PKEPRAAATQEMTLVDTPNAKTIAELVEQFDLPIEKTVKTLLVKAVEGSASPLVALLVRG DHELNEVKAEKLPQVASPLTFATEEEIRALVKAGPGSLGPVNLPIPVVIDRTVAVMSDFA AGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGKGTLLIKRGIEVGHIFQLGTK YSQAMNAAVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNFDDRGIIWPDAIAPFQVAILP MNMHKSYRVQELAEKLYAELRAHGIDVLMDDRKERPGVMFADMELIGIPHTIVLGDRNLD NDDIEYKYRRNGEKQLIKTGDIVEYLVKAIKG >gi|289774778|gb|GG745513.1| GENE 8 6471 - 7313 629 280 aa, chain + ## HITS:1 COG:no KEGG:KPK_4527 NR:ns ## KEGG: KPK_4527 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 280 1 280 280 510 100.0 1e-143 MTAPILSSGLLTSALLLLTACTVDVGRSAASASATEGRSPPWAVTLQRQSSIAGSGLHEI DESDLRSGDLLFSSSLGITSLGIRAFSASSVSHVALYLGEGQIAEATGAGVQVISVQQAL AHSDKLFALRVPDLTPDQATAMKNFAWQVKDSGYNYRGIIQFIPYMVTKPLCSLNPFSRN FRQQCVSGLAKAQLGDAASADKKAWFCSEFVSEAFVRAGHPLTLAQAAWISPSDLLHMRE GDVATFKPETQLQYVGHLKLGVYLQAGKLVGLNKPKDDAE >gi|289774778|gb|GG745513.1| GENE 9 7444 - 8139 562 231 aa, chain - ## HITS:1 COG:ECs0194 KEGG:ns NR:ns ## COG: ECs0194 COG3015 # Protein_GI_number: 15829448 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Escherichia coli O157:H7 # 1 230 2 232 236 355 75.0 3e-98 MKKIVFSVIAACSLFALFGCNHRAETDTVQPAAMEELKPMQQSWRGVLPCADCEGIDTSL FLEKDGTWVMNEHYQGAREPSSFASYGTWARTADKLVLTDSKGEKSYFRAKGDKLEMLDR NGSPVQSPLNYTLEPVKASLPTTPMAMRGMYFYMADAATFTDCATGKRVAVANNAQLERD YAAARGNDSRPVLLVVEGHFTLEANPDTGEMMKTLMTDQAGKFIPGKDCSH >gi|289774778|gb|GG745513.1| GENE 10 8182 - 8595 251 137 aa, chain - ## HITS:1 COG:STM0240 KEGG:ns NR:ns ## COG: STM0240 COG1186 # Protein_GI_number: 16763630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 137 1 137 140 171 81.0 3e-43 MITISRSVTLADNEVTLEGIRAQGAGGQHVNKASTAIHLRFDIKASSLPEFYKERLLAAR HHLISADGVVIIKAQEYRSQEMNREAAIARLVALIKELTAVQKSRRETRPTRASKERRLA SKAQKSSVKALRGKVRQ >gi|289774778|gb|GG745513.1| GENE 11 8592 - 9137 658 181 aa, chain - ## HITS:1 COG:STM0239 KEGG:ns NR:ns ## COG: STM0239 COG4681 # Protein_GI_number: 16763629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 278 83.0 3e-75 MALKATIYKAAVNVADLDRNQFLDANLTLAQHPSETQERMMLRLLAWIKYADERLQFTRG LSSDDEPELWLLNDHLGVDLWIELGLPDERRIKKACSRAQAVALFAYNSRAAEIWWQQNQ NKLAAYPKLTIWYLDDAQLAQLSAFADRTMTLQATLQDGSIWLSDARNNLEIHLTAWQAP A >gi|289774778|gb|GG745513.1| GENE 12 9334 - 9534 114 66 aa, chain + ## HITS:1 COG:no KEGG:KPN_00203 NR:ns ## KEGG: KPN_00203 # Name: yaeP # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 66 6 71 71 114 98.0 1e-24 MDHYCELIRKRYAEIASGDLGYIPDALGCVLKVLNEIAADEALSESVREKAAYAAANLLV SDYVNE >gi|289774778|gb|GG745513.1| GENE 13 9527 - 9781 310 84 aa, chain + ## HITS:1 COG:ECs0191 KEGG:ns NR:ns ## COG: ECs0191 COG4568 # Protein_GI_number: 15829445 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 84 3 86 86 146 89.0 1e-35 MNDTYQPINCDDYDNLELACQHHLVLTLALKDGEQLQAKASDLISRKNIEYLVVELAGNV RELRLDKIASFSHPEIGTVVVSES >gi|289774778|gb|GG745513.1| GENE 14 9794 - 11095 1019 433 aa, chain - ## HITS:1 COG:STM0236 KEGG:ns NR:ns ## COG: STM0236 COG0037 # Protein_GI_number: 16763626 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Salmonella typhimurium LT2 # 13 428 14 428 430 544 66.0 1e-154 MTADIAHTLHPHRQLLVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHGLSAHADDW VAHCRQICQQWQVPLVVHHVTLARGGLGVEAHARAARYQAFQDTLNAGEVLVTAQHQDDQ CETLLLALKRGSGPTGLSAMAPSSAFADSRLLRPLLNETRESLRQWALAHQLSWIEDESN QDDTYDRNFLRLRVIPVLRERWPHFSEAVARSASLCAEQEQLLDEMLAAELASLVAEDGS LAITPLTSMSPPRRAALLRRWLAGQQAPMPAREVPERLWHEVALAREDASPCLRLGDFTV RRFQQRLYWVKYLPGQTESVQHWPDWRQPLRLADGLGELMLQPGGRLRPPSADEPVTVRF RASGHLHIVGRHGGRKLKKIWQELGVPPWRRDTTPLLFYGETPIAAADDLFVTTEGEVKD GEGVRLSWRKTGG >gi|289774778|gb|GG745513.1| GENE 15 11161 - 11550 636 129 aa, chain - ## HITS:1 COG:ECs0189 KEGG:ns NR:ns ## COG: ECs0189 COG0346 # Protein_GI_number: 15829443 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Escherichia coli O157:H7 # 1 129 10 138 138 238 86.0 2e-63 MLGLKRVHHIAIIATDYARSKAFYCDILGFTLQSEFYRAERDSWKGDLALNGEYVIELFS FPFPPARPSRPEACGLRHLAFSVDDIDAAVAHLTAHGVECEAIRVDPFTGKRFTFFSDPD DLPLEIYQQ >gi|289774778|gb|GG745513.1| GENE 16 11597 - 13783 3007 728 aa, chain - ## HITS:1 COG:ldcC KEGG:ns NR:ns ## COG: ldcC COG1982 # Protein_GI_number: 16128179 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 12 721 1 710 713 1364 88.0 0 MLDLGEYQEESVNIIAIMGPHGVYHKDEPIKELEAALQRQGFQTIWPQNSADLLQFIEHN PRICGVIFDWDEYSVDLCSDINQLNEYLPLYAFINAHSTMDVSSQDLRMTLWFFEYALGL SEEIATRIGQYTREYLDNITPPFTRALFNYVQEGKYTFCTPGHMGGSAYQKSPVGCLFYD FFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARAFGAEQSYMVTNGTSTSNKIVGM YSAPAGSTLLIDRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRDSIQQKV RDTGGAQWPVHAVITNSTYDGLLYNTTWLKETLDVPSIHFDSAWVPYTHFHPIYQGKSGM SGERIPGKVIFETQSTHKMLAALSQASLIHIKGNYDEETFNEAFMMHTSTSPSYPIVASI ETAAAMLRGNSGKRLIQRSIERALDFRKEVQRLREESDGWFFDIWQPEAVDKAECWPVAP GEDWHGFKDADADHMYLDPVKVTILTPGMDEQGNMDEEGIPAALVAKFLDERGVVVEKTG PYNLLFLFSIGIDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDL AQGIHRLIRQHQLPQLMLSAFDVLPEMKMTPHHAWQRQIKGEVETIELENLVGRISANMI LPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRDEDGVYRVRVL KNDERLAR >gi|289774778|gb|GG745513.1| GENE 17 13864 - 14823 1400 319 aa, chain - ## HITS:1 COG:ECs0187 KEGG:ns NR:ns ## COG: ECs0187 COG0825 # Protein_GI_number: 15829441 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 598 96.0 1e-171 MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGA WQVAQLARHPRRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMEMAERFKMPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSRLSVPVICTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAAEAMGIVAPRLKELKLIDSIVQEPLGGAHRNPEAMAASLKAQLLADLADLDLL SEEELLNRRYQRLMSYGYA >gi|289774778|gb|GG745513.1| GENE 18 14836 - 18318 4645 1160 aa, chain - ## HITS:1 COG:STM0231 KEGG:ns NR:ns ## COG: STM0231 COG0587 # Protein_GI_number: 16763621 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 1160 1 1160 1160 2277 95.0 0 MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTGHGA GIKPIVGADFHVQCDLLGDEFTELTVLAANNTGYQNLTLLISRAYQRGYGALGPWIDRDW LVEHQEGLILLSGGRKGDVGVSLIRGNMPLVEQCVAFYEEHFPDRYFLELIRTGRQDEEA YLHAAVALAEARGLPVVATNDVRFLDTSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL EERLEFLFPDPAVRAEKRPEYDQRLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEGPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLD DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD RLLNDLRGLIGSEQVELEFD >gi|289774778|gb|GG745513.1| GENE 19 18336 - 18935 741 199 aa, chain - ## HITS:1 COG:ECs0185 KEGG:ns NR:ns ## COG: ECs0185 COG0164 # Protein_GI_number: 15829439 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 347 89.0 8e-96 MMEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPAKPIVGLNDSKKLSEKRRLALCDE IKEKALCWSLGRAEPHEIDELNILHATMLAMQRAVAGLSIVPEFVLIDGNRCPSLPMPSL AVVKGDSRVAEISAASILAKVTRDAEMATLDLAFPHYGFAQHKGYPTAVHLQKLQEHGAT EHHRRSFGPVKRALGLASN >gi|289774778|gb|GG745513.1| GENE 20 18932 - 20083 1263 383 aa, chain - ## HITS:1 COG:lpxB KEGG:ns NR:ns ## COG: lpxB COG0763 # Protein_GI_number: 16128175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Escherichia coli K12 # 1 382 1 382 382 684 90.0 0 MAEPRPLTIALVAGETSGDILGAGLIRALKARIPDARFVGVAGPLMQAEGCEAWYEMEEL AVMGIVEVLGRLRRLLHIRADLTRRFGELRPDVFVGIDAPDFNITLEGNLKKQGIKTIHY VSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKFNVPCRFIGHTMADAMPLDPDKGA ARDRLGIPHNVRCLALLPGSRGAEVEMLSADFLKTAQLLRVTYPDLQVVVPLVNAKRREQ FERIKAETAPDMIVHMLDGQARDAMIASDAALLASGTAALECMLAKCPMVVGYRMKPFTF WLAKRLVKTDYVSLPNLLAGRELVKELLQDECEPQALAAALQPLLADGKTSHEMHETFRA LHQQIRCNADEQAADAVLELAKQ >gi|289774778|gb|GG745513.1| GENE 21 20083 - 20871 746 262 aa, chain - ## HITS:1 COG:lpxA KEGG:ns NR:ns ## COG: lpxA COG1043 # Protein_GI_number: 16128174 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Escherichia coli K12 # 1 262 1 262 262 480 92.0 1e-136 MIDKTAFVHPTAIVEEGAVIGANVHIGPFCIVGANVEIGEGTVLKSHVVVNGHTKIGRDN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGNDNLLMIN AHVAHDCTLGDRCILANNATLAGHVSLDDFVIIGGMTAVHQFCIIGAHVMVGGCSGVAQD VPPFVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLLYRSGKTLDEAKPEIAELA TQHPEVQPFVDFFARSTRGLIR >gi|289774778|gb|GG745513.1| GENE 22 20875 - 21330 443 151 aa, chain - ## HITS:1 COG:STM0227 KEGG:ns NR:ns ## COG: STM0227 COG0764 # Protein_GI_number: 16763617 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Salmonella typhimurium LT2 # 1 151 1 151 151 292 98.0 2e-79 MTTDTHTLHIEEILELLPHRYPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI LPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT RRGLTRFKGVALVDGKVVCEATMMCARSREA >gi|289774778|gb|GG745513.1| GENE 23 21436 - 22338 971 300 aa, chain - ## HITS:1 COG:STM0226 KEGG:ns NR:ns ## COG: STM0226 COG1044 # Protein_GI_number: 16763616 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 300 42 341 341 547 93.0 1e-155 MVNPKYREHLAACQASAVVMTQDDLPFAHSAALVVRNPYLTYARMAQILDTTPQPAQDIA PSAVIDPSAKLGNNVAIGANAVIESGVVLGDNVVIGAGCFVGKNTKIGAGSRLWANVTIY HEIEIGENCLIQSSTVIGADGFGYANDRGNWVKIPQLGRVIIGDRVEIGACTTIDRGALD DTLIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICD KVTVTGMGMVMRPISEPGVYSSGIPLQPNKAWRKTAALVMNIDEMSKRLKAIERKVNQQD >gi|289774778|gb|GG745513.1| GENE 24 22465 - 22950 437 161 aa, chain - ## HITS:1 COG:STM0225 KEGG:ns NR:ns ## COG: STM0225 COG2825 # Protein_GI_number: 16763615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 209 90.0 2e-54 MKKWLLAAGLGLAMVTSAQAADKIALVNMNSLFQQVAQKTGVSNTLENEFKGRASELQRM EGDLQSKMQRLQSMKPGADRTKLEKDVMAQRQTFSQKAQAFEQDRARRSNEERGKLVTRI QTAVQSVAKDQSIDLVVDANAVAYNSSDVKDITADVLKQVK >gi|289774778|gb|GG745513.1| GENE 25 23072 - 25501 3130 809 aa, chain - ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 809 1 810 810 1471 91.0 0 MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRPGDTVTDDDIS NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAKIQQI NIVGNHAFSTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYITVNITEGDQYKLSGVQVTGDLAGHSAEIEALTKVEPGELYNGAK VTKMENDIKKLLGRYGYAYPRVQSQPEINDSDKTVKLHVNVDAGNRYYVRKIRFEGNDTS KDAVLRREMRQMEGAWLGSDLVDQGKDRLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYTELSVTNPYFTV DGVSLGGRIFYNDFDANDADLSDYTNKSYGTDVTLGFPVNEYNTLRAGVGYVHNSLSNMQ PQVAMWRYLNSMGQYPDNTNDRNSFSANDFTFNYGWTYNKLDRGFFPTEGSRVNLNGKVT IPGSDNEYYKATLDTATYVPIDNDHQWVVLGRTRFGYGDGIGGKEMPFYENFYAGGSSTV RGFQSNTIGPKAVYFPSSSRHDGDSGYTNDCKSTESAPCKSDDAVGGNAMAVASLELITP TPFISDKYANSVRTSVFWDMGTVWDTHWDSNAYGGYPDYSDPSNIRMSAGIAVQWMSPLG PLVFSYAQPFKKYDGDKAEQFQFNIGKTW >gi|289774778|gb|GG745513.1| GENE 26 25533 - 26885 1080 450 aa, chain - ## HITS:1 COG:STM0223 KEGG:ns NR:ns ## COG: STM0223 COG0750 # Protein_GI_number: 16763613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Salmonella typhimurium LT2 # 1 450 1 450 450 786 88.0 0 MLSVLWNLAAFIIALGVLITVHEFGHFWVARRCGIRVERFSIGFGKALWRRMDKQGTEFV IALIPLGGYVKMLDERVEAVAPEMRHYAFNNKTVGQRAAVIAAGPIANFIFAIFAYWLVF IIGVPGVRPVVGEITPNSVAAQAQIAKGTELKAIDGIETPDWDAVRMQLVAKIGNPQTIL TVAPFGTNQRQDKIVDLRHWAFEPDKQDPVTSLGIQPRSAQIDTVLAEVQTGSAAQKAGL QAGDRIVKVDGQPLTQWMTFVNLVRDNPGKALALEIERQGSALPLTLTPDAKTVKGKAEG FAGVVPKVIPLPEEYKTVRQYGPFAAIAEATDKTWQLMSLTVRMLGKLITGDVKLNNLSG PISIAQGAGMSAEFGLIYYLMFLALISVNLGIINLFPLPVLDGGHLLFLAIEKLKGGPVS ERVQDFSYRIGSILLVLLMGLALFNDFSRL >gi|289774778|gb|GG745513.1| GENE 27 26897 - 27679 812 260 aa, chain - ## HITS:1 COG:STM0222 KEGG:ns NR:ns ## COG: STM0222 COG0575 # Protein_GI_number: 16763612 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Salmonella typhimurium LT2 # 1 260 26 285 285 385 86.0 1e-107 MGFAIVTLVVCMLAAWEWGQLSGFTSTSQRVWLAVLCGLLLAAMLFLLPEYHYDVHQPMV EGSLWASFAWWIVALLLVLSYPASAAFWRHSKVLRLIFGILTIVPFFWGMLALRAWHYTD NHYSGAVWLLYVMILVWGADSGAYMFGKMFGKHKLAPKVSPGKTWQGFFGGLLTAAVISW AYGVWAHLDVTPTVLLVCSVVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID SLTAAVPVFACLLLLVFRTI >gi|289774778|gb|GG745513.1| GENE 28 27767 - 28543 462 258 aa, chain - ## HITS:1 COG:STM0221 KEGG:ns NR:ns ## COG: STM0221 COG0020 # Protein_GI_number: 16763611 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 7 258 1 252 252 452 87.0 1e-127 MDLKRVMLSANQTVSEISPTHGCRHVAIIMDGNGRWAKRQGKIRAFGHKAGAKSVRRAVS FAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRVIGDTTR FNARLQERIRKAEALTANNTGLTLNIAANYGGRWDITQGVRLLAKQVQDGTLLPEEITEE MLSQQVCMHELAPVDLVIRTGGEHRISNFLIWQIAYAELYFTDVLWPDFAEQDFEGALHA FVNRERRFGGTEPGGSHA >gi|289774778|gb|GG745513.1| GENE 29 28763 - 29965 1127 400 aa, chain - ## HITS:1 COG:STM0220 KEGG:ns NR:ns ## COG: STM0220 COG0743 # Protein_GI_number: 16763610 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Salmonella typhimurium LT2 # 1 396 1 396 398 623 81.0 1e-178 MKQLTVLGSTGSIGCSTLDVVRHNPGCFSVAALVAGKNVDRMVEQCLEFTPRYAVMDDAQ SAERLRIRLHEHGCRTEVLSGQQAAAEVAALDEVDQVMAAIVGAAGLVPTLAAIRAGKTV LLANKESLVTCGRLFMEAVQRSRARLLPVDSEHNAIFQSMPETIQQHLGYADLTRNGVSS ILLTGSGGPFRETDVAELSAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN ASAQQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMGWPQRLSSGVKPLDFC QLSNLSFSAPDYARYPCLKLAMDAFEVGQAATTALNAANEESVAAFLHGDIRFTDIAAVN LAVLDKMNLQEPQSIDDVLVIDADARAVAHQQLNRLGAQA >gi|289774778|gb|GG745513.1| GENE 30 30193 - 30750 681 185 aa, chain - ## HITS:1 COG:ECs0174 KEGG:ns NR:ns ## COG: ECs0174 COG0233 # Protein_GI_number: 15829428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 284 95.0 8e-77 MISDIRKDAEIRMEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVE DSRTLKINVFDRSMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGE AEQARVAVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEA ELMQF >gi|289774778|gb|GG745513.1| GENE 31 30901 - 31626 973 241 aa, chain - ## HITS:1 COG:STM0218 KEGG:ns NR:ns ## COG: STM0218 COG0528 # Protein_GI_number: 16763608 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 461 99.0 1e-130 MATNAKPVYKRILLKLSGEALQGSEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNL FRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDNYSWA EAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPS ATMYDQLTYSEVLDKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLIT E >gi|289774778|gb|GG745513.1| GENE 32 31774 - 32625 996 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 279 283 388 71 1e-106 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG VIKTKIEGNYGYILEVNCQTDFVAKDGGFQAFADKVLDAAVAGKISDVEVLKAQFEEERV ALVAKIGENINIRRIAVLEGDVLGSYQHGARIGVLVAAKGADEELVKQLAMHVAASKPEF VKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSK SVGQLLKEHNADVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS >gi|289774778|gb|GG745513.1| GENE 33 32745 - 33470 1234 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206581012|ref|YP_002240343.1| ribosomal protein S2 [Klebsiella pneumoniae 342] # 1 241 1 241 241 479 100 1e-134 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA E >gi|289774778|gb|GG745513.1| GENE 34 33794 - 34588 990 264 aa, chain + ## HITS:1 COG:ECs0170 KEGG:ns NR:ns ## COG: ECs0170 COG0024 # Protein_GI_number: 15829424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 514 95.0 1e-146 MAISIKTSEDIEKMRVAGRLAAEVLEMIEPWVKPGVSTGELDRICNDYIVNEQKAISACL GYHGYPKSVCISVNEVVCHGIPDDGKLLKDGDIVNIDVTVIKDDFHGDTSKMFIVGKPTI LGERLCRITQESLYLALKMVKPGINLRTIGAAIQKYVEAEGFSVVREYCGHGIGRGFHEE PQVLHYDSPETNVVLKPGMTFTIEPMVNAGKKEIRSMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEILTLRKDDTIPAIISHDE >gi|289774778|gb|GG745513.1| GENE 35 34646 - 37309 3302 887 aa, chain + ## HITS:1 COG:STM0214 KEGG:ns NR:ns ## COG: STM0214 COG2844 # Protein_GI_number: 16763604 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Salmonella typhimurium LT2 # 3 887 2 890 890 1597 88.0 0 MSNSLPDTASPLLPVPPEHPVSWPQGDLNCAAIKAHIDTFQHWLGEAFDSGIAAEQLIAA RTEFIDQLLQRLWIAYGFESVCDLALVAVGGYGRGELHPLSDVDLLILSRKKLPDEQAQK VGELLTLLWDVKLEVGHSVRTLEECLLEGLSDLTVATNLIESRLLIGDVALFLELQKHIF SDGFWPSEKFFAAKVEEQNVRHQRYHGTSYNLEPDVKSSPGGLRDIHTLQWVARRHFGAT SMDEMVGFGFLTEAERNELNECLHQLWRIRFALHLELTRYDNRLLFDRQLSVARRLGYEG DGNQPIEHMMKDFFRVTRRVSELNQMLLQLFEEAILALTEDEKPRPIDDDFQLRGTLIDL RDDTLFIREPQAILRMFYMMVRNSTITGIYSTTLRHLRHARRHLTQPLCYIPEARTLFLS MLRHQGAVSRGLLPMHRHSVLWAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFA KEETRSRHPLCVELWPRLTHPELILIAALFHDIAKGRGGDHSILGAQDVLKFAELHGLNS RETQLVAWLVRHHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNE TLWNSWKQSLLRELYFATEKQLRRGMQSTPDMRERVRHHQLQALALLRMDNINEEALHQI WNRCRANYFVRHTPTQLAWHARNLLRHDLNKPMILLSSQATRGGTEIFIWSPDRPYLFAA VCGELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHDAIRHGLEQTITQRSW EPPAPRRQAAKLRHFSVPTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLGISLH GARITTIGERVEDLFIIATADRRGLNNELQQEVQQRLTEALNPNDKG >gi|289774778|gb|GG745513.1| GENE 36 37340 - 38164 1012 274 aa, chain + ## HITS:1 COG:STM0213 KEGG:ns NR:ns ## COG: STM0213 COG2171 # Protein_GI_number: 16763603 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Salmonella typhimurium LT2 # 1 274 1 274 274 515 98.0 1e-146 MQQLQNVIESAFERRADITPANVDTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLK KAVLLSFRINDNQVIDGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYLGQSTKIYDRETGEVFYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID >gi|289774778|gb|GG745513.1| GENE 37 38272 - 38658 549 128 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4203 NR:ns ## KEGG: Kvar_4203 # Name: not_defined # Def: structural protein # Organism: K.variicola # Pathway: not_defined # 1 128 1 128 128 219 100.0 4e-56 MYDNLKSLGITNPDEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD GVGQGYKEVQEISPNLRYVIDELDQICQRDRTEIDLKRKILDDLRHLESVVTNKISEIEA DLEKLTRK >gi|289774778|gb|GG745513.1| GENE 38 38775 - 39932 1613 385 aa, chain - ## HITS:1 COG:STM0210 KEGG:ns NR:ns ## COG: STM0210 COG3835 # Protein_GI_number: 16763600 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Salmonella typhimurium LT2 # 1 385 1 385 385 698 95.0 0 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPESLRKYGELVCMTAEMMLEQSR LMHLLAQDSRLREELVMNLIQAEEHTPALNEWAQRLGIDLNQPRVVAMIEVDSGQLGVDS AMAELQQLQNALTTPDRNNLVAIVSLTEMVVLKPALNSFGRWDADDHVRRVEQLIARMKE NGQLRFRVALGNFFTGPGSIARSYRTARTTMMVGKQRMPESRSYFYQDLMLPVLLDSLRG GWQANELARPLARLKAMDNNGLLRRTLQAWFRHNVQPLATSKALFIHRNTLEYRLNRISE LTGLDLGSFDDRLLLYIALQLDEQR >gi|289774778|gb|GG745513.1| GENE 39 40101 - 41534 1690 477 aa, chain - ## HITS:1 COG:STM0209 KEGG:ns NR:ns ## COG: STM0209 COG0265 # Protein_GI_number: 16763599 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Salmonella typhimurium LT2 # 1 477 1 475 475 717 91.0 0 MKKTTLAMSALALSLGLALSPLSASAAETASSATNAQQMPSLAPMLEKVMPSVVSINVEG STTVNTPRMPRNFQQFFGDNSPFCQDGSPFQSSPFCQGGGQGGQPDGGQQQKFMALGSGV IIDAAKGYVVTNNHVVDNATTIKVQLSDGRKFDAKVVGKDPRSDIALIQIQDPKNLTAIK LADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSG GALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTEQMVKYGQVKRGELGIMGTE LNSELAKAMKVDAQRGAFVSQVMPGSAAAKAGIKAGDVITTLNGKAISSFAALRAQVGTM PIGSKVELGLLRDGKPVTVTVELQQSNQTQVDSSTIFNGIEGAEMSNKGQDKGVVVNNVK AGTPAAQIGLKKGDIIVGANQQPVKNIADLRKIFDAKPSVLALNIQRGDASIYLLLQ >gi|289774778|gb|GG745513.1| GENE 40 41669 - 43183 1382 504 aa, chain - ## HITS:1 COG:dgt KEGG:ns NR:ns ## COG: dgt COG0232 # Protein_GI_number: 16128153 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Escherichia coli K12 # 1 504 1 504 505 850 83.0 0 MAKIDFRNKINWRRRFRSPPRVETERDILRIFESDRGRIVNSPAIRRLQQKTQVFPLERN AAVRTRLTHSLEVQQVGRYIAKEVLSRLKEQKLLEEYGLEELTGPFESVVEMACLMHDIG NPPFGHFGEAAINDWFRQRLAPGDALGQPLTDDRCEVQALRLHEGETALNALRRKVRQDL CSFEGNAQGIRLVHTLMRMNLTWAQVGCILKYTRPAWWFEATPASHSYLMKKPGYYLAEE EYVARLRKELDLAPYNRFPLTWIMEAADDISYCVADLEDAVEKRIFSAEQLYQHLYDAWG NHEKGSLFSQVVENAWEKSRANYLRQSAEDQFFMYLRVNTLNKLVPYAARRFIDNLPAIF TGDFNHALLEDDSDCSQLLELYKNVAMKQVFSHPDVEQLELQGYRVISGLLDIYQPLLKL SLEDFSELVAQERVRRLPIASRLYQKLSTRHRLAYVEAVNKLVRTAPEFALMEYYYRCRL IQDYISGMTDLYAWDEYRRLMAVE >gi|289774778|gb|GG745513.1| GENE 41 43267 - 43965 857 232 aa, chain + ## HITS:1 COG:STM0207 KEGG:ns NR:ns ## COG: STM0207 COG0775 # Protein_GI_number: 16763597 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 385 89.0 1e-107 MKIGIIGAMEEEVTLLRDKIENRQTITIGGSEIYTGQLHGVDVALLKSGIGKVAAATGAT LLLERCQPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK ADDKLVAAAEDCIKALDLNAVRGLIVSGDAFINGSVALAKIRHNFPQAIAVEMEATAIAH VCHNFKVPFVVVRAISDVADQQSHLSFEEFLAVAARQSTLMVENLVQNLARG >gi|289774778|gb|GG745513.1| GENE 42 43958 - 44758 875 266 aa, chain + ## HITS:1 COG:STM0206 KEGG:ns NR:ns ## COG: STM0206 COG0614 # Protein_GI_number: 16763596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 265 1 265 266 363 74.0 1e-100 MAKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAKTI EQVASWQGMNLERIVALKPDVVLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLR QLAQWSPQPEKAQQAAQAMQQEYDTLKARYANAPKKRVFLQFGSAPLFTSGPGSIQDQVL GLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALH SDWFERASPRIILAAKQLCAALDQVK >gi|289774778|gb|GG745513.1| GENE 43 44795 - 45418 762 207 aa, chain + ## HITS:1 COG:STM0205 KEGG:ns NR:ns ## COG: STM0205 COG2860 # Protein_GI_number: 16763595 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 312 92.0 3e-85 MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK DPTDLVVAMVTSMLTILLVRQPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAV CMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIVHATAHDTFHLPLENSAMMGM VVTLVIRLAAIRWHLKLPTFALDDNGR >gi|289774778|gb|GG745513.1| GENE 44 45504 - 45848 556 114 aa, chain - ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 218 95.0 2e-57 MSDDVALPLEFTEAAANKVKHLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDM TIEKQGVGLVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSV >gi|289774778|gb|GG745513.1| GENE 45 45930 - 47348 1888 472 aa, chain - ## HITS:1 COG:STM0203 KEGG:ns NR:ns ## COG: STM0203 COG0038 # Protein_GI_number: 16763593 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 1 472 1 473 473 738 87.0 0 MKAETPSFEAHQFVRVRRGDAVRRLIQRDKTPLAVLLMAAVVGTLAGLVGVAFEKSVNWV QNQRIGALAQVADHWYLVWPLAFILSALLAMVGYFLVRRFAPEAGGSGIPEIEGALEELR PVRWWRVLPVKFIGGMGTLGAGMVLGREGPMVQLGGNIGRMVLDIFRMRSPEARHTLLAT GAASGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRIFNGEAAIIE VGKLSNAPVNTLWLYLVLGMLFGCFGPLFNFLVLRTQDIFQRIHGGNIKKWVLMGGVIGG ICGLLGLMQPSAVGGGFNLIPIAAAGNFSVGLLLFIFIARVVTTLICFSSGAPGGIFAPM LALGTLLGTAFGMAAIPLFPAYHLDAGTFAIAGMGALLAASVRAPLTGIVLVLEMTDNYQ LILPMIITCLGATLLAQFLGGKPLYSTILQRTLAKQEAEQAAKAQQAPRENT >gi|289774778|gb|GG745513.1| GENE 46 47529 - 48809 1769 426 aa, chain + ## HITS:1 COG:ECs0158 KEGG:ns NR:ns ## COG: ECs0158 COG0001 # Protein_GI_number: 15829412 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 805 93.0 0 MSKSENLYHAARELIPGGVNSPVRAFTGVGGTPLFIERADGAYLYDVDGKAYIDYVGSWG PMVLGHNHPAIRNAVIEAASRGLSFGAPTEMEVKMAELVTELVPTMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDLASVRAAFEQYPQDIACIIVEPVAGNMNCIPPQPEFLPGLSALCDEFGALLIIDEVM TGFRVALAGAQAYYGVEPDLTCLGKIIGGGMPVGAFGGRREVMDALAPTGPVYQAGTLSG NPIAMAAGFACLSEVAQPGVHETLTDLTNQLADGLLNAARETGIPLVVNNVGGMFGIFFT DAETVTCYQDVVKCDVERFKRFFHLMLEEGVYLAPSAFEAGFMSIAHSEEDINNTIDAAR RVFAKL >gi|289774778|gb|GG745513.1| GENE 47 49033 - 51015 2531 660 aa, chain - ## HITS:1 COG:STM0194 KEGG:ns NR:ns ## COG: STM0194 COG0609 # Protein_GI_number: 16763584 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Salmonella typhimurium LT2 # 23 660 48 685 685 848 85.0 0 MNARLSPLAILLLTGLLVAAFALSIVNLNVALPYAQWRQALWQPDIDNIAQMLFHYSLLP RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGMTVTTLWAIPGVLASQFA ALAGACLVGALVFGVSWGKRLSPVTLILAGLVVSLYCGAVNQLMVIFHHDQLQSMFLWST GTLTQTDWSVVQRLWPQLLGGAMLTLLLLRPLTLMGLDDGVARNLGLALSLARLGVLTLA IAISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLLLAALIGALILWLSDQIILWLSR VWREVSTGSVTALIGAPLLLWLLPRLRSISAPVMNGGDKALIERRHVPWFALGGLALLLL AITAALTFGRDAHGWQWASGDLLAQLMPWRWPRVLSALFAGVMLAVAGCIIQRLTGNPMA SPEVLGISSGAAFGVVLMLFFVPGNAFVWLLPAGSLGAAATLLVILIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQILTWMSGSTYSATPEMALRSGVVMLALLALAPL CRRWLTILPLGGEAARAVGMALTPSRIGLLLLAASLTATATLTIGPLSFVGLMAPHIARM LGFRRTMPHMVISGLTGGMLLVFADWCGRMIMFPYQIPAGLLSTFIGAPYFIYLLRKQSR >gi|289774778|gb|GG745513.1| GENE 48 51012 - 51905 1020 297 aa, chain - ## HITS:1 COG:STM0193 KEGG:ns NR:ns ## COG: STM0193 COG0614 # Protein_GI_number: 16763583 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 7 296 7 296 296 441 73.0 1e-123 MMNPTLITRRRLLTAMALSPLLWQMRGAQAANIDPQRVVALEWLPAELLLALGVTPYGVA DIPNYRLWVNEPALPASVIDVGLRTEPNLELLTQMKPSFIVWSAGYGPSPEKLARIAPGR GFTFSDGKRPLAMAQRSLLEMADLLGKQQQAKRHLAEFDALMENLRPRFARRGDRPLLMI SLLDARHVLVFGENCLFQEVLDRFGIQNAWRGEAAFWGSVTVGIDRLAAFNEADVICFDH GNDREMAQLLATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFARVLADAQGRAAI >gi|289774778|gb|GG745513.1| GENE 49 51905 - 52702 183 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 17 238 135 354 398 75 30 3e-12 MLEQTPHSETTFALNGVTFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRH QPPSAGEVLLDGQPLESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRF GAADREKVEEAIALVGLKPLAQRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDI AHQVDVLALVHRLSQQRGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRSDT LEQIYGIPMGILPHPAGAAPVSFVY >gi|289774778|gb|GG745513.1| GENE 50 52748 - 54955 2833 735 aa, chain - ## HITS:1 COG:STM0191 KEGG:ns NR:ns ## COG: STM0191 COG1629 # Protein_GI_number: 16763581 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Salmonella typhimurium LT2 # 1 735 1 729 729 904 65.0 0 MARPKTAQPNHSLRKIAVVVATAVSGMSVYAQAAEQPKQEETITVVAAPAAQESAWGPAP TIAAKRSATATKTDTPIEKTPQSVSVVTRQEMEMRQPTTVKEALSYTPSVFSTRGSSTTY DVVTIRGFTTSTTVNTNQYLDGMKLQGNNYSEVSMDPYFLERVEVMRGPTSVLYGNSNPG GIVSMVSKRPTTEPLKEVQFKMGTDNLWQTGFDFSDAIDDAGVWSYRLTGLGRSQDTQQQ MAKSTRYAVAPSFSWRPDDKTDFTFLSNFQNDPDAGYYGWLPREGTVVPYYDANGKAHKL PTDFNEGEADNKISRRQKMVGYSFSHQFDDTFTVRQNLRYAEVDTLYRSVYGNGYVAPGY MNRAYVRSDEHLNTFTVDTQLQSAFATGAVSHTLLTGVDYSRMRNDVDADYGTADPISMS NPQYGNPNIQVTFPYAVLNRMEQTGLYAQDQMEWDKWVMTLGGRYDYATTSTLTRSSNSL AENHDQQFTWRGGINYLFDNGISPYFSYSESFEPVSGSGLNGQPFDPSRGKQYEAGVKYV PKDMPVVVTAAVYQLTKDKNLTADPANQAFSIQTGEIRSRGLELEAKAAVNANINVTAAY SYTDAEYTHDTVFNGKRPAEVPRNMASLWADYTFHETALSGLTIGAGARYIGSTVSYYKT DTSTGNKNDAFNVAGYALMDATVKYDLARFGLPGSSVGVNVNNLFDREYVSSCYSEYACY WGAGRQVVATATFRF >gi|289774778|gb|GG745513.1| GENE 51 55190 - 57760 3506 856 aa, chain - ## HITS:1 COG:STM0190 KEGG:ns NR:ns ## COG: STM0190 COG0744 # Protein_GI_number: 16763580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Salmonella typhimurium LT2 # 1 856 1 840 840 1406 86.0 0 MAGDDREPIGRKGRPSRPTKQKVTRRRVREEDYDDEYDDDDYEDEKPVPRKGKGNGGKPR RKRRWLWLLVKLGIVFAVLIAAYGVYLDQKIRSRIDGKVWELPAAVYGRMVNLEPDMQIS KNEMVRLLNATQYRQVSAMTRPGEYTVQANSIEMIRRPFDFPDSKEGQVRARLTFEGDHL ETIENMDNNRQFGFFRLDPRLITMLQSPNGEQRLFVKRSGFPDLLVDTLLATEDRHFYEH DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIVDAR YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASVY NPWRNPKLALERRNLVLRLLQQQQVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQ ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAATEGIPVLKKQRKLADLETAMVVVDRF TGEVRAMVGGAEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPNQYRLNTWIADAPVTI RLSNGQTWSPQNDDRRFSGQVMLVDALTRSMNVPTVNLGMALGLPAVVDTWTKLGAPKNQ LNAVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGTVLYQSYPQAERAV PAQAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGSQVTITW VGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLALTAPEDVVDMGVDSNGNLVCSGGVRS LPVWTTQPDALCRQGEMMQQQQLQQQEANNPFNQSGQQQPQQQQQQQQQQQQQQQPKQQE KSDGVAGWIKDMFGSN >gi|289774778|gb|GG745513.1| GENE 52 58348 - 58722 74 124 aa, chain + ## HITS:1 COG:no KEGG:KPK_4571 NR:ns ## KEGG: KPK_4571 # Name: pulS # Def: pullulanase secretion protein PulS # Organism: K.pneumoniae_342 # Pathway: Bacterial secretion system [PATH:kpe03070] # 1 124 10 133 133 228 100.0 5e-59 MRIPLIFSLCVVAVLSGCQQKPASTLSPAISSQAQLEQLSSVAAGTRYLKNKCNRSDLPA DETIYRAAVNVGKARGWGNIDVATLSQNSDRLYQQLLQDSTPEATQCSQFNRQLAPFIAS LRSD >gi|289774778|gb|GG745513.1| GENE 53 58762 - 59319 400 185 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4219 NR:ns ## KEGG: Kvar_4219 # Name: not_defined # Def: general secretion pathway protein B # Organism: K.variicola # Pathway: not_defined # 1 185 1 185 185 310 98.0 2e-83 MIVRDDSERGIPPLVAHQPPSTQADAPVSRGRMVHIPGWIIPLYAGLFIALGWFGGEQWR HPSPPQTLPLPVAHAALLPLTAAGETAPKNPPSAVKPSAPAAPVVDSDTLPPLRYSAHVY ASLPEKRSIVLNGKAWSEGDSPLPNLVVEQIQQDVTIFSFNGTTFTLAALDDWPGGKIDE EPKGE >gi|289774778|gb|GG745513.1| GENE 54 59576 - 62884 3979 1102 aa, chain - ## HITS:1 COG:DR0405 KEGG:ns NR:ns ## COG: DR0405 COG1523 # Protein_GI_number: 15805432 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Deinococcus radiodurans # 256 1085 125 908 910 500 38.0 1e-141 MLRYTCHALFLGSLVLLSGCDNSSSSSPSGSPGSPGNPGNPGTPGTPDPQDVVVRLPDVA VPGEAAHASANQTVIHLVDIAGITSSTPADYATKNLYLWNNETCDALSAPVADWNDVSTT PTGSDKYGPYWVIPLTKESGCINVIVRDGTNKLIDSDLRVSFGDFTDRTVSVIAGNSAVY DSRADAFRAAFGVALADAHWVDKTTLLWPGGENKPIVRLYYSHSSKVAADSNGEFTDKYV KLTPTTVSQQVSMRFPHLASYPAFKLPDDVNVDELLQGETVAISAESDGILSSATQVQTA GVLDDTYAAAAEALSYGAQLTDSGVTFRVWAPTAQQVELVVYSADKKVVASHPMTRDSAS GAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYSQVVDLNDSAL KPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQESNMVQ HLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEINSAVKSSEFAGYCDSG STVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEGTARI KEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESA TCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMGYHPKAQILSAWERIKALNPDI YFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQGVGSG AGVQPNELTSMTDDQARHLADLTRLGMAGNLADFVLIDKDGAVKKGSEIDYNGAPGGYAA DPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQGIAFDQQGSEL LRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATPGETE LKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQAGAS LDSRVDGIVVAINAAPESRTLQDFAGTSLQLSAIQQAAGDRSLASGVQVAADGSVTLPAW SVAVLELPQGESQGAGLPVSSK >gi|289774778|gb|GG745513.1| GENE 55 63191 - 64033 396 280 aa, chain + ## HITS:1 COG:VC2734 KEGG:ns NR:ns ## COG: VC2734 COG3031 # Protein_GI_number: 15642727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulC # Organism: Vibrio cholerae # 17 273 25 301 305 131 33.0 1e-30 MPVSVMGLTNINKGIIKLLPQIVTLIILITAIPQLAKLTWRVVFPVSPEDISALPLTASP MAESELKTERPVFTLFGLAAKNNPAPTDATHLNQVPVSSLKLRLTGLLASSNPARSIAII EKGNQQVSLSSGDTIPGYDARIVAILPDRIIVNYQGRKEAILLFNDTRAPSSSPATAATP PLVKQLREQPQNILTYLSISPVLSGDKLQGYRLNPGKDASLFRQSGLQENDLAIALNGID LRDQAQAQQALQHLNEQTEITLTVEREGQRHDIAFALGDE >gi|289774778|gb|GG745513.1| GENE 56 64061 - 66016 2359 651 aa, chain + ## HITS:1 COG:gspD KEGG:ns NR:ns ## COG: gspD COG1450 # Protein_GI_number: 16131204 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Escherichia coli K12 # 19 623 30 636 654 626 56.0 1e-179 MLTVLLILTPLLFRPAIAEEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVRGTITVRSY DMLNEEQYYQFFLSVLDVYGFAVINMNNGVLKVVRAKDAKTSAVPVASEAAPGEGDEVVT RVVPLTNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAAVIKRLLTIVERVDNA GDRSVVTVPLSWASAAEVVKLVTELNKDSSKSALPGSMVANVVADERTNAVLVSGEPNSR QRIIAMIKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGISSSLQNDKQSAKPVAAIDKN IIIKAHGQTNALIVTAAPDVMNDLERVIAQLDIRRPQVLVEAIIAEVQDADGLNLGIQWA NKNAGMTQFTNSGLPISTVIAGANQYNKDGTVSSSLASALGSFNGIAAGFYQGNWAMLLT ALSSSTKNDILATPSIVTLDNMQATFNVGQEVPVLTGSQTTSGDNIFNTVERKTVGIKLK VKPQINEGDAVLLEIEQEVSSVADSASSTSSDLGATFNTRTVNNAVLVGSGETVVVGGLL DKSVTDTADKVPLLGDIPVIGALFRSESKKVSKRNLMLFIRPTIIRDRDEYRQASSGQYT AFDNAQTKQRGKDSSEATLSNDLLHIYPKQETQAFRQVSAAIDAFNLGGRP >gi|289774778|gb|GG745513.1| GENE 57 66013 - 67506 2023 497 aa, chain + ## HITS:1 COG:VC2732 KEGG:ns NR:ns ## COG: VC2732 COG2804 # Protein_GI_number: 15642726 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Vibrio cholerae # 5 491 9 502 503 553 60.0 1e-157 MTPVAERRPLLPFAWARAHHLVLLSDGERCEALCRSDTAARALLEARRLADGPMSVSRLA PDAFEKVLVLSYQRDSAEAHRMMADIGNELDLYTLAEELPDTDDLLDSEDDAPIIRLINA MLTEAIKEKASDIHIETYERHLQIRFRVDGVLREILRPQRRLAALLISRIKVMASLDIAE KRIPQDGRMALRIGGRAIDVRVSTLPSSHGERVVLRLLDKNSVNLDLLTLGMPPALLDRV DALIARPHGIILVTGPTGSGKSTTLYAALSRLDAHERNIMTIEDPVEYELEGIGQTQVNA KVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGAISR LQDMGVEPFLLSTSLLAVMSQRLVRQLCPHCRQPTQADADTARQMAVPVGARLWQPKGCP ECNFIGYRGRTGIHELLLVDDRVRAAIHRGENEITLIQQLGPAWQTLSHAGRDKALAGIT SWEEVMRVTEQQTTESV >gi|289774778|gb|GG745513.1| GENE 58 67508 - 67612 89 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALFRYQALDPQGKTRRGVQQADSARHARQLLPS >gi|289774778|gb|GG745513.1| GENE 59 68075 - 68983 1201 302 aa, chain + ## HITS:1 COG:VC2731 KEGG:ns NR:ns ## COG: VC2731 COG1459 # Protein_GI_number: 15642725 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Vibrio cholerae # 1 301 105 405 406 309 54.0 4e-84 MAGVRSKVLEGHSLAEAMRGYPACFDGLFCAMVAAGETSGHLDGVLNRLADYTEQRQQLR ARLQQAMIYPIVLTLVAISVIAILLSTVVPKVVEQFVHLKQALPFSTRLLMNLSDIVRSA GPWLVLLSLLALLTLRYLLRQPGRRLAWDRMLLRLPVIGRVARSVNSARYARTLSILNAS AVPLLLSMRISAGVLSNAWARSQLAAASESVREGVSLHRALESTALFPPMMRYMIASGEQ SGELTAMLERAAENQDRELSAQIQMALSLFEPLLVVTMAGMVLFIVLAILQPILQLNTLM SM >gi|289774778|gb|GG745513.1| GENE 60 69004 - 69426 752 140 aa, chain + ## HITS:1 COG:VC2730 KEGG:ns NR:ns ## COG: VC2730 COG2165 # Protein_GI_number: 15642724 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 1 137 4 142 146 192 69.0 2e-49 MQRQRGFTLLEIMVVIVILGILASLVVPNLMGNKEKADRQKVVSDLVALEGALDMYKLDN SRYPNTEQGLQALVTAPAAEPHARNYPEGGYIRRLPQDPWGNEYQLLSPGQHGAIDVFSV GPDGMPDTNDDIGNWTLGKK >gi|289774778|gb|GG745513.1| GENE 61 69426 - 69941 426 171 aa, chain + ## HITS:1 COG:hofH KEGG:ns NR:ns ## COG: hofH COG2165 # Protein_GI_number: 16131208 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 3 153 4 145 169 65 33.0 3e-11 MSQRGFTLLEMMLVLLLIGVSASMVLLAFPSARTQEATQILARFQAQLDFVRERGQQTGQ LFGIVIHPDRWQFMRLQPADEDAPAAADDRWGNAQWLPLQAGRVTTAETLPRTRLTLRFP DGQAWTPGEQPDVLIFPGGEVTPFQLRIDAATGITIDAQGDSQPLAAREQP >gi|289774778|gb|GG745513.1| GENE 62 69938 - 70303 438 121 aa, chain + ## HITS:1 COG:VC2728 KEGG:ns NR:ns ## COG: VC2728 COG2165 # Protein_GI_number: 15642722 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 1 118 1 115 117 70 37.0 1e-12 MKRQAGMTLIEVMVALVIFALAGLAVMQSTLQQTRQLGRMEEKILASWLADNQLVQLRLE KRWPALSWSETTVEAAGTRWFVRWQGVETALPQLRALDVEVRRQKSDPAPLATLRTWVTP P >gi|289774778|gb|GG745513.1| GENE 63 70312 - 70896 719 194 aa, chain + ## HITS:1 COG:VC2727 KEGG:ns NR:ns ## COG: VC2727 COG4795 # Protein_GI_number: 15642721 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Vibrio cholerae # 1 193 13 209 221 115 37.0 7e-26 MRGFTLIETLLALAILAVLSAAAVMVLQNVIRADGLTREKSQQIAALQRAFRQIADDVTH IIPRRARNSDTLFFAGRFQLQSDDWGLAFSRSGWPNPLGILPRSEIQNVSYRLRQQQLER LSFDQQDPLTGSQPTVRVVLREVTAFRLRFYADGRWQETWDRSQTLPQGLEITLTLANSG EITRLFLLTPGGSQ >gi|289774778|gb|GG745513.1| GENE 64 70893 - 71873 912 326 aa, chain + ## HITS:1 COG:VC2726 KEGG:ns NR:ns ## COG: VC2726 COG3156 # Protein_GI_number: 15642720 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Vibrio cholerae # 1 319 1 324 336 164 36.0 2e-40 MKNRQRGVALLMVLFILALMMILASAMTERTAVMYQHTAVTLDNLQARWYALAAENMAAA LLQRDALDSPSQTNLAQSWAQEGRRFTLDDGEIRATIRDGRACFNLNAINHRADETSGGT PYPTDVFVRLLALLGESPLRASQIAAALGDWTDSDGQPRLNGAEDEVYMAQTPGYLAANQ PMQDVSELRLLAGMDAALYQRLLPFVCVQPDDALQVNVNTLRPSQAALLVALFPGELTLQ EAQQLLHNRPRTGWSSVAAFLAQPTLQKTDTTLARPWLTVHSTRFIAAFSVATGNLRFQL HSVLQQEGRTFTVVQRRYGLSMVVDE >gi|289774778|gb|GG745513.1| GENE 65 71896 - 73062 1019 388 aa, chain + ## HITS:1 COG:VC2725 KEGG:ns NR:ns ## COG: VC2725 COG3297 # Protein_GI_number: 15642719 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulL # Organism: Vibrio cholerae # 50 379 59 400 407 105 25.0 2e-22 MLIVRFAPGLAPLHWQLFAPGEPHHEASGRWPADDASPFPALAAHYPAWVLIPASDCAFH SLTLPAGLRKPPLQVAPFLLEEQLADDVEATHFALLHRQQAQCEIVAVQRQKMRDWLARC ESLSLRPLALTPDVLALPWHPPAWSAVQVDEQWLIRHQPWGGMAAENVWLTELLQSEAEE PVIDSYSPPPAAPGVWRAQPAQTLLTLAARYPATQQLSLLQGEFAVRRRQPAQATWRSAQ YAALALALLVGTNSVLDHLDLARQAEAAQQASRAFYHRWFPTEKKVINPRLQMQQHLQTL ARQAQHAPLVDRLSALQNILSDTPGIRLRTLSWDAASNRLQLDIAAVSSRALEQFTQRAQ PRFRVRPGDMTTKPDGIEGQLTLEENNG >gi|289774778|gb|GG745513.1| GENE 66 73055 - 73540 536 161 aa, chain + ## HITS:1 COG:VC2724 KEGG:ns NR:ns ## COG: VC2724 COG3149 # Protein_GI_number: 15642718 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulM # Organism: Vibrio cholerae # 1 123 6 130 166 67 29.0 1e-11 MANLLIWWRQRTPSEQRLLLGLAGLLVVCALWYGLWQPWRAREAQWRQTLMKEQASLRWM TQQTPRLQQLSQQPTPTAKEALTALVMREAASHGLAVARLQPQGKRLQVTLQPCTFQALM AWLDAPAMRGVNAVSLSVTGQPSRPGWVMVNHLLLERDDES >gi|289774778|gb|GG745513.1| GENE 67 73530 - 74276 800 248 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4232 NR:ns ## KEGG: Kvar_4232 # Name: not_defined # Def: type II secretion system protein N # Organism: K.variicola # Pathway: not_defined # 1 248 1 248 248 412 98.0 1e-114 MKAKGIAGGLLLVLYLLWLAATAPARLLVPMLPPGVQVGSLSGSVWRGAAQPVYWHGERL ERLAWSLTLAGWQVSLSDPRGVEGQARLWGLRDLRLQEGRLTTPASLLSRWLMSTMPVSA EGEVTFSLAEAHFSEGRCRQITAGGAQWRQARLHSPVGSLELAQVNGTFRCTADGAVALT LRQDSHQLSLSGQGTLSPDGRYLFRGTLQPRQGMPPLLALLVTRPAAKNEPGRTPWQIQG KWLPQEQK >gi|289774778|gb|GG745513.1| GENE 68 74273 - 75073 1202 266 aa, chain + ## HITS:1 COG:VC2426 KEGG:ns NR:ns ## COG: VC2426 COG1989 # Protein_GI_number: 15642423 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Vibrio cholerae # 11 266 7 278 291 195 47.0 6e-50 MTTLTALSLHFPLVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCP QCRQPIAWRDNIPLLSFLWLGRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLA GGLLLLSFLLMLARIDARTQLLPDRLTLPLLWAGLLFNLNEVYIALPDAVAGAMAGYLAL WSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASACGLVWTLLQRLWTRQ SLQQPLAFGPWLALAGGGIFLWQQMV >gi|289774778|gb|GG745513.1| GENE 69 75120 - 76004 1311 294 aa, chain - ## HITS:1 COG:ECs0152 KEGG:ns NR:ns ## COG: ECs0152 COG1643 # Protein_GI_number: 15829406 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 1 294 531 824 824 462 81.0 1e-130 MGAMLDADDALGRHEWLIAPLLLQGSASPDARMLLALPVDIGELIAARPELAQRSDTVEW DEAQGTLKAWRRTVIGQLVIKTQPLAKPSEAELHQAMLNGIREKGLGVLNWTPEAEQLRL RLQCAAQWLPEEAWPAVDDASLLASLEAWLLPQMNGVHSLRALKALDLRQALQDWLPWPL RQKLDRELPTHYTVPTGSRLAIRYHAENPPALAVRMQEMFGEATTPVIAEGRVPLVLELL SPAQRPLQITRDLSAFWQGSYREVQKEMKGRYPKHVWPDDPANTAPTRRSKKYS >gi|289774778|gb|GG745513.1| GENE 70 76797 - 77966 1227 389 aa, chain - ## HITS:1 COG:ECs0152 KEGG:ns NR:ns ## COG: ECs0152 COG1643 # Protein_GI_number: 15829406 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 1 389 16 404 824 593 85.0 1e-169 MSSLPVAAVLPELLSALQHAPQVLLNAPTGAGKSTWLPLQILAEGNIAGRIILLEPRRLA ARNVAQRLAELLGEKPGETVGYRMRAETCVGPQTRLEVVTEGILTRMIQRDPELAGVGLV ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQRLLPEAPVVVSEGRA YPVERRFNPLPTHQRFDEAVAVAAAELLRHEQGSMLLFLPGVGEIQRVQEQLTERVAEDV ILCPLYGALPLSEQRKAILPAPAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDP RTGLTRLVTQRISQASMTQRAGRAGRLSPGICLHLLGKEQAERAAAQSEPEILHSDLSAL LLELLQWGCHDPAALAWLDQPPAVNLAAS >gi|289774778|gb|GG745513.1| GENE 71 78039 - 78575 565 178 aa, chain + ## HITS:1 COG:ECs0151 KEGG:ns NR:ns ## COG: ECs0151 COG1514 # Protein_GI_number: 15829405 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Escherichia coli O157:H7 # 1 172 4 175 179 263 76.0 1e-70 MSEPKRLFFALELPSAVQKQIVQWRASHFPEDAGRPVAADNLHLTLAFLGEVSAEKQRAL AALAGRLRQPGFTLTLDDAGQWLRSRVVWLGTRQPPRGLLQLASMLRAQAARSGCYQSPQ PFHPHITLWRDARQAVPIPAPGFHWSFPVNEFVLYESSFGRGRTRYTALERYPFHKES >gi|289774778|gb|GG745513.1| GENE 72 78575 - 79291 466 238 aa, chain + ## HITS:1 COG:STM0187 KEGG:ns NR:ns ## COG: STM0187 COG1489 # Protein_GI_number: 16763577 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Salmonella typhimurium LT2 # 1 234 1 234 234 369 76.0 1e-102 MQFDPPLQPAILLKRYKRFLADVVTPDGRELTLHCPNTGAMTGCAAPGDTVWYSTSDNAK RKYAHTWELTETQQGAVICVNTLRANSLAKEAISAGIIPELSGYNQLKSEVKYGEENSRI DIMLQADDRQNCYIEVKSVTLAEKEYGYFPDAVTTRGQKHLRELMAVAANGDRAVILFAV LHSAIDRFSPAHHIDARYAQLLTEARDKGVEILAWKAELSTTKMTLNKPIAVVLNPGK >gi|289774778|gb|GG745513.1| GENE 73 79454 - 79909 687 151 aa, chain + ## HITS:1 COG:STM0186 KEGG:ns NR:ns ## COG: STM0186 COG1734 # Protein_GI_number: 16763576 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 151 260 99.0 5e-70 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFKRILEAWRNQLRDEVDRTVT HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|289774778|gb|GG745513.1| GENE 74 79969 - 80850 998 293 aa, chain + ## HITS:1 COG:yadB KEGG:ns NR:ns ## COG: yadB COG0008 # Protein_GI_number: 16128137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 288 11 298 308 462 77.0 1e-130 MTDSRYIGRFAPSPSGELHFGSLIAALGSYLQARANQGIWRVRIEDIDPPREVPGAADTI LRQLDHYGLHWDGDVLWQSQRHEAYREALAWLGEQGLSYYCTCTRARIHAVGGIYDGHCR DLGLGAENAALRLRQTRPVLQFTDRLRGTLVANEPLAREDFIIHRRDGLFAYNLAVVVDD HFQGITEIVRGADLIEPTVRQISLYQHFGWQAPDYLHLPLALNADGNKLSKQNHAPALPE GDPRPEIVRALRFLNQDIAQDWQALSMDDLLSQAVANWQPAKIEHSQMAPAEL >gi|289774778|gb|GG745513.1| GENE 75 80946 - 82307 1782 453 aa, chain + ## HITS:1 COG:ECs0147 KEGG:ns NR:ns ## COG: ECs0147 COG0617 # Protein_GI_number: 15829401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 433 1 433 454 775 89.0 0 MLSREEREAEAAVEPMPMTVIPREQHAISRKDISENALKVMYRLNKAGYESWLVGGGVRD LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGHT TDRVTSQQGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLQDGV IRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPLPRLATLLHDVPPARLFEEVL KLLQAGYGYQTYMLLREYNLFQPLFPTITRYFTERGDSPMERIISQVLKNTDNRIHNDMR VNPAFLFAVMFWYPLLETAQKIAQESGLAYYDAFALAMNDVLDEACRTLAIPKRITTLIR DIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLELRAGAENNSELQRLTKWWGEFQVAAP PEQKDMLNDLGDDPAPRRRHRRPRKRAPRQGNA >gi|289774778|gb|GG745513.1| GENE 76 82301 - 82783 184 160 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 140 118 255 278 75 35 3e-12 RMTLVYIALGSNLASPLEQVQAAIRALGDIPHSRVVNVSSFYRTPPLGPQDQPDYLNAAV ALETTLAPNALLDHTQRIELQQGRVRKAERWGPRTLDLDIMLFGDEVINSPRLTVPHYDM KNRGFMLWPLFEIAPDLHFPDGPALRAVLDDLGAEKPASW >gi|289774778|gb|GG745513.1| GENE 77 82903 - 83694 986 263 aa, chain + ## HITS:1 COG:STM0182 KEGG:ns NR:ns ## COG: STM0182 COG0413 # Protein_GI_number: 16763572 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Salmonella typhimurium LT2 # 1 263 1 263 263 489 91.0 1e-138 MKPTTIALLQKCKQEKKRFATITAYDHSFAKLFADEGINVLLVGDSLGMTVQGHDSTLPV TVEDIAYHTRAVRRGAPNSLLLADLPFMAYATPEQTFENAAIVMRAGANMVKLEGGAWLA DTVKMLAERAVPVCGHLGLTPQSVNVFGGYKVQGRGDAAQTLFDDALALEAAGAQLLVLE CVPVELAKRITDVLTIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAEAGDIR AAVRQYIAEVESGVYPGEEHSFH >gi|289774778|gb|GG745513.1| GENE 78 83706 - 84560 1177 284 aa, chain + ## HITS:1 COG:STM0181 KEGG:ns NR:ns ## COG: STM0181 COG0414 # Protein_GI_number: 16763571 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 491 86.0 1e-139 MLIIESVLLLRQHIRRLRQEGKRIALVPTMGNLHDGHMKLVDEAKASADVVVVSIFVNPM QFDRADDLARYPRTLQDDCEKLNKRHVDFVFAPTPAEVYPQGTEGQTYVDVPGLSTMLEG ASRPGHFRGVSTIVSKLFNLVQPDVACFGEKDFQQLALIRKMVADMGYDIEIIGVPIVRA KDGLALSSRNGYLTADQRKIAPGLYKVLSAVAEKLAAGDRQLDEIIAIAEQELNEKGFRA DDIQIRDADTLLELTDASQRAVILMAAWLGQARLIDNQIVTLGQ >gi|289774778|gb|GG745513.1| GENE 79 84654 - 85034 503 126 aa, chain + ## HITS:1 COG:ECs0135 KEGG:ns NR:ns ## COG: ECs0135 COG0853 # Protein_GI_number: 15829389 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Escherichia coli O157:H7 # 1 126 1 126 126 231 90.0 3e-61 MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAI AAERGSRIISVNGAAAHCASVGDILIIASFVTMSDEEARTWQPNIAYFEGDNEMKRQAKA IPVQVA >gi|289774778|gb|GG745513.1| GENE 80 85070 - 86224 1153 384 aa, chain - ## HITS:1 COG:ECs0134 KEGG:ns NR:ns ## COG: ECs0134 COG0726 # Protein_GI_number: 15829388 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 1 384 26 409 409 672 82.0 0 MQTTEDAVIWAQVGNHVVSVGNVRAGQILAVVPTAADYYEFRFGFGTGFIDKGHLEPVQG KQRVEDRLGDLNKPLSNQNLLTWKDTPLYNTPAVSSVPFGTLATNLRYPILSKLKDRLNQ TWFQIRIGDRLAWVSSLDAQEDNGIPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMTW LRDQGYTTLTLYQLEGYVRNKINLPARAVVITFDDGLKSVNRYAYPVLKQYGFHATAFII SSRIKRHPQKWDPKSLQFMSISELRQIQDVFDIQSHTHFLHRVDAGRRPILFSRNYHNIL FDFARSRRALSQFNPHVLYLSYPFGGYNATAVQAANDAGFHMAVTTVRGKVKPGDNPFLL KRLYILRTDSLETMSRLISNQPQG >gi|289774778|gb|GG745513.1| GENE 81 86382 - 86822 488 146 aa, chain - ## HITS:1 COG:STM0178 KEGG:ns NR:ns ## COG: STM0178 COG2893 # Protein_GI_number: 16763568 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 144 1 144 146 231 74.0 4e-61 MLGWVITCHDELAQEMLDRLERKFGPLAQCRAVNYWRNLSSNMLSRMMCDALHATDSGDG VIFLTDRTGAAPYRAAALMSHKHTHCEVISGVSYSLLERMYLLRNTLSSEAFRQAIVSAG GPMVSSLWHQQQKNPPFRLRHDTFGN >gi|289774778|gb|GG745513.1| GENE 82 86945 - 87715 1360 256 aa, chain - ## HITS:1 COG:STM0173 KEGG:ns NR:ns ## COG: STM0173 COG0842 # Protein_GI_number: 16763563 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 419 94.0 1e-117 MMQLYWVALKSIWTKEIHRFMRIWIQTLVPPVITMTLYFVIFGNLIGSRIGEMHGFTYMQ FIVPGLIMMAVITNAYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCV GILVTAVSLFFVPFQVHSWLFVALTLILTAVLFSLAGLLNAVFAKTFDDISLIPTFVLTP LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRFGFLGINDVPLVTTFAVLVVFIVAF YLLCWSLIQRGRGLRS >gi|289774778|gb|GG745513.1| GENE 83 87712 - 88638 960 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 302 1 304 311 374 63 1e-102 MTIALELKQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG QVNVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAVARSEKY LKQLDLWEKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK DLNDRGTTIILTTHYLEEAEMLCRNIGIIQHGALVENTSMKALLSKLKSETFILDLAPKS PVPKLEGYQYQLVDTSTLEVEVLREQGINSVFAQLSAQGVQVLSMRNKANRLEELFVTLV HERKGESA >gi|289774778|gb|GG745513.1| GENE 84 88823 - 89485 720 220 aa, chain + ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 220 1 220 220 442 95.0 1e-124 MNDIDTLISNNALWSKMLVEEDPGFFEKLSQTQKPRFLWIGCSDSRVPAERLTGLEPGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLIDNWL LHIRDIWFKHSSLLGEMPEERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA YGIHDGLLRDLDVTAVSRETLEQRYRHGISNLKIKHINHK >gi|289774778|gb|GG745513.1| GENE 85 89543 - 90079 906 178 aa, chain - ## HITS:1 COG:STM0170 KEGG:ns NR:ns ## COG: STM0170 COG0634 # Protein_GI_number: 16763560 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 178 1 178 178 329 94.0 2e-90 MKHTVEVMIPESEIKARIAELGRQINEHYQDSGSEMVLVGLLRGSFMFMADLCREVQVPH EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREP KSLAICTLLDKPSRREVNVPVEFVGFAIPDEFVVGYGIDYAQRYRHLPYIGKVTLLDE >gi|289774778|gb|GG745513.1| GENE 86 90283 - 92673 3189 796 aa, chain + ## HITS:1 COG:STM0169 KEGG:ns NR:ns ## COG: STM0169 COG4993 # Protein_GI_number: 16763559 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 796 1 796 796 1396 89.0 0 MAETKSQQSRLLVTLTALFAAFCGLYLLIGGAWLVVLGGSWYYPIAGLVMLGVTVMLLRG KRAALWLYAALLLATMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLPVPSAGA VGALVVALLISGGMLTWAGFNDPQEVNGTLSADATPAAPISNVADGDWPAYGRNQEGQRF SPLKQINADNVKNLKEAWVFRTGDLKQPNDPGEITNEVTPIKVGDTLFLCTAHQRLFALD AATGKEKWHFDPQLNADPSFQHVTCRGVSYHEAKADNAPADVVADCPRRIILPVNDGRLF AVNADNGKLCETFANKGILNLQTNMPVTTPGMYEPTSPPIITDKTIVIAGAVTDNFSTRE PSGVIRGFDVNTGKLLWAFDPGAKDPNAIPSDEHHFTLNSPNSWAPAAYDAKLDLVYLPM GVTTPDIWGGNRTPEQERYASSIVALNATTGKLAWSYQTVHHDLWDMDMPSQPTLADIEV NGKTVPVVYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVAKTQPFSDLSFRPK KDLTGADMWGATMFDQLVCRVIFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPN RQVAIANPMALPFVSKLIPRGPGNPMEPPKDAKGSGTESGVQPQYGVPYGVTLNPFLSPF GLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSLPFPMPVKLPFTMGMPMLGGPISTAG NVLFIGATADNYLRAYNMSNGEKLWEARLPAGGQATPMTYEVNGKQYVVISAGGHGSFGT KMGDYIVAYALPDDAK >gi|289774778|gb|GG745513.1| GENE 87 92756 - 94366 1671 536 aa, chain - ## HITS:1 COG:yacK KEGG:ns NR:ns ## COG: yacK COG2132 # Protein_GI_number: 16128116 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli K12 # 1 536 1 516 516 854 78.0 0 MQRRDFLKLTAAVSVASALPLWSRAVFAASRPALPIPTLLTADARNRIALTIQAGKTQFG ALHATTWGYNGSLLGPALQLTQGKTITVDITNQLAEETTLHWHGLEVPGEVDGGPQGVIA PGATRTVSFTPTQRAATCWFHPHQHGTTGRQVAMGLAGLVLIEDEESGRLLLPKQWGIDD VPVIVQDKKFTAAGEIDYQLDVMSAAVGWFGDTLLTNGALYPEHAAPRGWLRLRLLNGCN ARSLNFATSDKRPLYVVASDGGLLAEPVKVDELPVLMGERFEVLVDTSDGKPFDLVTLPV SQMGMAIAPFDKPQPVLRVQPLVIPASGKLLDTLATLPALPSLTGLTQRQLQLSMDPMLD RMGMQALMEKYGDQAMAGMDHGMMGHGGMGDMSNMHHGDMSNMSNMNHEAGRDHGMSSGK GFDFHNANRINGKAFDMNVPMFAAARGQYERWVISGKGDMMLHPFHIHGTQFRILSENGK PPAAHRSGWKDTVRVEGDVSEVLVKFDHPAPKEFAYMAHCHLLEHEDTGMMLGFTV >gi|289774778|gb|GG745513.1| GENE 88 94534 - 94860 539 108 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4252 NR:ns ## KEGG: Kvar_4252 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 108 12 119 119 199 100.0 2e-50 MVLGSLLALSANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNTQIRRALVFFAQQNQ WDLSNYDSYNMKALGEDSYRDLSGINIPTAKKCKALARDSLSLLAYVK >gi|289774778|gb|GG745513.1| GENE 89 95114 - 95524 296 136 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4253 NR:ns ## KEGG: Kvar_4253 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 136 1 136 136 223 100.0 1e-57 MNISPTLRIIPLAALLLVGCSNTSSRQQVKPITTPLTSQQQAEQERAASEQERIESCRKA LDSLKEVNPQQATKLSNEFNALVRSASQYNNVRDKVADPTRLGIDSMYQFKSIKLCSDIQ KTLIDTLVQRGENKLP >gi|289774778|gb|GG745513.1| GENE 90 95521 - 97467 1377 648 aa, chain + ## HITS:1 COG:fkpA KEGG:ns NR:ns ## COG: fkpA COG0545 # Protein_GI_number: 16131226 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli K12 # 436 646 37 252 270 86 31.0 1e-16 MNKPATLTPKAPLLMLVAALALSTSFYAGATPAFLDYAQQQTQQAQAQEEKSSAATAKQA SDARQNADNKKTTANNAQLQKRIASQQATIAQKDKIIQQLKKQLTATPATDTSIANEQAA LNNKIKQLQLALTAATAENETLIKKEVVARNNTLQQSQAAALKQIQQLTSQLQSVEAENK RLSTSLTTLNTDKQTLTSRLAAAEKAQQTALGQLTALDTDKQTLTARLMAAEKEKQAALD QAKALNADKQPLATRLAVVEKEKLAALEQVKALTTDKQSLTIRLAAAEKAQQAALDQAKT LNADKQPLASRLAAAEKEKLSALDQVKALTTDKQSLTIRLDAAEKTQQAALDQVKALNAD KQSLTARLAAAEKAPTTRPDTAAAPKNEPPEMAAVVAAYRLQADKDNAQLRMKEDEIQLL RTQLSVQSKTRSGESAAAKLSASGEQQAYAIGASMGAEALNVLTTRRTQGITVDAGLVLR GIEDAFSGQLRLGEQERNKALFDVSQQVFQNLNKIEQKNISAGKKYQQAFARKKDVVFKD GVYSRVDYPGKGKISGNDLVTVVIKEMLTDGTVINDMEAKDQALTQKLDAYPPVFRGPLQ RLQNHGSLTLVVPPEKAYGSKGLPPKIPPGATMVYSVRIVDSQPAPAK >gi|289774778|gb|GG745513.1| GENE 91 97614 - 98474 1074 286 aa, chain + ## HITS:1 COG:STM0166 KEGG:ns NR:ns ## COG: STM0166 COG0421 # Protein_GI_number: 16763556 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Salmonella typhimurium LT2 # 1 285 1 285 286 545 90.0 1e-155 MADNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDE FIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQY LPNHSAGAYDDPRFTLVIDDGVNFVNQTTQTFDVIISDCTDPIGPGESLFTSAFYEGCKR CLNPGGVFVAQNGVCFLQQDEAVGSHRKLSHYFRDVSFYQAAIPTYYGGIMTFAWASDNE ALRHLSSEIIQARFHKANLTCRYYNPAIHTAAFALPQYLHDALSAP >gi|289774778|gb|GG745513.1| GENE 92 98499 - 99293 1047 264 aa, chain + ## HITS:1 COG:ECs0124 KEGG:ns NR:ns ## COG: ECs0124 COG1586 # Protein_GI_number: 15829378 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 514 95.0 1e-146 MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILTETCSIIG ANILNIARQDYEPQGASVTILVSEEPVDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYP ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF IDHEINSIQNFMSDDIKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTRPEELTAEE RKVITDLLWKEMREIYYGRNIPAV >gi|289774778|gb|GG745513.1| GENE 93 99451 - 99813 512 120 aa, chain - ## HITS:1 COG:ECs0123 KEGG:ns NR:ns ## COG: ECs0123 COG3112 # Protein_GI_number: 15829377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 17 136 136 199 87.0 9e-52 MDYEFLRDITGVVKVRMSMDHEAIGHWFNEEVKDNLALLDEVEQAARTVKGSERSWQRAG HEYTLWLDGEEVMIRANQLEFSGDEIEEGMSYYDEESLSLCGVEDFLQVVAAYREFMQQR >gi|289774778|gb|GG745513.1| GENE 94 100001 - 102598 3605 865 aa, chain - ## HITS:1 COG:STM0158 KEGG:ns NR:ns ## COG: STM0158 COG1049 # Protein_GI_number: 16763548 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Salmonella typhimurium LT2 # 1 865 1 865 865 1654 96.0 0 MLEEYRKHVAERAAMGIVAKPLDATQMAALVELLKNPPAGEEEFLLDLLINRVPPGVDEA AYVKAGFLAAIAKGEATSPLVTPEKAVELLGTMQGGYNIHPLIDALDDAKLAPIAAKALS HTLLMFDNFYDVEEKAKAGNEHAKRVMQSWADAEWFLNRPQLAEKITVTVFKVTGETNTD DLSPAPDAWSRPDIPLHALAMLKNAREGIDPDQPGVVGPIKQIEALQQKGYPLAYVGDVV GTGSSRKSATNSVLWFMGDDIPNVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSN LNMGDVIDVYPFKGEVRNHETNELLASFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREA LGLPHSDVFRQAKDVAESTRGFSLAQKMVGRACGVAGIRPGAYCEPKMTSVGSQDTTGPM TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGVIH SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM QPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASA ERSAAGCTIKLNKEPIVEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLADPQLLEA DADAEYAAVIDIDLADIKEPILCAPNDPDDARLLSDVQGEKIDEVFIGSCMTNIGHFRAA GKLLDSHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVA DGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGKLPTPEEYQTFVAQVDKTAEDT YRYLNFNQLDQYTEKADGVIFQTAV >gi|289774778|gb|GG745513.1| GENE 95 103030 - 104637 1008 535 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4259 NR:ns ## KEGG: Kvar_4259 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 535 1 540 540 706 94.0 0 MSLPFKPHIIALLCSAGLLAAAGTLYVQSRTPATIAEPPAQPAPAASTTQPVTTTYTQAQ IDQWVAPIALYPDSLLSQVLMASTYPDNVMQAVQWSQDNPAMKGDAAVQAVASQPWDPSV KSLVAFPALLAMMGENPPWVENLGNAFLAQPHDVMDSVQRLRAIAQQTGTLKSTPQQKVI VTPAAPVSASSTAATSTTHSAAPAPTQVIKIEPTNPQVVYVPSYNPSTVYGTWPNSAYPP VYLPPPPGEQFTDSFVKGFGYSLGVATTWALFSSIDWDDDDDHHHHDDDYHHGDYSHNGD NINININNFNRITGENLPGNHVNWQHNPAYRGHTPYPDNTVAQRFHQTNVAGGLSTTQHA PVDREAQRQAAMTQLQHNVPAATAGNLAANNASRDAQRQAASAQLKQATQRSNYRGYDST PTSTQQQRREAAKTQLKNPTPQQQQRRETVKSREQNLTPQQQQHRQQIQSATPAQRQQQV SHLRASALSGNESRAPSWQAQQERGLQSRQFSAVNPEERGGARERLSEHHELRRR >gi|289774778|gb|GG745513.1| GENE 96 104649 - 105455 668 268 aa, chain + ## HITS:1 COG:no KEGG:KPK_4617 NR:ns ## KEGG: KPK_4617 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 268 1 268 268 490 99.0 1e-137 MRNLLPIALFTLILSPLAAFAQQQFSTPEQAASALAEALSQQNEAALSKVLGDNWQQFLP TDGIDPSAVDRFQRDWQVKHVIVQQGDNAWLDVGSEAWRLPVPIVKTSQGWRFDMAAGEE EILTRAIGRNELSAIAAMHAYIDAQQDYYQLNHRWAQKIISSEGKKDGLYWPTSPGETPS PLGPAFSPTEPGAGYHGYRFRIIAGRDDQDAALLAWPVEWGETGVMSFMIDLHDTVYQAN LGEESAAKAQAITRFAPDADAGWQVVKP >gi|289774778|gb|GG745513.1| GENE 97 105500 - 105784 85 94 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4261 NR:ns ## KEGG: Kvar_4261 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 94 1 94 94 145 100.0 4e-34 MKRFLTAALVAATCLSGVACAADATIPWADNSGGTETTHIAAMGQDLNAQHQQVTKTNEG VWAANSGSISADEAALSSTKPTFAGDPSLMPHQG >gi|289774778|gb|GG745513.1| GENE 98 105949 - 107373 684 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 268 34 3e-70 MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKSVPKRMLV MGGGIIGLEMGTVYHALGSEIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTA VEAKEDGIYVSMEGKKAPAEAQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGLKHYFDPKVIPSIAYTEPEVAWV GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNAKAKKK >gi|289774778|gb|GG745513.1| GENE 99 107580 - 109478 1349 632 aa, chain - ## HITS:1 COG:STM0153 KEGG:ns NR:ns ## COG: STM0153 COG0508 # Protein_GI_number: 16763543 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 632 1 629 629 913 91.0 0 MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKVS VGDKTETGKLIMIFDSAEGAAAAAPAQEEKKEAAPAAAAPAATAAAKEVHVPDIGGDEVE VTEIMVKVGDTIAAEQSLITVEGDKASMEVPAPFAGTVKEIKINTGDKVSTGSLIMIFEV AGAAPAAAPAQAAAPAAAAPAAAGGAKDVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLIT VEGDKASMEVPAPFAGTVKEIKISTGDKVKTGSLIMVFEVEGAAPAAAPAQAAAPAPAAA PTQAAKPAAAPAAKAEGKTEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILRE DVQAYVKDAVKRAESAPAATAGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSR NWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLDVKFTPVVFIMKAVAAALEQMPRFN SSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKSITELSRELTTISKKARDGKL TAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMMPIS LSFDHRVIDGADGARFITIINNTLSDIRRLVM >gi|289774778|gb|GG745513.1| GENE 100 109493 - 112156 3190 887 aa, chain - ## HITS:1 COG:STM0152 KEGG:ns NR:ns ## COG: STM0152 COG2609 # Protein_GI_number: 16763542 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Salmonella typhimurium LT2 # 1 887 1 887 887 1767 96.0 0 MSERLPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLSEARKGGVKVAAGASTGGY VNTIAVEDEPEYPGNLDLERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATFYEV CFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTEEQMNNFRQEVHGKGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWNVIKVIWGGRWD ELLRKDTSGKLIQLMEETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWAL NRGGHDPKKVYAALKKAQETKGKATVILAHTIKGYGMGDTAEGKNIAHQVKKMNMDGVRY VRDRFNVPVADADLEKLPYVTFPEGSEEHTYLHAQRQKLHGYLPSRQPNFSEKLELPTLE DFAPLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYY SMFGFQRIGDLCWQAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PSYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETI EGSKGKVQLLGSGSILRHVREAAQILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP LETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFDIDAEKVNPRLA >gi|289774778|gb|GG745513.1| GENE 101 112294 - 113073 740 259 aa, chain - ## HITS:1 COG:STM0151 KEGG:ns NR:ns ## COG: STM0151 COG2186 # Protein_GI_number: 16763541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 254 1 254 254 386 93.0 1e-107 MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQSRLWQSFSDPLVELLSDHPESQFDLLETRHALEGIAAYYAALRSN DEDRDRIRELHQAIERAQQSGDLDAESGAVVQYQIAVTEAAHNVVLLHLLRCMEPMLAQN VRQNFELLYARREMLPLVSNHRTRIFEAIMAGEPEQAREASHRHLAFIEEILLDRSREQS RRERSLRRLQQRKDENSGS >gi|289774778|gb|GG745513.1| GENE 102 113718 - 115088 2027 456 aa, chain + ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 2 457 457 788 93.0 0 MEGQQHGDRLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFL IMRQLGEMVVEEPVAGSFSHFAYKYWGGFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW WPEIPTWASAAVFFIAINAINLTNVKVFGEMEFWFAIIKVVAVVAMILFGGWLLFSGNGG PQATVRNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV IYRILIFYVGSLAVLLSLLPWTRVTADTSPFVLIFHELGDTLVANALNVVVLTAALSVYN SCVYCNSRMLFGLAQQGNAPKALLSVDKRGVPVNTILVSALVTALCVLINYLAPESAFGL LMALVVSALVINWAMISLAHMKFRRAKQQQGVTTRFPALFYPLGNWVCLLFMAAVLVIML MTPGMAISVWLIPVWIAVLGVGYLFKQKAAATIKAQ >gi|289774778|gb|GG745513.1| GENE 103 115273 - 116679 556 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 5 447 8 521 522 218 29 2e-55 MADNRLSIKEKIGYGMGDAGCNIIFGAIMLFVNYFYTDIFGLAPALVGVLLLSVRVIDAV TDPIMGALADRTRSKYGRFRPWLLWIAFPYALFSVLMFTTPEWTYNSKVIYAFVTYFLLS VTYTAINIPYCSLGTVMTADPKERVACQSYRFVMVGIATLLLSLTLLPMADWFGGADKAK GYQMAMTVLAFIGMCMFLFCFATVRERIHPAVQTNDELKKDLKDVWKNDQWVRILLLTLC NVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVVGMMIGSMLAKVLTDRWCKLQVFFW TNIVLAIFSCAFYFFNPHATTLIMVLYFLLNILHQIPSPLHWSLMSDVDDYGEWKTGKRI TGISFSGNLFFLKVGLAVAGAMVGFLLSWYGYDAGAKAQSASALNGIVLLFSVIPGVGYL ITAGVVRLLKVDRTLMRQIQSDLEKRRSNYSELNEYQELKTSEHVRKA >gi|289774778|gb|GG745513.1| GENE 104 116679 - 117629 944 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 6 311 5 310 314 368 54 1e-100 MNNWPNPFIEQRADPFILRHLNHYYFIASVPEYDRLEIRRAATLEGLRDAEPVVVWRAPQ SGPMSQLIWAPELHEIDGKWYIYFAATHTHDLDALGMFQHRMFVLECADSDPLTGRWQEK GQVVTPFDTFALDATTFIHQGKRWYLWAQKSPHIEGNSNLYLAEMANPWTLKGEPVMLSK PEFDWECRGFKVNEGPAVLVHGDKLFISYSASATDENYCMGLLWIDRQADPLQPANWHKA PQPVFRTSYENRQYGPGHNSFTQTPAGEDVLVYHARNYTEIEGDPLYDPNRHTRLKLVSW REDGMPDFGIPPADTL >gi|289774778|gb|GG745513.1| GENE 105 117746 - 118600 1143 284 aa, chain - ## HITS:1 COG:STM0147 KEGG:ns NR:ns ## COG: STM0147 COG3725 # Protein_GI_number: 16763537 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 437 79.0 1e-122 MTLFTTLLVLIAERLFKLGEHWQLDHRLEVVFRRIKHFSLLGTLLMTVVAVAVVYLIQRL LQGQLFNVPLLVFWILLGLLCIGAGKVRLHYHAYLKAASRNDSRACDAMASELTLIHGVP PGCDEREYLSELQNALLWINYRYYLAPLFWFVVGGAWGPLTLIAYSVLRAWQTWLARYQT PHHRLQSGIDGILHIVDWLPVRLVGVVYALVGHGEKALPAWFASLGDRHSSQYQVLTRLA QYSLAREPHVDKVATPKAAVSMAKKTSLVVVVIMALLTIYGTLV >gi|289774778|gb|GG745513.1| GENE 106 118597 - 119160 441 187 aa, chain - ## HITS:1 COG:ECs0114 KEGG:ns NR:ns ## COG: ECs0114 COG3023 # Protein_GI_number: 15829368 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 187 1 183 183 330 85.0 8e-91 MQLNEGWLVGARRVPSPHHDCRPDEEAPSLLVVHNISLPPGEFGGPWIDALFTGTLDPHA HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSCYQGRERCNDFSIGIELEGT DTLAYTDAQYQQLAAVTELLITIYPAIAENIAGHSDIAPVRKTDPGPAFDWIKFRALLSA PSDKETS >gi|289774778|gb|GG745513.1| GENE 107 119294 - 120187 438 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 27 295 15 283 286 173 37 9e-42 MSPRRYNPDRRRDVLLERINLDITDAVAHSLREDLGGEVDANNDISAQLLPQDARSHAVV ITREDGVFCGKRWVEEVFIQLAGDDVNITWHVADGDAVKADQPLFELEGPSRILLTGERT ALNFVQTLSGVASVVRRYVDLLAGTKTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLF DAFLIKENHIIASGSIRQAVEKAFWLHPDVPVEVEVETLDELEQALKAGADIIMLDNFTT DLMREAVKITAGQAALEVSGNVTFDTIREFADTGVDYISVGALTKHVQALDLSMRFR >gi|289774778|gb|GG745513.1| GENE 108 120369 - 120800 671 143 aa, chain + ## HITS:1 COG:ECs0112 KEGG:ns NR:ns ## COG: ECs0112 COG4969 # Protein_GI_number: 15829366 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli O157:H7 # 1 141 1 141 146 250 87.0 5e-67 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDLLQTFVPYRTAIELCALDH GGLTVCDGGSNGIPSPTTTRYLSAMSVAKGVVTLTGQESLNGLGVTLTPTWDNAEGVTGW QRVCTITGNSALQQACEDVFRVK >gi|289774778|gb|GG745513.1| GENE 109 120811 - 122196 1463 461 aa, chain + ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 461 1 461 461 587 63.0 1e-167 MKTEQLIPLCRRYHAMLLHSDEQTISIAVVDTPPTELMEALRFATQKRIDIECWSQEQMD KRLQAQEKQAQLAQNAGPENIAERVNQILEQALRQRASDIHIEPTETHLRIRLRVDGVLH ALPLLAPELAAPIIARLKVMASLDIAEHRLPQDGQFALNLGGRPLSFRIATLPCRYGEKI VLRLLHQVDQALDLEALGLSSSQLAAFRQALNQPQGLLLVTGPTGSGKTVTLYSALQARN REQVNICSVEDPLEIPIAGMNQTQINPRSGLTFHSVLRALLRQDPDIVMVGEIRDAETAE IALKAAQTGHLVLSTLHTNSTSETLTRLQQMGIARWMISSALSLVIAQRLVRKLCPHCRR NVGSAADLPHSLWPRPLPRWQAAGCDHCYHGYHGRLALFEVMPVTPGLRQGIVQGLNAIE IESLARAAGMMTLFESGCQAIEQGLTSLEEVVRVLGIPHGD >gi|289774778|gb|GG745513.1| GENE 110 122186 - 123391 1036 401 aa, chain + ## HITS:1 COG:hofC KEGG:ns NR:ns ## COG: hofC COG1459 # Protein_GI_number: 16128099 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli K12 # 1 400 1 400 400 408 58.0 1e-114 MATKRLWRWRGIDAHGAPCQGMLWQASRLEVLHDLQQQRVMPLAVRRCAVKLNLWHPHYS SETIRQLATLLQAGLPLADGLSLLAQQQPHPQWQALLESLGRELAQGVAFTTALAQWPQA FPPLYLAMISTGELTGKLDICCQQLANQQQEQQRLAGKVKKALRYPLIVLALALLVVLGM LYFVLPEFTAIYQTFSTPLPLLTRMVVAAGDMLSRGWPLLLALFLSPLLLNQLVRRRSDW LLRRQRLLNALPLIGPLIGGQQLSLIFTILALTQSAGISFLQGLQSVEATLSCPLWRQRL AQARTLIAQGEPIWQALSRCGGFTPLCLQLIRTGESAGALDQMLENLAHHHREQTHQRAD SLAAHLEPIMLVITGSLVGILVVAMYLPVFHLGDAIGGAGG >gi|289774778|gb|GG745513.1| GENE 111 123428 - 124471 1289 347 aa, chain - ## HITS:1 COG:ECs0108 KEGG:ns NR:ns ## COG: ECs0108 COG0516 # Protein_GI_number: 15829362 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Escherichia coli O157:H7 # 1 347 1 347 347 652 93.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELEREFTFKHSGQTWSGVPIIAANMDTVGTF SMAKALATFGILTAVHKHYTVEEWQAFVQGASADVLKHVMVSTGTSDADFEKTQQILSQN PQLNFVCIDVANGYSEHFVQFVAKAREAWPQKTIIAGNVVTGEMCEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIISDGGCTMPGDVAKAFGGGADFVM LGGMLAGHEESGGTIVEENGEKFMLFYGMSSESAMTRHVGGVAKYRAAEGKTVKLPLRGP VDNTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNSL >gi|289774778|gb|GG745513.1| GENE 112 124815 - 125435 545 206 aa, chain + ## HITS:1 COG:STM0140 KEGG:ns NR:ns ## COG: STM0140 COG0237 # Protein_GI_number: 16763530 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Salmonella typhimurium LT2 # 1 204 1 204 206 281 77.0 8e-76 MGYTVALTGGIGSGKSTVADAFAQLGVNVVDADVIARQVVEPGTPALQAIAGHFGSQMIA PDGTLNRRLLREKIFAHVEDKAWLNALLHPLIQQETRRQMQAATSPYLLWVVPLLVENRL SGQADRVLVVDVPKETQIERTMLRDKVSREHAEHILAAQATREQRLAVADDVIENTGTPD AVASDVARLHEKYLMLASQAASQENS >gi|289774778|gb|GG745513.1| GENE 113 125435 - 126178 1012 247 aa, chain + ## HITS:1 COG:STM0139 KEGG:ns NR:ns ## COG: STM0139 COG4582 # Protein_GI_number: 16763529 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 247 1 247 247 393 80.0 1e-109 MHTPVLFEHPLNEKMRTWLRIEFLIQQMAFHPMIATHADALHFFRNAGDLLDVLERGEVR TDLVKELERQQRKLQSWAEVPGVDQERINELRQQLKQSSSTLMAAPRIGQFLREDRLIAL VRQRLSIPGGCCSFDLPTLHIWLHMPQAHRDEQVASWLASLDPLIQSLNLILDLIRNSAL FRKQTSLNGFYQDNGEDADLLRLRLDLAHQLYPQISGHKSRFAIRFLPLDSEYGIVPERF DFELACC >gi|289774778|gb|GG745513.1| GENE 114 126188 - 126382 241 64 aa, chain + ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 62 1 62 65 101 87.0 4e-22 MSEETIVNCPTCGKNVVWGEQSPFRPFCSKRCQLIDLGEWAAEEKRIPSAGDLSDSDDWS EQQP >gi|289774778|gb|GG745513.1| GENE 115 126435 - 126827 345 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 2 127 4 129 136 137 48 6e-31 MKKLQIAVGIIRNPQGEIFITQRAADAHMANKLEFPGGKIESDETPEQALIRELQEEVGI TVRSATLFDKLEYQFPDRHITLWFFLVERWQGEPWGKEGQPGRWMAGQTLDPEAFPPANE PVINKLIGLG >gi|289774778|gb|GG745513.1| GENE 116 126885 - 129590 3815 901 aa, chain - ## HITS:1 COG:ECs0102 KEGG:ns NR:ns ## COG: ECs0102 COG0653 # Protein_GI_number: 15829356 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Escherichia coli O157:H7 # 1 900 1 900 901 1642 94.0 0 MLIKMLTKVFGSRNDRTLRRMRKVVNIINGMEPAMEKLSDDELKAKTAEFRARLEKGEVL ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINMSGLPAPAKREAYAADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYRKVN KIIPHLIRQEKEDSDTFTGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMEEGESLYS PTNIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR KDMADLVYMTEAEKIQAIIEDIKTRTAAGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN AKFHASEADIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALENPTPEQIEKIKAD WQVRHDAVLAAGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY TQRNELLDVSDVSETINSIREDVFKATIDAHIPPQSLEEMWDIEGLQERLKNDFDLELPI KEWLDKEPELHEETLRERILQSAVETYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEAM EQQRREEAERLAQMQQLSHQSDDEAAAEDLAAQTGERKVGRNDPCPCGSGKKYKQCHGRL S >gi|289774778|gb|GG745513.1| GENE 117 129653 - 130081 329 142 aa, chain - ## HITS:1 COG:no KEGG:KPK_4640 NR:ns ## KEGG: KPK_4640 # Name: secM # Def: SecA regulator SecM # Organism: K.pneumoniae_342 # Pathway: Protein export [PATH:kpe03060]; Bacterial secretion system [PATH:kpe03070] # 1 142 64 205 205 252 100.0 4e-66 MVAASFGLPALSNSHETATPAKATSSNHNPSKVNFSQLALLESNRRPNFTVDYWHQHAIR TVIRHLSFAMAPQALPVAEETSPLQAQHLALLDTLSALLTQDSTPPVVIRQVAYISSSYS AFRVSAWISQVAGIRAGPQRLS >gi|289774778|gb|GG745513.1| GENE 118 130474 - 131391 830 305 aa, chain - ## HITS:1 COG:ECs0100 KEGG:ns NR:ns ## COG: ECs0100 COG0774 # Protein_GI_number: 15829354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 620 96.0 1e-177 MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFVYLLLDAGI DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDASTQRYTLNFSAD AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFEDDAKLPMAFRAP SMVLA >gi|289774778|gb|GG745513.1| GENE 119 131492 - 132643 1414 383 aa, chain - ## HITS:1 COG:ECs0099 KEGG:ns NR:ns ## COG: ECs0099 COG0206 # Protein_GI_number: 15829353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 635 98.0 0 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GSGITKGLGAGANPEVGRNAADEDREALRAALDGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP DMNDELRVTVVATGIGMDKRPEITLVTNKQVQQPVMDRYQQHGMSPLTQEQKPAAKVVND NTPQTAKEPDYLDIPAFLRKQAD >gi|289774778|gb|GG745513.1| GENE 120 132706 - 133968 1257 420 aa, chain - ## HITS:1 COG:ECs0098 KEGG:ns NR:ns ## COG: ECs0098 COG0849 # Protein_GI_number: 15829352 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 808 98.0 0 MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMINIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTLDDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLAASYSVLTEDERELGVCVVDIGGGTMDIAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDENVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGA PLNITGLTDYAQEPYYSTAVGLLHYGKESHLSGEAEVEKRVTASVGSWIKRLNSWLRKEF >gi|289774778|gb|GG745513.1| GENE 121 133965 - 134795 611 276 aa, chain - ## HITS:1 COG:STM0131 KEGG:ns NR:ns ## COG: STM0131 COG1589 # Protein_GI_number: 16763521 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Salmonella typhimurium LT2 # 1 264 1 264 276 467 88.0 1e-131 MSQAALNTRNHEEDVSSSRRSNGTRLAGIVFLLAVLFTVLVSGWMVLGWMEDAQRLPLSK MVVTGERHYTRNDDIRQAILALGSPGTFMTQDVNIIQSQIERLPWIKQASVRKQWPDELK IHLVEYVPIARWNDQHMVDAEGNAFSVPADRTSKQNLPMLYGPEGSENEVLQGYRDMGQV LAKDKFTLKVAAMTARRSWQLTLNNDIKLNLGRGDTMKRLQRFMELYPVLQQQAQTDGKR ISYVDLRYDSGAAVGWVPAPVEETNQQQNQAQAEQQ >gi|289774778|gb|GG745513.1| GENE 122 134797 - 135717 980 306 aa, chain - ## HITS:1 COG:ddlB KEGG:ns NR:ns ## COG: ddlB COG1181 # Protein_GI_number: 16128085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli K12 # 1 305 1 305 306 493 81.0 1e-139 MADKIAVLFGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPRDIDITQLKNLGFKKAFI ALHGRGGEDGTLQGLLDLIQLPYTGSGVMASALSMDKLRSKWLWQGAGLPVAPWVALTRA QFTAGLSAAVEQQIAALGLPVIIKPSREGSSVGMSKVSESCDLPSALALAFQHDDEVLVE KWLSGPEFTVAIVGEEILPSIRIQAAGTFYDYEAKYLSDETQYFCPGFEDPARESDIQSL VLKAWNVLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR ILDLAG >gi|289774778|gb|GG745513.1| GENE 123 135710 - 137185 1722 491 aa, chain - ## HITS:1 COG:ECs0095 KEGG:ns NR:ns ## COG: ECs0095 COG0773 # Protein_GI_number: 15829349 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 # 1 490 1 490 491 843 93.0 0 MNTQDLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQL SQLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRH GIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHSRYLIAEADESDA SFLHLQPMVAIVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELL PRVGRQITTYGFSDDADVRVEDYRQLGAQGHFRLVRQDKEILQVTLNAPGRHNALNAAAA VAVATEEGIDDQAILRALESFQGTGRRFDFLGEFPLAEVNGKPGSAMLIDDYGHHPTEVD ATIKAARAGWPDKNLVMLFQPHRYTRTRDLYDDFANVLTQVDALLMLDVYPAGEAPIPGA DSRSLCRTIRGRGKVDPILVSDPAQAAEMLASVLTGNDLVLVQGAGNIGKIARHLAEIKL APQKTEEERHG >gi|289774778|gb|GG745513.1| GENE 124 137234 - 138304 1018 356 aa, chain - ## HITS:1 COG:murG KEGG:ns NR:ns ## COG: murG COG0707 # Protein_GI_number: 16128083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Escherichia coli K12 # 1 355 1 355 355 599 89.0 1e-171 MSGQEKRLMVMAGGTGGHVFPGLAVAHHLMDQGWQVRWLGTADRMEADLVPKNGIEIDFI RISGLRGKGIKAQLLAPVRIFNAWRQARAIMKRFQPDVVLGMGGYVSGPGGLAAWSLGIP VVLHEQNGIAGLTNKWLAKIAKKVMQAFPGAFPHADVVGNPVRTDVLALPLPGQRLVGRH GPIRVLVVGGSQGARVLNQTMPQVAAKLGDAVTIWHQSGKGGQQTVQQAYAAAGQPQHKV TEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGA AKILEQPEFTVEAVASTLASWDRETLLDMAERARGASIPDATERVAEEVSAVALAR >gi|289774778|gb|GG745513.1| GENE 125 138301 - 139575 1694 424 aa, chain - ## HITS:1 COG:STM0127 KEGG:ns NR:ns ## COG: STM0127 COG0772 # Protein_GI_number: 16763517 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Salmonella typhimurium LT2 # 12 424 2 414 414 692 92.0 0 MRFSLPRLRMPQLSLPRLRLPRLPGMFIFAWLFAALKGWVMGSRPKDNDSLVMYDRMLLW LTFGLAAIGFIMVTSASMPVGQRLANDPFLFAKRDGLYIVLAFVLALVTLRLPMDFWQRH STAMLIASIVMLLIVLVVGSSVNGASRWIALGPLRIQPAEFTKLSLFCYIANYLVRKADE VRNNLRGFLKPMGVIFVLAILLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGI SAVVLLILAEPYRIRRVTSFWNPWEDPFGSGYQLTQSLMAFGRGEMWGQGLGNSVQKLEY LPEAHTDFIFAIIGEELGYIGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACAIGI WFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMLLLRIDYETRLEKAQAFT RGVR >gi|289774778|gb|GG745513.1| GENE 126 139575 - 140891 1427 438 aa, chain - ## HITS:1 COG:STM0126 KEGG:ns NR:ns ## COG: STM0126 COG0771 # Protein_GI_number: 16763516 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 770 89.0 0 MADYQGKKVVIIGLGMTGLSCVDFFMARGVTPRVMDTRVAPPGLDKLPESVECHVGGLND TWLLAADLIVASPGIALAHPSLSAAADAGVEIVGDIELFCREAQAPIIAITGSNGKSTVT TLVGEMAKAAGVNVGVGGNIGLPALMLLDTDRELYVLELSSFQLETTSSLQAVAATILNV TEDHMDRYPLGLQQYRAAKLRIYENAKTCVVNADDALTMPVRGADDRCISFGVDVGDYHL NRQQGETWLRVKGEKVLNVKEMPLTGQHNYSNALAALALADAAGLPRASSLKALTTFTGL AHRFQLVLDHNGVRWINDSKATNVGSTEAALNGLQLDGTLYLLLGGDGKSADFTPLKRYL GGDRIRLYCFGRDGAELAELRPDVAVQTETMEQAMRQIAPLVKAGDMVLLSPACASLDQF KNFEQRGDMFARLAKELG >gi|289774778|gb|GG745513.1| GENE 127 140894 - 141976 1674 360 aa, chain - ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 644 97.0 0 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIARLQKLSFGQVVRND GPESHFSKRGTPTMGGIMILTAITVSVLLWAYPSNPYVWCVLTVLIGYGIIGFVDDYRKV VRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATELVVPFFKDVMPQLGLLYILLA YFVIVGTGNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNMNFANYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVE TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|289774778|gb|GG745513.1| GENE 128 141970 - 143328 1535 452 aa, chain - ## HITS:1 COG:murF KEGG:ns NR:ns ## COG: murF COG0770 # Protein_GI_number: 16128079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Escherichia coli K12 # 1 452 1 452 452 696 84.0 0 MIRFTLSQLAAIAHGERQGSDIAIDEVTSDTRKVTAGCLFVALKGERFDAHDFAEQAKAA GAGALLVSRPLACDLPQVIVKDTRQAFGELAAWVRQQVPTRVVALTGSSGKTSVKEMTAA ILSQCGNTLYTAGNLNNDIGVPMTLLRLTKEHQYAVIELGANHQGEIAWTVSLTRPEAAL VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAILNADNNDWLNWQAVIGDRKVWRFS PNAANSDFTATNVQITSHGTEFTLQTPTGNVDVLLPLPGRHNIANALAATSLAMAVGADL AAVKAGLAQLKAVPGRLFPIRLTESQLLLDDSYNANVGSMTAAVQVLSEMPGFRAMVVGD MAELGAESAACHREVGEVAKAAGLDCVLSVGTLSADISRASGVGEHFNDKAAVVARLREL LAEHKIMTILVKGSRSAAMEEVVRALQETGTC >gi|289774778|gb|GG745513.1| GENE 129 143325 - 144812 1795 495 aa, chain - ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 495 1 495 495 868 92.0 0 MADRNLRDLLAPWVPNAPERILREMTLDSRVAASGDLFIAVQGHQADGRRYIPQAIAQGV AAIIAEAQGEAEDGEIREMHGVPVIYLSQLNERLSALAGRFYHQPSQQLRLVGVTGTNGK TTTTQLLAQWAKLLGETSAVMGTVGNGLLDKVVPTENTTGSAVDVQHVLSSLVGQGATFG AMEVSSHGLVQHRVAALQFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSTHHCGQAIVN ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATAVNYHDSGATIQFDSSWGNGEIE SRLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFSAPGKPAVVVDYAH TPDALEKALQAARLHCSGKLWCVFGCGGDRDKGKRPLMGAIAEEFADIVVVTDDNPRTEE PRAIINDILAGMLDAGHAKVMEGRAEAVTNAVMQAKENDVVLVAGKGHEDYQIVGNRRLD YSDRVTVARLLGAVA >gi|289774778|gb|GG745513.1| GENE 130 144799 - 146565 1644 588 aa, chain - ## HITS:1 COG:STM0122 KEGG:ns NR:ns ## COG: STM0122 COG0768 # Protein_GI_number: 16763512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 1 588 1 588 588 1110 94.0 0 MKAAPKTPKAKRQEEQANFISWRFALLCGCILLALTFLLGRVAWLQVVSPDMLVRQGDMR SLRVQEVSTARGMITDRSGRPLAVSVPVKAIWADPKELHDAGGVTLDTRWKALADALNMP LDQLATRINTNPRMRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIG FTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERL QALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNFAGTAKDTMRNRAIT DVFEPGSTVKPMVVMTALQRGIVNENTVLNTIPYRINGHEIKDVARYSELTLTGVLQKSS NVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYG LMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESLVRTVVHMMESVALPGGG GVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASHPRFALVVVINDPQAGKY YGGAVSAPVFGAIMGGVLRTMNIEPDALATGEKSEFVINQGEGTGGRS >gi|289774778|gb|GG745513.1| GENE 131 146581 - 146946 331 121 aa, chain - ## HITS:1 COG:STM0121 KEGG:ns NR:ns ## COG: STM0121 COG3116 # Protein_GI_number: 16763511 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 121 1 121 121 223 97.0 1e-58 MIGRVTEALSKVKGSIGSNERHALPGVIGDDLLRFGKLPLCLFICIIITAITVVTTAHHT RLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQ K >gi|289774778|gb|GG745513.1| GENE 132 146943 - 147881 856 312 aa, chain - ## HITS:1 COG:STM0120 KEGG:ns NR:ns ## COG: STM0120 COG0275 # Protein_GI_number: 16763510 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Salmonella typhimurium LT2 # 1 312 2 313 313 561 94.0 1e-160 MENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSRLGAEGRLLAIDRDPQAI AVAKTIDDPRFSIVHGPFSQLADYVDERNLTGKIDGILLDLGVSSPQLDDAERGFSFMRD GPLDMRMDPTRGQSAAEWLQTAEEADIAWVIKTFGEERFGKRIARAIVERNRIEPMTRTK ELAEVIAAAMPVKDKHKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISF HSLEDRIVKRFMREQSRGPQVPAGIPMTEAQLKKLGGRELRALGKLMPGEEEVAENPRAR SSVLRIAERTNA >gi|289774778|gb|GG745513.1| GENE 133 147887 - 148345 187 152 aa, chain - ## HITS:1 COG:ECs0085 KEGG:ns NR:ns ## COG: ECs0085 COG2001 # Protein_GI_number: 15829339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 282 92.0 2e-76 MFRGATLVNLDSKGRLAVPTRYRDGLIEDAAGQLVCTIDIHHPCLLLYPLPEWEIIEQKL SRLSSMNPVERRVQRLLLGHASECQMDNAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW DETTWYQRVKEDIDAEQSATGELSERLQDLSL >gi|289774778|gb|GG745513.1| GENE 134 148986 - 149990 1032 334 aa, chain - ## HITS:1 COG:ECs0084 KEGG:ns NR:ns ## COG: ECs0084 COG1609 # Protein_GI_number: 15829338 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 333 1 333 334 630 96.0 0 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAAELRTFPGE TVLYLGALPELSVSFLREQGFRKAWQDDPREVHYLYANSYEREAAAQLFEKWLETHPMPQ ALFTTSFPLLQGVMDVTLRREGKLPSELAIATFGDNELLDFLQCPVLAVAQRHRDVAERV LEIVLASLDEPRKPKPGLSRIRRNLYRRGSLNRR >gi|289774778|gb|GG745513.1| GENE 135 150171 - 150662 541 163 aa, chain - ## HITS:1 COG:STM0117 KEGG:ns NR:ns ## COG: STM0117 COG0440 # Protein_GI_number: 16763507 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Salmonella typhimurium LT2 # 1 163 1 163 163 277 96.0 6e-75 MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKAIEQI EKQLHKLVDVLRVSELGQGAHVEREIMLVKVQASGYGREEVKRNTEIFRGQIIDVTPSIY TVQLAGTSDKLDAFLASLRDVARIVEVARSGVVGLSRGDKIMR >gi|289774778|gb|GG745513.1| GENE 136 150665 - 152389 2136 574 aa, chain - ## HITS:1 COG:ZilvI KEGG:ns NR:ns ## COG: ZilvI COG0028 # Protein_GI_number: 15799761 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 EDL933 # 1 574 29 602 602 1082 91.0 0 MEMLSGAEMVVQSLVDQGVKQVFGYPGGAVLDIYDALHTLGGIDHVLVRHEQAAVHMADG LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVILSGQVATSLIGYDAFQECDMVG ISRPVVKHSFLVKQTEDIPGVLKKAFWLAASGRPGPVVVDLPKDILNPAKKLPYAWPEAV SMRSYNPTTSGHKGQIKRALQTLVAASKPVVYVGGGAINAHCEPQLRELVEKLKLPVASS LMGLGAFPATHPQALGMLGMHGTYEANMTMHHSDVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVPADVPIVGDARLVLEQMLELLDQEETQQPLDDIRDWWQQIEQWRAR HCLRYDDQSDKIKPQAVIETIWRLTQGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKMALPDEMVVCVTGDGSIQMNIQELSTALQYELPVLVLNLNNRYLGM VKQWQDMLYSGRHSQSYMESLPDFVRLAEAYGHVGIRISEPQELESKLAEALEQVRQRRL VFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT >gi|289774778|gb|GG745513.1| GENE 137 152784 - 153752 901 322 aa, chain - ## HITS:1 COG:STM0115 KEGG:ns NR:ns ## COG: STM0115 COG0583 # Protein_GI_number: 16763505 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 24 322 16 314 314 538 85.0 1e-153 MTAELDMLIDTPEYKSAPGQEVVKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPA VSNAVSRLKVMFNDELFVRYGRGIQPTARAYQLFGSVRQALQLVQNELPGSGFEPLSSER VFHLCVCSPLDNILTSVIFNKVAEIAPNIHLVFKSALNQNTEHQLRYQETEFVIGYEEFR RPEFACVPLFKDEMVLVASRNHPRISGPVMEADIYREEHATVALDRYASFSLPWYDTADK QARIAYQGNAMVSVLNVVSQTQMVAIAPRWLANEFADKLALQILPLPLKVNSRTCYLSWH EAAGRDKGHQWMEELLVDICKR >gi|289774778|gb|GG745513.1| GENE 138 154547 - 156118 1907 523 aa, chain + ## HITS:1 COG:STM0113 KEGG:ns NR:ns ## COG: STM0113 COG0119 # Protein_GI_number: 16763503 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Salmonella typhimurium LT2 # 1 523 1 523 523 968 93.0 0 MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQS IARTIKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIE RAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEY ANIISGLYDRVPNIDKAIISVHTHDDLGIAVGNALAAVHAGARQVEGAMNGIGERAGNCA LEEVIMAIKVRKDIMNVHTNINHHEIWRTSQTVSQICNMPIPANKAIVGTGAFAHSSGIH QDGVLKNRENYEIMTPESIGLNQVQLNLTSRSGRAAVKHRMEEMGYQESDYNLDHLYDAF LKLADKKGQVFDYDLEALAFINKQQEEPEHFRLDYFSVQSGSSDIATASIKLVCGDEIKT EAANGNGPVDAIYQAINRVTNYNIDLVKYGLSAKGHGKDALGQVDIVVDYNGRRFHGVGL ATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQNKENNKETV >gi|289774778|gb|GG745513.1| GENE 139 156118 - 157209 1453 363 aa, chain + ## HITS:1 COG:leuB KEGG:ns NR:ns ## COG: leuB COG0473 # Protein_GI_number: 16128067 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 363 2 364 364 691 93.0 0 MSKNYHIAVLPGDGIGPEVMNQAMKVLEAVRQRFAMHITTSQYDVGGAAIDRQGTPLPQA TVAGCEQADAILFGSVGGPKWEHLPPAEQPERGALLPLRKHFKLFSNLRPAKLYQGLEEF CPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQHEKAFDTEVYHRFEIERIARIAF ESARKRRHKVTSIDKANVLQSSILWREIVTEIGKEYPDVELAHMYIDNATMQLIKDPSQF DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIA QILSLALLLRYSLDADEAATAIESAINRALEEGVRTGDLARGTAAVSTDEMGDIIARYVA EGV >gi|289774778|gb|GG745513.1| GENE 140 157212 - 158612 1782 466 aa, chain + ## HITS:1 COG:leuC KEGG:ns NR:ns ## COG: leuC COG0065 # Protein_GI_number: 16128066 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Escherichia coli K12 # 1 466 1 466 466 902 96.0 0 MAKTLYEKLFDAHVVYEAQNETPLLYIDRHLVHEVTSPQAFDGLRAHGRQVRQPGKTFAT MDHNVSTQTKDINASGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLP GMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIDVQGKAAPGITA KDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTF NYVRGRLHAPKGKDFDDAVAYWKTLKTDDGATFDTVVTLQAAEIAPQVTWGTNPGQVISV TDNIPDPASFSDPVERASAEKALAYMGLKSGIPLTDVAIDKVFIGSCTNSRIEDLRAAAE IAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNLK >gi|289774778|gb|GG745513.1| GENE 141 158623 - 159228 923 201 aa, chain + ## HITS:1 COG:STM0110 KEGG:ns NR:ns ## COG: STM0110 COG0066 # Protein_GI_number: 16763500 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Salmonella typhimurium LT2 # 1 200 1 200 201 385 92.0 1e-107 MAEKFTQHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDDKGQQPNPD FVLNFPQYKGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLL PVTLSDEQVDELFKLVQANPGMTFEVDLEAQVVKAGDKTYSFKIDDFRRHCMLNGLDSIG LTLQHGEAISDYERKLPAFMN >gi|289774778|gb|GG745513.1| GENE 142 159626 - 161659 1895 677 aa, chain + ## HITS:1 COG:lin0492_1 KEGG:ns NR:ns ## COG: lin0492_1 COG1902 # Protein_GI_number: 16799567 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 1 364 1 364 364 556 68.0 1e-158 MSHYPHLFSPLTINGMTLKNRIIMPPMGTNMATLNGEVSQEQLEYYELRAKGGTGLITIE NICIDFPFASNGTTQLRIDNDQYIPRLFKLTETLHKHGACVSIQLNHAGASAYAYRLDGQ TPLSSSTTPSKKHGNIPRPMTHEEIYHAVEKFGDAAERVRRAGFDSVEIHAGHSYLISQF LSPLFNKRTDEFGGSVENRTRILSLIIDKVRACVGPRFPVSLRISADDFLKGGNTLEDSL RILELCQDKVDIINVSAAQNDNLNLQIDQMSLEDGWKRYLSRAVRDKFHKPTVIAGNIRS PQVAEDILASGDADLIAIGRGLIAEPEWVQKVQGGKERLMRKCISCNIGCADHRIARSRP LRCSINPDIIHGDAYKMRRVSRETNVVVIGAGTAGMEAACTAAEVGCHTWLLEAKNHVGG LASDISRLPEKKRIADFPQFMKNRIASLDNLMLQVGKRADVASVSALHPHLIVNATGSTP LLPPIEGLRENIDTADGKVFSITGMIDNLAKFTNIEGKRIAVVGAGAVGLDVIEYFTARG AQAVLIEMQDAAGRDLDIITKNAMLTMLDEHQVEQHMNTQLMAVAADHFRVKNTQQTFDI PFDYGFVCLGMRANRTGLDEIERWANANNVKIMNIGDSLMARRIIDGIREGRNVLDTLED MGALGSREAQRIPFLTY >gi|289774778|gb|GG745513.1| GENE 143 161671 - 162534 1166 287 aa, chain + ## HITS:1 COG:lin0493 KEGG:ns NR:ns ## COG: lin0493 COG0169 # Protein_GI_number: 16799568 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Listeria innocua # 1 287 5 291 291 486 80.0 1e-137 MAERITGHTELIGLIATPIRHSMSPTMHNEAFAHLGLDYVYLAFEVGNQELKDVVQGFRA MKLRGFNVSMPNKTEICQYLDKLSPAAQLVGAVNTVVNDDGVLTGHITDGTGYMRALSEA GIDIIGKKMTVLGAGGAATALCVQAALDGVKAISIFNRRDKFFANAEETVAKIRNNTNCE IHLFDLDDHDKLRAEIDSSVILTNATGVGMKPFEGQMLLPNDSFLRPDLIVSDVVYNPRK THLLEVAEKKGCRTLNGLGMMLWQGARAFEIWTGKQMPVDYIKSILF >gi|289774778|gb|GG745513.1| GENE 144 162545 - 163759 1695 404 aa, chain + ## HITS:1 COG:STM1361 KEGG:ns NR:ns ## COG: STM1361 COG0477 # Protein_GI_number: 16764712 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 387 1 387 403 429 60.0 1e-120 MKNKYIPTAAGLYLNYLIHGMGVLLITLNMAHLQEQWGTDAAGVSIVISSLGIGKLATIV TGFLSDRFGRKPFIYLGILSYLIFFVGILLTKNIYLAYVFGIMAGLANSFLDSGTYPALM ESFPHSASRANVLIKAFVSAGQFLLPFIISFLIWANLWFGWSFVIAAGLFVLSGIYLLKM PFPDSQSAKKEEAPTAQAEATARPQANKLDMVIFTLYGYIGMATFYLVSQWLAQYGQFVV GLPYASAIKLLSIYTVGSLVCVFVTAAFVKEVFSSAIAMIIYTGLSMISLLLVCLFPTPM MVTGFAFIIGFAAAGGVLQLGATIMAMSFPNGKGKATGIFYTAGSIASFTIPLITAKLSQ ISIASIMWFDFAIAVIGFVIALYIGYRQLQARAAQKVSRTAVTA >gi|289774778|gb|GG745513.1| GENE 145 163790 - 164545 846 251 aa, chain + ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 3 250 2 248 252 271 56.0 8e-73 MTNAVTVKNITFQEGETLICVPLIGKTLDEILGNAHGLVDAGADIIEWRVDHFTQVRDMT QVMAALAEIRGSLKALPLLFTFRSKKEGGETEISDEAYFALNREAARSGLVDVIDIELFN DEAQIRALVDDAHAAGVKVIMSNHDFHKTPAQEDIIYRLRRMQDLGADLPKIAVMPQSPQ DVLTLLAATLTMKEKYATRPLITMSMGKSGGVSRVTGRLFGSAMTFGTVGQASAPGQIAI AKLREVMDILS >gi|289774778|gb|GG745513.1| GENE 146 164583 - 165479 928 298 aa, chain - ## HITS:1 COG:lin0491 KEGG:ns NR:ns ## COG: lin0491 COG0583 # Protein_GI_number: 16799566 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 291 1 289 297 313 51.0 3e-85 MNLKQLYYFKRLSETEHYTEAASSLCITQPSLSHAISELEKELGVALFARQGRNVKITQN GKRFLPYVEDALASLENGRMTLQKNGAENKENIRIAFIYTMGEYVVPQLINQYSLSPECH NVTFSFTQGTSLTLLQELKAGKVDLAICSYIADEPDIDFIPVIQQELVVVTAKDHPLARL YEHEVDLVETIHYPYIYFSDNSGLHPFIDNVFMQQKLVPEIACYVDEDTAMAGLVSIDYG IAIMPRISALSYYNVHILKIKNTIPPRYIYLATMKDRLLSPALQSFKNVVIHDSQNLC >gi|289774778|gb|GG745513.1| GENE 147 165711 - 167021 958 436 aa, chain + ## HITS:1 COG:STM3827 KEGG:ns NR:ns ## COG: STM3827 COG0477 # Protein_GI_number: 16767112 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 7 433 13 444 445 348 43.0 9e-96 MSMSNSQEVLTSSSGTKKRSRVRIVILLLLSVGTMINYLDRTILGIVAPQLTQEIHIDPA MMGIIFSAFAWTYALAQIPGGVFLDRFGNKLTYALSIFFWSLFTLLQSFTLGLKTLLLLR LGLGVSEAPCFPANSRIVSTWFPQHERARATATYTVGEYIGLAAFSPLLFLILEHHGWRT LFFLTGGLGILFTLVWWRFYHEPHESRIANKAELDYIGVNSINNKIQNVPFNWRDARRLL GCRQIVGASLGQFAGNTTLVFFLTWFPSYLANERHLPWLHVGFFATWPFLAAAIGILFGG WISDRLLKRTGSVNISRKLPIISGLLLSSCIIAANWVSANSTVIIIMSVAFFGQGMVGLG WTLISDIAPENMAGLTGGIFNFCANMASIIAPLIIGVIISATGNFFYALIYVGLTALIGV IAYIFIIGDIKRIVLE >gi|289774778|gb|GG745513.1| GENE 148 167066 - 168250 1547 394 aa, chain - ## HITS:1 COG:setA KEGG:ns NR:ns ## COG: setA COG0477 # Protein_GI_number: 16128064 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 394 1 392 392 581 84.0 1e-166 MLWLMTMGRRLNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWVGLFYTVNAI AGILVSLALAKRSDSRGDRRRLIMLCCLMAVGNALLFAFNRHYLTLITCGVMLASIANAA MPQLFALAREYADSSAREVVMFSSIMRAQLSLAWVIGPPLAFMLALNYGFTTMFSIAAGI FVISLALIAIKLPSVPRVEQPSEEAAALVQAGGWQDKNVRMLFIASTLMWTCNTMYIIDM PLWISNDLGLPDSLAGILMGTAAGLEIPAMILAGYYVKRFGKRKMMVAAVAAGVLFYAGL ILFHGRTALLALQLFNAVFIGIIAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVM QGALSQSYGHASVYWTIAAISLVTLFLTSRVKDI >gi|289774778|gb|GG745513.1| GENE 149 168522 - 168671 128 49 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4314 NR:ns ## KEGG: Kvar_4314 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 49 2 50 50 76 100.0 3e-13 MRSTAKSFYQRYFSATQDASWLARLMAGRQQEILGELMQWGVTSKASDH >gi|289774778|gb|GG745513.1| GENE 150 168762 - 170417 1990 551 aa, chain + ## HITS:1 COG:ECs0074 KEGG:ns NR:ns ## COG: ECs0074 COG4533 # Protein_GI_number: 15829328 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 551 1 551 552 900 78.0 0 MSSSRLQQQFIRLWQCCDGKSQETTLNELAEMLSCSRRHMRTLLNMMESRGWLAWEAEAG RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAAVRQMLISHLGRSFRQGRH ILRVLYYRPMKNLLPGSALRRSETHIARQIFSALTRVNEENGELEADIAHHWQQLTPTHW RFFLRPGIHFHHGRELEMADVIASLQRSNALPLYSHIERIESPTAWTLDIHLRQPDRWLP WLLGQVPAMVLPQEWQTMNHFSSMPVGTGPYAVVRNNQNQLKIHAFEDYFGYRALIDEVN VWVLPEISEEPNGGLTLQGNTESEKAVESRLEEGCYYLLFDSRSPLGANDAVRRWLSYLF QPANLLYHAGEHYQGNWFPAYGLLPRWHHASNHACEKPAGLETVTLTYYRDHVEHRVIGG IMRDLLAAHQVKLEIQELEYDAWHRGEVVSDIWLNSVNFTLPIEFSLFAYLYEVPLIQRC IPIDWQADACRWRAGEFNPATWSQRLLAGQHIVPLIHHWLMIQGQRSMRGVRMNTLGWFD FKSAWFAPPEP >gi|289774778|gb|GG745513.1| GENE 151 170710 - 171690 1367 326 aa, chain + ## HITS:1 COG:STM0108 KEGG:ns NR:ns ## COG: STM0108 COG4143 # Protein_GI_number: 16763498 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 18 326 19 327 327 540 88.0 1e-153 MKKLLPLLALVAMPALAKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGV SLLNRLRMEGKNSKADIVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYD YGYFAFVYDKNKLANPPKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPE AWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFVEGHY LQVEVAARTAASKQPALAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQT TLAFTPQQVASERQTWISAWQRAVSR >gi|289774778|gb|GG745513.1| GENE 152 171666 - 173276 2030 536 aa, chain + ## HITS:1 COG:STM0107 KEGG:ns NR:ns ## COG: STM0107 COG1178 # Protein_GI_number: 16763497 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 535 1 535 536 751 82.0 0 MATRRQPLNLRGLLPGLFAATLLCAVALAAFLALWFSAPGAGWQSVFSDSYLWHVVRFSF WQASLSALFSVGPAIFLARALYRRRFPGRTLLLRLCAMTLILPVLVAVFGILSVYGRQGW LASLFHALGWQWDFSPYGLQGILLAHVFFNMPMATRLLLQALESIPGEQRQIAAQLGMRG YAFFRLVEWPWMRRHIPAVAALIFMLCFASFATVLSLGGGPKATTIELAIYQALSFDYDP ARAAMLALIQMLCCLALVLLSQRLSKAVAIGVSHVRGWRDPDDRLHSRLSDGLLIGAALL LLLPPLLAVIVDGINRNMLNVLAQPALWQALSTSLRIAIAAGLLSVTLTMMLLWSSRELR ARQRPLAGQAMELSGMLILAMPGIVLATGFFLLLSNSVGLPESADGIVIFTNALMAIPYA LKVLENPMRDVTARYSMLCQSLGIEGFTRLRVVELRALRRPLAQALAFACVLSIGDFGVV ALFGNEAFRTLPFYLYQQIGAYRSQDGAVTALLLLLLCFLLFTLIEKLPGRDAKTQ >gi|289774778|gb|GG745513.1| GENE 153 173260 - 173961 286 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 217 22 226 245 114 35 4e-24 MLKLNDVTWLYQHLPMRFTLDVARGERIAVLGPSGAGKSTLLNLIAGFLPPASGSLRING EVHNATPPAQRPVSMLFQENNLFNHLTVRQNISLGIHPGLKLSREEQAQVAAMAGQMGID ALLERLPGELSGGQRQRAALARCLVRQQPVLLLDEPFSALDPALRQEMLSLVADVCEQQQ LTLLMVSHSVEDAARIAPRSIVVAEGRIVWDGATAELLSGNSSASHLMGISAQ >gi|289774778|gb|GG745513.1| GENE 154 173948 - 174715 1009 255 aa, chain - ## HITS:1 COG:ECs0069 KEGG:ns NR:ns ## COG: ECs0069 COG0586 # Protein_GI_number: 15829323 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 254 1 253 254 368 79.0 1e-102 MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGSGEVNFWQAW LAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVG PTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWL LLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVVVAATALTLVCRHP LMPVYLAILHKVIAR >gi|289774778|gb|GG745513.1| GENE 155 174844 - 175689 973 281 aa, chain - ## HITS:1 COG:STM0104 KEGG:ns NR:ns ## COG: STM0104 COG2207 # Protein_GI_number: 16763494 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 556 92.0 1e-158 MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNH GEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFF RPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVR DACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGISVLGWREDQRISQAKLLLS TTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE >gi|289774778|gb|GG745513.1| GENE 156 176026 - 177735 1838 569 aa, chain + ## HITS:1 COG:ECs0067 KEGG:ns NR:ns ## COG: ECs0067 COG1069 # Protein_GI_number: 15829321 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Escherichia coli O157:H7 # 1 554 1 554 566 981 87.0 0 MAIAIGLDFGSDSVRALAVECASGAELAASVEWYPRWREGQYCDGANNRFRHHPRDYIES MEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGSVLALREEFADNPNAMFVLWK DHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVEL CDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFT DTWTADVPVGTLSAEWAQRLGLSQTVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI LIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQ PALREQIKASQKQLLPALTEAWANNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA TDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPL QIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQ QWSVSAEQHYLPSAAKAEKAPQSQAALTH >gi|289774778|gb|GG745513.1| GENE 157 177746 - 179248 1949 500 aa, chain + ## HITS:1 COG:araA KEGG:ns NR:ns ## COG: araA COG2160 # Protein_GI_number: 16128056 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Escherichia coli K12 # 1 500 1 500 500 984 91.0 0 MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEI THICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDF MNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCR FGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLT PAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQG YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIAT AEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLP KLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHNIELTVIDNDT RLPSFKDALRWNEVYYGSKR >gi|289774778|gb|GG745513.1| GENE 158 179387 - 180082 958 231 aa, chain + ## HITS:1 COG:araD KEGG:ns NR:ns ## COG: araD COG0235 # Protein_GI_number: 16128055 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 447 92.0 1e-126 MLEDLKRQVLEANLALPQHNLVTLTWGNVSAVDRGQGVLVIKPSGVDYRMMTADDMVVVS LETGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHAD YFYGPVPCTRLMTDAEINGEYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNA EDAVHNAIVLEEIAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ >gi|289774778|gb|GG745513.1| GENE 159 180187 - 182544 2734 785 aa, chain + ## HITS:1 COG:STM0097 KEGG:ns NR:ns ## COG: STM0097 COG0417 # Protein_GI_number: 16763487 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Salmonella typhimurium LT2 # 5 785 3 783 783 1392 84.0 0 MTQPRAGFLLTRHWRDTPQGSELSFWLATDDGPLQVTLPPQESVAFIPEAQQAQAEQLLQ GEKGFRFAPLTLRDFHRQPVVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMER FITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVV YMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAE RYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVAR ELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATV NGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVL DYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRD EAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKG YDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELGKSQLTSALELEYETHF CRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFR NQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNVKLGR AQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTG QLGLF >gi|289774778|gb|GG745513.1| GENE 160 182731 - 185637 4190 968 aa, chain + ## HITS:1 COG:STM0096 KEGG:ns NR:ns ## COG: STM0096 COG0553 # Protein_GI_number: 16763486 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Salmonella typhimurium LT2 # 1 968 1 968 968 1796 92.0 0 MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDT ITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQI DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH DAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIE QLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLL AGNTLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELVSMLMDRHGTSRVLFRN TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPEST DGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSM NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATP VRLLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQ GLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDAL RLIVVTHQ >gi|289774778|gb|GG745513.1| GENE 161 185650 - 186309 225 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 16 181 83 247 285 91 33 5e-17 MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESV HRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWP NRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRF YATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPVDF >gi|289774778|gb|GG745513.1| GENE 162 186352 - 186891 765 179 aa, chain - ## HITS:1 COG:ECs0653 KEGG:ns NR:ns ## COG: ECs0653 COG3697 # Protein_GI_number: 15829907 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Escherichia coli O157:H7 # 10 173 12 175 183 120 38.0 2e-27 MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMG VALQACDQLLWKHRWQALDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWD IDVICPQNGQVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD >gi|289774778|gb|GG745513.1| GENE 163 187071 - 188435 1986 454 aa, chain - ## HITS:1 COG:BS_yxkJ KEGG:ns NR:ns ## COG: BS_yxkJ COG3493 # Protein_GI_number: 16080928 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Bacillus subtilis # 23 452 21 449 450 401 50.0 1e-111 MSTTDNAFSATLEPINTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLP SDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVVESTTK FYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGME PFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRILPMVMLGSLTAIVISGC LNQLGKRSPHLTGEGQLMPNRSNETRSLGESEGVSGKTDVGTLASGALLAVLLYMMGMLG HKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQ ELVNAFTLTNLLVIVSTVSALVATGFFVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTA GNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA >gi|289774778|gb|GG745513.1| GENE 164 188759 - 190384 2026 541 aa, chain + ## HITS:1 COG:STM0053 KEGG:ns NR:ns ## COG: STM0053 COG3290 # Protein_GI_number: 16763443 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Salmonella typhimurium LT2 # 4 526 14 534 539 411 44.0 1e-114 MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSGRAKIQAEEIALMPNLRQQ VSQHDPQAIRAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGH TITTIRKGGLGVSLRSKTPIVDDEGQVIGIVSVGYLTSYLDSITLTKVINIFIAAILLLI ALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDHQRRIEVINHAAR SLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLEN TLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIR YIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLKE SELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRDRIFE RGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAPACPQTEAHNA S >gi|289774778|gb|GG745513.1| GENE 165 190374 - 191072 237 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 6 228 1 224 226 95 29 2e-18 MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHASPPQLVLLDNY LPDGKGVTLMTDPVLATTHCSVIFITAASDMETCSLAIRNGAFDYILKPVSWKRLSQSLE RFIQFYDQQREWKIVDQQNVDSLYQLQAKNFRVDSGSKGIEEKTLALVQGLFSGREAHCF SVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAQPKN >gi|289774778|gb|GG745513.1| GENE 166 191105 - 191932 996 275 aa, chain - ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 1 275 1 269 270 459 85.0 1e-129 MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFE VMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRS VCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQ FGGGSQQQSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPD KLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF >gi|289774778|gb|GG745513.1| GENE 167 192176 - 194524 2718 782 aa, chain + ## HITS:1 COG:imp KEGG:ns NR:ns ## COG: imp COG1452 # Protein_GI_number: 16128048 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Escherichia coli K12 # 1 782 1 784 784 1300 82.0 0 MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSFDRPLVEGRPGDLPVTINADHAK GNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILK GPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTW SVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNG VEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYED DHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFS AGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDINYYQNDVGPFDTHLYGQVAHFVNS NNNMPEATRVHLEPTINLPLSNAWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSR VMPQFKIDGKMVFERDLQEGFTQTLEPRMQYLYVPYRDQSEIGSYDSTLLQSDYTGLFRD RTYSGLDRIASANQVTTGITSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTT GSLVWAGDTYWRIADDWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEY IQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYFDTNTRKAANQMLGVQYNSC CYAIRLGYERKVNGWDSNNNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQS SL >gi|289774778|gb|GG745513.1| GENE 168 194579 - 195865 1355 428 aa, chain + ## HITS:1 COG:STM0092 KEGG:ns NR:ns ## COG: STM0092 COG0760 # Protein_GI_number: 16763482 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Salmonella typhimurium LT2 # 1 428 1 428 428 710 89.0 0 MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQL PDDATLRHQILERLIMDQIVLQLGQKMGVKVSDDQLDQAIANIAKQNNMTMDQMRSRLAY EGINYNTYRSQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHIL IPLAENPTADEVAAAQEQANAIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELP GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMND AQAQAKLEQIAADIKSGKTTFAKAAKAFSEDPGSANQGGDLGWATPDIFDPAFRDALMRL NKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRAS AYVKILSN >gi|289774778|gb|GG745513.1| GENE 169 195871 - 196860 496 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 7 324 9 326 346 195 36 2e-48 MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAQRLGLPLSLLPYD PAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGP VHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPEL LREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNL SGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTA LELAGQGKADVGSFITALNLAIKMIVNTQ >gi|289774778|gb|GG745513.1| GENE 170 196857 - 197678 1023 273 aa, chain + ## HITS:1 COG:ECs0056 KEGG:ns NR:ns ## COG: ECs0056 COG0030 # Protein_GI_number: 15829310 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 510 93.0 1e-144 MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNIST PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSA FTPPPKVDSAVVRLVPHRTMPYPVKEVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTE LGVDPAVRAENISVEQYCKMANWLSNNLPSKES >gi|289774778|gb|GG745513.1| GENE 171 197681 - 198058 432 125 aa, chain + ## HITS:1 COG:STM0089 KEGG:ns NR:ns ## COG: STM0089 COG2967 # Protein_GI_number: 16763479 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Salmonella typhimurium LT2 # 1 125 1 125 125 210 86.0 7e-55 MINSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRET EVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAV PTLIH >gi|289774778|gb|GG745513.1| GENE 172 198063 - 198911 1049 282 aa, chain + ## HITS:1 COG:STM0088 KEGG:ns NR:ns ## COG: STM0088 COG0639 # Protein_GI_number: 16763478 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Salmonella typhimurium LT2 # 1 280 1 280 282 542 91.0 1e-154 MSTYLIGDVHGCYDELIALLAQVEFDPSTDTLWLTGDLVARGPGSLEVLRYVKSLGDSVR LVLGNHDLHLLAVFAGISRNKPKDRLKSLLEAPDADELLNWLRRQPLLQVDEEKKLVMAH AGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAF TRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGI YALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS >gi|289774778|gb|GG745513.1| GENE 173 199204 - 199683 756 159 aa, chain - ## HITS:1 COG:STM0087 KEGG:ns NR:ns ## COG: STM0087 COG0262 # Protein_GI_number: 16763477 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Salmonella typhimurium LT2 # 1 159 1 159 159 312 93.0 2e-85 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNI VISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAHKLYLTHIDAEVE GDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR >gi|289774778|gb|GG745513.1| GENE 174 199858 - 201723 1021 621 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 6 559 9 569 618 397 39 1e-109 MDSHTLIQALIYLGAAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAEAILHFAE IGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMVACGVLIGLFCMLLGLRWQVAELIGM TLALSSTAIAMQAMNERNLTVSQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSGATSLVA FALSALKVAAALALVVALGRYLTRPLLRFVARSGLREVFSAVALFLVFGFGLLLEEVGLS MAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLVTHPLRIVILL VGFLAIKMLMLWLIARPLGVPRAQRRWFAVLLGQGSEFAFVVFGAARMADVLDGEWAKAL TLAVALSMAATPVLLVLLTRLEKSASGQARDADEIDEEQPRVIVAGFGRFGQIAGRLLLS SGVKMVILDHDPDHVDTLRKFDMKVFYGDATRVDLLESAGAEKAEVLINAIDDPHVSLEL VERVKEHFPHLQIISRARDVDHYIKLRQAGVEAPERETFEAALKSGRMTLEALGLGAYEA RERADLFRRFNLQMVEEMVAMAENDAASRVAVFKRTSDMLTGIINEDRHHLSLVQRHGWQ GTEEGRHTGDIADEPENKPSA >gi|289774778|gb|GG745513.1| GENE 175 201716 - 202249 496 177 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 175 1 175 176 308 82.0 3e-84 MILIIYAHPYPQHSHANKRMLEQAGTLEGVEIRSLYQLYPDFNIDVAAEQAALARADLVI WQHPMQWYSVPPLLKLWMDKVLAHGWAYGHNGIALRGKSLMWAVTTGGGESHFDIGSFPG FPVLAQPLQATALYCGMKWLPPFAMHCTFICDDETLQAQARHYRQRLIDWQEAHQNG >gi|289774778|gb|GG745513.1| GENE 176 202345 - 203649 1471 434 aa, chain - ## HITS:1 COG:YPO2535 KEGG:ns NR:ns ## COG: YPO2535 COG0477 # Protein_GI_number: 16122753 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 418 6 423 443 608 76.0 1e-174 MNEKIPSTRWLRIIVPVLIACIMSFMDRVNISFALPGGMEADLGITSQMAGVASGIFFIG YLFLQIPGGRIAVNGSGKKFIAWSLVAWAIVSVATGFVTHQYQLLVLRFILGVSEGGMLP VVLTMVSNWFPEKELGRANAFVMMFAPLGGMLTAPVSGAIIAALDWRWLFIIEGLLSLVV LVVWWFMISDRPQEAHWLPARERDYLVTTLAAERAAKQAEAPVSKAPVKDVFGNAGLMKL VILNFFYQTGDYGYTLWLPTILKGLTGGNMASVGFLAVLPFVATLAGIYVISLFSDHSGK RRLWVRFSLYSFAAALVASVVLRDHMVAAYIALVICGFFLKSATSPFWSMPGRIASPEVA GSARGVINGLGNLGGFCGPYLVGVMMYLYGQNVAVCALAGSLIIAGTMTFLLPKQCDLVD SDSDVAIKKQPRNA >gi|289774778|gb|GG745513.1| GENE 177 203720 - 204670 1079 316 aa, chain - ## HITS:1 COG:YPO2536 KEGG:ns NR:ns ## COG: YPO2536 COG1052 # Protein_GI_number: 16122754 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 7 315 6 314 316 336 54.0 3e-92 MKSVIPRAVLLVAPVIETLQRQLAEHFPLLRLYEQDDPIAFLREQGENIAVVVTRGDVGV ANSVLELLPQAGLIAIFGVGTDAVDLAYARSRQIAVTITSGVLTNDVADLAMGLLLAGSR QLCQGDRFVREGRWLSGGMPLATQVSGKRIGLLGMGNIGQAIARRARGFDMQVLYTDRKK IAGLDYQWCADLHTLAHESDFLVIAASGGEANRGIIDASVFNVMPAHAWLINIARGSLVD EKALIHALQNGVIAGAGLDVFEQEPQVPAALIALDNVVLQPHVASATQETRQKMSEVVFA NVAAWFAGAALPNAID >gi|289774778|gb|GG745513.1| GENE 178 204881 - 205873 1315 330 aa, chain - ## HITS:1 COG:YPO2537 KEGG:ns NR:ns ## COG: YPO2537 COG1609 # Protein_GI_number: 16122755 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 330 1 330 330 436 66.0 1e-122 MKAQRITLHDIAELAGVTKMTVSRYLRTPEKVKPETAERIASVIAEIGYQPDPDNPAMTS VAVPRIGVLIPSFHNQIFADLLAGIESVAAGHGYQTLVVNYDYDRQREEEQIAAVLAFNV KGLLLTESVHSLRADKYLNAAKIPIAEVMGLAENPGRINVGFDNFQAGFDMTTMLLASGK RRIIYFGSMSDVRDEQRYLGYCRAMENAGLAVGRIAPNKVSSVSIGTGMMTLARQMYADM DGILCTNDDLAVGVLQECLASGISVPQELAIAGFHGLEIGQIVSPRLASVLTPRFEMGKV ATEILIKKIKGLPTIEKVDLHYRLSMGETI >gi|289774778|gb|GG745513.1| GENE 179 206110 - 206874 783 254 aa, chain + ## HITS:1 COG:idnO KEGG:ns NR:ns ## COG: idnO COG1028 # Protein_GI_number: 16132088 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 254 1 254 254 406 78.0 1e-113 MNDLFSLQGKRILITGAGQGIGFVMAQGLAQYGAEIIINDLSAPRADDAVMKLRDEGATA HAAVFNVTDAEAVEEAIANIEAHLGPIDVLFNNAGIQRRHPFTEFPVQEWNDVISVNQTA VFLVSQAVAKRMVDRQQGKIINICSMQSELGRDTITPYAAAKGAVKMLTRGMCVELARHN IQVNGIAPGYFNTAMTRTLVEDKAFTDWLCKRTPAARWGDPQELVGAAVFLSSNASNFVN GHLLFVDGGMLVAV >gi|289774778|gb|GG745513.1| GENE 180 206890 - 207420 472 176 aa, chain + ## HITS:1 COG:YPO2540 KEGG:ns NR:ns ## COG: YPO2540 COG3265 # Protein_GI_number: 16122758 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Yersinia pestis # 1 166 1 166 178 250 69.0 9e-67 MAGQCIILMGVSGTGKSTVGQALAHALGAKFIDGDDLHPRNNIVKMATSQPLNDEDRQPW LTRIADVIFSLEQKNESGVLVCSALKKRYRDRLREGNAKLRFLWLTGDYDCILQRMRQRK GHFMPEALLRSQFAALETPDASESDVLAVDITPDVASIVAHSLTLLHSQQPQRIPA >gi|289774778|gb|GG745513.1| GENE 181 207417 - 207884 552 155 aa, chain + ## HITS:1 COG:YPO2541 KEGG:ns NR:ns ## COG: YPO2541 COG2731 # Protein_GI_number: 16122759 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Yersinia pestis # 1 155 1 155 155 128 43.0 4e-30 MIIDTLTAAAENELYPPVIRQALQAVLQQQPHALPPGKYTVESDNVFFTVVEGHTRPLSE QRPEYHRQYLDIHIVLKGEEIIGAGNKGLPVVEDGHFNTTQDIGFCQAIDSETLIHLYPE ELAILFPGELHRPMACLEQGAALRKIVVKIDRALL >gi|289774778|gb|GG745513.1| GENE 182 207932 - 208165 292 77 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4347 NR:ns ## KEGG: Kvar_4347 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 77 1 77 77 124 100.0 2e-27 MRNNILVASALAATAIMFVAGCSSNQSIKTTDGKTIVTSGKPQVDDDTGLVSYKNAETGR VEQINRDQVKSMDELDN >gi|289774778|gb|GG745513.1| GENE 183 208334 - 211558 4619 1074 aa, chain - ## HITS:1 COG:STM0067 KEGG:ns NR:ns ## COG: STM0067 COG0458 # Protein_GI_number: 16763457 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Salmonella typhimurium LT2 # 1 1074 1 1074 1075 2086 97.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKDGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVVEVG INGLDADFLRTLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT AYMYSTYEEECESNPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVERAKEIGYPLVVRPSYVL GGRAMEIVYDEQDLRRYFQTAVSVSNDAPVLLDRFLDDAIEVDVDAICDGEMVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMREQVQKLAFELQVRGLMNVQFAVKDNEVYLI EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAQQGVTKEIIPPYYSVKEVVLPFNKF PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVREGDKERVVDL AAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQITK >gi|289774778|gb|GG745513.1| GENE 184 211576 - 212619 1377 347 aa, chain - ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 347 36 382 382 682 94.0 0 MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNAADEESSQVHAQGLVIRDLPLIASNFRNT EDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNG MDLAKEVTTAETYSWTQGSWTLAGDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCR LTVVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLL ALASGAKTIKMKFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDG TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIELYRQSAK >gi|289774778|gb|GG745513.1| GENE 185 213182 - 214003 984 273 aa, chain - ## HITS:1 COG:STM0064 KEGG:ns NR:ns ## COG: STM0064 COG0289 # Protein_GI_number: 16763454 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Salmonella typhimurium LT2 # 1 273 1 273 273 445 90.0 1e-125 MHDAQIRVAIAGAGGRMGRQLIQAALQMEGVALGAALEREGSSLVGSDAGELAGAGKAGV AVQSSLTAVKDDFDVLIDFTRPEGTLNHLAFCREHGKGMVIGTTGFDDAGKQAIRDAAQE IAIVFAANFSVGVNVLLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAG ALNKDLKECAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERIEITHKASSR MTFANGAVRSALWLKDKKNGLFDMRDVLDLNSL >gi|289774778|gb|GG745513.1| GENE 186 214298 - 214927 537 209 aa, chain - ## HITS:1 COG:CAC0906 KEGG:ns NR:ns ## COG: CAC0906 COG2872 # Protein_GI_number: 15894193 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain # Organism: Clostridium acetobutylicum # 1 206 1 223 387 81 29.0 1e-15 MTERVYYTSDATDGRAQIIACTAEADGRYAIELDQTLFHPQGGGQPADRGWIAGQVVETV IVRGDSVLHILSQPLPLGDVEMKIDASARQLHARLHSAGHLLGLAGEQLGWQPVKAHHWP GEGRITFTSRNNAALPDASALLAPVKAWQAQDLPRQVTFADGLRQVGFGELPAYPCGGTH VARLAELGDIVISQIKMKKGQLVVSYILA >gi|289774778|gb|GG745513.1| GENE 187 215020 - 215949 824 309 aa, chain + ## HITS:1 COG:VCA0889 KEGG:ns NR:ns ## COG: VCA0889 COG0583 # Protein_GI_number: 15601643 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 5 302 9 307 312 249 43.0 6e-66 MNLNLLPDLALFVQIVDQGSFSAVARQSGLTPSAVSRSVSRLEREMGSKLLHRTTRKLRL SDAGETVYQHAQQMLEAARQAIDSASSRQTVAQGKLTLSVPKAVGRFVIHPLMMAFFHRY PQVDVCLRLEDRPLDFIDDGIDLALRITDTPSPGLHGKPLMPIRHVICATEPYLQQHGTP YTPQDLRAHCCISLGETPADARWKFRREGKSETVQTYGRYAANHTAVRLDAVKQHLGIGS LPLFTAREALAKGDIVQVLPEWEFISSYSGDLWLLWAGDKHMPARMRVMIDYLSETVPAL NAGSTEPAK >gi|289774778|gb|GG745513.1| GENE 188 215897 - 216262 331 121 aa, chain - ## HITS:1 COG:PA0563 KEGG:ns NR:ns ## COG: PA0563 COG3152 # Protein_GI_number: 15595760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 15 99 13 87 117 61 36.0 3e-10 MTCGQAYLSGWKETFNFSGRASRQQFWTFFLINVLIATAPLAAWCLATSVNPQYGILSFV VIPFAALWLLLMALPLLAVGCRRMHDIGRSGIWFVLGVIIPWFAIISLALCCLRSTPAPS R >gi|289774778|gb|GG745513.1| GENE 189 216293 - 217207 1177 304 aa, chain - ## HITS:1 COG:STM0051 KEGG:ns NR:ns ## COG: STM0051 COG1957 # Protein_GI_number: 16763441 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Salmonella typhimurium LT2 # 3 304 5 306 306 488 83.0 1e-138 MRLPIILDTDPGIDDAAAIAAALFAPELELQLMTTVAGNVSVEKTTRNALQLLHFWNADV PLAQGASMPLVRPLRDAASVHGESGMEGYDFVEHQRQPLAKPAFQAIRDALMHAAEPITL VAIGPLTNIALLLTQYPECVFNIRRLVIMGGSAGRGNFTPNAEFNIAIDPEAAAKVFHSG LEIVMCGLDVTNRALLAADYLATLPTLNQTGKMLHALFSHYRSGSMSSGLRMHDLCAIAW LARPELFTLQPCFVAVETQGTWTAGTTVVDIEGRLGQPANALVALDIDVEGFQRWAAEVI ALAP >gi|289774778|gb|GG745513.1| GENE 190 217275 - 218225 427 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 298 1 287 632 169 34 2e-40 MQILLANPRGFCAGVDRAISIVENALTLYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQI SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HAGHPEVEGTMGQYNNPQGGMYLVESPEDVLKLEVKNDARLSFMTQTTLSVDDTSDVIDA LRARFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGK AAYLIDDASDIQEAWVKDAACVGVTAGASAPDILVQNVITRLQELGGGEAVPLEGREENI VFEVPKELRVDVREVE >gi|289774778|gb|GG745513.1| GENE 191 218227 - 218676 264 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225086978|ref|YP_002658248.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] # 1 144 1 143 148 106 38 1e-21 MSKSVQSNSAVLVHFTLKLDDGSTAESTRSNGKPALFRLGDTSLSEGLEQQLLGLKEGEK KAFSLEPDAAFGVPSPDLIQYFSRREFIDAGEPEIGAIMLFTAMDGSEMPGVIREVNGDS ITVDFNHPLAGRTVHFDIEVLEIDPALEE >gi|289774778|gb|GG745513.1| GENE 192 218794 - 219294 639 166 aa, chain - ## HITS:1 COG:STM0047 KEGG:ns NR:ns ## COG: STM0047 COG0597 # Protein_GI_number: 16763437 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Salmonella typhimurium LT2 # 1 166 1 166 166 298 92.0 3e-81 MSKSICSTGLRWLWVVVAVLIIDLGSKFLILQNFALGETVPLFPSLNLHYARNYGAAFSF LADSGGWQRWFFSGIAIGICVVLTVLMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF VVDMIDFYVGDWHFATFNLADSAICIGAALIVLEGFLPKPTAKEQA >gi|289774778|gb|GG745513.1| GENE 193 219294 - 222062 3475 922 aa, chain - ## HITS:1 COG:ileS KEGG:ns NR:ns ## COG: ileS COG0060 # Protein_GI_number: 16128020 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 922 17 938 938 1798 91.0 0 MRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKD IIVKSKGLTGYDSPYVPGWDCHGLPIELKVEQQYGKPGEKFTAAEFRAKCREYAAEQIDG QRKDFIRLGVLGDWSRPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALA EAEVEYYDKTSPSIDVAFHAVDKAAVLAKFGVADVNGPVSLVIWTTTPWTLPANRAISLS PEFDYALVQVDGQALILAKDLVESVMKRLGVTDYRILAAVQGSELELMRFQHPFLDFDVP AILGDHVTLDAGTGAVHTAGGHGPDDYTISQKYGLEIANPVGPDGAYLPGTYPSLDGINV FKANDIIVEMLRDSGALLHVEKMQHSYPCCWRHKSPIIFRATPQWFVSMDQKGLRAQSLK EIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPRTLELMEEV AKRVEVDGIQAWWDLDSRDILGDDADSYEKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAA DMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDV MNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMV KPEEMVVLDRWAVGCAQAAQEDILKAYESYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQY TAKADSVARRSCQTALFHIVEALVRWMAPIMSFTADEIWGYLPGDREKYVFTGEWYEGLF GLADNEAMNDGFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYADADLAAKLNALG DELRFVLLTSGANVADYAQAPADAWQSDLLKGLKVVLSKAEGEKCPRCWHYTSDVGKVAE HAEICGRCVSNVAGNGEQRKFA >gi|289774778|gb|GG745513.1| GENE 194 222154 - 223092 403 312 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 298 1 304 317 159 34 1e-37 MKLIRGIHNLSQAPHGCVLTIGNFDGVHRGHQALLQRLREEGRQRGLPVVVMIFEPQPLE LFAADKAPARLTRLREKLGYLAESGVDYVLCVRFDRRFAALTAQDFISELLVRRLGVQFL AVGDDFRFGAGRQGDFLLLQKAGAEYGFDVTSTQTFCEGGVRISSTAVRQALADDDLLLA ETLLGHPFSISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVTGLGDKPIAGVA NIGTRPTVAGVRQQLEVHLLDVVMDLYGRHINVVLRKKIRNEQRFASLDELKAQIARDEL TARELFGLTSQA >gi|289774778|gb|GG745513.1| GENE 195 223009 - 223302 72 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|330009360|ref|ZP_08306517.1| ## NR: gi|330009360|ref|ZP_08306517.1| hypothetical protein HMPREF9538_04211 [Klebsiella sp. MS 92-3] hypothetical protein HMPREF9538_04211 [Klebsiella sp. MS 92-3] # 34 97 1 64 64 118 96.0 1e-25 MHAVKITNGQHAPVRRLTEIMYAAYQLHVWLKTVKIVRVYLVQLSTLTSDCTSATKVLRN SFTQREKAGKLAAPGDFYGGKAVFDCNKLVESCAITT >gi|289774778|gb|GG745513.1| GENE 196 223422 - 223685 422 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206580471|ref|YP_002240528.1| ribosomal protein S20 [Klebsiella pneumoniae 342] # 1 87 1 87 87 167 98 7e-40 MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDR QAAKGLIHKNKAARHKANLTAQINKLA >gi|289774778|gb|GG745513.1| GENE 197 223805 - 224701 1198 298 aa, chain - ## HITS:1 COG:nhaR KEGG:ns NR:ns ## COG: nhaR COG0583 # Protein_GI_number: 16128014 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 295 3 297 301 565 89.0 1e-161 MSHINYNHLYYFWHVYKEGSVVGAAEALFLTPQTITGQIKALEERLQGKLFKRKGRGLEP SELGELVFRYADRMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSGVLDAAVVESE QIHLRCFESTHELLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECSVSFWCMNPAPT KPFPACLEERRLLIPGRRSMLGRKLLNWINVQGLKVEILGEFDDAALMKAFGAAHNAIFV APTLYAHDFYYDESIIEIGRMDSVMEEYHAIFAERMIQHPAVQRICNRDYSSLFTEPR >gi|289774778|gb|GG745513.1| GENE 198 224756 - 225931 1524 391 aa, chain - ## HITS:1 COG:STM0039 KEGG:ns NR:ns ## COG: STM0039 COG3004 # Protein_GI_number: 16763429 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 384 1 384 388 543 86.0 1e-154 MKHLQRFFSSDASGGIVLIIAAALAMVMANTSVTSGLYHSFLETPVQLRVGALEINKNML LWINDALMAVFFLLIGLEVKRELIQGSLASRRQAVFPVIAALGGMIVPALVYLAFNAQDP VAREGWAIPAATDIAFALGVLALLGSRVPTALKIFLMALAIIDDLGAIVIIALFYTHDLS MLSLGVAAAAIAVLVALNLSGVRRTGIYILVGAVLWTAVLKSGVHATLAGVIVGFMIPLE EKHGKSPAKALEHVLHPWVAFMILPLFAFANAGVSLQGVTLAGLTSLLPLGIMAGLFIGK PLGISLFCWLALKLKWASLPEGTTCKQIMAVGILCGIGFTMSIFIATLAFGSVDPALINW AKLGILIGSVLSAVIGYLILRQRVTETRLAV >gi|289774778|gb|GG745513.1| GENE 199 226107 - 227240 1366 377 aa, chain - ## HITS:1 COG:ECs0015 KEGG:ns NR:ns ## COG: ECs0015 COG0484 # Protein_GI_number: 15829269 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Escherichia coli O157:H7 # 1 377 1 376 376 674 96.0 0 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDA QKRAAYDQYGHAAFEQGGMGGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRY NMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGSKPQTCPTCHGAGQVQMRQGFFAV QQTCPHCQGRGTLIKDPCNKCHGHGRVEKTKTLSVKIPAGVDTGDRIRLAGEGEAGEHGA PAGDLYVQVQVKQHAIFEREGNNLYCEVPINFTMAALGGEIEVPTLDGRVSLKVPGETQT GKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNEKQKQLLKELQESFGGPTGENNSPR SKSFFDGVKKFFDDLTR >gi|289774778|gb|GG745513.1| GENE 200 227328 - 229244 2262 638 aa, chain - ## HITS:1 COG:STM0012 KEGG:ns NR:ns ## COG: STM0012 COG0443 # Protein_GI_number: 16763402 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Salmonella typhimurium LT2 # 1 638 1 638 638 1087 97.0 0 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIVAADNGDAWLDVKGTKTAPPQISAEVL KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYL VDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFFGKE PRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTALINKNTTIPT KHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVREAEANAESDRKFEELVQTRNQGD HLLHSTRKQVEEAGDKLPADDKTAIESALTALETSLKGEDKADIEAKMQALAQASQKLME IAQQQHAQQQAGSADAQASNAKDDDVVDAEFEEVKDKK >gi|289774778|gb|GG745513.1| GENE 201 229630 - 230034 448 134 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4381 NR:ns ## KEGG: Kvar_4381 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 134 1 134 134 256 100.0 1e-67 MKPLFRISAGLILGLSFITSAAANDHKILGVVAMPRNETNDLTLKLPVCRVVKRIQLSAE RGDVQLSGATVYFKASRGASHTLNVPAGIKEGSTSGWININSDNDSKRCVKKIAFSGHTV HSSDMASLKIIGDD >gi|289774778|gb|GG745513.1| GENE 202 230062 - 230811 653 249 aa, chain + ## HITS:1 COG:yaaW KEGG:ns NR:ns ## COG: yaaW COG4735 # Protein_GI_number: 16128005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 232 1 232 237 277 69.0 1e-74 MHINYLADDDLAFLPECSEAHLEAFTRILTHGENGKPRLSSTLLRNETFLAMEGHPERYR RNWQLIAGELQHFGGDSIANTLRRHGKFYRAILLDVCKRLKAKVDKQMTTPQIEQQLLEH FLQHSWNKLDAEQKAQFLAAVDCRSHELENLLPHLLRHRKLSEGVALLLDERLTAILRTH AAVSVIGHGLVRGAGLGGPLGAALNSVKAVSGSAYRVTIPAVLHIACLRQMIQPPSGATE IGEKYPARS >gi|289774778|gb|GG745513.1| GENE 203 230900 - 231466 841 188 aa, chain + ## HITS:1 COG:STM0009 KEGG:ns NR:ns ## COG: STM0009 COG1584 # Protein_GI_number: 16763399 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 186 1 186 188 266 86.0 2e-71 MGNTKLANPAPLGLMGFGMTTILLNLANSGLFAFDVAILAMGIFYGGIAQIFAGLLEYKK GNTFGLTAFTSYGSFWLTLVAILLMPKMGLAEAPNAHFLGMYLGLWGIFTLFMFFGTLKA ARMLQFVFLSLTVLFALLAIGHLVDNEGIVKVAGWVGLVCGASAIYLAMGEVLNEQFGRT VLPIGEPR >gi|289774778|gb|GG745513.1| GENE 204 231523 - 232827 1782 434 aa, chain - ## HITS:1 COG:YPO0465 KEGG:ns NR:ns ## COG: YPO0465 COG0477 # Protein_GI_number: 16120794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 5 423 29 447 462 600 77.0 1e-171 MSYANRPLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVVGELFFPADIPEWLRQVQTFG IFAAGYLARPLGGIIMAHFGDLVGRKKMFTLSILLMALPTLAIGLLPTYSSAGIVAPLLL LLMRILQGAAIGGEVPGAWVFVAEHVPEKRIGIACGTLTAGLTVGILLGSVVATLINTSL TPQGIHDGGWRIPFLLGGVFGLIAMYLRRWLQETPIFLEMQQRKALAQELPVKAVALKHQ KAVVISMLLTWLLSAGVVVVILMSPVWLQKHYGFAPAITLQANSIATIMLCIGCLLAGLA ADRFGASRTFIVGSLLLAVASWAFYHLSGASPQRLFLLYGTVGLCVGVVGAVPYVMVRAF PAEVRFTGISFSYNLSYAIFGGLTPIAVTMLMGVSPMAPAWYVLALSLMGLGLGIWLRQG LTASAGLPEGELQR >gi|289774778|gb|GG745513.1| GENE 205 232947 - 233534 683 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 6 191 2 191 194 267 71 4e-70 MNTLRIGLVSISDRASSGVYQDKGIPALEEWLARALTTPFELQTRLIPDEQVIIEQTLCE LVDEMGCHLVLTTGGTGPARRDVTPDATLAIADREMPGFGEQMRQVSLHFVPTAILSRQV GVIRKQALILNLPGQPKAIQETLEGVKDADGKVLVHGIFASVPYCVQLLEGPYVETDGRV VEAFRPKSARRETLS >gi|289774778|gb|GG745513.1| GENE 206 233634 - 234587 1359 317 aa, chain - ## HITS:1 COG:ECs0008 KEGG:ns NR:ns ## COG: ECs0008 COG0176 # Protein_GI_number: 15829262 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 588 94.0 1e-168 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILGAAQIPEYRKLIDDAVAWAR SQSSDRAQQILDASDKLAVNIGLEILKLIPGRISTEVDARLSYDTEASIAKAKRIIKLYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVG RILDWYKANTDKKEYAPAEDPGVVSVSEIYEYYKQHGYETVVMGASFRNVGEILELAGCD RLTIAPALLKELSESEGAVERKLVYTGEVKARPERITESEFLWQHNQDPMAVDKLAEGIR KFAIDQEKLEKMIGELL >gi|289774778|gb|GG745513.1| GENE 207 234790 - 236220 763 476 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 447 7 446 456 298 38 2e-79 MPDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTS FQALCTSLAARVGSGNLAGVTLAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERD SQGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNTVQANSVAHALHYAFDLPAAV SGGVLAIFVFLAILRGLRGVARLMQWLVPIMALLWIATSLLIGLWHVTALPTIFATIFRC AFGWQEAAAGAVGYSISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQM IGVFIDTIVICTASAIIVMLAPRPDNEYTLNGIQDLQHAMSVLVGGWGADFIAFIVLLFA FSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLGTLVSLPVVWQSADIIMALMA MTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDAARYPDIHQQLAPGAWNELPRE >gi|289774778|gb|GG745513.1| GENE 208 236298 - 237071 1120 257 aa, chain + ## HITS:1 COG:yaaA KEGG:ns NR:ns ## COG: yaaA COG3022 # Protein_GI_number: 16128000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 257 1 257 258 427 83.0 1e-120 MLILISPAKTLDYQSPLATTRYTQPELLEYSQQLIGIARKLTAPQIGKLMSISDKLADLN ATRFHDWHPDFTPQNARQAILAFKGDVYTGLQAETLTEDDFDFAQRHLRMLSGLYGVLRP LDLMQPYRLEMGIRLENPRGKDLYQFWGETITEKLNQALQAQGDDIVINLASDEYFKSVK TQKLQGQLIKPVFLDEKNGKFKVISFYAKKARGLMSRYIIENRLTQPEQLKAFNSEGYFF DAEASEKGELVFKRHEQ >gi|289774778|gb|GG745513.1| GENE 209 237141 - 237518 256 125 aa, chain - ## HITS:1 COG:no KEGG:KPK_4751 NR:ns ## KEGG: KPK_4751 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 125 1 125 125 243 100.0 1e-63 MRILSLLFVVFALIGCSGTTIGGNEDKLTPAYLKQHLIVGKTTKAEVRQYFGAPDSGHTT VTASGKESWYYSVDKGINLVSLAGSMIPVTGASQAADAVDKSSQKDSNSLMIFFDEKGVV ENWVR >gi|289774778|gb|GG745513.1| GENE 210 237832 - 239112 1972 426 aa, chain - ## HITS:1 COG:ECs0004 KEGG:ns NR:ns ## COG: ECs0004 COG0498 # Protein_GI_number: 15829258 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Escherichia coli O157:H7 # 1 425 1 425 428 773 91.0 0 MKLYNLKDHNEQVSFAQAVTQGLGKHQGLFFPHDLPEFSLTEIDDMLAQDFVTRSAKILS AFIGDEIPQDVLQQRVRAAFAFPAPVSKVQDDVGCLELFHGPTLAFKDFGGRFMAQMLTH IAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETV AIDGDFDACQALVKQAFDDEELKATLGLNSANSINISRLLAQICYYFEAAAQLPQEARNQ LVISVPSGNFGDLTAGLLAKSLGLPIKRFIAATNANDTVPRYLQGGEWAPKATQATLSNA MDVSQPNNWPRVEELFRRKIWRLSELGYAAVDDETTKAAMRELKAIGYISEPHAAIAWRA LRDQLQPGEYGLFLGTAHPAKFKESVEEILQETLPLPKELADRADLPLLSHNLPADFAAL RKLMMG >gi|289774778|gb|GG745513.1| GENE 211 239116 - 240045 1004 309 aa, chain - ## HITS:1 COG:STM0003 KEGG:ns NR:ns ## COG: STM0003 COG0083 # Protein_GI_number: 16763393 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 579 89.0 1e-165 MVKVYAPASSANMSVGFDVLGAAVTPVDGTLLGDNVTVEAAEQFSLHNLGRFASKLPTAP QENIVYQCWESFCREIGKTVPVTMTLEKNMPIGSGLGSSACSVVAALVAMNEFCGKPLNE TRMLALMGEMEGRISGSIHYDNVAPCYLGGMQLMIEENGIISQQVPGFDEWLWVLAYPGI KVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYTRQPQLAAKLMKDVIAEPYRTKLLP GFSEARQATMEIGAQACGISGSGPTLFALCDKPDTAQRVADWLGAHYLQNQEGFVHICRL DTAGARVVG >gi|289774778|gb|GG745513.1| GENE 212 240047 - 242509 2927 820 aa, chain - ## HITS:1 COG:STM0002_1 KEGG:ns NR:ns ## COG: STM0002_1 COG0527 # Protein_GI_number: 16763392 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 867 94.0 0 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTIGGQDA LPNIADAERIFAELLQGLADAQPAFPLAQLKAFVEQEFAQIKHVLHGISLLGQCPDGVNA ALICRGEKLSIAIMAGLLEARGHKVSVINPVEKLLAVGHYLESTVDIAESTRRIAASQIP ADHMILMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQV PDARLLKSMSYQEAMELSYFGAKVLHPRTIAPIAQFQIPCLIKNTGNPQAPGTLIGASRD EDDLPVKGISNLNNMAMFNVSGPGMKGMVGMAARVFATMSRAGISVVLITQSSSEYSISF CVPQSDCARAKRAMEDEFYLELKEGLLEPLAIMERLAIISVVGDGMRTLRGISAKFFAAL ARANINIVAIAQGSSERSISVVVSNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGAL LEQIKRQQGWLKNKHIDLRVCGVANSQALLTSVHGLNLENWSEALAEAKEPFNLGRLIRL VKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSLDYYHQLRHAASSSR RKFLYDTNVGAGLPVIENLQNLLNAGDELRHFSGILSGSLSFIFGKLDEGVSFSAATALA REMGYTEPDPRDDLSGVDVARKLLILARETGRELELSDIIVESALPADFDASGDVETFMA RLPSLDDGFASRVAKARDEGKVLRYVGNIEEDGTCRVKIAAVDGNDPLFKVKNGENALAF YSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|289774778|gb|GG745513.1| GENE 213 242871 - 243557 536 228 aa, chain - ## HITS:1 COG:lasT KEGG:ns NR:ns ## COG: lasT COG0565 # Protein_GI_number: 16132220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli K12 # 1 226 1 226 228 345 79.0 3e-95 MRLTIILVAPARAENVGAAARAMKTMGFRDLRIVDSEAHLAPAARWVAHGSGDILDGVTT YPTLAAALHDVDFTVATTARSRARFHYYATPQQLLPLLEEKAQWMTHAALVFGREDSGLS NEELALADVLTGVPMVADYPSLNLGQSVMVYCYQLASLMQQTAPAAAAADHHQLQALRIR TEALLSRLGVEEDAKLADWLAQRMGLLQQRDTAMLHRLLHDIEKNLPE >gi|289774778|gb|GG745513.1| GENE 214 244190 - 244906 943 238 aa, chain + ## HITS:1 COG:STM4598 KEGG:ns NR:ns ## COG: STM4598 COG0745 # Protein_GI_number: 16767839 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 238 1 238 238 459 97.0 1e-129 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSENDINLVIMDINLPGK NGLLLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGTVSEERRSVESYKFNGWELDINSRSLVSPNGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLQE >gi|289774778|gb|GG745513.1| GENE 215 244969 - 246321 1584 450 aa, chain - ## HITS:1 COG:creD KEGG:ns NR:ns ## COG: creD COG4452 # Protein_GI_number: 16132217 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Escherichia coli K12 # 1 449 1 450 450 550 63.0 1e-156 MLKSPLFWKITTLIGCVVLLSLPLMMVRELINERADYRSEVVDAIEQSTSGSQKLAGPLI AIPVTETLTRMENQKEVNYQRSWVYYWLPESLAVTGKQTVESRRVGIYSGQVWHNALQIK ASFDPLRLAALRKTNIVLGQPRLVVSVGDARGIGAIHAPEVNGNVLSVEPGLGISGDGAG IHMPMPALAEDNKPLEIAFSLDLNGTGEFSLVPIGRNSELQLTSNWPHPGFLGSFLPTQR EVSAAGYRAHWQSSWFANDMGSYFKDDMEIPWSRLPAFSADVMSLADQYQLTDRATKYAI LLIGLTFMAFFVFESLTRHPLHPMQYLLVGLSLVLFYLVLLALSEHVGFTAAWLAASLSG AVMNGVYLQAVLRGWRNSLLFVAALLLLDGVMWFLLHSEDSALLLGTGVLALSVLMFLTR RVDWYALSLPKGSAPPPPAADDDKLRLWKE >gi|289774778|gb|GG745513.1| GENE 216 246382 - 247806 1350 474 aa, chain - ## HITS:1 COG:ECs5357 KEGG:ns NR:ns ## COG: ECs5357 COG0642 # Protein_GI_number: 15834611 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 660 72.0 0 MRIGMRLLLGYFLIVAIAAWFVLSIFVQEVKPGVRGATEGTLNDTATLLAALAREDLLAA NPQQGRLAQAFQQLNQQPINAHIGGIKKVRNEYRVYLTDARGKVVFDSSGQATGQDYSRW NDVWLTLRGQYGARSTRSDPHDETSSVMYIAAPVMDKGRIIGVLSVGKPNLAMTPVIKRS ERRILWAGGALLGIALLIGVGVVWWINFSIGKLVRYADSVTAERPLPLPEVGSSELRKLA QALESMRVKLEGKNAIENYVYDLTHELKSPLAAIRGAAEILREGPPPAVAARFTDNILAQ NTRMQLLVERLLQQARLESRLEIKPQPVSIDALYQRLTEERDIALAAKAITLRWRESGML VNGDGELLAQALGNLLDNAIDFTPPGGEIALAAEKRNEEVQLSVIDNGRGIPDYALERIF ERFYSLPREDGHKSSGLGLAFVREVARLHHGDINLHNRPEGGVVATLRLHRPFT >gi|289774778|gb|GG745513.1| GENE 217 247806 - 248495 694 229 aa, chain - ## HITS:1 COG:ECs5356 KEGG:ns NR:ns ## COG: ECs5356 COG0745 # Protein_GI_number: 15834610 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 226 1 226 229 353 76.0 1e-97 MQQPRIWLVEDEQSIADTLVYPLQQEGFQVTVFGRGLPALEAAAHQAPDVAILDVGLPDI SGFELCRRMLTRYPALPVLFLTARSDEVDKLLGLEIGADDYIAKPFSPREVCARVRTVLR RLQKFAAPSPVVRVGEFVLDEQAASISWFGQPLNLTRYEFLLLKTLLHAPGRVFSRQQLM ELVWSDAWESLDRTVDTHIKTLRAKLRAVNPEVTPINTHRGMGYSLGRG >gi|289774778|gb|GG745513.1| GENE 218 248508 - 248981 801 157 aa, chain - ## HITS:1 COG:YPO0457 KEGG:ns NR:ns ## COG: YPO0457 COG3045 # Protein_GI_number: 16120786 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 155 1 155 155 261 83.0 3e-70 MKYKKFAMGLLLLAGCQMAQAEQIGSVDTVFKWLGPDHKIVVEAFDDPDVQNVTCYISRA KTGGIKGGLGLAEDTSDAAISCQQVGPIELTDKIKNGKSQGDVVFQKRTSLVFKKLQVVR FYDAKRNALVYLTYSDKVVDGSPKNAISAVPIMPWNK >gi|289774778|gb|GG745513.1| GENE 219 249191 - 250060 949 289 aa, chain + ## HITS:1 COG:STM4586 KEGG:ns NR:ns ## COG: STM4586 COG2207 # Protein_GI_number: 16767827 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 289 1 289 289 502 83.0 1e-142 MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRL GEFTLPKHEFVALPTTQLLGVTQSYTCKLEEISDFRNQMRVQFWRDFLGNSPSIPPVLYG LHEPRPSLEKDDEQEVFYTTALTPEMANGHLQNAHPVTLEGGEYVMFTYEGLGTGLQEFI LTVYGTCMPMLNLTRRKGLDIERFYPEDENRDQATPIQLRCEYLIPIRR >gi|289774778|gb|GG745513.1| GENE 220 250057 - 250704 740 215 aa, chain - ## HITS:1 COG:STM4585 KEGG:ns NR:ns ## COG: STM4585 COG0406 # Protein_GI_number: 16767826 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Salmonella typhimurium LT2 # 1 215 1 215 215 362 88.0 1e-100 MLQVYLVRHGETQWNAERRIQGQSDSPLTAHGERQAWQVGERARTLGITHIITSDLGRTR RTAEIIAEACGCSVIADARLRELDMGVLEKRHIDSLSDEEEGWRRQLVNGTPDGRIPQGE SMQELSERMHAALASCLELPAGSRPLLVSHGIALGCLVSTILGLPAYAERRLRLRNCSIS RVDYQQSPWLASGWVVETAGDVSHLDAPAMDELQR >gi|289774778|gb|GG745513.1| GENE 221 250818 - 251333 211 171 aa, chain + ## HITS:1 COG:yjjX KEGG:ns NR:ns ## COG: yjjX COG1986 # Protein_GI_number: 16132211 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 170 4 173 173 285 86.0 3e-77 MHHVVSATTNPAKIQAILQAFNEIFGEGSCHIESVSVESGVPEQPFGSEETRAGARNRVA NARLVQPSADFWVAIEAGIDDGSTFSWVVIESADRRGEARSATLPLPEVILEQVRAGEAL GPVMSQYTGIDQIGRKEGAIGVFTGGKLTRSSVYHQAVVLALSPFHNAIYR >gi|289774778|gb|GG745513.1| GENE 222 251320 - 251649 430 109 aa, chain - ## HITS:1 COG:ECs5351 KEGG:ns NR:ns ## COG: ECs5351 COG2973 # Protein_GI_number: 15834605 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 142 87.0 1e-34 MTQQSPYSAAVAEQRHQEWLRFVALLQQAYAEDLHLPLLQLMLTPDEREALGTRVRIIEE LLRGEMSQRELKNELGAGIATITRGSNSLKSAPAELRQWLEQTLLASDK >gi|289774778|gb|GG745513.1| GENE 223 251738 - 253675 2355 645 aa, chain - ## HITS:1 COG:ECs5350 KEGG:ns NR:ns ## COG: ECs5350 COG0741 # Protein_GI_number: 15834604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 645 10 654 654 1056 82.0 0 MEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRNRYAQIKQAWDNRQMDVVDQLMPTLS TYPLYPYLQYRQITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARRSDWRGLLA FSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGAKDLWLTGKNQPGACEPLFSAWRDSGQQD PLAYLERIRLAMKAGNIGLVKSLAQQMPGNYQSIASAVVALANDPNSVLTFARTTGATDF TRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGTDVTEEQAI WRDDAIMRSQSTPLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQADLLLERG RDEEAQAILRSLMQQRGFYPMVAAQRLGEEYTFRIDKASGTIDPALASGPEMARVRELMY WNMDNTARTEWANLVTSRTKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQLEERFPLAY NDLFARYISGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVSMFSIPG YSGPSQLLDPETNINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRTWQGNSAGRIDAV AFVESIPFSETRGYVKNVLSYDAYYRYFMGQQDKLFSDAEWRQRY >gi|289774778|gb|GG745513.1| GENE 224 253904 - 255571 2464 555 aa, chain + ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1070 96.0 0 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTEIE GEARPQPGIKIGYLPQEPQLNPEHTVRESVEEAVAEVVNALKGLDEVYAKYAEPDADFDK LAAQQGKFEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNNV EYQKRNETNELFIPPGARLGDKVLEVSHLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGA GKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDNSKTVWEEVSGGLDIMKIGNT EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA DALEPKRIKYKRISK >gi|289774778|gb|GG745513.1| GENE 225 255829 - 257061 1849 410 aa, chain - ## HITS:1 COG:STM4580_3 KEGG:ns NR:ns ## COG: STM4580_3 COG3172 # Protein_GI_number: 16767821 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Salmonella typhimurium LT2 # 226 410 1 185 185 366 94.0 1e-101 MSSFDYLKSAIKQKGCTLQQVAEASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFP RRQKSVGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDDTRDRELFEESAMSQQPTV PDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSHGIRAFMSEKGIEPNRIYTSEE ADAPQYLEHLGIETVLIDPKRTFMNISGGQIRENPFRYWEYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVSTQAFCLKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG SSVDRKEFQSLLVSLLKENEIEFVHVKESDYDARFLRCVELVKQLMGEQG >gi|289774778|gb|GG745513.1| GENE 226 257083 - 258465 1623 460 aa, chain - ## HITS:1 COG:sms KEGG:ns NR:ns ## COG: sms COG1066 # Protein_GI_number: 16132206 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Escherichia coli K12 # 1 460 1 460 460 877 96.0 0 MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEMRIAASPQVARNERLSGYAGNAGV SKVQKLSDISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA EGMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICQIADEEKPQLMVIDSIQ VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSV MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA KHGFRRAIVPAANVPKKVPEGMQIFGVKKLSDALSVFDDL >gi|289774778|gb|GG745513.1| GENE 227 258475 - 259446 1358 323 aa, chain - ## HITS:1 COG:ECs5346 KEGG:ns NR:ns ## COG: ECs5346 COG0560 # Protein_GI_number: 15834600 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 # 1 323 1 322 322 567 88.0 1e-161 MPNSLTWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLNKRRLTDWQREL GAALVIVASWVVEDYQVIRLAGSLTPRATRLAHEAGLDVAPLGKIPHLRTPGLLVMDMDS TAIQIECIDEIAKLAGTGELVSEVTERAMRGELDFTASLRQRVATLKDADATILLQVRDA LPLMPGLAQLVLKLETLGWKVAIASGGFTFFAEYLRDKLHLDAVFANELEIRDGKLTGNV LGDIVDAKYKANTLRKLAEKYEIPTAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQA EVTIRHADLMGVFCILSGSMNQK >gi|289774778|gb|GG745513.1| GENE 228 259551 - 260198 852 215 aa, chain + ## HITS:1 COG:ECs5345_1 KEGG:ns NR:ns ## COG: ECs5345_1 COG3726 # Protein_GI_number: 15834599 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Escherichia coli O157:H7 # 1 204 1 204 224 326 87.0 2e-89 MVRAKLKFRLHRVVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNL VPLMRSETPDEKRINQLLTQLTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKA GGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLT RTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL >gi|289774778|gb|GG745513.1| GENE 229 260198 - 261214 1332 338 aa, chain + ## HITS:1 COG:lplA KEGG:ns NR:ns ## COG: lplA COG0095 # Protein_GI_number: 16132203 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Escherichia coli K12 # 1 338 1 338 338 637 89.0 0 MSTLRLLLSDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRR MEEDHVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTVSTAIVLAALNSLGVTAEASG RNDLVVKTDSGDRKVSGSAYRETIDRGFHHGTLLLNADLSRLANYLNPDQKKLKAKGITS VRGRVANLVELLPGITHQHICEAIQEAFFSHYGERVDAEVISPDNTPDLPNFAETFARQS SWEWNFGQAPAFSHLLDERFRWGGVELHFDVEKGHITRTQAFTDSLNPAPLEALAARLVG CQYRAEVLQQQCEALVGDFPEQEAELKELSAWMAGAVR >gi|289774778|gb|GG745513.1| GENE 230 261295 - 262014 965 239 aa, chain - ## HITS:1 COG:STM4570 KEGG:ns NR:ns ## COG: STM4570 COG0813 # Protein_GI_number: 16767811 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 451 96.0 1e-127 MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLEDVREVNNVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVREDVKLRDVVIGMGACTDSKVNRLR FKDHDFAAIADFGMVRNAVDAAKALGVDARVGNIFSADLFYTPDPSMFDVMEKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE >gi|289774778|gb|GG745513.1| GENE 231 262117 - 263340 1797 407 aa, chain - ## HITS:1 COG:STM4569 KEGG:ns NR:ns ## COG: STM4569 COG1015 # Protein_GI_number: 16767810 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Salmonella typhimurium LT2 # 1 407 1 407 407 813 96.0 0 MKRAFIMVLDSFGIGATEDADRFGDVGADTMGHIAEACAKGEADNGRKGPLNLPNLTRLG LVKAHEGSTGKIAAGMDGNAEVIGAYAWAHELSSGKDTPSGHWEIAGVPVLFDWGYFSDH ENSFPQELLDKLVKRANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAP TVLQKLVDEKNGHVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDETIVFT NFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMELVGEDDILILTADHGCDPTWTGTDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTIAKYFGTSDMEYGKAMF >gi|289774778|gb|GG745513.1| GENE 232 263393 - 264715 1606 440 aa, chain - ## HITS:1 COG:STM4568 KEGG:ns NR:ns ## COG: STM4568 COG0213 # Protein_GI_number: 16767809 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Salmonella typhimurium LT2 # 1 440 1 440 440 791 96.0 0 MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMSMPERVSLT MAMRDSGTVLNWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHT GGTLDKLEAIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSAALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAADDAEARAKL QAVLDNGKAAEVFGRMVAAQKGPTDFVENYDHYLPTAMLSKAVYADTEGFISAMDTRALG MAVVSMGGGRRQASDTIDYSVGFTDMARLGDHVDGQRPLAVIHAKDENSWQEAAKAVKAA IKLDDKAPEITPTVYRRITE >gi|289774778|gb|GG745513.1| GENE 233 264829 - 265608 1017 259 aa, chain - ## HITS:1 COG:STM4567 KEGG:ns NR:ns ## COG: STM4567 COG0274 # Protein_GI_number: 16767808 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 259 7 265 265 446 97.0 1e-125 MTDLKASSLRALKLMDLTTLNDDDTNEKVIALCHQAKTPVGNTAAVCIYPRFIPIARKTL NEQGTPDIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALIAGNEQVGFE LVKACKEACAAANVLLKVIIETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPE SARIMMEVIRDMGVEKTVGFKPAGGVRSAEDAQQFLAIADELFGADWADSRHYRFGASSL LASLLKALGHGDGKSASSY >gi|289774778|gb|GG745513.1| GENE 234 266025 - 266810 931 261 aa, chain - ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 1 257 1 257 259 382 75.0 1e-106 MSHRFIDTHCHFDFPPFAEDETASLARAAQVGVGQIIVPAISAARFNRVLALAAQHEALY AALGMHPIVIEQHADEGLAQLERCLSLRPPKLVAVGEIGLDLYRDDPQFDRQQALLEEQL RLAKRYDLPVILHSRRTHDKLAMLLKKHALPRTGVVHGFAGSLQQAERFVQLGYKIGVGG TITYPRASKTREVMARLPLSALLLETDAPDMPLNGFQGQPNRPEQVARVFDALCELRAEP APTIEAAVMANTKSLFSALAG >gi|289774778|gb|GG745513.1| GENE 235 266807 - 267880 1044 357 aa, chain - ## HITS:1 COG:STM4563 KEGG:ns NR:ns ## COG: STM4563 COG4667 # Protein_GI_number: 16767804 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Salmonella typhimurium LT2 # 1 357 1 357 357 580 78.0 1e-165 MGQRIPVTLGNIAPLAVKPFRPGKLALVCEGGGQRGIFTAGVLDEFMRAGFNPFDLMLGT SAGAQNLSAYMCNQQGYARKVITRYTTSRQFFDPMRFVRGGNLIDLDWLVEATSQQMPLA MNYAEAQFALGKELWLCACRGDDYSASYFSPTPQTWLDLIRASSAIPGFYRSGVLLDGVS YLDGGVSDAIPVQEAARRGAQTIVVIRTVPSQMFYTPQWFKRMERWLGESSLQPLVNLVH HHENTYRAIQQFIEKPPGKLRIFEIYPQRPLRSMALGSRLPALLEDYKTGRQCGRYFLAT VGKLLADQPPLLRHAPRIARPAPVVVPPVPVANEAPQATVIPAPQANDASFDHEDLA >gi|289774778|gb|GG745513.1| GENE 236 268034 - 268195 141 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|157368899|ref|YP_001476888.1| ## NR: gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 [Serratia proteamaculans 568] protein of unknown function DUF1328 [Serratia proteamaculans 568] # 1 53 33 85 85 80 96.0 4e-14 MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFTGRRRP >gi|289774778|gb|GG745513.1| GENE 237 268325 - 268945 782 206 aa, chain - ## HITS:1 COG:STM4561 KEGG:ns NR:ns ## COG: STM4561 COG2823 # Protein_GI_number: 16767802 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Salmonella typhimurium LT2 # 1 206 3 205 205 159 60.0 3e-39 MTRLKNANMLLALFLGLAALNASAETEKTTVDSAKSAASNAGEAVDNSINKVGDFMDDST ITARVKAALIDHKDINSGDISVKTENKVVTLSGDVTSTEQKSQALSVAKGVEGVSHVNDK LTVHHKSSSETATLKGYAGDTAITSEVKAKLLADDIVPSRNVKVETNAGAVHLTGTVASA AQAERAAEIAKAVSGVKSVRNDLSVK >gi|289774778|gb|GG745513.1| GENE 238 269165 - 270754 2338 529 aa, chain - ## HITS:1 COG:STM4560 KEGG:ns NR:ns ## COG: STM4560 COG4108 # Protein_GI_number: 16767801 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Salmonella typhimurium LT2 # 1 529 1 529 529 1057 97.0 0 MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSSQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFK GVYHLYKDETYLYQTGKGHTIQEVRIVKGLNNPELDAAVGEDLAQQLRDELELVQGASNE FDKDLFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRNTDTREVTATEEKFTGFV FKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRIGKDVVISDALTFMAGDRSHVEEAY PGDIIGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLS EEGAVQVFRPIANNDLIVGAVGVLQFDVVVARLKSEYNVEAIYESVNVATARWVESTDVK KFEEFKRKNEVQLALDGGDNLTYIAPTMVNLNLTQERYPDVVFRKTREH >gi|289774778|gb|GG745513.1| GENE 239 270845 - 271522 732 225 aa, chain - ## HITS:1 COG:ECs5332 KEGG:ns NR:ns ## COG: ECs5332 COG1011 # Protein_GI_number: 15834586 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 401 82.0 1e-112 MKWDWIFFDADETLFSFDSFSGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGVITS LQLQHQRFDSWAERLNVKPGELNDAFMNAMAEICAPLPGAVSLLNALQGKVRMGIITNGF TSLQQTRLERTGLRDHFDLLIISEEVGVAKPDARIFDYALAQAGNPPRSRVLMVGDTAES DIRGGVNAGLATCWLNAHQQTLPVDLQPDWTVTSLSELEQLLCKH >gi|289774778|gb|GG745513.1| GENE 240 271537 - 271983 645 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 148 1 148 148 253 84 9e-66 MNTISTLSTADLSNAWQIEKRAHAFPWSEQTFASNQGERYLNYQLAVDGEMAAFAITQIV LDEATLFNIAVDPAYQRRGLGRELLEHVIDEVEKRGVVTLWLEVRASNAAAIALYESVGF NEATIRRNYYPTVDGREDAIIMALPISM >gi|289774778|gb|GG745513.1| GENE 241 271952 - 272365 413 137 aa, chain - ## HITS:1 COG:STM4557 KEGG:ns NR:ns ## COG: STM4557 COG3050 # Protein_GI_number: 16767798 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Salmonella typhimurium LT2 # 1 136 1 136 145 200 79.0 7e-52 MTSRRDWQLQQLGITQWSLRRPGALQGEIAISLPEHIRLVMVAETPPSLTEPLIGDILRA LAVTPDQVLQLTPERVAMLPQDSRCNSWRLGTEASLPLAGAQVSTPAFDELQTSAPARRA LWQQICAHEHDFYPQHG >gi|289774778|gb|GG745513.1| GENE 242 272468 - 273496 250 342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 333 106 367 371 100 29 6e-20 MSAFTPASEVLLRHSDDFESARVLFAGDLQDDLPARLDTAASRAHTQQFHHWQVLNRQMG DNVRFSLVAEAADVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGIDIFVVGENRSGVRS AEQMLAEYAPLNKIDSARRCGLYHGRLEKQPTFDADAFWGEYALDNLTIKTLPGVFSRDG LDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATL AANGFAGDVFASNVFSEVNGRFDMIISNPPFHDGLQTSLEAAQALIRGAVRHLNSGGELR IVANAFLPYPQVLDETFGFHEVIAQTGRFKVYRTIMTRQAKK >gi|289774778|gb|GG745513.1| GENE 243 274009 - 274248 190 79 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4424 NR:ns ## KEGG: Kvar_4424 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 79 39 117 117 130 100.0 2e-29 MLQRALGSGWGVVVPGVLIAALGYAGVSADVWRALVTVGMLMSAAMIWHRQLRHFILLPS CVALIGGIMLMILDFKLGG >gi|289774778|gb|GG745513.1| GENE 244 274513 - 275559 1062 348 aa, chain + ## HITS:1 COG:STM4551 KEGG:ns NR:ns ## COG: STM4551 COG2199 # Protein_GI_number: 16767795 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Salmonella typhimurium LT2 # 1 348 1 348 354 428 63.0 1e-120 MTAQTWRAHYAQKYQYSLRLFLLLNFISSSLSLVSPLFTVVRFTLPCALIVACSGLLLLW HWKWPQAKINIPAISLLFGMLWAWHVVAKAMLLTPPHFNYLVIALLSILFIGTIAFSNNI TAFTLHSLPTFLICLIMSEGEQWLRMTYCFVLPIAGITLQNIIQKRNDAFTQGLMDKLMQ ERNTLNDLSMLDPLTGLYNRRGLQNRLDTLLALDGDNHFVLLLDIDHFKAYNDHYGHMMG DQALIRVSAAIRNAVRSRDIVARFGGEEFMVLLTNSSEETAWQAAERIRQRVYDLKIPHM FNESVATNVTISIGLTPLIDDNIEQALARADGALYEAKNKGRNIILAS >gi|289774778|gb|GG745513.1| GENE 245 275671 - 276459 729 262 aa, chain + ## HITS:1 COG:STM4550 KEGG:ns NR:ns ## COG: STM4550 COG4114 # Protein_GI_number: 16767794 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Salmonella typhimurium LT2 # 1 262 1 262 262 364 66.0 1e-101 MAWRSLSLSDELIWRAPFPTAERALAESLRAKITALRPHLLDFLRLDEPAPPHALTLAEW SQPIALRSLLAIWSDHIYRHQPTQPREQKPLLSLWAQWYIGLLVPPLMLALLNEPQGLSL APEHFHVEFHESGRAACFWIDVHSDARIAALSPQARIDALVIRTLQPVVEALEATGEING KLIWSNTGYLINWYLGEMRTQLGDEQVAALRQHCFFEKQLADGQDNPLWRTVVLREGLLV RRTCCQRYRLPDVQQCGDCTLK >gi|289774778|gb|GG745513.1| GENE 246 276508 - 277851 1427 447 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 8 445 7 442 446 427 52.0 1e-119 MSANHAAFNLIFRFVENYISPIAGRISSQRHVMAIRDGFISAMPFMIVGSFLLVFAYPPF SPDTTWGFARAWLDLAKEFEGRILTPFDMTMGIMSIYICAAISYNLGKHYEKSNQLDPFM CAMLSIMAFLLIAAPKTNGTLPVDSLGGTGIFTAILVAIYCVEMMRFLKAHNIGIRLPDQ VPPMIKNSFDLLIPVLVVVLTLYPLSLFIQHHFDMLIPQAIMAIFKPLVSAADSLPAILL AVLIGHLLWFAGIHGAAIVSGMLQMFWLTNLGMNQQALAQGAPLPHIFMEAFWTFFIVVG GSGATMGLVFCYLRSRSAHLRSIGRLSVVPSLFNINEPVIFGTPIVMNPVFFIPFLLAPM VNAVLAWAAMKLDLIGRVISVVPWTAPAPIGGAWALGWDFRAAVLVIVLACVSAIIYFPF FKVYEKQLLAQEAEEAERAEQESQQTA >gi|289774778|gb|GG745513.1| GENE 247 278185 - 278643 486 152 aa, chain + ## HITS:1 COG:STM4549 KEGG:ns NR:ns ## COG: STM4549 COG2606 # Protein_GI_number: 16767793 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 152 258 84.0 4e-69 MSLQSVRQFFAEHAPDIEIIELNQSTATVALAAAAHNVEPGQIAKTLSLKIKDKIVLIVA RGDARLDNKKLKETFGAKARMLSSDEVVTWTGHPVGGVCPFGLENPLAVYCDVSLRHYQE VLPAAGAIHSAVRIEPERLAQLTDATWVDVCL >gi|289774778|gb|GG745513.1| GENE 248 278649 - 279323 170 224 aa, chain - ## HITS:1 COG:STM4548 KEGG:ns NR:ns ## COG: STM4548 COG2197 # Protein_GI_number: 16767792 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 211 1 212 224 155 43.0 4e-38 MEKNSTTRHVAIVEKCVMTEMAWRYIFSREDNSRYHIHLFKNVSMLRAAETSFSWSAIIF SLSGSRSSRAESLLFVHEMARCRPEVQAIILANNESEMHLIGHLMPACLHGILNKSAPRR GLQERLLQLLDNHHLSGSEQFCDREACNDPLSPTEHAILRYMSWGYSLSDIAIQLNRNIK TIRAHKFNAMTKLGVRSDIGLLNAADILLHLPMSGANNAVKQVA >gi|289774778|gb|GG745513.1| GENE 249 279284 - 279955 282 223 aa, chain - ## HITS:1 COG:STM4547 KEGG:ns NR:ns ## COG: STM4547 COG2197 # Protein_GI_number: 16767791 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 213 18 231 241 264 63.0 8e-71 MQSGLKVIFNENLPDYELSFCRSHDELTLLQLRRAVLVVADISGEIAHPRAVCERYYSLM TQYRDIHWVFMVSDSLYPLAVELLIRPESSLISESEPVNRLIEVICAGSRAAEQISRTLF TGDEDSDFASYHSAAMLTLSERKVLRLLAKGWGINQIAALLKKSNKTISAQKNSAMRRLS LRSNAEMYAWINSVQGMQELNINSAYGEQMEWKKIAQPAMSPS >gi|289774778|gb|GG745513.1| GENE 250 280271 - 281152 602 293 aa, chain - ## HITS:1 COG:PA0248 KEGG:ns NR:ns ## COG: PA0248 COG2207 # Protein_GI_number: 15595445 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 7 286 8 286 288 278 49.0 1e-74 MPPMQVVPVFKLYGEERGWPTPDLLHCESILQRSSLYEWHIRVHQHAEMVQLLYLHQGRA EIEIEGATAVMTASCIQVVPALCIHGFHFSPGTQGYVLSLALPLLSRFENQFGRPLDVLS VPQCVPVGRSRGHMHTLFSALREEYCEEHDAREMMLYSLLGTLLVWLNRQCRPAPPTEDK AERKRSMMRHFSRLIESHYRQHLPLAEYAKLIGLSVTHLNYLCREFYGCSALGVLHQRLM LEARRNLQYTRMTVTQLSDYLGFSDAAYFSRFFRRYSGMSPKAFRETIKDNAL >gi|289774778|gb|GG745513.1| GENE 251 281169 - 282353 1305 394 aa, chain - ## HITS:1 COG:PA0247 KEGG:ns NR:ns ## COG: PA0247 COG0654 # Protein_GI_number: 15595444 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 393 1 393 394 571 70.0 1e-162 MKTQVAIIGAGPSGLLLGQLLHNAGIHTVILERQTPQYVLGRIRAGILESGTVDLLREAG VAQRMDAEGLVHHGVEFLFDGQRVPVALSELTDGKSVMVYGQTEVTRDLMAARTASGAPI VYGVSEVAIHDAKSDRPTVTYLSEGETCRLECDFIAGCDGFHGVSRQSIPADILKTYESV WPFGWLGLLADTPPVNPELIYAHHQRGFVLCSQRSLTRSRYYLQVPLSDKVEAWSDERFW QELKSRLPEDLASRLVTGHSLEKSIAPLRSFVVEPMQYGRLFLVGDAAHIVPPTGAKGLN LAASDVNYLWRILREYYHRGRSDLLATYSQLALDRVWKGERFSWFMTRLLHDFPDQNAFD AKMQAADRRYYLGSRAGLTTIAENYVGLPMERVT >gi|289774778|gb|GG745513.1| GENE 252 282635 - 283411 673 258 aa, chain + ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 7 257 26 276 277 446 86.0 1e-125 MQVDRSQQRAITRLCIQCGLFLLQHGAESALVEELSTRLGRALGMDSVESAISSNAIVLT TIKDGECLTSTRKNVDRGINMHVVTEVQHIVILAEHKLLDYRDVEKRFAQIVPLRYPRWL LVIMVGLSCACFCKLNNGGWDGALVSFCASTVAMYIRQVLTHRSMHPQINFCITAFVATT ISGLLLRLPAFASTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLA TCIGVVMAMTVWGLRGWA >gi|289774778|gb|GG745513.1| GENE 253 283402 - 283875 482 157 aa, chain + ## HITS:1 COG:STM4545 KEGG:ns NR:ns ## COG: STM4545 COG3610 # Protein_GI_number: 16767789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 239 86.0 1e-63 MGIISFIFALAEDMLLAAIPAVGFAMVFNAPLRALRWCALLGAIGHGSRMVMMSAGFNIE WATFLAALLVGSIGIQWSRWYLAHPKIFTVAAVIPMFPGISAYTAMISAVKISHFGYSEE MMILLLSNFLKASSIVGALSIGLSIPGLWLYRKRPRV >gi|289774778|gb|GG745513.1| GENE 254 283978 - 284517 496 179 aa, chain + ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 85 153 197 266 346 82 58.0 4e-16 MSSRILTSHFSGLEEFLQQHAALLAKSTDGTVAVFANNAPAFYALTPARLAQLLELEARL ARPGSDIALDPQFFEEPSAAPVAVPMGKFAMYADWQPDADFQRLAALWGIALSQPVTPEE LAAFVAYWQAEGKVFHHVQWQQKLARSVQISRASNGGQPKRDVNSVSEPDSHIPRGFRG >gi|289774778|gb|GG745513.1| GENE 255 284514 - 285257 854 247 aa, chain + ## HITS:1 COG:ECs5321 KEGG:ns NR:ns ## COG: ECs5321 COG1484 # Protein_GI_number: 15834575 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Escherichia coli O157:H7 # 3 247 1 245 245 440 92.0 1e-123 MSMKNVGDLMKRLQKMMPAHIEPAFKTGEELLAWQKEQGRLRSEALERENRAMKMQRTFN RSGIRPLHQNCSFDNYRVECEGQMNALARARQYVEEFDGNIASFIFSGKPGTGKNHLAAA ICNELLLRGKSVLIITVADIMSAMKDTFGNRETSEEQLLSDLSKVDLLVIDEIGMQTESR YEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLLGERVMDRMRLGNSLWVIFNWESYRH RVTGKEY >gi|289774778|gb|GG745513.1| GENE 256 285323 - 285817 614 164 aa, chain + ## HITS:1 COG:no KEGG:KP1_0769 NR:ns ## KEGG: KP1_0769 # Name: yjjA # Def: putative outer membrane protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 164 5 167 167 187 92.0 1e-46 MKSFKNGLLAAFAASAFTLAGAHAASWQDSLNSAASQLSGSSTQAGSGGMSVSSLTSLLS GSSQSLTASSMNNAAGILSYCAQQKLASVTSADNVKNQVLDKLGLSTPEKQKQDTNYLDG LQGLLNSNNGQQLDLNTLGNSSLAKQVKTKACDLVLKQGVNFLS >gi|289774778|gb|GG745513.1| GENE 257 286075 - 288366 2864 763 aa, chain + ## HITS:1 COG:STM4541 KEGG:ns NR:ns ## COG: STM4541 COG1368 # Protein_GI_number: 16767785 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Salmonella typhimurium LT2 # 14 762 1 749 750 1354 86.0 0 MSELLSIALFLASVVLYAWKAGRNTWWFAATLTVLGLFVVLNITLYASDYFTGDGINDAV LYTLTNSLTGAGIGKYILPGVGVGVALVAVFGALGWVLRRRRHHPHHVGYSLAALLLALA SVDASPAFHQISELVKSQSREGDPDFAAYYKEPSKRIDNPQLNLVYIYGESLERTYFDND AFPNLTPELGKIKDQGLDFSNTMQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYENYFVQGANLRFAGKDVFLKSHGFDHLYGAEELKTTVADPAYRND WGFYDDTVLDETWKKFEELSRSGKRFSLFALTVDTHHPDGFISRTCERKRYDVDGKKNLS FSAVSCSQEHIAALIEKIKASPYFKNTVIVVSSDHLAMKNSAWDYLNKHDRSNLFFVLRG DKPQQETLAVKRNTMDNGATVLDILGGDNYIGLGRSSLSGQSLSGIFMNMKEKVLAWKPD VIRLWNFPKEMKNFTIDSQKNMIAFSGSHFRLPLLLRVSNQRVEPLPESEYSAPLRFQLA DFAPRDNFVWVDRCYKMGQLWAPELALSTDWCVSQGQLGGEQKVQHVDKPQWQGKTAFRD TLIDMERYKGNVDTLKVVDNDIRYKADSFVFNVAGAPEEVKQFSGISRPESWGRWSNAQL GNDVKIEYKEPLPEKFDLVITAKAYGPNANKPIPVRVGESEQVLTLANDVTTTTLHFDNP SRSNTLTITPPDPQSTNEGNILGHSPRQLGIGMVEIKVVKSEG >gi|289774778|gb|GG745513.1| GENE 258 288427 - 289365 634 312 aa, chain - ## HITS:1 COG:STM3508 KEGG:ns NR:ns ## COG: STM3508 COG5464 # Protein_GI_number: 16766796 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 3 309 1 299 304 388 61.0 1e-107 MAMKKRMTSTPHDAVFKRFLRHPETANDFLALYLPEAIRQQCDFATLRLQSASFIDEDLR AWYSDVLWSVQTTCGAGYVYVVIEHQSSPDNHMAFRLMRYAIAAMQRHLDAGHKTLPLVV PMLFYHGVTSPYPFSLNWLDEFADPQMAKTLYGCSFPLIDVTVMPDDDIVQHRRVALLEL MQKHIRQRDLSGITESLAAVVMLGYTNRRQLRMLFHYMLQYGNTAEPGVFLRRLARRLPQ YEETLMSIAQKLKQEGRQEGRLEGREEGHQEGLQEGSRREALRIAGSMLQNGLDKEMVQK ITGLSADELQPL >gi|289774778|gb|GG745513.1| GENE 259 289499 - 290509 935 336 aa, chain - ## HITS:1 COG:STM4540 KEGG:ns NR:ns ## COG: STM4540 COG2222 # Protein_GI_number: 16767784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Salmonella typhimurium LT2 # 1 336 8 343 343 592 83.0 1e-169 MLGFNQDEYLTSAREIIAARKQAETVADDIYDSGCSALFFASVGGSLAPMMAINEFAKEL TSVPVYLEQAAELIHRGHKKLNKDAVVVTLSKSGDTKESVAIAEWCKAQGIRVVAITRHA DSPLAAAASWHIPMCHKNGVEYEYMLLYWLFFRVIYRHGEFENYARFASQLELLPENLLQ AKRQFDLQADSIAAQYHDCDYMMWIGGAEMWGEVYLFSMCILEEMQWKRTKSVSSAEFFH GTLELLEKEVPLFLVKGEGKCRALDERVERFAEKITDHLVVIDPRDYPLNGIDDAFRWIM APCVVSTLLVDRLAAHFEHHTGHDLNIRRYYRQFDY >gi|289774778|gb|GG745513.1| GENE 260 290527 - 291588 1363 353 aa, chain - ## HITS:1 COG:STM4539 KEGG:ns NR:ns ## COG: STM4539 COG0449 # Protein_GI_number: 16767783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Salmonella typhimurium LT2 # 1 353 1 353 353 459 70.0 1e-129 MRPTMMTYIREEPACLAQILRGYRQKLAAIETFARQHPVRRILLLATGSSLNAALCARYF FEQRFGVLVDIKEPYNFTHYEAIDPHTDLVVAISQSGKSASTLEAMRKVQASGLPVFALT SDPQSPIARACDGVLDINTGIESVGFVTRGFSATVLNLLLIALIIARQQGKVSEVEEQHY LAEFQRLLAAIPDVIARTSRFIDRYSETLRSGERFVATGYGALVGVAKEFETKFTETVRV PSSGFELEAYMHGPYLEANARHVMLFIEDAPDARTRALRDYMAPSIARAFTLTLSDAEDA QTLALNCPCEHHLAPLLLIVPVQMLAWHTAGLKGIDLAKRIFDDFDRVLKSKI >gi|289774778|gb|GG745513.1| GENE 261 291601 - 292452 1243 283 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 14 283 7 278 278 472 87.0 1e-133 MTTKTISEETLQPQEQEETQITPRDLRRVFWRSFQMEFSWNYERQMNLAFVYALIPVLKK LYPRKEELARALKRHLVFFNTTPHIVTLLLGITTAMEEKNSQQKNMDATAIDNVKASLMG PLAGLGDSFFWGTLRLIATGIGTSLALKGNILGPILFLLVFNVPHILVRWCFTRWGYVLG TGVLQRIQKSGMMESLTYGASIIGLMVVGAMTASMIDITIPLSFGAGEAKTQVQDIINDI LPCMLPLVSFGIVYWLLGRKVKPLSIIGGMALVGILGSWIGLF >gi|289774778|gb|GG745513.1| GENE 262 292430 - 293209 1022 259 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 259 1 259 259 351 83.0 7e-97 MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDVQTGVIMGATLELAFIGSF SVGASIPPDVVTGGILGVAFAITSGAGTETALLLGLPIATLTLILKNVYLGMFIPMLSQK ADGYAERADTRGIERMHLIAGFGLSLMLATVVTVSFLVGSNAVKSLLDTIPEFIKHGLSV ATGMIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNVTAL NSPRTTTEQGVSDDDEDDF >gi|289774778|gb|GG745513.1| GENE 263 293226 - 293696 343 156 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 152 1 152 153 231 77.0 3e-61 MITLLRVDHRLLHGQVAFSWTQYVSADCILIANDSVPEDELRKTTIKLAKPPSVKLVIKN INDAIEAIKSGVTDKYNLFIVVESVNDAWRIACAIGEIKSINLGGIKAKEGSKNISKAIN LLPTEIEQLQQLVGKGVEVEIRQVPNDRKQLFTECV >gi|289774778|gb|GG745513.1| GENE 264 293711 - 294133 354 140 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 140 1 140 140 196 68.0 1e-50 MKRHYIFASHGTFANGLLNSVELILGKQPDIHTLCAYVEEESDLTQQVEALLARFPAQDE LIVITDIFAGSVNNEFVRFLSRPHFHLLSGLNLPLIIDLLISAAEENTEKLITEALTSAK ESIQYCNQTIASAMTMDKDF >gi|289774778|gb|GG745513.1| GENE 265 294233 - 296998 2812 921 aa, chain - ## HITS:1 COG:STM4534_1 KEGG:ns NR:ns ## COG: STM4534_1 COG1221 # Protein_GI_number: 16767778 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 698 73.0 0 MRKTELLAFLQNQTDFFDPDNLSEVFTAGYLAQRFAMQRNTASHYLNQLVAQDVLVKINT RPVYFLHKAAFCQQFFPLSRSEYASMAELLAESDRQPEQADHFSLLTGHDGSLRKPIEQM KTALFYPNGGLPLLIVGDSGTGKSYMAELMHEFAIAQGLLPPDAPFVSFNCAQYASNPEL LAANLFGYVKGAFTGAQSDKAGAFEAANGGVLFLDEVHRLDAQGQEKLFTWLDRKEIYRV GETAQGMPISLRLVFATTEDIHSTFLTTFIRRIPILVSLPDLQTRSRHEKDALTLQFFWQ EARTLATRLQLTPRLLQVLTHYVYRGNVGELKNVVKYTVASAWARCPGSEMLTVTLHDLP ENIMAATPALSEAMGQQEPLLIEPQTSLVWLLRARDPIQGLIYDTQCRVLALYEAVQSKK TLWEEAQKSMGEEIETLFDRLIFDNHDANSSHMLLLITHQVREEFYRLEKRFNIQFNGNC IYALSHYLIHRSRQGPSTMSNEKSRLLEDFLAQKYPLLYRFCEEILAALALKLDIEPRRI DLLLLVLWLHKNGAISQQQVTRAIILAHGYATASSIANVANRLLKSQLFESFDMPLDVTP EAIANQVMAWIESHALASGLIILVDMGSLNAIHRHFNRRLSTPMAIINNVSTGMAMYVGE RILQGVMLEDIVRDIGDDLAVEHQLYYPQTDKPRAILTTCATGLGAAANLSALLKASIPE ALGIDIVACDVETLANPARRQPMLSRYEVLAIVGTLDPQLADLPWISLDSLISGQGSRPL MRIFGELASSEQVSEINNLILKNFSLRRVIESVTILDTAKVINQVEQFLLRYEHLAGCDV PNDRKVALYVHISCLIERLIRNASPSHYSGRQCPQSELATLREAFSVIESGYSVKIPVVE LCYIHDILTRETEFIQEDQEF >gi|289774778|gb|GG745513.1| GENE 266 297133 - 298578 1533 481 aa, chain - ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 481 1 482 483 693 68.0 0 MKSLNRQDFPGPQYPTRAIQFGEGNFLRAFIDWQLDLLNEQTDLAAGVTIIRPINTAFPP SLNTQDGLYTTIIRGLNERGEAVSESRIIRSVNNELNPWQDFASYLALARNPAIAFVFSN TTEAGISYHAGDRLDDKPPVSFPAKLTQLLLERFRHFNGAADKGWTIIPCELIDYNGEAL KALVLRYAKEWQLPAAFRDWVETANTFCSTLVDRIVTGYPRDEAEKLEAELGYHDAFLDT AEYFWLFVIQGPQALAETLRLDRYPLNIRIVEDIRPYKARKVAILNGAHTALVPVAWLCG VDTVGEAMQDEAIRHYVQQTIDEEIIPALDLPAEELRQFADAVTGRFLNPYIRHQLLAIA LNGMTKFRTRILPQLLTTIRQHGAIPPRLTFALAALIAFYRGQRDGQVYPLQDDDVWLTR FSQGWKQVANGSPLHGLVLEVLQDNAHWGEDLTAIPGLSDQVTRYLEMILRSGMREALAR L >gi|289774778|gb|GG745513.1| GENE 267 298590 - 299612 728 340 aa, chain - ## HITS:1 COG:yjjN KEGG:ns NR:ns ## COG: yjjN COG1063 # Protein_GI_number: 16132179 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 340 6 345 345 566 82.0 1e-161 MTSMNTLVCQEPKKLHWEKRQIPIPGDDEVLIKIKAVGICGTDIHAWGGNQPFFSYPRVL GHEICGEIIGLGKNILNLKSGQQVAVIPYVACRQCPACLNGRTNCCEKISVIGVHRDGGF SEYLCVPVNNLLVVDDVDPEAVALIEPFAISAHAVRRAAIRAGEQVLVVGAGPIGLGAAA IAKADGAQVVVADTSPARRDHVAQHLGLTTLDPSDPLFIEQLSATFGGSLAQKVIDATGN QQAMNNTVNLIRHGGSIIFVGLFKGELQFSDPEFHKKETTMMGSRNATEEDFAKVGRLMA EGKITARMMLTHRYDFRSLADIYESDVINNRQLIKGVIHF >gi|289774778|gb|GG745513.1| GENE 268 299750 - 300664 792 304 aa, chain + ## HITS:1 COG:ECs5317 KEGG:ns NR:ns ## COG: ECs5317 COG1802 # Protein_GI_number: 15834571 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 37 304 1 268 268 423 82.0 1e-118 MSRSQNLRHNVINQVINDMARGFIPSPLPSQSALAEMYNISRTTVRHILCHLCERGVLSQ VNHDYQILRQPEVQDGFDGSSASLTEQNRLFEQAFFTMINQRQLRAGERFSELQLARAAG VSPVVVREFLLKFSRYNLIESEKRGQWNMKKFEQSWAEQLFELREMLETHALQHFLNLPD SDARWLQAKTLLERHRTLRDSIGNSFRMFSQLDRDFHSLLLSAADNIFFNQSLEIISVIF HFHYQWDESDLKQRNIIAIDEHMTILSALICRSDLDANLALRNHLNSAKQSMINSLKQSE SLAH >gi|289774778|gb|GG745513.1| GENE 269 300844 - 302205 1501 453 aa, chain + ## HITS:1 COG:yjiZ KEGG:ns NR:ns ## COG: yjiZ COG0477 # Protein_GI_number: 16132177 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 453 1 453 453 800 88.0 0 MESQNITIDPQTDFKKGEAETLSVPLENTLQRSSRIKNIQTTAMILLFLAAVINYLDRSS LSVANLTIREELGLTATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRIMLGLGMFFWSLF QAVSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVA ISPPILAAMMLMMGWRWMFITIGVLGIFVAIGWYMLYRNREDIPLTAEEQAYLNAGSVNV RRDPLSFAEWRSLFKNKTMWGMMFGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGFMAA IPFLFGAAGMLINGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPHATTSIAAVL LIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPVVTGFIVDTTHS FQLALVICGCVTALGALAYIFLVRQPISDPRND >gi|289774778|gb|GG745513.1| GENE 270 302209 - 303045 750 278 aa, chain - ## HITS:1 COG:TM1178 KEGG:ns NR:ns ## COG: TM1178 COG0456 # Protein_GI_number: 15643934 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Thermotoga maritima # 3 140 1 138 279 71 30.0 2e-12 MELTAVPATQFSSVQLTDILNACFEAYLVPVTQSVAGFVQRFSAEGMSLIDSRVWLAGDE PAAIAIVARRGSAARLAAFALRPAWRGKGLGRELMQDLLMLLQQQGVETVSLEVIRDNHA AVALYQTLGFTRRYGLCGYLSNEPLAPVAGVLQLYPTLALLRRAIDESNSQLPWLLDPLT FATLPCQVVTLEQRAFAVLTTAGSRPVLQFLWVEPAARRQGLARELLVTLAQQLPGVGTS VTVPETFTPLFAAAGYAPLSLQQYEMSATMNALRSAGR >gi|289774778|gb|GG745513.1| GENE 271 303078 - 303611 534 177 aa, chain + ## HITS:1 COG:PA2271 KEGG:ns NR:ns ## COG: PA2271 COG0454 # Protein_GI_number: 15597467 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 12 177 5 171 171 133 46.0 2e-31 MKTNTITAGAVLRLTQESDIALLPAIERSAAQAFRQIPSLAWLADSEVISVARHHDYLET EHSLLAEAAGQPIGFILTEPLDDALFIVEVAVHQDWQHQGIGRMLLKQVIEGAQQMGYPA VTLTTFREVPWNAPFYTRLGFTMLDELTLPAGLAAKREQETRHGLPPESRCAMRLSL >gi|289774778|gb|GG745513.1| GENE 272 303640 - 304650 1091 336 aa, chain - ## HITS:1 COG:PA1252 KEGG:ns NR:ns ## COG: PA1252 COG2055 # Protein_GI_number: 15596449 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Pseudomonas aeruginosa # 4 334 2 332 334 422 65.0 1e-118 MESVTLSLPEAYDLALEVLSANGFSADHAAAIARNVTAGERDGCASHGLWRLLGIVDTLR KGKVSPDAEPQIHDQAPAIARADAGGAFSLLAYERALPLLLEKARQNGIAALAINRCVHF SALFADIEPLTEAGLVGLACTPSHAWVAPAGGTRPLFGTNPIAFGWPRRDKPPFIVDMAT SAAARGEIQLHQRAGKALPQGWGIDSQGQPTTDAAEVLNGAMLTFGGHKGSALAAMVELL AGPLIGDMTSAESLAWDNGAGGLPYGGELILALDPQRFLGAQAQEQLARAETLFNAMQDQ GARLPGERRFACRQQSEQQGVTISRSLHDEICALRP >gi|289774778|gb|GG745513.1| GENE 273 304662 - 306263 2197 533 aa, chain - ## HITS:1 COG:BS_yveA KEGG:ns NR:ns ## COG: BS_yveA COG0531 # Protein_GI_number: 16080500 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 13 531 1 520 520 553 58.0 1e-157 MTIHTTHNSQTRVAESGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVASIAGPAGIASW VIGGFAVLLLGIVYCELGAALPRAGGIIRYPVFSHGELMGYLLGFITLIAFSSLISIEIV AARQYAAAWFPALTQPGSSSPTLLGWVVQFLLLCFFFALNYYSVKTFARSNNFISVLKFL VPLLVVVTLFAFFKPENLHAQGIAPFGMSGVEAAISAGGIIFAYLGLTPIISVASEVQKP QRTIPIALILSVVLSTIIYVLLQLAFLGSIPTEMLSGGWAEVSKQFSLPYRDIAITLGMG WLAFMVISDAIISPSGTGNIYMNATPRVIYGWAKAGTFFKAFTHIDKASGIPRPALWLTF GLSIFWTLPFPSWEQLISVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFRVRAFGIIGPV SFMISALIVYWSGWNTLSWLLGLQIVMFVVYVMCKGKVPEHTVSLAQQVKSSLWLIVFYA LIILFSWLGSFGGLNVIGHPWDTVLVAAMSLGIYYWGARSCLPQANFSGDEEE >gi|289774778|gb|GG745513.1| GENE 274 306279 - 307883 1824 534 aa, chain - ## HITS:1 COG:PA2217 KEGG:ns NR:ns ## COG: PA2217 COG1012 # Protein_GI_number: 15597413 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 9 531 6 527 527 537 60.0 1e-152 MNASQTMAGRQFIAGRRIASGEATLLSLRAVDGEATGHRFYPASCEEAAQAAEAAQEAFA VYSQTTPQQRARFLNAIADELDALGEPFFAIAGQETALPLARLQGERARTSGQLRMFAGV IQRGDTFAARIDTALADRQPLPRPDLRQYQQALGPVAVFGASNFPLAFSTAGGDTASALA AGCPVVVKAHPGHMATAELTAEAIVRAVVRCGLPGGVFNMIFGTDIGAELVRHPAIQAVG FTGSLAGGKALYQLAQQRPQPIPLFAEMSAINPLIILPQALQTRAEALANELVASFTLGG GQFCTRPGLILALRGAGLERFKSALCAAVAGSTPQVLLNAPTLQHYRQGVAALAAHPRIE KLASGIAAGAGQAQTLLWQAQVEDLLAQDTLLQSEVFGPLSLLVEVDDEAQLQAVVKALQ GQLTATVHAEADDGPLAASLLPLLCEKAGRVLFNGYPTGVEVCDAMVHGGPWPATTDARG TSVGSRAIERFLRPVCLQNAPAALLPPALQDANPLNLLRLVNGQWTREAISSSH >gi|289774778|gb|GG745513.1| GENE 275 307898 - 308818 1353 306 aa, chain - ## HITS:1 COG:PA1254 KEGG:ns NR:ns ## COG: PA1254 COG0329 # Protein_GI_number: 15596451 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Pseudomonas aeruginosa # 4 306 3 305 305 484 75.0 1e-137 MSKKAIHWSGVFPAVSTQFRSDYSLDLDATHAVMKNLVKDGVSGLVVCGSVGENTSLSTD EKLQIIEVAKDAAGGKIPVIAGVAEFTTAFAQKMAKEAERVGVDGIMVMPALVYSSKPHE TAAHFRSVASATDLPIMVYNNPPIYKNDVTPDILATLTDCDNIVCFKDSSGDTRRFIDLR NTVGDRFVLFAGLDDVVVESIAVGAEGWISGMSNAFPREGETLFRLARQQRYEEAMALYR WFMPLLHLDARPDLVQCIKLCEELLGRGSAITRPPRLALEGETRQQVVAIVEQALATRPT LPDVGL >gi|289774778|gb|GG745513.1| GENE 276 308970 - 309794 979 274 aa, chain - ## HITS:1 COG:PA1261 KEGG:ns NR:ns ## COG: PA1261 COG2207 # Protein_GI_number: 15596458 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 55 271 1 217 224 292 64.0 6e-79 MIGVSDAAPPRAVNQPELAVDELSQICEGLARQRPENMPALLNALALIAPLLNAIPNVVF FIKDRQARYLLANLTLARRCGFKSVSSLLGKTSADVFPSALGQGYTEQDLRVLREGVTLR DQLEMHLYNGRERGWCLTQKLALRDVRGQVIGMAGISHDLQEAHARHPAWQRLAIVDDHI RRHYHRPIAMEELTALSGMSIAQIERYCKRIFHLTPRQMIHKVRLEKATELLAGDTPITD IALQCGYTDHSAFSRQFKAMTGSTPRDFRLTLLG >gi|289774778|gb|GG745513.1| GENE 277 310105 - 311052 825 315 aa, chain + ## HITS:1 COG:PA1268 KEGG:ns NR:ns ## COG: PA1268 COG3938 # Protein_GI_number: 15596465 # Func_class: E Amino acid transport and metabolism # Function: Proline racemase # Organism: Pseudomonas aeruginosa # 10 313 4 312 314 397 66.0 1e-110 MTAPRPPVTLRAIDSHTGGEPTRLIVDGFPDLGGGSMAKRRDRFARDFDHWRQAAILEPR GNDVLVGALLCKPVSAEATAGVIFFNNAGFLNMCGHGTIGLIASLAWLGRIQPGVHLIET PVGDVSATLHDDGSVSVQNVPARRWKKQIRVETAHGPVIGDIAWGGNWFFLINDHPFAIT PEHIPQLTAYAWAVREGLEAAGIRGDDGGVIDHIELFADDDTADSRNFVLCPGKAWDRSP CGTGTSAKLACLAQDGKLQPGEIWRQASIIGSQFTASYQRTAEGIIPTIRGEAWVCGDNQ LILNPDDPFCWGIAP >gi|289774778|gb|GG745513.1| GENE 278 311049 - 312158 1077 369 aa, chain + ## HITS:1 COG:PA1267 KEGG:ns NR:ns ## COG: PA1267 COG0665 # Protein_GI_number: 15596464 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 5 369 4 369 371 346 53.0 4e-95 MKQCDVIVIGAGIIGAACAWQLAKRGQSVTLIDDGQPGATAAGMGHLVCMDDDPAELALS AWSLERWRAITPRMPDHCAWRGCGTLWLAESEEEMAVAGDKQRRLASYQVPSERQTPQQI AGREPLLRGGLAGGLWVPGDGIVYAPNVARWLMADAGDHLTCLHDSAQAITEPQVLLASG KRLQARAIVVACGLEANALLAENWLRPKKGQLAITDRYRPRVHHQLVELGYGASAHGGGT SVAFNLQPRPTGQLLIGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWSGL RAASQDGNPLIGPHPTRRGVWLALGHEGLGVTTAPATAELLAAQILDERCPLAPDAWLPA RLCQQEAIA >gi|289774778|gb|GG745513.1| GENE 279 312155 - 312418 295 87 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4460 NR:ns ## KEGG: Kvar_4460 # Name: not_defined # Def: ferredoxin # Organism: K.variicola # Pathway: not_defined # 1 87 1 87 87 146 95.0 3e-34 MKATLTITIDGEALTVPEGISVAAALALTGDPTTRQAVNGELRAPFCGMGVCQECRVTVD GLRVLACQTLCRAGMQIERSHDEHAAL >gi|289774778|gb|GG745513.1| GENE 280 312399 - 313661 1376 420 aa, chain + ## HITS:1 COG:PA1266 KEGG:ns NR:ns ## COG: PA1266 COG0446 # Protein_GI_number: 15596463 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 7 410 6 409 417 296 50.0 5e-80 MNTLRCDILILGAGPAGMAAALSAAACDKQVIILDDNPAPGGQIWRAGPQATQPALARRY RDAIAASAAIRVVNGARLIARPSAHSVLFETADGGGVVCWQKLILCCGARELSLPFPGWT LPGVTGAGGLQAQIKQGLSLKGEKVVIAGSGPLLLAVADTVNKAGGDVTNIIEQAPLPAL LRFASGLWRWPQKLRQLATLAPKGYLSGAQAIRAHGTTRLEAVTLRQRGVERTIACDRLA IGYGLIPNIETGLLFGCATAQEAIQVNRWQQTSVADIYAAGECTGFGGSELALAEGEIAG YAAAGASQQAQALFTRRARWQRFAEAINRTFRLTESLKDAATPESLLCRCEDVRCGDVAA AGGWPQAKLTQRCGMGACQGRTCAASARWLYGWPLPQPREPLAPARAETLIALARPSAEP >gi|289774778|gb|GG745513.1| GENE 281 313665 - 314105 514 146 aa, chain - ## HITS:1 COG:STM1100 KEGG:ns NR:ns ## COG: STM1100 COG1846 # Protein_GI_number: 16764458 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 124 1 124 146 189 81.0 1e-48 MHDSLTIALLQAREAAMAYFRPIVKRHNLTEQQWRIVRILAERPSMDFHDLAFRACILRP SLTGILTRMERDGLVLRLKPVNDQRKLYVSLTPAGTALYESAQAEVEETYRLLEAQFTTE KLQQLTSLLEEFIALGVPAGRGDEEE >gi|289774778|gb|GG745513.1| GENE 282 314393 - 315025 823 210 aa, chain + ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 1 210 1 210 429 342 80.0 3e-94 MKGTIFAVALNHRSQLDAWREAFQQAPYKTPPKTAVWFIKPRNTVIGDGEAIPYPQGETV QSGATLALIVGKTARKVAAAEAANYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPVGA LSAVRNVDNLTIITEINGREADSWHTGELQRNAAQLLSALSEFATLNPGDAILIGTPHSR VTLRPGDRVRILADGFPALENPVVAEGELA >gi|289774778|gb|GG745513.1| GENE 283 315022 - 315786 1100 254 aa, chain + ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 36 248 215 427 429 344 86.0 8e-95 MKQARIEWQGQVRDVLVDERDQVRLNDGTVLKEGEFRWLPPADGTLFALGLNYADHASEL EFKPPTEPLVFIKAPNTFIGHQQQSVRPDNVEYMHYEAELVVVIGKTARRVSEAEAMDYV AGYTVCNDYAIRDYLENYYRPNLRVKSRDTLTPIGPWIVAKEAIPDPHNLALRTWVNGEL RQQGTTADLIFSIPFLIAYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVIVEVEGVGRLV NHIISQQAYEETLS >gi|289774778|gb|GG745513.1| GENE 284 315783 - 317249 1999 488 aa, chain + ## HITS:1 COG:STM1102 KEGG:ns NR:ns ## COG: STM1102 COG1012 # Protein_GI_number: 16764460 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 488 1 488 488 988 98.0 0 MKKINHWINGKNVAGADYFHTTNPATGEVLAEVASGGEAEINQAVAAAKEAFPKWANLPM KERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNG KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE RANRLRVGDPTDPNTQVGALISKQHWEKVSGYIRLGIEEGATLLAGGADKPSDLPAHLKA GNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVS KVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD HPIPKWGV >gi|289774778|gb|GG745513.1| GENE 285 317251 - 318108 1211 285 aa, chain + ## HITS:1 COG:STM1103 KEGG:ns NR:ns ## COG: STM1103 COG3384 # Protein_GI_number: 16764461 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 590 97.0 1e-169 MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEIGKRCREMGVDTIIVFDTHWLV NSAYHINCADHFQGVYTSNELPHFIRDMTYDYDGNPELGQLIADEAVKLGVRAKAHNIPS LKLEYGTLVPMRYMNSDKHFKVVSISAFCTVHDFADSRRLGEAILKAIEKYDGTVAVLAS GSLSHRFIDDQRAEEGMNSYTREFDHQMDERVVKLWREGKFKEFCTMLPEYADYCYGEGN MHDTVMLLGLLGWDKYDGKVEFITELFASSGTGQVNAVFPLPAQA >gi|289774778|gb|GG745513.1| GENE 286 318118 - 318498 685 126 aa, chain + ## HITS:1 COG:STM1104 KEGG:ns NR:ns ## COG: STM1104 COG3232 # Protein_GI_number: 16764462 # Func_class: E Amino acid transport and metabolism # Function: 5-carboxymethyl-2-hydroxymuconate isomerase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 236 89.0 7e-63 MPHFIAECTDNIREQADLPGLFAKVNEALAATGIFPIGGIRSRAHWLDTWQMADGKQDYA FVHMTLKIGAGRSLESRQDVGDMLFALIKAHFAALMESRYLALSFAMEELDPTLNYKQNN VHALFK >gi|289774778|gb|GG745513.1| GENE 287 318607 - 319410 1196 267 aa, chain + ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 535 96.0 1e-152 MLDKQTRTLIAQRLNQAEKQREQIRAISLDYPSITIEDAYAVQREWVEMKIAEGRVLKGH KIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGP NCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP DELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGAISCRFV >gi|289774778|gb|GG745513.1| GENE 288 319421 - 320218 1165 265 aa, chain + ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 250 1 250 263 436 90.0 1e-122 MNNAFKEALKAGRPQIGLWLGLCSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAI APYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNAEEARLAVSATRYPPAGIRGVGS ALARASRWNRVPDYIHQANDAMCVLVQIETREALKNLPQILNVDGVDGVFIGPADLSADM GHGGNPQHPEVQAAIEDAIQQIRQAGKAPGILMANEQLAKRYLELGALFVAVGVDTTLLA RGAEALAARFTHTATTTTDNNKSVY >gi|289774778|gb|GG745513.1| GENE 289 320240 - 321598 1979 452 aa, chain + ## HITS:1 COG:STM1107 KEGG:ns NR:ns ## COG: STM1107 COG0477 # Protein_GI_number: 16764465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 17 434 25 449 458 580 71.0 1e-165 MTTSTLQHNDNKAVEVENRVIKKLFRRLITFLFVLFVFSFLDRINIGFAGLTMGKDLGLT STMFGLAATLFYVTYVLCGIPSNIMLAKVGARRWIAGIMVVWGIASTCTMFATSPHTLYI LRMLVGIAEAGFLPGILVYLTWWFPAYHRARANALFMIAMPVTMMLGSILSGYILALDGL WNLKGWQWLFLLEGLPSVVLGVVTWFFLNDTPDKANWLDNEEKQALKTMIDREREHAAIV PASPRSTLREVLTPAVLMYTLAYFCLTNTLSAINIWTPQILQSFNTGSSNIMIGLLAAIP QFCTIFGMIWWSRRSDRRKERKMHTILPYLFAAAGWLLASATHHSLIQLIGIIMASVGSF TAMAIFWTTPDRVISLQSRAVALAVINAIGNVGSAVSPLLIGILRDTTGSFSSGLWFVAG LLIVGALVLTRIPMSQREDAAAAPGLAAQKGH >gi|289774778|gb|GG745513.1| GENE 290 321608 - 322498 1113 296 aa, chain + ## HITS:1 COG:STM1108 KEGG:ns NR:ns ## COG: STM1108 COG2207 # Protein_GI_number: 16764466 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 294 1 294 298 525 85.0 1e-149 MCQHSIANIDINKDYDESLGTEEVHYQSFSRMAAFFGRDMQAHRHDRYFQMHYLDTGQIE LQLDDHRYSVQAPLFVLTPPSVPHAFITESDSDGHVLTVHEELIWPLLEVLYPGTRETFG LPGICLSLADKPDELAALAHYWQLIRRESTAQLPGREHTLALLAQAVFTLLLRNARLDDH AASGMRGELKLFQRFNQMIDSHYHQHWTVPDYARELHLTESRLTDICRRFANRSPKRLIF DRQLREAKRLLLFSDSAVNEIAWQLGFKDPAYFARFFSRQVGCSPSSYRAQKVPVS >gi|289774778|gb|GG745513.1| GENE 291 322724 - 324286 2262 520 aa, chain + ## HITS:1 COG:STM1099 KEGG:ns NR:ns ## COG: STM1099 COG2368 # Protein_GI_number: 16764457 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 1077 97.0 0 MKPEDFRADAKRPLTGEEYLKSLQDGREIYIYGERVKDVTTHPAFRNAAASVAQLYDALH KPEMQDSLCWGTDTGSGGYTHKFFRVAKSADDLRQQRDAIAEWSRLSYGWMGRTPDYKAA FGCALGANPAFYGQFEQNARNWYTRIQETGLYFNHAIVNPPIDRHKPADEVKDVYIKLEK ETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENPDFALMFVAPMDAEGVKLISRAS YEMVAGATGSPYDYPLSSRFDENDAILVMDKVLIPWENVLIYRDFDRCRRWTMEGGFARM YPLQACVRLAVKLDFITALLKRSLECTGTLEFRGVQADLGEVVAWRNMFWALSDSMCSEA TPWVNGAWLPDHAALQTYRVMAPMAYAKIKNIIERNVTSGLIYLPSSARDLNNPQIDQYL AKYVRGSNGMDHVERIKILKLMWDAIGSEFGGRHELYEINYSGSQDEIRLQCLRQAQSSG NMDKMMAMVDRCLSEYDQNGWTVPHLHNNADINMLDKLLK >gi|289774778|gb|GG745513.1| GENE 292 324306 - 324818 667 170 aa, chain + ## HITS:1 COG:STM1098 KEGG:ns NR:ns ## COG: STM1098 COG1853 # Protein_GI_number: 16764456 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Salmonella typhimurium LT2 # 1 170 1 170 170 289 84.0 2e-78 MQLDEQRLRFRDAMASLSAAVNVVTTAGEAGRCGITATAVCSVTDTPPSVMVCINANSAM NPVFQGNGKLCINVLNHEQEIMARHFAGMTGVTMEERFALSGWQQGALGQPVLKGSLASL EGEISQVQTIGTHLVYLVEIRNITLSPQGHGLIYFKRRFHPVMMEMEVAV >gi|289774778|gb|GG745513.1| GENE 293 324893 - 325603 292 236 aa, chain - ## HITS:1 COG:no KEGG:KP1_0732 NR:ns ## KEGG: KP1_0732 # Name: not_defined # Def: ascBF operon repressor # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 236 38 273 273 459 99.0 1e-128 MTLSDHQRAKSALNANDLNAAQGYLTGEKYNNRYRPVSGEESWGSLQYRAAKIVANAAAN GQKVRDDALYLAYISLFEAEEGVPERPDIMLGYMHKAMALLLANSQLLDKIDSKNVSTLP SQFTLERYAVWQYLYDGGEIDWTKKAPEGEGYTIAGESYQTWNIKLKKAIWNRGDAFLTN IGKQQFIHDAIDYSQFPVIACTARRKGWHLTLPADYREQNFRGGGRFDWASCRAVE >gi|289774778|gb|GG745513.1| GENE 294 325731 - 326354 139 207 aa, chain - ## HITS:1 COG:no KEGG:KPK_4844 NR:ns ## KEGG: KPK_4844 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 207 1 207 207 396 99.0 1e-109 MKFVKIMIVASAFYLTFAHAREIHQAVDEPAAPYNLRWGMSYDEARNTPLYSLEVSDINY AGKDPDLIISTLTPQEVGALKYQEMKLYFDKNKGLKSVFVSADVDSSQQAYKVDDGREAL ALYNEEVKVLDREYGPATIKEEFIADKGKFYQSLSACIAKQQEWYSKRLDLNKITNCSTW QRTYKKGRVTVLLYIEPRQVSKHYIYK >gi|289774778|gb|GG745513.1| GENE 295 326739 - 328889 3372 716 aa, chain + ## HITS:1 COG:ECs5313 KEGG:ns NR:ns ## COG: ECs5313 COG1966 # Protein_GI_number: 15834567 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 716 6 721 721 1280 93.0 0 MDTKKLFKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQ KVMKLDPTRSTPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTL WLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKQEMGPVPGSIALFGCFLIMIIILAVL ALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIWFGGI IAHDPYWGPALTFKDTTITFTLIGYAFISALLPVWLILAPRDYLATFLKIGVIVGLALGI VILNPDLKMPAVTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALIASGTTPKLLANET DARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGIVMPNLHEMGGENAAMI AAQLKEVTVHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKI IPMADMGFWYHFGILFEALFILTALDAGTRAGRFMLQDLLGNFVPFLKKTDSLVAGIIGT AGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLVKMQRTKYIWVT VIPAAWLLLCTTWALGLKLFSSNPQMEGFFFMAQQYKEKIAAGGELTAQQIANMNHIVVN NYTNAGLSILFLVVVYSIIFYGIKTWLNVRNNKVRTDKETPYVPVPEGGVKTSSHH >gi|289774778|gb|GG745513.1| GENE 296 328999 - 329202 300 67 aa, chain + ## HITS:1 COG:ECs5312 KEGG:ns NR:ns ## COG: ECs5312 COG2879 # Protein_GI_number: 15834566 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 67 1 67 67 122 91.0 2e-28 MFGNLGQAKKYLGQAAKMLIGIPDYDNYVTHMQTNHPDQPYMTYEEFFRERQQARYGGDG KGGVRCC >gi|289774778|gb|GG745513.1| GENE 297 329214 - 330170 1288 318 aa, chain + ## HITS:1 COG:STM4530 KEGG:ns NR:ns ## COG: STM4530 COG0523 # Protein_GI_number: 16767774 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Salmonella typhimurium LT2 # 1 318 1 318 318 588 92.0 1e-168 MAPIAVTLLTGFLGAGKTTLLRHILNEQHGFKIAVIENEFGEVSVDDQLIGDRATQIKTL TNGCICCTRSNELEDALLDLLDSRDRGEIEFDRLVIECTGMADPGPIIQTFFSHEVLCER YLLDGVIALVDAVHADQQMDQFTIAQSQVGYADRILLTKTDVAGDTEKLRERLARINARA PVYTVIHGDIDLSQLFNTSGFMLEEKVVSATPRFHFVAEKQNDVSSIVVELDYPVDISEV SRVMENLLLSFAEQLMRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDETPHSTLVFI GIQLPEEEIRAAFAGLRR >gi|289774778|gb|GG745513.1| GENE 298 330564 - 331109 766 181 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4483 NR:ns ## KEGG: Kvar_4483 # Name: not_defined # Def: YfaZ family protein # Organism: K.variicola # Pathway: not_defined # 1 181 1 181 181 308 100.0 5e-83 MKKLNILIVAALTAVSGSAMAMGFTVEQGKNFTNLNMEMGKSSSGLYAESHWLKNTDDGS QTGGVGAGYNLEVGPVMLNAGAKAIYLGPKKGDNGVAFPVGGGVNVALTDSIHVFGEGYV APDGLNNSVKNYVEANGGVSWSPIGPVTLKVGYRHVSVDGKEGRPNHTLIDGAYVGGGVT F >gi|289774778|gb|GG745513.1| GENE 299 331205 - 332575 1860 456 aa, chain - ## HITS:1 COG:STM4519 KEGG:ns NR:ns ## COG: STM4519 COG1012 # Protein_GI_number: 16767763 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 786 86.0 0 MAYQTVNPANNQLIKTYPAHSDADVEAALQQADALYHSAWAKGDIEPRLAVLHKLADLID SRAEELAKIASQEMGKLIKQSRGEVKLCAQIARYYADNAKSLLAPVKYPSELGDAWVEHH PIGVLMAVEPWNFPYYQLMRVLAPNLAAGNPVIAKHASIVPHCAETFAHLVREAGAPEGA WTNLFISQEQVAKIIADDRVQGVALTGSEKAGSVVAAQAAKHIKKSTLELGGNDVFVVLD DADLERAVKIGVQARLNNAGQVCTAAKRFILHENIAESFLAKFSEAFRQVKIGDPLDEST TLGPLSSKDALDTLSKQVDEAVKNGATLHLGGKAVAREGNFFEPTILTGITRDNPAYFEE FFGPVAQIYVVKNDEEAIQLANDSHYGLGGAVFSQDIERAKRMASAIETGMVYINWLTDT APELPFGGVKRSGYGRELSDLGIKEFVNQKLVVVRR >gi|289774778|gb|GG745513.1| GENE 300 332734 - 333648 761 304 aa, chain - ## HITS:1 COG:STM3508 KEGG:ns NR:ns ## COG: STM3508 COG5464 # Protein_GI_number: 16766796 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 304 1 304 304 424 67.0 1e-118 MAKGTTSTPHDAVFKQFLTQADTARDFLAIHLPPALRQRCDLDTLQLESASFIEESLRAW YSDVLWSLKTASGEGYIYVVIEHQSSPDAQMAFRLMRYAIAAMQRHLDSGHTRLPLVVPM LFYHGATTPYPWSLNWLDCFTDPQLARELYISPFPLVDITVIPDDEIVSHRRVALLELIQ KHIRQRDLMNIVGQLTTILLSGDANDRQLKTLFNYLLQTGNARRFGRFIHEVAQRVPQHR ESLMTIAERLQEVGRRKGKREGRQEGQHAEALRIAQRMLDDGIARETVVKITGLAADEIA ALEH >gi|289774778|gb|GG745513.1| GENE 301 333866 - 334681 663 271 aa, chain + ## HITS:1 COG:SMc00558 KEGG:ns NR:ns ## COG: SMc00558 COG2207 # Protein_GI_number: 15964881 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 11 261 23 282 285 89 30.0 7e-18 MNHTRDIPQTFWRDDRLPWLELRSTWRSRQAYKRHSHPQLSVGAIIEGETRCLCNGEEYL LQPGDLIVIPPHAPHSCNPLHDRPRSYHMLYLEAAWCHAQRPDIPPGASIASPQPLLRDS PLFACFQQVVALMSRGSLEQLPARLAQLLHALPLCAAAPQAPHHASALLFQRLATELPAP PSLDKLAHDSALRKETVIRAVKQDTGLTPASLINMARIEYAKTRLRAGDPIADVGYQAGF ADQSHFHKTFVSYTAATPRQYAHSRSISDNK >gi|289774778|gb|GG745513.1| GENE 302 334729 - 335391 670 220 aa, chain + ## HITS:1 COG:BH2932 KEGG:ns NR:ns ## COG: BH2932 COG1280 # Protein_GI_number: 15615494 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Bacillus halodurans # 20 207 10 206 210 80 31.0 2e-15 MHTLSTLFPAAFPALALSHFVALLSPGPDFFLLVGYAVRYRIRGSIGLCLGIAAGNALYI VLAIVGWGLLRQAPLLFLLIELLGAGYLLWVGSLLIRSRPATLAVESIRASRPGFGRQLL LGLGSSLLNPKNALFYLALMTSLLGPAVTLLQQTVSGLWMVSVVFFWDLLLVSAIALPQV QRRLGAIVWRVERAAGAVLMIFGLWIIWRFLHDLAVRLYA >gi|289774778|gb|GG745513.1| GENE 303 335396 - 336676 1694 426 aa, chain + ## HITS:1 COG:STM4516 KEGG:ns NR:ns ## COG: STM4516 COG2733 # Protein_GI_number: 16767760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 423 1 423 423 653 79.0 0 MEKLAELKRAKLLALSLLLIAAALFITTLLLPPTPWVSALKAISEAAMVGALADWFAVVA LFRRIPLPFVARHTAIIPRNKDRIADNLGRFVEEKFLDTPSLVALIRRYEPALMLGNWFS QPENARRVGQHLLQVMSGFLELTDDARIQRLLRRAVHKAIDKVDLTQTSAMMLEGMTRDN RHQKLLDSLISQLIALLQRDNSRAFIARGIVRWLETEHPLKAKLLPTEWLGEHSAEMVTD AVNTLLDEVSHDRTHQIRQAFDHAVQKLIDNLKSDPLMAQKAENIKAYLKNDETFNRYLG EVWGDLRSWVKNDISSDDSRIKQRIAEAGQWFGETLLRDDALRESLNEHLEQAAHRVAPE FAAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRINGTLVGGTIGLMLWLFSQIPSL LHLHIG >gi|289774778|gb|GG745513.1| GENE 304 336733 - 337977 1572 414 aa, chain + ## HITS:1 COG:ECs5300 KEGG:ns NR:ns ## COG: ECs5300 COG0477 # Protein_GI_number: 15834554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 4 413 1 410 410 571 75.0 1e-163 MHRISHWLTRHAAALFFPAALILYDFSAYLTTDLIQPGILHVVRDFNADVALAPASVSLY MAGGMALQWLLGPLSDRIGRRPVLLTGALIFTLACLATLFTTSMTQFLIARFVQGTSICF IATVGYVTVQEAFEEKRSIRLMAVITSVVLVAPIVGPLSGAALMHFIHWKALFGIIAAMG LVAWLGLLLTMPETVRRGDVPFSLPGVLRDFRAVFRNRIFLLGAATLSLSYIPLMSWVAV SPVILMDAGGLTTSEFAWSQVPVFSAVIIANLSVARWVKDPTRPRFVLSAVPIQMLGLAI LIVGNLIWPHVWLWSVLGTCFYAFGIGLIFPTLFRFTLFSNDLPKGTVSASLNIVILSVS ALSIEGARWLWFHGGRLPFHLLAVAAGIVAACCLAGLLRHQRQCGQAVIEARQS >gi|289774778|gb|GG745513.1| GENE 305 338003 - 338242 481 79 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4490 NR:ns ## KEGG: Kvar_4490 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 79 1 79 79 140 100.0 1e-32 MNDIELSPAQRDLLRDKLSKYCEETFNLELEQFDAEFFVDFIAKELGPLFYNAGIEEAIR THLAWSERIQEEMDLKKVY >gi|289774778|gb|GG745513.1| GENE 306 338340 - 339491 1671 383 aa, chain + ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 702 86.0 0 MSLITDLPAIFNQFSEARQKGFLTVMDLKEQNVPLVGTYCTFMPQEIAMAAGAIVVSLCS TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE FKAVHVMQLPNSASDAASRALWKTEILRLQQVIEARFGTPISEAALREAIVLKNRERRAL AHFYRLGQLNPPALSGGDILKVVYGATFRFDKTALIDELHVMADRIHQEWLQGKRLEPRP RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATERCVAEEGDVYDALTDKYLAI GCSCISPNDQRLQLLSQMVEEYQADGVIDVILQACHTYAVESLAIKRHLRQQHDLPYMAI ETDYSTADLGQLSTRVAAFIEML >gi|289774778|gb|GG745513.1| GENE 307 339501 - 340268 637 255 aa, chain + ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 1 254 1 254 255 420 85.0 1e-117 MNYTVGIDSGSTATKGILLADGVIVRRFLCPTPFRPADAIHKAWETLRAGLTETPFLTLT GYGRQLVDFADKQVTEISCHGLGARLLAPDTRTVIDIGGQDSKVIQLDTEGNLSDFLMND KCAAGTGRFLEVISRTLGASVEQLDSITAGVEPHAITSMCTVFAESEVISLRSAGVAPEA ILAGVINAMARRSANFIGRLSAQGPLLFTGGVSHCATFARMLESHVGMAVTTHPDAQFAG AIGAALIGQRQRRRG >gi|289774778|gb|GG745513.1| GENE 308 340265 - 340621 178 118 aa, chain + ## HITS:1 COG:no KEGG:KPK_4859 NR:ns ## KEGG: KPK_4859 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 118 1 118 118 242 100.0 3e-63 MTTFLFLFHSTVGVVRMRKALQAAGMTFEVKDIPRQLRSGCGLCIYLSCIPGDEQRWVIP GETAALFRVAGNDYHLLATYAHRGSPDEALADIRDASPVALTLTGATDKMPNRSPGKA >gi|289774778|gb|GG745513.1| GENE 309 340651 - 341754 734 367 aa, chain - ## HITS:1 COG:BS_amhX KEGG:ns NR:ns ## COG: BS_amhX COG1473 # Protein_GI_number: 16077370 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Bacillus subtilis # 5 358 13 363 389 234 37.0 1e-61 MSRTLEHFNYLHQIPELGFEEYKTSAYIGDALAAAGFRVHRNVGGTTGIVAEIDSGEPGP VVALRADMDALGHIIDGRLEARHTCGHDGHSSVVLTAAEEILAEGLVKRGKLKVLFQPAE ELGTGAIALTEAGVLDDVEMLFGFHLRPLEECPMGQAVPAMYYSASATVMVDFHGKAAHA ARPHLGINALDAASHAVQAVNGIHLAPSLTWSAKATRFLCDAGVTNSVPAKAHVCWDLRC EENDGMATLKERVVRAIESSAAAYGASVDIRVVKEMPAAIIDAEATAIISQAICKTFGEA GLTAAKSTPGSEDFFHYLRLRPAVKGGFWGLGCNLLPGLHHPEMHFERTALADGVRVFKS CVRQLLG >gi|289774778|gb|GG745513.1| GENE 310 341775 - 342242 758 155 aa, chain - ## HITS:1 COG:STM4513 KEGG:ns NR:ns ## COG: STM4513 COG0700 # Protein_GI_number: 16767757 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 4 154 2 152 153 129 48.0 2e-30 MSNSAKVASNPFDIFVIGARKGFNIAINNLMPNVLMAYVIAEMLNLLGVMQLIGQVCAPL MGLFGLPGEAITVLLTSWLSASAGTGVAVSLLSKGTLNVADVTILIPAIFLMGSQLQYMG RLLGVADVPKKYWPLLMAVSIINAVIAMLVMRVMA >gi|289774778|gb|GG745513.1| GENE 311 342235 - 342918 781 227 aa, chain - ## HITS:1 COG:STM4514 KEGG:ns NR:ns ## COG: STM4514 COG3314 # Protein_GI_number: 16767758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 19 217 87 281 294 175 47.0 6e-44 MSENKTLERSSDDATNEWRVGPGAWISLVVVLLVFSGLLFKVEGMAWLGAFDFTTLGGAF GTMKTPETNTFIGSGGISAKAGFLFALSLVPTVMLALGLLEIFTHYGAIRAAHKLLTPLL RPLLGIPGYTGLALITDLQSTDAGAALTKELYDSKKISRKDVVIMGAWQYSGAGLINNYF SIGSALFASLTIPIIIPLLLMFVLKFVGAAITRLVLNTAYKGDFDNE >gi|289774778|gb|GG745513.1| GENE 312 343282 - 344196 894 304 aa, chain + ## HITS:1 COG:PA3778 KEGG:ns NR:ns ## COG: PA3778 COG0583 # Protein_GI_number: 15598973 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 284 4 287 311 125 27.0 1e-28 MLHERPMSYLYEVGIQGGIRRAADILGINPSVISRQIAQLERTLELPLLERQGRNVALTE AGRLLAEDYHESRQRREKLESHLKDLRHMRGGTISVRIGGGLVTTFIESVMSTFSQSWPN VFVDISVGNMQEMLNDIASGEADMAVAFGPIGNPELKRHSFQWGPICAVVSPQHPIARQS MVTIDELTQYRLIALTESFGLQRHMNAMFKTAGRQFHPAYRCNLFSTAMSLSQAGLGISF MTEFAAREAIAHGILKAVPIDHPIASSAQCHLLRNSNRRFPPAAHHMWRLLHNAFRDAQR AMTV >gi|289774778|gb|GG745513.1| GENE 313 344199 - 345263 1526 354 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4498 NR:ns ## KEGG: Kvar_4498 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 354 1 354 354 615 100.0 1e-175 MSINTLAHVFTPHGNIVYTANDFRQTVRIAVAGTIALSISTFYDVQYGVFFVVYPLMLMS LVPVFNRHVARQFVFSAAVNCVEMVLIVGYLSQWPVIMTLVVFALYVMRFRFMSQGPLFL LGSMGVVCQSTMLNFMSYPTSNWHTLMFSNMEACVLAVALSALLHYLIPDVEPRKPPPRI EKDAARIRHESLLSGTVATIIFVVFQICDLSDSLSALMAGILILFPMHYRGAVISSIWRV VGVVLACLYILVVQLIIYDFSNHMILMMPLIGLGLAFSARLHVMEKVGAGVGFASITTIG IMFGQNLHPYQDLVFSDLYRITSVTVSLVVTLTLVFLMHRLLNCFAATRFVVSE >gi|289774778|gb|GG745513.1| GENE 314 345253 - 346320 1478 355 aa, chain - ## HITS:1 COG:PA3360 KEGG:ns NR:ns ## COG: PA3360 COG1566 # Protein_GI_number: 15598556 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Pseudomonas aeruginosa # 2 355 1 352 352 282 47.0 7e-76 MMTPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVY VHNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTA RNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRN VTLQKYRNALEEAQLNLAWTQVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVAD FREKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVR DAQRMRIHVALDQPLAKPLPTGARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY >gi|289774778|gb|GG745513.1| GENE 315 346327 - 346791 682 154 aa, chain - ## HITS:1 COG:ECs2351 KEGG:ns NR:ns ## COG: ECs2351 COG1846 # Protein_GI_number: 15831605 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 11 130 6 125 146 75 35.0 4e-14 MTEDDLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELA EVQGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAEGRAILEKLSCVIETYQER VTQTIPEADLATFSATLNQIACRLRNIREEDNKI >gi|289774778|gb|GG745513.1| GENE 316 346957 - 347121 82 54 aa, chain - ## HITS:1 COG:STM4521 KEGG:ns NR:ns ## COG: STM4521 COG5457 # Protein_GI_number: 16767765 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Salmonella typhimurium LT2 # 1 53 1 53 54 57 64.0 4e-09 MEFHENRARQPFIGFVLLVRFIKKWWLQEQTRRALQRMSDEQLKDIGLRRDQIN >gi|289774778|gb|GG745513.1| GENE 317 347299 - 348711 1578 470 aa, chain + ## HITS:1 COG:yjiR KEGG:ns NR:ns ## COG: yjiR COG1167 # Protein_GI_number: 16132161 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 470 1 470 470 816 80.0 0 MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQLLEQQQMIVPQP RSGYFVAPRKAQPPVPPMSRPVQRPVEITQWDQVLTMLDARYDKSIIPFGGGSPDVTQPS LKPIWRELSRAIQHNLSEVLNYDELAGRRELREQIARLMLDGGSVVTADDLVLTSGCHSA LSLALLSVCQPGDIVAVESPCYYGTMQMLRGLGLKTIEIPTDPETGISIEALELALDQWP IKGVILVPNCNNPLGFIMPDARKRAVLNLAQRHDIVIFEDDIYGELATEYPRPRTIHSWD IDGRVMLCSSFTKTIAPGLRIGWIAPGRYYDKLLQMKYAASGTNVPSTQLAACNFIREGH YHRHVRRMRQIYQRNMEIYTCWLREFFPCGICVTRPKGGFMLWVELPEQVDMVCVAKQLC RLKIQVAPGSLFSAAGKYRNCVRINCALPPTEKHKAVMVKLGEAVKVAME >gi|289774778|gb|GG745513.1| GENE 318 348784 - 349203 642 139 aa, chain - ## HITS:1 COG:PA1129 KEGG:ns NR:ns ## COG: PA1129 COG0346 # Protein_GI_number: 15596326 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pseudomonas aeruginosa # 1 138 1 135 135 156 64.0 9e-39 MLSGLNHLTLAVSQLAPSVAFYQQLLGMTLHARWDSGAYLSCGDLWLCLSLDPQRRITPP EESDYTHYAFSISEADFASFAARLEVAGVAVWKLNRSEGASHYFLDPDGHKLELHVGSLA QRLAACREQPYKGMVFFDQ >gi|289774778|gb|GG745513.1| GENE 319 349197 - 349784 539 195 aa, chain - ## HITS:1 COG:PA1223 KEGG:ns NR:ns ## COG: PA1223 COG0583 # Protein_GI_number: 15596420 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 190 110 297 297 211 62.0 7e-55 MASAILLPMLGRLRLASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPPGLHQRLL FRERYVLAGRAEHPALRPGLSLETFCQLEHVIVSPDGGGFSAATDTALANLGLARRVVLS VPHFLFMLETLRNSDLVAVLPERLVRGQSGLEVVEPPLAVAGFEMLMLWHERWHRDPAHQ WLRQFIVNSLEEQTC >gi|289774778|gb|GG745513.1| GENE 320 350358 - 350564 294 68 aa, chain - ## HITS:1 COG:mll4435 KEGG:ns NR:ns ## COG: mll4435 COG0583 # Protein_GI_number: 13473737 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 2 67 1 68 304 78 66.0 3e-15 MINLHRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRG MQPTARAS >gi|289774778|gb|GG745513.1| GENE 321 350651 - 351433 1005 260 aa, chain + ## HITS:1 COG:PA1224 KEGG:ns NR:ns ## COG: PA1224 COG2249 # Protein_GI_number: 15596421 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Pseudomonas aeruginosa # 1 257 1 257 259 356 68.0 2e-98 MKVLLIYAHPEPRSLNGALKNFAVRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGE FWRPTLDSKQAFAQGTQSADIAAEQEKLLWADTVIFQFPLWWFSMPAIMKGWIDRVYAWG FAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGWAEHYSPRGINGPIDDILFPIQHGM LFYPGFDVLPPLVFYRTDKTDAGQFADQCATLAERLDTLWQTEPIPFRRQNHGDYLIPSL TLRPELAPGQSGLAVHLRSE >gi|289774778|gb|GG745513.1| GENE 322 351471 - 352427 1011 318 aa, chain - ## HITS:1 COG:ECs0378 KEGG:ns NR:ns ## COG: ECs0378 COG1172 # Protein_GI_number: 15829632 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 316 1 316 318 459 91.0 1e-129 MKKSWRNNVEFYLIGLLLLTVIAFSIAMPNIFWSVSNFQSIASQMPVLGILALAMAMTML CGGINLSIIATANACSLVMAWVATSYPPGGATALATLLAGGGAAMIIGLCNGILIAGIRV SPILATLGMMTLLKGINILITGGSAIANYPQWVLWLNHAQWFGIPLPMWLFAVVAFGLWV LLEKSPLGRAIMLIGSNERATHYSGINTRRVLMWVYVISALLCAVAAFLMMSKLNSAKAS YGESYLLVSILAAVLGGVNPDGGSGRIVGMVLALFLLQIIESGFNILGISPYLTMALWGV LLLCFIQARGMLGLERAG >gi|289774778|gb|GG745513.1| GENE 323 352424 - 353395 1409 323 aa, chain - ## HITS:1 COG:ECs0377 KEGG:ns NR:ns ## COG: ECs0377 COG1172 # Protein_GI_number: 15829631 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 485 88.0 1e-137 MANLLKQHEFWLGMFIIALCLLLGWRSEEFFTFGNLYDLANNYAMLTILACGLFVVLIAG GIDISFPAMTIIAQYGMVVMLQKVSGNFAVAFVLAGGIGVLLGLVNALLVNRLRVPSIII TISTLNIFYGLLLWLSKGVWLYDFPPWFEKGVMLFKYTDADGYDYGLGLPLLTMIAVVLL TAFIMNFTTVGRKIYAMGGNRESASRVGFSVLRLQLFVYGYMGLMSGAAGVVQAWTVMTV APDSLLGYELTVLAAVVLGGTSLIGGRGTLTGTLLGVILLAVMQNGLNLLGVSSYWQTLI TGAIIVVSISVTAWSQHQNRSLL >gi|289774778|gb|GG745513.1| GENE 324 353388 - 354872 194 494 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 253 477 7 224 312 79 27 2e-13 MEPFLSLRHVSKTFHANRALNDISLDFMPGEVHCLAGQNGCGKSTLIKIISGVYRPDEGA AMTLGGKTWPKLTPAASVAHGIQVIYQDLSLFPNLSVWENIAINHYHRGVLVRRSELRRS AEQAMRSINVSLPLDAAVESLSIARCQLVAICRALAQDARLIIMDEPTASLTHQEVEGLL HVVRQLRERGICVVFVSHRLEEVMAVSDRISVLKDGNLVGTLPAAEVTTRRLGFLMTGQE FDYQVRDLWQGKGSTPVLEVRNLCRKGEYHNVSLKVEAGEVVSIVGLLGAGRTELCLSLF GMTRPDSGEILINGQPVRLRSNQDAIRHGIGYVSEDRMSRGLVMSQSIENNIISTVFHKV KGACGLLSDSKAQQLVARMVNALTIKAPDTHLPVNTLSGGNAQRVSIAKWLAISPKLLIL DSPTVGVDIANKAGIYHIISDLAAHGIAVLMICDEIEEAWYQSHRILVMKQGELTHNFPP DSSTQQQIAEVVNG >gi|289774778|gb|GG745513.1| GENE 325 354923 - 355906 1074 327 aa, chain - ## HITS:1 COG:ECs0374 KEGG:ns NR:ns ## COG: ECs0374 COG1879 # Protein_GI_number: 15829628 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 2 328 328 590 92.0 1e-168 MHKRLVVNIFSSLLLGAALISAPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLN ASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESPG QPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEH YPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNK VAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELGK ADVDSDKHIIRFHKVLLVNKDNIDSLY >gi|289774778|gb|GG745513.1| GENE 326 356410 - 357417 1318 335 aa, chain + ## HITS:1 COG:STM4508 KEGG:ns NR:ns ## COG: STM4508 COG0180 # Protein_GI_number: 16767752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 335 1 335 337 563 82.0 1e-160 MNHSQTILTGDRPTGQLHLGHYVGSLRQRVALQHDHQQFILIADLQGLTDNGSNPQKISH HILEVMADYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKG FARSLPVGFLAYPISQAADITAFKAELVPVGDDQLPMIEQTNEIVHKMNSLTGEPVLRHC KALLSEVSRLPGVDGNAKMSKSLGNTLTLSASEEEIHRAVSAMYTDPTHLRVSDPGHVDG NAVFTYLDAFHSDKALVAEMKAHYQRGGLGDRQCKNELETCLQALLAPIRERRATYIQDK GMLLELLRQGSERAHQLTQQTLHEVKRGLGLPVLF >gi|289774778|gb|GG745513.1| GENE 327 357466 - 358860 1290 464 aa, chain - ## HITS:1 COG:ECs2095_2 KEGG:ns NR:ns ## COG: ECs2095_2 COG2199 # Protein_GI_number: 15831349 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 # 273 462 1 190 192 166 44.0 1e-40 MNEESQKYIAVIFKEWLPLYDSLTPDVRALLKKMADERSSMLATRFYDFIFQDPDIARHL SYELVEERLSRSLAGWVQQILTCEKEDLQALAERQYQIGSIHSRIGIPAEAVLRGARQIK SGLVEAIRDSQVARDTGIAAIHYAIMAMNMAVEMMCHAYTLSHYRATKNEEAFRLYSLMD NVPMEYGKQQASLSGWENNAIFNIVSENRTDLNATLLSESEFGLWFRHKCVRYFNHNPQM GEITELIGQVDALITEWRTAEQDAGYKNTQSLLQKIHIHCQHISSQLGVLFSSLSQMQNG KDALTSLLNRRYLPVVLKHEVTLAIEYDLPLTVAIIDIDFFKEINDKWGHMVGDRAIKHV ADLLSDNIRSSDYLFRYGGEEFLLVLVETRAAEAFPLLERLRKKIGQLAFNVGGDTQIPI TASIGFAAHTGHPDYNLLLRDADNALYAAKREGRNCVKMHKGGG >gi|289774778|gb|GG745513.1| GENE 328 359264 - 360331 980 355 aa, chain + ## HITS:1 COG:yhiI KEGG:ns NR:ns ## COG: yhiI COG0845 # Protein_GI_number: 16131359 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 355 1 355 355 481 83.0 1e-135 MDKIKKRWAGYLVGLLVVLAAAAWWLLRPPGLPDGFASSNGRIEATEVDIASKIAGRIDT ILVKEGQFVRQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEA VVKQRQAELDSSAKRHVRSNALSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA IEAARTSIIQAQTRVEAAQATERRILADIDDSELKAPRDGRIQYRVAEPGEVLAAGGRVL NMVDLADVYMTFFLPTEQAGLLALGSEARLILDAAPDLVIPANISFVASVAQFTPKTVET SDERLKLMFRVKARIPPELLAQHLEYVKTGLPGMAYVRVDKQQPWPEALTVRLPQ >gi|289774778|gb|GG745513.1| GENE 329 360328 - 363072 3416 914 aa, chain + ## HITS:1 COG:yhiH_1 KEGG:ns NR:ns ## COG: yhiH_1 COG1131 # Protein_GI_number: 16131358 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli K12 # 18 552 1 532 532 910 84.0 0 MKLTPQDTSPPVALLENVGQQYGATIALRDISLAIPARRMVGLIGPDGVGKSSLLSLIAG ARAIGQGNVMVLGGDMRDVHHRRDVCPKIAWMPQGLGKNLYHTLSVYENVDFFARLFGHD KAERELRINELLQSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPQLLILDEPTTGVDP LSRAQFWELIDSIRQRQPEMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAAELKAQTG SQTLEQAFIALLPEAQRQAHKTVVIPPRDSREEEIAIEARGLTMRFGNFVAVDHVNFRIA RGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIATRQRVGYMSQAFSL YSELSVRQNLELHARLFHIPDDEIAHRVAEMSERFMLTEVKDALPADLPLGIRQRLSLAV AVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLARQDRVTIFISTHFMNEAERCDRISLM HAGKVLASDTPQALVEQRGAASLEEAFIAWLKEAQPSSPVPDKPTSAVTSHSEHTAPRQA FSLRRLFSYSRREALELRRDPVRSTLALLGTVILMFIMGYGISMDVEDLRFAVLDRDQTL SSQGWSQNIAGSRYFIEQAPLHSYDELDRRMRDGELAVAIEIPPNFGRDIARGTPVQIGV WVDGAMPNRAETVRGYVQAMHLAWLQEMAGRQSSPQRDTSLISIETRYRYNPDVKSLPAI VPAVIPLLLMMIPAMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIVLGMFNFF LLCALSVFVFGVAHKGSFLTLTLAALLYVTIATGLGLLISTFMKSQIAAIFGTAIITLIP ATQFSGMIDPVASLEGPGRWIGQIYPTSHFLTIARGTFSKALNLSDLWGSFIPLLIAVPL VLGLSVLLLKKQEG >gi|289774778|gb|GG745513.1| GENE 330 363072 - 364196 1346 374 aa, chain + ## HITS:1 COG:yhhJ KEGG:ns NR:ns ## COG: yhhJ COG0842 # Protein_GI_number: 16131357 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli K12 # 1 374 2 375 375 598 89.0 1e-171 MRGLRNIYNLGVKELRSLLGDKAMLALIVFAFTVSVYSSATVMPGSLHLAPIAVADMDKS QLSSRIINAFYRPWFLEPELITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPEIQVN VDATRMSQAFTGNGYIQNIISGEVNSFVARYRDNSVLPVELAVRMRFNPNLEQERFGAVM AIINNITMLAIVLTGSALIREREHGTIEHLLVMPVTPFEIMMAKIWSMGLVVLVVSGLSL ILMVQGILQVPIEGSIPLFMLGVALSLFATTSIGIFMGTLARSMPQLGLLMILVLLPLQM LSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQAILYRGASFAIVWPQFLTLLAIGGVFFT IALLRFRKTIGEMA >gi|289774778|gb|GG745513.1| GENE 331 364237 - 364554 443 105 aa, chain - ## HITS:1 COG:no KEGG:KP1_0697 NR:ns ## KEGG: KP1_0697 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 105 12 116 116 174 99.0 1e-42 MKILLNWSPLRQLFTYIQERFTFLVLLCWPAIIWLFCRVGVWLTDNVYELLGKSPAQSFT VYLQPFMTPGTLLRISISWIVLLFILFSMAMAFTWGLRRFMNRHK >gi|289774778|gb|GG745513.1| GENE 332 364878 - 365153 88 91 aa, chain - ## HITS:1 COG:no KEGG:KPK_4896 NR:ns ## KEGG: KPK_4896 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 91 1 91 91 166 100.0 3e-40 MKKPLIGILAFAYGLSLPLFAADTATLTLSGRVVSETCSTDIVNKQPQQRCGKNTYLIAS QNSVTNARGVITRTVNLPDDASRKIIISSYD Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:07:27 2011 Seq name: gi|289774647|gb|GG745514.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.7, whole genome shotgun sequence Length of sequence - 129771 bp Number of predicted genes - 131, with homology - 127 Number of transcription units - 93, operones - 24 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 18 - 512 657 ## COG2897 Rhodanese-related sulfurtransferase + Term 527 - 567 8.6 - Term 449 - 493 3.6 2 2 Tu 1 . - CDS 564 - 1178 595 ## COG0558 Phosphatidylglycerophosphate synthase - Prom 1221 - 1280 1.8 + Prom 1180 - 1239 2.6 3 3 Tu 1 . + CDS 1265 - 1675 376 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 1731 - 1790 6.3 4 4 Tu 1 . + CDS 1858 - 3201 1896 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 5 5 Tu 1 . - CDS 3245 - 4225 1056 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 6 6 Op 1 5/0.216 - CDS 4396 - 6342 2700 ## COG0550 Topoisomerase IA 7 6 Op 2 . - CDS 6347 - 7390 1427 ## COG0709 Selenophosphate synthase - Prom 7587 - 7646 3.8 + Prom 7494 - 7553 2.5 8 7 Tu 1 . + CDS 7616 - 8362 1046 ## COG0671 Membrane-associated phospholipid phosphatase 9 8 Tu 1 . - CDS 10083 - 10634 698 ## COG0778 Nitroreductase - Prom 10659 - 10718 3.5 + Prom 10617 - 10676 4.9 10 9 Tu 1 . + CDS 10800 - 12653 2466 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 12662 - 12698 8.6 + Prom 12708 - 12767 3.0 11 10 Op 1 2/0.432 + CDS 12792 - 13811 1254 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 12 10 Op 2 . + CDS 13821 - 14462 783 ## COG1335 Amidases related to nicotinamidase + Term 14471 - 14502 5.5 + Prom 14512 - 14571 2.6 13 11 Tu 1 . + CDS 14633 - 15886 1623 ## COG3325 Chitinase + Prom 15919 - 15978 2.9 14 12 Tu 1 . + CDS 16034 - 16378 522 ## Kvar_3114 HNH endonuclease + Term 16457 - 16485 -0.3 15 13 Op 1 3/0.297 - CDS 16475 - 16753 338 ## COG3139 Uncharacterized protein conserved in bacteria 16 13 Op 2 . - CDS 16797 - 17210 551 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Prom 17245 - 17304 6.5 17 14 Op 1 4/0.297 + CDS 17548 - 18543 995 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 18569 - 18598 2.1 18 14 Op 2 . + CDS 18618 - 19502 1111 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase + Term 19512 - 19542 3.4 - Term 19493 - 19537 7.7 19 15 Op 1 3/0.297 - CDS 19558 - 20442 852 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 20 15 Op 2 . - CDS 20504 - 21250 1050 ## COG3713 Outer membrane protein V - Prom 21280 - 21339 5.3 + Prom 21425 - 21484 2.2 21 16 Op 1 12/0.000 + CDS 21667 - 23601 2773 ## COG2766 Putative Ser protein kinase 22 16 Op 2 . + CDS 23687 - 24970 942 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 + Term 24980 - 25021 9.5 - Term 24967 - 25009 2.1 23 17 Tu 1 . - CDS 25016 - 25492 250 ## Kvar_3123 lipoprotein - Prom 25654 - 25713 3.4 + Prom 25614 - 25673 4.9 24 18 Tu 1 . + CDS 25738 - 26220 489 ## COG0386 Glutathione peroxidase 25 19 Tu 1 . - CDS 26342 - 26653 431 ## Kvar_3125 antibiotic biosynthesis monooxygenase domain protein 26 20 Tu 1 . - CDS 26759 - 27646 497 ## COG0583 Transcriptional regulator - Prom 27695 - 27754 2.1 + Prom 27654 - 27713 3.0 27 21 Tu 1 . + CDS 27744 - 28796 866 ## Kvar_3127 NAD-dependent epimerase/dehydratase - Term 28694 - 28726 -0.7 28 22 Tu 1 . - CDS 28806 - 29687 743 ## COG0583 Transcriptional regulator - Prom 29743 - 29802 3.4 + Prom 29729 - 29788 1.8 29 23 Tu 1 . + CDS 29863 - 31053 1275 ## COG2814 Arabinose efflux permease + Term 31285 - 31321 3.3 30 24 Op 1 . - CDS 31050 - 32066 858 ## KPK_3259 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 31 24 Op 2 34/0.000 - CDS 32088 - 32816 560 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 32 24 Op 3 31/0.000 - CDS 32813 - 33469 730 ## COG0765 ABC-type amino acid transport system, permease component - Term 33482 - 33512 2.3 33 24 Op 4 . - CDS 33521 - 34273 651 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 34338 - 34397 1.8 34 25 Op 1 . - CDS 34401 - 34955 424 ## KPK_3264 hypothetical protein 35 25 Op 2 3/0.297 - CDS 34952 - 36280 1415 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 36314 - 36373 2.5 - Term 36352 - 36400 -0.7 36 26 Tu 1 . - CDS 36409 - 37266 992 ## COG1737 Transcriptional regulators - Prom 37431 - 37490 2.4 + Prom 37387 - 37446 3.0 37 27 Op 1 4/0.297 + CDS 37493 - 38500 702 ## COG2207 AraC-type DNA-binding domain-containing proteins 38 27 Op 2 . + CDS 38510 - 39433 749 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 39 28 Tu 1 . - CDS 39447 - 40382 783 ## COG0583 Transcriptional regulator - Prom 40415 - 40474 6.0 + Prom 40399 - 40458 3.3 40 29 Op 1 . + CDS 40483 - 41592 1067 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 41 29 Op 2 . + CDS 41595 - 42188 389 ## Kvar_3141 hypothetical protein - Term 42178 - 42214 -0.2 42 30 Tu 1 . - CDS 42278 - 43027 933 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 42997 - 43056 2.9 43 31 Tu 1 . + CDS 43195 - 44100 750 ## COG0583 Transcriptional regulator + Prom 44235 - 44294 5.7 44 32 Tu 1 . + CDS 44501 - 44746 118 ## KPK_3274 hypothetical protein + Term 44974 - 45002 -0.9 + Prom 44827 - 44886 4.3 45 33 Op 1 . + CDS 45062 - 47755 3465 ## COG0474 Cation transport ATPase 46 33 Op 2 . + CDS 47831 - 48055 99 ## KPK_3277 hypothetical protein 47 33 Op 3 . + CDS 48070 - 49722 2128 ## COG1283 Na+/phosphate symporter 48 33 Op 4 . + CDS 49788 - 50132 282 ## Kvar_3148 hypothetical protein + Prom 50178 - 50237 2.8 49 34 Tu 1 . + CDS 50459 - 51592 172 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Term 51621 - 51651 3.0 50 35 Tu 1 . - CDS 51736 - 52323 252 ## COG1309 Transcriptional regulator - Prom 52415 - 52474 3.8 + Prom 52407 - 52466 4.2 51 36 Tu 1 . + CDS 52489 - 53931 315 ## COG0477 Permeases of the major facilitator superfamily - Term 53900 - 53953 0.5 52 37 Op 1 3/0.297 - CDS 54054 - 54839 844 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 53 37 Op 2 . - CDS 54891 - 55787 748 ## COG1802 Transcriptional regulators - Prom 55920 - 55979 4.6 + Prom 55876 - 55935 4.8 54 38 Op 1 31/0.000 + CDS 55980 - 56792 997 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 55 38 Op 2 34/0.000 + CDS 56820 - 57545 825 ## COG0765 ABC-type amino acid transport system, permease component 56 38 Op 3 1/0.459 + CDS 57542 - 58282 523 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 57 38 Op 4 . + CDS 58296 - 59471 1149 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 58 38 Op 5 . + CDS 59468 - 60568 990 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 59 38 Op 6 . + CDS 60555 - 61724 1343 ## COG0006 Xaa-Pro aminopeptidase 60 38 Op 7 . + CDS 61735 - 62658 1184 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Term 62394 - 62447 10.6 61 39 Tu 1 . - CDS 62642 - 63739 960 ## COG0504 CTP synthase (UTP-ammonia lyase) 62 40 Tu 1 . + CDS 63808 - 65016 1146 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 65079 - 65122 6.8 + Prom 65310 - 65369 3.4 63 41 Tu 1 . + CDS 65403 - 65990 310 ## KPK_3296 transcriptional regulator, TetR family 64 42 Tu 1 . - CDS 66017 - 66793 388 ## KPK_3297 hypothetical protein - Prom 66883 - 66942 8.3 65 43 Tu 1 . + CDS 67287 - 67706 211 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Prom 68621 - 68680 2.1 66 44 Tu 1 . + CDS 68741 - 68971 83 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Prom 69150 - 69209 4.0 67 45 Tu 1 . + CDS 69235 - 69477 451 ## KPK_3301 putative virulence protein MsgA + Term 69479 - 69514 -0.9 - Term 69543 - 69587 -0.4 68 46 Tu 1 . - CDS 69648 - 70784 996 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 70839 - 70898 8.6 + Prom 70837 - 70896 10.5 69 47 Tu 1 . + CDS 71034 - 71534 574 ## COG2606 Uncharacterized conserved protein + Term 71550 - 71588 4.0 + Prom 71566 - 71625 2.7 70 48 Tu 1 . + CDS 71652 - 72098 726 ## COG2707 Predicted membrane protein 71 49 Tu 1 . - CDS 72082 - 72873 993 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 72897 - 72956 5.0 + Prom 72891 - 72950 1.8 72 50 Tu 1 . + CDS 72974 - 74158 1571 ## COG2807 Cyanate permease + Term 74162 - 74199 5.2 73 51 Tu 1 . - CDS 74190 - 74882 873 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 74922 - 74981 1.8 + Prom 74945 - 75004 2.4 74 52 Op 1 . + CDS 75028 - 75537 455 ## COG1683 Uncharacterized conserved protein 75 52 Op 2 . + CDS 75524 - 75880 391 ## COG3189 Uncharacterized conserved protein - Term 75805 - 75841 2.4 76 53 Tu 1 . - CDS 75870 - 76109 292 ## COG3042 Putative hemolysin - Prom 76131 - 76190 3.6 + Prom 76270 - 76329 2.8 77 54 Op 1 . + CDS 76411 - 77424 1225 ## COG2203 FOG: GAF domain + Term 77433 - 77470 0.5 78 54 Op 2 . + CDS 77482 - 77583 61 ## - Term 77920 - 77957 5.3 79 55 Tu 1 . - CDS 77962 - 78225 400 ## Kvar_3189 hypothetical protein - Prom 78256 - 78315 4.2 - Term 78306 - 78352 2.2 80 56 Op 1 . - CDS 78356 - 78994 980 ## COG1280 Putative threonine efflux protein - Prom 79022 - 79081 1.7 81 56 Op 2 . - CDS 79084 - 79998 1347 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 80139 - 80198 3.0 - Term 80528 - 80564 0.9 82 57 Tu 1 . - CDS 80655 - 81698 1109 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 81756 - 81815 6.2 + Prom 81713 - 81772 4.8 83 58 Op 1 . + CDS 82007 - 83215 1367 ## COG2206 HD-GYP domain 84 58 Op 2 . + CDS 83289 - 85073 2186 ## COG2770 FOG: HAMP domain - Term 84834 - 84869 1.8 85 59 Tu 1 . - CDS 85080 - 85970 182 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 85997 - 86056 5.6 + Prom 85941 - 86000 2.9 86 60 Tu 1 . + CDS 86091 - 87593 1707 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases + Term 87711 - 87759 0.0 87 61 Tu 1 . - CDS 87669 - 88067 431 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 88108 - 88167 4.8 88 62 Tu 1 . - CDS 88209 - 88895 669 ## COG2200 FOG: EAL domain - Prom 89027 - 89086 5.5 89 63 Op 1 . - CDS 89530 - 90162 695 ## Kvar_3199 hypothetical protein - Prom 90186 - 90245 1.9 90 63 Op 2 . - CDS 90254 - 90358 110 ## - Prom 90460 - 90519 4.5 + Prom 90463 - 90522 4.5 91 64 Tu 1 . + CDS 90736 - 90933 239 ## Kvar_3201 hypothetical protein + Term 90947 - 90999 3.0 - Term 90906 - 90947 -0.1 92 65 Tu 1 . - CDS 90992 - 91786 864 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 91810 - 91869 1.8 + Prom 91759 - 91818 2.9 93 66 Op 1 . + CDS 91864 - 93915 1636 ## COG1289 Predicted membrane protein 94 66 Op 2 . + CDS 93908 - 94120 221 ## Kvar_3204 hypothetical protein 95 66 Op 3 . + CDS 94117 - 95037 1007 ## COG1566 Multidrug resistance efflux pump 96 67 Op 1 31/0.000 - CDS 95031 - 96041 1634 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 97 67 Op 2 . - CDS 96038 - 97444 1645 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 98 67 Op 3 3/0.297 - CDS 97500 - 98387 1099 ## COG3546 Mn-containing catalase 99 67 Op 4 4/0.297 - CDS 98404 - 98910 622 ## COG3685 Uncharacterized protein conserved in bacteria 100 67 Op 5 3/0.297 - CDS 98937 - 99431 565 ## COG3685 Uncharacterized protein conserved in bacteria - Prom 99458 - 99517 2.1 - Term 99446 - 99483 7.1 101 68 Tu 1 . - CDS 99521 - 99706 129 ## COG3729 General stress protein + Prom 100177 - 100236 3.1 102 69 Tu 1 . + CDS 100316 - 101509 1244 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 103 70 Tu 1 . - CDS 101898 - 102443 212 ## COG1335 Amidases related to nicotinamidase - Prom 102661 - 102720 3.5 104 71 Tu 1 . + CDS 102763 - 103236 272 ## COG1764 Predicted redox protein, regulator of disulfide bond formation 105 72 Op 1 . + CDS 103374 - 103697 219 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 106 72 Op 2 . + CDS 103690 - 104082 127 ## Kvar_3219 amino acid-binding ACT domain protein 107 72 Op 3 . + CDS 104079 - 104792 359 ## COG0640 Predicted transcriptional regulators - Term 104787 - 104825 1.1 108 73 Tu 1 . - CDS 104909 - 105349 340 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 105548 - 105607 9.0 109 74 Tu 1 . + CDS 105973 - 106203 60 ## - Term 105895 - 105936 1.1 110 75 Op 1 11/0.027 - CDS 106144 - 106896 299 ## COG2801 Transposase and inactivated derivatives 111 75 Op 2 . - CDS 106977 - 107243 365 ## COG2801 Transposase and inactivated derivatives - Prom 107349 - 107408 4.9 - Term 107422 - 107463 2.1 112 76 Tu 1 . - CDS 107466 - 108566 -345 ## c0290 hypothetical protein - Prom 108618 - 108677 2.9 113 77 Tu 1 . + CDS 109159 - 109836 118 ## COG2135 Uncharacterized conserved protein 114 78 Tu 1 . + CDS 110634 - 111188 -153 ## COG4823 Abortive infection bacteriophage resistance protein + Prom 111897 - 111956 1.5 115 79 Tu 1 . + CDS 112083 - 112541 -404 ## VIBHAR_01945 hypothetical protein + Term 112608 - 112666 0.6 116 80 Tu 1 . - CDS 112627 - 113355 -40 ## COG3183 Predicted restriction endonuclease - Prom 113480 - 113539 3.5 - Term 113502 - 113554 1.1 117 81 Tu 1 . - CDS 113582 - 114769 438 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 114839 - 114898 1.8 - Term 115299 - 115333 7.0 118 82 Tu 1 . - CDS 115357 - 115521 268 ## COG0538 Isocitrate dehydrogenases - Prom 115556 - 115615 5.6 - Term 115976 - 116002 1.0 119 83 Tu 1 . - CDS 116008 - 116214 83 ## c3205 hypothetical protein - Prom 116289 - 116348 1.7 120 84 Tu 1 . - CDS 116381 - 117148 190 ## c3206 hypothetical protein - Prom 117288 - 117347 6.5 + Prom 117434 - 117493 4.9 121 85 Tu 1 . + CDS 117709 - 118380 223 ## COG2135 Uncharacterized conserved protein + Prom 118396 - 118455 4.8 122 86 Tu 1 . + CDS 118495 - 119394 -89 ## Arnit_2649 FRG domain-containing protein + Term 119401 - 119450 8.6 - Term 119391 - 119433 10.1 123 87 Op 1 4/0.297 - CDS 119470 - 120657 281 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 124 87 Op 2 . - CDS 120737 - 121219 -63 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 125 88 Tu 1 . + CDS 121848 - 121979 68 ## + Term 122112 - 122144 -0.1 - Term 121764 - 121799 -0.6 126 89 Tu 1 . - CDS 121921 - 122538 107 ## LPST_C1712 hypothetical protein - Prom 122573 - 122632 4.2 127 90 Tu 1 . - CDS 122697 - 123245 102 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 123265 - 123324 4.1 128 91 Op 1 . + CDS 123337 - 125424 1078 ## KPK_3132 hypothetical protein 129 91 Op 2 . + CDS 125425 - 126174 43 ## KPK_3131 hypothetical protein + Term 126277 - 126311 4.2 - Term 126217 - 126256 1.0 130 92 Tu 1 . - CDS 126495 - 126785 80 ## gi|290512894|ref|ZP_06552259.1| predicted protein 131 93 Tu 1 . - CDS 128316 - 129770 618 ## Kvar_1820 hypothetical protein Predicted protein(s) >gi|289774647|gb|GG745514.1| GENE 1 18 - 512 657 164 aa, chain + ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 2 164 278 440 440 277 82.0 7e-75 MPPAQQPAQDFGAPIPGQPQLMLDTEQARGLLHRQDASLVSVRSWPEFIGTTSGYSYIKP KGDIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIATLWRQWNILPSQQVAFYCGTGWRA SETFMYARAMGWPHVAVYDGGWYEWSSNPHNPVARGARGPESSQ >gi|289774647|gb|GG745514.1| GENE 2 564 - 1178 595 204 aa, chain - ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 203 3 205 208 286 82.0 2e-77 MLDSHLHPRLKPLLNAVAGALDRPGISPDGLTLLGFAIGVLALPFLALGWYSAALVAILF NRLLDGLDGALARRRGLTDAGGFLDIALDFLFYALVPFGFILADPLNNALAGAWLLFAFI GTGSSFLAFAALAARHQIANPGYAHKSLYYLGGLTEGTETILLFVLCCLFPAHFAWLAWL FGALCWLTTATRICSGYQTLKRVV >gi|289774647|gb|GG745514.1| GENE 3 1265 - 1675 376 136 aa, chain + ## HITS:1 COG:STM1301 KEGG:ns NR:ns ## COG: STM1301 COG0494 # Protein_GI_number: 16764652 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 130 1 130 138 175 71.0 3e-44 MLKMIDVVAAIIEQDGQILLAQRPPHADQPGMWEFAGGKVEPGESQPQALARELQEEMGI IAHPACYIASHQREVSGRQIHLHAWWVPHFQGIPLAHYHTQLRWCLPADALTLDLAPADI PLLHAFIAQRPTLSGR >gi|289774647|gb|GG745514.1| GENE 4 1858 - 3201 1896 447 aa, chain + ## HITS:1 COG:STM1299 KEGG:ns NR:ns ## COG: STM1299 COG0334 # Protein_GI_number: 16764650 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 447 1 447 447 843 91.0 0 MDQTCTLEGFLTRVQQRDPHQTEFAQAVREVMTTLWPFLEENPRYRQLALLERLVEPERV IQFRVVWVDDRNQVQVNRAWRVQFNSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFDPKGKSDGEVMRFCQALMTELYRHLGPDTDVPAGDIGVGGREVGFMA GMMRKLSNNSACVFTGKGLSFGGSLIRPEATGYGLIYFTEAMLKRHGLGFEGARVAVSGS GNVAQYAIEKAMELGARVVTASDSNGTVVDEAGFTKEKLARLIDIKERAHGRVADYAREF GLTYLEGQQPWSVPVDIALPCATQNELDVDAARQLIANGVKAVAEGANMPTTIAATDLFL EADVLFAPGKAANAGGVATSGLEMAQNAARMGWKAEKVDARLHHIMLDIHHACVQYGGEA KQTNYVRGANIAGFVKVADAMLAQGVI >gi|289774647|gb|GG745514.1| GENE 5 3245 - 4225 1056 326 aa, chain - ## HITS:1 COG:AGc1508 KEGG:ns NR:ns ## COG: AGc1508 COG0604 # Protein_GI_number: 15888165 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 325 22 348 348 343 53.0 2e-94 MKYIAISQPGGPEVLQIREGEIPAIGENEVLIAVKAAGVNRPDILQRQGLYPMPKGVTPV PGLEVAGVVVEVGAQVTAFAPGDRVCALTNGGGYAEYCAVPAGQTLPIPAGLSFSEAAAI PETFFTVWANVFQLGKLQPGESILIHGGASGIGTTAVLLCHALGMTVYATVGQDEKIAAL RPYATAINYKTDDFAEKISQLTHDEGVDVILDIVGGPYFNRNLGILKKDGRLVIIGFMGG RIAHEVDIQTLMLKRATITGSTMRGRTAAEKQEIAEALRRHVWPLLEAGKCKPMIYASYP MAEVAEAHACLDSGQHLGKVVITMTS >gi|289774647|gb|GG745514.1| GENE 6 4396 - 6342 2700 648 aa, chain - ## HITS:1 COG:topB KEGG:ns NR:ns ## COG: topB COG0550 # Protein_GI_number: 16129717 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 645 1 643 653 1180 89.0 0 MRLFIAEKPSLGRAIADVLPKPHRKGDGYIECGNGQVVTWCIGHLLEQAQPDVYDSRYAR WNLTDLPIVPEKWQLQPKPSVTKQLNVIKRLLGEAQEVIHAGDPDREGQLLVDEVLDYLQ LAPEKRQQVQRCLINDLNPQAVERAINRLRANSEFVPLCVSALARARADWLYGINMTRAY TLLGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPQEERFVATW VPSEACEPYQDEEGRLLHRPLAEHVVKRIEGQPALVTGYNDKRDSEPAPLPFSLSALQIE AAKRFGFSAQNVLDICQKLYETHKLITYPRSDSRYLPEEHFAGRHAVLNAIAVHAADLLP QPVMDPEIRNRCWDDKKVDAHHAIIPTARSSQVKLTDNEAKVYHLIARQYLMQFCPDAVF RKCQIDLEIANGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKDDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF LTKKGRYIHSSDAGRALIHSLPEMAARPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLF QLIDQARSTPVRQFRGLAAPGGAKKSFSKGKGKPKGKKAADDAAPPPQ >gi|289774647|gb|GG745514.1| GENE 7 6347 - 7390 1427 347 aa, chain - ## HITS:1 COG:STM1297 KEGG:ns NR:ns ## COG: STM1297 COG0709 # Protein_GI_number: 16764648 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 605 89.0 1e-173 MSEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNG TSIVSTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIARE VVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTERIKKNSTAQAGCKLYLTKPL GIGVLTTAEKKSLLKPEHHGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEV CRGAGVQAQLRYADIPKLPGVEGYIAAGAVPGGTGRNFASYGHLMGEMPAEWRDLLCDPQ TSGGLLLAVTPEAEAEVQAAAAEFGIKLAAIGELVTARGGRPMIEIR >gi|289774647|gb|GG745514.1| GENE 8 7616 - 8362 1046 248 aa, chain + ## HITS:1 COG:STM4319 KEGG:ns NR:ns ## COG: STM4319 COG0671 # Protein_GI_number: 16767569 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 41 243 31 233 250 187 45.0 1e-47 MKKRVLALCLASFFSVNAFALVPPGNDVTTKPDLYYLTNAQAIDSLALLPPPPAVGSIAF LNDQAMYEQGRLLRNTERGKLAAEDANLSAGGVANAFSSAFGSPITEKDAPQLHKLLTNM IEDAGDLATRGAKEKYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLA EINPQRQNEILKRGYELGESRVICGYHWQSDVDAARIVGSAVVATLHTNPAFQQQLQKAK DEFAKTQK >gi|289774647|gb|GG745514.1| GENE 9 10083 - 10634 698 183 aa, chain - ## HITS:1 COG:ECs2471 KEGG:ns NR:ns ## COG: ECs2471 COG0778 # Protein_GI_number: 15831725 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 297 79.0 6e-81 MDALDLLLNRRSASRLAEPAPAGEQLENILRAGLRAPDHGTLQPWRFFIIADDGRERFSQ LLEKGATEAGQDEKGIEKARNAPFRAPLIITVVARCEDHPKVPRWEQEMSAGCAVMAMQM AALAQGFNGIWRSGALTESPVVRAGFACREQDKIVGFLYLGTPQLKASTTIALPDTAPFV TRF >gi|289774647|gb|GG745514.1| GENE 10 10800 - 12653 2466 617 aa, chain + ## HITS:1 COG:STM1295 KEGG:ns NR:ns ## COG: STM1295 COG0616 # Protein_GI_number: 16764646 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Salmonella typhimurium LT2 # 1 617 1 618 618 1045 83.0 0 MRTLWRLIASFFKWTWRILNFIRKLALNAIFLVLVLVCIGIWSQFSTTTSEHAARGALLL DITGVVVDKPSASSKLGVIGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLK NFVGGDQPSMQYIGKALREFRDSGKPVYAVGSSYSQGQYYLASFANKIWLSPQGEVDLHG FATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLN TIAANRQITAQQLFPGAQGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTKQFGW SKTDNNYRAISYYDYNVKTPSDEGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARL DPKIKAIVLRVNSPGGSVTASEIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYI VANPSTLTGSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSSTKALPPEVQQLMQLSI ENGYQRFITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAK LKTWHLNYYQEEPTFFSMVLDSLTGSVRASLPAAIQAWLPAPVAAAAETVKAESDKLAAF NDPQNRYAFCLTCANIR >gi|289774647|gb|GG745514.1| GENE 11 12792 - 13811 1254 339 aa, chain + ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 625 91.0 1e-179 MQKKSIYVAYTGGTIGMQRSEHGYVPVSGHLQRQLALMPEFHRPEMPDFTIHEYHPLMDS SDMTPEDWQHIADDIRSHYDEYDGFVILHGTDTMAFTASALSFMLENLGKPVIVTGSQIP LAELRSDGQINLLNALYVAANYPINEVALFFNNRLFRGNRTTKAHADGFDAFASPNLAPL LEAGIHIRRLGTPPAPQGRGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNGEFIQVLAEASQRGIVVVNLTQCMSGKVNMGGYATGNALAQAGVISGFDM TVEATLTKLHYLLSQQLDVDAIRAAMQQNLRGELTPDEA >gi|289774647|gb|GG745514.1| GENE 12 13821 - 14462 783 213 aa, chain + ## HITS:1 COG:ECs2475 KEGG:ns NR:ns ## COG: ECs2475 COG1335 # Protein_GI_number: 15831729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 213 7 219 219 348 78.0 3e-96 MAHRALLLVDLQNDFCAGGALAVPEGDSTVEVANALIDWSLARGEPIVASQDWHPADHGS FASQHQVAPYTLGELDGLAQTFWPDHCVQHSEGAALHPLLKQQAINAVFHKGQNRVIDSY SAFFDNGHRQKTELDGWLRGQGIVELTVLGLATDYCVKFTVLDALALGYTVNVIIDGCRG VNLQPQDSSQAFMEMAAAGATLYTLDDWRESQA >gi|289774647|gb|GG745514.1| GENE 13 14633 - 15886 1623 417 aa, chain + ## HITS:1 COG:BH0916_1 KEGG:ns NR:ns ## COG: BH0916_1 COG3325 # Protein_GI_number: 15613479 # Func_class: G Carbohydrate transport and metabolism # Function: Chitinase # Organism: Bacillus halodurans # 81 414 127 446 450 152 32.0 2e-36 MKRLPLLAALPLLCASALSAQPLMSVGYFNGGGDVTAGPGGDIDKLDVRQITHLNYSFGL IYNDEKDETNAALKDPAHLHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWGGRGFS GAAASKETRKVFIQSAQEIVEKYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKEL RAAFGTRKLVTIAVGANAESPKSWVDVKAIAPSLDYINLMTYDMAYGTQYFNSNLYDSSH WPTVAAADKYSADFVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPV TQPYFGPQEVALFASLGYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPWLSVQS AEGKPLFALSYENPRSVAIKADYIKAKGLAGAMFWEYGADDQNQLARQLAESLGIKH >gi|289774647|gb|GG745514.1| GENE 14 16034 - 16378 522 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3114 NR:ns ## KEGG: Kvar_3114 # Name: not_defined # Def: HNH endonuclease # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 230 100.0 2e-59 MAYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSN WEMLCLYCHDHEHSKYTEADQYGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK >gi|289774647|gb|GG745514.1| GENE 15 16475 - 16753 338 92 aa, chain - ## HITS:1 COG:STM1292 KEGG:ns NR:ns ## COG: STM1292 COG3139 # Protein_GI_number: 16764643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 92 1 92 92 144 84.0 4e-35 MDIEQIIDSMTPEVYQRLATAVELGKWPDGVALTPEQKENSLQLVMLWQARYNTDAQHMT IDTRGQMVMKSKQQLKEDFGIVPKPIATVKLQ >gi|289774647|gb|GG745514.1| GENE 16 16797 - 17210 551 137 aa, chain - ## HITS:1 COG:ECs2487 KEGG:ns NR:ns ## COG: ECs2487 COG0229 # Protein_GI_number: 15831741 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 252 86.0 2e-67 MANKPSPEELKNGLSEMQFYVTQHHGTEPPFTGRLLHNKKNGVYHCLVCDAPLFNSQTKY DSGCGWPSFYEPVSDEAIRYLTDNSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVN SASLSFTDEQNGEQIKG >gi|289774647|gb|GG745514.1| GENE 17 17548 - 18543 995 331 aa, chain + ## HITS:1 COG:STM1290 KEGG:ns NR:ns ## COG: STM1290 COG0057 # Protein_GI_number: 16764641 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 619 96.0 1e-177 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDAEYMAYMLKYDSTHGRFDGTVEV KDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLT GPSKDNTPMFVRGANFETYAGQDIVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATT ATQKTVDGPSHKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV VDLTVRLEKAASYEEIKKAIKAASEGAMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|289774647|gb|GG745514.1| GENE 18 18618 - 19502 1111 294 aa, chain + ## HITS:1 COG:STM1289 KEGG:ns NR:ns ## COG: STM1289 COG0676 # Protein_GI_number: 16764640 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 499 81.0 1e-141 MINKIFALPVNETISPVISRRQLDDLELIVIDHPQVKASVALQGAHLLSWKPAGEEEVLW LSNNTPFKQGVALRGGVPICWPWFGPSAQQGLPSHGFARNLPWTLEGHDEDDSGVMLTFA LQHSAETMKLWPHEFTLYARFKLGKTCEIELEAHGEFETTSALHTYFNVGDIAAVKVSGL GERYIDKVKNAEEGVLSNGVQTFPDRTDRVYLNADSCSVIHDDALNRTIDVVHHHQHNVV AWNPGPALSVSMGDMPDDGYKTFVCVETCCVTQPQKASEETPSRLAQTISLKKR >gi|289774647|gb|GG745514.1| GENE 19 19558 - 20442 852 294 aa, chain - ## HITS:1 COG:STM1288 KEGG:ns NR:ns ## COG: STM1288 COG0656 # Protein_GI_number: 16764639 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 14 294 5 285 285 394 69.0 1e-109 MVVQKAKKEETVKKTVRFGEQAAVPAIGLGTWYMGENSAQRPQEVAALRAGIDHGLTVID TAEMYADGGAEEVVGQAIRGLRDRVVLVSKVYPWHAGGTAMRRACENSLRRLQTDYLDMY LLHWRGDIPLQETVEAMERLVAEGKIRRWGVSNLDTDDMQALWRTAGGERCATNQVLYHL ASRGIEYDLLPWCQQHTLPVMAYCPLAQAGRLRDGLFQHTDIINMANARGVTVAQLLLAW VIRHPGVLAIPKAASIEHVVQNAAALDIVLSAEELAQLDRLYPPPQRKTRLDMV >gi|289774647|gb|GG745514.1| GENE 20 20504 - 21250 1050 248 aa, chain - ## HITS:1 COG:STM1286 KEGG:ns NR:ns ## COG: STM1286 COG3713 # Protein_GI_number: 16764637 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Salmonella typhimurium LT2 # 1 248 1 248 248 394 79.0 1e-109 MTKIKLLALGVLIATSASAAHADGKFTLGAGVGIVEHPYKQYDADVYPVPVISYESDNFW FHGLGGGYYLWNDTNDKLSITAYWSPMYFKPGDSDSAQMRQLDKRKSTVMAGLSYVHNTP YGFLRTTIAGDTLDNSNGINWDLAWLYRYTNGNLTLTPGIGVEWNSDNQNEYYYGVSQHE SRRSGMRSYDPDSSWNPYLELSANYRFLGDWSVYGIARYTRLSDEITDSPMVDKSWSGLI STGITYTF >gi|289774647|gb|GG745514.1| GENE 21 21667 - 23601 2773 644 aa, chain + ## HITS:1 COG:ECs2492 KEGG:ns NR:ns ## COG: ECs2492 COG2766 # Protein_GI_number: 15831746 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1271 97.0 0 MNIFDHYRQRYEAAKDEEFTLQEFLTICRQDRSAYANAAERLLMAIGEPVMVDTALEPRL SRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKALMQRVPIYVLSANGERSPVNDHPLCLFNPQEDAQILQKEYGVPTRYLGTIMSPWA AKRLHEFGGDITKFRVVKVWPSILEQVAIAKTEPGDENNQDISALVGKVDIRKLEHYAQN DPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIRIYEKLLNSSELTHAPCAPGT LETLARFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQENAERYLEFLKGYLIPKYA EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|289774647|gb|GG745514.1| GENE 22 23687 - 24970 942 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 1 418 1 433 445 367 44 1e-100 MTWFIDRRLNGKNKSAVNRQRFLRRYKAQIKQSISEAINKRSVTDIESGESVSIPTDDIN EPMFHQGRGGLRNRVHPGNDHFVQNDRVERPQGGGGGGGGGQGQASADGEGKDEFVFQIS KDEYLDLLFEDLALPNLKKNQHRQLNEFKTHRAGFTSNGVPANISVVRSLQNSLARRTAM TAGKRRELRALEEDLETISRSEPVQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYE KRPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKE VDEHEFFYSQETGGTIVSSALKLMDEVVQARYDPAQWNIYAAQASDGDNWADDSPLCHEL LAKKILPVVRYYSYIEITRRAHQTLWREYEHLQATFDNFAMQHIRDQEDIYPVFRELFHK QSSKSEA >gi|289774647|gb|GG745514.1| GENE 23 25016 - 25492 250 158 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3123 NR:ns ## KEGG: Kvar_3123 # Name: not_defined # Def: lipoprotein # Organism: K.variicola # Pathway: not_defined # 1 158 30 187 187 296 99.0 2e-79 MAMKPTESGIVASSAKYSYRFVRDGVPQEYQRYKTFYERFHQQASGVRVNFVVEQHEVTA EYLVVMDQRKLDAGQHSELVNQYHAVQIDNDRLGVLFKATGFWTASDASDLAAAYQLAHP VVVSINDKTKTISSLGAVAMAPLFPFYMMYGCAIGPCV >gi|289774647|gb|GG745514.1| GENE 24 25738 - 26220 489 160 aa, chain + ## HITS:1 COG:PA2826 KEGG:ns NR:ns ## COG: PA2826 COG0386 # Protein_GI_number: 15598022 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Pseudomonas aeruginosa # 7 158 8 160 161 200 61.0 1e-51 MTPFYQLTATRLRGQPLSMADYAGKVVLVVNTASHCGFTPQYAGLEALYKKYAAQGLVVL GFPCNQFGKQEPGGADEIEQTCHVNYGVSFPMFEKVDVNGPAAHPLFRYLKQALPGVLGG RIKWNFTKFLIARDGTPLTRFAPLTTPEKMEASIVAALTR >gi|289774647|gb|GG745514.1| GENE 25 26342 - 26653 431 103 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3125 NR:ns ## KEGG: Kvar_3125 # Name: not_defined # Def: antibiotic biosynthesis monooxygenase domain protein # Organism: K.variicola # Pathway: not_defined # 1 103 1 103 103 203 99.0 1e-51 MIVRTWHGCVPLQHAEGFARHLEQTGVDHARGIPGNRGALVRQENQGEWVHFFLATYWQD LAAVKAFAGEDYHVAVTYPDDDAFELLSDPYVFQHEVEAVSPL >gi|289774647|gb|GG745514.1| GENE 26 26759 - 27646 497 295 aa, chain - ## HITS:1 COG:mll2784 KEGG:ns NR:ns ## COG: mll2784 COG0583 # Protein_GI_number: 13472475 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 288 2 291 307 136 34.0 4e-32 MNNKLTAIATFLRVAEAGSFSAAARQLGMKQSAVSQQIAALEQELGVVLLHRTTRAMMLT EQGEHYRRDMQRVLNAMQEAERRLNPAEPQFQGRVHVQLPSGLGSLLLPHLLALQKQYPE LHLMLSLDDRIADLVTEGVDVALRLGHEPPPSHAARVLARIETALFAAPGHYAVQSVDDL AACPHVRFSGLPLDAPLRIISADETRDVQVKTVFRANTSDALLQALESGIGIGGMQRPLA AWALRAGRLVPILADWRLPDRFLYAVYPDARFIPPRVRSVIALIEARLPELAVGS >gi|289774647|gb|GG745514.1| GENE 27 27744 - 28796 866 350 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3127 NR:ns ## KEGG: Kvar_3127 # Name: not_defined # Def: NAD-dependent epimerase/dehydratase # Organism: K.variicola # Pathway: not_defined # 1 350 1 350 350 698 99.0 0 MNKTSSQVALVAGSSGIVGRQLVNTLLHRGWEVIGLSHRALSQPGAIPMIHVDLRDARHS AQALQPLSTVTHIFYSAWMNAGNWSEMVEPNVTMLRNLVSHVEQNAPLQAVSLMQGYKVY GAHLGPFKTPARESDPGVPGAEFNAAQLAWLRHFQQGKTWHWSAIRPGVVGSPVPGNAMN LALSIALYASLCKALGLPLRFPGTLTTWHSIVDHTDADLLAEATLWAATSPAGENEAFNV NNGDIWRWCELWPRIAQWFELECAPPVRLSFHQLFNDYRAVWRELAGERLVEADILRLSD GQFADFVFGWQYDMFGDGSKLRRAGFQRMQATDEMFFSLFSQLRTARVIP >gi|289774647|gb|GG745514.1| GENE 28 28806 - 29687 743 293 aa, chain - ## HITS:1 COG:SMc03122 KEGG:ns NR:ns ## COG: SMc03122 COG0583 # Protein_GI_number: 15966724 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 1 280 1 287 315 170 37.0 3e-42 MTAEFNWDDARIFLAIARAGTLSGAADKMNMGIATVSRRLDRLEQSLKVPLFSRHQSGYR LTDDGEALLARAEALEYAGLAFGEAAQLQGHVAGVVRLATSDNLATHFILPSLKGLLDHY PDLRVEVLSGVQPVNLHRRDADLAIRMVKPDAGHLTLKRLGTVGFGVYGAASYLAGADGL SLSEADFVGWPETHQHLPAAQWITRTLRGRPCKVEANTLVAQVSAVSAGLGLGVLPHFMA RANGLQCLLPEIGADQTLWLVMHSDLAGSRRVRVIADHLITLFADHQDRLALP >gi|289774647|gb|GG745514.1| GENE 29 29863 - 31053 1275 396 aa, chain + ## HITS:1 COG:STM1522 KEGG:ns NR:ns ## COG: STM1522 COG2814 # Protein_GI_number: 16764867 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 6 390 1 382 396 144 32.0 2e-34 MKEIALPLNPTPTRVWIAVIALGICAFSIVTSELAPVGMLSALAADFHQTESGMGLAVTA YGWVGALAALLSGAMPARISRKALLVGLMLTLALSCLAATRSYSMFALMSARMIGALAHG AFWALIGIVAAQLVPPHRLGLATAIIFGGVSAASVVGVPLASFIATLAGWRHAFLAVALL SLAAAAVLCSTLPALAASTPVRLGVYRDIFRNPLLCGLYGATACIITAHFAAFTYVEPLL ITLQGVPATALSGLLLLSGVSGLVGNVIAGKLIDRHLKGLIFASLLLSGGALALLGTGRL ALLPFCFSGLLLALWGAGIAIVFVGLQTWLLRSAGAVAQPASAIYVAIFNAAIGTGALVG GQLIATAGLSGMVWLAAGIMACSTLLIALLKTPSVG >gi|289774647|gb|GG745514.1| GENE 30 31050 - 32066 858 338 aa, chain - ## HITS:1 COG:no KEGG:KPK_3259 NR:ns ## KEGG: KPK_3259 # Name: not_defined # Def: acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase # Organism: K.pneumoniae_342 # Pathway: Penicillin and cephalosporin biosynthesis [PATH:kpe00311]; Metabolic pathways [PATH:kpe01100]; Biosynthesis of secondary metabolites [PATH:kpe01110] # 1 338 1 338 338 646 99.0 0 MKTIAIRGSAYAVGQQLGAFGREAWHTKIRQTALWQTVTALKTAEQTQRMRAAVQAQWPQ IWQELEGMAEGLQAPVDEVFAWNCRGDLVRSTSDGCTTLAGISAEGELIIAHNEDGFPQL RGDCAIVHVTPDVGLAFTSFAYPGSLCGHTFAVNEKGIVNTVNNIRAVHRPEGMPRQILA RASLNATTLDEAITLLTATPRAGAFHHTLGQMGDSRLFSVEATGSGSSVRELTATFGHAN HLIHPQLATIEQIVTGSSGSRQQRLDAWLATTPSLDGVTAKAMLSDQHDPLLPIYRLSAE DPDDENTLATAIFTLSATRVAWQVFTLDRENAVLQGSL >gi|289774647|gb|GG745514.1| GENE 31 32088 - 32816 560 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 241 1 242 245 220 47 3e-56 MSMVEFSAVAKNFGATQVLHDINLKIEAGEVVVIIGPSGSGKSTLLRCINKLEEISSGTL LVAGMHITDPHANECDIRREAGMVFQQFHLFPHLTALENVMFGPVRVRKQSKAAAREQAL ALLDRVGLRERANHYPAELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKV MRSLAEEGMTMVIVTHEIGFAREVASRLIFIDGGTIAEDGSPEVLLTASSNPRLQEFLQH VS >gi|289774647|gb|GG745514.1| GENE 32 32813 - 33469 730 218 aa, chain - ## HITS:1 COG:STM0829 KEGG:ns NR:ns ## COG: STM0829 COG0765 # Protein_GI_number: 16764191 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 218 1 219 219 269 69.0 2e-72 MNFDSRYIWDALPLLMQGLQLTLIISLSGLLGGLIIGLLAGTCRALGGTISKTVSLVFVE LIRGTPIMVQVMFIYFALPMVLPVRIDPVPAAIITIVINSGAYIAEITRGAILSINKGFK EASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEII AGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRIHIL >gi|289774647|gb|GG745514.1| GENE 33 33521 - 34273 651 250 aa, chain - ## HITS:1 COG:YPO2512 KEGG:ns NR:ns ## COG: YPO2512 COG0834 # Protein_GI_number: 16122733 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 24 250 22 247 247 265 58.0 6e-71 MTGLFNKLKLTLALVICSASFVTAAQDKITVGVDTAFVPFEFKQGDKYVGFDIDLWDAIA KKMHISYELRPMDFGGLIPGLQSRNLDVAMAGITITDARKQVVDFSDGYYNADLLIAVKS TDNSIAKFSDLTGKKVGLKQGTAAASFMKSKYKANYIEFPNIDNAYLDLQAGNLDAVVHD SPNVLYYVKTAGNGKVKSTGETDSILPQQYGFAMQKNSSLTPKVNQALQALRADGTYDKI YVKWFAKQPK >gi|289774647|gb|GG745514.1| GENE 34 34401 - 34955 424 184 aa, chain - ## HITS:1 COG:no KEGG:KPK_3264 NR:ns ## KEGG: KPK_3264 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: Benzoate degradation [PATH:kpe00362]; Metabolic pathways [PATH:kpe01100]; Microbial metabolism in diverse environments [PATH:kpe01120] # 1 184 1 184 184 349 100.0 3e-95 MINRLPPLAEQEWDERQRQLAEEIINGPRGALLPPFEPLLRSPELMAHAQRMGEYLRYRS ALGQRLSELAILLTARHWSQPVEWAIHAPIAREKGISAAAVRAIKQRRPPDDLRSDEQVI YDFCQQLHQQQKVSDSTWQQAVDLWGEKGVVDLIGINGYYSFLSMVMNSAQTPVPDTTDS LFSE >gi|289774647|gb|GG745514.1| GENE 35 34952 - 36280 1415 442 aa, chain - ## HITS:1 COG:SMb20277 KEGG:ns NR:ns ## COG: SMb20277 COG0161 # Protein_GI_number: 16264015 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Sinorhizobium meliloti # 1 435 1 435 447 531 61.0 1e-151 MSHVIHRSLRSTPIVASRAQGAYIFDAQGKPYLDACGGAAVSCLGHAHPDVLAAMHRQID QLAYAHTSFFTSDVVEQLAEHLTRTAPGELNYAYFVSGGSEAIETALKMARQYFVEIGQP SRTRFIARKQSYHGNTLGALAVGGNEWRRRQFAPLLMDVIRVSACNEYRDRRADETQQQY TERLLNELEQAILEAGPETIIGFCAETVVGATTGATPPTPGYLKGVRRLCDKYGILYIAD EVMCGMGRTGTLHAFEQDDVVPDLVTIAKGLGGGYQPIGAVLASETIVSALKAGSGLFQH GHTYICHATAASAALAVQQVIARDNLLAAVKQQGAYLQQALREVLGELPHVGDTRGRGLF AGVELVRDKDSKTPFDPALKLHAAIKANCMARGLMVYPMGGTIDGQYGDHILIAPPFIIT PAQIDFVVDTLNSVIREETGKL >gi|289774647|gb|GG745514.1| GENE 36 36409 - 37266 992 285 aa, chain - ## HITS:1 COG:mlr5989 KEGG:ns NR:ns ## COG: mlr5989 COG1737 # Protein_GI_number: 13475004 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 17 279 20 283 293 133 32.0 5e-31 MNLREKIINEFGGLSPELQRAAEFSLQNASQLVVLSMRAFAAEAGVKPATLLRLAQRLGY RGWSELKSDFIDDLGLRNDTYVSKAEKMMARGTQTQLYKEVFQAHQANLTFTQNENAQEM EQAVTLLDSAENVYICGFRASFPIAWSLFYVYRLFNRQVSLIDGLASNIEVFTRELTNRD CVLLTSFAPYSRESLDVLRAARQAGAKILAITDSPVSPLAQAADCTLLFSIDSPSFFPSV VSGMGLAECLLAMLVVRHGREAVSKIESAERYLIDSGVYVIPGKS >gi|289774647|gb|GG745514.1| GENE 37 37493 - 38500 702 335 aa, chain + ## HITS:1 COG:RSp0590 KEGG:ns NR:ns ## COG: RSp0590 COG2207 # Protein_GI_number: 17548811 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Ralstonia solanacearum # 21 331 23 332 339 153 32.0 6e-37 MARNRTFSLNLRWRALLKDAGMEPEHLLRQAGLPDDTFSDINRGLTTDEYLRFWRVLEKE SDDQAFPLPFVERVSAEVFDPPLFAALCSTHMMQAVQRLAKYKLLIAPMVLETTVVQNGT LTVSPRWLGATEIPASLEVAELAFLLRLNRLATREPVQAVKVTLSKPLTRQQTHHFSAFF GTTIQHGKRATISFAAADALRPFLTVNEGMWQVFEPELQRRLSQLSDQASTAERVHAVLL ELLPGNDASIDNTAQRLGMSKRTLQRRLEQEGENYRALVHACREALARHYLLNTTLSGYE IAFLLGFEDPNSFYRAFMAWTGQTPETLRDMMRLN >gi|289774647|gb|GG745514.1| GENE 38 38510 - 39433 749 307 aa, chain + ## HITS:1 COG:RSp0589 KEGG:ns NR:ns ## COG: RSp0589 COG1028 # Protein_GI_number: 17548810 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 35 307 4 276 276 357 65.0 2e-98 MARFASIVAHRASDTAPDSRHTQRSLLAEVLMFIQEKKTALVTGASSGMGKAIARRLIQE GYQVYVAARQLGKMDDLASLGAQCLQMDLSRQDDRLAVVNTILSQTGGVDVLVNNAGFGL YGPVEEIGIDEARYQFEVNLFGAAHLTQLLLPAMRARRRGYIVNISSMGGKMYSVLGAWY HATKHALEGWSDCLRLEVADFGIKVVIIEPGVIETGFGDAASESIVKRSATGPYGQLVKG VALSIQKTYGHGTGSDPQTIAEAVLVAVKASNPRPRYAVGKYAKLLIRMRVWLGDRLFDR IILSQMR >gi|289774647|gb|GG745514.1| GENE 39 39447 - 40382 783 311 aa, chain - ## HITS:1 COG:VCA0991 KEGG:ns NR:ns ## COG: VCA0991 COG0583 # Protein_GI_number: 15601744 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 1 298 1 299 308 223 38.0 5e-58 MGKLEDMALLVAVAEAGGLSAAGRRLSLSPATMTARLKAMEERYQTRLFHRSTRAITLTR AGEDFYHAARRVLEEARHAESLLTQKEGVLSGNIRLSAPSDFGRQYLSPAIVDFSRRHPE VTFSVFLGERVEDLVANRLDMSIRVGNLPDSSLAIRHIRPNHRVLVASEAYLATHGTPAS LDELHHHRCLALERHGVVMNEWRFEEAGKERVVRVTPAMVCDDGALLRQWALSGAGIAGK SWWDVKRDVEEGRLQVLFAERFTGFSPLDRKEVGLQFVFPQRKLQPPQVSAFMAFFIDWL GESSPSSARRR >gi|289774647|gb|GG745514.1| GENE 40 40483 - 41592 1067 369 aa, chain + ## HITS:1 COG:VCA0993 KEGG:ns NR:ns ## COG: VCA0993 COG1902 # Protein_GI_number: 15601746 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Vibrio cholerae # 6 362 4 360 367 431 58.0 1e-121 MNSLSLFDRYRIGTLPLKNRIVMAPMTRARALQPGNIPSALMAEYYRQRASAGLIVTEAT QISPEGQGYSWTPGLHSAEQIAGWQLTTGAVHQAGGVIFSQLWHVGRMSHARFHADGQPV APSALAPDAQVWVVDEQGRGQMVDCPPPRALSRSDIQRIVADYRQAARNAIAAGFDGVEV HGGNGYLIDQFLRRTANQRTDEYGGSLSNRIRFAQEVLTAIGDVIGRERTGIRLSPYITQ RGMNDPQVIDAILALAAWCEQQSIAFIHLAEADWDDAPAVPQHFRDTLRATFSGTLIVAG NYDQQKAERILTAGFADLVAFGRPFIANPDLPQRLQHRWPLATVSDPATLFGGTEVGYTD YPFYTELKE >gi|289774647|gb|GG745514.1| GENE 41 41595 - 42188 389 197 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3141 NR:ns ## KEGG: Kvar_3141 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 197 1 197 197 384 98.0 1e-106 MTRKMLPASRSFAVVCAQARRGITLRRCANALLLAGISGSAFSAPQGLLKPAQLIVDSGL PPATRAANEYVARQYATFWNTGDEALARAALAGNFIDKTPPEGRRQGPEGAILASRAFRQ AVPDLRCDVEQMIVAGDRVVSHLHFHGHFTGTFGTRKGKGQNIDFIATDIYQISGGKIAA NWHIEDNLTLMKQLGAQ >gi|289774647|gb|GG745514.1| GENE 42 42278 - 43027 933 249 aa, chain - ## HITS:1 COG:AGpA300 KEGG:ns NR:ns ## COG: AGpA300 COG1028 # Protein_GI_number: 16119439 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 249 1 251 251 257 58.0 2e-68 MSKKLADKVALVTGGSTGIGLASAKALAEQGAKVYITGRRQEELDAAVRFIGPAARGIRA DAAVLSDLDAVFATIADESGRLDVLFANAGGGDMLPLSAITEAHIERIFATNVRGVVFTV QKALPLLTDGASVILTGSTAAVKGTANFSIYSASKAAVRSLARSWALEVNDRGIRINVVS PGPVRTPGLGGLVAEADRQGLFDALAASVPLGRLGEPEEIGRTVVFLASDESSFINAAEI YVDGGMAQI >gi|289774647|gb|GG745514.1| GENE 43 43195 - 44100 750 301 aa, chain + ## HITS:1 COG:AGpA302 KEGG:ns NR:ns ## COG: AGpA302 COG0583 # Protein_GI_number: 16119440 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 297 1 297 313 267 45.0 2e-71 MDRFSALKAFTRVVEAGSFTRAADSLDMPNATLSKTIKQLEAHLGVSLLQRTTRRITVTP EGREYYEKARCLLEDLEEIDASFNTAHNKPKGHLRIAIGGSTACDVLIPLLADFMTSWPD IRIDLQVADKPADLISGNIDCAIRGGPMDDSTLIARKIGEATLVTCATPGYLQRCGTPAS PDELHHGHQLISYLSPASGRAFPFRFTRHGVSTELKTEPHLGINESNAHIAAGEAGLGIV QTFTYSLKPALASGELVEILAAWRPAPYPFHVVYARHRHVPPRLRVFIEWLAAVFPAAVQ G >gi|289774647|gb|GG745514.1| GENE 44 44501 - 44746 118 81 aa, chain + ## HITS:1 COG:no KEGG:KPK_3274 NR:ns ## KEGG: KPK_3274 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 81 1 81 81 124 97.0 2e-27 MNFKSTLFPGVKTMTSTLRVRPPRDRVSSARKKQQSSIFSSKIIELNQRITNWRVSPVTG QLERRCRFSDSEDPQSRPFVA >gi|289774647|gb|GG745514.1| GENE 45 45062 - 47755 3465 897 aa, chain + ## HITS:1 COG:PA4825 KEGG:ns NR:ns ## COG: PA4825 COG0474 # Protein_GI_number: 15600018 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pseudomonas aeruginosa # 4 896 10 902 903 1377 75.0 0 MTVQIKNRNKKSTLSMRAAQEAQNGIAETLVNLNTTREGLQEAQANARLERDGLNEVTHD KPPHALIQLLMAFNNPFIYVLAILAGISFFTDYWLPTSHGEDGDLTTVIIIGTMVALSGL VRFWQEHRSAKSAEALKAMVRTTATVVRREHAGQKGTPREIPMRELVVGDIVQLYAGDMI PADVRLIESRDLFISQAVLTGEALPIEKYDTLGDVAQKSAHDKAVDNENLLDMPNICFMG TNVVSGTAQAVVVATGPRTYFGSLAKAIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVF LINGLMKGEWWDALLFALAVAVGLTPEMLPMIVSANLAKGAVAMAKRKVVVKRLNAIQNL GAMDVLCTDKTGTLTQDKIILEHHVDTHGQKNQSVLALAWLNSHYQSGIKNLMDQAVIYF SENESGFVQPQGYSKVDEMPFDFVRRRLSIVVKDSQSNHLLVCKGAVEEMLSIATHMEEN GKVIPLDDQRRDAMLALANDYNKDGFRVLVVATRDIPKAEAKRLYSTADEHDLIIRGFLT FLDPPKESAGPAIAALMDIGVAVKVLTGDNAIVTTRICRQVGLEPGEPVLGPQIEALSDT ALQQLVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGT DIAKESADIILLEKSLMVLEEGVIKGRETFGNIMKYLNMTASSNFGNVFSVLVASAFIPF LPMLAIQLLLQNLMYDISQLALPWDKTDKEFLSKPRKWDARNIGRFMVWIGPTSSIFDMT TFALMWFVFSANSEHMQTLFQSGWFVEGLLSQTLVVHMLRTQKIPFIQSTAAWPVLMMTG LIMAIGIYVPFSPLGPLVGLQALPWQYFPWLVGTLLAYCCVAQGMKTFYIRRFRQWH >gi|289774647|gb|GG745514.1| GENE 46 47831 - 48055 99 74 aa, chain + ## HITS:1 COG:no KEGG:KPK_3277 NR:ns ## KEGG: KPK_3277 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 74 1 74 74 110 97.0 3e-23 MEKQHSLIFLIKNKTIALIVLFLMKITRTLRVRALAWYAGGKINYQHTKALLNLASAIHR FSIRLLRFISLPAL >gi|289774647|gb|GG745514.1| GENE 47 48070 - 49722 2128 550 aa, chain + ## HITS:1 COG:PA4822 KEGG:ns NR:ns ## COG: PA4822 COG1283 # Protein_GI_number: 15600015 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Pseudomonas aeruginosa # 1 537 1 534 555 487 59.0 1e-137 MSGTTLLIHLAGAIALLLWGSHMISTALQRGFGTPLRNWMGRHLTNRWTALLSGIGITGI LQSSTAVSMMATSFTAAGTLSLAPALAVMLGANIGSTLVVQLMSFNMEIAIPLLLLAGFV VFKLRDHSSFESVGCALIGLGLMLLALHLLGGTLQDIEVTPVFHAVMQGLQGDIFIALLV AALLTLLCHSSVAMILLIASLAGTGTLTPSTALVLVLGANIGGALPPVLNAGSAVARRLP VGNLMVRLSGCALALLLLPLLMAIARKSGLNTPQLVVWFHTAFSVALALLFIGLNVPMAR FLERLFPEEERVGDPGMPMYLDDAGLEVAYIGLSNSVRESLRAADMLTIMLDRLLVLFVT QEKQAADDIRQLEQSVDLLSAAVRAYLADIGQDGLNDADADRAQEILMFIINVEHAGDIL SSNLTQLATRRARRGEQFNDFELHHIRLLHAELLTSLNLGIAAFLREDLSAAHQLVQRKE TIRQLEASASREHFKKLREDKNAWAESGDIFQRVLRDYRRVHHHIAAVAYPVIDRLGDTS LRFIETPPDV >gi|289774647|gb|GG745514.1| GENE 48 49788 - 50132 282 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3148 NR:ns ## KEGG: Kvar_3148 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 114 114 236 100.0 3e-61 MRVLICSGRFYADTHTITHVLDLYARTQTINVLIHGGHQALGGAIENWARGIDVHVIRYP ANWALHGKYAETRRNLFMLEDSRPDVLLAFPGGEDTAECIKMAKNRGIRVIDVV >gi|289774647|gb|GG745514.1| GENE 49 50459 - 51592 172 377 aa, chain + ## HITS:1 COG:mll8158 KEGG:ns NR:ns ## COG: mll8158 COG0654 # Protein_GI_number: 13476746 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Mesorhizobium loti # 2 347 6 362 410 76 29.0 8e-14 MTSSIAIVGAGLGGLMLARVLHVHGISSVVYEAEASPEARPQGGLLDIHDHNGQRALIAA GLYDAFRALILPGGQSTRVLDKAGNVLFEQFDDGLGGRPEVSRGALRTLLLESLPADTVQ WGRKVADIVPHDDGTHSLYFTDGATTRASLVVGADGAWSRVRALVTDAVPAYAGFSYVER WLSHVDTDHLACAQAVGRGSFFALSPGKGIMAHREPGGVIHVYIALCQPQAWFADVTSAN AQVDVQRIVDEFDGWAHPLQTLITEGDGEPVLRPIHFLPPGLRWPRTAGVTLLGDAAHLM LPFGEGANLALEDGAELGLAIAANADNPEAALSAYEEQMFIRVESAANDAQAMAGILFGD ETPGALLHFFNQYKTGS >gi|289774647|gb|GG745514.1| GENE 50 51736 - 52323 252 195 aa, chain - ## HITS:1 COG:AGl1301 KEGG:ns NR:ns ## COG: AGl1301 COG1309 # Protein_GI_number: 15890777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 167 49 211 261 122 42.0 3e-28 MAKIQRDQVINAALALLDEVGLEAITTRKLAQKLGVESATLYWHFRNKASLLEEMAATVL ARHHSLPLAEDTAEWADWLANNARSFRRALLAHRDGALLHAGTTPARVGGETFYPKVAYL MRAGFSEAEAAMILLTISEYTLGCVLEEQSRTDRHDDERLSTPSTEISRIDALTHQHPDT CFEFGLSLIMKGLLK >gi|289774647|gb|GG745514.1| GENE 51 52489 - 53931 315 480 aa, chain + ## HITS:1 COG:BS_yhcA KEGG:ns NR:ns ## COG: BS_yhcA COG0477 # Protein_GI_number: 16077966 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 31 433 18 418 532 184 28.0 2e-46 MNINRDTQVKKTNHAGPINAIPPVLWLQAAIITLGAFATMLSSTMLSAALPAMANGLGVT DASIQWIATAYLMALAAGVPVSAWAVKRFGATQLWLYALILFGVFSAVCALSPNVEVLLT ARIMQGLAGGLLVPAGQTILGLVVGRERLGRIIGTIGVAIVIAPLLGTSLGAVLLQVCGW RVLFFINVPLSLCAWLAGWKLLPRPTIKNDKPLSLDWMGLILILCSLPLLMEGIKGVSLN SGENSGNIILLSVGALFIGLFIYRSFRIDSPLLHLSLFKHRGFTLSALLMAIGGAVNFGG QFLLPLYFRDVCHEALADVGLLLTPQLIGSATGFPVAGYFSDRLGPRVVLIVGGLLSVLA TWPLAMIDGGSSYLLVGSALAIRGFGLALATVPAMAAGLAMAGTRHVSDAAPILNILQRV GAMAGAALVTACYVRLAHTQGSLAAFQHAGWILISGAILLTLSALFMVNHQGSSTREETR >gi|289774647|gb|GG745514.1| GENE 52 54054 - 54839 844 261 aa, chain - ## HITS:1 COG:AGc1817 KEGG:ns NR:ns ## COG: AGc1817 COG1028 # Protein_GI_number: 15888333 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 256 32 288 293 216 48.0 3e-56 MNLQIQQRVALVCGAGSGLGQAIACSLAQEGVKVAVTGRNREKLAQTVERITQLGGTARA WPLDFAVPEQFDTVIADIREHWGDIDILVNNSGGPPPTLAQGTDGAVWQQQFSVMVASLI LLTDKLLPAMRSRGWGRIITSTSSGVIAPIPGLALSNALRMSLLGWSKTLAAEVAADGVT VNVMVPGRIATDRVGQLDAIKAKREHSTAEAVAEKSRLSIPAGRYGHPHEYGATAAFLAS QPASYITGAVIRVDGGLIGSV >gi|289774647|gb|GG745514.1| GENE 53 54891 - 55787 748 298 aa, chain - ## HITS:1 COG:AGpA716 KEGG:ns NR:ns ## COG: AGpA716 COG1802 # Protein_GI_number: 16119713 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 287 46 322 333 283 54.0 2e-76 MQPDSTASSRRIARQILDLISEARFDPGHHLREQHLADALGVSRTPVRAGLKELTRMGAV EARPNQGFFLLKRSNELDQLEIEQSKSNDQKLYEQLVHDRIAGILPESFTQTEISQRYDV DRGVLTRTLVKLSEDGLIARNAGHGWRFLQTLNSDIALRNSYGFRLMIEPMALLTPNLHV DRQMLKRLRTRHLRLITHPDITQVPAKEIFETDAAFHELLAEASGNLFVLQAIQQQNRLR RLLEFGSYHNKRRVKEWCEEHVAIIDALRENKQEQAAELMRKHLQYAFDQVNVKSPRV >gi|289774647|gb|GG745514.1| GENE 54 55980 - 56792 997 270 aa, chain + ## HITS:1 COG:AGpA714 KEGG:ns NR:ns ## COG: AGpA714 COG0834 # Protein_GI_number: 16119712 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 32 270 30 268 269 286 59.0 2e-77 MSSNSFLFRHVRTLMFALTALPLVSHAAVETIAKGQLTYGTAATFMPFEYVKAGKLTGFD IDLINALSKEIQLTPAPMPMEFKGLIPALQGKRLDIINSAMYVNPTRAEQVDFVPYLKIG SRVVVRKGNPANITGRDLSLCGKNIAVTLGGIEESQARADNQRCVEAKKPAINVMTFPAA TDSAVAVAQGRADAEFLSTPGTVALFTEKAGMFEAVGAEFEANTHIAFAVRKGDTATQAL LEQGLQRLVKNGTYTQLIKKWNFPDSVSLF >gi|289774647|gb|GG745514.1| GENE 55 56820 - 57545 825 241 aa, chain + ## HITS:1 COG:AGpA713 KEGG:ns NR:ns ## COG: AGpA713 COG0765 # Protein_GI_number: 16119711 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 224 1 224 242 266 67.0 3e-71 MSIDLMWQYFLSPEFIRGAWMTLLITLCSLLCGVVLGLVLALLQEAPFRAGKGLAFFYLW LFRGTPVLFQIIFVYNVLPGFGLRFSAFTCAVLALSLNEGAYMAEILRSGLQAVKSGQRT AGMALGMTHGQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLVANQAAS ASFRYFEALCAAGIYYLLLTSLFMIFQSWLERVLDPRQRRSKSQKRLTRLFKLPKTVREE P >gi|289774647|gb|GG745514.1| GENE 56 57542 - 58282 523 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 244 1 242 245 206 43 6e-52 MSEKPLLEMIGIDKTFGRQTVLKNCSLTVQRGETVVLIGPSGSGKSTLLRCVNMLSPADS GDVFFASQHISRGDVPAHKLRQRIGMVFQNYELFSHLTAAENIMLAPMAVLGMNRIDARK LADNLLAKVRINERADHFPDELSGGQQQRVAIARALAMKPELMLYDEPTSALDPEMIREV LEVMAELSAEGMTSMVVTHEMGFARRAANKILFMEDGEIIDRANTSDFFAGHVSDRAQRF LTQILH >gi|289774647|gb|GG745514.1| GENE 57 58296 - 59471 1149 391 aa, chain + ## HITS:1 COG:AGpA709 KEGG:ns NR:ns ## COG: AGpA709 COG0624 # Protein_GI_number: 16119709 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 389 6 387 387 503 64.0 1e-142 MSSYQVDSARMKKDLATLVAINTENPPGHEREAAECLEGWLLTAGFDLSFSEYAPGRTNV IAVLNNGPGPCFAFNTHLDTVPAGSGWASDPFTLTERDGRLYGRGACDAKGPLVAMVEAL RLLAANRQQWSGTLMGVFTADEEVASEGAKFYVRDNPPAIDFAVIGEPTSNATFSAHKGS LRPRVRVKGVTAHSGTPELGVNAIYQSARLLGLIEEAHHQQVRCRCHDLVGNASLTVTRI HGGHADNVVPDSCELLLDRRMVPGEDEEVVKAELQQLLDHAYAHAGVEAEIIAWQPTTGG ATQTDSREAIVEQSLAACRRHGQSEPGPFGFQGGCDLVHFRSLGAKGVVIGPGSLAVAHK PDEFVPVDEFIAAAYLYLDIALAMLPPEPGL >gi|289774647|gb|GG745514.1| GENE 58 59468 - 60568 990 366 aa, chain + ## HITS:1 COG:AGpA707 KEGG:ns NR:ns ## COG: AGpA707 COG4948 # Protein_GI_number: 16119707 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 73 361 8 297 299 269 51.0 8e-72 MKAQLFRGDLHYADVTLHTAASGPVTALDTLWLRLEDQGVTGIGEVRLNIRYLHGYREEQ VLNNLLQILRRWDWRQAPAARLAALDDEDCTLLPPSRMVLDMALHDLLARQQGVSVAAWL GARDGLPAWHTNQTLFWGSERQMLEQAQRYVVRGFTQLKLRTGVADFATDLARLQRLRQR FGQQISLAIDVNGQWSLAQAHAAFPSLRELKLSYIEQPLSPANDSQLAELYPYGIPIMLD ESLNSDAAITRLIAAKGALWGHLKLVKLGGLAPTLAAANRLRLADVPFMIGQMNEGHAAT AAALQLCRVVQPAFAELYGADGLTDDPVSGLEYRNGLVTVNDSPGLGVQFNAAQAHLLQE FTHARC >gi|289774647|gb|GG745514.1| GENE 59 60555 - 61724 1343 389 aa, chain + ## HITS:1 COG:AGpA704 KEGG:ns NR:ns ## COG: AGpA704 COG0006 # Protein_GI_number: 16119706 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 389 5 389 389 585 72.0 1e-167 MQDVNNVIQGSESAFSADEYAQRIRRTRERLSRAGVDVMIVTGPENIFWLTGQQTPGYYT FQALLLPVEGDPVFVIRQLEYFNFIANTFISDAAIYQDGDNPVDFLVGMLQQRGWLHKRI GLDKRGWFLPVAVYEALQARLGTIADTAGVIEPLRAVKSAAEVEKIAIAARYVDAGMRAG MAAIRRGADENALVAAMMGAAIAAGSEYVGMEPLVSTGPRSGVPHGTWRRRVMQDNDPVF LEMSAAHDRYHAAMMRSAWLGRPPAIAIEMEKVCQEALQASLDAIRPGATCEAPHLACQK VIDRAGFTENFKKRTGYSIGIAFAPDWGEGGILSLYRGVTTELQPGMTFHIPPALRIYGQ FTVGVSETVVVTETGYRQLGSLARPLTLL >gi|289774647|gb|GG745514.1| GENE 60 61735 - 62658 1184 307 aa, chain + ## HITS:1 COG:BS_dapA KEGG:ns NR:ns ## COG: BS_dapA COG0329 # Protein_GI_number: 16078740 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Bacillus subtilis # 19 295 11 290 290 110 28.0 3e-24 MKDINECRERLRGIFNITVTPFTVSGAIDFPALRENIERVIGLGYDGLLIGGTYGEFPVM TVEERRELFHQVMACVDDRVAVMLCSASADPRDARELTLLASELGGLPMVTAPFVSEITD QQIVSYFKEMAPLSKTGILVYNAPGIGITLSPALLEQLAEIPNVVGIKQGDLNPTAIDQI ANRLRGRLRLFCASDLAFLGPMMAGFDGISTTNSGALPELIINTFRAVEQGDAATARDLH QLWYAYRALARKHGQPQLVKAAMALRGFNGGTVRAPLKPIDDAALAELTHVMSALASDSR SGVTLVR >gi|289774647|gb|GG745514.1| GENE 61 62642 - 63739 960 365 aa, chain - ## HITS:1 COG:AGpA703 KEGG:ns NR:ns ## COG: AGpA703 COG0504 # Protein_GI_number: 16119705 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 365 1 404 407 152 35.0 1e-36 MSPIFILDNTSAPARYGITASLWANRLGLPLWSLRPDFAGDVPDSHQHVIRAGYCVTSGL WRSDTLREEVRDIASLPESDAVIVLASSQAALIADLPGQRLFSDDRNQRLTLSDGQHTVL DLTADRYGRWDAGEPSSAGTSLRIALIGRESDHRLVYPATLGSLGDAAASLGLKLDVHFF APVSLSPGLHDLHDVQGVVLPGGSSMAAVKGQIRVAEDTLARGQPTLGLCLGMQSMMTAV VRRRPGCESAIPAEVAPDEALHSFVPFVDGRHRCGVFPFSFGLIPGDIREMHYNHRYCFN TDLLPALDRSGVSVSAQTDDIVEAISQPELPFWHGVQGHPELMSRPDAPHPLFVAFLRAA LNAQA >gi|289774647|gb|GG745514.1| GENE 62 63808 - 65016 1146 402 aa, chain + ## HITS:1 COG:SMc04386 KEGG:ns NR:ns ## COG: SMc04386 COG0436 # Protein_GI_number: 15967044 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Sinorhizobium meliloti # 5 401 13 409 410 389 49.0 1e-108 MNNSQIARRMQSVRPSPTAVISDQVRALEAAGKPVINLGEGELDFATPAHISYAGIEAIV HHQTKYTAVSGTAALKEAIAAKFARDNQLHYRPQEIIAGSGAKQLIFNAFLATLDAGQQV IIPAPYWVSYPDMVSLADGEPVIVPCDEQNGWKLTPQQLAAALTPSTRWLILNSPGNPTG AIYSEQELRALAAVLADYPQVLVMADDIYEPLRYDNIPFTTFAQAAPQMVSRTLTVNGVS KSHAMTGWRLGYAGGPQWLIAAMQILQSQSTSNPSSISQAAAVAALNHSANFFDGWLNVL DKRRQQVLGMIAATDGLSATAPQGAFYVFANCQALMGRMTPGGEILRNDSALANWLLEQT QVAVLHGSAFGMPGYLRIAYAIEDGLLTQACQRIAGACAQLR >gi|289774647|gb|GG745514.1| GENE 63 65403 - 65990 310 195 aa, chain + ## HITS:1 COG:no KEGG:KPK_3296 NR:ns ## KEGG: KPK_3296 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 195 7 201 201 369 99.0 1e-101 MKTANFSELIKIAALQLFREKGFSNVSTRDLTQKMNISRSHIYHYYRDWETLKKSTIQYM FENDIQECHAFLNASEKMSASERVNLYIRTLLPDAPSAHWLLYLELWPMAARDADYAKLV HDYSLQWITILEGIISVGMQEGEFLAENAATSARQINTLIDGYSSLLILDYSEDRRSIFL NEISELAFKILKKDF >gi|289774647|gb|GG745514.1| GENE 64 66017 - 66793 388 258 aa, chain - ## HITS:1 COG:no KEGG:KPK_3297 NR:ns ## KEGG: KPK_3297 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 258 1 258 258 510 100.0 1e-143 MKIFFQGTRLKKAKILTVAFSFAFFTASVQAKSSQSESYNVAVYRGEAGCPGCSEMVVKS LVATGLPLHISYVGEKEKLKLNAQTLKKFDLYIQPGGGQDIPGSYQALGDEGAEAIRNFV KSGKSFLGLCMGAYLADKDWIGLIDAPLESEVGRPGSQAVDEGDYTLQLTWNNKQEPFYY QDGPYLNSSISSTGFQPIAYYKNGDIAIGKYRYGKGNIILSGPHPEADETWIDSAAPGNT TAESKMQRILSYLNIKKG >gi|289774647|gb|GG745514.1| GENE 65 67287 - 67706 211 139 aa, chain + ## HITS:1 COG:STM1998 KEGG:ns NR:ns ## COG: STM1998 COG1974 # Protein_GI_number: 16765334 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 137 1 137 139 167 62.0 7e-42 MQFTRPTEISPPLMLPLFSERVPCGFPSPAQDYVEDRLDLNKLLIKHPSATYFIKVSGES MRDAGISDGDLLVVDRSLSAVHGDIVIAAIAGEFTVKELRTHPFLQLVPHNRDYASISFH NAEELEIFGVVIFSIKAHK >gi|289774647|gb|GG745514.1| GENE 66 68741 - 68971 83 76 aa, chain + ## HITS:1 COG:STM1997 KEGG:ns NR:ns ## COG: STM1997 COG0389 # Protein_GI_number: 16765333 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Salmonella typhimurium LT2 # 1 72 346 418 422 117 72.0 6e-27 MLADFFSNGIAQLNLFDDNAPRKNSAALMDVIDQLNQSGKGKVWFAGQGIEKSWAMKREM LSPAYTTRYSDLPVAK >gi|289774647|gb|GG745514.1| GENE 67 69235 - 69477 451 80 aa, chain + ## HITS:1 COG:no KEGG:KPK_3301 NR:ns ## KEGG: KPK_3301 # Name: not_defined # Def: putative virulence protein MsgA # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 80 1 80 80 137 100.0 1e-31 MFVELIYDKRNFAGLPGARETILNELTKRMQRIFPEAEVRVKPMMTLPAINTDASKHEKE LISRTVQEMFEEADMWLTEE >gi|289774647|gb|GG745514.1| GENE 68 69648 - 70784 996 378 aa, chain - ## HITS:1 COG:rfaK KEGG:ns NR:ns ## COG: rfaK COG0859 # Protein_GI_number: 16131494 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 23 354 2 330 357 83 22.0 6e-16 MHDATMQGSPRKKFNKIRELNRRRNYFTKKVRNALRVGVAKALWDRRRRQPVDLSSAKTV LLMRNEGAVGDVVVDSALVKCLHQSGYIVDFLLTTSNSQVMRYNPRIRHIYEAEPVNSAD FLRKFNHNVPRDVINELANNKYDIIIDPSLFDIPVHRLRLFRQIKAKSVLGFNKWPSIKH YSHSFDFDCQRWHVTKTFALIADYLQLDTRALDTYDLAVPGPIMQEVAQYLASLSGKAVV INIFAGHADRSLSQTQLAELLDKLRARHPGLAVILLDHRREIRISLPPEVVINPFNTLHH AMALIAQAELIISPDTSVVHMAAAWNKPLIAVYKDVLLNNRLWAPGYDNARQIIVKCGKV HQHRELVDRIMAALPETL >gi|289774647|gb|GG745514.1| GENE 69 71034 - 71534 574 166 aa, chain + ## HITS:1 COG:STM1282 KEGG:ns NR:ns ## COG: STM1282 COG2606 # Protein_GI_number: 16764633 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 165 1 166 172 245 75.0 3e-65 MLEAVEGNIHQRLCALLDEHQARYRVMAHDAVGQCEAVSAIRGTALGQGAKALVCKVKGN GVNQHVLAILAADQQADLASLARHIGGSKASLASPAEVDALTACVFGAIPPFSFHPALRL VADPLLFERFPQIAFNAGRLDRSIILDTEDYLHIARPEIATFRRLS >gi|289774647|gb|GG745514.1| GENE 70 71652 - 72098 726 148 aa, chain + ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 147 1 147 148 179 89.0 2e-45 MFDTTLLILLGLAALGFISHNTTVAISILVLIIVRVTPLNTFFPWIEKQGLTVGIIILTI GVMAPIASGTLPPSTLIHSFMNWKSLLAIAVGVFVSWLGGRGVALMGTQPHLVAGLLVGT VLGVALFRGVPVGPLIAAGIISLFIGKS >gi|289774647|gb|GG745514.1| GENE 71 72082 - 72873 993 263 aa, chain - ## HITS:1 COG:STM1279 KEGG:ns NR:ns ## COG: STM1279 COG2207 # Protein_GI_number: 16764630 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 254 1 254 264 340 75.0 2e-93 MIGLGLDGYEPDSGHESAIAFRIQVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMWM VPPQYAVWVPGQLSHSNRATPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAER GGELLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKIRQMVTMMAEDPARWQTLSQWA AVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAFI TMFKKGLGQTPGRYHGSLATTSQ >gi|289774647|gb|GG745514.1| GENE 72 72974 - 74158 1571 394 aa, chain + ## HITS:1 COG:ECs2500 KEGG:ns NR:ns ## COG: ECs2500 COG2807 # Protein_GI_number: 15831754 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 392 1 392 393 479 78.0 1e-135 MSSVISSTGRRPALLIAGILLIATTLRVVFTGAAPLLDAIRSDYGLTTAQTGLLTTLPLL AFGLVSPLAAGVARRFGMERSLLLAMLLICAGIALRSLPSAALLFIGTAVIGCGIALGNV LLPGLIKRDFSQHVARMTGAYSLTMGGAAALGSALVVPVAMAGFGWRGALLLLMVFPLLA ILSWLPQSRRRAEAPLTGSGAMHNRGIWRSALAWQVTLFLGINSLVYYVIIGWLPSILQS MGYSEAQAGSLHGLLQLATAAPGLAIPLILHRLRDQRGIAVLVALMCAISAAGLWLLPGL AIGWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD ANGDWHIPLLAVALISLVMAVCGALAGRDREIHS >gi|289774647|gb|GG745514.1| GENE 73 74190 - 74882 873 230 aa, chain - ## HITS:1 COG:PA2268_1 KEGG:ns NR:ns ## COG: PA2268_1 COG0504 # Protein_GI_number: 15597464 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Pseudomonas aeruginosa # 4 227 8 232 246 202 49.0 3e-52 MKTPLRLALVGDYHPDIVAHQAIPLAIDDAAAVLEQPVKYDWLATPSIVSGEALAEYDAI WVVPGSPYRHPQGAFTAIRYARENGIPFLGTCGGFQHAVIEYARNVLGWQDAGHAETDSE GRMVIAPLSCSLVETSAVVELRANTLIARAYGRESIEEGYHCRYGVDSAFAGELEQGDLR VTGWDEEGEIRAVELVTHPFFVATLFQHERHALDGRPSPLVQALIRAAAQ >gi|289774647|gb|GG745514.1| GENE 74 75028 - 75537 455 169 aa, chain + ## HITS:1 COG:SMc00850 KEGG:ns NR:ns ## COG: SMc00850 COG1683 # Protein_GI_number: 15964609 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 157 1 158 172 166 55.0 2e-41 MKSKLLVSACLMGFQVRYNGSEKAQLAATLSRWQQTGRLVIHCPELAAGLSTPRLPAEIV GGTGGDVLAGRARIVESDGRDVTGHYQLAAWLALSAAREAGCQAALLTDGSPTCGSQFVY DGSFRGRRRAGAGVAADLLRAHGITVFSDGQIPQLLAWMAQREQDDDSM >gi|289774647|gb|GG745514.1| GENE 75 75524 - 75880 391 118 aa, chain + ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 2 114 10 122 122 160 70.0 4e-40 MIQCKRVYDPQESSDGYRVLVDRLWPRGIKKEALACDEWCKALTPSAELRKAFHGEAIDF AHFSQRYRQELDAHRETGLRLAALAQRQPLTLLYAAKNTEQNHARVLAAWLAALPVTI >gi|289774647|gb|GG745514.1| GENE 76 75870 - 76109 292 79 aa, chain - ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 1 77 1 81 84 94 70.0 6e-20 MKKLLAILPLVLAGCAQPQSTAPTKTIGMANPASVYCQQSGGTRVPVQTPQGVSTQCKLP SGETLDEWALWRRDHPAKS >gi|289774647|gb|GG745514.1| GENE 77 76411 - 77424 1225 337 aa, chain + ## HITS:1 COG:yeaP_1 KEGG:ns NR:ns ## COG: yeaP_1 COG2203 # Protein_GI_number: 16129748 # Func_class: T Signal transduction mechanisms # Function: FOG: GAF domain # Organism: Escherichia coli K12 # 1 167 44 210 210 209 60.0 6e-54 MSDFILARVSQTLAAEQSLETLVRQLLEMLEAVTRMESTYLTRIDINAQRQQVMFAHNSS EMQIPEGFSVPWDESLCKRALEDQCTFSNDVAHRWHSCIAAQELGIATFLSIPVRLADGS LFGTLCATSRQKQPYNLEGEQVMGLFAKLISHYVEKDTLVQQLQAANVALELHSSTDELT QLPNRRALFKQLALRFASARAQQQQVSLIFIDLDGFKAINDRFGHPCGDSFLVQVGERLT AVARREDIVGRLGGDEFLIVGSAQDPAAQQAYVTILRQALCGVYFLGEQRIDYEGASFGV IICDPQSIDVEAALRAADEAMYQDKKSRRQENFIHID >gi|289774647|gb|GG745514.1| GENE 78 77482 - 77583 61 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLGILFPVAIFIIAVVFLGWFFVGGYAAPGGA >gi|289774647|gb|GG745514.1| GENE 79 77962 - 78225 400 87 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3189 NR:ns ## KEGG: Kvar_3189 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 87 1 87 87 159 100.0 3e-38 MILQKLLSNKNCKKYCLSLAAVFAIALAVVGRATFGGVVSEYNMPYSEWTTSMFFLQGAM VTVYSIVFTALFAIPLGFIFLGDERQD >gi|289774647|gb|GG745514.1| GENE 80 78356 - 78994 980 212 aa, chain - ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 271 73.0 6e-73 MFAEFGVLNYLTYLVGAVFIILVPGPNTFFVLKTGIAHGVKKGYLAAAGVFIGDAVLMFL AFAGVATLIKTTPVLFNVVRYLGAIYLLWLGGKMLYAVLTQRDGQADASAEPASAILKRS LTLSLTNPKAILFYVSFFVQFIDVNAKAPGVAFFILALTLEVISFCYMSFLILSGSFVTR YVKTRKKLAKLGNSLIGLVFVGFAARLATLQS >gi|289774647|gb|GG745514.1| GENE 81 79084 - 79998 1347 304 aa, chain - ## HITS:1 COG:STM2401 KEGG:ns NR:ns ## COG: STM2401 COG1560 # Protein_GI_number: 16765727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Salmonella typhimurium LT2 # 5 304 7 305 306 463 72.0 1e-130 MACVFNKQLLHPRNWLTWFGLGILWLIVQLPYPLLHFIGTSAGRLSRRFLKRREHIARRN IELCFPDMSPAARETLIDQNFMSLGMGLIETGMAWFWSDERVKKWFDVEGFANLNHALSG GKGVMVVGVHFMSLELGGRAMGLCRPMMATYRPHNSPLMEWVQTRGRLRSNKAMIDRNNL TGLVHALKSGEAVWFAPDQDYGPKGSVFAPFFSVPQAATTNGTYVLSRLSGAKMLSISMV RKLDRQGYSLHISEVMNDYPGEDKQIAAGYINKVIEREILRAPEQYLWVHRRFKTRPLGE PSVY >gi|289774647|gb|GG745514.1| GENE 82 80655 - 81698 1109 347 aa, chain - ## HITS:1 COG:STM3598 KEGG:ns NR:ns ## COG: STM3598 COG0252 # Protein_GI_number: 16766884 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 547 82.0 1e-155 MNFRALLTIALLTMSSLAFSETRLPHIVILATGGTIAGSAASNTQTTGYKAGAIGVQTLI NAVPEMSKIAHVEGEQVANIGSENMTSDIILELSKRVNALLARDDVDGVVITHGTDTLDE TPYFLNLTVKSNKPVVFTAAMRPATAISADGPMNLLEAVTVAADPDARGRGVMVVLNDRI GAARFVTKTNATSLDTFRAPEEGYLGVVVGGKPQFETRVDKIHTLRSVFDVRQLKTLPKV VIIYGYQDDPEYMYDAAIAHHADGIIYAGTGAGSVSVRSAAGIKKAQQAGIVVVRASRTG SGVVPPDDSQPGLVSDSLNPAKARILLMTALTQTKDPQLIQQYFHTY >gi|289774647|gb|GG745514.1| GENE 83 82007 - 83215 1367 402 aa, chain + ## HITS:1 COG:CAC2837 KEGG:ns NR:ns ## COG: CAC2837 COG2206 # Protein_GI_number: 15896092 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Clostridium acetobutylicum # 22 361 42 386 417 201 34.0 3e-51 MRIALKSALMLTTRVIQIINPELHRHMQRTALIALTLAQRLGLPAERQQTIFCAALLHDI GVLGDKRTIHSLDAIDNIHDPHQRQGAAMLEGLVTFLPIVPFIRDHHFSPDHRGSREQHI VYFADAFERLLPAGSHVAGWPTRAVVEQFVSLHREIDPPLCDMLCEVAENANFWQHLHPG HIQRLLEIIGPINTLYLDIHGLKDICLLIAKIVDTYSSFTATHSIMVGEIARQLARWMQL PEPICQQIQIAGYLHDIGKISIPLSILEKEGELDEDELNQVREHSYMTGEILSDYSELGD IINWASNHHEKLDGSGYPLHLEKDHLTLADRIISIADIFTALTEDRPYRKGMAWQEALQI MEADVINGALDSDVFLVLRHHAETLHAIILQTLEHPRSEHRP >gi|289774647|gb|GG745514.1| GENE 84 83289 - 85073 2186 594 aa, chain + ## HITS:1 COG:AGl3494_1 KEGG:ns NR:ns ## COG: AGl3494_1 COG2770 # Protein_GI_number: 15891865 # Func_class: T Signal transduction mechanisms # Function: FOG: HAMP domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 286 1 286 286 166 34.0 1e-40 MRIATITNWAYGITVGLTLASGSAMLMASSADRVERQAVQQRQVFDTLSDEVENDAWALS DLARLYVVKPSPETLTQYQQLQQTDKSIEQRLAGLKDNGASREELALLQDGLRIADELQD EQQAALTHVARGDAPAAIAVLYGKAYETELERMQTQIDRFRQMLEHRAAIAIDQATERSR IWRTLSEIMVGLTALMFLFVLGFILKRRVLYPVVRLSDVVQRLASQDYAVETPHFTQVDE IGDMAQAIRIFRENGLARQQLELQRDADWAIRELLARMTQRLQGCETIEDVIKVAELFAP NIAPTIPGKLYILDTDPWQMRCVAQWLSPAGETTSFAPDDCWAIRRGLSHPPVQGEPDIT CYHLPEAHADQSLCVPLIAQGEAIGLLSFQNVTASDAPSRAYLELMAEALGLALANQRLR SALLEKALFDSLTGLRNRHHLDEALHSQMALAVHTHTPLSCLMIDIDHFKAINDRYGHEA GDLVIKSVATIVQRAVRDIGMAFRYGGEEFLVLLPGIDEAGAHQCASEIYTQVHNMTLRD GLTEIGQVDVSIGIASYPQHTQSDSLLRAADAALYRAKELGRSRIVSFGRLKTR >gi|289774647|gb|GG745514.1| GENE 85 85080 - 85970 182 296 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 245 1 239 305 74 26 2e-12 MSLRALRHFVVVAEELHMHRAAERLHIAQPALSQQIKQLEQRLGVVLFSRANRRLTLTAA GEAFLQKTRLALEMADQAVLDAQRTARGEQGRLHLGYVSSAMYDSKLPGLLRELRADWPG IELSLVQGDVQMLYEALLDLRLDIAIIRAPLASPPDALVVRPFVREKLCLALYQQHPLAG VGALNLASLRTDNWISLDDPQGTGLEQVFIDACRVAGFTPQVVQRINDVTSMISLVSAGV GVALVPVSARALRLDNVVYIDLQDRLAESELSMVYHRHFRSAVVRKVISLLNAAEQ >gi|289774647|gb|GG745514.1| GENE 86 86091 - 87593 1707 500 aa, chain + ## HITS:1 COG:MA0246 KEGG:ns NR:ns ## COG: MA0246 COG0043 # Protein_GI_number: 20089144 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Methanosarcina acetivorans str.C2A # 9 476 4 417 422 158 28.0 2e-38 MTAPIQDLRDAIALLQQHDNQYLETDHPVDPNAELAGVYRHIGAGGTVKRPTRIGPAMMF NNIKGYPHSRILVGMHASRQRAALLLGCEASQLALEVGKAVKKPVAPVVVPASSAPCQEQ VFLADDPDFDLRTLLPAPTNTPIDAGPFFCLGLALASDPDDASLTDVTIHRLCVQGRDEL SMFLAAGRHIEVFRQKAEAAGKPLPITINMGLDPAIYIGACFEAPTTPFGYNELGVAGAL RQRPVELVQGVSVPEKAIARAEIVIEGELLPGVRVREDQHTNSGHAMPEFPGYCGGANPS LPVIKVKAVTMRNNAILQTLVGPGEEHTTLAGLPTEASIWNAVEAAIPGFLQNVYAHTAG GGKFLGILQVKKRQPADEGRQGQAALVALATYSELKNIILVDEDVDIFDSDDILWAMTTR MQGDVSITTIPGIRGHQLDPSQTPAYSPSIRGEGISCKTIFDCTVPWALKSHFERAPFAD VDPRPFAPEYFARQEKNHGQ >gi|289774647|gb|GG745514.1| GENE 87 87669 - 88067 431 132 aa, chain - ## HITS:1 COG:STM0307 KEGG:ns NR:ns ## COG: STM0307 COG3678 # Protein_GI_number: 16763690 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 131 5 134 135 133 56.0 7e-32 MRNTLLAIALTTGFTAASQASTSADIPSVSQDPVVQHLKLSEEQVAKIQALRQGFENNVS QIKISGYQDGALADVIHSGKWDDAKVKQQLAAFGQLDQQVRYYRVKYYFDVSQVLTPEQR EQVKKDLSAAIN >gi|289774647|gb|GG745514.1| GENE 88 88209 - 88895 669 228 aa, chain - ## HITS:1 COG:YPO2779 KEGG:ns NR:ns ## COG: YPO2779 COG2200 # Protein_GI_number: 16122983 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Yersinia pestis # 5 216 6 215 232 81 30.0 1e-15 MVEENVKNTSYRFVLEPAISDDGSYHSWELLTKDIIAPAQNTPSASTFSFSTLTERDKLA LFIRQIELLSVFDFARVDNKPISLNIDDLLSHFILTDRYLCDFLRSCKHIALEINENFHE FIAGRELTALSTLAALCPVWLDDFGRGRTSFPLLERFRFDCVKVDKDYFWDKENDPAFPG LLQSIHTLTSHVIVEGIETEKQKQLISAAGDIIGQGRYWKDEYIFLCC >gi|289774647|gb|GG745514.1| GENE 89 89530 - 90162 695 210 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3199 NR:ns ## KEGG: Kvar_3199 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 210 1 210 210 394 99.0 1e-108 MAGRIDYDIEKYQFTEAGESPRLRAQWREVYLECRQQQAGAEERLRIALLNVDYVTSFEL PFRLLLVRAPQLIADVRDQLQLNRKAAVFNGKRYGCVYSLKQDLQPIPESFHYHLSNRIR RVDPQGPTAAPYQQIAREIKPARERLRHALLAGLPVTALDALFWFGSQRVAADIAQLRRS GMGIVTEEVEASDNLFNTTRRVPVYRLTSK >gi|289774647|gb|GG745514.1| GENE 90 90254 - 90358 110 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQLLDLFAGLLWLSSVIFLLYLLDVVITRYLYRK >gi|289774647|gb|GG745514.1| GENE 91 90736 - 90933 239 65 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3201 NR:ns ## KEGG: Kvar_3201 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 65 1 65 65 122 100.0 7e-27 MPSEKARSLDHFYELLATGQHPKIELDFDVAADDFFKIATEFGDIGARITRVNERFIIKI KPPKA >gi|289774647|gb|GG745514.1| GENE 92 90992 - 91786 864 264 aa, chain - ## HITS:1 COG:mll3235 KEGG:ns NR:ns ## COG: mll3235 COG2207 # Protein_GI_number: 13472820 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 10 257 12 256 268 268 53.0 9e-72 MPSPFANTLYDPDAASCPAVACHLDFVEYEAEVPVHTHRKGQLIIVLYGAVSCRAENNLW IVPPRCAVWIPGGIPHSVSATWNARLNYLFIEPGTAALPGSCCTLALSPLIHELVERLTR EGADYVADSHAGRLTRVTLDELATMPAQRLNLPVSAHPKIRAMADRLVSHPDDRSTLSVW AKRLALSERSLARVMLRETGLTFGRWRQQLHLIIALQELASGVSVQNVAAKLGYESVNAF ITMFKKTMGTTPAHYFAERQTAAR >gi|289774647|gb|GG745514.1| GENE 93 91864 - 93915 1636 683 aa, chain + ## HITS:1 COG:AGpA807 KEGG:ns NR:ns ## COG: AGpA807 COG1289 # Protein_GI_number: 16119771 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 38 605 12 575 671 252 32.0 1e-66 MNINRFRQASWLRAAGAVARPFMPQSTSAVLRSDAQAILFSAKSFAAAMLAYYLALSIGL QRPSWAIITVYIVSQTSVGASLSRSVYRLLGTLVGAAATVFIVPTFVNQPILCSAMLALW IAGCLCLSLLERTPRGYAFLLAGYTASLIGFPAVSVPGTIFDLAVTRVEEIAIGILCAGL IHRFVLPVRIAGRFNSTLAQTLATARQRIADTLAGKPVAAETLRLALSLQFLQGINHHLP WDDGLSVPHRQARKAIHDRLARLLIVNGELYDRLQRCGQPPDDLQTLLTEAEVWLRGPEA DRTALSADELLSRCEQLINRCAPAQTLNEALRVSLVRHLAEAIRLLQQSERLAKAIYHRR SPTLPPDARAAKGYVFHRDPLSALRTAFGAFVIILSGCLIWIGSAWPDGGTAVSILGVCC SLFASFDAPAAQLVKYLIGCVWGVLFSLLYSFALLPQVSEFALLAAMLAPVYLLAGSLQA RPPTTFMAMGITLTLPILCELGPSYQGDFATAMNTSIALFVAIGYAAFGMRLLQTVQADA AVHRLLTLCRRDIRRAARGRLAHNAHRWTNLMIDRTALLLPRLPQSGPTAGQLLDKMLHD IRTGLAVIHLRRSYQPVDREAATAVQTLLDALRQEPDIEALAQPVDALLAHGLPADAASH ERAEALISLYCALHRPEESQNHA >gi|289774647|gb|GG745514.1| GENE 94 93908 - 94120 221 70 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3204 NR:ns ## KEGG: Kvar_3204 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 70 1 70 70 74 98.0 2e-12 MRDLAMGGVFFPGLLVVGLVALLATLLLQPLIFSVRGLGRLPCRPLWGLSLYIVLFFLLL QEVNTLGFAV >gi|289774647|gb|GG745514.1| GENE 95 94117 - 95037 1007 306 aa, chain + ## HITS:1 COG:PA1231 KEGG:ns NR:ns ## COG: PA1231 COG1566 # Protein_GI_number: 15596428 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Pseudomonas aeruginosa # 8 292 6 290 302 242 49.0 5e-64 MTVYLTLLGRYALTLGAVAAAALLAFILWKQEAQTPWTRDGRVRADVVQIAPDVSGPVAS VAVKDNQWVNRGDVLYSIDPRWLKLAVSSAQAEVEARRQEMAMRQDAARRRAQIQGVISS EDLKQTTSAASVAAANYQGALAALALAQLNLAHATVRTPVAGYVTHLRLRPGDYATAGVT KVAIIDGQRFWVVGYFEETRLRHIHVGDTAHITLMGYDPVITGHVESIGHGIGDTNDETG ALGLPEVEPTFSWVRLAQRVPVRIHIDTLPEGVERVAGLSATISVIPARLARRAGKSSPA GANQAQ >gi|289774647|gb|GG745514.1| GENE 96 95031 - 96041 1634 336 aa, chain - ## HITS:1 COG:STM0361 KEGG:ns NR:ns ## COG: STM0361 COG1294 # Protein_GI_number: 16763741 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 437 74.0 1e-122 MSIDISVIWFVIIVFATLMYIVMDGFDLGIGMLFSVVHDGEERDVMVNSVAPVWDGNETW LVLGGAGLFGAFPLAYAVITDALVIPLTAMLIGLIFRGVAFEFRFKAVPSHRTFWDYAFA GGSLLATFSQGIVVGAFINGFAVADRRFAGSTLDWLTPFNLFCGLGLVVAYLLLGTTWLI MKSEGALQQRMRELTRKVLLALMVVIAVVSVWTPLGWRYVAERWFTLPNFFWFLPVPILV LALSLWIWRLSARPASHARPFILTLGLIFLGFSGLGISVWPNIIPPNISLWDAAAPPSSQ VFMLPGALLIIPVILMYTAWSYYVFRGKVSGSEGYH >gi|289774647|gb|GG745514.1| GENE 97 96038 - 97444 1645 468 aa, chain - ## HITS:1 COG:STM0360 KEGG:ns NR:ns ## COG: STM0360 COG1271 # Protein_GI_number: 16763740 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 3 465 2 464 467 739 80.0 0 MFEFDAFHLARLQFAFTVSFHILFPAITIGLASYLVVLEGMWLRTRDNVWRSLYNFWLKI FAVNFGMGVVSGLVMSYQFGTNWSGFSQFAGSITGPLLLYEVLTAFFLEAGFLGVMLFGW NKVPPALHFFTTCMVALGTLVSTFWILASNSWMQTPQGFTIENGHLIPQDWLAIIFNPSF PYRLFHMAIAAFLSSAMFVGASAAWHLLHGNDSPAIRKMLSMAMWMALLVAPIQAVVGDM HGLNTLEHQPAKIAAIEGHWENRPGEATPLLLFGLPDMEQERTRYGLEIPALGSLILTHS LHKQVPALKDFPKEDRPYSPAVFWSFRIMVGMGVLMIALGICSAWLRYRRRLYHSRPFQW FALCMGPAGLIALVAGWVTTEMGRQPWVIYGLLRTRDAVSLHSTLQMAISLLVFIVVYCA VFGVGYYYIFRLIKKGPQPVTELTSQTAGTPARPLSAAEPVRDEENAS >gi|289774647|gb|GG745514.1| GENE 98 97500 - 98387 1099 295 aa, chain - ## HITS:1 COG:STM1731 KEGG:ns NR:ns ## COG: STM1731 COG3546 # Protein_GI_number: 16765075 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Salmonella typhimurium LT2 # 1 287 1 287 292 473 82.0 1e-133 MFRHVKQLQYTVRVAEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDPGRKDMLMD IATEELSHLEIIGTLVGMLNKGTKGALAEGTESEAELYRSLTANGNDSHITSLLYGGGPP LTNSAGVPWTAAYIDTIGEPTADLRSNVAAEARAKIVYERLINVTDDPGVKDALAFLMTR EAAHQLSFEKALQSIRNNYPPGKLPPISEYANTYYNMSEGGEVRGSWNSDKHFDYVKDPQ PAVDGGDGSATVGLTPEQEALCKAMLKRTQSDPQGDPLTGAELGAGKQNTSSSAK >gi|289774647|gb|GG745514.1| GENE 99 98404 - 98910 622 168 aa, chain - ## HITS:1 COG:STM1730 KEGG:ns NR:ns ## COG: STM1730 COG3685 # Protein_GI_number: 16765074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 168 1 168 168 281 88.0 4e-76 MNHVEHYHDWLRDAHAMEKQAESMLESMAGRIDNYPDLRARIEQHINETKRQITVLEEIL DRNDISRSVIKDSMSKMAALGQSIGGMFPSDEIVKGSISGYVFEQFEIACYTSLLAAAEK AGDTASIPAIEAILAEEREMADWLIKHIPQTTEQFLLRSDADGVEAKK >gi|289774647|gb|GG745514.1| GENE 100 98937 - 99431 565 164 aa, chain - ## HITS:1 COG:yciF KEGG:ns NR:ns ## COG: yciF COG3685 # Protein_GI_number: 16129219 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 163 1 163 166 211 87.0 6e-55 MNMKSIEDVFIHLLSDTYSAEKQLTRGLAKLARAASSEKLSAAFNAHLEETQGQIERIDQ IIEQESGLKIKRMKCVAMEGLIEEANEVVESTEKNEVRDAALIAAAQKVEHYEIASYGTL VTLAEQLGYKKAVKLLAETLEEEKQTDVKLTDLAVGNINKKAEK >gi|289774647|gb|GG745514.1| GENE 101 99521 - 99706 129 61 aa, chain - ## HITS:1 COG:STM1513 KEGG:ns NR:ns ## COG: STM1513 COG3729 # Protein_GI_number: 16764858 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 60 1 60 60 67 95.0 8e-12 MAEHRGGSGNFAEDREKASEAGRKGGQHSGGNFKNDPQRASEAGKKGGQNSHGGGRKSDN S >gi|289774647|gb|GG745514.1| GENE 102 100316 - 101509 1244 397 aa, chain + ## HITS:1 COG:STM0615 KEGG:ns NR:ns ## COG: STM0615 COG1063 # Protein_GI_number: 16763992 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 395 1 395 412 665 79.0 0 MKALTYHGPHHVSVDTMPDPALEAPDDIILRVTATAICGSDLHLYRGKIPGTHHGDIFGH EFMGEVVEAGSEVTAVRKGDRVVIPFVIACGDCFFCRLQQYAACESTNSGQGATLNRKGI SPPAALFGYSDLYGGIPGGQAEYVRVPKANTGPFKVPDTLPDEKVLFLSDILPTAWQAVK NAEVKPGSSVAIFGAGPVGLLCASCARLNGAEQIFIIDHNDYRLDFAQQRYGAIPINFDT HDDPAQWIIDNTPGHRGVDAVIDAVGFEAKGSLTETVLSNLKIEGSSGKALRQCIAAVRR GGIVSVPGVYAGFIHGFMFGDAFDKGLTFRMGQTHVHAWLPDLLALIEQGLLTPEEIVTH HMPLEEAARGYQIFEKREEACRKVILVPGMQPGKATL >gi|289774647|gb|GG745514.1| GENE 103 101898 - 102443 212 181 aa, chain - ## HITS:1 COG:SMa1724 KEGG:ns NR:ns ## COG: SMa1724 COG1335 # Protein_GI_number: 16263400 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Sinorhizobium meliloti # 4 147 81 225 260 80 32.0 2e-15 MISSEHALLIIDMQQGLFHSPVSPYQADALLANVCLLIEKARQAEVPVFFARHTGPDDSP FSAQSPLTQLLPEMGVSGERDIVFIKRYPSCFQHTDLAHRLAQAGVKQLVIAGMKTEFCV DTTCRAASALGWRTVLISDAHSTMDNERLSAPDIIGHHNITLAGPFVSLSTAAEWHFSAE K >gi|289774647|gb|GG745514.1| GENE 104 102763 - 103236 272 157 aa, chain + ## HITS:1 COG:CC0941 KEGG:ns NR:ns ## COG: CC0941 COG1764 # Protein_GI_number: 16125193 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Caulobacter vibrioides # 2 151 4 153 156 205 66.0 2e-53 MQHAYTSHITWTGNQGTGTSGYKAYARTWDIAVKGKEPIHCSNDPLLGGDPGKMNPEDLL LSSLSACHMLWYLHLASDAGITVMEYQDSPVATGEVLKGGAGRFISATLRPKITVLPGTD LDAATAIHQQIHHVCFIARSVNFPVSYQPEFIIFNAE >gi|289774647|gb|GG745514.1| GENE 105 103374 - 103697 219 107 aa, chain + ## HITS:1 COG:BMEI0152 KEGG:ns NR:ns ## COG: BMEI0152 COG2329 # Protein_GI_number: 17986436 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Brucella melitensis # 1 98 1 98 120 107 58.0 6e-24 MIAVLFEADALPEAQERYLQLAAGLTPLLSDTPGFIAIERFQSLSTPGKILSLSWWEDEA SVANWQQNERHLAAQREGKASIFSYYRIRVARVFRDYASDRGAQSDV >gi|289774647|gb|GG745514.1| GENE 106 103690 - 104082 127 130 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3219 NR:ns ## KEGG: Kvar_3219 # Name: not_defined # Def: amino acid-binding ACT domain protein # Organism: K.variicola # Pathway: not_defined # 1 130 1 130 130 256 99.0 2e-67 MYDIHVILSNTPGSLGAMGLALGNNGVGLEGGGVFTTPDAGHAHFLVEDGEKARRVLTEA GFAVSSVCRPLIRKLPQERPGELGDIADTLARNGINILVQYSDHRNRLILITDDDTRAAE VTKKWAILSE >gi|289774647|gb|GG745514.1| GENE 107 104079 - 104792 359 237 aa, chain + ## HITS:1 COG:BMEI0150 KEGG:ns NR:ns ## COG: BMEI0150 COG0640 # Protein_GI_number: 17986434 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Brucella melitensis # 23 232 32 239 243 154 43.0 1e-37 MNLLKTQQDSEPEEALETAMAMVASALSDPSRVSILCALMDGRAWTATELSTVAEVSAST TSGHLARLLSNGLVVCLAQGRHRYYRLAGAHIAALLENLMGVSMQAHKTLLPSTPVNLRY ARTCYDHLAGELAVNIYEYMLREKWLAADGLALTSAGKAQLERLGAVLNTRPRRKPCCPC LDWSERRFHLGGDAGSALMALFEQKGWITRTPGYREVQVTDSGRAALSRLFNLKVSG >gi|289774647|gb|GG745514.1| GENE 108 104909 - 105349 340 146 aa, chain - ## HITS:1 COG:PA0483 KEGG:ns NR:ns ## COG: PA0483 COG0454 # Protein_GI_number: 15595680 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 1 142 1 143 147 110 41.0 6e-25 MKIYQAQPHDVDTLLPLYLGYRRFYEVEENASQARDFILKRLQLNESVIFYAEVDGKAVG FTQLYPLFCSLEMKRIWLLYDLFVDESARKLGVAQTLISRAEQLAKESDSAFIMLSTATD NTRAQALYERNGFVRDTQFYVYNKLL >gi|289774647|gb|GG745514.1| GENE 109 105973 - 106203 60 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKFYPQQETGCRHGNTSARREASFDPSDNSLYPLRDPELQASQMTLTLAQNQCSTKSEI FVFPETSDEFSRSHVI >gi|289774647|gb|GG745514.1| GENE 110 106144 - 106896 299 250 aa, chain - ## HITS:1 COG:YPCD1.94 KEGG:ns NR:ns ## COG: YPCD1.94 COG2801 # Protein_GI_number: 16082777 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 250 20 269 269 380 76.0 1e-105 MQSRTVYHWQSRRDDRAITLRIREIAETRIRYGCPRIHIQLRREGWPVNHKKTHRIYCLE GLNLRRKRPRRHVSAAHRQQRPVLTGVDQCWSMDFVSDNLFNGRRFRALTVVDNFSRECV AIHAGKSLKGEDVVGVMERLRVLGKRLPVRIQTDNGSEFISKSLDKWAYEHGVTMDFSRP GKPTDNPFIESFNGSLRDECLNIHWFLSLEDAQDKLDNWRREYNHERTHSSLNDMTPAEF IRSLRKDEDL >gi|289774647|gb|GG745514.1| GENE 111 106977 - 107243 365 88 aa, chain - ## HITS:1 COG:YPCD1.93 KEGG:ns NR:ns ## COG: YPCD1.93 COG2801 # Protein_GI_number: 16082776 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 88 1 88 88 130 96.0 4e-31 MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLE EENQRLKRLVADLSLDKEMLQEVIKKKF >gi|289774647|gb|GG745514.1| GENE 112 107466 - 108566 -345 366 aa, chain - ## HITS:1 COG:no KEGG:c0290 NR:ns ## KEGG: c0290 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 366 2 367 367 552 72.0 1e-156 MFDDDDSDQDVPKQRELSQDVLALINNGLEFLDKARMELESSKLKFSIVSFWTAVEILLK VPLAHEHWSLVCSPKKPIKKQAYLAGDFQSVTYEETRERLKDVLENPLDKETNDAFDKVR KHRNRVVHFFHPTFSAAEEHTILKEQADAWFALNRLLRDDWKIIFRANHNFKLALNETRL IRGNEFYAKIRLKQVKPELEQIAKQDIQIGNCTECHQDATVTETIIISNENRKLEVTRCK VCTSSVRKITLACPSCEVIHVLPEGDEEFECKDCGYSSERYELFDEELVYSLDQQEFSDF PAGCTNCMKPDSVCIFGEGFLCVECLNYYKKMSQCKYCEHLSNQVPLNSRAYGCEFCDGP QNYIGD >gi|289774647|gb|GG745514.1| GENE 113 109159 - 109836 118 225 aa, chain + ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 222 1 222 222 394 86.0 1e-110 MCGRFAQSQTREEYLAYLAEEAERDIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVH WGYAPGWWDKPPLINARVETAANSRMFKPLWQHGRAICFADGWFEWKREGDKKQPYFIHR ADGLPIFMAAIGSVPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLTPEVAREWMHKDI GGKEAEEIAVDGAVSADHFTWHPVSRAVGNVKNQGPELIEAIKSL >gi|289774647|gb|GG745514.1| GENE 114 110634 - 111188 -153 184 aa, chain + ## HITS:1 COG:PM1783 KEGG:ns NR:ns ## COG: PM1783 COG4823 # Protein_GI_number: 15603648 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 2 121 187 302 316 60 32.0 2e-09 MLKDEYRDVICNRVGIDKRDVLDNWLININGLRNRCAHHSRFCNRPNPRSFKLLRNGYFN LLNISQSESEKLFGAIAVIWFLIKKIGPSSNWLDRIADLIDTKPNVPGFYFSSMGFDRTL TSFPRTRFNHQFKSNQVTESSKPVTIEQLIDELEKLTSIESPDVDASLTDRLLQLAEHYE GSSL >gi|289774647|gb|GG745514.1| GENE 115 112083 - 112541 -404 152 aa, chain + ## HITS:1 COG:no KEGG:VIBHAR_01945 NR:ns ## KEGG: VIBHAR_01945 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: not_defined # 2 148 239 383 386 177 57.0 1e-43 MYGKFIDQRYLNYLSINTEKLGSMHWRQFEALTAEYFERKGYKVEIGSGRNDGGIDVRVW HPNANASAPPVQLIQCKRTKSKINKVLVKSLWADVIDENAKGGIIVTTSSFSPGAQEICK ARKYPIREVNREKVIQWLNELRRVGRGVFMGD >gi|289774647|gb|GG745514.1| GENE 116 112627 - 113355 -40 242 aa, chain - ## HITS:1 COG:VCA0309 KEGG:ns NR:ns ## COG: VCA0309 COG3183 # Protein_GI_number: 15601074 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Vibrio cholerae # 4 223 2 216 234 182 44.0 4e-46 MSKSRKQFILSKGAVCNNWNWSWSFTNHEEKMVIFGAWDFNTDNDKSLIMHKNWEYKNNR RQPGYSQAIEHLKLLDQGYSLYIFHQENVGDDEDEPKIGKISDNILKAHIKHDGEAWYAY PNAFDYLPDEIGEEEEYFEGTRNLVAVNSYERNKDARETCIKIHGYKCKACDFDFEKKYG DHGKGFIHVHHIIPLNMIGKRYKVNPEHDLIPLCPNCHAMVHRFKNNELDLEKLKELISS CK >gi|289774647|gb|GG745514.1| GENE 117 113582 - 114769 438 395 aa, chain - ## HITS:1 COG:ECs1679 KEGG:ns NR:ns ## COG: ECs1679 COG0389 # Protein_GI_number: 15830933 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 395 27 422 422 708 86.0 0 MVVLSNNDGCVIARSQEAKPFVKMGEPYFKQKDMFRRHGIIAFSSNYELYADMFNRVMTT LEELSPRCEIYSIDEAFCDLTGVRNCRDLTDFGREIRETVLRRTHLTVGVGIAQTKTLAK LANHAAKQWQRQTGGVVDLSNLERQRKLMALLPVDEVWGVGRRISKKLEAMGIKTVLQLA DTDIRFIRKHFNVVLERTVRELRGEPCLGLEEFAPVKQEIVCSRSFGGRITEYHEMRQAI CSYASRAAEKLRDEHQYCRFISAFVKTSPFALNEPYYGNSASVKLLTPTQDSRDIITAAT KCLDAIWRDGHRYQKAGVMLGDFYSQGVAQLNLFDDNAPRRGSEKLMEVLDHLNAKGGRG TLYFAGQGIQTAWQMKREMLSPRYTTRFCDLLKVR >gi|289774647|gb|GG745514.1| GENE 118 115357 - 115521 268 54 aa, chain - ## HITS:1 COG:STM1238 KEGG:ns NR:ns ## COG: STM1238 COG0538 # Protein_GI_number: 16764593 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 54 363 416 416 114 100.0 4e-26 MLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIIANM >gi|289774647|gb|GG745514.1| GENE 119 116008 - 116214 83 68 aa, chain - ## HITS:1 COG:no KEGG:c3205 NR:ns ## KEGG: c3205 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 6 68 67 129 129 62 44.0 5e-09 MAWKDGAEIYPKLTLKALGFALQALKDQRIISDYRLEVTINELEANVAVRTAEKLLQKCE DMAKSKAS >gi|289774647|gb|GG745514.1| GENE 120 116381 - 117148 190 255 aa, chain - ## HITS:1 COG:no KEGG:c3206 NR:ns ## KEGG: c3206 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 253 1 256 271 154 36.0 3e-36 MPKAAPKSNKIASELIDVLKAKVKIDEFTFRKYLREIDSLNDRFSDDYLKALAYAAFGLK DDAVHFFEASLAWGVDTYAMNYAIYLSEFGTHKELREVVNRLITKYGSKTMLTFGWETNL FTGNIETALHYADRFIAIADEKDAEAMKNDAHGIAIESEKFRQKAGLTEDEYKDIAQKMI DVADNYGIRASSISFYFVAEEKTAAYILTLKTDDIDVIADMNIDIAFSLAENENLAGKRF SVWYRGTQEEENACN >gi|289774647|gb|GG745514.1| GENE 121 117709 - 118380 223 223 aa, chain + ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 222 1 222 222 391 86.0 1e-109 MCGRFAQSQTREEYLAYLAEEAERDIDYDPEPIGRYNVAPRTKVLLLSERDEQLHLDPVH WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKREGDKKQPYFIHR KDGKPIFMAAIGSVPFERGDESEGFLIVTAAADQGLVDIHDRRPLVLTPEAAREWMRQDI GGKEAEEIAADGAVSADKFIWHCVTRAVGNAKNQGPELIEPLN >gi|289774647|gb|GG745514.1| GENE 122 118495 - 119394 -89 299 aa, chain + ## HITS:1 COG:no KEGG:Arnit_2649 NR:ns ## KEGG: Arnit_2649 # Name: not_defined # Def: FRG domain-containing protein # Organism: A.nitrofigilis # Pathway: not_defined # 5 290 8 277 296 111 29.0 4e-23 MITTEQHFNEAKDLLNFLCSWNNNLSGYVFRGHSDESFQLLPSVLRDNSRYLADNQHPRT EVPGQLRNSDREWHQIQHERIILRDFYKLADNHGLKVPNVEKLRNSLIGRFDYNFTQQGR IEWLSQDILEVAALAQHYGIPTRLLDWSYDPFVSSYFAASGVTDDSGNLAVWCFNAEYLS TWLNTNSRLKLKLIIPPYSENSNLSAQRGLFTHMPVEFDFSNNDNASIPVDRTPLDIKLD NILPPEPYTQNREKIFLKLTLPCSKAKDLLKFLLQQGYGEARIYPGYKGIANQVMRKYK >gi|289774647|gb|GG745514.1| GENE 123 119470 - 120657 281 395 aa, chain - ## HITS:1 COG:ECs1679 KEGG:ns NR:ns ## COG: ECs1679 COG0389 # Protein_GI_number: 15830933 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 395 27 422 422 705 85.0 0 MVVLSNNDGCVIARSQEAKPFVKMGEPYFKQKDMFRRHGIIAFSSNYELYADMSNRVMTT LEELSPRCEIYSIDEAFCDLTGVRNCRDLTDFGREIRETVLRRTHLTVGVGIAQTKTLAK LANHAAKQWQRQTGGVVDLSNLERQRKLMALLPVDEVWGVGRRISKKLEAMGIKTVLQLA DTDIRFIRKHFNVVLERTVRELRGEPCLGLEEFAPVKQEIVCSRSFGGRITEYHEMRQAI CSYASRAAEKLRGEHQYCRFISAFVKTSPFAQNEPYYGNSASVKLLTPTQDSRDIITAAT KCLDAIWRDGHRYQKAGVMLGDFYSQGVAQLNLFDDNAPRKNSEKLMEVLDHLNAKDGRG TLYFAGQGIQTAWQMKRDMLSPRYTTRYCDLLIVR >gi|289774647|gb|GG745514.1| GENE 124 120737 - 121219 -63 160 aa, chain - ## HITS:1 COG:STM1998 KEGG:ns NR:ns ## COG: STM1998 COG1974 # Protein_GI_number: 16765334 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 22 158 1 137 139 208 75.0 4e-54 MICRPVKTTVYKNSINLSESIMQFYTPVELREIMLIPLYSDLVQCGFPSPAQDYVEQRID LNELLVNHPSATYFVKAAGDSMKDAGIGEGDLLVVDSSRTAVHGDIVIAAVDGEFTVKKL QLHPRVQLNPMNPAYSPIVVGSEDTLDVFGVVTYIIKSAG >gi|289774647|gb|GG745514.1| GENE 125 121848 - 121979 68 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLAYTQVPGFIKKHRHVLIFNNNLIQNLQSKFYDLLTRELSL >gi|289774647|gb|GG745514.1| GENE 126 121921 - 122538 107 205 aa, chain - ## HITS:1 COG:no KEGG:LPST_C1712 NR:ns ## KEGG: LPST_C1712 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum_plantarum # Pathway: not_defined # 6 205 12 227 396 88 25.0 2e-16 MSVSKDFLLSVYERCNEHLKEQSTKRDQAIAFYLVVISFYFGSYSAISKLLVSPYSPVFF NVVICLISGMTIRTLSGLRSWHMQYANSALALNKVISKNIFELDALNLEIKSFFDKKEKE YHEMSLAKMFSGIENRVILGMTLISGFPVVMLVKEVMSLLKVSNKEIIVLVECAFYLAYV VYYFYNTIMIIRESANHKTWIVNFE >gi|289774647|gb|GG745514.1| GENE 127 122697 - 123245 102 182 aa, chain - ## HITS:1 COG:STM2772 KEGG:ns NR:ns ## COG: STM2772 COG1961 # Protein_GI_number: 16766084 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Salmonella typhimurium LT2 # 3 181 4 182 190 229 65.0 3e-60 MLIGYARVSTGDQNLDLQKTALFRAECEQIFEDTASGKNARRPGLRRALRRLKPGDVLVV WKLDRLGRSVRDLITLVSELQARGVNFRSLTDSIDTSTPAGRFFFHVMSALAEMERELIV ERTRAGLAAAREQGRVGGRPRVMTTEVVGRCRRMLDTGATRQQVADVIGVGVKTIYKYFP AQ >gi|289774647|gb|GG745514.1| GENE 128 123337 - 125424 1078 695 aa, chain + ## HITS:1 COG:no KEGG:KPK_3132 NR:ns ## KEGG: KPK_3132 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 266 695 1 430 430 858 96.0 0 MAFNPELGSTSPAVLLDNAERLDKLVNGPAATVPDRAGQPLDTWRQIVTMMLAAVTDAQN SITAIGLPFNTLSDAQAAVAAGKIPDGSVTWVRTTDSAALADEYKNINGVLTATGRRMPS QDAVDALSRQLLDSIVTGDVPGFWLALKDSAGWISWGVDDQGGFGSRAAYLGTDNILAGN IKILFTDDVGLRFQDPEGFYIDVLDNFGRYLLGDSGGGSSSVDEVSILDLKNKAYAAEVS RRVLTRLKFPTEAYNHFLMECQSLGMGYMSWPVVSKTPKYDSLMLGQSVRPASTTNNAFV PLGVNAWQPLRAVVQSVSGSAILSDAEQLALARSAVNEGESPIVGAVNGFRRHFLEAHCL SADAGRLFVASTVGVSGQSIASLMDDTKYFNRVVECVTKAKALADSEGKTYSVTGVDFVQ GQRDYDDGTPKATYKSQLGQLYNKINNTIRGITGQKDNPAWFISQTGYTYSPNPAMQPVN AVELWVGMAQWEFCQETPNCFLIGPDYQLPDKGGHLMTNGSRWLGCYFAKAKDRVLNQRR PFQPLAPIEFTCVGRDLLGSYYVDRPPIKLTSPFRAGTRTPITNAGFRAWHMIDADSSGI GTELNITSVAVAADTVIRLTCDTEPQGKVRVAYATRPQYGQGMVTDSDKYVPDEVYEYDP QFTQWPEENIPELIGKPYPMENWSIAFSMTFTKDE >gi|289774647|gb|GG745514.1| GENE 129 125425 - 126174 43 249 aa, chain + ## HITS:1 COG:no KEGG:KPK_3131 NR:ns ## KEGG: KPK_3131 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 248 1 248 249 401 96.0 1e-110 MSLAIQKDVDFSAVATGYLPPVTAGVEYFNFFNSEDSLTRNLIPNKPTPAKNGSPLFNTN GQSFLLTNLLNFINTGIKLIDEMTIITVAEPTGADGNFPTWSTTGSLITNGGSFTSQSFM RQSATTRNPTLSLSYSTDGFITRQNLSYGVSSGVDNIRLRAIASAFSQTAKTSSLYDLTN NKNAQAPLSANGVYGKAGNILLGSHYNAAESSQGNLYAAAIYSRMLSTAEINQVYAALKA YYSKRSITA >gi|289774647|gb|GG745514.1| GENE 130 126495 - 126785 80 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290512894|ref|ZP_06552259.1| ## NR: gi|290512894|ref|ZP_06552259.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 96 103 198 198 174 100.0 1e-42 MSIIVNKWYVACGVISPNRNHKLTLSDGTAIAASPAGYLANVAGSPLMLGASAAGSSMLK GDMGFFGAWGNEFTAGDIATAIALGINIMTGRGQTV >gi|289774647|gb|GG745514.1| GENE 131 128316 - 129770 618 484 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1820 NR:ns ## KEGG: Kvar_1820 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 68 63 130 702 110 77.0 2e-22 DEVRQNLIPLSKQYQTLAAAQADIVNIPEGSTTYYRSPDDSALAIEVMNVGGTLTATGRK MPSSQAVDSVRGLIDSQGENLFSVVFKNGLSPFGYKDGRLYADEFQKLYSSDAGLEFGGS IIDNNPPDGWRFVIYYRNGLVMCGQRNDGTMIGFGEGGSGGGSIEPGDTAADYDSIRNYT GTATVRDVVGQRTGGRFVVNPDDTTSGEIPGGILVDVLGRRWYRQAEFVSYDMFMAPRVP GATLLAVQVALAMGNRSSAIAYLSGVEAADAAIQNAHRYANLLNIPVRQNDGAFLVLVDH EAEVRTKTSLGGSIIFTSADSGVNEIRWGPLRLLDPSAPEPKRMFNIKGKERIELTPAEL ATFNTSYSQYLKKGSNYLPYPKLYPYYGGMFYALSNEVEIYRNGNRDNPRDRVLYREFSR IGRNGALTERIVKDIPTGSVGYAAIIPKEDDFLEFECPHFIELGDSRRFLNIEVSRPMVR IKNR Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:10:12 2011 Seq name: gi|289774508|gb|GG745515.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.8, whole genome shotgun sequence Length of sequence - 126386 bp Number of predicted genes - 140, with homology - 135 Number of transcription units - 74, operones - 29 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.500 - CDS 2 - 644 805 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 2 1 Op 2 3/0.444 - CDS 647 - 1207 672 ## COG2128 Uncharacterized conserved protein 3 1 Op 3 2/0.500 - CDS 1204 - 1914 938 ## COG0398 Uncharacterized conserved protein 4 1 Op 4 1/0.667 - CDS 1901 - 2557 813 ## COG0398 Uncharacterized conserved protein - Prom 2660 - 2719 1.6 - Term 2719 - 2758 8.3 5 2 Tu 1 . - CDS 2771 - 3577 1030 ## COG0708 Exonuclease III + Prom 3929 - 3988 6.4 6 3 Op 1 7/0.167 + CDS 4016 - 5236 1590 ## COG4992 Ornithine/acetylornithine aminotransferase 7 3 Op 2 8/0.111 + CDS 5233 - 6267 1483 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 8 3 Op 3 7/0.167 + CDS 6264 - 7742 1726 ## COG1012 NAD-dependent aldehyde dehydrogenases 9 3 Op 4 5/0.278 + CDS 7739 - 9064 1418 ## COG3724 Succinylarginine dihydrolase 10 3 Op 5 4/0.389 + CDS 9074 - 10039 936 ## COG2988 Succinylglutamate desuccinylase + Term 10042 - 10078 4.0 + Prom 10091 - 10150 7.2 11 4 Tu 1 . + CDS 10386 - 10868 643 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 10887 - 10951 17.9 - Term 10710 - 10760 -0.9 12 5 Tu 1 4/0.389 - CDS 10957 - 11820 963 ## COG0322 Nuclease subunit of the excinuclease complex - Prom 11842 - 11901 5.5 - Term 11879 - 11908 3.5 13 6 Tu 1 . - CDS 11919 - 12746 1231 ## COG0171 NAD synthase + Prom 12925 - 12984 3.1 14 7 Tu 1 . + CDS 13029 - 13367 484 ## Kvar_3085 SmpA/OmlA domain protein + Term 13394 - 13431 6.5 + Prom 13393 - 13452 4.0 15 8 Tu 1 10/0.111 + CDS 13646 - 13966 423 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Term 14076 - 14109 3.5 + Prom 13994 - 14053 4.1 16 9 Op 1 13/0.056 + CDS 14114 - 15472 1908 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 17 9 Op 2 5/0.278 + CDS 15526 - 15873 690 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 18 9 Op 3 4/0.389 + CDS 15901 - 16725 851 ## COG2207 AraC-type DNA-binding domain-containing proteins 19 10 Op 1 5/0.278 + CDS 16836 - 18182 1964 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 20 10 Op 2 . + CDS 18195 - 18953 951 ## COG3394 Uncharacterized protein conserved in bacteria + Term 18984 - 19016 7.0 - Term 18972 - 19004 7.0 21 11 Tu 1 . - CDS 19011 - 21269 2392 ## COG0753 Catalase - Prom 21320 - 21379 3.5 + Prom 21380 - 21439 1.8 22 12 Tu 1 . + CDS 21475 - 21714 160 ## KPN_01237 cell division modulator + Term 21725 - 21782 11.0 - Term 21725 - 21753 2.3 23 13 Tu 1 1/0.667 - CDS 21772 - 23163 2061 ## COG1823 Predicted Na+/dicarboxylate symporter - Prom 23192 - 23251 2.5 24 14 Op 1 . - CDS 23299 - 23889 462 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Prom 23913 - 23972 4.8 25 14 Op 2 . - CDS 23981 - 24742 178 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 24787 - 24846 5.6 26 15 Tu 1 . - CDS 24892 - 25560 836 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 25564 - 25623 2.0 27 16 Tu 1 . + CDS 25749 - 26285 662 ## Kvar_3072 hypothetical protein + Term 26290 - 26324 7.0 28 17 Op 1 . - CDS 26315 - 26713 526 ## COG1607 Acyl-CoA hydrolase - Prom 26742 - 26801 2.1 - Term 26775 - 26806 5.5 29 17 Op 2 . - CDS 26813 - 28996 2390 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 29056 - 29115 4.6 - Term 29038 - 29072 -0.5 30 18 Tu 1 . - CDS 29268 - 29807 790 ## COG2917 Intracellular septation protein A 31 19 Op 1 . - CDS 29862 - 30605 937 ## Kvar_3069 hypothetical protein 32 19 Op 2 . - CDS 30631 - 31044 104 ## COG0727 Predicted Fe-S-cluster oxidoreductase - Prom 31207 - 31266 4.5 + Prom 31225 - 31284 5.5 33 20 Tu 1 . + CDS 31313 - 31951 900 ## COG3047 Outer membrane protein W + Term 31959 - 31999 2.2 - Term 31953 - 31983 1.9 34 21 Op 1 2/0.500 - CDS 32036 - 32713 830 ## COG3128 Uncharacterized iron-regulated protein - Term 32723 - 32751 -0.7 35 21 Op 2 . - CDS 32762 - 35047 2507 ## COG4774 Outer membrane receptor for monomeric catechols - Prom 35235 - 35294 4.1 - Term 35588 - 35618 3.0 36 22 Tu 1 . - CDS 35749 - 36696 878 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 36742 - 36801 4.0 + Prom 36677 - 36736 5.2 37 23 Tu 1 . + CDS 36771 - 37229 627 ## COG1846 Transcriptional regulators - Term 37029 - 37066 0.0 38 24 Tu 1 . - CDS 37273 - 38181 329 ## COG0583 Transcriptional regulator - Prom 38224 - 38283 6.5 + Prom 38169 - 38228 4.2 39 25 Op 1 . + CDS 38310 - 39620 1346 ## COG0477 Permeases of the major facilitator superfamily 40 25 Op 2 . + CDS 39635 - 40723 1025 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 41 25 Op 3 . + CDS 40726 - 41985 660 ## COG2379 Putative glycerate kinase + Term 41989 - 42030 9.1 - Term 42161 - 42197 7.0 42 26 Op 1 37/0.000 - CDS 42204 - 43013 377 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 43 26 Op 2 13/0.056 - CDS 43013 - 44206 1657 ## COG0133 Tryptophan synthase beta chain 44 26 Op 3 21/0.000 - CDS 44216 - 45574 1846 ## COG0134 Indole-3-glycerol phosphate synthase 45 26 Op 4 10/0.111 - CDS 45578 - 47173 2126 ## COG0547 Anthranilate phosphoribosyltransferase 46 26 Op 5 . - CDS 47173 - 48735 2017 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 48875 - 48934 5.5 47 27 Op 1 6/0.222 + CDS 49046 - 49888 804 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 48 27 Op 2 . + CDS 49905 - 50525 1026 ## COG0009 Putative translation factor (SUA5) 49 28 Tu 1 . - CDS 50547 - 51455 893 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 51476 - 51535 3.7 50 29 Op 1 . + CDS 51567 - 52466 711 ## COG0583 Transcriptional regulator + Term 52668 - 52707 -0.8 + Prom 52539 - 52598 2.2 51 29 Op 2 . + CDS 52747 - 53649 1300 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 53650 - 53703 10.4 52 30 Op 1 5/0.278 - CDS 53710 - 54300 913 ## COG2109 ATP:corrinoid adenosyltransferase 53 30 Op 2 . - CDS 54297 - 55097 896 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 55175 - 55234 3.9 + Prom 55125 - 55184 2.8 54 31 Tu 1 . + CDS 55277 - 56359 1255 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 56369 - 56400 4.8 - Term 56352 - 56394 10.5 55 32 Tu 1 . - CDS 56407 - 56658 414 ## Kvar_3045 hypothetical protein - Prom 56805 - 56864 3.3 56 33 Tu 1 . + CDS 57065 - 59662 3066 ## COG0550 Topoisomerase IA + Term 59706 - 59753 11.2 + Prom 59807 - 59866 7.2 57 34 Tu 1 . + CDS 60004 - 60978 1142 ## COG0583 Transcriptional regulator + Prom 60992 - 61051 5.8 58 35 Tu 1 . + CDS 61224 - 61391 186 ## Kvar_3042 hypothetical protein + Term 61607 - 61635 -0.9 59 36 Tu 1 . + CDS 61782 - 64454 3337 ## COG1048 Aconitase A + Term 64461 - 64491 5.0 - Term 64449 - 64479 5.0 60 37 Tu 1 . - CDS 64501 - 65103 763 ## COG0807 GTP cyclohydrolase II + Prom 65047 - 65106 2.3 61 38 Tu 1 . + CDS 65267 - 66034 711 ## COG0671 Membrane-associated phospholipid phosphatase 62 39 Op 1 8/0.111 + CDS 66171 - 66479 202 ## PROTEIN SUPPORTED gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein 63 39 Op 2 7/0.167 + CDS 66486 - 67655 1484 ## COG2956 Predicted N-acetylglucosaminyl transferase + Prom 67735 - 67794 4.5 64 40 Op 1 6/0.222 + CDS 67845 - 68582 669 ## COG0284 Orotidine-5'-phosphate decarboxylase 65 40 Op 2 . + CDS 68582 - 68908 446 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins + Term 68977 - 69010 0.0 - Term 68935 - 68974 9.7 66 41 Tu 1 . - CDS 69038 - 69259 204 ## gi|194433800|ref|ZP_03066074.1| osmotically inducible lipoprotein B - Prom 69406 - 69465 4.9 - Term 69476 - 69522 -0.4 67 42 Op 1 . - CDS 69531 - 70280 1016 ## COG1349 Transcriptional regulators of sugar metabolism 68 42 Op 2 . - CDS 70352 - 70531 283 ## Kvar_3032 hypothetical protein - Prom 70562 - 70621 3.4 - Term 70644 - 70679 7.4 69 43 Op 1 1/0.667 - CDS 70690 - 72624 2560 ## COG4776 Exoribonuclease II - Term 72638 - 72684 2.1 70 43 Op 2 1/0.667 - CDS 72706 - 73863 968 ## COG4950 Uncharacterized protein conserved in bacteria - Prom 73975 - 74034 2.1 - Term 74011 - 74046 7.4 71 44 Tu 1 . - CDS 74054 - 74842 1125 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) - Prom 74877 - 74936 7.5 72 45 Tu 1 . - CDS 75042 - 75584 291 ## COG3758 Uncharacterized protein conserved in bacteria - Prom 75671 - 75730 5.5 + Prom 75599 - 75658 3.1 73 46 Op 1 12/0.111 + CDS 75795 - 76640 856 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 74 46 Op 2 12/0.111 + CDS 76652 - 77371 838 ## COG4215 ABC-type arginine transport system, permease component 75 46 Op 3 6/0.222 + CDS 77381 - 78112 815 ## COG4160 ABC-type arginine/histidine transport system, permease component 76 46 Op 4 . + CDS 78114 - 78908 211 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 77 46 Op 5 . + CDS 78905 - 80404 1377 ## COG2986 Histidine ammonia-lyase 78 47 Op 1 8/0.111 - CDS 80433 - 81254 440 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 79 47 Op 2 8/0.111 - CDS 81244 - 82236 479 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 80 47 Op 3 . - CDS 82236 - 83126 1429 ## COG4171 ABC-type antimicrobial peptide transport system, permease component - Prom 83242 - 83301 4.3 81 48 Tu 1 . - CDS 83486 - 83971 -157 ## - Prom 84077 - 84136 3.1 82 49 Tu 1 . + CDS 84275 - 84490 64 ## COG0582 Integrase 83 50 Op 1 . - CDS 84958 - 85266 220 ## KPK_3136 hypothetical protein 84 50 Op 2 . - CDS 85263 - 86045 320 ## E2348C_2779 hypothetical protein 85 50 Op 3 . - CDS 86064 - 86675 58 ## Z1454 putative DNA N-6-adenine-methyltransferase of bacteriophage BP-933W 86 50 Op 4 . - CDS 86704 - 87324 242 ## LHK_01497 exonuclease 87 50 Op 5 . - CDS 87324 - 88070 503 ## LHK_01498 recombination protein bet 88 50 Op 6 . - CDS 88087 - 88371 286 ## ECL_01296 hypothetical protein 89 50 Op 7 . - CDS 88452 - 88658 118 ## ECP_1143 FtsZ inhibitor protein; Reviewed; region: kil; PRK11354 + Prom 89014 - 89073 7.0 90 51 Tu 1 . + CDS 89095 - 89298 289 ## SARI_02671 hypothetical protein - Term 89298 - 89327 1.1 91 52 Tu 1 . - CDS 89328 - 89810 -191 ## ECED1_2552 hypothetical protein - Prom 89837 - 89896 2.9 92 53 Tu 1 . - CDS 89972 - 90406 100 ## ECED1_2551 hypothetical protein 93 54 Tu 1 . - CDS 90626 - 91042 264 ## COG2932 Predicted transcriptional regulator + Prom 91340 - 91399 4.3 94 55 Op 1 . + CDS 91420 - 91653 126 ## ECL_01302 predicted antirepressor protein Cro 95 55 Op 2 . + CDS 91693 - 92013 168 ## KPK_4174 hypothetical protein 96 55 Op 3 . + CDS 92100 - 92246 134 ## gi|262043739|ref|ZP_06016844.1| conserved hypothetical protein 97 55 Op 4 . + CDS 92287 - 93138 445 ## ESA_03084 hypothetical protein 98 55 Op 5 . + CDS 93128 - 94558 770 ## COG0305 Replicative DNA helicase 99 55 Op 6 . + CDS 94558 - 94860 214 ## gi|290512995|ref|ZP_06552359.1| predicted protein 100 55 Op 7 . + CDS 94857 - 95138 290 ## gi|290512996|ref|ZP_06552360.1| predicted protein 101 56 Op 1 . + CDS 95278 - 95475 117 ## 102 56 Op 2 . + CDS 95468 - 95773 213 ## gi|290512997|ref|ZP_06552361.1| predicted protein 103 56 Op 3 . + CDS 95773 - 96066 308 ## SeD_A0607 GP43 104 56 Op 4 . + CDS 96063 - 96383 160 ## ECO111_1120 hypothetical protein 105 56 Op 5 . + CDS 96414 - 96677 59 ## ECO103_5162 hypothetical protein + Prom 96778 - 96837 5.5 106 57 Tu 1 . + CDS 96857 - 97060 84 ## 107 58 Tu 1 . + CDS 97473 - 98066 -152 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 98121 - 98153 1.5 + Prom 98069 - 98128 3.0 108 59 Tu 1 . + CDS 98249 - 98407 172 ## KPK_4159 DNA polymerase III theta subunit (EC:2.7.7.7) + Prom 98411 - 98470 2.4 109 60 Tu 1 . + CDS 98514 - 99110 450 ## STY2052 hypothetical protein + Term 99235 - 99272 -0.7 110 61 Tu 1 . + CDS 99319 - 99609 203 ## SSON_2444 hypothetical protein 111 62 Tu 1 . + CDS 99741 - 99968 107 ## COG4570 Holliday junction resolvase 112 63 Tu 1 . + CDS 100270 - 100791 264 ## ECL_03212 phage antitermination protein Q + Term 100861 - 100896 4.0 113 64 Tu 1 . + CDS 100980 - 101120 61 ## + Term 101141 - 101191 5.8 + Prom 101273 - 101332 6.0 114 65 Op 1 . + CDS 101432 - 101743 290 ## ECS88_2894 holin protein 115 65 Op 2 . + CDS 101740 - 102279 378 ## COG3926 Putative secretion activating protein 116 65 Op 3 . + CDS 102276 - 102620 228 ## PANA_0897 Hypothetical Protein 117 65 Op 4 . + CDS 102617 - 102892 218 ## KP1_2178 hypothetical protein 118 65 Op 5 . + CDS 102837 - 103037 126 ## ECL_01681 hypothetical protein + Prom 103671 - 103730 4.5 119 66 Tu 1 . + CDS 103851 - 104096 310 ## Kvar_2099 hypothetical protein + Term 104141 - 104171 -0.6 + Prom 104657 - 104716 5.7 120 67 Op 1 . + CDS 104959 - 105951 617 ## Kvar_2100 terminase small subunit 121 67 Op 2 . + CDS 105929 - 107236 809 ## KPN_01413 hypothetical protein 122 67 Op 3 . + CDS 107236 - 108636 701 ## YE2324 hypothetical protein 123 67 Op 4 . + CDS 108707 - 109732 198 ## KPN_01415 hypothetical protein + Term 109754 - 109784 2.1 124 68 Op 1 . + CDS 109817 - 110602 335 ## YE2322 hypothetical protein 125 68 Op 2 . + CDS 110613 - 111566 849 ## COG5492 Bacterial surface proteins containing Ig-like domains 126 69 Op 1 . + CDS 111888 - 112283 244 ## ECSE_1441 hypothetical protein 127 69 Op 2 . + CDS 112285 - 112539 152 ## HCM2.0074c hypothetical protein + Term 112657 - 112715 -0.6 + Prom 112681 - 112740 2.5 128 70 Op 1 . + CDS 112769 - 113152 228 ## Kvar_2109 hypothetical protein 129 70 Op 2 . + CDS 113154 - 113705 286 ## Kvar_2110 hypothetical protein 130 70 Op 3 . + CDS 113741 - 114094 69 ## KPN_01424 putative electron transfer flavoprotein subunit beta 131 70 Op 4 . + CDS 114118 - 115290 393 ## Kvar_2112 hypothetical protein + Term 115299 - 115339 3.2 132 71 Tu 1 . + CDS 115344 - 115826 211 ## Kvar_2113 hypothetical protein 133 72 Op 1 . + CDS 115994 - 116170 142 ## Kvar_2114 hypothetical protein 134 72 Op 2 . + CDS 116247 - 116603 180 ## ETA_24170 hypothetical protein + Term 116604 - 116647 6.4 135 73 Op 1 . + CDS 117156 - 119813 701 ## COG5281 Phage-related minor tail protein 136 73 Op 2 . + CDS 119813 - 120286 418 ## KPN_01430 alkanesulfonate ABC transporter membrane protein 137 73 Op 3 . + CDS 120273 - 120755 355 ## CKO_01850 hypothetical protein 138 73 Op 4 . + CDS 120765 - 121145 373 ## Kvar_2119 hypothetical protein 139 73 Op 5 . + CDS 121142 - 124177 1567 ## KPN_01432 putative kinase + Prom 124779 - 124838 80.3 140 74 Tu 1 . + CDS 125078 - 126386 470 ## Predicted protein(s) >gi|289774508|gb|GG745515.1| GENE 1 2 - 644 805 214 aa, chain - ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 20 214 18 211 389 293 76.0 2e-79 MRRLRDFSLCLCLLLLWPQAVNANDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEE VKRHYAIDLRIVPIADAADAVKRIQSEAQAGRRRGGSVDLLWINGENFRTLKQANLLLTG WAESLPNWRFVDLQKPVREDFSVATDGTESPWGSAQLTFIARRGQTPQPPTSPQALLAFA RAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAA >gi|289774508|gb|GG745515.1| GENE 2 647 - 1207 672 186 aa, chain - ## HITS:1 COG:ynjA KEGG:ns NR:ns ## COG: ynjA COG2128 # Protein_GI_number: 16129707 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 178 1 178 182 286 79.0 2e-77 MSLPPLDSVPLILRPQAWLHRRHYGQVLSPIRWWGRIPWLFYLVSLFVGYIERRRSPLDP VLRSLVSARIAQLCHCEFCIDITSMTLAARSGSQDKLLAVADWRSSTLFSEKERLALAYA EAATQTPPEVDDALRSAMAAHFDARALTELTALIGLQNLSARFNAAMAIPAQGLCQMPTS SPQNKE >gi|289774508|gb|GG745515.1| GENE 3 1204 - 1914 938 236 aa, chain - ## HITS:1 COG:ECs2458 KEGG:ns NR:ns ## COG: ECs2458 COG0398 # Protein_GI_number: 15831712 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 268 63.0 6e-72 MTQPDRRHLRRARLALAVVAVAGLAAWWWFPGGRAFLQQSLTALASLDPQQVRGFIAAWG PQAALVSFALMILQAIVAPLPAFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARAL GREVVEKLTGRAVLRSVDGYFTRFGPQTILVCRLLPFVPFDPVSYAAGLTSLRFWPFMLA TGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP >gi|289774508|gb|GG745515.1| GENE 4 1901 - 2557 813 218 aa, chain - ## HITS:1 COG:ydjX KEGG:ns NR:ns ## COG: ydjX COG0398 # Protein_GI_number: 16129704 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 9 206 38 235 252 249 69.0 3e-66 MATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYVALFIIATLCLIPGSLLVIAGG MLFGPLTGSLLSFAAATLASGLSFLIARWLGRDLLQRYVGHTAVFQAIERGIARSGCDFL ILTRLVPLFPYNIQNYAYGLTAIPFWPFTLISAVTTLPGLVIYSVMASELAREGVTLAFA LKLSLAGGLLFALVQMGKRFARARRVATPGEEVRHDPT >gi|289774508|gb|GG745515.1| GENE 5 2771 - 3577 1030 268 aa, chain - ## HITS:1 COG:xthA KEGG:ns NR:ns ## COG: xthA COG0708 # Protein_GI_number: 16129703 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Escherichia coli K12 # 1 267 1 267 268 510 91.0 1e-145 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK GHYGVALLTKDTPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL PEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR CVETGIDYEIRGMEKPSDHAPVWATFRP >gi|289774508|gb|GG745515.1| GENE 6 4016 - 5236 1590 406 aa, chain + ## HITS:1 COG:ECs2454 KEGG:ns NR:ns ## COG: ECs2454 COG4992 # Protein_GI_number: 15831708 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 685 81.0 0 MSQSITRNHFDEWMMPVYAPAAFIPVRGAGSRLWDQQGKEYIDFAGGIAVNALGHAHPRL VQALTDQASKFWHTGNGYTNEPILRLAKMLIDATFADRVFFCNSGAEANEAALKLARKYA HDRFGSEKSGIVAFQNAFHGRTLFTVSAGGQPAYSRDFAPLPPQIQHAVFNDLESAKALI NDQTCAVIVEPVQGEGGVVPASGEFLRGLRQLCDQHNALLIFDEVQTGVGRTGELYAYMH YGVTPDVLTTAKALGGGFPIGALLATEACASVMTVGTHGTTYGGNPLAGAVAGELLSIVN TPEVLSGVRQRHQWFCERLQAINARYGLFKEIRGLGLLLGCVLNDAWAGKAKTLSNLAAE EGVMILIAGANVVRFAPALNVSEEEVNSGLDRVERACARFVAGVSS >gi|289774508|gb|GG745515.1| GENE 7 5233 - 6267 1483 344 aa, chain + ## HITS:1 COG:ECs2453 KEGG:ns NR:ns ## COG: ECs2453 COG3138 # Protein_GI_number: 15831707 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Escherichia coli O157:H7 # 1 344 1 344 344 587 79.0 1e-167 MMVIRPVEPGDLPGLLKLAAETGGGLTSLPVDEATLAARIARSQQTWRGELPKSEQGYVF VLEESESGAVVGICAIEVAVGLNDPWYNYRVGTQVHASKELNVYQALPTLFLSNDHTGSS ELCTLFLDPQWRKEGNGYLLSKSRFLFMAAFRERFNEKVVAEMRGVIDEQGYSPFWESLG KRFFAMEFSRADYLCGTGQKAFIAALMPKHPLYIDFLSPEAQAVIGKVHPQTAPARTVLE KEGFRYLNYIDIFDGGPTLECDIDRVRAIRKSRLVTTEAGETPPGDWPLCLVANEQYHQF RALLVHADPDGDTLTLSARELDMLKCHAGDQVRMVRLIPEEKTA >gi|289774508|gb|GG745515.1| GENE 8 6264 - 7742 1726 492 aa, chain + ## HITS:1 COG:astD KEGG:ns NR:ns ## COG: astD COG1012 # Protein_GI_number: 16129700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 486 1 486 492 752 77.0 0 MSLWINGEWRPGRGPGFSKQDPVNLKVVWQGEAADAGQVAEAVAAARQAFPAWARLPFAA RQAIVEKFAALLEASKAELTAMIGAETGKPRWEAAGEVTAMINKVAISVKAYHVRTGEQH SDLPDGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPCSGEAV VKLWQQAGLPAGVLNLVQGGRETGEALSGQADIDGLLFTGSSTTGFHLHRQLAGQPQKIL ALEMGGNNPLIVDDPRDVDAAVHLTIQSAFITAGQRCTCARRLLVRRGEAGDAFLSRLVT VCQRLIPAAWDAEPQPFLGGLISEPAAQKVHQAWLQRVAAGAVTLLEPRLLQAGTSLLTP GIVDMSDVANVEDEEVFGPLLGVWRYDTFEEAIALANATRFGLSCGLISPEREKFDRLLL EARAGIVNWNKPLTGAASTAPFGGTGASGNHRPGAWYAADYCAWPMASLESPTLTLPASL NPGLDFLAGEAS >gi|289774508|gb|GG745515.1| GENE 9 7739 - 9064 1418 441 aa, chain + ## HITS:1 COG:astB KEGG:ns NR:ns ## COG: astB COG3724 # Protein_GI_number: 16129699 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Escherichia coli K12 # 1 441 1 441 447 661 75.0 0 MTAREVNFDGLPGLTHHYAGLSFGNEASTRHRHRVSNPQLAAKQGLKKMKALADAGYPQA VIPPQERPNVPLLRQLGFSGSDEQVVARAAQQDPDLLSAVSSASAMWVANAATVCPSADS LDGLVHLTVANLQDKFHRASEAPTTEALLQAIFPDRTRFAIHPALPASAWFGDEGAANHN RLGGEYGAPGVQLFVYGRRRGSEEAPRRYPARQTLEASQAVARLNQVNPRQLIFARQHPT AIDTGVFHNDVIAVSNRQVLFCHEQAFADQTALLQQLAQRVPGFTPLVVPASRVTVAEAV ATYLFNSQLLSRADGSMALILPHEAQEHAGVWEYLNELLAGDNPIAALQVFDLRESMANG GGPACLRLRVVLTAEEYQAVNPHVLMNDTLFATLNDWVDRYYRDRLTQADLADPQLLREG RDALDRLTQILQLGSVYPFQQ >gi|289774508|gb|GG745515.1| GENE 10 9074 - 10039 936 321 aa, chain + ## HITS:1 COG:ydjS KEGG:ns NR:ns ## COG: ydjS COG2988 # Protein_GI_number: 16129698 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Escherichia coli K12 # 1 321 1 322 322 400 64.0 1e-111 MEHFLALTLAGRLPHHFHGETAHFRWHWLGEGILELTPHARCERGLVLSCAIHGNETAPV EIVDHLVQRLVREALPLRWRLLVIVGNPPALRANKRYLHSDMNRMFGERWRQFPLSEETQ RAQRLEQAVARFYRDHGGPRWHLDLHTAIRGSLHPRFGVLPARDTPWEEDFLHWLGGAGL EALVFHRQPGGTFTHFSCERFAALACTLELGKALPLGENDLTQFAAAEGALSRLLVGDLA IADAPAPLRYRVVQQITRHSDDFRLHMADQTLNFTPFEPGTLLAEEGETRYVVGPEPEYV LFPNPTVAKGLRAGLMLEKLS >gi|289774508|gb|GG745515.1| GENE 11 10386 - 10868 643 160 aa, chain + ## HITS:1 COG:spy KEGG:ns NR:ns ## COG: spy COG3678 # Protein_GI_number: 16129697 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli K12 # 1 160 1 161 161 178 78.0 4e-45 MKKLTALFVASTLALGAANLAHAADTTTAPSDSKPMMMHHKGGPGQHDMMFKGLNLTDAQ KQQIRDIMKSQRENMKRPSLDERRAMHDLIASDTFDKAKAEAQIDKMEAQHKAMALSRLE TQNKIYNILTPEQKKQFNANFEKHLTERNAPAGKMPAPAE >gi|289774508|gb|GG745515.1| GENE 12 10957 - 11820 963 287 aa, chain - ## HITS:1 COG:ECs2447 KEGG:ns NR:ns ## COG: ECs2447 COG0322 # Protein_GI_number: 15831701 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 286 1 286 295 436 75.0 1e-122 MARKQSAPRLEFEAAAIYEYPEHLRPWLEALPKLPGVYQFHGDSDTMPLYIGKSVNLRSR VLSHLRTPEEAAMLRQSRRITWQRTAGELGALLLEARLIKEQQPLFNKRLRRNKQLCAWR LADHRPQIVYAREVDFSHQQHLYGLFANRRAALQMLQSLADEQRLCYGLLGLEPLSRGRA CFRSALGRCAGACCGKESVEAHSERLLAQMSKLQLVCWPWAGPVALEERGPDMTQYHVIH NWLWLGAVDSLDQAAELTRLPAGFDQDGYKILCKPLLSGHYPLHPLG >gi|289774508|gb|GG745515.1| GENE 13 11919 - 12746 1231 275 aa, chain - ## HITS:1 COG:nadE KEGG:ns NR:ns ## COG: nadE COG0171 # Protein_GI_number: 16129694 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Escherichia coli K12 # 1 275 1 275 275 506 90.0 1e-143 MTLQQEIIQALGAKPQIDVAGEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLTGKLC QMAINELRAETGDSSLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKASVLASEQ ALREAGIELSDFVRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTD INPIFRLNKRQGKQLLAHLGCPEHLYKKLPTADLEDDRPSLPDEVALGVTYENIDDYLEG KTLDPSIAKTIEGWYLKTEHKRRPPITVFDDFWKK >gi|289774508|gb|GG745515.1| GENE 14 13029 - 13367 484 112 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3085 NR:ns ## KEGG: Kvar_3085 # Name: not_defined # Def: SmpA/OmlA domain protein # Organism: K.variicola # Pathway: not_defined # 1 112 1 112 112 212 100.0 3e-54 MNKSLAGILGVTVALTLLAGCTAYDRTKDQFTQPVVKDVKKGMSRQQVMQIAGKPSTEVT MVHARGTCQTYILGQRDGKVETYFVALDDTGHVINSGYQTCAEYDTDPRNAK >gi|289774508|gb|GG745515.1| GENE 15 13646 - 13966 423 106 aa, chain + ## HITS:1 COG:ECs2444 KEGG:ns NR:ns ## COG: ECs2444 COG1440 # Protein_GI_number: 15831698 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 93 1 93 106 166 96.0 1e-41 MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAYPETLAGEKGPAADVVLLGPQI AYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAQ >gi|289774508|gb|GG745515.1| GENE 16 14114 - 15472 1908 452 aa, chain + ## HITS:1 COG:STM1313 KEGG:ns NR:ns ## COG: STM1313 COG1455 # Protein_GI_number: 16764664 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 452 1 452 452 736 89.0 0 MSKVIDSLEKVLLPFAVKIGKQPHINAIKNGFIKLMPLTLAGAMFVLINNVFLSFGEGSF FYSMGIRLDASTIETLNGFKAIGGNVYNGTLGIMSLMAPFFIGSALAEERKVDPMAAGLL AVAAFMTVTPYSVGEAYAVGANWLGGQNIISGMIIGLVVAELFTFVIRRNWVIRLPDSVP GSVSRSFSALIPGFLILSIFGIISWALSSYGSNFHQIIMDSISTPLAAMGSVVGWAYVIF NSLLWFFGVHGSLALTALDNGIMTPWALENIALYNQYGSVDAAIEAGKQFHFWAKPMLDS YILLGGSGATLGLIIAIFIASRRADHRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIP FVLVQPILAAITLAAYSLGIIPPVTNLAPWTMPTGLGAFFNSNGSVAALLVALFNLGVAT LVYLPFVVLSNKAQTVIEQEESEEDIANALKF >gi|289774508|gb|GG745515.1| GENE 17 15526 - 15873 690 115 aa, chain + ## HITS:1 COG:ECs2442 KEGG:ns NR:ns ## COG: ECs2442 COG1447 # Protein_GI_number: 15831696 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 115 1 115 116 144 81.0 3e-35 MFDLDNIDAVETPENDLEEVVMGLIINSGQARSLAYGALKQAKQGDFAAAKAMMEQSRQA LSEAHRVQTQLIESDEGEGKMKVSLVLVHAQDHLMTSMLARELVAELIELHEKVQ >gi|289774508|gb|GG745515.1| GENE 18 15901 - 16725 851 274 aa, chain + ## HITS:1 COG:celD KEGG:ns NR:ns ## COG: celD COG2207 # Protein_GI_number: 16129689 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 5 274 10 279 280 437 83.0 1e-122 MMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEINGKRVL LERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYAVQSAF LGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVIPQWLKNTVEAMHDKL KFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYSVTDIA YESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN >gi|289774508|gb|GG745515.1| GENE 19 16836 - 18182 1964 448 aa, chain + ## HITS:1 COG:ECs2440 KEGG:ns NR:ns ## COG: ECs2440 COG1486 # Protein_GI_number: 15831694 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 447 1 447 450 828 86.0 0 MSQKLKVVTIGGGSSYTPELLEGFLKRYHELPVTELWLVDVEEGQEKLDIIHALCERMVE KAGVPMKVYKTLDRRAALQGADFVTTQLRVGQLKAREKDERIPLSHGYLGQETNGAGGLF KGLRTIPVIFDIVKDVQEICPDAWIINFTNPAGMVTEAVYRHTSFKRFIGVCNIPIGMKM FITDVLQLSPSDELNIDLFGLNHLVFVRDVLVNGVSRFDELLDGVASGRLTANSVKNIFD LPFSEGLIRSLRLIPCSYLLYYFKPKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP DLKVKPKELEQRGGAYYSDAACEVINAIYNDKQTEHYVNIPHHGHVDNIPADWAVEMSCT LGRDGAKPTPRITHFDEKVLGLIYTIKGFEVAASQAAISGELNDVLLALNLSPLIHSDRD AEQLAREMILAHEKWLPNFAATIEKLKS >gi|289774508|gb|GG745515.1| GENE 20 18195 - 18953 951 252 aa, chain + ## HITS:1 COG:ECs2439 KEGG:ns NR:ns ## COG: ECs2439 COG3394 # Protein_GI_number: 15831693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 383 74.0 1e-106 MERVLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGAAIDHAAQLSRSTPELAVGM HFVLTLGEPLSAMPGLTREGRLGKWIWQQAEEGRLPLEEIAHELACQYRRFVDLFGHEPT HLDSHHHVHMISPIYPIVAAFAREKGIALRIDRQVAAQSGLDQQAARSSAGFSSEFYGEA VSEELFLQTLDASIARGERSLEVMCHPAFVDQTIMGSAYCYPRLGELDVLTSAALKAAVA DRGYRLGTYRDV >gi|289774508|gb|GG745515.1| GENE 21 19011 - 21269 2392 752 aa, chain - ## HITS:1 COG:ECs2438 KEGG:ns NR:ns ## COG: ECs2438 COG0753 # Protein_GI_number: 15831692 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Escherichia coli O157:H7 # 7 752 8 753 753 1251 81.0 0 MSDKHPNPHHQQAPVHDSEEAKPGLDSLAPDDQEWRPTPKPTAPGAEPTAPGSLKAPDTH SNKLDALEPQRKGGEDYPLTTNQGVRIADDQNSLRAGARGPTLLEDFILREKITHFDHER IPERIVHARGSAAHGYFQPYKSLTALTKADFLSAADKITPVFVRFSTVQGGAGSADTVRD IRGFATKFYTDEGIFDLVGNNTPVFFIQDAMKFPDFVHAVKPEPHWAIPQGQSAHDTFWD YVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPVAGKAS LVWDEAQKLTGRDPDFHRRDLWEAIEAGDYPEFELGLQLIPEENEFDFDFDLLDPTKLIP EALVPVLRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGIDFSNDPLLQGRLFSYTDTQIS RLGGPNFHEIPINRPTCPYHNFQRDGMHRMDIDTNPANYEPNSINDNWPRETPPAAKRGG FESLAERVDGEKIRQRSPSFGEYYAQPRLFWLSQTPIEQQHIIDGFSFELSKVVRTWIRE RVVDHLAHIDTKLAEAVGANLGIELSDDQRNITLPSPVNGVEKDPSLSLYADAEGDVKGR VVAVLLNERTSAQDLVHLLQALQAQGVHSKLLYSRMGEVIADDGSPLPIAGTFAGSPSLT VDAVVVPGGDLSALSQSGDARYYLLEAYKHLKPILLAGDARQLTSVLQVPAQGEEGVIVT DALDTPAADTLLALMTAHRVWSRSPKIAAIPA >gi|289774508|gb|GG745515.1| GENE 22 21475 - 21714 160 79 aa, chain + ## HITS:1 COG:no KEGG:KPN_01237 NR:ns ## KEGG: KPN_01237 # Name: cedA # Def: cell division modulator # Organism: K.pneumoniae # Pathway: not_defined # 1 79 32 110 110 155 100.0 6e-37 MKPLRQQNRPVISYVPRVEPAPPEHAVKMDHFRDVWILRGKYVAFLLMGEHFRRSPAFSV PESAQRWANQVRQEGEIEA >gi|289774508|gb|GG745515.1| GENE 23 21772 - 23163 2061 463 aa, chain - ## HITS:1 COG:ydjN KEGG:ns NR:ns ## COG: ydjN COG1823 # Protein_GI_number: 16129683 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Escherichia coli K12 # 1 462 1 462 463 705 91.0 0 MNFPLIANVVVFAVLLFALGQTRHKQWSLARKVLVGLAIGVVFGLALQLIYGSDSQVLKD SIQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLSIGTLLFTTLIAA LVGVLVTNMFGLTAEGLVQGSAETARLNAIQSNYVGKVADLSVPQLILSFVPKNPFADLT GANPTSIISIVIFSAFLGVAALKLLKEDVEKGQRVLTAIDTLQGWVMKLVRLVMQLTPYG VLALMTKVVAGSNLQDIIKLGGFVVASYIALGIMFVVHGLLLAINGISPLKYFRKVWPVI TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFSASFGATIGQNGCAGIYPAMLAVMVAP TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL IDMGRTALNVNGSMTAGTLTSQWLRQTDKSIFDSEEEAELAHR >gi|289774508|gb|GG745515.1| GENE 24 23299 - 23889 462 196 aa, chain - ## HITS:1 COG:ECs2434 KEGG:ns NR:ns ## COG: ECs2434 COG1988 # Protein_GI_number: 15831688 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 193 5 197 200 332 84.0 2e-91 MTAEGHLFFSIACAVFAKNAELTPVLAQGDWWHIVPSAVLTCLLPDIDHPKSFLGQRLSW ISKPVARAFGHRGFTHSLLAVFGALTLFYLKVPDSWIVPADALQGLVLGYLSHILADMLT PAGVPLLWPCRWRFRLPILAPRKGNQLERALCMALFVYAVWMPQTLADNSAIRWSSGVIN SLQITFNRFISHQSGR >gi|289774508|gb|GG745515.1| GENE 25 23981 - 24742 178 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 11 248 4 238 242 73 26 6e-12 MVLNAFDLTGKVAIVTGCDTGLGQGMTLGLAQAGCDIVGINRKIPHDTAAQVQALGRRFH AIQADLSRQDEMSVLVDQAVAAMGRVDILVNNAGIIRRHDALTFTESDWDAVIDLNLKAV FFLSQAVARQFIRQGDGGKIINIASMLSFQGGIRVPSYTASKSGVLGLTRLLANEWAGQR INVNAIAPGYMATNNTQALREDEERNQAILERIPAGRWGEPKDLQGPVVFLASAAADYIN GYTLAVDGGWLAR >gi|289774508|gb|GG745515.1| GENE 26 24892 - 25560 836 222 aa, chain - ## HITS:1 COG:STM1322 KEGG:ns NR:ns ## COG: STM1322 COG0637 # Protein_GI_number: 16764673 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 221 1 221 222 316 77.0 2e-86 MSAKRRIEAAIFDMDGLLIDSEPLWDQAEVEVMESLGVDTRRRDELPDLLGLRIDLVVDL WYAQQPWHGVDRAEATARIIRRAIELVEASRPLLPGVREAVALCKARGLKVGLASASPLV MLEKVLNMFELRDQFDALASAEHLPWSKPHPQVYLNCAAALGVDPQRCVALEDSVNGMIA SKAARMRAIVVPEAENSRDPRFVLADVKLPSLQALTAEALLV >gi|289774508|gb|GG745515.1| GENE 27 25749 - 26285 662 178 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3072 NR:ns ## KEGG: Kvar_3072 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 178 1 178 178 324 100.0 8e-88 MTYQQAGRIAVIKRILGWVIFIPAVLSTLISVLKFMYEHSEKKPGIDAVMMDFAHVMIEM MRFNTPFLNFFWYNSPLPDFHHSLNIGFWIIFILVFVGMALQASGARMARQAKFLREGIE DQLILEQAKGAEGLSREQLAERIVVPRHTILVQYFPLYVLPVIVIIIGYFFFSLLGFL >gi|289774508|gb|GG745515.1| GENE 28 26315 - 26713 526 132 aa, chain - ## HITS:1 COG:STM1736 KEGG:ns NR:ns ## COG: STM1736 COG1607 # Protein_GI_number: 16765080 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Salmonella typhimurium LT2 # 1 132 1 132 133 232 87.0 1e-61 MTTTDLAPKGEMVLRTLAMPADTNANGDIFGGWLMSQMDIGGAIMAKEIAQGRVVTVRVD GMTFLRPVAVGDVVCCYARCVKRGNTSVTINIEVWVKKVSSEPIGQRYKATEALFIYVAV DNQGKPRALPAE >gi|289774508|gb|GG745515.1| GENE 29 26813 - 28996 2390 727 aa, chain - ## HITS:1 COG:STM2777 KEGG:ns NR:ns ## COG: STM2777 COG4771 # Protein_GI_number: 16766089 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 12 727 12 726 726 928 66.0 0 MRSPQYSVPTTLALVISSLLAPNAFAEESEQDTETMIVRSTAEEVLKQQPGVSIITADDI AKQPPVNDLSDIIRKMPGVNLTGNSASGSRGNNRQIDIRGMGPENTLILIDGVPVTSRNA VRYSWRGERDTRGDSNWVPAEMVERIEVLRGPAAARYGSGAAGGVVNIITKRPTNNWHGS LSFFTNQPENNKEGTTNRANFNLSGPLAGEALTMRLYGNINKTEPDAWDINHAQNGSYAA GREGVRNKDINALLSWKMTPQQILDFSYAYSRQGNIYAGDTQYSNGNLSPNGLVDSLYGH ETNRLYRQSWGLTYNGLWDWGQSKAGVYYEKTNNTRLQEGSTGRVEGMINSEDYATSRLE SWRTTSEFNVPFFWLADQTLTLGMEWNHDQLDDPASMQATNSNGETIPGTSGDPTQRSTK NSATLTGIYLEDNIEAVPGTNLIPGIRFDYHNQFGSNWSPSLNLSQALSDMFTLKAGIAR VFKAPNLYQSSEGYLLSTRGNGCPNTIAEGSCYLLGNPDLDPEISINKEIGIEFNLNGYA AGVTWFRNDYKNKIVSGTEVLGYTSSGNNILQWQNGGKAVVEGLEGNLLIPVLRDVLSWR TNATWMLKSESKETGNPLSVIPKYTVNTMLDWQVNDTLSANVNWTLYGRQKPRQYAEIRN ETGTLATTEVGAYSIVGIGTQYQLNRDIRLNAGISNLFDKQLYRENAGASTYNEPGRAYY AGVTLSF >gi|289774508|gb|GG745515.1| GENE 30 29268 - 29807 790 179 aa, chain - ## HITS:1 COG:STM1735 KEGG:ns NR:ns ## COG: STM1735 COG2917 # Protein_GI_number: 16765079 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Salmonella typhimurium LT2 # 1 177 1 177 179 282 94.0 2e-76 MKQFLDFLPLVVFFAFYKLYDIYAATTALIVATAIVLIYSWVRYRKVEKMALITFVLVAV FGGLTLFFHNDEFIKWKVTVIYALFAGALLFSQWVMKKPLIQRMLGKELALPQQVWSRLN LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLVFTLLSGIYIYRHMPQDDHH >gi|289774508|gb|GG745515.1| GENE 31 29862 - 30605 937 247 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3069 NR:ns ## KEGG: Kvar_3069 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 247 1 247 247 346 100.0 4e-94 MSITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGHAFSPSDEQLSILSEGDNLAGS AGLFELVQNMTPEQQQVLLRASAASTFSGLVGNAILAGGVLLLIQLVSAGHRVSALRAIG ASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAFAPIMLVQDKMGILSAMRSSM RLAWANLRLVAPAIIGWLVAKTLLLLFASSFAVLTPNVGAVVINTISNLISALLLIYLFR VYMLIRN >gi|289774508|gb|GG745515.1| GENE 32 30631 - 31044 104 137 aa, chain - ## HITS:1 COG:STM1733 KEGG:ns NR:ns ## COG: STM1733 COG0727 # Protein_GI_number: 16765077 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Salmonella typhimurium LT2 # 1 137 1 134 134 177 68.0 5e-45 MSEINPCMTCGACCAYFRVSFYWAEADDAGGLVPSALTEPLTPFLRCMSGTNQRQSRCAA LSGDIGDAVHCTIYENRPSPCREFAMSGENGEENDACNRARARYGLPPLRPLYKDIPALN GAESATRERFAVQSPAS >gi|289774508|gb|GG745515.1| GENE 33 31313 - 31951 900 212 aa, chain + ## HITS:1 COG:ompW KEGG:ns NR:ns ## COG: ompW COG3047 # Protein_GI_number: 16129217 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli K12 # 1 212 1 212 212 333 80.0 1e-91 MKKLAAAALILSTLSTGSVWAHEAGEFFIRAGTATVRPTEGSDNVLGSLGSFNVSNNTQL GLTFTYMATDNIGVELLAATPFRHKVGTGPTGTIATVHQLPPTLMAQWYFGDAQSKVRPY VGAGINYTTFFNEDFNDTGKAAGLSDLSLKDSWGAAGQVGLDYLINRDWLLNMSVWYMDI DTDVKFKAGGVDQKVSTRLDPWVFMFSAGYRF >gi|289774508|gb|GG745515.1| GENE 34 32036 - 32713 830 225 aa, chain - ## HITS:1 COG:ybiX KEGG:ns NR:ns ## COG: ybiX COG3128 # Protein_GI_number: 16128772 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Escherichia coli K12 # 1 225 13 237 237 352 72.0 3e-97 MMYHIPDVLSADQVAEFTRQLAQAEWVDGRVTVGSQGAAVKQNQQIDTRTPLYARLQAAV LDALRGHPQFFSAALPRTISAPLFNRYGPGETYGFHVDGAVRQNGEAGWMRTDLSATLFL CEPESYEGGELVIEDTYGQHRVKLPAGHLVLYPASSLHCVTPVTRGVRQASFLWIQSMVR DDKQRAMLYDLDRTIQSLKARFGDGEEVLSLLNMYHNLLRQWTEV >gi|289774508|gb|GG745515.1| GENE 35 32762 - 35047 2507 761 aa, chain - ## HITS:1 COG:fiu KEGG:ns NR:ns ## COG: fiu COG4774 # Protein_GI_number: 16128773 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for monomeric catechols # Organism: Escherichia coli K12 # 1 761 1 760 760 1118 77.0 0 MEKNASLPFGSFNSLALFTGLCLGASPATGIAAEKSVKNSEETLVVEATPPSLYSPGASG DPKFNKPLVDTTRTITVIPEQVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIYM RGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTDYGRSAPSGSINMISKQPRLD SGIDGSASIGSAWSRRGTLDLNQAFSDSAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTNNFYGTDS DYDKSTTDSGTLRFEHDLTDNTTVRNTTRWSRVKQEYLLTAVMGGASNITAPDINDVNTW SWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVEFTRENQTNYGVNAMTAPAVN LYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERFEVNGGLRLDNYHTKYDSAT ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQP PGGSSFALAASGSGNSANRTDFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAA NDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHATVTEGQNVAQDGSSALAYTP KHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF >gi|289774508|gb|GG745515.1| GENE 36 35749 - 36696 878 315 aa, chain - ## HITS:1 COG:BH0363 KEGG:ns NR:ns ## COG: BH0363 COG0604 # Protein_GI_number: 15612926 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus halodurans # 1 274 1 278 324 93 31.0 5e-19 MKAAVVFDLAEGPVWADFIDPQPAPGQTIIDVRAAALSHVVKARASGRHYSFDGNLPFVP GIDGVGTTPQGQRVYFAFPTAPFGSMAQQAPVALQSCLPVPDALDDVSAAAMANPGMSAW ASLVTRAQIQAGETVLINGATGSAGQLAVQIARYLGAKKIIATGRNAQTLAALDADECIH LTADDKTLSGQFSATSAAQIDVVIDYLWGHSAEVLLPALAKYTPAGRPVRYVQVGSLAGA DIALNGAVLRSAPLVLMGSGIGSLSMPQLLAATGEMLQAAVPGKFTIATTPRPLQEIAAA WPRDDSQKRTVFTLG >gi|289774508|gb|GG745515.1| GENE 37 36771 - 37229 627 152 aa, chain + ## HITS:1 COG:STM1547 KEGG:ns NR:ns ## COG: STM1547 COG1846 # Protein_GI_number: 16764892 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 148 7 154 162 136 45.0 1e-32 MQDAHNDYDITDFHGALLDIISVMNQPLRDEQILQAAGVQLEQMLFPLLVAVGRHGPVGV VELADHLGRDYTTVSRQVKKLEAQGLACKQPNRHDRRISEVTLSASGQQMIDSIAVARRR LMNQVLAQWPEDEVQALFRLTRKYADSLQQPS >gi|289774508|gb|GG745515.1| GENE 38 37273 - 38181 329 302 aa, chain - ## HITS:1 COG:BS_alsR KEGG:ns NR:ns ## COG: BS_alsR COG0583 # Protein_GI_number: 16080655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 290 1 287 302 141 29.0 1e-33 MDINQLRCFVVLGDELHFGRAARKLEMMPASLSRFIKLLEDDLGIRLLNRSTRNVSLTPE GAAFLNEAKTVIADFDALRQRFRKNSLLQKRTLRIGAIDSAAKGLLPELLNLFVRRFPEA DIHLTEDKSHKLIPRLISGWLDVVFVRPPEHIDAMLTTRFIANETCVLAVPTNHRLVSYD EVSIDDFRYEPVILPERRTRRHSHDLTMNIFKEGGSMPVIAQYAEEKQTILSFVAAGLGI ALVPASYKDMNADGVKYLALTPKKHIEGLPLSAMWHQGNNNIYVRSLLEILSDNIDELTR DL >gi|289774508|gb|GG745515.1| GENE 39 38310 - 39620 1346 436 aa, chain + ## HITS:1 COG:YPO2237 KEGG:ns NR:ns ## COG: YPO2237 COG0477 # Protein_GI_number: 16122465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 6 422 18 433 436 362 48.0 1e-100 MKNDLEKKVMRKVTLRIIPFIMLLYFIAFLDRVNIGFAALTMNQDLGFSPTVFGLGAGIF FLGYFLFEVPSNLILHKVGARIWIARVMITWGFVSGCMAFVQGTTSFYILRFLLGVAEAG FFPGIILYLSYWFPAARRAQVTAIFMAAAPLSTALGSPVSAALLEMHGFLGYAGWQWMFV LEALPALVLGVVVLFFLTDRPAKAKWLTDQERAWLENTMHAEELARAAKQSHSSAWRGLA DIRVLALALVYFGTSAGLYTLGIWSPQIIRSFGASSLEIGFLNAFPAVIGVIAMILWARH SDRTKERSWHVIGACLLAAAGLIYAGNVSTLFTVMLALTLVTVGISASKPPLWSMPTLFL SGPAAAAGIAAINSIGNLGGFVGPMMIGVIREQTGSYSWGLYFVAGLLALSALVVVILSA RANKSPTAELPHPHTH >gi|289774508|gb|GG745515.1| GENE 40 39635 - 40723 1025 362 aa, chain + ## HITS:1 COG:RSp0996 KEGG:ns NR:ns ## COG: RSp0996 COG0473 # Protein_GI_number: 17549217 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Ralstonia solanacearum # 1 348 1 349 361 498 68.0 1e-141 MRHYKIAAIPADGIGPEVISAGIEVLHALTRHDPQLKFDIETFDWGSDYYKKHGVMMPEE GLNMLKAFDAIYFGAVGAPDVPDHITLWGLRLPICQGFDQYANVRPTKILPGVTSPLRNR GPGDLDWVIVRENSEGEYSGNGGRAHRGLPEEVGTEVAIFTRVGVTRIMRYAFRLAQSRP RKLLTVVTKSNAQRHGMVMWDEIAAEVAQEFPDVQWDKMLVDAMTHRMTLHPQTLDTIVA TNLHADILSDLAGALAGSLGVAPTANIDPERRFPSMFEPIHGSAFDITGKGIANPIATFW TAVQMLEHLGERHAAALIMESIEYVCEKGILTPDVGGSANTAEVTRAVVHYIDAKADIAE TA >gi|289774508|gb|GG745515.1| GENE 41 40726 - 41985 660 419 aa, chain + ## HITS:1 COG:AGl3166 KEGG:ns NR:ns ## COG: AGl3166 COG2379 # Protein_GI_number: 15891700 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glycerate kinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 418 8 425 426 414 61.0 1e-115 MNNEQAAEILQDIFQHAVNSARAGPVTLANLPEKPRGRCVVIGAGKASAAMAAAVDAAWP DVAVSGVVVTRYGYAVPAGRIRIIEAAHPVSDAMSEVAAMLIVETLRGLTADDLVLALIS GGGSALMALPAPGLTLADKQTITRALLHSGASIKEMNLVRRHLSAVKGGKLATMAQPARI VSLIISDVPGDDPTDVASGPTVADNSAPRDALRVLQRYGIAIPKPVSERLNQPAGPVENA ATGEVRLIATPAMALAAAGLAARQHGLTPLILGDAIEGESREVAVVMAGMAKSAKQYGHP ISGPAVLLSGGETTVTVNHTPPGKGGRNTEFLLSLACALQGEHGIWAMAGDSDGIDGTED AAGAIVFPDTLARGKLSGLNAVQYLDGHDSYCYFHALNDLLITGPTLTNVNDIRAILIA >gi|289774508|gb|GG745515.1| GENE 42 42204 - 43013 377 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 265 1 263 263 149 34 5e-35 MERYETLFAQLKNRQEGAFVPFVTLGDPGPEQSLKIIDALIEGGADALELGIPFSDPLAD GPTIQGAALRAFAAGVTPAQCFEMLAAIRQKHPTIPIGLLMYANLVFSPGIDAFYAQCAR VGVDSVLVADVPVEESAPFRQAAMRHNIAPIFICPPNADDDLLRQIASYGRGYTYLLSRA GVTGAENRAALPLHHLVEKLAEYHAAPPLQGFGISAPEQVSAAIDAGAAGAISGSAIVKI IERHLDEPQTMLDELKAFVQSLKAATKTA >gi|289774508|gb|GG745515.1| GENE 43 43013 - 44206 1657 397 aa, chain - ## HITS:1 COG:ECs1833 KEGG:ns NR:ns ## COG: ECs1833 COG0133 # Protein_GI_number: 15831087 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 753 94.0 0 MSTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPAFQAEFTDLLKNYAGRPTALT KCRNLTEGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASA LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS YEKAHYMLGTAAGPHPFPTIVREFQRMIGEETKAQILEKEGRLPDAVIACVGGGSNAIGM FADFIDETNVGLIGVEPAGHGIESGEHGAPLKHGRVGIYFGMKSPMMQTADGQIEESYSI SAGLDFPSVGPQHAFLNSTGRAEYVSITDNEALDAFKALSRHEGIIPALESSHALAHALK MMRENPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI >gi|289774508|gb|GG745515.1| GENE 44 44216 - 45574 1846 452 aa, chain - ## HITS:1 COG:ZtrpC_1 KEGG:ns NR:ns ## COG: ZtrpC_1 COG0134 # Protein_GI_number: 15801916 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Escherichia coli O157:H7 EDL933 # 1 253 2 254 254 440 87.0 1e-123 MQTVLAKIVADKAIWVEARKQQQPLASFQNEVVPTQRNFYDALAGTRTAFILECKKASPS KGLIREDFDPAAIASIYKHYASAISVLCDEKYFQGSFDFLPIVSKVAPQPILCKDFTIDP YQIYLARYYQADACLLMLSVLDDEQYRQLSAVAHSLNMGVLTEVSNEEELERAIALKAKV VGINNRDLRDMSIDLNRTRQLAARLGPDVTVISESGIHTYAEVRELSHFANGFLIGSALM EQADLEAAVKRVLLGENKVCGLTRPQDAQVAWESGAIYGGLIFVPTSPRAVNDAQAKAVI AAAPLQYVGVFRNAPLDEVVARAQALGLAAVQLHGDEDQAYIDALRDALADNVRIWKALS VGETLPARTLRHVDKYLFDNGQGGSGQRFDWSLLQGQDLRNVMLAGGLGADNCVEAAKSG CAGLDFNSGVESQPGIKDASKLASVFQTLRAY >gi|289774508|gb|GG745515.1| GENE 45 45578 - 47173 2126 531 aa, chain - ## HITS:1 COG:ECs1835_2 KEGG:ns NR:ns ## COG: ECs1835_2 COG0547 # Protein_GI_number: 15831089 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 197 531 1 335 335 576 94.0 1e-164 MADILLLDNIDSFTYNLADQLRANGHNVVIYRNSVPAQALIERLGTMDNPVLMLSPGPGT PSEAGCMPELLTRMRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF AGLANPLPVARYHSLVGSNIPAGLTINANFNGMVMAVRHDADRVCGFQFHPESILTTQGA RLLEQTLAWALQKLEHTNTLQPILEKLYQAETLSQQESHQLFSAVVRGEVKPEQLAAALV SMKVRGEQPQEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRAALDELGVCFLFAPKYHTGFRHA MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG MDEVSLHAPTVVAELHNGEIKSYQLTADDFGLTPYHQAQLAGGTPEENRDILTRLLQGKG EAAHEAAVAANVAMLMRLHGHEDLKANAQQVLDVLHSGAAYDRVTALAARG >gi|289774508|gb|GG745515.1| GENE 46 47173 - 48735 2017 520 aa, chain - ## HITS:1 COG:ECs1836 KEGG:ns NR:ns ## COG: ECs1836 COG0147 # Protein_GI_number: 15831090 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 520 1 520 520 872 84.0 0 MQTSKPALELLTSDAIYRENPTALFHQLCGARPATLLLESADIDSKDDLKSLLLVDSALR ITALGDTVTIQALSANGAALLELLDGALPSGIANQRQPNGRILTFPAVSTLLDEDARLCS LSVFDAFRLLQELVTVPANEREAMFFGGLFAYDLVAGFEDLPPLQSDTACPDYCFYLAEA LLVIDHQTKHTRIQASLFTPLESEKQRLEQRLSQLRQQLNEPPAPLPVTTVAEMQCDVDQ SDEEYGAVVRKMQRAIRAGEIFQVVPSRRFSLPCPSPLAAYDVLKKSNPSPYMFFMQDND FTLFGASPESSLKYDAVSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSFVMHLVSRVVGELRQDLDVLHAYRAC MNMGTLSGAPKVRAMQLIAAAEGKRRGSYGGAVGYFTAHGDLDTCIVIRSAYVQEGIATV QAGAGIVLDSVPQSEADETRNKARAVLRAIAQAHHAKEIF >gi|289774508|gb|GG745515.1| GENE 47 49046 - 49888 804 280 aa, chain + ## HITS:1 COG:STM1721 KEGG:ns NR:ns ## COG: STM1721 COG0613 # Protein_GI_number: 16765065 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Salmonella typhimurium LT2 # 1 276 12 287 293 445 81.0 1e-125 MIYDLHSHTTASDGRLTPQELVHRAHEMRVGTLAITDHDSVAAIPAAREEIARAGLPLTL VNGVEISTLWENHEIHIVGLNIDIAHPTMTALLEEQKARRQLRGQMIAERLEKARIPGAW EGALRLADGGAVTRGHFARFLVEAGHAKNMAEVFKKYLARGKTGYVPPQWCTIKQAIDVI HHSGGKAVIAHPGRYDLSAKWLKRLLAHFSEQGGDAMEVAQCQQAPHERAQLATLAVQFG LLASQGSDFHQPCAWIELGRKLWLPAGVEGVWHSWEAAAE >gi|289774508|gb|GG745515.1| GENE 48 49905 - 50525 1026 206 aa, chain + ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 206 13 218 218 402 95.0 1e-112 MSQFFYIHPDNPQARLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLP DGHNFTLMCRDLSELSTYAFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIG MRVPSNPIAQALLETLGEPMLSTSLMLPGSDFTESDPEEIKDRLEKVVDLIIHGGFLGQQ PTTVIDLTEDTPVVLREGVGDVKPFL >gi|289774508|gb|GG745515.1| GENE 49 50547 - 51455 893 302 aa, chain - ## HITS:1 COG:RSc2507 KEGG:ns NR:ns ## COG: RSc2507 COG0697 # Protein_GI_number: 17547226 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 1 302 1 297 310 133 36.0 4e-31 MRVIDYGRLLLLAALWGASFLFMRITTPAFGAMTSAFLRVLFAAIALGLLLGVQGKWSGY QGKFISTLKLGVINSGLPFLMYCLAAQWLPAGYSATLNATAPMMGMLIGALCFAEPLTLR KGGGALLGAIGVAVIARPTSSLSAALLLPGIGACLIATACYGLAGFLTRSWIQQRGGLEA ERVALGSQVGATLFLLPFFLWSGWYGPVIDWRQSLPWIAIVMLGVVCTAAGYILYFRLIA DIGPLRSLSVTFLIPPFAALWGYLCLGETIQKGLILGALLIGLALWLIVVPSGRKRGVPG GA >gi|289774508|gb|GG745515.1| GENE 50 51567 - 52466 711 299 aa, chain + ## HITS:1 COG:AGc3765 KEGG:ns NR:ns ## COG: AGc3765 COG0583 # Protein_GI_number: 15889362 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 289 4 291 300 239 45.0 4e-63 MKLPPLNALRCFEAAARLLSLKQAASELCVTASAVSQQIARLEEALNTPLFIRTPRQLQL TEVGEIYLRAVQPAFLQIAAATQRLQVPAGPEKVTLSCTSGFAIQWLLPRLADFERRYPK IEIQIGTTNRRVDLLSEGIDFAVRHGVGGWPELQAYRLLDDDLIPVCSPQLIAPRRSLAD AGDLLQYPLLHDEHREDWALWCEAVGLEPDRARRGPVFTDSNGVTEAAFAGMGMALLRRS FIASALTQGRLVNPLAQPIACPLAYHLVYHETALLAPANRCFRDWLLGQRPAVVEEGAQ >gi|289774508|gb|GG745515.1| GENE 51 52747 - 53649 1300 300 aa, chain + ## HITS:1 COG:ECs1841 KEGG:ns NR:ns ## COG: ECs1841 COG1187 # Protein_GI_number: 15831095 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 289 1 289 290 500 93.0 1e-141 MSEKLQKVLARAGHGSRREIEAKIEAGRVSVDGKIATLGDRVEIVPGLKIRIDGHLISVK ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDDDKLRQLSRGVQLEDGPAAFKTIKFTGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDILLPKGLPRGGYTELDLAQTNYL RELVELTPETSSKVAVEKDRRRMKANQIRRAVKRHSQTSANPRQGNNSNRRSSTRNKTNG >gi|289774508|gb|GG745515.1| GENE 52 53710 - 54300 913 196 aa, chain - ## HITS:1 COG:ECs1842 KEGG:ns NR:ns ## COG: ECs1842 COG2109 # Protein_GI_number: 15831096 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 352 86.0 2e-97 MSDERYRERQQRLKDKVDARVAAAQDERGIVMVFTGNGKGKTTAAFGTATRAVGHGKKVG VIQFIKGTWPNGERNLLEPHGVEFQVMATGFTWNTQDRDSDTAACLAVWEHARRMLADDQ LDLVLLDELTYMVAYDYLPLESVLSALRERPAHQSVIITGRGCHRDIIELADTVSELRPV KHAFDAGIKAQMGIDY >gi|289774508|gb|GG745515.1| GENE 53 54297 - 55097 896 266 aa, chain - ## HITS:1 COG:yciK KEGG:ns NR:ns ## COG: yciK COG1028 # Protein_GI_number: 16129232 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 14 266 1 252 252 419 83.0 1e-117 MKRDREPIAQGVAVHYQPQRHLLKDRIILVTGASDGIGREAALTYARYSASVILLGRNDE KLRAVAQEIEREGGLPARWFTLDLLTCTPQACQQLAQQISMHYPRLDGVLHNAGLLGDIC PMDEQKPEVWQQVMQVNVNGTFMLTQALLPLLLRSDAGSLVFTSSSVGRQGRANWGAYAV SKFATEGMMQVLADEYQSRHLRVNCINPGGTRTGMRASAFPTEDPLKLKTPADIMPVYLW LMGDDSRRKTGMTFDAQPGRKPGIAQ >gi|289774508|gb|GG745515.1| GENE 54 55277 - 56359 1255 360 aa, chain + ## HITS:1 COG:ECs1844 KEGG:ns NR:ns ## COG: ECs1844 COG0616 # Protein_GI_number: 15831098 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli O157:H7 # 13 360 1 349 349 499 83.0 1e-141 MQQRQCFTQGENVELLAQYGLFLAKIATVVVAIAVIAAIIVNLAQRKKQRGELRVTNLSE HYKEMKESLAVALLDGPQQKQWHKAQKKKQKQEAKAAKARAKLGNVEPEGKPRAWVLDFK GSMDAHEVNSLREEITAVLAAAKARDQVVIRLESPGGVVHGYGLAASQLQRLRDKQIPLT VAVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQY KRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMRPGLDIEQVATGEHWYGVQALEKG LVDAVETSDELLLGLMESHEVIGVRYQQRKKMLDRFTGSAAESADRLLLRWWQRGQKPLM >gi|289774508|gb|GG745515.1| GENE 55 56407 - 56658 414 83 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3045 NR:ns ## KEGG: Kvar_3045 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 83 1 83 83 160 100.0 2e-38 MQGTTQPIDRQTLLEKANKLIREHEDTLAGIEATDVVQRNNVLVFSGEFYLDEQGLPTPK STAVFNMFKYLAHELSDKYHLVD >gi|289774508|gb|GG745515.1| GENE 56 57065 - 59662 3066 865 aa, chain + ## HITS:1 COG:STM1714_1 KEGG:ns NR:ns ## COG: STM1714_1 COG0550 # Protein_GI_number: 16765058 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Salmonella typhimurium LT2 # 1 592 1 592 592 1084 91.0 0 MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSTDSTATKGAKKPK KDERGALVNRMGVDPWHDWNAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDALPLQVTH KDDKPFRPVSRDETMAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYISDNFGKKYLPESANQYASKEN SQEAHEAIRPSDVSVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGDF KLKARGRTLRFDGWTKVMPALRKGDEDRTLPVVKQGDRLSLVELTPAQHFTKPPARFSEA SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMNY DFTAQMEDRLDQVANHQAEWKEVLNHFFGDFTTQLETAEKDPEEGGMQPNPMVLTSIDCP TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV ASEKEGKATGWSAFFIDGKWTEAKK >gi|289774508|gb|GG745515.1| GENE 57 60004 - 60978 1142 324 aa, chain + ## HITS:1 COG:STM1713 KEGG:ns NR:ns ## COG: STM1713 COG0583 # Protein_GI_number: 16765057 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 324 1 324 324 624 95.0 1e-179 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYVATTHTQARYALPGVIKGFIERYP RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAA KGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV GVIASMAVDPVSDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DTAVALRSNEDIEAMFKDIKLPEK >gi|289774508|gb|GG745515.1| GENE 58 61224 - 61391 186 55 aa, chain + ## HITS:1 COG:no KEGG:Kvar_3042 NR:ns ## KEGG: Kvar_3042 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 55 1 55 55 89 100.0 4e-17 MISNIDYMKLAMSYENDKTEIDPVLRSRVWGVVLVGLAMFWSIIALTICNIWIVS >gi|289774508|gb|GG745515.1| GENE 59 61782 - 64454 3337 890 aa, chain + ## HITS:1 COG:acnA KEGG:ns NR:ns ## COG: acnA COG1048 # Protein_GI_number: 16129237 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 890 1 890 891 1592 88.0 0 MSSTLREASKDTLLVNEKTWHYYSLPLAEKQLGDLSRLPKSLKVLMENLLRWQDGDSVTE EDICALAGWLQQAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPL SPVDLVIDHSVTVDRFGDDEAFEDNVRLEMERNHERYAFLRWGQQAFSRFSVVPPGTGIC HQVNLEYLGRAVWSEEVNGKWMAWPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQ PVSMLIPDVVGFKLSGKLREGITATDLVLTVTQMLRQHGVVGKFVEFYGDGLDTLPLADR ATIANMAPEYGATCGFFPIDDVTLSYMRLSGRSEEQVALVEAYAKAQGMWRQPGDEPVFT STLALDMGSVEASLAGPKRPQDRVALGDVPKAFAASGELEVNHPQRQRQPVDYTLNGHHY SLPDGAVAIAAITSCTNTSNPSVLMAAGLLAKKAVERGLQPQPWVKASLAPGSKVVSDYL AHAGLTPYLDQLGFNLVGYGCTTCIGNSGPLPEPIEEAIKKGDLTVGAVLSGNRNFEGRI HPLVKTNWLASPPLVVAYALAGNMNIDLTREPLGQGSDGEPVYLKDIWPSGEEIARAVEQ VSTEMFRKEYAEVFSGTEEWKAIKVEASDTYDWQEDSTYIRLSPFFDEMGVEPLPVEDIH GARILAMLGDSVTTDHISPAGSIKADSPAGRYLQEHGVARRDFNSYGSRRGNHEVMMRGT FANIRIRNEMVPGVEGGMTRHLPDREPVAIYDAAMQYKAEGIPLAVIAGKEYGSGSSRDW AAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLQLTGEERIDISNLQS LQPGATVPVTLTRADGSQEVIPCRCRIDTATELTYYRNDGILHYVIRNML >gi|289774508|gb|GG745515.1| GENE 60 64501 - 65103 763 200 aa, chain - ## HITS:1 COG:ECs1850 KEGG:ns NR:ns ## COG: ECs1850 COG0807 # Protein_GI_number: 15831104 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Escherichia coli O157:H7 # 1 195 1 195 196 381 94.0 1e-106 MQLKRVAEAKLPTPWGDFLMVGFEELATGQDHVALVYGDISGQSPVLARVHSECLTGDAL FSLRCDCGFQLEAALSHIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ LGFAADERDFTLCADMFKLLNVEQVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPKNA HYLDTKAAKMGHLLNSKPAE >gi|289774508|gb|GG745515.1| GENE 61 65267 - 66034 711 255 aa, chain + ## HITS:1 COG:STM1710 KEGG:ns NR:ns ## COG: STM1710 COG0671 # Protein_GI_number: 16765054 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 254 1 254 254 332 74.0 5e-91 MLLIARRTALAAALLLVMPVTVWLSGWLWQPGLPVAMLKTLWWVTETVTQPWGIITHVAL CGWFLWCLRYRLRAALILFLILAAAILVGQGVKSWVKARVQEPRPFVIWLENSRQVPVTQ FYALKRKERAKLVHAQLAQAQDIPPFLRKHWQKETGFAFPSGHTMFAASWALLAAGLLWP RRRWGTVAVLLVWATAVMGSRLALGMHWPLDLIVATLISWLLVTVACWLTQRLCGPLSPP GEEAQDIKKRMPEAE >gi|289774508|gb|GG745515.1| GENE 62 66171 - 66479 202 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein [Haemophilus influenzae R2866] # 1 85 2 86 97 82 38 1e-14 MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEFRISTLLAVLFAAGFAIGWLIC GLFWLRVRVSLARAERKIKRLEHQIAPVSPAAVDAGVPAVKE >gi|289774508|gb|GG745515.1| GENE 63 66486 - 67655 1484 389 aa, chain + ## HITS:1 COG:ECs1853 KEGG:ns NR:ns ## COG: ECs1853 COG2956 # Protein_GI_number: 15831107 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Escherichia coli O157:H7 # 10 388 10 388 389 634 86.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQSKQDDANRLSRDYVAGVNFLLSNQQDKAVDLFLD MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAA GLYDRAEDMFKQLVDETDFRLSALQQLLQIYQATSDWQSAIEVAERLVKLGKEKHRGEIA NFWCELALQQMAANDLDKAMALLKKGAAADRNSARVSIMMGRVWMEKGDYAKAVESLERV IDQDKELVGETLEMLQTCYQQLGKAEEWEVFLRRCVDENTGATAELMLAQILEQREGVEA AQNYVTRQLERHPTMRVFHKLMDYHLNEAEEGRAKESLGVLRNMVGEQVRSKPRYRCQKC GFTAHTLYWHCPSCRSWATIKPIRGLDGQ >gi|289774508|gb|GG745515.1| GENE 64 67845 - 68582 669 245 aa, chain + ## HITS:1 COG:pyrF KEGG:ns NR:ns ## COG: pyrF COG0284 # Protein_GI_number: 16129242 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli K12 # 1 245 1 245 245 394 85.0 1e-110 MTSTAITSSRAVTSSPVVVALDYDNRDKALAFVDRIDPRDCRLKVGKEMFTLLGPQFVSD LHQRGFEVFLDLKFHDIPNTTARAVAAAAELGVWMVNVHASGGARMMTAAREALLPFGKE APLLIAVTVLTSMEASDLQDLGITLSPADYAAKLAALTQRCGLDGVVCSAQEAVRFKQEL GQAFKLVTPGIRPQGSEAGDQRRIMTPEQAQAAGVDYMVIGRPVTQSADPAATLRAINVS LSKEA >gi|289774508|gb|GG745515.1| GENE 65 68582 - 68908 446 108 aa, chain + ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 165 91.0 2e-41 MSDSNSRLVYSTETGRIDEAKPAPVRPKGDGIVRIQRQTSGRKGKGVCLISGIDADDAAL NALAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG >gi|289774508|gb|GG745515.1| GENE 66 69038 - 69259 204 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|194433800|ref|ZP_03066074.1| ## NR: gi|194433800|ref|ZP_03066074.1| osmotically inducible lipoprotein B [Shigella dysenteriae 1012] osmotically inducible lipoprotein B [Shigella dysenteriae 1012] # 2 73 1 72 72 65 84.0 1e-09 MMTSTSKKMAAVVLAVTVAMSLSACSNMSKRDRNTAIGAGAGAIGGAVLTDGSALGTLGG AAVGGIIGHQVGK >gi|289774508|gb|GG745515.1| GENE 67 69531 - 70280 1016 249 aa, chain - ## HITS:1 COG:STM1704 KEGG:ns NR:ns ## COG: STM1704 COG1349 # Protein_GI_number: 16765048 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 246 1 246 250 385 78.0 1e-107 MNARQQSILQVVIDKGRMSVADLAKMTGVSEVTIRQDLNLLEKQSYLRRTHGYAVPLDSE DVETRMMTHFAIKRELASRAAALVSAGETVFIENGSSNALLARTLAERGDITIITVSSYI AHLLKETPGEVILLGGIYQKRSESMVGPLTRQFIQQVHFSKAFIGIDGWQAETGFTGRDM MRADVVNAVLEKHCEAIILSDSSKFSAVHPYPLGPAGRFNRVITDDRLPAACRDQLLHSG LTVDIVPYV >gi|289774508|gb|GG745515.1| GENE 68 70352 - 70531 283 59 aa, chain - ## HITS:1 COG:no KEGG:Kvar_3032 NR:ns ## KEGG: Kvar_3032 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 59 1 59 59 82 100.0 7e-15 MSDVNAHLLAQRIDTVLDILVAGDYHSAIHNLEILKAELLALAADDAEQKNQPKAPWEI >gi|289774508|gb|GG745515.1| GENE 69 70690 - 72624 2560 644 aa, chain - ## HITS:1 COG:ECs1859 KEGG:ns NR:ns ## COG: ECs1859 COG4776 # Protein_GI_number: 15831113 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Escherichia coli O157:H7 # 1 642 1 642 644 1175 90.0 0 MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYAESTADGKLLLTVAIADPTAWIAEGSK LDKAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIEF FAATIESKAKLAYDDVSDWLEGRGSWQPGSDAIAQQITLLKDVCQRRSEWRQTHALVFKD RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDDATVQMAERRRLNRM AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV >gi|289774508|gb|GG745515.1| GENE 70 72706 - 73863 968 385 aa, chain - ## HITS:1 COG:yciW_1 KEGG:ns NR:ns ## COG: yciW_1 COG4950 # Protein_GI_number: 16129248 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 205 27 231 236 264 66.0 2e-70 MEPHRVNGKNHWYHETQSTICPVDVLPLVPEAAHVEDRFLLDLTLPEAWLHIHAGWLHPA RQLAERLFPDQVAVSRLQTFTAYDRLSTALTVAQVYGVQRLCNHYAARLAPLPGPDSSRE SNRRLAQITQYARQLASSPSVINALSRSQLDEVGLTSRDIILINQIIGFVGFQARAIAVL QAALGYPVRWIPGMPQQEEAPAELFTAPPGEWQSDLEDPDLQYADDERQRRIAGWQSLPG LGELAPLLACDPPLFTPLETLIRQLSTDDTFGPQVALLAARTNGSPTCFDAWLPHWQGEE EFASHLREGDQALHHWLQQHPQSRSLVTAVQLLTRSPDRFSAAQLTPLAEYGLSAEQAID LLTWSGLCGWMNRLKIALGNVRQQT >gi|289774508|gb|GG745515.1| GENE 71 74054 - 74842 1125 262 aa, chain - ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 478 93.0 1e-135 MGFLSGKRILITGVASKLSIAYGIAQAMHREGAELAFTYQNEKLKGRVEEFAAALGSDIV LPCDVAEDESITALFTELEKVWPKFDGFVHSIGFAPADQLDGDYVDVVTRDGFKIAHDIS AYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSNLSAGI SGEVVHVDGGFNIAAMNELELK >gi|289774508|gb|GG745515.1| GENE 72 75042 - 75584 291 180 aa, chain - ## HITS:1 COG:ydjR KEGG:ns NR:ns ## COG: ydjR COG3758 # Protein_GI_number: 16129696 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 4 177 24 200 212 106 35.0 3e-23 MIFFFDIATLPITPWKNGAGATREIIAVPSTDAPFLWRASIATLQADGPFSPFPGVDRVI TLLAGQPLRLCGEDIDHPLTLWQPWAFPGEWALSSVGIVEPGLDFNIMTQRGRASARVKV INDQQRPATEGVAYVLQGEWDLAGQRSAAGSGLCWRGESPGELQPLSANGCLLLAEIALK >gi|289774508|gb|GG745515.1| GENE 73 75795 - 76640 856 281 aa, chain + ## HITS:1 COG:mll6987 KEGG:ns NR:ns ## COG: mll6987 COG0834 # Protein_GI_number: 13475818 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Mesorhizobium loti # 32 281 29 281 283 227 46.0 2e-59 MQQRITFRQACLVTLFSGLLLSGGSTYAKEWKSITIATEGGYEPWNLTLPGGKLSGFEPE LMANLCQRMQIECKLVVQNWDGMIAGLNAGKYDVIMDAIVVTPERSKVVAFTQAYAATPA SFIAVKGSLLPPSPTVKLHDDEKEIQAAIAPLRAALKGKTIGIASGTVYTPFIDKYFKDI ADIREYNNSADAILDLQAERIDAVFDDITFANTTLSRPENNNLALSGPLMSGPIWGGGEA MGVRLTDTDLKAKLDSAIQAALADGTVKKLSEKWFKSDVTP >gi|289774508|gb|GG745515.1| GENE 74 76652 - 77371 838 239 aa, chain + ## HITS:1 COG:mll6986 KEGG:ns NR:ns ## COG: mll6986 COG4215 # Protein_GI_number: 13475817 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Mesorhizobium loti # 2 231 1 227 233 184 45.0 1e-46 MLNLLSFGENGWGTLILSATLTTLLLSLAALAVGAGVGGVIAAAKLSRHAPARWFGAAWS VVFRGIPELLVIYLFYFGGSGMISWVGRLFGADGFIEVPPFLIGALAIGLISSSYQAEVY RAARLALMPGEVEAATAIGMPRWRILQRILLPQIIRYSLPGLSNVWQMSLKDSALVSVTG IVELMRASQIAAGSTRDYFLFYLIGGGCYLILTLLSNRAFTRAESHLNRAWLRRSAAQA >gi|289774508|gb|GG745515.1| GENE 75 77381 - 78112 815 243 aa, chain + ## HITS:1 COG:AGpT65 KEGG:ns NR:ns ## COG: AGpT65 COG4160 # Protein_GI_number: 16119837 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 228 1 227 241 192 48.0 4e-49 MFIDFAFLGETLLKLGAALPVTLGLFICSFILGGALALGVLALRMSHWPLASGFAKGYIL IFRGSPLLIQLFLIYYGLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGL LAIPPGQIEAGQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDV TGVAQQIIQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQNPATVSLKPIT KGE >gi|289774508|gb|GG745515.1| GENE 76 78114 - 78908 211 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 230 1 235 563 85 27 9e-16 MLDSRPVTLSVSDIHKSFGSLDVLKGITIQARQGDVISILGASGSGKSTLLRCINLLETP DAGVVSVGGETIEMKHHARGHRLAANPRQIERLRSRLGMVFQSFNLWSHMTVLQNVIEGP HYVLKRDKRTCIEQAEQLLERVGMLNRKDFYPAQLSGGQQQRVAIARALAMEPDVMLFDE PTSALDPELVGEVLKVMRSLAEEGRTMLVVTHELGFARHVSNRVVFMHQGTIDCDGAPEA LFGTQGSARFKQFISSHQQPGQVV >gi|289774508|gb|GG745515.1| GENE 77 78905 - 80404 1377 499 aa, chain + ## HITS:1 COG:PA5093 KEGG:ns NR:ns ## COG: PA5093 COG2986 # Protein_GI_number: 15600286 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Pseudomonas aeruginosa # 4 490 7 493 510 607 68.0 1e-173 MNIIQWGDAPIRWQEVACVARGEAILSLSESAWARIEQGRVIVQHIVSAGQVAYGINTGL GALCNITLPEAQLHQLSRNTLLSHACGVGPLLEVAPTRAIMCAAVANFSHGKSGISAGIV QQLLMFLQHGVTPQVPSQGSVGYLTHMAHIGLALMGVGDVLWQGRTWSAAEVLSQLNLQP IAPGAKEGLSLVNGTPCMTGLACLALDDAERLMNWADVTGAMSFEALRGQLVAFDAEILA LKASPGIQTSGQRLRELLAGSRLLAESEGLRTQDALSLRSMPQVHGACRDQFSHAQTQIN IELNACTDNPLILGTLEQWRVVSQAHPHGESVAMACDLLAIAMAELGAIAERRLDRLVNP LVSGLPAFLVARPGVNSGMMIAQYVAASLCAENKQLAQPAVLDNFVTSALQEDHLSLGTS AALKLQRLLGNLYQILGIEYLLAAQGLDFHEPQTLAAGTRRARDLLRQSVPGWEEDRWLA PDIASAVAILKRNAGHAPA >gi|289774508|gb|GG745515.1| GENE 78 80433 - 81254 440 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 256 3 263 329 174 35 2e-42 RKSEMVETLLEVRQLSKTFRYRTGWFHRQTVEAVKPLSFTLRERQTLAIIGENGSGKSTL AKMLAGMVEPTSGELLIDDHPLTFGDYSYRSQKIRMIFQDPSTSLNPRQRISQILDFPLR LNTDLDAEARQKQIIDTLRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIVCDE ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHNGEVVERGSTA DVLASPLHDLTRRLIAGHFGEALTADAWRKDGK >gi|289774508|gb|GG745515.1| GENE 79 81244 - 82236 479 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 13 321 28 324 329 189 37 7e-47 MPLLDIRHLTIEFRTNEGWVKAVDRVSLTLTEGEIRGLVGESGSGKSLIAKAICGVTKDN WRVTADRMRFDDIDLLRLSNRERRKLIGHNVSMIFQEPQSCLDPSERIGQQLIQSIPGWT YKGRWWQRLGWRKRRAIELLHRVGIKDHKDAMRSFPYQLTEGECQKVMIAIALANQPRLL IADEPTNAMEPTTQAQIIRLLTRLNQNNNTTILLISHDLQMLSKWADKINVMYCGQTVES GPSEELVTLPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPY AQRECIETPRLTGARNHLYACHFPLNMEKE >gi|289774508|gb|GG745515.1| GENE 80 82236 - 83126 1429 296 aa, chain - ## HITS:1 COG:STM1694 KEGG:ns NR:ns ## COG: STM1694 COG4171 # Protein_GI_number: 16765037 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 496 91.0 1e-140 MPYDSVYLEKRPPGALRTVWRKFYGDTTAMIGLYGCAGLLLLCVFGGWFAPYGIDQQFLG YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLGATLFGLVLGVIA GSTHGLRSAVMNHILDTLLSIPSLLLAIIVVAFAGPHLSHAMFAVWLALLPRMVRSVYSL VHDELEKEYIIAARLDGASTLNILLFAILPNIASGLVTEITRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMLSVLLVNLLGDGIRRAIIAGVQ >gi|289774508|gb|GG745515.1| GENE 81 83486 - 83971 -157 161 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVLQFRKDIPNCFDFLITQSAIFNGCCETYVRAPKALNWVHINDPSIGAKTERTLHQPK HLTSDNSSPHAIKKVKPVRFSGLINNHVPQHRRYMVIEVPSVNLDFHKTFGDAVILFPVI ESLFNGERFDFFLFLQNCLPSRIESFCQPGPELLSTFASLR >gi|289774508|gb|GG745515.1| GENE 82 84275 - 84490 64 71 aa, chain + ## HITS:1 COG:Z1835 KEGG:ns NR:ns ## COG: Z1835 COG0582 # Protein_GI_number: 15801304 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 4 67 339 402 416 68 51.0 2e-12 MKPWSLHDLRRTVATRLSELGAPPHVVEKLLGHHMAGVMARYNLHDYLDDQRHWLAVWQD HLEKLVGQPLV >gi|289774508|gb|GG745515.1| GENE 83 84958 - 85266 220 102 aa, chain - ## HITS:1 COG:no KEGG:KPK_3136 NR:ns ## KEGG: KPK_3136 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 102 1 102 102 194 100.0 1e-48 MSLKHRLPELEASIDPAALRAAADEYSDLLLTLCLCMKMAGPTRANVRACASELKKRLTT WHSHKELNAILSSWDPVGYVLGLRREANDNARAAGDPVDVFV >gi|289774508|gb|GG745515.1| GENE 84 85263 - 86045 320 260 aa, chain - ## HITS:1 COG:no KEGG:E2348C_2779 NR:ns ## KEGG: E2348C_2779 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 38 256 1 233 237 232 56.0 1e-59 MPPHPSQALREGKADGCQPGKICQCYWPHEWAVWSGIMKERGMIFNADMVRAILDGRKTQ TRLPIKWKQTRFTEIGEREDGSKWPWSEDAEHACDFWHPCPFGAVGDRIWVRETFQGPLF DYDLMDNYCKDPTPFEKPEFCVYKADGVPAPEFYDADDELHCCWRPSIHMPRWASRILLE ITDVRVERLNAINEHDAQAEGVAKLRGGFWKHYQPGWTQHQLSARGSFVTLWKSIYGDES WNSNPWVWVIKFKRIEELTA >gi|289774508|gb|GG745515.1| GENE 85 86064 - 86675 58 203 aa, chain - ## HITS:1 COG:no KEGG:Z1454 NR:ns ## KEGG: Z1454 # Name: not_defined # Def: putative DNA N-6-adenine-methyltransferase of bacteriophage BP-933W # Organism: E.coli_O157 # Pathway: not_defined # 7 170 5 168 175 208 59.0 1e-52 MTDFGGSKTPKNERDYWQTPIEIFNALDREFGFWLDAAASESNALCAHYLTELDDSLNSE WTSCGSIWCNPPYSDIGPWVEKAAEQSRAQSQAVVMLLPADISTGWFISAMQSADELRLI TGGRVQFVPASVTGKRQSNPKGSLLFIWRPYITPRHIITSISLAELKRIGNWRLHDARRK RKRSPRPGSSLRRRDNQSDERKA >gi|289774508|gb|GG745515.1| GENE 86 86704 - 87324 242 206 aa, chain - ## HITS:1 COG:no KEGG:LHK_01497 NR:ns ## KEGG: LHK_01497 # Name: not_defined # Def: exonuclease # Organism: L.hongkongensis # Pathway: not_defined # 1 200 1 199 203 286 71.0 5e-76 MEQRTPEWFAARCGKVTASRLADVMARTKSGYAASRQNYMAELICQRLTGKLEEGFSNAA MIRGTELEPVAREMYALNEFDAEITEVGLIDHPTIPGFAASPDGLVNGDGLIEIKCPNTW THLETLKTGEPKRQYLLQMHAQMMCTGRKWCDFVSFDDRLPPDLAYFKKRIHFDEALANE IQSEVKKFLEELEKEISSIKNHDHAA >gi|289774508|gb|GG745515.1| GENE 87 87324 - 88070 503 248 aa, chain - ## HITS:1 COG:no KEGG:LHK_01498 NR:ns ## KEGG: LHK_01498 # Name: not_defined # Def: recombination protein bet # Organism: L.hongkongensis # Pathway: not_defined # 1 227 1 233 262 269 60.0 8e-71 MSTALSTMAGKLASRLGMDAGTDLMNTLKNTAFKGGNVTDEQFTALLIVANQYGLNPWTK EIYAFPDKGGIVPVVGVDGWARIINEHPQFDGMEFAYDKEEGACTCKIYRKDRTHPTIVT EYMGECKRNTQPWQSHPTRMLRHKTLIQCARLAFGFAGIFDQDEAERVIEGSTTEVHVGH ESDGRRPELIAKGESAARLGTVKYQEFWVALSAEEKQVIGAVEKRRMYDMSLAVDNAEPV DAAAPEDK >gi|289774508|gb|GG745515.1| GENE 88 88087 - 88371 286 94 aa, chain - ## HITS:1 COG:no KEGG:ECL_01296 NR:ns ## KEGG: ECL_01296 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 94 1 94 94 148 77.0 5e-35 MNAYRAYDVIEERKWAEQTLTEEKQKWVDDRAQEIIDALPKEPSGLFRFSVPMDKSPYEG LRSDSAGEAYNDFISAVAYAQAEYDWDHRTGCPF >gi|289774508|gb|GG745515.1| GENE 89 88452 - 88658 118 68 aa, chain - ## HITS:1 COG:no KEGG:ECP_1143 NR:ns ## KEGG: ECP_1143 # Name: not_defined # Def: FtsZ inhibitor protein; Reviewed; region: kil; PRK11354 # Organism: E.coli_536 # Pathway: not_defined # 1 67 61 127 128 105 80.0 6e-22 MVSHHYGTQTVNRGAVLPGMLVKHRESTWTASANKRGRLYLHRGIERTYTTDLLVEVYLN GLGQGLSR >gi|289774508|gb|GG745515.1| GENE 90 89095 - 89298 289 67 aa, chain + ## HITS:1 COG:no KEGG:SARI_02671 NR:ns ## KEGG: SARI_02671 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 67 1 67 67 69 70.0 4e-11 MSNEDEFFAEMHPQIAQVIGIAVMQLLVEKREPSREALIEMIQVLWLGDQPDLAVELALD VLMLREE >gi|289774508|gb|GG745515.1| GENE 91 89328 - 89810 -191 160 aa, chain - ## HITS:1 COG:no KEGG:ECED1_2552 NR:ns ## KEGG: ECED1_2552 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 4 146 59 196 206 155 69.0 6e-37 MDRISREELEARLSANKAEMESIASSIRADMALARENTNVQFANLSSAINSISSKIDGKM DSVDGEMKAITGKFDGIQGQITGLNTAISGIQSGISTRLAIFSVIIAVIVALPGIISSFK DSPAKSDDNPSPLIIQMPAQQQNQQPAPQNQQKASPNQHK >gi|289774508|gb|GG745515.1| GENE 92 89972 - 90406 100 144 aa, chain - ## HITS:1 COG:no KEGG:ECED1_2551 NR:ns ## KEGG: ECED1_2551 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 144 19 162 162 195 64.0 5e-49 MQVNLERISFITPFSDSEDQTQPKLSFECVNFPAQFSINFRVGMVGLKPNTRYQLGLFVI PAHLFIKEGQEFQLPDGTQESVSVNIDTKDSNMATGASGQVVITLNEMRLPGKGLYSVTG VLHANDSIKTVLHKNESFFTVDKL >gi|289774508|gb|GG745515.1| GENE 93 90626 - 91042 264 138 aa, chain - ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 138 95 231 231 145 52.0 2e-35 MDLAVSAGPGIVNQEFVEILHSVEYAPAEARHMFDGRKAENIRIINVRGDSMSGTIEPGD LLFVDISVKSFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYAAWDPIEKDEMNRV FVFGKVIGSMPQTYRKHG >gi|289774508|gb|GG745515.1| GENE 94 91420 - 91653 126 77 aa, chain + ## HITS:1 COG:no KEGG:ECL_01302 NR:ns ## KEGG: ECL_01302 # Name: not_defined # Def: predicted antirepressor protein Cro # Organism: E.cloacae # Pathway: not_defined # 1 77 1 77 77 117 84.0 2e-25 MNPTIKTAINIVGSQKKLGEACDVSQQAVYKWLHNKAKVSPEHVNSIVNATNGEVQAHQI RPDLPKLFPSPKGVPAA >gi|289774508|gb|GG745515.1| GENE 95 91693 - 92013 168 106 aa, chain + ## HITS:1 COG:no KEGG:KPK_4174 NR:ns ## KEGG: KPK_4174 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 106 1 106 106 196 100.0 3e-49 MENAIARKLEPPILNPIEIEGILLNRLLSIGQKVFAEMRGVSESTISRRKSEGYYAEMAK EISALGLQVVPPEAVVVSRHYLQSVETLADIGLRAERCRPGPLGWD >gi|289774508|gb|GG745515.1| GENE 96 92100 - 92246 134 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262043739|ref|ZP_06016844.1| ## NR: gi|262043739|ref|ZP_06016844.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] # 1 48 1 48 48 72 97.0 1e-11 MPKSNRFYQAQTHKNVTRDRFIRSVNPVVGMKMRAILEELKRKEEGRE >gi|289774508|gb|GG745515.1| GENE 97 92287 - 93138 445 283 aa, chain + ## HITS:1 COG:no KEGG:ESA_03084 NR:ns ## KEGG: ESA_03084 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 283 16 298 298 325 59.0 1e-87 MEKPQPSGQGLVFLHRKVRELPFYKTDSEAVHLWIHLIMEVNSADGMVTTEFGEYPVSRG QVITGRHTLSKDTGIAPDRVKYLLNKFAKMGMITTLANKKFTLLTVTKYDDYQQFFVPTE CQQSANANPVTTLRTGEVVPTECQQSATNNILNNISSTDVEESASASPKSEPKKQSLSCE QVVDVYHQVLPEAQGIRVLTDKRRNLIRSFWQKANKITRQLDGHSFTLADWESYLSYIAS NCRWMLENRPDQRTGKTWRRKSLEYFLNVDVYAKTREGACDDL >gi|289774508|gb|GG745515.1| GENE 98 93128 - 94558 770 476 aa, chain + ## HITS:1 COG:ECs1190 KEGG:ns NR:ns ## COG: ECs1190 COG0305 # Protein_GI_number: 15830444 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli O157:H7 # 1 476 6 483 483 635 66.0 0 MTSDFMTPPHSIEAEQSVLGGLLLDDDNSERTQKVLSILKPESFYARQHQVIFAEMRQMY RDHKPVDLLTLFDALDSKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGI EKTTKAIELLYARNGMTAEQKFDAIQGLFTEITEHVKTGRRTGLRTFYDAVTDWSAEFDE RLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGVNCATVENE PALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYHGDWNSDLKKATGVMGALI DTNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITK GLKTLAKELDCVVVLLTQLNRELEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDE NANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEEKPTKRGGF >gi|289774508|gb|GG745515.1| GENE 99 94558 - 94860 214 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290512995|ref|ZP_06552359.1| ## NR: gi|290512995|ref|ZP_06552359.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 100 1 100 100 194 100.0 3e-48 MKKNSGKQVVLNYVSQHLGCTFQDIRRGTGLDSSVVNSSLWQMNKDGQVKREGECRSYRY TLIDTTAVTESDPSAQYRQRPGGVNPMTNLFNQCLAGVRK >gi|289774508|gb|GG745515.1| GENE 100 94857 - 95138 290 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290512996|ref|ZP_06552360.1| ## NR: gi|290512996|ref|ZP_06552360.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 93 8 100 100 155 100.0 1e-36 MNIETVNELIASLESAGELSIREQKFLKLAKAFKQLAAENVALKATSDDRRMFIMNGVQL GYIKVPTVETDPALETIRIAVSPQETTPATIAS >gi|289774508|gb|GG745515.1| GENE 101 95278 - 95475 117 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MITGTTNYDEVPDVRCTLCGGYYKADEPESHDCDEARYEIECEICGFKSTDPDGAHYCCE DNPDD >gi|289774508|gb|GG745515.1| GENE 102 95468 - 95773 213 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290512997|ref|ZP_06552361.1| ## NR: gi|290512997|ref|ZP_06552361.1| predicted protein [Klebsiella sp. 1_1_55] predicted protein [Klebsiella sp. 1_1_55] # 1 101 34 134 134 181 100.0 2e-44 MTDITELAQREKFEAWFKSSFHPDKTGPYIKDQLYFAWKAAGAELVEALEKTQHRITELE SRTVKLPESFKLAKSSSGLMYYFADEVDAAIIAAGIKVEDE >gi|289774508|gb|GG745515.1| GENE 103 95773 - 96066 308 97 aa, chain + ## HITS:1 COG:no KEGG:SeD_A0607 NR:ns ## KEGG: SeD_A0607 # Name: not_defined # Def: GP43 # Organism: S.enterica_Dublin # Pathway: not_defined # 1 97 1 97 97 143 69.0 2e-33 MWRGADRGRSQMILTEYRYDPKSKDSKSIYLVRHNSRIHQTVLEQHLTIERDSFGRFIPT IELKDFPEGLSDRESMLKLADWLHRLGVAIEDNWSQP >gi|289774508|gb|GG745515.1| GENE 104 96063 - 96383 160 106 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1120 NR:ns ## KEGG: ECO111_1120 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 35 106 142 213 331 100 72.0 2e-20 MTKSTITRERLEWLSQISCRDDIEDIGGDEIRELASMALAAMDSESGCLPLDYLQGHKDG LEWAAQLAEANHPETGDWLYDDPIELAKAIRKGPDMPPAQPVADSE >gi|289774508|gb|GG745515.1| GENE 105 96414 - 96677 59 87 aa, chain + ## HITS:1 COG:no KEGG:ECO103_5162 NR:ns ## KEGG: ECO103_5162 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 24 86 153 213 272 68 52.0 8e-11 MFVKIHHPTTLKAGDKLYRHAQQPVVPDDVLDALQKVARIRLDMNDFDGDRRGIADCLGD AEEALIEVVNRRAATLQAGNSPAIADV >gi|289774508|gb|GG745515.1| GENE 106 96857 - 97060 84 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNNVELIEKEYKELLDAALSNPGVADVMAFFSQQQPVLNAHNNLMASISIPAQIAMSTG TLIHKQN >gi|289774508|gb|GG745515.1| GENE 107 97473 - 98066 -152 197 aa, chain + ## HITS:1 COG:Cgl1774 KEGG:ns NR:ns ## COG: Cgl1774 COG0616 # Protein_GI_number: 19553024 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Corynebacterium glutamicum # 1 161 147 302 314 101 37.0 1e-21 MGKHSFLGPIDPQLVLQTAVGARMVPAQAILEQFKFAQDEITKNQAKLSSWITMLNQYGP DLLISCKNASELSKDLVQDWLEKYMFQNDKLSAQRIAAWLSTHSNFKTHSRYLSRDVLES QGLKITKLEDDQVLQDLVLSVHHANSLTFTSTASAKIIENHLGKAFISHANMPGAPMMNV PAMVFQGIMPPPMVDNQ >gi|289774508|gb|GG745515.1| GENE 108 98249 - 98407 172 52 aa, chain + ## HITS:1 COG:no KEGG:KPK_4159 NR:ns ## KEGG: KPK_4159 # Name: holE_2 # Def: DNA polymerase III theta subunit (EC:2.7.7.7) # Organism: K.pneumoniae_342 # Pathway: Purine metabolism [PATH:kpe00230]; Pyrimidine metabolism [PATH:kpe00240]; Metabolic pathways [PATH:kpe01100]; DNA replication [PATH:kpe03030]; Mismatch repair [PATH:kpe03430]; Homologous recombination [PATH:kpe03440] # 1 52 34 85 85 73 92.0 2e-12 MPVIAEQVAREQPEHLRDYFMERVRYYREQSVQLPRASDPRYLEMAEQNAKK >gi|289774508|gb|GG745515.1| GENE 109 98514 - 99110 450 198 aa, chain + ## HITS:1 COG:no KEGG:STY2052 NR:ns ## KEGG: STY2052 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 197 1 199 199 230 56.0 3e-59 MAQTLQFEKSYQNVLIPAEPGTSEYLQLIPVGQLLCGEFRKPRNYAFHKKFFKLLTLGYH YWTPSGGLIEPAERTLISGFIDFLSSDFEQRAALQNAAEMYLSSIGISRSRDMALLKHFE SFREWATIQAGFYDEYQMPDGSRRRVAKSISFASMDDSQFNGVYKSVLNVLWNYILRRKF HSPAEAENAASQLLSFAG >gi|289774508|gb|GG745515.1| GENE 110 99319 - 99609 203 96 aa, chain + ## HITS:1 COG:no KEGG:SSON_2444 NR:ns ## KEGG: SSON_2444 # Name: ybcO # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 96 1 96 96 171 90.0 6e-42 MANLRKAARGRECQVRIPGVCNGNPETTVLAHIRIAGLCGTGIKPPDLIAAIACSSCHDE IDRRTRLVDAEYAKECALEGMARTQVIWMKEGLIKA >gi|289774508|gb|GG745515.1| GENE 111 99741 - 99968 107 75 aa, chain + ## HITS:1 COG:rus KEGG:ns NR:ns ## COG: rus COG4570 # Protein_GI_number: 16128533 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli K12 # 1 72 46 117 120 125 83.0 2e-29 MLDIGLSTPLRIRIECHMPDRRRRDLDNLQKAAFDALTKSGFWLDDQQVDYYSVKRMPVV KGGRLELTITEMEAA >gi|289774508|gb|GG745515.1| GENE 112 100270 - 100791 264 173 aa, chain + ## HITS:1 COG:no KEGG:ECL_03212 NR:ns ## KEGG: ECL_03212 # Name: not_defined # Def: phage antitermination protein Q # Organism: E.cloacae # Pathway: not_defined # 1 164 57 220 225 249 81.0 5e-65 MVNPDGPPMSGSQSRAKGSSIALVLPVEYSTASWRRALLSLEDHQKAWLLWNYSDNIRWE HQETITRWAWGQFNEKLAGVRIAKKTVDRLRQLIWLAAQDVKAELAGREAYEYQALAELV GVAKSTWTETYLPHWLALRSSFVKLDSDALISVTRSRSQQKATNLDVSLAKPN >gi|289774508|gb|GG745515.1| GENE 113 100980 - 101120 61 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLNFWCGESPYAEGHCQSDMFFCALRVVCGLAATYREAPGTTPNKK >gi|289774508|gb|GG745515.1| GENE 114 101432 - 101743 290 103 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2894 NR:ns ## KEGG: ECS88_2894 # Name: not_defined # Def: holin protein # Organism: E.coli_S88 # Pathway: not_defined # 2 101 31 130 134 149 85.0 4e-35 MAKRMQDKESIAGMSWLVLLIIACWGGLVRYLIDVKQSKATWSLINALAQMVVSGFTGVI AGLVSIESGLSIYMILATAGISGAMGSVALTYFWERITGVKAQ >gi|289774508|gb|GG745515.1| GENE 115 101740 - 102279 378 179 aa, chain + ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 6 178 4 176 177 203 56.0 1e-52 MTADQIIEGILGKEDGYVDHPSDKGGPTRWGITQTTARAHGYTGDMRNLPRETAKQILLS DYWTGPRFDQVAALSTLLADELCDTGVNMGPSVASKFFQRWLTAMNMRGKLYPDLIPDGA IGPRTITALKGYLSARGKEGEQVLLRALNCSQGARYLELAEGREANEDFLYGWVKERVL >gi|289774508|gb|GG745515.1| GENE 116 102276 - 102620 228 114 aa, chain + ## HITS:1 COG:no KEGG:PANA_0897 NR:ns ## KEGG: PANA_0897 # Name: not_defined # Def: Hypothetical Protein # Organism: P.ananatis # Pathway: not_defined # 1 113 1 113 115 98 44.0 7e-20 MKMIIFALLVLVAVLVLLLLRKYTRLEFVGHASLLLKTWSVKLGAIGALVGVWAQSFPDA ALHAWAVLPPDIKNILPPNIVALISPALVVLAVLSQYVRQPALKEKADELKEQQ >gi|289774508|gb|GG745515.1| GENE 117 102617 - 102892 218 91 aa, chain + ## HITS:1 COG:no KEGG:KP1_2178 NR:ns ## KEGG: KP1_2178 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 91 3 93 93 100 84.0 1e-20 MSFEIIAGLVVVILGAIAGAFGIGHARGASKAKAKADQQRTEENAAATVAAAERRAEVTK GASDVQEDVKRMGDDDVDRELREKFTRPGSR >gi|289774508|gb|GG745515.1| GENE 118 102837 - 103037 126 66 aa, chain + ## HITS:1 COG:no KEGG:ECL_01681 NR:ns ## KEGG: ECL_01681 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 16 57 1 42 44 70 80.0 3e-11 MTMLIGSCAKSLPAPVVVDTACNWVRVIYLTDHDIDVLDKQTKRDILAHNKAVQANCSQL TEKGSR >gi|289774508|gb|GG745515.1| GENE 119 103851 - 104096 310 81 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2099 NR:ns ## KEGG: Kvar_2099 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 81 1 81 81 111 91.0 8e-24 MSEITASEQIRLDIIKKVNYDTAAAKLAIDWVGDSYLKSELFADSFDRVFTESEIVSKTR KAIQEATEALALFDTAAEKVS >gi|289774508|gb|GG745515.1| GENE 120 104959 - 105951 617 330 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2100 NR:ns ## KEGG: Kvar_2100 # Name: not_defined # Def: terminase small subunit # Organism: K.variicola # Pathway: not_defined # 1 330 1 334 334 522 87.0 1e-147 MAKPDWGELQRRFLSDHAATGVSPKDWCEAQGLNYATARRYIKKPTAQTAQKPAQKKLRT AQKEKCAEELVDSKLSPKVKRFIAEYLKDHNATAAAERAGYSDPNYGRQLLTNPNVAQAI AQQQKASIVRTLGSADEVLEQMWRLATFDANQLSQYRRGSCRYCWGFGHQYQWRDAVEFE EKLAEALAKKGKEPNDRGGYGYDHTSSPNPKCPRCNGDGIGQPFFADTRKLAPDAALAYS GVKLGKNGVEITAISRERMYEAVMKRLGLADSEFAQRLQQIEIERRQLEIDKLRKELAAD PEDDEPTPVAININVVDARVREEDGDSSDA >gi|289774508|gb|GG745515.1| GENE 121 105929 - 107236 809 435 aa, chain + ## HITS:1 COG:no KEGG:KPN_01413 NR:ns ## KEGG: KPN_01413 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 430 1 430 434 780 84.0 0 MAIAPTLNVPQARFLAMQQKFKAYVAGFGSGKTWVGCGGICKGFWEFPKINQGYFAPTYP QIRDIFYPTVEEVAHDWGLKVKIVESNKEVHFYSGRQYRGTTICRSMEKPDTIVGFKIGN ALVDELDVLKADKARQAWRKIIARMRYKVDGLRNGIDVTTTPEGFKFVYNQFVKAVREKP ELRSMYGLVQASTFDNEKNLPDDYIPSLLASYPPELIKAYLNGQFTNLTSGTIYHQFDRV LNNSSEEEQPGEALYIGMDFNVGKMAGIVHVLRLGLPHAVTEIINAYDTPDMIRIIKERF WLYADGDYRKVREIYIYPDASGDSRKSNNASKTDIEQLRQAGFNVIVDDANPPVKDRINS MNAMFCNGNGDRRYKVNVARCPVYADCLEQQVWDKNGEPDKKSDNDHPNDAAGYFIVKQF PIVRPAFSISLDTTF >gi|289774508|gb|GG745515.1| GENE 122 107236 - 108636 701 466 aa, chain + ## HITS:1 COG:no KEGG:YE2324 NR:ns ## KEGG: YE2324 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 460 1 462 462 625 65.0 1e-177 MANNDITYVRPEVRAAMPVWKKIRDVCKGADAVKAAGNEYLPFLDPSDKSARNKKRNADY IQRAVFYAITGNTKVGLLGLAFRKDPTMTAPDKLNYLRDNADGAGASIYQQSQQVTENIL EAAREGLYTDYAAETDEAIILRYQAESIINWRTKRINGRDQLVLVVLRECMEKEDGFAYE DEIQYRELALENGKFVCRVWRKSADAGSFSVTSEYHPKPKGEDFWDEIPFTFVGAQNNDP TIDESPLAALVEINLGHYRNSADYEDSVFFCGQVQPVISGLDTAWRDWLQDKGIRVGSRS PFLLPKEGSFTYAQAQPNTLAKEAMDSKRDYSVQLGARLIEQNGAVKTATQSSGEQTAST SVLGICVSNVSEAYTLALGWCARYLGIKGEEYRYSINQEFIAKVAESGMVTAIVNAWQYG AIRDTDMVRALQRLDLIDPADDPETVIDAIRNGAPNLIGGNNGNGE >gi|289774508|gb|GG745515.1| GENE 123 108707 - 109732 198 341 aa, chain + ## HITS:1 COG:no KEGG:KPN_01415 NR:ns ## KEGG: KPN_01415 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 341 1 341 341 593 86.0 1e-168 MIKVLNDSDAELTARLLVAIDTLDPESFTVSRLEALLVSVRAINKDAIQSMYAALSTELQ ELAKHEASFQMSLFQFAIPDDVLALHPLVGISPDAVYAAAMARPFQGRLLSEWASNLEAD RMARISNTVRQGFLLGDTHEQIAKKVRGHANRGYQDGALQMSRANAASIAKTAVGHLAST ARQSFASANDDILKGKQWLSTLDNRTSKDCRIRDRLKYTLDNKPIGHKVPYLQGPGKIHF CCRSTETYILKSSEELGIKVGEIKNSSRASMDGQVPADTNYQDWFSRQSFTRQAEIVGET RARLIREGGMSPDEFYNDRGEWLTLDQLRSKDEQAFRNARL >gi|289774508|gb|GG745515.1| GENE 124 109817 - 110602 335 261 aa, chain + ## HITS:1 COG:no KEGG:YE2322 NR:ns ## KEGG: YE2322 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 261 1 256 257 319 72.0 7e-86 MLIRNMLIKYYSAAGGEGGDGGGSGSGAPEITPKIQKLIDEQVSAQVSGLKNKNSELLGK LKESTESLKRFEGIDPDAVKTILQRFSDDEEAQLIAAGKIDEVLDKRTERLRADVDKQIK AANERAEKAEAFSNKFRDRVLGDAIRSAALKAGALPEASDDLILRAKGTFQLNDEGEAVA VDANGDVLFGKDGKTPLTPVEWAESLKETAPHLFPRAEGSGAGGHKPGGGGGSLKRSEMS SSDKADYIRKHGQQAYLKLPK >gi|289774508|gb|GG745515.1| GENE 125 110613 - 111566 849 317 aa, chain + ## HITS:1 COG:YPO2110 KEGG:ns NR:ns ## COG: YPO2110 COG5492 # Protein_GI_number: 16122345 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 313 1 314 401 479 77.0 1e-135 MPTTVNSDLIIYDDLAQTAFLERRQDNLEVFNAASNGAIILDNELIEGDFRKRTFYKVGG SIESRNVNSTDPVTGKKIGAGESVSVKAPWKYGPYETTEEAFKRRGRDVSEFSEVIGVDV ADATLEGYIKYALQGLVAAIGANADMTVSADIATDGKKTLTRGLRKYGDKFNRVALFVMH STTYFDIVDQAIDNKIYEEAGVVVYGGQPGTLGKPVLVTDTMPVDAILGLVAGAVSVTES QAPGFRSYDINDQENLAIGYRAEGTVNVELLGYSWDETKGANPDLTKIGTGANWKKHFTS NKSTAGVLIKLEAPAGE >gi|289774508|gb|GG745515.1| GENE 126 111888 - 112283 244 131 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1441 NR:ns ## KEGG: ECSE_1441 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 131 1 130 131 134 51.0 2e-30 MTVYITIQDVDELLGDTWAAADKKGKAVLQANTWMTALNLQDIDPEHIPEEVKQAGAFIA SVAAAGNLYQQKTDSGVVTSKSVEADDVKVSRTFAELSTTSTELLDPDLQLALDMLKPWM INPFQTFFVRA >gi|289774508|gb|GG745515.1| GENE 127 112285 - 112539 152 84 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0074c NR:ns ## KEGG: HCM2.0074c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 84 1 84 84 100 53.0 1e-20 MSDLKVVPFQKPSHHNLDNDQVIRLLKQALERAENGGCHSVAVILLDDEGNAIDCWHNGG RPYVMVGAMESLKTDFIHAHIERR >gi|289774508|gb|GG745515.1| GENE 128 112769 - 113152 228 127 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2109 NR:ns ## KEGG: Kvar_2109 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 127 1 127 127 223 95.0 1e-57 MGIRDELQTEVAAAFDTDLQDAVKDFTGSYTVRGAWDPVTETGTETQVTYSGRGVLARYK LRRIDGVNIMHGDVKLTALVNEVTDKPAIGHFITAPDPITGELQRYDVITASADSAGAAY SIQLRRV >gi|289774508|gb|GG745515.1| GENE 129 113154 - 113705 286 183 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2110 NR:ns ## KEGG: Kvar_2110 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 183 1 183 183 357 99.0 1e-97 MAKGWNIDPAAFAGLVAEDVKLRQRTIAIQLLNEIVQRSPVGNPELWAINATAVQYNKAV GEWNESLYADPANLTKTGRLRKKVRVNDSMDIRRPAEYRAGTFRASHFVSIGEPNHSVPT EPDPRGTMTFLNGKNIIDQAPAYSVIYIQSNLPYSVPLENGHSTQAPTGVYAVSFNGVIQ AYK >gi|289774508|gb|GG745515.1| GENE 130 113741 - 114094 69 117 aa, chain + ## HITS:1 COG:no KEGG:KPN_01424 NR:ns ## KEGG: KPN_01424 # Name: not_defined # Def: putative electron transfer flavoprotein subunit beta # Organism: K.pneumoniae # Pathway: not_defined # 1 117 14 130 130 229 100.0 2e-59 MAAQTAIASDAVDYPNGPVFDPSNRDIWARLTNIAGQAGATEIGDGPVVHRTGLLIIQLF VPVGSGTLLISRTADQLTELFEFKDDGKLSYFAVSAVPAGETDGWLQLNLQIPYRAL >gi|289774508|gb|GG745515.1| GENE 131 114118 - 115290 393 390 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2112 NR:ns ## KEGG: Kvar_2112 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 390 1 390 390 650 98.0 0 MSSGAKVVAAFIRETTPGITPTAGAWNLLRRSSFGLKPTQNTNDNDEIAGDRMTQGVSRG TVDVGGDVGTRFRWNQHDDFLASCFGSEWVNNVLTMGNGRITFSVATFASDVGIAQIARG CQVGTFQMEIPADGDITATITFAGLDWETKGDDTSYFTAPVDLAGALRYSFKEVTNIRLN GVDGGTGFCVDTFNIQFNNNMQTQRCIGTGSAFAGANIPTTFTPSGQITLSWSKAAWEVY KKTFTGETVPFSFTLENAEGAYTFDFPEVQISGDWPDAGSTDIVQVQLDITAANTPPTIT RVPKVPATAISVAPATSTGAVGSTVTLTATLTPADSTDTVQWTSSDPTIASVVSTGQKTA KVTRNAAGTATITGKARTFTATSEITVTAP >gi|289774508|gb|GG745515.1| GENE 132 115344 - 115826 211 160 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2113 NR:ns ## KEGG: Kvar_2113 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 160 1 160 160 298 99.0 5e-80 MLIISSQIDLNGERWFFPYKKPAGSKKKFTPEDEALFKLRLLVASSENPQYRSRNALVRR HIDKMDASYQVGTDAFDLASVGEIDSVDDLLIDNCARFLLKDWEGVGELVDGTETAVAYT PERGVALLKQNPSLYWLILAEAANIAQGKEQQTQETVKKP >gi|289774508|gb|GG745515.1| GENE 133 115994 - 116170 142 58 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2114 NR:ns ## KEGG: Kvar_2114 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 52 11 62 65 86 92.0 3e-16 MAGVPLPLSLNDIELYLASRTILIDRIEFDAAILALDDAWRDEWAEAQKRAADKKGSN >gi|289774508|gb|GG745515.1| GENE 134 116247 - 116603 180 118 aa, chain + ## HITS:1 COG:no KEGG:ETA_24170 NR:ns ## KEGG: ETA_24170 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 1 118 1 118 118 169 72.0 4e-41 MKKVIALALGALLLSGCTVRVADLTVASTKNYNLNGGKFYKGKRVTAEDSYPVIIFPLGI PNVKTAADRAIEKDRCAVGLSDVVVTQLNHSFLFGKIGLRVEGNLVIDRSLPGCENAS >gi|289774508|gb|GG745515.1| GENE 135 117156 - 119813 701 885 aa, chain + ## HITS:1 COG:Z2140 KEGG:ns NR:ns ## COG: Z2140 COG5281 # Protein_GI_number: 15801577 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 EDL933 # 117 804 57 794 859 105 23.0 5e-22 MTEQTSRLAIIIDSSGAEKQADNLATALVKMTQAGERAATSAGKVTKATDEEKQSLSELL DRIDPVNAALNKLDKQQQDLAKFKSKGMVDTDTFDLYSKKIEETRNRLTGFRDDLGKTGQ SAAQTAYAMRMIPAQMTDIVVGLSTGQSPFMVLMQQGGQLKDMFGGIIPAIKGVSTYVMG LVNPFTVAAGAVGLLTYAVYQNRLDIEAATKIATESLGTNGDAAERLALNMVAISDKTGL AIEDVGNMFITTNDGASEAVNKLIDVGFSYDEARQKVSQYKDSANFTALNADIDMHRREI LKIGDSWTAAAIKVKNYYTAADKGKQNVALGGAIDPTMRFIGQAIDLQSTMNALTIQGNK AVAESVDWINKEYLAADRVAGAEARLKEAREQSRKIAFSGNKEAIDQANALIAVREKELE QAKKAEQPKTHKGKAYTEDAATRLLDQINQQTAALQSQLDASDKLNSATQARVKFEQQIA DLKSKTQLTADQKSILSRSDEILQAYKQQEALQNSVKTLDDYRKMQEQVKTKDERTNDLL KTRLELLEKAKATGQLKPGEYEKTRADIYQNTDMQLPSTVRNVVGNLTPTGGRLSGTFEG MQGQINEYDQAQQELQRWLAAQEEAYAKAGEITAEGEARMTSIRQRAADANQVIEAQKNT IISAATQSLFDSTADIMRTGFGEQSAIYKVAFAASKAFAIADSMVKIQQAIASGAVSAPY PANIIAMASIAAQTASIVSNIQAVSGVGFASGGYTGPGGKYQPAGIVHKGEYVFDQASTN RIGVSQLEALRNGQPLDATLGRTGFGTGVQNVNSDNSSKTTIHAPIEQHFHTPLGVTPDQ MALSMAQTQKRATTEALDQVAAQLLRGDGKVGKAMRSKYPGRGLE >gi|289774508|gb|GG745515.1| GENE 136 119813 - 120286 418 157 aa, chain + ## HITS:1 COG:no KEGG:KPN_01430 NR:ns ## KEGG: KPN_01430 # Name: not_defined # Def: alkanesulfonate ABC transporter membrane protein # Organism: K.pneumoniae # Pathway: not_defined # 1 154 1 154 157 289 98.0 2e-77 MTDIYYPHDSLPMPLQEGYGFQPVSPLKRTQLTTGRARQRRAYTSTPTQASITWFMETDA QGLAFESWFRDALSDGAAWFMMKLQTPAGIKFYKCRFTDIYQGPVLVAPIYWKYTATLEL WERPLAPAPWGNYPEWIVGSSLLDIALNKEWPKHDAD >gi|289774508|gb|GG745515.1| GENE 137 120273 - 120755 355 160 aa, chain + ## HITS:1 COG:no KEGG:CKO_01850 NR:ns ## KEGG: CKO_01850 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 4 160 6 162 162 222 71.0 4e-57 MTQIKRLYASSGPEVIIETLQITIGSDVHYLCQGYDNITATTENGDTVTFSACSIDIALP ARNADGTQDLKFALCNIDGVVSTAIRNALANRLSAFLTYRRYISTDLVAPAEVPYTLKIK SGYWTATEAQITAGYMNILDTAWPRYRYTLPVFPGLRYIS >gi|289774508|gb|GG745515.1| GENE 138 120765 - 121145 373 126 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2119 NR:ns ## KEGG: Kvar_2119 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 126 1 126 126 215 79.0 4e-55 MFNPDKYRSVTWLKGGRVYPLLDCFGIVNEIRRDLNLPVWPDFAGVTKDDGGLDREARRM MLTLERCEPCEGAGVACYSGSTVTHVGIVVSIGGLLHVAECNPGTNVTFLPLPRFKRRFV KVEFWQ >gi|289774508|gb|GG745515.1| GENE 139 121142 - 124177 1567 1011 aa, chain + ## HITS:1 COG:no KEGG:KPN_01432 NR:ns ## KEGG: KPN_01432 # Name: not_defined # Def: putative kinase # Organism: K.pneumoniae # Pathway: not_defined # 1 1009 1 1015 1028 945 50.0 0 MTIRFYPSRLPGEPLETHEHGVTSIRSWLVANVEGYEDRDVPPLTVEVEGLLIPPGEWAK CVIRPDSDVRLYPVPFGLEAATIAWIGVGISVAAAAYSLFMMSNIDTGGYTSSTGRSLDL NPAKANTAKLGDAIREVFGRVRIYPDYVVQPVTRFDAADPTKMRVQMLLCLGVGDLIYTN GDIRVGSTPASTLPGFSSTHYPPGADVSGDERSENWVNSTEVGGTSSGTGLDMAQTSPDA DDIIADSMTVSGSSVTFTGLDTDDDDDNDENDNALPPSWVAGAVVELKAPANYQITTAAG YSVIASPLLTEIAPVVGMPVTLGFNSVDYDLFIASYTPGQAAVPGTGGSAAKVQASAAPT TYDFSTSSSTFTITWQGVTYPVSLVANYVSMSGLLAAITEGLTGSGLVAQDNGGTVLITE SASPFAGGAITSSSLPATVFGDAPVYTSGTASTGGSPAVTANVTLAYNSATGTAFSGMPE GVQRLSLAHRGNEYRIVSADGTTATVARLVSGAVDESWPGFSARTMIDYEATGLNDTLSW LGPFLVCPENEVVDAFEVNFSFPNGICGFDSKGKKRIRHVEWEIQYRVYGSGSGWVSHQG EYALKNVNGLGFTERITLSSPGLVEVRCRRRNEQGSNNARDSMYWQALRGRLLTRPSSYP GVSLMAVTVETGGKLAAQSDRRVNVVATRAYNSGTARTISGALLHVANSLGLEMDVDTIN ALESAYWTPRGENFDFATGDSISALEMLQKIANAGKSRFLLSDGLATVNREGIKPWTGVI TPHEMVEELQSGFTVPSDDDFDGVDVTYINGTTWAEETVKCRTPDNPTPVKIENYKLDGV LNQDHAYQIGMRRLMKYLQQRVTFQTTTELDALCYNTGDRIVLTDDIPGNNTISCLVEAM TTAGGVTTFTVTEPLDWSFENPRALIRYQDGSASGLMVASRVGDFQLSVPHLSAFDDPMK VDLSSATIEPIRLVFCGSTRHVYDAIVEEIAPQSDGTCQVTAKEYLESFSS >gi|289774508|gb|GG745515.1| GENE 140 125078 - 126386 470 436 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVGGTLTATGRKMPSSQAVDSVRGLIDSQGEHQFSVVFKNGLSPFGYKDGRLYADEFQK LYSSDAGLEFGGSIIDNNPPDGWRFVIYYRNGLVMCGQRNDGTMIGFGEGGSGGGSIEPG DTAADYDSIRNYTGTATVRDVVGQRTGGRFVVNPDDTTSEEIPGGILVDVLGRRWYRQAE FVSYDMFMAPRVPGATLLAVQVALAMGNRSSAIAYLSGVEAADAAIQNAHRYANLLNIPV CQNDGAFLVLVDHEAEVRTKTSLGGSIIFTSADSGVNEIRWGPLRLLDPTAPEPKRMFNI KGKERIELTPAELATFNTSYSQYLKKGSNYLPYPKLYPYYGGMFYALSNEVEIYRNGNRD NPRDRVLYRDFSRIGRNGALTERIVKDIPTGSIGYAAIIPKEDDFLEFECPHFIELGDSR RFLNIEVSRPMVRIKN Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:14:40 2011 Seq name: gi|289774416|gb|GG745516.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.9, whole genome shotgun sequence Length of sequence - 96001 bp Number of predicted genes - 93, with homology - 92 Number of transcription units - 52, operones - 24 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.630 - CDS 250 - 1101 884 ## COG0796 Glutamate racemase 2 1 Op 2 . - CDS 1046 - 2902 1708 ## COG4206 Outer membrane cobalamin receptor protein 3 1 Op 3 . - CDS 2945 - 3067 63 ## KP1_0120 hypothetical protein - Prom 3259 - 3318 2.8 + Prom 3185 - 3244 5.3 4 2 Tu 1 . + CDS 3269 - 4369 1557 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 4381 - 4413 3.2 - Term 4355 - 4413 14.1 5 3 Op 1 . - CDS 4423 - 4782 389 ## Kvar_4968 hypothetical protein 6 3 Op 2 . - CDS 4798 - 5433 626 ## COG1309 Transcriptional regulator - Prom 5576 - 5635 3.7 + Prom 5540 - 5599 4.3 7 4 Tu 1 . + CDS 5630 - 7030 441 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 8 5 Tu 1 . - CDS 7013 - 7930 1042 ## COG0583 Transcriptional regulator - Prom 7964 - 8023 4.6 - Term 8126 - 8168 2.5 9 6 Op 1 2/0.630 - CDS 8190 - 9563 1785 ## COG0165 Argininosuccinate lyase - Prom 9593 - 9652 2.9 10 6 Op 2 8/0.000 - CDS 9662 - 10435 1031 ## COG0548 Acetylglutamate kinase 11 6 Op 3 . - CDS 10445 - 11449 914 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 11521 - 11580 5.6 + Prom 11455 - 11514 5.8 12 7 Tu 1 . + CDS 11563 - 12714 1290 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Prom 12887 - 12946 4.1 13 8 Tu 1 . + CDS 13012 - 15624 3621 ## COG2352 Phosphoenolpyruvate carboxylase + Term 15637 - 15672 7.2 14 9 Tu 1 . - CDS 15673 - 16323 858 ## COG3443 Predicted periplasmic or secreted protein - Prom 16369 - 16428 4.0 + Prom 16316 - 16375 4.0 15 10 Tu 1 . + CDS 16471 - 17334 670 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 17388 - 17447 3.5 16 11 Op 1 3/0.444 + CDS 17540 - 18202 953 ## COG0176 Transaldolase 17 11 Op 2 . + CDS 18257 - 19360 1384 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 19363 - 19414 8.2 - Term 19360 - 19392 5.0 18 12 Tu 1 . - CDS 19450 - 20337 1298 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 20402 - 20461 2.2 - Term 20478 - 20518 3.2 19 13 Tu 1 . - CDS 20565 - 21473 876 ## COG0583 Transcriptional regulator - Prom 21571 - 21630 3.0 20 14 Tu 1 . + CDS 21565 - 21936 623 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 21944 - 21974 4.3 - Term 21927 - 21967 9.9 21 15 Op 1 5/0.222 - CDS 21974 - 24406 3006 ## COG0527 Aspartokinases 22 15 Op 2 . - CDS 24409 - 25569 1343 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 25770 - 25829 5.1 + Prom 25651 - 25710 6.7 23 16 Tu 1 . + CDS 25837 - 26154 541 ## COG3060 Transcriptional regulator of met regulon + Term 26166 - 26199 6.1 - Term 26213 - 26246 4.5 24 17 Tu 1 . - CDS 26257 - 26469 385 ## PROTEIN SUPPORTED gi|206578666|ref|YP_002241195.1| 50S ribosomal protein L31 - Prom 26619 - 26678 4.8 + Prom 26638 - 26697 2.6 25 18 Tu 1 . + CDS 26722 - 28917 2425 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 26 19 Tu 1 . + CDS 29068 - 30096 976 ## COG1609 Transcriptional regulators + Term 30101 - 30128 -0.8 + Prom 30099 - 30158 2.4 27 20 Tu 1 . + CDS 30304 - 31185 870 ## COG3087 Cell division protein + Term 31221 - 31257 7.7 + Prom 31235 - 31294 3.3 28 21 Op 1 24/0.000 + CDS 31358 - 31807 569 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 29 21 Op 2 6/0.148 + CDS 31817 - 33151 1208 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 33180 - 33213 4.5 30 22 Op 1 7/0.148 + CDS 33221 - 34141 1235 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Prom 34149 - 34208 5.0 31 22 Op 2 . + CDS 34234 - 34719 545 ## COG0684 Demethylmenaquinone methyltransferase + Term 34738 - 34772 6.0 - Term 34708 - 34756 9.1 32 23 Op 1 . - CDS 34781 - 35743 1223 ## COG0205 6-phosphofructokinase - Prom 35821 - 35880 2.5 33 23 Op 2 . - CDS 35940 - 36842 1010 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 36863 - 36922 3.4 - Term 36931 - 36961 4.3 34 24 Tu 1 . - CDS 37002 - 37505 208 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 37670 - 37729 3.1 35 25 Op 1 40/0.000 + CDS 37655 - 38353 844 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 36 25 Op 2 . + CDS 38350 - 39723 1526 ## COG0642 Signal transduction histidine kinase 37 26 Op 1 . - CDS 39788 - 40462 557 ## COG2258 Uncharacterized protein conserved in bacteria - Term 40477 - 40516 6.8 38 26 Op 2 . - CDS 40535 - 41155 579 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 41207 - 41266 4.9 + Prom 41210 - 41269 9.0 39 27 Tu 1 . + CDS 41445 - 42479 1642 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 40 28 Op 1 8/0.000 - CDS 42512 - 43357 770 ## COG2207 AraC-type DNA-binding domain-containing proteins 41 28 Op 2 . - CDS 43431 - 44267 933 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 44495 - 44554 2.3 42 29 Op 1 6/0.148 + CDS 44578 - 46044 1898 ## COG1070 Sugar (pentulose and hexulose) kinases 43 29 Op 2 5/0.222 + CDS 46041 - 47300 1698 ## COG4806 L-rhamnose isomerase 44 30 Op 1 . + CDS 47452 - 48282 1357 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 45 30 Op 2 16/0.000 + CDS 48364 - 49350 1430 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 49439 - 49488 1.1 + Prom 49417 - 49476 2.8 46 30 Op 3 21/0.000 + CDS 49497 - 51008 171 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 47 30 Op 4 11/0.000 + CDS 51008 - 52012 1319 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 48 30 Op 5 1/0.667 + CDS 52009 - 53013 1473 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 53092 - 53149 4.3 49 31 Op 1 2/0.630 + CDS 53171 - 54319 1705 ## COG1454 Alcohol dehydrogenase, class IV 50 31 Op 2 . + CDS 54337 - 54630 322 ## COG3254 Uncharacterized conserved protein + Term 54637 - 54675 9.5 - Term 54624 - 54663 10.1 51 32 Op 1 . - CDS 54668 - 55933 1709 ## COG0477 Permeases of the major facilitator superfamily - Term 55940 - 55966 1.7 52 32 Op 2 . - CDS 55975 - 58098 2798 ## COG3345 Alpha-galactosidase - Term 58131 - 58190 -0.5 53 33 Op 1 . - CDS 58214 - 59209 883 ## COG1609 Transcriptional regulators 54 33 Op 2 . - CDS 59297 - 59845 633 ## COG1396 Predicted transcriptional regulators - Prom 59903 - 59962 5.1 + Prom 59793 - 59852 4.5 55 34 Op 1 . + CDS 59916 - 60605 704 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 56 34 Op 2 . + CDS 60605 - 60928 611 ## Kvar_5022 branched-chain amino acid transport + Term 61008 - 61036 3.0 57 35 Op 1 1/0.667 - CDS 60925 - 61518 307 ## COG1940 Transcriptional regulator/sugar kinase 58 35 Op 2 . - CDS 61515 - 61952 484 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 59 35 Op 3 . - CDS 61962 - 62231 394 ## KP1_0054 hypothetical protein 60 35 Op 4 . - CDS 62290 - 63132 670 ## COG0191 Fructose/tagatose bisphosphate aldolase 61 35 Op 5 11/0.000 - CDS 63119 - 64486 1714 ## COG3037 Uncharacterized protein conserved in bacteria 62 35 Op 6 . - CDS 64479 - 64793 395 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 63 35 Op 7 . - CDS 64805 - 65785 699 ## COG0205 6-phosphofructokinase - Prom 65808 - 65867 3.5 - Term 66126 - 66163 5.5 64 36 Tu 1 . - CDS 66180 - 66392 250 ## ECL_05087 hypothetical protein - Prom 66442 - 66501 4.2 65 37 Tu 1 . - CDS 66521 - 67357 585 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity + Prom 67258 - 67317 4.1 66 38 Op 1 5/0.222 + CDS 67514 - 68101 493 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 67 38 Op 2 16/0.000 + CDS 68150 - 70564 3176 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 68 38 Op 3 12/0.000 + CDS 70577 - 71479 1219 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 69 38 Op 4 9/0.000 + CDS 71476 - 72111 709 ## COG2864 Cytochrome b subunit of formate dehydrogenase 70 38 Op 5 . + CDS 72108 - 73037 1301 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation + Term 73055 - 73086 5.5 71 39 Op 1 . - CDS 73211 - 73594 240 ## KPK_5496 PIN domain protein 72 39 Op 2 . - CDS 73594 - 73836 266 ## Kvar_5038 CopG domain protein DNA-binding domain protein - Prom 74017 - 74076 5.2 + Prom 73784 - 73843 3.1 73 40 Tu 1 . + CDS 74041 - 74958 751 ## COG0657 Esterase/lipase 74 41 Op 1 5/0.222 - CDS 74973 - 75914 1137 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 75 41 Op 2 7/0.148 - CDS 75959 - 76396 228 ## COG1490 D-Tyr-tRNAtyr deacylase 76 41 Op 3 2/0.630 - CDS 76393 - 77253 914 ## COG1295 Predicted membrane protein 77 41 Op 4 1/0.667 - CDS 77247 - 77846 711 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 77870 - 77929 2.9 - Term 77920 - 77962 4.0 78 42 Tu 1 . - CDS 77981 - 79804 2123 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 79830 - 79889 3.9 79 43 Tu 1 . + CDS 79757 - 79852 64 ## + Term 79956 - 80016 3.5 + Prom 80048 - 80107 7.0 80 44 Tu 1 . + CDS 80183 - 81592 1544 ## COG0174 Glutamine synthetase + Term 81605 - 81654 4.2 + Prom 81694 - 81753 3.9 81 45 Op 1 14/0.000 + CDS 81781 - 82830 1074 ## COG3852 Signal transduction histidine kinase, nitrogen specific 82 45 Op 2 . + CDS 82839 - 84248 1201 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 84279 - 84305 -0.6 - Term 84408 - 84434 1.0 83 46 Tu 1 . - CDS 84509 - 85882 1372 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 85984 - 86043 2.1 84 47 Tu 1 . - CDS 86071 - 86577 554 ## COG3078 Uncharacterized protein conserved in bacteria - Prom 86617 - 86676 4.5 + Prom 87046 - 87105 5.8 85 48 Tu 1 . + CDS 87162 - 87794 754 ## COG0218 Predicted GTPase + Term 87806 - 87851 5.3 - Term 87881 - 87918 10.1 86 49 Tu 1 . - CDS 88142 - 90934 3109 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 91143 - 91202 5.0 + Prom 91083 - 91142 4.4 87 50 Tu 1 . + CDS 91331 - 92230 699 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 92251 - 92288 6.5 - Term 92218 - 92268 -0.3 88 51 Op 1 5/0.222 - CDS 92280 - 92903 910 ## COG0526 Thiol-disulfide isomerase and thioredoxins 89 51 Op 2 5/0.222 - CDS 92931 - 93917 720 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 90 51 Op 3 . - CDS 93993 - 94262 489 ## COG3084 Uncharacterized protein conserved in bacteria - Prom 94284 - 94343 2.7 + Prom 94228 - 94287 4.8 91 52 Op 1 11/0.000 + CDS 94334 - 94915 213 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 92 52 Op 2 . + CDS 94912 - 95418 311 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 93 52 Op 3 . + CDS 95461 - 96001 -271 ## SPAB_04232 hypothetical protein - 5S_RRNA 95820 - 95949 99.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|289774416|gb|GG745516.1| GENE 1 250 - 1101 884 283 aa, chain - ## HITS:1 COG:STM4131 KEGG:ns NR:ns ## COG: STM4131 COG0796 # Protein_GI_number: 16767395 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 477 87.0 1e-134 MATNLQDGNTPCLAATPSDPRPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPY GEKSEEFIVERVVEIVTAVQQRYPLALAVIACNTASTVSLPALREKFAFPVVGVVPAIKP AARLTANGIVGLLATRGTVKRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPL EELRRILRPWLRMQEPPDTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLE HEAPDAKSSDENKAFCMALTAETEQLLPVLHRYGFPTLEKLPL >gi|289774416|gb|GG745516.1| GENE 2 1046 - 2902 1708 618 aa, chain - ## HITS:1 COG:YPO3910 KEGG:ns NR:ns ## COG: YPO3910 COG4206 # Protein_GI_number: 16124042 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Yersinia pestis # 2 618 3 625 625 666 57.0 0 MIKKASLMTALSVTAFSGWAQDSNSDTLVVTANRFQQPVNTVLAPTDIVTRDDIDRWQSK DLNDVMRRLPGVDIARNGGMGQSASLYVRGTEARHVLVLIDGVPMARPGISNGVDISQIP ISLVQRVEYIRGPRSAVYGSGAIGGVVNIITMTDSDRSQVNVGMGSNGYQTYDGAINKRF GDTVVTAAGAYQTTKGFNVQPNSPYSGDSDRDGYRNKLFLGGVQHKFDDNFSGFFRGYGY TANTDYDQGSYGYVGGNDERQNYTQSWDTGLRYSSGIYSSQLIANYQRIKDYNYSSDAGR YAAGTTLDDMEQRYIQWGNNIEVGHGAISGGVDWKQEKLTSSSTTLSDAYKRDTTGLYLT GQQQIDSVTLEASGREDHDEQFGWHGTWQTAAGWEFIDGYRATLSYGTGFLAPSLGQQYG ATRFASFYGPGIASNPNLKPEESKQWEAGIDGLTGPLDWRISAYHYEIQNLIDYKNNQYI NVKSATIKGLEWTGNVTTGPVEHHLTLQYVDPRDDDTGKVLYRRAKQQVKYELTGQIYDL DWNVMYQYLGKRYDDDYDNGRDVKMGGLSLWDVGLSYPVTSHLTVRGKIANLFDKDYETV YGYQSAGREYTLSGSYTF >gi|289774416|gb|GG745516.1| GENE 3 2945 - 3067 63 40 aa, chain - ## HITS:1 COG:no KEGG:KP1_0120 NR:ns ## KEGG: KP1_0120 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 40 1 40 40 63 100.0 2e-09 MSALGADTAASRGKSLFLETASKPEDLPEYVALGFIVASN >gi|289774416|gb|GG745516.1| GENE 4 3269 - 4369 1557 366 aa, chain + ## HITS:1 COG:trmA KEGG:ns NR:ns ## COG: trmA COG2265 # Protein_GI_number: 16131803 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 366 1 366 366 703 93.0 0 MTPEHLPTEQYEAQLAEKVVRLQTMMAPFATPVPEVFRSPVSHYRMRAEFRLWHDGDDLY HIIFDQQTRSRIRVDSFPAASALINQLMTAMLEGVRNNPVLRHKLFQIDYLTTLSNQAVV SLLYHKKLDDAWREQAEALRDALRAQGLNVHLIGRATKTKIELDQDYIDERLPVGGREMI YRQVENSFTQPNAAMNIQMLEWALDVTKGATGDLLELYCGNGNFSLALARNFDRVLATEI AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLQSYQCETIFVDP PRSGLDSETEKMVQAYPRILYISCNPETLCRNLETLSQTHNVTRLALFDQFPYTHHMECG VLLTRK >gi|289774416|gb|GG745516.1| GENE 5 4423 - 4782 389 119 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4968 NR:ns ## KEGG: Kvar_4968 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 119 1 119 119 217 100.0 1e-55 MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTIYCLHQRYQNRSMP VGLPGLAAAFFILGVLLYSTVVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKNTAAE >gi|289774416|gb|GG745516.1| GENE 6 4798 - 5433 626 211 aa, chain - ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 207 19 225 234 345 98.0 2e-95 MMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELG LTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAA FRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGPEQRRQL EERLVLQLRMISKGAYYWYRREQEKMSHHSE >gi|289774416|gb|GG745516.1| GENE 7 5630 - 7030 441 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 174 27 2e-42 MSHSWDYDAIVIGSGPGGEGAAMGLVKQGVRVAVIERYHNVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDHSRLLRSSFADILNHADSVINQQTHMRQGFYERNHCEILQGNAHFV DEHTLALECHDGTVETVTAEKFVIACGSRPYHPADVDFHHPRIYDSDSILSLQHEPRHVI IYGAGVIGCEYASIFRGMEVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGVDDGVIMHLKSGKKLKADCLLYANGRTGNTDTLALENIGLQTDSRGQLKVNSMYQ TALPHIYAVGDVIGYPSLASAAYDQGRIAAQALVKGEASAHLIEDIPTGIYTIPEISSVG KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMSVGTLKILFHRETKEILGIHCFGERAAEI IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|289774416|gb|GG745516.1| GENE 8 7013 - 7930 1042 305 aa, chain - ## HITS:1 COG:STM4125 KEGG:ns NR:ns ## COG: STM4125 COG0583 # Protein_GI_number: 16767389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 305 1 305 305 588 98.0 1e-168 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GLLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTIGPYLLPQIIPMLHQTFPKL EMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMMLAIYEDHPWANRDR VPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPQERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEHLAEAIRGTMDGHFDKA LKQAV >gi|289774416|gb|GG745516.1| GENE 9 8190 - 9563 1785 457 aa, chain - ## HITS:1 COG:STM4123 KEGG:ns NR:ns ## COG: STM4123 COG0165 # Protein_GI_number: 16767388 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Salmonella typhimurium LT2 # 1 457 1 457 458 849 95.0 0 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLSAAEQQQLEE ALNVLLEEVRANPQQILASDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLW CKDTVVELLSANRQLQSALVETAQHNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLVRDE SRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS DASIGMVHLSRFAEDLIFFNSGEANFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMATLVLDGIQVKRPRCAEAA QQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIAQGKPLEALPLADLQKFSPVIADD VYPILSLQSCLDKRAAKGGVSPQQVAQAISDAKARLS >gi|289774416|gb|GG745516.1| GENE 10 9662 - 10435 1031 257 aa, chain - ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 257 2 258 258 426 93.0 1e-119 MNPLIIKLGGVLLDSEEALERLFTALVNYREAHQRPLIIVHGGGCVVDELMKQLNLPVKK KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHGISSVGLFLGDGDSVKVTQLDAELGH VGLAQPGSPALINTLLAGGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD VSGILDGKGQRIAEMTAEKAEQLIEQGIITDGMIVKVNAALDAARALGRPVDIASWRHAE QLPALFNGTPIGTRILA >gi|289774416|gb|GG745516.1| GENE 11 10445 - 11449 914 334 aa, chain - ## HITS:1 COG:STM4121 KEGG:ns NR:ns ## COG: STM4121 COG0002 # Protein_GI_number: 16767386 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 600 88.0 1e-172 MLNTLIVGASGYAGAELVTYINRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDMPL QPMSDISEFSAGVDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVNDGAFYEKYYGF THQHPDLLKQAVYGLAEWSADALKEAQLIAVPGCYPTAAQLSLKPLIEANLLDLNQWPVI NATSGVSGAGRKAAIGNSFCEVSLQPYGIFNHRHQPEIASHLGAKVIFTPHLGNFKRGIL ETITCRLKPGVGHAQIAAVYQKAYADKPLVRLYDKGVPALKSVEGLPFCDIGFAVQDDHL IVVAAEDNLLKGAAAQAVQCANIRFGFAETQSLI >gi|289774416|gb|GG745516.1| GENE 12 11563 - 12714 1290 383 aa, chain + ## HITS:1 COG:STM4120 KEGG:ns NR:ns ## COG: STM4120 COG0624 # Protein_GI_number: 16767385 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Salmonella typhimurium LT2 # 1 383 1 383 383 741 91.0 0 MKNNLPPFIEIYRALIATPSISATEEDLDQSNESLINLLAGWFRDLGFNVEIQPVPDTRH KFNLLASTGHGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFI LDALRDVDVTTLKKPLYILATADEETSMAGARYFAETTQLRPDCAIIGEPTSLQPIRAHK GHMSNAIRIQGQSGHSSDPARGVNAIELMHDAIGRIMQLRDLLKERYHFEAFTVPYPTLN LGAIHGGDASNRICACCELHMDIRPLPGMTLNDLNGLLGEALAPVSERWPGRLTVSELHP PIPGYECPPDHKLVQVVEKLLGAQTDVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEY LETRFIKPTRELISQVVHHFCWH >gi|289774416|gb|GG745516.1| GENE 13 13012 - 15624 3621 870 aa, chain + ## HITS:1 COG:STM4119 KEGG:ns NR:ns ## COG: STM4119 COG2352 # Protein_GI_number: 16767384 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Salmonella typhimurium LT2 # 1 870 14 883 883 1580 91.0 0 MLGKVLGDTIKDALGENILDRVETIRKLSKSSRAGNEANRQELLTTLQNLSNDELLPVAR AFSQFLNLANTAEQYHSISPNGEAASNPEVIARTLRKLKDQPNLNEDTIKKAVESLSLEL VLTAHPTEITRRTLIHKMVEVNSCLKQLDNKDIADYEHHQLMRRLRQLIAQSWHTDEIRK YRPSPVDEAKWGFAVVENSLWEGVPNYLRELNEQLEANLGYQLPVDFVPVRFTSWMGGDR DGNPNVTADITRHVLLLSRWKATDLFLKDVQVLISELSMVECTDELRALAGAEGAQEPYR YLMKKLRTQLMETQAWLEARLKGQKLPKPAGLITQNEQLWEPLYACYKSLQACGMGIIAN GELLDTLRRVKSFGVPLVRIDIRQESTRHTEALGEMTRYLGIGDYESWSEADKQAFLIRE LNSKRPLLPRQWEPSEETREVLDTCKVIAEAPRGSIAAYVISMAKTPSDVLAVHLLLKEA GIGFALPVAPLFETLDDLNNANDVMTQLLNIDWYRGFIQGKQMVMIGYSDSAKDAGVMAA SWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQ GEMIRFKYGLPEVTISSLSLYTSAILEANLLPPPEPKAEWRDIMAELSDVSCKMYRGYVR ENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLG AGAALQKVVEGGKQSELEAMCRDWPFFSTRLGMLEMVYSKADLWLAEYYDQRLVKPELWA LGTELRKLLAADINVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQA EEAGKDPDPRVEQALMVTIAGVAAGMRNTG >gi|289774416|gb|GG745516.1| GENE 14 15673 - 16323 858 216 aa, chain - ## HITS:1 COG:STM1263 KEGG:ns NR:ns ## COG: STM1263 COG3443 # Protein_GI_number: 16764614 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Salmonella typhimurium LT2 # 8 216 7 215 215 293 65.0 2e-79 MTRKIPLLAFGFGMALASAQAFAHGNHNHGPALTDIERQASEGIFADKNVQDRALSDWEG VWQSVNPYLLNGDLDPVLEQKAKKPGGKSVEEYRAYYKKGYATDVEQIGIENDVIEFHVG ETVNSCKYRYSGYKILHYASGKKGVRYLFECQQGDANAPKFVQFSDHIIGPRKSQHFHIF MGNESQEALLKEMDNWPTYYPYALHKEQIVDEMLHH >gi|289774416|gb|GG745516.1| GENE 15 16471 - 17334 670 287 aa, chain + ## HITS:1 COG:STM4117 KEGG:ns NR:ns ## COG: STM4117 COG2207 # Protein_GI_number: 16767382 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 280 1 277 283 343 62.0 3e-94 MDNDIDQLIDSFLKKQNGIGRVYFADEMRSPAEPVVQVDFPRLNIILNGQLPDRALGENA SPLEANDVLYIPGDSWNCPQWQAPCLLLSILFDKQRLECSLQHWNGKAITVVEKRQALRR GPRVGSFLLQALNELRMQPQEQRTARSIVVSLLSHCHDLLGSQAQTSSRSQALFEAIRQY MDAHYAEPLSRESVAQAFYLSPNYLSHLFQKCGPMGFNEYLNHIRLEQARMLLKGHDMKV KDIAHACGFADSNYFCRLFRKTTERSPSEYRRQYHSQLTEISSPAQN >gi|289774416|gb|GG745516.1| GENE 16 17540 - 18202 953 220 aa, chain + ## HITS:1 COG:STM4109 KEGG:ns NR:ns ## COG: STM4109 COG0176 # Protein_GI_number: 16767375 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 372 90.0 1e-103 MELYLDTANVAEVERLARIYPLAGVTTNPSIIAAGKTPVWDVLPRLQKAIGPEGTLFAQT MSRDAQGMVEEAKRLSNAVPGIVVKIPVTAEGLAAIKMLKKEGIPTLGTAVYSASQGLLA ALAGAKYVAPYVNRVDAQGGDGIRMVQELQSLLEMHAPESKVLAASFKTPRQALDCLLAG CEAITLPLDVAQQMLGTPAVESAIEKFEQDWNNAFGTLNL >gi|289774416|gb|GG745516.1| GENE 17 18257 - 19360 1384 367 aa, chain + ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 367 1 367 367 649 90.0 0 MDRIIQSPGKYIQGAGAIKRLGDYLKPLAERWLLVGDKFVLGFAEEMLRKSLADAGLAAE IAPFGGECSHNEINRLRDIAGSAKCTAVLGIGGGKTLDTAKALAHFMNVPVAIAPTIAST DAPCSALSVIYTDEGEFDSYLMLPHNPNMVIVDTQIVAGAPARLLAAGIGDALATWFEAR ACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVVEANTYL SGVGFESGGLAAAHAIHNGMTAIPDAHHYYHGEKVAFGTLTQLVLENAPVDEIETVAALC HSVGLPITLAQLDIKGDIPTKMRLVAEAACAEGETIHNMPGGVDSDQVYAALLVADQYGQ RFLQEWE >gi|289774416|gb|GG745516.1| GENE 18 19450 - 20337 1298 295 aa, chain - ## HITS:1 COG:STM4105 KEGG:ns NR:ns ## COG: STM4105 COG0685 # Protein_GI_number: 16767371 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Salmonella typhimurium LT2 # 1 295 1 295 296 592 96.0 1e-169 MSFFHANQREALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWKSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKERTGLEAAPHLTCIDATRDELRTIAQDYWNNGIRHIVALRGD LPPGSGKPDMYAADLVTLLKEVGDFDISVAAYPEVHPEAKSAQADLLNLKRKVEAGANRA ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPVWMSKMFE GLDNDAETRQLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPA >gi|289774416|gb|GG745516.1| GENE 19 20565 - 21473 876 302 aa, chain - ## HITS:1 COG:ynfL KEGG:ns NR:ns ## COG: ynfL COG0583 # Protein_GI_number: 16129553 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 8 287 2 282 297 113 31.0 4e-25 MTTSRLHSLDIRLLRAFAVVAEENNISRAAQRLFISQPPLTRHIRHLEAQLGVTLFQRHS KGLILTDAGREVLEMIRPLLVLQERTLAALSQLSAHSPQPLRLGLTTAFEQGIFAAVESA LSDHTRTLHITRHASPALAQQVRKGKLDAALVALPLNTEGLHLHPLPYQEPLIAALPASW PEAATPALTLRALNHRPLFWFKRERNPDFFDYTRRIFDRAGYTPAYVEEPAEHDVLLARI ARGEGMILLPASFSAIQRQGVVFCPVAEGDSMPLSLGVVYAPHQAESVQQWLSLLDDHLT TG >gi|289774416|gb|GG745516.1| GENE 20 21565 - 21936 623 123 aa, chain + ## HITS:1 COG:L35675 KEGG:ns NR:ns ## COG: L35675 COG0599 # Protein_GI_number: 15673958 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 9 120 7 118 122 112 48.0 2e-25 MSSERYITGQEMLQRVDGHGGEAVVDSLQDIAPDFARYLIEFPFGDIYARPGLDLRSREI ATIAALTALGNAAPQLKVHIAAGLNVGLTQEEITEVIMQMAVYAGFPAALNGLFAAKAVF AAH >gi|289774416|gb|GG745516.1| GENE 21 21974 - 24406 3006 810 aa, chain - ## HITS:1 COG:STM4101_1 KEGG:ns NR:ns ## COG: STM4101_1 COG0527 # Protein_GI_number: 16767367 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Salmonella typhimurium LT2 # 1 448 1 448 448 787 89.0 0 MSVIAQAGAKGRQLHKFGGSSLADAKCYLRVAGIMKEYSQAGDMMVVSAAGSTTNQLISW LKLSQSDRLAAHQVQQSLRRYQTELIGGLVEPAAADTLIAAFIHDLERLAGLLDGGVTEA VYAEVVGHGEVWSARLMAAVLNQLGMEAAWLDARAFLRAERAAQPQVDEGLSYPLLQQLM AQHPNKRLVVTGFISRNQAGETVLLGRNGSDYSATQIGALAGASRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYTPEQGSTRIER VLASGTGARIVTSHDDVCLVEFQVPASHDFKLAHKELDALLKRAQLRPLAVGVHADRKLL QFCYTSEVADSALKLLDEAGLPGELRLRQKLALVAMVGAGVTRNPLHCHRFWQQLKGQPV EFTWQSEEGISLVAVLRAGPTESLIQGLHQTLFRAEKRIGLMLFGKGNIGSRWLELFARE QTTLSARTGFEFVLAGVVDSKRSLLNYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPY DDLVVLDVTASEQLADQYLDFASHGFHVISANKLAGASSSDKYRQIHDAFEKTGRHWLYN ATVGAGLPVNHTVRDLIDSGDTILGLSGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGLT EPDPRVDLSGKDVMRKLVILAREAGYDIEPDQVRVESLVPAHCEEGSVDHFFENGEELNE QMLQRLEAAREMGLVLRYVARFDANGKARVGVEAVREEHPLAALLPCDNVFAIESRWYRD NPLVIRGPGAGRDVTAGAIQSDINRLAQLL >gi|289774416|gb|GG745516.1| GENE 22 24409 - 25569 1343 386 aa, chain - ## HITS:1 COG:metB KEGG:ns NR:ns ## COG: metB COG0626 # Protein_GI_number: 16131777 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 385 1 385 386 736 96.0 0 MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRA LAELEGGAGAVLTNTGMSAILLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVQ FVDQNDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICGLAREAGAVSVVDNTFLSPA LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIANDPATVTELAWWANNIGVTGGAFDSYL LLRGLRTLSPRMEVAQRNALAIVEYLKTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML SFELDGDEQTLRRFLSGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL RISTGIEDGEDLIADLENGFRAANEE >gi|289774416|gb|GG745516.1| GENE 23 25837 - 26154 541 105 aa, chain + ## HITS:1 COG:YPO0114 KEGG:ns NR:ns ## COG: YPO0114 COG3060 # Protein_GI_number: 16120460 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Yersinia pestis # 1 105 1 105 105 193 94.0 5e-50 MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE AFLHAFTGQPLPNDEDLRKERSDEIPEAAKEIMRELGIDPDTWEY >gi|289774416|gb|GG745516.1| GENE 24 26257 - 26469 385 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206578666|ref|YP_002241195.1| 50S ribosomal protein L31 [Klebsiella pneumoniae 342] # 1 70 1 70 70 152 100 5e-36 MKKGIHPKYEEITATCSCGNVMKIRSTVGHDLNLDVCGKCHPFFTGKQRDVATGGRVDRF NKRFSIPGSK >gi|289774416|gb|GG745516.1| GENE 25 26722 - 28917 2425 731 aa, chain + ## HITS:1 COG:priA KEGG:ns NR:ns ## COG: priA COG1198 # Protein_GI_number: 16131773 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Escherichia coli K12 # 1 731 1 732 732 1328 88.0 0 MPVAHVALPVPLPRTFDYLLPDGMTVKAGCRVRVPFGKQERIGIVAAVSERSELPLDELK PVAEALDDEPVFSGTVWRLLMWAAEYYHHPIGDVLFHALPILLRQGKPASATPLWYWFAT EQGQAVDLNGLKRSPKQQQALAALRQGKIWRHQVSELEFNEAALQALRGKGLAELACEAP VLTDWRSTYSVAGERLRLNTEQATAVGAIHSAADRFSAWLLAGITGSGKTEVYLSVLENV LAQGRQALVMVPEIGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI GTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGSATPAL ETLHNVRQGKYRQLTLSKRAGNARPAQQHVLDLKGQVLQAGLSPALINRMRQHLQADNQV ILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQCPSCGS THLVPVGIGTEQLEQSLTPLFPGVPISRIDRDTTSRKGALEEHLAAVHRGGARILIGTQM LAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHP EHPLLQTLLYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQ ASPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIVSGTLALINTLPEARKV KWVLDVDPIEG >gi|289774416|gb|GG745516.1| GENE 26 29068 - 30096 976 342 aa, chain + ## HITS:1 COG:STM4094 KEGG:ns NR:ns ## COG: STM4094 COG1609 # Protein_GI_number: 16767360 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 340 1 340 341 630 89.0 0 MKPKKQVVAATMKDVALKANVSTATVSRALMNPDKVSQATRNRVEQAALEVGYLPQSLGR NMKRNESRTILVIVPDICDPFFSEVIRGIEVTAAEHGYLVLIGDCAHQNQKEKTFIDLII TKQIDGMVLLSSRLPFDASVEEQRNLPPMVMSNEFAPELELPTVHIDNLTAAFNAVNYLH ELGHQRIGCIAGPEDMPLCHYRLQGYVQALRRSGITVDPHYIARGNFTFEAGANALEQLL SQPVPPTAVFCHSDVMALGALSLAKRRGLKVPDDLSIVGFDNIALSEFCDPPLTTVSQPR FDIGREGMLLLLEQMQGHNVNSGSRLLDCELIVRGSTQKIRR >gi|289774416|gb|GG745516.1| GENE 27 30304 - 31185 870 293 aa, chain + ## HITS:1 COG:STM4093 KEGG:ns NR:ns ## COG: STM4093 COG3087 # Protein_GI_number: 16767359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 293 39 324 324 278 73.0 1e-74 MVAIAAAVLVAFIGGLYFITHHKKEEAEAMQNRQAAGNGLPPKPEERWRYIKELESRQPG VRAPTEPTAGGEVMKPEQLTDEQRQLLAQMQADMRQQPTQLTEVPWNEQTPAQRQQTLQR QRLAQQQQQAQQQQWAQTQPQAVQQWAQTQPQAVQQQPRVQQPKPVQQQQPKQTASNQQP YQDLLQTPAHTNTTQPRTQAAAPVTRVEEAPKAAEKKDDRSWMIQCGSFKGAEQAETVRA QLAFEGFASHITTNNGWNRVVIGPLKGKESANEMITRLKMAGHANCIRLAARG >gi|289774416|gb|GG745516.1| GENE 28 31358 - 31807 569 149 aa, chain + ## HITS:1 COG:STM4092 KEGG:ns NR:ns ## COG: STM4092 COG5405 # Protein_GI_number: 16767358 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Salmonella typhimurium LT2 # 1 149 28 176 176 275 95.0 3e-74 MKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDR MLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTDMGARD IAEKALDIAGDICIYTNHFHTIEELPSKA >gi|289774416|gb|GG745516.1| GENE 29 31817 - 33151 1208 444 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 444 8 466 466 469 53 1e-131 MSEMTPREIVSELDKHIIGQDAAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAIKMVRMQSIDKNR YRAEELAEERVLDVLIPPAKNNWGQAEQPQEPSAARQAFRKKLREGQLDDKEIEIDLAAA PMGVEIMSPPGMEEMTSQLQSMFQNLGGQKQKPRKLKIKDAMKLLIEEEAAKLVNPEELK QEAIDAVEQHGIVFIDEIDKICKRGGNSSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKT DHILFIASGAFQVASPSDLIPELQGRLPIRVELKALTTHDFERILTEPNASITVQYKALM ATEGVNIEFTEDGIKRIAQAAWQVNETTENIGARRLHTVLERLVEDISYDASEMNGQTVI IDAEYVSKHLDVLVADEDLSRFIL >gi|289774416|gb|GG745516.1| GENE 30 33221 - 34141 1235 306 aa, chain + ## HITS:1 COG:ECs4857 KEGG:ns NR:ns ## COG: ECs4857 COG1575 # Protein_GI_number: 15834111 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Escherichia coli O157:H7 # 4 306 6 308 308 478 83.0 1e-135 MTDISRSRAWLESLRPKTLPLAFAAIIVGTTLAWQQGHFDPWVALLALITAGLLQILSNL ANDYGDAVKGSDKPDRIGPLRGMQKGVITPQQMKRALIVTVALICLFGLALLCAAWQSVG DFIGFLVLGGLSIVAAITYTVGTRPYGYIGLGDISVLVFFGWLSVLGSWYLQAHNVEAAI FLPATACGLLATAVLNINNLRDIDSDRQNGKNTLAVRLGPVNARRYHACLLLGALLCLAL FNLLALHSAWGWLFILATPLLVKQARYVLRESDPLAMRPMLEKTVKGALLTNLLFVIGII ASKLMA >gi|289774416|gb|GG745516.1| GENE 31 34234 - 34719 545 161 aa, chain + ## HITS:1 COG:STM4089 KEGG:ns NR:ns ## COG: STM4089 COG0684 # Protein_GI_number: 16767355 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 291 94.0 2e-79 MKYDTSELCDIYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGHI LLIDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEELDIGIQALAAIPVGAA GEGIGESDVRVNFGGVTFFSGDHLYADNTGMILSEDPLDIE >gi|289774416|gb|GG745516.1| GENE 32 34781 - 35743 1223 320 aa, chain - ## HITS:1 COG:ECs4841 KEGG:ns NR:ns ## COG: ECs4841 COG0205 # Protein_GI_number: 15834095 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 605 94.0 1e-173 MIKKIGVLTSGGDAPGMNAAIRGVVRAALTEGLEVFGIYDGYLGLYEDRMVQLDRYSVSD MINRGGTFLGSARFPEFREEHIRAVAIENMKKRGLDALVVIGGDGSYMGAMRLTEMGFPC IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA AAIAGGCEFIMVPEVEYTRDDLVAEIKAGIAKGKKHAIVAITEHMCDVDELASYIEKETG RETRATVLGHIQRGGSPVPYDRILASRMGAYAIELLLQGHGGRCVGIQNEKLVHHDIIDA IENMKRPFKNDWLDCAKKLY >gi|289774416|gb|GG745516.1| GENE 33 35940 - 36842 1010 300 aa, chain - ## HITS:1 COG:STM4061 KEGG:ns NR:ns ## COG: STM4061 COG0053 # Protein_GI_number: 16767327 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Salmonella typhimurium LT2 # 1 297 1 297 300 492 88.0 1e-139 MNQSYGRLVSRAAIAATAMASALLLIKIFAWWYTGSVSILAALVDSLVDIAASLTNLLVV RYSLQPADEEHTFGHGKAESLAALAQSMFISGSALFLFLTGIQHLVRPEPLQAAGVGVVV TLIALFSTLALVTFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILVALGLSWYGWHRADA LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQDIITIVTAWPGIRGAHDLRTRQSG PTRFIQIHLEMEDNLPLVQAHVIADQVEQAILRRFPGSDVIIHQDPSSVVPAAQQGFFER >gi|289774416|gb|GG745516.1| GENE 34 37002 - 37505 208 167 aa, chain - ## HITS:1 COG:STM4060 KEGG:ns NR:ns ## COG: STM4060 COG3678 # Protein_GI_number: 16767326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 166 169 80.0 2e-42 MRNVIAAVMASTLALSAYSQAAEVVTSVNWLPGDEGGQRGSQSHMFDGISLTEQQRQQLR DLMQRARHDRLPVNVSEMETMHRLVTAENFDENAVRAQAEKMAQEQVARQVEMAKVRNQM YHLLTPEQQAVLNAKHQQRMDQLREVARMQKGSAMMLSSSSNTLQPQ >gi|289774416|gb|GG745516.1| GENE 35 37655 - 38353 844 232 aa, chain + ## HITS:1 COG:STM4059 KEGG:ns NR:ns ## COG: STM4059 COG0745 # Protein_GI_number: 16767325 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 395 96.0 1e-110 MNKILLVDDDRELTSLLKELLDMEGFNVLVAHDGEQALALLDDSVDLLLLDVMMPKKNGI DTLKELRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHW SEQQQTTEAGSPTLEVDALSLNPGRQEANFDGQTLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGHPWFKTLRGRGYLMVSAS >gi|289774416|gb|GG745516.1| GENE 36 38350 - 39723 1526 457 aa, chain + ## HITS:1 COG:STM4058 KEGG:ns NR:ns ## COG: STM4058 COG0642 # Protein_GI_number: 16767324 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 457 1 457 457 792 95.0 0 MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLESEQRQGIMIEQHVEAELAND PPNDLMWWRRLFRAIDKWAPPGQRLLLVTSEGRVIGAERNEMQIIRNFIGQADNADHPQK KRYGRLEMVGPFSVRDGEDNYQLYLIRPASTSQSDFINLLFDRPLLLLIVTMLVSAPLLL WLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQ RLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAHRLDSMINDLLVMSRNQAK NALVSETVKANQLWGEVLDNAAFEAEQMGKSFTVEYPPGPWPLYGNPNALESALENIVRN ALRYSHTKISVSFSVDKDGITVNVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLG LAIVETAIQQHRGWVKADDSPLGGLRLTLWLPLYKRT >gi|289774416|gb|GG745516.1| GENE 37 39788 - 40462 557 224 aa, chain - ## HITS:1 COG:STM4056 KEGG:ns NR:ns ## COG: STM4056 COG2258 # Protein_GI_number: 16767322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 223 22 244 250 411 84.0 1e-115 MHYPVNVFVGKIRDYAGSRPSAIGKIQVDGELQLGDLGLDGDEQAEKKIHGGPDRALCHY PREHYADWMREFPQQAERFCAPAFGENLSTTGLTEQNVYIGDIFRWGEALIQVTQPRSPC FKLNFHFAIGDMAQLVQNSGKTGWLYRVIAGGQVSSDAPLELVSRLSDVSVHEAGAIAWQ MPFDDDQYHRLLSAAGLSVSWSRTLQKRRLSGKIEDSSRRLWGK >gi|289774416|gb|GG745516.1| GENE 38 40535 - 41155 579 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 206 1 201 201 227 55 2e-58 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLSAEELITK LDQLPADKKTVLRNNAGGHANHSLFWKGLKTGTTLQGDLKAAIERDFGSVDNFKAEFEKA AATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQN RRPDYIKAFWDVVNWDEAAARFAAKK >gi|289774416|gb|GG745516.1| GENE 39 41445 - 42479 1642 344 aa, chain + ## HITS:1 COG:STM4050 KEGG:ns NR:ns ## COG: STM4050 COG0697 # Protein_GI_number: 16767316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 344 1 344 344 571 92.0 1e-163 MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPD FWAYYRSFNASTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI INGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM CGIFSAGMSFAMNAAKPMHDAAAALGVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYV LCGGVVGLVLKEWNNAGRRPVSVLSLGCVVIIIAANIVGLGMAS >gi|289774416|gb|GG745516.1| GENE 40 42512 - 43357 770 281 aa, chain - ## HITS:1 COG:STM4049 KEGG:ns NR:ns ## COG: STM4049 COG2207 # Protein_GI_number: 16767315 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 4 277 5 278 282 424 74.0 1e-118 MAGLILRKEEFFPSATQAVAVADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPWRIT RGDLFYIRAEDKHSYASVNDLVLQNIIYCPERLQLNFDWAGTIPGLFGTPWKPHWRMGST GMAQARQVISQLEHECARRDAQGNAMAELLFAQLALTLQRHRYATDDPAATQREALLDKL LAALAASLSRPFVLERFCEQEGGSERALRQQFRQQTGMTINHYLRQLRICHAQYLLQHTE RLIGDIAMQCGFEDSNYFSVVFSREIGMSPGQWRQRSRAAA >gi|289774416|gb|GG745516.1| GENE 41 43431 - 44267 933 278 aa, chain - ## HITS:1 COG:STM4048 KEGG:ns NR:ns ## COG: STM4048 COG2207 # Protein_GI_number: 16767314 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 278 1 278 278 459 82.0 1e-129 MTILHSTDFFKAGISTVAIEPRLPQSAFPEHHHDFHEIVIVEQGTGIHVFNGQPYTIGGG SVCFIRDHDRHLYEHTDNLCLTNVLYRAPDAFRFLAGVSQLLPQEQEGNYPSHWRVNQTV LQQVRHIVAQMEAMGSETDTHAVASREILFMQLLVLLRKSSLAEEATNNDARLNQLLAWL EDHFAQEICWEEVAAQFSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLRHSDESVT DIAFRCGFGDSNHFSTLFRREFDWSPRDIRQGRDAILQ >gi|289774416|gb|GG745516.1| GENE 42 44578 - 46044 1898 488 aa, chain + ## HITS:1 COG:STM4047 KEGG:ns NR:ns ## COG: STM4047 COG1070 # Protein_GI_number: 16767313 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Salmonella typhimurium LT2 # 1 488 1 489 489 817 79.0 0 MSIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEI RRGLEKVCEQGILIDSIGIDTWGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEEQLGR AEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLIPDYFSFRLTGNLNWEYTNAT TTQLVNINSDSWDETLLNWTGAPLAWFGTPTHPGNVIGHWICPQGNRIPVVAVASHDTAS AVIASPLADRDAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGL WLLQRVLKEQNVSDLQGLIARTAALPACRFMIDCNDDRFINPASMSAEIQAACRDAGQPV PESDAELARCIFDSLALLYARVLNELAALRGQPFSQLHIVGGGCQNALLNQLCADACGIA VVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRDNAALTAFTPNPDSEIARFVAQFQP QQTKELCA >gi|289774416|gb|GG745516.1| GENE 43 46041 - 47300 1698 419 aa, chain + ## HITS:1 COG:STM4046 KEGG:ns NR:ns ## COG: STM4046 COG4806 # Protein_GI_number: 16767312 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Salmonella typhimurium LT2 # 1 418 1 418 419 812 91.0 0 MTTQLEQAWEIAKQRYAAVGVDVEEALRQLDRLPVSMHCWQGDDVAGFENPAGSLTGGIQ ATGNYPGKARNAEELRADLEQALSLIPGPKRLNLHAIYLESDAPVARNEIKPEHFKNWVT WAKANKLGLDFNPSCFSHPLSADGFTLSHANDEIRQFWIDHCKASRRVSAYFGEQLGTPS VMNIWVPDGMKDITVDRFAPRQRLLNALDEVISEKLDPAHHIDAVESKLFGIGAESYTVG SNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYIPRLLLHVSRPVRWDSDHVVL LDDETQAIASEIIRHNLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAQL RQLENDGDYTARLALLEEQKSLPWQAIWEMYCQRHDTPAGSQWLDNVRAYENTVLSQRG >gi|289774416|gb|GG745516.1| GENE 44 47452 - 48282 1357 276 aa, chain + ## HITS:1 COG:STM4045 KEGG:ns NR:ns ## COG: STM4045 COG0235 # Protein_GI_number: 16767311 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 518 89.0 1e-147 MQTIIDAWFVQGMIKATSDAWLKGWDERNGGNLTLRLDEADIEPYAADFHAKPRYIALSQ PMPILANQPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGYHILWGLTEDAVPTSELPA HFLSHSERIKLTGGKDRVIMHCHATNLIALTYVLENHSDLFTRKLWEGSTECLVVFPDGV GILPWMVPGTDEIGQATAETMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAEVLVK VLSMGGMKQTITREELIALGKRFNVQPLQSALDLYP >gi|289774416|gb|GG745516.1| GENE 45 48364 - 49350 1430 328 aa, chain + ## HITS:1 COG:AGl2685 KEGG:ns NR:ns ## COG: AGl2685 COG1879 # Protein_GI_number: 15891450 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 328 23 353 353 385 66.0 1e-107 MKTKTSLILTVAALALSGSALAEVKIALVAKSLGNGFFEAANVGAQQAAKELGDVKVIYT GPTTTTAEAQIDVLNGLIAQGVDAIAISANDPDAVVPVLKKAMQRGIKVVSWDSGVAPAG RQIHLNPSNNALIGETNVKLAADALKALNVEKGEVAVLSATPTSTNQNIWIEEMKKVLPQ YPSVQLVTVAYGDDLSDKSYREAVGLLKSYPDLKVIVSPSSVGIVAAAQAVKDQGKIGKV YVTGLGLPSEMAGAIKSGASKSFAIWNPIDLGYAATYLADDLVKGTATKTEASMGKLGKV KLDAEGNGAMAEPFVYDASNIDKFSKIF >gi|289774416|gb|GG745516.1| GENE 46 49497 - 51008 171 503 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 257 499 140 364 398 70 26 3e-11 MSASTPLLSLKGITKIFPGVRALENVQLDLWPGKVTALIGENGAGKSTLVKVMTGIYQPE EGEILYKAIPIHLPTPESAHKVGITAIHQETVLFDELSVSENIFVGQYLYKGLLKTLDWP AMHRRASEILTRLEVQIDPRATLKTLSIAQRHMVAIARALAFDAQVVILDEPTAALSQHE ILEFYHIVERLKQDGKAILFISHKFDEIFELADYYTILRDGVYVSSGAISDITEERMVSM MVGRAITQTYPKIDCTPGETVLEVTDLCHPTEFAHISFRLRKGEILGFYGLVGAGRTELM QALSGVSRPSSGEIRLNGSPMRFRQPADAIRAGIVCVPEERQKQGAIIALPIAQNISLPQ LSKLNPNGILNDAREWRLADEYASRLQVKAFSWRQPVETLSGGNQQKVVIGKWLATHPEV IILDEPTKGIDIGSKAAVHQFMSELVSQGLAVIMVSSELPEVMGMADRIIVMHEGLMVAE YQAGEATAETIVSAASGIGQEAA >gi|289774416|gb|GG745516.1| GENE 47 51008 - 52012 1319 334 aa, chain + ## HITS:1 COG:mll5704 KEGG:ns NR:ns ## COG: mll5704 COG1172 # Protein_GI_number: 13474747 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 4 326 3 325 325 315 57.0 5e-86 MGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLT KGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGMINGLLVWRLGIPAI VVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSTLMGLPLLSWCAIAALLLVGYF LRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVDV ANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGAV IVMAVLLNERGNRGHGRLILRNAALARQKQAVKS >gi|289774416|gb|GG745516.1| GENE 48 52009 - 53013 1473 334 aa, chain + ## HITS:1 COG:SMc03001 KEGG:ns NR:ns ## COG: SMc03001 COG1172 # Protein_GI_number: 15964386 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Sinorhizobium meliloti # 21 331 21 331 334 341 65.0 9e-94 MSKMMVSEEMKNAPAAPSPLRRLLCWEGFLLAVTLAVFIGNAVASPYFLNIWNLSDATFT FTEKAIVVLPMAMLIIAREIDLSVASTMALSSTVMGFCAAAGVDTPLLVIIGLGVGLLCG LFNGLLVTRFNLSSIVITIGTMSLYRGITYILLGDQALNHYPESFAWFGQGYVWGALSFE FALFILLAAAFTFLLHKTNFGRRTYAIGNNPTGAWFSGINVKRHNLVLFALVGLMAGLAA VLLTSRLGSTRPTLAMGWELAVVTMAVLGGVNILGGSGSMPGVIIAAFLMGLVTFGLSLL NVPGIVMSVIIGAMLIVVISLPIITRRMMQRRRC >gi|289774416|gb|GG745516.1| GENE 49 53171 - 54319 1705 382 aa, chain + ## HITS:1 COG:STM4044 KEGG:ns NR:ns ## COG: STM4044 COG1454 # Protein_GI_number: 16767310 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 1 382 1 382 382 649 90.0 0 MSFMLALPKISLHGAGAIGDMVKLVAGKQWGKALIVTDGQLVKLGLLDSLFSALDKQQMA YQLFDGVYPNPTEALVQQGYAAYQAARCDYLIAFGGGSPIDTAKAIKILTANPGPSTAYS GVGKVKNAGVPLVAINTTAGTAAEMTSNAVIIDSERQVKEVIIDPNLIPDIAVDDASVML DIPPAVTAATGMDALTHAIEAFVSVGAHPLTDANALEAIRLINLWLPKAVDDGHDLQARE QMAFGQYLAGMAFNSAGLGLVHALAHQPGATHNLPHGVCNAILLPIIENFNRPNAVARFA RVAQAMGVDTRGMNDEAASMEAINAIRALSKRVGIPQGFSQLGVSKADIEGWLDKALADP CAPCNPRSASRDEVRELYLEAL >gi|289774416|gb|GG745516.1| GENE 50 54337 - 54630 322 97 aa, chain + ## HITS:1 COG:STM4043 KEGG:ns NR:ns ## COG: STM4043 COG3254 # Protein_GI_number: 16767309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 96 8 103 104 162 88.0 1e-40 MQVNPDAHEEYQRRHNPIWPELEAVLKDHGAHHYAIYLDKERHLLFATVEIESEARWEAV ASTEVCQRWWKYMREVMPSNPDNSPLSAELKEVFYLA >gi|289774416|gb|GG745516.1| GENE 51 54668 - 55933 1709 421 aa, chain - ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 11 415 6 410 417 436 60.0 1e-122 MNPTVCTHKNNPNFWIFGLFFFLYFFIMATCFPFLPIWLSDVIGLNKTETGLVFSSLSLF AICFQPVLGVISDKLGLKKHLMWIVTVLLVLIAPFFLYVFAPLLKTNIWLGALSGGAYIG FVFSAGAGAMEAYIERVSRNSGFEYGKARTFGCLGWALCATTAGMLFSINPEWVFWMGSA AALLLVVLVAIAKPQASQSAQVMDSLGANRPAIDLKTAVRMFRQRKMWMFILYVIGVACV YDVFDQQFATFFKSFFATPEAGTRAFGFATTAGEICNAIIMFSSPWIINRIGAKNTLLIA GMVMAARMIGSSFATTAAEVVALKMLHALEVPFLLVGAFKYITGVFDVRLSATIYLVGFQ FAKQVAAIFLSAFAGNMYDRIGFQDTYMILGGIALTVTLISAFTLAGKAKTEPLRDNAMT V >gi|289774416|gb|GG745516.1| GENE 52 55975 - 58098 2798 707 aa, chain - ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 1 707 1 707 708 902 59.0 0 MSDSLIHLQSAGADVVIKTRPFAEIVYWGPHLSHFSPQDADSLTRPVANGRLDVDSPVTL MAELGHGLFGAPGIEGHRQGLDASPLFTTSEVRHEGQTLTLVSEDPQAGLRLHSEIALDA SGVLSVRHGVTNLRASPWQVDRLAVTLPVAERAREVMAFHGRWIREFQPHRLTLEHDSFV LENRRGRTSHEHFPALITGSRAFSEMQGEVWGVHLAWSGNHRLRAEVKTDGRRYLQAEAL YLPGEMALAEGETLWTPYLYASYSANGLNGMSQQFHRYLRERIIRFPGNKPRPVHLNTWE GIYFDHDPDYIMRMADEAAALGVERFIIDDGWFKGRNDDWAALGDWYLDEKKYPYGLTPV IDHVKSLGMEFGIWVEPEMINPDSDLYRAHPDWVLALPGYTPLTGRHQFVLNLNIPEAFD YLLERMSWLLGEHAVDYVKWDMNRELVQPGHQGRAAADAQTRQFYRLLDTLVARFPHIEF ESCSSGGGRIDYEVLKRSHRFWASDNNDALERNTIQRGMSYFFPPEVMGAHIGNRHCHAT FRQHSIAFRGLTALFGHMGLELDPVSADEEERAGYRKYAALHKQWRDVIHHGVQWRMDMP DATTLAHGVVSPDKAQAIFLVSQLAMPDYTLMAPLRLAGLEANARYQVTLLDHPNIQITG EGGHTMRKLPAWMTTPQTVSGEWLQQAGLALPILDPESAILIGLQRV >gi|289774416|gb|GG745516.1| GENE 53 58214 - 59209 883 331 aa, chain - ## HITS:1 COG:SMc03060 KEGG:ns NR:ns ## COG: SMc03060 COG1609 # Protein_GI_number: 15964447 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 326 3 332 356 162 34.0 8e-40 MSLKAIAKQLGISVTTVSRALNGYDDVSQETRARVEAEAQRRGYRPNTFARRLKMGTIDA VGLVFPVRPAPLNNNVFLEMVGEISHELARHDIDLLLIADDEQADKHGYMRMVQGRRVDA LIVAHTLDDDPRLAQLQASGFPFLALGRSRLAQPYAWFDFDNYAGTCRATRHLIQQGHQR IALLGENNNQAFILQRRNGYLDALREAGLSDAWLRSVPATRRGGYQATLELLRLPEPPTA IITDCNTHGDGAAMALAHLGRLTGDNRVALVVYDGLPQDSIIETDVAAVIQSTRQGVGRQ IADMVRRLIAGEDLASLQVLWQPEFIPGETA >gi|289774416|gb|GG745516.1| GENE 54 59297 - 59845 633 182 aa, chain - ## HITS:1 COG:STM4042A KEGG:ns NR:ns ## COG: STM4042A COG1396 # Protein_GI_number: 16767308 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 182 7 188 188 322 91.0 3e-88 MTQPISVIAKSLVRERARTGLSLAEVARRAGIAKSTLSQLESGNGNPSLETLWSLCVALD IPFARLLEPQVNKTQVIRRGEGTKVVAEQANYQAILLAACPPGARRDIYLLLTQPGADRI SHPHPPGSVEHIIVTQGRARVGLTSAPEELGEGDYICYPADQEHVFQALEPDTQALLIAE QN >gi|289774416|gb|GG745516.1| GENE 55 59916 - 60605 704 229 aa, chain + ## HITS:1 COG:STM4042 KEGG:ns NR:ns ## COG: STM4042 COG1296 # Protein_GI_number: 16767307 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Salmonella typhimurium LT2 # 11 229 1 219 219 283 85.0 2e-76 MGNRSIWLSDMKQTLSSLSGDTIKAIVLVCLAVGVVGMSYGSLAVAYGFPLWVPLLLSVS VLAGASEFMFIGIIASGGSPLAAAAAGLLVNARHIPFGVTVRELVGRRALSFIGCHIMND ESVVFGLSQPTPAQRKAAYWLCGAGVALIWPLGTLTGAAVGKLLPAPETIGLDAVFPAIL LALVIPAFKNRTTLIRAASGAALALAAVPFVPTGLPVLLSLFGLLSRKK >gi|289774416|gb|GG745516.1| GENE 56 60605 - 60928 611 107 aa, chain + ## HITS:1 COG:no KEGG:Kvar_5022 NR:ns ## KEGG: Kvar_5022 # Name: not_defined # Def: branched-chain amino acid transport # Organism: K.variicola # Pathway: not_defined # 1 107 1 107 107 143 100.0 2e-33 MGNMTLFIAGIAILSLGTYLMRLGGAKLGNRLAFSERSQALLSDAATVLLFSVALATTFY EGAHFAGMARVLGVAVAVFLAWRKVPLIGVIIAAAVVTALLRLAGMP >gi|289774416|gb|GG745516.1| GENE 57 60925 - 61518 307 197 aa, chain - ## HITS:1 COG:mlr3412 KEGG:ns NR:ns ## COG: mlr3412 COG1940 # Protein_GI_number: 13472953 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Mesorhizobium loti # 4 186 294 481 482 189 47.0 4e-48 MNRHLTPGCKTAILINGIPASGKSTITRLLAETFSLPVLTIDGIKEPFMARLAPVDRPMN RQLGCAAYEVIWSIVGASPASMVWLIDAWFGFQPRETLQRLLQQAGVEQVIEIWNHITPE LAVARYASRLATRPPGHPGEEYLPELAQLAGRAQPMSLGPVLTIDQRYPLEIKPIIHWLE GTIAGKHAGLADYAYPP >gi|289774416|gb|GG745516.1| GENE 58 61515 - 61952 484 145 aa, chain - ## HITS:1 COG:SP2036 KEGG:ns NR:ns ## COG: SP2036 COG1762 # Protein_GI_number: 15901857 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 145 1 145 161 116 35.0 2e-26 MTIKELLIEADAIQVGVVESDWQRVIKLAARPLEAKGFISAEYSQAVIDNTLNHGAYYVF DEGIAIPHARPECGVRRNCFSLVVLKKPIPFADSEKADIVIMFGARDSNAHIEEGIRSIV ALLDNNDTMAKLRTARSREEVVALL >gi|289774416|gb|GG745516.1| GENE 59 61962 - 62231 394 89 aa, chain - ## HITS:1 COG:no KEGG:KP1_0054 NR:ns ## KEGG: KP1_0054 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 89 13 101 101 148 100.0 6e-35 MFESLKTLWKKEQNPLQDYDQQSRQLAEEIARLEGELQRQPDNSDVQKTLMLTYNRALSV YAKSKSHRQDIDALFLQIDNLRNIIRRNI >gi|289774416|gb|GG745516.1| GENE 60 62290 - 63132 670 280 aa, chain - ## HITS:1 COG:BH3786 KEGG:ns NR:ns ## COG: BH3786 COG0191 # Protein_GI_number: 15616348 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Bacillus halodurans # 1 279 1 281 287 189 38.0 7e-48 MSLYNFNEILNIAQERNFKAIGSFNLHCIEMLPAFFKAAQNSHSPLMIQISTGTAEYLGY RLLVDAVRSLADSENIPTCLHLDHCSDIKAIETAMNAGFSSVMYDGSHLSLEENIGNTRI VVEMARPRNITVEGELGAIGGSEDGKAVAAEDICFTTVDDAKRFVEETQVDMLAVSVGTV HGLYTGKAQIQHARLKAISEATGVPLVLHGGTGVSDDDMRLAVTEGINKVNVGTEMNVQW VDRCKSTFEKGKVNDSVRKFLIPANQAVTAVLMEKMALFK >gi|289774416|gb|GG745516.1| GENE 61 63119 - 64486 1714 455 aa, chain - ## HITS:1 COG:YPO2782 KEGG:ns NR:ns ## COG: YPO2782 COG3037 # Protein_GI_number: 16122986 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 415 3 414 418 339 44.0 8e-93 MNSFVAFIVKDLLGQASILIAFIAMLGLILQKKSLGKTAEGTFKTLLGFLIMMAGINIIV ATLTFLNDIFTQGFGMKGYITDVAAIAGLANRELGSEVALTLLVIFAVNIIIARLTPLKY IFLTGQALLWMATIGAVIGYKSGLTGVPLILTGGIFGGVMAVLMPALAQPVVRRITGSDD VALGHFCTIGYLVQAAVAKVVGKGSRSTEDLELPDNFKFLQDTYLAMAVVMVPMYLIPAI AAGPQYIAQFSGGINYLMYAFMQSIQFVAGVFVLYSGVRLLLNELVPAFRGIAMRIVPDA KPALDCPVLFPYAPNAVIVGFLATTVGSIIGMLVFPMFGLAMILPGLLTNFFAGGTAGVF GNALGGRRGAMIGGVIHGLFITFLPAILVPMLESYGFTGVTFSDSDVISSGLVLGHAFQN NWLFVALFIVFVAALAWFVNGKSAKPKGENVHESV >gi|289774416|gb|GG745516.1| GENE 62 64479 - 64793 395 104 aa, chain - ## HITS:1 COG:STM2343 KEGG:ns NR:ns ## COG: STM2343 COG3414 # Protein_GI_number: 16765670 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 2 96 1 90 90 64 41.0 5e-11 MLKILCVCGCGLGSSFAIEMTAKAVLKKLEIPAHIEHTTVSEAGAFKSDMILTQKTFADI LTADASEEEIKRVVVLNKLTDKEEIETKIVAFLKERHLKVADYE >gi|289774416|gb|GG745516.1| GENE 63 64805 - 65785 699 326 aa, chain - ## HITS:1 COG:MPN302 KEGG:ns NR:ns ## COG: MPN302 COG0205 # Protein_GI_number: 13508041 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Mycoplasma pneumoniae # 2 302 8 305 328 134 32.0 3e-31 MKIGIVISGGDVSGMNNFIFQVARQANADITLFNGGIPGLLEKSHQDMAWRDLVDFSITA VPIITSGRTSRKLQRSEYESIAKKLKSLRIDVLIMAGGDGSLQFLNTLSEFEINCFGVGM TIDNDVYGSDYTIGFSTACEQIIKEVSRLRNTGRALPGRVFMVEILGGYCGELTLQSAIK CNADIALIPEAQMPLTMLAERITRKLSMQNSVVILCSEGYTKEYSPGFQGAIDTMIKQLE PQIGVRIRKTIVGYGLRSGDPTCEEIYQGTIMASEVVRCIQSGMKNKAIIINSSNKPIPI DLVSMKKRLVDTEGHHYKLAKQLNII >gi|289774416|gb|GG745516.1| GENE 64 66180 - 66392 250 70 aa, chain - ## HITS:1 COG:no KEGG:ECL_05087 NR:ns ## KEGG: ECL_05087 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 70 1 70 70 67 90.0 2e-10 MKSIKTFVAVIALAASFGSFAAETVTATAATMDGAEAKIAAQAQAAGASSYKITEAFTGN RVHMTAELNK >gi|289774416|gb|GG745516.1| GENE 65 66521 - 67357 585 278 aa, chain - ## HITS:1 COG:fdhD KEGG:ns NR:ns ## COG: fdhD COG1526 # Protein_GI_number: 16131735 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Escherichia coli K12 # 1 275 1 275 277 479 83.0 1e-135 MNKKPLEQIKNVTNVTGYRQVSLWKREDLQHPQPDELAEEIPVALVYNGISHVVMMATPK DLEQFAVGFSLSEGIIEHRREIFGMDVVSVCNGLEVQIELSSRRFMGLKARRRALAGRTG CGVCGVEQLNDIGKPVQPLPFTQTFDLANLDHSLAHLNDFQPVGRLTGCTHAAAWVRTTG ELAGGFEDVGRHVALDKLLGQRAEIGEDWQHGAALVSSRASYEMVQKAAMCGVEILFAVS AATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLIAG >gi|289774416|gb|GG745516.1| GENE 66 67514 - 68101 493 195 aa, chain + ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1016 397 95.0 1e-111 MQVSRRQFFKICAGGMAGTTAAALGFAPATALAETRQYKLLRTRETRNTCTYCSVGCGLL MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK WQQISWDEAFDRIAKLMKEDRDANFIAQNDAGTTVNRWLTTGMLCASASSNETGYLTQKF TRALGMLAVDNQARV >gi|289774416|gb|GG745516.1| GENE 67 68150 - 70564 3176 804 aa, chain + ## HITS:1 COG:STM4037 KEGG:ns NR:ns ## COG: STM4037 COG0243 # Protein_GI_number: 16767302 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 804 213 1016 1016 1583 93.0 0 MTNHWVDIKNANLIVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTASVADFY TPIRSGTDITFLSGVILYLLNNEKFNREYTEAYTNASLIVREDYSFDDGLFSGYNAEKRQ YDKTSWNYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKADFLKVCE YIAETSAPDKTASFLYALGWTQHSIGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYMSLPNEKQADLQTYLTANTPKPLLKDQVNYWGNYPKFFVSMMKAF FGDKATAENSWGFDWLPKWDKSYDVLQYFEMMNQGKVNGYICQGFNPVASFPNKNKVVAS LSKLKFLVTIDPLNTETSTFWQNHGESNDVDPSKIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGIAVTDGEILAGIFTRLRKMYAEEGGPAPEPVLNMTWNYSTPHEPASEE VAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSSGCWIFAGSWTPDGNQMA RRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGKPWDPKRQLLKWDGAKWGGVDIP DYSAAAPGSDVGPFIMQPEGMGRLFAIDKMAEGPFPEHYEPFETPLGTNPLHPNVVSNPA ARVFKGDLEQMGKADKFPYVGTTYRLTEHFHYWTKHALLNAIAQPEQFVEIGEKLANKLG IGHGDTVKVSSNRGYIKAKAVVTKRIRTLKVDGKDIDTIGIPIHWGYEGVAKKGFIANTL TPFVGDANTQTPEFKAFLVNVEKV >gi|289774416|gb|GG745516.1| GENE 68 70577 - 71479 1219 300 aa, chain + ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 300 1 300 300 599 93.0 1e-171 MAYQSQDIIRRSATNGFTPAPQARDHQQEVAKLIDVTTCIGCKACQVACSEWNDIRDEVG HNVGVYDNPADLTAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCADPGCLKACPSEGAIIQ YANGIVDFQSEQCIGCGYCIAGCPFDVPRLNPEDNRVYKCTLCVDRVTVGQEPACVKTCP TGAIHFGSKEDMKTLAGERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL PENPEISQTVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRAEEEEDNLHEEKDEVRK >gi|289774416|gb|GG745516.1| GENE 69 71476 - 72111 709 211 aa, chain + ## HITS:1 COG:STM4035 KEGG:ns NR:ns ## COG: STM4035 COG2864 # Protein_GI_number: 16767300 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 377 94.0 1e-104 MKRRDTIVRYTAPERINHWVTAFCFVLAAVSGLGFFFPSFNWLMHILGTPQLARILHPFV GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII LLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA MVEGWVTKTWAKKHHPRWYREVRQKQEKSSE >gi|289774416|gb|GG745516.1| GENE 70 72108 - 73037 1301 309 aa, chain + ## HITS:1 COG:STM4034 KEGG:ns NR:ns ## COG: STM4034 COG3058 # Protein_GI_number: 16767299 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 595 94.0 1e-170 MSIRIIPQDELGSSEKRTAEAIPPLLFPRLKNLYNRRAERLRELAANNPLGDYLRFAALI AHAQEVVLYDHPLQMDLTARIKAASEQGKPPLDIHVLPRDKHWHKLLHSLIAELKPEMSG PALAVIENLEKASEQELEQMASALFVSDFASVSSDKAPFIWAALSLYWAQMASLIPGKAR AEYGEQRQFCPVCGSMPVSSIVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSRDLHY WSLDNEQAAVKAESCGDCGTYLKIMYQEKDPKVEAVADDLASLVLDARMEQEGFARSSIN PFMFPGEGE >gi|289774416|gb|GG745516.1| GENE 71 73211 - 73594 240 127 aa, chain - ## HITS:1 COG:no KEGG:KPK_5496 NR:ns ## KEGG: KPK_5496 # Name: not_defined # Def: PIN domain protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 127 1 127 127 247 100.0 1e-64 MTSGSALFDTNILIDLFSGRREAKQALEAWPPQNAISLITWMEVMVGAKKYHQEQRTRMA LSTFNIINISQDIAERSVALRQEYKLKLPDAIILATAQLHRLELITRNTKDFAGIPGVVT PYELHPE >gi|289774416|gb|GG745516.1| GENE 72 73594 - 73836 266 80 aa, chain - ## HITS:1 COG:no KEGG:Kvar_5038 NR:ns ## KEGG: Kvar_5038 # Name: not_defined # Def: CopG domain protein DNA-binding domain protein # Organism: K.variicola # Pathway: not_defined # 1 80 3 82 82 117 100.0 1e-25 MMAERDMGRILLDLSDDVIQRLDDLKVQRNIPRAELLREAVEQYLEKQDRAKDTISSALG LWQDCEEDGMEYQRQLRKEW >gi|289774416|gb|GG745516.1| GENE 73 74041 - 74958 751 305 aa, chain + ## HITS:1 COG:STM4032 KEGG:ns NR:ns ## COG: STM4032 COG0657 # Protein_GI_number: 16767297 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Salmonella typhimurium LT2 # 1 303 1 303 309 476 76.0 1e-134 MALEKGIASLVEAFIAAGRPSSRDQHIDDRRAGYIASAVLAGETETRVRVEDTTLEGMHF RVVSPPTADGLLPTLIYYHGGCFVSGGFTTHDNQLRQLAMFSGCRVIAVQYRLAPEHTFP AAHDDAERGATIIHRHAEQLGIDASRITLAGDSAGGHLALVTALRLKAKAAWHPAQLILI YPMLDPTASMASYLSNGDDYVITRDTLLSGYEMYLASTPANHPDASPLWREDFNGLPPVH ILTAEFDPLRDEGEVLYRRLTEQGVESSCQRYLGVIHGFFQLGGVSHAARDAMRDIAWRV ASPGR >gi|289774416|gb|GG745516.1| GENE 74 74973 - 75914 1137 313 aa, chain - ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 313 17 329 329 590 93.0 1e-168 MYHLRVPQTAEELESYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEEGNLVAVGR LYINAENEASIRFMAVHPSVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKL GFVNQGEITTPTTTPIRHFLMIKPIASLDDILHRGDWCAQLQQAWYQHIPLSEKMGVRIQ QYTGQKFITTMPEAGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHI RYSQPISGRPSAIADLGSLSGDLDRLARGRKARVQMQVELFGDDKQGAVFEGIYIVLPAK PFGSYEEGGNEEE >gi|289774416|gb|GG745516.1| GENE 75 75959 - 76396 228 145 aa, chain - ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 266 95.0 1e-71 MIALIQRVSRASVTVEDEVTGEIGPGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDADG KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGAAPDRAEALYEYFVARCRQQEMNT QTGRFAADMQVSLVNDGPVTFWLQV >gi|289774416|gb|GG745516.1| GENE 76 76393 - 77253 914 286 aa, chain - ## HITS:1 COG:ECs4809 KEGG:ns NR:ns ## COG: ECs4809 COG1295 # Protein_GI_number: 15834063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 286 1 290 290 446 83.0 1e-125 MLKTVQQKLHHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAA FPMFSEVSVQIRHFIFANFIPATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSI DSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNL LRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP >gi|289774416|gb|GG745516.1| GENE 77 77247 - 77846 711 199 aa, chain - ## HITS:1 COG:STM4026 KEGG:ns NR:ns ## COG: STM4026 COG1011 # Protein_GI_number: 16767291 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 199 1 199 199 348 82.0 4e-96 MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLATLKQHFTMGEAFHQHERGEISDEDFAAA MCHEMNMSLSYEQFAHGWQAVFVALRPEVITIMHKLRAQGHRVVVLSNTNRLHTTFWPDE YPEVRAAADRIYLSQEMGLRKPEAEIYLRVLEEEGFSAADTVFFDDNVDNIAGANRLGIT SILVTGKKTIPDYFANQLC >gi|289774416|gb|GG745516.1| GENE 78 77981 - 79804 2123 607 aa, chain - ## HITS:1 COG:STM4009 KEGG:ns NR:ns ## COG: STM4009 COG1217 # Protein_GI_number: 16767274 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Salmonella typhimurium LT2 # 1 607 1 607 607 1168 96.0 0 MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKN TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA DDMTPLYQAIVDRVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTII DSEGKTRNGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPAL SVDEPTVTMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALG ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV GQRNNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG KKLTNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRA MRGAKEE >gi|289774416|gb|GG745516.1| GENE 79 79757 - 79852 64 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVNVRDDGDITQIFDHNFASGIRNSALLYTY >gi|289774416|gb|GG745516.1| GENE 80 80183 - 81592 1544 469 aa, chain + ## HITS:1 COG:STM4007 KEGG:ns NR:ns ## COG: STM4007 COG0174 # Protein_GI_number: 16767272 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Salmonella typhimurium LT2 # 1 469 1 469 469 927 95.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPSHQVNAEFFEEGKMFDGSSIGGWKG INESDMVLMPDASTAVIDPFYEEPTLIIRCDILEPGTLQGYDRDPRSIAKRAEEYLRATG IADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGY FPVPPVDSSQDIRSTMCMIMEEMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALFYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVTSPKARRIEVR FPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALQ ALDADREFLTAGGVFTNDAIDAYIALRLEENDRVRMTPHPVEFELYYSV >gi|289774416|gb|GG745516.1| GENE 81 81781 - 82830 1074 349 aa, chain + ## HITS:1 COG:STM4006 KEGG:ns NR:ns ## COG: STM4006 COG3852 # Protein_GI_number: 16767271 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Salmonella typhimurium LT2 # 1 349 1 349 349 627 93.0 1e-180 MATGTLPDAGQILNSLINSILLVDDDLAVHFANPAAQQLLAQSSRKLFGTPLPELLSYFS LNIGLMQESLQAGQGFTDNEVTLVIDGRSHILSLTAQRLPEGFILLEMAPMDNQRRLSQE QLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRN LVDRLLGPQHPGMHVTESIHKVAERVVKLVSMELPDNVKLIRDYDPSLPELPHDPDQIEQ VLLNIVRNALQALGPEGGEIVLRTRTAFQLTLHGVRYRLAARIDVEDNGPGIPPHLQDTL FYPMVSGREGGTGLGLSIARSLIDQHSGKIEFTSWPGHTEFSVYLPIRK >gi|289774416|gb|GG745516.1| GENE 82 82839 - 84248 1201 469 aa, chain + ## HITS:1 COG:ZglnG KEGG:ns NR:ns ## COG: ZglnG COG2204 # Protein_GI_number: 15804453 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 EDL933 # 1 469 1 469 469 872 93.0 0 MQRGIAWIVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAIS HYQEQQQPRNAPISSPTADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA LHRHSPRSKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQADGGTLFLDE IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR LNVIRVHLPPLRERREDIPRLARHFLQIAARELGVEAKQLHPETETALTRLAWPGNVRQL ENTCRWLTVMAAGQEVLTQDLPSELFETTVPDSPTQMQPDSWATLLGQWADRALRSGHQN LLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|289774416|gb|GG745516.1| GENE 83 84509 - 85882 1372 457 aa, chain - ## HITS:1 COG:ECs4789 KEGG:ns NR:ns ## COG: ECs4789 COG0635 # Protein_GI_number: 15834043 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 457 3 459 459 825 87.0 0 MSEQIIDWDLALIQKYNYSGPRYTSYPTALEFSPQFGAAEFDAAVARYPQRPLSLYVHIP FCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPLFASRQVKQLHWGGGTPTYLNK AQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDHLRTEGFNRLSMGVQDFNKEVQR LVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQTPESFAFTLQKVAELNPDRLSVF NYAHLPTLFAAQRKIKDADLPSAEQKLEILQETIGSLTAAGYQFIGMDHFARPDDELAVA QRHGILHRNFQGYTTQGDTDLLGMGVSAISMIGDSYAQNQKELKLYYQQVAEQGDALWRG IALTRDDCLRRDVIKALICNFRLDIEAVEAQWDVDFQSYFAEDLKLLAPLAHDGLVAVDD KAIQVTAKGRLLIRNICMCFDAYLRQKARMQQFSRVI >gi|289774416|gb|GG745516.1| GENE 84 86071 - 86577 554 168 aa, chain - ## HITS:1 COG:STM4003 KEGG:ns NR:ns ## COG: STM4003 COG3078 # Protein_GI_number: 16767268 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 168 1 171 171 151 74.0 4e-37 MKKPTSATRGKSGRKSREELNQEARDRKRQKKHRGHAAGSRANGGDAASAGKKQSQTQDP RVGSKKPIPLGVSESSTPAPKQHKPKSEKPMLSPQAELELLENDERLDALLERLEEGGTL NAEEQSWVDAKLDRIDELMQQLGLSYDDEDEEEEERQEDMMRLLKGGN >gi|289774416|gb|GG745516.1| GENE 85 87162 - 87794 754 210 aa, chain + ## HITS:1 COG:STM4001 KEGG:ns NR:ns ## COG: STM4001 COG0218 # Protein_GI_number: 16767266 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Salmonella typhimurium LT2 # 1 210 1 210 210 363 87.0 1e-100 MTNWNYQLTHFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPG RTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRH PLKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAFNGDIQVEPFSS LKKSGVDKLRQKLDSWFNEIPPQEAVEDAE >gi|289774416|gb|GG745516.1| GENE 86 88142 - 90934 3109 930 aa, chain - ## HITS:1 COG:polA_2 KEGG:ns NR:ns ## COG: polA_2 COG0749 # Protein_GI_number: 16131704 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Escherichia coli K12 # 290 930 2 640 640 1108 89.0 0 MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAVV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAVPGVEADDVIGT LAREAERAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVSKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAALSFRGAKTMAAKLEQNK DVAYLSYQLATIKTDVELELTCEELEVQPPAADDLLALFRQYEFKRWTTDVEAGKWLQAK GGKPAAKPAEPAAAAQAEAEDEPASALSAEHYVTILDEATLVTWIDKLKQAPLFAFDTET DSLDNISANMVGLSFAVEPGVAAYVPVAHDYLDAPDQIPRERVLALLKPLLEDEKLLKVG QNLKYDRGILANYDIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEEIAG KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHEGPLNIFKHIEMPLVPVLS RVERNGVKIDPAVLHAHSQEIAQRLVELEQRAHEIAGEAFNLSSTKQLQTILFEKQGIKP LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS RDKGLLTAFSEGKDIHRATAAEVFGLPLDSVSSEQRRSAKAINFGLIYGMSAFGLARQLN IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAG AERAAINAPMQGTAADIIKRAMIAVDEWLRKEQPRVRMIMQVHDELVFEVHKDELDAVSK KIHELMENSTTLAVPLLVEVGSGENWDQAH >gi|289774416|gb|GG745516.1| GENE 87 91331 - 92230 699 299 aa, chain + ## HITS:1 COG:STM3998 KEGG:ns NR:ns ## COG: STM3998 COG0204 # Protein_GI_number: 16767263 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Salmonella typhimurium LT2 # 1 293 1 293 302 519 81.0 1e-147 MSRLLAAITLPLSIALTILVTIICSVPIIVAGLIKLLVPIPAVWRSISVFCNFMMYCWCE GLALLLHLNPWLKWDVEGLEGLNKKNWYLLISNHHSWADIVVLCVLFRKHIPMNKYFLKQ QLAWVPFIGLACWALDMPFMRRYSRSYLIRHPERRGKDVETTRRSCEKFRAHPTTIVNFV EGSRFTEAKKHETRSPYDNLLPPKAAGIAMALNVLGSQFDKLLNVTLCYPENNTKPFYDM LSGRLTRIVVRINLVPIGEELHGDYVNDKNFKRGFQRWLNGLWEEKDRQLTDIMRDKER >gi|289774416|gb|GG745516.1| GENE 88 92280 - 92903 910 207 aa, chain - ## HITS:1 COG:STM3997 KEGG:ns NR:ns ## COG: STM3997 COG0526 # Protein_GI_number: 16767262 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 372 91.0 1e-103 MKKVWLALAGMILAFSASAAQITDGKQYITLDKPIAGEPQVLEFFSFYCPHCYQFEEVLH VSDNVRQKLPEGTKMTKYHVEFLGPLGKDLTQAWAVAIALGVEDKITAPMFEAVQKTQTV QSVADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADLQLQGVPAMYVNGKYQLN PQGMDTSNMDVFVAQYADTVKQLVEKK >gi|289774416|gb|GG745516.1| GENE 89 92931 - 93917 720 328 aa, chain - ## HITS:1 COG:ECs4782 KEGG:ns NR:ns ## COG: ECs4782 COG2334 # Protein_GI_number: 15834036 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 546 81.0 1e-155 MHDKAFTFQTLRPDTIIDGLFDLGMRVDSGLTPLNSYENRVYQFQDEERHRYVVKFYRPE RWSAEQILEEHQFALQLVEDEVPVAAPLFFNDSTLHQHQGFYFAVFPSLGGRQFEADNLD QMEWVGRYLGRLHQTGRKQRFTARPEIGVQEYLLEPRQVFEQATLIPSGLKADFLKATDK LIAAVMEQWHGRGNTLRLHGDCHAGNILWRDGPLFVDLDDARTGPAIQDLWMLLNGDKAE QRMQLETIVEAYEEFSPFNSDEIALIEPLRAMRLVYYLAWLLRRWDDPAFPVNFPWLTGE DYWRGQTSTFLEQVKVLQEPPLQLTPMY >gi|289774416|gb|GG745516.1| GENE 90 93993 - 94262 489 89 aa, chain - ## HITS:1 COG:ECs4781 KEGG:ns NR:ns ## COG: ECs4781 COG3084 # Protein_GI_number: 15834035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 150 89.0 7e-37 MKCKRLNEVIELLQPAWQKEPELNLMQFLQKLAKEAGYEGELSDLSDDILIYHLKMRDSS KDAVIPGIQKDYEEDFKTALLRARGVIKE >gi|289774416|gb|GG745516.1| GENE 91 94334 - 94915 213 193 aa, chain + ## HITS:1 COG:STM3994 KEGG:ns NR:ns ## COG: STM3994 COG0746 # Protein_GI_number: 16767259 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Salmonella typhimurium LT2 # 4 191 5 192 194 250 64.0 1e-66 MQSEAITGVVLAGGKATRMGGIDKGLQALNGRPLWRHVAETLAPQVDELVISANRHLEQW RASGYPVFRDIQEGYQGPLAGMLAVMQQVASPWFVFCPCDTPFIPSFLVERFIQQRGAAP VVWAHDGERDHPAVALVHRQIIPELEAYLAHGERRVMVFMRQVGGRPVNFSDVKSAFINV NTLEDLQQMQEPS >gi|289774416|gb|GG745516.1| GENE 92 94912 - 95418 311 168 aa, chain + ## HITS:1 COG:STM3993 KEGG:ns NR:ns ## COG: STM3993 COG1763 # Protein_GI_number: 16767258 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Salmonella typhimurium LT2 # 1 167 1 167 171 267 79.0 5e-72 MTPLLAIAAWSGTGKTTLLKRLIPELCVRGLRPGLIKHTHHDMDVDKPGKDSYELRKAGA AQTIVASEQRWALMTETPETPELDLTWLVSRMDASKLDLVLVEGFKHEPVPKILLFRQNS GHRVEELIIDEHTIAVASDMPIATSLPQLDLNDIQQIATFIANWLERH >gi|289774416|gb|GG745516.1| GENE 93 95461 - 96001 -271 180 aa, chain + ## HITS:1 COG:no KEGG:SPAB_04232 NR:ns ## KEGG: SPAB_04232 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 60 104 19 63 68 75 84.0 1e-12 MASADRGLPEGGAAHLVRATGRAGRVRIRSPGKHSATGETCRHAARSTETQKAHPAGWAF YLFDAWQFMAGVLPATLRAVAAQRSNPLPADLSSSGERSPTDNRQNKKLSLSTELSALFD AWQFPTLTWGDPTLPSALRRFTSEFGMGSGGTTALSPPGKFCFQYVLRTHRLICITLKIF Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:15:36 2011 Seq name: gi|289774337|gb|GG745517.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.10, whole genome shotgun sequence Length of sequence - 86296 bp Number of predicted genes - 78, with homology - 78 Number of transcription units - 38, operones - 18 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.120 - CDS 39 - 572 675 ## COG4635 Flavodoxin 2 1 Op 2 4/0.520 - CDS 584 - 2035 1496 ## COG0168 Trk-type K+ transport systems, membrane components 3 1 Op 3 2/0.800 - CDS 2075 - 2689 363 ## COG1739 Uncharacterized conserved protein 4 1 Op 4 . - CDS 2689 - 4020 1721 ## COG0006 Xaa-Pro aminopeptidase - Prom 4109 - 4168 2.9 + Prom 4097 - 4156 3.7 5 2 Op 1 20/0.000 + CDS 4212 - 6401 2720 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 6 2 Op 2 . + CDS 6411 - 7574 1411 ## COG0183 Acetyl-CoA acetyltransferase + Term 7652 - 7684 2.1 - Term 7608 - 7657 -0.3 7 3 Op 1 6/0.120 - CDS 7682 - 8383 1072 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 8 3 Op 2 . - CDS 8439 - 9908 1630 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 9934 - 9993 4.6 + Prom 9932 - 9991 6.0 9 4 Tu 1 . + CDS 10087 - 10575 626 ## COG0250 Transcription antiterminator + Term 10590 - 10633 -0.9 10 5 Op 1 2/0.800 - CDS 10572 - 11363 733 ## COG0084 Mg-dependent DNase - Term 11368 - 11401 6.1 11 5 Op 2 28/0.000 - CDS 11408 - 12187 902 ## COG0805 Sec-independent protein secretion pathway component TatC 12 5 Op 3 16/0.000 - CDS 12190 - 12726 498 ## COG1826 Sec-independent protein secretion pathway components 13 5 Op 4 6/0.120 - CDS 12730 - 12981 211 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Prom 13014 - 13073 5.0 14 6 Op 1 10/0.040 - CDS 13111 - 14703 1628 ## COG0661 Predicted unusual protein kinase 15 6 Op 2 7/0.120 - CDS 14748 - 15353 605 ## COG3165 Uncharacterized protein conserved in bacteria 16 6 Op 3 5/0.400 - CDS 15367 - 16122 379 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 17 6 Op 4 4/0.520 - CDS 16193 - 17671 1693 ## COG1322 Uncharacterized protein conserved in bacteria - Prom 17691 - 17750 6.5 - Term 17729 - 17757 2.1 18 7 Tu 1 . - CDS 17777 - 18538 1052 ## COG2820 Uridine phosphorylase - Prom 18566 - 18625 4.6 + Prom 18721 - 18780 5.0 19 8 Tu 1 . + CDS 18811 - 19623 984 ## COG0412 Dienelactone hydrolase and related enzymes + Term 19636 - 19680 7.2 - Term 19631 - 19659 1.0 20 9 Tu 1 . - CDS 19683 - 21947 2824 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 22096 - 22155 3.4 + Prom 22102 - 22161 4.4 21 10 Tu 1 . + CDS 22195 - 23148 760 ## COG0583 Transcriptional regulator 22 11 Op 1 3/0.640 - CDS 23036 - 23935 1286 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 23959 - 24018 3.3 - Term 23967 - 24019 -0.7 23 11 Op 2 5/0.400 - CDS 24024 - 24824 1142 ## COG0561 Predicted hydrolases of the HAD superfamily 24 11 Op 3 . - CDS 24869 - 25861 978 ## COG2267 Lysophospholipase + Prom 25877 - 25936 4.5 25 12 Tu 1 . + CDS 25971 - 26591 907 ## COG1280 Putative threonine efflux protein + Prom 26668 - 26727 3.4 26 13 Op 1 1/0.920 + CDS 26754 - 27116 274 ## COG5464 Uncharacterized conserved protein 27 13 Op 2 . + CDS 27147 - 27662 364 ## COG5464 Uncharacterized conserved protein 28 14 Op 1 4/0.520 - CDS 27707 - 28327 931 ## COG1280 Putative threonine efflux protein 29 14 Op 2 5/0.400 - CDS 28389 - 30215 2142 ## COG0514 Superfamily II DNA helicase - Term 30231 - 30264 4.5 30 14 Op 3 . - CDS 30283 - 31143 1239 ## COG2829 Outer membrane phospholipase A - Prom 31240 - 31299 4.0 + Prom 31142 - 31201 6.8 31 15 Op 1 1/0.920 + CDS 31296 - 31760 607 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 32 15 Op 2 . + CDS 31809 - 32702 1260 ## COG2962 Predicted permeases + Term 32725 - 32753 1.0 - Term 32712 - 32740 1.0 33 16 Tu 1 . - CDS 32746 - 33696 1443 ## COG0598 Mg2+ and Co2+ transporters - Prom 33929 - 33988 3.0 34 17 Tu 1 5/0.400 - CDS 34052 - 36214 2939 ## COG0210 Superfamily I DNA and RNA helicases - Term 36222 - 36250 2.3 35 18 Op 1 8/0.080 - CDS 36278 - 36994 683 ## COG1011 Predicted hydrolase (HAD superfamily) 36 18 Op 2 10/0.040 - CDS 36994 - 37896 1022 ## COG4973 Site-specific recombinase XerC 37 18 Op 3 4/0.520 - CDS 37893 - 38600 714 ## COG3159 Uncharacterized protein conserved in bacteria 38 18 Op 4 1/0.920 - CDS 38597 - 39421 950 ## COG0253 Diaminopimelate epimerase 39 18 Op 5 . - CDS 39457 - 39660 207 ## COG5567 Predicted small periplasmic lipoprotein - Prom 39781 - 39840 3.0 + Prom 39648 - 39707 3.1 40 19 Tu 1 . + CDS 39799 - 40119 598 ## COG1965 Protein implicated in iron transport, frataxin homolog - Term 40205 - 40245 2.0 41 20 Tu 1 . - CDS 40253 - 42805 3482 ## COG3072 Adenylate cyclase - Prom 42934 - 42993 5.0 + Prom 42965 - 43024 2.5 42 21 Op 1 23/0.000 + CDS 43163 - 44104 912 ## COG0181 Porphobilinogen deaminase 43 21 Op 2 10/0.040 + CDS 44101 - 44841 533 ## COG1587 Uroporphyrinogen-III synthase 44 21 Op 3 11/0.040 + CDS 44863 - 46044 1259 ## COG2959 Uncharacterized enzyme of heme biosynthesis 45 21 Op 4 . + CDS 46048 - 47244 1597 ## COG3071 Uncharacterized enzyme of heme biosynthesis - TRNA 47706 - 47782 92.7 # Pro TGG 0 0 - TRNA 47825 - 47911 66.6 # Leu CAG 0 0 - TRNA 47935 - 48010 84.9 # His GTG 0 0 - TRNA 48066 - 48142 91.0 # Arg CCG 0 0 - Term 48011 - 48065 -0.3 46 22 Tu 1 . - CDS 48245 - 49630 1914 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 49742 - 49801 4.8 47 23 Op 1 . - CDS 49836 - 50576 759 ## COG1922 Teichoic acid biosynthesis proteins 48 23 Op 2 . - CDS 50588 - 51934 1913 ## Kvar_4934 WzyE family protein 49 23 Op 3 . - CDS 51931 - 53007 1322 ## Kvar_4935 4-alpha-L-fucosyltransferase 50 23 Op 4 6/0.120 - CDS 53004 - 54254 1567 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 51 23 Op 5 4/0.520 - CDS 54256 - 55386 1473 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 52 23 Op 6 4/0.520 - CDS 55391 - 56065 744 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 53 23 Op 7 16/0.000 - CDS 56043 - 56924 1013 ## COG1209 dTDP-glucose pyrophosphorylase 54 23 Op 8 4/0.520 - CDS 56943 - 58010 1349 ## COG1088 dTDP-D-glucose 4,6-dehydratase 55 23 Op 9 10/0.040 - CDS 58007 - 59269 1519 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 56 23 Op 10 4/0.520 - CDS 59266 - 60351 1106 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 57 24 Op 1 5/0.400 - CDS 60453 - 61469 757 ## COG3765 Chain length determinant protein 58 24 Op 2 3/0.640 - CDS 61513 - 62517 972 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Prom 62707 - 62766 4.4 - Term 62806 - 62838 5.0 59 25 Tu 1 . - CDS 62857 - 64116 1643 ## COG1158 Transcription termination factor 60 26 Tu 1 . - CDS 64449 - 64778 514 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 65031 - 65090 2.6 61 27 Tu 1 . + CDS 65120 - 66385 1429 ## COG0513 Superfamily II DNA and RNA helicases 62 28 Op 1 . + CDS 66504 - 68012 1727 ## COG0248 Exopolyphosphatase 63 28 Op 2 . + CDS 68032 - 68958 510 ## COG0583 Transcriptional regulator + Prom 68993 - 69052 3.5 64 29 Op 1 . + CDS 69089 - 70087 1247 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold + Term 70106 - 70137 4.1 65 29 Op 2 . + CDS 70150 - 70872 947 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 71115 - 71151 -0.9 66 30 Tu 1 . - CDS 70878 - 72899 2702 ## COG0210 Superfamily I DNA and RNA helicases - Prom 72926 - 72985 2.2 + Prom 72926 - 72985 2.6 67 31 Op 1 3/0.640 + CDS 73012 - 73293 279 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 68 31 Op 2 . + CDS 73345 - 73626 340 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 73634 - 73667 4.5 - Term 73683 - 73719 -0.8 69 32 Tu 1 . - CDS 73829 - 75304 2168 ## COG0059 Ketol-acid reductoisomerase - Prom 75377 - 75436 7.5 + Prom 75375 - 75434 5.8 70 33 Tu 1 . + CDS 75459 - 76349 918 ## COG0583 Transcriptional regulator + Term 76374 - 76420 2.6 - Term 76281 - 76311 1.0 71 34 Op 1 8/0.080 - CDS 76346 - 77890 1757 ## COG1171 Threonine dehydratase 72 34 Op 2 5/0.400 - CDS 77893 - 79743 2205 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Term 79763 - 79796 3.7 73 35 Op 1 5/0.400 - CDS 79804 - 80733 1181 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 74 35 Op 2 7/0.120 - CDS 80753 - 81010 230 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 75 35 Op 3 . - CDS 81007 - 82653 1588 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 82686 - 82745 3.7 + Prom 82962 - 83021 9.2 76 36 Tu 1 . + CDS 83247 - 84767 561 ## COG0606 Predicted ATPase with chaperone activity - Term 84747 - 84783 1.6 77 37 Tu 1 . - CDS 84792 - 85130 442 ## COG3085 Uncharacterized protein conserved in bacteria - Prom 85167 - 85226 4.1 78 38 Tu 1 . + CDS 85219 - 86070 655 ## COG0583 Transcriptional regulator + Term 86145 - 86176 2.7 - TRNA 86172 - 86247 87.1 # Trp CCA 0 0 Predicted protein(s) >gi|289774337|gb|GG745517.1| GENE 1 39 - 572 675 177 aa, chain - ## HITS:1 COG:ECs4778 KEGG:ns NR:ns ## COG: ECs4778 COG4635 # Protein_GI_number: 15834032 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Escherichia coli O157:H7 # 1 177 1 177 181 277 75.0 6e-75 MKTLILFSTRDGQTREIASFLASELKELGIDADTLNLNRTDVVEWHHYDRVVIGASIRYG HFHPAVDRFVKKHLASLQALPGAFFSVNLVARKPEKRTPQTNSYTRKFLLNSPWQPQSCA VFAGALRYPRYSWYDRFMIRLIMKMTGGETDTRKEVVYTDWQQVSRFAREIAQMARK >gi|289774337|gb|GG745517.1| GENE 2 584 - 2035 1496 483 aa, chain - ## HITS:1 COG:STM3986 KEGG:ns NR:ns ## COG: STM3986 COG0168 # Protein_GI_number: 16767256 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Salmonella typhimurium LT2 # 1 483 1 483 483 826 96.0 0 MHFRAITRIVGLLVILFSGTMIVPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKQ KGELKSREGFLIVVLFWTVLGSVGALPFIFAEQPNLTVTDAFFESFSGLTTTGATTLVGL DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE TAKTLWLIYVLLTIACALALWFAGMPAFDAIGHSFATIAIGGFSTHDASVGYFNSPMINS IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQLTLVIICTLVLWLHNVYGS VLTTLNQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIISMLAIIATGV DDFSAFASVVATLNNLGPGLGVVADNFATMNPVAKWILIANMLFGRLEVFTLLVLFTPTF WRE >gi|289774337|gb|GG745517.1| GENE 3 2075 - 2689 363 204 aa, chain - ## HITS:1 COG:STM3985 KEGG:ns NR:ns ## COG: STM3985 COG1739 # Protein_GI_number: 16767255 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 204 1 204 204 346 89.0 1e-95 MESWLIPAAPVTVVEEIKKSRFITLLAHTDGVAAAKAFVESVRADHPDARHHCVAWVAGP PDDSQQLGFSDDGEPAGTAGKPMLAQLMGCGVGEITAVVVRYYGGILLGTGGLVKAYGGG VHQALAQLTTQRKTPLTAYTLQCEYGQLAGIEALLAQFSGKVVESEYLASVRLRVALPRA EVAAFSAKLADFSRGSLQLLKIDE >gi|289774337|gb|GG745517.1| GENE 4 2689 - 4020 1721 443 aa, chain - ## HITS:1 COG:STM3984 KEGG:ns NR:ns ## COG: STM3984 COG0006 # Protein_GI_number: 16767254 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 443 1 443 443 867 91.0 0 MESLSALYKNHIVTLQERTRDVLARFQMDALLIHSGELVNVFLDDHPYPFKVNPQFKAWV PVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTAFWTEEVDVIALPKADGIGSQLP AARGNIGYIGPVPERALGLGIAADKINPKGVIDYLHYYRAYKTDYELACMREAQKSAVNG HRAAYEAFQSGMSEFDINQAYLTATGHRDTDVPYSNIVALNEHASVLHYTKLDHRAPAEM RSFLLDAGAEYNGYAADLTRTWAAHGDNDFAHLIKDVNDEQLALISTMKAGTSYIDYHIQ FHQRIAKLLRKHQLVTNMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDAGTHL AAPSKYPYLRCTRIIEPRMVLTIEPGIYFIESLLAPWREGPFSKHFNWQKIDAMKPFGGI RIEDNVVVHENSIENMTRDLKLA >gi|289774337|gb|GG745517.1| GENE 5 4212 - 6401 2720 729 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 307 729 1 423 423 797 93.0 0 MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQNDLKGLLLRSE KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALK IGLVDGVVAAEKLRDGALAILRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV AQTAGKHYPAPITAVKTIEAAARLGREEALVLENKSFVPLAHTNEARALVGIFLNDQYVK AKAKKLTKDVETPKHAAVLGAGIMGGGIAYQSAWKGVPVVMKDISDKSLTLGMTEAAKLL NKQLERGKIDGLKLAGVISTIQPTLEYSGFDRVDVVVEAVVENPKVKKAVLAETEAKVRP DTVLASNTSTIPISELASVLQRPENFCGMHFFNPVHRMPLVEVIRGEKTSDKTIAKVVAW ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKP KKEEDAAVDSLLADVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY GLGFPPFHGGAFRWLDTIGSAKYLDMAQQYQHLGPLYEVPAGLRDKARHNEAYYPQVEPA RPVGALKTA >gi|289774337|gb|GG745517.1| GENE 6 6411 - 7574 1411 387 aa, chain + ## HITS:1 COG:STM3982 KEGG:ns NR:ns ## COG: STM3982 COG0183 # Protein_GI_number: 16767252 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 387 1 387 387 714 95.0 0 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLSRNPSLEASAIDDIYWGCVQQ TLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARMIMTGDASVCLIGGVEH MGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARLHGISREMQDQFAARSHARAWAAT QSGAFKAEIIPTGGHDADGVLKSFNYDEVIRPETTVEALAALRPAFDPVTGTVTAGTSSA LSDGAAAMLLMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSTS DIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINQM ERKDAQFGLATMCIGLGQGIATVFERI >gi|289774337|gb|GG745517.1| GENE 7 7682 - 8383 1072 233 aa, chain - ## HITS:1 COG:STM3979 KEGG:ns NR:ns ## COG: STM3979 COG0543 # Protein_GI_number: 16767249 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 233 1 233 233 434 91.0 1e-122 MTTLSCKVTSVEAITDTVYRVRLVPEAAFSFRAGQYLMVVMDERDKRPFSMASTPSEHEF IELHIGASELNLYAMAVMDRILKEREIEVDIPHGEAWLRDDEDRPLILIAGGTGFSYVRS ILLTALARNPDRDIAIYWGGREAKHLYDLAELEALSIKHPNLRIEPVVEQPEEGWRGRSG TVLTAVLQDYGTLAEHDIYIAGRFEMAKIARDLFCNERGAREDRLFGDAFAFI >gi|289774337|gb|GG745517.1| GENE 8 8439 - 9908 1630 489 aa, chain - ## HITS:1 COG:ECs4771 KEGG:ns NR:ns ## COG: ECs4771 COG0043 # Protein_GI_number: 15834025 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 488 4 491 497 996 96.0 0 MKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVL CNLFGTPRRVALGMGQEDVSSLREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTK RLRGAPCQQKIIQGDDVDLNKIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYRQQL IGKNKLIMRWLSHRGGALDFQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLSEYA FAGLLRGTKTEVVKCVSNDLEVPASAEIVLEGYIEAGEMAPEGPYGDHTGYYNEVDSFPV FTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSY RLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDP ARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPQVTARIDA IWDELAIFK >gi|289774337|gb|GG745517.1| GENE 9 10087 - 10575 626 162 aa, chain + ## HITS:1 COG:STM3977 KEGG:ns NR:ns ## COG: STM3977 COG0250 # Protein_GI_number: 16767247 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Salmonella typhimurium LT2 # 1 162 1 162 162 285 82.0 3e-77 MQAWYLLYCKRGQLQRAQEHLERQSVNCLMPTIALEKIIRGKRTMVSEPLFPNYLFIEFD PEVIHTTTISATRGVNNFVRFGALPAVVPSAVIHQLSIYKPEGITDPETPHEGDSVLITD GAFEGLQAIFTEPDGEARSMLLLNLLNKQVLQSVKNTDFQKI >gi|289774337|gb|GG745517.1| GENE 10 10572 - 11363 733 263 aa, chain - ## HITS:1 COG:STM3976 KEGG:ns NR:ns ## COG: STM3976 COG0084 # Protein_GI_number: 16767246 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Salmonella typhimurium LT2 # 1 258 1 258 260 421 75.0 1e-117 MFDIGVNLTSSQFSRDHDEVVARARAAGVHGMLLTGTNLPESQQAQRMASRYSGCWSTAG VHPHDGSSWTPAVAEAIYTLAREPQVVAIGECGLDFNRNFSTPQEQEAAFSAQLALAAEL SVPVFLHCRDAHDRFLALLKPWLEKIPGAVLHCFTGSRSEVQECLDLGLFIGITGWVCDE RRGLELRELLPAIPAERLLLETDAPYLLPRDLKPKPASRRNEPAYLPHILASVASWRGEE TQWLEAQTDANVRTLFGIDVNGV >gi|289774337|gb|GG745517.1| GENE 11 11408 - 12187 902 259 aa, chain - ## HITS:1 COG:STM3975 KEGG:ns NR:ns ## COG: STM3975 COG0805 # Protein_GI_number: 16767245 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Salmonella typhimurium LT2 # 1 259 1 259 259 405 84.0 1e-113 MGVDDTQPLISHLIELRKRLLNSIIAILVIFLALVYFANDIYQLVSAPLISKMPVGATMI ATDVASPFFTPIKLTFMVSVILSVPIILYQVWAFVAPALYKHERRLVVPLLVSSTLLFYI GMAFAYFVVFPLAFGFLTHAAPEGVLVSTDIRSYLDFVMALFMAFGVSFEVPVAIVLLCW MGVTTPEELRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEVGVFFARFYTGKR LTRDDDAAAEAEAAEHREE >gi|289774337|gb|GG745517.1| GENE 12 12190 - 12726 498 178 aa, chain - ## HITS:1 COG:STM3974 KEGG:ns NR:ns ## COG: STM3974 COG1826 # Protein_GI_number: 16767244 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Salmonella typhimurium LT2 # 1 178 1 182 182 199 77.0 2e-51 MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVVGWIRTLRSLATTVQNELAQELKLQEFQ ESLKKVEKASLNNLTPELKASMDELREAAESMKRSYSAHDPEKASDEANTILNPVVKGSE AQRQDVTPATAEHQASAPAHAPDPVADEQPASPAELPAEKTSATAAAPHSSPASSDKP >gi|289774337|gb|GG745517.1| GENE 13 12730 - 12981 211 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 76 3 77 83 85 59 6e-16 MGGISIWQLLIVVVIVVLLFGTKKLSSLGSDLGASIKGFKKAMSDDDKPEKSAPDADFTA KTIADKQDDAKKDETKRHDKEQV >gi|289774337|gb|GG745517.1| GENE 14 13111 - 14703 1628 530 aa, chain - ## HITS:1 COG:ECs4765 KEGG:ns NR:ns ## COG: ECs4765 COG0661 # Protein_GI_number: 15834019 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Escherichia coli O157:H7 # 1 529 17 545 546 978 88.0 0 MSYGLDELIPKIRLTLPLRIWRRMLFWMPNRHQDQPLGTRLRLALQELGPVWIKFGQMLS TRRDLFPPHIADQLALLQDRVAPFEGKLAQQQIEKAMGGLPVEAWFDDFSVEPLASASIA QVHTARLKENGKEVVIKVIRPDILPIIKADMKLIYRLARWVPRLLPDGRRLRPQEVVREY EKTLLDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEA LEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGS LNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLA EISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESW IKDQVGIPALVRAFKDKAPFWIERMPEIPELVYQSLQQSKQLQTSVDTIVRDMHVRHVRQ GQSRYLFGIGAVLLLSGTLLFIHRPEWGMMPGWLMAGGVVTWLIGWRKTH >gi|289774337|gb|GG745517.1| GENE 15 14748 - 15353 605 201 aa, chain - ## HITS:1 COG:yigP KEGG:ns NR:ns ## COG: yigP COG3165 # Protein_GI_number: 16131683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 201 1 201 201 291 75.0 4e-79 MPFTPLVTASIETALNTFLWRDKALKPARQRLLGKVLRVQLQDFSTPIVLAFSERQVDVL SAWEGEADCTVITRLSVLPKLRNRQQLTALIRSGDLEVQGDLQVVQNMVSLCDLAEFDPA ELLAPYTGDIVAEGVGKVLRGGAQFLLKGAQRQQRYVAEAITEEWRLAPGPLELAWFAEE TTAIERALAALEKRLETLEGK >gi|289774337|gb|GG745517.1| GENE 16 15367 - 16122 379 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 150 35 2e-35 MVEDSQETTHFGFQTVAKEQKQDMVAHVFHSVAAKYDVMNDLMSFGIHRLWKRFTIDCSG VRRGQTVLDLAGGTGDLTAKFSRLVGETGRVMLADINDSMLKMGREKLRNIGIVGNVEYV QANAEALPFADNTFDCITISFGLRNVTDKEKALRSMYRVLKPGGRLLVLEFSKPIIEPLS KAYDAYSFHILPKVGELVAKDGDSYRYLAESIRMHPDQETLKGMMQDAGFESVDYHNLTA GIVALHRGYKF >gi|289774337|gb|GG745517.1| GENE 17 16193 - 17671 1693 492 aa, chain - ## HITS:1 COG:STM3969 KEGG:ns NR:ns ## COG: STM3969 COG1322 # Protein_GI_number: 16767239 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 11 463 1 453 476 707 89.0 0 MCHQVIAGGVVDLSIIISAVIALAAGLMVGWLATKARADQIRADLIEERRELDIELSAAR QQLVQEAHWREECELLNNELRSLRDINTSLEADLREVTTRLESTQLHAEDKIRQMVNSEQ RLSEQFENLANRIFEHSNRRVDEQNRLSLHGLLTPLREQLDGFRRQVQESFGQEARERHT LAHEIRNLQQLNAQMAQEALNLTKALKGDNKTQGNWGEVVLTRVLEASGLREGYEYQTQV SIETDNRSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTREVALQEHLASVRN HIRLLGRKDYQQLPGLRSLDYVLMFIPVEPAFLVAIDRQPELISEALQNNIMLVSPTTLL VALRTIANLWRYEHQSRNAQKIAERAGRLYDKMRLFVDDMSAIGQSLDKAQENYRQAMKK LASGRGNLLAQAEAFRGLGVEVKRGINPDLVEQATAQDDEYRLEDEDNLPENDAFSADSA EALHNREAAPPR >gi|289774337|gb|GG745517.1| GENE 18 17777 - 18538 1052 253 aa, chain - ## HITS:1 COG:STM3968 KEGG:ns NR:ns ## COG: STM3968 COG2820 # Protein_GI_number: 16767238 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Salmonella typhimurium LT2 # 1 253 1 253 253 473 97.0 1e-133 MSKSDVFHLGLTKNDLQGATLAIVPGDPERVEKIAALMDKPVKLASHREFTSWRAELDGK PVIVCSTGIGGPSTSIAVEELAQLGVRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGAS LHFAPMEFPAVADFACTTALVEAAKSIGATTHIGVTASSDTFYPGQERYDTFSGRVVSRF KGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESH AVKIVVEAARRLL >gi|289774337|gb|GG745517.1| GENE 19 18811 - 19623 984 270 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 270 23 292 293 457 80.0 1e-129 MTTTKQPGFAPAASPHAATAVHTPEEHIIAGETSIPSQGENMPAYHARPKNADGPLPIVI VVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVTKVPDAQV LADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAGVAWYGKLVGEKSLN SPKHPVDIAVDLNAPVLGLYGAKDASIPQDTIETMRQALRAANATAEIVVYPEADHAFNA DYRASYHEESAKDGWQRMLAWFAQYGGKKA >gi|289774337|gb|GG745517.1| GENE 20 19683 - 21947 2824 754 aa, chain - ## HITS:1 COG:metE KEGG:ns NR:ns ## COG: metE COG0620 # Protein_GI_number: 16131678 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Escherichia coli K12 # 1 752 1 752 753 1443 93.0 0 MTIINHTLGFPRVGLRRELKKAQESYWAGNATREELLTVGRELRARHWEQQKQAGVDLLP VGDFAWYDHVLTTSLLLGNVPARHQNKDGSIDIDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKIKPVLLGPVTYLWLGKVKAEPFDR LSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPPAWLEAFKPAYDALQGQVKLLL TTYFEGISDNLATIAALPVQGLHVDLVHGKDDVAELHNRLPADWLLSAGLINGRNVWRAD LTEKYAQIKDLVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCGELALLR DALNSGDTAAITEWSATIQARRHSTRVHNAEVEKRLAAITAQDSQRASPYEVRAQAQRQR FNLPKWPTTTIGSFPQTTEIRGLRLDFKKGNLDASHYRTGIAEHIKQAIVEQERLGLDVL VHGEAERNDMVEYFGEHLDGFIFTQNGWVQSYGSRCVKPPVVIGDVSRPQAITVDWAKYA QSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDE PALREGLPLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDAD VITIETSRSDMELLESFEAFEYPNEIGPGVYDIHSPNVPSVEWIEALLAKAAQRIPAERL WVNPDCGLKTRGWPETRAALANMVQAAQNLRQSA >gi|289774337|gb|GG745517.1| GENE 21 22195 - 23148 760 317 aa, chain + ## HITS:1 COG:ECs4758 KEGG:ns NR:ns ## COG: ECs4758 COG0583 # Protein_GI_number: 15834012 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 314 1 314 317 566 91.0 1e-161 MIEIKHLKTLQALRNSGSLAGAAAALHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP QGEILLQLANQVLPQIARALQDCNEPQQTRLRLAIECHSCIQWLTPALENFRARWPHVEV DFHSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPEHPLAMKTLIT PEDLASETLLIYPVQRGRLDIWRHFLQPAGISPQLKSVDNTLLLIQMVAARMGIAALPHW VVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARNHACDHLPFVRSAE RPSGDGPTARPGSPTLR >gi|289774337|gb|GG745517.1| GENE 22 23036 - 23935 1286 299 aa, chain - ## HITS:1 COG:ECs4757 KEGG:ns NR:ns ## COG: ECs4757 COG0697 # Protein_GI_number: 15834011 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 457 82.0 1e-128 MALLIITTILWAFSFSLIGEYLAGSVDSYFSVLMRVGLAALVFLPFLRTRGQSPRTIVLY MLVGAMQLGIMYLLAFRAYLYLTVSEFLLFTVFTPLYITLIYDLLSGRKLRWGYLLSAAL AVLGAAIIRYDKVSDHFWTGLLLVQLSNLCFAIGMVGYKRLMEVRPMPQHNAFAWFYVGA FIVAVAAWFMLGNPQKLPTTTLQWSVLVWLGVVASGLGYFMWNYGATQVDAGTLGIMNNV HVPAGLLVNLAIWQEQPHWPSFISGALVILASLWVHRRWVAPHSGQTAGDRRRGSAQSE >gi|289774337|gb|GG745517.1| GENE 23 24024 - 24824 1142 266 aa, chain - ## HITS:1 COG:Z5347 KEGG:ns NR:ns ## COG: Z5347 COG0561 # Protein_GI_number: 15804418 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 265 40 304 305 494 86.0 1e-140 MYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRS YMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEE MRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLT CLEVMAGGVSKGHALEAVAKMLGYTLADCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKD LHPELEVIGSNADDAVPHYLRKLYLD >gi|289774337|gb|GG745517.1| GENE 24 24869 - 25861 978 330 aa, chain - ## HITS:1 COG:STM3961 KEGG:ns NR:ns ## COG: STM3961 COG2267 # Protein_GI_number: 16767231 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Salmonella typhimurium LT2 # 1 328 1 328 338 572 80.0 1e-163 MFGQKKDWETRENAFAAFSMGPLTDFWRQREEAEFKGVDDVPVRFVRFCAQNNDRLVLIC PGRIESYVKYAEVAYDLFHSGFDVMIIDHRGQGRSGRLLSDTHRGHVVNFSDYVDDLAAL WQQQVVPGHWRKRFILAHSMGGAIATLFLQRYQAHCDAIALCAPMFGIIIRLPDWMVRHI LDWAEGHQRIREEYAIGTGRWRALPFAVNVLTHSRQRYRRNLRFYADEPRLQVGGPTWHW VREGMLAGDEVLANVEKDTAPTLLLQAEEERVVDNLMHDRYCELRAAAGHPCEGGKPLVI EGAYHEILFEKDAMRSVALNAIVEFFNRHT >gi|289774337|gb|GG745517.1| GENE 25 25971 - 26591 907 206 aa, chain + ## HITS:1 COG:ECs4754 KEGG:ns NR:ns ## COG: ECs4754 COG1280 # Protein_GI_number: 15834008 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 328 90.0 5e-90 MTIEWWFAYLLTSIILSLSPGSGAINTMTTSINHGYRGAAASIAGLQTGLVIHIVLVGVG LGTLFSRSVLAFEVLKWAGAAYLIWLGIQQWRAAGAIDLNTLAKAQTRGKLFQRAVFVNL TNPKSIVFLAALFPQFILPHQPQVMQYLVLGVTTIVVDIIVMIGYATLAQRISAWIKGPK QMKALNKVFGSLFMLVGALLASARHA >gi|289774337|gb|GG745517.1| GENE 26 26754 - 27116 274 120 aa, chain + ## HITS:1 COG:STM3508 KEGG:ns NR:ns ## COG: STM3508 COG5464 # Protein_GI_number: 16766796 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 2 120 4 122 304 186 73.0 9e-48 MAETATPHDAVFKTFLSRVETARDFIELHLPSSLTQICKLDTLRLESGSFLEDDLRPYYS DILYSLETTRGAGYVHVLIEHQSAPDKLMAFRLMRYAVAAMQRHLESGHKTLPLVIPILF >gi|289774337|gb|GG745517.1| GENE 27 27147 - 27662 364 171 aa, chain + ## HITS:1 COG:YPMT1.71 KEGG:ns NR:ns ## COG: YPMT1.71 COG5464 # Protein_GI_number: 16082863 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 2 171 151 328 328 174 51.0 6e-44 MRWLDNFADPETARQLYSGAFPLVDITVIPDDDIMQHRSMAALTLVQKHIRQRDMAQLLD KLTHLLLLEQMSGQQITVLVNYMAQAGDAEDTRTLLYGLAQRVPQHGGLLMTLAETWLAE GMEKGVQQGIKEGKHQALLQVAEAMRKRGIDDAAIMEMTGLAEDELQRLRH >gi|289774337|gb|GG745517.1| GENE 28 27707 - 28327 931 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 323 86.0 9e-89 MLMLFLTVALVHIIALMSPGPDFFFVSQTAISRSRREAMMGVLGITCGVMIWAGVALLGL NLILAQMAWLHNIIMVGGGLYLCWMGYQMLRGALKKEAVASAEPQVELARSGRSFVKGLL TNLANPKAIIYFGSVFSLFVGDSVGAGARWGIFLLIIVETLAWFMVVASLFALPGMRRGY QRMAKWIDGIAGTLFAGFGIHLIISR >gi|289774337|gb|GG745517.1| GENE 29 28389 - 30215 2142 608 aa, chain - ## HITS:1 COG:STM3958 KEGG:ns NR:ns ## COG: STM3958 COG0514 # Protein_GI_number: 16767228 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Salmonella typhimurium LT2 # 1 608 7 614 615 1152 91.0 0 MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP ALVMGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQVRLLY IAPERLMLDNFLEHLANWNLAMLAVDEAHCISQWGHDFRPEYAALGQLRQRLPQIPFMAL TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI IYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGI NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG LVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR KLRKAIADEENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIR AHVDGDDE >gi|289774337|gb|GG745517.1| GENE 30 30283 - 31143 1239 286 aa, chain - ## HITS:1 COG:ECs4751 KEGG:ns NR:ns ## COG: ECs4751 COG2829 # Protein_GI_number: 15834005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Escherichia coli O157:H7 # 1 286 1 289 289 494 84.0 1e-140 MRISLACLVALCALPAGVMAQDASVHDKPAVRGSIIANLLQDHDNPFLLYPYESNYLLYT WTSDLNKEAIRSYDWAENARKDEVKFQLSLAFPLWRGILGDNSLLGASYTQKSWWQLSNS KESAPFRETNYEPQLFLGFATDYQFAGWTLRDIEMGYNHDSNGRSDPTSRSWNRLYARLM AQNGNWLVEVKPWYVVGNTDDNPDITKYMGYYRLKVGYQLGEAILSAQGQYNWNTGYGGA ELGVSYPITKHVRAYTQIYSGYGESLIDYNFNQTRVGVGLMLNDLF >gi|289774337|gb|GG745517.1| GENE 31 31296 - 31760 607 154 aa, chain + ## HITS:1 COG:STM3956 KEGG:ns NR:ns ## COG: STM3956 COG2050 # Protein_GI_number: 16767226 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Salmonella typhimurium LT2 # 4 154 11 161 161 274 94.0 5e-74 MSELTAEAALKLVGEIFVYHMPFNRALGLELERYEKAFAQLSFNNQPMMVGNWAQSILHG GVIASALDVAAGLVCVGSTLTRHDTINEEELRQRLSRMGTIDLRVDYLRPGRGERFTATS SLLRAGNKVAVARVELHNEAQVYIASATATYMVG >gi|289774337|gb|GG745517.1| GENE 32 31809 - 32702 1260 297 aa, chain + ## HITS:1 COG:STM3955 KEGG:ns NR:ns ## COG: STM3955 COG2962 # Protein_GI_number: 16767225 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 293 1 293 294 480 92.0 1e-135 MDAKQTRLGIILALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALISVSRQW PQVKKLLKTPRKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIF LGERFRRLQWLAVILAFCGVLVQLWTFGSLPIIGLGLAFSFAFYGLVRKKIAVDAQTGML VETLWLLPVAAIWLFGITDSPTSHMGENPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLS TLGFFQYIGPTLMFLLAVTFYGEVPGKDKMVTFGFIWVALAVFIVDALYTQRRLRRG >gi|289774337|gb|GG745517.1| GENE 33 32746 - 33696 1443 316 aa, chain - ## HITS:1 COG:ECs4746 KEGG:ns NR:ns ## COG: ECs4746 COG0598 # Protein_GI_number: 15834000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 573 92.0 1e-163 MLSAFQLENNRLTRLEADEIKHLASSVWVDLVEPDDDERSRVQTELGQNLATRPELEDIE ASARFFEDEDGLHIHSFFFFEDAEDHAGNSTVAFTIREGRLFTLRERELPAFRLYRMRVR NQTLVDGNAYELLLDLFETKIEQLADEIENIYSDLEKLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPAGQLEQAREILRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELHWSFGYPGAIVFMM LAGLAPYLYFKRKNWL >gi|289774337|gb|GG745517.1| GENE 34 34052 - 36214 2939 720 aa, chain - ## HITS:1 COG:ECs4743 KEGG:ns NR:ns ## COG: ECs4743 COG0210 # Protein_GI_number: 15833997 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 720 1 720 720 1398 96.0 0 MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN NGRLGKKLWTDGTDGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD RTLDVVRQTSRDRQLTLWQACRELLKEKVLAGRAASALQRFMELIDALAQETADMPLHVQ TDRVIKDSGLRAMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRATVSRPVNHQRLG APIAESDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV >gi|289774337|gb|GG745517.1| GENE 35 36278 - 36994 683 238 aa, chain - ## HITS:1 COG:STM3950 KEGG:ns NR:ns ## COG: STM3950 COG1011 # Protein_GI_number: 16767220 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 238 1 238 238 375 75.0 1e-104 MRFYRPLGQISALTFDLDDTLYDNRPVIDRTMHESLAFVRNYHPSLSQFDAHELNQLRQT LLASEPEIYHDVTVWRHRALELGMRNAGLSAAQAKAGADAAMENFAHWRSRVDVPQETHD TLAKLAEKWPLVAITNGNARPELFGLNDYFRFVLRAGPDGRSKPFADMYHLAAARLNLPL GHILHVGDDLTTDVAGSLRCGMQACWIKPQGADLMHTADSRLLPHIEISRLASLTSLI >gi|289774337|gb|GG745517.1| GENE 36 36994 - 37896 1022 300 aa, chain - ## HITS:1 COG:STM3949 KEGG:ns NR:ns ## COG: STM3949 COG4973 # Protein_GI_number: 16767219 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Salmonella typhimurium LT2 # 1 300 1 300 300 545 91.0 1e-155 MTDSPLFACVDRFLRYLGVERQLSPITLTNYQRQLDALIVLADEAGLKSWQQCDAAQVRS FAVRSRRAGLGPASLALRLSALRSFFDWMVSQGELAANPAKGIAAPKIPRHLPKNIDVDD VNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVNLDIKHLDLESGEVWVMGKGSKERR LPIGRNAVAWIEHWLDLRGLFGTDDDALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVH PHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >gi|289774337|gb|GG745517.1| GENE 37 37893 - 38600 714 235 aa, chain - ## HITS:1 COG:yigA KEGG:ns NR:ns ## COG: yigA COG3159 # Protein_GI_number: 16131662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 234 1 234 235 351 78.0 8e-97 MKPIGEEQQEVTSALNDRAVVDYLLQHPEFFIRNAAQVEHIRVPHPVRGSISLVEWHMMR ARNHIHVLEENMSLLMEQAVANESLFQRLLQLQTRLAAAESLDDMLNRLHRWARELGLAG ATVRLFPDCWRLGAPSKFTHLALSRQAFEPIRIQRLGQARHYLGPLNGPELLVVLPEAKA IGSVAMSMLGGDNAPGVMLFSSRDAQHYQSGQGTQLLQEIAQMLPGLLERWIERA >gi|289774337|gb|GG745517.1| GENE 38 38597 - 39421 950 274 aa, chain - ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 547 95.0 1e-156 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPDLDFHY RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDDLVRVNMGE PNFEPSQVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVDTAAVETLGPVME SHERFPERANIGFMQVVGRSHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAETVRV ELPGGRLDIAWKGPGQPLFMTGPAAHVYDGFIHL >gi|289774337|gb|GG745517.1| GENE 39 39457 - 39660 207 67 aa, chain - ## HITS:1 COG:STM3946 KEGG:ns NR:ns ## COG: STM3946 COG5567 # Protein_GI_number: 16767216 # Func_class: N Cell motility # Function: Predicted small periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 67 1 67 67 85 74.0 2e-17 MKNVFPTLAVLFAIFSLTGCGLKGPLYFPPADKTAPPPTKPVNPGIQSSTPDRNDRGDTG GPSQVNY >gi|289774337|gb|GG745517.1| GENE 40 39799 - 40119 598 106 aa, chain + ## HITS:1 COG:STM3943 KEGG:ns NR:ns ## COG: STM3943 COG1965 # Protein_GI_number: 16767214 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 192 92.0 1e-49 MNDSEFHRLADSLWMTIEERLDDWDGDSDIDCEINGGVLTISFENGSKIIINRQEPLHQV WLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAASQQAGETVKFR >gi|289774337|gb|GG745517.1| GENE 41 40253 - 42805 3482 850 aa, chain - ## HITS:1 COG:ECs4736 KEGG:ns NR:ns ## COG: ECs4736 COG3072 # Protein_GI_number: 15833990 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Escherichia coli O157:H7 # 1 850 1 848 848 1669 93.0 0 MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPRG ICLYTPDETQRHYLEELELHRGMQTQEPPKGELPITGVYSMGSTSSVGQSCSSDLDIWVC HQAWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHI LLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMGLYAQGVLTPNEWLDLGGLSSLSA EEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNNRLLAKDIKQRLHDGEIVSFGLD PYCMMLERVTTYLQAIEDETRLDLVRRCFYLKVCEKLSRERACVGWRREVVSQLVNAWGW DEKRLMMLDNRANWKIDEVRKAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTR KLYAAFEALPGKVTLVNPQISPDLSEPNLTFIHVPPGRANRTGWYLYNRAPDMESIISHQ PLEYNRYLNKLVAWAWFNGLLTSRTRLFIKGNGIVDLAKLQEMVADVSHHFPLRLPAPTP KALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGEEQKCLIGSVDLLYRN SWNEVRTLHFNGEQAMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQMISE CIELRLSSTRQDTGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSV QVETNHVKLPAVVDGFASEGIIQFFFEDADNNDSGFNIYILDESNRAEVYHHCEGSKEEL VRDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVEVDGRTQVIPFRTQAIAAAIPTSQDVT ASPVLQQRYS >gi|289774337|gb|GG745517.1| GENE 42 43163 - 44104 912 313 aa, chain + ## HITS:1 COG:STM3938 KEGG:ns NR:ns ## COG: STM3938 COG0181 # Protein_GI_number: 16767209 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Salmonella typhimurium LT2 # 1 312 6 317 318 499 83.0 1e-141 MLDKVLKIATRQSPLALWQAQYVKARLEQAHPGLNVELVPMVTRGDVILDTPLAKVGGKG LFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDELP AGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLKLE ARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRLEG GCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNGAR DILAAVYDGEAPR >gi|289774337|gb|GG745517.1| GENE 43 44101 - 44841 533 246 aa, chain + ## HITS:1 COG:STM3937 KEGG:ns NR:ns ## COG: STM3937 COG1587 # Protein_GI_number: 16767208 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 390 81.0 1e-108 MSILVTRPLPQGEALVSRLRAMGRVAWSFPLIEFTPGRELPVLGDHLAHLGSDDLLFALS QHAVEFAHARLQQQGLPWPTSPHYFAIGRTTALALHTVSGQHIRYPLDREISEVLLQLPE LQNIAGKNALILRGNGGRELLGATLAERGARVTFCECYQRSAKHYDGAEEAMRWQSRGVT TLVVTSGEMLQQLWSLIPQWYREQWLLHCRLVVVSERLALQARELGWQEIQVADNADNDA LLRALQ >gi|289774337|gb|GG745517.1| GENE 44 44863 - 46044 1259 393 aa, chain + ## HITS:1 COG:hemX KEGG:ns NR:ns ## COG: hemX COG2959 # Protein_GI_number: 16131655 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli K12 # 1 393 1 393 393 479 80.0 1e-135 MTEQQNQSAVVEETREAVETTPQPENNDKKKAGNKTSLALSAIAIAIAIAAGIGLYGLNK QQATRQNATTSELSGQLAALQKAQESQKSELEGIIKQQADQLSQAKHEQETLTKQLDELQ QKVAVISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLIG ARRAITDDIATLSAVSQVDYDGMILKVNQLANQIDNLRLADNNDDDSPMDSDSDELSSSI SEWRVNLQKSWQNFMDSFITVRRRDETAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQE ETWKQSLDNVSTWVRAYYDTDDATTKAFLDEVDKLSQQSITMTVPETLQSQALLEKLMQT RVRNLMAQPAVTAGGAPSPAPAAPAAPAAPQGE >gi|289774337|gb|GG745517.1| GENE 45 46048 - 47244 1597 398 aa, chain + ## HITS:1 COG:ECs4732 KEGG:ns NR:ns ## COG: ECs4732 COG3071 # Protein_GI_number: 15833986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 12 396 12 396 398 668 91.0 0 MLKILLLFALLIAGIVLGPMIAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEW LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN YLLAAEAAQQRGDEARANQHLERATELAGDDLIPVEITRVRLQLARNENHAARHGIDKLL EITPRHPEVLRLAEQAYTRTGAWQSLLDIIPSMAKANVGDEEHRAALEQLAWVGLMDKAL ADGGSEGLREWWRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVM PIPRLKTNNPEQLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPD AFDYAWLADALDRLHQPEEAAAMRRDGLLLTLQNNPQP >gi|289774337|gb|GG745517.1| GENE 46 48245 - 49630 1914 461 aa, chain - ## HITS:1 COG:STM3930 KEGG:ns NR:ns ## COG: STM3930 COG1113 # Protein_GI_number: 16767205 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 461 1 461 461 756 91.0 0 MTEKKAELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIM RSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP EMAQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVVGLGVIFFGFGNGG HSIGFGNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV LWRILIFYVGAIFVIVTIFPWDQIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCN SGMYSCGRMLYALAKNRQLPAAIGKVSRNGVPAVGVALSILILLVGSCLNYIIPNPQRVF VYVYSASVLPGMVPWFVILISQLRFRRVHRAAITSHPFRSLLFPWSNYFTMAFLICVLVG MGLNDETRMSLFVGIIFLAAVTLIYKVFGLGRQGQVNNTAE >gi|289774337|gb|GG745517.1| GENE 47 49836 - 50576 759 246 aa, chain - ## HITS:1 COG:STM3929 KEGG:ns NR:ns ## COG: STM3929 COG1922 # Protein_GI_number: 16767204 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 411 81.0 1e-115 MTGTISAPLYLLRGLQLIGWRDMQHALDYLYADGALREGTLVAINAEKMLAVEDNPEVRA LIEAAEFKYADGISVVRSLRKKYPQAQVSRVAGADLWEALMQRAGAEGTPVFLVGGKHEV LTQTESRLRQRWQVNIVGSQDGYFTPEQRQALFERIRDSGAKIVTVAMGSPRQEIFMRDC RRLYPHALYMGVGGTYDVFTGHVHRAPKFWQDLGLEWFYRLLLQPSRIKRQFRLLRYLRW HYTGKL >gi|289774337|gb|GG745517.1| GENE 48 50588 - 51934 1913 448 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4934 NR:ns ## KEGG: Kvar_4934 # Name: not_defined # Def: WzyE family protein # Organism: K.variicola # Pathway: not_defined # 1 448 1 448 448 750 100.0 0 MTLMQFSGLLVVWLLSTLFIATATWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSILVFR FDVSVAPPEILLQTLLIAVCFYAIYYVTYKTRLRPASREVAHRPLFTMNRVETHLAWGIL MGLALLCVGIFFAHNGFLLFKLNSYSQIFSAEVSGVALKRFFYFFIPAMLVVYFLRQDYK AWIFFLVSTVAFGLLTYAIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM FWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDKIDFQGLAPMIRDFYVF IPSWMWHGRPTMVLNTANYFTWEVLNNHSGLAISPTLIGSLVVMGGVWFVPLGAVAVGLI IKWFDWLYELGNRESNRYKAAILHSFCFGAIFNMIVLAREGLDSFGSRVVFFLVIFGICL LAAKLLYWFLDSVGLIHKRVKPLSQPQV >gi|289774337|gb|GG745517.1| GENE 49 51931 - 53007 1322 358 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4935 NR:ns ## KEGG: Kvar_4935 # Name: not_defined # Def: 4-alpha-L-fucosyltransferase # Organism: K.variicola # Pathway: not_defined # 1 358 1 358 358 739 100.0 0 MTALIHVLGSDIPHHNQTVLRFFNDELAADPQARRFLVVGDEASVRDGYPALDITCYPGK KALAQAVIATAKANRQQRFFFHGQFNTGLWLALLSGGIRPSQFNWHIWGADLYENSASLK FRLFYPLRRMAQGRVGRVFATRGDLSWFANRHPRVPGELLYFPTRMDPALNTLADNAPRG DTLTILVGNSGDRSNEHIAALKAIHQQFGDTVNVIVPMGYPANNDAYINEVREAGAALFS RAHLQILSEKLEFNDYLALLRRCDLGYFLFARQQGIGTLCLLIQAGIPCVLNRENPFWQD MTEQHVPVLFTSDALDVSVVREAQRQLASVDKSTIAFFRPNYLTGWQRALRLAAEGQA >gi|289774337|gb|GG745517.1| GENE 50 53004 - 54254 1567 416 aa, chain - ## HITS:1 COG:STM3926 KEGG:ns NR:ns ## COG: STM3926 COG2244 # Protein_GI_number: 16767201 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Salmonella typhimurium LT2 # 1 416 1 416 416 615 87.0 1e-176 MSLAKASLWTAASTLVKIGAGLLVVKLLAVSFGPAGVGQAGNFRQLVTVLGVLAGAGIFN GVTKLVAQHHDDPPRLKQVVGTSSAMVLGFSTLLALVFLLAAAPISQGLFGHTHYQGLVR LVALVQMGIAWANFLLALMKGFRDAAGNAFSLIAGSLIGVAAYYACYYFGGYQGALLGLA LVPALVVIPAGIMLWRRGNIPLSALRPRWDNSLAGQLSKFTLMALITSVTLPVAYVMMRN LLAAHYGWEAVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLSAKTDITREIAKSLKFV LPAVAAASLTVWLLRDFAIWLLFSDRFTAMRDLFAWQLVGDVLKVGAYVYGYLVIAKASL RFYILTEISQFTLLTAFSHWLIPAHGAIGAAQAYMATYIVYFALCSGVFLLWRKRA >gi|289774337|gb|GG745517.1| GENE 51 54256 - 55386 1473 376 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 376 1 376 376 729 90.0 0 MIPFNAPPVVGTELDYMQSAMNSGKLCGDGGFTRRCQQWMEQRFGTAKALLTPSCTASLE MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGARIVFVDIRRDTMNIDETLIEAAITDKT RAIVPVHYAGVACEMDTIMAIADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET KNYTAGGEGGATLINDRTLVERAEIIREKGTNRSQFFRGLVDKYTWRDIGSSYLMSDLQA AYLWAQLEAAERINQQRLALWQNYHDALLPLARAGRIELPTVPADCGQNAHMFYIKLRDI EDRSRLIAWLKEAEILAVFHYIPLHSCPAGEHFGEFHGEDRYTTQESERLVRLPLFYNLS LVNQRTVINSLLSYFS >gi|289774337|gb|GG745517.1| GENE 52 55391 - 56065 744 224 aa, chain - ## HITS:1 COG:wecD KEGG:ns NR:ns ## COG: wecD COG0454 # Protein_GI_number: 16131646 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 44 224 1 181 181 258 79.0 7e-69 MPVRASIDPLEWENRFFAVNSAIVHFDERAPRLTPEALAGWSRVQAKVAASDTVRLDALQ QLGFQLVEGEVDLALPVGNPADAGADVAVEADIAPLRELAAQAFAMSRFRAPWYAADASG RFYAQWIENAVRGTFDHQCLIYRHPEGDIRAFVSLRQLNATEARIGLLAGRGAGAQLMQA AQHWAASRGLSTLRVATQMGNTAALKRYILSGANVESTAYWLYR >gi|289774337|gb|GG745517.1| GENE 53 56043 - 56924 1013 293 aa, chain - ## HITS:1 COG:rffH KEGG:ns NR:ns ## COG: rffH COG1209 # Protein_GI_number: 16131645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 293 1 293 293 548 91.0 1e-156 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPDDLRD FQRLLGDGSEFGIALHYAVQPTPDGLAQAFIIGEAFLNGEPACLVLGDNIFFGQSFSPKL RSVAARTEGATIFGYQVMDPERFGVVEFDDNFRALSLEEKPKQPKSNWAVTGLYFYDGKV TEYAKRVKPSERGELEITSINQMYLEDGALTVELLGRGFAWLDTGTHDSLIEASMFVQTV EKRQGFKIACLEEIGWRNGWLDDDGVKRAAKRLEKTGYGQYLLDLLRARPRQY >gi|289774337|gb|GG745517.1| GENE 54 56943 - 58010 1349 355 aa, chain - ## HITS:1 COG:ECs4721 KEGG:ns NR:ns ## COG: ECs4721 COG1088 # Protein_GI_number: 15833975 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli O157:H7 # 1 355 1 355 355 657 87.0 0 MRTILVTGGAGFIGSAVVREIIQHTADRVVVVDKLTYAGNLMSLAPVAQDARFAFEQVDI CDRGELDRIFRQHQPDTVMHLAAESHVDRSIDGPAAFIETNILGTYTLLEAARSWWNTLA TEKKSAFRFHHISTDEVYGDLHGSEDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTLITNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGQQIRDWLYVEDHARALYLVA TRGEPGETYNIGGHNERKNIEVVETICQLLEELAPHKPQSVVHYHDLITFVADRPGHDLR YAIDASKIARELGWTPAETFTSGMRKTVAWYLANESWWRQVQDGSYQGERLGLQG >gi|289774337|gb|GG745517.1| GENE 55 58007 - 59269 1519 420 aa, chain - ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 756 87.0 0 MSFSTISVIGLGYIGLPTAAAFASRQKRVVGVDVNQHAVETINRGEIHIVEPDLASVVKT AVEQGYLSATTTPVEADAYLIAVPTPFKDRHEPDMVFVESAAKSIAPTLKKGSLVILEST SPVGSTEQMAGWLAEMRPDLSFPQQAGDAADVNIAYCPERVLPGQVMVELIKNDRVIGGM SPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPEWVI EQVKAQVADCLNATNKRASELTIACFGLAFKPNIDDLRESPAMEIAAQIARWHSGTTQVV EPNIHALPKKLDGLCTLATLDAALASADVLVMLVDHNEFKAVSGDSVTQAYIIDTKGVWR >gi|289774337|gb|GG745517.1| GENE 56 59266 - 60351 1106 361 aa, chain - ## HITS:1 COG:STM3920 KEGG:ns NR:ns ## COG: STM3920 COG0381 # Protein_GI_number: 16767195 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Salmonella typhimurium LT2 # 1 361 16 376 376 615 82.0 1e-176 MAPLVHALAKDPHFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMKPGQGLTEITCRIL EGLKPVLESFKPDVVLVHGDTTTTMAASLAAFYQRIPVGHVEAGLRTGDLSSPWPEEGNR TLTGHLATYHFAPTETSRQNLLRENIADSRITVTGNTVIDALFWVRDRVLGDEALRETLL QRYPFISHGKKMILVTGHRRESFGLGFEQICQALAEIAHTHPEVQIVYPVHLNPNVSEPV NRILGHIDNVMLIEPQDYLPFVWLMDRAWLILTDSGGIQEEAPSLGKPVLVMRDMTERPE AVAAGTVCLVGTDSQRIVAEVTRLLQDDAAYQAMSRAHNPYGDGEACRRILSALKNNQVT L >gi|289774337|gb|GG745517.1| GENE 57 60453 - 61469 757 338 aa, chain - ## HITS:1 COG:STM3919 KEGG:ns NR:ns ## COG: STM3919 COG3765 # Protein_GI_number: 16767194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Salmonella typhimurium LT2 # 1 338 11 348 348 574 84.0 1e-164 MNVENELDIRGLFRALWAGKGWIVGGAVLFAAIVLVYTFFARQEWSATAITDRPTVNMLG GYYSQQQFLRNLDIKADLASVDQPSAMDEAYKEFIMQLASWDTRRDFWLQTDYYKQRQSG NARADAAMLDDLINNIQFMPGDAAKSINDSVKLTAETGQDANNLLRQYVAFASQRAAGHL NDELKGAWAARTVQMKAQVKRQEEVAEAIFNRRTHSVEQALKVAQQHNISRSETDVPADQ LPDSELFLLGRPMLQARLENLQAVGPEYDLDYDQNRAMLSTLNVGPTLDPRFQTYRYLRT PEEPVKRDSPRRVFLMVMWGIVGALIGAGVALSRRRVL >gi|289774337|gb|GG745517.1| GENE 58 61513 - 62517 972 334 aa, chain - ## HITS:1 COG:ECs4717 KEGG:ns NR:ns ## COG: ECs4717 COG0472 # Protein_GI_number: 15833971 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Escherichia coli O157:H7 # 1 334 34 367 367 526 86.0 1e-149 MDKPNYRKRHQGLIPLVGGISVYAGICFTFAIADYYIPHASLYLACAGVLVLVGALDDRF DISVKIRAVIQAAIAVIMMMAGNLHLSSLGFIFGSWELVLGPFGFFLTLFAVWAAINAFN MVDGIDGLLGGLSSVSFAATGIILWFDGQYSLAMWCFAMIAAILPYILLNLGALGRRYKV FMGDAGSTMIGFTIIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPF SPDRQHIHHLIMRAGFTSRQAFVLITLAAALLALVGVAAEYTRIVPEWVMLILFLVAFFL YGYCIKRAWKVARLVKRIRRRIRRHSGNNPKLTK >gi|289774337|gb|GG745517.1| GENE 59 62857 - 64116 1643 419 aa, chain - ## HITS:1 COG:STM3917 KEGG:ns NR:ns ## COG: STM3917 COG1158 # Protein_GI_number: 16767192 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Salmonella typhimurium LT2 # 1 419 1 419 419 813 99.0 0 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS >gi|289774337|gb|GG745517.1| GENE 60 64449 - 64778 514 109 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 109 19 127 127 217 97.0 5e-57 MSDKIIHLTDDSFDTDVLKADGLTLVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLN IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA >gi|289774337|gb|GG745517.1| GENE 61 65120 - 66385 1429 421 aa, chain + ## HITS:1 COG:rhlB KEGG:ns NR:ns ## COG: rhlB COG0513 # Protein_GI_number: 16131636 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 421 1 421 421 838 96.0 0 MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT MAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRARPGNGPRRNGPPRNRRRS G >gi|289774337|gb|GG745517.1| GENE 62 66504 - 68012 1727 502 aa, chain + ## HITS:1 COG:ECs4712 KEGG:ns NR:ns ## COG: ECs4712 COG0248 # Protein_GI_number: 15833966 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 5 495 3 493 494 824 85.0 0 MKSMSSTSLYAAIDLGSNSFHMLVVREVAGSIQTLSRIKRKVRLAAGLNSDNTLSAEAME RGWQCLRLFAERLQDIPPTQIRVVATATLRLAVNAEEFLAKAQEILGTPVQVISGEEEAR LIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRSLT KENFDLAEAAAREVLLPIADVLRYHGWKVCVGASGTVQALQEIMMAQGMDERITLAKLQQ LKQRAIQCGRLEELEIEGLTLERALVFPSGLAILIAIFSELNIQCMTLAGGALREGLVYG MLHLSVEQDIRSRTLRNIQRRFMIDTEQAQRVASLASHLLSQLDGSWELDPLSRDLLLSA CSLHEIGLSVDFKRAPQHAAYLVNNLDLPGFTPAQKKLIATLLLNQTNAIDLSSLHQQNA VPPRVAEHLCRLLRLAILFASRRRDDLLPAIQLAAHDDQLTLTLPENWLAEHPLGREMVD QECQWQSYVHWTLRVTSGDTPR >gi|289774337|gb|GG745517.1| GENE 63 68032 - 68958 510 308 aa, chain + ## HITS:1 COG:RSc1092 KEGG:ns NR:ns ## COG: RSc1092 COG0583 # Protein_GI_number: 17545811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 293 4 294 300 189 35.0 5e-48 MREELDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMM PTPRADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQ QAADGITFTVQNLDEQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPR IRTQLRAEDWRQEKHLAIRVEGTAHSDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDM IAVVPEQVARHITRRYPCRSWPLPFPLARIAIRQVWHQRLHRDPGHIWLRSLIAALADPA QQSGSITI >gi|289774337|gb|GG745517.1| GENE 64 69089 - 70087 1247 332 aa, chain + ## HITS:1 COG:AGc4595 KEGG:ns NR:ns ## COG: AGc4595 COG2159 # Protein_GI_number: 15889794 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 331 1 324 327 268 44.0 8e-72 MRGKIALEEHVSTPENNRLWDSTGEAGRNGTEYMKDVERRLLDRSIQLEEMAQRHIDHVI LSLTSPGAQSILDKAKAVSFARDTNDFIVENYVKPNPDKFSAFATLALQNPEAAAEELER AVKKLGMKGALINGYTNVKDSEHGLYLDDESMLVFWDKVNELNVPVYLHPREPLEGPARG IYTGYESLIGSAWGFAQETAVHAIRLMMSGLFDRYPNLNLVLGHLGEGLVHMLPRTQHRL YRQRFGCGLGKAEKPLMHYLQNNFIVTTSGHFNTHSLNNAIEVMGADRVMFSVDYPYEDI HQACDWFDPLELEAGLKDKIAWGNASRVFNIQ >gi|289774337|gb|GG745517.1| GENE 65 70150 - 70872 947 240 aa, chain + ## HITS:1 COG:CAC1482 KEGG:ns NR:ns ## COG: CAC1482 COG1811 # Protein_GI_number: 15894761 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Clostridium acetobutylicum # 1 239 1 238 242 189 43.0 5e-48 MAIGIFVCSGSLLVGALAGASLNRFIPEHFKKTLPLIAGLISISMGIHFVNKLHNLPPIA LAIIVGTIIGGLLNIEKWIERAGTTLRTPIERIFPAQASASVSAEDFMNQFIAVLILFCA SGTGIFGALTEGMTGDPTILLTKSILDFFTAAIFASTLGYIITVIFIPQLIVFIILFFAA TFIMALINPAMIADFTACGGIIMLATGFRLCGIRAFPTANMLPSLLLVMPFSAAWQQFVA >gi|289774337|gb|GG745517.1| GENE 66 70878 - 72899 2702 673 aa, chain - ## HITS:1 COG:STM3912 KEGG:ns NR:ns ## COG: STM3912 COG0210 # Protein_GI_number: 16767188 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 671 1 671 674 1272 94.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQVALLKEL TEGLIEDDKVVLQQLISTISNWKNDLKTPSQAAAGAKGERDRIFAHCYGLYDAHMKACNV LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVV GDDDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEDHEAERVAGELIAHHFINKTNYKDYAILYRGNHQSRVFEK MLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQK LGEWAMSRNKGLFTASFDMGLSQTLTGRGYESLTRFTHWLREIQQLAEREPVAAVRDLIR GIDYESWLYETSPSPKAAEMRMKNVNQLFTWMTEMLEGSEIDEPMTLTQVVTRFTLRDMM ERGESDEELDQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVISAEERMHKGQANV ANIKAMLAKAKKG >gi|289774337|gb|GG745517.1| GENE 67 73012 - 73293 279 93 aa, chain + ## HITS:1 COG:YPO3873 KEGG:ns NR:ns ## COG: YPO3873 COG0760 # Protein_GI_number: 16124006 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Yersinia pestis # 1 92 1 92 93 137 68.0 7e-33 MAKSAAALHILVKEEKLAHEILAKLERGISFDHLAKRYSKCPSGRHGGDLGEFPQGTMVG PFDQAVFSCPLLKPYGPVKTKFGYHIIKVLYRR >gi|289774337|gb|GG745517.1| GENE 68 73345 - 73626 340 93 aa, chain + ## HITS:1 COG:ECs4709 KEGG:ns NR:ns ## COG: ECs4709 COG0760 # Protein_GI_number: 15833963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 92 1 92 93 177 96.0 3e-45 MAKTAAALHILVKEEKLALDLLEQLKGGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP AFDKVVFSCPELEPTGPLHTQFGYHIIKVLYRK >gi|289774337|gb|GG745517.1| GENE 69 73829 - 75304 2168 491 aa, chain - ## HITS:1 COG:STM3909 KEGG:ns NR:ns ## COG: STM3909 COG0059 # Protein_GI_number: 16767185 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Salmonella typhimurium LT2 # 1 491 1 491 491 951 98.0 0 MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSG LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVVNLTPDKQHSDVVRSVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VAEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLF QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVL MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFSYACVPLLKEFMTTLQTGDLGKAIAEGAVDNAQLRDVNEAIRSHAIEQVGKKLRGY MTDMKRIAVAG >gi|289774337|gb|GG745517.1| GENE 70 75459 - 76349 918 296 aa, chain + ## HITS:1 COG:ilvY KEGG:ns NR:ns ## COG: ilvY COG0583 # Protein_GI_number: 16131631 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 296 1 296 297 545 96.0 1e-155 MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA GEELRTFAQQTLLQYQQLRHAIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAAHPSV EIKLSTGDAADAMEKVVTGEADLAIAGKPETLPGSVAFSMLENLAVVLIAPALPCPVRNQ VTVERPDWSTVPFIMADQGPVRRRIELWFRRHKISNPSIYATVGGHEAMVSMVALGCGVA LLPEVVLENSPEPVRNRVMILERSDEQTPFELGVCAQKKRLHEPLIDAFWKILPNH >gi|289774337|gb|GG745517.1| GENE 71 76346 - 77890 1757 514 aa, chain - ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 967 95.0 0 MADSQPLSGAPEGAEYLRAVLRAPVYEAVQKTPLQKMEKLSSRLDNVILVKREDRQPVHS FKLRGAYAMMSSLTAEQKSNGVITASAGNHAQGVAFSASRLGVKALIVMPVATADIKVDA VRGFGGEVLLHGANFDEAKARAIELAQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHI DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE GVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYV AQHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG GRSVTEFNYRFADAKDACIFVGVRLSRGLEERKEILQLLNDGGYSVVDLSDDEMAKLHVR YMVGGRPSKALQERLFSFEFPESPGALLKFLHTLGTHWNISLFHYRSHGTDYGRVLAAFE LGEHEPDFETRLNELGYECHDETHNPAFRFFLAG >gi|289774337|gb|GG745517.1| GENE 72 77893 - 79743 2205 616 aa, chain - ## HITS:1 COG:ECs4705 KEGG:ns NR:ns ## COG: ECs4705 COG0129 # Protein_GI_number: 15833959 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1180 96.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDKIIKLDLVDAMIQGADPKVSDEQ SNQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKELFLNAGKRIV ELTKRYYEQDDASALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVLGILGELDRAGLLNRDVKNVLGLTLPQT LEQYDVMVTQDDAVKKMFRAGPAGIRTTQAFSQDCRWDTLDDDRAEGCIRSLEHAYSKDG GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDEAVDAILGGKVVEGDVVVIRY EGPKGGPGMQEMLYPTTFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGNIAI IEDGDMIAIDIPNRGIQLQLSDAEIAARREAQEARGDKAWTPKDRERQVSFALRAYASLA TSADKGAVRDKSKLGG >gi|289774337|gb|GG745517.1| GENE 73 79804 - 80733 1181 309 aa, chain - ## HITS:1 COG:ECs4704 KEGG:ns NR:ns ## COG: ECs4704 COG0115 # Protein_GI_number: 15833958 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 605 94.0 1e-173 MTTKKADYIWFNGEMTPWGEAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQR LHDSAKIYRFPVSQSVDELMEACREVIRTNKLTSAYIRPLVFVGDVGMGVNPPDGYKTDV IIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKDLGIEVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGAGRRGPVTKRIQEAFFGLFTGETEDK WGWLDPVSK >gi|289774337|gb|GG745517.1| GENE 74 80753 - 81010 230 85 aa, chain - ## HITS:1 COG:ECs4703 KEGG:ns NR:ns ## COG: ECs4703 COG3978 # Protein_GI_number: 15833957 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 85 1 87 87 112 79.0 2e-25 MKQHQVALQARFNPETLERVLRVVRHRGFQICAMNMETASDAQNINIELTVASPRPVELL FSQLSKLVDVACVEIQQPTSQQIRA >gi|289774337|gb|GG745517.1| GENE 75 81007 - 82653 1588 548 aa, chain - ## HITS:1 COG:STM3901 KEGG:ns NR:ns ## COG: STM3901 COG0028 # Protein_GI_number: 16767177 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Salmonella typhimurium LT2 # 1 548 1 548 548 1011 90.0 0 MNGAQWVVHALRTQGVDTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARA TGKTGVCIATSGPGATNLITGLADALLDSIPIVAITGQVAAPFIGTDAFQEVDVLGLSLA CTKHSFLVQSLDELPRVIAEAFQVANSGRPGPVLVDIPKDIQMAQGELDPHFSTVDDEMA FPQAEVAQALQMLAQSQKPMLYVGGGVGMAQAVPALREFLAVTRMPATCTLKGLGVVAAD YPYYLGMLGMHGTKAANLAVQECDLLIAVGARFDDRVTGKLNTFAPHAKVIHMDIDPAEL NKLRQAHIGLTGDLNRLLPALQQPLAIDAWREHNAALRTEHAWRYDHPGEAIYAPLLLKQ LSDRKPADSVVTTDVGQHQMWSAQHMTYTRPENFITSSGLGTMGFGLPAAVGAQVARPDD TVICISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTD NPDFLTLASAFGIPGQHITRKDQVEAALDTMLSSQGPYLLHVSIDELENVWPLVPPGASN AEMLEKLS >gi|289774337|gb|GG745517.1| GENE 76 83247 - 84767 561 506 aa, chain + ## HITS:1 COG:STM3899 KEGG:ns NR:ns ## COG: STM3899 COG0606 # Protein_GI_number: 16767175 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Salmonella typhimurium LT2 # 1 506 1 506 506 749 77.0 0 MSLAIVYTRAALGIEAPLITIEVHLSSGLPGLTMVGLPETTVKEARDRVRSALINSGYAF PAKKITINLAPADLPKEGGRYDLPIALALLVASEQLNTTRLNQYEFVGELALTGGLRGVP GAIPSAMEAIKAGRRIVVSSDNAAEVGLIGGSDCLVADHLQQVCAFLAGQASLSPPLADV AAVDERCEDLRDVIGQQQGKRALEIVAAGGHNLLLIGPPGTGKTMLACRLPGLLPPLSNQ EALESTAIQSLVNLQTAKTRWRQRPFRAPHHSASLAAMVGGGSIPVPGEISLAHNGVLFL DELPEFERRVLDALREPIESGKIHISRSRAKIDYPARFQLIAAMNPSPTGHYQGKHNRAS PEQTLRYLGRLSGPFLDRFDLSLEIPLPPPGILSQGTQGEESSATVRQRVLAARERQMLR QNKLNAHLENREMKSCCHLRQEDALWLEQTLTQLGLSIRAWQRLLKVARTIADLAEAEEI ERRHLQEALSYRAIDRMLNHLQKMMA >gi|289774337|gb|GG745517.1| GENE 77 84792 - 85130 442 112 aa, chain - ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 192 89.0 1e-49 MAESFTTTNRFFDNKNYPRGFSRHGDFTIKEAQLLERHGYAFNELELGKREPVTDDEKQF VSVCRGEREPVTEAERVWIKYMARIKRPKRFHTLSGGKPQMEGADDYTESDD >gi|289774337|gb|GG745517.1| GENE 78 85219 - 86070 655 283 aa, chain + ## HITS:1 COG:STM3897 KEGG:ns NR:ns ## COG: STM3897 COG0583 # Protein_GI_number: 16767173 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 7 283 1 280 282 445 82.0 1e-125 MTTNNFVENGVDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLENQLGVNLFTR HRNNIRLTTAGEKLLPYAETLMNTWQAARKEVAHSSRHNEFSIGASASLWECLLNGWLGT LYKDPYNLQFEARIAQRQSLVKQLHERQLDLLITTESPKMDELSCQLLGNFTLALYCAAP GKNKNDLNYLRLEWGPDFQQNEVGLIGSDDVPLLTTSSAELAYQQLSTLNGCTWLPVSWA QQKSGLHTVTDSVTLSRPLYAIWLQNSDKQAHIREILKSSILE Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:08 2011 Seq name: gi|289774302|gb|GG745518.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.11, whole genome shotgun sequence Length of sequence - 38962 bp Number of predicted genes - 34, with homology - 34 Number of transcription units - 15, operones - 10 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 170 - 229 2.7 1 1 Op 1 17/0.000 + CDS 327 - 1916 1912 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 2 1 Op 2 . + CDS 1932 - 3227 1633 ## COG0151 Phosphoribosylamine-glycine ligase + Term 3264 - 3307 3.7 - Term 3032 - 3068 -0.3 3 2 Op 1 13/0.000 - CDS 3217 - 4548 1557 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 4 2 Op 2 . - CDS 4535 - 5929 1370 ## COG0642 Signal transduction histidine kinase - Prom 5983 - 6042 2.9 5 3 Tu 1 . + CDS 6189 - 6626 585 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 6 4 Op 1 . - CDS 6630 - 7331 506 ## KPK_5291 putative lipoprotein 7 4 Op 2 6/0.167 - CDS 7338 - 7610 334 ## COG0776 Bacterial nucleoid DNA-binding protein 8 5 Op 1 4/0.667 - CDS 7797 - 8387 794 ## COG3068 Uncharacterized protein conserved in bacteria 9 5 Op 2 4/0.667 - CDS 8430 - 9101 702 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 10 5 Op 3 5/0.333 - CDS 9114 - 10178 1481 ## COG0407 Uroporphyrinogen-III decarboxylase 11 5 Op 4 . - CDS 10219 - 10992 759 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding - Prom 11026 - 11085 3.8 + Prom 10982 - 11041 5.2 12 6 Tu 1 . + CDS 11086 - 11583 626 ## COG3160 Regulator of sigma D + Term 11623 - 11666 -1.0 + Prom 11627 - 11686 2.4 13 7 Op 1 8/0.000 + CDS 11848 - 13743 2366 ## COG0422 Thiamine biosynthesis protein ThiC 14 7 Op 2 3/0.667 + CDS 13743 - 14378 821 ## COG0352 Thiamine monophosphate synthase 15 7 Op 3 5/0.333 + CDS 14371 - 15126 826 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 16 7 Op 4 16/0.000 + CDS 15110 - 15310 157 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 17 7 Op 5 5/0.333 + CDS 15312 - 16082 949 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 18 7 Op 6 . + CDS 16079 - 17212 1437 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes + Term 17259 - 17306 8.0 + Prom 17384 - 17443 6.3 19 8 Tu 1 . + CDS 17603 - 19060 1724 ## COG2199 FOG: GGDEF domain + Term 19078 - 19106 1.0 + Prom 19091 - 19150 6.0 20 9 Op 1 8/0.000 + CDS 19232 - 19537 397 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 21 9 Op 2 . + CDS 19541 - 19858 396 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Term 19689 - 19725 1.5 22 10 Tu 1 . - CDS 19902 - 21242 1573 ## COG2704 Anaerobic C4-dicarboxylate transporter - Term 21580 - 21627 11.7 23 11 Op 1 58/0.000 - CDS 21643 - 25866 4503 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit - Term 25884 - 25923 8.8 24 11 Op 2 28/0.000 - CDS 25943 - 29971 4063 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 30134 - 30193 3.3 - Term 30238 - 30285 7.6 25 12 Op 1 47/0.000 - CDS 30296 - 30661 562 ## PROTEIN SUPPORTED gi|152972844|ref|YP_001337990.1| 50S ribosomal protein L7/L12 26 12 Op 2 43/0.000 - CDS 30728 - 31225 797 ## PROTEIN SUPPORTED gi|16762302|ref|NP_457919.1| 50S ribosomal protein L10 - Prom 31334 - 31393 2.3 27 12 Op 3 55/0.000 - CDS 31639 - 32343 1149 ## PROTEIN SUPPORTED gi|206575922|ref|YP_002241079.1| ribosomal protein L1 28 12 Op 4 45/0.000 - CDS 32347 - 32775 705 ## PROTEIN SUPPORTED gi|206577888|ref|YP_002241080.1| ribosomal protein L11 - Prom 32865 - 32924 6.2 - Term 32847 - 32897 11.4 29 13 Op 1 46/0.000 - CDS 32932 - 33477 554 ## COG0250 Transcription antiterminator 30 13 Op 2 14/0.000 - CDS 33479 - 33862 425 ## COG0690 Preprotein translocase subunit SecE - Prom 33935 - 33994 5.5 31 13 Op 3 . - CDS 34814 - 34909 81 ## COG0050 GTPases - translation elongation factors - Prom 35158 - 35217 4.6 - TRNA 35025 - 35100 88.7 # Thr GGT 0 0 - TRNA 35106 - 35180 64.8 # Gly TCC 0 0 - TRNA 35296 - 35380 66.9 # Tyr GTA 0 0 - TRNA 35391 - 35466 91.8 # Thr TGT 0 0 32 14 Tu 1 . + CDS 35909 - 36835 924 ## COG1072 Panthothenate kinase + Term 36837 - 36873 2.3 - Term 36829 - 36857 1.0 33 15 Op 1 6/0.167 - CDS 36862 - 37824 662 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 34 15 Op 2 . - CDS 37821 - 38849 613 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 38871 - 38930 2.6 Predicted protein(s) >gi|289774302|gb|GG745518.1| GENE 1 327 - 1916 1912 529 aa, chain + ## HITS:1 COG:STM4176 KEGG:ns NR:ns ## COG: STM4176 COG0138 # Protein_GI_number: 16767430 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Salmonella typhimurium LT2 # 1 529 1 529 529 993 95.0 0 MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLADKGLPVTEVSDYTGF PEMMDGRVKTLHPKVHGGILGRRGQDDGIMQQHGIAPIDMVVVNLYPFAQTVAREGCSLE DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIINEMDANEGSLTLNTRFDLAIKAF EHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKQDMRYGENSHQQAAFYI EENVKEASVATATQLQGKALSYNNIADTDAALECVKEFNEPACVIVKHANPCGVAVSDSI LDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQ NVRVLVCGQWDTRVAGLDFKRVNGGLLVQDRDLGMVTAGELRVVSKRQPSEQELRDALFC WKVAKFVKSNAIVYAKDNMTIGIGAGQMSRVYSAKIAGIKAGDEGLEVKGSAMASDAFFP FRDGIDAAAAVGITCVIQPGGSIRDEEVIAAADEHGIAMIFTDMRHFRH >gi|289774302|gb|GG745518.1| GENE 2 1932 - 3227 1633 431 aa, chain + ## HITS:1 COG:STM4175 KEGG:ns NR:ns ## COG: STM4175 COG0151 # Protein_GI_number: 16767429 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Salmonella typhimurium LT2 # 1 428 1 428 429 794 93.0 0 MKVLVIGNGGREHALAWKAAQSPLVDTVYVAPGNAGTALEPSLQNVAIGVTDIPALLRFA QDENIDLTIVGPEAPLVIGVVDAFRAAGLTIFGPTEGAAQLEGSKAFTKDFLARHHIPTA EYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVKDMLAGNAFGDA GHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGNGDTGPNTGGMGAYSPAPVVT DEVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIM LRMKSDLVDLCLAACAGKLDEKTSEWDDRASLGVVVAAGGYPGNYNTGDEIFGLPQQEAA DGKVFHAGTKLADDQRVVTNGGRVLCVTALGETVAQAQQRAYQLLTDIRWDGSFSRNDIG WRAIEREKANG >gi|289774302|gb|GG745518.1| GENE 3 3217 - 4548 1557 443 aa, chain - ## HITS:1 COG:hydG KEGG:ns NR:ns ## COG: hydG COG2204 # Protein_GI_number: 16131834 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 443 1 441 441 706 82.0 0 MSSDKVQILVVDDDISHCTILQALLRGWGYQVALAHNGLQALEQIHQQVFDLVLCDIRMA EMDGIATLKEIKAYNPAIPVLIMTAFSSVGTAVEAIKSGALDYLVKPLDFDTLQQTLVQA LAHTQQSESDPSVATDSRWGMIGDSPAMRALINNIMLVAPSDATVLICGESGTGKELVAR AIHACSERREKPLVTLNCAALNESLLESELFGHEKGAFTGADRRREGRFVEADGGTLFLD EIGDISPLMQVRLLRAIQEREVQRVGSNQTLAVDVRLIAATHRNLAEEVSAGRFRQDLYY RLNVVTIDMPPLRQRREDIPLLAQHFLKRYAERNRKTVQGFTPQAMDLLIHYPWPGNIRE LENAVERAVVLLTGNYISERELPLAIAGTPLPSGGSENALIQPLVEVEKEVILAALEKTG GNKTEAARQLGITRKTLLAKLSR >gi|289774302|gb|GG745518.1| GENE 4 4535 - 5929 1370 464 aa, chain - ## HITS:1 COG:STM4173 KEGG:ns NR:ns ## COG: STM4173 COG0642 # Protein_GI_number: 16767427 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 8 460 8 465 465 545 66.0 1e-155 MKIKPFSRHAAADALSWLLTGAMVLLVMLFSVMIVRDYGRETTAARQTIEEKGSVLIRAL ESGTRVGMGMRMHHAQLQALLEEMAWQPGVLWFAVTDENGKIIAHSDPQQVDNALYSPAQ MRELHVSEQARWRRLSEPQPALEIYRQFRPLNPARGHHMGMMNRGNSALAQPTVPQVIFI AFDSRELDAAQARGQRNMMIMLGAAALVIAATILAQFWFRRYRRSRQQLLEAMARKEKLV ALGHLAAGVAHEIRNPLSSIKGLAKYFAERTPPGGEAQQLAQVMAKEADRLNRVVSELLE LVRPAHLNYQPVDINALIRHSLQLVSQDAQSRGIALQFTPRPELTTINADADRLNQVLLN LYLNAMQAIGRDGVIHVSASEADRQRVKIVVTDSGKGMSDEELQAIFTPYFTTKADGTGL GLAVVQNIIEQHGGTIRAESQPGAGAIFTLWLPVEAQRREDEQR >gi|289774302|gb|GG745518.1| GENE 5 6189 - 6626 585 145 aa, chain + ## HITS:1 COG:STM4172 KEGG:ns NR:ns ## COG: STM4172 COG3678 # Protein_GI_number: 16767426 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 127 1 127 151 127 67.0 8e-30 MKRNRNLPLTLVTLAVLTFGSNAAWANHHWGNNTGMGNQGYSQLTQEQQATAQKLHNDYA AQTSALRQQLQSKRYEYNALLTAQKPDGGKIEAVAQEMEGLRQKLDQQRVKFDVALAEAG VPRGAGMGYNGCRGNGGGHRGMNHW >gi|289774302|gb|GG745518.1| GENE 6 6630 - 7331 506 233 aa, chain - ## HITS:1 COG:no KEGG:KPK_5291 NR:ns ## KEGG: KPK_5291 # Name: not_defined # Def: putative lipoprotein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 233 1 233 233 454 99.0 1e-126 MAVNSFIEGAIKPLLSVWRRPLVLAGILLLTACSHDASLPPFTASGYADNQGAMRIWRKD SGDEVHLLAAFSPWRHGDTSTSEYRWQGDQLTFIELNVYGKPPEHIRARFDAQGDLSFMQ REVDGQKQQLSSDQVALYRYRAEQIRQTSDALRQGRVVLRQGRWNAAAHTVLTCEGQTVK PDLDSRALAHIERRQSHSSAAVSIAWLEAPEGSQLLLVANENFCTWQPTEKSF >gi|289774302|gb|GG745518.1| GENE 7 7338 - 7610 334 90 aa, chain - ## HITS:1 COG:YPO3731 KEGG:ns NR:ns ## COG: YPO3731 COG0776 # Protein_GI_number: 16123868 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 91 138 96.0 3e-33 MNKTQLIDVIADKADLSKAQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG RNPQTGKEIKIAAANVPAFVSGKALKDAVK >gi|289774302|gb|GG745518.1| GENE 8 7797 - 8387 794 196 aa, chain - ## HITS:1 COG:STM4169 KEGG:ns NR:ns ## COG: STM4169 COG3068 # Protein_GI_number: 16767423 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 196 1 196 196 372 95.0 1e-103 MLQNPIHLRLEKLESWQHVTFMACLCERMYPNYAMFCKQTEFGDGQLYRRILDLIWETLT VKDAKVNFDSQLEKLEEAIPAADDFDLYGVYPAIDACVALSELIHSRLSGETLEHAIEVS KTSITSVAMLEMTEAGREMTDEELKANPAVEQEWDIQWEIFRLLADCEERDLELIKGLRA DLREAGESNIGINFQQ >gi|289774302|gb|GG745518.1| GENE 9 8430 - 9101 702 223 aa, chain - ## HITS:1 COG:STM4168 KEGG:ns NR:ns ## COG: STM4168 COG1515 # Protein_GI_number: 16767422 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Salmonella typhimurium LT2 # 1 219 1 219 223 377 84.0 1e-104 MDLAALRTQQQQLAASVERADRLDRDPPALIGGADVGFEQEGEVTRAAMVLLTWPELELV EYQVARVATTMPYIPGFLSFRETPALLAAWEQLSQKPDLLFVDGHGISHPRRLGVASHFG LMIDVPTIGVAKKRLCGKIGELGDEPGALAPLMDKNEQLAWVWRSKVRCNPLFISTGHRV GMDSALMWVERCMRGYRLPEPTRWADAVASRRPSFVRWQANHG >gi|289774302|gb|GG745518.1| GENE 10 9114 - 10178 1481 354 aa, chain - ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 699 94.0 0 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIKSKADVDKLPIPDPEQE LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHA LLEKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENEG RRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAP APRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPQHAGVFVEAVHRLSTPYHQ >gi|289774302|gb|GG745518.1| GENE 11 10219 - 10992 759 257 aa, chain - ## HITS:1 COG:yjaD KEGG:ns NR:ns ## COG: yjaD COG2816 # Protein_GI_number: 16131826 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Escherichia coli K12 # 1 257 1 257 257 481 88.0 1e-136 MDRIIEKLDRGWWVVSHEQKLWLPGGELPHGEAVNFDLVGQHALHIGEWQGESVWMVRQD RRHDMGSLRQVLDQDPGLFQLAGRGIQLAEFYRSHKFCGYCGHPMHASKSEWAMLCSHCR ERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESG IKVKNLRYVTSQPWPFPQSLMTAFMADYADGDIVVDKKELLTADWYRYDNLPLLPPPGTV ARRLIEDTVAMCRAEFE >gi|289774302|gb|GG745518.1| GENE 12 11086 - 11583 626 165 aa, chain + ## HITS:1 COG:ECs4918 KEGG:ns NR:ns ## COG: ECs4918 COG3160 # Protein_GI_number: 15834172 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Escherichia coli O157:H7 # 1 149 1 149 158 240 79.0 9e-64 MLNQLENLTERVGGSNELVDRWLQVRKHLLVAYYNLVGLKPGKESFMRLNEKALDDFCQS LVDYLSSGHFSIYERIIGEMEGDTPLLAATRLYPQLEANTQQMMDYYDTCLENAIDHDNY LEFQQALSDIGESLEARFALEDKLIALAVAHNLSNDVRDNIAPTA >gi|289774302|gb|GG745518.1| GENE 13 11848 - 13743 2366 631 aa, chain + ## HITS:1 COG:STM4164 KEGG:ns NR:ns ## COG: STM4164 COG0422 # Protein_GI_number: 16767418 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Salmonella typhimurium LT2 # 1 631 1 631 631 1216 91.0 0 MSTTKLTRREQREHAQRFIDTLAGTAFPNSRRIYVHGSQADIRVPMREIQLSPTLVGGDK DNPRYEANEPIPVYDTSGPYGDPDIGIDVRQGLAKLRQPWIDARNDCAPLSERSSAYTKA RLADDGLDELRFSGLLTPKRAVAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRSEV LRQQHAGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL EKVNGIAENLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDKAQFSELRTLGELT KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDY AAKQNIEAGMADMSHHFRARGGEIYLKQEEA >gi|289774302|gb|GG745518.1| GENE 14 13743 - 14378 821 211 aa, chain + ## HITS:1 COG:STM4163 KEGG:ns NR:ns ## COG: STM4163 COG0352 # Protein_GI_number: 16767417 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 360 88.0 1e-99 MYQPDFPPVPFRLGLYPVVDSVAWIERLLEAGVRTLQLRIKDQRDSDVENDVIAAIALGR RYHARLFINDYWQLAIKHQAYGVHLGQEDLETTDLSAIRKAGLRLGVSTHDDMEIDVALA ARPSYIALGHVFPTQTKQMPSAPQGLDQLARHIQRLADYPTVAIGGISLEKAPGVLATGV GSIAVVSAITQAADWRAATDQLLALAGAGDE >gi|289774302|gb|GG745518.1| GENE 15 14371 - 15126 826 251 aa, chain + ## HITS:1 COG:STM4162 KEGG:ns NR:ns ## COG: STM4162 COG0476 # Protein_GI_number: 16767416 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Salmonella typhimurium LT2 # 1 251 1 251 252 402 78.0 1e-112 MNDHDFMRYSRQLLLEDIAIEGQQKLLASRVLIIGLGGLGSPAALYLAGAGVGTLTLADD DAVHLSNLQRQILFTSEDIDRPKAAAAKTRLSQLNPQIKLVALQQRLSGEALRAEVAKAD VVLDCTDNMVTRQAINAACVALDTPLVTASAVGFGGQLMVLTPPWAQGCYRCLWPDSDEP QRNCRTAGIVGPVVGMMGTLQALEAIKLLSGMTTPRNTLRLFDARTSNWRNLALQRSRNC PVCGGRHADLV >gi|289774302|gb|GG745518.1| GENE 16 15110 - 15310 157 66 aa, chain + ## HITS:1 COG:STM4161 KEGG:ns NR:ns ## COG: STM4161 COG2104 # Protein_GI_number: 16767415 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Salmonella typhimurium LT2 # 1 66 1 66 66 84 68.0 5e-17 MQIWFNDEPLACADNLSVSALLTQLEQLQPGVALALNQHILPRDRWEDHLLQEGDRILLF QVIAGG >gi|289774302|gb|GG745518.1| GENE 17 15312 - 16082 949 256 aa, chain + ## HITS:1 COG:thiG KEGG:ns NR:ns ## COG: thiG COG2022 # Protein_GI_number: 16131821 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Escherichia coli K12 # 1 256 26 281 281 422 89.0 1e-118 MLRIADKTFESHLFTGTGKFAAPEVMVEAIRASGSQLVTLAMKRVDLRQHNDAILAPLLA AGVSLLPNTSGAKTAEEAVFAARLAREALGTHWLKLEIHPDARWLLPDPIETLKAAELLV REGFVVLPYCGADPVLCKRLEEAGCAAVMPLGAPIGSNQGLETRAMLEIIIEQATVPVVV DAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVTMARAFRMAVDAGLLARQAGPGARST QAQATSPLTGFLEALA >gi|289774302|gb|GG745518.1| GENE 18 16079 - 17212 1437 377 aa, chain + ## HITS:1 COG:STM4159 KEGG:ns NR:ns ## COG: STM4159 COG1060 # Protein_GI_number: 16767413 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Salmonella typhimurium LT2 # 1 376 1 376 377 694 86.0 0 MKTFSDRWRELEWDDIRLRINSKTAADVERALAAKQLTRDDMMALLSPAAANYLEPLAQR AQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDAAEIARECAAIRDL GFEHLLLVTGEHQGKVGMDYFRQHLPAIRSQFASLHMEVQPLATEEYAELKTLGLDGVMV YQETYHESMYAQHHLKGKKQDFFWRLDTPDRLGEAGIDKIGLGALIGLSDSWRVDCFMAA EHLLWLQQRYWRSRYSVSFPRLRPCAGGIEPASLMDERQLVQTICAFRLLAPEVELSLST RESPWFRDRVIPLAINNVSAFSKTQPGGYADDHPELEQFAPHDDRRPEEVASALAARGLQ PVWKDWDSWLGRASQSS >gi|289774302|gb|GG745518.1| GENE 19 17603 - 19060 1724 485 aa, chain + ## HITS:1 COG:VCA0956 KEGG:ns NR:ns ## COG: VCA0956 COG2199 # Protein_GI_number: 15601709 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Vibrio cholerae # 329 483 178 337 339 107 38.0 4e-23 MLIATFVTLAQRKDFLEDYHDINRNFTHNLAINYTETLLRENDFILGRAATFFARNDELN RAVNVDPEKGLTTLMQLQNMMPSVSSISLADTEGHYLRAPEVLKNEDSLAFAPKTRPWFI KQAEASTFSHYTSPYMDFFTHHPTITIFKPIITPEGKLKGSLAFHLDLTSMGFALRQMVA PVQGEFFVVQRDGKVVLHSDPGALFKPFVSDELMDKMTSGEGQLYDVRSDTWYYYYSFTN PDWFVIYRVDNATLINLTRHETNLVIGGFSLAAIIILLFGLYLRHASRTVLMNIINAIKT GDVKRAPRLEAMLSKAIETNKQRELTYVRQATIDALTGCKNRRAFDSDIAALMNDHQPFA LALVDIDNFKSINDTWGHLNGDIVLRNVAREGLQVLQPLEISLYRYGGEEFAVVFPAEHI DNARTLLETWRVNVERRTWREDGLTVTFSAGLGEWNMEPLDKLVVSVDEALYKAKQQGKN RILRA >gi|289774302|gb|GG745518.1| GENE 20 19232 - 19537 397 101 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 95 51.0 2e-20 MKNIVLCCAAGMSTSMLVQRMQDAAQKKGVEVSIKAVPVAEFKDNLAAADIILLGPQVKY EQAKLQALADPFGKKVAVIDMMDYGMMKGDAVLDKALKMLE >gi|289774302|gb|GG745518.1| GENE 21 19541 - 19858 396 105 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 4 101 17 114 115 87 51.0 4e-18 MEDLETIIMELLVNAGSARSAALTALQLARKGDFAAAEQAMAESHEFVKHAHKIQTQLIG LDEGTGKLPVNLITVHSQDHLMNAMVIQDLATDMIELYRRLPLAQ >gi|289774302|gb|GG745518.1| GENE 22 19902 - 21242 1573 446 aa, chain - ## HITS:1 COG:STM4301 KEGG:ns NR:ns ## COG: STM4301 COG2704 # Protein_GI_number: 16767551 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 1 446 1 446 446 701 94.0 0 MEFAIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVA ASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDV AIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNFTFNGKHLEFLDLLAITIP STLLGILAIGIFSWFRGKDLDKDEAFQAFIAVPENRHYVYGDTATLLDKKLPTSNWIAMW IFLASIAVVALLGAFSELRPAFDGKPLSMVLVIQMFMLLSGALIIIITKTNPASISKNEV FRSGMIAIVAVYGIAWMAETMFGAHMTEIKGVLGEMVKEYPWAYAIVLLLVSKFVNSQAA ALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHS FILPGLIGVGVSCVFGWVFAAMYGFL >gi|289774302|gb|GG745518.1| GENE 23 21643 - 25866 4503 1407 aa, chain - ## HITS:1 COG:STM4154 KEGG:ns NR:ns ## COG: STM4154 COG0086 # Protein_GI_number: 16767408 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Salmonella typhimurium LT2 # 1 1407 1 1407 1407 2735 97.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM GAEAIQALLRNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYG RDLARGHLINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANW DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTSGGKDLRPALKI VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPR VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVAATYSRDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQPA APQVSVEEASANLAELLNAGLGGSDND >gi|289774302|gb|GG745518.1| GENE 24 25943 - 29971 4063 1342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1569 57 0.0 MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVASKD YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT DEIHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL SEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|289774302|gb|GG745518.1| GENE 25 30296 - 30661 562 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972844|ref|YP_001337990.1| 50S ribosomal protein L7/L12 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 121 1 121 121 221 100 7e-57 MSITKDQIIEAVSAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISKDDAEALKKSLEEAGAEVEV K >gi|289774302|gb|GG745518.1| GENE 26 30728 - 31225 797 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762302|ref|NP_457919.1| 50S ribosomal protein L10 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 165 1 165 165 311 100 4e-84 MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLL RRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPA SQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA >gi|289774302|gb|GG745518.1| GENE 27 31639 - 32343 1149 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206575922|ref|YP_002241079.1| ribosomal protein L1 [Klebsiella pneumoniae 342] # 1 234 1 234 234 447 100 1e-125 MAKLTKRMSVIRDKVDATKQYDINEAISLLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFAQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF DADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLNASAN >gi|289774302|gb|GG745518.1| GENE 28 32347 - 32775 705 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206577888|ref|YP_002241080.1| ribosomal protein L11 [Klebsiella pneumoniae 342] # 1 142 1 142 142 276 100 2e-73 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTESMEKGLPIPVVIT VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA DIEAMTRSIEGTARSMGLVVED >gi|289774302|gb|GG745518.1| GENE 29 32932 - 33477 554 181 aa, chain - ## HITS:1 COG:STM4148 KEGG:ns NR:ns ## COG: STM4148 COG0250 # Protein_GI_number: 16767402 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 345 99.0 3e-95 MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFGQVEK A >gi|289774302|gb|GG745518.1| GENE 30 33479 - 33862 425 127 aa, chain - ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 179 95.0 7e-46 MSANTEAQGSGRGLEAMKWIIVAVLLIVAIVGNFLYRDIMLAVRALAVVILIAAAGGVAL LTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|289774302|gb|GG745518.1| GENE 31 34814 - 34909 81 31 aa, chain - ## HITS:1 COG:VC0321 KEGG:ns NR:ns ## COG: VC0321 COG0050 # Protein_GI_number: 15640348 # Func_class: J Translation, ribosomal structure and biogenesis # Function: GTPases - translation elongation factors # Organism: Vibrio cholerae # 1 31 1 31 394 63 96.0 6e-11 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAS >gi|289774302|gb|GG745518.1| GENE 32 35909 - 36835 924 308 aa, chain + ## HITS:1 COG:STM4139 KEGG:ns NR:ns ## COG: STM4139 COG1072 # Protein_GI_number: 16767398 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Salmonella typhimurium LT2 # 1 308 9 316 316 586 93.0 1e-167 MTPYLQFNRHQWAALRDSVPMTLTEDEITRLKGINEDLSLEEVAEIYLPLSRLLNFYISS NLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRHVELITTDG FLHPNSVLKERGLMKKKGFPQSYDMHRLVKFVSDLKSGVPQATAPVYSHLIYDVIPDGDK TVAQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEELLKSWYINRFLKFR EGAFTDPDSYFHNYAKLSKEEAVDIATSLWNEINLMNLKENILPTRERASLIMTKSANHS VNQVRLRK >gi|289774302|gb|GG745518.1| GENE 33 36862 - 37824 662 320 aa, chain - ## HITS:1 COG:ECs4900_2 KEGG:ns NR:ns ## COG: ECs4900_2 COG0340 # Protein_GI_number: 15834154 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Escherichia coli O157:H7 # 79 320 3 244 245 416 86.0 1e-116 MKDHTIPLTLISILADGEFHSGEQLGEQLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL PEPIHLLDEKKISQQIEHGRVTVLPVIDSTNQYLLDRLDELTSGDACVAEYQQAGRGRRG RKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVIAEVLQQLGADQVRVKWPNDIYLQ DRKLSGILVELTGKTGDAAQIVSGAGINLVMRRVESDVVNQGWISLQEAGVVIDRNLLAA RLIKELRLGLELFEQEGLAPYLPRWEKLDNFIHRPVKLIIGDKEIYGISRGIDAQGALLL EQDGVIKAWVGGEISLRSAE >gi|289774302|gb|GG745518.1| GENE 34 37821 - 38849 613 342 aa, chain - ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 579 78.0 1e-165 MNHSLKPWNTFGIERSARTIVRAETEQQLLSAWQTAVAAGEPTLILGEGSNVLFLNDYAG TVILNRIMGIEVSETPEAWCLHVGAGENWHQLVQFTLQHAMPGLENLALIPGCAGSSPIQ NIGAYGVELQRVCNYVDCIELETGRKQRLSAAECRFGYRDSIFKHEYQDRYAIVAIGLTL AKAWQPVLSYGDLTRLDPQTVTPQQVFDSVCHMRMTKLPDPKINGNAGSFFKNPIVSAQV AEALLAQFPQAPHYPQANGTVKLAAGWLIDQCQLKGQRIGGAAVHRQQALVLINEDRATS EDVVKLAHYVRQQVGKKFDVWLQPEVRFIGTHGEVNAEESIA Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:19 2011 Seq name: gi|289774301|gb|GG745519.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.12, whole genome shotgun sequence Length of sequence - 5659 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 155 - 600 99.0 # X87276 [D:1..1534] # 16S ribosomal RNA # Klebsiella pneumoniae # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. + SSU_RRNA 1004 - 2068 99.0 # X87276 [D:1..1534] # 16S ribosomal RNA # Klebsiella pneumoniae # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. + LSU_RRNA 3416 - 5659 99.0 # AP006725 [D:17959..20860] # 23S ribosomal RNA # Klebsiella pneumoniae NTUH-K2044 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:20 2011 Seq name: gi|289774298|gb|GG745520.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.13, whole genome shotgun sequence Length of sequence - 2500 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 11/0.000 - CDS 2 - 1286 1529 ## COG1109 Phosphomannomutase 2 1 Op 2 . - CDS 1310 - 2500 1627 ## COG0836 Mannose-1-phosphate guanylyltransferase Predicted protein(s) >gi|289774298|gb|GG745520.1| GENE 1 2 - 1286 1529 428 aa, chain - ## HITS:1 COG:YPO3097 KEGG:ns NR:ns ## COG: YPO3097 COG1109 # Protein_GI_number: 16123271 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Yersinia pestis # 1 428 1 427 457 706 75.0 0 MTQLTCFKAYDIRGELGEELNEDIAYRIGRAYGEFLKPGKIVVGGDVRLTSESLKLALAR GLMDAGTDVLDIGLSGTEEIYFATFHLGVDGGIEVTASHNPMNYNGMKLVRENAKPISGD TGLRDIQRLAEENQFPPVDPARRGTLRQISVLKEYVDHLMGYVDLANFTRPLKLVVNSGN GAAGHVIDEVEKRFAAAGAPVTFIKVHHQPDGHFPNGIPNPLLPECRQDTADAVRAHQAD MGIAFDGDFDRCFLFDDEASFIEGYYIVGLLAEAFLQKQPGAKIIHDPRLTWNTVDIVTR SGGQPVMSKTGHAFIKERMRQEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELLCLKN SSLKSLVADRQAAFPASGEINRKLGNAAEAIARIRAQYEPAAAHIDTTDGISIEYPEWRF NLRTSNTE >gi|289774298|gb|GG745520.1| GENE 2 1310 - 2500 1627 396 aa, chain - ## HITS:1 COG:YPO3099_1 KEGG:ns NR:ns ## COG: YPO3099_1 COG0836 # Protein_GI_number: 16123273 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Yersinia pestis # 3 280 80 354 354 338 58.0 9e-93 DNIILEPVGRNTAPAIALAALQATRHGDDPLMLVLAADHIINNQPVFHDAIRVAEQYADE GHLVTFGIVPNAPETGYGYIQRGVALTDSAHTPYQVARFVEKPDRERAEAYLASGEYYWN SGMFMFRAKKYLSELAKFRPDILEACQAAVNAADNGSDFISIPHDIFCECPDESVDYAVM EKTADAVVVGLDADWSDVGSWSALWEVSPKDEQGNVLSGDAWVHNSENCYINSDEKLVAA IGVENLVIVSTKDAVLVMNRERSQDVKKAVEFLKQNQRSEYKRHREIYRPWGRCDVVVQT PRFNVNRITVKPGGAFSMQMHHHRAEHWVILAGTGQVTVNGKQFLLTENQSTFIPIGAEH SLENPGRIPLEVLEIQSGSYLGEDDIIRIKDQYGRC Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:21 2011 Seq name: gi|289774295|gb|GG745521.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.14, whole genome shotgun sequence Length of sequence - 1416 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 3 - 900 990 ## COG4135 ABC-type uncharacterized transport system, permease component 2 1 Op 2 . - CDS 873 - 1415 645 ## COG4134 ABC-type uncharacterized transport system, periplasmic component Predicted protein(s) >gi|289774295|gb|GG745521.1| GENE 1 3 - 900 990 299 aa, chain - ## HITS:1 COG:ECs2461 KEGG:ns NR:ns ## COG: ECs2461 COG4135 # Protein_GI_number: 15831715 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 17 296 2 281 496 246 58.0 5e-65 MAAPLRYPLILLAWGTMAAIYLPLLPAAGELVGAARSPAHWRALFADPQLGQALAATLVS TLLSVGGALLIALTVVAALWPSLRWRRLASRLPLLLAVPHLALATAALLLFAEGGWIWQW LPLLTPPVDRYGIGLGLTMALKESAFVLWVIYGLLGEKRLADQATALKSLGYGRWQCLRW LVLPALLPALGMVLLAATAWSLSAVDVALVLGPGNPPTLAVLAWQWLSQGDDLQQAKGAL ASLLLMTILGGLALVAWGGWRIQRQYQPNLRGIRHPHPHALPGRLLAALLPLSGLLGAL >gi|289774295|gb|GG745521.1| GENE 2 873 - 1415 645 180 aa, chain - ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 1 180 210 389 389 249 77.0 1e-66 AALRQPPQTATFAAVTAPLWRYLDALHPALWRAGKDFPASPARMDTMLNNGTLRLSLTFN PLHARQKAASGELPTDSYSFGFTAGTLGNVHFVTIPANARAVAGAKVVANFLLSPEAQLR KADAAVWGDPSVLDPQRLPDGQRQALAATVPQDLPPVLAEPHAAWVDALEQEWLRRYGTH Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:21 2011 Seq name: gi|289774293|gb|GG745522.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.15, whole genome shotgun sequence Length of sequence - 1129 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 450 636 ## Kvar_0042 porin LamB type 2 1 Op 2 . + CDS 471 - 1128 992 ## KP1_0670 hypothetical protein Predicted protein(s) >gi|289774293|gb|GG745522.1| GENE 1 1 - 450 636 149 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0042 NR:ns ## KEGG: Kvar_0042 # Name: not_defined # Def: porin LamB type # Organism: K.variicola # Pathway: not_defined # 1 149 70 218 459 295 98.0 3e-79 ASPDMAIPFGLKFSGYARYGAHFQTGDQKYVGVDGSYNGASAIGRLGNESNGGEFQISKA FKSAQGAIWDLNVMFDHWSDEVNLKKAYVGVTNVLESNPNAYIWAGRDFHQRPQQGINDY FWMNHDGQGAGVKNFDIGGVQFDVATVRR >gi|289774293|gb|GG745522.1| GENE 2 471 - 1128 992 219 aa, chain + ## HITS:1 COG:no KEGG:KP1_0670 NR:ns ## KEGG: KP1_0670 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 219 228 446 460 433 100.0 1e-120 MADETNPSRITCTGSSDTGDNGHYALTTKTHNIKAGPIDVEVYANYGFDSKAVDSDARLE AWQGGLVLSHTNDSGVNKVILRYSDNSDNSVYNKTDDLTTVYASFEGSHKFTQQAQIEYL LAFHDYDNGKDNTDNRKNYGAIVRPMYFWNDVHSTWLEAGYQRVDYDQGGDNHGWKLTLS QNIAIGMGPEFRPMLRFYVTGGQVDNEHTAKVNGTQDQQ Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:30 2011 Seq name: gi|289774291|gb|GG745523.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.16, whole genome shotgun sequence Length of sequence - 1125 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 10 - 219 257 ## COG4136 ABC-type uncharacterized transport system, ATPase component 2 1 Op 2 . + CDS 313 - 1123 1096 ## COG2897 Rhodanese-related sulfurtransferase Predicted protein(s) >gi|289774291|gb|GG745523.1| GENE 1 10 - 219 257 69 aa, chain + ## HITS:1 COG:ECs2462 KEGG:ns NR:ns ## COG: ECs2462 COG4136 # Protein_GI_number: 15831716 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 68 142 209 217 80 58.0 6e-16 MSLLRALLARPEALLLDEPFSRLDATLRAAFRRWVFEELARQAIPAILVTHDREDGPPAG RCLAMETWQ >gi|289774291|gb|GG745523.1| GENE 2 313 - 1123 1096 270 aa, chain + ## HITS:1 COG:ECs2463 KEGG:ns NR:ns ## COG: ECs2463 COG2897 # Protein_GI_number: 15831717 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 270 6 275 440 410 78.0 1e-114 MKRVSQLTALALLMGLAASTTCAAETMPALTLSHLQQQHGVAIDTRLSAYYNGWPQRANG PEGHEPQALNLSARWLGAMSDDQLRAWAKQHQIQPDTPVALYGNPEDNASVAARLKQAGF TRLSTLSDALSQTDRLQKLPHFEQLVYPQWLHDLQQGKRVAAAPTGDWKVFEAAWGAPKL YLLSHIPGAGYIDTNEVESEPLWNKVSDAQLKAMLAKHGIRHDTTVILYGRDVYAAARVA QIMLYAGVKDVRLLDGGWQTWSDAGLPVER Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:31 2011 Seq name: gi|289774288|gb|GG745524.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.17, whole genome shotgun sequence Length of sequence - 909 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 + CDS 2 - 544 627 ## COG4135 ABC-type uncharacterized transport system, permease component 2 1 Op 2 . + CDS 544 - 907 381 ## COG4136 ABC-type uncharacterized transport system, ATPase component Predicted protein(s) >gi|289774288|gb|GG745524.1| GENE 1 2 - 544 627 180 aa, chain + ## HITS:1 COG:ynjC KEGG:ns NR:ns ## COG: ynjC COG4135 # Protein_GI_number: 16129709 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli K12 # 9 180 325 496 496 158 63.0 4e-39 VCLLWLACGPTRGDGWVWLPLVLPALPLAAGQYQLALYAWLDGEWWTVLWGHLLWVVPWM LFILRPAWRQRDPRMAVIARTLGWGPTRIFWLLTLPSLTRPLLTALAVGFSVSIAQYLPT LWLGAGRIPTLTSQAVALSSGGEVQTLAAQALWQLLLPAVCFTLTALLAWLAGRYRRGLR >gi|289774288|gb|GG745524.1| GENE 2 544 - 907 381 121 aa, chain + ## HITS:1 COG:ECs2462 KEGG:ns NR:ns ## COG: ECs2462 COG4136 # Protein_GI_number: 15831716 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 121 1 121 217 148 61.0 2e-36 MLTVNHLTLSVKRQPLLREVAFSVAPGEVLTLMGPSGSGKSTLFAWMIGALAGDFRAEGE LWLNGRRCDTLPTEHRRIGILFQDPLLFDHFSVGQNLQLALPESVRGEARKAAVEQALSR A Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:31 2011 Seq name: gi|289774286|gb|GG745525.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.18, whole genome shotgun sequence Length of sequence - 588 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 587 744 ## COG1070 Sugar (pentulose and hexulose) kinases Predicted protein(s) >gi|289774286|gb|GG745525.1| GENE 1 2 - 587 744 195 aa, chain - ## HITS:1 COG:TM0116 KEGG:ns NR:ns ## COG: TM0116 COG1070 # Protein_GI_number: 15642891 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 2 189 228 419 492 109 33.0 4e-24 TGLPAATPVAAGALDVCSAALGCGAVNEGDIYTILGTTCCTGIVCRGPQTVNEATRFVTH TEAGQVISLFPMQAGTPNIDWLQQHISLDADLDRLEQAIAEVEPGSGGVFWQPYLNGERA PFYSPDARAGFFGISPHTTRAELQRAVFEGLAFAIVDALQGYPQGGELYLTGGGAASATW LQIIADCTGRTVVSS Prediction of potential genes in microbial genomes Time: Mon Jul 11 06:16:32 2011 Seq name: gi|289774284|gb|GG745526.1| Klebsiella sp. 1_1_55 genomic scaffold supercont1.19, whole genome shotgun sequence Length of sequence - 561 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 541 99.0 # AP006725 [D:17959..20860] # 23S ribosomal RNA # Klebsiella pneumoniae NTUH-K2044 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.