Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:18:26 2011 Seq name: gi|290782267|gb|ADGP01000001.1| Megasphaera genomosp. type_1 str. 28L contig00067, whole genome shotgun sequence Length of sequence - 987 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 985 1399 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|290782267|gb|ADGP01000001.1| GENE 1 1 - 985 1399 328 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 22 311 1836 2064 2712 63 31.0 6e-10 KKLNETITISGGVTEESKLTDKNIGVVVKDGKLNVKLVKNLTGLESATFTKDGRTSTLNQ DGLTIGNNTDSTKNVSLTKDGLIMGGQEITNVKESKTDTSAATVGQVKAVKTATEQVASD LAAHKKVAVTYDDEQKKQITLGGGTEGTTITNVKAGALSKTSTDAVNGSQLFATNTNVTA NTTNINNITKTLSSGFKVKAGNTAETVGLDNKNPETVEFKAVSENNSLTVGITKDDTTHT KIITYTLADNLTFGKAGEKGKDGTIGVNGKDGSSVVINGKDGSIGLNGTNGQNGLSIRGE KGTEGKPSVDGTTTIKRIVITDPDGKNP Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:18:28 2011 Seq name: gi|290782266|gb|ADGP01000002.1| Megasphaera genomosp. type_1 str. 28L contig00066, whole genome shotgun sequence Length of sequence - 3098 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 163 - 718 92.0 # X68423 [D:1..2924] # 23S ribosomal RNA # Pectinatus frisingensis # Bacteria; Firmicutes; Clostridia; Clostridiales; Veillonellaceae; Pectinatus. - LSU_RRNA 861 - 1352 91.0 # X68423 [D:1..2924] # 23S ribosomal RNA # Pectinatus frisingensis # Bacteria; Firmicutes; Clostridia; Clostridiales; Veillonellaceae; Pectinatus. 1 1 Tu 1 . + CDS 1583 - 1816 77 ## Predicted protein(s) >gi|290782266|gb|ADGP01000002.1| GENE 1 1583 - 1816 77 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLRLGLGPDLPRVDDRCPGTLRLSVEWILTILFATHTGILSSCLSTCPSGQASPMQERS PTQLALLIAKASVPYSS Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:18:48 2011 Seq name: gi|290782213|gb|ADGP01000003.1| Megasphaera genomosp. type_1 str. 28L contig00038, whole genome shotgun sequence Length of sequence - 43346 bp Number of predicted genes - 51, with homology - 49 Number of transcription units - 14, operones - 11 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 20 - 625 762 ## COG2206 HD-GYP domain 2 1 Op 2 . - CDS 654 - 1148 424 ## Vpar_1025 S-adenosylmethionine decarboxylase related protein - Prom 1245 - 1304 10.4 + Prom 1453 - 1512 7.0 3 2 Tu 1 . + CDS 1597 - 1986 579 ## COG1396 Predicted transcriptional regulators + Term 2080 - 2116 5.1 - TRNA 2115 - 2189 82.8 # Arg CCG 0 0 + Prom 2206 - 2265 9.5 4 3 Tu 1 . + CDS 2389 - 3144 919 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Prom 3166 - 3225 5.7 5 4 Op 1 33/0.000 + CDS 3451 - 4437 629 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 6 4 Op 2 35/0.000 + CDS 4424 - 5434 1153 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 7 4 Op 3 . + CDS 5437 - 6228 219 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 8 4 Op 4 12/0.000 + CDS 6320 - 7120 864 ## COG2875 Precorrin-4 methylase 9 4 Op 5 6/0.000 + CDS 7113 - 8180 866 ## COG2073 Cobalamin biosynthesis protein CbiG 10 4 Op 6 4/0.000 + CDS 8177 - 8923 733 ## COG1010 Precorrin-3B methylase 11 4 Op 7 . + CDS 8920 - 9687 646 ## COG2099 Precorrin-6x reductase 12 4 Op 8 . + CDS 9684 - 10904 1019 ## COG2242 Precorrin-6B methylase 2 13 4 Op 9 1/0.000 + CDS 10891 - 12276 891 ## COG1797 Cobyrinic acid a,c-diamide synthase 14 4 Op 10 . + CDS 12276 - 12908 772 ## COG2082 Precorrin isomerase 15 4 Op 11 8/0.000 + CDS 12984 - 13310 467 ## COG2739 Uncharacterized protein conserved in bacteria 16 4 Op 12 23/0.000 + CDS 13321 - 14676 1529 ## COG0541 Signal recognition particle GTPase 17 4 Op 13 19/0.000 + CDS 14713 - 14982 254 ## PROTEIN SUPPORTED gi|227372778|ref|ZP_03856257.1| SSU ribosomal protein S16P 18 4 Op 14 . + CDS 14996 - 15223 315 ## COG1837 Predicted RNA-binding protein (contains KH domain) 19 4 Op 15 . + CDS 15232 - 15639 622 ## Vpar_0579 hypothetical protein 20 4 Op 16 30/0.000 + CDS 15611 - 16147 202 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 21 4 Op 17 2/0.000 + CDS 16144 - 16875 580 ## COG0336 tRNA-(guanine-N1)-methyltransferase 22 4 Op 18 . + CDS 16878 - 17450 477 ## COG4752 Uncharacterized protein conserved in bacteria 23 4 Op 19 . + CDS 17465 - 18190 914 ## COG0217 Uncharacterized conserved protein + Term 18203 - 18244 8.2 - Term 18617 - 18680 8.6 24 5 Op 1 . - CDS 18687 - 19655 720 ## EUBELI_20463 hypothetical protein - Prom 19685 - 19744 6.5 25 5 Op 2 . - CDS 19779 - 20357 414 ## COG4720 Predicted membrane protein - Prom 20575 - 20634 8.2 + Prom 20515 - 20574 6.4 26 6 Tu 1 . + CDS 20604 - 22136 1557 ## COG0248 Exopolyphosphatase + Term 22155 - 22209 19.0 - Term 22142 - 22196 19.0 27 7 Op 1 . - CDS 22243 - 22518 425 ## Ethha_0921 GCN5-related N-acetyltransferase 28 7 Op 2 . - CDS 22543 - 23175 653 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 29 7 Op 3 . - CDS 23220 - 23996 725 ## COG1586 S-adenosylmethionine decarboxylase - Term 24145 - 24180 1.2 30 8 Op 1 . - CDS 24195 - 24782 458 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 31 8 Op 2 . - CDS 24793 - 25449 683 ## Vpar_0432 protein of unknown function DUF129 32 8 Op 3 . - CDS 25464 - 26006 647 ## Vpar_0431 hypothetical protein 33 8 Op 4 . - CDS 26045 - 26848 820 ## COG0796 Glutamate racemase 34 8 Op 5 . - CDS 26861 - 27277 477 ## COG0824 Predicted thioesterase - Prom 27306 - 27365 12.9 35 9 Op 1 . + CDS 27577 - 28452 1144 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 36 9 Op 2 . + CDS 28418 - 28564 64 ## + Term 28578 - 28620 -0.7 - Term 28447 - 28505 15.1 37 10 Op 1 21/0.000 - CDS 28589 - 29578 1272 ## COG0306 Phosphate/sulphate permeases 38 10 Op 2 . - CDS 29571 - 30200 884 ## COG1392 Phosphate transport regulator (distant homolog of PhoU) - Prom 30263 - 30322 8.0 - Term 30418 - 30453 5.1 39 11 Op 1 17/0.000 - CDS 30461 - 31747 1477 ## COG0151 Phosphoribosylamine-glycine ligase 40 11 Op 2 10/0.000 - CDS 31744 - 32349 784 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 41 11 Op 3 21/0.000 - CDS 32349 - 32975 738 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 42 11 Op 4 13/0.000 - CDS 32968 - 34035 874 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 43 11 Op 5 . - CDS 34013 - 35440 1546 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 44 11 Op 6 . - CDS 35465 - 35860 435 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 45 11 Op 7 . - CDS 35830 - 35958 96 ## - Prom 36042 - 36101 3.3 - Term 35968 - 36020 14.1 46 12 Op 1 13/0.000 - CDS 36167 - 37081 1099 ## COG0167 Dihydroorotate dehydrogenase 47 12 Op 2 . - CDS 37078 - 37839 710 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Prom 37870 - 37929 11.2 - TRNA 37971 - 38045 86.6 # Met CAT 0 0 - Term 37922 - 37957 7.1 48 13 Op 1 31/0.000 - CDS 38109 - 39380 1820 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 49 13 Op 2 . - CDS 39386 - 41197 1757 ## COG0358 DNA primase (bacterial type) - Prom 41355 - 41414 7.9 + Prom 41314 - 41373 9.1 50 14 Op 1 . + CDS 41399 - 42304 237 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 51 14 Op 2 . + CDS 42317 - 43282 1261 ## COG0191 Fructose/tagatose bisphosphate aldolase Predicted protein(s) >gi|290782213|gb|ADGP01000003.1| GENE 1 20 - 625 762 201 aa, chain - ## HITS:1 COG:CAC3410 KEGG:ns NR:ns ## COG: CAC3410 COG2206 # Protein_GI_number: 15896651 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Clostridium acetobutylicum # 3 199 51 249 265 115 34.0 6e-26 MYMVSLLHTAGIDKEELNSLDTITAELLKFLQFKNRRLYMHSLQVANYSISISAKLALPK SECEQIKYAALLHDIGLLFLSNQLLNKRPYLNRTEKAMYRRHAAAGGNVLENIPCCQDII PYISAHHERWDGSGFPRHLRGTNIPLGARIIAVADYYDTTINPSTEYWAKTKQQAVNELF SASGLLFDPEIVKAFIETLGN >gi|290782213|gb|ADGP01000003.1| GENE 2 654 - 1148 424 164 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1025 NR:ns ## KEGG: Vpar_1025 # Name: not_defined # Def: S-adenosylmethionine decarboxylase related protein # Organism: V.parvula # Pathway: Cysteine and methionine metabolism [PATH:vpr00270]; Arginine and proline metabolism [PATH:vpr00330]; Metabolic pathways [PATH:vpr01100] # 1 152 1 160 168 107 36.0 2e-22 MKNTLGNHLLIDFYNCQASFACPEALHPLIEAAFSAVDLPLYSWQDYHCDGEFICSAITD HGHITIHYYDVLAYAAVDIYIFNSNRSLNRMMGALKRLFQSDRIKATAVRRGDFGVIRDM KPKKKTKLTTIRRVKTTGAKIRKTSVSMFHILRHPQRNQRRYKH >gi|290782213|gb|ADGP01000003.1| GENE 3 1597 - 1986 579 129 aa, chain + ## HITS:1 COG:FN2065 KEGG:ns NR:ns ## COG: FN2065 COG1396 # Protein_GI_number: 19705355 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 7 74 8 75 155 57 36.0 5e-09 MREFTTADRLKELLEVKRISQAGLSKIMGISRSAMCQYISGKITPKQDKLYIISTSYGVS LAWLMGYDVPMDVSLPVITYSQEEQDLIFKYRSLLPVGKETVDAVLEVQYQAYLKSKRKL HKRRVTQDA >gi|290782213|gb|ADGP01000003.1| GENE 4 2389 - 3144 919 251 aa, chain + ## HITS:1 COG:aq_1329 KEGG:ns NR:ns ## COG: aq_1329 COG0476 # Protein_GI_number: 15606532 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Aquifex aeolicus # 2 248 4 251 271 246 49.0 2e-65 MLSSKEKERYERNILVAAIGIQGQEKLLQSKVLLVGAGGLGSPVALYLTAAGVGTLGIVD EDRVDLSNLQRQILHTEKTIGKAKVESARTRLQELNSHVHLHTYYERATADSLRQMICAE NYDIILDGTDNFAAKFLINDVCVAMRKPFIHAGVLAMQGQLMTYVPGKGPCYRCFFEEEP QVGTVPTSKDVGILGAVAGTVGTLQATEAVKYLTGTGELLLGTLLVYDGVRMTFRRIPFA KNPHCTACHVS >gi|290782213|gb|ADGP01000003.1| GENE 5 3451 - 4437 629 328 aa, chain + ## HITS:1 COG:lin2525 KEGG:ns NR:ns ## COG: lin2525 COG0614 # Protein_GI_number: 16801587 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Listeria innocua # 5 319 1 318 323 121 26.0 2e-27 MKEKIKSVLWIIIGISLSLCVSGCGVSGGFVPIQNRAQKPAYAVIHDDLGRTVTLSAKPQ RVIILTTSLLSFSAAVNGPIVGRTTVRSKQIHIPSQYIQATEVGPVYAVSMEKVLALQPD LIIIGAHSQEKLLPLCEQNQIPVIALKTKTRQEATRALQIMGQIYGCPQQAAMAQTVLDK KIQQVLNKLPNRTKTAAILHVTPGAVTVELSDSIAGDMARLLRVQNVTCPTGKAGITKEK VPYSMEALLAADPDVILFTAMGSPDKIDKRLRTDLKANPSWAHLRAVRTGQVYVLPEQYF LVSPGMDYDKALRYMAKLIYGEAFDATI >gi|290782213|gb|ADGP01000003.1| GENE 6 4424 - 5434 1153 336 aa, chain + ## HITS:1 COG:BH3291 KEGG:ns NR:ns ## COG: BH3291 COG0609 # Protein_GI_number: 15615853 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus halodurans # 5 334 2 327 332 252 46.0 8e-67 MQQYNWSQTMRRKRFWPRLLPVLFGLTALVAFLQAILYGPVFFPLKKVLYILLYPETDMA SQIILNVRLPRAITGAMVGADLSLSGLILQAVLRNPLADPHLIGVSAGAGIVGMIVLIFV PQCIRLLPPLAFIGAIGTAVLIYVLAWKDGMRPVRIILAGVAVSAFLGACISGLLIFYSD RVHGALMWLIGGLGNAGWNDVTLLYPYTVAGIILTFAGSYYLNMLRLGDDMARGLGVAVE RTRLLLLAVAALLAAGAVSVGGLIGFVGLVVPHIVKLLIGEDYRFVVPASVFLGSAVMLF SDTVARLLFAPVELPVGLIMALLGAPFFLFLLRKEV >gi|290782213|gb|ADGP01000003.1| GENE 7 5437 - 6228 219 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 227 2 224 245 89 28 4e-17 MSASTLEVNHVHVFRNKKLVLQDISFTAYEGEIIAVMGPNGCGKSTLLHTLNRSLPYTSG SIQVQQIPLQRYSRKQLARQIAILPQTHMVPEAIQVRNLVRLGRFPYQRFYRGGTRKDEE WVNAALQAVQLTDKAMLPVAELSGGEQQRVWLAVLLAQEAKILLLDEPTVYLDMYHQLQL LQRLQTICTRFRLTILIVLHDINSALQYAQRILVMKAGKVVACGKPETTVTPALLASVFH IQSEVVRLKSGGQAIIPLSTDEN >gi|290782213|gb|ADGP01000003.1| GENE 8 6320 - 7120 864 266 aa, chain + ## HITS:1 COG:lin1160 KEGG:ns NR:ns ## COG: lin1160 COG2875 # Protein_GI_number: 16800229 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Listeria innocua # 12 257 4 249 249 266 52.0 3e-71 MDKRNEGTTGTVYFVGAGPGDPDLITLRGKELLTIADCIIYAGSLVNPQLLSYARPACRC YNSAALTLEEILHIMCKEAAQGHCIVRLHTGDPSLYGAIREQIAGLRQAAVPFFVIPGVS SFTAAAAAMAAEYTVPGISQSVIITRYGGRTPVPERQEIHNYATHTATMVIFLSAGHIAQ VQDELLQGGYAKDTPAAIVYKVSWADEKILSCTLGSLAATGRKANITHTALILVGHFLGA VYERSCLYNPSFTHAFRKGDKEGNHG >gi|290782213|gb|ADGP01000003.1| GENE 9 7113 - 8180 866 355 aa, chain + ## HITS:1 COG:CAC1370 KEGG:ns NR:ns ## COG: CAC1370 COG2073 # Protein_GI_number: 15894649 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Clostridium acetobutylicum # 35 342 21 322 326 155 32.0 1e-37 MDESSYIYIISVSYQGRQLSEILWTKLRSRHTYVQAYTVEAYKTDSIPALPLPLRTSLQG LWRQAKAIIFIGAVGIAVRTIAPYIQHKAKDPAILCLDEKGKFVIPLLSGHMGGANALAV QISRVLRSTPVLTTATDIHGLFAVDTWAMQQGLCLQSFTIAKKFSAYLVQRRQAGFFSEF AEMPGRPSCLMTATKESVGMAVTIHASCRPFPTTLAVYPPILHLGIGCRRGVSYEDLEAA VLDTLKKYDLAVGAIRDIRTIDIKLAEPGLCALAAARKWPLHGYSAGQLQNVEGSIASSA FVRRTVGVDNVCERAALVHLKNGILRVRKQRYKGITIAIGQENFTVSWERRDHRQ >gi|290782213|gb|ADGP01000003.1| GENE 10 8177 - 8923 733 248 aa, chain + ## HITS:1 COG:FN0951 KEGG:ns NR:ns ## COG: FN0951 COG1010 # Protein_GI_number: 19704286 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Fusobacterium nucleatum # 2 246 3 246 249 232 45.0 4e-61 MNAGVYVIGIGPGHLEGMTAEAVHILQQCTHIVGYTTYIRLLQKNFPHAVYFTTPMTREI ERCQQAVQWAREGKRVALISGGDAGLYGMAGLVYEVSAGYEEVEIHVIAGVTAAMAGAAL LGAPLVNDTCFISLSDALTPWNTIAHRLHCAASGDFVIVLYNPTSKRRRNYVQKACRIIQ AYRSPATPVGVAQYIGREGEKTRLLTLKELAQLELNMISTVFIGNSHTRIIRGHMVTSRG YAIQEKEK >gi|290782213|gb|ADGP01000003.1| GENE 11 8920 - 9687 646 255 aa, chain + ## HITS:1 COG:FN0950 KEGG:ns NR:ns ## COG: FN0950 COG2099 # Protein_GI_number: 19704285 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Fusobacterium nucleatum # 5 230 20 245 266 129 30.0 4e-30 MIRPIWIAGGTTEGRQLVAALAYTGRRILVTVATDYGAKLIKKTPSVTVLIKRLSEPDME LFLKQYRPLLVIDATHPYAQEVTANLQRACHRMSYEYLRLVRQKSNAGTYFSVTSVAEAV DVLRHTEGTVFLTTGSKDLQLFTELPRYTERIALRILPSHMSLDKALQLGFAAKQIVCMQ GPFTKDLNIATFRHYHARYIVTKDSGDPGGFMEKVAAAKAVGAALIVISRPSEEGYSYKK IVSYVQQRLQEENRP >gi|290782213|gb|ADGP01000003.1| GENE 12 9684 - 10904 1019 406 aa, chain + ## HITS:1 COG:SSO2303 KEGG:ns NR:ns ## COG: SSO2303 COG2242 # Protein_GI_number: 15899066 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Sulfolobus solfataricus # 209 396 5 196 199 127 41.0 6e-29 MKIYVIGMGPGNPDLLTGEAQHAIAHSAVIIGDARMTAMIAPQDKTIYTTIHVQEIKNYI RRVQKGPIAILVSGDVGFYSLAALLPSSPGYEVQRICGISSLVYLASKLNIPWQDIYCVS RHGRQASVSAAVHAHEKVFCLTGGTQTVATICQELCRAGLGHVQVTAGENLSYSSEKIQQ GNAAELCASPFRDPSVLLIENTVSPSKAYPFYGIPDTAFCRGRVPLTKREIRAVAMSFLM IRPGQAVYDIGCGSGSCTVEAARMTMDGTVYAIDKNPEAMALTKKNVARFSLGNVIMLQG IAPDILAQIPEPPAYAFIGGSGGNIKAILDWLYTANPMCRIVITAITLETVGAITSYYAE QPLYTLEITQLQAARSRAAGRYHIMTGENPVYIFSAVRKEAPYENL >gi|290782213|gb|ADGP01000003.1| GENE 13 10891 - 12276 891 461 aa, chain + ## HITS:1 COG:FN0972 KEGG:ns NR:ns ## COG: FN0972 COG1797 # Protein_GI_number: 19704307 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Fusobacterium nucleatum # 9 448 4 440 444 271 36.0 3e-72 MKTCNIPRLLVAGTHSGCGKTTVFCALAAGFKQRGKKVVAYKSGPDYIDPMFHERVLTTP SRNLDLFLFGRRQLGKQRASYLFTRHSRGAQLALCEGAMGYFDGVAATAEAGAFAVSEAL SFPTVLVVDGTHASLSLGAVIRGFSQLDTAGCLKGFIVNKCKPSVYSYFKETWEHMSGVK ALGFLPAIPECVLAERHLGLLTAGEVQDLQKKIAVLQNTAQQTMDWQALEEIAHNTLPVY AEDLRMPPLSSVRLAIAKDRAFCFYYADNLQLLQDLGAELYFFSPLTDTQLPPCDGIYLG GGYPELYAKELAANYPLKTALHTAIQQGTPCFAECGGFLYLLTAWHTGNNVYTWSNVLSG TATLQSHPVRFGYSLLKMCHANVWGEQGTIWPMHEFHYSDSTNNGKDCLAEKVGKSRQWR CQHATETLFAGYAHFHFWGNPQGAMKFIRTCARYRQQKEEL >gi|290782213|gb|ADGP01000003.1| GENE 14 12276 - 12908 772 210 aa, chain + ## HITS:1 COG:FN0970 KEGG:ns NR:ns ## COG: FN0970 COG2082 # Protein_GI_number: 19704305 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Fusobacterium nucleatum # 7 210 9 215 219 158 41.0 8e-39 MKDWHMLPAEIEAQSMKIIEEELGEISLPPLHKEIIKRVIHTSADFEYARTLRFSPQAVQ AGLEALQQQAVIVTDTNMGLMGINADGLRRLGCTKQCFMAAPEVKAQATANGTTRAVAAM DKAAALQGPLIFAIGNAPTALLRIQELIRQKKCRPALIIGVPVGFVNVIDAKEGLMKMPV PYIVAKGRKGGSAIAAAICNALLYMAIRKK >gi|290782213|gb|ADGP01000003.1| GENE 15 12984 - 13310 467 108 aa, chain + ## HITS:1 COG:BH2485 KEGG:ns NR:ns ## COG: BH2485 COG2739 # Protein_GI_number: 15615048 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 92 1 92 109 75 50.0 2e-14 MLDDVIRKGRLLDLYGALLTEKQRQCVHLYYNQDWSLREIGEALSVSRQGVYDMLHRSVQ ALEEYEKQLHLLAKNEKNNAVLTKLTALLAEQNPDISAIRCMVADIEI >gi|290782213|gb|ADGP01000003.1| GENE 16 13321 - 14676 1529 451 aa, chain + ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 436 1 433 451 460 58.0 1e-129 MAFESLSERFQEAFKKLRGKGKLNEEDVREALKEIRRALLEADVNFTVAKDFIKRVQEKA VGEEVFGSLNASQTVIKIVRDELTELLGGTQSRLTVSSKPPTVLMLAGLQGAGKTTTAAK LAKHLKQKGKNPLLVAADVYRPAAITQLEILGNELNIPVYKEENCQDPVGIVSRAVPYAT AHLCDTVIIDTAGRLHINEVLMDELIHIKETVHPHEILLVVDAMTGQDAVTAASAFDAAL GIDGLIMTKLDGDARGGAALSIKAVTGKPIKFIGVSEKTDGLEEFHPHRYASRILDLGDV ETIIEKAQAAFDEESLAKMKKTMRSGAYTLEDFLQQLQSLRKMGSMSSLLGLMPGIGKYK KELDKVDLDGKEFKQPEAIILSMTTAERTSPNPKLLIKDSRKRRIAKGSGTRVQDVNRLL KQFTEIQKMMKQAKKMQGNKKRHSFLPKFPF >gi|290782213|gb|ADGP01000003.1| GENE 17 14713 - 14982 254 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372778|ref|ZP_03856257.1| SSU ribosomal protein S16P [Veillonella parvula DSM 2008] # 1 89 1 87 87 102 60 4e-21 MIKIRLARLGAKKKPIYRVVVADSRNARNNGRPVATIGMYDPAKDAETRLTVDAAAALEW LGKGAQPTETIRSLFKKAGIMAQFEASKK >gi|290782213|gb|ADGP01000003.1| GENE 18 14996 - 15223 315 75 aa, chain + ## HITS:1 COG:TP0906 KEGG:ns NR:ns ## COG: TP0906 COG1837 # Protein_GI_number: 15639891 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Treponema pallidum # 2 74 6 78 80 60 47.0 9e-10 MEELITCIAKGLVTQPEAVTVTKIQKQGLEVYTLHVAPDDMGKVIGRQGKIVKAIRLVVR AAAVHTHQKVAVEIA >gi|290782213|gb|ADGP01000003.1| GENE 19 15232 - 15639 622 135 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0579 NR:ns ## KEGG: Vpar_0579 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 135 1 135 135 100 48.0 1e-20 MDQITLRVPVTVKAKVTPALKEKILKNVEQTLADIDREMQNLEDQAKRMMAEQAKIDAQG LISLRAQVEEQKQRLMAARTKGVADKEAAMQLAIGSEIVQGTTEQMVEVKIGDDLDALTG VEVLLEDGKIIAIRR >gi|290782213|gb|ADGP01000003.1| GENE 20 15611 - 16147 202 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 20 174 7 163 179 82 30 4e-15 MAKLLPFVGNVMAALELFTIGKIVAPHGVRGDVRIYPDTDFPERFLQMKYGYIAGKRYEI TAARFHKHVILMKFAGVQDRNAAEALVNHELQVPREDLMPLKPGRYYIFDLIGIPVYDLQ NTYLGILTEVLKTGSNDVYVVRTDNGEEQLFAAIPSVVKEINLDEHKIILNPPEWVDA >gi|290782213|gb|ADGP01000003.1| GENE 21 16144 - 16875 580 243 aa, chain + ## HITS:1 COG:BH2479 KEGG:ns NR:ns ## COG: BH2479 COG0336 # Protein_GI_number: 15615042 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Bacillus halodurans # 1 223 1 224 246 231 48.0 9e-61 MRIDIISLFPEFIRSFYSHSIIGRARKAGILDLDVTNPRQFTYDNHHMADDTIYGGGHGM LMKAAPLFAAVESVRREVPKRRIIFLGPAGSTFTQEKARQLATYEQLIFICGHYEGVDYR VEKYLADETVSVGDYVLTGGEIPAMIVTDAVARMLPGVLGTSAGAMDDSFYHSLLEYPQY TKPATFRQWSVPTVLTSGNHKKIAEWRRLAALHRTQKLRPDLLVKNSFAASPYIFPPKEQ KGK >gi|290782213|gb|ADGP01000003.1| GENE 22 16878 - 17450 477 190 aa, chain + ## HITS:1 COG:FN0282 KEGG:ns NR:ns ## COG: FN0282 COG4752 # Protein_GI_number: 19703627 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 185 1 185 187 189 47.0 2e-48 MKSSLYVGLVHYPVYDKNFSVITTAITNYDLHDISRAAKTYGIKKYIIIHNIPGQLDMIR KIMQFWESPVGKAYNAYRTQAFDIVDIQDSIAAAIESVTNREGLRPYVVTTDARTYANTI SYKELRKRRETDCRPILLLLGTGYGMTQEIMEAFDFILEPIRGYTTYNHLSVRSAAAIIL DRLAGAAWWE >gi|290782213|gb|ADGP01000003.1| GENE 23 17465 - 18190 914 241 aa, chain + ## HITS:1 COG:CAC2295 KEGG:ns NR:ns ## COG: CAC2295 COG0217 # Protein_GI_number: 15895562 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 241 1 242 246 248 54.0 7e-66 MSGHSKWANIKRKKGKNDAIRAKITTKIGREITIAVRMGGADPVGNMRLKLALQKAKENN IPKENIKRAIQKGAGATEGQNYEEIVYEGYGPAGVAVTVNVLTDNRNRTAADVRHVFSKY GSSMGETGCVGWMFHSKGIFIVDKAVTDEDTVMELALDAGADDVKTGDEEFEIITAPENF DSVEKALAEHNIATEHAQITMVPDNLIKLNAEDAEKMETLIDALEDLDDVQDVYHNWDCN E >gi|290782213|gb|ADGP01000003.1| GENE 24 18687 - 19655 720 322 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20463 NR:ns ## KEGG: EUBELI_20463 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 317 14 329 329 273 45.0 7e-72 MASEEQDKKTERVLSLYTRLLQGEEINKAIEAEHYGVTERSIQRDLQDIERFCDHHKKQN DKMALFYNRHTHSVHLERTSKTLSPKEILALCKILLDSKAFKKEKMTNMLQRLIENCSSD DSKNEVWHLIKNELFYYIEPKHQKDFLDILWEAGKAIRFSHYITIVYERKHHNKVVTRVL QPLSILFSEYYFYLIAFIKEDMANISSQNRKKMLPVVYRIDRISSIQVSEKRFVIPYCNH FEEGQFRRRIPFMFGGELMQVIFTYSGYDIDAVLDRLPTATIVSYREETGIYTLSAEVYG HGIDMWLRSQGPFVKVLSKQVL >gi|290782213|gb|ADGP01000003.1| GENE 25 19779 - 20357 414 192 aa, chain - ## HITS:1 COG:CAC0634 KEGG:ns NR:ns ## COG: CAC0634 COG4720 # Protein_GI_number: 15893922 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 5 131 9 137 185 65 30.0 8e-11 MNNQKMTTKMLCYTAIFTALVFLLTDIPKIPFPFGYAHLGDAMIFALPFYFPTRPAAVAA GAGSALADLLGGYPLWIVPTFLIKFCMVYAVFYVARPDKYETTFFSPRLFAGILVSAGWM IGTYALCGSLLYGSGAGTAMLPGLLGKGGINFIVAYGFISIIKNISFLQAKRPTGKNKVY RSDGTMTDTDNE >gi|290782213|gb|ADGP01000003.1| GENE 26 20604 - 22136 1557 510 aa, chain + ## HITS:1 COG:CAC0621 KEGG:ns NR:ns ## COG: CAC0621 COG0248 # Protein_GI_number: 15893909 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Clostridium acetobutylicum # 1 508 1 499 499 273 31.0 8e-73 MEKIAIIDMGSNSIRFLVLEIADNRSYTLLYQEKETIRLGVGLAQSGYISADGIKRALNS LKMYRHIMSVMGVNKCLAVATAAVRSAKNGREFLETIKQETHIHMEVITGEREAYLGYLG VINTIRERDFLLFDLGGASIEMTLVRQGKPEKSISLPMGAVTLTERFQLQNTVHMDTLQA CQKYIRKKLLTVPWLHNINIPLIGIGGTARTFAKMDQKATNYEFSKIHNYQLSLSRFTDI YEQVTTRTHANRKKIPGLSGDRVDIIVAGATVLKEVFALTASKEMIIGGCGLREGLFYEY YAQYFQLPSPQIENILEFSITNFIGTLGSAVHRIHCKQVTRLTLQLFDQLQPLHRYGRRA RTLLMTAARLHDVGKTINFYNHARHSAFMIGHAPLYGLTHREQLIAGFIAGFHHGISRKT LIAYRYAQMADADDWIMIRKLSTLLALADASDLTYEQVVQDFSITIQDDIVVLVITSAPD SVHEAADYAMKQYIKQFKKEFHMSLVLIWK >gi|290782213|gb|ADGP01000003.1| GENE 27 22243 - 22518 425 91 aa, chain - ## HITS:1 COG:no KEGG:Ethha_0921 NR:ns ## KEGG: Ethha_0921 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: E.harbinense # Pathway: not_defined # 10 84 10 84 94 81 48.0 9e-15 MKFCYASQSISLQDETGAVKARIDFPIAEDGTVTITHTYVDESLRGQNIAAQLMAAAVET LRQRGLKARITCSYAQKWLQRHPEAGIDILA >gi|290782213|gb|ADGP01000003.1| GENE 28 22543 - 23175 653 210 aa, chain - ## HITS:1 COG:MTH1406 KEGG:ns NR:ns ## COG: MTH1406 COG0235 # Protein_GI_number: 15679405 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Methanothermobacter thermautotrophicus # 5 178 8 178 191 112 37.0 5e-25 MKRKKELCCIGKKMKEVSLVAACDGNISYRRADGTIIITPSGVPKGEIKKKDLLHVTAAG TLIEGNGKPSSEMALHIQIYIKRPDVNAIVHAHPVTATAVSIAGIPFPDHVVTEADLVLG HVPTIPYAAPGTSELAYAAAEVMAQANVALLARHGAVAVGDSLRQAFYRMETLETVAKMY REALIFSSFSQPEKEHNISPQELAALFHLE >gi|290782213|gb|ADGP01000003.1| GENE 29 23220 - 23996 725 258 aa, chain - ## HITS:1 COG:YPO3412 KEGG:ns NR:ns ## COG: YPO3412 COG1586 # Protein_GI_number: 16123561 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Yersinia pestis # 6 255 2 262 264 330 63.0 1e-90 MTIKTNKLKLYGFNNLTKTLSFNMYDVCYAISPEARRQYIEYIDEQYNSRKLTSILKNVS SIIGAHILNIAGQDYDPQGASVTILISEEPMEVADTDIVCHLDKSHLTVHTYPESHPQKG IMTFRADIEVSTCGRISPLNALNYLLDNFESDIVTLDYHVRGFTRDIMGKKLFIDHRINS IQNYISRDTRNRYDMIDVNVYQENIFHTKMILKEFDLDTYLFNVNADDLTVRQQNHIQRL VRQEMMEIFNGRNMPTMR >gi|290782213|gb|ADGP01000003.1| GENE 30 24195 - 24782 458 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 1 194 1 194 197 181 50 9e-45 MRQLVLATHNAGKIRELRTMLSPAGYEVVAVREVLPTLKEPEETGQTFLENARLKSQYYA KATGRPCLADDSGLCVEALQGRPGVYSARYAGIHGDDAANNAKLLTEIRHLPPAMRTAYY ACVLVLSFPDGREIVAEGKCHGMIIETPVGTNGFGYDPYFYLPQKGKTMAELTAIEKNTC SHRGIALKKLLQVLV >gi|290782213|gb|ADGP01000003.1| GENE 31 24793 - 25449 683 218 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0432 NR:ns ## KEGG: Vpar_0432 # Name: not_defined # Def: protein of unknown function DUF129 # Organism: V.parvula # Pathway: not_defined # 1 216 1 216 216 285 62.0 8e-76 MAELELVPVKTRILTEKDNIVDVIEEYASSLVTPSDLICVAESVVAITQHRYTRPEELTP SWQARLMRRFVPGEGSMASLYGMQAAMELEGEWKMLLAFIIGSAAKLFGKRGVWYTLCRQ AALTDDVTGTLPPYDKCIVYGPANPHGVAAAIRKRLHCFGACVADVNDLQRAAVLGYSQG LNPHHIAQVLIHNPFGNASQKTPIVIIKNYAEVAKKHV >gi|290782213|gb|ADGP01000003.1| GENE 32 25464 - 26006 647 180 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0431 NR:ns ## KEGG: Vpar_0431 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 173 1 173 179 145 45.0 6e-34 MVVYTIINIIIAVIACIAILYILFRLYAWRQGDAHFVVDVRRRTPFVLKEMTQTTAVWET EVTFHNIGKQLGTIMDFYPRPLLPQEQFDRCRVQARLTNLASERDDGYWEAAIYYPATSG LLRVTVILTSKTGNIREDLRTFPDMPIDLVYQVVARSEWYIHKARITLRAAEVYREIEGK >gi|290782213|gb|ADGP01000003.1| GENE 33 26045 - 26848 820 267 aa, chain - ## HITS:1 COG:alr0094 KEGG:ns NR:ns ## COG: alr0094 COG0796 # Protein_GI_number: 17227590 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Nostoc sp. PCC 7120 # 2 209 18 224 292 160 38.0 2e-39 MDKSKLPIGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRTAAEILSYTRDIL RFMSAQSVKLVAIGCNTVTATVYPQLMQEVPYPLIGMSKGIKTAQKISAGGTIAVFATEL TIANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGTKIMAPLQKYLAPVLQTQADT AIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMALEVLEVLKKADLLNRNSHSGTLQLCFT DATERGGMLAAQLIPKHEFSVQKIRLT >gi|290782213|gb|ADGP01000003.1| GENE 34 26861 - 27277 477 138 aa, chain - ## HITS:1 COG:CAC0271 KEGG:ns NR:ns ## COG: CAC0271 COG0824 # Protein_GI_number: 15893563 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Clostridium acetobutylicum # 7 132 9 137 138 88 37.0 3e-18 MVTIVEKVRYYETDMMGIAHHSNHIRWFECARCEYLRTAGVDLIQLQKDGIIYPIKSVSG EYIHPVYFGDVLCITATLTHLTKAQMVFSYRILRQADGILLATGTSQNVFADAHTGKPIR LDAENFAKLQRLWKEESR >gi|290782213|gb|ADGP01000003.1| GENE 35 27577 - 28452 1144 291 aa, chain + ## HITS:1 COG:Cgl2543 KEGG:ns NR:ns ## COG: Cgl2543 COG0152 # Protein_GI_number: 19553793 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Corynebacterium glutamicum # 1 289 5 289 297 296 50.0 2e-80 MKEYKPFKSGKVREVYDIGDSIIMVATDRISAFDHILKNKITEKGAILTQMSKFWFDLTK DIVPNHMESVDNHDMPEFFQQKQFIGNSMKCKKLTMIPMECIVRGYITGSGWTGYQTDGK ICGISLPQGLQESQKLPEPLFTPSTKAELGEHDENVSFETGAAILEKTFPGKGREYASKI RDYTLALYKKCADYALHRGIIIADTKFEFGLDENGNIILGDEMLTPDSSRFWPLDGYTPG KSQPSYDKQFVRDWLKVHPDSDYLLPQEIIDKTIEKYKEAYELLCGKKWRV >gi|290782213|gb|ADGP01000003.1| GENE 36 28418 - 28564 64 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSYAEKNGVYKKLPKKKLRVQMARGVFFDMVVVSFGIRYGFRSFIIT >gi|290782213|gb|ADGP01000003.1| GENE 37 28589 - 29578 1272 329 aa, chain - ## HITS:1 COG:lin2351 KEGG:ns NR:ns ## COG: lin2351 COG0306 # Protein_GI_number: 16801414 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Listeria innocua # 10 326 11 328 332 281 53.0 2e-75 MPENWLIWSIVFLAVLFDYINGFHDTANAIATSVSTRAIAPRNAIIMAAVLNFLGAMVST GVAKTIGGDLVLNPGQISLEVIVAALIGAIIWNVATWYFCIPSSSSHALIGGVIGAVCIS VGPAALDSHGIGKIILSLILSPGIALLIGYLVMIAILWIVRKRSPLLLNQKFRKMQLASA GLMAFSHGSNDAQKAMGIITLALLSGGYIQAMEVPIWVKMLCATSMALGTSVGGWRIIST MGTKIFKLESINGFAADLNSAIVIFSATFLHLPVSTTHVVSGSIMGVGSAKRVRAVHWGV ARSMLIAWVITIPITAIVSAGIYTLISHL >gi|290782213|gb|ADGP01000003.1| GENE 38 29571 - 30200 884 209 aa, chain - ## HITS:1 COG:RSc1312 KEGG:ns NR:ns ## COG: RSc1312 COG1392 # Protein_GI_number: 17546031 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate transport regulator (distant homolog of PhoU) # Organism: Ralstonia solanacearum # 7 209 7 208 208 101 31.0 1e-21 MAFHLKPKEEKFFSLLDQHAALGYEAADLLCRAMHEEISKEEALTKIEALEKAADELVMD TMKRLQKTFITPMDREDIQQLIDQLDMAIDSISDIMDKMCIYNVGQATEGAKKMTFIAAK AMKEIRKSMGYMKDLKKNYLKVEARSKKVLKLEQQCDALYHQEMAYLFTQCQDPIEIIKW KEILQSVEDVTDDCEKLVITFRKVVLKYA >gi|290782213|gb|ADGP01000003.1| GENE 39 30461 - 31747 1477 428 aa, chain - ## HITS:1 COG:ECs4928 KEGG:ns NR:ns ## COG: ECs4928 COG0151 # Protein_GI_number: 15834182 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Escherichia coli O157:H7 # 1 424 1 429 429 399 49.0 1e-111 MRIAVIGSGGREHAIVYTLAQSTVVEQLYAFPGNDAIGEIATCVPVDIGEIEKVADLCVE YQIDLVVIGPEAPLTNGLADLCRARGLLVFGPNKAAARLEGSKIFAKELMAKYHIPTASY AVFSEAAPAKDYIRKKGAPIVIKADGLAAGKGVVVARTVEEALRAVDTMMKERRFGTSGG RIVIEECMEGEEVSVLAFVDGTHIVPMVSAQDHKRIFDGDKGPNTGGMGAYAPAPVMTEA LLKETEETILFPIIRALQTEGISYNGCLYAGLMITDGGPKVVEFNCRFGDPETQAILPLL AGDLGKIMYDCAAGHLSPQDVIWHEGASCCVIMASQGYPQTSHKGDRIEGLEAVTEGIVF HSGTKKNAAQDYETAGGRVLGVTARAHTLEEAVQKAYAGIAHIHFDGNSFRHDIGAKGLS HYKNNRIL >gi|290782213|gb|ADGP01000003.1| GENE 40 31744 - 32349 784 201 aa, chain - ## HITS:1 COG:BH0633 KEGG:ns NR:ns ## COG: BH0633 COG0138 # Protein_GI_number: 15613196 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Bacillus halodurans # 4 195 3 194 511 218 57.0 7e-57 MKVKRALLSVSDKTGIVELGKALQALHIEIISTGGTLRVLREANVEVTPVQEVTGFPEMM DGRVKTLHPHIHGAILAVRDNPEHVKALVAHHITPIDMVVVNLYPFRQTVANPQVTLAEA IENIDIGGPCMVRAAAKNNAYVAVVTNPGKYKEVVSYLQKDGGFSTAYRRQLAAEAFAHT AAYDTDIAAYFSQYITKGENE >gi|290782213|gb|ADGP01000003.1| GENE 41 32349 - 32975 738 208 aa, chain - ## HITS:1 COG:NMB1566 KEGG:ns NR:ns ## COG: NMB1566 COG0299 # Protein_GI_number: 15677417 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Neisseria meningitidis MC58 # 4 208 2 203 208 183 45.0 2e-46 MRKKKVVLFASGRGSNATALYEAMRDGRIWGEAAALVCDMPQAAIIQQAQQWGLPIILAD RKKFSDQHAFETYILEKIAPFQPDLLCLAGFMRILSAYFVAAYEGKIINIHPALLPSFRG LHAQRQAFEAGVKITGCTVHFVTAQMDDGPIIVQAAVPVYESDTVQTLAERILRKEHPSF IKAVALFCADKLQIKGHTVYGTDTGEEA >gi|290782213|gb|ADGP01000003.1| GENE 42 32968 - 34035 874 355 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 5 345 3 339 354 341 50 5e-93 MLSKEMNDRLTYADAGVDIDAGNKAVALMKDAVKATYRPEVMGDLGGFGGLFSLAHTEIK DPILVSGTDGVGTKLRLAIEMGKHDTVGQDCVAMSVNDILVQGAEPLFFLDYIAVGKLNP EQVATIVKGLANACRESGCALLGGETAEMAGFYAAGDYDLAGFGVGIVARNRLITGEHIQ AGDILLGLPSTGVHSNGFSLVRKIIFERMHWKLSQVIPELGMSIGESLLTPTRLYPKVCL PLLRKFSIKGMVHITGGGFYENIPRILPPGLGVQIDVTSWPTLPIFPLLQQCGNVAPQEM YRTFNMGIGMILIVSPEEAGTVREDLAARGEASYCIGQVVENETAVVLEGGEFDA >gi|290782213|gb|ADGP01000003.1| GENE 43 34013 - 35440 1546 475 aa, chain - ## HITS:1 COG:CAC1392 KEGG:ns NR:ns ## COG: CAC1392 COG0034 # Protein_GI_number: 15894671 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Clostridium acetobutylicum # 8 472 14 474 475 480 50.0 1e-135 MFYDPIWDKQHEECGVFGIFDVTLDIPRYTYWGLFALQHRGQESGGMALVDGENIKTFRG MGLISNVFAEGVPENTGHIGIGHVRYSTTGANNPQNIQPLAVYTSMGQVALAHNGNLTNT RRLREELDRSGTAFQTTMDSEIIVNLIARSRKATIEERMMESMLRIEGAYSLVFMTKDAL YGGRDPHGFRPLCLGRMPSGGWVLASETCALDAVGATFVRDIQPGEFVKITKCGITSTRY AIMKKKQVCSFEYIYFARPDSIIDGQDVYQARLNMGAEMWRETKYDADLVISVPDSGTTA AIGYATASGIPFNHGLIKNRYMGRTFIKPDQKQRELAVRMKLNVVRSVVRGRRIVMVDDS IVRGTTSGIICNMLREAGAQAVYMCVSAPPVKYPCFYGIDTSVRKELIAARMDVEAIRRH IGVDKLHFISQAGLCRAMSHIPADDTCLACFNNHYPTAIPVTTEEGEKYALEGNE >gi|290782213|gb|ADGP01000003.1| GENE 44 35465 - 35860 435 131 aa, chain - ## HITS:1 COG:PAB1077 KEGG:ns NR:ns ## COG: PAB1077 COG0041 # Protein_GI_number: 14521838 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Pyrococcus abyssi # 3 125 42 164 174 136 56.0 8e-33 MASAHRTPAVVRDFSENAAERGFSCIIAGAGMAAHLPGVIASYTTLPVIGVPLESGSLQG MDALLAIVQMPSGMPVATMAINGAKNAALLAVQLGAVTDPVLAKKYKAYRNDMEMQVVEK NKKIQTTVQSM >gi|290782213|gb|ADGP01000003.1| GENE 45 35830 - 35958 96 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVGVVMGSDSDFPVMKKALEILKNLMLLMKYCWHPRIVRLQ >gi|290782213|gb|ADGP01000003.1| GENE 46 36167 - 37081 1099 304 aa, chain - ## HITS:1 COG:BH2534 KEGG:ns NR:ns ## COG: BH2534 COG0167 # Protein_GI_number: 15615097 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus halodurans # 4 300 2 299 305 270 51.0 3e-72 MNNSPIAASFLGMSLNTPVMGASGTFGFGIEYADFLQPEQIGAIISKGITPLPRAGNPGV RIAETPAGMLNCIGLENPGVEVFKKSILPNVVAWKVPLIVNMSASTVEEYGRLAEQLDVP GVAAVEVNISCPNVKEGGIVFGTDPQAAAAVTAAVKAHTKKPVIMKLSPNVTDIVSMAEA VEAAGADAVSLINTLTGMAIDIQHKRPLLGNITGGLSGPAIKPIALRMVWQVAKQIRIPV LGMGGICCWQDVVEFMLAGASVVAVGAYNFLQPTALADIAAGLEAYCRREGIFHIQEIVG KIND >gi|290782213|gb|ADGP01000003.1| GENE 47 37078 - 37839 710 253 aa, chain - ## HITS:1 COG:FN0423 KEGG:ns NR:ns ## COG: FN0423 COG0543 # Protein_GI_number: 19703765 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Fusobacterium nucleatum # 22 251 20 256 259 127 35.0 3e-29 MKKFLETAEIIQHEIILPTIRRMVVAAPEIAATAVPGQFVNIHYTGGGTFLRRPFGIVAA KNGHITIIYRIVGKGTEEMSRLTVGDVLSIEGPLGEGVFTVSDMPTLLAGGGVGLAPLIF LAAQSPEPIVLIAGKTAVETKCWVPFFAPYAKKIYMTTDDGSAGIKGMATAALDEIFSHH LLQRIAVCGPTPMMKSVAQAAAVKKISCEVSLEKRMACGIGVCLGCTGEYKNRDGRYKVC ADGPVFAAEEVFA >gi|290782213|gb|ADGP01000003.1| GENE 48 38109 - 39380 1820 423 aa, chain - ## HITS:1 COG:BH1376 KEGG:ns NR:ns ## COG: BH1376 COG0568 # Protein_GI_number: 15613939 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Bacillus halodurans # 58 423 22 371 372 412 64.0 1e-115 MATKVTDIESKKTTKRTTKKEMGNKSTGKKNISAAIKKKNVKLSEEERKERAAEHILQLL RLGQKQGSLTYTEIMNVMEEDELTTEQIDKMYETFADKGIDIIGEESNGNEHDEISDTEN EHVPDLRTVDLSVPEGINIDDPVRMYLKEIGRVPLLSADEEITLAKAIEKGNDENATVAD KKNGIDAKKKLTDANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLLKAVDKFDYSKGYKFS TYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLIQEKGRDPLPEEIAEKME IPVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDQEAVAPDDAASFILLKEQIEEVF SCLTDRERKVLYLRFGLKDGRPRTLEEVGQYFNVTRERIRQIEGKALGKLRNWGKREKIK DFL >gi|290782213|gb|ADGP01000003.1| GENE 49 39386 - 41197 1757 603 aa, chain - ## HITS:1 COG:BH1375 KEGG:ns NR:ns ## COG: BH1375 COG0358 # Protein_GI_number: 15613938 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Bacillus halodurans # 2 577 3 580 599 332 33.0 1e-90 MKKFSSEFIEQVRQANDIVSVVSEYVSLKQQGRNFWACCPFHHEKTASFSVAADKGFFYC FGCHAAGDVFAFIMKQENLSFTEAVTRLAERAHISLPKTEQSPQETARQNLCRRFFEINE MAGNFFHNCLLQSSLGKEGLAYFHSRHVSDDTIRAFKLGFAPDSWHMLTKAFQQRGVSGA ELVRLGLAKEKNGNFYDAFRKRVIFPIRDGRGRIVGFGGRVLDDSKPKYLNSPETPIFNK RHILFALDMAQPAIYKEGCAILVEGYMDVVSAHNRGITNVVASLGTAFTTEQARLLQRQA AQLVLAYDMDAAGRQATMRAMEIVRGLHVSIRVLSLGQGKDPDEYITTVGPDAFRQAVAA APNTLDYMLQTALQTYDSTVPEGKSAIMASIMPAVARIDDRIVLEAFLTKAAQRLQVEET AVRSEFNRFVERHPELKQGKLVITPHLERRLADSRGTDVMAAAEENILRYLMEYPHTCER IQEMIPYTLFVNPLRQHIYQFILDAYAEKRTYTKADIQDRLSVEEEKELARIMVLQDVPL DERVLNDYVKRFHLAGLQRQYAEHSKRAAAFSRTGDPQVMKELAICKEINEKIRKWSCRG ERS >gi|290782213|gb|ADGP01000003.1| GENE 50 41399 - 42304 237 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 41 271 44 274 287 95 29 4e-19 MIQFTVGTLPCMTTLGGALKHFGVSATLRRRIKHSGTCTCNGQVIGLQNFVHTGDTICIS LPVRQAFAPEPLAFTRVYEDRHLLVINKPAGLLMHPTAGQRSGTLANAVSYYYITSNQHC AYHPVHRLDKNTSGLCMIAKNPYVQSLFDHAPNRYYKRLYLALSTGYFPTPTATVHSPVG RAENSIIKRCVCLDGQKAHTDFVRLAAADTYSLLQVSLHTGRTHQIRVHCSYLGFPLLGD DLYGGTHELLSRQALHAYAMLFIHPITHKEIRLFALPPADMQALITEAGWDSLLAALSFS N >gi|290782213|gb|ADGP01000003.1| GENE 51 42317 - 43282 1261 321 aa, chain + ## HITS:1 COG:TP0662 KEGG:ns NR:ns ## COG: TP0662 COG0191 # Protein_GI_number: 15639649 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Treponema pallidum # 3 321 9 332 332 363 56.0 1e-100 MPLIGTTEMFKKAYEGHYAIGAFNINNMEIVQGVTDAAADLHSPLILQASAGARKYARPT YLRHLVEAALEEHDLPVALHLDHGADFETCKDCIDGGFTSVMIDASKYSFEDNIALTKKV VDYAHAHGVVVEGELGKLAGIEDDVRVAADEAMYTRPEEVEEFVSRTGVDSLAIAIGTSH GAYKFTPAQCRRNADGVLVPPDLRFDILEAIAKRLPDYPIVLHGASSVVPEYVKIINSNG GKMPDAIGIPEDQLRKAASMAVCKINIDSDLRLGLTAGVRQHMTAHPEHFDPREYLKDGR QNIYDIVAHKIKYVLGSEGKA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:19:20 2011 Seq name: gi|290782211|gb|ADGP01000004.1| Megasphaera genomosp. type_1 str. 28L contig00009, whole genome shotgun sequence Length of sequence - 1959 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1957 1821 ## Smon_0180 YadA domain-containing protein Predicted protein(s) >gi|290782211|gb|ADGP01000004.1| GENE 1 1 - 1957 1821 652 aa, chain - ## HITS:1 COG:no KEGG:Smon_0180 NR:ns ## KEGG: Smon_0180 # Name: not_defined # Def: YadA domain-containing protein # Organism: S.moniliformis # Pathway: not_defined # 16 566 178 746 1230 99 26.0 6e-19 MGALSIGSLSEADGKQSIALGYKAKAPGDFSTAVGQGSQANGEHAVAIGYGAITEKNQAG VSIGYKSHSMRVGGKGWNPITDQVWDDSELQIETLGLREKLKAINEEISQKQALEQKAKE KLAQFPNDPDLQEKEDKALNDVAAAKAKKNKLFATWETPTGDVAVGNSDTGLTRQITGVT AGSEDTDAVNVAQLKALNRKVDAVSTEIKNKVEDNKIHYLSVGPEHEKNHPAEGNYNNDG ARTYGAIAIGIDSVSEDADAISIGRKSYTNGIESIGIGLLANATGDYATVVGHRAQAFGK NASAYGVFSRAYGANGLAIGTAALAAGVKPLTKAEFDALPDEQKAWYNTDKGKQTEFYQY RRRDKDGEVKDIITKGLAVGNYASSIGIGGVAVGDHAKSSDIDNVNGSNFGVAIGAYSQN KVAQGVALGTLSVADRRGNKLGYLPTKNGSIEYFEDAMEAVGKGKEFTELGNEYAQVQEQ MNAAKAAYYGNPTNADLKMKYEQAEQKFSEWETKYAIMTAPWVSRKGAVSIGNDKKGQTR QIIGVAAGSEDTDAVNVAQLKALAMLPMNMYFGGKGENNTYTPGKENWSMPLNEFRMDFG DGLKATQVTDKNGKKYTLVTLDKESLKGDPAFKGDKGESGQAGKDGTNGKSA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:19:58 2011 Seq name: gi|290782111|gb|ADGP01000005.1| Megasphaera genomosp. type_1 str. 28L contig00049, whole genome shotgun sequence Length of sequence - 98870 bp Number of predicted genes - 92, with homology - 91 Number of transcription units - 49, operones - 19 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 118 - 393 174 ## COG2827 Predicted endonuclease containing a URI domain 2 1 Op 2 . - CDS 393 - 869 761 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 905 - 964 5.9 + Prom 1031 - 1090 7.2 3 2 Tu 1 . + CDS 1274 - 1714 534 ## COG1846 Transcriptional regulators + Term 1755 - 1818 7.0 + Prom 1718 - 1777 3.8 4 3 Tu 1 . + CDS 1866 - 3434 1418 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 3454 - 3502 -0.0 - Term 3445 - 3487 11.6 5 4 Tu 1 . - CDS 3516 - 4925 1768 ## COG5295 Autotransporter adhesin - Prom 4949 - 5008 8.0 - Term 5129 - 5173 10.9 6 5 Op 1 . - CDS 5188 - 6195 1345 ## gi|290967758|ref|ZP_06559311.1| Hep/Hag repeat protein - Prom 6228 - 6287 13.0 7 5 Op 2 . - CDS 6369 - 7340 189 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein - Prom 7470 - 7529 11.5 + Prom 7627 - 7686 12.2 8 6 Op 1 . + CDS 7707 - 8525 1105 ## Clole_2699 hypothetical protein 9 6 Op 2 2/0.000 + CDS 8537 - 9652 1265 ## COG0714 MoxR-like ATPases 10 6 Op 3 . + CDS 9606 - 11045 1446 ## COG3864 Uncharacterized protein conserved in bacteria + Term 11053 - 11093 8.1 - Term 11039 - 11083 9.8 11 7 Tu 1 . - CDS 11088 - 12521 1657 ## COG1757 Na+/H+ antiporter - Term 12559 - 12612 14.4 12 8 Op 1 8/0.000 - CDS 12629 - 13396 977 ## COG0084 Mg-dependent DNase 13 8 Op 2 1/0.045 - CDS 13398 - 15335 2094 ## COG0143 Methionyl-tRNA synthetase 14 8 Op 3 1/0.045 - CDS 15376 - 16245 889 ## COG0313 Predicted methyltransferases 15 8 Op 4 1/0.045 - CDS 16202 - 16978 617 ## COG4123 Predicted O-methyltransferase 16 8 Op 5 7/0.000 - CDS 16950 - 17792 762 ## COG1774 Uncharacterized homolog of PSP1 17 8 Op 6 22/0.000 - CDS 17793 - 18884 911 ## COG0470 ATPase involved in DNA replication 18 8 Op 7 4/0.000 - CDS 18927 - 19625 805 ## COG0125 Thymidylate kinase 19 8 Op 8 . - CDS 19630 - 21084 1402 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 21130 - 21189 8.8 + Prom 21496 - 21555 6.8 20 9 Tu 1 . + CDS 21581 - 22426 725 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 22430 - 22477 6.4 - Term 22412 - 22471 14.2 21 10 Tu 1 . - CDS 22486 - 22932 623 ## Acfer_1724 GtrA family protein - Prom 23098 - 23157 5.0 + Prom 22865 - 22924 5.8 22 11 Tu 1 . + CDS 23108 - 23542 668 ## COG1846 Transcriptional regulators + Term 23557 - 23596 4.1 - Term 23378 - 23409 -0.1 23 12 Tu 1 . - CDS 23596 - 24735 1120 ## COG1489 DNA-binding protein, stimulates sugar fermentation - Prom 24773 - 24832 8.9 24 13 Op 1 . - CDS 25569 - 26204 643 ## TepRe1_1053 Lj928 prophage protein 25 13 Op 2 . - CDS 26225 - 26791 906 ## LKI_09680 putative scaffolding protein - Prom 26845 - 26904 3.6 - Term 26876 - 26904 -0.1 26 14 Op 1 . - CDS 26926 - 27318 434 ## gi|290967780|ref|ZP_06559333.1| conserved domain protein 27 14 Op 2 . - CDS 27325 - 27537 238 ## gi|290967781|ref|ZP_06559334.1| conserved hypothetical protein 28 14 Op 3 . - CDS 27597 - 27842 266 ## LCRIS_01215 hypothetical protein 29 14 Op 4 . - CDS 27845 - 28936 666 ## COG5585 NAD+--asparagine ADP-ribosyltransferase 30 14 Op 5 . - CDS 28997 - 29461 263 ## Closa_4076 Integrase catalytic region 31 14 Op 6 . - CDS 29551 - 32004 3344 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 32056 - 32115 7.2 + Prom 32181 - 32240 9.2 32 15 Op 1 1/0.045 + CDS 32276 - 32998 804 ## COG0584 Glycerophosphoryl diester phosphodiesterase 33 15 Op 2 . + CDS 33004 - 34368 759 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 34384 - 34419 7.1 + Prom 34389 - 34448 5.5 34 16 Tu 1 . + CDS 34489 - 34920 232 ## COG2832 Uncharacterized protein conserved in bacteria + Term 34926 - 34974 14.5 - Term 34914 - 34962 16.4 35 17 Tu 1 . - CDS 35015 - 36469 1887 ## COG2195 Di- and tripeptidases - Prom 36520 - 36579 6.7 + Prom 36528 - 36587 7.5 36 18 Tu 1 . + CDS 36736 - 38808 2180 ## COG1297 Predicted membrane protein + Term 38826 - 38863 6.0 + Prom 38946 - 39005 4.3 37 19 Tu 1 . + CDS 39035 - 39862 508 ## COG1145 Ferredoxin + Term 39906 - 39949 5.5 - Term 39610 - 39648 -0.8 38 20 Tu 1 . - CDS 39853 - 40449 474 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 40560 - 40619 8.7 + Prom 40556 - 40615 10.5 39 21 Tu 1 . + CDS 40654 - 41478 1017 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 41479 - 41532 7.1 + Prom 41513 - 41572 4.4 40 22 Tu 1 . + CDS 41596 - 42276 841 ## COG0603 Predicted PP-loop superfamily ATPase + Term 42283 - 42321 6.9 + Prom 42301 - 42360 4.6 41 23 Tu 1 . + CDS 42445 - 44190 1812 ## COG0469 Pyruvate kinase + Term 44199 - 44246 10.2 - Term 44195 - 44228 5.4 42 24 Tu 1 . - CDS 44249 - 46324 2404 ## COG0480 Translation elongation factors (GTPases) - Prom 46556 - 46615 7.1 + Prom 46578 - 46637 4.8 43 25 Op 1 . + CDS 46865 - 48472 986 ## COG0286 Type I restriction-modification system methyltransferase subunit 44 25 Op 2 . + CDS 48459 - 48770 114 ## Pedsa_1278 hypothetical protein + Prom 48810 - 48869 4.5 45 26 Op 1 . + CDS 48941 - 49597 364 ## Pedsa_1278 hypothetical protein 46 26 Op 2 . + CDS 49601 - 52930 1792 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 52963 - 53010 3.1 + Prom 53104 - 53163 7.0 47 27 Tu 1 . + CDS 53209 - 54576 1788 ## COG1362 Aspartyl aminopeptidase + Term 54602 - 54642 6.5 + Prom 54647 - 54706 9.7 48 28 Tu 1 . + CDS 54743 - 55633 899 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Term 55636 - 55691 13.6 49 29 Tu 1 . - CDS 55698 - 57017 2097 ## COG2610 H+/gluconate symporter and related permeases - Prom 57124 - 57183 6.5 50 30 Tu 1 . + CDS 57282 - 58184 689 ## COG1313 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins + Term 58209 - 58261 17.1 - Term 58197 - 58249 17.1 51 31 Op 1 . - CDS 58273 - 59205 1130 ## COG0679 Predicted permeases 52 31 Op 2 . - CDS 59236 - 60213 1008 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 60255 - 60314 1.8 - Term 60257 - 60306 14.3 53 32 Op 1 1/0.045 - CDS 60326 - 60892 535 ## COG0193 Peptidyl-tRNA hydrolase 54 32 Op 2 11/0.000 - CDS 60911 - 61876 1342 ## COG0462 Phosphoribosylpyrophosphate synthetase 55 32 Op 3 . - CDS 61951 - 63324 1518 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 63414 - 63473 6.6 - Term 63413 - 63461 6.3 56 33 Tu 1 . - CDS 63494 - 64006 493 ## COG3584 Uncharacterized protein conserved in bacteria - Prom 64141 - 64200 9.7 57 34 Tu 1 . + CDS 64114 - 64320 65 ## gi|290967814|ref|ZP_06559367.1| hypothetical protein HMPREF0889_1488 58 35 Tu 1 . - CDS 64307 - 65890 1886 ## COG0038 Chloride channel protein EriC - Prom 65995 - 66054 5.5 59 36 Tu 1 . + CDS 66044 - 67234 628 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 67319 - 67358 8.6 - Term 67307 - 67346 8.6 60 37 Op 1 . - CDS 67474 - 68067 757 ## COG4717 Uncharacterized conserved protein 61 37 Op 2 5/0.000 - CDS 68115 - 70454 2270 ## COG4717 Uncharacterized conserved protein 62 37 Op 3 . - CDS 70460 - 71725 1390 ## COG0420 DNA repair exonuclease 63 37 Op 4 . - CDS 71718 - 73121 1342 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 73245 - 73304 7.4 + Prom 73225 - 73284 6.3 64 38 Tu 1 . + CDS 73312 - 74304 813 ## COG0502 Biotin synthase and related enzymes 65 39 Tu 1 . - CDS 74289 - 75593 1173 ## COG5026 Hexokinase - Prom 75631 - 75690 7.5 66 40 Op 1 16/0.000 + CDS 75847 - 76041 327 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 67 40 Op 2 5/0.000 + CDS 76095 - 76865 995 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 68 40 Op 3 3/0.000 + CDS 76880 - 78043 979 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes + Term 78077 - 78112 5.1 + Prom 78067 - 78126 8.4 69 41 Op 1 . + CDS 78286 - 78891 341 ## COG0352 Thiamine monophosphate synthase 70 41 Op 2 . + CDS 78894 - 79397 415 ## gi|290967827|ref|ZP_06559380.1| hypothetical protein HMPREF0889_1500 + Term 79398 - 79444 17.5 - Term 79386 - 79432 17.5 71 42 Op 1 . - CDS 79444 - 80043 682 ## gi|290967828|ref|ZP_06559381.1| hypothetical protein HMPREF0889_1501 72 42 Op 2 . - CDS 80058 - 81497 1879 ## PTH_0853 hypothetical protein 73 42 Op 3 . - CDS 81560 - 82864 1539 ## COG0427 Acetyl-CoA hydrolase - Term 82880 - 82924 7.4 74 42 Op 4 . - CDS 82956 - 84407 1736 ## COG2368 Aromatic ring hydroxylase - Prom 84515 - 84574 17.3 + Prom 84727 - 84786 4.8 75 43 Op 1 . + CDS 84815 - 85099 475 ## COG0694 Thioredoxin-like proteins and domains 76 43 Op 2 . + CDS 85175 - 85768 454 ## gi|290967834|ref|ZP_06559387.1| hypothetical protein HMPREF0889_1507 77 43 Op 3 . + CDS 85792 - 86028 380 ## bpr_I2192 acyl carrier protein 78 43 Op 4 . + CDS 86031 - 86702 591 ## COG0491 Zn-dependent hydrolases, including glyoxylases 79 43 Op 5 . + CDS 86686 - 87753 917 ## PANA_2272 Hypothetical Protein 80 43 Op 6 . + CDS 87740 - 88921 724 ## bpr_I2197 acyl-CoA reductase 81 43 Op 7 . + CDS 88934 - 90343 1112 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Prom 90351 - 90410 11.2 82 44 Op 1 . + CDS 90442 - 91902 1345 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 83 44 Op 2 . + CDS 91967 - 92332 453 ## Rumal_1565 hypothetical protein 84 44 Op 3 . + CDS 92325 - 93161 1031 ## COG0489 ATPases involved in chromosome partitioning + Term 93177 - 93211 6.2 - Term 93165 - 93199 6.2 85 45 Tu 1 . - CDS 93236 - 93847 680 ## gi|290967843|ref|ZP_06559396.1| hypothetical protein HMPREF0889_1516 - Prom 93893 - 93952 2.9 - Term 93884 - 93930 0.7 86 46 Op 1 . - CDS 94006 - 94146 60 ## gi|290967844|ref|ZP_06559397.1| hypothetical protein HMPREF0889_1517 87 46 Op 2 . - CDS 94200 - 94496 454 ## Vpar_1746 hypothetical protein 88 46 Op 3 . - CDS 94515 - 95681 1418 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 95930 - 95989 11.4 89 47 Tu 1 . + CDS 95985 - 96902 264 ## PROTEIN SUPPORTED gi|30995401|ref|NP_438934.2| transcriptional regulator + Term 96946 - 96993 3.4 - Term 96934 - 96981 7.2 90 48 Tu 1 . - CDS 97019 - 97105 56 ## - Term 97278 - 97313 6.0 91 49 Op 1 . - CDS 97340 - 98218 899 ## Shel_06680 hypothetical protein 92 49 Op 2 . - CDS 98249 - 98668 390 ## gi|290967850|ref|ZP_06559403.1| hypothetical protein HMPREF0889_1523 - Prom 98712 - 98771 6.1 Predicted protein(s) >gi|290782111|gb|ADGP01000005.1| GENE 1 118 - 393 174 91 aa, chain - ## HITS:1 COG:BH0048 KEGG:ns NR:ns ## COG: BH0048 COG2827 # Protein_GI_number: 15612611 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Bacillus halodurans # 4 91 3 90 94 80 50.0 5e-16 MAGYYTYIVRCADRSLYAGWTTDVKRRVRAHNRGTGAKYTRARRPVRLVWQAAFATKREA MRWEWKIKQLSKAQKEALCCRRQGAMYRATE >gi|290782111|gb|ADGP01000005.1| GENE 2 393 - 869 761 158 aa, chain - ## HITS:1 COG:SPAC57A10.03 KEGG:ns NR:ns ## COG: SPAC57A10.03 COG0652 # Protein_GI_number: 19114220 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Schizosaccharomyces pombe # 10 145 6 144 155 149 48.0 3e-36 MADTKTYAVFKTNCGDFTVELFAQQAPITVENFIKLATSGFYDKTIFHRIIADFMIQGGD PEGTGFGGSEETIPDEFAPDLNFNEPGMLAMANAGPNTGSSQFFVTVVPTPWLFRHHSIF GKVVEQYEVVEKISKVKTDAMDKPVSDVLLETVQIITK >gi|290782111|gb|ADGP01000005.1| GENE 3 1274 - 1714 534 146 aa, chain + ## HITS:1 COG:BS_ywoH KEGG:ns NR:ns ## COG: BS_ywoH COG1846 # Protein_GI_number: 16080697 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 13 131 8 126 137 64 31.0 5e-11 MIDDETQKKDEALLHQIFVTMRLFTKAINDTIKRYNVYSSEWSVLRYLTNHPSVSQTAIA TALQIEPAAISKTLAKMEKKGLIYRTCKEDKREKYITLTEQGRTLYPLVAAHVNEQRSLA LRGLSAEDRKAARLFINTMFENLYEH >gi|290782111|gb|ADGP01000005.1| GENE 4 1866 - 3434 1418 522 aa, chain + ## HITS:1 COG:MJ0765 KEGG:ns NR:ns ## COG: MJ0765 COG1151 # Protein_GI_number: 15668946 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Methanococcus jannaschii # 4 521 9 548 548 471 45.0 1e-132 MEQQMFCFQCEQTGGGTGCTGCAGVCGKSETAAALQDILTGALVNLAAVCPDETPSPTLS RLLLRSLFATITNVDFNPQTLQAHIDEVHALLKTYGGSPAQDFSLQEIWHAQEDIRSLKS LLLFGIRGMSAYAYHALMLGRSNAEVNSFLCKGLAALQASLSVEELLPLVMEAGKVNLTC MAMLDEANTGTYGKPEPATVSLTIEKGPFIVVTGHDLKDLELLLKQTEGTGVSVYTHGEM LPAHAYPELKKYPHLKGNFGTAWQNQQKEFDAIPGALLFTTNCLMPPRPSYADRVFTTEA VSYQGTVHIDDRKDFTPVIQKALALGGYAEPQHFTGINGGTSVVTGFGHDAVLSVADTVI DAVKQGKIRRFFLVGGCDGARPGRNYYTEFVKKTPADSLILTLACGKFRFNDLDLGTVGG LPRLLDMGQCNDAYSAIKVALALADAFHCGVNDLPLSLVLSWYEQKAVCILLTLLYLGIQ NIYLGPTLPAFLSPHILSYLVEQYHISPISTPEADLKKILAH >gi|290782111|gb|ADGP01000005.1| GENE 5 3516 - 4925 1768 469 aa, chain - ## HITS:1 COG:FN0471 KEGG:ns NR:ns ## COG: FN0471 COG5295 # Protein_GI_number: 19703806 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 197 469 40 311 340 85 30.0 2e-16 MKGKTTIAVLMAATMAVGGAVFAADNVKISDKATIVIGYPADKDGKTQPHGKPATKDTAS IDAAAGASVLLDSHPVAKDEKHKTINEYEDLDWPYGVNEKGKRVGPSNLMAHLKPKDEAF DVARVAIHYTRTDYGLNAISSGNGTAIGADTVAFGKGAVAMGFNARTGVAFYDNHATKAE RDAKAVVHDNMRIVGSENALALGSNSDAFGENSSAIGAGASTGWVEETKRAGAYDKNTPD AYKHVDEDTIATNKPIKYNGPLRGEDTEKAVTDQKTYRVHESKNALAIGAKSKVRADNSV ALGVNSVALEDNTVSVGTATLQRRITNAADGRWEAGSHDVATTGQVYKEMGKTGAMAAAL AGLHPMAQSQTGWEVSAAMGTYNGKSAVALGGFYHTNPNMMISLGAASAFSGHVTGNLGI TYRVGAGNTGTEQDMSAVAQQIRALTQRVNALAAENQQLRQAVQQLSRR >gi|290782111|gb|ADGP01000005.1| GENE 6 5188 - 6195 1345 335 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967758|ref|ZP_06559311.1| ## NR: gi|290967758|ref|ZP_06559311.1| Hep/Hag repeat protein [Megasphaera genomosp. type_1 str. 28L] Hep/Hag repeat protein [Megasphaera genomosp. type_1 str. 28L] # 1 317 1 317 335 528 100.0 1e-148 MKKSISIAAVLAVVTAVSGAVGAASQGTIQVAKGSVLQVGRVLPSLTNDNKDREGALPDK ARVDVQAGASVLLTVHPAGIKGKVPAQVQVDYPYGTDVNNAQKPAHPVSLQSQILLDKPF DTAKVTIHYTRTNFGLNALSAGKGGTAIGADSIALGAESTALGDNARTWFMWMGKDRVVR LKPILSSQATAIGANTLAFGKNSTALGVGASTGVLTTFDGTPIVGTIRKDVEENADAAHP LQAKAYDNGVALGAFSKVRARNSVALGVNSEAVSDNTVAVGNAQDTRRITFVAPGVEAGD AATVGQLREAEQKIYVLQQQIRALQQQVQQLLQKK >gi|290782111|gb|ADGP01000005.1| GENE 7 6369 - 7340 189 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 192 315 224 348 348 77 35 3e-13 MNGKKITTVLGMVLLTSITCVGAAFHPGDRGTQITEIQQALVKQGMHLAVDGDYGADTQE AIRTFQKKHGIYADGVMGAKTYAVLMKKNMPENKTIRFVNKTEDLVEGPVVANVATANHE VRTIQQALVRQGYAVDVDGVFGPGTEQALRRFQARRGLTVDGVIGPETFYALTGQVLASG SVHVGNTAELNVAPTGSARSASATVRRLLGVAQRYMGTPYVFGGTTPSGFDCSGFTRYVF SEVGVSLPRMADAQYSMGTSVSQEKLRPGDLVFFTTYTPGVSHVGIYLGKRQFINASNDG VSVADLNSTYWAQRYIGAKRILG >gi|290782111|gb|ADGP01000005.1| GENE 8 7707 - 8525 1105 272 aa, chain + ## HITS:1 COG:no KEGG:Clole_2699 NR:ns ## KEGG: Clole_2699 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 5 269 2 264 267 261 51.0 2e-68 MDTQEEKKYLKMLHLNPYAIKNIPHPTEEMKLLAVRENGLLLQYIDDPTPEIQAAAIENT PKAIRFLADPSPEIVTAVIKKGWNNLEYIKNPSPALIRLALQESGWAIRYVPNPSVDLQL LAVQKNYDAIKFIKDPAPEVQEAAVKSNYEALRYIENPTREARCSGVKENERALPLLREV TKEDVIEYLKLNILSVKYLPPSIVLSDEEWEAILTDVLSDENVEEKYVRNFINCRAFDRD GDVYPMNKLQFIYDRGSKKAKRITVDEKLSFK >gi|290782111|gb|ADGP01000005.1| GENE 9 8537 - 9652 1265 371 aa, chain + ## HITS:1 COG:CAC1858 KEGG:ns NR:ns ## COG: CAC1858 COG0714 # Protein_GI_number: 15895133 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Clostridium acetobutylicum # 1 367 1 372 377 319 45.0 5e-87 MNFIETLQSVELVLASRDVPLLVGETGIGKTALATALAKKNNWSLLVLDGNLLKEGEIGG LPTISTYTRKNRYGKTVKETTTTYAVHHTLREIDEEIAEGRTVLLFIDEINRCEHAVQQE LMNLILNKEINGYHLHPEVRIIAAMNPSDSYDYEAVDMDAAQQNRFVWLHMEPDYAQWLD WARTAGIAPEVMEFIATFPEYLNQTHEDDINATPRSYERISHAFKLYQTRKDTIPKDVFF NVIRGNVGKIIAEEFTTFIRSDHTPLLTYNDVFEGTPNDAELSARIQKESHTRLYLAAKN MLQLLEKSITEDRPATVEQLTRLIALLNMYPVDLMVGLMKDMKYSTPKLYAQALQEDDFI TTYFKAYCQVH >gi|290782111|gb|ADGP01000005.1| GENE 10 9606 - 11045 1446 479 aa, chain + ## HITS:1 COG:CAC1857 KEGG:ns NR:ns ## COG: CAC1857 COG3864 # Protein_GI_number: 15895132 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 15 450 2 429 456 272 35.0 9e-73 MILLLPISRLIVRCIKMSASIEGDALLLLQELQKHYEDYMATEKHTEETFRMPESFGVDF FHIIDRVTLSLMEDTDNFYGYFSFQMKKAVRFDIAGPTAVSFKSAAYVLYFNPFLFLPLT AKQMATAIKHDILHIVSLHLIRARDLKDTYSKRVLNIAMDVVVNTYLKNLPPDAITLQWV NMQYGLFLPPFETFEYYAEKIQAAVEIRQRNTPYTGSDHSNSIQLAFDPETTHDVWEESD ELDTATLQKFTEKYIDAARKGSLSNYLESMIAELKKEAPGLPWSLYVKKFTGAVAAEKKK TVTRRNRRQPERLDLRGKLTGHTARLLVALDISGSISDSEFKQAMVEVLEIVKNFKHEIT LVECDDEIRRSYPIKTLADLQPRLDVRGGTRFSPVFAYANSRRIDVLIYFTDGKGEQKLQ VPPKNYKVLWVLTGDALSLKEPHGIIKYLKPDKSDDANLDFDNVEKGGYSMNNQEKILL >gi|290782111|gb|ADGP01000005.1| GENE 11 11088 - 12521 1657 477 aa, chain - ## HITS:1 COG:FN1420 KEGG:ns NR:ns ## COG: FN1420 COG1757 # Protein_GI_number: 19704752 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 33 455 6 428 445 431 55.0 1e-120 MVKTQKEVPEKANVKMEIEIGEKISREGRAFCSGKALIPFAVFIVLYLGSGIFLQLQGVP SAFYQFPAPLAAVAGIIAAFFILPGHFEEKFETFVKGCGDSNIIIMCLIFLLAGGFASVC KAMGGIDAAVNLGLTYIPTAYLGVGIFIISSFIATATGTSVGSAAAVGPIAIAVAERTGM SLPLIMGCVIGGIMLGDNLSIISDTTIASTRTQGCAMKDKFRLNFWLTLVPALITVFLLI MHSGAMPTVAIGNHDFSLLRVLPYIVVLVTAIWGMNVFLVLVMGTVLAGCIGLYYGELTV LSWTQAMYTGFKGMCDIFFLSLLSGGLAAMVSKAGGITWLLLQVQRGIRGKKTAELGISA LVSLSDIALANNTVAIIINGEIAKSICYRFHVDPRRSAALLSTFSTIFQGLIPYGAQMLM VTGFAGGKVSPLAVLPYTWFIYLLALSALVSIFIPFSDGFIRKNPWDFTLRKPVNKG >gi|290782111|gb|ADGP01000005.1| GENE 12 12629 - 13396 977 255 aa, chain - ## HITS:1 COG:BS_yabD KEGG:ns NR:ns ## COG: BS_yabD COG0084 # Protein_GI_number: 16077107 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Bacillus subtilis # 1 254 1 254 255 248 47.0 1e-65 MVFDTHCHIHDEAYDSDREAVIRRAFAAGVQYMMFPGTDLPTSSAAVALTHRYEGVYAAV GIHPEDAASATPQGFAQLRKWLREEPKVVAVGEVGLDYHWPEPSHEIQKAVFIEQVKMAV ELDMPIDIHDREAHGDTLAILRQYGKGIRGVFHCYSGSLEMARELLAMGFYFGFTGTTVF PNSKKLKRIAANLPLERMLIETDSPYLTPPPYRGKRNEPAYVRYVAAEIARLRNMRAEEV ERITMENGKRIFNIP >gi|290782111|gb|ADGP01000005.1| GENE 13 13398 - 15335 2094 645 aa, chain - ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 520 1 517 536 632 56.0 0 MAEKKRYYITTPIYYPSAKLHIGHTYCTTIADTLARFHRLRGDEVFFLTGSDEHGQKIQR AAEEKGIQPIEYVNDIVALFQDLWKRLQISNDDFIRTTEARHEKVVQKLMEISYQKGDIY KGEYTGWYCTPCESFWPENKLPEGKHICPDCGRPLELVKEEAYFLKMNKYADRWLQFIEE NPEFIQPESRRNEMIAFVKSGLEDLCVSRTSFDWGVKVPWDPKHVVYVWFDALANYLTAI GYLDNPEQFKKFWPATLHLVGKEIVRFHTIIWPIILMSCDLPLPKQVFGHGWLIVDGTKM SKSLGNVVDPVPLIARYGADALRYYLLKEIRLGQDGNFSLPSFLGRINSDLANDLGNLLQ RTLAMVEKYEQGIVPAPSATAPVDMQLRQAAAEMLDVYTQAMETMQINEAINALWGFIHR TNKYIDETMPWSLAKEDAQRERLRTVLYNLIEALRIIAISVSPIMPACAEEIWRQLGLQA FRTVGLEAAATWGAYPAQTRIYKGKALFPRYDMEEEVAAMTSGSAKKPVCTAAKEEIKAE ITIDDFSKADLRAGKILACEKVKKSKKLLKIQLDLGTEERQIVSGISSYYTPEELVGHTV IAVTNLKPVTLCGEVSKGMLLAAADGDGKLQVVFVDGMAPGSRVR >gi|290782111|gb|ADGP01000005.1| GENE 14 15376 - 16245 889 289 aa, chain - ## HITS:1 COG:BH0049 KEGG:ns NR:ns ## COG: BH0049 COG0313 # Protein_GI_number: 15612612 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Bacillus halodurans # 16 284 13 283 289 267 52.0 2e-71 MEWQKRGMVMAEIFKKGTLYLCPTPIGNLEDITYRTVRCLREADCIAAEDTRHTRQLLEA YNIHTALVSYHEHNKREKGPQLIEKLQSGQMVAAVSDAGMPAICDPGSDLVRLALHANIP VVPLPGANAGLTALIASGMDTTRFIFIGFLPKTKKHRRPVLVSLAASEGTLIFYEAPHRI QAVLQEMTEILGDRECVLCRELTKKYEQYFRGTLSQVTAQLCAQGIRGEFVILVAGKCAE ERNPSTAVSEYSRLVQAEIQRGRTKKEAIRVVAAQLGVSKRDVYQATLL >gi|290782111|gb|ADGP01000005.1| GENE 15 16202 - 16978 617 258 aa, chain - ## HITS:1 COG:SA0445 KEGG:ns NR:ns ## COG: SA0445 COG4123 # Protein_GI_number: 15926164 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Staphylococcus aureus N315 # 9 246 2 241 241 166 36.0 3e-41 MSRKLTMKVKDGERLDTLVRDGMKLIQREDQFRFSLDTVLLANFGSVPHSPVLDLGTGTG AIPLILTARGVRAVTALELNPIMADIAARNVILNHKEESIRIKHGDYRQPGKWLKSGSFA AVYANPPYREKQRGAYSPVPGIRRARHEETATLAEVLAAASFALKYGGYFRMVHIVERLA DIFAVMRYYKIEPKRLLCIHGRLHKQGKICIIEGIRGGNPGLEVLPPLVVHNQDGSYSKT VLQYYGVAETRHGDGGNL >gi|290782111|gb|ADGP01000005.1| GENE 16 16950 - 17792 762 280 aa, chain - ## HITS:1 COG:BH0045 KEGG:ns NR:ns ## COG: BH0045 COG1774 # Protein_GI_number: 15612608 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus halodurans # 3 263 4 252 275 306 56.0 2e-83 MIVVGVRFKPAGKIYYFNPQDVVLSIEDGVIVETARGMEFGSVVIAPREVADSEVIQPLK PIIRRASPKDFKQLAKNKEREKKAFSICLEKIAKHKLPMKLIDVDYTFDMGKIIFFFSAE GRIDFRELVRDLAAVFRTRIELRQIGLRDEAKMIGGMGCCGRALCCASFLGDFKPVSIRM AKSQGMFLNPSKISGICGRLMCCLRYENDSYTSGELTCQNCQRSCMQQKTPTVGQKVMTD EGVGAVLRIHSKDQTVRVQLDSGHCINVSWSDVAEIDHES >gi|290782111|gb|ADGP01000005.1| GENE 17 17793 - 18884 911 363 aa, chain - ## HITS:1 COG:AGc2759 KEGG:ns NR:ns ## COG: AGc2759 COG0470 # Protein_GI_number: 15888822 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 63 238 50 243 350 96 32.0 7e-20 MCSIVEMMVNLDFTVIFFYNNILESRIIRKESGMDVSYFDNVIGQCAVKEKLLHWVRTDH VPHALIFSGPDGVGKTTLACAFAEIIVQHPVFTGGIPVLQDRAYAAFGSEVYFIAPQTSQ LKVEQFRQVREKLFLGNVANHSRVCIIDHGETMNAAFANGMLTILEEPPQGVIFIIITNQ PERLLTTVRSRCVECMLAPVAEAALRQALAAAYPQSPEKREKAVRAAAGNVARAYEIMAG DEKDYFQEAVDFLQIIAEHAAPYTKLQFLCAAWDKREVLLFLQNLLLFIRDAAVWEQTED RNLLQQVQAVAALRQAALTWRLSHLLAMEQVAEECRRAILLNVNVRLVIDYLCIQCIRIK GGI >gi|290782111|gb|ADGP01000005.1| GENE 18 18927 - 19625 805 232 aa, chain - ## HITS:1 COG:FN1323 KEGG:ns NR:ns ## COG: FN1323 COG0125 # Protein_GI_number: 19704658 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Fusobacterium nucleatum # 3 219 2 219 225 192 42.0 6e-49 MKGKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQGQFGK QADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYIIIADRYTTSNMLYQMIKISAPAARQ TYLDWLWDFEFIKMGLPIPDIVILLDVPLAVTETLMAARQGKTGGETGDIHEKNRAFLQQ CHAAYEELAHMYGWRRVACTTQGKMRSPQSIQEEVYTVVATALFDNREGYSI >gi|290782111|gb|ADGP01000005.1| GENE 19 19630 - 21084 1402 484 aa, chain - ## HITS:1 COG:FN0501_1 KEGG:ns NR:ns ## COG: FN0501_1 COG1982 # Protein_GI_number: 19703836 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Fusobacterium nucleatum # 1 484 1 489 503 354 39.0 2e-97 MDKIKQQQTPFVDALEEYCRLQMIPFHTPGHKGGRQASAYQRTLFGEALRRDLGLMYALD NLFQPVGPLQEAMALAADLYGAGKSFFSVNGTTACNEAMIMAVCHEGEEIIIPREAHRSV LGGIVLSGAMPVYLPSRFASEEQVSLGPTPAAVMRTIQAHPRAKAVLLTYPTYEGIAIDL APMIHYAHERGLYVLVDEAHGAHLPFHPDLPASALACGADCAAQSTHKLTGSLTQTSMLH CRADFPRLTQVTAAMSFVQSTSPNYWLLASLDSARHQLATAGPALIGKAVQLARQVRSEI NGIQGLHSFGREILQYEGLSGLDETKICIDFSGVGLSGGEAEKQLRAQGIEVELTAGNHV LALLTMGDDEHTAAALVQACRRIAEKPGGQPTAVYRELPLPVPVVVQTPRQAWRGTKERV PLKKAVGRIVGETITFYPPGIPVIAPGERLTGECVRYIQEKMNRQYVPNGASDITLQTIL AVKE >gi|290782111|gb|ADGP01000005.1| GENE 20 21581 - 22426 725 281 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 2 274 4 278 290 211 39.0 1e-54 MSTKRVLAIHDLCSFGRCSLTAAIPVISAMGIQVCPFPTALFSNNLTYGTFTCTDCTPDM PQFMAQWQKLGYTYDAVYSGFLGNAEQISLVIEAINRFHRTDTVIIVDPAMADDGKLYPV FTGKIVTSMRTLVQKADVITPNYTEATMLLNEPYTPQAPTTKKIQRLCKDLTTLGPSQVI ITSVPCDHDKLKVVCYNARTMIYDEYVIPRIPFATCGTGDIFTSVVTGSLLQNKSLSATI RWAADFVSYAINYTYKAGTDSREGVQLEPCLSYLRGLQQQK >gi|290782111|gb|ADGP01000005.1| GENE 21 22486 - 22932 623 148 aa, chain - ## HITS:1 COG:no KEGG:Acfer_1724 NR:ns ## KEGG: Acfer_1724 # Name: not_defined # Def: GtrA family protein # Organism: A.fermentans # Pathway: not_defined # 12 147 5 130 132 109 50.0 4e-23 MKEKKILGFTYTHNEKVKFMLYLVVGGTAALVEWGLFYLFLSIFSGIKREAFTGTVLAAT ALAFAIATLYHYFLGNVFVFEQGSRHERGAEVSLVFLVSTIGLLGNLVLMWIFTSPRILG LPPFYSKVLASAVVTVWNYGSRKKWIFK >gi|290782111|gb|ADGP01000005.1| GENE 22 23108 - 23542 668 144 aa, chain + ## HITS:1 COG:SAP009 KEGG:ns NR:ns ## COG: SAP009 COG1846 # Protein_GI_number: 16119209 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Staphylococcus aureus N315 # 6 136 5 134 139 101 41.0 4e-22 MATYTHCINFVLTIAQHEVFLTFSETLSKFGITPGQYGVLACLWESQGGITPKEIASALH VENSTISGVLDRMQKQGLVTRILNPENRRSIHVKATAKGMALKEPLLQEVEQLNQQVLQD LTAQEQVQLFNLLRRIKGVSIDTM >gi|290782111|gb|ADGP01000005.1| GENE 23 23596 - 24735 1120 379 aa, chain - ## HITS:1 COG:MTH1521 KEGG:ns NR:ns ## COG: MTH1521 COG1489 # Protein_GI_number: 15679518 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Methanothermobacter thermautotrophicus # 10 197 13 200 240 144 38.0 2e-34 MQETSEVKVGIFLNRPNRFLCEVEIDGTIECCHLPNPGRMWELLFPRVRMYVRRSGQKNR RTAYDVIGVEREGIPILLDTQYTNEVAARLIQEKKIPAWKDWQVLRREVAVGHSRFDLLL GRGPERFYVEVKSCTLFGRHGAMFPDAVTERGKKHLLTLAAMREEGIRTGILFLVQWDRA RWFLPDYHTDPAFASVFFNVAPRLDWQAFSVHWTPTFQMPEPAGTLFYPAQVLDKENHDS GVYLVILQVERSVRIEIGAMGERIFPAGYYVYIGSAKKHLTARLERHKRLRKKMHWHIDY LRQQAKVTATVPIRTSAPLEHSLAAAVQAVSEGSVPGFGCTDCSCRSHLFMFSQNPLQQR DFVQVIEDFRINRLEALIE >gi|290782111|gb|ADGP01000005.1| GENE 24 25569 - 26204 643 211 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_1053 NR:ns ## KEGG: TepRe1_1053 # Name: not_defined # Def: Lj928 prophage protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 4 188 10 194 314 187 55.0 2e-46 MAINTLEMAKLFQQSLDKQMLVGATSGWMEANATQVKYNGGDTVRMPEISTSGLAKYDRD KGFNQGAVTLKYEDYKLTQDRGRTFHLDAMDVDESNFIAAAGNVMGEFQRVQVVPEVDAY RYSKIAELAKKVNHTTEAEPAKTTILEMLDDEITKIQDVIGENSGLVIVMSTPVRTILNN AKDIQKYFERSHREDGKIPYGRKVFTSEQER >gi|290782111|gb|ADGP01000005.1| GENE 25 26225 - 26791 906 188 aa, chain - ## HITS:1 COG:no KEGG:LKI_09680 NR:ns ## KEGG: LKI_09680 # Name: not_defined # Def: putative scaffolding protein # Organism: L.kimchii # Pathway: not_defined # 1 186 1 189 209 74 33.0 2e-12 MTKEELKELGLTDEQVTKITEDYGKNYVSKSQFNEKNEALKNAEKEKGELTKQIEGLKKN NDSNADLKKQIEAMQAAAKTMETEHATQIAQMKLDAAVEHSLTVAKAKNTKAARALLDLK DAKLDEKGEVIGLSDKIKELQKSDAYLFESNDGQKKEVGGVHPGAGSDNNGTAAKLTVQQ QFERALGI >gi|290782111|gb|ADGP01000005.1| GENE 26 26926 - 27318 434 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967780|ref|ZP_06559333.1| ## NR: gi|290967780|ref|ZP_06559333.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 130 1 130 130 254 100.0 1e-66 MKEVIKTIPVEDGKLYALAGENRYLLADCGAGIEIVEDSEELPVLGKGRVITNRGAALLI TFEHKPGFSVNLESVQGFGFQGRVLRQDGIYEKVIFAHCLLASDLDLTEAGECTFEIQCS AEMIKRLRAL >gi|290782111|gb|ADGP01000005.1| GENE 27 27325 - 27537 238 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967781|ref|ZP_06559334.1| ## NR: gi|290967781|ref|ZP_06559334.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 70 1 70 70 129 100.0 9e-29 MQKQEFMDNVWSDFEFSYEEPEYYINAIDGIYYGGEVNRDSVVFQPPGDALEHFIIDGKP LKDILADIDW >gi|290782111|gb|ADGP01000005.1| GENE 28 27597 - 27842 266 81 aa, chain - ## HITS:1 COG:no KEGG:LCRIS_01215 NR:ns ## KEGG: LCRIS_01215 # Name: not_defined # Def: hypothetical protein # Organism: L.crispatus # Pathway: not_defined # 1 62 2 62 90 70 60.0 2e-11 MKVRYVGTTFGFGIDGLTNHKIYNCIAIESPFLRVIDDSGEDYLYSAINPGEFEGESEGH WEIINDNKNRDLFKLMNTNKK >gi|290782111|gb|ADGP01000005.1| GENE 29 27845 - 28936 666 363 aa, chain - ## HITS:1 COG:BH3531 KEGG:ns NR:ns ## COG: BH3531 COG5585 # Protein_GI_number: 15616093 # Func_class: T Signal transduction mechanisms # Function: NAD+--asparagine ADP-ribosyltransferase # Organism: Bacillus halodurans # 42 186 154 294 490 107 39.0 4e-23 MALYVEELAKSQNLNMRNLLSTVYEDSVYKTAYETQKLRGEFSTFREVAKRDIETAISKP WATDGKDFSTRIWENKAQLINTLQTEMTRSFMIGEGAAPLINRIQKRFNVSFSNARRLVE TETAYVQEKGMLDTYEALDVEQYQILAVLDMKTSDICRHLDKKVFDKKDAKPGITAPPFH CYCRSTTTPYIDGITDGTGDTRAARDPVTGKTVFVESDLSYEEWYNKYVVKGENKQTKPL ENAKIKEKKEESVQYKEGDKNIELNDIINEEVLINKRLKINGVEFIPNNTIVIPKKVIAG LGSDKVLKVAKTYAEKYGVSESGWSKVVGTVESKKYIFDVHWYHHKDVGNIRFKIKSKKE GNM >gi|290782111|gb|ADGP01000005.1| GENE 30 28997 - 29461 263 154 aa, chain - ## HITS:1 COG:no KEGG:Closa_4076 NR:ns ## KEGG: Closa_4076 # Name: not_defined # Def: Integrase catalytic region # Organism: C.saccharolyticum # Pathway: not_defined # 9 146 169 308 314 62 30.0 7e-09 MLNPGDTVYSRKRVLKIVKEKSTYETGKYLMELEEKMGFPIRMIQVDNGYEFVNDDDRTA KDSAFEKIAKVLHMELRRTGPYSPWQNGNVERSHREDVKILYGRKVVTSEQELIRQAAKH ESGYNKTAKTGLTFKNLNQVVSEYFSTCNLCVDN >gi|290782111|gb|ADGP01000005.1| GENE 31 29551 - 32004 3344 817 aa, chain - ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 8 814 6 810 830 905 58.0 0 MDEQHSDKVLPVCLENEMQTSYIDYAMSVIITRALPDVRDGLKPVHRRILYAMHEAGMTP NKPYKKSARIVGEVLGKYHPHGDRSVYDATVRLAQDFSTRYPLVDGHGNFGSVDGDSAAA MRYTEVRMAKITGEMLADIDKETVDFMPNYDGSLQEPTVLPSKIPNLLVNGSAGIAVGMA TNIPPHNLGEVVDGCVTLIDKPDASLEEIMTKIKGPDFPTGAKIMGREGILKAYATGRGS VKMRSCAAVEPMTKGKNRIVVTEIPYQVNKARVIESIAELTRNREIDGITALRDESDRKG LRIVIELRADVNPDIILNKLYKHTQLQETFGIIMLALVDGHPRVLSLLQVLQYYLGHQRQ VITRRCRFELDKALARAHILEGLLIALDHIDEVIRTIRESATDETAKTSLMTAFGLTDKQ AVAILDMRLRRLTGLEREKIEEEYRELEERIAYLRSVLADDRKVMEIVKTELLEAKKRFG DVRRTQLAADTSELGVEDMIPDERMVLTLTRRGYMKRINANVYHTQNKGGRGIKGMGTKD EDAVNHLLYTSALHTVLFFTNFGRVYRLKAYEIPEANSRNSKGIAAINILPLSTGEKVNA LIDLDQADPSMNLFMATENGLVKKTELAEFKNVRRNGLIAISLIEGDHLAKVRLTNGKQR IILATKLGMAICFNESDVRPMGRNTRGVRGISLAPGDRVIGADVLAPDCQVLTVSEEGFG KRNNMDAYKIQLRGGKGAKNFKITPKTGVIVGVEVVREDQELMLITTNGIVIRTDIESIG IKKGRNTSGVKIQKLEGDDKVAALDTITVDGEEREAE >gi|290782111|gb|ADGP01000005.1| GENE 32 32276 - 32998 804 240 aa, chain + ## HITS:1 COG:BS_yqiK KEGG:ns NR:ns ## COG: BS_yqiK COG0584 # Protein_GI_number: 16079474 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Bacillus subtilis # 4 234 5 237 239 201 39.0 1e-51 MLNFAHRGFSGKYPENTMLAFQKALESGADGIELDVQLTRDNRLVIIHDERVDRTTDGAG FVRDFTLSDIQQLNAAGTYADTLPPVSIPTFREYCHWVKQTDLLTNIELKNGVYDYPGIE AEVWQVLQEFQLQEQVIISSFNHASILRMKKLAPQLTYGLLTESWLINPGKYTRDLGVAC YHPLYGSLTDDTVAEIKRQGIRINTFTVNDEEAVRKLLKQGIDCVITNYPDMVRRIVQGG >gi|290782111|gb|ADGP01000005.1| GENE 33 33004 - 34368 759 454 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 443 3 441 456 296 37 2e-79 MDALEHLIVLINSYLWGKWLVYVLLSLGILYTLANGFIQIRYFPFIIKKTLIHSFQNRHE DKGNGSISTFKAMMVTLAGNVGGGNVVGVATAIVSGGMGAVFWMWFAAFFGMALKYGEIV LSQIHRGRDADGNILSGPMYYIRDGLKLPWLGIVIAVLMCIKMMGANLVQSNTISGILQS NYGISTTGTGIVLILCLLGITLGGLKRLANIAMNLVPIMSVFYVVIGLLVILLNIQTVPH VFEEIFRQAWSFHAAAGGAGGYAIFTAMQYGITRGMYSNEAGEGTAPFAHGSSIVPHPVD EGITGVTEVFVDTIVICTITALVIGVTGMNLTDKSATVMALESFGTVWAPLKHAGTFALL IFCFTTLMGQWWNAAKSFTYAFGPKVTEKVKYIFPILCIIGATAKINLVWSIQDLAMGLV IIPNMIALLVLFPKVREKTKEYFNNPQYYKDAKK >gi|290782111|gb|ADGP01000005.1| GENE 34 34489 - 34920 232 143 aa, chain + ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 12 107 2 97 119 65 36.0 2e-11 MSTPKPTAYTPIRYLWLLTGCISFILGTAGIVLPVLPTVPFYMLTLFCFSRSSPKLHARF CRTQLYRRHVESFVKNRTMPRRAKYRIVTVVTLLMLLGAFYMRTRIWGLIILGIVWISHI IYFFFILKTEPSAAGLAEKSRRL >gi|290782111|gb|ADGP01000005.1| GENE 35 35015 - 36469 1887 484 aa, chain - ## HITS:1 COG:HI0675 KEGG:ns NR:ns ## COG: HI0675 COG2195 # Protein_GI_number: 16272617 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Haemophilus influenzae # 13 482 14 481 484 227 31.0 4e-59 MIQNKEIIDGFLKEFAGLAKHPRPSHHEKEVSDYIVQRFRDLGIQDVVQDEVYNVIANVP AAAGCENWPLTLLQGHMDMVCVAKPGVAYDPLTSEIKLIVEDNILRADGTSLGADDGVAE AMIFYVLQQDVKHGPLRIIFTVDEEMGMTGAKHLDAAYVQDVKYVINCDSEDINIICVSS AGSVHTDFRRNIQWQAPHSSKAVKITLKGLRGGHSGETINEGKGNAVTGLAGILLQLQQG GIAYGLASIAGGTAPNAIPSQAEAVINVTADDVEKVRMIAEKAKQEFTAVYGDVEKNVQV TVTEVPIPSRVVADADAKAVVQLLTVLHVGVFAMNRTLPTLPDLSANIGSVQMKDNVLAV HYFPRASSDARLRELMRSLPVFAELTGFTVDIAEPAPAWNRKAESALLPLIAEEYERENG KAPKVEAIHGGLETGYFYALNPKLDIVSIGPATHDIHSPYESVELDSVASLTRILMRTLA KLKQ >gi|290782111|gb|ADGP01000005.1| GENE 36 36736 - 38808 2180 690 aa, chain + ## HITS:1 COG:Cj0204 KEGG:ns NR:ns ## COG: Cj0204 COG1297 # Protein_GI_number: 15791591 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 14 682 8 660 665 644 57.0 0 MNSPLKTAVNYPQLPELTVRGMLLGMLITIIFTASNVYLGLKVGLTFSSSIPAAVISMAI LRMFKDSNVLENNMVQTQASAAGTLSAIIFILPGLLMLGYWQGFPFWETLLLCACGGSLG VLFTIPLRRAMVVNSDLPYPEGLAAAEILKVGSESHTEAAQGQQKKATGMKDIVGGAALS GIFSLCANGFHVLSSEFSYWISLGKTSTTQLPIGFSMALLGAGYLIGIASGIAILVGMIL AWGIFVPYLTGIMTPDQGVTAAKFASSIWAHKVRFIGAGCIGIAAIWTLICLAKPVVDGI RMSIQSLRVNDTAEKRILHHTDLDMTPKSIGLVFLAIIIGLAITFYSFVSAFPLSAGLIA LYVIVGILVAVLMGFFVAAACGYMAGLIGTSASPISGIGILGIIVSSLVVLGLSTSFGVF DMAGGSQFATALAIFITSVIVSIAAISNDNLQDLKTGYVVGATPWKQQVALIIGSVIGAF AIAPVLNLLYQAYGFTGALPRATMDPGQALAAPQATLMTTIAQGIFSSTLDWNYILFGIG IGIVAIIVDQLLKRNTKALMLPPLAVGMGIYLPPTLEVPLVIGSLIGFFVNRSLRARAAR RSPGHETEDVDACTHRGVLFASGMIVGESIIGVIIAFIIVVSVTSGGSENPLALVGKDFA GTAEILGLIAFIAAIVIFIRYIFATKFKPE >gi|290782111|gb|ADGP01000005.1| GENE 37 39035 - 39862 508 275 aa, chain + ## HITS:1 COG:CAC2657 KEGG:ns NR:ns ## COG: CAC2657 COG1145 # Protein_GI_number: 15895915 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 8 254 5 246 249 67 22.0 4e-11 MTIDNVTAVYFSPTGNTEKMCTQIAQELAKKLRVPCRHINFTLPAARTRRHVFAGTSLVV FAMPTYAGRLPNKLVPFVQKNFQGLQSPAITLVTFGNRSADSALPELAQTLAQNGFYVIA GASLAAPHVFSPRIGNTRPDAADMRLQEDFIRALVNKLRPQLPLTEVPRPSLLSAPIAPY YTPLGIDGKPAKFLKAKPQTNLPACTRCLRCVNACPMGSINPEDPSQVPGICIKCHACIH ICPHHAKYFADTAFLSHVAMLEQNYTRRAKNHYYL >gi|290782111|gb|ADGP01000005.1| GENE 38 39853 - 40449 474 198 aa, chain - ## HITS:1 COG:BS_ywoA KEGG:ns NR:ns ## COG: BS_ywoA COG0671 # Protein_GI_number: 16080706 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Bacillus subtilis # 27 196 24 190 193 63 28.0 2e-10 MIHVAVMVIRILLQFHTYRRQWRRFWVLITRFGYILFVLYGLISWFRPRPAGMRIQRRET LLYCLFAVITGSVLSRLIGAVWRRPRPFMNGKKAWCAHKDNASFPSNHTMNSVAISCIFL ARGETAGMPLLIWSGVLAVSRVICRLHYVSDIIGGAFLGAGISHVLYHNKKIKKIIRYLL DRYEERIQVFFKDSSDYR >gi|290782111|gb|ADGP01000005.1| GENE 39 40654 - 41478 1017 274 aa, chain + ## HITS:1 COG:AF0231 KEGG:ns NR:ns ## COG: AF0231 COG0834 # Protein_GI_number: 11497847 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Archaeoglobus fulgidus # 28 255 29 263 264 147 37.0 2e-35 MNLKKATSLLAITLLSVGVLSGCGHTPQAQKDTTKPLQVCTNATFVPFEFKDDANATEYK GFEMDLLQAVSKEMGQPVALNNVPFAGIIPALQQGTMDLGASGITLSPERAEKVAFSAPF YESKLVLMVPASGSIHSIQDLKNKTVAVQMGTTAADYCDSKKLATKQFDHNSEVIMELQV GGSPAGILDKPVADYYLTKEGKGKFKIIDLPDAKGEYLAFAMNKNNPQLQKDIDAALLKL KKNGTFQKIYQKWFGTNCPNLPDSAAAALAQTAK >gi|290782111|gb|ADGP01000005.1| GENE 40 41596 - 42276 841 226 aa, chain + ## HITS:1 COG:AF0442 KEGG:ns NR:ns ## COG: AF0442 COG0603 # Protein_GI_number: 11498054 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Archaeoglobus fulgidus # 1 226 1 215 239 166 42.0 2e-41 MKCLVLLSGGIDSTTCLALGVKKYGASELLAVTAYYGQKHAKELQAARNVAAYYGVAHRE IDVSQAFTLSDCPLLAGRKGAIAHTSYSDQLAAKGGAGTLDTYVPFRNGLFLSFAAALAV SVHASCIYYGAHADDAAGRAYPDCTPEFEQAMATAIYEGSGKTCRLEAPLLQWNKAQVVR QGLQLHAPYHLTWSCYEGREKPCGLCGTCRDRAAAFAANGVPDPAL >gi|290782111|gb|ADGP01000005.1| GENE 41 42445 - 44190 1812 581 aa, chain + ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 2 470 1 473 473 456 50.0 1e-128 MLKKTKIVCTLGPGSESPAIIEKMILAGMNVARFNFSHGSHTEHQKRIETVRAAAQKLGI PVALMLDTKGPEIRLGRFQNGTVTLTAGKRFTLTSREIMGNETIASVNYKELPADVHVGD HILLSDGLVNLEIIDIENTEIHTKILNSGIMSDRKRVAVPGTAINLPAVSPADKEDIEFG ISMNMDLIAASFMQRSNDVVTIRKILETAGSSMKIISKIECRAAVQNIDEIIKMSDGIMV ARGDLGVEVPAEEVPTLQKTLIRKCRAAGKPVITATQMLESMCTNPRPTRAETGDVANAI LDGTDAVMLSGETANGQYPVEAVTTMARVAMYTENHSSFRPLSIDYTATTTTESIGKAVV KIATDLHAAAIIASTEHGSTAQMISKFRPHAPIIAVSPHTDIIRRLQLNWGVQAIQGDNA KDSDEVVANAIAAALKQGLIQTGDLVVLTAGVPVGQSGSTNMIRVQVVGDVLLRGMGIGK KSAVGKVCVATDITALKKHFHDGCILVLRTAEPDFIPYLKKARAIVAEEGGLTSEAAILA ITLGIPIVVGAKNASSILKNNDTVTVDSSRDTVFRGAANAR >gi|290782111|gb|ADGP01000005.1| GENE 42 44249 - 46324 2404 691 aa, chain - ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 687 1 686 690 550 42.0 1e-156 MVMKEYTSEQIRNVAVLSHDGAGKTAVVESLLLTCGEVAAVGVGKDNKHIMDYEPEEIKR NVTIQLGIAPCQWEGYKINFLDTPGYSEFCGEVRAALRAADGILLVVSAEAGVEMDTERA WDYGVELQLPRMVYVNKMDGEQADFFACLEKMRAVFGKSIMPLQIPLGEGKDFRGIIDVC KLIAWEWKEGVCEEIKVPPEYMAKARQVREMCMEAAAEGDDALLEKYLEGEELTLDELRH GLRQGMLTGRVCPVMCGSARYHIGTQELLRRIITYMPTGAQKVMTGEDAENGEAVLVHSH KAFSGFVFKTTVDPFAGKMSYVRIYSGSLQEGDRVYNVTRKCEEKLGKILTLIGKEAKPI GRAPAGDIVVLPKLDRTKTGDTLAAPEFPVYFEPVRFPQPLHSVALKAVKKGEEEKLVNA LVRIGEEDPTCRVEKSVEGKQIVVRCMGDIHLEHIMTKMERKYGVQAAQEALYIPYRETI KGTATAEGKHKKQSGGHGQYGHVVLTMEPSATGEEVEFADAIFGGAVPRQYIPAVAKGVE ETLHKGLLAGFPMIHVKVTLKDGSYHTVDSSEMAFKTAAALALKKGIPEAEPVLLEPIYT VHVVIPEEFMGDVMGDFSSRRGRILGMEPHRNRKGIIVVKAQVPLAEMAGYVTALRSMTQ GKGTFHLEFWDYEEVPKKITEQIIAARAEKN >gi|290782111|gb|ADGP01000005.1| GENE 43 46865 - 48472 986 535 aa, chain + ## HITS:1 COG:Cj1553c KEGG:ns NR:ns ## COG: Cj1553c COG0286 # Protein_GI_number: 15792861 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Campylobacter jejuni # 1 523 1 492 500 323 37.0 5e-88 MAKKKPATKALNIDNILFNCRDYLRAARNSGSFFEKRDMMLTLVFLRFIGEKYEDGIEAL RKTLIEQDLNPDDENIRAAFFEDATFADGTYNLPVEARWSTIINTPAPKLNVALDTALTR LEEEDPQLKGCFIKGTFTTRNLAANDIKKLVDEVNKISHKAFGEEKDLIGYVYEYFLKEF AVNATKEEGEFYTPHDVVKLMAAMIEPFEGTLYDPACGSGGMFIQSAELVKATQGNLNSI NIYGQEKEAATYRLAKMNLALRGISHNLGGTNDSSFTHDLHKGLYFNYIMANPPFNLKGW YDENLKNDARWADYGTPPESNANYAWILHILSHLKPSNGVAGFLLANGALNDSDTLEIRK KLIQNDKVEAIIVLPRELFITTDISVTLWILNQNKKGGKYHDRNLRNREHEILFMDLRTR TENAVKGENKKKVRLSAEQIQHAAAIYHTWQSEATDGNNYAAPELYRSVGMAEMESKDWA LTPSKYIEFIDHDLDIDYEKEMARIQAEMKDLLHEEKESQKMLEDAFRGIGYGIE >gi|290782111|gb|ADGP01000005.1| GENE 44 48459 - 48770 114 103 aa, chain + ## HITS:1 COG:no KEGG:Pedsa_1278 NR:ns ## KEGG: Pedsa_1278 # Name: not_defined # Def: hypothetical protein # Organism: P.saltans # Pathway: not_defined # 3 97 1 93 397 62 36.0 5e-09 MGLSRYKLGELIELVNEKNTDGKYDESYVRGVNNRKKLMPTKVNLIGRNLNKFQIVHPGL FVFNHRTSRNGSKFSIAYNDEKKQLFALRIMLFFECVIIAKIY >gi|290782111|gb|ADGP01000005.1| GENE 45 48941 - 49597 364 218 aa, chain + ## HITS:1 COG:no KEGG:Pedsa_1278 NR:ns ## KEGG: Pedsa_1278 # Name: not_defined # Def: hypothetical protein # Organism: P.saltans # Pathway: not_defined # 33 206 4 179 397 112 36.0 8e-24 MVANQRAYERGLEDLKLTCDAYIEDLRRRIPCEAIGPYIERHDVRNGPNGTKNVMGVSTT KEFREPTSKVNRNDLANYKVVKPRQISFVQTTHNEKVFCNALNTTDEDIVVTSVNEVFST NENKLLPEYLVMFFNRTEFDRYARYHSWGSARETFTWDDLVKVQIPIADMEVQRSIVDIY TVYKKRKAINEKLKAQIKAICPILIKGSIEEGSNTKEA >gi|290782111|gb|ADGP01000005.1| GENE 46 49601 - 52930 1792 1109 aa, chain + ## HITS:1 COG:XF2739 KEGG:ns NR:ns ## COG: XF2739 COG0610 # Protein_GI_number: 15839328 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 13 1106 20 1052 1058 391 28.0 1e-108 MAKLKKYNGHYCESEYEYAFIGFLEAEGWNYIPGNHINRISKRDVLIADDFKKFIAETNP ELTEDEVTQIFDNVRLVGAESDFATLHKVYGWMVYGIQFTPQDGFAKMIPLIDFENPEKN IFRVVNQFTVEYTNNGQKENRRPDVLLFVNGMPLCVVELKNPADAQATVYDAWEQINIRY WRDIPHLLHYCPLACISDGVKTRLGTVRAPYEHFYAWRRVNNDDKVSTLPFAETETMIKG VYSPARFLEIFRDYIYFQDSIYDSAEVEIVCRYPQFFAARLLKQSIVHSIATGNGKGGTY FGATGCGKTYTMAFLARQLALRCSDIPQIGSPTIILIVDREELQKQGAKLFTKSKEFLNL GDVSVVKNRAQLRQELGARQSGGFYICTIQKFCDREDDKIGLINTRQNIICFSDEAHRTQ LDHSKKIQFRKDADENMRAMVSKPYAKVLKEAFPQATFVGFTGTPIAETYQTFGDEIDRY TMDQAVADGLTVSIKYHPRIAKVLLDKNKVKEIEDYYKKCADDGTTYDDIEASKQAMSSM EVILAEPSRLERLASDIHDHYLASCSNDPGRIQKAMIVCSSRRIAYDLLLKFKAKYPEWF EEKKTPADVAISAEALKELTPLPFIAMVSSVGSNDEAEMYNYLGGVKNDKRSEKLDAAFK QENSNFRIAIIVDMWITGFDVPSLTYLYNDKPLKKHLLIQTISRVNRKYPGKNYGMVIDY IGIRNNMREAMKVYGGNTSVAPTADDVEQATSEFKEKLEILKTLFTDYDLAPFLNPECDP VERYKLLSKAAEYVFTSIQVLQTEGNGKTAQVSFKTYFLKTVKRMRSAYDICQPSGNLDE KESSLAQCFMAIAGFVRKMSGTGDVDTDTMNRTVSKMVEEALKYNQVESVLESGEEEDIF SPEYFEKLSDVKMPATKLELLVKMLHKQIREYSKVNQLASKTFQEMLEATIAEYHERRKH LTAEEAGATQEAASEDIIKAATEQALVILRKMNENRESFRKIGLTFEEKAFYDILIALRD KYKFEYGSDKEVDGVVLNDKCKILAKKVKEIIDTKSSFADWLNNLNVRNQLKLDIKICLV KNGYPPQYSPEVFNKVMEQVENFEEHAGE >gi|290782111|gb|ADGP01000005.1| GENE 47 53209 - 54576 1788 455 aa, chain + ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 9 454 11 465 465 432 45.0 1e-121 MKAFDREHSVWQRFTPEQRQEVLAYGTNYRQFLDTARTERLANKEILRQARAAGFKPLTD YTALQKGDKVYWDQKGKSVILAVIGEQPPEEGLKIVGSHIDCPRLDLKAMPVVEKDNIVY FKTHYYGGILKYQWVCLPLSLLGVVYTATGEKIEVSIGDDPEDPVLYITDLLPHLGKDQA VKKLNEAITGEMLMPIIGLHSDTSEVKPAILQFLQDKYGIEEEDFASAELEIVPAQKSRE VGLDRSMIMAHGQDDRVCSYANLAAILQAKSAHKTQVALFADKEEIGSMGNTGVQASYFL DFMAELLALRGHTEDIYLRRLLRKSEVLSADVCAALDPNFESAFEKNNAGKFGYGIALCK YTGSRGKAGSSDANGEFLIKVRTIFNENKVPWQISELGKVDQGGGGTIAYIMANWGCEVV DCGVAMLSMHAPLELVAKTDAYCAYLAYKAFFESR >gi|290782111|gb|ADGP01000005.1| GENE 48 54743 - 55633 899 296 aa, chain + ## HITS:1 COG:lin0768 KEGG:ns NR:ns ## COG: lin0768 COG1597 # Protein_GI_number: 16799842 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Listeria innocua # 1 296 1 295 309 266 46.0 2e-71 MNRCLLIVNPSSGRERAKYHKQNLKNRLETMFDYVELRETRQSGDATDWAAEACVSGFDS LFCMGGDGTLNETVNGLAHAKRPIPFGFIPLGTINDLARALHIPLHPEEAIALLPRCKPV PVDIGRANDRYFINTIAAGVLPHAVGHVSIEQKTRLGPLAYFLTGIKAFQTHAPSLFKIE TENEELIYRSPLVVAMLTNSVGGFRNIAPRAKVDDGKIWLSVFKDFTYLDVLKMVPEFLS GTQLSGEYMTLMTLTRARITLLDDTPLTTNMDGDEGPSFPLDLEVLPSFLSVYIPQ >gi|290782111|gb|ADGP01000005.1| GENE 49 55698 - 57017 2097 439 aa, chain - ## HITS:1 COG:YPO3954 KEGG:ns NR:ns ## COG: YPO3954 COG2610 # Protein_GI_number: 16124082 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Yersinia pestis # 1 438 1 438 438 442 58.0 1e-124 MPLFILAIGIIVLFFLIVKVKLNSFLALLIVAGFVGLAEGLPIVKLIPTIEKGLGGTLGG LAIVVSFGAILGKLMAESGGAQRIAMTLIRLFGAKNVKWAVCLTGFIVGIALFYEIGFVL LIPIVFTIAAAAGVPLLEAGIPMAAALSVTHGFLPPHPGPTAISVIYNADIGKTLIYGLI IAVPTAIVAGPLFYKTITHIKAEMPEHLFKPKVFTEEEMPGFAVSIITALIPVVLMALSA VTKMTLPPETVAYQVLTFLGTPDIALTISIIVAFYTFGIQRGKTMKEVMTTAQDAILAVA MILLIVGGGGALKQILIDSGVGTYIGTIASHSGLSPLLLAWFVAAVIRISCGSATVAALT AGGIAAPVVAVTGVSPELMVLATGAGSLIFSPPNDPGFWLFKEFFGLTVKNTMRTWCVLE TIISVMGLVGVLLISLVIS >gi|290782111|gb|ADGP01000005.1| GENE 50 57282 - 58184 689 300 aa, chain + ## HITS:1 COG:CAC3242 KEGG:ns NR:ns ## COG: CAC3242 COG1313 # Protein_GI_number: 15896487 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins # Organism: Clostridium acetobutylicum # 5 295 7 294 298 259 45.0 6e-69 MPYICNDCPRHCRVARSTTPLPGKQLPGYCHCPSEPLAARAALHYWEEPCISGTRGSGTI FFTGCNLRCCFCQNSRISQDGYGFPVSPLQLRHIYQTLIRQGAHNINLVTPTPYKKAILD SLQTPLPVPVVYNCGGYESVETIHELKGKIQIYIPDFKYMDTQAAARYSDAENYPEIAQQ AILAMYEQVGAYQADSRGILQKGVIIRHLVLPGLLKNTYAVIDWVRKTFAPKQVLFSLMR QYVPCGQAARYPEINRPLSAREYKKAEQYLFDSGIEDGFVQEKASADKNFIPLFDGTGII >gi|290782111|gb|ADGP01000005.1| GENE 51 58273 - 59205 1130 310 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 11 302 7 295 301 74 23.0 3e-13 MAVSLILLVAIIKLFLILLMGFCLIKTRKLTPAAGHVLSVLLVYIILPCVIIHSFQLHAS PAVEKGLFFAFIAAVGVHIIFILFTAVLRKPLQLQVVEQASLIYTNAGILVFPLVTEILG PQYVIYPCTYMAVQLLLLWTHGSYLMSGSGAINIRGIITNINIIAIVIGAILFLMKIHIP AVIDDTMNMVGSTIGPVGMLITGIAIAEKNIKTVFLNLRNYKQALWRLLVYPAVLIVIFA AAHATSYVPDGKHILMTVFIASITPAAAVVTSLAEFYRQDAPYAAELCVVSTVLALVTMP CMLFIFDTVV >gi|290782111|gb|ADGP01000005.1| GENE 52 59236 - 60213 1008 325 aa, chain - ## HITS:1 COG:AF0534 KEGG:ns NR:ns ## COG: AF0534 COG0491 # Protein_GI_number: 11498145 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Archaeoglobus fulgidus # 1 324 1 315 319 201 35.0 2e-51 MIEKLHAKPDIYRIEVTLPHNPLQYLNSYVIKGKTRNLVIDTGFNLPICRSDLCGGLQAL QVDLRRTDLFLTHLHADHTGLVHLFSQAGCPIYMQGDDYDFLAAAESGEVWRNAEERFMR EGMPATDIQTQFSNYARAYSPRVDFRVHRVHHGQRLRLADEELYVIHTPGHTKGQCCLYL PQQEILFTSDHILFDITPNIQIWSNMSNALEEYLKSLQALRDLPVAAALPGHRKGRSSIK ERIQELRRHHGQRLEEVMRLIRLYPGSTAFDIAGQMAWSMRGLSWSAFPPTQKWFALGEA LAHIEYLVQHGEIRKIKDSRQYRYE >gi|290782111|gb|ADGP01000005.1| GENE 53 60326 - 60892 535 188 aa, chain - ## HITS:1 COG:BS_spoVC KEGG:ns NR:ns ## COG: BS_spoVC COG0193 # Protein_GI_number: 16077121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Bacillus subtilis # 1 184 3 187 188 172 46.0 3e-43 MIVGLGNPGREYENTKHNTGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKPQ TYMNDSGRAVGPLMRWYKLAEPQVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFANGC TEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMNR FNPKKKRE >gi|290782111|gb|ADGP01000005.1| GENE 54 60911 - 61876 1342 321 aa, chain - ## HITS:1 COG:BS_prs KEGG:ns NR:ns ## COG: BS_prs COG0462 # Protein_GI_number: 16077119 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Bacillus subtilis # 1 319 1 316 317 388 62.0 1e-108 MSNEDGKKLKIFTGNANPQLAKEIADCLDLELGKAFVGKFNNGEIQVMIDESVRGKDVFV IQPTCQPANDTLMELLIMADALKRASAKHITAVVPYYGYARQDRKTRGREPITSKLVADL MTTAGITRLVTMDLHAGQIQGFFDVPVDHLGSASIMAKYLQQKVEAHELENIVVVSPDLG GVTRARDLADRLNAPIAIIEKRRPRPGVAEVMNVIGDIKGKTCIIIDDIVDTAGSLCGGA KALKELGASCVIAACAHAVLTDPAVERIKNSVISELIITNTIPLPEDKKIDKIKVLSVAP LLGEAITRIFREVSVSELFDK >gi|290782111|gb|ADGP01000005.1| GENE 55 61951 - 63324 1518 457 aa, chain - ## HITS:1 COG:BH0065 KEGG:ns NR:ns ## COG: BH0065 COG1207 # Protein_GI_number: 15612628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Bacillus halodurans # 1 452 1 452 455 469 53.0 1e-132 MNKIVALILAAGKGTRMKSKLPKVLHKVGGVPMVGHVLQAVKEAGTERQIVVTGFGGEAV VSYLAQQAETVVQTEQLGTGHAVLQAESLLPNTTGVLLVTCGDTPLIQASTFRRLLAYHE ETQAAATILTTNMPDPTGYGRIIRNVDGQVIKIVEQKDGLSEELAVTEVNAGIYCFNLPM LWPLLHTITNHNAQGEYYLTDVISLLVASGAKVGAFAAADYEETMGVNSRIQLAQAEKVL RRRTLQRLMENGVTVIDPDTTYVDAGVRIGPDTVLYPGTVLEGETRIGENCQVGPYVRLT NVHMGNDNHLQFTYAHDCEIGNACEVGPFAHFRPQTVIGNHVKVGNYMEVKNSHIGDGAK LPHLSYIGDSDVGANVNIGCGTITVNFDGRVKHRTVIGEHAFVGCNSNLVAPVNVGAYAF VAAGSTITEDVPPKALSIGRKRQKNITAWVTEATYKK >gi|290782111|gb|ADGP01000005.1| GENE 56 63494 - 64006 493 170 aa, chain - ## HITS:1 COG:BH3322_2 KEGG:ns NR:ns ## COG: BH3322_2 COG3584 # Protein_GI_number: 15615884 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 85 170 21 110 111 86 51.0 3e-17 MEMGMSGAAVQRLQYMLIDAGYLSDGADGVFGAATRDAVTRFQAAKGLDADGVVGTRTLT ALAETGKKKTNNSAQNIWGKRRMIMHATAYSAQDPGNTGITARGHRLKRGIVSVDPSIIP LGTKLYIEGYGYAVADDTGGAIVGKRIDLGMDSNREALRFGRRNVVVHVL >gi|290782111|gb|ADGP01000005.1| GENE 57 64114 - 64320 65 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967814|ref|ZP_06559367.1| ## NR: gi|290967814|ref|ZP_06559367.1| hypothetical protein HMPREF0889_1488 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1488 [Megasphaera genomosp. type_1 str. 28L] # 1 68 1 68 68 84 100.0 3e-15 MIIDISKCYKSDYTKDRRISQNFGFLCVYFYVFIPLSISFEAICSAYFQYFILFYYDQLL FFIIIMHF >gi|290782111|gb|ADGP01000005.1| GENE 58 64307 - 65890 1886 527 aa, chain - ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 22 519 14 509 512 294 36.0 3e-79 MQVNKQLISAIEVLSHWPRFRLRLFLEGIFVGIASGSIISLFRFLLEHGTIYREYLYAHV LINGSLGINVVWFMGLLGAAGLLWRLGVYEPNAGGSGIPQVKGVILGAVRMRWFRILWVK LVSGIVGIGLGLSLGREGPSIQIGAVAAQGLSRGLRRTRMEERYLITAGASAGLAAAFNA PLAGVVFALEELHRNFSGAVLAPAMAAALLSTAVCRLVFGRETIFHFGTLPVLPLSYIWI AVILGVIIGIGGRIFNACLLNTHLFYELPIFRNGYMRIAFALCTAGVLGYVFPQVLGGGN ELINQLHAMPLSLQLFVALLAVKLLFTLVSYGCGVPGGFFLPMLVLGALMGGVTGIIFIH FGIISSYYFSNIIVISMAAFFAASVQSPITGTILIMEMTGSYEHLLVLCTASMVALVVSQ VLKGEPIYDTLLHRSLAKSKPEIPPSERRNLMELTVASGSPVDGKYIRRIAWPKHVVLID IKRSSGEVLPDFDTRLYAGDYIYVLTDSVEAAENIRNLVELSEPKNA >gi|290782111|gb|ADGP01000005.1| GENE 59 66044 - 67234 628 396 aa, chain + ## HITS:1 COG:FN0590 KEGG:ns NR:ns ## COG: FN0590 COG1473 # Protein_GI_number: 19703925 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 11 354 5 353 393 145 30.0 1e-34 MNPPNSIPFSISEAVRQMLPYIMEMREYFHAHPEPGGREFDTCKTVFQELSLMGVQEVKI IAGTGVTGLIHGALPGPLLLLRAAIDAQRIKETHPCAYASLTEGLMHAAGHDGETAVLLG IAKILCKHRQTVQGTVRLVFEPAVSATGKAAEMIDAGILHAPRPDMALTCHWNGNLPLET VAFRAGHISPCGDEITLTVKREPTALAPSLNPLWVGTRLVCKIYDTLAAHRQLPADTLIF NQVDGGTSPAILPESVTWKGILRTPSPTVRQHILQRMETLCRDGEQSPLLSVRLLNRPLA PPLENTPLLCKLAHKIWHTHAPHLRVSAAMDSRRLDDFSYIAARIPAFTFDAGIYTRTPM PIDSRLFIWDSDILKSLCLTQLTLVLHLPRYFHDRK >gi|290782111|gb|ADGP01000005.1| GENE 60 67474 - 68067 757 197 aa, chain - ## HITS:1 COG:MA2362 KEGG:ns NR:ns ## COG: MA2362 COG4717 # Protein_GI_number: 20091195 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 8 166 1127 1284 1300 88 31.0 8e-18 MAKNEESSRILQKRQIRQAELDQQVDRWLVYMFAEYMLGEAQAYYERVRQPLVIRQAGTY LQRMTAGRYTLQASFDGKQLYAVDESQHRIPEKQWSSGLGDQIYLAIRISLAAAFSKQLE PMPIILDDILVRFDEERQKEALRFLAEMGEKEQIFLFTCSQATKELALAVQREDTPKNTP IQLFEIEKGRIQSAVCE >gi|290782111|gb|ADGP01000005.1| GENE 61 68115 - 70454 2270 779 aa, chain - ## HITS:1 COG:MA2362 KEGG:ns NR:ns ## COG: MA2362 COG4717 # Protein_GI_number: 20091195 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 280 10 302 1300 77 24.0 8e-14 MKIIQMNLDDFGIYHNVEWQPPEKGLIVMHGRNESGKTTLMKYVRSMFFGYGRGEWRGFF GHMDIRRHNGREYRIYRNEKESYICDREEILHEEPANLWWHGLDRQTYDKIFAIGLEDLQ GFKILSNEEVRSHFFSIEGGVRMGVTRRDISRLMGELLVASPQGKKPINVLLQEQKEFSH KIQQLSYDEEEFAQLQEWEAKTHTTENRLRLEREETRLQMEKAALSIAAWEVYRREQEAL KKMRELADVAQFSQLEAEQWQAREKEIKRLQEEEAQLREQCKKEPAYCPEWKRWEIGADK LEEIYSHTAEWRQQCEELRQQEEADRIRRQSLKKVIALLQPWTGDTIAAAVPWEEAAALY KKYEQGRHEWETWQAGKPKALQQVKACGNVAADADTEESWKKRDEAVSALQDIIREREKI QVQMTCLQGIPATSGKAVLWAGAVWSIVTIALAGSSMAGVFHFSPAIYGAAIAAVLCFLQ YGRKRRGPKAADLQLALAGLEGRMAVLRKEAAVDLAVTASNEQWRQALDEIRTAYVYWRT KASKNEWEKEQQAMYAALVEKWRQEGAAIKTRLADSEKSWEQWCGTYGFVALPVHKRQEA EQAWKTWRRLVTEQQEWQIKKQEIQQRLRHWQDETEQLFREIGIQQEASFTGAVAAYKQW QEIHVQGEVAREQDRQLALQREQLIQLQKKLQEQEAQQEQVLLRAGVKTEGEFRSKVLKY KQFCQYKEVYEQSEAHLRLLAKTPQILKELRHELQVHTMKNWTEEKAYYERKIKEIEKK >gi|290782111|gb|ADGP01000005.1| GENE 62 70460 - 71725 1390 421 aa, chain - ## HITS:1 COG:MA2363 KEGG:ns NR:ns ## COG: MA2363 COG0420 # Protein_GI_number: 20091196 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Methanosarcina acetivorans str.C2A # 4 368 21 394 443 246 38.0 6e-65 MSESLRFIQCGDLHLGSPFHDLAFVDERWRRSIGQAPVRAFQKIVQLAIEKNVHAVLITG DVYTSREHNLTAQLDYVRLLHKLAQHGIQVFAVLGNHDPQDAWQAKIPLPANVHVFGTEK AERVPLCVDGEEVAAIYGQSYAKAEQRENLARNFRRSAADKYAIGLLHTQVGGTHSAYAP CTIQDLKESGMDYWALGHVHKRQILQEQPYIVYAGNPQGLDCTEIGPRGCYYVEVGPYGT ATLTFLDTSIVRWEQADISLDGLESVSELRESVRFTKEKIRKEIGKPTFLDIHFIGSGSL YHVINNSEATQYWLEGWREEERGKYAFVMVERLRNLARPKINPAERSQLPDTVGDYLNIA AQLEALDEEEKIKALRQIFLQRGEADRLGNYGRDISAARLSEAFEKAKWLGMQRLMEDRK G >gi|290782111|gb|ADGP01000005.1| GENE 63 71718 - 73121 1342 467 aa, chain - ## HITS:1 COG:BH0578 KEGG:ns NR:ns ## COG: BH0578 COG1167 # Protein_GI_number: 15613141 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus halodurans # 1 459 1 468 469 293 36.0 4e-79 MLQIDKQAGGPYYVQIYEYFRCEIEQGRLTAGVRLPSVRELAERIQVSKMTVEKAYRQLA AEGYILRHHKARYEVTYLERAVSHKLTVVNPGQAQWQKKTYLYDFGSGDMDMEGFPLGLW RKYMNRVLADPVYLAACDDEQGVPALRAALSKYIYETRGVQARPEHIVIAAGTTALLRIL TTILKAEYSEIAVENPGFRLGREVFRSAGYTIFPVSVERGILDIDALQHSRAQVLYISPS HQFPTGAVMMADVRHRLIAWIKERKGIIIEDDYDSELRYYGRPVPALQGLDGGEHVVYMG SLSKILPFFVRVSYMVLPARLWQVYQEHISLFRQGASVPEQCVLATYISTGELNRQVRRL RKSYQVKGNQLEGLLRRAFGDAVHVRPVVSGVYCHVHIRSSRSTRELVEAAAQQGCRVLP VQLFYETPAVEDKREFLLSFTKIPASRLFDAVQALYQAWNERGNNHV >gi|290782111|gb|ADGP01000005.1| GENE 64 73312 - 74304 813 330 aa, chain + ## HITS:1 COG:CAC0210 KEGG:ns NR:ns ## COG: CAC0210 COG0502 # Protein_GI_number: 15893503 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 3 322 5 325 328 291 43.0 1e-78 MNFQHLLSYTQKTLAGQSVSPEEAYELITLPAADTPLLLAMADKIRRHFHDDTVDCCAII NGRSGKCPENCRFCAQSAHYQTGVTEYPLVDTDTVIAAARRAKAAGAARFAIVTSGRSVA EGEEFESVLHALSCIKKEVHMETCCSLGLITLRQAQALKKVGISRYHANIETAPSFFSSI CTTHTFADKAVMIRTAQQAGLRVCSGGIFGLGETPRQRIEMAFTLKKFGIDSVPLNILNP VAGTPFARNKRLPPWEILRTFAVFRYILPHALIRTAGGREVNLRALQPYALTGGLNGIMI GGYLTTGGNATSTDQQMLRDLERPCTQPEV >gi|290782111|gb|ADGP01000005.1| GENE 65 74289 - 75593 1173 434 aa, chain - ## HITS:1 COG:SPAC24H6.04 KEGG:ns NR:ns ## COG: SPAC24H6.04 COG5026 # Protein_GI_number: 19113860 # Func_class: G Carbohydrate transport and metabolism # Function: Hexokinase # Organism: Schizosaccharomyces pombe # 23 421 45 466 484 97 24.0 4e-20 MEFRSPEDWKKIAQHFYYTDIQLQRVVQRFSGHLSLAVHNQNNRLPFSKSYLPLPTGREN GVFLAVEFDGNKVRVFRVRLWGRRGYVIEKKISQTLSVAPCTEGSPEPLITDAVLDCVAA LIGTVAGGNYAYLLGHTFSFSVHYERSGDWRWRHWARKIGGRKKAGRAINARLYQALTRQ GLENIRPAAILDDAAATLLSAAYTYDNTRVAVICGHGFDIGYFEPLLKMILTVHAGDYNE VERTSWDWEVDATSGNPGRNLFGKMVSSAYLSKIYQRTLCSYFDTETIPSFSTRAMNEVI SMEYSRNGRMDMSRMWDRIILPDDVNPLRSIGAAIFVRAAQLAGAAAWGILRHLYGNADV PAQNVAVAGGIMGRVRGSLGMMEDVFRVCGEEPATCGQESGVVPQLIQDGAAVGAAVAAA LSQSAAGAQYQTSG >gi|290782111|gb|ADGP01000005.1| GENE 66 75847 - 76041 327 64 aa, chain + ## HITS:1 COG:Cj1047c KEGG:ns NR:ns ## COG: Cj1047c COG2104 # Protein_GI_number: 15792374 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Campylobacter jejuni # 2 64 1 63 63 58 42.0 2e-09 MIIINGEAIPAETLSLTDYLTTHGLRPERIAIERNGEIIPRKTYDRVTLVDGDKLEIVHF VGGG >gi|290782111|gb|ADGP01000005.1| GENE 67 76095 - 76865 995 256 aa, chain + ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 5 254 3 253 257 336 71.0 3e-92 MKANDTFHLGGHDFSSRFILGSGKYSVKLIEAAVKEAGAEIVTMALRRAEAGNKDNILDF IPQGTTLLPNTSGARTAEEAVRIARLSRELGCGDFIKIEIMKDSKYLLPDNAETVKATDI LAKEGFVVLPYVTPDLYTARDLVCAGAAAVMPLAAPIGTNKGLCTKEFIQILINEIDLPI IVDAGIGRPSQACEAMEMGAAAIMANTALATAGDLQLMARAFKKAIEAGRAAYLSGPGQV RETASASDPLTGFLGD >gi|290782111|gb|ADGP01000005.1| GENE 68 76880 - 78043 979 387 aa, chain + ## HITS:1 COG:Cj1044c KEGG:ns NR:ns ## COG: Cj1044c COG1060 # Protein_GI_number: 15792371 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Campylobacter jejuni # 7 387 3 380 381 457 57.0 1e-128 MNTERTDHMKYLPQMEVLDSHMLDDVLKYRDAFQDTDFTATDVKNALRKPGLTPHDFMAL LSTAAQPFLEEMAQKAHIVTRRHFGNSISIFTPVYFANYCENHCIYCGFNSHNKIKRARL NDEELHQECQNIAAEGFEEVLMLTGESPHMSDVHYIGNAVKIARQYFRQVGLEIYPVNTD DYAYLHQCGVDYVTVFQETYNADKYETLHLAGNKRVFPYRFYAQERALRGGMRGVGFAAL LGLDDYQKDAVSTGIHAWLMQKKYPHAEISLSCPRLRPIINNDKINPKDVDERKLTQILC AYRLFLPFASIVVSSRENAHYRNNIVKIMATKVSAGVCVGIGGHLKADHSEVGDEQFEIS DNRSFSEMYSTIKKMGLQPVTSEYIYV >gi|290782111|gb|ADGP01000005.1| GENE 69 78286 - 78891 341 201 aa, chain + ## HITS:1 COG:Cj1043c KEGG:ns NR:ns ## COG: Cj1043c COG0352 # Protein_GI_number: 15792370 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Campylobacter jejuni # 3 195 5 197 201 136 34.0 3e-32 MLKIIAITNHDLVSTNYWERLEQIATAPIDAVVLREKNLTEDEYAEYARRMLKLCNLHDQ TCILHNFGKAAVRLHVPRFQCSLKYLEDHSSLLYYMTTLGVSVHTVKEAVRAEELGATYI IAGHIFPTACKKTEPPVGVDILKEICQAVSVPVYALGGVNTTTITQLRNIPIAGIALMSG IMTCKNVTDYIAELKNKYVGK >gi|290782111|gb|ADGP01000005.1| GENE 70 78894 - 79397 415 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967827|ref|ZP_06559380.1| ## NR: gi|290967827|ref|ZP_06559380.1| hypothetical protein HMPREF0889_1500 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1500 [Megasphaera genomosp. type_1 str. 28L] # 10 167 1 158 158 268 100.0 1e-70 MPQAYLLFNMQRHILSSRTDAPSLLQTIEKAIVAEKRNPTIATDLFFIHHIPQYIASSEA DTLYQTTYGIHPSLLPYSLLSSTIYTGTVGCPDLLVEMKEYSRIICMGLFLDTHILMNSL ALKTQFPQKEICILDKGCASTVPQIQKPTYEILSACHITIFSTTSST >gi|290782111|gb|ADGP01000005.1| GENE 71 79444 - 80043 682 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967828|ref|ZP_06559381.1| ## NR: gi|290967828|ref|ZP_06559381.1| hypothetical protein HMPREF0889_1501 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1501 [Megasphaera genomosp. type_1 str. 28L] # 1 199 1 199 199 345 100.0 8e-94 MQYYGDLLRRLQKESTTGVGMYFVKKCLLRIKQSRLSENETRFFMMCAVSANDGLQKFLE QQQWEHTGFWQQRLYFSRVKSQVPMAVKAYISCLLVLLGSQKKLLLKKLQLSEAEMLQKW EYLFYYEAADKVHFNRFMQAVTEKDGLLHVFTTLGEVLFTQLQGKCLGPPVSLTANGELA QRLVSEDAYIVTCRLKEMK >gi|290782111|gb|ADGP01000005.1| GENE 72 80058 - 81497 1879 479 aa, chain - ## HITS:1 COG:no KEGG:PTH_0853 NR:ns ## KEGG: PTH_0853 # Name: not_defined # Def: hypothetical protein # Organism: P.thermopropionicum # Pathway: not_defined # 8 453 5 449 465 559 64.0 1e-157 MFGPMCERQAGEIQPGIKLPLFNLVFRLPFVHYRFEWPDYVQGLLLCAVCLGIIPVLQEY LGMPFEIAITIVIMNGFLYTWHAHLGDPVVPGWITPAIPLLLLWLSGYPHDTAARMHALI AFEFELGLLTFFLGATGLAKRVVELVPDALKSGILIGAGIAAVRLVFNAGGSFDKYPLTI AVAVGFAFYCSFSNHFKGLMHKNRVFRLISDLGLLPAMVLAVIVAPLVGELPWPSIEWGF THPHFIEVFTQWSPFAERIGFPGISYFISAAPLVVATYVVLFGELIQADALIDEAREFRH GDENIHFDANRNNVIVGARNMVMAMAGPDLSMCGPLWAAMQVVICERYKHGREAMDSLIG GVASFRLGTFTGYWLSPIVSFVKPVLPIALALTMLIQGYVAVRVGVLRAKTFNDLGVAGI IGGVLVSRGAAMALGVGIVLCLIIYGRHFFKRRLSLYNTTADPLFNLAATKEVEDKTQA >gi|290782111|gb|ADGP01000005.1| GENE 73 81560 - 82864 1539 434 aa, chain - ## HITS:1 COG:FN0621 KEGG:ns NR:ns ## COG: FN0621 COG0427 # Protein_GI_number: 19703956 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Fusobacterium nucleatum # 1 430 1 431 434 488 56.0 1e-137 MKDWRTKYASKIVSPAEAVSHVKSGDKIVFSHACGEAQVLTEELVNQAERLHDVEIIHMV AMGPARYCLPEMAGHFRHNALFVGATTRKAVEEGRADYTPCFFHEAPGLFREGIIPVDVV FLQVSEPDENGNCSLGISVDYTQAAAGVAKLKIAQINKNMPYTYGNGIHLDELDYIVEKD EPLIELQPPKIGEIEQCIGEHVASLIKDGDTLQLGIGAIPDAVLSFLGDKKDLGIHSEMF SDGVVDLARKGVITNRRKNIDTGKFLSCFLMGTKKLYDFIDHNPEVWIKPVDYTNDPFVI AQIENIVAINSAMQVDLMGQVNAEMIGRRQFSGVGGQVDFVRGTSRAKGGRAIIAMPSTT GKTKKISKIVAMLDAGAAVTTSRNDVDYIVTEYGIAALKGKTLRQRAEALIAIAHPDFRE ELKADFAKMFPVSV >gi|290782111|gb|ADGP01000005.1| GENE 74 82956 - 84407 1736 483 aa, chain - ## HITS:1 COG:AF0333 KEGG:ns NR:ns ## COG: AF0333 COG2368 # Protein_GI_number: 11497945 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Archaeoglobus fulgidus # 2 481 3 479 500 594 58.0 1e-169 MALMTGEQYVESMRKLKMQVYMFGKKIDNPVDDPILRPSLNSVKMTYDLAQLPEYQDLMT VVSPYTGQRVNRFTHIHQSTQDLMNKVKMQRLLGQKTAACFQRCVGMDAFNAVFSTTYDI DKKYGTSYHQNFMNFLKRVQENDLTVDGAMTDPKGDRGLAPHAQADPDLFLHVVEQRPDG IVVRGAKAHQTGFINSHEVIVMPTMSMGEEDKEYAVSFSCPTDAEGIFMIVGRQSCDTRK LEGAAMDTGNPTFGGMEALVIFDNVFIPNEQIYLNGEFEYAGVLVERFAGYHRQSYGGCK VGVGDVLIGAAAVAADYNGCPKASHVKDKLIEMQHLNETLFACGIACSALGTKTESGNYL IDLLLANVCKQNVTRFPYEIVRLAEDIAGGLMVTAPSEKDLRDPKLGPYVDKYLRGVASI STENRLKILRLIENLSLGTAAVGYRTESMHGAGSPQAQRIMISRQGNLRMKKALAKEIAH IEE >gi|290782111|gb|ADGP01000005.1| GENE 75 84815 - 85099 475 94 aa, chain + ## HITS:1 COG:BH3419 KEGG:ns NR:ns ## COG: BH3419 COG0694 # Protein_GI_number: 15615981 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Bacillus halodurans # 4 72 8 75 79 57 39.0 9e-09 MTTHAQLETLLAEKIRPSLQAHGGNVEIISYTDGILRIRLTGRCSGCPSATLTTEEFINQ IVQTAFPDVREVRLAAGVSEALLAEAKAFLRRSP >gi|290782111|gb|ADGP01000005.1| GENE 76 85175 - 85768 454 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967834|ref|ZP_06559387.1| ## NR: gi|290967834|ref|ZP_06559387.1| hypothetical protein HMPREF0889_1507 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1507 [Megasphaera genomosp. type_1 str. 28L] # 1 197 24 220 220 384 100.0 1e-105 MIKKWPNYTYSYTPETEFCDHCFIICGCPVACPETAALRTATWEKITSPRQLESAVSRLE KKTNIPPPTADALRPGQTCSVHRTYTLLHWQQMIRFLGLTSTGAYMHQGRPIVPEPLLTA PIALLLQKMNPVSWKILNTSFTFLGTAPIQEPLYCTLTVKEKQEINRVPHYVFTYTVTDT ARKNFLTGTVYGKINET >gi|290782111|gb|ADGP01000005.1| GENE 77 85792 - 86028 380 78 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2192 NR:ns ## KEGG: bpr_I2192 # Name: not_defined # Def: acyl carrier protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 78 1 78 78 84 53.0 2e-15 MTNKEIYIKLFVTNFKLKPEELPGLKYRSIKAWDSLGHMTLMEDMEEAFDISIDTPDVLA FSSFEKGMDILRKYGVDI >gi|290782111|gb|ADGP01000005.1| GENE 78 86031 - 86702 591 223 aa, chain + ## HITS:1 COG:L128550 KEGG:ns NR:ns ## COG: L128550 COG0491 # Protein_GI_number: 15672524 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Lactococcus lactis # 8 220 3 206 210 64 26.0 1e-10 MDRLPNYITVLTDDLTTSNCYILTAQNHALVIDPNNAAAIQDFLETRHLQLDYIFLTHEH CDHISGLNALRKAVPCTVFAGAACSEGIQNTKRNMSRFMDTYLYFRTHQLPSRPYPAFTC QAADRTFARTAVMTWQTHSFLCRTAPGHTPGSSYFILNNAILFSGDYFIPGEEVITRLPG GDPEAYEREGKAILKTIPTPLLTCPGHGAPFLLTEEIKNDYGL >gi|290782111|gb|ADGP01000005.1| GENE 79 86686 - 87753 917 355 aa, chain + ## HITS:1 COG:no KEGG:PANA_2272 NR:ns ## KEGG: PANA_2272 # Name: not_defined # Def: Hypothetical Protein # Organism: P.ananatis # Pathway: not_defined # 1 352 1 355 359 400 53.0 1e-110 MITAYEHWLSLPPYGWTQAEKERRYIPYLQELTAYHRNRCAAYDRALQVQHYTKADTLAQ LPFLPVSLFKKFDLKSIKETEIFKTVTSSGTSGQAVSRIPLNAANARAQQTVLSRIGQHF LGSQRLPMLIIDTPAVFADRNTFNARGAAILGFSLFAKKKYFALQEDLSLNQDILKHFAD HPSQPFFIFGFTAMIWKYFYEAVKNASYTVDFSHAVLIHGGGWKKMLAQSVTAAAYKQAL TRIFGITRIHNYYGMAEQTGCIYMECEYGHLHASIFSDILIRDPLDFSLCPVGKEGIVQV LTPLATAYVGHSILTEDLGVLLGTDDCPCGRKGNYFHIHGRIPQAELRGCSDVPH >gi|290782111|gb|ADGP01000005.1| GENE 80 87740 - 88921 724 393 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2197 NR:ns ## KEGG: bpr_I2197 # Name: not_defined # Def: acyl-CoA reductase # Organism: B.proteoclasticus # Pathway: not_defined # 20 392 20 397 399 243 34.0 2e-62 MSRIEKYTLLAGCIPQVVHPRRPFASLILQFIQDFRRALLTTATVSAEWKALAFLLRPSH LKKIEEDVSRPTSRLGRGLIFQIPPANMPTVFMYGFLFSLLSGNGNIIRISSRIAEETKP ILALLTALWQQPDYTPLQQENAFVFYEKDDAVTAYFSSLCNGRILWGNDRTIRHLRQIPL PPQALELIFPDRYSLALIRASCVIEATEAELKTAAYQFYNDTYEADQNGCSSPRTVIWLG DPHTAQQAACRWWAQVAHISEKYPLTAAKTMLKYTQMWEAALSLPIRGSLHKYTNRLYVY SLPTLPRDISILNGTCGYFYETALPRTADIWPYISPKIQTFTVLGLSAKTIRNELIQQRV SGIDRIVPFGQALIMDTVWDGINIIDTLSRYLR >gi|290782111|gb|ADGP01000005.1| GENE 81 88934 - 90343 1112 469 aa, chain + ## HITS:1 COG:SMc00592 KEGG:ns NR:ns ## COG: SMc00592 COG0318 # Protein_GI_number: 15964914 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Sinorhizobium meliloti # 8 468 18 463 885 256 35.0 5e-68 MYFFDMYAPLSSRPLCTDDTGRLVTYGDWYAHASTVATYIRPRALAAIICRNTAGSLLSY LSCLQNRIVPLMLDPAVAPELQEKLLRRYEPEYIFQPRNTTAAHALYSLADYGLYHTKAT PCPLHPDLALLLTTSGSTGSPKLVRQSYRNLQANAASIAAYLNLQPDQYPISSLPMHYTF GLSVIHSHLYCGAAIRLTENTVFDNGFWDICRDEKITSLAGVPFTYACLDKLGFQNMDLP HLTLLLQAGGRLGEPLHKKFGTYAQEKNKRFIVMYGQTEATARMSYLPAAACLKKIGSIG IAIPGGFFRIMENETEEITVPEQPGELYYEGDNVTLGYAETRADLQKGDERHGRLFTGDI AYKDEDGYFYIVGRKKRFIKLTGKRFNLDEAEQLLKNSLTTGEVACTGKDEQLQIYTTAS QELPALEAILQHTLQLLPRQYVLQVVNTIPKNSSGKIQYTRLTQPEAAL >gi|290782111|gb|ADGP01000005.1| GENE 82 90442 - 91902 1345 486 aa, chain + ## HITS:1 COG:BH0992 KEGG:ns NR:ns ## COG: BH0992 COG3829 # Protein_GI_number: 15613555 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Bacillus halodurans # 20 478 20 451 454 318 40.0 2e-86 MARRDLFSSLGEANVHLNAIIEHSFDGIFITDGKANVLRINSAYESITGLKKEDVLGKNM TDLVKRKVISDSGSLIVIRKKTPVTLHQQFRTGKEALVTSSPIFDSTGKLIMVVTNVRDL TEIFSLKDAVQRKTAALERLRLELAHLQETVIKDELVMKDEAALSALLLANRVSPMDTTV LLLGETGVGKEVLAHYIYQNSRRSHGSFIKVNCGAIPESLIESELFGYESGAFTGANRNG KIGLFELANKGTLFLDEIGELPKAMQVKLLRALQEQEIMRVGGTKPIQINTRIIAATNRN LKDMVKQGKFREDLYYRLTVFPISLPPLRQRPKDIIPLAESFLTKLNQKYSFQKHFSPYS CRVLQEYAWPGNIRELKNIVERAIIISSEDEIRPEDLHIIQAPKAPLPLREESPAPTLHP HVSSSSTALSELPANLTHILAAQEYAYLQKAYEQTHTVREAAKLLHMTPSKFVRRRKRCQ ELLQLP >gi|290782111|gb|ADGP01000005.1| GENE 83 91967 - 92332 453 121 aa, chain + ## HITS:1 COG:no KEGG:Rumal_1565 NR:ns ## KEGG: Rumal_1565 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 1 91 1 90 238 103 53.0 3e-21 MARPQRCRRICAIPEAEEFIPRNSLPGTTCITLSLDEYEVIRLIDFEGLTQEQCARQIHV ARTTVTTIYEKARYKLARTLVKNQKLRIAGGAVEICPHTATCTVPYCHDAGNHTKGDVSY E >gi|290782111|gb|ADGP01000005.1| GENE 84 92325 - 93161 1031 278 aa, chain + ## HITS:1 COG:AF2382 KEGG:ns NR:ns ## COG: AF2382 COG0489 # Protein_GI_number: 11499959 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Archaeoglobus fulgidus # 36 267 17 250 254 229 47.0 4e-60 MSENCSKEACSGCPSAGGCGSARQQPFAALHAGSHVKHVIAIVSGKGGVGKSLVTSLMAV QMQRRGLKTAILDADITGPSIPKAFGITDHAKGDKNGIYPVTGTAGTKIMSMNLLLEDAA APVVWRGPVISGAVKQFWTDVIWGDIDYMFIDMPPGTGDVPLTVFQSLPINGILVVTSPQ ELVSMIVEKALNMSTMMKVPVLGLIENMSYFECPDCHTRHEIFGTGHVQDAADKYGIAHT AKLPIDPQLAAYCDQGKIEDYPTSYLQETAEYVLKTVK >gi|290782111|gb|ADGP01000005.1| GENE 85 93236 - 93847 680 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967843|ref|ZP_06559396.1| ## NR: gi|290967843|ref|ZP_06559396.1| hypothetical protein HMPREF0889_1516 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1516 [Megasphaera genomosp. type_1 str. 28L] # 1 203 1 203 203 385 100.0 1e-106 MKAVMNGIILSQGKLLSGQVMMYEETIWKIVPRSQTRVGMCVEIIDAAGGFIVPGWIHMK VPFLDGEETQRGRLLASQGITAMVPAAVENLQAATVAGGIRVLPCSYTEEAGVLPMIQEP DTAVNFASHVRTCLQEKQYEFTELMQQLSEVPAQRLGQARQGRLAVTYAADFVILDNGEL QVQQTVVGGELVYDATDGTRILR >gi|290782111|gb|ADGP01000005.1| GENE 86 94006 - 94146 60 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967844|ref|ZP_06559397.1| ## NR: gi|290967844|ref|ZP_06559397.1| hypothetical protein HMPREF0889_1517 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1517 [Megasphaera genomosp. type_1 str. 28L] # 1 46 1 46 46 76 100.0 6e-13 MWIEVGIGEYMRKIFSYKREKIVFIVHNADAVTGKKTDKRRIYGIK >gi|290782111|gb|ADGP01000005.1| GENE 87 94200 - 94496 454 98 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1746 NR:ns ## KEGG: Vpar_1746 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 93 1 93 94 83 45.0 2e-15 MSIYRVAAHTGVNDNGYIEYNTETKQVSAHFPDEAVNRKAMAYLTQEQEMHRLVDLVTYE TVRAVPASSWENLKLALCYIWTRAGIYIDWSRPVDLNE >gi|290782111|gb|ADGP01000005.1| GENE 88 94515 - 95681 1418 388 aa, chain - ## HITS:1 COG:lin2082 KEGG:ns NR:ns ## COG: lin2082 COG0389 # Protein_GI_number: 16801148 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 4 345 5 347 356 260 41.0 4e-69 MQRRLIMHVDMDAFYASIEQRDRKELRGKPVIIGGLSGRGVVATASYEARRFGVHAAMSM REAHVRCPQGVFLSPRLAYYRRISQEIRTIFYEYSPVVEPLALDEAFLDISGMERQYPQV YTLARSIKERILRQTGLEASAGIGANKFLAKVASDLEKPNGLVVVPEGKEAAFLAPLPIR RLWGVGNVTAQALARAGFFFIGQVAQASVEDLQQVVGKQAHYLQLLANGKDARPVVATRA MQSIGQEHTYEEDLATERAIDENLRKLAYETAYRLRQQGVEGRTITLKIRFASFRTITRS FTAPMQEIYREADVYRISRRLYEKTARQEPIRLLGLTVRHLRRRYEQPSLFDEDTASQEK LAKTIDAVQRRFGKQALMKGLFWDSSQS >gi|290782111|gb|ADGP01000005.1| GENE 89 95985 - 96902 264 305 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|30995401|ref|NP_438934.2| transcriptional regulator [Haemophilus influenzae Rd KW20] # 4 284 1 284 301 106 25 5e-22 MNLIMDLLQLTYFVEVAHKKSFTKASKALHISQPSISKGIKALEAHWHVQLFDRKGKAIE LTERGAYLLPKIEEIIKDFSKLNEEIESPHLLNTGRLAVGIPPMVGSSFISPFITYFMSL YPHIELELAEVGSKDVISAIDDGLIQAGIVALPIQTDMPYNFFIFNREMLNVVIWPDHPL AHKKELTLMEIKDEPLIYYPHTFTLHAYIRSFYQEIMAHPKIVCHSSHWDFISEMVHSHL GIALLPQSICKRIKPETARCIPLVKPVIPWTLAMIWKSKGFLSHPARTWVQSFKEYYGEN NRPTL >gi|290782111|gb|ADGP01000005.1| GENE 90 97019 - 97105 56 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIETLQRHIVTLEQKVQQLEAARTGQRK >gi|290782111|gb|ADGP01000005.1| GENE 91 97340 - 98218 899 292 aa, chain - ## HITS:1 COG:no KEGG:Shel_06680 NR:ns ## KEGG: Shel_06680 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 63 266 54 259 337 203 50.0 7e-51 MRNLWGKLILILAAVFCLGGCSTSPQGAETTVRQVVQQSTQRVGETVALGAAEKNVVVAG TAVPAYRGEDYYILNNNIPFFSEQDLHKRRGTIELSPLDRWGRCGGNFMIVGPETLPHVK REGIGMVRPSGWKLAKYDFVENHYLYNRSHLLGYQLSGLNADRRNLITGTEYFNKRLMLP YENRVAETAKRGLHIAYRVTPIYQGRELVARGVVMEGYSLEDRGRLHFNVFVYNIEPGVV IDYADGTSYASGDADSIREKRAVEKSIRRHKKKIRNHEESNTVHQRYVRYAS >gi|290782111|gb|ADGP01000005.1| GENE 92 98249 - 98668 390 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967850|ref|ZP_06559403.1| ## NR: gi|290967850|ref|ZP_06559403.1| hypothetical protein HMPREF0889_1523 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1523 [Megasphaera genomosp. type_1 str. 28L] # 1 139 1 139 139 276 100.0 3e-73 MKSGEGIIAEVLENDRVKIQVGREHLFTACSSCIGAERVVVTAKNTVHAKKGQTVRYQMP EGHLILGAFICFVLPLVCLALTIGAAYYVSIINGYPSIPWMLGGACSGGAAVFGIWKKMD TEISSLVKTEPYIYEIIQH Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:22:28 2011 Seq name: gi|290782107|gb|ADGP01000006.1| Megasphaera genomosp. type_1 str. 28L contig00034, whole genome shotgun sequence Length of sequence - 3575 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 23 - 970 1024 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 1189 - 1248 10.8 + Prom 1165 - 1224 9.6 2 2 Op 1 18/0.000 + CDS 1286 - 2788 1647 ## COG0554 Glycerol kinase 3 2 Op 2 . + CDS 2819 - 3544 1051 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Predicted protein(s) >gi|290782107|gb|ADGP01000006.1| GENE 1 23 - 970 1024 315 aa, chain - ## HITS:1 COG:BS_deoR KEGG:ns NR:ns ## COG: BS_deoR COG2390 # Protein_GI_number: 16080994 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Bacillus subtilis # 1 310 1 310 313 325 50.0 6e-89 MTKNKNKLAISAAKLYYQSDFSQAEIAKELDISRPSVSRLLQYAKDKGFVRIEIFDPIED QSHLAKKLMHAYKLKHVAIANAPIENEEDIKLYIGRKGAEYLSTIIKDGDIIGVGWGTTM HHLSHSLTPHELKGAQIVQLEGGITLSASETYATEVLERFAANYKTVAQSLPLPVLFDSR EVRDMVYRDRHIQRVLELGKNANIALFSVGTVRNTALFFRLGYADDNEKKFIKEHAVGDI CSRFFTKDGTIADPDLNARTVGLDLEYLRHKEYSILLAGGQAKLEGIYAALQGGYANVLI TDRFTAQRLLEWATK >gi|290782107|gb|ADGP01000006.1| GENE 2 1286 - 2788 1647 500 aa, chain + ## HITS:1 COG:BS_glpK KEGG:ns NR:ns ## COG: BS_glpK COG0554 # Protein_GI_number: 16077994 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Bacillus subtilis # 3 493 2 493 496 705 69.0 0 MQKKYVMSLDAGTTSNRAIIFDEESHIVSVCQKEFTQHFPHAGWVEHDANEILHTMIEVM KGALEQSGITGADIAAIGITNQRETTVVWDKITGCPIYNAIVWQSRQTADICEELKHQGL VEEFREKTGLLIDAYFSGTKVKWILDHVEGAREKAKKGELLFGTVDSWLIWKLTGNKVHV TDYSNASRTLMFNIKTLQWDDDLLRYLTVPKQMLPEVRPSSEVYGETLPSILGVPVKIAG AAGDQQAALFGQTCFSPGMAKNTYGTGCFMLMHTGEKAIPSKNGLVTTIAWGLDGKVEYA LEGSIFVAGSAIQWLRDGLRLLDTAPDSEWVAKRVPDSDGVYVVPAFVGLGAPYWDMDAR GMIIGLTRGTTKAHVVRATLDSMAYQTKDVLGAMEADSGIKLADLRVDGGAVANNMLMQF QADILGVPVERPQIIETTALGAAYLAGLAVGVWASKEELKQRWQLQNRFEPSMKPDQAAA YYKGWRKAVKHAMHWLADED >gi|290782107|gb|ADGP01000006.1| GENE 3 2819 - 3544 1051 241 aa, chain + ## HITS:1 COG:lin1574 KEGG:ns NR:ns ## COG: lin1574 COG0580 # Protein_GI_number: 16800642 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Listeria innocua # 4 231 10 232 272 200 49.0 2e-51 MDNLLGEFFGTMVLMVFGCGVCACNTLTKSKGQGGGWICITAGWGFAVTLGVFTATTLGA PQGDLNPAVTLGKTLIGLYTVPQFLATSIVQVIGGICGAALVWLAYLPHWAETEDKAAKL GIFCTAPAIRKYPLNFLCEMIASFFLMFIIWMIFSKQVGVIPAGMGPYIVGILVWAIGMS LGGPTGYAINPARDLGPRLAHFILPIAEKGSSDWAYAWVPVVAPLVGAVVAYGVAVLLTV F Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:22:33 2011 Seq name: gi|290782096|gb|ADGP01000007.1| Megasphaera genomosp. type_1 str. 28L contig00002, whole genome shotgun sequence Length of sequence - 11608 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 5, operones - 1 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 73 - 124 7.8 1 1 Tu 1 . - CDS 147 - 1571 1582 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 1622 - 1681 6.0 - Term 1752 - 1795 9.1 2 2 Tu 1 . - CDS 1801 - 3189 1395 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 3220 - 3279 6.4 - Term 3209 - 3250 6.0 3 3 Op 1 . - CDS 3485 - 4261 942 ## COG0496 Predicted acid phosphatase 4 3 Op 2 . - CDS 4276 - 5523 1141 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 5 3 Op 3 14/0.000 - CDS 5543 - 6226 924 ## COG1183 Phosphatidylserine synthase 6 3 Op 4 . - CDS 6223 - 6861 700 ## COG0688 Phosphatidylserine decarboxylase 7 3 Op 5 . - CDS 6871 - 7590 727 ## COG1922 Teichoic acid biosynthesis proteins 8 3 Op 6 . - CDS 7622 - 9079 2056 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 9104 - 9163 7.8 9 4 Tu 1 . - CDS 9208 - 11244 2314 ## COG1200 RecG-like helicase - Prom 11286 - 11345 10.4 + Prom 11234 - 11293 9.6 10 5 Tu 1 . + CDS 11380 - 11571 282 ## PROTEIN SUPPORTED gi|8928328|sp|O50656|RL28_SELRU RecName: Full=50S ribosomal protein L28 gi|2897823|dbj|BAA24922.1| hypothetical protein Predicted protein(s) >gi|290782096|gb|ADGP01000007.1| GENE 1 147 - 1571 1582 474 aa, chain - ## HITS:1 COG:RSc1456 KEGG:ns NR:ns ## COG: RSc1456 COG1012 # Protein_GI_number: 17546175 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Ralstonia solanacearum # 6 467 7 470 478 387 47.0 1e-107 MDFKKLYIDGRWVEGVSGKFIGVENPATETVFAEVPAGTAMDVDRAAKAAKAAFTAWAHT PLSERIEKMRTMATIFKTMETALTTAIVQELGAPVGFSRTAQVQYQFERIQSYIELASTV RWVEKLPHATVYREPVGVVGCITPWNYPLGQIVQKVIPAILAGNTVVLKPSQHTPLTAFY LAEAFHRAQFPKGVFNLVTGRGGDIGDVMAEHEDLQMISFTGSTPAGVSVARLALQSMKR ISMELGGKSPCILLPGCDYEKAISMCFNSIFLNSGQTCTALSRLLIPVQDKEKIEALLKK TVSSYTVGDPTREDVQLGTVSSARQFKTIRAYIEKGLRGGADLLAGEIPQKTSVGYYVQP TIFTNVTNDMTIAQEEIFGPVLCVITYRTEAEAVRIANDTRFGLSGAVWGATKEEAVRIA RQIRTGNVYINDGPRDVTAPFGGFKESGLGREGGVDGILEFTEPQALFDDGTIG >gi|290782096|gb|ADGP01000007.1| GENE 2 1801 - 3189 1395 462 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 444 6 446 456 541 62 1e-154 MLEVLQTIDSFIWGPPLLFLLIGTGVLLTIRLGVLQITQLPKALALIFTAKNKGQGDINS FKALCTALAATVGTGNIVGVATAVHAGGPGAVFWMWIAAFVGMATKYAEGCLAVKYRRVD KNGDIAGGPMHYIEMGLGKKYKPLAVLFAIFGVLVAFFGIGTFAQVNAIVEITRLSANIP VVYTGLVLTLVVAAVTIGGLQSIAKTASKIVPAMAVIYVITTLGFLIIFYEQVPAAFLEI IHDAFHPTAAAGGFLGAGVLMAMRSGVARGVFSNESGLGSAPIVAAAAKTKWPAEQGLIS MTGTFIDTIIICTLTGLVLVVSGGWMGDLNGAALTNSVFAMAYPVMGSFILCIGLVLFAF TTILGWNYYGERCIEYLVGVKGILPYRLVFIVLVGLGAFIKLDVIWILADIVNGLMAIPN LIALIGLSGVVVRETKRYFQYIHLRRERWEAVKRVQKLRVEE >gi|290782096|gb|ADGP01000007.1| GENE 3 3485 - 4261 942 258 aa, chain - ## HITS:1 COG:XF0858 KEGG:ns NR:ns ## COG: XF0858 COG0496 # Protein_GI_number: 15837460 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Xylella fastidiosa 9a5c # 1 258 1 258 262 138 36.0 1e-32 MHILLTNDDGVRAPGLAVLKHCFAAHGYEVTVVAPNGQRSAASHAMTIRKPLYCQETTAG DGGIREIAVSGTPVDCVKLAMEYFLCTRRPDVIVSGINDGFNLGSDVLYSGTVSAAMEGP YYQVPALAVSMGKMDRQRGKETAEIVHGIIQNIVVRDKFPGILNVNIPLQGPVVWENIRV VPQALQVYNNVILEKRDMDNGICYHIEGSPDLEMAPEESDIACVRRGKIAVTPLQWQQTA KNAILTVQRGLQKNTCHL >gi|290782096|gb|ADGP01000007.1| GENE 4 4276 - 5523 1141 415 aa, chain - ## HITS:1 COG:CAC1691 KEGG:ns NR:ns ## COG: CAC1691 COG1215 # Protein_GI_number: 15894968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 1 402 1 416 425 370 42.0 1e-102 MEHVSDILMIPVQVIIVFYTLYYFILALFGLFKRKEKISVPPKHTFAAIICAHNEETVVG QLIDNLKTLHYPAEMYDIYVVADNCTDRTAEVCREHGASVQIRTDAEKVGKGFAMDWMFQ KMLRQPKQYDAFVVFDADNLVHPEFLREMNNHLCKGEQVIQGYMDAKNPTDTWVAGTFSI AFWLINHMWHLAKYNIGLSTALGGTGMCIAADIVRKYGWGCDCLTEDMEFSMKVLLEGVR TCWAHDAIIYDEKALTLMQSCRQRKRWAQGQCDCACRFIPKLFVRGVRTGNIRMLDGIIT LSQQFFMMMSTIYAVLAFINGHYLFYTNILNQIVPVQMWTVIGVAQYVIPIIVLLRIKVR FKSWLYLIVYPLFMYSWIPVTFLGFKDRHKMEWSHTVHTRAVTYESAVLLRKKNK >gi|290782096|gb|ADGP01000007.1| GENE 5 5543 - 6226 924 227 aa, chain - ## HITS:1 COG:RSc2073 KEGG:ns NR:ns ## COG: RSc2073 COG1183 # Protein_GI_number: 17546792 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Ralstonia solanacearum # 4 179 46 228 291 107 38.0 2e-23 MKKVIPCLFTSGNLAFGLISMMMTLKGMYMWAGICILLAMVCDACDGRSARALGVAGEFG KELDSLSDVVSFGAAAAFLIYGYALQHLGWWGAIPAVIYAALGGIRLARFNLNTGVVHGY FQGMPIPNGGGLIAMYAISGVHLPEGLIAVLVIALGYHLVSNVHNPDFKGNSPDVLHPVA LAGAVIIGILVLVFADWHLFWTMPFFLYIIFGLINTAMNSRKNKGVQ >gi|290782096|gb|ADGP01000007.1| GENE 6 6223 - 6861 700 212 aa, chain - ## HITS:1 COG:SMc00551 KEGG:ns NR:ns ## COG: SMc00551 COG0688 # Protein_GI_number: 15964874 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Sinorhizobium meliloti # 9 208 17 218 232 117 33.0 2e-26 MKKPYIVPDGYRIIGITLAITFLLAYFVTVYIAVFPFLWACYLLYFFRNPSRHIQAAPHE LVSPADGTVMAVTEVWEEAYFFKKCRKIVIFLSVFNVHVNRAPLAGVIDFQQYTCGRFKP AYETGVGYENERYSIGIKSGNTHILVTLIAGILARRIVSWVALGEKVEHGQLYGMIKLGS CAEIYVDEDVEILVKEGDIVRGGETVIGRIAE >gi|290782096|gb|ADGP01000007.1| GENE 7 6871 - 7590 727 239 aa, chain - ## HITS:1 COG:alr1705 KEGG:ns NR:ns ## COG: alr1705 COG1922 # Protein_GI_number: 17229197 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Nostoc sp. PCC 7120 # 30 230 35 237 250 176 44.0 3e-44 MDILSIPVANKSRAEVCAQVFSYIENHVPAMIATANAEMIMKAQTDRELATILRAAELVV PDGAGVLWAAEQQGKKFKERVTGVDLACSLLQEAAARQTPVYFLGGMPGIAARAAADIEK KVGKLQLVGTHSGFFSASEETEIMEEIRAGGTRLLLVALGVPKQEKWIAQHAAQLGSCVC MGVGGTFDVWAGKTCRAPQWMQEHRLEWLYRLWKEPSRFMRMWALPRFVIAVKKRHRGK >gi|290782096|gb|ADGP01000007.1| GENE 8 7622 - 9079 2056 485 aa, chain - ## HITS:1 COG:CAC2701_3 KEGG:ns NR:ns ## COG: CAC2701_3 COG0516 # Protein_GI_number: 15895958 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Clostridium acetobutylicum # 207 485 1 279 280 389 68.0 1e-108 MRSDKFGMRGLTFDDVLLVPAKSDVLPTEVDVSTNLTKDIKLNIPIMSSGMDTVTEAPMA IAIAREGGIGVIHKNMSIAAQAREVDKVKRSEHGIIIDPIFLNPDNLLADANELMEKYRI SGVPITVDGKLVGIITNRDMRFEEDMSRRIGDIMTAENLVTAPVGTSLAEAKEILRNHRI EKLPLVDKEGNLKGLITIKDIEKAHKYPNSAKDSNGRLRVAAAVGVTHDMIDRLDALVSA KADVIVIDTAHGHSLGVLKTLKEIKKAYPHVPVIAGNVATGAATEALIECGVDAVKVGIG PGSICTTRIIAGIGVPQITAVYECAKVAQRYGIPVIADGGIKYSGDMAKAIAAGGNVVMM GNLLAGTEESPGETVIYQGRSYKEYRGMGSLAAMEQGSKDRYFQEDSKKLVPEGIEGRVP YKGPAADTIFQMVGGLKASMGYCGCHTIAEMIDKTQFIQITSAGLRESHPHDINITKEAP NYSMN >gi|290782096|gb|ADGP01000007.1| GENE 9 9208 - 11244 2314 678 aa, chain - ## HITS:1 COG:BH2495 KEGG:ns NR:ns ## COG: BH2495 COG1200 # Protein_GI_number: 15615058 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Bacillus halodurans # 7 649 2 641 673 496 44.0 1e-140 MKTDLREIKGIGVRKEKLLNRLGIFTIFDLLQYFPRTYEDRRYISPMATISLPRTEPVLI CGYVQRIQEVHPRRGLSILKVGIADDSGEAELIWFNQPFKKKLFTVHQQLTVFGKMEAAY GKRQMNNPDIEEGCVTGTALEPVYGLTEGLRQKELRNFIRDALNYMEEHSGLTEADTEVP FLYPTMSLYEAYRTIHFPDSLEAREKARRQLAFQELFDLQLGLALRRRGEKKKAGIKCAP NGGLLQAVVKNLPFLLTQGQTNAFLDIQSDMESEVPMQRLVQGDVGSGKTAVAALALAKI VENGYQGALMAPTEILATQHAEELARLFQGIPIKTALLTGRIGAKERQRVLQEIADGSIQ VVIGTHALLQEDVQFAHLGLVVTDEQHRFGVKQRAALQEKGRAPHGLFMTATPIPRTLAL SVYGDLDVSSIRELPPGRKPVKTYAVKETMRARIYAFMKKLICAGQQCYVVCPLVEESAA LDLQAATGLYEMLKEKVFKEFHCGLVHGRMKGKEKETVMKAFQEKRIDILVATSVIEVGV NVPNATLMLIDGAERFGLAQLHQLRGRVGRGDLQAYCILLAHGGTEETRQRLHWMESVQD GFVLAEKDLLLRGSGKLFGYMQHGLPDFKAADILKDVQLLSQAREAAQTYMAVEPDETRV RARLKRRFGAAFDGILNN >gi|290782096|gb|ADGP01000007.1| GENE 10 11380 - 11571 282 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|8928328|sp|O50656|RL28_SELRU RecName: Full=50S ribosomal protein L28 # 1 61 1 61 63 113 83 7e-25 MANYCEICGKGKMAGMNVSHSHLKTKRTWKPNIQRVRAMVEGEVKRVNVCTRCLRSGKVQ RDV Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:23:02 2011 Seq name: gi|290782006|gb|ADGP01000008.1| Megasphaera genomosp. type_1 str. 28L contig00001, whole genome shotgun sequence Length of sequence - 102716 bp Number of predicted genes - 87, with homology - 83 Number of transcription units - 42, operones - 18 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 20/0.000 + CDS 62 - 562 189 ## PROTEIN SUPPORTED gi|170754849|ref|YP_001782001.1| ribosomal protein L32 family protein 2 1 Op 2 . + CDS 592 - 777 242 ## PROTEIN SUPPORTED gi|227371476|ref|ZP_03854960.1| LSU ribosomal protein L32P + Term 789 - 832 3.7 + Prom 814 - 873 8.1 3 2 Op 1 14/0.000 + CDS 911 - 1411 774 ## COG0817 Holliday junction resolvasome, endonuclease subunit 4 2 Op 2 29/0.000 + CDS 1408 - 2010 624 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 5 2 Op 3 . + CDS 2013 - 3029 1234 ## COG2255 Holliday junction resolvasome, helicase subunit 6 2 Op 4 . + CDS 3068 - 4309 1234 ## COG2385 Sporulation protein and related proteins 7 2 Op 5 17/0.000 + CDS 4323 - 5342 983 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 8 2 Op 6 15/0.000 + CDS 5355 - 6461 1169 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 6479 - 6538 4.6 9 2 Op 7 . + CDS 6689 - 6958 362 ## COG1862 Preprotein translocase subunit YajC 10 2 Op 8 . + CDS 6963 - 7532 416 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 11 2 Op 9 31/0.000 + CDS 7557 - 8858 1782 ## COG0342 Preprotein translocase subunit SecD 12 2 Op 10 . + CDS 8855 - 9814 902 ## COG0341 Preprotein translocase subunit SecF + Term 9821 - 9885 10.0 + Prom 9821 - 9880 1.7 13 3 Tu 1 . + CDS 9901 - 10224 480 ## Acfer_1221 hypothetical protein + Prom 10261 - 10320 8.5 14 4 Tu 1 . + CDS 10346 - 10885 714 ## COG1268 Uncharacterized conserved protein + Term 10937 - 10972 7.4 15 5 Op 1 . + CDS 10986 - 11693 979 ## COG0813 Purine-nucleoside phosphorylase 16 5 Op 2 22/0.000 + CDS 11708 - 12037 530 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 17 5 Op 3 . + CDS 12027 - 12659 489 ## COG0602 Organic radical activating enzymes + Prom 12707 - 12766 9.6 18 6 Op 1 . + CDS 12805 - 13638 1058 ## Mthe_0610 pyridoxamine 5'-phosphate oxidase-related, FMN-binding 19 6 Op 2 . + CDS 13642 - 14649 1002 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 14682 - 14727 12.1 - Term 14666 - 14719 11.8 20 7 Tu 1 . - CDS 14721 - 15545 735 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 15617 - 15676 5.1 + Prom 15486 - 15545 2.8 21 8 Tu 1 . + CDS 15620 - 17128 1524 ## COG1109 Phosphomannomutase + Term 17142 - 17180 5.2 - Term 17433 - 17473 -0.7 22 9 Tu 1 . - CDS 17510 - 18421 894 ## COG0583 Transcriptional regulator - Prom 18524 - 18583 8.5 + Prom 18787 - 18846 8.3 23 10 Tu 1 . + CDS 18867 - 22388 3486 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 22410 - 22455 12.1 + Prom 22479 - 22538 3.1 24 11 Tu 1 . + CDS 22558 - 23028 450 ## gi|290967890|ref|ZP_06559440.1| putative lipoprotein + Term 23035 - 23075 6.7 - Term 23019 - 23067 11.0 25 12 Tu 1 . - CDS 23107 - 23652 808 ## COG1592 Rubrerythrin + Prom 23766 - 23825 10.4 26 13 Op 1 . + CDS 23937 - 25409 1700 ## Vpar_0646 hypothetical protein 27 13 Op 2 . + CDS 25393 - 26802 1212 ## Vpar_0647 hypothetical protein + Term 26873 - 26922 16.2 - Term 26860 - 26909 16.2 28 14 Tu 1 . - CDS 26949 - 27032 85 ## - Prom 27101 - 27160 10.3 + Prom 27076 - 27135 11.3 29 15 Op 1 . + CDS 27367 - 27942 638 ## Nwi_2333 hypothetical protein 30 15 Op 2 . + CDS 28000 - 29244 1108 ## COG0232 dGTP triphosphohydrolase 31 15 Op 3 . + CDS 29257 - 29484 235 ## COG4728 Uncharacterized protein conserved in bacteria + Term 29506 - 29549 7.0 - Term 29486 - 29543 16.4 32 16 Tu 1 . - CDS 29562 - 29768 410 ## Acfer_1310 hypothetical protein - Prom 29822 - 29881 8.1 + Prom 29922 - 29981 7.5 33 17 Op 1 . + CDS 30010 - 30441 549 ## Vpar_1586 hypothetical protein 34 17 Op 2 . + CDS 30441 - 32105 2239 ## COG0018 Arginyl-tRNA synthetase 35 17 Op 3 . + CDS 32168 - 33787 1800 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 33794 - 33833 12.1 36 18 Op 1 12/0.000 + CDS 34398 - 35738 1646 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 37 18 Op 2 12/0.000 + CDS 35767 - 36792 1035 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 38 18 Op 3 13/0.000 + CDS 36794 - 37348 828 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 39 18 Op 4 3/0.000 + CDS 37348 - 37971 995 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 40 18 Op 5 12/0.000 + CDS 37971 - 38546 842 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 41 18 Op 6 . + CDS 38571 - 39419 1001 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 42 18 Op 7 . + CDS 39424 - 40485 1356 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis + Term 40519 - 40562 0.8 + Prom 40532 - 40591 4.2 43 19 Tu 1 . + CDS 40632 - 41072 442 ## COG1522 Transcriptional regulators + Term 41086 - 41128 5.3 + Prom 41098 - 41157 11.0 44 20 Tu 1 . + CDS 41210 - 43111 2081 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 43123 - 43172 11.2 + Prom 43135 - 43194 11.3 45 21 Tu 1 . + CDS 43265 - 44674 1633 ## COG0277 FAD/FMN-containing dehydrogenases + Term 44681 - 44727 11.1 + Prom 44915 - 44974 4.7 46 22 Op 1 . + CDS 44994 - 46514 1857 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 47 22 Op 2 . + CDS 46531 - 47910 1685 ## COG0114 Fumarase + Term 47923 - 47965 5.1 + Prom 47984 - 48043 9.1 48 23 Op 1 2/0.000 + CDS 48119 - 48883 980 ## COG1424 Pimeloyl-CoA synthetase 49 23 Op 2 . + CDS 48870 - 50039 954 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 50 23 Op 3 . + CDS 50027 - 50566 592 ## Selsp_0125 hypothetical protein + Term 50582 - 50622 6.1 + Prom 50643 - 50702 6.8 51 24 Op 1 . + CDS 50781 - 51266 671 ## COG0219 Predicted rRNA methylase (SpoU class) 52 24 Op 2 . + CDS 51282 - 51629 576 ## gi|290967917|ref|ZP_06559467.1| hypothetical protein HMPREF0889_0050 53 24 Op 3 . + CDS 51619 - 52542 1025 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 52552 - 52591 8.4 + Prom 52579 - 52638 11.2 54 25 Tu 1 . + CDS 52693 - 54498 2291 ## COG1217 Predicted membrane GTPase involved in stress response + Term 54513 - 54546 2.1 + Prom 54552 - 54611 3.5 55 26 Tu 1 . + CDS 54632 - 54898 134 ## + Prom 55139 - 55198 6.4 56 27 Tu 1 . + CDS 55329 - 56750 1841 ## Vpar_0557 S-layer domain protein + Term 56770 - 56816 11.4 + Prom 56784 - 56843 8.9 57 28 Op 1 19/0.000 + CDS 57077 - 57958 1402 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 58 28 Op 2 . + CDS 57955 - 60009 2267 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 60022 - 60067 8.1 + Prom 60197 - 60256 5.0 59 29 Tu 1 . + CDS 60304 - 61503 1306 ## COG0787 Alanine racemase + Term 61588 - 61632 8.2 + Prom 61524 - 61583 17.1 60 30 Tu 1 . + CDS 61768 - 62946 1239 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 63102 - 63171 4.1 + Prom 63315 - 63374 11.3 61 31 Op 1 . + CDS 63495 - 63896 601 ## CLOST_2503 hypothetical protein 62 31 Op 2 . + CDS 63912 - 64334 531 ## Selsp_0207 protein of unknown function DUF805 + Term 64356 - 64409 10.1 + Prom 64474 - 64533 6.7 63 32 Tu 1 . + CDS 64653 - 64805 89 ## + Term 64828 - 64877 2.6 - Term 64772 - 64802 4.3 64 33 Tu 1 . - CDS 64845 - 65405 469 ## COG2169 Adenosine deaminase - Prom 65452 - 65511 7.1 + Prom 65475 - 65534 10.8 65 34 Op 1 . + CDS 65677 - 65892 320 ## gi|290967932|ref|ZP_06559482.1| FeoA domain protein 66 34 Op 2 22/0.000 + CDS 65910 - 66131 248 ## COG1918 Fe2+ transport system protein A 67 34 Op 3 . + CDS 66148 - 68331 2519 ## COG0370 Fe2+ transport system protein B 68 34 Op 4 . + CDS 68359 - 68487 119 ## + Term 68522 - 68557 5.1 + Prom 68529 - 68588 6.2 69 35 Op 1 . + CDS 68608 - 69921 1658 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase + Term 69936 - 69968 2.0 70 35 Op 2 5/0.000 + CDS 69991 - 72198 2270 ## COG0210 Superfamily I DNA and RNA helicases 71 35 Op 3 . + CDS 72218 - 74224 1968 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 72 35 Op 4 31/0.000 + CDS 74295 - 74585 415 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 73 35 Op 5 21/0.000 + CDS 74606 - 76063 1845 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 74 35 Op 6 . + CDS 76060 - 77502 1668 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 77513 - 77559 14.1 + Prom 77504 - 77563 6.9 75 36 Op 1 . + CDS 77705 - 79162 1881 ## COG0471 Di- and tricarboxylate transporters 76 36 Op 2 . + CDS 79181 - 79753 916 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 77 36 Op 3 . + CDS 79769 - 81268 1569 ## COG0427 Acetyl-CoA hydrolase + Term 81309 - 81348 5.3 + Prom 81602 - 81661 8.1 78 37 Tu 1 . + CDS 81689 - 82366 719 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 82466 - 82497 0.0 + Prom 82723 - 82782 8.6 79 38 Tu 1 . + CDS 82805 - 87688 4495 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 87728 - 87767 8.2 + Prom 87762 - 87821 9.2 80 39 Op 1 7/0.000 + CDS 87860 - 90001 2610 ## COG0556 Helicase subunit of the DNA excision repair complex 81 39 Op 2 1/0.000 + CDS 90007 - 92871 3129 ## COG0178 Excinuclease ATPase subunit 82 39 Op 3 . + CDS 92861 - 94699 2014 ## COG0322 Nuclease subunit of the excinuclease complex 83 39 Op 4 . + CDS 94768 - 95403 790 ## Acfer_0325 hypothetical protein + Term 95438 - 95485 5.7 + Prom 95589 - 95648 8.7 84 40 Tu 1 . + CDS 95756 - 95917 278 ## COG1773 Rubredoxin + Term 95944 - 95983 8.1 + Prom 95963 - 96022 12.8 85 41 Op 1 . + CDS 96185 - 97378 1533 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 97407 - 97456 9.2 + Prom 97546 - 97605 6.1 86 41 Op 2 . + CDS 97670 - 102061 5091 ## COG5295 Autotransporter adhesin + Term 102083 - 102127 12.3 + Prom 102230 - 102289 17.7 87 42 Tu 1 . + CDS 102423 - 102714 175 ## gi|290967956|ref|ZP_06559506.1| conserved hypothetical protein Predicted protein(s) >gi|290782006|gb|ADGP01000008.1| GENE 1 62 - 562 189 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170754849|ref|YP_001782001.1| ribosomal protein L32 family protein [Clostridium botulinum B1 str. Okra] # 1 165 1 166 166 77 30 3e-13 MKLQVERACKEKGISFSFHFEEPAAGLGDVTAFPWHDERVHVEGTYWFDGLHIVVQGIIR TRGTYTCSRCLLPVSVKREATLSEIYGTEAELPDDVLPYDGEYIDLTETIRETLILSEPM QVLCRSTCAGLCPACGANLNEEHCSCPTDTIDPRLAVLEELLRSKH >gi|290782006|gb|ADGP01000008.1| GENE 2 592 - 777 242 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371476|ref|ZP_03854960.1| LSU ribosomal protein L32P [Veillonella parvula DSM 2008] # 1 57 1 57 58 97 73 2e-19 MAVPKNRLSQTRQKMRRANWKLSVPGYVECPQCHEPVRPHHVCPTCGFYKGKQVVNNTTA E >gi|290782006|gb|ADGP01000008.1| GENE 3 911 - 1411 774 166 aa, chain + ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 158 1 158 190 143 43.0 1e-34 MRALGIDPGTAICGFGVVDAQGSRLHPVTYGTIRTSPEDTDAQRLVMLFKGLKELYATYQ PDVVGVEQLFFNRNVTTAITVGQARGIILLTAEQAGIPILEFTPLQVKQGVTGYGRATKE QVTDMTMRILGIREKIKPDDAADGLAMAIYAVYSQHSQRLKRKVQL >gi|290782006|gb|ADGP01000008.1| GENE 4 1408 - 2010 624 200 aa, chain + ## HITS:1 COG:BH1224 KEGG:ns NR:ns ## COG: BH1224 COG0632 # Protein_GI_number: 15613787 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Bacillus halodurans # 1 196 1 200 203 137 37.0 2e-32 MIGYIRGPVTRIFHEYCFIDVHGVGYRIYAPAATLAALVPERETTLFTYMHVREDAILLY GFGTQEEYDVFMLLIGVSGVGPKVALGILSAVTPEEFCAAVQRKDLKTLTRMPGIGKKVG DRILFELHDKVASLQGRIPDGADNGEDIDSGSHTDEAVEALRGLGYSESEAQTAVASVTG KDLSVEDKIRRALQVLGRGR >gi|290782006|gb|ADGP01000008.1| GENE 5 2013 - 3029 1234 338 aa, chain + ## HITS:1 COG:BS_ruvBm KEGG:ns NR:ns ## COG: BS_ruvBm COG2255 # Protein_GI_number: 16081161 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Bacillus subtilis # 18 332 20 334 336 419 67.0 1e-117 MEETRLVENHDLPGDSWQYSLRPHYLKEYIGQQQAKQNLEVFIGAAKLRQEALDHVLLYG PPGLGKTTLAGIVANEMNVSLRITSGPAIERPGDLAALLTNLQERDVLFIDEIHRLSHSV EEVLYAAMEDYALDIVIGKGPSARSVRIDLPPFTLVGATTQVGRLAPPLRDRFGVICRLE FYKPEELVLIIQRTATILNIAIDVSGAMEIARRSRGTPRIANRLLKRVRDFAQMAGETFI HEKMAASALTRLEVDSCGLDRTDRKVLEIIIEKFAGGPVGLDTIAAAISESVDAVEDVYE PFLMQQGFLHRTPRGRVVTEAAYRHLGLPLPQEASHHV >gi|290782006|gb|ADGP01000008.1| GENE 6 3068 - 4309 1234 413 aa, chain + ## HITS:1 COG:sll1283 KEGG:ns NR:ns ## COG: sll1283 COG2385 # Protein_GI_number: 16329811 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Synechocystis # 9 412 30 389 391 189 35.0 1e-47 MQVIHKISIGIVFFLGCVGVLSAAASGPGIPIRVGIREGRNAISLVSAGGLEIFSKGNLW KTVAPHMPVTISYVDNMFSIDGSSLEGPVSFQPARYQGTVRITDGYTYRGMLECIKTPGR EGMTLVNVVPLEYYLYGVVGKEMSPSWNLEALKAQAVAARTYAITHKNSYGTRGFDVMDD TRSQMYGGVNGESPSVLRAVDETNGEVLFYGNKVIDALFCSTAGGWTENSENVWGKAYGY LRGVPDFSEAMPAYRWQLSLTPERLAAVLKATGRNVGDVTGILLSPLQRRPMSVSDRGIS GRVRSLVIIGTEGKVTLSGNAFQSLLSLKSTLFDVYDGQGLLPDPDRSSVQRETLFSVTK GVPFVVYGFGWGHGLGMSQYGAYQMALSNKGIKNYYRQILSHYYTGTRIEQLY >gi|290782006|gb|ADGP01000008.1| GENE 7 4323 - 5342 983 339 aa, chain + ## HITS:1 COG:CAC2283 KEGG:ns NR:ns ## COG: CAC2283 COG0809 # Protein_GI_number: 15895551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Clostridium acetobutylicum # 1 339 1 341 341 427 59.0 1e-119 MKLSDFSYELPKELIAQHPAEPRDHARLMVYDKITGAVAHRYFYDLAAELHKGDVLVFND SRVIPARLHGKKKETGGKVEVLLLTPVGEDCWEVLVKPGKKALPGTTIEFSSRLCATVKE RTDFGGRIVQFHYDGVFDEILDQIGEMPLPPYIHEKMKNPDEYQTVYARERGSAAAPTAG LHFTRNLMEKIRAKGVETVFVTLHVGLGTFRPVEEENVEDHEMHSEFYSVTPAAAAAVNR AKAEGRRVVAVGTTSIRTLESAGKEGVVQAGSGWTDIFIYPGYTYRIADALVTNFHLPES TLLMLISAMSKREKILQAYRIAVAEGYRFFSFGDAMFIR >gi|290782006|gb|ADGP01000008.1| GENE 8 5355 - 6461 1169 368 aa, chain + ## HITS:1 COG:lin1565 KEGG:ns NR:ns ## COG: lin1565 COG0343 # Protein_GI_number: 16800633 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Listeria innocua # 3 365 4 369 379 508 64.0 1e-143 MVIRYELQAECDGARAGLLHTPHGTFKTPMFMPVGTQATVKTLTPEELYAMGAQIILSNT YHLFLRPGEELIRQAGGLHAFMHWQQPILTDSGGFQVFSLGQMRKITEDGVTFRSHLDGS RKFLSPEVSMDVQMALNSDIAMAFDECIPYPSDYDYTSQSTARTSRWAQRCLQHHHSPTQ GLFGIVQGGMYKDLRARSCAELVAMDFDGYGIGGLSVGEEKSLMYDILEYTVPLLPKHKA RYLMGVGTPDCLLEGVARGVDMFDCVYPTRVARNGMAMTKTGRLTVRNAKYAADFVPIEE NCDCYTCQNYTRAYIRHLFKAEELLAYRLVSIHNLHFLLHFMRDLRQSIVDGTFREFCRQ FRRVYRDR >gi|290782006|gb|ADGP01000008.1| GENE 9 6689 - 6958 362 89 aa, chain + ## HITS:1 COG:BH1229 KEGG:ns NR:ns ## COG: BH1229 COG1862 # Protein_GI_number: 15613792 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Bacillus halodurans # 12 87 10 85 88 73 46.0 1e-13 MNMLNQAQQFWPLIIMIVIFYFLLWRPQKKQQRRRQEMMNSLKVGAKIITAGGIYGVVTA TKEDVVEIRIAEKVEIKISRSAVSQVVGS >gi|290782006|gb|ADGP01000008.1| GENE 10 6963 - 7532 416 189 aa, chain + ## HITS:1 COG:VC2479 KEGG:ns NR:ns ## COG: VC2479 COG0212 # Protein_GI_number: 15642475 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Vibrio cholerae # 6 186 5 193 194 86 30.0 3e-17 MKATYKNFIRTVMKSRLANMGQERQAVDSQTICQRLCRLSAYHKAQRLMIFLACSGEVQL DRLAVQARHDGKEVWVPRCRPGGFMEAVPLVSLQRTVKGLYGIRTVADEIPAVTKTPDLI IVPGLAFDRHGRRLGRGGGYYDRFLRSYPEAVRIGVAWDCQIMAQVPVSGWDRRMDAVLT PRRYWQAEK >gi|290782006|gb|ADGP01000008.1| GENE 11 7557 - 8858 1782 433 aa, chain + ## HITS:1 COG:FN0699 KEGG:ns NR:ns ## COG: FN0699 COG0342 # Protein_GI_number: 19704034 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Fusobacterium nucleatum # 8 419 4 405 411 321 43.0 2e-87 MQTRNIIKFFVAVVIILAAFFTLVFPPTKSMRQGTVLPFAVVKPFPDSIKQGLDLQGGTH IVLEAEDSPGAPVTEDSLKRAVSIIERRINEMGLTEPLVQQEGAKRIIVELPGEKNPEKA IETIGKTAVMEFKDENGDTHLTGKDLKTAKEEIDNGHKNVVAIEFTDEGAKKFADLTGAN VGHHIAILLDGKVLTNPVVNEPITGGKAVITGSKTLEEAKNLAVLLRSGALPVKLKVMEV RTIGPSLGQDSKMKSEKAFAIGIILIMIFLIAVYRIAGIVANLALLVYVVILLGLLKYLD ATLTLPGIAGIILSMGFAVDANILIFERFKEEVLIGKSLRSSMEAGFKRAFSTILDANVS VMIAAIVLMVMGSGTVKGFAVNLALGIIVSMFTAIVISRSLLTWFINTGLVSNPRWYGLN RPVPEHLKKGGRK >gi|290782006|gb|ADGP01000008.1| GENE 12 8855 - 9814 902 319 aa, chain + ## HITS:1 COG:BH1237 KEGG:ns NR:ns ## COG: BH1237 COG0341 # Protein_GI_number: 15613800 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Bacillus halodurans # 4 308 9 308 311 184 33.0 3e-46 MSFDIVKHRKWWFSLSAILVLLSLISIFVHGFNFGIDYTGGTILDMQFKQEVTVAQVRTV VDHSSIKLGNTVIQLSGVTDQSASKEVMLRMRNLTTEESKTVAQELNDKLGGAEVKRTES VGAVIGSEVTKNAILNLAVAFIVLAAYISFRFEYKIAVSAIISILHDLIMVLGVFSFFHL EIDASFLAAILTVIGYSMNEAVVIFDRVRENTRTHRRTDSYEKLAHDSIAQNIHRSFYTL ATVLFACGALHFFGGESTKNFSLVMLIGFISGAYSSICVDTSLWVVWKNHVNGKRGMQPL KPKHAEEETYEEFEEIEEE >gi|290782006|gb|ADGP01000008.1| GENE 13 9901 - 10224 480 107 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1221 NR:ns ## KEGG: Acfer_1221 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 28 106 33 111 112 101 59.0 1e-20 MWKKLWMLLVLLIGIPSYILAVGAVTPDGYCRGIYLAGKVKVVPYHGDLRVKVVGSFPDL RVQRVRSFPQHVGEWQYVEYGQDFTIQYVEVFPDLRIQFVRAFPGVV >gi|290782006|gb|ADGP01000008.1| GENE 14 10346 - 10885 714 179 aa, chain + ## HITS:1 COG:MA4340 KEGG:ns NR:ns ## COG: MA4340 COG1268 # Protein_GI_number: 20093128 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 8 169 17 182 187 112 43.0 4e-25 MQDSVRTRSLTGMALLVALNCISAYIIIPLPFTESPLALQTLVVNLVGFLLPTKKAGTVM AVYILLGLIGIPVFTGGTAGFGKMFGPTGGYIWGFLVAAVLISYFKGKQYHFKRYGAVSI GIGIPVIYIMGAVQLQAVTHMPWIHVVAIGVLPFIPLDIVKCLAAAGIAGAVKRRMTVS >gi|290782006|gb|ADGP01000008.1| GENE 15 10986 - 11693 979 235 aa, chain + ## HITS:1 COG:BS_deoD KEGG:ns NR:ns ## COG: BS_deoD COG0813 # Protein_GI_number: 16079021 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Bacillus subtilis # 1 233 1 232 233 278 57.0 7e-75 MSLHIAASAGEIAETVLLPGDPLRAEYIAKTFLKDAKCYTKVRNMFGYTGTYKGKKISVQ GTGMGIPSISIYVHELIRDYGAKTLIRVGTCGAMRSDIHLREVIIAQGATTDSSIIQNIF GPSIQFAPLADFEVLRTAYEKAVQEHIPVRVGNVISVDRFYDEEINNEKLTQYGIMAVEM ETAGLYVAAAKYGVSALGLFTVSDHLLTKEACTAEERQLSFNDMIRIALETAAAV >gi|290782006|gb|ADGP01000008.1| GENE 16 11708 - 12037 530 109 aa, chain + ## HITS:1 COG:aq_853 KEGG:ns NR:ns ## COG: aq_853 COG0720 # Protein_GI_number: 15606204 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Aquifex aeolicus # 2 107 3 112 114 72 40.0 2e-13 MYTVRKRLEISAAHHLQLDYESKCTHLHGHNWIIYVTCQAETLDKNGMVIDFKQIKELVH AKMDHQDLNEIFSFNPTAENIAKWICDTVPHCVKAEVRESEGNVAVYEK >gi|290782006|gb|ADGP01000008.1| GENE 17 12027 - 12659 489 210 aa, chain + ## HITS:1 COG:CAC3625 KEGG:ns NR:ns ## COG: CAC3625 COG0602 # Protein_GI_number: 15896859 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Clostridium acetobutylicum # 7 210 5 221 221 174 47.0 8e-44 MKNKLYVNELFNSIDGEGRRAGELASFIRLCGCNLRCSYCDTTYAFTEGTPMAVEEILSQ LQYRNITLTGGEPLLQDVHLLLQRLQDRDVNIETNGSVSIRPYLSYSHVWFTVDYKSISS GMTTAMKEENFQLLRPQDVLKFVVGTHADLEQARKICAYFNPSCPIYISAVFAAIEPKEI VAYMEAYRLMNWRLQLQLHKYIWPPTARGV >gi|290782006|gb|ADGP01000008.1| GENE 18 12805 - 13638 1058 277 aa, chain + ## HITS:1 COG:no KEGG:Mthe_0610 NR:ns ## KEGG: Mthe_0610 # Name: not_defined # Def: pyridoxamine 5'-phosphate oxidase-related, FMN-binding # Organism: M.thermophila # Pathway: not_defined # 94 268 130 315 323 131 37.0 3e-29 MANTLFMYEGEHAQRVACMMSSIVCMGRYVKIGSNIAMTPYARLVLVIEESDLANPGLLT LPEKHPQWLGLVLVGETPEKMMNIPDLGEFSFTAFVDRKVLDQDAIVAGEGLARAVRTKH TNDPEVLKAIEDFLHHHNTGALATGWGEAVHSTPIEYIYHQGKLYIFSEGGRKFAYLYRN RHVSMSIFDPFTGFKTIAGLQLDGTVRFIEPGDAEYDGIAAARGIAKERLDKMAVMLHVI EITPHKAHFLWGEFGKRGKAPTQVYTFPGSPREQDGE >gi|290782006|gb|ADGP01000008.1| GENE 19 13642 - 14649 1002 335 aa, chain + ## HITS:1 COG:alr2189 KEGG:ns NR:ns ## COG: alr2189 COG2207 # Protein_GI_number: 17229681 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Nostoc sp. PCC 7120 # 181 330 179 333 341 84 34.0 2e-16 MAAKKDGIKRSYKEGRKHKETMKGMNDMRLIEETKERTVVSFENEEGKVILTRCPIFPGV DILYIDAHIECFSFCAPPVPHVFAINHCEEGRVECQFNNGEYLYMGHGDMSISWRDHHEY CHTAFFPSAFYRGLSMKISVPQAEPCIRQLLGEPQFDLGALCNRFCKNAAFGMIMEATPN MEHLFYELYHVPESIHLRYSRLKVLEVLLFLGTLDTEFEEKRIYLTKSQVDIVKAVHNSL TENMQQHVTIDDLAKKYGIAPTTLKRCFKSVYGSTIGQYIKDFRIAIAKRLLETTDASIL AIANQVGYENSSKFSVAFKKVTGALPKDYRKNFQQ >gi|290782006|gb|ADGP01000008.1| GENE 20 14721 - 15545 735 274 aa, chain - ## HITS:1 COG:CAC0629 KEGG:ns NR:ns ## COG: CAC0629 COG0561 # Protein_GI_number: 15893917 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 4 274 2 268 268 123 31.0 3e-28 MKQYKLIACDMDETLLNTDASICQRNITAIKEATARGVYFVPCTGRGFRSIEKILKILDL YNCADQYVISFNGSCITENRNCHSLYWRPLPFALADTLYQFAIKYNLCQHIYTREHVYLR GLTPDEKAFLHGRMSYTITDAADLAFLRRHEEIAKLIITHTDPRVLQHIYEEMKPLLHGI DITFSSNRYLEFLPAHENKGTGLLRLAALLGIDAAQTLAIGDNINDIEMLQAAGLGIGVH NLNPKIRPYCKVITDADNNEGAVGEAIERFILSR >gi|290782006|gb|ADGP01000008.1| GENE 21 15620 - 17128 1524 502 aa, chain + ## HITS:1 COG:lin1985 KEGG:ns NR:ns ## COG: lin1985 COG1109 # Protein_GI_number: 16801051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Listeria innocua # 2 494 4 494 503 424 48.0 1e-118 MSYTYEFLKLQNGSDIRGVAVAGVPSEEVTLTPAVVEKIGAAFVRFLRSHRCEEKKSLRI AVGHDSRISANVLEKAVVQGLCAQDATVFLCGLASTPAMFMSTVFEDMKMDGAIMITASH LPYNRNGLKFFTRQGGLEKEEIKEILRAAARSERIEKKTDSRVYPLALIPAYAAYLRKKI ATGLGCSEADRPLQHMHIVVDAGNGAGGFFAEQVLAPLGADIEGSRFLEPDGMFPNHVPN PEAKAAMAAIQQAVRDSHADLGLIFDTDVDRMSAVLHDGEPINRNKLIAMMAAILAPQYA GSTIVTDSVTSDELTAFLEDTLHLVHHRYRRGYKNVINECIRLNDAGTVSPLAIETSGHG ALKENYYLDDGAYLAVKLIVAVTAAKEAGKDSAHYIAALKEPLESCEYRLAIRETDDAPG YGKLVLAVLKQRAEEIGIHAAEPSYEGVRLLFDHGWALLRMSLHDPQMPLNLESRKVGGC REMGKIIKSLLKGFAYLDVSEL >gi|290782006|gb|ADGP01000008.1| GENE 22 17510 - 18421 894 303 aa, chain - ## HITS:1 COG:BS_ywbI KEGG:ns NR:ns ## COG: BS_ywbI COG0583 # Protein_GI_number: 16080882 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 295 1 290 301 247 41.0 2e-65 MDFHHLKYFVEVADKKSFSKAARTLHISQSAISRTIKALEEELGVVLFMRNAKAVELTDA GTIFLSHAKRVVFMFEHLKTDFENEFKLEQGTVLIGLPPITGAPIFANLLGAFKQEYPQI ELDLYEHGSKKVEVSVQEGLIDLGIVCTQPKEKEFESFFLTQDPMNVIIHRDNPLSKEKH ISLKQLANESLVLYRDDFNLHDEIIQQCKKIGFQPKIVFETSQRDLMIQTVVANLGVALL PSRLCPTRETNPRTTESVVVRPLTDPEIMHVVYVIWKRGHYLSHAAQLWLDFVRNKSRVI SNL >gi|290782006|gb|ADGP01000008.1| GENE 23 18867 - 22388 3486 1173 aa, chain + ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 1 413 1 412 413 568 65.0 1e-161 MSKFKTMDGNEAAAWVSYAFTEVAAIYPITPSSPMAEHVDDWAAAGMKNIFGHTAKVVEM QSEAGAAGTFHGSLQAGALTSTYTASQGFLLMIPTMYKVAGELLPGVFHVAARALANHAL NIFGDHQDVMSARASGCCLLAESNVQEVMDIGGIAHLAALKGSLPFINFFDGFRTSHEIQ KVEVMDFDNFRKLVDWDAIKRFRERGLNPDNPEIRGTAENPDIYFQHTEANNKFYDAMPD IVADYMDKISELTGRDYKPFNYVGAPDAEYVIVSMGSLSDVAKKTVEYLVKKGEKVGAVN VHLYRPFSNKHLLNVLPKTVKKIAVIDRTKEPGSLGEPLYLDIVGFVTEEKLDIQVIGGR AGMGSKDVLPEDMYSVFEELKKEHPLNGFTLSIVDDVTNLSLPRAPKIKFDTTGLTSCKF WGFGSDGTVGANKSAIKIIGDHTDMYAQAYFAYDSKKSGGVTMSHLRFGTKPIDMPYLID AADYIACHRQSYANRFDLLRGIKEGGTFMLNCTWTDEELDHELPAKLKRDIARNHVKFYT LNGDAIGQKLGLGTRINMVMQAAFFALAKVIPLEDAVKYLKDSIVKSYGKKGQKVVDMNW AAVDAGIGEFHEVHYPESWADATDEVVEGRPTTAYFKNIAAPMLGQIGDDLPVSAFEGRE DGTMPSGTSKYEKAAPALHVPSWDAEKCIGCMQCSFVCPHATIRPSLTTKEETAAAPAGY KVAPKARAGKQYDVAIVVDQDDCLECGSCVDVCPVDALTMVPNVDTERAKMELWYYATEK VTPKENPQKKTTVIGSQFETPLLEFSGACAGCGETPYAKLLTQLFGDRMMIANATGCSSI WGASAPVSPYTMNEKGHGPAWANSLFEDAAEYGFGMFMGVHKVRHDLVARVDEAKAVASA ELQAALSDWAANVDEGEGSRERADKLTALLEAEAEGKPVLEEFLGKKKFFVKRSQWIIGG DGWSYDIGYGGVDHVLASDYDVNVLVLDTEVYSNTGGQSSKATPTAAIAQFAASGKRTKK KDLGMMAISYGYVYVAQVAMGADKNQLMKAFTEAEAYHGPSLLICYAPCINHGIRKGMGK SQLEEKLAVECGYWDLFRYNPDLKAQGKNPFHLDSKTPDYSKFQEFLQGEVRYASLQKAF PEEAAGLYAKTEADAKARRETYVRFQQGFDAQA >gi|290782006|gb|ADGP01000008.1| GENE 24 22558 - 23028 450 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967890|ref|ZP_06559440.1| ## NR: gi|290967890|ref|ZP_06559440.1| putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] # 1 156 1 156 156 310 100.0 2e-83 MKGYKGIVLTLAGIVIMLIVSACATADPYAGKWVGYYEPKANVIYLATIEKKGRAYTVSM QDQHWQGIGKNRSWQTDTQPSATGQVKNGKLYIDHTLDLLYFIVPQEADTLLYINRPGNA VIRFHREREGEIRAFKEKWRTAEEKNGTAVAGKQKQ >gi|290782006|gb|ADGP01000008.1| GENE 25 23107 - 23652 808 181 aa, chain - ## HITS:1 COG:CAC3597 KEGG:ns NR:ns ## COG: CAC3597 COG1592 # Protein_GI_number: 15896831 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 180 1 180 181 254 72.0 8e-68 MKKFVCGICGFVFEGNSAPEKCPQCGAPQNKFTELSAGKKEYADEHRVGIANGVDEKIIE GLRLNFTGECSEVGMYLAMSRVADRQGFPEVAEAYKRIAFEEAEHAAKFAELLGEVVTDD TKKNLEMRAAAEQGACEGKKELATLAKQLNLDAIHDTVHEMAKDEARHGRVFDGLLSRYF A >gi|290782006|gb|ADGP01000008.1| GENE 26 23937 - 25409 1700 490 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0646 NR:ns ## KEGG: Vpar_0646 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 27 301 24 300 370 134 35.0 9e-30 MWQKKIAAMMTVLSICGVMAVQGADYTILEKTERVETTVYGTPQTGALQARAAALDSVLN GTGRGHAGLQEEIDAMYKDVYGNAGDYLSLLSTVNLLQGKYARVITDEPLTVRVENLEEG ILGHAGSGPLTTRVAVLRRLLLGNKRYVAQGIPLPAGTVIPVKLLDALDSRTAQTGDIVR FAVLQPIKIGDMEVIPEGMTLDGTVTKVRKAKRFGVDGKITLQFHQLRAIDGTLINVKEA DRNTEEYKHAVGAAGASAAGALVLGPIGLVGGLFVHGNEAVIPTGTVMYVQTVRTVETMG IKRDGIIDRMQSADLVAGSINTDAILPVPLPVAPLQVPVTPKKAAVQTDTMSTAPVTTPV QPSVPDISTNGTEPVANVAVLAPAPVPAVATAAVRGAGLPAVPQEGQKPSFSSGRVPVPA AATAGSGREAVTVNTAVQDPYTKPLTPKKNDIQEKQPVSTSKKQVVSGNDDEIVVTIQPT RKDSNHVQKK >gi|290782006|gb|ADGP01000008.1| GENE 27 25393 - 26802 1212 469 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0647 NR:ns ## KEGG: Vpar_0647 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 23 469 66 517 517 182 28.0 3e-44 MYKRNKIGIVIGLASIYSMSWSAGMAATEQQEPLQLQADTIAIRDGDGYMMSRGNIEISQ GANRIEADYLRGNRYTGKYDFPGKMMYTYGTGLMKSTDVTYDRRRQEGAATQAEGYDPSG LIFFRGTGVSVHGDTILLKKGLLTTPHAVADVPDYYVTGDNIIVKKGQKITMDNARFWVK HSCVFSYGHYEKKIGGNQQSVPWAVTLFPKPSHTEKGGWGFGGYANFALNEAGTWRLESQ YRWSVRSHFAPSVKLSHYSPWGRLRFAYSKETSDNNEDPIWITKFPEWEYQSPKVYLGNT GVFFSANASWGNWRESAARTGRHSGVHGIISHVPWQPWPKAQIQAYAGYRQDWYALEQAQ RRDTYMGVVVTQRIHPQAWVTGWYKRHRITGYTPYRFDRIAHPRQSGISFAYAPHKKDVL MYTLARNSDTGALDARIYTWIHDLHAAIMRVTYKQLEGHWEVLFKTKDF >gi|290782006|gb|ADGP01000008.1| GENE 28 26949 - 27032 85 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHVGINTKLVISLGILLSYAFILNHI >gi|290782006|gb|ADGP01000008.1| GENE 29 27367 - 27942 638 191 aa, chain + ## HITS:1 COG:no KEGG:Nwi_2333 NR:ns ## KEGG: Nwi_2333 # Name: not_defined # Def: hypothetical protein # Organism: N.winogradskyi # Pathway: not_defined # 26 140 18 138 345 68 38.0 1e-10 MDLWEAFRQSDKNRTRTEQMYDDAFALCNSPALQNETLAPAERTAVENGLPCDRLPEGTG PFGTAATNPIPVNGSFGEWMYLSRLRILATGSKVFFHKWKTDGVVDAFEVINRSGTLRTV LYFSPRHPYASRYCPEGYILEREAVFPRGITTHSSCFPRGLYKEIKKEARRRLGIEVAEE ESKYIEAEIKQ >gi|290782006|gb|ADGP01000008.1| GENE 30 28000 - 29244 1108 414 aa, chain + ## HITS:1 COG:RP064 KEGG:ns NR:ns ## COG: RP064 COG0232 # Protein_GI_number: 15603943 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Rickettsia prowazekii # 34 413 24 377 383 134 28.0 3e-31 MNRAFAAVRMDERHPHWQQAIAREKRLYHRRGDFRTEFGRDYTRIIHSTAYSRLKHKTQV FFTTKNDHICTRIEHVNQVASVSQTIGRYLGLNTELIAAIATGHDLGHAPFGHLGERVLR AICKEDLGTSFWHERQGLRVVDGIETLLDPAGRTVNMLLTYAVRDGIINHCGEVREAVLR PREEAIPLQSITHPGQYEPYTWEGCVVKISDKIAYLGRDIEDAVRLKIIDENGTPARALK ERLQNKFHIVLPSLTNTSIMYPLITDLCSESTPEKGLLLSKKNIHLMNDVMNFNYRYIYR HKRLQIYHEYAKLIIQSIYYTLRDCYAGEKTLQRIREMSEYYPTLGTHFLERLQKFSDIG RAETKQDRFGNVFKNTVLYAIGTEEKAYKAACVDYIAGMTDRYAEKIFTELTTF >gi|290782006|gb|ADGP01000008.1| GENE 31 29257 - 29484 235 75 aa, chain + ## HITS:1 COG:CAC1208 KEGG:ns NR:ns ## COG: CAC1208 COG4728 # Protein_GI_number: 15894491 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 6 72 78 144 173 60 41.0 1e-09 MRENPKAHEIWRHFKNNDYEIITVAEHTETGEKFVIYKPVNNPERHYARPLRMFMSETDM RKYPKAVQRYRFEKK >gi|290782006|gb|ADGP01000008.1| GENE 32 29562 - 29768 410 68 aa, chain - ## HITS:1 COG:no KEGG:Acfer_1310 NR:ns ## KEGG: Acfer_1310 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 2 68 3 69 76 89 68.0 4e-17 MEITKDTSIIEAVQKYPQIVEIFQDYGLGCVGCMAAHFETIGQGAGAHGIDIDALIADIN DSINDPEA >gi|290782006|gb|ADGP01000008.1| GENE 33 30010 - 30441 549 143 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1586 NR:ns ## KEGG: Vpar_1586 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 2 141 1 139 152 110 40.0 2e-23 MLKPVVVKIHSIQQDEIGKKTEFELVSTGTAHVQGDTQYIRYDERMMSEMDGVNTLVKVF PDQSISLVRTGKIHQHHDFRKGQEEDSIYALEDGDFQLHTKVYECQVDMQDGIGTIHLEY NLSLEGMFYNYTKLTITVQEDRA >gi|290782006|gb|ADGP01000008.1| GENE 34 30441 - 32105 2239 554 aa, chain + ## HITS:1 COG:BH3808 KEGG:ns NR:ns ## COG: BH3808 COG0018 # Protein_GI_number: 15616370 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Bacillus halodurans # 1 554 1 556 556 538 48.0 1e-152 MDIKEAVIQGIRTAMDKAVAAGKLPEGDYPDIVLEIPPQKEFGDFATNIAMQSARTAHCA PRHIAESIVEELKAPWLDKAEVAGAGFINIFLDSRVFYQVLQHILTVQEAYGTCAERPED TVQVEFVSANPTGPLHVGHGRGAAYGSSLVNLLRMAGYKVEAEYYINDAGKQMDNLAASV NARYLELFGRKAEIPENGYHGQDIIDTAKAIAAQDGDRYLQVSEAERLAIFKDRAYEEKL KALQKDLARFHVQYDHWFSERTLHPQGIRQACDALRERGKVYEKDGALWLQSTAYGDDKD RVVIRENGDPTYLAADIAYHKNKYDRHFKTMINIWGADHHGYVARVRAAMAALGYDTKRL EVLLLQMVSLFRDGKPVKMSKRTGQAITLNELIEEVGTDAARYFFIMRSLDTQLDFDLDL AMSHSNENPVYYIQYAHARIYSIYRQAEEAGIALPQRWEAVQWDLLQEEAELALIKKMAA FPEEIQRAAAARAPHRIAHFVYETAGLFHAFYNHCRIIQEDRELAIARLGLVTAVRFTIA NSLAVLGISAPQQM >gi|290782006|gb|ADGP01000008.1| GENE 35 32168 - 33787 1800 539 aa, chain + ## HITS:1 COG:CAC2892 KEGG:ns NR:ns ## COG: CAC2892 COG0504 # Protein_GI_number: 15896145 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Clostridium acetobutylicum # 2 536 3 535 535 772 68.0 0 MTKYIFVTGGVVSSLGKGITAAALGRLLKNRGFKVTIQKFDPYINVDPGTMSPYQHGEVF VTDDGTETDLDLGHYERFIDINLGKNSNVTTGKIYWSVLQKERHGDYLGHTVQVIPHITN EIKKRVVRVGDDDNADVVITEIGGTVGDIESLPFLEAIRQIKKDVGKNDVLYIHVTLVPY IGAAGELKTKPTQHSVKELRGIGIQPDIIVCRTERPLSEEMKEKLALFCDIDKEAVIENK TLKSIYEVPLLLAEEGLDRIVLDKLALPNKPCDMTDWKKMVHDIYHTEQELDIALVGKYV SLHDAYLSVAESLNHAGFANKTKVNIHWIDSETLEDPQVSAATVFAGIDGIVVPGGFGNR GVEGKISAVQYAREHKIPYLGLCLGMQCAVMEFARHVAGIAGATSSEFDEAAVNPVIDLM PDQVDIDNKGGTMRLGVYPCKVKEGTKAFSVYGEHLIYERHRHRWEFNNKYRTQLVDAGL ILSGTSPDERLVEIVELKDHPWFVGCQFHPEFKSRPTKAHPLFNGLIEAALQVKQKNKK >gi|290782006|gb|ADGP01000008.1| GENE 36 34398 - 35738 1646 446 aa, chain + ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 4 439 19 449 451 383 48.0 1e-106 MLNTFKRGGVHPADGKGLARDKAIETPVLPKKVIIPMSQHFGAPCKPVVKVGDMVKKGQL IGTSDAFLHADIHASISGKVVKVAPMPHNTMVTCMSVVIESDGLDEWAEGLPLHRDWEKM SKEEILDAVKACGIVGCGGATFPVHVKLTPNKPVDSFIVNGAECEPYLTCDFRSMVEAEP TRKFVTGVQICMKVLGVKKGYIGIEDNKPEAIANLTEAFRQVPEVTVVTCKTKYPQGAEK MMIEACTGRLVEPGGLPMNVGCVVSNVGTVIAITDAVCYGIPLIERVTTVTGDCIAEPKN LRLRIGTTYEEAIQHCGGFSQQPDRVIAGGPMMGFAQYQLDIPITKGASGILALSSVKCD VGEEEPCIRCGRCVDACPMGLVPSQLSIFSSREAWDECRGYGVMNCVECGSCVYVCPAKR NLVQYFRNAKGQLKAIQQAAQKKAAQ >gi|290782006|gb|ADGP01000008.1| GENE 37 35767 - 36792 1035 341 aa, chain + ## HITS:1 COG:FN1595 KEGG:ns NR:ns ## COG: FN1595 COG4658 # Protein_GI_number: 19704916 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Fusobacterium nucleatum # 23 339 10 313 314 253 44.0 3e-67 MSPEAKGQMAGTDTKGNFTVSSSPHVRSKESISKIMWSVVAALVPAAAFGVYYFGMNGLV NIIVAIVSAVIFEFLWEKMMHKRVTIADGSAVITGLLLAMCCPPSLPWWMSVIGSFLAIV VCKQSMGGLGYNLFNPAHVGRAGLMVSWPVAMTTWTQMNGSVVDGVAGATPLNVLKHGGT EALFNLFGTNDWAAIYKSMFFGFRGGSLGETSTVLLILGGLFLIYRGYIKWQVPVIMIAT VGILMGLVAGDAHLAVFHMMAGGLIIGAFFMATDMVTAPITLKGQMLFALGCGIITVLIR LLGGYPEGVCYSILLMNALTPLIDRVVKPKVFGAVKTKGAK >gi|290782006|gb|ADGP01000008.1| GENE 38 36794 - 37348 828 184 aa, chain + ## HITS:1 COG:VC1013 KEGG:ns NR:ns ## COG: VC1013 COG4659 # Protein_GI_number: 15641028 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Vibrio cholerae # 70 175 80 190 209 66 38.0 2e-11 MTENKGNNLVKIAMNLILTCLVSGCIIGAVFFITGPTARAKAEQMKEESMRGLVPQAEKF TSVAGEKDTFVAEKDGKKIAYIIPTAPKGYGGPIKLLTAVSTDGTVIDYVALEANETPGL GDRGAKEPFKSQIKGKKEASLEVTKDPSQKDKVQAMTGATISSRAFTLGVKQAVEKAAQM GGKS >gi|290782006|gb|ADGP01000008.1| GENE 39 37348 - 37971 995 207 aa, chain + ## HITS:1 COG:FN1593 KEGG:ns NR:ns ## COG: FN1593 COG4660 # Protein_GI_number: 19704914 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Fusobacterium nucleatum # 6 191 6 191 205 165 49.0 6e-41 MNLWKVFSRGIIEENPYFVLALSLCPGLAVTTSVINGLTMGLTVWFVITSNNVVVSIIRR TINKKVRVPVYITCIATIVTCVQLVLQAYAPELYKALGVYLDLVVVFAIILARAESVASK NGIVVSFLDGMGMGVGFTGAMLIISVVRELFGNGTLLGIPMFGPSYQPALILALPPGAFM LIGFFMAGIKMWNNAREKAKQMKGSEG >gi|290782006|gb|ADGP01000008.1| GENE 40 37971 - 38546 842 191 aa, chain + ## HITS:1 COG:VC1017 KEGG:ns NR:ns ## COG: VC1017 COG4657 # Protein_GI_number: 15641032 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Vibrio cholerae # 1 191 21 211 213 163 50.0 2e-40 MGEYFTLFIGAVLINNFVLTKFLGLCIFFGVSKNLNASIGMGFAVTSVITMSTVLAWLLY NYVLMPLDLTFLRTISFVVLIASFVQLLEIVIKKMSPTLYNMWGIYLMLIATNCIVLSVP VISITNHYGFLENLVFAVGSGLGFALALVLMASCREKLDYAAVPEALQGTPIAFIVAGML ALAFLGFSGMI >gi|290782006|gb|ADGP01000008.1| GENE 41 38571 - 39419 1001 282 aa, chain + ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 4 267 2 261 264 173 39.0 3e-43 MEYTQIAISAVAIMTCIGVVFGFILAFADKKFAMEENPLIGEVEEALPKGQCGACGFAGC AKYAEAVVLDPEVAPNLCVPGKKEVADIVANLTGKIAEETEPQFAHVRCRGGLGIAKVAF EYKGIHDCAAAKLVQQGPKFCKFGCLGFGNCVRSCPFGAMTMGENGLPVVNKSLCTGCGK CAGVCPNHIIELLPMSAPVSVGCSSKEMGAAAKKNCSSACIGCGLCMRNCSHEGGVKVVD HLAVVNPAICHSCEEATCITKCPTKAITAMLESHLVSEEKIG >gi|290782006|gb|ADGP01000008.1| GENE 42 39424 - 40485 1356 353 aa, chain + ## HITS:1 COG:lin2785 KEGG:ns NR:ns ## COG: lin2785 COG1477 # Protein_GI_number: 16801846 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Listeria innocua # 4 351 3 355 360 204 36.0 3e-52 MRGKRRIIGWILTAFLVIAGCSGCGKTQTEQFFDRNGVAMDTTVSLRAAGGDAQGALQES MDFINRLDRLAGTNHADSDVSKINAAAGKSYVAVDPDVYEMISFAKTYSEKSRGAWDISV GIFTKLWDIGNPDEHIPVPAEIQKHLSYVNYKDILLRPSDHAVMLAKPGMYIDLGGVAKG FAVDEILKIYKKHKVTNGLINLGASSMYAMNTNAKGTAWNIGIKHPRVQEDGTYLGIVKI QDQFLSTSGDYERYFIKNGVRYHHIFDPKTGYPARHGVMSDSLVIQGDVPHGGMLSDILT TVVFVLGPEKGLAFIENTPGVEGEITGTDGTVYMTKGFKKNFSDLHPDFHLAQ >gi|290782006|gb|ADGP01000008.1| GENE 43 40632 - 41072 442 146 aa, chain + ## HITS:1 COG:mll9538 KEGG:ns NR:ns ## COG: mll9538 COG1522 # Protein_GI_number: 13488398 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 1 141 6 148 155 105 34.0 2e-23 MDHIDDKILTILKKNGKASATEISKVVGLSIPAVAERVRKMEHGGVIQGYGAKISRRKTG YNVTAFIMVNLERSGEVEEFRDSIIRFPQVLECHHIVGAFDYLLKVLVKTPDDLEHFLMD ELNEIPTVASSQTFMCLSTIKEEWNV >gi|290782006|gb|ADGP01000008.1| GENE 44 41210 - 43111 2081 633 aa, chain + ## HITS:1 COG:BS_ydiF KEGG:ns NR:ns ## COG: BS_ydiF COG0488 # Protein_GI_number: 16077662 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 632 1 638 642 429 39.0 1e-120 MGSIKVQKLTKSFGIHTVFKDVSFELHRGERLGLIGANGAGKSTLLKCLIGEEEYDDGNF IVSAGETVGYLQQNITYDAGLTLRQLLTEAWQDVLRLEKQLKETEQVMRERPQDTELMGR YARMQEKFEWLGGFAYESMSRKIVQGLGFSAADMERPVQEFSGGQKTRINLAKALVRRPD YLFLDEPTNHLDVDMLEWLETYLLSYEGGILIVSHDRYFLDRVATGILDLTDGGVKKYKG NYTQYKIQYRQQRDALEKAYQKQQEHIRETEDYIRKYKAGIKAKQARGRQSQLNRLERID LNPEAATLKFSFSPAVESGQKVLVLDDVCGGYTGKPLFSHLSLSIRRGETVALVGANGTG KTSLLKLIMGETTPTSGHIVWGSRVQPGYFSQEHTEFNGRTTVLAEIMDTFSYGEEEARS VLGRFLFRGDEVDKTIGALSGGEQARLALLKLFLQGPNFLILDEPTNHLDIPTREILEKA LLDFGGTYLVVSHDRYFLDTIAGRTLVLENRTVKEYLGNYSYYREKRQEEQQAAQEKAEP ATAIPKKKEATGKIRASEHIKKSAPSSYGKEKQLETIEMKIAELEATVKMYEVQLSLPEN MADSQKLMTLNEQYEKTVEALQQAYEKWETLAE >gi|290782006|gb|ADGP01000008.1| GENE 45 43265 - 44674 1633 469 aa, chain + ## HITS:1 COG:CAC2542 KEGG:ns NR:ns ## COG: CAC2542 COG0277 # Protein_GI_number: 15895804 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Clostridium acetobutylicum # 1 465 1 465 467 284 34.0 3e-76 MQTHFNPVTPEVLAALRQAVGDKYVKTDEDCLTAYQTDEEGNSHFFQKPEVVVFPGTTEE VAQIVKLANTYVVPITPRAAGTGVACGAIPIYKGIVVELERMNKILTLDAENMYAVCQPG VLTGDLQREAKKYGLLYAGDPSSSDSCQIGGNVANNAGGNKAVRYGTTRHQIYSLQVVTP TGEIVTVGGRLQKCSSGLCLEQLIAGSEGILGIITEITLRLRPLPPYAFNMVCVFTDDTV AFALPNKILKAGINPTSIEYMDREALQMTCKFLDMSMPHVQEGCSYVIVTVETFDEAELD RKMEQLCDLAEQNGSIDEFEADKRIWTLRKQFAEAARNIDKMYQAEDFVVPLDKISAITA QLPELREKYDLYCVTVAHIGDGNIHVLPLNNKGLSPEAWFEKIKEFHRDLFPRVYALGGK MSGEHGIGYKKRDEFARCTSAEELQLIRSIKRAWDPKQIMNPGKLIAVE >gi|290782006|gb|ADGP01000008.1| GENE 46 44994 - 46514 1857 506 aa, chain + ## HITS:1 COG:BH3898 KEGG:ns NR:ns ## COG: BH3898 COG4670 # Protein_GI_number: 15616460 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Bacillus halodurans # 3 505 4 514 525 370 43.0 1e-102 MIKFITPREAAHLVADHATVAMSGHAGFGTADAILQALQQQYALTGKPAQLTLVKVAGAG DGGRRGGDRLAAPGCIRTLITSHVGLEPKLAEAIRTERCLAYMIPAGTIFRLYQACARGE NGFLTEVGLGTTADPRYEGSCGNARTRKEGKPLVSVETVQGKEYLYYRTFPIQVGIIRGS IADETGNISLEHEDMIGEQLQIAMAVKQSGGIVLVQVADLVRRGKLDPRQVTIPRHLVDY VTVVRQRDVWTEIVPDPDGGRPHEPLTVRKICARRAALELQPQELVNLGIGMPESIGSVL AEEGMESRIISASDSGVIGGVQLTGPEMGSALYPEAMIPMADMLSLCNGGGLDVCALGLA ETDYLGNVNVSRFNGCVVGPGGFIDLTRQAKKIIFLGTFTAVGLQAHCERGTLCITQEGR YHKFKKQVEEITFSGVAAKQRGQKVLFVTERAVFTLTPAGWLLTEVAPGVDIRRHIIPFM DFSPRVAAHVKTMDARIFGETKMGLR >gi|290782006|gb|ADGP01000008.1| GENE 47 46531 - 47910 1685 459 aa, chain + ## HITS:1 COG:BS_citG KEGG:ns NR:ns ## COG: BS_citG COG0114 # Protein_GI_number: 16080357 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Bacillus subtilis # 1 458 1 459 462 549 58.0 1e-156 MDYRIEKDSMGEIKVPAQKLWGAQTQRSYENFKIGTEKIPLELVTVFAYLKKTAALVNAE AGVLDETRKAAIVQACEEIVAHRWDDQFPLSVWMTGSGTQFNMNMNEVIGHRAEQIMAAH GQPGHVHPNDHVNRSQSSNDIFPTGLHVLSVLQLKARLFPALAHMEEVLNAKAEAYAHIV KIGRTHLQDATPLTLGQEIGGWAAMIRRNRQMLTTMTDFLRSIAMGGTAVGTGINCPPGY DVRFAAVLSELTGEEFHTAANKFQALTSKDELTVVHGGLKALAADLLKIANDVRWLASGP RCGIGEIRIPANEPGSSIMPSKVNPTQCEAMTMVAVQVMGNDAAMGFAASQGNFELNVFM PLMAYTMMQSVRLLSDAMRSFTDHCLAGIEPNEERIAQLLQRSLILVTGLVPLIGYDRAC AIAKKAALEGITLRQAALASGVEAAAYDEVMDPKKLARM >gi|290782006|gb|ADGP01000008.1| GENE 48 48119 - 48883 980 254 aa, chain + ## HITS:1 COG:BS_bioW KEGG:ns NR:ns ## COG: BS_bioW COG1424 # Protein_GI_number: 16080076 # Func_class: H Coenzyme transport and metabolism # Function: Pimeloyl-CoA synthetase # Organism: Bacillus subtilis # 13 252 3 240 244 174 41.0 1e-43 MLYSIKMHARKGGKNGRGGRHISGAERIVKPENIEQEVIRVLRRARQHERGAADFIQIKV ACVEPSQIQYCPLLPVRQQDVKTVAEGRRQARLALLRAGVSAAAAAKGFSYLTALRDSMR GAMLVDAVSGERVDGKGERGVRCSTMDCADAAAYARALAHTPYTGLHAREAFVLAAKVAA APGTVAELCWSDDPQYVTGYVASPRYGYERIMVMKQAGDPVGGRVIFIRPTTDVEAYMAY LQYQPVLVTCHEPL >gi|290782006|gb|ADGP01000008.1| GENE 49 48870 - 50039 954 389 aa, chain + ## HITS:1 COG:BS_bioF KEGG:ns NR:ns ## COG: BS_bioF COG0156 # Protein_GI_number: 16080074 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Bacillus subtilis # 1 367 1 368 389 288 43.0 2e-77 MNLYEFVNSRLAQRQAQGRFRRIRDLHMISSTCGYDRQGRRYLLFNTNDYLGLSHHPLVQ AAARRAVTDGCGAGGSRLLAGAPFILRELEEELADFKGTEAALLFSTGYMANVGVLSALP QAGDVIFSDALNHASIIDGCRMSRARTVVYAHMDMDDLEKKLQHESGGRRYIVTDGVFSM DGHVCPLPALVRLKQTYGAVLLVDDAHGLGVLGKSGRGTAEHFACRDVDIHIGTLSKSLG ALGGYVAASEAICRYLQNESRPFIFSTALPPAVAAAALTALRLLRAQGASYVAQIRDHIA YMCRQVPTISQRQPPVPVLPILTGSSAAAMQYAAACAEAGLLVSAVRPPTVPEGTARLRI TVTAGHTPDELRRGADILNEQGEKATWKQ >gi|290782006|gb|ADGP01000008.1| GENE 50 50027 - 50566 592 179 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0125 NR:ns ## KEGG: Selsp_0125 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 20 174 2 156 165 116 51.0 5e-25 METVKHTALSANETAGKEPKKKSGTGRDICQIALLAALIGVSGMFKIPGIFPGTEFQLSA SIAVGICGVFGFKKYITAGIIASVISLLLGVQTLISVCIAMTFRLTVGVVWMALGSSRVF YALSGPLGTTAARAVITLILGKGFTAMWLAACPGMVFTALTSFLAAHLLRRCQRAVQRR >gi|290782006|gb|ADGP01000008.1| GENE 51 50781 - 51266 671 161 aa, chain + ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 1 148 1 148 150 178 52.0 4e-45 MHIVMVEPEIPGNTGNVARLCAANHMTLHLVKPLGFSLEDKYLKRAGLDYWPLVDVQVHE NVADVMAKYAGHAMYYLTTKSRQCYADISFTEDDLLFFGKETKGLPESMLKEHPERCFRI PMIEAARSLNLSNSVAIVAYEALRQLQFPGLTGGIGIDNLQ >gi|290782006|gb|ADGP01000008.1| GENE 52 51282 - 51629 576 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967917|ref|ZP_06559467.1| ## NR: gi|290967917|ref|ZP_06559467.1| hypothetical protein HMPREF0889_0050 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0050 [Megasphaera genomosp. type_1 str. 28L] # 1 115 1 115 115 188 100.0 1e-46 MEIYDKAQALAKAIGECREYEQLVKAGEELAKDKSTKDMVKEFLVLQAELAYGQSMGAAP AKKRTDRLNELSVLIKNNTQAQDYLQTYHTWQNMAGEILQIIQQAMAKGMSILDR >gi|290782006|gb|ADGP01000008.1| GENE 53 51619 - 52542 1025 307 aa, chain + ## HITS:1 COG:CAC0510 KEGG:ns NR:ns ## COG: CAC0510 COG0812 # Protein_GI_number: 15893801 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Clostridium acetobutylicum # 9 306 7 303 305 248 43.0 1e-65 MTDNRLSLLIETLQPHMKPEQMLANEPMSRHTTFAVGGPADLLLLPYTVKEMSLAIRAAR ALQLPITVLGGGSNVLVLDGGIRGAVIQLQALTQVLYRHDDRITASAGHMLADVCEFACA EGLGGAEFACGIPGTLGGAVFMNAGAYDGEMSHIVARVRTVDHRGGVHTYAAAACRFAYR RSRFQETQEYVVEAELLLHAASRTAIQARMEELMRRRRSKQPLEMASAGSTFKRPPGYFA GTLIDQTGLKGLTFGGAQVSTKHAGFVVNTGRATARDVLQVIHAVQERVEAAHGVRLEPE VRILGEK >gi|290782006|gb|ADGP01000008.1| GENE 54 52693 - 54498 2291 601 aa, chain + ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 1 600 4 605 605 771 66.0 0 MERTDIRNIAIIAHVDHGKTTLVDAMLKQSHIFRTNEKVAERVMDSGDIERERGITILSK NTSVMHDGVKINIVDTPGHADFGGEVERVLNMVDGVLLLVDAFEGPMPQTKYVLRKALEQ KLKPIVVINKIDKPGARVAEVEDEVLELFMELDATDEQLEFPVVYANGRDGIAKLSMDEE SKDLEPLFKTIVNHCPCPQGDADGPLQFMVTTLDYDEYVGKIAIGRVVRGKMVPNQNVVV TDGEGQRRGKIGRVYTYEGLQRKEQTEAAMGEIACIAGIGDLKIGETVTDPQNPEALPKI DIDEPTLSMIFYVNDSPFAGQEGDYVTSRHLRDRLFREVQTNVSLRVEETDSADAFKVSG RGELHIAVLIEEMRREGYELQIGKPSVITKQINGQKCEPLEALTIDVPQEFMGAVMEKLG TRKAEMVNMTDVSGYTRLEFIIPARGLIGFRSEFLTATKGNGIMYHVFHGYAPWKGEIPG RTRGSLVAFESGTTTGYGIFNLQDRGVMFIKPAQEIYLGQVVGESNRDVDIDVNPCKKKH LTNTRSSASDEALRLIPPQDMGLEKALEWINEDELVEVTPQSIRIRKAILDKHDRKRAMR K >gi|290782006|gb|ADGP01000008.1| GENE 55 54632 - 54898 134 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDWIIFEPFGVEAEKKERYNIPVIIIIPVMIRLFRSVETALPHRTPLLYRFCKPGHKKS AEGSMQHSALFLLAYINHNEKRAFFIEK >gi|290782006|gb|ADGP01000008.1| GENE 56 55329 - 56750 1841 473 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0557 NR:ns ## KEGG: Vpar_0557 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 3 439 2 382 401 178 32.0 4e-43 MKKSKVLAALVATMAVGATCAFAANPFADVPSDSWAYKSVITLANSGIIQGVDGTHFQGQ RNITRYEAAEITAKAMAHADRANAQQRAIINKLANEFAGELNTLGVRVTNLEQQVGTVKF SGDARVRYRHAGSATNETIKWAQDGDKLKGTTTTSKVADDAYKNDAAWDYNMHLNADAKV SDTMTAHFSVFTDDQQFSDDKAAGELHAFVNNANLEYTPNDNSSVQIGRIDGYTMGNAYG YQYGDVLEGVKANYHNDQFAVTAGYGKLKSGDHAGENVKTGFGEVEGFFGNGSAAGVYYN NFTVDPAHKYSTQNKDGFKADSLWGAYVNAKLADNLSAMANYESVNLTTAAKTDATKAGN KETPAVWVGQVTYGNLDQEKAGSWDTWVEYLHADAGSLVGGSSASWRKDLDNVKSWGIGV DYTVSKNVVLKAAQTFGSKAVKPQFDGKKEAGQEQHAQTKPSEYTTVSLNFSF >gi|290782006|gb|ADGP01000008.1| GENE 57 57077 - 57958 1402 293 aa, chain + ## HITS:1 COG:BH1370 KEGG:ns NR:ns ## COG: BH1370 COG0752 # Protein_GI_number: 15613933 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Bacillus halodurans # 1 292 1 292 297 452 72.0 1e-127 MNFQEMMFALKTFWSSQGCIMYEAYDVEKGAGTMNPATFLRTVGPEPWKVAYVEPSRRPA DGRYGDNPNRLYQHHQFQVICKPSPDTIQELYLQSLAALGIRAAEHDIRFVEDNWESPTL GAWGLGWEVWLDGMEITQFTYFQQVGGIDVNPVASEITYGMERLAMYIQGVENVYDLQWN ETFTYGDIFHQNEVEQSTYAFELSDADMLFELFDRYEKEAQRIAAKGLVIPAYDYVLKCS HTFNLLDARGAISVSERAAFIGRVRKMAGMCAKTYLAQREALGFPLLKKEAAK >gi|290782006|gb|ADGP01000008.1| GENE 58 57955 - 60009 2267 684 aa, chain + ## HITS:1 COG:BS_glyS KEGG:ns NR:ns ## COG: BS_glyS COG0751 # Protein_GI_number: 16079580 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Bacillus subtilis # 1 679 1 673 679 449 39.0 1e-126 MSKDILLEIGTEEVPAHAMPGILRQLREAAATALQEAHIPFDAVRTVGTPRRLALLVTAA AEMQDAVTTVHKGPSARIAYAADGTPTKAALGFARGLGLDVTALRVQDGYVFAEVTHTGE ATKTLLPSLLPALIQHLSFPNSMRWGRETFRFIRPIRWLVALFGEEVIPFTLAGVTTGRR SRGHRFLGDGDFDIPSAQAYEATARDHFLMVDPKERETYIQHELCRELAAAGAKQTVDPV LLEEVVYLVEYPTVLCGSFDEAYLQLPEAVIITPMKDHQRYFPMYSAATGRLMNRFLTVR NGDARYLDTVRHGNERVLRARLDDAKFFFTEDRKQSLWAHVESLRHIVFQNGLGTLYDKA LRLQKLTVYLNHSLQLGLEDAQLERACLLAKADLSTQMVMEFTELQGVMGKEYAKLDGES EAVAAALQEQYLPRYAGDDLPQTVMGSVLSVADKIDTLVGMFRLGKLPTGSQDPYALRRQ TIGVLHILLQRQWDADMATLLDAAAAGYEAADEAAGDVRKQLEAFIALRLKNIFQDRGHE ASLIEGAMAGHPLNAMQGQRRVEALETARRLKQEDLLQAYTRVGNMVREDTPTHVTEALF TAAAERDLWAVCRQMEAALPAVYAAYDFEAALRILRTGMDAIRTFLDTVRVLDENIAIRE NRLHLLARVYALIRPFGDIRKVKN >gi|290782006|gb|ADGP01000008.1| GENE 59 60304 - 61503 1306 399 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 13 397 6 386 386 353 43.0 3e-97 MDTNTLIQNFTKRPVWAQIDLDAAIANIRGIRRLVGPQVCVTSVVKANAYGHGAIELAKV FLGHGADQVAVACLGEAVELRQGGITGRILILGHTDGHRAEELTAYGVEPTVFRYEDALR FSRAAQAQHRTVNIHIAVDTGMGRIGYEPNANGIREIQAIAALPGLQLEGVFTHFAVSDS NTPADRAYTQAQYQCFTKFLTALAEVGIRPVYTHCCSSSGLLSQTAFHQNMVRPGILQYG YHPSGTVACTSFTPQPVMSLRCCITHVKWVHKGQYISYGRHFQATKETCIATIPVGYADG YPRLLSNRTEVLVHGRRVPQVGNICMDQCMIDVTDVPNVQIGDEAVLFGTQGEGSLPLEE LAAAIGTIDHEILCNINRRVPRVYVRGGQVVRRVEYLVE >gi|290782006|gb|ADGP01000008.1| GENE 60 61768 - 62946 1239 392 aa, chain + ## HITS:1 COG:BH3350 KEGG:ns NR:ns ## COG: BH3350 COG0436 # Protein_GI_number: 15615912 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus halodurans # 4 389 8 392 393 356 45.0 3e-98 MDWQQKVTPKVAAMKPSGIRKFFDLAAQLEGVLSLSIGEPDFTAPPEVLTAMQKSLTDGK TGYTANAGMSALRREIGAYMQRQHQLTYDPDREILVTAGVSEGLMLAAMAYLQAGDEVLI PEPAFVAYPAVAEMAGACPVPVPTRAAQGFKLQAADLEKAVTARTKMLLMGYPNNPTGAV LSREEMAPIAEFVRKHDVLVVTDEIYCRLMYEQVPFTSFAALAGMRERTIVCNGFSKAWA MTGMRLGFLCAPAAGLAPLAKLHQYAVMCVNTQAQYGGLAALQEGEKAAETMRREYDRRR CVLYDGLQAMGLAVTKPQGAFYMFPDIRITGMTDTEFCERLLTEEKVAVVPGSAFGAAGA GHVRISYAASYETIVEAIGRMARFVKKYKNAR >gi|290782006|gb|ADGP01000008.1| GENE 61 63495 - 63896 601 133 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2503 NR:ns ## KEGG: CLOST_2503 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 28 130 6 109 115 68 32.0 8e-11 METMETMEAAGKKEFTRIVYKEEAFLQRFFSYRGRLNRKQYFWRVLATGIAGVLFTQVFQ DGTLLTALGYALAMAAWVSSLMLGIRRFHDLNKTGWGMIAGVIPGINIALAVYLVMAKGA TEENKFGLAPAAY >gi|290782006|gb|ADGP01000008.1| GENE 62 63912 - 64334 531 140 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0207 NR:ns ## KEGG: Selsp_0207 # Name: not_defined # Def: protein of unknown function DUF805 # Organism: S.sputigena # Pathway: not_defined # 27 138 162 291 291 90 37.0 2e-17 MQSFCQAMLQQEPYEEQQAFRDTAKAGDWRRFLFSYHDRLNRKPYIFGCLAAGMVGTAAS AMLDAIWFPVNLIVAFPVLILCVVACACLTIRRFHDLNRSGWLYFLTFIPLLNIILGFYL VFVRGTCGMNRYGPDPLENR >gi|290782006|gb|ADGP01000008.1| GENE 63 64653 - 64805 89 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIEKISNENNLIRTKRRINMQQSNKWDKGIKKRINGNKIQIKKNLSGTDR >gi|290782006|gb|ADGP01000008.1| GENE 64 64845 - 65405 469 186 aa, chain - ## HITS:1 COG:BH0394 KEGG:ns NR:ns ## COG: BH0394 COG2169 # Protein_GI_number: 15612957 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Bacillus halodurans # 1 177 1 177 181 134 40.0 8e-32 MTPEEWQAIKKRDTAYDGKFLYGVTTTKVICRPSCATRHAVPSHIVIFYDLPSALQAGYR PCCCCRPECPEWKGAKKELAEKAKKYIHLHYTEKFSLRAISAALFVNCNYLVRIFHEITN DTLLSYHHRLRCQEAKRLLLQDEYSIAYISTAVGYCSPSHFSRIFKKYVHQTPSAYRMRQ QQSKRK >gi|290782006|gb|ADGP01000008.1| GENE 65 65677 - 65892 320 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967932|ref|ZP_06559482.1| ## NR: gi|290967932|ref|ZP_06559482.1| FeoA domain protein [Megasphaera genomosp. type_1 str. 28L] FeoA domain protein [Megasphaera genomosp. type_1 str. 28L] # 5 71 1 67 67 107 100.0 2e-22 MPLSMLQRGESGVVKSIHGKPKDIHHLADLGLVVGATVKAVNEVAGNLIIEVKGSRLAMN KVMANRIILEV >gi|290782006|gb|ADGP01000008.1| GENE 66 65910 - 66131 248 73 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 9 73 85 149 152 68 50.0 3e-12 MRTLRDAAVGETVTVAKVRGDGALRRRLLDMGITKGAKIFVRKSAPLGDPLELTVRGYEL SIRKSDSEMVEIL >gi|290782006|gb|ADGP01000008.1| GENE 67 66148 - 68331 2519 727 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 699 4 700 709 703 48.0 0 MTIRVALAGNPNTGKTTLFNALTGSVQHVGNWPGVTVEKKEARLRYNKDVIVEDLPGIYS LSPYTTEEIVARTYIINDRPDVILNIVDASNLERNLYLTTQLVEVGVPVLLALNMMDVVK RNGDTIDMKKLGDELGCEVFPISALKGEGIKAAALRAVELAKEKKPHVSHHTYTPELEGK LDEIGALIADKADKDGMRWYTTKVFERDEQIMKALDLDAATKSKIDTIVTDCETQEDDDS EGIITNARYEYIAKLIEQCLVKKNKNGLTVSDRVDQIVTNRILALPIFVCIIFLVYYLSI STIGTAGTDWINDHLFGDIIPGIVDPALTNIGLSAWLHSLIMDGIIAGVGAVLGFLPQML VLFICLAILEDCGYMARIAFILDRIFRKFGLSGKSFIPVLVSTGCGIPGIMSSRTIESDN DRRLTVLSATFMPCGAKLPIIALITGALFPHSTWVAPSAYFLGMVSIVVSGIILKKTKLF AGDPTPFVIELPAYHIPSPLNVVRTMIDRALAFVKKAGTVILLATVIVWFLSGFDWHLAM VDDISNSILASIGKVIGHIFVPLGFGDWKATVASITGLMAKENLVGTFGILYGFAGVDGD DSVAIWQTLHNTYTPLAGYSLMVFNLLCVPCMAAVGAMRREMMSAKYSWFAVIYQCVFAY AVCLMIYRFGLWVSTGAFGPATVAAIIVALIFIYLLFFKKPATPEKNDPLAVVEAIEQAA GAKKSAK >gi|290782006|gb|ADGP01000008.1| GENE 68 68359 - 68487 119 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MANIIVGIIVFAAIAAAARNVYKKKNSCSCGCGSDCGGGCHH >gi|290782006|gb|ADGP01000008.1| GENE 69 68608 - 69921 1658 437 aa, chain + ## HITS:1 COG:CAC2138 KEGG:ns NR:ns ## COG: CAC2138 COG1227 # Protein_GI_number: 15895407 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Clostridium acetobutylicum # 194 437 66 308 310 196 40.0 7e-50 MGTIAVRSLNEVILLSKQIFVTGHKSPDTDSICTSIAYAKLQELQGVNAIPVRAGEINKE SAFALQYFKVEPQPLVTDLYVKVGKAVRRDIPPLPVSASLKDAAQWFAAYHPEEAPVVDG ERFVGVVAKAVLADEFIKTVTGEELSRIKDLVYMPETVFSPAHNGHDVPKEGHYVVVDGD RYIGMICAGCVEKADKQQVMLVDHNERKQIIDGIEEAEIVSVVDHHRIGGTLMTEGPIFI LFRPVGCTATIVTALYEQAGIAVPKQIAGLLLSAIISDTVLFRSPTCTEEDKEAAAKLAD IAGVDIQTYGMEMLKAGANVSDLTPDQIVHNDMKEFSDGVHTFTVAQVQVMDTSDLLAQK NELLAALERLRASKDFSASFLMITGIIEEATNFIFAGPMEEVVAKAFSKDVVEQEVFLPH VMSRKKQIVPPLLDAMK >gi|290782006|gb|ADGP01000008.1| GENE 70 69991 - 72198 2270 735 aa, chain + ## HITS:1 COG:BH0648 KEGG:ns NR:ns ## COG: BH0648 COG0210 # Protein_GI_number: 15613211 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus halodurans # 1 734 16 746 747 697 51.0 0 MFLGLNERQAEAVRQTEGPLLITAGAGSGKTKVLTCRIAYLLEKGVAPYRILAITFTNKA AKEMRERVEKLVGETAKSMWLSTFHSFCAKLLRFEIDGHFGYTRNFTIYDSTDQLTVVKE CVKILNLDEKNFPPRTILGTISEAKNLLYTASEYSRQAADFYKQKVAEVFRLYEQKLKES NALDFDDLLSYAVRLLKEDAGIREKYQQRFQYILVDEYQDTNRAQYLLTKILAEKWRNIC VVGDADQSIYAWRGADIRNIIEFTRDYGDAATIKLEQNYRSTKTILQAANAVIENNEERP QKVLWTENEEGKKIIHYAAQTEHDEAEYVAGCIYNRHEIGGEPYGDMAILFRTNAQSRVL EEKLMRHAVPYTMVGGTKFYDRKEVKDVLAYLRLLQNQQDSVSLLRIINVPKRNIGKTTL EKIGAYAEDRQISFFMALTEAEEIDITARAKRSIADFTALMCDLAEKATQLNVFSLLEAV LHDTGYAALLEKEAAHEVQGESRKANVGELLSVAKDYLQTNEDGNLQDFLENVALVSDVD SFSENDSNVTLMTLHAAKGLEFPVVFLVGMDEGLFPNARTLMSTAAVEEERRLAYVGITR AERQLYVTNAVTRAMYGRITSYLPSRFLTEIPPHLMTVHKPAAGLSRTGTGNRENFSVAG TQRVSILSKPITTHLPKKNVVSTDFHVGDTVQHRLWGKGEVVAVIGEGEGMQLKIQFPSQ GLRQVVVKYAPLEKV >gi|290782006|gb|ADGP01000008.1| GENE 71 72218 - 74224 1968 668 aa, chain + ## HITS:1 COG:BH0649 KEGG:ns NR:ns ## COG: BH0649 COG0272 # Protein_GI_number: 15613212 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Bacillus halodurans # 3 659 2 661 669 635 50.0 0 MTKREEQEKVRLAEIKKQLAELSYQYYTLDAPTVSDYEYDMLYRELETLEKKYPQWVTPD SPTQRIGSKISGTFAKYTHDRPMLSLGDVFSDEEVREFDARVRQELPGERVAYVVELKID GLAVNLIYEKGRFVRGVTRGDGHVGEDITHNVRTIRTVPLHISDLSDHVEIRGEVYMPIP AFRALNEQRSADELEPFANPRNAAAGSLRQQDPQVAAERKLSFFAYALGGTSDWRPESQE ALLQTLRNLHFPVNREYRTFTDIQDVIAYIHTWDTRRDTLSYATDGMVIKVNSFAQQQML GNTVKIPRWAIAYKFPPEQARTKVLQIRVGVGRTGVLTPTAELQPVRLAGTTVKSATLHN EEYIRSKDIRIGDTVLIQKAGEIIPEVVRPVMEARTGREVVFVMPTQCPSCGGQVQREAG EAAVRCVNPACPAMVAEQIAHFVSRPAMNIEGLGTAIVKQLIDHGLIHDVADLFLLHKEE ILPLEGFGEKSADNLLQSIAAAKEAGLGRLLFALGIRFVGAKAGRILAETFGSMQALAAA DIATLMAVETIGPRIAESVAAYFADSQKVRVIQKLAAAGVGMTEKKRQLINTSFDGEIVV LTGKLQHFSRKEAEAAISARGGSCTATVTKKTTLVVCGADPGSKYDKAKALGTPTIGEEE FCDRLNRE >gi|290782006|gb|ADGP01000008.1| GENE 72 74295 - 74585 415 96 aa, chain + ## HITS:1 COG:BH0665 KEGG:ns NR:ns ## COG: BH0665 COG0721 # Protein_GI_number: 15613228 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Bacillus halodurans # 2 95 3 96 96 72 42.0 2e-13 MKITGEEIQKIALLSRLHIEENQVDAVEKQLSDILSYMDLLKEVDITDVEPTAHAVTMRN VMREDVPHESLPHEAALANAPEPENGYFKVPKVLQD >gi|290782006|gb|ADGP01000008.1| GENE 73 74606 - 76063 1845 485 aa, chain + ## HITS:1 COG:all1053 KEGG:ns NR:ns ## COG: all1053 COG0154 # Protein_GI_number: 17228548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Nostoc sp. PCC 7120 # 2 468 3 474 486 528 60.0 1e-150 MTIHALHEKLVQRELTAVALTEAYLKHKDTVEPQIQAFLSDTREEALQTAAAVDAKIKAG KPVSELAGIPAAIKDNICIRGQQATCASRMLENFKAPYHATVIEKLAAQDYISLGKTNMD EFAMGSSTENSAFQVTHNPRHTDYVPGGSSGGSAAAVGAGECVWALGSDTGGSIRQPAAY CGVVGMKPTYGLVSRYGLIAYASSLDQIGPLTQDVTDCAIVLNAIAGYDEKDSTSIKREH NDYKTALVRDVKGMKIGIPDEFFGDGLSDGCRQALTEAIETYKSLGAEIVHVKMPHMKYG LAAYYIIAPAEASSNLARYDGVGFGLRVPGKNIVDMYEKTRSAGFGPEVRRRILLGTYVL SAGYYDAYYLRAMKVRTLVKRDYEEALRQCDVLLTPTAPGTAFKIGEHTADPLAMYLGDV CTVTLNLAGLPGISLPCGHQDGLPVGMQLIGKALAEETLLRVAYTFEQERPDLQQQSPVG EVTSA >gi|290782006|gb|ADGP01000008.1| GENE 74 76060 - 77502 1668 480 aa, chain + ## HITS:1 COG:lin1866 KEGG:ns NR:ns ## COG: lin1866 COG0064 # Protein_GI_number: 16800932 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Listeria innocua # 1 474 1 469 476 559 57.0 1e-159 MKYESVIGLEVHAELKTKTKIFCGCSTSFGAAPNTHVCPVCLGLPGVLPVLNKEVLHFAV KAGLALHCDILPFSKFDRKNYYYPDLPKNFQTSQFDLPICLHGYVDIEVGGKQRRIHLTR IHMEEDAGKLVHSGATIDTSDSSCVDYNRTGVPLIEIVSEPDLRSGEEARAYLEKLRSIL QYLGVSDCRMEEGSMRCDANISIRPVGSDTLGTKTEIKNINSFSGVQKGIEYEAVRQAQI LEDGGTIQQATRGWEEAKGITVLQRIKEGSSDYRYFPEPDLIPIEVSPAYIEAVRKELPE LPDVRRRRFQTEMGLSAYDAALLTGEKATADYFEETVAAGADAKVASNWILGDIAKKLNE EGITMVAIPVSPADLAGLLQLIDKGTISGKIAKKVLPEMWNSHKTAEAVVKEQGLVQITD TGELETIVRQIVAANPQSVADYQAGKKKAIGFLVGQIMKETKGRANPGVVNQLLTKILQA >gi|290782006|gb|ADGP01000008.1| GENE 75 77705 - 79162 1881 485 aa, chain + ## HITS:1 COG:SA0645 KEGG:ns NR:ns ## COG: SA0645 COG0471 # Protein_GI_number: 15926367 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 8 485 25 517 517 293 39.0 5e-79 MLSKKKIFIIVAALALMVGIFFLPDVPGLTGAGKAALSVLVFAVIMWVTQAVSYPVSAVA IIAFLTLFLGFSPAQGVSGPLLGTGRAIPLALSGFINGGWVLVAAGLFMAAGIIHCGLER RIAYQVLRVFGTKVRNIFAGIIALMALLCFVIPSMTARSATITPIAVGLVEALGLDLKSK FGSMLLVTVAITSSVSGMLLLTSGAPNPVALSFIGSQLNHEISWLDWFIYAAPYAVSLLI IFYFLVTRLNTFEFDEAPGGREFIEKKLVELGPMTKKEKKIAIIFGVTILFWMTQGIHHI DANTVSILSVLAMLFPGVGIGSWKDLCKRVDAGTILLFGAGISLGNVLLHTEAALWLAEV SLGNLHLEHLPPLLMMVPIMAALLIIRFAFASTTSSAAALVPTVIGFLLSLHNGALPMWG MAFIATMTVYFSFILPVHSPQAMIPYATQAFEVKDMIKMGIPFTIISLVILLVFVFTYWH WLGLI >gi|290782006|gb|ADGP01000008.1| GENE 76 79181 - 79753 916 190 aa, chain + ## HITS:1 COG:MA2536 KEGG:ns NR:ns ## COG: MA2536 COG0663 # Protein_GI_number: 20091364 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Methanosarcina acetivorans str.C2A # 2 188 47 245 247 140 43.0 1e-33 MLQKAPKTYWSTCEQAPSVAATAYIADTATVTGHVEISEGVMVCPGASVRGDEGMPIFIG PHSNIQDGAVLHGLMGQRQEVNGRSYSIYIGDRVSCGHCCVIHGPSVVAHDTFVGFNAAV VGSVVADHVYIGHGAQVIGVHIPAGRYVAHGTTVCTQAAADALPEVPEDIRTFNAEVVDK NSELARNYGK >gi|290782006|gb|ADGP01000008.1| GENE 77 79769 - 81268 1569 499 aa, chain + ## HITS:1 COG:BMEI0928 KEGG:ns NR:ns ## COG: BMEI0928 COG0427 # Protein_GI_number: 17987211 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Brucella melitensis # 6 498 5 495 496 532 53.0 1e-151 MNITDRIENRELQKLVRTPEEAAALIKPGMTIGTSGFTSAGYPKAVPLALAERIKKEKFK INLWTGASVGPELDGALSAVNGIAQRLPYQTNSTLRQQINAGDVQYEDLHLSHMSQMVRS GFFQKLDMAIVEVCAVTEEGYLIPTTSLGNTTAFVDCADRIIVEVNTTQPKALKGFHDVY DVQPVPHRDVIPIVHPDDRVGVPYIVCDPKKIVAIVPCDIPDKPAKLASPDAEFEAMSAH LIRFLHEEVAAGRLPKHLLPLQSGVGSVANAVIQGLCRSDFEHLTVYTEVIQEGIFDLFD AGKLDFASGTSMTLSEKGLQRFYDRIDEYRKKIIFRPLEISNSPGVIRRLGVIAMNTALE FDIYGNVNSTHVLGTKIMNGIGGSGDFARNAYLTFFFTKSIAKNGDISSIVPMCSHIDHT EHDVDVFVTEQGLADVRGLCPKERALKIIHQCAHPDYRPMLSDYFQRAMGATKHANTPHI LSEALSWHQRFAETKTMRV >gi|290782006|gb|ADGP01000008.1| GENE 78 81689 - 82366 719 225 aa, chain + ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 2 211 3 208 229 82 23.0 9e-16 MEKFLSIFERTALFQQVPKTDILLLLHDMQARLQRYTKGNFIFFTGDHIRHVGIVLSGAA HIVQEDYWGNRNIVAHLTPSQMFGEAFACQPEMATTVSVVSTDVTEVLFIDIFRIWRCRS RAAVSQERVMMNLLAILARKNMFLTRKIHYLSQRSMRKKLMFYLSEEATRQGASHFSLPF NRQELADFLAVDRSALSSELSKMKKEGLIDYYKRDFVLKSSLPAE >gi|290782006|gb|ADGP01000008.1| GENE 79 82805 - 87688 4495 1627 aa, chain + ## HITS:1 COG:STM2199 KEGG:ns NR:ns ## COG: STM2199 COG4771 # Protein_GI_number: 16765529 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 26 208 24 203 663 82 32.0 6e-15 MKQYTYASLSLLVTAYILTLGSSVQAAYTDAGRTQDVVVKTDAATAAARSESLETTIIGK RDIENKAAKSVEEVIFSEPGMVRTVDAMGRVTLSMRGAEPRHTLLLVDGQPVLGNVDKYN GAGDELQRLGTDNVERIEVIQGAASAKYGADAMGGVVNIITKKAAKKAAFTVRAENRKAA ASDGSLYGNYFLRADSGSTGKGRLALYAGRRTIAPIYSEKVFRGAINYAGDFRTSLRYYG DIKNTGLLVSYAPAKDKVLHMAADTVREDMKRFVKHRDDSPEPVVLYTRNINRNTYAVQY EDRSRGKTQWQIEMQYAKLHEADTAIGSKAAFSPFEGKNTLVYLDTLQHTQGTVKVAAQT QINASHLLSWGGGYTREEGEGARLSDAPVTHAVTIDPWEYDKNLYTEKGVGKPASNIHDW PFYKDKSGHMGVDLVYDQYGYRQGTRSLAPAYTYDDYTKEEEDENEDPTVQAQRDKRKAA FAEELRRENGKRNKEILEKDEDGEWDWDDDKMVRRYYAFHPENLEDGAFPLTWHGKTFME EHNKRDNQLTIGKAALTKHYIFLSDLRQIGTGTTVMSSVRRDQSSLFGSHLSFNIGLTRA LDTDGHTRIKANVGTAYAEPGMGELYYNWEMYGGTPYDLGVGKLGFYWLGNPYLKPETSL NFDVAWEKETPHTEARINVFHHRIKNYMSVYFTGQLLHFRKQDVHTWLMPPDMLYSFKNL GQAHITGVELSLAHRFLHHWRAKLGYTYVQAINESDPDMPKRLLNKPMHKVDVSLGYEHN GWKATLWGDYYVHMLDSNTVSHDGNYVELTDEFHRSPEGYRRERLVEEATVPDPRHAGKR GYQELEYTFSSKKLQTYKDKTFGIWNLLIQKRLNPAAAVYVGIDNLFDHRDDAQAMSART YKVGARFSLDGGEVRTKTARKTNGMSGRPAASAGSWFIGQPALPQRAGVQVHGAYAVRWQ AFTGKDKPEGVRVTTQATVGSAYKNYAEKGGHGFAQRLSVEVTAKLGRRSYVTLAGSADG MPGSDTAYDTSDSRGLNAQHVDTAALTRRDNTWDIAVGRLQEPLGLSGYWFRQTFDGVRI VRTGKGTQVRVGYGDFSQQTGIKDSAYSRALWGTFYRPPTKAEWLGIQPLNASASERYQN GAVYTKDYGSLYAALVKAGNFAEEYKIFKQYKAVMDAYGDEQYQKKTKSALATLGQYEVN TYMWEKITLIDARGKKQTFLAAVIPLATGNTASIEDIQTMRKWGQTAFENTENKIKQTPF NGKRYISQSGIIKPGTYTIQTEFYGYGMYKGKDVLQDLGITSIGQRGGIAFDKVRKEEFQ TISRQEALEKARTSLYDRTTAWEKVQAVQHEQPVYGWEKATISPVMKSVLLRLAGSEGWK PENDSSLPLQCLGKQGYRLRQDGMILQQDAVPSLQRAAFVQLKRQVNRHWGWQVWGLHSV GDATYTTSSVQAGRVVPRTFRTRAAVIGLGIQVKVLPQVTVSAEAGQNYTALARYLNGST VYDHPEHSNVFTVKGHTDGNAPYFMVYRLDCGAYDRRRPGSWHMFLDYKYFQHGSFFGGN GTESVPDRYLDGVSCFTVGSDYAVKKNLSLAAYYTFGVKGIHERDSLYGPERFTLGDYLR VQGTYHF >gi|290782006|gb|ADGP01000008.1| GENE 80 87860 - 90001 2610 713 aa, chain + ## HITS:1 COG:BH3595 KEGG:ns NR:ns ## COG: BH3595 COG0556 # Protein_GI_number: 15616157 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus halodurans # 14 669 2 659 660 839 65.0 0 MDIHTHLSKDYDDSQPFHVVAPYAPTGDQPQAVASLTAGIRSGQWAQVLLGATGTGKTYT MAKVIEAVQKPTLVIAHNKTLAAQLCSEFKQFFPNNEVAYFVSYYDYYQPEAYIAATDTY IEKDSAINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSELVVSLRLGQEKE QTEILRKLVAVQYTRSQMTLQRGTFRVLGDTIEVFPVSFDNTVVRIEMFGDEIERLTEVD ALTGEVVAERKHVAIYPASHYVTTKEKMTRAVATIEAELAARLQELKRDGKLLEAQRLEQ RTRYDIEMMMEMGYCSGIENYSRHLAGRKAGETPYTLLDYFPEDYLIMVDESHVTLPQLR AMYAGDRSRKENLIEYGFRLPSALDNRPLRFEEFVERINQIIYVSATPGPYEMEAATNVA HQIIRPTGLTDPTIEVRPIAGQLDDLLGEIRLRTERKERVLVTTLTKKMAEDLTEYMREM GVRIRYLHSDIATFARAEIIRDLRAGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFL RSYTAFIQTMGRAARNARGKVIMYADRMTDSMRRAIAETARRRAVQEAYNKEHHIVPQTV KKEVVDLIELTKVAEAPRPYGAQQEAPLTPEALQKVIRTVTRQMNEAVKQLKFEQAAVLR DRLGSLRQQLADLSQDDTLPPALRGRDMPKARYKRKVKRPDRKAVFSMTRQKE >gi|290782006|gb|ADGP01000008.1| GENE 81 90007 - 92871 3129 954 aa, chain + ## HITS:1 COG:BH3594 KEGG:ns NR:ns ## COG: BH3594 COG0178 # Protein_GI_number: 15616156 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 6 945 6 945 957 1209 62.0 0 MADTYITIKGARQHNLKNIDVQIPRRTLTVFTGLSGSGKSSLAFDTIYAEGQRRYVESLS AYARQFLGQMDKPDVDYIEGLSPAISIDQKTTGRNPRSTVGTVTEIYDYLRLLYARAGEA FCPQCGKPIRQQTIQEMTDAVMTLPTGTKLMVMAPVAEGRKGTHRKLLTRLIKDGYVRVR IDGEVYRLSEDITPEKNKKHTIEVIVDRLVMKDSIAARLTDSLETAAKLSGGILRVLNVE TGEVLTYSQHFSCPECHLSLPEIEPRLFSFNSPFGACPACSGLGSTMEVEERLVIPDRHK AFSQGAVAALSNNPDSWFMRQLAAFLEQHGASLDASFADLSPAVQQKLLWGTEELCVFSY KNLHGRSKTFSVPFEGICPMVRRRYGEASTDMMREQFARFMQVTPCRTCHGARLRPEALA IRLGGLDISQVTQLSVQALLSFFKKLSLTARQALIGKQVLKEIKARLQFLQNVGLSYLTL SRSAGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDKLLQALKNLRDLGNT LIVVEHDEDTIRAADWVVDMGPAAGSGGGRIVAQGTVSVIEQCADSVTGQYITGTKYIPL PPVRRRGNGKSLTILGAAEHNLKNLDVTFPLGVLTVVTGVSGSGKSTLVNDILYKAMAEA LYGTIHRPGAFTALKGVENIDKIINIDQSPIGRTPRSNPATYTGVLDPIRQLFSQTAEAK IRGYAAGRFSFNVKGGRCEACRGDGIIRIEMNFLPDVYVPCEVCHGERYNRETLEVKYKG KTISQVLQMTVAEAREFFAAIPRISRKLQTLQEVGLGYIQLGQAATTLSGGEAQRIKLAA ELSKRSTGRTLYILDEPTTGLHTADIHKLLEMLQRLVQGGDTVVVIEHNLDVIKTADYVI DLGPEGGDGGGTIVAAGTPEEICRIRTSYTGNYLKPVLARTEKWMRRGEKQDVE >gi|290782006|gb|ADGP01000008.1| GENE 82 92861 - 94699 2014 612 aa, chain + ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 9 596 7 618 623 454 36.0 1e-127 MLSEAVLDKIRQLPLQPGVYLWKNEQGRIIYVGKAVALRNRVRSYLRQDARRSPKVAAMM RQAADVETMVVANEMEALLLENTLIKKHHPRYNIMLRDDKTYPYIKVTVQEPYARVFMTR RMIRDGARYFGPFADAQAVHRIITLLQRTFQLRSCRTMRQDRPCLQYHLQHCPAPCAQKI TQADYAQAVRQALAILEGRDKHLVVTLTAKMNRAAARMEFEKAAAYRDQIQAVTVIQGQQ HVTQVGGGDMDVVALVSEAGQTCVQVYIVRQGRLLGRETFSLENGAEERESRLTEVVLDQ YYAAAGEIPAEIVVAALAHPRAYAERWRKRCGRSVRITIPLRGMKKKLLTMAEENGRLLL AQRRLQWQHDRDKTMGAVEALAQIFDLPRLPLRMECFDISHTQGLETVASMVVFENGRPA KREYRRFKLQTVQGKPDDFKSMAEIMRRRYGEKDWPVPDLIVIDGGLGQLHAALPVIRQA GCEAPVISLAKRLEEVFTEHTTHPVILSHHTPELQLLQAIRDESHRFAITYHRTLRGKRA LVSILDHIEGIGPKRRRALWQAFKNLEEMKQADVETLAAVPGMNRQVAENVYQFFRLGTD EKRKLTGVAKSV >gi|290782006|gb|ADGP01000008.1| GENE 83 94768 - 95403 790 211 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0325 NR:ns ## KEGG: Acfer_0325 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 30 205 50 242 247 108 34.0 2e-22 MKKQKILAAVCAIFSAGAVLATAAAPAQIMPQEAIFVRRGGSEFTYIYPAIEAESALAGL RMNQYFLNEKDREALHFDGQTDNSRIKRAYQVMLNDGDYVSIIDTGMSYTQGDAHPLSWK HGVTFNVATGKQVQWQYMLNDETAPQLTLAKINAMLRQSGYALASDFAGLQTLPQNFYVD GQRNIHFLFNPYEIAPYAAGIIDLNTHVRAQ >gi|290782006|gb|ADGP01000008.1| GENE 84 95756 - 95917 278 53 aa, chain + ## HITS:1 COG:AF1349 KEGG:ns NR:ns ## COG: AF1349 COG1773 # Protein_GI_number: 11498945 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Archaeoglobus fulgidus # 1 53 20 72 73 70 64.0 8e-13 MDKYECTVCGYIFDEAEGDADCGIAAGTKFADLADDWICPMCGADKGSFKKVD >gi|290782006|gb|ADGP01000008.1| GENE 85 96185 - 97378 1533 397 aa, chain + ## HITS:1 COG:TVN0402 KEGG:ns NR:ns ## COG: TVN0402 COG1167 # Protein_GI_number: 13541233 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Thermoplasma volcanium # 2 394 4 399 402 370 45.0 1e-102 MKFSTLASGLKASEIREILKLTTQPEIISFAGGLPAPEFFPIEELKKVDAEILEKEGMQA VQYGTTEGYLPLREKIAEHMKTAFGVDCSAEELMITSGSQQGLSLLSQIFLDPDDVVLVE SPTYLGAINAFTLQHPRFIEVPTDEQGIIPEALEKILQEHGKAVRLMYVIPEFQNPTGIT WTEERRKAFMKVVGAYDFPIIEDDPYGELRYDGEKMKALKSLDTKGQLIFLGSFSKIFMP GLRLAWMAASPEILDKAVKLKQAVDLQSSSFAQRQAYYYMKRYDINEHVRNLVQVYGKRR TLMCETMKQYFPQGITFTYPEGGLFTWVTLPEGMDATALMPKVLAEKVAYVPGGPFYPHG GHRNHFRLNYSNMPEDRIEEGVKRLAAVLTEEMKNIT >gi|290782006|gb|ADGP01000008.1| GENE 86 97670 - 102061 5091 1463 aa, chain + ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 289 562 816 1094 1190 87 34.0 3e-16 MNRIFKVIWSKTKHAYCVVSEIAHTHSRASTRRTKAVSLAAVFLVSVAGSTYAALTPTEK AVYDAVMQQLETEKKIVHYFSVKSTDQDAGSNWNNDGATKEDAIAIGNRAQALDYYSTAL GYGAIAKGNSSTALGEEANAQGHDSVALGREAQALIGGSVALGSKTVAGREAGKVGYVAS AGGTTFDAVLTALGKKTDYDKWRETISKLKEEERREYVRLKLMYAEADKSGKSAAKTALD EWERNHQDFVNALKEKSKLEVTWRATKAAVSVGVDGEVVDKQGNKIIETRQITNVAAGSA DTDAVNVAQLKALNTKVDKGVVHYFSVKSTDKGAGSNWDNDGATGEDAVAIGIGTQAKEY ASTALGTEAQAKESASTALGYQAIAQGRVSTALGDEAKAQGECSTALGSRAQATVEGSVA LGEGTVAGREAGKVGYLASAAGTTFDDVLTALGKKTEYYKWKVTIDASIDEYNWLAQEYF MAHGDSDKATAKDKLDKWKGNHPEFVNALEEKSKLEATWKATKAAVSVGRDSLDEEGNRI SRQITNVAAGTQDTDAVNVAQLKVLNTKVDKVAEGSVHYLSVNSSEQGAGSNYKNDGAKG VHAVAIGAYATADSAGGVALGRDSTEKRAGGLFGYNPKNGAAFVDGTAVAEYLGKTTEYD ALQTEMTAKKKAVEEAKKALKENAADITKKENLNKAYQALEAVQQKENLLLGAYRSAGGY GAFSVGNEEKGITRQITGVAAGTKDTDAVNVAQLKVLNTKVDKVAANSTAYTVETKENDD NTTTVTIKSNKAGDKDTAVTVATKDIHITSGTYDKTTKKLTFTTNTNTTFNVDMNDVINA AAEGSVHYLSVNSSEQGAGSNYKNDGAKAKDSIVLGVRSSSEGINGVVVGNDNKLTGTKN DQNNSVVIGTGLNVDGVHNIVVGTNYENYDQKETKVKGEQNTVIGNGNLVGYTAEKDPND ATKWKYTEVSTSGSDRNVVVGSCNTANGSSVAVGTSLEVEDLGRAFGSGNKIIGSNNGGG QWGLALGSNNTVKGEMAVSVGTGTNASGDYTVSIGSEAKTNASQSIAMGYKAETGQGWSA AIGSGAKTQGTASTAVGGLKVSATVDYGAAFGSFSVAQREKGVSGYLANGQAGLAWKSNL GAFSVGDDVKGYSRQITGVAAGSEDTDAVNVAQLKAIEKKIGTGGTNGKDGKSAYDIWLE TQTDKTKTKQDFLDSLKGKDGKDGTGADIDIKGDTGSGVSVTSNTESGKKTYTIGLSTKI KAGEVTIDGTKDKENIAVGYVKINGEKGKGTITGLSNKTWDPNHIESGRAATEDQLQAVT QGMTEISGGIAHVGAHAAALAALHPLDFNADEKLDLAAGVGNYNGANAVAVGAYYRPNER TMFSIGGSFGSGKNMVNGGVSLKVGSGSVRSMAKAVPARQLAAQQREIREQRAQIQVLQQ RDKDKEAQIQALWQELRQLKNRK >gi|290782006|gb|ADGP01000008.1| GENE 87 102423 - 102714 175 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967956|ref|ZP_06559506.1| ## NR: gi|290967956|ref|ZP_06559506.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 97 1 97 98 167 100.0 2e-40 MNHIYNVIWSTVKHCYVVVSEIAKRDGKAGSCRKKSGMQAAVLAVCALCSIGSILPVAAQ ENDTSAPAVQTGQTPQQKTNQDVKSIGLMSTAVINAK Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:25:29 2011 Seq name: gi|290781863|gb|ADGP01000009.1| Megasphaera genomosp. type_1 str. 28L contig00035, whole genome shotgun sequence Length of sequence - 159128 bp Number of predicted genes - 142, with homology - 137 Number of transcription units - 78, operones - 26 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 121 - 157 0.6 1 1 Tu 1 . - CDS 175 - 609 559 ## Selsp_1718 flavodoxin/nitric oxide synthase - Prom 648 - 707 8.1 + Prom 717 - 776 4.7 2 2 Tu 1 . + CDS 807 - 1721 522 ## COG1893 Ketopantoate reductase - Term 1546 - 1580 2.4 3 3 Op 1 6/0.000 - CDS 1731 - 2144 469 ## COG2030 Acyl dehydratase - Prom 2164 - 2223 3.7 - Term 2207 - 2248 9.2 4 3 Op 2 . - CDS 2287 - 3432 1560 ## COG1960 Acyl-CoA dehydrogenases - Prom 3459 - 3518 6.3 5 4 Op 1 2/0.000 - CDS 3571 - 4692 1273 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 6 4 Op 2 4/0.000 - CDS 4692 - 5978 1265 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 7 4 Op 3 . - CDS 6000 - 6776 998 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 8 4 Op 4 . - CDS 6816 - 7733 1134 ## NT01CX_2371 4-hydroxyphenylpyruvate dioxygenase C terminal domain-containing protein (EC:4.4.1.5) 9 4 Op 5 . - CDS 7774 - 9327 1769 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase - Prom 9577 - 9636 7.0 + Prom 9920 - 9979 6.9 10 5 Tu 1 . + CDS 10022 - 10765 726 ## COG0710 3-dehydroquinate dehydratase + Term 10771 - 10823 3.1 - Term 10754 - 10800 -0.8 11 6 Tu 1 . - CDS 10843 - 11298 513 ## COG1683 Uncharacterized conserved protein - Prom 11358 - 11417 6.1 + Prom 11317 - 11376 6.2 12 7 Tu 1 . + CDS 11425 - 13086 1704 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 13089 - 13152 5.0 - Term 13093 - 13123 2.3 13 8 Tu 1 . - CDS 13138 - 13734 494 ## gi|290967970|ref|ZP_06559519.1| hypothetical protein HMPREF0889_0514 - Prom 13757 - 13816 7.7 + Prom 13776 - 13835 5.0 14 9 Op 1 . + CDS 13866 - 14276 658 ## COG5496 Predicted thioesterase 15 9 Op 2 . + CDS 14288 - 14683 449 ## COG5496 Predicted thioesterase + Term 14703 - 14749 16.2 - Term 14485 - 14539 -1.0 16 10 Op 1 . - CDS 14644 - 14823 106 ## 17 10 Op 2 . - CDS 14865 - 15290 561 ## COG0511 Biotin carboxyl carrier protein 18 10 Op 3 . - CDS 15322 - 15714 414 ## gi|290967974|ref|ZP_06559523.1| hypothetical protein HMPREF0889_0518 19 10 Op 4 . - CDS 15733 - 17262 1999 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - Prom 17291 - 17350 7.9 + Prom 17241 - 17300 4.1 20 11 Tu 1 . + CDS 17369 - 17653 104 ## - TRNA 17477 - 17565 73.5 # Ser TGA 0 0 21 12 Op 1 . - CDS 17691 - 18437 717 ## COG0863 DNA modification methylase 22 12 Op 2 . - CDS 18437 - 19318 701 ## Selsp_0626 Type II site-specific deoxyribonuclease (EC:3.1.21.4) 23 12 Op 3 1/0.050 - CDS 19400 - 20470 779 ## COG0338 Site-specific DNA methylase - Prom 20523 - 20582 4.0 24 13 Tu 1 . - CDS 20605 - 21741 1419 ## COG0502 Biotin synthase and related enzymes - Prom 21868 - 21927 4.5 - Term 21856 - 21894 3.0 25 14 Tu 1 . - CDS 21945 - 22775 1138 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 22811 - 22870 4.8 26 15 Tu 1 . - CDS 22913 - 23878 1290 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins - Prom 23913 - 23972 6.3 - Term 23956 - 23999 -0.2 27 16 Op 1 . - CDS 24020 - 25294 1421 ## COG0172 Seryl-tRNA synthetase 28 16 Op 2 . - CDS 25365 - 26003 629 ## COG0406 Fructose-2,6-bisphosphatase 29 16 Op 3 6/0.000 - CDS 26013 - 27605 2013 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 30 16 Op 4 . - CDS 27623 - 28135 606 ## COG1932 Phosphoserine aminotransferase 31 16 Op 5 . - CDS 28026 - 28697 453 ## COG1932 Phosphoserine aminotransferase - Prom 28727 - 28786 3.1 - Term 28709 - 28757 14.7 32 17 Op 1 . - CDS 28795 - 28941 82 ## gi|290967987|ref|ZP_06559536.1| hypothetical protein HMPREF0889_0533 33 17 Op 2 . - CDS 29017 - 29961 1029 ## Vpar_0353 hypothetical protein 34 17 Op 3 9/0.000 - CDS 29982 - 30569 847 ## COG0461 Orotate phosphoribosyltransferase 35 17 Op 4 . - CDS 30576 - 31289 1025 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 31337 - 31396 5.4 - Term 31391 - 31430 5.2 36 18 Tu 1 . - CDS 31449 - 31613 247 ## gi|290967991|ref|ZP_06559540.1| ferredoxin - Prom 31664 - 31723 6.5 - Term 31925 - 31979 8.1 37 19 Op 1 . - CDS 32041 - 33309 1000 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 38 19 Op 2 . - CDS 33326 - 34567 1370 ## COG0772 Bacterial cell division membrane protein 39 19 Op 3 . - CDS 34551 - 35225 761 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 35258 - 35317 3.2 - Term 35241 - 35276 5.1 40 20 Tu 1 . - CDS 35328 - 35540 274 ## COG4481 Uncharacterized protein conserved in bacteria - Prom 35581 - 35640 6.2 + Prom 35531 - 35590 7.3 41 21 Op 1 . + CDS 35812 - 36099 154 ## gi|290967996|ref|ZP_06559545.1| hypothetical protein HMPREF0889_0542 42 21 Op 2 . + CDS 36104 - 36676 356 ## gi|290967997|ref|ZP_06559546.1| hypothetical protein HMPREF0889_0543 43 21 Op 3 . + CDS 36692 - 37237 592 ## gi|290967998|ref|ZP_06559547.1| hypothetical protein HMPREF0889_0544 + Term 37244 - 37280 4.2 + Prom 37379 - 37438 9.5 44 22 Tu 1 . + CDS 37522 - 38058 748 ## COG1592 Rubrerythrin + Term 38087 - 38125 6.1 + Prom 38076 - 38135 4.4 45 23 Op 1 1/0.050 + CDS 38340 - 39260 768 ## COG5495 Uncharacterized conserved protein 46 23 Op 2 . + CDS 39184 - 40038 798 ## COG0413 Ketopantoate hydroxymethyltransferase 47 23 Op 3 . + CDS 40128 - 40286 107 ## gi|290968002|ref|ZP_06559551.1| hypothetical protein HMPREF0889_0548 48 23 Op 4 . + CDS 40283 - 41461 1214 ## Despr_0540 type 11 methyltransferase + Term 41491 - 41534 12.3 - Term 41474 - 41526 2.7 49 24 Tu 1 . - CDS 41565 - 42530 1010 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 42560 - 42619 3.7 50 25 Op 1 1/0.050 - CDS 42634 - 43137 394 ## COG0703 Shikimate kinase 51 25 Op 2 . - CDS 43124 - 43945 695 ## COG0169 Shikimate 5-dehydrogenase 52 25 Op 3 . - CDS 43908 - 44765 648 ## COG0077 Prephenate dehydratase 53 25 Op 4 5/0.000 - CDS 44768 - 45862 932 ## COG0082 Chorismate synthase 54 25 Op 5 3/0.000 - CDS 45864 - 47144 999 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 55 25 Op 6 2/0.000 - CDS 47152 - 48213 1370 ## COG0337 3-dehydroquinate synthetase 56 25 Op 7 5/0.000 - CDS 48200 - 49078 864 ## COG0287 Prephenate dehydrogenase 57 25 Op 8 . - CDS 49088 - 50107 1186 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Term 50381 - 50417 1.7 58 26 Op 1 . - CDS 50450 - 51379 941 ## COG0726 Predicted xylanase/chitin deacetylase 59 26 Op 2 . - CDS 51382 - 52167 724 ## Vpar_0287 hypothetical protein 60 26 Op 3 . - CDS 52194 - 52946 970 ## Despr_2752 molybdopterin dehydrogenase FAD-binding protein 61 26 Op 4 . - CDS 52972 - 53664 713 ## BBR47_09720 hypothetical protein - Prom 53688 - 53747 6.4 62 27 Tu 1 . - CDS 53785 - 54159 564 ## COG0239 Integral membrane protein possibly involved in chromosome condensation - Prom 54215 - 54274 5.8 + Prom 54274 - 54333 6.9 63 28 Tu 1 . + CDS 54375 - 54596 116 ## gi|290968019|ref|ZP_06559568.1| hypothetical protein HMPREF0889_0565 + Term 54608 - 54645 7.0 - Term 54584 - 54642 12.4 64 29 Op 1 9/0.000 - CDS 54656 - 55540 1204 ## COG1760 L-serine deaminase 65 29 Op 2 . - CDS 55551 - 56210 999 ## COG1760 L-serine deaminase 66 29 Op 3 8/0.000 - CDS 56232 - 59885 3261 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 67 29 Op 4 . - CDS 59872 - 63246 2787 ## COG3857 ATP-dependent nuclease, subunit B - Prom 63348 - 63407 6.2 68 30 Op 1 . - CDS 63414 - 64457 1293 ## COG1397 ADP-ribosylglycohydrolase 69 30 Op 2 . - CDS 64483 - 65427 1036 ## COG3965 Predicted Co/Zn/Cd cation transporters - Prom 65631 - 65690 7.9 + Prom 65588 - 65647 5.1 70 31 Tu 1 . + CDS 65790 - 66677 785 ## COG0668 Small-conductance mechanosensitive channel + Term 66685 - 66745 17.4 - Term 66681 - 66727 16.1 71 32 Op 1 . - CDS 66737 - 68074 1394 ## COG0427 Acetyl-CoA hydrolase 72 32 Op 2 11/0.000 - CDS 68079 - 68696 862 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 73 32 Op 3 . - CDS 68697 - 70478 1881 ## COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits - Prom 70622 - 70681 6.1 + Prom 70575 - 70634 6.2 74 33 Tu 1 . + CDS 70680 - 72545 1505 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains + Term 72570 - 72613 15.4 - Term 72558 - 72601 15.4 75 34 Tu 1 . - CDS 72623 - 77359 4882 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 77478 - 77537 8.4 - Term 77582 - 77623 13.4 76 35 Tu 1 . - CDS 77645 - 78958 1858 ## COG0814 Amino acid permeases - Prom 79021 - 79080 8.4 77 36 Tu 1 . + CDS 78861 - 79052 67 ## + Term 79084 - 79122 7.1 - Term 79069 - 79113 12.5 78 37 Tu 1 . - CDS 79127 - 80314 1428 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 80347 - 80406 4.9 - TRNA 80448 - 80524 85.3 # Met CAT 0 0 - TRNA 80530 - 80605 81.8 # Thr GGT 0 0 - TRNA 80671 - 80746 91.3 # Met CAT 0 0 - TRNA 80751 - 80836 72.2 # Tyr GTA 0 0 - TRNA 80844 - 80919 95.2 # Thr TGT 0 0 + Prom 81051 - 81110 7.5 79 38 Tu 1 . + CDS 81254 - 84688 3468 ## COG1038 Pyruvate carboxylase + Term 84703 - 84754 10.6 + Prom 84722 - 84781 3.4 80 39 Tu 1 . + CDS 84818 - 85654 1000 ## COG1432 Uncharacterized conserved protein + Term 85659 - 85695 9.6 - Term 85692 - 85722 1.1 81 40 Tu 1 . - CDS 85730 - 85927 274 ## gi|290968038|ref|ZP_06559587.1| putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein + Prom 85880 - 85939 4.2 82 41 Tu 1 . + CDS 86047 - 87060 1061 ## COG1609 Transcriptional regulators - Term 87070 - 87119 1.1 83 42 Tu 1 . - CDS 87163 - 88455 1799 ## COG0015 Adenylosuccinate lyase - Prom 88504 - 88563 5.5 - Term 88537 - 88601 8.4 84 43 Tu 1 . - CDS 88614 - 89696 290 ## PROTEIN SUPPORTED gi|167854911|ref|ZP_02477687.1| ribosomal protein L11 methyltransferase - Prom 89788 - 89847 6.8 - Term 89993 - 90026 1.3 85 44 Tu 1 . - CDS 90037 - 91434 1716 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 91465 - 91524 3.3 + Prom 91481 - 91540 6.8 86 45 Tu 1 . + CDS 91575 - 92006 395 ## gi|290968043|ref|ZP_06559592.1| hypothetical protein HMPREF0889_0594 + Term 92209 - 92247 3.1 - Term 92195 - 92235 8.1 87 46 Tu 1 . - CDS 92396 - 93349 491 ## COG4823 Abortive infection bacteriophage resistance protein - Prom 93405 - 93464 9.5 - TRNA 93630 - 93715 54.9 # Leu GAG 0 0 - Term 93578 - 93618 8.1 88 47 Tu 1 . - CDS 93673 - 93939 149 ## - Prom 94018 - 94077 3.1 - TRNA 93729 - 93804 89.8 # Phe GAA 0 0 - TRNA 93810 - 93886 68.5 # Asp GTC 0 0 + Prom 93996 - 94055 6.3 89 48 Op 1 . + CDS 94087 - 96735 3001 ## COG0474 Cation transport ATPase 90 48 Op 2 . + CDS 96748 - 97254 509 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 97265 - 97319 12.7 + Prom 97263 - 97322 12.0 91 49 Op 1 . + CDS 97350 - 100097 2694 ## COG0474 Cation transport ATPase + Term 100111 - 100159 10.8 + Prom 100181 - 100240 7.0 92 49 Op 2 . + CDS 100284 - 102143 1647 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 102167 - 102208 12.0 - Term 102155 - 102196 12.0 93 50 Op 1 37/0.000 - CDS 102220 - 103011 443 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 94 50 Op 2 23/0.000 - CDS 103004 - 104188 1618 ## COG0133 Tryptophan synthase beta chain 95 50 Op 3 9/0.000 - CDS 104190 - 104789 497 ## COG0135 Phosphoribosylanthranilate isomerase 96 50 Op 4 21/0.000 - CDS 104786 - 105568 809 ## COG0134 Indole-3-glycerol phosphate synthase 97 50 Op 5 . - CDS 105565 - 106119 510 ## COG0547 Anthranilate phosphoribosyltransferase 98 50 Op 6 13/0.000 - CDS 106116 - 106589 497 ## COG0547 Anthranilate phosphoribosyltransferase 99 50 Op 7 35/0.000 - CDS 106602 - 107168 461 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 100 50 Op 8 . - CDS 107149 - 108630 1717 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - TRNA 109146 - 109221 90.1 # Val TAC 0 0 - TRNA 109227 - 109302 71.7 # Glu TTC 0 0 - TRNA 109313 - 109388 87.5 # Lys TTT 0 0 - TRNA 109400 - 109473 73.2 # Gln CTG 0 0 - TRNA 109477 - 109552 89.7 # Asn GTT 0 0 - TRNA 109558 - 109632 88.2 # Gly GCC 0 0 - Term 109548 - 109594 -1.0 101 51 Tu 1 . - CDS 109794 - 110102 61 ## + Prom 110041 - 110100 7.9 102 52 Tu 1 . + CDS 110327 - 111571 1326 ## LM5578_2512 hypothetical protein 103 53 Op 1 . + CDS 111681 - 111878 305 ## gi|290968058|ref|ZP_06559607.1| hypothetical protein HMPREF0889_0620 104 53 Op 2 . + CDS 111911 - 112150 430 ## gi|290968059|ref|ZP_06559608.1| conserved hypothetical protein + Term 112164 - 112205 4.1 - Term 112143 - 112199 3.1 105 54 Tu 1 . - CDS 112219 - 112938 308 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 - Prom 112963 - 113022 6.3 + Prom 113004 - 113063 7.0 106 55 Op 1 . + CDS 113105 - 115249 2232 ## COG0586 Uncharacterized membrane-associated protein 107 55 Op 2 . + CDS 115261 - 116865 1207 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 108 55 Op 3 . + CDS 116878 - 117585 706 ## Acfer_1939 hypothetical protein + Term 117697 - 117742 3.2 + Prom 117594 - 117653 9.3 109 56 Tu 1 . + CDS 117757 - 122322 4372 ## COG0069 Glutamate synthase domain 2 + Term 122335 - 122369 6.0 - Term 122311 - 122365 12.5 110 57 Tu 1 . - CDS 122372 - 122602 294 ## gi|290968066|ref|ZP_06559615.1| hypothetical protein HMPREF0889_0628 - Prom 122629 - 122688 4.1 + Prom 122683 - 122742 5.5 111 58 Tu 1 . + CDS 122794 - 123687 786 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 123811 - 123870 1.0 + Prom 123848 - 123907 2.7 112 59 Tu 1 . + CDS 123940 - 124077 154 ## gi|290968067|ref|ZP_06559616.1| putative membrane protein + Prom 124102 - 124161 5.0 113 60 Tu 1 . + CDS 124202 - 125089 1126 ## COG1032 Fe-S oxidoreductase + Term 125095 - 125129 8.3 - Term 125079 - 125121 12.6 114 61 Op 1 . - CDS 125136 - 126377 1407 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase 115 61 Op 2 . - CDS 126435 - 127436 1302 ## COG2038 NaMN:DMB phosphoribosyltransferase - Prom 127468 - 127527 6.8 - Term 127525 - 127570 7.3 116 62 Tu 1 . - CDS 127583 - 128626 1095 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 128669 - 128728 10.6 + Prom 128881 - 128940 8.7 117 63 Tu 1 . + CDS 129025 - 130911 1935 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 130931 - 130965 5.2 - Term 130991 - 131038 12.7 118 64 Op 1 21/0.000 - CDS 131045 - 131275 345 ## PROTEIN SUPPORTED gi|227372736|ref|ZP_03856216.1| SSU ribosomal protein S18P 119 64 Op 2 24/0.000 - CDS 131319 - 131732 565 ## COG0629 Single-stranded DNA-binding protein 120 64 Op 3 . - CDS 131749 - 132033 299 ## PROTEIN SUPPORTED gi|227372738|ref|ZP_03856218.1| SSU ribosomal protein S6P - Prom 132085 - 132144 3.5 121 65 Tu 1 . - CDS 132150 - 135893 4507 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 135942 - 136001 8.0 + Prom 136012 - 136071 5.9 122 66 Op 1 . + CDS 136105 - 136701 659 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 123 66 Op 2 . + CDS 136698 - 136877 178 ## gi|290968080|ref|ZP_06559629.1| hypothetical protein HMPREF0889_0642 124 66 Op 3 . + CDS 136880 - 137308 397 ## gi|290968081|ref|ZP_06559630.1| hypothetical protein HMPREF0889_0643 + Term 137318 - 137353 5.1 - Term 137305 - 137339 4.9 125 67 Tu 1 . - CDS 137369 - 138715 1822 ## COG0427 Acetyl-CoA hydrolase - Prom 138767 - 138826 7.5 126 68 Tu 1 . - CDS 138831 - 140120 1298 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog - Prom 140154 - 140213 7.9 - Term 140335 - 140368 5.4 127 69 Tu 1 . - CDS 140388 - 141335 1288 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 141368 - 141427 7.5 128 70 Tu 1 . - CDS 141455 - 142009 539 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 142075 - 142134 4.7 + Prom 141984 - 142043 5.8 129 71 Tu 1 . + CDS 142085 - 142810 416 ## COG1451 Predicted metal-dependent hydrolase + Term 142829 - 142870 3.2 - Term 142817 - 142857 6.8 130 72 Op 1 . - CDS 142863 - 143789 1028 ## COG0739 Membrane proteins related to metalloendopeptidases 131 72 Op 2 . - CDS 143808 - 144335 679 ## Vpar_1845 hypothetical protein 132 72 Op 3 25/0.000 - CDS 144377 - 145294 1038 ## COG1475 Predicted transcriptional regulators 133 72 Op 4 . - CDS 145284 - 146111 1088 ## COG1192 ATPases involved in chromosome partitioning - Prom 146146 - 146205 5.4 + Prom 146143 - 146202 8.2 134 73 Tu 1 . + CDS 146238 - 146894 642 ## Vpar_1849 vitamin B12 dependent methionine synthase activation region + Term 146959 - 147000 11.1 135 74 Tu 1 . - CDS 147064 - 148347 1568 ## COG0104 Adenylosuccinate synthase - Prom 148493 - 148552 7.5 + Prom 148477 - 148536 11.4 136 75 Op 1 . + CDS 148573 - 149679 1021 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Prom 149683 - 149742 3.1 137 75 Op 2 . + CDS 149764 - 150429 501 ## gi|290968094|ref|ZP_06559643.1| hypothetical protein HMPREF0889_0656 138 75 Op 3 . + CDS 150422 - 150829 521 ## COG3874 Uncharacterized conserved protein + Prom 150844 - 150903 7.4 139 76 Tu 1 . + CDS 150943 - 151371 648 ## gi|290968096|ref|ZP_06559645.1| outer membrane protein + Term 151385 - 151429 6.6 + Prom 151416 - 151475 10.3 140 77 Op 1 4/0.000 + CDS 151526 - 151813 420 ## COG1937 Uncharacterized protein conserved in bacteria 141 77 Op 2 . + CDS 151823 - 154594 2497 ## COG2217 Cation transport ATPase + Term 154619 - 154669 18.6 - Term 154603 - 154661 18.2 142 78 Tu 1 . - CDS 154674 - 159128 5708 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|290781863|gb|ADGP01000009.1| GENE 1 175 - 609 559 144 aa, chain - ## HITS:1 COG:no KEGG:Selsp_1718 NR:ns ## KEGG: Selsp_1718 # Name: not_defined # Def: flavodoxin/nitric oxide synthase # Organism: S.sputigena # Pathway: not_defined # 1 111 1 111 171 94 42.0 1e-18 MKTIVLYSSYTGKTKGIAEAVAQGIGADTPCVSLDAIPADIDTYECVFFGCYIESGFIDA KSQEILKTIHNKKVAIFVTMWIGPYSDDIAKRLRRIVEFLPHGCQIVGTYITPVDDAAGD QQEREHRLAADFAANTMHRLMSAQ >gi|290781863|gb|ADGP01000009.1| GENE 2 807 - 1721 522 304 aa, chain + ## HITS:1 COG:Cgl1065 KEGG:ns NR:ns ## COG: Cgl1065 COG1893 # Protein_GI_number: 19552315 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Corynebacterium glutamicum # 1 297 1 292 300 89 27.0 1e-17 MKIMITGIGGVGGYIASILCMHYPQVTLIARGERKNALLRDGLRLYSDLLGTHCFHPAVT DTPAAAGVQDVLFVCVKNPSLAEALQALQPCIGAHTVLCCIMNGVSYAQIAAQIFPHVPL VETCIYITSAYEADYTIRQRGKYAHLYLGAATDVPHRQVLQILQHNGLKCTATPAIQQEI WCKYILNCAYNVSTAYFKSDVAYIFSSPRRQNEFRLLLQEAAAVGRGLGIDLPFSIEETI YNRVAAQKDKTVTSSLARDIRQGRAGELETFSGYIVKTAAALGIPVPYSRKYYTTLQEYC RTGA >gi|290781863|gb|ADGP01000009.1| GENE 3 1731 - 2144 469 137 aa, chain - ## HITS:1 COG:FN0816 KEGG:ns NR:ns ## COG: FN0816 COG2030 # Protein_GI_number: 19704151 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Fusobacterium nucleatum # 4 137 1 134 134 128 45.0 3e-30 MNDIAYRDITVGMTASLKKTITQADVEKFAAVTGDYNPLHMDEEFAGKTIFRGRIAHGMI TGGLISAVLGTELPGKNTLYLEQELKFLAPVRFGDTLVATVECIEKEDRRHKLVFKTVVT NQNGTVVTSGKALVRKR >gi|290781863|gb|ADGP01000009.1| GENE 4 2287 - 3432 1560 381 aa, chain - ## HITS:1 COG:BH3798 KEGG:ns NR:ns ## COG: BH3798 COG1960 # Protein_GI_number: 15616360 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Bacillus halodurans # 1 380 1 377 380 424 59.0 1e-118 MDFKLSETQQDIAKLARDFAEKKLAPTVKDRDEKEVFDRTLVDEMGELGLLGIPWEEKDG GVGADFVSVAVACEEVAKVDPSIALSFEVHTMLCSWPIWKFGTEEQKAKYLKPLAEGKKL GAFGLTEPNAGTDALNGSTTATKNADGTYTLNGSKVFNTNGGDAEITIVFAATDKSKGAK GMSAFIVEKGTPGFSYGKKEVKMGIRACVQRELVFQDVVVPAANLLGKEGEGFKIAMMTL DGGRVGVGAQALGIAEGAFNKAVQYANERIQFGKPIMKQQAVAFMLADMKLKIETARWAV YKAAWKMGQKDVKSYSMDASIAKKYASDIAMQVTTDAVQVFGGYGFTRDYPVERYMRDAK ITQIYEGTNQVQQMIISGFLK >gi|290781863|gb|ADGP01000009.1| GENE 5 3571 - 4692 1273 373 aa, chain - ## HITS:1 COG:FN0208 KEGG:ns NR:ns ## COG: FN0208 COG1775 # Protein_GI_number: 19703553 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 1 373 1 377 382 236 37.0 6e-62 MSKIDELISKFQEVSNHPQQTVLKYKKETGKGLVGMMPYYAPEEIVYAAGYLPVGLFGAQ NPKIAAARTYLPPFACSLMQADMELQLNGTYDCLDAVIFSVPCDTLRCMSQKWHGKAPVV VFTHPQNRKIRAAVDFLRAEYEHVRTELERYLHVNITDMAIQEAIKVYNENRRIMREFCD VAALYPQIFTPVKRHDVIKARWFMDKAVHTQWVRELIDTVKAEKVEPWHGKKVVISGIMA EPDEFLNIFQEFNLAVVADDLAQESRQFRTDVPEGIDPLEQLAQQWQDFDGCPLALNADK PRGQMLIDMTKKYDADAVVICMFRFCDPEEFDYPIYKTEFEDAGVRYTTVDVDLESPSLE QVRTRIQAFSEIL >gi|290781863|gb|ADGP01000009.1| GENE 6 4692 - 5978 1265 428 aa, chain - ## HITS:1 COG:FN0207 KEGG:ns NR:ns ## COG: FN0207 COG1775 # Protein_GI_number: 19703552 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 24 424 32 416 442 294 40.0 2e-79 MSEEKTIDIESMSAKDALGYFLPKVDEDARQAKKEGRLVCWSASVAPPEFCTAMDIALVY PETHAAGIGARHGSPALLEVAENKGYDQDICSYCRVNMGYMELMKQQTETGVTPATLESS PASRVPLPDVVLTCNNICNTLLKWYENLAKELNVPLINIDVPFNHEYPITKHAKRYIVGE FKEAIRQLEELCGRPFDYDKFFEVQRQTQRSIAAWNKIATYFKYKPSPLNGFDLFNFMGL AVAARSLNYAEITFTKFANELEEKVKNQKWAFGDNEKSRVTWEGIAVWIALGHTFKELKG HGSLMAGSAYPGMWDVSYEPGNLESMAEAYSRTYINCCLEQRGSVLEKVCRDGKCDGLIL HQNRSCKNMSLLNNEGGQRVQKNLGIPYVIFDGDQTDPRNFSEAQFDTRVEALCETMDEQ KEREGGNQ >gi|290781863|gb|ADGP01000009.1| GENE 7 6000 - 6776 998 258 aa, chain - ## HITS:1 COG:FN0206 KEGG:ns NR:ns ## COG: FN0206 COG1924 # Protein_GI_number: 19703551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 1 255 4 259 265 246 50.0 4e-65 MYTLGIDVGSSSSKAVILQDGKTVVAHAVVEIGTGSSGPERVLKDVFEGTNLTLDDMANI ISTGYGRFNVAYAKGEISEITCHAKGALFECPGTLTILDIGGQDVKAIKLNKQGMVMQFA MNDKCAAGTGRFLDVMSKVLEIPISDMGKWYFKSKNPAPVSSTCTVFAESEVISLLSKNI PKEDIVAGVHKSIASKASALVRRVGVEGSLTMTGGGARDPGVVDAISKELGVEVKVADHP QVIGALGAALLAYEKIKK >gi|290781863|gb|ADGP01000009.1| GENE 8 6816 - 7733 1134 305 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_2371 NR:ns ## KEGG: NT01CX_2371 # Name: not_defined # Def: 4-hydroxyphenylpyruvate dioxygenase C terminal domain-containing protein (EC:4.4.1.5) # Organism: C.novyi # Pathway: Pyruvate metabolism [PATH:cno00620] # 1 136 1 135 137 189 71.0 9e-47 MKPMRLHHVGIVLPTLEKAHEFMQNNGLEIDYAGYVNAYHANLIFTKKGEYSSPIEMIIP TSGVLTEFNGGRGGIAHIAFEVDDVEAVRKEMEEECPGCMLEKKAVQGTDDIIVNFRRPK TNHGILVEYVETMAPIVGHDKDPFVETMGAEKGKLKSSWHPMRLHHVGIVLPTMEAAHDF MKTNGLEVDYAGFVDAYHADLIFTKKGEYSSPIEFIVPREGVLKNFNGGRGGIAHIAFEV DDVEAVRQTMEKESDGCMLEKKAVQGTDDIIVNFRRPSTDAGILVEYVQTTAPINRKNPN PFPDL >gi|290781863|gb|ADGP01000009.1| GENE 9 7774 - 9327 1769 517 aa, chain - ## HITS:1 COG:BH3898 KEGG:ns NR:ns ## COG: BH3898 COG4670 # Protein_GI_number: 15616460 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Bacillus halodurans # 3 515 2 514 525 514 52.0 1e-145 MRKVKIITAAEAANLVKDNDTLTTMGFVGCSHPEALTKALEKRFLETGSPKNLTYLYSAS QGTRKGVAGEHLAHEGLLKRLIIGHYQTVPALAALAIDNKIEAYNYSQGTMCHLFRAIAG KKIGVFTDVGLHTFLDPRNGGGRVNKRTTEDLVKVVHVEGQELLFYPTFPISIAFLRGTY ADEAGNITTHEEVAPLENLTVAQAVHNCGGIVVVQVRKVVKHGSLDPRMVTIPGIYVDYV VEADSADHEQAFGCEYDPSLSGAARVPAGVGGEMIPLDAKKIIGRRGALALKDDVVVNLG VGAPEYVATVAGEEGISDRFTLTVENGALGGVPQGGPQFGATRNPEAFVAQDYQFDFYDG GGLDMAFLGLAQCSESGDINVSRFGPRIAGCGGFVHISQKTPNVYFCGTFTNGGLRVAVE NGKVKILQEGKSKKFIKAVDQVTFNGAYAAQMGKNVWYITERCVFKLTAEGLKLMEVAPG IDVEKDILAQMDFKPIIEDYTTMDARIFNEGVMGLKK >gi|290781863|gb|ADGP01000009.1| GENE 10 10022 - 10765 726 247 aa, chain + ## HITS:1 COG:STM1358 KEGG:ns NR:ns ## COG: STM1358 COG0710 # Protein_GI_number: 16764709 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Salmonella typhimurium LT2 # 2 243 4 246 252 142 33.0 7e-34 MLTIGSLAFRPPFPKLCVPITATSREDLQSQCQALQHRKYDLIEFRYDYFGAAMSATHVH TVLATLRRELPHVPLLFTLRTEKEGGKYALPEIEYAKITQAALADAAVDAIDMEYTLSPA LRTPLCRQAQARNLPVVLSFHNFRETPSHASVQQQLEAMYACRPAITKVAYMPQTPQDVL TVFQCSLQFTRRHPQAPLIALSMGNLGRITRIGGTVFGSIMTFADGVRPSAPGQLPADLL YTLRDYV >gi|290781863|gb|ADGP01000009.1| GENE 11 10843 - 11298 513 151 aa, chain - ## HITS:1 COG:CAC2339 KEGG:ns NR:ns ## COG: CAC2339 COG1683 # Protein_GI_number: 15895606 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 137 6 148 150 121 43.0 4e-28 MRILISACLLGLYCRYDGKICHYASIRRLVEQYDWQWIPCCPEQAGGLPTPRVPAERCGS RILTAQGREVTAAYEKGAEQAVYLAKLFQCRYAILKEKSPSCGCDRIYDGSFQHRLCAGQ GVTAERLQAMGVQVFGETQVARFLQTVQPFL >gi|290781863|gb|ADGP01000009.1| GENE 12 11425 - 13086 1704 553 aa, chain + ## HITS:1 COG:CAC3652 KEGG:ns NR:ns ## COG: CAC3652 COG0028 # Protein_GI_number: 15896885 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Clostridium acetobutylicum # 3 548 18 562 563 690 60.0 0 MAESKQTRTTADLLVECLEEEGVHYIFGIPGEENLAVMEAISRSKIEFITVRHEQGAAFM ADVYGRLTGKAGVCMATLGPGATNLITGVADADCDGAPLVAISGQVGTDKMHITAHQYLD LRAMFEPITRRAYTVVRPDTVAEITRLAFKYAEREKPGATFIDLPVNISKMPVGEQERPL RHKTILAEKALDEQIMAAAHAVSYAKNPVILAGSGVIRSGASEVLTQFAEKLKIPVINTM MAKGAIPFDNPYSLWTTGIPMADYQTKVLEKASVVIAIGYDIIEYAPAKWHANNADIIHI DTMPADINKTYQPIVEVVGNIPDSLTRIMEHAARLQEPTYALSIRRRMIDEHNSYADDKA FPVKPQKALIDCRKVMGEDDIVISDVGANKVWIARHYNCYKPNSCIISNGFATMGIAVPG AIAAKLVHPDKKVLAITGDAGFMMNCQEFETAHRLGTNFVTLIFNDCSYGLIKWKQDMQY GHHHYVDFTNPDFVTFAKSVGAVGYRINSTEELLPTLIKAFKQPKPVIIDCPIDYRENLK LTDHLRELMKTID >gi|290781863|gb|ADGP01000009.1| GENE 13 13138 - 13734 494 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967970|ref|ZP_06559519.1| ## NR: gi|290967970|ref|ZP_06559519.1| hypothetical protein HMPREF0889_0514 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0514 [Megasphaera genomosp. type_1 str. 28L] # 1 198 1 198 198 397 100.0 1e-109 MKQIKTTVCRAALALLLGIGSMVCVRAETPYTVWKGWGRVPVRENVCLQETGSTAVRLSP SLAAWSRKLMGSEPQAVYSIVVKDNCSFYYARLYTYEFAAPYGSPVNLLQQWGKQWQHRM DGAGYMTVPLHICRQQGLWLEGKVLYPAVTEGTDIQDAGYILARADGKCIRAIFLYVPEG YAPQAAKTILSMLKQGKE >gi|290781863|gb|ADGP01000009.1| GENE 14 13866 - 14276 658 136 aa, chain + ## HITS:1 COG:FN0889 KEGG:ns NR:ns ## COG: FN0889 COG5496 # Protein_GI_number: 19704224 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 10 130 7 127 127 90 41.0 5e-19 MDFEVQKNSRAEVSEKVTDANTAVAMSCGKSPVYATPAMVALMEMAAIHAVDPQLPEGTN TVGIAIDVKHLSASPVGMTVRAEATLTAQDRRHLTFTIEAFDDAGLIGTATHERFIIDSA PFLAKAEAKKKNNTQL >gi|290781863|gb|ADGP01000009.1| GENE 15 14288 - 14683 449 131 aa, chain + ## HITS:1 COG:FN0889 KEGG:ns NR:ns ## COG: FN0889 COG5496 # Protein_GI_number: 19704224 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 12 127 9 124 127 71 37.0 3e-13 MEFTIRPNSQAEASEKVTDKNTAIAMGSGKSPVYATPAMVSLMETAAIKAIDPQLPPGYN TVGIGIKVKHLSATPLDMTVTAKATVVAQDRKHFDVKIEAFDEAGLIGTAEHERFIIESQ PFLEKAKAKLK >gi|290781863|gb|ADGP01000009.1| GENE 16 14644 - 14823 106 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLSFGISVGSGEFSAAVPGIERRGRYKKAGQGRIYVLVRRKTAQIGYFNFAFAFSRNG >gi|290781863|gb|ADGP01000009.1| GENE 17 14865 - 15290 561 141 aa, chain - ## HITS:1 COG:TM0717 KEGG:ns NR:ns ## COG: TM0717 COG0511 # Protein_GI_number: 15643480 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Thermotoga maritima # 1 138 2 131 134 69 37.0 1e-12 MKKFKVTVNGQSYEVEVEEIGSVTAAAPVPAAATPASAVPAATPVSAAPAVTPAAVKAPA ATAPKEPLPEGAPTIKAPMPGKISALKAEPGQTVARGDVVVVLEAMKMQNDITAPQDGTI VELRVQVGDSVKTGDILVVLK >gi|290781863|gb|ADGP01000009.1| GENE 18 15322 - 15714 414 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967974|ref|ZP_06559523.1| ## NR: gi|290967974|ref|ZP_06559523.1| hypothetical protein HMPREF0889_0518 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0518 [Megasphaera genomosp. type_1 str. 28L] # 1 130 1 130 130 182 100.0 5e-45 MIERMVWIPVIIALICLGKQVAVLGKRLRAVERENEELRTAACTERKTATVPEAVQVPEP ESAPVPSKAATTAVPPMVPQVEAGVPPETVAVIMAAVTACGYVPTAIRAVRHTRRRSKKW IIAGRIARMR >gi|290781863|gb|ADGP01000009.1| GENE 19 15733 - 17262 1999 509 aa, chain - ## HITS:1 COG:VNG1529G KEGG:ns NR:ns ## COG: VNG1529G COG4799 # Protein_GI_number: 15790513 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Halobacterium sp. NRC-1 # 3 509 2 516 516 636 57.0 0 MATNQEKLEALQQKLATLAMGGGQKRIDKQHAGGKYTARERLDLLFDAGTFTEISQFIHH RCTNFGMQEKEIPGDGVVTGYGYIHGRLVYAYAEDFTVEGGSLGEMHAKKICQVQEMALK MGAPLIGMNDSGGARIQEGIDALSGFGAIFMNNTKASGVIPQISVIMGPCAGGAVYSPAL TDFVFMVKQTSNMFITGPSVIKAVIGEEVTAEELGGAVTHSTVSGVTHFACENETDCMEK IKTLLDFIPGNNMEDAPYVEPTDDADRQEERLNAIIPDQANASYDMLEVIQACVDDGRVF QIMETYARNMITGFARLDGQTVGIIANQPQFLAGCLDIDASVKAARFIRYCDAFNIPLVT FVDVPGFLPGSDQEHGGIIRHGAKMLYAYCEATVPKVTVVVRKAYGGAYIGMCSRNLGAD MVFAWPMAEIAVLGAEGAANIIFRHDPQKEEKKKEYEKEFQTPYKAAEHGYVDCIIEPKE TRPRLIDALAMLCSKREDRPQKKHGNIPL >gi|290781863|gb|ADGP01000009.1| GENE 20 17369 - 17653 104 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCKKVKSSRHPTIREVTNTEQKNERSETAPVRNVEIWRKGWDSNPRCVAASLVFKTSSLN HSDTFPQCVHYSKCPIHRQVNHKAVLPLHRVMAV >gi|290781863|gb|ADGP01000009.1| GENE 21 17691 - 18437 717 248 aa, chain - ## HITS:1 COG:TVN0442 KEGG:ns NR:ns ## COG: TVN0442 COG0863 # Protein_GI_number: 13541273 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Thermoplasma volcanium # 7 248 98 346 347 139 32.0 5e-33 MGKKIVKWEPEDFELEMTTHWSFPKRGDWATHDAKWRGNWSPYIPRNILLRYSEENDLVL DQFAGGGTTLVEAKLLNRNIIGVDVNETALARCREKINFEHSGANGKVYLYKGDARTLDF IKDNSIDLICTHPPYADIIKYSEDIEADLSHLKVKDFLIAMRDVAAESYRVLKKDKFCAV LMGDTRQKGHMIPMSFEVMKLFQSAGFKLKELVIKEQHNCKATGYWKTNSVKYNFLLIAH EYLFIFRK >gi|290781863|gb|ADGP01000009.1| GENE 22 18437 - 19318 701 293 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0626 NR:ns ## KEGG: Selsp_0626 # Name: not_defined # Def: Type II site-specific deoxyribonuclease (EC:3.1.21.4) # Organism: S.sputigena # Pathway: not_defined # 1 291 36 326 328 498 84.0 1e-139 MKKRDFNTWLLGFRDSIADYGYYIDFNKVHRNVAGIKVALNILNSLIGSKNIAEDFKILI RKYPEVLQCIPLLLAVRAKEIYCQDENGGHLYQFDIRKYSTDRDTCCAQYVYFMEHTGLF DLLENHIINNLVDYVTGVETGLDSNGRKNRGGHLMENVVERFIQKAGFIKEVNYFKEIYI HQITDKWQIDLSAISNQGKMEKRFDFVVKTPHMIYGIETNFYGSGGSKLNETARSYKTLA WETEGIKGFTFVWFTDGKGWTSARHNLEETFDVMQHIYNIKDLENGIMNEVFK >gi|290781863|gb|ADGP01000009.1| GENE 23 19400 - 20470 779 356 aa, chain - ## HITS:1 COG:slr1803 KEGG:ns NR:ns ## COG: slr1803 COG0338 # Protein_GI_number: 16330320 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Synechocystis # 65 356 9 307 309 295 47.0 1e-79 MEYMSAKEAADKWEISQKRVTVLCAEHKIHQATMAGNTWIIPVTAEKPIESGCIQNDKKT GKMIKPFLKWAGGKGQLLREIATYYPFEKDGIKKYAEPFVGGGAVLFDILSKYELEEVYI SDINAELINAYSRIRDTVDELVRMLYTMQEAFIPMAPDKRKGYYSAKRARFNALKISDRG TDSVEKAALMIFLNKTCFNGLFRVNKKGEFNVPMGAYKNPLICDESNLRALARKLQKVTI VCGDYRRSKDFIDEHTFVYFDPPYRPLTDTASFTAYTENLFNDDSQKELARFVDEMHGRG AKLLISNSDPKNFDAEDNFFDDIYSAHNIKRVEATRMINCKGASRGKIKELLISNF >gi|290781863|gb|ADGP01000009.1| GENE 24 20605 - 21741 1419 378 aa, chain - ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 13 345 18 330 350 268 40.0 1e-71 MGRTDILYKKHKTRQDLRTLLSWTDPDLCQALYAAAYDVKVRNVGAVVYYRGLIEFSNEC IKNCRYCGIRRGNTSVKRFRTEREDILSMADWTYRNQYGSITLQSGERQDEEFITYVEGL IRDIKTLSHGELGITLCVGEQEDRAYERWFAAGAHRYLLRIETGNPALYATLHPQDGHHV WQVRKQCLQTLRRIGYQVGTGDMIGLPGQTLDDLVDDILFYQQMDIDMIGMGPYVVHHNT PVGKEVLQAGLDSEAEKRRRLRLGLNMIAVTRLVLPDVNIAATTALQALHPLGRELGLKA GANVLMPIVTLPKFRPQYVLYDNKPCVDENPQQCRHCLQARVASVGDVVGFGKWGDAPHF FHTRRESAQGSKSSENGI >gi|290781863|gb|ADGP01000009.1| GENE 25 21945 - 22775 1138 276 aa, chain - ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 4 273 273 204 46.0 2e-52 MHDSIIAVILGIVEGLTEYLPVSSTGHMILVGDWLGFTGPRSTVFEVFIQLGAILSVLVI YKATFWRMLQQYRCLHLLRRENWLRRDTGLTLAHVGVGIIPVMIIGFFAHHAIKTYLFSP GTVIIGLIAGGIVMLAAEKAHVRTVCRDVQHMTLVQAFFVGMFQIFALWPGFSRSGSTLA GGLFLGISRKAAADFSFIIAVPVMIVACCFDLIKSLSLLSGNDLLMIVIGFVVAFFVAYI SVLWFLKFLNRSTLASFAYYRFLVALISLLYFFILT >gi|290781863|gb|ADGP01000009.1| GENE 26 22913 - 23878 1290 321 aa, chain - ## HITS:1 COG:BH3783 KEGG:ns NR:ns ## COG: BH3783 COG1494 # Protein_GI_number: 15616345 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Bacillus halodurans # 1 313 1 314 321 347 57.0 2e-95 MDRLLTLEFVRVTEAAAIRAGRLMGKGNKAASDQLAVDGMHAVLAGVPIDGTVVIGEGEM DAAPMLYIGEKVGAGGTPVDIAVDPLEGTNLTAKGQDGSIAVIAIAGKGNLLHAPDMYME KLCVGPRAKGRIDLNLPIAENLRRVAEGLERSIDDLTVVILDRERHAEMIRQCREAGARI KLITDGDVSPAVDIGIEGSGVHLLMGIGGAPEGVLAAAALKCLGGDMQARLIPYTEAERQ RCAAMGIRDVNTVLTIDDLVKGDDCIFSATAITNTPLLRGIQYFGGGARTMSVVMRYKSG TIRVIDTFHRFDKNAKWRVHF >gi|290781863|gb|ADGP01000009.1| GENE 27 24020 - 25294 1421 424 aa, chain - ## HITS:1 COG:BS_serS KEGG:ns NR:ns ## COG: BS_serS COG0172 # Protein_GI_number: 16077081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Bacillus subtilis # 1 418 1 417 425 523 60.0 1e-148 MLDAKFVRENLEAVRENIKNRNAHVDLDAFIALDSKRRTLIQQVETMKNERNTVTQEISR LKRNKEDASALIEAMKKLGDTIAVQDKEIHQVAEALRQIQLMIPNMCHPSVPVGKDDSQN PEVRKWGEPTNFSFTPKEHWEIGENLGILDAERAAKVAGARFYYYIGAGARLERAVYNFM LDRHTEKDGYTEVIPPYIVNRKAMTGTGQLPKFSEDMYQLQVEGQDMFLIPTAEVPLTNY YSGEILRADQLPVYVTALTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYTTPESSYDEL DKLTRNAEDILKALELPYHVVCLCTGDIGFSAAKTFDVEVWFPAQGKYREISSCSNTEDF QARRANIRFRRDTKAKPEYVHTLNGSGLAVGRTVAAILENYQQADGSVAVPEVLRPYMHC DVIK >gi|290781863|gb|ADGP01000009.1| GENE 28 25365 - 26003 629 212 aa, chain - ## HITS:1 COG:aq_1990 KEGG:ns NR:ns ## COG: aq_1990 COG0406 # Protein_GI_number: 15606984 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Aquifex aeolicus # 1 212 1 212 212 145 34.0 6e-35 MVRIILVRHGETEWNAAGRFQGQEDTQLSRLGRQQGQQLAQALQDVPLQAVIASPLQRAA VTAGFCAAAHGLPVHTDRRLLEINHGRWEGMTAAEVQEQYKELFLQWHRAPHTVQMPGGE SLADMQVRIREAMREYCRQYERQTVLIVAHDAVNKVAVCSALGLPLQAFWQIKQDNTCIN VLEYDRDCWRLVLLNSVAHRGGLFIAEEQKGL >gi|290781863|gb|ADGP01000009.1| GENE 29 26013 - 27605 2013 530 aa, chain - ## HITS:1 COG:MA0592 KEGG:ns NR:ns ## COG: MA0592 COG0111 # Protein_GI_number: 20089481 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 1 525 1 521 523 441 44.0 1e-123 MKILVSDDVAVEGVNLLRHNGYDVDIKVNLDEKALISCIGAYDGLITRSMTHVTEAVIEA AGKLKVIGRAGVGVDSIDIKTATQRGIIVVNAPTANTVAATEHTCAMIMAITRHIPQAHN SLMAGEWQRERFTGIQLKDKTIGIIGVGRIGSRIAKRMQAMEMRTIGYDPYIPAERGQQL GVELVDLDTLLASADYITLHTPLTKETRGMIGAAEIAKMKRGVRVINVSRGAVLDIQALA AALQSGQVAGAAIDVFPEEPLTQDINPFLHMDQVVLTPHLGASTVEAQIGVSVDVAKGVM AALQGEPVPTAVNMAPVPPNVYNVIRPYFDLLERMGIMGVYLADGPMREIQVEYTGALAD TETRLLTTAALKGALNPILQDAVNFVNAADVAKTRQVTVKEIKSQASDTFLDAVSLRIRT EKGEHTLVGMLFNKKEPKIVQIDSCRVDFTPEGYLLLAPHRDEPNMIGQISTVLGQAGIN ITSMQVGRMNEDGTNIMAIAVAEDIPNDIMLKLRAIDGILDMKLIHCELH >gi|290781863|gb|ADGP01000009.1| GENE 30 27623 - 28135 606 170 aa, chain - ## HITS:1 COG:BH1188 KEGG:ns NR:ns ## COG: BH1188 COG1932 # Protein_GI_number: 15613751 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Bacillus halodurans # 5 170 195 360 361 194 53.0 8e-50 MQEPKKNIGPAGVVVAIIKDSLVAGANPDVPAMLRYDTYVKHDSVYNTPPVFAIYFIHEV LQWLEREGGPEEMARRNERKAAMIYEVIDDSDGFYRGHADKNSRSRMNITFNLPTPAYEE AFIRESEQHHFVGLKGHRSLGGCRASLYNAVTEESCTALAQFMKTFRKNH >gi|290781863|gb|ADGP01000009.1| GENE 31 28026 - 28697 453 223 aa, chain - ## HITS:1 COG:BH1188 KEGG:ns NR:ns ## COG: BH1188 COG1932 # Protein_GI_number: 15613751 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Bacillus halodurans # 1 193 1 196 361 205 50.0 5e-53 MQRVHNFNAGPSAMPLAVLQKVQAEFLDFAGTGMSIVEISHRSERYQQLQEETKQTLRRL LHIPDGYHIIFLQGGGSLQFVMHSANFLRRRGAYVNTGVWSDKAMAAAAAYGEVYEAASS KKDGFSYIPRLTEGAIREATDYLYITSNNTIHGTQWASYPKVSVPLFGDVSSDFLSRPIP IERFDFLFAGAQKKYRSGRRGGCDYKRFVSSRGQSRCTGHVAL >gi|290781863|gb|ADGP01000009.1| GENE 32 28795 - 28941 82 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967987|ref|ZP_06559536.1| ## NR: gi|290967987|ref|ZP_06559536.1| hypothetical protein HMPREF0889_0533 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0533 [Megasphaera genomosp. type_1 str. 28L] # 1 48 1 48 48 79 100.0 6e-14 MYSKETMKEKELVFSLQRADGAGSRYEGEGIRSGVANDEFDGSRPLLR >gi|290781863|gb|ADGP01000009.1| GENE 33 29017 - 29961 1029 314 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0353 NR:ns ## KEGG: Vpar_0353 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 308 2 310 312 130 28.0 1e-28 METATIILPFVGAGLVGALFSRFTGMNLSMCMLCIFLYMGATPEQTLAVLLMFNAFTYFT TYSQTHPVQFSTFTFFKGAKFIIPIVITFALAMVQPFFGIVFFVIVFLAEIFAKMYKATD RAVRPAKKELAKMAVIASALGLLGTAGVMLIPERFYFIAAGVVIIGFVVFIRAAADRKRW QRSWDRILYFTALIMGVTGIDASDWLGAVKRKDVSPLARMYPLVINIAIIAALIGSYVWY RYFSLAALFATIGASLGIRFFGVYRHGERGTFSYITLAITFVAVLVFMIIQPQPTGLPEF PEAHTSPVWKLLNF >gi|290781863|gb|ADGP01000009.1| GENE 34 29982 - 30569 847 195 aa, chain - ## HITS:1 COG:TM0331 KEGG:ns NR:ns ## COG: TM0331 COG0461 # Protein_GI_number: 15643099 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Thermotoga maritima # 7 195 2 187 187 191 48.0 9e-49 MMTEAAVQQLLEETKAILKGHFLLTSGLHSPLYVEKFNVLQHPQYTEMLCRELAERFRGE QVQTVMGPMTGGILLAHEVGKALGTRAIFTERENGVMTLRRGFRIAPGERVLIVEDIVTT GGSVREVVKVVEQAGGVIVGVGLLTDRSGGKADFGVPRDKVQALLHLTVPTYTADNCPLC KEGIPMTERGSHHLK >gi|290781863|gb|ADGP01000009.1| GENE 35 30576 - 31289 1025 237 aa, chain - ## HITS:1 COG:alr2983 KEGG:ns NR:ns ## COG: alr2983 COG0284 # Protein_GI_number: 17230475 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Nostoc sp. PCC 7120 # 1 230 1 230 238 189 45.0 4e-48 MVDKRIIAALDVHSFSAMKELVSRLGESISFYKVGMELFYSAGPQVVEYLKECNKQVFLD LKVHDIPHTVGESIRALTRLGADFMTVHSAGGREMMEQAAAAAQEEALRLGITRPKLLAV TVLTSMDAAAWKEIGGSDSVASSVLRLAALAKAAGIDGTVSSPQEAGDIRRQNGTDFLIV TPGIRPASAAVQDQKRIATPQQALQNGASYLVIGRPITQASDPRQAAEKIIAAIREV >gi|290781863|gb|ADGP01000009.1| GENE 36 31449 - 31613 247 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290967991|ref|ZP_06559540.1| ## NR: gi|290967991|ref|ZP_06559540.1| ferredoxin [Megasphaera genomosp. type_1 str. 28L] ferredoxin [Megasphaera genomosp. type_1 str. 28L] # 1 54 1 54 54 65 100.0 2e-09 MHVISDECVMCGSCAATCPTGAIEEGESKYVITDSCIDCGACESVCPTGAISAE >gi|290781863|gb|ADGP01000009.1| GENE 37 32041 - 33309 1000 422 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 4 409 2 417 447 389 46 1e-107 MKEKRIIHVEERLPILPTIPLSLQHLFAMFGSTVLVPFLLHVDPATALFMNGIGTLLYLT ICKWRLPAYLGSSFAFISPVLAVCAVPGMTYGDAQGGFVVFGLSFIVLAVIVDKVGTKWI DVLFPPAAMGAIVAIIGLELAPLAMTMSGYMGTAQGMTNQTAMIISTFTLAVTILTSVLG RGFLGIIPILIGVVAGYILSYFMGVVDFSKVAATPWFAFPTFYEPKFNFSAVMMIMPALF VVLAEHLGHLFVTGDIVGRNLIKDPGLHRSLFADGVSNVLSGLLGSTPNTTYGENMGVMA ITGVYSTWVIGGAAVFAVIFSFVGKIAALIHAIPVPVMGGVCILLFGFIAASGLRMLVEK RVDYTRSKNLILTAVTMISGLSGATLVIGPVQLKGMGLATVVAMVLSLIFLVFKRAKWLN NN >gi|290781863|gb|ADGP01000009.1| GENE 38 33326 - 34567 1370 413 aa, chain - ## HITS:1 COG:VC2402 KEGG:ns NR:ns ## COG: VC2402 COG0772 # Protein_GI_number: 15642399 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Vibrio cholerae # 22 389 34 391 398 200 36.0 4e-51 MKPKSKQLQKAFFWLSLSFILLLVLGTANVYSATFVAAPGVVSPTGYLLKQMVLIGLGLL VGYVAYKRDYKKMSNRIWPMIIITFLLLAAVLGVGVVVKGARRWIGLGGFTFQPSELAKI VGIIFSATVLARALETAQPLYFIRRNINKEGNCFWRHSPVLVHPVIVLASGMALFVFKQP DAGTALVIFAIPVAMLWISGAPFGKLRWPIGVGFAGLGMAIASEGYRMQRLVSWLHPWKY QSSLGYQATQSFMAIGSGGIFGQGVGNGISKFSYLPEAHTDFAFAVLAQEWGFLGVLLVM ALFCLIIVFGFRVAFQCRDRFGMLMALGITMYFGGQGLINIGMNCGIFPVIGVPLPFISY GGTSLILNMFMAALLLNICRRGYREAIQQEQAAQRVLPPSLRQETQSRFIPGK >gi|290781863|gb|ADGP01000009.1| GENE 39 34551 - 35225 761 224 aa, chain - ## HITS:1 COG:BS_ytmQ KEGG:ns NR:ns ## COG: BS_ytmQ COG0220 # Protein_GI_number: 16080042 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Bacillus subtilis # 1 207 1 205 213 209 49.0 2e-54 MRLRRKPWIDEAVKEYESFVHLKNGEEHKGRWREVFPDPQAPLWVELGTGKGNFISQMAQ LHTDVNFIGIEVQLGVLYYAGKKCAQAEVHNVHLVRFDAARLTDLFAPGEVQRFFINFCD PWPKKRHAKRRLTHGNFLARYEQVLVPQGRIDFKSDNAALFAFTLAEFQAHGWRLEEVTY DLHHSRLENEAMTEYEAKFSAKGQPIFHCAAFCPSEVTTHETQE >gi|290781863|gb|ADGP01000009.1| GENE 40 35328 - 35540 274 70 aa, chain - ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 11 63 9 61 65 67 52.0 7e-12 MEKFIRYYVGDVVQMKKPHPCGSREWEVLRIGVDFVIRCCGCGHRVMLARPKFEKAAKKI LQRREAAEEP >gi|290781863|gb|ADGP01000009.1| GENE 41 35812 - 36099 154 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967996|ref|ZP_06559545.1| ## NR: gi|290967996|ref|ZP_06559545.1| hypothetical protein HMPREF0889_0542 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0542 [Megasphaera genomosp. type_1 str. 28L] # 1 95 1 95 95 156 100.0 6e-37 MPLRSLAHTWRYISYLCYFFGTLCTLLVIALLLRISFYIACKAPPLTALSFLPVRHTPLL FLCLLGIMAAAIAFWQTGAAYRQKYDALSQQRTYR >gi|290781863|gb|ADGP01000009.1| GENE 42 36104 - 36676 356 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967997|ref|ZP_06559546.1| ## NR: gi|290967997|ref|ZP_06559546.1| hypothetical protein HMPREF0889_0543 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0543 [Megasphaera genomosp. type_1 str. 28L] # 1 190 1 190 190 380 100.0 1e-104 MKKNEFMAQLKHYFRNSEPADLQGIIEDCEEQFRLGTKKREPEEYVCYRLGHPHNIYRYY IGEPIVPEENEQLNPDRFAAYETDPHPPVRRPYDVEPASAPHRAVPEYRRTGSRAGRIFF GFLCRFFYSLMVLTCLGGIFWMNLPPYCVSEWLPLPQLSLQTLIYTVLALFFAGLTCAFL KRRCRTRRTS >gi|290781863|gb|ADGP01000009.1| GENE 43 36692 - 37237 592 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290967998|ref|ZP_06559547.1| ## NR: gi|290967998|ref|ZP_06559547.1| hypothetical protein HMPREF0889_0544 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0544 [Megasphaera genomosp. type_1 str. 28L] # 11 181 11 181 181 281 100.0 2e-74 MIKIIISFIITLVFSGLAYSSFFTIDYPNLLQWKAHYETCKTLQRELEKGTLTPEDMIAQ LKEMSPDRAMEIEDRFSKKYGNVGTTMKSVKFSLHDEAGDDTPDTSDDVPDESPANTATA AHADKKRTSADLPADAPARPAKRTPRTGKNANGPARSLKKSARTATPATDSTAGASTEES E >gi|290781863|gb|ADGP01000009.1| GENE 44 37522 - 38058 748 178 aa, chain + ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 1 178 1 179 179 191 59.0 5e-49 MELKGSKTEKNLQAAFAGESQARNKYTFYAEVAEKSGYEQIKALFEETARNEKAHAQLWF RLLHGDKLNTINDLADAAAGEHYERSDMYPTFAKEAREEGFNKIAFLFEKVGEIERHHEE RYLALLENVKNDKVFKKDEKKTWVCRNCGFIYEGNEAPKVCPVCAVPQSFFEIREENY >gi|290781863|gb|ADGP01000009.1| GENE 45 38340 - 39260 768 306 aa, chain + ## HITS:1 COG:TM1727 KEGG:ns NR:ns ## COG: TM1727 COG5495 # Protein_GI_number: 15644473 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 226 1 220 264 77 26.0 3e-14 MRIGIMGTGNMGVSFLLSLRDPANEIRIVASSPEKTRKQARLWQVQAATPRTIARQCDLL LLTVPDDVLPTLRPPTDAAHPCCVFHCSGALPVHILEPWQKRGYCIGALHPLQSIHTPRN HAFRGTYFAVDGEPAARKAGNRLVQQLGGHSFYVPEAERAAYHAAACFASNYVVTMAATA QELFRSWLRPEEAAQALFPLLKGTVENIKTAPLWRTALTGPIARGDRTTLTRHLAVLPES LRPLYCEAGMKTAALALRNGTICKEQYEQIGSILAMAKGDYHEKNNQPDHSQNEKRRHSH FHDHRL >gi|290781863|gb|ADGP01000009.1| GENE 46 39184 - 40038 798 284 aa, chain + ## HITS:1 COG:BH1687 KEGG:ns NR:ns ## COG: BH1687 COG0413 # Protein_GI_number: 15614250 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Bacillus halodurans # 5 276 3 273 279 266 50.0 3e-71 MKKITNLTIRKMKKEGTPISMITAYDVLMAQNVDEAGIDMILVGDSLGNVVMGYSSTLPV TMEDMIHHTACVVRGTKHALVVGDLPFMSYQESPAKALYNAGRMMKEAQCDAVKFEGGEA VCEAVHKITAAGIPVVGHLGLTPQSVHQLGGFRVQGKEEDTARQLLRDAKALEDAGAFAI VLECVPADLATLLTHSLKKAATIGIGAGNGCDGQVLVCTDLLGMSGGFRPKFSKTYADLH TVITGAVRTYVEDVKNRTFPKKEHTFSMADDVLQAIQKDASALH >gi|290781863|gb|ADGP01000009.1| GENE 47 40128 - 40286 107 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968002|ref|ZP_06559551.1| ## NR: gi|290968002|ref|ZP_06559551.1| hypothetical protein HMPREF0889_0548 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0548 [Megasphaera genomosp. type_1 str. 28L] # 1 52 1 52 52 89 100.0 1e-16 MSSRLPDRYSSTCIPITYRVCVFHIHNILLFHPVILYNANHIYDSFSQEDYT >gi|290781863|gb|ADGP01000009.1| GENE 48 40283 - 41461 1214 392 aa, chain + ## HITS:1 COG:no KEGG:Despr_0540 NR:ns ## KEGG: Despr_0540 # Name: not_defined # Def: type 11 methyltransferase # Organism: D.propionicus # Pathway: not_defined # 69 241 242 417 586 72 34.0 3e-11 MKRIISAAVIFTALCSYATVTADSPDDKATQALDKVNAIDQKVQTMQTDLTQHKEKVSNL EKQLGTTDGKYQQIFQGATTISKEAKEAATEAKQTADAAKQNADAAKQSAEASAQTAETA KQSAETSARKVSELENKLGGTDEKYRNLFQGTTTISKEAKEAATEAKQTATEAKQNADAA KQSAETSARTAETAKQSAEASARTAETARQSAEDAARTATTAQQTAQAIRQTAETANRTA QAAQADTREIRQLHVQNLRTVTDLQTDLQTLRHHTRQGLAKVTAVSGLRPLSFDKNAKWS LSVATGSYKNEHAVAMGAFYQPNRDMLFSFGSSLAAADNAYTFGASVRLGKGREHATAQP SDRIEELYAALAKLQAESARHKQLLLQLQAVR >gi|290781863|gb|ADGP01000009.1| GENE 49 41565 - 42530 1010 321 aa, chain - ## HITS:1 COG:BH2877 KEGG:ns NR:ns ## COG: BH2877 COG1686 # Protein_GI_number: 15615440 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 50 294 45 287 395 158 36.0 1e-38 MKWLYKGKVCLAVLGVCVWMAGGVMGTEAFSVPLPEVSSPTAEAEPVTAAESACLLDVNT GKILFSYHGNKWVHPASTTKIVTLLTALAQGRERLEQPLYISRQAVETEPSRLGLATTDK VSVREALTGMMVVSGNDAAVAVAETLGGSVPAFADMMNGQAKKMGATHSLFLNPNGLTQV HHHTTAIDMARMAAYGMKNYAEFRDIVGLKSYTMKYLDAHKPKTVYTTNRFLRSGYIGAD GIKTGYTRAAGPCLVASATRNGHTLIVALFNDAARWQDAARILDYGFRHLPQERFVPNKE RRIQPGMRGKRRGRYGKLQRV >gi|290781863|gb|ADGP01000009.1| GENE 50 42634 - 43137 394 167 aa, chain - ## HITS:1 COG:CAC0898 KEGG:ns NR:ns ## COG: CAC0898 COG0703 # Protein_GI_number: 15894185 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Clostridium acetobutylicum # 5 150 2 147 165 119 39.0 2e-27 MAVDNIILIGMPGCGKTTLGRKLADRLAWPFRDTDRVAERLSGQSVAALFQRGEAYFRDW ETRACRVCGGETHTVIACGGGTVLRPENMQCWSHRSVIIWIRRPLALLATAGQVETRPLL QGNKETVYSLYAQRRGLYEQYAQATVRNDGEEETALQQLTACVKNRL >gi|290781863|gb|ADGP01000009.1| GENE 51 43124 - 43945 695 273 aa, chain - ## HITS:1 COG:CAC0897_2 KEGG:ns NR:ns ## COG: CAC0897_2 COG0169 # Protein_GI_number: 15894184 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Clostridium acetobutylicum # 3 269 7 270 273 195 41.0 1e-49 MRFGLIGGTLEHSWSPVIHEQLFSLAGAADLHTYTAVPLGAEAADTALCRLERAGFVGLN VTIPYKTAVMPYIPHIAPAARHIGAVNTIYFTPQGRYGYNTDYGGFGRALTAAHWETARK NCTVLGTGGAARAVVQYLRDHGADVTVLSRYPEKQRAFAAFCKRCGATLTDYSSSRGGDM LINCTPVGMFPRTEEMPAVPQLDGYAAVADLIYNPYETRLLRQARIQGSRTLNGMYMLIA QATEAEEIWQQRTFPPAWTERIAAFMEKKYGGR >gi|290781863|gb|ADGP01000009.1| GENE 52 43908 - 44765 648 285 aa, chain - ## HITS:1 COG:DR1147 KEGG:ns NR:ns ## COG: DR1147 COG0077 # Protein_GI_number: 15806167 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Deinococcus radiodurans # 8 270 27 290 293 149 36.0 5e-36 MEKLACFGGPGSYSHLAALQQDDISSAAIVFYDTFAAVIEAVARKEACAGMVPVENSSTG SITAVYDALQESGCRIGGEIYIPIHHCLLALPGVEMDELQSIYSHAQGLAQCGKFMRAHP RWQGIAYGSTGRSAAKVRRDGIRSQGAIGNRQAAIRYGLRILATDIQDNTTNYTRFLRIC RPPSDLRDGNKMTLVLTAPHVPGSLYHILEVFYAAGLNLTHLESRPIYGRPFEYRFYADV VGRMPPDIVKRLEKTCEYVQSLGQYEENTGGEIHAIRSHRGNVGT >gi|290781863|gb|ADGP01000009.1| GENE 53 44768 - 45862 932 364 aa, chain - ## HITS:1 COG:CAC0896 KEGG:ns NR:ns ## COG: CAC0896 COG0082 # Protein_GI_number: 15894183 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Clostridium acetobutylicum # 4 354 5 355 356 378 50.0 1e-105 MNTFGQHIHITLFGESHGAAVGAVLDGLPPGEAVDWEAVKREMARRAPGQSALTTARREA DAFQIESGYFEGHTTGTPLCVRIQNTDTHSQDYAGWRQRIRPGHADYTAQVRYRGCQDYR GGGHFSGRLTAPLVFAGAIAKQILAGQGIRIAAHIQQIGDIRDDSFRPVGEEPAVLKKLS SAAFPLLHEDRRTAMEACILQAKQEGDSVGGMVELMAQGIPAGWGDPFFGSVESVLAALF YAVPAVKGVTFGSGAAFAAMRGSQANDAWYYEAGRLRTRTNHNGGINGGITNGMPLLCRV TVKPTPSIARVQETVDIEAQTACTIQVPGRHDPCIVPRAVPVLEAVLAWGLLDLYLGSDT YRGA >gi|290781863|gb|ADGP01000009.1| GENE 54 45864 - 47144 999 426 aa, chain - ## HITS:1 COG:CAC0895 KEGG:ns NR:ns ## COG: CAC0895 COG0128 # Protein_GI_number: 15894182 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Clostridium acetobutylicum # 12 424 13 423 428 375 45.0 1e-104 MQMELTANTWDGAIRVPSSKSMGHRHLICAALSRGTSTVQGVSPSQDIEATLRILQALGV RIHTDTDGTHCTYTVTGGMRSFADTVLCDAGESGSTLRFLLPLAVWSGNTTRFIGRGRLP ERPLQPYYSIFQAQHIAFHRENGSLPLTVHGVFHPGTYVLPGNMSSQFFSGLLFMLPLLR GNSELRSTTPIESAGYLALTLDCLAAHGIEVQRQAEDGYFIRGEQSYRAGSYAVEGDYSQ AAFWLAAGTLQGRVVCKGLQPRSRQGDKAIISLLQAMGANLHVVGDTVRAETSSLHGIAA DVADCPDLVPVLAALATQAQGVTYLYHAARVRLKECDRLHAMTVELQKLGAHIEETPDSL RIVGKTSLRGGRVYAWRDHRIAMALAVLAASCEAPLQLEGAEAVQKSYPQFWQDFQTLGG SCRQEA >gi|290781863|gb|ADGP01000009.1| GENE 55 47152 - 48213 1370 353 aa, chain - ## HITS:1 COG:CAC0894 KEGG:ns NR:ns ## COG: CAC0894 COG0337 # Protein_GI_number: 15894181 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Clostridium acetobutylicum # 1 351 1 353 356 316 47.0 5e-86 MKEINVPLEKETYSIRIERGLLDRCGALVSNVTAARHIAVISDAQVDALYGQRLENTLTA AGIHVVRLVFPQGEKSKCVDRLVQLYEQLAAAEITRDDCIITLGGGVSGDLGGFAAATFL RGIPFIQIPTTVIAQVDSSVGGKVAIDLRSGKNLVGSFYQPSAVWIDPDLLQTLPQAFIR DGMGEVIKYGYIRDIRLVERLEAWNETTLSSHWEEIIAACCTIKAAVVAADTRDTGERQI LNFGHTIGHAVEGFYGFGTYTHGQGVAIGMSRLTARTEAAGMTEAGVTKRLRRLLQRYGL PIDVPASAEELLPFIKHDKKRRGQMITLVVVPRPGTCRLVPIALSEAAQYIGK >gi|290781863|gb|ADGP01000009.1| GENE 56 48200 - 49078 864 292 aa, chain - ## HITS:1 COG:CAC0893 KEGG:ns NR:ns ## COG: CAC0893 COG0287 # Protein_GI_number: 15894180 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Clostridium acetobutylicum # 1 284 1 282 286 178 34.0 1e-44 MEQGSSEFNRHRIFGIIGMGLMGGSYAKRLRQIGVQEIIGVDISAQVCVQAEKDGCVDRA STDPRILRRAEVVIFCLPAAAMVSFLRQYGAVFRAHALLTDITGIKEPLVPAVRQYVRAD LDFILAHPMAGREGSGYAASRADIFDGANYIIVRREENTAAHLRDIGHLARALGCAHIVT VTPAVHDRYIAYTSNLPHILAVALVNSAGLHRRAAYFTAGSFRDASRVADINAPLWTRLL LANKENVLHEISSFQASLQGLTQALRDGDEDALLTLLEKAGQRRREWLHERN >gi|290781863|gb|ADGP01000009.1| GENE 57 49088 - 50107 1186 339 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 339 1 337 337 390 56.0 1e-108 MIIVIKEGTEAEKMEALQEELRTQGVEVDVSRGKRKTLLGLIGNTSRINQSHVKSLDFVE QVIRIDEPYTRASRAFHPEDTVVTLANGTQIGGKKLTVMAGPCSVETPKQMTTLAAHMRK TGAAVMRGGAFKPRTSPYSFQGLKETGLEMLCRAARKEKLPVVTEIMSADKLDVFLQQEV DIIQIGARNMQNFELLRAVGKTRKPILLKRGLSATIEEWLMAAEYIMAGGNSNVILCERG IRTYETYTRNTLDLSAVLAVKRQSHLPIIVDPSHATGKRWMVPALAKAAIVAGADGIMVE VHNNPSEALCDGEESITPDMFDELMQSLRQLAPICGREL >gi|290781863|gb|ADGP01000009.1| GENE 58 50450 - 51379 941 309 aa, chain - ## HITS:1 COG:CAC3017 KEGG:ns NR:ns ## COG: CAC3017 COG0726 # Protein_GI_number: 15896269 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 107 302 91 282 282 144 42.0 2e-34 MLQKHIRNTVLGTVLAVVLVCTGTWAHYWEKQAVRQSRPEVGVEAAKEATEAAVPVTPAA TVLLPDSFRLPAPDTDLPVYDRYTIRQRKDKGLPVTYGTKRAYYYGKKVAYLTFDDGPDK KNTREILSILKQEKIHGTFFLVGLNVRLPPGIVKDIYVSGNAIGLHSYTHNYKILYSSPQ AYLQEMMMTETLIHQIIGVRPIITRAPGGTAGHFTKAYWQAIRENGYIEVGWNSLTGDAD GTGKTAAKAVQNVIRQIQGQPHIQSHLVILMHDSSGHGETVKALPPIIHYLKSKGYTFRV ITPSVPPAW >gi|290781863|gb|ADGP01000009.1| GENE 59 51382 - 52167 724 261 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0287 NR:ns ## KEGG: Vpar_0287 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 7 252 8 249 252 207 41.0 3e-52 MFADNRWLRMLHPGITAIVGAGGKTTVLERLGTFGHAGNYPLMVSSTVPVERTRVDTVEP FDVICTEDIARGEQFCAERIAAGHVPAWFSAADDRGRYAGLSPELIDGIKRRHPAWYILL EGDCARDKWLKAPLSDDVPLPLSCDTVIGVVNLQMLGNTLSADKVAGIETAAAIMGRPVG AVITPAMLAKLLKHPRGLFRGMPCRKILFCTGYNAVQHRMTAALLDDLEDLGLAASVLAD GYRTTCTIRQYVCYDFTRERE >gi|290781863|gb|ADGP01000009.1| GENE 60 52194 - 52946 970 250 aa, chain - ## HITS:1 COG:no KEGG:Despr_2752 NR:ns ## KEGG: Despr_2752 # Name: not_defined # Def: molybdopterin dehydrogenase FAD-binding protein # Organism: D.propionicus # Pathway: not_defined # 40 243 56 257 265 87 32.0 6e-16 MKNRQQRKKSDSLGPVYKDMLTITPTAFGDTAGGSARNYIIDTGDEVAIGADTHFETLET DGQIKKIAGSMITFFLREMKEQYGGLPGTVGELVEAKAARSVLLPMLVSLKVDVVLHHKG RMCLRDYISCPPLGERVQEIRIVKEKVFASYAAVRQEQTRIPYVTAAIAVREEGWRVVIG ARPGVAVVAAGAGTELTEKGIDVRENAAHLAAEETEFGDDALCTAAERRQMTAAIVRVLI KQAWQGYNKL >gi|290781863|gb|ADGP01000009.1| GENE 61 52972 - 53664 713 230 aa, chain - ## HITS:1 COG:no KEGG:BBR47_09720 NR:ns ## KEGG: BBR47_09720 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 26 221 2 207 210 73 27.0 8e-12 MYSDMEERIKRRLALSKPVSFIRQRQYADTITEYFQACFPQRRTEVLTGGEQHGSSISVQ VLYPLPQEPFYVVHTVRLMAATASAPACELWLLLPSTWPFQQAGLIHLQEPAAWPLRLLG KLGEQVRAHRISLANGVSVPYCQAPGGAAGERAPAGVIMAQISGDLAAVKEKNHIVAELF MPVLVYKEEWELMKDMGTDALLESVIACNQGSFQLQLHRPNVADMEFILQ >gi|290781863|gb|ADGP01000009.1| GENE 62 53785 - 54159 564 124 aa, chain - ## HITS:1 COG:SMc01274 KEGG:ns NR:ns ## COG: SMc01274 COG0239 # Protein_GI_number: 15965143 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Sinorhizobium meliloti # 6 116 7 119 125 63 40.0 1e-10 MKSTAVAIGGAIGAVLRYSIGVLTAGSGTFPYGTVTVNLAGSFGIALAYCFFQSHSSAPH TWRLFVITGVLGGFTTFSAFSWEWLQIWKQAGWVGGTAYGLLQGAGAFLCCMGGLAAGQW LWGR >gi|290781863|gb|ADGP01000009.1| GENE 63 54375 - 54596 116 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968019|ref|ZP_06559568.1| ## NR: gi|290968019|ref|ZP_06559568.1| hypothetical protein HMPREF0889_0565 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0565 [Megasphaera genomosp. type_1 str. 28L] # 1 73 1 73 73 107 100.0 2e-22 MKTRCLTLTSFETDLFRHYMNREKDAPVPLRLCSIIYRHVHEQEVHTAAPATPYARVAAV PAVAPLHPHKQII >gi|290781863|gb|ADGP01000009.1| GENE 64 54656 - 55540 1204 294 aa, chain - ## HITS:1 COG:DR0377 KEGG:ns NR:ns ## COG: DR0377 COG1760 # Protein_GI_number: 15805405 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Deinococcus radiodurans # 41 289 54 302 319 214 51.0 1e-55 MCRYEYNSLQELLDLAEQHAVSLAEVILRHEMERGECSERDVRQQMAGRIAVFQESVQAG LQNTEKSVSGLVGGDAARLQKKSHVLLGALANTASVYAMAIAEANAKMFKIVACPTAGSC GIVPAVLLAIGEARQAGEKELTEAMLTAAGVGAVVSHKATVAGAVGGCQAECGSAAAMAA AVAAQLCGASNRQILQAFALCMKNTLGLACDPVAGLVEVPCVKRNACYAVLALTAAEMAL AGIESVIPPDEVIEAMGEIGRLMPVALKETSEGGLAQTPTGKAIAARLEQAMAQ >gi|290781863|gb|ADGP01000009.1| GENE 65 55551 - 56210 999 219 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 4 219 7 223 227 199 46.0 3e-51 MGIFDVVGPIMIGPSSSHTAGAARIGLMARNILKDEPVKVQLTVYGSFAKTYKGHGTDKA LVAGLLGFSADDVRLRDSFAIAARQGLQVELQRSTAETAHPNTVRIAMQGKQGRTMEVVG VSLGGGKIEIREINGAQVSLRGEEHTLITVHRDLPGIIAQATTILAIGHINVSNMRVFRS GKNAAAVMIVCTDSPVPADMVAMIRKIEAIESVVTLLPL >gi|290781863|gb|ADGP01000009.1| GENE 66 56232 - 59885 3261 1217 aa, chain - ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 3 1209 11 1224 1232 723 38.0 0 MAWTEAQEAAMNSRGQTLLLSAAAGSGKTAVLVERLVRRLLDRQNPIDMTAVLVVTFTKA AAAEMRERIGAALTAALEATGRPDAERQLALLPAASISTLHSFCQEVIRTYFYTIDLDPA FRVAGEEELSLLRKQVLEDLLLSYYEQEEKADVLYPLADMFGTERGDDNIVRTVERMYQY SRSMPFPEQWLRQAAAAYDIPSSGSIEETPWWEPVKAEIRRSLQEAVRQYEWAVRQIEAR PALQGVKDLIYSEYRSLQGVLEKHTWEMTARAVKAVTFTRLPALRKLTPEDKACWEACKK IRTDSKKLIQDKLCPVYFAVSSADLLDGMRAVLPVMKGLVQVTSDFAAAYEKAKREKGWI DFSDLEHLCLKILSAPESTPDRIVPSAVARKLQEKYAEVLIDEYQDTNGVQELITQLVSR TNNRFMVGDIKQSIYRFRLADPSLFLEKYKRFRREPQAVERCIDLNRNFRSMPQILAAVN EVFAAIMTEEAAGLAYGEREFLHAGRGPSDHPHTVSGRTEVCLLSTGEKEKETTEATEAT AQEQTAFEQESAYIAEKIQHLLASHTYITEKDGTHTPLSYGHIVILLRSPAGKAEVLVQA LQQAGIPSFAEQNGGYFAAIEVQIMLSLLQCIDNPQQDIPLAAVLRSPLVGVSEACLAEL RLLGAGPLWRNAARYITQGENSSAVTALQQFLQQLESWRTYSRRHSVAELIWRLFSDTAY YEYVGGLPGGSIRQANLKALYERARQYEEHGFRGLFRYLRLLDKMKEDGVDLAPAKVAGE KEDVVRIMSIHKSKGLEFPVVIVADMGKAFNRQDWNEPILFHHTLGIGLKQYDTDWRMSY PTLAWNGIRAQSAWESTAEEERILYVAMTRAKELLLLIGHTSHLANDWNRWCQGVPPERA KSYWDWVMPTVLKNCSTAPALTTAIETATDGVWQNDIWQVRVQCSLPAVRSSRCKGERDP RLAALQEGNPTGTEPPAWLEERLQWRYAYPQAVTAAAKLSVSEIKRQQQEWEQAALQAER GLSRLLPEMATEEDPFAQPPLWEVTDENKMTGAAYGTAMHKAMQYIAGNTHAGLDEIRAD LVQWEKEGIFSAAERAAIKVAQIRAFWLQPLGKRMAASPVVHREYPFSVLLQGNPYLPTL EAGEAVLVQGVLDVLFQEGEEWVILDYKTDRLSTPEAFRERYHVQLAIYKQAVEQVTGRK VKEVYIYSFHLQQAVAC >gi|290781863|gb|ADGP01000009.1| GENE 67 59872 - 63246 2787 1124 aa, chain - ## HITS:1 COG:BS_addB KEGG:ns NR:ns ## COG: BS_addB COG3857 # Protein_GI_number: 16078126 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Bacillus subtilis # 1 1121 1 1164 1166 578 31.0 1e-164 MAVKLILGRSNSGKTERCLRALAACQRAGRAALFLVPDQATYTMERRLAERMPGKGYTGI QVVGFSRLAYLVLQERGCKRAAVSELGRMLVLQRLLRQMESELTVLRKAAVQPHFSETVG TFIEECRSFCVSPAALQAVATTVSDPSLADKLQDIARVYEAYTRVLTARFGNADDLLTAL AAEIKYAGFLQHIPVLVDGFQWFTPQQLQVLEQLEKYAGSLTVTLSLDGENLASQAGETA LFHRSYETYGALRRLFPHSEQICLPPRLTNGAARMAHAFFRPVPAVRSRATAGIHIWECT SKEAEIEGVAKKIIQLCRQGYRYKDFLLVVRTSEEYNQLAERIFSMYRIPLFSDYQRPMA SHPIVETVVSLLQVFRTSWTYEALFQLLKSDLFPISRDDADALENYCLAYGIQGGQWLAD KAWYDDGTDARTASGINRIRRQVRDLLLPCWQESRSSHTLQTWCTLLYTWLKRLQVPATL RRWRQEDADAGCPGEAKEHEQVWKELLAFLQEIVTLCGEEEMGLEDFAVILEDGLKTLKF SLIPPTLDHVTLTSVERGYTLQGKTVFICGMNDGIFPKRNREEGLFHDGERQQLEKAGLY LAPGSRFRSLQEKYLFYLAVTRSLQEVYLTYALADESGAAREPSLWIRQLLERGYVDGVR TVSDGISPGEEAAAITSAEAAVRLLPGQLQPAVDGGEVAPVWWALYDQLLRTSQKQAVRQ AVRGLFHTNVAAPLTASVVRRLFAPQGILHGSVTKFEQYGTCPFAFFARYGLQLEARQRY RFVAPDLGLLVHGALKYMGDALLREGKQWRDLEMRQIPEYCRQATEVTAPSVRQDILMSN AYFRHIKERLIQTLIRTVRRLREFSEVSNFQMKGLEIAFGGKNGVWEPLQFTLPSGGKVS ISGQIDRLDMLQEGEISYVAVIDYKSGRKEPALQPVFLGLDLQLLTYMIVALRQLGEKAV PAAVLYCYVRDDKISADHMVTETEKMALFQKKSKMSGFFLDDGRTMRQLDTSMQAYSEFL NLRLKKDGSLSNAGNQMYTESGWSHMLAVVQRRLRQAAQKITEGDIAVRPVLWQHRMPCT YCLYHAVCRFDTAFGNTYRVCRTIGNEDLRDKIRVEGEGEDGMD >gi|290781863|gb|ADGP01000009.1| GENE 68 63414 - 64457 1293 347 aa, chain - ## HITS:1 COG:MA4144 KEGG:ns NR:ns ## COG: MA4144 COG1397 # Protein_GI_number: 20092937 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Methanosarcina acetivorans str.C2A # 6 325 10 291 314 100 31.0 4e-21 MEGTERFDGCLLGGATGDALGYFLEKLDLKMIHKRYGSHGLRTVLALPNHGNKSVVSDDT QLTIFTADGLLWAAHEGLAFDQGLYRSYMRWYYTQTERVVEPEQEAWMRRQAHETAWGYD LMGDKSLFARRYPRKNSLVTLAAGEFFADRPAPNDCNGSGVLRSAPVGLYFSADPEKAFA VGCRSGELTHGNPAAYLTAGTLSAVIAVLTGGGALREALADAFRFLQQRPQGIPVLKVLV RAVDEAVTDRNPVHSLQKLGLGWRADEALAIAVYCVLKNDSLREAVIMACNHDGDSDTCG AVCGNIAGALYGCRAVPNHWQKNLECLGVLKTISAALYAAANREKTA >gi|290781863|gb|ADGP01000009.1| GENE 69 64483 - 65427 1036 314 aa, chain - ## HITS:1 COG:YPO2505 KEGG:ns NR:ns ## COG: YPO2505 COG3965 # Protein_GI_number: 16122726 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Yersinia pestis # 10 304 18 312 312 161 32.0 2e-39 MTQQIWRHGETRLLFLSALMMGVVAVGGLWMGIQSHSQAILLDGIFSVAAMIIKLLMMLT ALLTRRKTGKRFPFGYWQCEPAVMLLEGIFTFFIVLYALVAGMWGLWHGGREVEFGTAVY YAAFFTLADWSFYGYVRRANKKVHSYLVHYDNVSWLIDAVLATGLLIGFGGARALQFTPY ANLQVYVDPVIMMALGIQMIFPTVQILGPAIRQILGMAPVALHEHVQAVMDGFTVRYGFS DYVSGVQVFGRAEFIEIDILVAPDYPLQQVTELDFIRNEIAAALGSGDHEKRVTITFTTM KKWLARKYDTEERA >gi|290781863|gb|ADGP01000009.1| GENE 70 65790 - 66677 785 295 aa, chain + ## HITS:1 COG:VC0480 KEGG:ns NR:ns ## COG: VC0480 COG0668 # Protein_GI_number: 15640507 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Vibrio cholerae # 25 286 15 283 287 194 37.0 2e-49 MTVYPNSTAAVTSHVGRQVSSGLLSFEQVSHFLLAHGPNVVYAIIIFIIGRYIAKFCKKL ISQMMRHADYDHTVNTFVSQIIYYGLLALVILSAVNKLGIPTNSFIAVFGAFGLAVGLAM QNNLANFASGILLLIFKPFKAGDWVSLPATEGTIKGIQLMNTVLITKDNKTVFIPNSQIT SSQVTNSSYMEERYIPLLLDISYDNDHHQVIRLLKEVFRNDARILNADTAEIGIREFADN AVRIAAYPRVKNSHFIAVRYDLLSAIKDAFDAHHIVIPYPQRVVYMKAEATAEKK >gi|290781863|gb|ADGP01000009.1| GENE 71 66737 - 68074 1394 445 aa, chain - ## HITS:1 COG:AF1145 KEGG:ns NR:ns ## COG: AF1145 COG0427 # Protein_GI_number: 11498745 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Archaeoglobus fulgidus # 1 438 7 462 482 246 34.0 6e-65 MKVYEEYKKKLCTPQEAVQAVKSGDWIDYSQGCSFPTALDCALAARRDELRDVKIRNAIS CRPVQVVEQDKERQAFTYNLWHCSGLDRQYLDQGRAFHAPMAFRNCGSYYSRGLAPVNAA MITVAPMDARGNFSYGLTNCCQQEVLDAAEVIILEVNPHMPVVYGMENDHIHISEVTHVV EYDGPLCTAPGRAATESDRQIAAHIFPYLYDGMNLQLGIGGIPNALGELIAASDLQDVGM HTELMSDGYLQLYKAGKITNKRKRLQRHKGVFSICLGSAELYEFLHYNQDILSAPMSYVN NPEVIRQLDNFVSINGCIAVDLYGQVSSESAGIRQISGTGGQLDFITGAYMAAEGKAFLA MRSMHADKHGVKHSHIVPRFTAGDIITTPRTQAPYLVTEYGVAQLAGLTTWQRAEALIAI AHPEFREMLIQAAAAQGIWRQSNKR >gi|290781863|gb|ADGP01000009.1| GENE 72 68079 - 68696 862 205 aa, chain - ## HITS:1 COG:CAC2000 KEGG:ns NR:ns ## COG: CAC2000 COG1014 # Protein_GI_number: 15895270 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Clostridium acetobutylicum # 6 188 5 188 192 158 42.0 5e-39 MTAVTSVVLAGVGGQGTILAGKILTSGLMAAGYDVKMAEVHGMSQRGGSVSSQVRFGDAV ASPIIGEGMADILVAFEEMEAARYAKFLKPDGIAVVNMHRIPSMPVLSGACTYPEGGVAA LQQKIRVVRLEAAKIAARAGHVKSANMVLLGALIEVLGLLQIDWQASIAQTVKKEYAAVN IQAFEKGRQAAGKTTPPGEIRHISG >gi|290781863|gb|ADGP01000009.1| GENE 73 68697 - 70478 1881 593 aa, chain - ## HITS:1 COG:CAC2001 KEGG:ns NR:ns ## COG: CAC2001 COG4231 # Protein_GI_number: 15895271 # Func_class: C Energy production and conversion # Function: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits # Organism: Clostridium acetobutylicum # 1 586 1 573 584 564 48.0 1e-160 MKRLMSGNEAIARGLYEAGVTFASAYPGTPSTEILEQAATYEEMYAEWAPNEKVAAEAAI GASIAGVRAFAAMKMVGLNVAADPLYTFSYLGINGGFVFVSADDPGMHSSQNEQDNRQYA KAMKIAMFEPSDSQECLAMVKEAYAVSETYGVPVMLRLTTRICHSESAVQTAARTEFTPV PYVKAREKMDAVPAISKVRRYVVEEREEKLRRYAETSPFNVTEMHDTRIGIVAAGAAYMY AKEALGERASYLKLGFTYPLPLEKIRAFAAQVDTLYVVEELEPFMEEMIRAAGIPCRGKE VIPNIDELNPNIVGNGILQKAAVGIQLDDGFTVPRPPTLCAGCPHRGFFYELGKRKDTVM VGDIGCYALGGAAPLSAKDLAVCMGSAFSVSHGLCHGFAQSGQQKRVVGVMGDSTFFHTG INSLMEVVYNRSSAICVILDNRITGMTGHQDHPGTGYTLKGEATTPIAIETVVRALGIPR VRSVNPLQLQEMKEALDWAFAVTDAPSVIITKWPCVLKKFTPEETRQYKVRRVPCRVDRD TCIGCKTCLRTGCPALRYETDSRKAHISQADCVGCTVCLQVCPVQAIAAEEGA >gi|290781863|gb|ADGP01000009.1| GENE 74 70680 - 72545 1505 621 aa, chain + ## HITS:1 COG:CAC0459 KEGG:ns NR:ns ## COG: CAC0459 COG3829 # Protein_GI_number: 15893750 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Clostridium acetobutylicum # 174 618 164 627 627 276 38.0 9e-74 MKEICFLIADTYLKDTILHTLTAYYPEWPKGTLPKIEIIDFPRLVPQAKELLQTGTKVII TNSGAHQILQEHIKSIPLLCLYSSTPDVLYTLSALEAYRKIHLLLNKNFMFRLENCPPRL REKLQLYPPYKAEAPYEHLLSLIRKIPPAPATALVGCTLLPQIAPRLPFPTFPIYPGESV ILSALNYARELLNFQRHTQRQLSIVTSILSHVEEGIILHNAEGRISHLNKKTEQFFQLSQ MPQHIRQISPDLHRTTAGKETLITRPPYTLVATADTFKINKETHTIITLRDITELQRLEK NIRYKLTRTGLTATHTFAHIHTVDPEMKRLIALAQKFAAYNEPLLIQGDSGTGKELFAQS IHNAGPRRHGPFVVVNCAALPPELLESELFGYVGGAFTGARKEGKIGYFELAHTGTIFLD EINSMSPAIQSKLLRVLENKQIMRIGSDYVIPLDIRIISAANTDILQAVRENRFRRDLFF RLHTLTLNLPSLNERPADILYLFSLFTEKIAGRPETIPPALQQVLQQHCWWGNIRELYSV ALRYHILAPQTPDRYDELFDTPHTVTAPPAPALGTINLKQLHRDMDNLIIQELLRQGFSK TRIAQLLQISRQTLFNKERNQ >gi|290781863|gb|ADGP01000009.1| GENE 75 72623 - 77359 4882 1578 aa, chain - ## HITS:1 COG:ZcirA KEGG:ns NR:ns ## COG: ZcirA COG4771 # Protein_GI_number: 15802711 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli O157:H7 EDL933 # 14 282 14 279 659 80 27.0 2e-14 MNEKRMRISRTAALSGAIFAWLTISGGAVGATAAVTTGNVHVRANAVQENAKNDSQSISV ITKADINEIRAKSAEDVVFRQTGVLRTVDAMGNVGVSIRGAEPRHTLIVVDGQPVMGYLS KYRGAGDALLRMGAENIDHMEIVRGASSAKYGADAIGGVIDVHTKQPSSKAGAELGMEFR YRKDFRGTSLPMNYYFRGDTGRVGKLKVAVTASKRDIDPINSQDRVYTKGVNWYNDFQPS LRYYGEIKNAGIQGEYAVNNRQKLSFQIMTEREHLERRNKSVDPRAALGSFLEPMQIFKR VRQGDTNRIMWEGRNGRTDWRLQTSYGKVKEQDITLLTYYDKGSDAYGGCNDLGGVDWLK QNRWAVDVTANTALNDRHILSYGLGYSRETGEGSRLKRAPHTRVETIDPWDYDKSLWVAD NTAMKDDKPHSHVHNYALKETANGFIWDKNREYYGTSELPPITYEEAKTMALSLLMGAPA SPDLAARYAKFKTILEKENSPALIGKDMYHSAMSPLVYFGTLKEFPGMVPPDFPQDLRYK GKLYGEEFKERQNQLLIGKASINKKYAYLQDTWQISDRLRVSPILRLDHSNLFGNHVTFN LGGVYTVGNNRRLKMNVGTGYAEPGLAELYYSWQMFGGAGEAHPGWYWLGNPQLQPEKSF NIDVSLEGENKNTYARIGIFHNHIRDYLAPYFTGQYIDFDFIAAADRRPISIDRIYRFRN IGSADITGVEAEVRRQFTPAWSIKAGYTYLHAVNNSESDLPKRLTDRPVHKVDLSVTYNN RKKGIRATVWSDYYIRMLDSNSGYVQDPYKKDKNGNYIKQQAKYKEKTFGLWHMLVEKQI NKDTAVYLGIDNLFNHHDDERAYQERSYRLGMHMKLADIAAPFTDGAQSWGQWSGEPQPF ISRYAFASSAPRHLSLWGEYDVRSESFTGENKANMRLTKETAATADAARNNADASFHGSR QRLRLGLAYALTKHVEVKAVGRMGAEDTSREAGSRGLTPARLETAEVNIKHPAWDYTIGR IHEKMGVTGYWFNKEYDGVRLVYTDAAHGWQTRLGYGDFSRTTGHVDSAYNHKEHGVIHR APTINELFGVYAADDGIHSVPMIYPMKYDPNGKYNYREKFNHAGEIQNEKGEWIRDPKLS DVEIARRKLQVAQEWLQIVKKVDYPDADTLRQKAKSEGKMYRSAYDEIIDKMTQRKELDI YYGDAQVRLPDGTIEDWYAHEENREKKRNEKDAWWVQRYGNAVVRDAVRKEVLKVPDRNF SPEERLEEKNIRLMMSDYYDRIVAHYKNEKQTGFQFINARTGKVLTREQQIDKFFAGFVG NHMFVYDDTSPGHAEPNVGDFVSSVFYNMLGDMYDPNHGTPVPLYGAPKSITQEGYLLMQ DKIPAMERAGYIQLKKQVTPTVGLEVWHVRSLGDKKAIHGTDMKVANVVAAGIQAKVGKY AQLSAEYGVNFSSLGKYFHGGHTYGVPTDTGTAPAFGVVRLDIGRADTERRGSWQAYLDY KAFAHGAFFGGTGADVPDRYLDGIRSFTFGFSYVPRKKMLLQGFYTFGAKGLQKRDTLYT PENFSLGDYVRLQATYRF >gi|290781863|gb|ADGP01000009.1| GENE 76 77645 - 78958 1858 437 aa, chain - ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 16 435 19 441 443 375 48.0 1e-104 MAIAERIWEERKFREQSGLSNEAWRQATRFSGIDLGWIIMCVGMSLGAGIIFLPVQVGLS GVLIFLLVALVGYPIAYEHQKLYLNVLAEAPQCEDFAGVISGYLGKNWGFFLGVLYFIFT TILIFLYSTALTNDSASFLVTFGVTKTVLSTNILYSLAIISFLVLLASQGEKALMKISSA MVFTKALVIAALGVIMIPFWQAANVLIPPDALYVVKHFIILLPFIAMSIEFFVGLGPVTI YYRGREENKAVAHYRSLRVYKTAYLFLVGLVVFYTVSFNFAMSHEQALQAYTANISALAL AAADMDGSLFKILNLVLNIFAVVTAYFAMFLGFRDACRGIVLNVLKRFIDETRLPKKLLT YSISVFCILLCWGITVCNIPILRFTPVLGGLIGIIACFLPAWLVWKLPFFSAYKNWKLIP IVFMGIILVISPFIASL >gi|290781863|gb|ADGP01000009.1| GENE 77 78861 - 79052 67 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLKRVACRHASLLKPDCSLNFRSSQILSAIAILHPPIFSELLRGFTAVYFSIVQKIYAF EKF >gi|290781863|gb|ADGP01000009.1| GENE 78 79127 - 80314 1428 395 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 405 407 554 68 1e-157 MAKEHYERTKPHVNIGTIGHVDHGKTTLTAAITKVLSKKGYAKFEDYADIDKAPEERERG ITINTAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLARQVGVPAIVVYLNKADQVDDPELIELVEMEVRELLSSYDFPGDDVPIIVGSALKALE GDAEAEKSILDLMDAVDSYIPTPDRPTDKPFLMPVEDVFTITGRGTVATGRVERGTVKVG DTVEIVGLADKPRETVVTGVEMFRKLLDLAEAGDNIGALLRGVDRKEIERGQVLAKPGSI HPHTKFKAQVYVLTKDEGGRHTPFFNGYRPQFYFRTTDVTGVIQLPEGTEMCMPGDNVKM DVELITPIAIEVGLRFAIREGGRTVGAGVVSEIEA >gi|290781863|gb|ADGP01000009.1| GENE 79 81254 - 84688 3468 1144 aa, chain + ## HITS:1 COG:BS_pycA KEGG:ns NR:ns ## COG: BS_pycA COG1038 # Protein_GI_number: 16078550 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Bacillus subtilis # 2 1142 4 1145 1148 1452 60.0 0 MKKIRSVLVANRGEIAIRVFRACNEMGIRTVAVYSQEDSLSLHRFRADESYLVGAGKKPV DAYLDIEDIIRIAHEHDVDAIHPGYGFLSENADLAKRCEEEGIIFIGPRVEHLIMFGDKI NARIQAKKAGIQFIPGSDGPVMNYEEVKRFAKEVGFPIMLKAVNGGGGRGMRMVNNMADL QEAYDRAKSEAKLAFGNDEIYLEKCIVNPKHIEVQIMGDEHGNVIHLHERDCSIQRRHQK VVEVAPAFSLPPALRARICDAAITLMKNVHYVNAGTVEFLVTPDENFYFIEVNPRVQVEH TITEMITGIDVVQTQILVAEGYALNSKEIGIPSQESVRCLGNAIQCRITTEDPMNNFMPD SGKIMVYRSGGGFGIRLDSGNAYTGAIITPYYDSLLVKTVAYSLTHAGAVKKMLRVLKEF RIRGVKTNIGFLINVLRTPSFVDGSYDVNFIDDHPELFNLPVVQDRGTKLLKYIGETTIN GYNGKGHVDKPSFAPLQLPTVPEGEFPAGTKQQFDRLGAEKFCRWIKEQDTVFLMDTTMR DAHQSLMATRIRSIDMLRVLEASSKKLPQLFSYECWGGATFDVAYRFLQEDPWERLREMR KKAPNILLQMLIRGANGVGYTGYADNVVRHFVQLAAKNGIDVFRIFDCLNSLDNMYETIQ AVRDTGKIAEVALCYTGDILDPARAKYDLAYYVKMAKEAEKAGAHIIAIKDMAGLLKPEA SYRLITALKEALSVPVHLHTHDGAGNAVGTLCRAVDAGVDIIDATYSALAGGTSQPSMST VYYALAGNKRRLPLDVHAMEEMSRYWATVRPYYKGVDRAKAYPDTSVYQHEMPGGQYSNL QQQAQSLGLGDRWHEIETMYHTVSMMFGDIIKVTPSSKVVGDMALFMVQNNLTEQDVYDK GDILDFPQSVVEFFQGYLGVPYGGFPERLQKIILKGKKPLCERPGKTLPPVDFESVRKKL ADAGYKHEDEDISAFCQYDKVFRDYNEKLKVYGDVSVLDTPTFFFGMKKNEELHVEIEKG KDLIITLINISDPDDSGIRTITFLFNGVEREIQVPDKSIDLHTVTKRKADPEVPGDIGAT LSGSVVNILVTKGQKVKKGDPLLVTEAMKMETTITAPIDGTIGEIYAAKGQAIISGDCLL EIVD >gi|290781863|gb|ADGP01000009.1| GENE 80 84818 - 85654 1000 278 aa, chain + ## HITS:1 COG:slr1870 KEGG:ns NR:ns ## COG: slr1870 COG1432 # Protein_GI_number: 16330259 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 4 251 5 235 249 150 36.0 3e-36 MDHEMKLAVVIDAENISSKYIEVILSEANNLGDVIYKRIYGNWTTPQMASWRTTILDNAI QPVQQYSNTIRKNSSDSALIIDTMDLLYQSNLDGFCIVSSDSDFTRLASRLRESQKYVLG MGESKTPRSFISACNKFLYLDILVEEAEEETATGDTPTDTDSVAAKSPEVRRTDTTPGKD FIIIKQAVIKLADENSDDTGWIFSGTLGNLLSKQFSDFDVRNFGFKKFVPFIESLGIFEV NTITDDKNKTVKHNYFKLKIQHRPPSQGSHYHHKHTRT >gi|290781863|gb|ADGP01000009.1| GENE 81 85730 - 85927 274 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968038|ref|ZP_06559587.1| ## NR: gi|290968038|ref|ZP_06559587.1| putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein [Megasphaera genomosp. type_1 str. 28L] putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 85 100.0 1e-15 MDETLRKQAAAIFQRLGLAEDEAITLFYKRTVAAGKLPFAAAGERKKDIRKKKRMNERFA EWDAR >gi|290781863|gb|ADGP01000009.1| GENE 82 86047 - 87060 1061 337 aa, chain + ## HITS:1 COG:CAC3553 KEGG:ns NR:ns ## COG: CAC3553 COG1609 # Protein_GI_number: 15896789 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 334 1 335 335 226 34.0 4e-59 MSTIKDIAREAGVSIATVSIVLNGKGGARKISAETQARIHAIAQKLHYVPNQSAKKLRAA GQGHYAIAFYWATDFRIHYLARITLGIQQEIMRQHNVVHLAVVPYEADHLQEQMESLQNE FFNSIIIANTSDKDMDYLQHCRLTYPVVLFNRESPYYSSVTMDNYKLGCRVARHFLRKKV YNAAILTHNADLPIMSQWTHGFLNTFCQNGHPLAADHILRCSPHAGDAVALIRRLHAAQA LPRAIFCESDLLAHGVLYACHNLQIAIPQQLEVFTMGINSPAVNDYAVPSLSRIDIPMGE IGAACLRLAVDLLEKRRPNPTVLYVDGTKIIRQSSPE >gi|290781863|gb|ADGP01000009.1| GENE 83 87163 - 88455 1799 430 aa, chain - ## HITS:1 COG:BH0625 KEGG:ns NR:ns ## COG: BH0625 COG0015 # Protein_GI_number: 15613188 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Bacillus halodurans # 1 430 1 430 433 483 57.0 1e-136 MIERYTEEEMGRIWTEQNEWNTLKEVEILASEAQAELGNIPAEAAAEIRAKAAFSVDRIH EIEAETHHDIAAFVSNVAENIGDAGKYVHLGLTSTDVKDTALGVMLKQASDVLLRDLEAL RQVLRRRATEFKYTPCIGRTHGIHAEATTFGLKLCNWLAEVERDIDRMQHAKETIAVGKI SGAVGTYADVDPFVEDYVCRHLGIAPALISSQTLQRDRHAEFLTALAVIASSIDKFATEI RHLQRTEVREAEEYFSPKQKGSSIMPHKRNPITCERMCGLARVIRGNAQAALEDVALWHE RDISHSSVERVILPDSTIALDYMLKTFTRVIDKLLVYPEKMLADLNLTGGLIYSPILLNT LVAKGAVREQAYRWVQRNAMKRWLEGEDFLENLKRDEDIAKIMTPAEIEACFDVHKMLRH VDTIFARFGL >gi|290781863|gb|ADGP01000009.1| GENE 84 88614 - 89696 290 360 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167854911|ref|ZP_02477687.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis 29755] # 202 344 1 143 151 116 41 7e-25 MDVENKKSYVIIGGLIIGIIAALLSMAGNPANMGFDITGFIRDTVGALGLHQDTGAQYIR PELVGLVWGALILALARGQHKAVGGSSPLVRFVIGFFVTVGALVFMGDPFRMVLRIAGGD WNAIIGLIGFIVGVAVGVYCLKKGFSLKPATVAAKLDSAFAPIVKIVLLILVCAAPAFIV FSDGDGVGAHHAAIIASLIGGLLVGAIAQQTKLCMVGTFRDLFMDRKTTMLCGWIAVLVA AFVVNLLTHQFQGGVDMQPFAHTDGVWNFLGMGLVGWGCTLLGGDPLRQLVLSGEGNTDA AVTVIGMAFGAAISENFALASTVSGPTMNGKVAVIIGLIVVLIISGYYICGKGCSQEQQE >gi|290781863|gb|ADGP01000009.1| GENE 85 90037 - 91434 1716 465 aa, chain - ## HITS:1 COG:CAC3595 KEGG:ns NR:ns ## COG: CAC3595 COG2509 # Protein_GI_number: 15896829 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 8 456 2 450 457 406 46.0 1e-113 MNRKAVQTYDVIIIGAGPAGIFTALELADKGLRILIVEKGQDIAERLATAHNPGARKEDK MRNVVSGWGGAGAFSDGKLTLTTEYGGNLDEYMSKRELMDKIQYVDRVYCRFGGQDRKVY GEENEAAIRQLQRQATAAELRLIPARIRHLGTDVNAEILTAMRAYLEGKAHIAANTAVEH IVVKEGTAAGVMIGDQWYAAPYVVAAPGREGSEWFVGEAEKLGLKFTSNAVDIGVRVEMP AEVLEPITDIVYESKLIYFSKFFDDRVRTFCMNPYGFVVEENNDGLLTVNGHSYAHKKSE NTNFAILVSKKFTEPFHEPIKYGKFIADLANILGGGVMVQRLGDLLDGRRSTVERIQRGL VRPTLTKAVPGDLSLVLPYRHLQDIKEMLEALDKVAPGANSRHTLLYGAEVKFYSSRLAL SPQLETAIPNFFAIGDGAGITRGLVQASVAGVTVGQEILKRAQHA >gi|290781863|gb|ADGP01000009.1| GENE 86 91575 - 92006 395 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968043|ref|ZP_06559592.1| ## NR: gi|290968043|ref|ZP_06559592.1| hypothetical protein HMPREF0889_0594 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0594 [Megasphaera genomosp. type_1 str. 28L] # 1 143 1 143 143 219 100.0 6e-56 MYHVKPADRMTDADEKHLQGKLFLLSLVLTLFLLYSFYRAPFPYACPATGILLCALSGLT YYRRRRFFRHRERGQRTCCAALSTYLGAGLTLACMHVYALRQPLTENDALIFLGAFFFAL YMLYRGLGTLIIKGNTAPPLRRN >gi|290781863|gb|ADGP01000009.1| GENE 87 92396 - 93349 491 317 aa, chain - ## HITS:1 COG:PM1540 KEGG:ns NR:ns ## COG: PM1540 COG4823 # Protein_GI_number: 15603405 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 1 299 5 296 309 89 24.0 9e-18 MKEYKMFNQQLGILRKRGLIVPKDGRPKRFLEQENYYNVINGYKDLFLQKDASGNLSDPE HYLPNTHFNELKALFLFDRELRILFLKYILIFENSFKTVLSHEFSKKYPKPNSYLDIKNY VEDNPKKVLQQIAILTKTIHDKVDKNGAVKHYIEEHGSVPLWVLVNYLTIGNLAHLYNIL VDTDKNTIAKYYADKYKRQYNTTSMPRFSSEYLGAALKIINLVRNKCAHDERLYNSDFGN VRVVNIAEYYGCTKYDNKRIIVAIFYLKVLLDKKYFQKFSAALKKIFAQYQNEFNTVAFS DVLRMMGIDLVELQKLM >gi|290781863|gb|ADGP01000009.1| GENE 88 93673 - 93939 149 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKCFLFEAGCFGGKYDTAPWCSGSTCRPVTAKIVGSNPIGVAIFAQVAQSVEQGTENPR VGGSIPSLSTNYVYRRSWRNGRRATLRG >gi|290781863|gb|ADGP01000009.1| GENE 89 94087 - 96735 3001 882 aa, chain + ## HITS:1 COG:L85514 KEGG:ns NR:ns ## COG: L85514 COG0474 # Protein_GI_number: 15673239 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 10 882 28 910 910 640 39.0 0 MAQDSHDAPDFAAMSGDAVLQHLQVTLDGLRPEEVRRRRTQDGENTFSQAPADTLCYRIR CAFINPFCIILAIVAFISYVTDSYTNGFSAGGKVEAGIIVIMIVIGGLLRFSQEIKAKHA GDQLRALLPTTVTVRRQGKCCHIAHTELVVGDIVLLTAGQTIPADIRLLQTADLFVSEAA LTGESRIIEKTAAPAAPAAGRTAPDMAYMSTTVLSGTGLGAVIAVGNRTRYGKAARVSRP FKDSFQKGTRSISYVMLRFIFIFIPLIFILRGLPDHHWSSALAFSLAVAVGLIPEMLPMV LTACLAKGSISLSHKKTIVKNLNTLQGLGSLQVLCLDKTGTLTRENIVLEYFMDILGKES HKVLDLAYINSFYHTGIRNPIDTAILSCAAMPRRTDYYRTLTEYYHKLAEIPFDYTRKIA TVLVGAPKKQPILIAKGNLKDIYKRCTAVTYENKTLPIRNGSFADVYTIVQDMLEDGMKV IAVAVKTFPKGTTVIRPQDEKDLTLLGYIAFFDAPKPSARISLEELKALHITPKLLTGDA EEIAKSVCRRVGIPAQHIVSGADLQDLDAAAFDATVRKNTVFAELSPEQKVQIVQSINRQ PAMTGFMGDGINDMPALLAAHVGISVDTAVPATKDSADLVLLDKDLQILATAIREGRKTF TNMLKYLKITAGSNLGNIISVVMAGLCLPFLPMTSLQLLLLNLFYDALCIVLPWDTVDEE DIAYPKDWSGKHLGKFMLLFGSISAVFDGITFAFLYYMFIPLVLHCPVFSAALPPVLQEQ YIRLFQTGWFLESLWTQIVILYFLRTSKMPFIESRPSWQVMSVTLAGLFVFTGLLFTVGM PVVGLVTMPAPYFVFLPGICAAYILCVGAGKYIYIRKYKKLL >gi|290781863|gb|ADGP01000009.1| GENE 90 96748 - 97254 509 168 aa, chain + ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 70 163 135 228 233 105 51.0 5e-23 MKKHISIIRLDPELETGLIAHLQHAHPDSPAARTLAADLQELLRGTLQSVVLDGTPAGAA DASGPPPPALRLGALTISATSHTVTLQDRPVNLTPKEFDILYFLARNRGQVFTKEEIYTA VWGHAYVYDDSNIMAFIRKLRKKIEVQPDSPQYILTVWGIGYKFNDRF >gi|290781863|gb|ADGP01000009.1| GENE 91 97350 - 100097 2694 915 aa, chain + ## HITS:1 COG:L85514 KEGG:ns NR:ns ## COG: L85514 COG0474 # Protein_GI_number: 15673239 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 1 915 1 910 910 982 54.0 0 MKKIFSTRTTAPKAVYAAKSALDFAAVHPVSDTLQRYETTPEGLPETFVAARRLKYGSNK IEHGKSKTRWELLRNAFINPFTVILICLALISAVTDIIFPMFSLFGNTPADTNPVTVLII VIMVVISGILRYVQESRSDNAVGKLLDMISATCTVLRPQQPRREIPMDTVVVGDILHLST GDMVPADCRIVTGKDFFVSEAALTGESDTVEKVAAVNPFQERMTAYTNIAFMGSNVVSGQ ATALVIGTGSRTLFGALAANLTQAPVETNFTKGVNGVTRVLIRFMLLMTPVVFVLNGLTK GDWLQSLLFGISIAVGLTPEMLPMIVTAALAKGALSMSKEKTIVKNLNAIQNLGAIDILC TDKTGTLTQNKVALEYHLNVSGREDPRVLHYAYLNSYFQTGYKNLMDIAIIEKAAEEIDA STLQERTTHYEKVDEIPFDFKRRRLSVVVRDRHGRRQMITKGAVDEMTAICTTVETPQGI RPLSDKEIAAITAVTADLNKKGFRVLALAKKSDPPQAGICTAEDEREMTLLGYLAFLDPP KESAARAVAALQDYGIETKILTGDNEYVSRTVCRQVGLDCTSLLCGDEIAAMTDDDLAAA AARTQVFARLTPDQKVRVLTALRTAGHTVGFLGDGINDAGAMKAADVGISVDTAVDIAKE SAHIILLEKDLTVLVKGIIAGRKTYANMIKYIKITASSNFGNMFSVLVSAALLPFLPMMS LHLLLLNLIYDLSCTALPWDNVDAEYLRRPRPWDASSVSRFMLWLGPTSSIFDITTYLVM YFIICPLCTSHGILYNELPQHFSGAALAAHQAAYAGMFQAGWFIESMWTQTLVIHMLRTA KLPFIHSHASFRLSFLTACGILGLTLIPYTHMGQAIGFLPLPAGFFAYLIPCVALYMGLT TGIKKIYLHRYGQLL >gi|290781863|gb|ADGP01000009.1| GENE 92 100284 - 102143 1647 619 aa, chain + ## HITS:1 COG:STM4118 KEGG:ns NR:ns ## COG: STM4118 COG2194 # Protein_GI_number: 16767383 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 96 615 16 564 577 145 26.0 3e-34 MSMLHTPQTEGNPSFFTRMFPKGGKKRTIACLILLYVILYAVIYRWQWSVSYGLGMDNVQ DVTLGLIPAVLSVVLALGIYWRNLSVNAIIPPAVVALGWIITGPYLNYTTLLTHNVIYIN NIYDMYVGLYLFSIFLCINMALIRYIPRVLSALIMTVLHLAAFFIIIVQWVYALLYHSCI TTTGALLIFQTGPRETKEYFGSLGPYRIAALILVFLILIIGAYILNYRQKKGARSPLYTP FIPLLSLFIIFPSVGALAEEIIPNAFPIKTFMDSKEYLEHAKLYATTHDSRYAKLQAVQL HPRQGPNTIILVIGESETRTYMNVYNPSQPNNTPWLTAMKADPHFTFFNNAYACVWYTVP VLEHALTEANFYNNKEFNQSISIIDMARKAGYKTYWFSNQGSVGVSDTPISLVAHTADVH EWVDRDAKYSTLDESLLKFLKKVNPKDKNFVVLHLMGSHVEYRNRYPASFQKFNDGTINR VADFNNTILYNDWFLHQVYNYGKQHLNLDAMLYFSDHGSDPTRLRQPDIAPFTVLRIPMF CYLSDNYLQRNADVARTIKDHQHKYFTNDLAYEFVCGVLNMQSPHYDPSMSIASPTWKMA RKDLVTRFGKSSLMEDVGY >gi|290781863|gb|ADGP01000009.1| GENE 93 102220 - 103011 443 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 234 1 241 263 175 40 1e-42 MNRIERAFADGKAFIAYVTAGDPTLAATGEFIVAMAEAGADIIEIGIPFSDPVAEGPVIQ EANIRALQGHTTVPKVLELVREVRQQTQVPLVLLTYLNPVFNYGITDFFKACRQAGVDGI IIPDMPFEERRDCAAAAAQYGIAIISMIAPTSASRCAAISAVGEGFLYIVSSLGVTGVRS RITTDLAGEIQEIRKYTRVPCAVGFGIGTPEQAARIATYADGVIVGSAIVKLIARYGARA TPHLTAFVREMKAAVTAGNGSGI >gi|290781863|gb|ADGP01000009.1| GENE 94 103004 - 104188 1618 394 aa, chain - ## HITS:1 COG:CAC3158 KEGG:ns NR:ns ## COG: CAC3158 COG0133 # Protein_GI_number: 15896406 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Clostridium acetobutylicum # 4 386 3 385 394 504 62.0 1e-142 MSKGRFGEFGGQYIPETLMNEIHRLETAYDACKHDASFQRELTDLLDNYANRPSLLYYAE RMTKELGGAKIYFKREDLNHTGAHKINNALGQCLLAKKMGKTRVIAETGAGQHGVATATA AAFLGLQCEIFMGEEDTIRQALNVYRMELLGAEVHAVTSGTRVLKDAVNEAMREWVNRVD DTHYVIGSTMGPHPFPVMVRDFQAVISREARRQVLEKEGKLPAAVLACVGGGSNAMGMFY HFIPDTSVRLIGCEAAGKGIDTKLQAATVATGRPGIFHGMKSLFCQDEQGQIAEVYSISA GLDYPGIGPEHAYLYTSGRASYVPVTDAQAVAAFSYIAKTEGIICAVESAHAVYEVMQLA PTLPKEECIICCLSGRGDKDVAAIARYEGRDIHE >gi|290781863|gb|ADGP01000009.1| GENE 95 104190 - 104789 497 199 aa, chain - ## HITS:1 COG:CAC3159 KEGG:ns NR:ns ## COG: CAC3159 COG0135 # Protein_GI_number: 15896407 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Clostridium acetobutylicum # 1 197 1 203 205 138 37.0 6e-33 MSKIKICGLTRPEDIRAVNRWQPDYIGLVFAGRKRRVTPAQARTLRAALHPAITAVGVFV NAPIELIRQLWREGTIQWVQLHGQEDEAYIRALRACVRAPIIQAFSLQSRADVQRLQASS ADLVLADHGGGGSGRRFDWSWTAYIQRPYILAGGITCQTIQEALRLRPYAVDISSGAETG GHKEEKKIQALVQCVRRRP >gi|290781863|gb|ADGP01000009.1| GENE 96 104786 - 105568 809 260 aa, chain - ## HITS:1 COG:CAC3160 KEGG:ns NR:ns ## COG: CAC3160 COG0134 # Protein_GI_number: 15896408 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Clostridium acetobutylicum # 1 248 1 246 262 206 47.0 4e-53 MILETIVTAVQARLREDKQRVSPARMMARAEAVPAPADFPFYRALCGPAPAFICEVKKAS PSKGIISPDFPYVATARAYEEAGAAAVSVLTERDYFLGDPQYAKEIAAATRLPVLRKDFI VDAYQLYEARAIGAAAVLLIAAILSDPALTYFLQLAHTLGLSVLTECHTAGEIQRAVRAG ARIIGINNRNLRDFTVDLNRTRQLCRYVPDSCILVSESGIRTGDDVATLRACGVQAVLIG ETCMRSRDKKALLQQLRGQG >gi|290781863|gb|ADGP01000009.1| GENE 97 105565 - 106119 510 184 aa, chain - ## HITS:1 COG:MJ0234 KEGG:ns NR:ns ## COG: MJ0234 COG0547 # Protein_GI_number: 15668409 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Methanococcus jannaschii # 1 178 158 335 336 163 47.0 2e-40 MKYVGPVRRELGIPTVFNILGPLTNPAHAELQVLGVYDEALVEPLAQVLHALGVVRGMVV HGTDGLDEISPSAPTKICEFAGSQFHTYTLRPEEVHVPCGKKEELKGGSPEKNAAMLRAV LAGEPGTCRTAVLLNAGAALYVAQKAPTIEDGVRLAARLIDEGKALQTLQRVIQAGRDLR EATR >gi|290781863|gb|ADGP01000009.1| GENE 98 106116 - 106589 497 157 aa, chain - ## HITS:1 COG:aq_196 KEGG:ns NR:ns ## COG: aq_196 COG0547 # Protein_GI_number: 15605759 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Aquifex aeolicus # 1 148 3 152 340 117 41.0 1e-26 MITEMTNKLVRRQALTGEETAQVMYEMMAGNTSAVQTAGFLTALQTKGATVTEITACARV MREHAVPVAAPAGLLEIVGTGGDHSGSFNISTTAALVCAAAGCRVAKHGNRSATSSCGAA DVLEALGADLYLSPAQSMAVLEETGFCFSLPNNIIRP >gi|290781863|gb|ADGP01000009.1| GENE 99 106602 - 107168 461 188 aa, chain - ## HITS:1 COG:BH0091 KEGG:ns NR:ns ## COG: BH0091 COG0512 # Protein_GI_number: 15612654 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Bacillus halodurans # 1 186 1 185 198 197 50.0 7e-51 MILLIDNYDSFSYNVYQLAASFGKEVKVLRNDAVSVAEALALQPSHIIISPGPGRPAAAG ICEELIRKTRGTVPILGICLGHQAICEVCGGTITYAKRMMHGKRSTVRRLRNHALFKDIQ DPFDVGRYHSLAADKAALPSCLEVLGESEDGEIMAVAHKTLPLMGVQFHPESILTPQGPI LMRNFLNI >gi|290781863|gb|ADGP01000009.1| GENE 100 107149 - 108630 1717 493 aa, chain - ## HITS:1 COG:aq_582 KEGG:ns NR:ns ## COG: aq_582 COG0147 # Protein_GI_number: 15606032 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Aquifex aeolicus # 2 483 5 489 494 349 40.0 7e-96 MLSFEEVAEYGSRYTVVPLSRRMLADGCTPVEVLRRLRHESDRCYILESMEGKDRRGRYT FLGYDPSLEIRGKKGRIEKIDKQGRVTVLQDTPHAVLQQVTALYRAPVFPDLPPFTGGLV GYFSFNYLRYTEPVLAERPPEEEGLDDFDLHLFEKVIVFDHVKQEIVLISNVRLADGRAG YAAAEAALAAMARLITDGKPAAVPPLQLTTPLQPLFSEAAYVRMVTAAKRYIREGDIFQV VLANRWEATAAGSLFDTYRLLRSFNPSPYMFYFSVGDTEIAGSSPETLVRIGGGRVTTYP LAGTRPRGATAAADKRLEEELLHNEKELAEHNMLVDLGRNDIGRVSRPGSVHVASYLQVL RFSHVMHLGSTVVGTLAPGVQPVQVMEAVLPAGTLSGAPKIRAYQIIDELEQADRGLYGG AIGYLDFTGNMDVCIAIRLAYKHGRRLIIRAGAGIVADSDPQREYEECCHKAEAVRTAVE RADGGIRYDSFNR >gi|290781863|gb|ADGP01000009.1| GENE 101 109794 - 110102 61 102 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSYILSYRYRMMLYIFILTLTITIILTIILILFLLLSFLTSVTVTRYSITKMLPLCARIR AVRAERGAAFLPCGGRATTFFCGSAYRNGVRGGRMSLRRLFF >gi|290781863|gb|ADGP01000009.1| GENE 102 110327 - 111571 1326 414 aa, chain + ## HITS:1 COG:no KEGG:LM5578_2512 NR:ns ## KEGG: LM5578_2512 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_08-5578 # Pathway: not_defined # 1 132 1 135 327 82 33.0 4e-14 MQHLQWVKVPVGYMDDPRMVYLTAQKNGTFLFTFWFYLRDLAAKINDGGRIGVTPRLPIA ISTFAARFHKKPAVIEQALHVLLQLELLQRTADGLLYVTMWEDMQGGGSRREATRARVAR WRQRQREARNAACPEEDEGTAAVEMTATAVAHADSDVMSATTETTATDVVPADSDVMSAA TETTATDVAPADSDVMPAATDTTATAVAPADSDVMPATEATATAVAPADSDVMPAATDTT SSAEFDPVPDVMPATEATATDLFGSAPAEGTPATAAPDAAAAAATGDDVTEERIIIDEDG YEVILLPPKPKRTLPQVPTGADGRPVYGDLVRSLRTESPARDTLTVYTQAFGSPNDADRR ELARLGDRYGDATLQTAIGRAQRYGIGNLRYIAKIAANMRGLSYGPTGTQSKCL >gi|290781863|gb|ADGP01000009.1| GENE 103 111681 - 111878 305 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968058|ref|ZP_06559607.1| ## NR: gi|290968058|ref|ZP_06559607.1| hypothetical protein HMPREF0889_0620 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0620 [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 91 100.0 2e-17 MHTQQVNAKMKVIMNRDGKSRTFTMSKLRNGAEAANVYTAAKAVSALQKGDLAAVHMVVD TKIEA >gi|290781863|gb|ADGP01000009.1| GENE 104 111911 - 112150 430 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968059|ref|ZP_06559608.1| ## NR: gi|290968059|ref|ZP_06559608.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 79 1 79 79 132 100.0 1e-29 MEEKTVTTLALSFVTEQGKIARYSLREPKDGLSRADVDAGVNALLAADVFAIGEDRFRAL KDAAVVQRSVRKLTTPDAH >gi|290781863|gb|ADGP01000009.1| GENE 105 112219 - 112938 308 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 8 202 15 210 236 123 37 6e-27 MITTEESIIRLCIALVLGAVIGYERQAQNKSAGLRTHTLVCIGSCLCMIVSVNVAMSYYF GYGYHNSDPERIAAQVVSGVGFLGAGTILANQKARNVQGLTTAATIWVVAAVGLVTGAGY LAVAIVATVLIFLVLTVFIRVDTLLTERCRKYYILQVAMKNTVGQSRRMTAFFAEEKINV ESFQALSGEEGPLAEFTVRISYIGRLQESDIIGKLLALKGVSKAEIVPEETKESAAGPQ >gi|290781863|gb|ADGP01000009.1| GENE 106 113105 - 115249 2232 714 aa, chain + ## HITS:1 COG:lin1535 KEGG:ns NR:ns ## COG: lin1535 COG0586 # Protein_GI_number: 16800603 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Listeria innocua # 2 189 11 198 208 145 42.0 2e-34 MDTLLHLMESYGYVSLFVAMAAENANIPVPSEVILGFAGFLISQHVFTFWTAFFIACAGG IAGSVISYGLGLYGGRPLLLKYGKYIFFNEKKFALAERLFAKYGGIAVVVGRCLPGIRTF ISFPAGVARYPFGKFVFFSVIGTIPWTLLLVWAGSLLGSHWHNLVQYNHLFVLIVVLLCL AAGVIFLIKRGLPPAWSRFLYAHRYSLSLAVFSAVIFFSFLGAFPLTDPDEPVYGETARE MLAAKDWLSPRIFGMFWYDKPPLFYWLEMLSYRLFGISDLTSRLPGACMAFATVLYVYYR GKKIFNPAIAYTSAMILASSLGFWYIGHAAITDTALVFTLTVALLGFYEKQYYRAYIFCG LAVLAKGPIGYAFPALIVLLYLLAMRRLRQLREMKLFSGILLALLVGLPWYVLMYHTHGD AFLQTFIGYHNITRFAAPEHPGRNSVFFFIPVLAVGLLPWSAGLIPALVQLRKRAGVYRD ALYFCVLWAAFIFIFFSLSKTQLVTYIAPMFPPCALLLGWFFRDRFDAGKRSLSTILSAL LPGLLLLGANAFPLHGADVVFRPALHVIATLLGSTLLLAALLWLRPARAKAAFALTVCGM LALALAVNGLLMPPLATTLTSAPLARYVRPPAQPGTEIYIEKFLHPGVTFYSGVYGKEWK TPADLPLSAIQRQPQRVYIVLRKTTWRTLCRTRNEAARFRIVQETATQLIVTNH >gi|290781863|gb|ADGP01000009.1| GENE 107 115261 - 116865 1207 534 aa, chain + ## HITS:1 COG:all2870 KEGG:ns NR:ns ## COG: all2870 COG1807 # Protein_GI_number: 17230362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Nostoc sp. PCC 7120 # 23 311 46 395 641 122 26.0 2e-27 MHTRIKLLLLGLVCFLFFIIGNASLPVTDPVEANYALTAKEMLRHGDWLSPQIYGLYWYD KPIFIYWLLYLSYSLFGITDFAARLPGAFFGAATVVLGAWYLHRQSGRWRPALLLAALLS TSLECWFISHSIITDQPLFFFMCGTLLCAYIALTEGRKGYMTGAYVLAAGAVLTKGPVGL VLPGIFLLVFCLCQRNRVYLRRLFTWQGILLFLLLGGAWYVPMYLVHGQDFINGFLLFNN VTRATVSEHPEYNVWYYYFLLVPLSLLPWSGPCFYGWWRERGRRDAPVYATVWIVGTVLF YTAMATKYPTYSYLADMPLLLFGARALDRLMDRGREKAWFCLTVPTAVFWLALAIAAQTY HPRTFALPSLHTFTVFLVIMTVLLGIGQAKKAFPALPYLVTAGTVVMYILLIRQVCVPFY TYRSAVTLTPCVSRIQGDLYFFHTYPTSFVYYTGHPATCLIPQNTPSSPGRRAVWNKKYV YPKETESSLLARLRRKHPVSILVPASRDDVFKRSALYPQFSHAETFGNYTLYTT >gi|290781863|gb|ADGP01000009.1| GENE 108 116878 - 117585 706 235 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1939 NR:ns ## KEGG: Acfer_1939 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 1 224 1 224 229 211 52.0 3e-53 MTLTAWLDRLQQYTGDRTFNPWRMYDPRCDIGPEAPRIRREQLASYLESRLPRASYLLIA EAAGYQGCRFSGIALTCERMLLGAHPRVRPEMILPRPGRRTSLPTSAFLTNDAQRRAGLN EPTDTYVWGAIADSGLPPYEVILWNMFPFHPYGDTPFSNRTPTGAELRAGLQFTEALLAL FPSPPVIAAIGKKAAAALATAGIPARSLRHPANGGGAVFRRQFARRLQEERDGHL >gi|290781863|gb|ADGP01000009.1| GENE 109 117757 - 122322 4372 1521 aa, chain + ## HITS:1 COG:BH1728_2 KEGG:ns NR:ns ## COG: BH1728_2 COG0069 # Protein_GI_number: 15614291 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Bacillus halodurans # 400 1191 3 801 801 873 54.0 0 MYNKLRDLPQPQGLYDPAYEHDACGIGFVAHIKGKASYDIIDDALTILENLKHRGAEGAD AQSGDGAGILVQIPHRFFRRECRVLGFSLPPAGEYGVGMIFAHRYEQFRRRQQEHFARIV HREGLSILGWRDVPVDESLIGSIAKTIRPHFLQVFIKKPDNIPAGMDFERKLYIIRKLAE KEIIPESQQAGTDFYIAGLSSRTIVYKGMLTSVQLRHFYLDLSDLDFTTAMALVHSRFST NTFPSWARAHPNRYIVHNGEINTVRGNISWLNAREGKAKSPFFPNLEKVFPVVDDTGSDS SMFDNCLEYLYMTGHSLPQAMMMMIPEPWEHNSLMTKEKQDFYRYHNFMLEPWDGPAAIG FCDGIVIGGMLDRNGLRPGRYYVTKDDRVIASSEVGVVPVDPANIVCKGRLEPGKMLLVD TQQQRIISDDEIKHQIAGEHPYAEWYNKHITPLDSLLPPRTTPDGDTVVPYDLQEQEKIF GYTQEDIHKILLPMARDGRQPMDSMGIDTALPILSEQPHLLYDYFQENFAQVTNPAIDGV REKTVMSSSIMAGNVANIMDPDEQGTAALYLKRPLLTNEEMAVIKSLQTATLRTAVISIL YPVNSGTEGLETALESLCIDALKALRKGANIIVLSDRGVNSRMTAVPALLATAALHHFLI KKAVRSDVGLILESGEPREIHHFCTLIGYGITAVNPYVALEAVKDLANHKKLGALRPVEA RENYLQAATNGILSVMSKMGISTVQSYHGAQIFSAVGISREVIDRYFTGTPSPIEGLTLT EIAEENALRHTQALQREDRLEAGDFYHYRQGGHPHILPPETISLLQKACQTNDYALYKEY ARRVNTDALFRIRDLLSFVYPAGCSIPIEEVETTEQIVSRFHSGAMSYGALSKEAHECVA AAMNRLGGMSNTGEGGEDADRFATVTNDRIKQVASARFGVTGEYLIHADELQIKCSQGAK PGEGGHLPGNKVYPAIAKTRHATTGVALISPPPHHDVYSIEDLSELIFDLKNANRQAAIS VKLTSGSGIGTIAAGVVKAKADKIIISGYDGGTGASPRTSLRHAGLPWEIGLAEVQQTLL LNKLRDRVTLGVDGKLLTGRDVAVAALLGAETYGFSTAPLLAIGCHMLRVCHRNTCPFGI CTQDERLRKNFRGKPEYIINLLKFIAQDLREIMARLGFRTLDEMIGRYDCLKQKEQTHHR KARTVNLKHLLFRPYTDSRTGHRCLVPQDHALANTLDAAKLIRMCRPALEHKKCIRARLR IKNTDRVTGTLLGSEIIRQYGQHHLPEDTIKLAFVGSAGQSFGAFIPQGLTLTLEGDAND YVGKGLCGGKIIVSPPATASFKAADNIIIGNVAFYGATSGEAYIDGCAGERFCVRNSGMT AVTEGVGNHGCEYMTGGTVLILGPTGRNFAAGMSGGVAYVYDLDPHRCNRELVHLQAVTA PEEQEELRRLLEKHVQYTRSVHGKALLKNWKTTLSHITKVIPAAYEEMLQLIAAAEKAGH TEDEAKQIAFTEKHGKPPKNK >gi|290781863|gb|ADGP01000009.1| GENE 110 122372 - 122602 294 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968066|ref|ZP_06559615.1| ## NR: gi|290968066|ref|ZP_06559615.1| hypothetical protein HMPREF0889_0628 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0628 [Megasphaera genomosp. type_1 str. 28L] # 1 76 1 76 76 122 100.0 1e-26 MKRREAIQGTAALILFLFAVLFDFSFIPQWSARLPHESWRLLWHIARIREIMGALAVLNI IGLVSLRTVRRKLQIL >gi|290781863|gb|ADGP01000009.1| GENE 111 122794 - 123687 786 297 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 8 291 8 291 301 160 33.0 3e-39 MHTHYQRGFICCAVGAITWGLNGAVSQFLFMHYPVDPAWLSAIRMICAGFLLLFLILPKK HRKIGCMLRDPTSLKKLILMTVFGLILCQYSYLSSIKYSNSGTATILQTLCVVFLSLYLA VRFRRRPKNRELLAILLAVAGVYLAATDGNPASMVLSGKGLFWGLAAAVGAVIFPTLSQG LAWQWEAPPVNAVAMIFGGLLLTFTLRLWRAFPVLDQAGWTAVAFIIIVGTVISFSFFIQ GVCDIGPLKGTLMGTLEPLIASAVSACWLHTSFHAVELLGYALILSTVFIIMVKPEE >gi|290781863|gb|ADGP01000009.1| GENE 112 123940 - 124077 154 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968067|ref|ZP_06559616.1| ## NR: gi|290968067|ref|ZP_06559616.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] putative membrane protein [Megasphaera genomosp. type_1 str. 28L] # 1 45 254 298 298 83 97.0 4e-15 MGTLEPLVASAVSACWLHTSFHAVELLGYALILSTVFIIMVKPEE >gi|290781863|gb|ADGP01000009.1| GENE 113 124202 - 125089 1126 295 aa, chain + ## HITS:1 COG:CAC2422 KEGG:ns NR:ns ## COG: CAC2422 COG1032 # Protein_GI_number: 15895688 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 8 272 5 269 290 247 46.0 2e-65 MFIDDAPGPVFRPPSEARSFILRVTIGCSHNRCTFCSMYKDSSYRIRSLAEIDGIIERGA RAMPYVRRIFLADGDALVLPTASLLHILKKCYDTFPQITRIGAYATPNDINRKTPEELQA LKDAGLDILYMGIESGDDVVLHHIRKGTTGERTIRAGRKALAAGMKLSTMILLGLGGKER TREHALHTAQVISAIQPTMLSALSLIIPYGSPLYEEVRAGTFTPLTARGFLEELACIIRD IEVTRPCIFRSNHVSNLFPVGGTLPQDKESMLLNLETFIPQADDTCPLLNDNGNF >gi|290781863|gb|ADGP01000009.1| GENE 114 125136 - 126377 1407 413 aa, chain - ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 5 406 1 407 415 296 37.0 7e-80 MATRMAAADREGKKLQDVVFSIGMAAQQAAAQYGADRVVNATVGCYAGEDGKIACLPLVE KLYRALPIRDFVAYAPPLGLDSYGRAVQEEVFADRRPDLYCETVATAGGTGALHIAVANY AERGERVLVADWRWAVYDSVCEEVGRKVRTFTLLREDGTFHQEAFAEAVHELLQTQDSLV IILNTPAHNPTGFALTYDDWRAVMDVCGEEEKKGKRLSLVVDIAYIAYSGEPHEVRRFME LFKGAGEHLLIMIAFSMSKGYTLYGQRTGALVGLSSSRAVIDEFRELGKYSARTAWSNVN RAAMTLLTNIRRDKTLTAELEAERRAFFDTIMRRAAMFTKEARATGLPMIPYTAGFFISL PHAAPMQVCRRLQARRIFALPVHGGIRLGICSIPERQLPGLAAAIQATATEDR >gi|290781863|gb|ADGP01000009.1| GENE 115 126435 - 127436 1302 333 aa, chain - ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 8 323 6 330 352 107 26.0 3e-23 MDRELAALLQQIKPTDTRAVAALRERLRRHCPQTDPKLAALAAQLGGILKDRSRTSLKKA VLIFAADHAVDGKENKTHGRQSKAAAEKIAAGCGPINQVAHRVGAGVLLLEMGLEDPVPE SPGVQDLQVMKGARFWEKGAAMTADEMLDALFSGVQLADTLAAEGYDVLGIGQLGERAFV TALVMTAVYCRTDLSPRIQDCTDAETRHLLTGIAQKRLSPAAPLDVLQQAGAPDIAAMTG FILGAAYHERCVFFDTAVTGAAVLTAQALCPATAQYVFPSEHYDEPVHHMQMQKLGQTPF LETGHLDGQGTGAALGLALADAAQQVLGRLQAE >gi|290781863|gb|ADGP01000009.1| GENE 116 127583 - 128626 1095 347 aa, chain - ## HITS:1 COG:TM0423 KEGG:ns NR:ns ## COG: TM0423 COG0371 # Protein_GI_number: 15643189 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Thermotoga maritima # 7 308 5 311 364 80 25.0 7e-15 MAISHESIYMPSFTIGTDAYDRIGEVTGFFGEQAVIIGGVTALEKVHAYLLPALAQQDIR VLEVVPYGGEATMESVASLVTNPFIQAGQMIFGVGGGRALDTAKLAADKTHKPFFAFPTT PSTGAAATAVATLYQEDGTFGGYFPVRRPAVHTFLHTPILMTAPWEHFRAGLATALSHLW AAQSQQALRNEMLTSFLQYGEQALTDFKNHTLSAAVEKAFIQIIIQAGMPTVFGRTADGE AAAREFSAQDLYHVVAGVPSIRQTTCFGEALALGLLLLTVRRRQEDVYRQLYAFYKKIGL PCSLADMAAPEVWAREIAAASREENESAAAAFQQALAELADKSKEQP >gi|290781863|gb|ADGP01000009.1| GENE 117 129025 - 130911 1935 628 aa, chain + ## HITS:1 COG:CAC1669 KEGG:ns NR:ns ## COG: CAC1669 COG1966 # Protein_GI_number: 15894946 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Clostridium acetobutylicum # 1 577 1 575 592 599 57.0 1e-171 MNGLYLVIISALVLVLGYRFYGAFIAAKVLTVNQYKVTPAFRFEDGHDYVPTNKYVVFGH HFAAIAGAGPLVGPVIAAQFGYLPGALWILIGGVLAGAVHDMVILFCSMRYDGKSIAQIA KAQLGDKVGLATSFAVLFLNILAMAGMAVVIVNALHDSPWGTFTIGMTIPIAIFVGIYLQ FIRPGKIQEATVIGVILTLLAVVAGPAVAASPVLAPLFTISAHGIGVALIIYGFIAAALP VWLLLAPRDYLSTYMKIGTIGALALGIIIVGPTIQMPATTQFIAGGGPVITGPVLPYIFI TIACGAVSGFHCMISTGTTPKMLMNERSILPVGYGAMLTESFVGMMALIAACSLVPNDYF AINSTAIKFQALGLQVVDLPQLSAMVGENVAHRPGGAVSLAVGMAHIFSRLPGLDHLMNY WYHFCIMFEALFIMTIIDAGTRVGRYLVQELIGRVWPKFGDTTWTPGSIIASALISGAWG YIVLQGNLSTIWPIFGVSNQLLAIITLSISSVVICSMGKARYIWVTAIPWAFLTVMIFWA DCLNMFNIYLPKGEYLLFSVSAIMALLVIIVSVASIRKCLYLSKTVPASYTTTKTAEAEE LKHLEALIAQDTEEGRVAKRFKELTLSH >gi|290781863|gb|ADGP01000009.1| GENE 118 131045 - 131275 345 76 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372736|ref|ZP_03856216.1| SSU ribosomal protein S18P [Veillonella parvula DSM 2008] # 1 76 1 76 76 137 85 3e-31 MKRDRSRKPRRKVCNFCVDHVDLIDYKDTAKLRRFTTERGKILPRRISGVCAKHQRKLTI AIKRARAIALLPYTAE >gi|290781863|gb|ADGP01000009.1| GENE 119 131319 - 131732 565 137 aa, chain - ## HITS:1 COG:STM4256 KEGG:ns NR:ns ## COG: STM4256 COG0629 # Protein_GI_number: 16767506 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 103 6 108 176 85 41.0 2e-17 MNSVQLLGNLARDPDVRSTKTGKTVTRFTVACSRYYTASDTGEQKEMTDFIPCVAWGTLA ESCGNNLAKGTRVFVQGRITTRSYETQDGQKRYVTEVNCDFVGSPLGRGNGGVASSPAGG DNFGAMGNSAKDTDIPF >gi|290781863|gb|ADGP01000009.1| GENE 120 131749 - 132033 299 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372738|ref|ZP_03856218.1| SSU ribosomal protein S6P [Veillonella parvula DSM 2008] # 1 91 1 91 94 119 62 7e-26 MNKYEVMFIARPLEDEAVKPIIEFVDALLKKNGAKVEKIEPWGKRHLAYPVKKQNDGYYV LVNFEAEPDIIKEIDRVMKIRDEILKQLIVKIDE >gi|290781863|gb|ADGP01000009.1| GENE 121 132150 - 135893 4507 1247 aa, chain - ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 4 954 5 958 985 1072 54.0 0 MQSIRRLYVAKKEEFADEEKRMLADLQDNLSIRGIQSLRIFQRYDVSGLSEDMFISAKNM IFSEPPVDEVYDTLPTAAGDHVLAIEYQPGQYDQRADSAMQCLQMLTMRQDGMVRTARVA VLQGTLSEADMAAIRTYCINPVEAREASSAPCQTLQMSWETPAPVPCIEGFRQFDEAQLQ ALLQDMGLAMSPEDLAFCQTYFRQDEKRDPTVTEIRVIDTYWSDHCRHTTFMTELTAVTV DESPFTAPIRKAYETYRTTREKLQRHKPESLMDMATIAVKELKAAGALKNLDESEEINAC TIIVPVEVEGKTEEWLLLFKNETHNHPTEIEPFGGAATCLGGCIRDPLSGRAYVYQAMRV TGAGDPRQPVAHTLPGKLPQRTLTTGAAKGYSSYGNQIGLATGEVKEYYHPGFVAKRMEI GAVIAAAPRKNVVRETPVPGDAVILLGGKTGRDGCGGATGSSKKHTVMSLQTCGAEVQKG NALMERKIQRLFRRGEVTRLIKRCNDFGAGGVSVAVGELTDGLDIQLDAVPKKYEGLDGT ELAISESQERMAVVVAAANVERFLAYAAEENLSATVIAEVTDTKRLRMRWRGQEVVNISR AFLDTNGVPQQRRAHITAPRSEDFFAAPPADDIKTTWLQTMQQLNTASEQGLAERFDSTI GAATVLLPFGGTYQKTPVQGMVAKLPVLQGKTSTVSIMTHGYDPDLAVWSPYHGAVYAVL LSVAKLAALGGRRQDAYLTLQEFFRSLGTDENAWGLPVSAVLGAYTAQRALQIAAIGGKD SMSGTFEQLTVPPTLVSFAVVTEHADRIISPEFKEAGHAVLLLEVPRDSSAMPDFAVFRA HCDRLYEAIGEGKVAAARAVAQGGVAAALAEMAFGNAIGLDLAEDITGDILFSSSYGSLV VETDGVTAAAWQELPYVRPLGVTAGEARIAVADDCLPLADLQRAWEQPLQSVFPLYGKTT AGDAEIPLYTRRSVQRHADFGKPKVFIPVCPGTNCEYDSAAAFERAGAVTEVMVLRNESA QALQESLTAMAARMEEAQIIMFPGGFSAGDEPDGSGKFIATLFRNPLLTEALERLLYERD GLALGICNGFQALIKLGLLPYGHVQPLTQDSPTLTYNEIGRHVSCMVRTKIVSTLSPWFS LTRAGEVYTVPVSHGEGRFVATPAVVRQLAAAGQIAAQYVDPQGKATYDSRYNPNQSVMA VESITDPSGRVLGKMAHSERFSGDDIFRNIQGNKLQPIFAGGVNYFK >gi|290781863|gb|ADGP01000009.1| GENE 122 136105 - 136701 659 198 aa, chain + ## HITS:1 COG:BS_xpt KEGG:ns NR:ns ## COG: BS_xpt COG0503 # Protein_GI_number: 16079265 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Bacillus subtilis # 1 189 1 188 194 180 50.0 2e-45 MLELENRIKKDGRVIDNRILKVDSFLNHQLDPALLTRMGQELARLYADTAIDRIVTIETS GIAVAYAVAMAMGNIPVVFARKKRSLLSIDDQYVTSVYSYTKEEEYTASISRQYLPAREN ILIIDDFLASGAAALGLIRLVQQAGSRTAGIGVVIEKTFQPGRATLEQAGYRVEALASIE SFTDNQPIFTSSHVRRKK >gi|290781863|gb|ADGP01000009.1| GENE 123 136698 - 136877 178 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968080|ref|ZP_06559629.1| ## NR: gi|290968080|ref|ZP_06559629.1| hypothetical protein HMPREF0889_0642 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0642 [Megasphaera genomosp. type_1 str. 28L] # 1 59 1 59 59 109 100.0 7e-23 MRAQFFDGFNFSTFKYSIVAIENPDSFFHIQDFSLHPAMHTEACIRGYTCIFGINEEKN >gi|290781863|gb|ADGP01000009.1| GENE 124 136880 - 137308 397 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968081|ref|ZP_06559630.1| ## NR: gi|290968081|ref|ZP_06559630.1| hypothetical protein HMPREF0889_0643 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0643 [Megasphaera genomosp. type_1 str. 28L] # 1 142 1 142 142 280 100.0 2e-74 MQTLFTNNSGMTPPCIDEISPQSFHSPAGDLRYDLHHVLPYTGSLLIANHFLHAYFMPFG FQLPHAFEKVFELTFSRGLFVQVRDRSRDAKRLRLEYAEPLSAGKKLRIRLGGMIGQSEE YGFDEELIAQYMDLSYDTKYLF >gi|290781863|gb|ADGP01000009.1| GENE 125 137369 - 138715 1822 448 aa, chain - ## HITS:1 COG:AF1145 KEGG:ns NR:ns ## COG: AF1145 COG0427 # Protein_GI_number: 11498745 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Archaeoglobus fulgidus # 10 439 12 462 482 255 37.0 1e-67 MYRISQIAGEYEKRKITAAEAAARVQDGDRISYGLGLSAPVDIDRALGARIQSLRGVEIV GSVLIKSEPYAVYTESTSNTQVRFASAHMNSMDRKMNKDGRCWFIPMLFNELPKYWDRID KLIIQVHPMDRWGNFNLGPQAADLRGLLRAAKEVIVEVNNNMPKALGYETELNIAAVDYI VEGSHSPMAELKNKAATAEDEKIADFVLPLIENGSTIQLGIGGTPYAIGNKLAQSDVKDL SAHTEMLVDSYLDLYEAGKITGNKSRDRGKIVYAFAGGTKRLYDFIDDNQIVFNAPVDYT NNIHVIAGIDKFISINGCINLDLYGQVNSESAGFQHISGTGGQLDFAQGAYASEGGKSFL CLHSTRKKADGSLESLILPTLPQGSIVSTPRSAVHYVVTEYGIALLRGRSTWERAEALIS IAHPDFREQLIGDAEKMGIWTKTSKLAL >gi|290781863|gb|ADGP01000009.1| GENE 126 138831 - 140120 1298 429 aa, chain - ## HITS:1 COG:lin2555 KEGG:ns NR:ns ## COG: lin2555 COG1508 # Protein_GI_number: 16801617 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Listeria innocua # 11 425 18 446 447 189 29.0 1e-47 MLSTHLILQQQVKLTQRQVLAMRVLALPTQNLHEFIQEKIIENPLLEMEPVSYKTGKEKE SAALWEKIPDRDLSFEEALLRELRCYQCTPAVREGVRRIVCSLDQHGFFTGDLKALGEAG HISYEDMRQALALIQECDPPGVGAASVQESLLLQIKHSEKIPPFGTEAVLREHFTDFLQG RWDTITAKTGVSMRQLRDIRLFLKPFQPYPARQYTQRAAYIRPEVEVQAGENGTFSLRFL EELPPLTFRKDLYDLYYRAGDKETRCFLAKYRQGFLLLQEALAYRRASIIRVMQYILQVQ QQFFTRGMAIKPLLQKDIAAVTGLSASTVSRVCRARYMLFQGNVYAFQEFFGRAYACCEE NEERVSDKFVMKELQTLIAGEDKLRPLSDQALCDVLGEQHITISRRTVTKFRLKLNIPNS SIRRRRYML >gi|290781863|gb|ADGP01000009.1| GENE 127 140388 - 141335 1288 315 aa, chain - ## HITS:1 COG:CAC0089 KEGG:ns NR:ns ## COG: CAC0089 COG0111 # Protein_GI_number: 15893385 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 1 314 1 316 318 259 45.0 3e-69 MNIVLLESLGIEAAVLASYAEKLQAQGHTFTSYARNDEVQAQIRAAEKADILMIANMPLR GEVIRACKNLKFIDVAFTGVDHVDLETAKACGVKVSNASGYSTVAVAELTLAMMLNLLRN IPQADAACRAGGTKNGLVGRELAGKTVGLIGTGAIGMKVAELVHAFGASVIAYNGFSHKP NTELITYMPLKELLQQADIVSLHCPVTEKSRGLIHAEVLSYMKPTAFLINEARGPVVNAV DLAEALNAGTIAGAGIDVFEVEPPLPADHPLLHSKNTIVTPHAAFATEESMLKRANIVFD NIEAFLQGRQKNCVV >gi|290781863|gb|ADGP01000009.1| GENE 128 141455 - 142009 539 184 aa, chain - ## HITS:1 COG:CAC0738 KEGG:ns NR:ns ## COG: CAC0738 COG0847 # Protein_GI_number: 15894025 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Clostridium acetobutylicum # 2 181 1 180 306 151 37.0 6e-37 MLEFTAIDFETANKYANSACSLAAVQMRGTQCIQEQYSLIKPPFMTFEPTNIAIHGITPE QVRQEKNFLQLWPLFKPCMEKKILAAHYAVFDTRVLRSTLKTYHLDVPAATYVCTVQISR KVWPQLPNHKLDTVANMLGYSFHHHHALEDAGACAYILCAAARTVGADSVEELMRILALP IHTL >gi|290781863|gb|ADGP01000009.1| GENE 129 142085 - 142810 416 241 aa, chain + ## HITS:1 COG:CAC0328 KEGG:ns NR:ns ## COG: CAC0328 COG1451 # Protein_GI_number: 15893620 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Clostridium acetobutylicum # 1 237 19 257 259 97 23.0 1e-20 MTTTTETLYISYDHRSYAVTIERKAVKNITLRLYRHGTLKLSAAPDVPMPHLQDFLLRHS RRIFAALTRLQSMPQSPAITLQDGESLRLGGLPYTLSWCTGTQNRVKKSGHTVYMYLTDR QFSTRRRLYYRLLRREGECLFADSVRRMFPKFRDYAVSFPAVKQRRMHARWGSCLMPAGI ITFNTYLAVMPPRLIDHVTVHEMCHLIHPDHSRRFYQVMTEIMPDWQERRKALSDYLPYC I >gi|290781863|gb|ADGP01000009.1| GENE 130 142863 - 143789 1028 308 aa, chain - ## HITS:1 COG:AGc3364 KEGG:ns NR:ns ## COG: AGc3364 COG0739 # Protein_GI_number: 15889135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 192 307 306 421 432 124 52.0 3e-28 MREDKGLRQAVRRFLLLYRQGETAQGTLSPRLIRLYIRVLMGSAAFIVVVLGICIYQFLA LQQARQDLELAGQQRELVTQRLDGLQKKMQTMDALSRELRQMAKGQGGDALPKIDGSRTE KNRAATIRSDTSYNELAPAAGRLEIHMNARIIEFIALKKVFAAGVGGAATAPSYSVYKDC TVPSLWPVKGPVTSPFGPRICPTAGASSFHEGVDIGVPVGTPVHAAATGNITVAAWIAGY GNLVEIAHGQGYSTRYAHNSLLLVVAGQHVQAGDIIALSGNTGRTTGPHVHYEVRIQGKP VDPMLFLP >gi|290781863|gb|ADGP01000009.1| GENE 131 143808 - 144335 679 175 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1845 NR:ns ## KEGG: Vpar_1845 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 20 162 16 157 173 147 52.0 2e-34 MFFGLNLPGVEVVMAGAACIILVLLLVCIISLHIRLNRVTRQYTFFMQDATGESVERKLR EDVAKLHQVQELLANVRSEQQVLLQVQQHCFQKIGFVKYNAFENIGNKLSFAFTVLDGKN DGFCLSSVYGRNESRIFAKEIRNGHCLYSMSMEEQASLEQALQDTGESREEPSRE >gi|290781863|gb|ADGP01000009.1| GENE 132 144377 - 145294 1038 305 aa, chain - ## HITS:1 COG:BH4057 KEGG:ns NR:ns ## COG: BH4057 COG1475 # Protein_GI_number: 15616619 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 14 294 4 284 288 189 42.0 6e-48 MSSKKTGLPNNKHGLGRGLGAFLPTRTAGASTADVQDIPLTHIQANTHQPRRVFEEDNLQ ALADSLKQYGLVQPIIVQRQENGEYSLIAGERRLRAAKLCGWKTISALVRTYEDQVSAEV ALIENLQREDLNAIEEGCAYKALMDSFGLTQAEVAEKVGKSRAQIANMIRLLQLPEEVKE MVSNGVLSMGQVRPLLQLSGRQKQLAAAQVIVSRALSARQAETYVRNLNQSKEKKETGSA DAFLESLQDRMKLHLGTKVAIHLARGKKSGKIEISFASEKEFERLMSLLTDAEEAASGSA ISFPV >gi|290781863|gb|ADGP01000009.1| GENE 133 145284 - 146111 1088 275 aa, chain - ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 18 270 1 249 253 304 60.0 1e-82 MVYYRHERKDFGNEVDGVAHVIAVTNQKGGVGKTTTAVNVSACLAESGKKTVLIDLDPQG NATSGLGIDKSGLQRSIYDSLIDAMPLGEVLQPTLVKKLTVAPATMDVAGATIELVGMDA REYILKQRIHEWEQTAAESYDYVIIDCPPSLGLLTINALTAADYVMIPVQCEFYALEGLA QLMQTVEMVRADLNRTLQLLGVVLTMYDGRTNLSIQVAEEVKKYFSSRVFKTIIPRNVRL GEAPSHGQPITVYDPRSKGTEVYKKLTKEVKKRVV >gi|290781863|gb|ADGP01000009.1| GENE 134 146238 - 146894 642 218 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1849 NR:ns ## KEGG: Vpar_1849 # Name: not_defined # Def: vitamin B12 dependent methionine synthase activation region # Organism: V.parvula # Pathway: not_defined # 1 207 1 217 255 119 31.0 1e-25 MAIYTDTLPPIEPTKVKNFLAARGQNKFTEPVIADACRQIEQVATPQGIFRQGFYDAASA HFLCDHSFKIQSRQLLPLLADAAILIAGVVTLGSAVQACIDERFLAKDFSRGIVLDAAAG VALQLYVEQFTQTLNELVRDKNYRVTLRFTPGTGDWPLQQQVFVAQAAGGEEIGIGATSG GLLTPRKSQAALFCLRADGSCSGSGCAGCALSGGCCGN >gi|290781863|gb|ADGP01000009.1| GENE 135 147064 - 148347 1568 427 aa, chain - ## HITS:1 COG:BH4028 KEGG:ns NR:ns ## COG: BH4028 COG0104 # Protein_GI_number: 15616590 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Bacillus halodurans # 1 427 1 427 428 509 54.0 1e-144 MATAMVIGTQWGDEGKGKIVDYLAQKADVVVRSQGGNNAGHTVVVNDQSFALRLLPSGIL FSHKTCIIGSGVVVNPKVLLEEIASMTSRGVKISTLEISTRAHVILPYHIRIDEEDEKLK GDNKIGTTKNGIGPCYADKVNRVGIRIGDLMDETVFRKKLKQNMELKNRLFKTYYGCEGF SYDKVLQEYLGYAEQIRPYVKDTDYSVNHYIGQGKKVLFEGAQATMLDLDHGTYPFVTGS NPTSGGACVGSGVGPGKMENIVGVVKAYTTRVGAGPFPAEQVNEAGEYLRQTGHEFGTVT GRPRRCGWLDTAVVGYAAMLNSLDYLAITRLDILDGLQTIKICTGYRYKGKLLKEYPASL EVLEHVEPVYEEMPGWRTPISACRQYEDLPAAARAYVERISALVGVPLGIVSVGPNREQT IILQDIF >gi|290781863|gb|ADGP01000009.1| GENE 136 148573 - 149679 1021 368 aa, chain + ## HITS:1 COG:MA1426 KEGG:ns NR:ns ## COG: MA1426 COG1902 # Protein_GI_number: 20090286 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Methanosarcina acetivorans str.C2A # 1 362 1 362 365 218 36.0 2e-56 MLFDKCRIGGIESTSRLVRSATFEGLADDCGYPTSEMLQAYEHLAAGGVGIIITGMIAAG TIEPRQHRQIRCDGDDCIAPLAQLTDRVHKHGGKIIAQIVEIGGAIMLPEGPGTIISPSG IPEKVGKEMQASRALTHDEIQILIQDMGKAAARAEKAGFDGIQIHGAHGYLISKFLTPFF NQRRDEYGGSLENRARFLLEILTTVRQSTGADFPLWLKLNCADFMQEGGLTFEDCQQLMP LLAAGPVNAIEVSGGNMASLPRKGPIRAIRRTKEPMYFKPYAEHLAVALKDTPIDVGVVG GFRDLHQIEDTLATTPLTFVSMSRPFLRQPDLPNLWRNGSDEPAACISCSRCYGTDAIAC IFHKTEKE >gi|290781863|gb|ADGP01000009.1| GENE 137 149764 - 150429 501 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968094|ref|ZP_06559643.1| ## NR: gi|290968094|ref|ZP_06559643.1| hypothetical protein HMPREF0889_0656 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0656 [Megasphaera genomosp. type_1 str. 28L] # 1 221 1 221 221 430 100.0 1e-119 MNILLPGVTVLVSVCILLLFVPFSYTLQGHLGHPRTLTCRATWFMKHVSRTYPRTTEKEM PPESPSAAGEALWKQLREETNAAAEKPAAPSEEADVMTTASPFPSYFRFLLDPEVLTDCL AGILRILTASQLTACTLSGCLGLPRPHQTGILAAVLYSFGARQTENLRFTYTESSCDCTL YIAGKLYPAQLLYIVLHTVLQPPVRTLLKNLWDAGKEKKHG >gi|290781863|gb|ADGP01000009.1| GENE 138 150422 - 150829 521 135 aa, chain + ## HITS:1 COG:CAC3264 KEGG:ns NR:ns ## COG: CAC3264 COG3874 # Protein_GI_number: 15896509 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 6 116 12 119 133 59 39.0 2e-09 MDNTNEQSLSSLFEKFKEMIRVETVVGEAVHIGDAILVPFVDVSFGFGSGNLNGKTEHGR HTAGGGGGAKLEPSAILVIKGDRVEMFSIKKNGYQASAFEKLIAMAPEIIEKLKKDKYIY INDDDKTSATDEDDE >gi|290781863|gb|ADGP01000009.1| GENE 139 150943 - 151371 648 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968096|ref|ZP_06559645.1| ## NR: gi|290968096|ref|ZP_06559645.1| outer membrane protein [Megasphaera genomosp. type_1 str. 28L] outer membrane protein [Megasphaera genomosp. type_1 str. 28L] # 1 142 1 142 142 197 100.0 3e-49 MKLKKQLISLAVMGVLTAGTAASAFAAGIGTVNFETLMTSHRNYQKAVVQMQGAVKQADS EFNQKAAAMKTDDQRRALAQQLNQRLNALQVQLFGPIQQDIANKVNAVRKEKGLDAIVFQ GSVIAADNAPVDETQDVLAKLK >gi|290781863|gb|ADGP01000009.1| GENE 140 151526 - 151813 420 95 aa, chain + ## HITS:1 COG:BS_yvgZ KEGG:ns NR:ns ## COG: BS_yvgZ COG1937 # Protein_GI_number: 16080405 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 5 92 9 97 101 59 41.0 1e-09 MNSPTQNTLSQEEEKRLLSRLNRIEGQVRGIKNMLSQERPYTEVLIQVNAVQAAMHSFTK EMLSHYIHTAVAPELGDAAPHITTELTDLIQKALR >gi|290781863|gb|ADGP01000009.1| GENE 141 151823 - 154594 2497 923 aa, chain + ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 8 759 78 817 818 630 46.0 1e-180 MKEEKYTITGMSCSACSAHIEKAVKKVPGIRTVAVNLLTNSMLVTYDETVADAAAIIAAV TGAGYGAALPGSAETPLPATNELQTLKHRLRVSIIFLIPLVYIAMHTMWARLFGLPVPAA VASCLDGSQNAVTFAFSQFILLLPIMYLNRNYYITGFTNLYHRAPNMDTLVGLGSMASAL FGIVAVFRIGHGLGTGNLALVQTYSTNLYFESAGMIVTLITVGKYLETKAKGKTGAAIEK LMNLSPKQATVLRDGKETTIPLSRLQVGDELIIRPGERIGADGVISQGYTGIDESSLTGE SMPVEKGPGNTVTAATLNKSGTIRVIAERVGENTTLSQIIRLVEHAGAAKAPIAKIADTI AGIFVPTVISIAIAASLLWYFLFGADPEFSFSIGISILVISCPCALGLATPVALMVGIGK GAENGILIKSGEALETARAIDTVVLDKTGTITEGHPEVTDVLPRHISAEQLVSLAVTMEA ASEHPLAEAVLTYGKQHAIMPRPVTALQPLFGKGIKVTYQNRTYYAGNETLMQELHIPIA PIKDRLQELTAAGKTPLLFASESEFLGLIAVTDKEKPTSAAAIAAFKQLGLTVIMLTGDT LRTARALQKRLAIPHVIAGVLPQDKENHIARLQSSGHKVAMIGDGINDAPALARADLGIA IGAGTDIAIESADAVLMKSDLQDAVTAIRLSRAVIKNIKENLFWAFIYNIIGIPLAAGVL YPLYGIKLNPMIGAAAMSMSSVCVVLNALRLRFFHADRMTAPHRTPPVSERPLPPETAAY AYTLHIQGMTCHHCVQHVRQALLRTEGIQSADVSLKPAAARITAARPFLTPELSAIIRTA GYTLTAMTDDRPTGETTVVTIQGMTCQHCVQRVKIALQSLSEVQSVTVDLAAHTATIIGS RAFTPDELAPVIKKAGYTLLHKK >gi|290781863|gb|ADGP01000009.1| GENE 142 154674 - 159128 5708 1484 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 674 1218 1304 1911 2712 109 28.0 4e-23 ENVKGGDISQNSTEAVNGGQLYKTNQGFDILVGENKASNKANISFGKDKKDTLEFAAGKN LTVSLDKDNKKVLYRLQDEVVLGEAKTADKDGVNGKLTIHGTTGEQMTFNGKNGELIITA PDEKGQSNEIFLKGHDGTMGVIGKDGKTGVTLQGSGSVHIQGAGSTLPLDITTTNSSVGI DGQGASTRLLMKEGNKTHALATMDDGLKFQGDDGNAVGVKLNTQVNIVGGAKIVTEGRKI TNLTENNIGVESVVDATNNKNGTLKIRLAKTLRDMESIVFSGKDNTDSMTIDGANRTIKD LTTLTFLKDGKNNFITGLSNTTWPTAAQRETAFDASKAATQGQIKDVETAINDKVKKNNA GFDVYIKEKTQENTFNIALGREQKDAFGFLAGNGLDIIRRNKEITYALQNNITLGKKDGE DGSFTVTGKTGNRITMDGKTGDLVLQGIQNATGKIPTLSLHGQTGSIRGDGKTGGAFEMD AENGVIQAVGAAGDKQVVLDGKNAAIRIQNDKNSSVTITVKDAAAGLDGKAGAARLTVTD KAGKQTVLATMSDGLKFQGDNKESTVQRALNETLTIAGGADTAKLSDKNIGVVTDAATGT MTVKLAKDIKDLTSVETKDDKGNRTVMTGVGVTVNDEKGNRTTVSAAGAVTEDKEKNTNT STATAVTLADKDGNKTVVNKDGIRIQAAGQGTVSLTKDGLNNGGKTITGVAAGVQDTDAV NVKQLKEEIDKNRTTMQGSENVAVTGSGKQGDPFTVALKDTVTLGKKDSDGKDDGKDGKI TVTGKAGNKVVIDGSAGTIEIKGANAKQAVTITTVDGKVGMDDKDGTRITVQAGGTTAAL ATMEDGLKFQGDTKDVIVKRKLNDTLHITGGEKNADKLTEKNIGVVADSDTGSMKVQLAK NLKDMESITFGDDTESMKINGNNKSISNVGTITGLTNTTLPENWDSVQPAQAVKWDSLRD DQAASQGQVKEVARKVKKVASGFDILVGEDPDEHRANVTLGGDTKDTVQFTAGNGLAATL DTQNKKITYALKNQITLGDKNEAGKLTVQEKDGSSSVIHGGTIDLTDKGKTLTIATGQGT AELGGTGKTTRLLLKDGENMAAVATMKDGLSFAGDSGDPINLQLNKQLKITGGQTDSKKL SEAPNIGVVTKDGTMTIRLSKELTGLDKVSAKTMTADTVTVGDVQIDTNGLTVKNGPAVT KNGIDAGNKPIHDLAPGMVAPNSRDAVTGAQLFRTEARVATMDNRITRTGAGAAAMAALH PLDFDPDEKWDIAAAIGRYRNAGAVALGAFYRPSESSMISVGGSFGNADPMVNVGVSLKV GRGNNITTSRVAMAKEIVTLRNENQALKNRVEMLSQKMNAVLQVVQVPARLLQPAREIFP RDVHNEWAYKYIASLAAKNYLDTMRETARKPEMSRLEMAGLIYEALKQGAPVDSNMDRAM SEFDPELRRIRDNRIRVDRVAGNGSRDRDKIERVRVNRNGNLLG Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:29:25 2011 Seq name: gi|290781862|gb|ADGP01000010.1| Megasphaera genomosp. type_1 str. 28L contig00059, whole genome shotgun sequence Length of sequence - 1833 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 170 - 1702 99.0 # AY959012 [D:1..1546] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:29:25 2011 Seq name: gi|290781860|gb|ADGP01000011.1| Megasphaera genomosp. type_1 str. 28L contig00030, whole genome shotgun sequence Length of sequence - 593 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 591 526 ## UMN179_00317 hypothetical protein Predicted protein(s) >gi|290781860|gb|ADGP01000011.1| GENE 1 3 - 591 526 196 aa, chain + ## HITS:1 COG:no KEGG:UMN179_00317 NR:ns ## KEGG: UMN179_00317 # Name: not_defined # Def: hypothetical protein # Organism: G.anatis # Pathway: not_defined # 1 168 955 1114 1336 107 52.0 3e-22 TTLNDTFAKKDASNVTDATAWAGKLGTGEVAENNANLVTGGKVYAAIKDKADKSELTNKA DTSLNNITEAGKTVIKNLAKGAVKVADGTNTTVTTEDGTDGSKTYKVNVSDADIKKAVAS DLNKKADKDAGNIGDKERTAWANKLGTGKVEANDANLVTGGTVQAALNPVKTQAETNATN ITGLTTRVGTNESDIK Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:29:30 2011 Seq name: gi|290781858|gb|ADGP01000012.1| Megasphaera genomosp. type_1 str. 28L contig00053, whole genome shotgun sequence Length of sequence - 1306 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1306 1394 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|290781858|gb|ADGP01000012.1| GENE 1 1 - 1306 1394 435 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 66 375 106 395 1588 64 26.0 3e-10 ERYQHWIDGKTYQLSDKDRGSIGVRDEADASSLAYRIALISGEHDPSMEDTEPANKKQEL SKKLAYRTAVGADFHVSGEGATAYGYGAEAVADKTLAVGYRSYAGETGAMAYGYDAKAGG DNAIAIGYHVGANTALDEDVQQAVTKALLQRVSSSSTAQTETSPMAAIDREIDQVIKEKS LWKANSKLIRTRIEDGKKVKEYGWANSTKPDPNVKVIEPNKNAIAVGKNTYALGMNSMVL GSYSLGTGKNSLNIGLMTYTEGDNATAVGMEAIAAAKDSLALGTGTYTNMENSVALGKDS RTDYKSEDLQQAGAFLPAAMKTNPVSGILSVGHTGSERRITNVAPGYADTDAVTVAQLKA VADQIKKGGAPAAVDSLADKDLTNLSAKGKTAITTIADNAVTNKLTDTFVTDKVTKGNIT SNTLTITGDGKTVGA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:29:54 2011 Seq name: gi|290781780|gb|ADGP01000013.1| Megasphaera genomosp. type_1 str. 28L contig00046, whole genome shotgun sequence Length of sequence - 73357 bp Number of predicted genes - 77, with homology - 76 Number of transcription units - 26, operones - 17 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 4230 4426 ## COG5295 Autotransporter adhesin - Prom 4354 - 4413 3.3 - Term 4745 - 4798 16.1 2 2 Op 1 12/0.000 - CDS 4818 - 5201 502 ## COG0853 Aspartate 1-decarboxylase 3 2 Op 2 . - CDS 5204 - 6058 1047 ## COG0414 Panthothenate synthetase - Prom 6250 - 6309 5.2 - Term 6365 - 6437 15.3 4 3 Tu 1 . - CDS 6449 - 8176 1866 ## COG0442 Prolyl-tRNA synthetase - Prom 8212 - 8271 8.3 5 4 Op 1 . - CDS 8364 - 9302 1108 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 6 4 Op 2 . - CDS 9399 - 10601 1342 ## COG1160 Predicted GTPases 7 4 Op 3 . - CDS 10626 - 11813 1193 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 8 4 Op 4 . - CDS 11804 - 13129 1043 ## CLJU_c23040 hypothetical protein 9 4 Op 5 . - CDS 13134 - 13889 867 ## COG1348 Nitrogenase subunit NifH (ATPase) 10 4 Op 6 4/0.000 - CDS 13926 - 14930 1327 ## COG0309 Hydrogenase maturation factor 11 4 Op 7 13/0.000 - CDS 14927 - 15982 992 ## COG0409 Hydrogenase maturation factor 12 4 Op 8 1/0.000 - CDS 15984 - 16190 425 ## COG0298 Hydrogenase maturation factor 13 4 Op 9 . - CDS 16277 - 18574 2061 ## COG0068 Hydrogenase maturation factor 14 4 Op 10 6/0.000 - CDS 18577 - 19608 1091 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 15 4 Op 11 5/0.000 - CDS 19605 - 20909 1178 ## COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains 16 4 Op 12 . - CDS 20909 - 21661 752 ## COG1348 Nitrogenase subunit NifH (ATPase) 17 4 Op 13 . - CDS 21670 - 21921 378 ## ELI_3375 hypothetical protein - Prom 22025 - 22084 3.3 - Term 21930 - 21963 5.4 18 5 Tu 1 . - CDS 22099 - 23367 1549 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 23416 - 23475 6.7 + Prom 23385 - 23444 7.1 19 6 Tu 1 . + CDS 23560 - 23763 327 ## gi|290968125|ref|ZP_06559670.1| hypothetical protein HMPREF0889_1366 - Term 23781 - 23832 15.5 20 7 Op 1 . - CDS 23853 - 24827 1058 ## COG2367 Beta-lactamase class A 21 7 Op 2 . - CDS 24878 - 26041 1115 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases - Term 26056 - 26108 8.5 22 8 Op 1 . - CDS 26119 - 27039 999 ## COG4866 Uncharacterized conserved protein 23 8 Op 2 . - CDS 27049 - 27657 467 ## COG2094 3-methyladenine DNA glycosylase 24 8 Op 3 1/0.000 - CDS 27661 - 28398 676 ## COG1414 Transcriptional regulator 25 8 Op 4 . - CDS 28420 - 29499 1007 ## COG0845 Membrane-fusion protein 26 8 Op 5 . - CDS 29519 - 29767 249 ## gi|290968132|ref|ZP_06559677.1| putative sigma-K factor processing regulatory protein BofA 27 8 Op 6 23/0.000 - CDS 29778 - 30368 811 ## COG0353 Recombinational DNA repair protein (RecF pathway) 28 8 Op 7 . - CDS 30368 - 30685 191 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 29 8 Op 8 . - CDS 30704 - 30868 147 ## gi|290968135|ref|ZP_06559680.1| hypothetical protein HMPREF0889_1376 30 8 Op 9 . - CDS 30892 - 32589 1395 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 32797 - 32856 8.3 - Term 32857 - 32909 13.0 31 9 Op 1 . - CDS 32911 - 34230 1728 ## COG0814 Amino acid permeases - Prom 34330 - 34389 12.1 32 9 Op 2 . - CDS 34446 - 35285 1132 ## COG0253 Diaminopimelate epimerase - Prom 35318 - 35377 9.7 + Prom 35320 - 35379 9.2 33 10 Tu 1 . + CDS 35413 - 36255 808 ## COG2207 AraC-type DNA-binding domain-containing proteins 34 11 Op 1 . - CDS 36321 - 37088 678 ## Selsp_0637 hypothetical protein - Prom 37124 - 37183 12.0 - Term 37175 - 37222 -0.3 35 11 Op 2 . - CDS 37234 - 39534 2234 ## COG1048 Aconitase A - Prom 39697 - 39756 10.3 + Prom 39656 - 39715 18.6 36 12 Op 1 . + CDS 39819 - 41162 1223 ## COG0372 Citrate synthase 37 12 Op 2 . + CDS 41162 - 42160 1054 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 42163 - 42216 14.2 - Term 42150 - 42202 10.2 38 13 Op 1 . - CDS 42205 - 43002 679 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis - Prom 43023 - 43082 4.9 - Term 43028 - 43073 5.4 39 13 Op 2 . - CDS 43098 - 43535 720 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 43600 - 43659 5.8 40 14 Op 1 7/0.000 - CDS 43692 - 44147 608 ## COG1253 Hemolysins and related proteins containing CBS domains 41 14 Op 2 . - CDS 44207 - 45055 900 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 45084 - 45143 6.1 - Term 45107 - 45165 11.1 42 15 Op 1 . - CDS 45166 - 47088 2333 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 43 15 Op 2 . - CDS 47157 - 47417 302 ## gi|290968149|ref|ZP_06559694.1| conserved hypothetical protein 44 15 Op 3 . - CDS 47420 - 48313 625 ## Vpar_0005 protein of unknown function DUF721 45 15 Op 4 . - CDS 48303 - 49406 1073 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 46 15 Op 5 . - CDS 49403 - 49624 183 ## gi|290968152|ref|ZP_06559697.1| S4 domain family protein 47 15 Op 6 16/0.000 - CDS 49624 - 50739 1041 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 50775 - 50834 7.2 - Term 50886 - 50927 -0.6 48 15 Op 7 . - CDS 50965 - 52458 1477 ## COG0593 ATPase involved in DNA replication initiation + Prom 52539 - 52598 4.1 49 16 Op 1 . + CDS 52713 - 52913 88 ## 50 16 Op 2 . + CDS 52955 - 53089 209 ## PROTEIN SUPPORTED gi|227371631|ref|ZP_03855114.1| LSU ribosomal protein L34P + Term 53099 - 53154 15.1 51 17 Op 1 16/0.000 + CDS 53164 - 53520 362 ## COG0594 RNase P protein component 52 17 Op 2 18/0.000 + CDS 53524 - 53733 112 ## COG0759 Uncharacterized conserved protein 53 17 Op 3 16/0.000 + CDS 53790 - 54461 735 ## COG0706 Preprotein translocase subunit YidC 54 17 Op 4 4/0.000 + CDS 54464 - 55213 984 ## COG1847 Predicted RNA-binding protein + Term 55230 - 55260 3.0 55 17 Op 5 11/0.000 + CDS 55272 - 56651 1809 ## COG0486 Predicted GTPase 56 17 Op 6 24/0.000 + CDS 56668 - 58557 1899 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 57 17 Op 7 . + CDS 58544 - 59257 792 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 59267 - 59312 10.3 + Prom 59286 - 59345 7.5 58 18 Op 1 . + CDS 59370 - 60026 736 ## COG2964 Uncharacterized protein conserved in bacteria 59 18 Op 2 . + CDS 60056 - 61351 1405 ## COG3681 Uncharacterized conserved protein + Term 61379 - 61419 2.0 + Prom 61353 - 61412 3.8 60 19 Tu 1 . + CDS 61522 - 61707 351 ## gi|290968165|ref|ZP_06559710.1| hypothetical protein HMPREF0889_1407 + Term 61715 - 61767 9.0 + Prom 61887 - 61946 7.4 61 20 Op 1 . + CDS 61975 - 62934 1113 ## COG0039 Malate/lactate dehydrogenases 62 20 Op 2 . + CDS 62962 - 63984 976 ## COG1376 Uncharacterized protein conserved in bacteria + Term 64076 - 64128 0.1 + Prom 64072 - 64131 9.1 63 21 Op 1 . + CDS 64157 - 64639 371 ## gi|290968168|ref|ZP_06559713.1| conserved domain protein + Prom 64642 - 64701 4.0 64 21 Op 2 . + CDS 64731 - 65066 564 ## Rumal_1565 hypothetical protein + Term 65071 - 65108 4.0 65 22 Tu 1 . + CDS 65129 - 65413 381 ## Vpar_1314 hypothetical protein + Term 65433 - 65479 -0.3 66 23 Op 1 12/0.000 - CDS 65410 - 66762 1457 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 67 23 Op 2 1/0.000 - CDS 66766 - 67440 725 ## COG0132 Dethiobiotin synthetase 68 23 Op 3 . - CDS 67457 - 68026 212 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 - Prom 68071 - 68130 6.1 + Prom 68095 - 68154 4.5 69 24 Tu 1 . + CDS 68184 - 68630 550 ## CLJU_c11350 putative positive regulator of sigma E activity + Term 68642 - 68677 5.1 - TRNA 68671 - 68746 87.5 # Thr CGT 0 0 70 25 Op 1 . + CDS 69091 - 69240 243 ## PROTEIN SUPPORTED gi|121534735|ref|ZP_01666556.1| ribosomal protein L33 71 25 Op 2 . + CDS 69278 - 69508 261 ## Vpar_1511 preprotein translocase, SecE subunit 72 25 Op 3 45/0.000 + CDS 69524 - 70063 691 ## COG0250 Transcription antiterminator 73 25 Op 4 55/0.000 + CDS 70155 - 70580 588 ## PROTEIN SUPPORTED gi|238927915|ref|ZP_04659675.1| ribosomal protein L11 74 25 Op 5 43/0.000 + CDS 70639 - 71355 857 ## PROTEIN SUPPORTED gi|227372934|ref|ZP_03856411.1| LSU ribosomal protein L1P + Term 71455 - 71489 5.0 + Prom 71434 - 71493 3.2 75 25 Op 6 47/0.000 + CDS 71530 - 72087 534 ## PROTEIN SUPPORTED gi|121534749|ref|ZP_01666570.1| ribosomal protein L10 76 25 Op 7 . + CDS 72135 - 72503 482 ## PROTEIN SUPPORTED gi|28394175|dbj|BAC57018.1| 50S ribosomal protein L7/L12 + Term 72522 - 72566 13.2 + Prom 72557 - 72616 4.6 77 26 Tu 1 . + CDS 72637 - 73164 762 ## COG0778 Nitroreductase + Term 73184 - 73223 8.1 Predicted protein(s) >gi|290781780|gb|ADGP01000013.1| GENE 1 3 - 4230 4426 1409 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 344 1 340 1588 67 27.0 2e-10 MNRIFKVVWSKSRQAYIVVSEYAKSRGGKTKIVAAVLAVIMGTAVQAPVWAANDRATLDP ATQKIVDEVMKQVEANYVKKGTGNGTAVDNDMVKPGENPVKANAEQYGAVAIGRNAHAVQ YRTVAIGAGAYANIDGGIAILGNTLQNDGISFGRDSYARGIAGIAIGRDTQSGVNSITIG RMARAAYSRPGNIGNPGAKVTHPLGGDDTNNPVFNKNAVAIGTNSLAGASNIVFLTPGTE NTYLDFASTANIWASRVYSRAQMTKIKDGTKKHISDRFYGEGDINTAASDDKKVNFYDVV RDSGTDQVAVGHHSRALGDQAIAIGSNSIAGRYSIVMGGNTFGDGKQNDSFYAMYLNNDG IFRKLSGYRKVDNNPGNPNEGSTYAGEAGVAIGTKAHVLTQMGTAVGALARIEQDSFGAV ALGAGASVGTQKAGHDSIGAVAIGMGSAAKGNGTVVLGARASAWPDSGDAHRITAVGYGT IAKNADSVALGSLAEADRGSDMAGYFYGYKAATIDQSKEAGSIQLKLKDGAADLIENYEV KVTPSAWEVPKATETDIENGIRTHVYAGLKGPAFKANAGALSIGKNGSTPDATDAITRQI VNVAAGTNDTDAVNVAQLRNVNMMVEADSAGAGTPKAFSDFLLDNARLKISGQSYLSTEL TQDKEGPRITLKAKTTELIANPDGSFSTKNHEDGLITASELVKRMNAAKQARDELEKKIG ELVYLNAKGEKLQQKGGKFFKVNPDGSLDESKEETPAAITSKRQGLQLANVNGAVTQLTP DGLADLSNISEKTGVNVNDISKIGWILSVPDDKYSEAVVHNRKVSFFGKDLAKVTAAGKG EEPRMITVTVDRKETGKAVEQEFLNNGFTQIRYVDANNKPLVRAQDGKYYYPVSDKDNTP DMSKPSVAPAARVADVESHPTVLTNVKHGADVINKTGDPTDGLADLSKDSQKSNVATVED LRNLGFVIKGKADDDSAVTGQVKHANTVEFAGEDLAHVVVTSKDGKHKVTVKVNKDDVTQ AVNAANAQKGTAPTAYVDKDGNPLVKGDDGNYHKVKDDGTLDNDTTDPAGVRLGEKDTPM QLTNVKPGTNEITAEGPTKGLADLEHAVPGTVATVDDLKKMGFVVADGANYHATVANAQT VKFVGEGLATVTGETKGDVRTFTVKVDKDEVAKAINADGAKKGTAPTTYVDKDGNPLVKD GDKYYKPNPDGTPNTTAGPVDPAGVRLGEKDKPMQLTNVAPATEAINKPNDPTNGLADLA KAKDGTVATVADLKKLGFVVSAGDNYSEKVQHAQEVNFKGEGLAEVSGKTEGEKRIITVK VDDKKVADAVKSINDKAGNAPTTYVDKDGNPLVKGSDGKYYKPKADGTPDTDGGAVDPAG VRLGEKDKPIQLTNVAPATKAIDKENDPT >gi|290781780|gb|ADGP01000013.1| GENE 2 4818 - 5201 502 127 aa, chain - ## HITS:1 COG:CAC2916 KEGG:ns NR:ns ## COG: CAC2916 COG0853 # Protein_GI_number: 15896169 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Clostridium acetobutylicum # 1 126 1 126 127 145 60.0 2e-35 MQFHMLKSKIHCATVTEANLHYVGSITIDAALMEKAHILPNERVQITDNNNGARLETYVI PGPPHSGVICLNGAAARCVQPGDVVIIMCYAWMQEEEAVTYTPTVVLVDGQNKIKEVRHL EEHGHIE >gi|290781780|gb|ADGP01000013.1| GENE 3 5204 - 6058 1047 284 aa, chain - ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 1 278 1 276 281 288 50.0 8e-78 MEVFRTVTEMRAYGAAQRAAGKKVALVPTMGCLHEGHLSLMKAAKQECDTVIASVFVNPV QFGPNEDYEAYPRQEEKDREALERAGVDAMFCPTPADMYPSGYGTYVQVESEITKKLCGA KRPGHFRGVATVVTKLMNITGATHAFFGQKDAQQVVVIRRFVEDLNLPVTIHMVPIVREE TGLARSSRNTYLSREEKASALILSQSLAKAEAAFQQGERNATALKQLVTTSLRQEPLARI DYVELYTFPALQDIETIQEESVLLAIAVYIGNTRLIDNCILGGR >gi|290781780|gb|ADGP01000013.1| GENE 4 6449 - 8176 1866 575 aa, chain - ## HITS:1 COG:CAC3178 KEGG:ns NR:ns ## COG: CAC3178 COG0442 # Protein_GI_number: 15896426 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 564 1 559 570 579 49.0 1e-165 MLASKLYCPTLRDDPAEAEVASHKYMLKAGMIRKNASGFYSFLPLARRSVLKIEKIIREE MDKTGAQEIMMPIVQPAEIWQESGRWDVYGKEMFKLADRHGNEYCLAPTHEELITTLVRN ELRSYKQLPVNLYQIQNKYRDEIRPRFGLMRSREFVMQDSYSFDTDQEGLEKSYQAMYEA YSRIFTRCGLQYRTVLADSGQIGGKHSHEFMALAASGEADIVTCTQCAYAADVEQATPNP LPAAAEPLQAIEKFATPHCATIEELVQAAGVPAEKTIKAVALDIDGKLVLCMVRGDHEVN EVAVQHVVGGHDAVPASAELLQQYGLVPGYMSPLGAAKTSEQFHILVDPTAMQIYNGVTG ANEEGFHYRHVTPSRDFTGVQVAPIRLITAADGCPECGAPVQLTRGIEVGQVFQLGTKYS EALQASFLDKDGKAKPFVMGCYGIGVTRTMAAAIEQYHDERGILWPVAIAPYEAVILPLN MKDEVMVTAARELYTQLSADSSEIVLDDRPERAGVKFNDADLIGYPVQIVVGKDTKTKGT VEIKVRRTGAKEAVPVRTAVGRVQAILRELRASGQ >gi|290781780|gb|ADGP01000013.1| GENE 5 8364 - 9302 1108 312 aa, chain - ## HITS:1 COG:CAC1373 KEGG:ns NR:ns ## COG: CAC1373 COG4822 # Protein_GI_number: 15894652 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Clostridium acetobutylicum # 48 306 2 262 278 147 32.0 2e-35 MKQEKQAAYGRGYMLHAEVRQAPAALVRATQLGVRSYCCPDMATLPNKDAVIVLCFGTTH TVAAHAGITPVVRDIQAAYPHMRVEIAFTSHIVVSRLARTQGRNVLLPAEALQKLRQEGY TRVLMISLDIIPGVEYAYKLALWEEYKTSFKQLVLSTPLLYWMGQEAQRDDIADFIRAME PALPPAENHGAVLWLAHGTPHPANAYYSVIQLRLQEILRRQVYLYSVEGWPNLASVLPVL RAQHIQTVTLMPLMLVAGEHARNDMATADRRQLERAGFHVRTYLHGLGENEAVRRLFLAR VREAREYLHDES >gi|290781780|gb|ADGP01000013.1| GENE 6 9399 - 10601 1342 400 aa, chain - ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 3 392 4 399 411 396 52.0 1e-110 MGLQDTPSGERLHIGFFGYRNAGKSSLVNAVTGQDLSIVSDTEGTTTDPVSKAMELLPLG PVLIIDTPGLDDTGTLGEKRVARTRRVLNKTDIAVLVADAAAGLRPLDMEVLQLIQQKGL PYLIVYNKRDMLENVPPAGEHEMYVSALKKQGIYELKERLAVLKPEEEACPIVKDLLQPG NLVVLVVPVDSAAPKGRLILPQQQTIREILDAHASALVVQTTELAATLQRLAYKADLVIT DSQAFAAVAKVTPSHIPLTSFSILMARHKGFLQAAIQGVRRIRTLQDGDCVLVSEGCTHH RQCEDIGTVKLPRWLREFTGKKLVIATSSGREFPEDLRPYALAIHCGGCMLNSRELQYRL KCAGDQGLAMTNYGTAIAYMKGILPRSLSVFPALKALAES >gi|290781780|gb|ADGP01000013.1| GENE 7 10626 - 11813 1193 395 aa, chain - ## HITS:1 COG:FN0304 KEGG:ns NR:ns ## COG: FN0304 COG2710 # Protein_GI_number: 19703649 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Fusobacterium nucleatum # 14 378 38 395 415 106 25.0 9e-23 MFMKEAVSRISTYSADTFGVCSALFELGGMTVIHDPSGCNSTYTTHDEPRWYDTDSLIFI TGLTEMDAVLGNEEKLLHDVETAAAKYQPRFITLLCTPVPLLMGTDFPALAKVLQKRTGL PVFFVATNSMQTYEQGIFKAFKMVAEHMVAAVSAPSSCCSWQPSFASQGQGLKVNILGVT PLDFAVNGSEKALRRCLTRQGFAVSSLWAMGSVYEEIRDAGRAEVNLVASYGGLGAATVL QERFSQPYVVGLPLPPLQEILAASLRTAAATGRVQYPLLTVRQEKETATVIIGESVYATS LAAALERVTGEGADVCCPLAAAPGTLGARDHQVRSEGALMEVLQAYKTIIADPLYEAIIP EGAKFIPLGHEAFSGRLYQASIPNLFKDFNSFFHI >gi|290781780|gb|ADGP01000013.1| GENE 8 11804 - 13129 1043 441 aa, chain - ## HITS:1 COG:no KEGG:CLJU_c23040 NR:ns ## KEGG: CLJU_c23040 # Name: not_defined # Def: hypothetical protein # Organism: C.ljungdahlii # Pathway: not_defined # 1 441 1 442 442 407 44.0 1e-112 MLKRIKGTPAPQGVYLPIAEAKFPSFFYDGLQYSPPARGTWNIVHTNMLVPESHQIYICA LGCLRGVVLTAAEMGALSRFSSIVVEEKHLFDGTMEDTVLRGTAEILSRLPKAPKACFIY PSCIHHFMGCDWQHVYKQLVSAYPHIAFVPCWMDPIRRHSKLTAEMRTRRQIYSLLEKQA VDGTSLNMIGSNLPVRPQCELSSLLRANGYRLRQLPTCTSYEEYLAMGSSFLNIGQEPLA HIALAALEKRLGQQQVYLSAAWNYEEIEANLQRLAQRLQIALPSYTETKQQCDRRLQEAL TIVGGRPIAIDFTAVTRPFSLARLLLERGFNVQRIYCDTAVPDDEADVALLQQHFPTVRV YAVRHAYMHAAARTDTDFLAIGQKAAYYTGTSHFVNVVEGGGWRDYAGIQEMARQLIKAV REEKSAAAYIQQKGWGCPTCL >gi|290781780|gb|ADGP01000013.1| GENE 9 13134 - 13889 867 251 aa, chain - ## HITS:1 COG:MJ0879 KEGG:ns NR:ns ## COG: MJ0879 COG1348 # Protein_GI_number: 15669069 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrogenase subunit NifH (ATPase) # Organism: Methanococcus jannaschii # 1 251 1 251 279 239 50.0 5e-63 MIKIAVYGKGGIGKSTTVCNMTAALADSGLRVMQIGCDPKADSTTALHGQRHRRTVLDLI REKEDQVTLADMIVRGYKNCICVEAGGPIPGTGCAGRGIIAALETLAEQGVYEQYKPDVV FYDVLGDVVCGGFSMPMRNGYADAVYIVTSGENMAIYAAANIAMAVRQFKDRGYARLGGL ILNRRNVLQETEKVQALAADIQAPVIGTLSRSTVVAAAEEAGKTVIEAFPESSMAEEYRR LAQAVYRDALR >gi|290781780|gb|ADGP01000013.1| GENE 10 13926 - 14930 1327 334 aa, chain - ## HITS:1 COG:CAC0809 KEGG:ns NR:ns ## COG: CAC0809 COG0309 # Protein_GI_number: 15894096 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 1 334 1 335 335 296 45.0 4e-80 MSACITLAHGAGGKKTAELIDTVFKAHLANPLFTGDDAAVLPTPGKKLAFSTDGFIVSPS DFPGGNIGKLSICGTVNDLACMGAEPLYLSCAVVIEEGLPLCDLDRYVKTMAETAAEVGV QVVAGDTKVAGKGQVDRIFITTTGIGKLTDGVETSGAKAVPGDAVIVTGDIGRHGCTILL ARNTFGIDAAVTSDCAPLWGAVESMLSVTKDVHVIRDATRGGVGTVLYEIAAQSKVGICL QSAQIPVAPAVRGACGMLGLEPLYLACEGRMVVIAPAAQAPALVAALRRTPYAREAAVIG RVTAEQAGHVVMETEIGAKTMLPPPRGELLPRIC >gi|290781780|gb|ADGP01000013.1| GENE 11 14927 - 15982 992 351 aa, chain - ## HITS:1 COG:CAC0811 KEGG:ns NR:ns ## COG: CAC0811 COG0409 # Protein_GI_number: 15894098 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 3 346 10 358 361 297 43.0 2e-80 MAGTKKRTALEIIRRYDGPPVRIMEVCGTHTHEIFRLGIRQILPPQVELISGPGCPVCVT PIEYIDEAVWLALEKKVTLCTFGDLLRVPGTEMSLAGARSLGADIEIVYSPIDAYTYAAA HPEKETVFLAVGFETTTPAACLAVKQARAAGLKNFSVLTANKTMPMAYASLKGSADVFLY PGHVEAVMGTEHCEALVAEGVSGVVAGFTAKELLTAFAVILAKYPLGKPFFVNCYPRVVT SEGSISGKELMASVMEPCDAEWRGLGVIPLSGLTLRPAYAAYDTRKKYAVPRLKGKVNPL CRCGEVLQGKCKPSQCGVFGKGCTPDHPVGACMVSQEGACSAYYQYGGMES >gi|290781780|gb|ADGP01000013.1| GENE 12 15984 - 16190 425 68 aa, chain - ## HITS:1 COG:AF1369 KEGG:ns NR:ns ## COG: AF1369 COG0298 # Protein_GI_number: 11498965 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Archaeoglobus fulgidus # 1 66 1 66 77 57 42.0 7e-09 MCVGLPARVVTIKNGMALVDASGAKREVSAALIAGLDPGDYVMVHAGMAIAKITADDAAE TDDILEDL >gi|290781780|gb|ADGP01000013.1| GENE 13 16277 - 18574 2061 765 aa, chain - ## HITS:1 COG:aq_672 KEGG:ns NR:ns ## COG: aq_672 COG0068 # Protein_GI_number: 15606085 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Aquifex aeolicus # 2 762 4 743 746 566 41.0 1e-161 MKTYSISVFGVVQGVGFRPFVCRTARELGIKGQVCNKGAYVEILLQGTEKQKNTFLTVLK AEAPERAVILKIDTMEVQKEPYASFEIVESEKEGGTVLVSPDIGVCPTCQKELTDPANRR YQHPFINCTSCGPRLTILESMPYDRERTSMKEFPMCEKCAAEYKDPTSRRYDAQPVCCPD CGPQVYLLDRAERGRDAISAARRAIAAGKIIAVKGLGGFHLCCDATDETATARLRTLKHR PVKPFAVMMRDSSAVKNACYITDKQQEVLEGYQKPIMLLKRRTDSWLAPSVAPHNPQVGV FLPYTPLHMLLFTYDDGVQVPPALVMTSANVSGAPICRTEEDIRQEMLSCCDLVLSHDRK IRLRADDSVMDWYDNRPYMIRRSRGYAPLPVFAGKGRKKQVLAVGGELKNSFCIGKDNLF YLSPYIGDMSDMRTVAVLKESMRRFSSLLAAKPAVAACDLHPQYNSRQVAEELGLPVVPV QHHYAHVLSCMAENNYMDRVIGVAFDGTGYGTDGTIWGGEVLLCDPKSFVRYTSVPPFKQ CGGDAAAREGWRIAVNLLYDFYGEKEREKAEALMEELHLASSEERRAQLYMATERVNTVT STSVGRLFDAVSAILGICRESTFEGEAAMRLQFVAEKWPAEEYSFGFEFMPKPLCKRGAF RVMNFAEAWKDVLDDIEMECSIEETAYRFHVSVAEMVAGACMTARQETGIKVAALTGGVF QNRLLLRLCEEVLQENGFNVLTHSLIPPNDGGLALGQAVHAMYRE >gi|290781780|gb|ADGP01000013.1| GENE 14 18577 - 19608 1091 343 aa, chain - ## HITS:1 COG:FN0304 KEGG:ns NR:ns ## COG: FN0304 COG2710 # Protein_GI_number: 19703649 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Fusobacterium nucleatum # 8 342 34 393 415 73 22.0 8e-13 MKGLWKYISPFAPDQSGAAAVLYGLGGIVVICDAGGCAGNICGFDEPRWFSGRKSAVFSA GLRDMDAIMGRDDRLVAKICRAAEHIQASFIAIVGTPVPSVIGTDYQALERMLAKKIEVP ILSLQTTGMSLYDRGMEAAYSALDKTFGAKTAAVDAHTVGVLGAVPLELMHPRDGLAIHR QLVREGWQRVLLFDHLEDYEQAGRAKLNIVVSPTGFLWAEALKKRLGTPYICRYFGYEAV TAHKKMFFQKNVLIIHQQVAANALATELLRAGAASVHTASWFMSPSQWARPGHTVLREED DFRALVADGDFDCIIGDVYFKRAIPEFLGTYIDYPHFAVSGRG >gi|290781780|gb|ADGP01000013.1| GENE 15 19605 - 20909 1178 434 aa, chain - ## HITS:1 COG:all1438 KEGG:ns NR:ns ## COG: all1438 COG2710 # Protein_GI_number: 17228933 # Func_class: C Energy production and conversion # Function: Nitrogenase molybdenum-iron protein, alpha and beta chains # Organism: Nostoc sp. PCC 7120 # 45 288 38 290 480 73 28.0 5e-13 MNTLQPYSITMAALAAAGENHIPEELISSTHLIYNSPAALAFNSPGAQGFGVKRAGLAVP DSIMLLIGPGCCGRNTTILSEMGGYSERFFYYQMDDTDIVTGRHLTKIPRAIEEILQAVT KRPSVVMVCMTCVDALLGTDMERVCRKAAVKAGLPVVPCYMYALTREGRNPPMADVRRAV YSLLEKQTRHRRTVNLIGFFAPLQDDCELYEILHKMGITAIKELARCRSFEEYKTLSQAN FNIILHPEARLAARDMQERLGIPAVELTRLYQVSKIHTQYQALGAVLGTTAEDGARWEQA RQAVAKMREKHAGTTVSIGEMQNGNAYEMALALTQYGFVVKEIFANLSAQDFVYVRHLAA VSPDTKVYSNLSPTMLYYEDRDCLVDLTIGKDCAYYHPHAAHVYWDEDIQPFGYAGVISL LQAVHTALTERRNA >gi|290781780|gb|ADGP01000013.1| GENE 16 20909 - 21661 752 250 aa, chain - ## HITS:1 COG:MA2032_1 KEGG:ns NR:ns ## COG: MA2032_1 COG1348 # Protein_GI_number: 20090880 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrogenase subunit NifH (ATPase) # Organism: Methanosarcina acetivorans str.C2A # 1 243 1 241 339 244 52.0 2e-64 MLKIAVYGKGGIGKSTLTSNLSAAFAYSGKKVIQIGCDPKADSTLNLLGGVPLESVMSYM RVHDEDPQSLAEISRRGYKNILCIETGGPTPGLGCAGRGIIATFALLEDLGLFETYCPDV VLYDVLGDVVCGGFAAPIREGYAEQVLIVTSGEKMALYAANNIAVAVQNFADRSYAAVRG IILNRRNVPDEEKKVKAFSAQIGVPVIADIPRCDDINHSEEQGKTVIETNPFSSISQTFL QLATLLGKEA >gi|290781780|gb|ADGP01000013.1| GENE 17 21670 - 21921 378 83 aa, chain - ## HITS:1 COG:no KEGG:ELI_3375 NR:ns ## KEGG: ELI_3375 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 82 1 82 84 108 67.0 8e-23 METRLALIGIIVGERTATDKLNEILHEYGEYIVGRMGVPYKDRKVHVISIIVDAPQDCIS ALSGKLGMLPEVSTKTIYPPLPR >gi|290781780|gb|ADGP01000013.1| GENE 18 22099 - 23367 1549 422 aa, chain - ## HITS:1 COG:DR0656 KEGG:ns NR:ns ## COG: DR0656 COG1301 # Protein_GI_number: 15805683 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Deinococcus radiodurans # 1 421 1 427 431 340 47.0 2e-93 MKKLGLSTQILIGLILGALVGYLFPDVGDKLKPFGDGFLRLIKMIVVPLIFSTLVMGIAG TGDFKKLGRLGGKSIIWFEFATTIALAVGLIIMNITEPGLGVHIAASAGDAGQVAAAGKH SINLVDYVVHIIPTNIIDAAARQDMLQIILFACFFGVGVAHIGKDGETIVRGCRCIAEAM FKVTGYVMHLAPIGVFAMIAYTVGSYGIEMLIPLGKLIASVALATFLFIVIVAVIAGAFT RINFFHVLKSLKDILLLAFSTASSEAALPGAMKRLETLGVPKNIVTFVMPTGYSFNLDGS TLYSSACILFIAQLYGIQMPIEQQILVMLTLMLSTKGIAGVPGAGIIVVAATAAAFHLPT EGVAILLGIDRILDMIRTICNVCGNCMATMVVACWEGEMNREKFKRRYDDFVQGKIEEYS QN >gi|290781780|gb|ADGP01000013.1| GENE 19 23560 - 23763 327 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968125|ref|ZP_06559670.1| ## NR: gi|290968125|ref|ZP_06559670.1| hypothetical protein HMPREF0889_1366 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1366 [Megasphaera genomosp. type_1 str. 28L] # 1 47 1 47 67 70 100.0 3e-11 MFCPECQTELREGVRQCPICGTRQPITLPPPEPTMPQAPPKTLTPYRLIGFLIILLILLI GLFHLQQ >gi|290781780|gb|ADGP01000013.1| GENE 20 23853 - 24827 1058 324 aa, chain - ## HITS:1 COG:FN1584 KEGG:ns NR:ns ## COG: FN1584 COG2367 # Protein_GI_number: 19704905 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Fusobacterium nucleatum # 76 323 9 257 264 135 33.0 1e-31 MYRGNSRILREKTYAGKTTNKKRKKRGLRKVLLVIIILFLAVTAARHFGYIPYPMQAAQK TTVTAAQQAAHDRTLQRIQQQLQSQDGIYAVYFQPCKAGALPVIYNDHTMRSASMIKVFI LSAAMEQIKQGKMSFDQTITLQEADKVGGAGSLCGYPDGSVVDVRTLLKLMITQSDNTAT NLMIDLVGMDAINHYMQQHGYTETRLEWKMMAQTAPGETRKNRTSVRDLGTWFRRVYEKK CVDPALDQYMIDLLLGQTDTECFPTALPEAKIAHKTGEVTNLYDDGGIIFTSHGDYILCI MTDQIARYDGIETMKKIARMLVES >gi|290781780|gb|ADGP01000013.1| GENE 21 24878 - 26041 1115 387 aa, chain - ## HITS:1 COG:BH1812 KEGG:ns NR:ns ## COG: BH1812 COG4552 # Protein_GI_number: 15614375 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Bacillus halodurans # 30 377 23 376 386 130 28.0 5e-30 MKFRLSTPADRAVVESLWDYCFEPKEDPFFQWYFTKYYKPEQVLLGEEDGEVQCLTHLNP YTLRLRGRDVETSYVVGLATQPAARSSGAGGKLLAAALREMRQKGQYIQILMPSKAGFYQ PYGYELYCHQWRETLSLDALRPLTEKNMRYKFVQSFQAWKDLKQVYDAYTKSLSGYAVRD EASWHSHIEAQLAEGNIVLCYDCEEPVGYAFYKLGDPIIYAGEFIYSSWKGKKGLLAYMY NHRSQGDVFQWNEGLQDQSYRFYPDGKKGHETIPFMTGRIVDVPHCLEAIPYAKTVRQEM VLHITDPLAEWNTGWWKLTVDNGCGKVEKTTCRQGVSMPIGSLGLLVWGAVQAKDLAFYD KLRGTKEELAALQEVFPPTSCFINEWY >gi|290781780|gb|ADGP01000013.1| GENE 22 26119 - 27039 999 306 aa, chain - ## HITS:1 COG:jhp0277 KEGG:ns NR:ns ## COG: jhp0277 COG4866 # Protein_GI_number: 15611347 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 9 306 2 290 290 153 34.0 3e-37 MEGIVIIQFKEIQLEDKPCFDEYFKQRRYEQADATFMALFAWQKPYEIQWAEENNILYIR SGRGNKQFWIPPFTGKDSDFIKGLERMQQWFADHGYPFLLKGVTPAAAERIRAYCPECYT FTPDRDNYEYVYLTQNLINLSGKKYRQKKNNLNHFRSEYIARWEYEPITEDILDECLAAE TTWYQQHADQEDAAELGGERQAIEQVFRHWTALGATGGAIRIFNKIVAFSVGEMLNNDTA IIHFEKSDPQIRGLYQAINHEFVVHAWSHTTYINREEDMGIPGLRHSKESYNPCHFVEKF DVTLKD >gi|290781780|gb|ADGP01000013.1| GENE 23 27049 - 27657 467 202 aa, chain - ## HITS:1 COG:CAC2969 KEGG:ns NR:ns ## COG: CAC2969 COG2094 # Protein_GI_number: 15896222 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Clostridium acetobutylicum # 4 200 1 200 205 151 42.0 7e-37 MKTMTWSKEEFQDAAIHIAPKLLGQYLIHCTKTAEYIGKIVETEAYGGFYKGAADDGSHA FRGRTLRNAPMFEAGGISYVYLIYGMYHCFNVVTSAKDDAQAVLIRAVEPVGGIEAMLHN RRREKMNPAVTNGPGKLCAAMEISRQENGLPLWGDSLYIAGSPYGERFSIGTGPRIHIEY AEKGKFFPWRFFIKGNPFVSKG >gi|290781780|gb|ADGP01000013.1| GENE 24 27661 - 28398 676 245 aa, chain - ## HITS:1 COG:BH2137 KEGG:ns NR:ns ## COG: BH2137 COG1414 # Protein_GI_number: 15614700 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 9 245 1 249 251 110 27.0 3e-24 MEQSHTRGLLKSVEKSLDVLDLFLKSNRGLSLKEIAGYTTLNISTAFRIVNTLAERQYLQ RDLKTRQYRLGDKALALGRLSLRTGNIGMLSKPYLRRLQQDFNETASIYIAEGDSRLCLE AVESSHALRRVIPVGESVPIYKGAAGKVLLAWSSPAEQQRICEEYGAITLSALHSIRRHG YAVTQDESEHGLFAIAVPILQGNCGIAAALTIAGPTMRFYDSVRQKMLFTLNQYANEISH LLGHH >gi|290781780|gb|ADGP01000013.1| GENE 25 28420 - 29499 1007 359 aa, chain - ## HITS:1 COG:PA2528 KEGG:ns NR:ns ## COG: PA2528 COG0845 # Protein_GI_number: 15597724 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 46 357 82 391 426 94 29.0 2e-19 MQLKKWLSLIGVVAVVIGLAGCSKNMDVKVETVSFSQAPVTLTLEGSVSSLTVVNVIPKL SGKIVTTPLVKGQEVQAGEVVAKVDDSIYRRQVQTARYATSAVAAPVTPKVDPAEQAKLA NWYNLGAISRVEYDRLMRQAAVAAVPVTAGTGTAALSSSVEAAQAMLANAVIVSPIAGRI TAVADNPSLAIAGKVLATIQQISPLVVSVTVPENYIKTLGDAWHKGGLHIDIMNPSGKTE PGRLTYLTTVKDPSTGTFVAKITFTNADKSFSPGELCYVRLSTERQAPQLTVSKKAVQTK DSGDFVYIVNDKGIVDTRAVLTGDTVAGRVVILDGLQAGERVVSDPPASLQIGMKVKTR >gi|290781780|gb|ADGP01000013.1| GENE 26 29519 - 29767 249 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968132|ref|ZP_06559677.1| ## NR: gi|290968132|ref|ZP_06559677.1| putative sigma-K factor processing regulatory protein BofA [Megasphaera genomosp. type_1 str. 28L] putative sigma-K factor processing regulatory protein BofA [Megasphaera genomosp. type_1 str. 28L] # 1 82 1 82 82 96 100.0 5e-19 MQYWWIILGIVILFFLNKLILAPLRKLFFHIISGLVVLHIVNTYGHILHLAHVPITLVTG LIIGIFGFPGTVLVTLYYTFLH >gi|290781780|gb|ADGP01000013.1| GENE 27 29778 - 30368 811 196 aa, chain - ## HITS:1 COG:BH0036 KEGG:ns NR:ns ## COG: BH0036 COG0353 # Protein_GI_number: 15612599 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Bacillus halodurans # 4 196 6 198 198 222 53.0 4e-58 MDTPLDRLTEQFRRLPGIGIKTARKLAYYMVQEPQEKVNEFIHALQEAKQKMCFCSQCFN LSSQDPCPICSDRKRDRSMICVVETPQDVLAVERSGNYGGLYHVLQGALSPLDGIGADNL RIKELLQRLENTEIKEVIIATDPDVEGEATALYLARLLKPVPIRVTRIARGLPAGGDLEY ADEATLAGAVANRLEM >gi|290781780|gb|ADGP01000013.1| GENE 28 30368 - 30685 191 105 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 4 102 9 107 114 78 37 1e-13 MFGGNMQGMMKKVEKMQKEMERLQNELKNRTVEAGVGGGALTITINGAKIVQSVHIDPKI VDPEDTEMLEDLIVAAVNEANKKVDEMMSEEMSKITNGMRIPGLF >gi|290781780|gb|ADGP01000013.1| GENE 29 30704 - 30868 147 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968135|ref|ZP_06559680.1| ## NR: gi|290968135|ref|ZP_06559680.1| hypothetical protein HMPREF0889_1376 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1376 [Megasphaera genomosp. type_1 str. 28L] # 1 54 1 54 54 100 100.0 5e-20 MRDTGSSEFETEAAHWSAAAGVPAMDGETRALMEPLLKIVGECNIYREEKNKLN >gi|290781780|gb|ADGP01000013.1| GENE 30 30892 - 32589 1395 565 aa, chain - ## HITS:1 COG:BS_dnaX KEGG:ns NR:ns ## COG: BS_dnaX COG2812 # Protein_GI_number: 16077087 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Bacillus subtilis # 1 407 1 403 563 326 42.0 8e-89 MAYVALYRKWRPKTFEDVVGQRQITETLQKAIIMDKVAHAYLFSGPRGTGKTSTAKIFAR AVNCEQGTKGHPCNTCEICRHIMRGESLDVVEIDAASNRSIEDIRTLRETVKFMPAEGKK KIYIIDEVHMLTIEAFNALLKTLEEPPAHVIFILATTEPERIPITILSRCQRYEFRRLTS DDIAARLLYVAAQEHLSLAADAARVLAVKAEGGMRDALSMLDQCVGTGATVLDADTVRNI LGLIGMEWVFSFCRVLMDNDGREIIRKIDEIIHLGKEPTILLTACIEHLRALVLCRADAN AAVLSSYGDMAPLLQEQAKRIQSGRLFDMLQILQETLWQAKTSPMPRIVVEMGMLRAAQP VPAAKSGTEPVSWGQRLQALEEEVHRLRRQQVAGSENNVAALSPATENQEGVVESSAPVR VANTTVPLPSFGDTDSGTVAEVIPENKKTEEIPVLPEADTEEAATVPAADTFSYTDVFKQ VETILKKEKMAAVSRCFACGTLFYLAEGQAVMTYNSPFHMEIVNGEKAGKCIEKAFSQVT GQVCRVQNFLAADPMLGEFEKKNSP >gi|290781780|gb|ADGP01000013.1| GENE 31 32911 - 34230 1728 439 aa, chain - ## HITS:1 COG:STM3239 KEGG:ns NR:ns ## COG: STM3239 COG0814 # Protein_GI_number: 16766538 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 15 439 16 443 443 555 71.0 1e-158 MKYESVSESARRVFPWEKAGMSQTEWRKAVAFDSTDWGWVILSIGMAIGAGIVFLPVKVG LAGIWVFLLSSIIGYPAMYLFQRLFINTLAKSPRCEDYPGVIGNYLGKNWGFFLGILYFI MLIIWVFVYSTAINNDSASFLVTFGITKQSLAHNPLYGLAIICLLVALASRGEKVLFKIS TFMVLTKLGVVAVLGILMVQHWNLANIGAFPDMAYLIRETIIMLPFTLTSILFLQSLSPM VISYRSHNTSIEVARYKSLRAMNIAFGILFVVVFFYAISFTLAMGHEQAVMAYDKNISAL ALAAKGIPGESVKIMSLILNIFAVVTAFFGVFLGFREACQGLTMNALKRVIAEDKISTRA VSFGILVFAVLMSWGAIILNAPVLSFTSICSPIFGLVGCLIPAYLVYQVPLLRELKGLSL YLIIATGILLIISPILAFS >gi|290781780|gb|ADGP01000013.1| GENE 32 34446 - 35285 1132 279 aa, chain - ## HITS:1 COG:BH3412 KEGG:ns NR:ns ## COG: BH3412 COG0253 # Protein_GI_number: 15615974 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Bacillus halodurans # 1 276 1 280 286 243 44.0 3e-64 MKFVKMHGLGNDFVFIEDKEGKNKDFSQLAVKMCKRHTGIGADGLIVIVPSEKADVRMRI INADGSEAEMCGNGIRCFAKYVYDHHIMAKDEFTVETLAGIMKPKVLTGEDGKVQLVTIN MGKPFPERRKIPMNGPSGTVINEPLTVDGKEYRITSLLMGVPHTMIYVKDVEQVDLPVLG PKFETHPAFPKKTNMNFVQCIDSHTIKVHTWERGAGATLACGTGSCACAVGSFLNGFTGR QVDVQLYLGTLHIDYRETDGNVYMTGPAAVSYTGEWEEK >gi|290781780|gb|ADGP01000013.1| GENE 33 35413 - 36255 808 280 aa, chain + ## HITS:1 COG:CAC2818 KEGG:ns NR:ns ## COG: CAC2818 COG2207 # Protein_GI_number: 15896073 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Clostridium acetobutylicum # 1 268 1 274 279 182 36.0 6e-46 MYKKTGYLQEPLKLFYVQDSTEWIYPYHYHDFHKITFFLQGNVTYEVEGKSYILKPYDII CVAAGQLHRPIISDQKLYERIIAYIAPEWLYTYQQKACDFSPIFAPSHAPVLRQSSQTET LADTIRRLRQTWYEGQGNKLLKDTIFLEAMLYLSEGLKKKTVTTVKLGNHNEKIQQIMSY IHCHLKEKLTIPILAEQFYVSPDHLMHLFKKETGYSVGTYITTRRLILAKHYMNAGLPLT EICYECGFTQYSTFYRAWKKYYRTKPRDRGSSVIEDRPLE >gi|290781780|gb|ADGP01000013.1| GENE 34 36321 - 37088 678 255 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0637 NR:ns ## KEGG: Selsp_0637 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 41 202 26 198 255 71 31.0 4e-11 MNKRVATWAVAAAVLFAVPVCLQAATPVVTIERVTANTADVANESIHWLAPAQGRWYSTK GHAAAYIKGNLFNGCLVTDGDNMTEDYPRSGNFYITEAAGKRQIHLDLLGHNIHQYLIIN DHQALRRSAKADYNETLCGAYLGMTDQEIIHLFGVPDRVAEDQGMERWQYSHPHLSLFVK GGILLAVRAYADSGAYFGKSGLTVTAPCSVFAKTYGWTQVPQRPAAEDIQSPAFSLGKGE FLRFGKEYTELTIFS >gi|290781780|gb|ADGP01000013.1| GENE 35 37234 - 39534 2234 766 aa, chain - ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 762 9 760 761 982 63.0 0 MITLYGEGVYVIKGKDPVPAHEQEQKIGKEMAAAYRDKAKQGTISYGILQTHNKSKSADL LQIQFDAMASHDITYVGIIQTAKASGMHRFPLPYVLTNCHNSLCAVGGTINEDDHVFGLS AAKKYGGIFVPPHIAVIHQYMREKMAGCGKMILGSDSHTRYGALGTLAIGEGGGELVKQL LQDTYDIPYPEIIAVYLTGTPDPAVGPHDIALAIIGAVFKQGYVKNKIMEFIGPSIKHMR TDFRNSIDVMTTETACLSSIWQTDEDTEQYLSLHGRKEAYKKLAPHETAYYDGMIYVDLS KIRPMIALPMHPSNVFTIDEFKRQAGDILRMTEKDIQKRIGGNNSAAFLTDKLQDGKFYV QQGVIAGCAGGNYGNIAAAAHVLAHKNCGNDMFSLEVYPSSQPVYMDLIRKGCVTSLMAA GAVVKTAFCGPCFGAGDTPANNAFSIRHTTRNFPNREGSKPGNGQFSAVALMDARSIAAT AGNGGCLTSAEGYLDEYVEPEYIYDDMVYNKRVYEGFGKEKSDTALIYGPNIKDWPELPP LPEHLVLKVCTKISDPVTTTDELIPSGETSSYRSNPLGLAAFTLSRRDPDYVMRAKAAAM LEEIRKKEVAEDRYADSVLKEIYKKMKIAVGSADWKDTGIGSLIYCVKPGDGSAREQAAS CQRVLGGAANICREYATKRYRSNVINWGMLPFQLKEEASFSVDDYIFIPFVRSRLQEGKL HFTGYILDHTVRPVSLYIEPLTENEKNIILSGCLINFNRQRKQNNI >gi|290781780|gb|ADGP01000013.1| GENE 36 39819 - 41162 1223 447 aa, chain + ## HITS:1 COG:L67186 KEGG:ns NR:ns ## COG: L67186 COG0372 # Protein_GI_number: 15672652 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Lactococcus lactis # 19 447 14 441 441 381 44.0 1e-105 MVDNSIYLAQFYGKSQNYTQIPRVWYNKYGVKRGLRNEDHTGVLVGLTRIADVIGYTRDE EGKKINCPGILYYRGINIDDLVTKESYQGYLYEQASFLLLFGYLPNRQELTDFCAILQKN YDLPNDFLEMNLLRLPGKNLMNKLQHCLLTLYNYDSDPDNTDVYQTLQKGLNIMSKLPSI AVYAYMSKMHYYERQSLVIHYPCSNYSTAENILAMLRPSCTFTEQEAKVLDLLLFLHADH GGGTNSTFANIVVSSTNTDIYSGMAASIGALKGPRHGGANIKVSLMMEAFLKEIGPYASD QEITACIQSLLQKKFFDRQGLVYGFGHAVYTLSDPRAELIRNYCKILAGEKKKEHIFTFY ERFETIAKSYLSKTKETDICCNIDYYSGFAYELLGIPRDLYTPLFVISRFVGWLAHNIEH KLYDNRIVRPAGKYVGHLESYIPWEER >gi|290781780|gb|ADGP01000013.1| GENE 37 41162 - 42160 1054 332 aa, chain + ## HITS:1 COG:CAC0972 KEGG:ns NR:ns ## COG: CAC0972 COG0473 # Protein_GI_number: 15894259 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Clostridium acetobutylicum # 3 331 6 334 334 327 48.0 3e-89 MKSITVFKGDGIGPEITAAVLQILKAAHAPYEYEEFEVGEKEYKKNGALIPEAAFRSFEK TKLLLKAPITTPIGKGFRSLNVTLRKKYALYANIRPARSSAVIPTPFPDVDIVTFRENTE DLYIGVEYAMDADTIHAVKLITRKASEKIIRAAFTYAQKHHRKKLTCVHKANILKQSDGL FLHTFYQIAEEYPHIIAEDKIIDNLCMQLVMHPAQFDMLVMPNLYGDIVSDLTGGLIGGL GLLPSMNIGTTYAMFEAVHGSAPDIAGKHIANPTALLFSACLLLEHTGEQEISQRIKKAV QTVWETTNIRTPDLGGTATTEEYTQAVIRQLH >gi|290781780|gb|ADGP01000013.1| GENE 38 42205 - 43002 679 265 aa, chain - ## HITS:1 COG:FN0388 KEGG:ns NR:ns ## COG: FN0388 COG3315 # Protein_GI_number: 19703730 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Fusobacterium nucleatum # 4 265 9 269 269 236 44.0 3e-62 MDTLQGVSATSLLTLYVRAIDASTAQPVLGDKKAGAIWRQVKESIDYTSWKTAKKSYYGI LARAFIIDREVKKFLSLHPDSIVISLGCGLDTRFYRIDNGFIDWYNVDFPEIIHLREQFL TPHKRIHNIGASLLDAAWAKQVDTIGRPVLFVSEGVFMYFTTSDIQKILQILQTNFSCFT MYLDLLSKYLVHHSKQHDMCRYMEAEFTWGSQHGKEIVMWAPRIKQTDLLSFTPKLLQIG PWYWRFMAPIMYILNNRLGIYEYKR >gi|290781780|gb|ADGP01000013.1| GENE 39 43098 - 43535 720 145 aa, chain - ## HITS:1 COG:BH1018 KEGG:ns NR:ns ## COG: BH1018 COG0783 # Protein_GI_number: 15613581 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Bacillus halodurans # 2 141 4 142 146 94 42.0 5e-20 MEKLIEQLNAYMANLAVLHRKLQNYHWNVTGPQFFTLHAKLEEYYTHVNEGIDVVAEEIL KLQGEPLGTMASYLKIATLKEAENKKISADAVVKSVIADFTTMKKQICDIKAAADAANVY EVSTMADDFIAEYSKAIWMLRQSQE >gi|290781780|gb|ADGP01000013.1| GENE 40 43692 - 44147 608 151 aa, chain - ## HITS:1 COG:alr5216 KEGG:ns NR:ns ## COG: alr5216 COG1253 # Protein_GI_number: 17232708 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Nostoc sp. PCC 7120 # 4 143 298 433 442 121 45.0 4e-28 MDIMKVVALFREHSVHEGAVLDEYGNFTGIVTLHDILEELVGIMPAGEEEKKEEANKIIC RNDHEWLMDGLLTIEEFKDFFKLEEELPEEEEDLYKTLAGFIVYGLGRIPKETDTYVWKN FTFEVMDMDHLRVDKILVIVGKSDKTEKTVM >gi|290781780|gb|ADGP01000013.1| GENE 41 44207 - 45055 900 282 aa, chain - ## HITS:1 COG:alr5216 KEGG:ns NR:ns ## COG: alr5216 COG1253 # Protein_GI_number: 17232708 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Nostoc sp. PCC 7120 # 4 271 3 270 442 233 44.0 3e-61 MEYSLGKQLCIIVLLIFANGIFSLLEMAVVSCRKARLETMAEDGGKAASIVLKLQENPNK MFSTVQFGITVVALLTGVYGGTELASPLAARISHFSIAAPYAHTIALTVIVAVITYLSII FGEIVPKRIAIDNPESVSCILARPMLYFSLLCTPIVWILAASTNAVTKILGISQHISAPV TEEEIKLLLEQGAKLGAFEKEEPELVDRVFRLADMDVSDIMTNRMQIDWLDIENEEYDIM KEMLSFNHNNLPVGKGSLDDFCGMISVQQVFKCYYEAVKEKK >gi|290781780|gb|ADGP01000013.1| GENE 42 45166 - 47088 2333 640 aa, chain - ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 9 640 8 637 637 819 64.0 0 MAEGEKKDYGAEQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEVVDNSVDEALAGFCT HIEVTIEADNSITVSDNGRGIPVAMHKVGKPAVEVVLTVLHAGGKFGGDGYPISGGLHGV GISVVNALSIQTEVKVKRDNYLWDISFARGITEKKLTKTRALEPGEETGTTVHFKPDPEI FPDVVYDFDTLKTRLRELAFLNKGLHITLTDNREHNKQEVYCYEGGLISFVQFLNENKQA VHPTVIPLDGEKNQVMVDIAMQYNDGYSENILTFVNDIFTEEGGTHLSGFRSALTRTIND YGRSAGIIKENEDNLSGEDVREGLTAIVSVKVREPQFEGQTKTKLGNSEVKGIVDTLVSD GLREFFGEHPVEAKSIVNKTITASRARQAARRARELTRRKNALEISSLPGKLADCSEKSS ERTEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKIINVEKARLDKILANEEIRAMITAFG TGIGEEFDITKRRYDKIIIMTDADVDGAHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQ VRKGKQMWYFYTDETMNAKLDELGRDTNNIVVQRYKGLGEMNPEQLWETTMDPEYRTMLQ VHLEDAVEADRIFSVLMGDKVEPRRQFIQENAKKVRNLDL >gi|290781780|gb|ADGP01000013.1| GENE 43 47157 - 47417 302 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968149|ref|ZP_06559694.1| ## NR: gi|290968149|ref|ZP_06559694.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 86 1 86 86 151 100.0 1e-35 MYLHIGGNYMVNIQSIVAFFKKHPKRSEKSNPLQKYYRPLIFVHTEKDTPVRSYIVTEEY IYASPLTLKTLIKRYIGCFSKIAYRK >gi|290781780|gb|ADGP01000013.1| GENE 44 47420 - 48313 625 297 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0005 NR:ns ## KEGG: Vpar_0005 # Name: not_defined # Def: protein of unknown function DUF721 # Organism: V.parvula # Pathway: not_defined # 8 286 1 279 300 107 28.0 4e-22 MNHKKGTLEPVGVSLADILEKNHLAVPLKIFLLKKDWQKVAGEQIAAFSYVQKLHGFVLY IGVLNSVWMQHLFMYKQKLIQNINQYLEEAIVKDIRFVHSGKEKTSSIYSEKTDRKTSSV SIKNQVLSKEIVDKIQRETSHVIPELRDIIRKVRYTQEKKIQAYRQMGIKKCPKCGNWLD HGEKICLFCRLQERHEFKYKIRKIILSMPWISLEECITQGYVPQGCNSFTELYNEVRRDC IYQYIEKIHFNVDTSEDDLVLALLITRYKPTEITDEFVQRLTEKYRQAKKSVKQEGK >gi|290781780|gb|ADGP01000013.1| GENE 45 48303 - 49406 1073 367 aa, chain - ## HITS:1 COG:CAC0004 KEGG:ns NR:ns ## COG: CAC0004 COG1195 # Protein_GI_number: 15893302 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Clostridium acetobutylicum # 1 341 1 337 363 238 38.0 1e-62 MKITGVRLFNFRNYKNMELNFHNMIHIFYGNNGQGKTNLLESLYIAGIGKTYRGIADREL IRWEQEEGSIIVRFLRNHVEQQVKIILSRVSSKQLWINETKTIGREFFGSIPEILFSPDD LQLIKGAPSLRRKFMDMELSQVNRMYYRCLLQYNHILAQRNALLKEVRYDKNISFAEWDT QLAVLAADMVKKRLEMLKKINVLADKIHKELTQGKESLHVYYKQPYNQDRHTVILQASQY ARLLQENIAADSYKNATSIGPHRDDFTFCIEGKEAKKYASQGQQRTAILSLKLAELEFVY SEIGEYPILLLDDVMSELDLLRRKQLLQFVHQRIQTFITTTDPLLFSMLQEGCQWKIEDG KVIQYES >gi|290781780|gb|ADGP01000013.1| GENE 46 49403 - 49624 183 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968152|ref|ZP_06559697.1| ## NR: gi|290968152|ref|ZP_06559697.1| S4 domain family protein [Megasphaera genomosp. type_1 str. 28L] S4 domain family protein [Megasphaera genomosp. type_1 str. 28L] # 1 73 1 73 73 152 100.0 6e-36 MEKIKINTAYIQLDQFLKWAGVLPSGGEIRFFLAAHKISVNHMPCQVKRKKLYPNDIVTI TDVGEWQLVGEES >gi|290781780|gb|ADGP01000013.1| GENE 47 49624 - 50739 1041 371 aa, chain - ## HITS:1 COG:BS_dnaN KEGG:ns NR:ns ## COG: BS_dnaN COG0592 # Protein_GI_number: 16077070 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Bacillus subtilis # 1 369 1 376 378 147 29.0 3e-35 MKLTLTKEDLNKGLQTIAKIAQSKTNNLQSSNGFLLKALHNVIEIQANDYEMGIKTIVPG IIEEPGETFIANPYLIELIHKLPSDSVQLCKKDTDTKLLIIGGSVKFECATMNISDFNEV EIVESGYAQFTTNSIILKDLIDHTSFACSTNTERPIFMGTHLDVEKNRINMVATDTHRLA LKTYMSETPITTPIKVTIPSRLLMEISRNLPIDIPEPVTITAVRNYLAIRFSNVYIKTRL IEGEYPKYERVIPKDFQCTVTTDRAAFTSAVERVSLVVQNPQYNLIKFSFSQNQIKLMSR HPDYGVVEDLVACDMTGEDLTISFNSKYILDLLKHCHEEKIIINLRTQSPVLIKDKDDSS CVFVVTPMREK >gi|290781780|gb|ADGP01000013.1| GENE 48 50965 - 52458 1477 497 aa, chain - ## HITS:1 COG:BS_dnaA KEGG:ns NR:ns ## COG: BS_dnaA COG0593 # Protein_GI_number: 16077069 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Bacillus subtilis # 5 491 3 444 446 325 38.0 1e-88 MKEMDVTSLWIGMLAQLKQALPPTIYNTWIEPSLLPYSYENNQLILDTAQQFLRTYLSKN YLEDLKQAALAVTGTPTEIKLICSAKEPIPTEPAVAETIHIKDTGEPQSVAKKEPLQPLS LRDTANTIDSAPDLLIKEAKSLPITENTTPENQLDASYTFDNFIVGNSNRLAVAKAFAVA DAPGRKEFNPLYIYGASGLGKTHLMHAIGHRILEKFPHMRLRSITSEDFVNEFIKCIQDK NTESFRRQYRNIDVLLVDDIQFLGRGDKDSSKEEFFHTFNKLQQDKKQIVLTSDRPPLDI ERMEERLRSRFQSGSVAWIDPPDLETRTAILKTWAEKIHLSIDNESINYIAANVSENIRE LSGAFNNIQVLASAEKAPVTLSMTQRAIRYLVNNQEEKKYVSTDEIINTVCQFYSVTYKD IMGKKKTKDIALPRQIAMYLCRELTEHTYPHIGTVFGGRDHTTVMHACSKISQKMNENDH FKESIDKLKQHALHGDN >gi|290781780|gb|ADGP01000013.1| GENE 49 52713 - 52913 88 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRTENNLSTKCGYDVNKYFSIHILQQKKGRGQVYFKGGVRIKIKCKYGKIIDSNSLFEY NYAVMV >gi|290781780|gb|ADGP01000013.1| GENE 50 52955 - 53089 209 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371631|ref|ZP_03855114.1| LSU ribosomal protein L34P [Veillonella parvula DSM 2008] # 1 44 1 44 44 85 88 1e-15 MKQTYQPNTLWRKRTHGFRERMKTKGGRMVLKRRRLKGRKKLSA >gi|290781780|gb|ADGP01000013.1| GENE 51 53164 - 53520 362 118 aa, chain + ## HITS:1 COG:CAC3738 KEGG:ns NR:ns ## COG: CAC3738 COG0594 # Protein_GI_number: 15896969 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Clostridium acetobutylicum # 6 114 2 111 119 67 40.0 5e-12 MYELTKDSRLRKNKEYRLVYRYGKSYVNRYVVLYVMARSSKQCTRMGFVTGKKIGCAVER NRCRRLMKEVYRLHRQELGSGFDLVLIGRSPLKNINFAQAEYYILKVLRIAGILSKKR >gi|290781780|gb|ADGP01000013.1| GENE 52 53524 - 53733 112 69 aa, chain + ## HITS:1 COG:FN0003 KEGG:ns NR:ns ## COG: FN0003 COG0759 # Protein_GI_number: 19703355 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 69 1 69 82 97 60.0 5e-21 MKNIFIILIQFYQQWLSPLHRPCCRFYPTCSAYAIEALQKYGVVKGSYFTLRRIAKCHPF HPGGYDPVP >gi|290781780|gb|ADGP01000013.1| GENE 53 53790 - 54461 735 223 aa, chain + ## HITS:1 COG:HI1001 KEGG:ns NR:ns ## COG: HI1001 COG0706 # Protein_GI_number: 16272937 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Haemophilus influenzae # 17 221 336 533 541 155 40.0 5e-38 MFAHIISPLTYIMSTFLTYCYTFTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQG MQVIQPKIKELQKKYKGNQKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALRN YPYDPHFESFLWLPSLGSPDPTHVLPVLSALSTFLIQKQMTGAQVTEGEGQASQQKIMQI VMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQMIMFHGTDKGE >gi|290781780|gb|ADGP01000013.1| GENE 54 54464 - 55213 984 249 aa, chain + ## HITS:1 COG:CAC3735 KEGG:ns NR:ns ## COG: CAC3735 COG1847 # Protein_GI_number: 15896966 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Clostridium acetobutylicum # 1 245 1 204 209 134 35.0 1e-31 MRSVEGTGKTIADAVRSCLVKLGLIEDEVTVEVLEEPKSGFLGFGNKPARVRVTEKENIH TGLEVPETAAPSAIKTQKAQPVSISAAIPAVPSEETSFTVEEAATKAKNFLQTVLTRMGL SVMIEKMIKPDKIILHIHGKNLGVLIGKHGQTLDALQYLTNLTTNQNENERYFVMLDIEN YRHRREIALRKLALRLAARVRQTKEDVVLEPMNGYERKIIHLALQQEEHVQTDSDGQEPY RHVVIHYEA >gi|290781780|gb|ADGP01000013.1| GENE 55 55272 - 56651 1809 459 aa, chain + ## HITS:1 COG:CAC3734 KEGG:ns NR:ns ## COG: CAC3734 COG0486 # Protein_GI_number: 15896965 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 6 459 5 459 459 371 44.0 1e-102 MCSTNETIAAIVTPPGESGVGIIRISGDQAFSVGDVLFRSVSAVPLAQRRDKSVQYGHIT ERNGAVIDEVLVLIMKGPHSYTAEDVLEIQCHGGIKVIQKILTLVLEQGVRLARPGEFTE RAFVNGRIDLAQAEAVMDIIQAKSEAGVTRAVRQLEGKLSEVVNDMLQNLTTFITRLEVT VDYPEEDLEEIEVPDIAGSLQEMRDALEHMLGRARTGKMIRDGITVVINGLPNAGKSSLL NRLLEEDKAIVTEVPGTTRDVIEAWITLSGIPFCLVDTAGIRKTDDKVERIGVAKARSYM DTADIILLVLDGSHKLQEEEKALLQEIKDKTAWVILNKSDISSLMDKKEIEAYGIPVLSL SARTGKGIEALQKTLLRYVLSKGWDTGADVLLANVRHIEAARQAKAAMDRALHTLQAGLP IDLAIIDIREAWEMLGDITGQHVRADIVKEIFSRFCLGK >gi|290781780|gb|ADGP01000013.1| GENE 56 56668 - 58557 1899 629 aa, chain + ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 7 619 9 622 626 698 54.0 0 MFVVDTYDVIVIGAGHAGCEAALAAARLGVRTLICTLNLDNIALMPCNPAVGGPGKSHLV REIDALGGEMAINTDKTCIQMRMLNTGKGPAVYSLRAQSDKKVYQMTMTETLENQKNLDV KQLLITELLFEGNKVTGVVTELGEVYRAKAVILATGTYLKGKILIGDCSYAGGPMGQRSA EALSASLRQAGIRLMRFKTGTPARVDRRTLRTEEMEKQEGDTKGHAFSFLLPRQNRNTDC CWLTFTNEETHRIIRDNLHRAPTCNGTVQGIGPRYCPSIESKIQRFADKKRHQLFIEPEG KMTEEMYIQGMSTSLPVDVQYAFLKTIPGLEDVKIMRPAYAIEYDCLDPLQLDAALAVKE KEGLYSAGQANGTSGYEEAAAQGLIAGINAARFVLQQDPFILTRAEAYIGVLIDDLVTKG TQEPYRMMTSRSEYRLLLRQDNADLRLTQKGYDMGLVTPERYAVFQQKQQAIQEALKALK ECAVTPTAITQEKLRRIGTAPVRTGTTAYDLLRRNEVTYDTLQQVFLLPSVSAEVQEEME IMVKYEGYIERQAEQVEKMNRLEQKLLPSSIQYDSLTTVSAEGREKLARIRPRSIGQAGR ISGVSPADITALLIYLEQYKREGKDHVSN >gi|290781780|gb|ADGP01000013.1| GENE 57 58544 - 59257 792 237 aa, chain + ## HITS:1 COG:BS_gidB KEGG:ns NR:ns ## COG: BS_gidB COG0357 # Protein_GI_number: 16081152 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Bacillus subtilis # 14 237 14 237 239 189 41.0 3e-48 MFQTELYQACTALGLSIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSLS CYDEEIFKVRATVLDLGTGAGFPGIPLKIYRPDLQLTFFDSLKKRLQFISCVTDLLQIKQ TVCLHGRAEDLAHQDVYREQFDLVTSRAVARLSVLAEWALPYVKKGGYMIALKGARYEME LKAAERAVSLLGGTVYRVRKVQLGNLPDTRAVIYIRKTHDSPRQYPRKPKVASAHPL >gi|290781780|gb|ADGP01000013.1| GENE 58 59370 - 60026 736 218 aa, chain + ## HITS:1 COG:YPO0626 KEGG:ns NR:ns ## COG: YPO0626 COG2964 # Protein_GI_number: 16120952 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 10 192 1 177 196 118 35.0 9e-27 MKEVAEYIPLVAFLGKALGTHCEVVLHDVGNREHSIIAIANGHVSGRKIGGPLTDFTLKV LQKGTLRKDLYSVNYGGRGHSGKTFRSSSYFIRNREGRIIGILCLNYDVHTYFTARKILD RFILGDFSEEVSAREVTVPIQEHFHVDADSMMNSMIAKRLAPYNVSPSRLSVKERLQITG QLKEDGLFLLKGGITALAVHLSVSIPTIYRYLNRIRQE >gi|290781780|gb|ADGP01000013.1| GENE 59 60056 - 61351 1405 431 aa, chain + ## HITS:1 COG:STM3238 KEGG:ns NR:ns ## COG: STM3238 COG3681 # Protein_GI_number: 16766537 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 5 430 10 434 436 353 51.0 3e-97 MKETWEKMIGILKTDVVPATGCTEPVSLAFAAAVAARELGEPAETIQARVSANLMKNGMG VMVPGTGRPGLYIAAAVGALGGDANAGLQVLEGLTPEVVAAGAAMADAGRVTVEIAREVP YVLYAEALLIGKCHRVKVCIADNHTQVIRIEKDGTVVFQKKRDDGSGKEDKVKFLQSLSI QEIIDFAEQVPVQAIAFMKTAATMNETLSREGLHGEYGLRIGATLTKHQEKGLMGKDLQS MVVIRTVGASDARMGGAKLPAMTNSGSGNQGISATMPVVAVADYVHAEPEERLRAVTLSH MTAIYAHAFLPKLSALCAALTACVGAAAGMAWLLAAQHDRQVVIDAICSMTGDLPGMICD GAANSCSMKVASASAAAYKAVLLALEGIRVGGNDGLVAFDVDECIRNIGMLACQGMKETD PEILRIMLHKN >gi|290781780|gb|ADGP01000013.1| GENE 60 61522 - 61707 351 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968165|ref|ZP_06559710.1| ## NR: gi|290968165|ref|ZP_06559710.1| hypothetical protein HMPREF0889_1407 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1407 [Megasphaera genomosp. type_1 str. 28L] # 1 61 1 61 61 102 100.0 1e-20 MAEIDKAIELYEKTFDDSFPTIPVLRDKSKIEVMEIINKCISEGKDVYDMGYLSLDNDSI Y >gi|290781780|gb|ADGP01000013.1| GENE 61 61975 - 62934 1113 319 aa, chain + ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 1 317 2 316 318 216 35.0 5e-56 MERRKVVIIGAGHVGSHVALSLTQSGIADEIVLLDIEKEKAAAQAMDIDDSLRGSICGHS TVIRSGTYTDVEDAQILVTAFGRSRRPGENRLDLFDDSIRMANEIIGRLKQHSFQGIMIS VSNPADIVCEYIRRAMGWERQRCFGTGTSLETYRLLRVLSRHLSVSRTSIQAFCMGEHGN SGFIVWSHIFVNGKAFAHILQEDKKYKELDLAALQEEVKMAGDVEIDGKGCTEFGIANVV NMIITAVFHDQKLLWPCSVALNGEYGEKDVAAGVPCIIGRRGIERVVEMTLHEEEKDKFK HSCEVIRGFLVRARSLRKS >gi|290781780|gb|ADGP01000013.1| GENE 62 62962 - 63984 976 340 aa, chain + ## HITS:1 COG:BS_yqjB KEGG:ns NR:ns ## COG: BS_yqjB COG1376 # Protein_GI_number: 16079450 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 45 167 29 153 176 90 37.0 3e-18 MSAATYIKRLVGLLGVFAGFTFSMAGMPCAAEHIPAVQEQTGTRIAINLASRILTLYENG QKAAIYAVGVGTRRTPTPTGRFVIQNKAVNPTWVNPQNTQMRIGPGPNNPVGKRWMGFYG SYGIHGTNHPESVGKYVSHGCVRMKGNDIEGLFSRVTVGTPVMIYYDRIVIDRASDHTIS YYIYPDGYERQPLTAAQVQKALRGYGVEDFETPAAIAAKIKRADGKPTYVAKAYSLYIGS QKLTKRALGKQGHIYIPVFSVAQQLRVAAQWNDKQRQIETSYGTAPGIIKNDSVYADSRY MKILFHMQGNLTSRKQYVLQAIKTPSDTHSMPATTPASRE >gi|290781780|gb|ADGP01000013.1| GENE 63 64157 - 64639 371 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968168|ref|ZP_06559713.1| ## NR: gi|290968168|ref|ZP_06559713.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 160 1 160 160 286 100.0 4e-76 MKFIIKISMLLGCLFFLLGNGDAVQAHINNRQIAIGGMTPGCNAAYTEKIYGKPLQETVV QADTGETFIEYNYGGKLVVGFTAKNGQACYISCTANNLKTPAGIAAGMRADCLTRAYGKA DRYYTYKNKTLYIYNDRGGHTLSFDVKNFYIIRVNIRTLR >gi|290781780|gb|ADGP01000013.1| GENE 64 64731 - 65066 564 111 aa, chain + ## HITS:1 COG:no KEGG:Rumal_1565 NR:ns ## KEGG: Rumal_1565 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 1 109 110 218 238 98 46.0 6e-20 MIVAVPYDAGHIFQHFGKAKEFKFYTIQGSHIISSQISATAGAGHGAVIAFLQAHGTTEV ICGGIGAGAQQGLQAAHIVLHAGITMAADEAVTALLQGTLTDGIASCCDKH >gi|290781780|gb|ADGP01000013.1| GENE 65 65129 - 65413 381 94 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1314 NR:ns ## KEGG: Vpar_1314 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 91 1 91 92 80 46.0 2e-14 MKKITGFYLASCPYCRNAREAWKELVKEDPAYAAITVQWHEETQEPEAVAGHSYYYVPSL FLGTKKLYEAQPGQTYEEIKQHVKSAADYVLQHD >gi|290781780|gb|ADGP01000013.1| GENE 66 65410 - 66762 1457 450 aa, chain - ## HITS:1 COG:CAC1362 KEGG:ns NR:ns ## COG: CAC1362 COG0161 # Protein_GI_number: 15894641 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Clostridium acetobutylicum # 10 448 8 446 447 498 52.0 1e-140 MSPSDLLAFDQKHIWHPAQQMKDGEVFPPIIIDHAQDCYLYDVNNKEYIDIISSWWCNLL GHCHPEINAALKAQLDKVEHVIFANFSHRPALNVCQKLLPYLPQGLTRFQFCDNGSSAVE CALKLAFQYQLQTGRGQRKKYMCLDSAYHGETIGALSVGSMDLYTSLYKPLMMNNIHFDG LDCYRCPYGKTRTACNCECFESAEKAFSRYGKETVAVIVEPLLQGAAGMRMYPPAYLKKL RRLCNAYDVLLIDDEIAAGFGRTGTMFAIEQAGVTPDILCTSKGLTGGYLPMALTITTEK IYQAFYADYGEHKAFMHSHTYAGNPLACTAAATVLTIIKRDHILSHAATKGAYLHTCLKE RLGNHKNVGEIRHLGMINAIEIVKDRKTKEAFSPSQRIGWHIFRQAMQHGLVLRPIGDIL YFNPPLIMKEETLAAAVDICAAAIETVLGS >gi|290781780|gb|ADGP01000013.1| GENE 67 66766 - 67440 725 224 aa, chain - ## HITS:1 COG:CAC1361 KEGG:ns NR:ns ## COG: CAC1361 COG0132 # Protein_GI_number: 15894640 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Clostridium acetobutylicum # 3 203 2 206 240 147 39.0 2e-35 MSKGLFITGTGTDVGKTYVTALLIKTLRQAHYNAAYYKAAISGAPSVAAGDAGYVNRTAQ INEPENLLVPYTFTHAVSPHLASKLEGITIEKETILNGWKQVTARYPYVTVEGSGGIICP IRHDTTACYNLEDIIQWFHLPCIIVGTIGLGSINSFVLTAHYMQSKHLPVKGLIINRYHG GIMEDDNIAMITERTGLPVLAVVKEGDTSLSADPHKLAALYEGV >gi|290781780|gb|ADGP01000013.1| GENE 68 67457 - 68026 212 189 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 11 181 3 175 190 86 35 4e-16 MNPAPVLSFHSRTRSLVFIAVFAALTAVGAFIRIPVPVCPFTLQLLFTTLAGLLLGRFRG GCAVGLYVLLGLAGLPVFTEGGGPAYIFQPTFGYLPGFILGTMVTGYIAEHLHAPTIKQL ILADISGLFFVYLCGMVYLYLITTVYMGQPMTLRSLFLYCFFLAVPGDICLCIIAAILAK KLKHHGFSI >gi|290781780|gb|ADGP01000013.1| GENE 69 68184 - 68630 550 148 aa, chain + ## HITS:1 COG:no KEGG:CLJU_c11350 NR:ns ## KEGG: CLJU_c11350 # Name: not_defined # Def: putative positive regulator of sigma E activity # Organism: C.ljungdahlii # Pathway: not_defined # 2 137 3 137 138 88 34.0 1e-16 MRIGEGVVEEILADGLARVRVDKDSLYVACGACFGAEHVIITAHNSIGAKQGENVRYEVT EAHLIFGSFLCFILPLIFIGIGAVIAYFLGITYGGSMVHWIMAGSLAGLIITFLFWKIAD RSISGMVDARPTISEIIQKMDAEEACCN >gi|290781780|gb|ADGP01000013.1| GENE 70 69091 - 69240 243 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121534735|ref|ZP_01666556.1| ribosomal protein L33 [Thermosinus carboxydivorans Nor1] # 1 49 4 52 52 98 87 1e-19 MRTAVTLACTECKQRNYQTNKNKKNNPDRLELKKYCPFCKKETLHKETK >gi|290781780|gb|ADGP01000013.1| GENE 71 69278 - 69508 261 76 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1511 NR:ns ## KEGG: Vpar_1511 # Name: not_defined # Def: preprotein translocase, SecE subunit # Organism: V.parvula # Pathway: Protein export [PATH:vpr03060]; Bacterial secretion system [PATH:vpr03070] # 5 76 2 73 73 62 43.0 7e-09 MAISAKKTAQKNKKKPGKSFFQGVKAEMKRVIWPTKRELISYIIMVIVTTIIVMAVMGIS DGVFSRIFNLLRIIVG >gi|290781780|gb|ADGP01000013.1| GENE 72 69524 - 70063 691 179 aa, chain + ## HITS:1 COG:BH0118 KEGG:ns NR:ns ## COG: BH0118 COG0250 # Protein_GI_number: 15612681 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Bacillus halodurans # 7 176 5 177 178 186 56.0 1e-47 MENGMKWYVIHTYSGYENKVMATLERKVKSMGLENVINRILVPMEDEVDMKDGKKRTVKR KIFPGYVLVEMEVNDRSWYVVRNTPGVTGFVGSATKPTPLTEEEVKSILKSQGVDAEPKI QIAVDIGEQVRITSGPFENFIATITEINKEKGTLKGLIDMFGRETSVEVDYSQIEKSLE >gi|290781780|gb|ADGP01000013.1| GENE 73 70155 - 70580 588 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238927915|ref|ZP_04659675.1| ribosomal protein L11 [Selenomonas flueggei ATCC 43531] # 1 141 1 141 141 231 83 1e-59 MAKKVAKMVKLQCEAGKATPAPPIGPALGQAGVNIMAFVKEFNERTAKQAGFIIPVEITV YDDRSFTFITKTPPAAVLLKKAAGIEKASGEPNKKKVAKVGRDKVREIATTKMPDLNAND VEQAMKMIEGTARSMGIEIVD >gi|290781780|gb|ADGP01000013.1| GENE 74 70639 - 71355 857 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372934|ref|ZP_03856411.1| LSU ribosomal protein L1P [Veillonella parvula DSM 2008] # 1 236 1 236 236 334 69 7e-91 MAKVGKKYAEAVKLFEPDKQYDPADAIDILKKMDTAKFDETVELAVNLNVDPKYADQQVR GALVLPHGVGKTKTVLVFAQGDKEKEAQEAGADFVGGDDLIEKIKGGWLAFDVAVATPNM MGKVGRLGKILGPKGLMPNPKIGTVTMDVAKAVSESKAGKVEYRTDKAGNIHSPIGKKSF EANKLVENLTTLVDTLIKVKPAGAKGQYIKSITVSSTMSPGIRINPFSVKGVVKAEEN >gi|290781780|gb|ADGP01000013.1| GENE 75 71530 - 72087 534 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121534749|ref|ZP_01666570.1| ribosomal protein L10 [Thermosinus carboxydivorans Nor1] # 9 179 3 173 176 210 61 2e-53 MSTYAKHEVAPEKAAVVADMKEKLQSAKGAVLVGFTGLTVAEVTKLRRKFLAGNVEYKVI KNTLTRIAATEVGYEGLSEFLEGPTAIAYSTEDAVAPAKILKEFIKETKTEAITVKVGIA DGQVIDAEAVNALANLPSREELLAKIVGSMQAPISGMVNVLQGNIRNAVYVLEAVRAKKA EQESA >gi|290781780|gb|ADGP01000013.1| GENE 76 72135 - 72503 482 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|28394175|dbj|BAC57018.1| 50S ribosomal protein L7/L12 [Selenomonas ruminantium] # 1 122 1 122 122 190 84 2e-47 MTKEEIMQAIENMTVLELSELVKDMEEKFGVSAAAPVAVAAAPAGAAAAGEEKTEFDVVL TAAGDKKINVIKVVREATGLGLKEAKALVDGAPKAVKEGAAKADAEALKAKLEEAGATVE LK >gi|290781780|gb|ADGP01000013.1| GENE 77 72637 - 73164 762 175 aa, chain + ## HITS:1 COG:FN1223 KEGG:ns NR:ns ## COG: FN1223 COG0778 # Protein_GI_number: 19704558 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 174 1 174 175 199 52.0 3e-51 MNEVLQAMKERRSIRRFKPDPVDPALIEQVIEAGLYAASSRNRQATKIIAVTSPQVCRYF REENRRIWGGDKEGDPFYGAPVILIVIADKKFPNGVYDGSLVMGNLMLAAHSLGLGSCWI HRAKEEFELPAGRKFLQDLHIEGDYEGIGHCALGYMDGELPPPLKRKENRVYYVK Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:31:30 2011 Seq name: gi|290781761|gb|ADGP01000014.1| Megasphaera genomosp. type_1 str. 28L contig00055, whole genome shotgun sequence Length of sequence - 32210 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 5, operones - 4 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 14917 21826 ## COG5295 Autotransporter adhesin + Term 14930 - 14975 12.1 + Prom 14994 - 15053 8.0 2 2 Op 1 1/0.000 + CDS 15166 - 16440 1705 ## COG0536 Predicted GTPase 3 2 Op 2 . + CDS 16458 - 16751 386 ## COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 4 2 Op 3 22/0.000 + CDS 16764 - 17894 1216 ## COG0263 Glutamate 5-kinase 5 2 Op 4 . + CDS 17909 - 19156 1390 ## COG0014 Gamma-glutamyl phosphate reductase 6 2 Op 5 . + CDS 19153 - 19314 111 ## gi|290968189|ref|ZP_06559733.1| hypothetical protein HMPREF0889_1531 7 2 Op 6 9/0.000 + CDS 19256 - 19924 684 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 8 2 Op 7 3/0.000 + CDS 19900 - 20505 639 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 9 2 Op 8 3/0.000 + CDS 20502 - 21656 911 ## COG1316 Transcriptional regulator 10 2 Op 9 1/0.000 + CDS 21671 - 22048 449 ## COG0799 Uncharacterized homolog of plant Iojap protein 11 2 Op 10 . + CDS 22051 - 22929 476 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains + Term 22958 - 22999 7.1 + Prom 23015 - 23074 8.5 12 3 Op 1 11/0.000 + CDS 23102 - 24643 1513 ## COG0248 Exopolyphosphatase 13 3 Op 2 . + CDS 24647 - 26743 2164 ## COG0855 Polyphosphate kinase + Term 26785 - 26827 8.1 - Term 26764 - 26824 17.5 14 4 Op 1 . - CDS 26931 - 28193 1650 ## COG0786 Na+/glutamate symporter - Prom 28255 - 28314 6.4 15 4 Op 2 . - CDS 28330 - 29529 897 ## COG1323 Predicted nucleotidyltransferase - Prom 29619 - 29678 6.1 + Prom 29635 - 29694 6.1 16 5 Op 1 . + CDS 29724 - 30260 519 ## gi|290968199|ref|ZP_06559743.1| putative lipoprotein 17 5 Op 2 . + CDS 30290 - 31489 1588 ## COG0282 Acetate kinase 18 5 Op 3 . + CDS 31580 - 32210 520 ## Acfer_1469 haloacid dehalogenase domain protein hydrolase Predicted protein(s) >gi|290781761|gb|ADGP01000014.1| GENE 1 2 - 14917 21826 4971 aa, chain + ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 3559 4788 1245 2343 2712 174 27.0 5e-42 TVQAALKPVSDKADQNATNIATLQKGFTLKDSGTGSTTVKAESTVTVTGDTYVKATVNDK GLTLGLNEDALNSQINTQITSNSTVTGKMSAWKLKATGGDTAEQEIKDGNTVTFDAETAK GLTVTRDKNTIKYGIDADKLASTVTNTINNNTNATAITNISAKFSISDKDDTKKQTITLS KNATPNIQFLGDTNLTSKVDGTKVTYGLNTALTNMNSITFAAPTAPAGETSKALTINGTA GTITGLTNTTWNADAITSGRAATEDQLKALSETVSGNASSSTDYKLVKAGTTKTTDGKGV YTPDTEGKIDLLVQDKNHKGHIETITISDVAKRSELVEVQKKLEEGFTVGKDGTIGVNGA DGKDGIGINGKDGGSITIHGTDGKDGQNGVTIRGVDGKNGEKGEKGVDGTTTINRIVTVD PNGTTHQVATLDDGLKFKGDMGDAAPIKLNNQVNIVGGETVAANLSDGNIGVDTTKEGNN AKLTVKLAKNLKNLESATFTKTEKGVTTTSVINDKGLTIGSGNTAVALTKDGLTMGGQEI TNVKESTIATNAATVGQINKAKEDLKTEIDKKVDKTTYTDGMATKADANGANVTNPDTWA EKLGTGTISDTDGKLVTGKTVQAALKPVSDKADKNATNIATLQKGFTLTDGNTPTAGSKT VTAESVVTVTGDDYIKTKVDTSGLKLTMDETKLNSQINTQITSNSTVTGKMSAWKLKATG VNGEGTVNNTDNTVTFDAEKDKGLTVSRDGNTIKYGIDADKLASTVTNSINNTTNATAIT NISAKFSISDKDDTKNQTITLSKNAIPNIQFLGDTNLTSKVDGTKVTYGLNAALTNMNSI TFAAPTAPAGETSKALTVDGKKGTITGLTNTTWNADAITSGRAATEDQLKALSDTVSGNA SSSTDYQLVKAGTTKIKDGTEAYKADKDGNIDLLVQDKKHPDSIKTITISDVAKQTELVK VQKKLEEGFTVGEAGEDGKPGKDGTIGVNGKDGSSVTINGKDGSIGLNGTNGKDGLSIRG EKGDEGKPGVDGKTTIKRIVITDPDGKNPHSVATLDDGLKFKGDIGDAAPIKLNNQVNIV GGETVAANLSDGNIGVDTTKEGNNAKLTVKLAKKLKNLESATFTKTVTTPNGDVTTVTTI NDNGVTIGNNTDPTKNVSLTKDGLNMAEQEIKNVKESTTATNAATVGQVNAAKKEAMDTL TAGFDVKAGTVTGNVSLKAGEKPTVEFLSDGNGLSVDLTTDTAKHTQKITYRLSDTPVFG EKAVPGEAGKPGKDGKVEVIGKDGSAVVINGKDGSIGLNGTNGQNGLSIRGEKGDEGKPG VDGTTTIKRIVITDPNGQNPHSVATLDDGLKFAGNVGNFYSKLNETVEIIGGEKNVEQLT DENIGVVAEKEKDKNGKLDIKLAKNLRKLESAEFTKTVTTPNGDVTTVTTINDNGLTIGN NTDSTKNVSLTKDGLNMAEQEIKNVKESTTATNAATVGQVNAAKQAAMDILTAGFDVKAG NVKETVSLKADEKPTVEFLSDGNGLSVDLLTDAATHTQKITYHLSDTPVFGEKAVPGEAG KPGKDGKVEVIGKDGSAVVINGKDGSIGLNGKDGKDGIGINGKDGGSITIHGTDGKDGQN GLTIRGVDGKNGEKGEKGVDGTTTINRIVTVDPNGTTHQLATLDDGLKFAGNVGNFYSKL NETVEIVGGVTVGENEKAEDKLTDENIGVVANKEAGKNGKLDIKLAKNLKKLESAEFTKT VTTPEGDVTTVTTINDKGLTIGTGDKALAITENSIAFGKTGGTITGLTNKTWDGKTIVTG RAATEDQLKQVADTVNSNATAATDFRLVKAGTTPTTDGKGVYTPGTDGKIDLLVQDKNHK GSIDKITISDVAKQTELVEVQKKLEEGFTVGAAGEAGKPGKDGTIGVKGADGSSVVINGK DGSIGMKGKDGANGKLFLQKVPGLDGADGETRMVYEADGKENVVATKDDGFFVEGDMGDK SIKQKLNTLLRVRGGNKEEKELTENNIGVVGSTDRGLDIKLAKNLKNLESATFTKTENGV TTTSVINDKGLTIGSGDSAVALTKDGLNMGNHEITNVKESTTATNAATVGQVEKAKTELT TAINNKADYALVKADGQDGAYKVTNGKITLKVKNKTKPDEAAKEVVIDDVASKSSLDTLK EEMKKNIQVGGKGDDGADGVDGTIGVNGKDGKPGIGINGKDGGSITIHGTNGADGQDGQN GLTIRGVDGKKGEKGEKGVDGTTTINRIVTVDPNGTTHQVATLDDGLKFAGNVGNFYSKL NETVEIVGGEKNVEQLTDENIGVVAKKEDGKNGKLDIKLAKNLRKLESAEFTKTFQNGGK VETETTIINEKGILTKDKDDNISFTSPTETIISDAQSKHYINLNKSGITIHDEGDGTPGS KKETTSLSSGSLTGLSNTTWDSKNITSGRAATEDQLQKVSEAVDANAKATTDFRLVASTD TKGYTPDTSGTVTLDVKDKNHENKDAYQVTISNVASKSDVDKMLKEGFTVGEVGKPGKDG EDGKVEVVGKDGSAVVINGKDGSIGMKGKDGADGKLFLQKVPGLDGADGETRMVYEADGK ENVVATKDDGFFVEGDMGDKSIRQKLNTLLRIRGGNTDEKELTENNIGVVGSTDRGLDIK LAKNLKKLESAEFTKTVTTPNGDVTTVTTINDNGLTIGNNTDTTKNVSLTKDGLNMAEQE IKNVKESTTATNAATVGQVNAAKQAAMDILTAGFDVKAGTVTGNVSLKANEKPTVEFLSA GNGLSVDLTTDAATHTQKITYRLSDTPVFGEKAVPGEAGKPGKDGKVEVIGKDGSAVVIN GKDGSIGLNGTNGQDGLSIRGEKGTEGKPGVDGTTTIKRIVITDPNGQNPHSVATLDDGL KFAGNVGNFYSKLNETVEIVGGVTVGENEKAEDKLTDENIGVVAKKEAGKNGKLDIKLAK DLKKLSSAEFIKNVTTPQGNVIKTTTVIDGDSIIIRNGSVNAVTITGNHIAFGQPGGTIT GLTNTTWPQDTTKNFDVSQAATQGQLKILDDKLNKNEQDRTDFRLVASTDTKGYTPDKSG TVTLDVKDKNHEDKDAYKVTISDVARKSDVDKMLNEGFTVGEAGKPGKDGTDGKVEVIGK DGSAVVINGKDGSIGLKGKDGKDGIGINGKDGGSITIHGTNGTDGQDGQNGLTIRGVDGK NGEKGEKGVDGKDINRIVTVDPNGTKHQLATLDDGLKFAGNVGNFYSKLNETVEIVGGEK NVEQLTDENIGVVAEKEKDKNGKLDIKLAKNLRKLESAEFTKTVQNGGKVETETTIINEK GILTKDKDDNISFTSPTETIISDAQSKHYITLNKSGITINDEGDGTPGSTKPATSLSSGS LTGLSNTIWDSKNITSGRAATEDQLKQVSDTVDENAKAATDFRLVKAGTTKDADGTKDYT VSENGKITLTVQDKNHKDQLQEIGITDVARKSDVDKMLKEGFTVGEVGEAGKPGKDGTDG KVEVVGKDGSAVVINGKDGSIGMKGKDGANGKLFLQKVPGLDGADGETRMVYEADGKENV VATKDDGFFVEGDMGDKSIKQKLNTLLRVRGGNKEEKELTENNIGVVGSMDRGLDIKLAK NLKNLESATFTKTVTTPNGDVTTVTTINDKGMTIGTGDKALAITENSIAFGKTGGTITGL TNTTWDGKTIVTGRAATEDQLKQVSDTVDANAKAATDFRLVKAGTTKDADGTKDYTVSEN GKITLTVQDKNHKDQLQEIGITDVARKSDVDKMLKEGFTVGEAGKPGKDGTDGKVEVVGK DGSAVVINGKDGSIGLNGTNGQNGLSIRGEKGDEGKPGVDGTTTIKRIVITDPDGKNPHS VATLDDGLKFAGNVGNFYSKLNETVEIVGGVTVGKNEKAEDKLTDENIGVVATKEEGKNG KLDIKLAKDLKKLSSAEFIKNVTTPQGNVIKTTTVIDGDSIIIRNGSVNAVTITGNRIAF GQPGGTITGLTNTTWPKDTTKNFDAGQAATQGQLKILDDKVNQNEQNRTDFRLVKAGTTK DADGTKDYTVSENGKITLTVQDMHHKDQLQEIGITDVARKSDVDKMLSEGFTVGEAGKTG KDGKVEVIGKDGSAVVINGKDGSIGLNGKDGKDGIGINGKDGGSITIHGTNGADGKDGEN GVTIRGVDGKNGEKGEKGVDGKDINRIVTVDPNRTKHQVATLDDGLQFAGDSGTAIAKKL NETVTISGGVTDEKQLTDKNIGVVAKDGKLNIKLAKNLDGLESATFTKTVEKNGKKETTS TVINDLGTTVTDKDGNTNQTTAGGTVIQNKDGSEKIEIKKDGITIMDAGDGTLSNPGKTI SLTKDGFDNGGNKITHIADGTADSDAATVGQVNAAKKEVMNTLTAGFDVKAGGVTGNISL QANAKPTVEFLSSGNGLSVDLLTDTATHTQKITYRLSDTPVFGEKAVPGEAGKPGKDGKV EVIGKDGSAVVINGKDGSIGLNGTNGQNGLSIRGEKGDEGKPGVDGTTIKRLVITDPDGK NPHAVATLDDGLKFAGDSGTAIAKKLNETVTISGGVTDETKLSDNNIGVVAKDGKLNVKL AKNLTGLESATFTKTVEKNGKKETTSTVINDLGTTVTDKDGNTNQMTAGGITITTKQKDG KENTVSLTKDGLNNGGKKIVQVADGDLSDKSQDAVTGKQLYATNQRLEKTDKALQNGIDF KVGKDTYTAKLSGDKAPELSFSGGDNITANLKDQTIQYSLNKDINVNSVTAGTTSMNGEG IKIKGQGQGTADISLTAQGLNNGGKKIRAVADGLIAPNSTEAVTGRQLYQTNAGIVRISD DVMRVGAGAAALAALHTQDFDPADKWDFAAGYGNYKSANALSLGAFYRPNERTTFSVGSA FGSGANFINAGVTIKLGDGKYIGTSKAALVKAVEDQQQEIDRQKQKLQSQSAEIQNLQQR DTARTAEMEALKAKDAQRDAELKALKAKDAQRDAQIQKMMQLLVQLQKSKK >gi|290781761|gb|ADGP01000014.1| GENE 2 15166 - 16440 1705 424 aa, chain + ## HITS:1 COG:lin1572 KEGG:ns NR:ns ## COG: lin1572 COG0536 # Protein_GI_number: 16800640 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Listeria innocua # 1 422 1 427 429 404 52.0 1e-112 MFIDRARIFVQSGKGGDGMSSFRHEKFVPKGGPNGGDGGQGGDVVLVADRNVNTLVDFRY RRLFKAKPGGNGQSSNKYGRDAAALEITVPLGTVVREEESDRVIADLSRDGQRAVVAKGG RGGRGNWHFRTSANRTPTFAEKGEPGEERWLKMELKVLADVGLLGYPSVGKSSILRKVSA AQPEVAAYHFTTLNPILGVVDLSEHRSFVMADIPGLIDGAAEGVGLGHDFLRHIERTKIL IHVLDVSGMEGRDPLEDYEKINAELAKYSEKLIKKKQLIAANKVDLLAADREMLTRVESY MAARGQEVFPICALTGEGLEALLERVWTLVETYEEEPEENTEEVVYRAKDTTDFVISRAD DGAFVITGARIENLVAMTNFDDEQSLRRFQRIWRYMELDKMLREKGIHEGDTVRIYEMEF EYQV >gi|290781761|gb|ADGP01000014.1| GENE 3 16458 - 16751 386 97 aa, chain + ## HITS:1 COG:BH1325 KEGG:ns NR:ns ## COG: BH1325 COG1534 # Protein_GI_number: 15613888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted RNA-binding protein containing KH domain, possibly ribosomal protein # Organism: Bacillus halodurans # 1 89 2 90 96 62 39.0 2e-10 MTGKDKKMLKAMGSQLPAVVQIGKEGLSAPVIDSARAVLTARELIKAHVLPNAGGDTEEI LHELSTMLGAELIQVIGRYGILFKKKKDKSHFAYIGK >gi|290781761|gb|ADGP01000014.1| GENE 4 16764 - 17894 1216 376 aa, chain + ## HITS:1 COG:DR1827 KEGG:ns NR:ns ## COG: DR1827 COG0263 # Protein_GI_number: 15806827 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Deinococcus radiodurans # 13 375 2 363 363 319 47.0 5e-87 MDEARKALKEKKRIVVKVGSSTLTYATGKLNYHRLERLAREISDLANQGKEMILVSSGAV SAGMGPLGLTARPRTIREKQAVAAVGQGVLMHMYETMFREYGQTVGQVLLTRMDAQERSK FMNSRNTLLTMIAMGVIPIINENDVVAIDEFKIGDNDTLSAMVSTIIDADLLIILSDVDG LYTANPQTHAEARIIPVVETIDRHCYDIAGGAGTERGTGGMYTKIQAAALATSAHIDMVI ASGEEDGVLRRICCGESVGTLFKAKDAALHSKKRWLLSGSKAAGTITVDQGCREAIVSHG SSLLPVGITAVKGAFHEGDIVSLVYDGIVIAKGIVNYDAADIQAISGHKSEEIRVILGHD GAYEEVIHRDNLVVMQ >gi|290781761|gb|ADGP01000014.1| GENE 5 17909 - 19156 1390 415 aa, chain + ## HITS:1 COG:lin1227 KEGG:ns NR:ns ## COG: lin1227 COG0014 # Protein_GI_number: 16800296 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Listeria innocua # 3 414 2 414 415 419 52.0 1e-117 MESEAVQKARLAQRAARVLAQIDTPQKNKALAAIADALEQQVDYLLTANRKDMEAAKIRG ISEAMLDRLTLTPARIRAMAEGVRQVVQLQDPVGKIVSSWETDGHLKITKVTVPLGVIAI IFESRPNVTVDAAVLCLKSGNACVLRGGSEAIHSNTALVRVIRQGLRAAALPEDGVALLE NTDRALVKELLTLRKYVDLAIPRGGAGLIQMVVQTATVPCIETGSGICHVYVDKAADLDM AVRIAENAKVSRPSTCNAMETLLVHKDILQPFLKKLLPVLQKDGVTIRGDREVQACGVME AATEQDWRTEYNALILSVKTVPSLEAALAHIQQYGTHHSEAIVTTDKKTADLFLQRVDAA AVYVNASTRFTDGFEFGFGAEIGISTQKLHVRGPMGLEALVSYKYRIQGQGQIRL >gi|290781761|gb|ADGP01000014.1| GENE 6 19153 - 19314 111 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968189|ref|ZP_06559733.1| ## NR: gi|290968189|ref|ZP_06559733.1| hypothetical protein HMPREF0889_1531 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1531 [Megasphaera genomosp. type_1 str. 28L] # 1 53 1 53 53 80 100.0 3e-14 MKRLLFGYMRTWKQYCQAPKTKYEWRYYKILFVMYAAGAAILLGGIYFYRGGH >gi|290781761|gb|ADGP01000014.1| GENE 7 19256 - 19924 684 222 aa, chain + ## HITS:1 COG:CAC1262 KEGG:ns NR:ns ## COG: CAC1262 COG1057 # Protein_GI_number: 15894544 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Clostridium acetobutylicum # 22 214 5 199 200 130 39.0 2e-30 MRQERQFFWEVSIFIVAAINIGIMGGTFNPIHYGHLMIAEEARQQLQLAKVIFMPSYRTP HKEMVGPTARQRWEMTRLATADNPYFYVSDWEIRRRGASYTIETLRYFRDKWGEQVTLFF ISGTDTVHDLIHWKKPYEILSACYVVGAVRPDGSENITASVQQFGALGKKIIKLPVPTMA ISSTLIRKRLQEGQSIRYLVPLTVQKYIEKNGVYACLEKQIK >gi|290781761|gb|ADGP01000014.1| GENE 8 19900 - 20505 639 201 aa, chain + ## HITS:1 COG:CAC1263 KEGG:ns NR:ns ## COG: CAC1263 COG1713 # Protein_GI_number: 15894545 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Clostridium acetobutylicum # 9 191 6 187 189 134 40.0 9e-32 MFGETDKIKIRQALQADLTPHRYRHVLGVAAAACRLATRYGYDKDRAEVAGLLHDAAKQI PLTEMQALARASFGNSLASEIMASDNLLHGYAAVTIARERFGIVDEEVLAALAHHTTGAL QMGVLEKIIFLADYIEVNRDFEGVQKLRMLAEKDLDTAVLAGYDSTLQHLITAQQHIYVG TVANRNALLQRMQERKRRAEV >gi|290781761|gb|ADGP01000014.1| GENE 9 20502 - 21656 911 384 aa, chain + ## HITS:1 COG:slr0883 KEGG:ns NR:ns ## COG: slr0883 COG1316 # Protein_GI_number: 16330199 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 53 371 81 403 481 75 22.0 2e-13 MKKDRKTERRPLHPKVIGRRRRFKRWGYIIIFLCICIGLLTAARSHYQTTRAQQLQTEMA AVQNGSSKSFSQMSPDMPLYMLLVGVDKEKPQQANFIAVAAINTAKQHVDFIMLPDTTKV DSRQDDKSEYLRDVYGEGGLPLLQAVVEDIFHIPIPFYAVFTEDTFSRLLEMNNGFSMYV EKPMYHGDKNGHTEFNIFQGYQRLNGQEAVGYMRYLDADGEIARVQRQERLVKLFYQTRR QHWGWTNMLFMYRFWNHVQSNIKTKDMAKLAYTFSHAGSTQIKFYILPGEADTGATGYWI FDPVEVQKLIGTTNNAIASPPSTTPSETMNTGEDTTTGDAPASSSSSGKEAVTPALSQHQ EKKKQHVRIKNSKKNNSPSKQRGI >gi|290781761|gb|ADGP01000014.1| GENE 10 21671 - 22048 449 125 aa, chain + ## HITS:1 COG:BH1328 KEGG:ns NR:ns ## COG: BH1328 COG0799 # Protein_GI_number: 15613891 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Bacillus halodurans # 18 124 8 114 117 90 38.0 4e-19 MPIIKKETPAVQPCTVYEIAAQAADEKKAWNITILNIEESSLMADYFVICSVRNERMARS VADAVEEALALQGHSVTHKEGYHTGKWILLDAGIVVIHIFVENERQYYGIEDLWGDAKRI PFAGE >gi|290781761|gb|ADGP01000014.1| GENE 11 22051 - 22929 476 292 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 31 288 22 284 285 187 36 6e-47 MASLLQENSLATLKVLRAGEAGVFLDGQTGNTNDDILLHKNQQTRPVTVGETVDVFLYHD PAGRLTASMRLPRIKIGQIGYAPVINTTRFGAFVEVGTERGIFMPFAEMKGRPKEGEYVW VKLYEDKSHRLAVSMEVEDEMRRASRAAADAVIGDWVEGAVYNITDQGAYLMTRERWIAF LHRSEFTGPILLGQFLKGRIVHIRDDGRINISLRHVKEEALDPDGEKIIVFLQQRHGKMP YGDKTPPAVIKAKFGLSKAAFKRALGHLMKEHKVYQEDGWTYLTAEQDTVSL >gi|290781761|gb|ADGP01000014.1| GENE 12 23102 - 24643 1513 513 aa, chain + ## HITS:1 COG:sll1546 KEGG:ns NR:ns ## COG: sll1546 COG0248 # Protein_GI_number: 16332241 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Synechocystis # 8 504 13 523 540 119 23.0 1e-26 MKGHKKRMVGIIHIGTVNMTLKIISYTSLDAMETIESVSQEIRYGSDVFISHHVTFASLQ EICRILSGFKQLLRDYAVTDVRVISTTAIRKADNLLNVLDQIYIRTGFSVEVIPMTKEIY YKFFGLYYRISTGNFTFSEYPAVLLDITSGGVGLTCWQDRDLLFQQNVPIGSLQLLSHFT ERQRNESEFPEVIREYIYGTLSSLWPRVRYYKSTYIILSGRAAMLIARMLGYTDTKRSIR ITPQELRDFVGAFHGVTSFKLQKRYGLSEHLANIIMSTLVLYDELLRYISIAHIVIMDTT FTAGYSLYYVAEATKHPYLQQQQRLLLTLTRHIADKYVPDPAHSQRVERFCRQIFDTVYA KNGMTERHGYILQMAAVLHEIGKFINIRKHPQCTRQLVRHTDMFGLSEAEQEILSYVVYY GVGTGKKELPAIPSLPPVQQIAADKLIAVFRLADALDKSHLGKILTLQVVPKGKELQFHY TAEEDIPLERWAFKQAAVRFAETFGVSPYLQKG >gi|290781761|gb|ADGP01000014.1| GENE 13 24647 - 26743 2164 698 aa, chain + ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 9 674 19 689 705 640 50.0 0 MSKYEAHEYFLNRECTWLKFNERVLREAVVPSNPLLEQLNFIAIAASNLDEFFMIRVAGV KHLIESGIKHIDIAGLTPRQQFAAIQAMAHELVHTQYRYCRSILTRLRDKGLEFVKVQDL TAEQNRWLEDFFTREIYPVVTPMAVDSSHPFPFLASLNLNLAVLLRKRDGAVKTAILPVP SPVIRRIVKVPGTKNPKQYLFLEDILAAYAERFFLGCDILEAVPFRVTRDADLDIDEDVE DLLAEVEKSLKKRKKGAAVRLEISQSASRLIKEFLRKELQLEERDMYMIPGPLDCQVFFS FLSIESDETLRYVPFRPQPSFELAELGEPDLWKAVSARDIMVHHPYEKFETIEDFIHLAA MDPDVLAIKQTLYRVSSKSPIIAALATAAENGKQVTVLMEVKARFDEENNINMARKLEEA GCHVIYGIVGLKTHSKITLIVRREEDGIKRYVHLATGNYNGKTARIYTDIGILTANPLIG ADASAFFNFLSGYSDPPEWNKLAVAPLNLRERIYEEIDQEIAWAKAGKKAVIQAKMNSLL DKSVIAKLYEASVAGVTIQLIIRGICVLRPGVKGISENIEVRSIVGRFLEHSRLFYFYNN GKEDVFISSADWMPRNLNERVELMVPIEYAPHKKRIKDILSLYLRDNTKAYHMEADGSYQ YVSGKPADETVQAQEYLQHEAEQRRRRLHQEKEGPLYR >gi|290781761|gb|ADGP01000014.1| GENE 14 26931 - 28193 1650 420 aa, chain - ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 5 415 6 390 399 291 40.0 2e-78 MSVGLNMFQSLGAIIAVYYVGVFLCEKIAVLRQYCIPAPVVGGLLFAIVNCVLYTQGIWT FKVDLTMQQLCMMLFFTSVGYTASVSLIRRGGIAVLKMAAITVFLIILQNLISLSLTHIF HLGPLMGLATGSIPMIGGHATAAAFGPVLENMGLANGTTIAVAAATFGLVSGGIIGGPVG ETLVKKFHLHSREPNERLDPEYLQPEREMLEAIVDHREDAQHALEHECRCGQSINNHRFM HGMAHLGLAMGLGTLISKGFVALGLIFPAYIGSMLMAAIIRNIADFTHVYKVYQRESEVL GNIGLTIFLTCVLMGLQLWQLYALALPMMAILAIQTLCIAGFAYFLVYRIMGKNYEAAVM ASGVCGFGLGATPNAIANMTAMTELFGPAPAAFFVIPLIGSLIIDPVNASVLMFFLNLFR >gi|290781761|gb|ADGP01000014.1| GENE 15 28330 - 29529 897 399 aa, chain - ## HITS:1 COG:BS_ylbM KEGG:ns NR:ns ## COG: BS_ylbM COG1323 # Protein_GI_number: 16078570 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Bacillus subtilis # 1 374 1 373 415 181 31.0 2e-45 MDLIGIIAEFNPFHTGHAALLQQIRRHYGPTVPVVIILSGSFVQRGEPALFDKWQRTSWA LRAGADIVVELPTVYALSAAPFFAAGAVRLAAAVGCTHLACGTEIGTAEDFMHLAELRAN VEHFPLHRTSQTYGTYMTRQLQPHLSPSQQALLQAPNALLAGEYALAIQRYAPHIKLHTF CRKSRHDQQTPTNEFASASFLRSALPTRGLQDVKKYIPPAYQEEMQHLIRSGQYTDYNRY GDFVLYAGRRYTAARLQHVPAFTEGLEHRWIRCVTQAATWDNALQALKTKRYSYRRLCRM GAYVALQATRELFIQVYEEGPSYIRLLGNTQRGRTYLKEKNCTLPCIYRPAPFMKQGEPL LRRCLQFDHAATDLQYLSFHNPQFRQGLADFYHKPCILP >gi|290781761|gb|ADGP01000014.1| GENE 16 29724 - 30260 519 178 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968199|ref|ZP_06559743.1| ## NR: gi|290968199|ref|ZP_06559743.1| putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] # 1 178 1 178 178 357 100.0 2e-97 MKCKSWTTAAVIVATALVLSGCGRQTVLETYSFGQVQLKVGNSELYMASPFDLGRVKRQD DPGIIYGGEDRHLTVIALAEPANTTTVEQSAADLITMLQQTAEISDLQTKSKPTMIGNRP ALEVTCQYNKLTDGQAIGIIMRSLFFEDKGQIWHIQYAYRSDDVLGKAAIERVFGHIQ >gi|290781761|gb|ADGP01000014.1| GENE 17 30290 - 31489 1588 399 aa, chain + ## HITS:1 COG:MA3606 KEGG:ns NR:ns ## COG: MA3606 COG0282 # Protein_GI_number: 20092406 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Methanosarcina acetivorans str.C2A # 1 394 1 395 408 488 60.0 1e-138 MIVLVVNCGSSSLKYQLVDMKNEEVMAKGLVERIGLEEGILTHKWQGKKKELKQPIPDHN VAVKLVLESLTDKECGVIASMDEIDAVGHRVVHGGEKFACSTLITDAVMDALNECVDMAP LHNPPNIIGINACKAIMPQVPQVGVFDTAFHQTMPAKAFMYGLPYELYTEDGIRRYGFHG TSHRYVAGETARVMGVPLEKLRIINCHLGNGSSLAAIKYGKSIDTTMGFTPLPGVLMGTR CGDIDPAIVLHEMERRHLSAKEMDTLMNKKSGVLGISGVSSDFRDLGEAAAKGNERAKLA LDMFHYQVRKAIGALAAAMEGVDVITFTAGVGENGIEDRAAICRGLAYLGAKLDEERNNV RGKDALISTDDSTVKMYVIPTNEEIMIARDTRDIVSQIK >gi|290781761|gb|ADGP01000014.1| GENE 18 31580 - 32210 520 210 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1469 NR:ns ## KEGG: Acfer_1469 # Name: not_defined # Def: haloacid dehalogenase domain protein hydrolase # Organism: A.fermentans # Pathway: not_defined # 3 208 22 227 229 104 33.0 3e-21 MYAMTEVFQQLHGKDTPMPMIAAGGRTDNYICQQLLYKAHGVMPTDTEVQEFCRHYEATL LKWLRKKGKNGGVFSQVRPLLSYLDGLKNVTQLLLTGNSEEGARLKLEFFALASYFDFSV SGFACNFYYRDDLARNAYKIAKNTWGSEIEEIVVIGDTPYDIQCGKAIGAKTVSVATGHY SYEALKACNPWIVTEVLPSPKDFAALLKLL Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:34:16 2011 Seq name: gi|290781684|gb|ADGP01000015.1| Megasphaera genomosp. type_1 str. 28L contig00037, whole genome shotgun sequence Length of sequence - 68732 bp Number of predicted genes - 73, with homology - 73 Number of transcription units - 19, operones - 12 average op.length - 5.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 398 515 ## gi|290968203|ref|ZP_06559746.1| hypothetical protein HMPREF0889_0856 - Term 833 - 874 8.8 2 2 Op 1 24/0.000 - CDS 898 - 4104 4363 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 3 2 Op 2 7/0.000 - CDS 4106 - 5164 1098 ## COG0505 Carbamoylphosphate synthase small subunit 4 2 Op 3 15/0.000 - CDS 5161 - 6450 1523 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 5 2 Op 4 8/0.000 - CDS 6434 - 7375 1153 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 7535 - 7594 4.5 - Term 7386 - 7423 7.1 6 3 Op 1 4/0.000 - CDS 7611 - 8159 836 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 7 3 Op 2 15/0.000 - CDS 8172 - 9089 275 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 8 3 Op 3 . - CDS 9099 - 9536 490 ## COG0597 Lipoprotein signal peptidase 9 3 Op 4 . - CDS 9602 - 9913 305 ## COG0011 Uncharacterized conserved protein - Prom 9943 - 10002 12.7 - Term 9983 - 10013 4.3 10 4 Op 1 . - CDS 10034 - 10489 427 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 11 4 Op 2 . - CDS 10513 - 10956 768 ## gi|290968214|ref|ZP_06559757.1| hypothetical protein HMPREF0889_0868 - Prom 10988 - 11047 2.5 - Term 10973 - 11012 7.3 12 5 Op 1 50/0.000 - CDS 11053 - 11391 448 ## PROTEIN SUPPORTED gi|121534661|ref|ZP_01666482.1| ribosomal protein L17 13 5 Op 2 32/0.000 - CDS 11409 - 12386 1322 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 14 5 Op 3 48/0.000 - CDS 12431 - 12823 599 ## PROTEIN SUPPORTED gi|227372900|ref|ZP_03856378.1| SSU ribosomal protein S11P 15 5 Op 4 . - CDS 12852 - 13220 524 ## PROTEIN SUPPORTED gi|227372901|ref|ZP_03856379.1| SSU ribosomal protein S13P 16 5 Op 5 . - CDS 13243 - 13356 192 ## PROTEIN SUPPORTED gi|238928132|ref|ZP_04659892.1| ribosomal protein L36 17 5 Op 6 . - CDS 13381 - 13599 272 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 18 5 Op 7 . - CDS 13592 - 13870 211 ## gi|290968221|ref|ZP_06559764.1| conserved hypothetical protein 19 5 Op 8 12/0.000 - CDS 13885 - 14631 975 ## COG0024 Methionine aminopeptidase 20 5 Op 9 28/0.000 - CDS 14633 - 15283 636 ## COG0563 Adenylate kinase and related kinases 21 5 Op 10 53/0.000 - CDS 15298 - 16560 1315 ## COG0201 Preprotein translocase subunit SecY 22 5 Op 11 48/0.000 - CDS 16562 - 17002 581 ## PROTEIN SUPPORTED gi|121534652|ref|ZP_01666473.1| ribosomal protein L15 23 5 Op 12 50/0.000 - CDS 17024 - 17203 234 ## PROTEIN SUPPORTED gi|227372908|ref|ZP_03856386.1| LSU ribosomal protein L30P 24 5 Op 13 56/0.000 - CDS 17221 - 17721 674 ## PROTEIN SUPPORTED gi|227372909|ref|ZP_03856387.1| SSU ribosomal protein S5P 25 5 Op 14 46/0.000 - CDS 17740 - 18099 418 ## PROTEIN SUPPORTED gi|238928139|ref|ZP_04659899.1| ribosomal protein L18 26 5 Op 15 55/0.000 - CDS 18134 - 18676 620 ## PROTEIN SUPPORTED gi|212637969|ref|YP_002314489.1| Ribosomal protein L6 27 5 Op 16 50/0.000 - CDS 18694 - 19086 530 ## PROTEIN SUPPORTED gi|227372912|ref|ZP_03856390.1| SSU ribosomal protein S8P 28 5 Op 17 50/0.000 - CDS 19116 - 19385 379 ## PROTEIN SUPPORTED gi|227372913|ref|ZP_03856391.1| SSU ribosomal protein S14P 29 5 Op 18 48/0.000 - CDS 19401 - 19943 696 ## PROTEIN SUPPORTED gi|219666502|ref|YP_002456937.1| ribosomal protein L5 30 5 Op 19 57/0.000 - CDS 19966 - 20283 371 ## PROTEIN SUPPORTED gi|226309819|ref|YP_002769713.1| 50S ribosomal protein L24 31 5 Op 20 50/0.000 - CDS 20302 - 20670 559 ## PROTEIN SUPPORTED gi|227372916|ref|ZP_03856394.1| LSU ribosomal protein L14P 32 5 Op 21 50/0.000 - CDS 20697 - 20951 288 ## PROTEIN SUPPORTED gi|229859315|ref|ZP_04478975.1| SSU ribosomal protein S17P 33 5 Op 22 50/0.000 - CDS 20989 - 21189 252 ## PROTEIN SUPPORTED gi|227372918|ref|ZP_03856396.1| LSU ribosomal protein L29P 34 5 Op 23 50/0.000 - CDS 21179 - 21616 671 ## PROTEIN SUPPORTED gi|227372919|ref|ZP_03856397.1| LSU ribosomal protein L16P 35 5 Op 24 61/0.000 - CDS 21616 - 22287 969 ## PROTEIN SUPPORTED gi|227372920|ref|ZP_03856398.1| SSU ribosomal protein S3P 36 5 Op 25 59/0.000 - CDS 22301 - 22636 460 ## PROTEIN SUPPORTED gi|227372921|ref|ZP_03856399.1| LSU ribosomal protein L22P 37 5 Op 26 60/0.000 - CDS 22651 - 22929 427 ## PROTEIN SUPPORTED gi|227372922|ref|ZP_03856400.1| SSU ribosomal protein S19P 38 5 Op 27 61/0.000 - CDS 22952 - 23779 1179 ## PROTEIN SUPPORTED gi|227372923|ref|ZP_03856401.1| LSU ribosomal protein L2P 39 5 Op 28 61/0.000 - CDS 23811 - 24095 368 ## PROTEIN SUPPORTED gi|227372924|ref|ZP_03856402.1| LSU ribosomal protein L23P 40 5 Op 29 58/0.000 - CDS 24095 - 24718 792 ## PROTEIN SUPPORTED gi|227372925|ref|ZP_03856403.1| LSU ribosomal protein L4P 41 5 Op 30 40/0.000 - CDS 24751 - 25389 891 ## PROTEIN SUPPORTED gi|227372926|ref|ZP_03856404.1| LSU ribosomal protein L3P 42 5 Op 31 16/0.000 - CDS 25404 - 25715 472 ## PROTEIN SUPPORTED gi|121534758|ref|ZP_01666579.1| ribosomal protein S10 - Term 26006 - 26049 9.4 43 5 Op 32 30/0.000 - CDS 26061 - 27248 1419 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 44 5 Op 33 51/0.000 - CDS 27281 - 29353 2435 ## COG0480 Translation elongation factors (GTPases) 45 5 Op 34 56/0.000 - CDS 29385 - 29855 726 ## PROTEIN SUPPORTED gi|227372944|ref|ZP_03856421.1| SSU ribosomal protein S7P 46 5 Op 35 . - CDS 29901 - 30272 562 ## PROTEIN SUPPORTED gi|227372943|ref|ZP_03856420.1| SSU ribosomal protein S12P 47 5 Op 36 . - CDS 30351 - 30596 325 ## Vpar_1500 putative ribosomal protein L7Ae-like protein - Prom 30650 - 30709 5.7 - Term 30771 - 30827 12.3 48 6 Op 1 58/0.000 - CDS 30835 - 35064 5333 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 49 6 Op 2 . - CDS 35086 - 38802 937 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 38951 - 39010 4.6 - Term 38862 - 38905 2.1 50 7 Op 1 . - CDS 39012 - 40268 633 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 51 7 Op 2 . - CDS 40336 - 42267 2275 ## COG3855 Uncharacterized protein conserved in bacteria - Prom 42320 - 42379 5.2 - Term 42373 - 42428 12.1 52 8 Tu 1 . - CDS 42459 - 43697 1589 ## COG0426 Uncharacterized flavoproteins - Prom 43753 - 43812 6.6 53 9 Op 1 . - CDS 43838 - 45103 1137 ## gi|290968258|ref|ZP_06559801.1| hypothetical protein HMPREF0889_0912 54 9 Op 2 . - CDS 45128 - 45784 756 ## gi|290968259|ref|ZP_06559802.1| hypothetical protein HMPREF0889_0913 55 9 Op 3 . - CDS 45781 - 47481 1413 ## gi|290968260|ref|ZP_06559803.1| putative membrane protein - Prom 47560 - 47619 7.5 - Term 47641 - 47687 6.1 56 10 Tu 1 . - CDS 47697 - 48143 632 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 48385 - 48444 14.7 + Prom 48349 - 48408 11.5 57 11 Tu 1 . + CDS 48442 - 49881 1514 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases + Term 50112 - 50149 8.0 - TRNA 50146 - 50221 89.0 # Lys TTT 0 0 - TRNA 50225 - 50299 73.5 # Gln TTG 0 0 - TRNA 50301 - 50376 63.3 # His GTG 0 0 - Term 50373 - 50415 8.5 58 12 Tu 1 . - CDS 50467 - 51318 1051 ## COG0421 Spermidine synthase - Prom 51367 - 51426 8.7 + Prom 51456 - 51515 6.2 59 13 Tu 1 . + CDS 51593 - 55921 4306 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Term 55964 - 56030 16.2 - Term 55960 - 56010 14.7 60 14 Op 1 . - CDS 56032 - 57216 1389 ## COG4796 Type II secretory pathway, component HofQ 61 14 Op 2 . - CDS 57227 - 57781 494 ## gi|290968266|ref|ZP_06559809.1| hypothetical protein HMPREF0889_0924 - Prom 57802 - 57861 7.8 - Term 57846 - 57897 10.2 62 15 Op 1 34/0.000 - CDS 57902 - 58669 248 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 63 15 Op 2 31/0.000 - CDS 58678 - 59328 828 ## COG0765 ABC-type amino acid transport system, permease component 64 15 Op 3 . - CDS 59359 - 60159 1240 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 60195 - 60254 6.8 - Term 60252 - 60286 1.2 65 16 Op 1 . - CDS 60308 - 60811 513 ## gi|290968270|ref|ZP_06559813.1| hypothetical protein HMPREF0889_0928 66 16 Op 2 . - CDS 60845 - 61174 469 ## gi|290968271|ref|ZP_06559814.1| conserved hypothetical protein 67 16 Op 3 . - CDS 61187 - 62095 1043 ## Vpar_0393 hypothetical protein 68 16 Op 4 . - CDS 62105 - 63049 968 ## COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - Prom 63093 - 63152 2.0 69 17 Tu 1 . - CDS 63173 - 64150 920 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 64201 - 64260 3.0 - Term 64257 - 64298 8.4 70 18 Op 1 . - CDS 64302 - 65603 1416 ## COG0148 Enolase 71 18 Op 2 . - CDS 65684 - 66484 732 ## gi|290968276|ref|ZP_06559819.1| hypothetical protein HMPREF0889_0934 - Prom 66534 - 66593 6.6 + Prom 66571 - 66630 6.9 72 19 Op 1 . + CDS 66668 - 68014 1128 ## COG0477 Permeases of the major facilitator superfamily + Prom 68017 - 68076 3.9 73 19 Op 2 . + CDS 68111 - 68542 703 ## Acfer_2074 hypothetical protein Predicted protein(s) >gi|290781684|gb|ADGP01000015.1| GENE 1 2 - 398 515 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968203|ref|ZP_06559746.1| ## NR: gi|290968203|ref|ZP_06559746.1| hypothetical protein HMPREF0889_0856 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0856 [Megasphaera genomosp. type_1 str. 28L] # 1 132 1 132 132 174 100.0 2e-42 MKLSGKQLTTAVLIGLMGISAGGVAMAKPPIHQGAQLGGPTVPASQPGTSTVQPSATGQP DPAKTTDELIAEIQTNLTNQGKELDKKATKDELEKYATKDEMNDALSKKADASEVTALAA QLAQKANQSDVE >gi|290781684|gb|ADGP01000015.1| GENE 2 898 - 4104 4363 1068 aa, chain - ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 4 1046 6 1048 1071 1236 59.0 0 MAKDIKKVLVIGSGPIIIGQAAEFDYAGTQACRALKEEGVEVVLINSNPATIMTDEDIAD RVYVEPISLEYVTAVIKKERPDGLLATLGGQVGLNMAVELSRAGVLKTYDVTLLGTDLAA IQEAEDRELFKKAMKDIDQPVAESDIVEDVSSALDFARTIGYPIIVRPAYTLGGTGGGIA YTEEELAAIAARGIKLSPIHQILVERSVAGWKEIEYEVMRDKADNCIIVCNMENIDPVGV HTGDSIVVAPSQTLNDLQYQMLRTASLKIIRRLKIEGGCNVQYALDPKSNRYYVIEVNPR VSRSSALASKATGYPIAKVAAKVALGKTLDQIPNAVTGKTTACFEPTLDYCVVKFPRWPF EKFSLADKTLGTQMKATGEVMALDRTFEGALLKAVRSLEIGVDYLALPHIENKSLLDIVD LLKKQDDERIFVVARALRLGISEEKIHMLTGYDVWFIRKIKHLTELEQELRTQGLTPETV VQAKKYGMPDSCLAQLTGKTESEVRAFRTQLGVRPTFKMVDTCAAEFAAATPYYYSCYAA EDEVRPLGERSVIVLGSGPIRIGQGIEFDYCSVHSSWALRRLGMKSIIVNNNPETVSTDF DTSDSLYFEPLTVEDVMAVVEKEKPVGVICQFGGQTAINLAAPLARRGVAILGTSVDGMD RAEDRERFDELLAKLHIPRPDGRIATSDTEAMRVAKELQFPLIVRPSYVLGGRAMEIVYN ESELERYLREAVIASPDHPILIDEYMVGREIEVDAVADGTDVYIPGIMEQVERAGVHSGD SIAVYPPQHVTQEMTAQIVDYTTRIALELQVKGAVNMQFVVAAGKLYVIEVNPRSSRTVP FLSKVTHVPIVELATRIALGETLAEMGYGSGLLPAKSHVAAKAPVFSFSKIGLAEIALGP EMKSTGEVMGIGKTYSEALYKAVSGAKMRVPAGGTVLVTVADRDKAEALQLAHGFCDLGY RIMATTGTGKYLQENGLEVTIVRKIHEGGETIATLLRDGKIDLVLNTLTFGKHPERDGFN LRRMAVELAVPCLTSLDTAREVLRVFADKGKDNAYYTVAALQDYDQDA >gi|290781684|gb|ADGP01000015.1| GENE 3 4106 - 5164 1098 352 aa, chain - ## HITS:1 COG:CAC2645 KEGG:ns NR:ns ## COG: CAC2645 COG0505 # Protein_GI_number: 15895903 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Clostridium acetobutylicum # 1 348 1 351 351 332 46.0 6e-91 MNGMLVLENGKRFYGKLLTSAPAMGEVVFNTAMTGYQETFTDPSYAGQIITMTYPLMGNY GLFHEIEQAERPYAAGFIVGELCGEPSNWQNEGPLSTFMMNHHIPCLYDTDTRAITREIR QHGVMKGVLVPETAATSDIRAALARPLETQWVRKVTTRDIKTAGSGTYHVAVMDYGAKQN ILRDLVRNNCRLTIFPATTPAAEVLAVQPDGIFLSNGPGDPQDIPYIVDEVKKMIGKKPI FGICLGLQMLGLALGGKSYKLPFGHRGANHPVQDVQTGRVYITSQNHGYAIAADTLPPTA QVTYRHLHDNTLEGFVVPSQHIMCVQYHPEASPGPTDSLYLFEQFVKMMEEC >gi|290781684|gb|ADGP01000015.1| GENE 4 5161 - 6450 1523 429 aa, chain - ## HITS:1 COG:BH2538 KEGG:ns NR:ns ## COG: BH2538 COG0044 # Protein_GI_number: 15615101 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Bacillus halodurans # 1 428 1 427 428 345 43.0 1e-94 MTLLVKNGRVVNPAKKQDELCDIYIEDGIIRAMGPHLSLQADDTLDASGLTVTPGLIDMH VHLRQPGQSGKETLDSGTAAAAAGGFTRVATMPNTSPVIDSALIADGLRYHIEKESHVKV EIIGAVSKGMEGRELAAMGGMVKAGVAAFSDDGHYVENCDFMRKAMEYSSMLKKVIIDHC EDTHLIADGVMHEGAVSAALGLKGRPAVAEDIAVARDILLAQATGCAVHIAHISTKNAVA MVRRAKAAGIPVTAEATPHHVIFTDEALRTYDTRFKVNPPLRSEEHRAAVLAGLQDGTID AIVTDHAPHSWDEKDREFNAAPSGFVGLETCVGAVLTHLYHTGRMDLTAIVEAMSVRPAA ILQVPGGVLAEGCAADLTLLDLQAEWTVQAKNFYSQSKLSPFDGMVFKGKPAATIVDGRI VMKRGEVSA >gi|290781684|gb|ADGP01000015.1| GENE 5 6434 - 7375 1153 313 aa, chain - ## HITS:1 COG:slr1476 KEGG:ns NR:ns ## COG: slr1476 COG0540 # Protein_GI_number: 16330844 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Synechocystis # 17 301 21 325 331 276 48.0 3e-74 MSIKGKSLFGLEGVGKEDLELILRVAEKMKTVVNSDNKKLPLLHGKSVANMFFEPSTRTR SSFELAAKYLGADVLNFTPAISSLVKGESFRDTLLTVTALGVDAIVMRHKQEGAPFFAGQ CVDPLIINAGDGAHEHPTQALLDLFTIAEVKGHIDGLKVVIVGDIDHGRVARSNIYGLKT LGADVHLVGPRTLLQPEMASLGVTVHYDLAEALENADVINVLRIQKERQGSGFFPGDREY ASLFGIHRDRLQAAKKDVLILHPGPMNRDLEIGTDVCYGAHSAIQEQVKNGISVRMAVLY LTIIGGDDVDLTR >gi|290781684|gb|ADGP01000015.1| GENE 6 7611 - 8159 836 182 aa, chain - ## HITS:1 COG:BH2541 KEGG:ns NR:ns ## COG: BH2541 COG2065 # Protein_GI_number: 15615104 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Bacillus halodurans # 8 180 5 180 180 176 55.0 2e-44 MWREKTQLLDAKAMSRAVRRIAHEIIERNRGLEQTILIGIHTRGVPLAKRLAAELEQIEG CGVPVYEIDVSAYRDDRRESRVSEISSTEKTFQVDGKTVILIDDVLYTGRTVRAALNAIM ELGRPQIIELAVLIDRGHRELPIRADYVGKNVPTSRREEVSVQMRDTDGIEQVVLREAVA DT >gi|290781684|gb|ADGP01000015.1| GENE 7 8172 - 9089 275 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 81 289 83 279 285 110 34 2e-23 MEQKTWQSTPADEGVRLDVYVARMLSVSRTYAQDLIKKGLVRVQDNMGKANCRLEDGQCI TVSFSPSAVLSAEPENIPLHILYEDAHIIVVNKARGMVVHPAPGNPSGTLVNALLYHCGG ELSGINGVIRPGIVHRLDKDTSGVMVVAKTDPAHRGLAAQIKAHTAHRTYWALVHGNIAE ERGTIEAPIGRHPKDRIKMAVTFKGGREATTHFHVLQRYGEYTWLACRLETGRTHQIRVH LAYIRHPVVNDPVYGYKRDDFPIQGQVLHSRCLDFVHPVTGEPMHVEAPPAADFSACLER IRTHS >gi|290781684|gb|ADGP01000015.1| GENE 8 9099 - 9536 490 145 aa, chain - ## HITS:1 COG:BS_lsp KEGG:ns NR:ns ## COG: BS_lsp COG0597 # Protein_GI_number: 16078609 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Bacillus subtilis # 1 135 1 140 154 93 41.0 2e-19 MQVIIIAAVLTAADQAVKAVIQRSMFLHESIPVIPDFFHLTYIVNRGAAFGVLENQQWLF LLVAVILFLLYGVFYRNIPRSRLIHCGLGLLLGGALGNALDRALKGAVVDFFDFRVWPVF NVADMGIVIGVLLLLWYSWTHSSTK >gi|290781684|gb|ADGP01000015.1| GENE 9 9602 - 9913 305 103 aa, chain - ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 97 16 114 117 90 52.0 7e-19 MNTLIALCIAPCGTGDEYAADIAEVVRIIRKSGLANRTNSMFTEIEGEWDAVMAVVKEAT AYFADRGIRTEVVLKADIRPGHTQMMTRKPAAVERLLQETGKD >gi|290781684|gb|ADGP01000015.1| GENE 10 10034 - 10489 427 151 aa, chain - ## HITS:1 COG:PAE2253 KEGG:ns NR:ns ## COG: PAE2253 COG0494 # Protein_GI_number: 18313213 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pyrobaculum aerophilum # 6 131 15 140 157 87 38.0 6e-18 MDAQGRVLLGRKKRGFGAGKWNGFGGKIEAGETIRQCAVRELREEAGLLAAETALQGAAR LFFRFQDRPAWNHWGYVYMVYDFQGTPQETEEMAPAFFAPQDIPYSSMWKADALWLPKIL AKQIQIGEICFSYDGETVLATTLQPRRNAAW >gi|290781684|gb|ADGP01000015.1| GENE 11 10513 - 10956 768 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968214|ref|ZP_06559757.1| ## NR: gi|290968214|ref|ZP_06559757.1| hypothetical protein HMPREF0889_0868 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0868 [Megasphaera genomosp. type_1 str. 28L] # 1 147 1 147 147 255 100.0 9e-67 MAQKTVLAINFTKERLQQLKPLAVLVKAPVRPVGEEEKERTIGQVMGLSPQEIAAIENLK PTAAEVAEEQKETAGDSIVIEEPVTQEAIVLCGFENKDVHTLLDAIRGSRLKSVPLKAML TPHNISWTVQYMLTELAKEYAYFRQKR >gi|290781684|gb|ADGP01000015.1| GENE 12 11053 - 11391 448 112 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121534661|ref|ZP_01666482.1| ribosomal protein L17 [Thermosinus carboxydivorans Nor1] # 1 112 1 112 112 177 77 2e-43 MAYRKLGRDSSARKALLRSIVTSLFQHERIETTEAKAKELRKIADKMLTLAKRGDLHARR QVLAYMMDEGVVKKLFDEIAPKYKDRQGGYTRIIKSGARQGDAAPMVIIELV >gi|290781684|gb|ADGP01000015.1| GENE 13 11409 - 12386 1322 325 aa, chain - ## HITS:1 COG:BH0162 KEGG:ns NR:ns ## COG: BH0162 COG0202 # Protein_GI_number: 15612725 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus halodurans # 1 324 1 314 314 290 51.0 2e-78 MIEDNKFKVKTVERSDDGTYGKFVCEPLDRGYGITLGNSLRRVLLSSLDGVAITSIKIDG VLHEFSTIQGVREDVSEIILNLKQLRLRFTRDDVNELDISVDVNGECEFTAKDLDVNSDI EILNPELHLATLDADAHIYMTCHIERGKGYIPSTKNKKETDMIGVIPIDSIFSPVMRTKY EVGNIRVGNEMDYDSLTLEVKTDGSIAAENAVAKAASIMVSYLDYFQKIASDPVANEALA PFTTPEGEEPEVEEGPELSQVKIDVLDLSVRASNCLKRANIYTLGDLVERTEEDLSKIRN LGKKSVDEIIEKLKDYGFDLKSDEE >gi|290781684|gb|ADGP01000015.1| GENE 14 12431 - 12823 599 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372900|ref|ZP_03856378.1| SSU ribosomal protein S11P [Veillonella parvula DSM 2008] # 1 130 1 129 129 235 91 6e-61 MAKNNVRSNKRKEKKHVESGAAHIRSTFNNTIVTISDTKGNALSWASAGGLGFRGSRKST PFAAQMAAEQAAKAAMEHGLRQVEVFVKGPGSGREAAIRALQAAGLEVNSIKDVTPIPHN GCRPPKRRRV >gi|290781684|gb|ADGP01000015.1| GENE 15 12852 - 13220 524 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372901|ref|ZP_03856379.1| SSU ribosomal protein S13P [Veillonella parvula DSM 2008] # 1 122 1 122 122 206 81 3e-52 MARIAGVDLPRDKRVEVGLTYIFGIGLSSSQEILKKTGINPDTRVRDLTEDEVQKIREVI GSEYKVEGDLRREGAMNVKRLIEINSYRGKRHRAGLPVRGQRSKTNARTRKGPRKAIAGK KK >gi|290781684|gb|ADGP01000015.1| GENE 16 13243 - 13356 192 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238928132|ref|ZP_04659892.1| ribosomal protein L36 [Selenomonas flueggei ATCC 43531] # 1 37 1 37 37 78 94 9e-14 MKVKPSVKKICEKCKIIKRKGRVMVICENPKHKQKQG >gi|290781684|gb|ADGP01000015.1| GENE 17 13381 - 13599 272 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 109 72 5e-23 MSKEDVIEVEGVVVEALPNAMFKVKLENEHIVLAHVSGKMRMNFIRILPGDRVTMELTPY DLNRGRITYRFK >gi|290781684|gb|ADGP01000015.1| GENE 18 13592 - 13870 211 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968221|ref|ZP_06559764.1| ## NR: gi|290968221|ref|ZP_06559764.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 92 4 95 95 153 98.0 3e-36 MKPVGSVVQSTAGRDKGALYIVVGKLDYPYVWVADGRKYKADKPKKKNCRHLRRVETHGA TEPAGAIRISNERIRSVLTGIGMDLTREVTHV >gi|290781684|gb|ADGP01000015.1| GENE 19 13885 - 14631 975 248 aa, chain - ## HITS:1 COG:BH0156 KEGG:ns NR:ns ## COG: BH0156 COG0024 # Protein_GI_number: 15612719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus halodurans # 1 246 1 246 248 276 56.0 2e-74 MVILKSKREIEYIREAGKITAHALLLMKKLAKPGVTTGELDRRCEEYIRSCGAFPSCKGY YGFPATICASVNEEVVHGIPGHRKLRDGDIISVDLVVNKNGYHGDATLTIPVGHVDPKVM QLVTVTEECLQKGIEQAVTGNHLGDIGHAVQAYAESFGYGVVRDYVGHGIGTDMHEDPEV PNYGIPGHGDLLEEGLVIAIEPMITMGSEKVRQLKNGWTVVTRDKKPAAHFEHTVAITEN GPEILTLP >gi|290781684|gb|ADGP01000015.1| GENE 20 14633 - 15283 636 216 aa, chain - ## HITS:1 COG:SA2027 KEGG:ns NR:ns ## COG: SA2027 COG0563 # Protein_GI_number: 15927809 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Staphylococcus aureus N315 # 1 209 1 209 215 249 55.0 4e-66 MYILLMGPPGAGKGTQAERLIETYGIPQISTGDMFRAAVKEQTPLGLEAKKYMDNGQLVP DAVTVGIVKERLAKDDCKKGFILDGFPRTTSQAVSLDAILQDLGIKLNGVVNIAVPDEEL VRRTTGRQICRSCGATYHITFKPSKKAGVCDKCGGALYQRDDDKMETVKKRLCVYAAQTK PLIDYYKNSNLYIEINGAREMDAVFNDIVASLGKSK >gi|290781684|gb|ADGP01000015.1| GENE 21 15298 - 16560 1315 420 aa, chain - ## HITS:1 COG:BH0154 KEGG:ns NR:ns ## COG: BH0154 COG0201 # Protein_GI_number: 15612717 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecY # Organism: Bacillus halodurans # 1 420 1 430 430 343 48.0 3e-94 MLENLQNVMNVPEFRKRAVFTLIMFVIFRLGVHIPVPGVDSSVIENLFSSGNLFGLLDLF SGGALSKFSILAMSITPYINASIIMQLLTSVVPTFEQWAKDNQDGRDKIQKVTRYGTVVL AVIQALAMSYALKVNGALMVDSWTMVLMVTVILTAGTCFLMWLGDQITAGGIGNGISLII FAGIVARFPNGCSTVYKYIQAGSINIFQAVLFIIIALFMIAVVVEVTQGQRRVTVQYAKR IVGRKMYGGHSTHIPLKVNQAGVIPLIFASSVLMFPVTIAQFSQNATIKMIAGWFAWGTA TNTVLYAVLIFFFTYFYTAISLNIPQLTENMQKYGGFIPGIRPGQPTAKHIDRIMTRITL AGAFFLAFVAILPNFIGWITGVQGVYFGGTALLIVVGVAIDTMKQAESLVLNRQYQGFMK >gi|290781684|gb|ADGP01000015.1| GENE 22 16562 - 17002 581 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121534652|ref|ZP_01666473.1| ribosomal protein L15 [Thermosinus carboxydivorans Nor1] # 1 146 1 146 146 228 78 7e-59 MKLHEMTIIPGSKKKRNRVGRGIGSGNGKTAGKGMKGQLSRSGGGKRPGFEGGQMPLYRL LPKRGFTNIWAKQYAEVNVSVLNRFDNGTTVDPVALVEAGVLKNVCDGVRILGNGELEKS LTVVAQGFTKSAQRKIEAAGGKVEVI >gi|290781684|gb|ADGP01000015.1| GENE 23 17024 - 17203 234 59 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372908|ref|ZP_03856386.1| LSU ribosomal protein L30P [Veillonella parvula DSM 2008] # 1 59 1 59 59 94 83 1e-18 MAKVKVTLVRSLAGHPGDQRATVVALGLGKTNSSVVKEVTPQIGGMLHKVRHLVKVEEI >gi|290781684|gb|ADGP01000015.1| GENE 24 17221 - 17721 674 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372909|ref|ZP_03856387.1| SSU ribosomal protein S5P [Veillonella parvula DSM 2008] # 1 165 1 165 167 264 79 1e-69 MAKVDHAGLELQENVVFINRVAKVVKGGRRFSFSALVVVGDGNGRVGAGLGKAGEVPEAI RKGVEDAKKHLVSVPLKNGSIPHQIIGIFGAGQVLLKPAAEGTGVIAGGPVRAVLELAGV RNILTKSIGSSNPNNMVQATIEGLTRLKDVNKVAELRGKTVEEIYG >gi|290781684|gb|ADGP01000015.1| GENE 25 17740 - 18099 418 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238928139|ref|ZP_04659899.1| ribosomal protein L18 [Selenomonas flueggei ATCC 43531] # 1 119 3 119 119 165 72 5e-40 MKKSKNAIRVKRHWRLRKHINGTAERPRLNVFRSLSHIYAQVIDDRNGVTLASASSLDKE IKGQNNGGNVEGAKLVGALVAKRALEKGITAVVFDRGGYLYHGRVAALAAAAREAGLKF >gi|290781684|gb|ADGP01000015.1| GENE 26 18134 - 18676 620 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637969|ref|YP_002314489.1| Ribosomal protein L6 [Anoxybacillus flavithermus WK1] # 1 179 1 179 179 243 64 2e-63 MSRVGRMPIDIPAGVNVTLNGQVITVKGPKGELTRTLHADMKVTVADNVITVERPTDEKG HRALHGLTRALIANMVTGVTTGFKKELEIVGVGYRAQMKGKKLALTLGFSHPLELDAPAG ITIECPSATSIIISGANKEHVGEFAAKVRKYRLPEPYKGKGIRYVGEHVRRKAGKAGTKK >gi|290781684|gb|ADGP01000015.1| GENE 27 18694 - 19086 530 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372912|ref|ZP_03856390.1| SSU ribosomal protein S8P [Veillonella parvula DSM 2008] # 1 130 1 128 128 208 84 6e-53 MAMTDPIADMLTRIRNANSAEHQTVEMPASKMKAAVLEILKEEGFVKNFEAVNEGKTLKV ALKYGSNKEKVITGIKRISKPGLRVYAGKEELPRVLGGLGIAVISTSKGVMSDKQARKLG LGGEVIAYVW >gi|290781684|gb|ADGP01000015.1| GENE 28 19116 - 19385 379 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372913|ref|ZP_03856391.1| SSU ribosomal protein S14P [Veillonella parvula DSM 2008] # 1 89 1 89 89 150 80 2e-35 MAKKSMLEREKKREKMVAKYAELRAELKAKGDYEALSQLPANASPVRLHNRCKVTGRPHG YIRKFGICRITFRELAYKGQIPGVKKASW >gi|290781684|gb|ADGP01000015.1| GENE 29 19401 - 19943 696 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|219666502|ref|YP_002456937.1| ribosomal protein L5 [Desulfitobacterium hafniense DCB-2] # 1 179 1 179 179 272 72 3e-72 MSRLKDKYLSEVVKGLQEKHNYKNVMQIPKVTKVVINMAVGEAVTNSKALDGAVNDMTII SGQKPIITKAKKSIAAFKIREGMNLGCKVTLRGERMYEFLDKLMNLALPRVRDFHGVSAT GFDGRGNYTLGLKEQLIFPEIEYDKIDKARGMDITIVTTAKTDEESRHMLTLMGMPFEKQ >gi|290781684|gb|ADGP01000015.1| GENE 30 19966 - 20283 371 105 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226309819|ref|YP_002769713.1| 50S ribosomal protein L24 [Brevibacillus brevis NBRC 100599] # 4 105 1 102 104 147 69 2e-34 MGKMHVKKGDTVIVIAGKEKGKKGKVIAAFPKKERVVVEGLNLVKRHTKPSQNNPQGGII TKEAAIHVSNVMLVDPESGKPTRVKMVQQADGTKVRTAVKSGKAI >gi|290781684|gb|ADGP01000015.1| GENE 31 20302 - 20670 559 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372916|ref|ZP_03856394.1| LSU ribosomal protein L14P [Veillonella parvula DSM 2008] # 1 122 1 122 122 219 87 2e-56 MIQQETMLNVADNTGAKKLLCIQVMGGSYRKYGNIGDIITASVKDASPGGVVKKGDVVKA VIVRSKKGLRRVDGSYIRFDENAAVVINNDKSPKGTRIFGPVARELREKDFMKIISLAPE VL >gi|290781684|gb|ADGP01000015.1| GENE 32 20697 - 20951 288 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229859315|ref|ZP_04478975.1| SSU ribosomal protein S17P [Streptobacillus moniliformis DSM 12112] # 1 84 1 84 84 115 69 7e-25 MERNERKIRVGKVVSDKMDKTVVVTVEYKTQHKLYKKPIISSVKFKAHDENNECRIGDIV RIEETRRLSKDKHWRVVAIVEKAQ >gi|290781684|gb|ADGP01000015.1| GENE 33 20989 - 21189 252 66 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372918|ref|ZP_03856396.1| LSU ribosomal protein L29P [Veillonella parvula DSM 2008] # 1 65 1 65 67 101 78 1e-20 MKVKEIRNLSAAEMNEKVVSLKEELFNLRFQHATGQLENPKRIREVKKTIARIKTIQREA ELNAQA >gi|290781684|gb|ADGP01000015.1| GENE 34 21179 - 21616 671 145 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372919|ref|ZP_03856397.1| LSU ribosomal protein L16P [Veillonella parvula DSM 2008] # 1 145 1 145 145 263 86 3e-69 MLIPKRVKYRKQFRGRMKGKALRGNKVAHGEFGLVAAEPSWITNRQIEAARIAMTRYIKR GGKVWIKIFPDKPITAKPAGTRMGSGKGAPEYWVAVAKPGRVLFEMGGVSEEVAREAMRL AGHKLPIKTKFVVRGQELGGEQNEG >gi|290781684|gb|ADGP01000015.1| GENE 35 21616 - 22287 969 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372920|ref|ZP_03856398.1| SSU ribosomal protein S3P [Veillonella parvula DSM 2008] # 1 222 1 222 222 377 84 1e-104 MGQKVNAHGFRVGVVKPWDAKWYAEKDYATLLNEDVKIREFLKKQLFIAGVSRIEIERSA KRIKLIIHTAKPGMVIGRGGAGIEDIKKALKRFTSKAVDVNIAEIKQAELDATLVAENIA GQLERRIGFRRAMKQCVGRTMRMGAKGIKIMCSGRLGGAEIARSESVRDGSIPLHTLRAD IDYGFAEAHTTYGCIGIKCWIYKGEILPEAKQAPQKKREGSEA >gi|290781684|gb|ADGP01000015.1| GENE 36 22301 - 22636 460 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372921|ref|ZP_03856399.1| LSU ribosomal protein L22P [Veillonella parvula DSM 2008] # 1 111 1 111 111 181 81 7e-45 MEAKAVAKHIRIAPRKIRIVVDLIRGKDAAEALAILKFTPKVGSRVVEKTLRSAMANAEH NNDMNIDNLYVSEIFVDQDATMKRIHPRSRGQAFKILKHSSHLTVVVKERA >gi|290781684|gb|ADGP01000015.1| GENE 37 22651 - 22929 427 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372922|ref|ZP_03856400.1| SSU ribosomal protein S19P [Veillonella parvula DSM 2008] # 1 92 1 92 93 169 82 5e-41 MSRSVKKGPFVAAHLLKKVDAMNEANEKKVIKTWSRASTILPGFVGHTIAVHDGRKHVPV YVTEDMVGHKLGEFAPTRTFKGHAKSEKTTGK >gi|290781684|gb|ADGP01000015.1| GENE 38 22952 - 23779 1179 275 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372923|ref|ZP_03856401.1| LSU ribosomal protein L2P [Veillonella parvula DSM 2008] # 1 274 1 274 276 458 78 1e-128 MAIKSFKPYSASRRFMTVSTFEEITTSKPEKSLLVKVTNKGGRNNSGRMTVRHQGGGHKR RYRLIDFKRIKDNIPAKVATIEYDPNRSANIALLFYADGEKKYIIAPNGLKVGDVLYSGP EADIKVGNALPLANIPLGTLVHNVEMKIGKGAQMVRSAGESAQLMAKEGNYALLRLPSGE LRQVHVRCRATVGIVGNTDYENITLGKAGRSRWKGVRPGNRGVVMNPCDHPHGGGEGKAP VGRKRPVTPWGKPAYGVKTRDAKKASGKFIVKRRK >gi|290781684|gb|ADGP01000015.1| GENE 39 23811 - 24095 368 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372924|ref|ZP_03856402.1| LSU ribosomal protein L23P [Veillonella parvula DSM 2008] # 1 93 1 93 94 146 72 3e-34 MDMHDLLLKPIITEKTTMLMSDGKYTFKVPLHANKIEIRKAVESVFNVKVKSVATIRVLG KVKRMGKFEGKRSDYKKAVVTLQEGETIEFFEGA >gi|290781684|gb|ADGP01000015.1| GENE 40 24095 - 24718 792 207 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372925|ref|ZP_03856403.1| LSU ribosomal protein L4P [Veillonella parvula DSM 2008] # 1 206 1 206 207 309 73 2e-83 MPKVSTYNITGAKTGEIELNDSVFGVEVNEAVMRQALLRQLANERLGTHSTKTRGLVRGG GRKPWKQKGTGRARVGSSRSPLWVGGGTVWGPHPRSYAQKMPRKARRLAVKSALSDKVNT NELFVLDEIKLAAAKTKEVVALIKNFQFTGEKVLFVTDNDEIVIRCARNIEGVKAISTEG VNIFDLLHYTKLFVTKSAVAKIEEVLA >gi|290781684|gb|ADGP01000015.1| GENE 41 24751 - 25389 891 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372926|ref|ZP_03856404.1| LSU ribosomal protein L3P [Veillonella parvula DSM 2008] # 1 211 1 211 213 347 79 8e-95 MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH LTKPVKGQFAKAGVNPVKYLRELRLTDTPEYTVGQTLAADIFASGDLVDVIGTGKGKGFA GTIKRHGFHRGPMGHGSKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLSVV KVDMDKNLILIKGGIPGAKGSLVMIRDTVKPR >gi|290781684|gb|ADGP01000015.1| GENE 42 25404 - 25715 472 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121534758|ref|ZP_01666579.1| ribosomal protein S10 [Thermosinus carboxydivorans Nor1] # 1 103 1 103 103 186 89 3e-46 MAKQERIRIRLKAYDHKTLDQSAAKIVDTAKRTGAMVSGPIPLPTEKNIFTILRSPHVNK DSREQFELRTHKRLIDILEASNKTVDALMRLDLPAGVDIEIKL >gi|290781684|gb|ADGP01000015.1| GENE 43 26061 - 27248 1419 395 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 405 407 551 68 1e-156 MAKEHYERTKPHVNIGTIGHVDHGKTTLTAAITKVLSQKGYAKFEDYADIDKAPEERERG ITINTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLARQVGVPAIVVYLNKADQVDDPELIELVEMEVRDLLSSYEFPGDDIPIVVGSALKALE GDAEAEKSILELMAKVDEYIPTPDRPTDKPFLMPVEDVFTITGRGTVATGRVERGTVKVG DTVEIVGLAEEPKQTVVTGVEMFRKLLDLAEAGDNIGALLRGVDRKEIERGQVLAKPGSI HPHTKFKAQVYVLTKDEGGRHTPFFNGYRPQFYFRTTDVTGVIQLPEGTEMCMPGDNVKM DVELITPIAIEVGLRFAIREGGRTVGAGVVSEIDA >gi|290781684|gb|ADGP01000015.1| GENE 44 27281 - 29353 2435 690 aa, chain - ## HITS:1 COG:BH0131 KEGG:ns NR:ns ## COG: BH0131 COG0480 # Protein_GI_number: 15612694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Bacillus halodurans # 1 688 1 688 692 1002 71.0 0 MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRVHKIGEVHEGAATMDWMAQEQERG ITITSAATTAHWKDHRINIIDTPGHVDFTVEVERSLRVLDGSVAVFSAKGGVEPQSETVW RQAEHYHVPRIAFINKMDTTGADFLNCVQMMKDRLQANAVAIQLPIGAETTFTGIIDLVT MKAEVYEDTLGKEIEIVEIPADMKEQAEEYRQIMLEAVCETDDELMMKYLDGEEISTDEI KKAIRQAVVTNKLFPVLCGSAYKNKGIQMLLDAVVDYMPSPLDIPPVGGTNPDTGEEDTR KADDNEPFSALAFKIMADPFVGKLAFFRVYSGTLQAGTYVYNSTKGKKERVGRILRMHAN HREEVQEAYSGDIGAIVGLKDTTTGDTLCDEKNPIILEKMEFPEPVISVAVEPKTKADQE KMGTALSRLAEEDPTFRVKTDAETGQTIISGMGELHLDIIVDRMSREFKVDCNVGKPQVA YRETIRQDVKARGFFKRQSGGRGQYGDCWLELIPQEQGKGYEFENKVVGGAIPKEYIGSV EAGVREAMETGVLAGFPMVDIKVVVYDGSYHEVDSSEMAFKIAGSMGFKEGARKANPVLL EPYTKVEVVVPEEYMGDVIGDLNSRRGRVEGMEMRSGAEHINAFVPLAEMFGYATDLRSK TQGRGVYTMTFDHYEEVPKNVAEKIISEKG >gi|290781684|gb|ADGP01000015.1| GENE 45 29385 - 29855 726 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372944|ref|ZP_03856421.1| SSU ribosomal protein S7P [Veillonella parvula DSM 2008] # 1 156 1 156 156 284 88 1e-75 MPRKGPVPKRDVLPDPVYHSKLVTRFINKVMLDGKKGIAESIVYDAFDIIRSKMNKEPME VFEQALNNVMPVLEVRARRVGGANYQVPVEVRADRRLSLGIRWTVAYARKRGERTMKEKL AAELMDAFNNAGAAVKKKEDTHKMAEANKAFAHYRW >gi|290781684|gb|ADGP01000015.1| GENE 46 29901 - 30272 562 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372943|ref|ZP_03856420.1| SSU ribosomal protein S12P [Veillonella parvula DSM 2008] # 1 123 1 123 124 221 90 1e-56 MPTISQLVRKGRQDSISKSTAPALKNCPQKRGVCTRVYTATPKKPNSALRKVARVRLTNA IEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVSDRQQSRSKYGAK KAK >gi|290781684|gb|ADGP01000015.1| GENE 47 30351 - 30596 325 81 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1500 NR:ns ## KEGG: Vpar_1500 # Name: not_defined # Def: putative ribosomal protein L7Ae-like protein # Organism: V.parvula # Pathway: Ribosome [PATH:vpr03010] # 11 81 11 81 81 62 46.0 5e-09 MSLVLGADARKTVGAKQTLKAMKRNETVQLYIAKDAEKVVVAPLWQCASVMGIPVDTTYS MVELGKACRIKVKAAAVGVLK >gi|290781684|gb|ADGP01000015.1| GENE 48 30835 - 35064 5333 1409 aa, chain - ## HITS:1 COG:BS_rpoC KEGG:ns NR:ns ## COG: BS_rpoC COG0086 # Protein_GI_number: 16077176 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Bacillus subtilis # 1 934 1 889 1199 1116 60.0 0 MLDVNEFDSMRIGLASPEKIMEWSHGEVKKPETINYRTLKPERDGLFCERIFGPTKDWEC HCGKYKRIRYKGVVCDRCGVEVTRAKVRRERMGHIKLATPVSHIWYFKGIPSRMGLILDI SPRALEKVLYFASYIVLDPGDTPLSKQQLLTETEYRQYLDMYGDKFRVGMGAAAVQELLR ALDLETLNKELREELRDATGQRRLKAIRRLEVVESFRHSGNKPEWMIMDVIPVIPPELRP MVQLDGGRFATSDLNDLYRRVINRNNRLSRLLNLGAPDIIIRNEKRMLQEAVDALLDNGR RGRPVAGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMHQCGLPKE MALELFKPFVMKKLVEQGIATNIKNAKKKVERVSNEVWDVLEDVITEHPVLLNRAPTLHR LGIQAFEPILWEGRAIKLHPLVCTAFNADFDGDQMACHLPLSVEAQSEARTLMLSAHNIL APKDGKPVAVPTQDMVLGAYYLTLVKPGAKGEGKSFSSYEEVMLAYDAKVIDIEALIKVR IPGHGLIETTAGKLLYNDQLYDELRLYHTDKVMVFDDPQEAVFAYRNGIIDSTHLVKIRV EDGRIQDFGFSQLKEEFDVDLLSIRPLPAHKVDRQQAAEFIKDKQFVEVPCLGVLMNKKE IGKLVDACFHLVGNTKTAALLDRIKNIGYHYARQAGMSIAISDIQIPEGKWTILDAADKQ VQHVSTMFQRGLITEDERYRKTCAIWEKATDDVTEVMMDNMDPFNSIFMMADSGARGNKQ QIRQVAGMRGLMADPSGRIIDLPIKANFREGLSVLDYFTSSHGARKGLADTALRTADSGY LTRRLVDVSQDVIVREDDCDVFGIDLVRERARLASSCRQAVNLLRDKLIGRVLARNAVDP ETKETIFEEDHLLTNDDMDTVIAHKLPKLYLRGSQLDINDDLNHTNNIEIVSLGAPEEGF REAIRKSMVENMLGKTVEGTIYDSNGIEICVDKTPLTEEAIERILQSDVEEVKVRNNDIR GVEVTAIVEGSGVIEPLEERIEGRTAAETLVNPDTGEVIVALNEEIMAAQAKEVAKYYTK VRIRSVLTCHSRYGVCAKCYGRDLGTGGKVNVGESVGTIAAQSIGEPGTQLTMRTFHTGG VASAGDITQGLPRVEELFEARKPKGNAIVTEIDGVISISEKEDHHDINIVHVTNQDGDER SYTIPYGAHLVVHEGDSVKKGARITAGSINPHDILQILGVEATQRYLVYEVQKVYKSQGV GINDKHIEVIVRQMLRKMKIEDAGDADVLPGDYIDVNTFEDMNRRVRANGGKTAEGRPML LGITKAALATESFLSAASFQETTRVLTDAAIKGKVDPLLGLKENVIIGKLIPAGTGMSRY RKVKVINMVPPAILEDGETGENEDDAVTE >gi|290781684|gb|ADGP01000015.1| GENE 49 35086 - 38802 937 1238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 659 1153 861 1391 1392 365 42 1e-100 MFKPVQVGKRTRYTYAKINEVLKMPHLLDLQNKSYEWFLEKGLKDIFKDISPIEDAAGNL SLSFENFKLGEPKYDIRECKERDTTYAAPLRVQVRLVNHETGEVNDKDIFMGDFPLITDT GTFIINGAERVIVSQLVRSPGVYYGREIDPMGIRLYTSTVIPNRGAWIELETDANDIVYA RIDRNRKIPVTVLIRALGWSTNAEILDLFFDDKRLKATFEKDTTESQEEALVEIYKKLRP AEPPTVESARNLFEGLFFDARRYDMARVGRYKAAKKLGWERRLFGLTLHEPIVDRETGEI IVEAHTEIGSEEVKKIRDSRVFSGEGLVEALVEKVDGSVYKIICNNSNLPYEHRTITRED IIAHIDYLLNLMDGFGTVDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVRERMTTQDA ETVEAQSLINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAG FEVRDVHHSHYGRMCPVETPEGPNIGLISSLACFGKVNEFGFIEAPYRRVDKETGVVTNE VSYITADEEEQYIIAQANEPLTEDGHFVHERVACRHGEDTREFKADRVDFMDVSPKEVIS VGTSMIPFLENDDANRALMGANMQRQAVPLLRTQAPLVGTGMEYKAACDSGVCILAKHDG VVTRVTGDEIEVQSDAGSVDTYKLIKFVRSNQSTCINQRPLVYKNEHVTAGQVLADGMAT DGGELALGYNILVAYMPWEGYNYEDAVLLSEDLPKNDLYTSIHIEEYECDARDTKLGAEE ITREIPNVSEESTKNLDENGIIMIGADVVPGDVLVGKVTPKGETELTPEERLLRAIFGDK EREVRDTSLRVPHGESGKVVNVRVFSRENNDELPPGVNRLVRVYIAQKRKIHEGDKMSGR HGNKGVVSRVMRQEDMPFLPDGTPVQIVLNPLGVPSRMNIGQILETHLGWAMHEMGLQIK AMDPKLEAKLKEAGYDVDAYGMPKPDKAGVHIATPVFDGAQAEDVFEALKIAGLPEDGKS VLYDGRTGEPMDRRVTVGYTYFLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRF GEMEVWALEAYGAAYTLQEMLTIKSDDVVGRVKAYEKIVKGENIPEPGVPESFKVLLKEL QAIGLDVQILNEDGDEVVVKELEEEDEATPEQTEEIRRVMEGEENGNERLAAELSGEEPV HNGEEEDVMSGMGLDVMADIEAAAEPAADTEDESDEDE >gi|290781684|gb|ADGP01000015.1| GENE 50 39012 - 40268 633 418 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 10 416 16 416 418 248 37 6e-65 MNIIDELTWRGAINQMTDEAGLRKLTEEKKISLYCGVDPTGDSMHIGHLIPFMMLKRFAA AGHHPVVLIGGGTGAIGDPSGRKTERQLQTMEKVQANAAKLRAQFAHLFGEEDRITFVNN ADWLSKIDVLTFLRDYGKLFSVNVMLAKDVVASRLDAGISFTEFTYQILQSMDFEHLFST YHVQLQIGGADQWGNITAGTDTIRKIHGSTAEAYGLTIPLMLKADGTKFGKTAGGAVWLD PEKTSPFEFYQFWLNQDDADVVKYLKYFTFLGQEEINALAEAVQKEPEKRAAQRRLAEEV TVFVHSKEALAEAQRITEALFHGSIEELSERELLQAFGNMPTVEVSATEKDVVNWLVDAG IYTSKRQAREDVAHGAVTINGVKVKQAEEIVYPHKNSHGKFVVVRKGKKKYTLAKIKQ >gi|290781684|gb|ADGP01000015.1| GENE 51 40336 - 42267 2275 643 aa, chain - ## HITS:1 COG:CAC1572 KEGG:ns NR:ns ## COG: CAC1572 COG3855 # Protein_GI_number: 15894850 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 11 633 14 661 665 620 48.0 1e-177 MSESIASYTPERLRYLELLAKEYPTQAATFTEIINLQAIVNLPKGTEHFMSDLHGEYEAF YHILNNCSGVIREKVDLLFSQTLTGQERANVLTLIYYPKEKMDMLVREHKLTDAWARTNL DILLQVAKLLSSKYSRSRVRKAMAPVFRFVIDELLHAQPEEDKNRHAYHTKIVDSILETG SIREFITALAALIKRLAVDHLHIIGDIYDRGPHADKIMDTLMQHHSLDIQWGNHDILWMG AAAGSLACTANVLRNNIRYHNLEILESGYGISLRSFALFALRTYTQDDGIDPMVKAINVV LSKLEGQAIMRHPEYGMADRLLFHTINREQGTILLGGKTYALTTRDFPTVDPQDPYALSA EEEKIMTQIQTAFLESERLQQHVRFFYSHGAMYCSYNNNLLFHGGIPLQEDGSFKEVMIQ GKAYHGKALMERVDRLVRQAYQQRDPDSLDYMWYLWVGIDSPVSGRTVKTFERSYIVDET TWKEPQNAYYRLNRDKRECIKILHEFGIDSPQGHIINGHTPVKVKKGESPIRAEGKEICI DGGFCKAYQGSTGIAGYTLIFNSHGIRIKSHYPFKNVAQVLQHNADIESDSAQIEWEPKR LMIGDTDEGKKLWQMIEALKDLLQAYRQGSVQEKMPAAETPDF >gi|290781684|gb|ADGP01000015.1| GENE 52 42459 - 43697 1589 412 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 393 1 392 405 344 41.0 2e-94 MYCVEEIKNGVYWMGCNDFQSELFERIFPIPEGMTYNSYFIDDEKTCVLDAMDKSCRDEF LENVEGLLKGRQLDYFVLQHMEPDHASSAVALLEKYPEAKIIGQPQTFKLFEQFFRHPMK DRYVNVTEGDQLTLGKHTLQFIKAPMVHWPEVIMTYDVTDKILFTADAFGMFGTVGNTYA DQVDFEEDYLAQARRYYVNIVGKYGPQVMNVLKKAAGIPIDVLCPLHGVMFRTPETIQYI LKKYLHWAQCIPEKKGVVIAFASIYGDTQRAACKLAHKLSDAGVRDVRLYDVSKTHSSYI TAKAWEYSHLVLASPTYNLNLFLPMETCLHDLETLLFQNRKIAVIGCHSWASVAYKTMLE YVQHKFKNCELIEPTIDMKSSLAADQECILDEMAKNIAADVAAYADPDTLIK >gi|290781684|gb|ADGP01000015.1| GENE 53 43838 - 45103 1137 421 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968258|ref|ZP_06559801.1| ## NR: gi|290968258|ref|ZP_06559801.1| hypothetical protein HMPREF0889_0912 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0912 [Megasphaera genomosp. type_1 str. 28L] # 1 421 1 421 421 766 100.0 0 MKRWIQSGMTVLLAVSFVLLSGFRTQTIIHDDGSETQDVLKVAATAQGQESLKSDADEFQ KRNYMVMDYSNDNGEGFRALKTITNEGANKSSVDRVVHKTHDGLLCTTYYIDYAYTPQSI AELRWGKPMPENGVDLEYIVSFPSGTGVTCNSTKADEQGSTYMWRLRNDVPSAIRLQATV WHKLFIYIALLLIILWVLIVFFMEHKRRNVISWKQAAHLRRLEGLFLLIPLCIVAYMGYE YYVGTHITAGSLAKVSQQQQEELVERREEDKKVQEADTRPEIATDDADTTDMKTEIADIA GALRRLNQSYQNGELTGDEARRQARDLIQQMESLKQGSTGLSQANQEIIRQVLGRLLREA NRIGQGDASRSLQNATNQQGNDTGAADTAGTPTKSQHAGTEQNDSHSRSDAGEATTVTEG E >gi|290781684|gb|ADGP01000015.1| GENE 54 45128 - 45784 756 218 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968259|ref|ZP_06559802.1| ## NR: gi|290968259|ref|ZP_06559802.1| hypothetical protein HMPREF0889_0913 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0913 [Megasphaera genomosp. type_1 str. 28L] # 1 218 1 218 218 431 100.0 1e-119 MSTVHAEFAKLGKYKWVIYALVVIAQLSTVAYAAWRYHNIGVDGIPYQWRCVPRLETAAF GTDYIRIIFPEDTAKWLDNSMPETGKKIYVYISRNTQGMLQIEGASATRPPFGKDYMTAV ITSICSGGKVQFQVPFGRYRMAPQMRDGIYRIGSTDSVIAQIRMKKGAGVIEGIFVNGVP LEQSSSGAVIAARKAAQQPKTSPSSHGIDTGMVPPAEE >gi|290781684|gb|ADGP01000015.1| GENE 55 45781 - 47481 1413 566 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968260|ref|ZP_06559803.1| ## NR: gi|290968260|ref|ZP_06559803.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] putative membrane protein [Megasphaera genomosp. type_1 str. 28L] # 1 566 1 566 566 1005 100.0 0 MKERGIEKIGHIVAEWEAKGWLMPTGKEAVQRQLQREMAPLQMRSAYVAAIGIGAALLGV AILWVLTQAWYYVYPEVRMGAAVVLVLLGQGGIAAVMLQEKQGTERAEIMGMLQYCFCLA AVAMIAQTYYWGWSIMSYLLPCVVVSLPAIYLLRSVSGLILYDISVLWWTACGGTLQQAG GSVTVWVLLMLSLPFYYLLLHKGEEKRLAVFSWVTTITVFCAFALVSATTAYIPFLALAA LAATIMLTGYTIDIRKAWGTPFRWCGRFAAIASLWLSCIPASWRGIADIQGFHWTATAVT AVLLAAMVGLFVKGVKQRLWSPLLYSIIPVVIAGETVLVRSGVYSSLPLWVSTLYLFIMG AWEVWQGVRQARRGHTLLGILVLIGLAGMVIEVRTVSPMTMVAAYILVFLAARQIAKKRR ENSQKAVRHRHLRTHITVKSRPNSTGETVDGPTRDRMKRAENLPAWMEENGISASSLQEA MKDKAEQIKQTVTVIPRPQETSSFVPPVFKQPEDIPLPGEGIPAQQEIEIKDRGVSRSPW QAREKREKKDKKRVLSPWGTEERNKK >gi|290781684|gb|ADGP01000015.1| GENE 56 47697 - 48143 632 148 aa, chain - ## HITS:1 COG:MA2512 KEGG:ns NR:ns ## COG: MA2512 COG0589 # Protein_GI_number: 20091342 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Methanosarcina acetivorans str.C2A # 4 148 6 145 154 80 36.0 8e-16 MAQYKNIIVPTDGSVNSKRAVEHAVIIAQASKAAVTLVYVANIVSVISNFDHIPNSSGYV TEQVAMDMEKEGKAVLADFAKNIPDNIEVNSVFEVGSPGPAILSVAKKNNADLIVMGSRG LGPIKGLFMGSVSSYVVTHSTCPVMIVK >gi|290781684|gb|ADGP01000015.1| GENE 57 48442 - 49881 1514 479 aa, chain + ## HITS:1 COG:NMA0753 KEGG:ns NR:ns ## COG: NMA0753 COG1055 # Protein_GI_number: 15793728 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Neisseria meningitidis Z2491 # 38 479 29 469 473 333 46.0 5e-91 MSKLFKRLLCILSLLLAATPAVFAEGIGHEAVSQSLPVWSIIPFVGMLLSIAVIPLIHAH WWEHNMFRVAVGWSLLFLIPFAAMYGYGEATYRLLESILLDYIPFLVLLFGLFVVAGGIA IKGTLSGTPKVNALLLFIGAFLASWVGTTGAAMLMIRPVLKANDWRQNKVHIIIFFIFLV ANVGGCLTPLGDPPLFMGFQRGVPFTWTFHLFPVLALNAVLLFVLFFFLDHHFYKKELAA GRTPETVEEKREPRRIEGIHNIVFIFLIILGVIANGVLPKEFAFFAHNAGIPVFDEVVFP YATLVEIVLILLAAFLSLKTTPHWTRAWNDFSYGPIAEVAKLFIGIFITMIPALMLLKTH GAQLGLTTPWQLFWATGTLSSFLDNTPTYLVFLQTAGALGEHPGIETAVGIVPQLVLEAI SAGAVFMGAITYIGNAPNFMVKSIAEENGVKMPSFFGYMAWSCAILLPIFIITTLIFFI >gi|290781684|gb|ADGP01000015.1| GENE 58 50467 - 51318 1051 283 aa, chain - ## HITS:1 COG:BH3811 KEGG:ns NR:ns ## COG: BH3811 COG0421 # Protein_GI_number: 15616373 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Bacillus halodurans # 2 277 1 274 275 276 51.0 5e-74 MMKQYVTEHQSKHLDLTAEATRILFQGKSEFQDIIVADTPEFGRMLVLDGVFQTSDKDEF MYHESIVHIPLFLHPHPKHVLIIGGGDGGSAREAVRHACVETVTMVDIDGKVIELSKQYF PAISKAMREKNPKLTVKVGDGIAFMQEAENFYDVIIVDCSDPVGPGEGLFTSSFYQDTYK ALKEDGLFVQQTESPFMHRQLVHDIFSRVSAIFPISRLYTAYIPLYPTGMHCFTMGSKTY DPLTWQPNRKRDFSTQYYNEGIQRSAFVLPNFVKDVLYGKKER >gi|290781684|gb|ADGP01000015.1| GENE 59 51593 - 55921 4306 1442 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 8 672 1 663 663 833 59.0 0 MTAKVKVMDTMLHIGIDIGSTTVKIAVLNEKKQCLHACYVRHYTDIRQKVWDLLQNAFEI FGDRQITVAMTGSGGMALAEYLKIPFIQEVIAGTKAVRTYHPQADVIIELGGEDAKITYL TGGSEHRMNGACAGGTGAFIDQMGTLLHTDASGLNEMAKHADTLYPIAARCGVFAKTDVQ ALMNEGAGKENIAASVFQSIVFQTITGLACGRPIKGTVCFLGGPLTYLSQLREQFAKTLH LQEEEIIAPENAQVYVAMGAALGSFQAPPISFMNLMNRLKNIDESSLTQSDRLPPLFESA DELQAFRLRHSRHTVPTRDLATYEGACFLGLDAGSTTIKAALLSEDNEILYSHYQTNEGS PLKAAQRIIEDIYAQLPPRAFIAKTGITGYGEALLKEAMHIDIGEVETIAHYQAAAHFCP DVDFILDIGGQDMKCTRLKDGHIEDILLNEACSSGCGSFLDTFAKSLKFSIEDFAQAALA AKSPIDLGSRCTVFMNSKVKQAQKEGAALADISAGLSYSVIKNALYKVIKVKDPEKMGKH IVVQGGTFYNDAVLRAFEKLLHRQVIRPAIAGLMGAFGMALICHTAYEEDHKHSTLLDKK EMANLHVATSIRHCGLCTNNCLLTVNTFNDGRSFITGNRCERGAAGSIHTKTKKLPNLYK IKYNMLFHYKPLTNAPRGTIGIPRVLNMYEDYPFWFTFFTQLGYEVVLSDRSSKELFEKA MDTVPSDSACYPAKLVHGHIENLLEKGVDRIFYPCIQNGPAEGSRDNSFNCPMVMSYPEV IRNNMGERLAATNTPILSPFLPIHDKHRIVPRLQDELQVWGLGKKEIKTAALAAWKEEEA YKQKFYALTKRTLERLKKDGDRAIVLCGRPYHIDPEINHGISELITGLGLAVLTEDGVAP LEHLPKELRVVDQWSYHSRLYRAARYIVTQPNLECVELSSFGCGLDAIVSDQVQEILARG HKIHTLLKIDEGSNLGAIRIRLRSLLFVMNHRSAVATPPAEEYTYKKAVFTEEAKKTDVI LAPSMTPIHFPMFQSAFIHEGFHLEILPHQGAEAIDNGLTYIHNDACYPAIMSLGQIITA LKSGKYDLNHTAVIVSQTGGCCRATNYIGMIRKALADADMGQVPIISLNAKGLNAHPGFK PGLGFWHRLAMAVMYGDALQQVLYRMRPYEKVKGTAEALFKKWQTKCTHDLLKADIRTYK KNMRDLIREFDNIEIDEKLKPRIGLVGEIYVKFHPIANNHIVRMIEEEGGEIVVSGLADF ILYGLLDTQFRYKYLSGSLFSSLLSKSAVKLIEWYRKPYRKAVEKSRHFDPITSIYDIAD EAKKYLSLGHEAGEGWFLTGDMIDLIHRGAKNIVCLQPWACLPNHVTGKGMIKTLKASFP DTSIVAIDYDPGASAVNQTNRLKLMLTTTFDGIRKEAAPQQKPLRPFLPGVHLNSSIPGE KQ >gi|290781684|gb|ADGP01000015.1| GENE 60 56032 - 57216 1389 394 aa, chain - ## HITS:1 COG:TM0088 KEGG:ns NR:ns ## COG: TM0088 COG4796 # Protein_GI_number: 15642863 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Thermotoga maritima # 18 365 919 1284 1285 115 26.0 2e-25 MKTCVRVLAIGIAAISWYMPVSALQVRVSDAPIRTVLEGLAKSGNLNLIIDDSVQGNMTL HLDHVTPAQAVEAIAASQNLFYDTGSPIGIITAGRNEEKGKQYYTWQLKNTTPEAVIRAI QAVVPAAAVKSYADSNTVVVGSTKREAQLVNKLVQQLDKKTAQVDVAVRIVSLDRKALHK RGIEWDWQPFGSGSQTVFSWLGQIQALSEQGKAEILASPHIMASNGKAAQILIGDRVPVL KEHLANGEKTASISYEEAGVKLNYTPYIHQDGSVTASIEAEVSTPVWVPEMKAYRISTRR AKTIVRMKPDKTLVIGGLIGKEEMEHFRKVPLLGDIPLVGKLFQSRYKTAKETEVVIMLQ ARPVQDEEQNTVATELFPPIEDEKCLLAGNGVDR >gi|290781684|gb|ADGP01000015.1| GENE 61 57227 - 57781 494 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968266|ref|ZP_06559809.1| ## NR: gi|290968266|ref|ZP_06559809.1| hypothetical protein HMPREF0889_0924 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0924 [Megasphaera genomosp. type_1 str. 28L] # 1 184 1 184 184 332 100.0 9e-90 MKWRQQMSERWRKYGRTYLPYVGIVAILISMGAGWQWRHGNTQGAVTETATTETEEKPAE GAEAAETVRKEPGTCVCSTLAAVRPQAVKDLFAPVSLPPVQENTPPTGSADATEGVPTGS GRVEEFPKVCGFIQAGQQPIVLLREGDKTRACQVGDTIGPYVVVYIRGRCIGLGRDNMVK EVTG >gi|290781684|gb|ADGP01000015.1| GENE 62 57902 - 58669 248 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 19 243 28 237 312 100 26 3e-20 MSFIEMNHIKKKFADTLVLNDVTMHVEAGEVVSIIGPSGSGKSTFLRCLCQLETIDSGEI MVDGKVLVQTPEGTERAVYAEPQTMRGICRKMGMCFQQFNLFPHMTVLENILEAPRQVKK MKTEEIMPLAEELLHKVGLWQKKDMYPPRLSGGQQQRVAIARALAMEPEIMLFDEPTSAL DPELTGEVLRTIRQLADEDMTMVIVTHEMAFAKEVASHVIFMAEGKIQEEGSPQDVFEHP KRERTKNFLQSMIHL >gi|290781684|gb|ADGP01000015.1| GENE 63 58678 - 59328 828 216 aa, chain - ## HITS:1 COG:lin1851 KEGG:ns NR:ns ## COG: lin1851 COG0765 # Protein_GI_number: 16800918 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 1 214 1 212 213 195 54.0 6e-50 MEYVWSIVPAIGAGLQVTLKIFCITIILSLPFGVLLSVGRTSRIWGIRKIIGIYIYIMRG TPLMLQILFIYYGLPFLVDGLRLPPFGAAIIAFVLNYAAYFAEIFRGGIQSIGRGQYEGA KVLGMTYGQTMRRIVLPQVVKCVLPPVANETINLLKDTSLVYILAMNDILRITRSIVQRD FDTTAFLVAAVFYLVFTFILTRVFMYLEKRFSVYDN >gi|290781684|gb|ADGP01000015.1| GENE 64 59359 - 60159 1240 266 aa, chain - ## HITS:1 COG:SPy1274 KEGG:ns NR:ns ## COG: SPy1274 COG0834 # Protein_GI_number: 15675229 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 261 3 271 278 204 40.0 1e-52 MKKRSINIWMTLVIVMCVAVLAGCGHKPSETTGIPDKIIIGMDDNFPPMGFRDDQGQLVG FDIDVAKEASKRLGIPVEFQSIDWDSKEAALKSGQVDVLWNGLTITPERQKVIAFSKPYM KNDQLLVVRSDSPIHDKQDFSGKCIGTQEGSSSIDALNRHKDFQRSLKDVKKYGDYVNAF MDLEVGRIDGVLVDSVVGRYYMEKKPGKFKVVDKSLGEETFGIGMRKEDKPLQDKMNKVM AELSRDGTLSALSKKWLGDDITMKIQ >gi|290781684|gb|ADGP01000015.1| GENE 65 60308 - 60811 513 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968270|ref|ZP_06559813.1| ## NR: gi|290968270|ref|ZP_06559813.1| hypothetical protein HMPREF0889_0928 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0928 [Megasphaera genomosp. type_1 str. 28L] # 1 167 1 167 167 331 100.0 1e-89 MEKCRWEDRFPCGNVEAELRNGVAFCRYMRVIFLGGGIYFFWLVLHEPFWGAKAENMALV IFCLWRIYRQQDIMCVIAAEGLIVRRQFATLREFWEEQVRPEKRFIFLPYEHIFYISPHW REIQMGEPVEGGIVIVPVHLQFLHKADKRRIVERIRSSGENEFKNNI >gi|290781684|gb|ADGP01000015.1| GENE 66 60845 - 61174 469 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968271|ref|ZP_06559814.1| ## NR: gi|290968271|ref|ZP_06559814.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 109 1 109 109 176 100.0 5e-43 MGKFKIPKNRDISEMFAGVEEKETFETAIWEEEQPSVKKHKSAPKQSAAAFRRQFFDEDL QEKVGNLLLEIKLAYYKDGIGDISLEVVKNGRNIEIKTHPKKRKKKDGE >gi|290781684|gb|ADGP01000015.1| GENE 67 61187 - 62095 1043 302 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0393 NR:ns ## KEGG: Vpar_0393 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 6 288 7 282 315 257 46.0 5e-67 MKLRSVLVAFSVGIACQAAVYVYLDQVLFAPTSAFQIGGTNQQEALGFGGEPNGQSYYSY DKRFMATIVEDTISIYEAGKKEAPRRIRLHGRKVSFFEWLPDRDLAILATYGRGGKDNRF GVYLAQYNPLYPDRELDTPIKDAPRDSKIIDVAYSTATNVIYMKLEVAKNRYRIYRTDAN YATRRIPVQAENIGRIAVFYDSDTFFYDNLKTGVVYMFDGISCSWREISPVGSKFRLIGI DGQEIYIGELNANGEVIAAYRGRLKKGFAKIATYATPQKFSQITLNSMHEASDKADEADD HS >gi|290781684|gb|ADGP01000015.1| GENE 68 62105 - 63049 968 314 aa, chain - ## HITS:1 COG:CAC2633 KEGG:ns NR:ns ## COG: CAC2633 COG4632 # Protein_GI_number: 15895891 # Func_class: G Carbohydrate transport and metabolism # Function: Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase # Organism: Clostridium acetobutylicum # 11 314 34 353 354 203 39.0 4e-52 MKKYFQAIGKFLLVLILFFCVTSPFVVLFGPFDNLKRTVVGAVLKSRHPQYITWLFSQEE IEEILGGISTIPKQKLFKFKENKDTSLNLKHINAKRFKGFLLEIPDPKRVTVATAANMSE KGETVSGIATRTGAVAAINAGGFYDANGTGTGRSPYGFILHDGKFLLGGNLADSEVNEFV GFNEDGNLIAGNYSKGELVRMGVREGITFGPALIVNGKKMITGGDGGWGVGPRTAIGQRK DGTVLFLVIDGRQPGYSVGATLRDIQNILFEEGAVIAANLDGGSSSTLFFNGKVINKPAD LLGERMIPTAFIVQ >gi|290781684|gb|ADGP01000015.1| GENE 69 63173 - 64150 920 325 aa, chain - ## HITS:1 COG:YPO1288 KEGG:ns NR:ns ## COG: YPO1288 COG0111 # Protein_GI_number: 16121571 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 33 288 39 292 321 164 32.0 2e-40 MYHISVLTSRQDEDEFGERLRDIARVTYCPSMTEEEMAEAMEDAEIIICKHEPLRASLLE KLTDLKLIVILSTRSDSVDVAAAQRSGITVLNNTSYCVEDSADHTCAMILALLRQLPEYQ SDISSHNRWQYGSVTWPIHRVQHNIIGLVGYGHVGRAVAKRMKVFGCHVQAYDPFVKEQV MRADQVQAVDFDKLLKTSDLISLHMPLDETTQYIFQDEQFEQMKRGAMFVNCCRGGLADE AALYHAVDGGHIRSAALDVLSMEHPGPMLLKMIARPEFLLTPNVSCHSVEADVQVRDDAE RYIRQFLEGNRENLPRVSPHFVEEM >gi|290781684|gb|ADGP01000015.1| GENE 70 64302 - 65603 1416 433 aa, chain - ## HITS:1 COG:CAC0713 KEGG:ns NR:ns ## COG: CAC0713 COG0148 # Protein_GI_number: 15894001 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Clostridium acetobutylicum # 4 429 5 428 431 511 61.0 1e-144 MKTIKIAEVKGREILDSRGNPTVQADVILENGTVGRGSSPSGASTGQFEALELRDGDAKR FGGKGVQTAAAHVDHTLAATLCGENVLEQLALDRAMVQADGTPDKSKLGANAILAVSLAT AAAAAVTTGLPLYRYLGGVNGTTLPVPMMNILNGGAHAANTVDVQEFMIMPVGADSFREG LRWCAEVYHALAALLKKEGVSTAVGDEGGFAPDLPDDETAIQYIIKAIEAAGYCPGSDFV LALDAAASEWKGAAAGEYRLPKSGRTFTSATLIAHWQKLVETYPIYSLEDGLDEEDWDGW QVLTQTLGNKIQLVGDDLFVTNSTRLAKGIASGCGNAILIKLNQIGSVAETLATIRLAQR AGYHTIVSHRSGETEDTFIADLAVAVNAGQIKTGAPNRSERVAKYNRLLQIEEELGPVSQ YLGIQALANRVNR >gi|290781684|gb|ADGP01000015.1| GENE 71 65684 - 66484 732 266 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968276|ref|ZP_06559819.1| ## NR: gi|290968276|ref|ZP_06559819.1| hypothetical protein HMPREF0889_0934 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0934 [Megasphaera genomosp. type_1 str. 28L] # 1 266 1 266 266 541 100.0 1e-152 MKEASSCKEQIEVTCPICREKGMFSGVSFCNGSRDRAMRKRILYDENLFFYTCPQCAETI RVDMTGLYCDDDHRFMVCLHPSEQLQTQYEALVAAKEIRKNYRCRSARTWGEWREKIVEM ETSRDDRWYEVLKAGAYRLLKPELRRQYPLAMCHIDYGAEGERTEQRNLVFLDATKAGEG VSYVISERILQQTKDIFSPILQQIQTVKPFSFIDAEWADALLTEVLRAAAKQPHGYAELL GYWIQCVGAEIFHYHVRGEAEPVEKL >gi|290781684|gb|ADGP01000015.1| GENE 72 66668 - 68014 1128 448 aa, chain + ## HITS:1 COG:MA1657 KEGG:ns NR:ns ## COG: MA1657 COG0477 # Protein_GI_number: 20090510 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Methanosarcina acetivorans str.C2A # 4 439 34 478 502 195 31.0 2e-49 MTTQGRIFLSVRIISFTGAFLTTGLTIMAPIIAMSFHLPPEKLSWMLSAILIPSAAFLLP LSKVADLYGRRRMYTRSLLAYALITLSLTLTPNFFYLLTGCLLQGISLAGILVSYMPLLL AATPRNRQGKYLGACVAMTYLGLTLGPPVGGVLAGTLGWRCLFLCTGILACLAYGIILPV KQEWYAPTAPFVNIVSTLLLIAGILCFLFGLSAYLSYPYLCWLGLFLLCLFLLHEYRSRH PLLPLFLFKSLSFSAANLTACMQYSATYGITFLLSLYLQLVHNFSPLLSAVILLIQPILM TVLSPLAGSGADRYGCRRMVTVGLFLSSLGLWGFACFPHCTVEMLLLFLLFTGTGAALFG APNNSAIMSAVAPSYHGLASGTLALSRTFGQALSMAAVTYILARFSSASVLRNTELLSAM HIAYLLFAVLSVMAVIVSLIPAPATDRR >gi|290781684|gb|ADGP01000015.1| GENE 73 68111 - 68542 703 143 aa, chain + ## HITS:1 COG:no KEGG:Acfer_2074 NR:ns ## KEGG: Acfer_2074 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 1 143 1 143 143 140 53.0 2e-32 MKKQLLTGALVLSLLTCGGLTTTTQAFNFGSLLKLGGVSFLVDRYSSQINTVLNKLMIKN GAGTNYATKVVPVLSVGTGNYIGAVQVIGPQRQVEKVKAVGQLDASINGIARANAYIPLA TTNVMNLHRVDGVGVSAVVDLKL Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:36:39 2011 Seq name: gi|290781638|gb|ADGP01000016.1| Megasphaera genomosp. type_1 str. 28L contig00026, whole genome shotgun sequence Length of sequence - 47207 bp Number of predicted genes - 47, with homology - 45 Number of transcription units - 23, operones - 7 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 208 135 ## - Prom 382 - 441 2.3 2 2 Tu 1 . + CDS 188 - 544 114 ## + Term 735 - 773 -0.9 3 3 Tu 1 . - CDS 541 - 1476 1052 ## COG1284 Uncharacterized conserved protein - Prom 1580 - 1639 8.8 + Prom 1483 - 1542 5.9 4 4 Op 1 . + CDS 1654 - 2529 858 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 5 4 Op 2 . + CDS 2522 - 3250 1113 ## COG1802 Transcriptional regulators 6 4 Op 3 . + CDS 3262 - 3429 174 ## gi|290968283|ref|ZP_06559825.1| hypothetical protein HMPREF0889_0453 + Term 3435 - 3472 6.4 7 5 Tu 1 . + CDS 3481 - 4878 1573 ## COG0277 FAD/FMN-containing dehydrogenases + Term 4890 - 4925 4.0 - Term 4867 - 4919 9.1 8 6 Op 1 2/0.250 - CDS 4928 - 5854 1055 ## COG1897 Homoserine trans-succinylase 9 6 Op 2 . - CDS 5874 - 7160 1495 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 7183 - 7242 12.1 + Prom 7560 - 7619 8.2 10 7 Tu 1 . + CDS 7646 - 8077 484 ## Vpar_0636 hypothetical protein 11 8 Tu 1 . - CDS 8161 - 10098 2026 ## COG1297 Predicted membrane protein - Prom 10152 - 10211 7.4 - Term 10273 - 10331 23.0 12 9 Op 1 . - CDS 10426 - 11751 1056 ## COG0531 Amino acid transporters - Prom 11791 - 11850 9.6 - Term 11876 - 11925 17.2 13 9 Op 2 . - CDS 11941 - 13122 1323 ## COG0183 Acetyl-CoA acetyltransferase - Prom 13159 - 13218 5.7 + Prom 13256 - 13315 6.7 14 10 Tu 1 . + CDS 13391 - 13546 105 ## gi|290968291|ref|ZP_06559833.1| hypothetical protein HMPREF0889_0462 + Term 13710 - 13751 5.4 + Prom 13576 - 13635 7.3 15 11 Op 1 . + CDS 13798 - 14277 431 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 16 11 Op 2 . + CDS 14296 - 14493 223 ## PROTEIN SUPPORTED gi|227372289|ref|ZP_03855771.1| LSU ribosomal protein L35P 17 11 Op 3 . + CDS 14534 - 14884 502 ## PROTEIN SUPPORTED gi|227498534|ref|ZP_03928678.1| 50S ribosomal protein L20 + Term 14902 - 14952 15.2 - Term 14893 - 14937 11.4 18 12 Tu 1 . - CDS 14960 - 15574 279 ## Lebu_1548 hypothetical protein - Prom 15640 - 15699 1.5 19 13 Tu 1 . + CDS 16004 - 19423 3766 ## COG5295 Autotransporter adhesin + Term 19450 - 19494 9.8 + Prom 19493 - 19552 10.0 20 14 Tu 1 . + CDS 19653 - 20351 966 ## COG0398 Uncharacterized conserved protein + Term 20356 - 20404 14.2 + Prom 20353 - 20412 8.1 21 15 Tu 1 . + CDS 20536 - 25530 5444 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 25564 - 25605 10.4 - Term 25550 - 25593 7.0 22 16 Tu 1 . - CDS 25622 - 26587 969 ## gi|290968299|ref|ZP_06559841.1| hypothetical protein HMPREF0889_0471 - Prom 26663 - 26722 8.0 + Prom 26715 - 26774 12.2 23 17 Tu 1 . + CDS 26822 - 27310 507 ## COG0521 Molybdopterin biosynthesis enzymes + Term 27330 - 27372 11.1 + Prom 27352 - 27411 2.2 24 18 Op 1 . + CDS 27459 - 28112 793 ## COG0406 Fructose-2,6-bisphosphatase 25 18 Op 2 . + CDS 28122 - 28838 496 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 26 18 Op 3 10/0.000 + CDS 28900 - 29961 1087 ## COG0006 Xaa-Pro aminopeptidase 27 18 Op 4 4/0.250 + CDS 29976 - 30533 785 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 30556 - 30600 3.8 28 19 Op 1 . + CDS 30609 - 30998 568 ## COG1302 Uncharacterized protein conserved in bacteria 29 19 Op 2 . + CDS 30982 - 31287 335 ## gi|290968306|ref|ZP_06559848.1| hypothetical protein HMPREF0889_0478 30 19 Op 3 . + CDS 31297 - 31722 581 ## COG0781 Transcription termination factor 31 19 Op 4 . + CDS 31719 - 32666 918 ## COG0533 Metal-dependent proteases with possible chaperone activity 32 19 Op 5 . + CDS 32668 - 33873 1062 ## COG1570 Exonuclease VII, large subunit 33 19 Op 6 . + CDS 33860 - 34108 344 ## gi|290968310|ref|ZP_06559852.1| exodeoxyribonuclease VII, small subunit 34 19 Op 7 3/0.250 + CDS 34095 - 34982 1166 ## COG0142 Geranylgeranyl pyrophosphate synthase 35 19 Op 8 5/0.250 + CDS 34999 - 35796 769 ## COG1189 Predicted rRNA methylase 36 19 Op 9 . + CDS 35808 - 36680 839 ## COG0061 Predicted sugar kinase 37 19 Op 10 . + CDS 36682 - 37254 508 ## COG0500 SAM-dependent methyltransferases 38 19 Op 11 8/0.000 + CDS 37294 - 37749 692 ## COG1438 Arginine repressor 39 19 Op 12 . + CDS 37757 - 39463 1742 ## COG0497 ATPase involved in DNA repair 40 19 Op 13 3/0.250 + CDS 39530 - 40327 1179 ## COG0289 Dihydrodipicolinate reductase 41 19 Op 14 3/0.250 + CDS 40349 - 41383 1203 ## COG0136 Aspartate-semialdehyde dehydrogenase 42 19 Op 15 . + CDS 41404 - 42291 894 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Term 42298 - 42332 -0.9 + Prom 42305 - 42364 3.4 43 20 Tu 1 . + CDS 42396 - 42653 314 ## COG2217 Cation transport ATPase + Term 42709 - 42750 8.1 - Term 42516 - 42545 1.4 44 21 Tu 1 . - CDS 42762 - 43619 946 ## COG0583 Transcriptional regulator - Prom 43685 - 43744 8.7 + Prom 43649 - 43708 8.3 45 22 Tu 1 . + CDS 43765 - 45018 1360 ## COG0019 Diaminopimelate decarboxylase + Prom 45050 - 45109 6.2 46 23 Op 1 1/0.500 + CDS 45141 - 45656 557 ## COG1827 Predicted small molecule binding protein (contains 3H domain) + Prom 45659 - 45718 2.8 47 23 Op 2 . + CDS 45750 - 47066 1608 ## COG0477 Permeases of the major facilitator superfamily + Term 47123 - 47180 20.1 Predicted protein(s) >gi|290781638|gb|ADGP01000016.1| GENE 1 1 - 208 135 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYSHHFHDKDHPRVCGKNPAAHYPIRMSVGSPPRVREERSYEQDTSGLLRITPACAGRTL RLCFTAFSQ >gi|290781638|gb|ADGP01000016.1| GENE 2 188 - 544 114 118 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVVRVHGKSSSRTRGGDPGIICGATQPRQFFPAHAGVILNQAFIAKLKLGSSRTRGGDP ATQEQANSLTKFFPHTQILGILLSDFVRGDGGGKRKKEELLSYARMVGKRLFFCKMYY >gi|290781638|gb|ADGP01000016.1| GENE 3 541 - 1476 1052 311 aa, chain - ## HITS:1 COG:CAC0431 KEGG:ns NR:ns ## COG: CAC0431 COG1284 # Protein_GI_number: 15893722 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 20 285 21 287 291 179 39.0 5e-45 MHTKSLSSIVDTAKPYLAAVIGNIICGLGINAFFIPHHLLSSGLSGIAIIIYYAVGFPVG TVVFILNIPIMLACYKYMGRKYTLISLIGTVLFSASIDLTAYTSQWVIIKDPILSGVAGG LMTGLGFGILYKYDVNSGGMDVVAAIVKKYYSLEMGNVVMIINTLVLFCSAYMFSLEPAV LTFIAIAIATFITNKVVIGMKQRKSVIIISNRAEEIANILMRYIGHGATYIYGQGAYTMQ DKRIIYAVIKLTEISKIKDIINKVDPSAFMIISDASEVVGRGFTGPAVHYHTYPGADMVM PHTKNTRPPEY >gi|290781638|gb|ADGP01000016.1| GENE 4 1654 - 2529 858 291 aa, chain + ## HITS:1 COG:BS_yabH KEGG:ns NR:ns ## COG: BS_yabH COG1947 # Protein_GI_number: 16077114 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus subtilis # 2 254 3 256 289 160 37.0 2e-39 MIQERAYGKINLGLSIIGKRSDGYHRIDTVFQSIALHDTVYIEAADSFQLTCSQAALACN TSNLAYKAYAALGAYRNKSSAAVHIHLEKRIPLAAGLAGGSADAAAVLRGLNRFWRLGLT AETLCHIGATLGADVPFCVQGGTQRGQGTGEVLTPMTPLPSWPVCILHPPVSVQTGMAYA WFDEQQVHEEVWMEKIVQSVQSADRERLSGCWGNSFESSVFPRVPAAAQCRNILKTHGLV PLLSGSGPTVFAFIPPTIAASSFRRLQQEANTAGIEVYRTHLVRGNGQNDG >gi|290781638|gb|ADGP01000016.1| GENE 5 2522 - 3250 1113 242 aa, chain + ## HITS:1 COG:AGl2035 KEGG:ns NR:ns ## COG: AGl2035 COG1802 # Protein_GI_number: 15891135 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 223 21 225 238 106 33.0 3e-23 MDKQGRNMLTPIQLDTYKPLREVVSDALRQAIKDGVLQPGQRLMEIKLADELGVSRTPIR EAIRKLEQEGFVVMVPRRGTYVADISLKDIAQVFEIRGALEELAAGLAAERITNDELECL ERILVEINEYMEHDDFAKIVDADVRFHDVLYQASRNQRLVDILHNLREQMLRFRSISMHY PGRLSATWEEHRQMVENIANHNSAMARKVAKRHMENSEKTLLKGIQKDEEAARTIKELYP DI >gi|290781638|gb|ADGP01000016.1| GENE 6 3262 - 3429 174 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968283|ref|ZP_06559825.1| ## NR: gi|290968283|ref|ZP_06559825.1| hypothetical protein HMPREF0889_0453 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0453 [Megasphaera genomosp. type_1 str. 28L] # 1 55 1 55 55 92 100.0 1e-17 MAYLKKLWQGWRARTAHMEDFENFLYTITTVLLGLLVIRMLVAWYMGRCNLFLGI >gi|290781638|gb|ADGP01000016.1| GENE 7 3481 - 4878 1573 465 aa, chain + ## HITS:1 COG:CAC2542 KEGG:ns NR:ns ## COG: CAC2542 COG0277 # Protein_GI_number: 15895804 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Clostridium acetobutylicum # 1 461 2 465 467 294 35.0 2e-79 MKTYQAVTEAVLQELREITGAAHVKTAPHILQSYSEDESGMLAHRQAEVVVFPGTAEEIS RIMKLANRRRIPVTPRGAGTGVCGGVVPVYGGIVVSMERLNRILEVRENGLYLVAEAGVR TADIQAAARAKGLLYAGDPCSSDSCFIGGNLATNAGGNKAVRYGTTRQQVYAVEAVLPTG EITQFGSVLKKCSTGFCLEQLLIGSEGILGIITKVILKLVPLPPYRFDGLIIFSSLEQAV SLVPKLMQSAVNPTSVEFMDKKFVRRAVQYCRVPLPHWQDAYYVIVTLEAFCSEELARMT ETLVSLGETCGAVDMVKADERVWKVRRNCLESTRELSRESTSEDLVVPLLQIGNCLHTLM KKAATYSFEAFCLAHAGDGNLHFQLLRGDLPAAVWQAEVADFRKFAYPFVYRSGGRLSGE HGIGCKRVAYMEAYTDPVELAVMKKIKNALDPHGILNPGKVLREE >gi|290781638|gb|ADGP01000016.1| GENE 8 4928 - 5854 1055 308 aa, chain - ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 300 1 301 303 322 50.0 6e-88 MPIQISDGLAAKKQLHEEGIATIDNQTALQQDIRPLRILILNLMPLKEQTELQFLRLLGD SPLQLDVDFCHMTSHTGTHTDNSYLEKNYYTFRDIQHRRYDGFIITGAPVETLPFTAVDY WPELTHYLEWAKTRVFSTLYFCWGAQAGLYYHYGIEKRPLSQKLFGIYEYGLTVRNHPLL RGFDDRYFIPQSRHTAIDDTRIYSVPSLEVLSRSEENGINITGTWDYRRIFVLGHFEYDR YTLENEYKRDRAKGADIALPQHYYPQDDDGKTPRFNWCSYAHLFYHNWLNIVYQNTPYRL QDLVPLSE >gi|290781638|gb|ADGP01000016.1| GENE 9 5874 - 7160 1495 428 aa, chain - ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 7 428 6 426 426 494 58.0 1e-139 MKNQSTYHFETLQQHAGQTADAVTGARAVPIYQTTSYVFQNTQDGEDQFALRKPGYIYSR LANPTQEVLEKRIAALEGGTAALATASGSAAIAYSIINLAGAGDEIVAAPTLYGGTFELF TETFKHLGITAHFADIDNLTSIEQAITARTKAVYIESLGNPAINIPDFEAIADLAHAHGL PLIVDSTFATPYLFRPLAYGADIVVHSATKFIGGHGTTLGGLIVENGSFDWGASGRFPEF TAPDASYNGINFAADIPDAPFVTRIRAKYLRDLGACISPFNAWLLLQGLETLSLRVERHV QNAEKIAAYLAAHPKVATVNYPSLPTSPYYALAKKYFPRGTGSIFSFTLKAGYTAARTFI DKAEIFSNLANVGDSKSLLVHPASTTHQQLSPEAQKACGITPGTVRISVGLENVTDLIAA LDKALCQV >gi|290781638|gb|ADGP01000016.1| GENE 10 7646 - 8077 484 143 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0636 NR:ns ## KEGG: Vpar_0636 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 6 133 6 129 134 83 39.0 3e-15 MSWWRDIWRQSIFLCFFIIPIPIGSYTIHNGSSAVVALAVYGVLSFIVPLCYIRSRETRF GRQDKAISVCAYIAAWLLLAGGSCGVPAVQKTWWQMSVFWQWPTIARDIVFIAVMYVFVS VTLVVAYGFSGLLSCRHDRQCRE >gi|290781638|gb|ADGP01000016.1| GENE 11 8161 - 10098 2026 645 aa, chain - ## HITS:1 COG:PH0361 KEGG:ns NR:ns ## COG: PH0361 COG1297 # Protein_GI_number: 14590271 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 15 607 5 595 626 204 30.0 6e-52 MSHTQKPEPGAPSNPSMSPHRSYEEINAYVVGWGLFFAALFSLAVGYLCLKIGQTVDAFA PVSVLAMGMAILFKRKNAFPETVHIQAIASAGTNILGGTMFILPALFILHIHGVSFAEMV IPIILGGILGVFLATAFRRYFCEEMDAAYPFPSGRAAAEVLQCNEGAKARIMVLSGILAM AYDFILNTLGWWREVLSTQTFAWGQALADKHKLLFSLDNDAALLGIGYFTGLRYAAIIAA GSFFSWFVCLPVVYYLGGSHVMIVDGQSVLLSQAPIREVFNQYVRHIGIGMLAMAGIIGL LTMSKVVGRVVKRALRDAFSGQVTVATGLLRTQQDLAMSRIGFGTLLMAVFFAIFFHITC AQTIAQTLLAFCIVLIFAFMLSVVGISSIAFTGNEPVSGMTIFMILVSAVIMSAAGMHGE SGIIAILLMAAFLCSTLAVAGNFMSELKVAYLTGATPKKMQQWQLVSILLAGVVSVGVIY LLNHAYGFTGANALAAPQANAMAAIVKPMMDGGAAPWPLYMAGAFFAVLLWMMKVPPLAF ALGTYLPMEINTPVLIGGIISYLVSHSSTDEKLNARRLSEGGTVASGFVAGGAIGSLCSA VLHIGGVRWFQETWVTSPGATYLGALTYLGLCAFIYYMAKRIKKF >gi|290781638|gb|ADGP01000016.1| GENE 12 10426 - 11751 1056 441 aa, chain - ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 7 426 8 425 439 458 58.0 1e-129 MKTAHRKMSLVQLTFVTAANMLGAGIIMLPTKLAEVGTISLLSWIITSLGSLALALTFAR CGTFSAKPGGMGGYSEYAFGRIGHFMANYAYAVSIVIANVAIAISAVGYGAGFLDTSFTP LQTCLYAIALLWLAAVLNFSGSRYSGKLSALTIWGAIIPVLGLSLIGWHWFHPHLWLASW NPHHYGYITAVGNSIALTLWSFLGLESAAVNMDAVENPQRSVPIATFISTVCVAVIYILS TNVLAGIVPNKDILNSGAPFGLAFAHMLGSTAGKVVMGMMVFSCAGSLLSWQFTLARVFK TSAQRGLFPKVFAKVTRADVPVKGMITILAMQSALAFMTISPTLAKQFELLANLAVVTNV IPYILCAGALKSILKKEHVPLAACNRNTAYFLAGVSIIYCFYSLTTTNMTTFTGGCIAAF AGWLIYVVRFTLLKRTIVEIK >gi|290781638|gb|ADGP01000016.1| GENE 13 11941 - 13122 1323 393 aa, chain - ## HITS:1 COG:CAP0078 KEGG:ns NR:ns ## COG: CAP0078 COG0183 # Protein_GI_number: 15004782 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Clostridium acetobutylicum # 1 390 1 390 392 518 69.0 1e-147 MKEVVIASACRTAIGKYGGGLKDVSAPELGSVVIAEAIKRAGIKADQVNEVVMGNVLQAA GGQNPARQAMLKAGMPVEIPAMTINKVCGSGLRCVSLAAQMIKAGDADIVVAGGMENMSQ APYAIPKARWGYRMGNGTLIDTMIKDGLWDAFNDYHMGITAENVAEQYGVTREEQDKLAY ASQKNACAAIKNGLFKDEIVPVVIKTKKGEVVFDTDEFPREGTTLESLASLKPAFKKGGT VTAGNASGINDGAAAFVIMSADKAAELGIKPIAKITSYASAGVDPKIMGTGPIPSSQIAL KKAGLTAADMDVVEANEAFAAQAAHCCKTLNLDMSKVNVHGGAIALGHPIGASGARILVT LLYALQQAKGKYGLATLCIGGGQGAACVVENLK >gi|290781638|gb|ADGP01000016.1| GENE 14 13391 - 13546 105 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968291|ref|ZP_06559833.1| ## NR: gi|290968291|ref|ZP_06559833.1| hypothetical protein HMPREF0889_0462 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0462 [Megasphaera genomosp. type_1 str. 28L] # 1 51 1 51 51 85 100.0 1e-15 MQFEVWVLKIVVRIENIVIGLAKKNEYICRGFWFNNILIVKKRTKLAGDRR >gi|290781638|gb|ADGP01000016.1| GENE 15 13798 - 14277 431 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 157 1 158 159 170 51 1e-41 VREVRVVSDENEQLGVMSIRSARQIAEERHLDLVEVAPNGKPPVCRIMNYGKYRYEQQKR EKEAKKKQKVLVLKEVKLRPNIEDHDFYVKMKAAQRFLGDGSKVKVTIMFRGREMSHPEL GRDLLIRFADELKESAHVEKEPKIEGRNMTMVMATNKAK >gi|290781638|gb|ADGP01000016.1| GENE 16 14296 - 14493 223 65 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372289|ref|ZP_03855771.1| LSU ribosomal protein L35P [Veillonella parvula DSM 2008] # 1 64 1 64 65 90 70 2e-17 MPKLKTRRAAAKRFTTTGTGKVKRMKPYKSHILESKSPKRKRNLRKATLVSKTMTEAVRK MCPYI >gi|290781638|gb|ADGP01000016.1| GENE 17 14534 - 14884 502 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227498534|ref|ZP_03928678.1| 50S ribosomal protein L20 [Acidaminococcus sp. D21] # 1 115 1 115 117 197 84 7e-50 MARIKVGVTAHARHKKIIKMAKGYRGTRSRLFKKANESVMKALFYARRDRRVKKREFRKL WIARINAATRVHGLSYSRFICGLTKAGVAVDRKMLADLAVNDAAAFAKLVEVAKAQ >gi|290781638|gb|ADGP01000016.1| GENE 18 14960 - 15574 279 204 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1548 NR:ns ## KEGG: Lebu_1548 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 202 1 202 207 70 25.0 3e-11 MDKTVNSRHRLLAAILSIEGQLHTAAAYTDLLPTVLPDTLPFLLHRAGTLQAWDSLSLCS YYADLLKSKKRNCNIIYERYLYIQSHLYPERQPPPALYLRQRAAEKQSLIHYILREELRW EAQLYRQYPRLRKKGAPLYQIHTPRPDISFELSIQGELYTYSRLTLQTLLAYITQLRTRQ RNFNKMVWQNICRISGYAYLQEEA >gi|290781638|gb|ADGP01000016.1| GENE 19 16004 - 19423 3766 1139 aa, chain + ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 483 992 109 648 1291 84 25.0 1e-15 MKTYRKLKSKKSVHWKAAAALAAAFCTLGLSGTMAAEVSNGVGHFVSVKAEGSSVTQDKN YNNDGAVGAGSVAIGQGTESNGKNSVAIGRNAGKNKPADTFKTGAEKDKTQQEASVYIGV DSGLNSSASYLLAVGAQAGAQSVGVNNVYIGTNAGKNTQGDNNIILGVGRDIPKSPIGAR RRTQTLETVKVENSVVLGYQAMAGVNDGVANMWKIRNAVTKDVIVFGTHALGNGTNTIAV GTNAKSLNSIAVGADSNSKKQSVALGEKARSMSEHSVAIGFDAYTNIDDGVALGSFSNAY RKANIGVTAQEYVQDRTHKPAYDPAAQDGLYRHTAKELQLKKAFENADTALGDDPDNETK KAVWTNAQTLYYQQSAVWSATKGAVSVGCFANGITRQITDVAAGSYDTDAVNVAQLKALD KKYAGLLQGTVSAHSGQGSSTTAGTGSMSSTTDTTSHTTSEPTLSVPSQETMVNWKNISF GKGYKNIIKGAKATGENAVAIGNGAENSGIDGITIGRDAGIAAKGDANVYVGARAGMNIQ GQENIILGEAPDKADLVRRKLDKSIVLGVKAQAGTPDSPNHASEKADTNLVVIGTSASGR GINTIAIGTLAKTLGNNSISLGTAAQADNSIAIGMKSVSNGNAVAIGTQAYSNGKNSVAF GTKAMATMAKSVALGADSQAMREAGCEDAAAVGYDPFTGKTHVQEQNASGIDPFVSTRAA VSVGAADQNVLRQIVGVAAGSEDTDAVNVAQLKALEKKMQASMTAISSKQAIPGSDGKGI KLGEGAKVTYKDGIAIGNNAWSKNKGSIVVGNNMIGRAKNVVAIGHQGGAFQEDAIAIGT TACANGGIALGTKASSQAVSAVAIGKSAYSTSQSIAIGEESTGFYQSSVAIGFEAKAHEK GTVALGSEAVSDRPANKDRAAALGYDPLQEQAHVVQPANGDREADNADSGYISTRGAVSV GDADHNVFRQIINVAAGSYDTDAVNVRQLKDLGKRVDNIRTSMQGRMDQLTAHVNDLDTQ SQSYSAGAAALAALHPAGDTSRTWNLSAAFGHAGNTNVMALGIYYRPNAQTLWSFGSSLG AKQNVINGSLSFAFGKSVHTNDMTKKVAELQAAVAKQKEELAAVKQLLVQYTSVMSSRK >gi|290781638|gb|ADGP01000016.1| GENE 20 19653 - 20351 966 232 aa, chain + ## HITS:1 COG:BS_yqeD KEGG:ns NR:ns ## COG: BS_yqeD COG0398 # Protein_GI_number: 16079625 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 55 187 29 165 208 66 33.0 3e-11 MSISAETKKKWLVKLLGAVLIVFVLGLIHAVIPHFYHTVAHYVWHRDVQGLSTYIASFGY GAVGLCMLLIVMVNAVGFPSIQFLTLNGLVFGVGPGIVISWIGEVIGIEIAFFFMRTLFR GEAKKIIQKSSKLQKLDSHCNMRTIMLGRAIPYTPNVALTALSALSRISYKDHFLANIAG KLPSVCVEVWLGHDLLQLHEHWQRFCILLVCLLAGYAVVYWVKRHKVKPMTD >gi|290781638|gb|ADGP01000016.1| GENE 21 20536 - 25530 5444 1664 aa, chain + ## HITS:1 COG:STM2199 KEGG:ns NR:ns ## COG: STM2199 COG4771 # Protein_GI_number: 16765529 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 14 175 11 163 663 90 34.0 4e-17 MIFSGRSKKQMTWGTMLSCAVFFWMTAPLTGTGQVTAAGVSTKDVYVRATAAEEEAKFNS QQVSIITAKDIEQKQAKTVEDIIFTQTGVSRTVDSMGRVGVSIRGAEPRHTLILIDGQAV MGDLAKYSGQMDEVMRIGTENVDHIEVIQGAASAKYGSDAIGGVINIITKKAAKKPQIIF NAGGMRTNGMSGMAPYSTYFLRADSGQIGKARVGVYMSKRDVMPAYAHRPPRNIYQAIEG QNLSLFDKNSLRFFGNTNNVGVTAAYKINKDHSLQVKSDHYVEDLKRTLKHTNNEDEPQQ IFRRKATRNMENVTWNGRKGNTDWTVEVNHAKINEDDVALINFSGRSQYEGKNELKYIDD IDHKQTDWKISANTQINDKHLLSYGFGYSLEKGEGSRLKGAPKTTVKKIDPWDYDKELLV EGRDAYSRQAGQAGDVIWSHVHRYKFIEDNTKVMPEWDYKYEYYGTNHEDPHSAQPLITY EEYSKYKLKDKEGSPYYNNLQDQGVSDEVYNTKYKPFRQRLEKENPGFKGSNIVGKYFEY GLSSNSVEQAAAPKLNGKRFLEEYNKRSNSVKMGWGTIKKYNFFLQDTIQADENTIFMPI IRLDHSSLFGSHVSGNLGMTYQVNHNPHRRFKVNVGTAYTEPGMGELWYHWEMFGSNPIG VGAAKMGWYWKGNPSLKPETAVNIDAGIEGESKNTYARVGVFYNRISNYMTVKYSGKFMD FAPFLSKSEKWKQAPDLIYTFDNIGRVDITGIEAEVKRYFTPTLSLKLGWTYLHPVNKSD PSSPIVDKPKHKIDISLNYDNKKSGWSGQLWGNYYVDMYDSHTLANKGNYWIGDVDPDSA IYKKAEYQKKTYGIWNVMVQKSINADAKIYFGINNIFDHHDDDRALQSRVFRWGLNVKFG GTAAKVHKKVVRKSLQKVKLQDFIERPEGADTSALVFNGMYQMRWNSNGGINRAVPPFRK NGMTAENALRNTKDLSEHGFEQRLRFGISGTLGRDTHITVSGSATAENRPDSKYNVAANR GLTKIKLDKADITKTIKKWDVSVGRLQENIGVTGYLFGREFDGVRTVWTHNRTQIRAGYG SFAHSTGVSDSAYTHLEYGEFYRVPTVSEFMGLNRDEWGIGADTKQLAGANPALHDKEDN TYTQGEPGSPDDVYKRYYAQRVKNGEKINVYFYQQLRDINADPTLSAVDKRSKTKELLLR FNTIVNQSYGKELAGRTVNLEPKLASLVYSIKNKKTGDEYYVTTDSDDIVGDGTVKIPIF GKDVDALLREPKQWLQQNKEKVYDACEQYSKELLQAQLQDWIKNYNGTLGVLGKVQKKEG QQYTDISAAVKQESLADYEINTVEYSADLLDRILARKFTPPKEKDEKYDAMLTEFESAYI GEVEGALRNLDAGSKAPRSKFEKAIGKPLLSKGLIVQKDEIPVINGGAFLQIKRQVTDRL GVQAWYFRSLHDHQEMVTTAKQPKRILEHKTDEHGIGYIFDATPDLPTEQQQETRAFSTI ANIIGIGAKWQMGPDVSLSLDYGRNYTDYGRFMNGSSIFEHTKGTADFRVLGRNIGSTPS FRVVRLDIGRSDASQEGSWNFFADYKSFGHGAFFGGTGAEGVPDRYLDGISSFTVGAGYV PKKDLLLQGYFTFDAKGTRQRDTIYGAEHFTLGDYSRIQLTYKF >gi|290781638|gb|ADGP01000016.1| GENE 22 25622 - 26587 969 321 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968299|ref|ZP_06559841.1| ## NR: gi|290968299|ref|ZP_06559841.1| hypothetical protein HMPREF0889_0471 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0471 [Megasphaera genomosp. type_1 str. 28L] # 1 321 1 321 321 623 100.0 1e-177 MTQLLHWGGSAVTLIFFIALCYSLFTAWRKRRRENRRRQDLQTKTHTKVKQVHQYDIKPV KGNYRYPLEPVATLRRPVHTTIGLDLETATEQPYSIALMALTFYTEETCKAQRYFYVQPP ENDLHCLRRKDITWSSLRLADTFDEYWQAGLKDCFSQGVLVGWNMTEKLGAVAHALKIYG LPMISCRYIDVNDIRRDLYTGVPKTPTATARAVGVTCPDEDIPLTRAHLAVQILQTVQRD YPLYLPRIRYVGQAPDIQQRSAAVIAAAHHEPVGIREIFTTTPPDRDLLQTLIKQNYLTY QAENDTYYATETGLAFAYTCQ >gi|290781638|gb|ADGP01000016.1| GENE 23 26822 - 27310 507 162 aa, chain + ## HITS:1 COG:SA2070 KEGG:ns NR:ns ## COG: SA2070 COG0521 # Protein_GI_number: 15927855 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Staphylococcus aureus N315 # 10 162 13 168 168 121 39.0 6e-28 MVTKSTRQPLRTAILTISNSRTFSDDTNGLMIQSCLTNYGHQVVDYAIVKDDKAAILRHI HEWVCSVDMIITSGGTGLAKRDVTLETLVPLMEKTIPGFAEMVLFFAYRKACGLEALTYR AAAGLIHQCPVFALPGLPSLIKISMEKIILPEIEHLYGEIKK >gi|290781638|gb|ADGP01000016.1| GENE 24 27459 - 28112 793 217 aa, chain + ## HITS:1 COG:alr3338 KEGG:ns NR:ns ## COG: alr3338 COG0406 # Protein_GI_number: 17230830 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Nostoc sp. PCC 7120 # 2 203 232 439 449 125 37.0 6e-29 MITLYLVRHGETDGNVKRWYQGATDIPLNARGREQAEALGRYFQDFPFQAIYSSPLSRAK ETAEIVARPHGLTVRTYEALREIDFGAWEGHTYEEIRELWPGEIEAFYRSDGMMKARGGE SFCDVAQRTVEQIHRLMEHHADGDKVLIASHGAAIRCMLFGLLGLELSRIWCFQQYNTAF NVVEYYGERSVATLINCTNHLVGTSGCQTNWTNTNRL >gi|290781638|gb|ADGP01000016.1| GENE 25 28122 - 28838 496 238 aa, chain + ## HITS:1 COG:lin2436 KEGG:ns NR:ns ## COG: lin2436 COG1187 # Protein_GI_number: 16801498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Listeria innocua # 5 230 1 226 233 209 48.0 5e-54 MAKRLRLDKWLSHSGQGSRKEVRDLCRQGRVLVNGEICRDGAQLVETGVDRVQVDRQPVC YEEFYYIMLHKPRGVISATTDAACRTVLDFLPPPCRTGGVFPVGRLDKDTTGLLLLTNDG VWAHRILSPKKHCYKVYEATVSGSIPEDLTVRFASRIVLADGTVCLPARALRIDGQTVEI TVYEGRYHQVKRMCAAVGLQVLSLHRHKIGALGLDPALSPGQWRKLTEVERELPFVNK >gi|290781638|gb|ADGP01000016.1| GENE 26 28900 - 29961 1087 353 aa, chain + ## HITS:1 COG:SA1360 KEGG:ns NR:ns ## COG: SA1360 COG0006 # Protein_GI_number: 15927110 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Staphylococcus aureus N315 # 5 352 3 352 353 262 42.0 7e-70 MIQERVKNLRAYMATQHADGVVILQPENLRYFSDFTGGEGALVVTHATAELWTDARYTEQ AALQSGTVYAVKNHEGKLAAAISGSLAAAGQVLYEQQVLTHYMYEALAARSQGRFVGVDL TPLRAVKTPAEIAATRKACAIADAAFAKVLPRLHPGMTEREAAAQLECEMLLAGSEEKSF TTIVASGKRSAMPHGTATDKPLETGDFITFDFGAVWNGYHSDMTRTIVLGHASQEQKEFY RLVRESQQLGLSLIKPGMNCREADAEVRAFLTERGMGKYFTHSLGHGTGLEIHEAPILSP RSTATLRKNMIVTVEPGLYIEGKYGVRIEDSLAVTATGCEVLTQTSKELMELF >gi|290781638|gb|ADGP01000016.1| GENE 27 29976 - 30533 785 185 aa, chain + ## HITS:1 COG:BH2799 KEGG:ns NR:ns ## COG: BH2799 COG0231 # Protein_GI_number: 15615362 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Bacillus halodurans # 1 185 1 185 185 230 57.0 9e-61 MITSNDFRPGVTIEIDGQVWQVVEFQHVKPGKGAAFVRAKIKNLETGAVVERTWNAGEKV QDGHVDRRQMQYLYENDGMYCFMDNETYEQIELNRDNLGDAANFLKEEMTVSVMMFKGKV IGIDLPAAVELKVIETDPGVRGDTATGGSKPAKLETGYVVKVPLFINEGEVLQIDTRTGQ YIGRA >gi|290781638|gb|ADGP01000016.1| GENE 28 30609 - 30998 568 129 aa, chain + ## HITS:1 COG:BH2786 KEGG:ns NR:ns ## COG: BH2786 COG1302 # Protein_GI_number: 15615349 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 5 118 12 125 132 60 27.0 7e-10 METTETTIFGDIHISQRVISLLAAGAARRIPNVADLEATLTETAARKMGRTQHSYGVETA ISGQDIEITVRIVVVYGCRIPDVALAVQKAVKETVEQMTGCQVTAVHIAVQAVVFSSVGI GGAEHGSEQ >gi|290781638|gb|ADGP01000016.1| GENE 29 30982 - 31287 335 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968306|ref|ZP_06559848.1| ## NR: gi|290968306|ref|ZP_06559848.1| hypothetical protein HMPREF0889_0478 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0478 [Megasphaera genomosp. type_1 str. 28L] # 1 101 1 101 101 127 100.0 3e-28 MDRNNERFSYVVRSAAVADVVQAAVKTVSYVALCDTRRVRVRQRENEAVVTIRIAVQEGK SVRTAALQVQQAAVRALQSLPTATRWTVQVNVEDLFPEAAG >gi|290781638|gb|ADGP01000016.1| GENE 30 31297 - 31722 581 141 aa, chain + ## HITS:1 COG:SPy1818 KEGG:ns NR:ns ## COG: SPy1818 COG0781 # Protein_GI_number: 15675648 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Streptococcus pyogenes M1 GAS # 2 135 8 140 150 70 34.0 1e-12 MSRHRERQEALEILYSREFHAPDDIQYAEQEIFDHTAAEARALTPERRAYCMYLVQTVGA RKEELDRIIGSLAKDWDIQRLNYTEKNIMRLALCEMKYPKEPVPTAVVLNEAVLLAKEYC SSEAARFVNGVLGTYSRMKEE >gi|290781638|gb|ADGP01000016.1| GENE 31 31719 - 32666 918 315 aa, chain + ## HITS:1 COG:XF0435 KEGG:ns NR:ns ## COG: XF0435 COG0533 # Protein_GI_number: 15837037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Metal-dependent proteases with possible chaperone activity # Organism: Xylella fastidiosa 9a5c # 5 312 4 316 348 92 31.0 8e-19 MKAFLGIDTSCYTTSLCVVDEKFQILADARKILKVPSGERGLSQANMIYQHTRNLPELFE RLQPIFQQYELAGVGVTGQPRRRPESYMPAFLPGLGYARSIAAMLGIRVYIISHQENHML AVLRAVGNIATAPFFALHVSGGTTELLHVRPDAQGLEITCIGGTSDLSAGQFIDRVGVAL QLPFPAGVHVERLAVAEASTVVGAPVFCKDGYISFSGPESQVQRDIQAKKRTPSGCCSHT LATVWRGLEQLLDTAAAQHMTQLVAAGGVMANGYLRRQMAKYCQERQVRLLLAPPGYSTD NGAGAAFWAAWRERS >gi|290781638|gb|ADGP01000016.1| GENE 32 32668 - 33873 1062 401 aa, chain + ## HITS:1 COG:lin1398 KEGG:ns NR:ns ## COG: lin1398 COG1570 # Protein_GI_number: 16800466 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Listeria innocua # 4 389 7 437 450 222 32.0 1e-57 MESISVTDVVKRLKQKVEGDNQLQHIVMEGNIIGLKRASTGHYYMNLHDAYSSIHAVFFR GRAGQAMAHVREGDKVIVVGSLNVYEKGGSVSFLIERLYSQGMGSLQVQLAEQKKRLAAA GYFDAAHKQPLPRFPWHIGVLTSHTGAVLHDIRKIASERNPYITVHLYPIPVQGESAVPE IAAALRKAGANRTLDVLILARGGGSMEDLWCFNHSEVVRAIYETAVPVITAIGHETDTTL ADYAADVRAATPTHAAELAFPSFADLQLLLTQLTETAIQRMQERQERYRHSLRQAIAAIR PDRYREYLTLRRQQAISRIALAQRQWHVCQMRKRGDLQTLAARLAGLNPENLGRRGYGQV FKDGQPVASIQSVQTGETLQIQVLDGIVETVVKGVKPYGKR >gi|290781638|gb|ADGP01000016.1| GENE 33 33860 - 34108 344 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968310|ref|ZP_06559852.1| ## NR: gi|290968310|ref|ZP_06559852.1| exodeoxyribonuclease VII, small subunit [Megasphaera genomosp. type_1 str. 28L] exodeoxyribonuclease VII, small subunit [Megasphaera genomosp. type_1 str. 28L] # 1 82 1 82 82 120 100.0 4e-26 MAKGSEQLKNFEANFSKLETLVNELEATDLTLKESLDIYEKAMKVSNACVQALDYAQQRA TELANTRPVLTERVRESDDESV >gi|290781638|gb|ADGP01000016.1| GENE 34 34095 - 34982 1166 295 aa, chain + ## HITS:1 COG:slr0739 KEGG:ns NR:ns ## COG: slr0739 COG0142 # Protein_GI_number: 16329282 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Synechocystis # 7 293 15 300 302 252 49.0 5e-67 MNPCEAYLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEAL GKESSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLT FAFELLARQRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRG KTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGKPVGS DVKNNKATYVTLFSLDKAKQLAQESAQQAVAAVAPLGASARFLRDLPEYLLVRVK >gi|290781638|gb|ADGP01000016.1| GENE 35 34999 - 35796 769 265 aa, chain + ## HITS:1 COG:CAC2076 KEGG:ns NR:ns ## COG: CAC2076 COG1189 # Protein_GI_number: 15895346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Clostridium acetobutylicum # 2 264 3 264 267 295 54.0 8e-80 MQSKERLDILLTERGLAESREKAKAAIMAGLVFVENRRVDKAGTKFSEDVRITVKGNAVP YVGRGGLKLAKAISYFSLDLTGKCMIDIGASTGGFTDCALQNGARKVFAVDVGYGQLAWK LRTDPRVVNLERTNIRYIDPSMIGEAADFISIDVSFISLLKIMPAVVPLLRTDGTMVTLV KPQFEAGREYVGKGGIVRDRAIHYQVLRRIIAGFEACRVYPIGLTFSPIKGADGNIEYLL YSTRIPSTPVSIERLTAVVNESHEM >gi|290781638|gb|ADGP01000016.1| GENE 36 35808 - 36680 839 290 aa, chain + ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 42 286 40 285 292 151 33.0 2e-36 MRIGIFPNVTKRECAPWVQKLLAGCRRHGVEALLPAYVAESEQTIYREIAAVHYHPFSEL MNTIDFAFVLGGDGTILKLARSFALAKVPVCAVNFGSLGFLMEVEPEEMEARLEAMLQGL YFLEERTLLHSELCCADGSVQELPTALNEIVVAHGNVGKMIRLDMSINGHFVQQYPGDGM IVSTATGSTGYNFSGGGPIVAPQVKCLMVSPICPHLLLKMPLVLGEDAVITFSAAHSRNA VRISIDGMRDQELPRSVTLRVKRSPYTLQMIRFDENYFYTNLFTKMTGRK >gi|290781638|gb|ADGP01000016.1| GENE 37 36682 - 37254 508 190 aa, chain + ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 5 188 3 184 188 125 35.0 5e-29 MSYTLHNAVSLCHLLLESYVADASIVVDMTCGNGHDTLFLRERLAPRATLYAFDIQEPAV QATKKRLQQAGKWDEQVILRQGSHEKLIHMIDAEIDICVFNLGYLPAGNHNIHTEFAITL KALKICLHKLSKKGMIIMAAYPGTRAGAEEAMGVAEFLQQLPQEQYHVSLWQPLNQIHEP PILYIVQRRS >gi|290781638|gb|ADGP01000016.1| GENE 38 37294 - 37749 692 151 aa, chain + ## HITS:1 COG:BS_ahrC KEGG:ns NR:ns ## COG: BS_ahrC COG1438 # Protein_GI_number: 16079481 # Func_class: K Transcription # Function: Arginine repressor # Organism: Bacillus subtilis # 5 149 6 149 149 123 43.0 1e-28 MKRFRYSKIKEIVQSRPIETQEELAKALQEEGIEVTQATVSRDIKELMLIKVPTSDGHYR YALSPEQNLLMSKNRMVRLFQDSIIRVDAAVNQIVIHTLPGSANPVAAAIDHARWENVIG TLAGDDTILIITNGEEAVPQLVKLILSLMKE >gi|290781638|gb|ADGP01000016.1| GENE 39 37757 - 39463 1742 568 aa, chain + ## HITS:1 COG:lin1405 KEGG:ns NR:ns ## COG: lin1405 COG0497 # Protein_GI_number: 16800473 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 559 1 558 563 320 34.0 4e-87 MLQSLHIRHFALIEELHIHFGDGLTIFTGETGAGKSILLDAMGMLAGKRASASFVRQGTE SFVVEGAFFFSNENEVLQQVLAANHIEAEDGQLVISRQFRRNGRGTTLINGTLVPLTAVK QIGEQLLDIHGQYDNRLIFDAAYHVEILDSLTPALTEARRAYDLAYKTWARIVKEIKTLQ KEESEKARLLSVLEFQIKEIEAAQLREGEDDELEHHIKTAAHSEHIKNNIQDMLFAFEGG ERQKGLLEQLETVQRVLLKTASYDPSFQETATRLEALIYEVADVHDSLVSYAEAFDFDER ALDRMQSRLAVIEKLKRKYGFSIPHILAFLARSQKEYERLEESESVLASLQKKEREAAQT AKEKAAALQVLRLQAAKDFQQQMTATLKELGMARSRIAFHIEPMREITPLGAATVALYFS ANAGEAMMPLVKIASGGEISRIALALKSVSGCTQAEKTMIFDEIDVGISGQTGVQVAKHI RKLCQDGQIFCITHLPQTAAAADKHYFIYKQEIEGRTVSQVKALTAEEHVQEIARMFGGD DICEAGLTAARGLIAKSKQSDGETAGGS >gi|290781638|gb|ADGP01000016.1| GENE 40 39530 - 40327 1179 265 aa, chain + ## HITS:1 COG:lin2021 KEGG:ns NR:ns ## COG: lin2021 COG0289 # Protein_GI_number: 16801087 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Listeria innocua # 2 265 1 262 263 223 46.0 4e-58 MIRVVVNGADGRMGSEVVKAVTADAELALVGGVSLTHVGEDIGVAAGMQALGISMGNNLA AVLDTCHPEVAVDFTTPDAIYENAEICLTKGVHMVVGTTGLTAVQRERLGKLAAANGVGL FIAPNFSIGAVLMMRFAAEAAPYLPNVEIIELHHNNKLDAPSGTAILTAERVAAARKQAG AAAAPDHTQESLRGARGATVEDIPVHSVRLPGYVAHQQVLFGGQGELLTLRHDSLDRKSF MPGVLLAIKKVSGHTGLTFGLEHYL >gi|290781638|gb|ADGP01000016.1| GENE 41 40349 - 41383 1203 344 aa, chain + ## HITS:1 COG:BS_asd KEGG:ns NR:ns ## COG: BS_asd COG0136 # Protein_GI_number: 16078738 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Bacillus subtilis # 7 344 7 346 346 339 52.0 5e-93 MKKKPVVAILGATGAVGQEFIRLIEERKFPYSALKLLASARSVGKKMAVNGVEYAVEEAT AASFAGVDIGLFAGGSISKVLAPEAVQRGCVVIDNSSAFRMDPQVPLVVPEVNAADIALH KGIIANPNCSTIIMLMALKPIYDLSPITKIVVSTYQAVSGAGKEAIEELREEVSAYMRGE PMMPKILPTKSLPVHYPIAFNLIPHIDVFLDNAYSKEEMKMVHETHKILHDHTIAVSPTT VRVPVFRSHAEAIYAETVTALNVEDIRNAIQQFPGVQVQDDLEHMQYPMPLYTSEKYDCY VGRIRKDLFNPKAVNLWVSGDQIRKGAALNALQIAEYMLAHNML >gi|290781638|gb|ADGP01000016.1| GENE 42 41404 - 42291 894 295 aa, chain + ## HITS:1 COG:lin1474 KEGG:ns NR:ns ## COG: lin1474 COG0329 # Protein_GI_number: 16800542 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Listeria innocua # 2 289 1 289 293 271 48.0 8e-73 MVQLGNVITAMITPFYEDGSVDYEGAVQLAQDLCQNGSDSVLLAGTTGEGATMTEEEKLT LFRAVRTALPPHKRVIANVGSNNTAQTVAFAQAAEKTGVDALLVITPYYNKPNQAGCYAH FAAVAKAVTAPVILYNVPGRTGGKLEASTVVRLARAFKNIVGIKEAGGDLSAVTVMARDT DEHFSVYSGEDNLTLPILAVGGCGVISVASHLIGRELQTMIEAYKAGEVQKACMLHQTYL PVLNGVFCTVNPIPVKTCCQILGRPSGPFRLPLVEASVEEKQFLTRLLQQFHIIK >gi|290781638|gb|ADGP01000016.1| GENE 43 42396 - 42653 314 85 aa, chain + ## HITS:1 COG:TM0317 KEGG:ns NR:ns ## COG: TM0317 COG2217 # Protein_GI_number: 15643086 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Thermotoga maritima # 9 80 11 82 726 60 43.0 6e-10 MGFLSGLFGSKAEGTKKHICITGMTCENCVKHVETALKGVEGVKQVRVNLSSGQAQVVVA AQVTNEALTQAVSEAGYTVTRISDD >gi|290781638|gb|ADGP01000016.1| GENE 44 42762 - 43619 946 285 aa, chain - ## HITS:1 COG:CAC3466 KEGG:ns NR:ns ## COG: CAC3466 COG0583 # Protein_GI_number: 15896705 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 268 1 268 292 172 33.0 6e-43 MDTSTLRTFIALSQIKNFTKTARQLYIAQSTVTNRIRDLEKELGVLLFTRNRKQVELTSA GEKFLPYAQQLIRIETAALQDVHISPHDTHPIHIGTTNTIYECHLQKRLHVYLQTASHAS LHITIGHTPDMLAQLQDHVFDAVFSFNPLLRDGYISLPYRTDTLVLVCAYNRTTYAQGIR KNELQHIDYLFCNFALQGIGLYIRDLFPKHHRFPLEIDNSTKLPHYVAAGFGYTFLPQSL IEDTVACKKLRVIPLLDFAAPKVDSYYITRSPSTVPDTLTRILWE >gi|290781638|gb|ADGP01000016.1| GENE 45 43765 - 45018 1360 417 aa, chain + ## HITS:1 COG:MA0726 KEGG:ns NR:ns ## COG: MA0726 COG0019 # Protein_GI_number: 20089611 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Methanosarcina acetivorans str.C2A # 1 417 1 416 420 567 62.0 1e-161 MNSKTVPFTKEQIQHIIADYPTPFHIYDEQAMIDNVRQFLRAFSWAPSFKEYFAVKATPN PYIMKLLKAEGVGADCSSMAELMLCEKVGITGRDIVFSSNDTPYAEYQKALAMGALINLD DISMIAYLEQHASLPERICARYNPGPLLQEGNAIIGKPEEAKYGMTREQIFEAFRILQAK GVRHFGLHTMVVSNELAVQGLIHTAKMMFELAADVQKHTGITVEFIDFGGGIGLPYRPEE SFVSYDELSQGIRQHFETIMKPHGLGQVQLAFECGRAITGPYGYLVTTAIHHKHIWKEYI GVDACMANLMRPGMYGAYHHISVMGKEHLPKDHIYDISGSLCENCDKFAVDRALPEIEDG DILVIHDTGAHGHSMGFNYNGKLRSAELLLQKDGKVRQIRRAETLEDLFATLDFSEL >gi|290781638|gb|ADGP01000016.1| GENE 46 45141 - 45656 557 171 aa, chain + ## HITS:1 COG:SPy1427 KEGG:ns NR:ns ## COG: SPy1427 COG1827 # Protein_GI_number: 15675342 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 172 173 119 39.0 2e-27 MDNAARRNEIINILSRSQKPVNGTVLSQRCAVSRQIIVGDIAILRAEGTEIISTPRGYQL LKVEEKGRRKIFVCRHGMDKMRAELEAIIDNGGIVENVVVEHEVYGTLEAKLNLRSRRDL QHYLSLMLESGAEMLCCLSGGVHTHAVRADTEEELEVIRQALEELKILYHG >gi|290781638|gb|ADGP01000016.1| GENE 47 45750 - 47066 1608 438 aa, chain + ## HITS:1 COG:BS_yceI KEGG:ns NR:ns ## COG: BS_yceI COG0477 # Protein_GI_number: 16077364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 17 435 11 400 400 360 48.0 2e-99 MILRRLEELPVSSFHYKLLGVAGLGWMFDSFDTGLIAFVLPVLAKEWHLAPPQMGLIGSI GLAGMALGAVVSGTMADRWGRKNVFSFTILLYSLATGLCAWAPTYHSLLLCRFLVGFGLG GELPVAVTLVSEYAPARVRGRFIVLLESFWAVGWIGAACIAYLFIPHYGWRLTFLIGAIP ALYIFIIRLHMPESVRYLLSKGKREAAEQIVSTLETALHVERTTGMTDAEADVPEVKQSF RTLWSPSYRVRTILLWLVWFGIIFSYYGIFMWLPSFVFKQGFAVIKTFEYVLMMTLAQLP GYFSAAYLVERWGRKYTLAIYLLGSGIAGYFFGHAGSVAALISAGAIMSFFNLGAWGVLY TYTPEQYPTAIRAMGSGWAAGFGRIGGIVAPLLVGYLLSESVGMNGVFYLFAAVFCIIAA LILLLGRESKKKALEDLA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:37:53 2011 Seq name: gi|290781600|gb|ADGP01000017.1| Megasphaera genomosp. type_1 str. 28L contig00042, whole genome shotgun sequence Length of sequence - 41908 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 16, operones - 11 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 132 - 207 78.0 # Trp CCA 0 0 + TRNA 244 - 320 78.6 # Arg ACG 0 0 2 1 Op 2 . + CDS 2018 - 2809 175 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein 3 1 Op 3 4/0.000 + CDS 2901 - 5510 3343 ## COG0013 Alanyl-tRNA synthetase 4 1 Op 4 6/0.000 + CDS 5547 - 5807 468 ## COG4472 Uncharacterized protein conserved in bacteria 5 1 Op 5 . + CDS 5810 - 6235 588 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 6252 - 6304 1.1 + Prom 6276 - 6335 13.5 6 2 Tu 1 . + CDS 6355 - 6675 525 ## gi|290968331|ref|ZP_06559872.1| conserved hypothetical protein + Term 6710 - 6752 2.7 + Prom 6693 - 6752 1.7 7 3 Op 1 9/0.000 + CDS 6776 - 7681 998 ## COG0583 Transcriptional regulator + Prom 7710 - 7769 5.0 8 3 Op 2 . + CDS 7799 - 9004 1521 ## COG0477 Permeases of the major facilitator superfamily + Term 9089 - 9130 9.1 + Prom 9056 - 9115 1.9 9 4 Tu 1 . + CDS 9149 - 9673 515 ## PROTEIN SUPPORTED gi|227371369|ref|ZP_03854853.1| sigma 54 modulation protein; SSU ribosomal protein S30P + Term 9701 - 9754 16.7 + Prom 9765 - 9824 3.7 10 5 Op 1 4/0.000 + CDS 9853 - 10542 660 ## COG2384 Predicted SAM-dependent methyltransferase 11 5 Op 2 . + CDS 10527 - 11648 1314 ## COG3323 Uncharacterized protein conserved in bacteria 12 5 Op 3 . + CDS 11660 - 12307 888 ## COG0352 Thiamine monophosphate synthase + Prom 12711 - 12770 5.2 13 6 Op 1 . + CDS 12829 - 14052 1695 ## COG0527 Aspartokinases 14 6 Op 2 . + CDS 14062 - 14361 437 ## Vpar_1125 hypothetical protein + Term 14371 - 14412 4.1 15 7 Op 1 1/0.000 + CDS 14416 - 14793 413 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 16 7 Op 2 . + CDS 14805 - 16481 570 ## PROTEIN SUPPORTED gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 17 7 Op 3 . + CDS 16478 - 17620 948 ## COG0860 N-acetylmuramoyl-L-alanine amidase + Term 17628 - 17684 9.2 + Prom 18098 - 18157 5.0 18 8 Tu 1 . + CDS 18190 - 19221 1296 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 19277 - 19308 4.1 19 9 Op 1 . + CDS 19330 - 20853 1564 ## COG0696 Phosphoglyceromutase + Prom 20856 - 20915 4.9 20 9 Op 2 . + CDS 20935 - 21396 535 ## COG1959 Predicted transcriptional regulator + Term 21427 - 21471 9.1 + Prom 21469 - 21528 6.8 21 10 Op 1 10/0.000 + CDS 21573 - 25130 4334 ## COG1196 Chromosome segregation ATPases 22 10 Op 2 . + CDS 25133 - 26074 542 ## PROTEIN SUPPORTED gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 23 10 Op 3 . + CDS 26172 - 26984 852 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family + Term 27013 - 27049 8.2 + Prom 27069 - 27128 5.8 24 11 Tu 1 . + CDS 27151 - 28590 1700 ## COG4690 Dipeptidase + Term 28604 - 28653 4.1 + Prom 29231 - 29290 7.0 25 12 Op 1 11/0.000 + CDS 29372 - 31624 2520 ## COG1882 Pyruvate-formate lyase + Term 31637 - 31672 6.5 26 12 Op 2 . + CDS 31685 - 32524 986 ## COG1180 Pyruvate-formate lyase-activating enzyme 27 12 Op 3 . + CDS 32539 - 33288 982 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 33330 - 33374 10.5 - Term 33318 - 33362 10.5 28 13 Op 1 . - CDS 33380 - 33640 199 ## gi|290968354|ref|ZP_06559895.1| hypothetical protein HMPREF0889_1338 - Prom 33683 - 33742 10.3 29 13 Op 2 . - CDS 33788 - 34441 663 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 34492 - 34551 7.6 + Prom 34532 - 34591 7.0 30 14 Op 1 2/0.000 + CDS 34634 - 36160 1869 ## COG1492 Cobyric acid synthase 31 14 Op 2 9/0.000 + CDS 36163 - 37116 585 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 32 14 Op 3 . + CDS 37216 - 38283 1054 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase + Prom 38367 - 38426 11.3 33 15 Op 1 . + CDS 38495 - 39826 1591 ## COG1114 Branched-chain amino acid permeases + Term 39841 - 39879 9.3 34 15 Op 2 . + CDS 39895 - 41298 1740 ## COG0531 Amino acid transporters + Term 41313 - 41355 12.6 + Prom 41399 - 41458 9.7 35 16 Tu 1 . + CDS 41517 - 41907 321 ## gi|290968362|ref|ZP_06559903.1| Hep/Hag repeat protein Predicted protein(s) >gi|290781600|gb|ADGP01000017.1| GENE 1 1027 - 2109 1145 360 aa, chain + ## HITS:1 COG:BS_ykcC KEGG:ns NR:ns ## COG: BS_ykcC COG0463 # Protein_GI_number: 16078354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 13 314 8 310 323 257 41.0 2e-68 MDAFTRENKQLLSIVVPVYNEQLNIEKFYEEVHTVVPTLHMDYELIFVDDGSQDTTPLLL SRLAQQDGHVRALILARNFGHQLAITCGMDHAKGEAIITMDGDLQHPPAMIPALVQQWRE GYDVVQTVREATADAGRFKRLTSKWYYVLLNALSPVHITPGGSDFRLIDRRVLQTFLLFR EHDRFIRGMIGDIGYRQTKLSFVAPKRFAGTSKFSLRKMVHFALDGITAYSKIPLRLALY TGVISGLISVLIIFHVLYCKVAGEAIPGWATSMVVVCLVGGLQLIFLGIIGEYIGRIFQE VKRRPLYWLRAELGSGTLRKNGAEDGKGNENVAQDRYSGNGGVVDNRDFRECRDAVDRRQ >gi|290781600|gb|ADGP01000017.1| GENE 2 2018 - 2809 175 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 143 251 240 348 348 72 37 5e-12 MWRRIGIAGMAVWWTIGISVSAVTPLTVGSSGRDVLMIQRQLRKIGYNIRDDGRYSPQTA AAVADFQRKRQFAVSGIVGAQTYYVLTGKRTVSAAGDVVPEPERRNIGGYKFTAHSGNGS RGAVFATESVSLSPAYAAWCRQLLTSAYQYLGVPYVPGGSSPNGFDCSGFTKYVFSHCGI SLPRQADAQFQVGMEVARERLSPGDLVFFSTYAEGISHAGIYVGNNQFISATTSSGIRVD RLDSAYWAARYVGAKRIYGQDIS >gi|290781600|gb|ADGP01000017.1| GENE 3 2901 - 5510 3343 869 aa, chain + ## HITS:1 COG:BS_alaS KEGG:ns NR:ns ## COG: BS_alaS COG0013 # Protein_GI_number: 16079794 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Bacillus subtilis # 1 857 1 867 878 807 50.0 0 MKYMTGNEIRKAYLEFFKRKRHLQLHSFSLIPENDPSLLLIGAGMAPLKPYFTGKLVPPS PRVTTSQKCIRTGDIDNVGRTARHHTFFEMLGNFSFGDYFKKEAISWAWEFLTEVLELDT DKLYVTVYPDDTEAYGYWHTVIGLPEERIFKCEDNFWEIGEGPCGPDSEIFYDLGAERGC GKPECTVGCDCDRYLEIWNLVFSQYNRTAEGKYEPLAKKNIDTGAGLERLASVIQQKESN FETDLIFPIIEEVITLCHGDYTDPQQKVAMKVIADHIRAITVMISDGILPSNEGRGYVLR RVLRRAVRFGRLLGIRQLFLSGLVETVLAIMGEEYPELREHEALIKKVINTEEKQFSETL VQGMELLDSLLAKAGTAKTLSGQEVFKLYDTYGFPVELTEEIAAEQGVTIDMNGFAAAMK EQQERARAARADVAAKVLTPDTTSLDRQTLQYAEGVTTATIVMLGKDGQEAEAVHDGETI TVILDRTPFHAEGGGQLGDTGVLTAHGGKAVVTDTKALPNGIIYMIAGVMEGSLKKGETV TVAVDTERHAALARNHTATHLLHTALRQVLGNHVNQAGSLVTPDHLRFDFTHFSPVTAAE LREAEQLVNREILKNTPVMVTEMNREEAKQKGATALFGEKYGDVVRVVSIGDFSCELCGG SHVKSTAEVGTFRIISESGTGTGVRRIEAITGAAALAKAQAEAQILAQAAAVLKVKPESL VTKLTQLAEELKITEREVQRLKKDAAAAAVDRLAATTQHYGSVAVSAAVAPADDMDGLRT FADLLLDKQGGGVVLLGMVHDGKVNFVCKVAKADTKKGLHAGKIIKAAAQAAGGNGGGRP DMAQAGGKEPEKLEAALRAGCEVVTQLLS >gi|290781600|gb|ADGP01000017.1| GENE 4 5547 - 5807 468 86 aa, chain + ## HITS:1 COG:L141485 KEGG:ns NR:ns ## COG: L141485 COG4472 # Protein_GI_number: 15672124 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 86 1 86 88 85 47.0 2e-17 MAVKDETMIVRTRNEEQSVASMILEDVYHALVEKGYNPVDQIAGYLLSGDPAYITSHHNA RSNIRRLNRDELLEELIQSYVKQKGL >gi|290781600|gb|ADGP01000017.1| GENE 5 5810 - 6235 588 141 aa, chain + ## HITS:1 COG:BH1269 KEGG:ns NR:ns ## COG: BH1269 COG0816 # Protein_GI_number: 15613832 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Bacillus halodurans # 1 136 1 137 140 122 49.0 3e-28 MRILGLDIGSKTIGVACSDALGITAQGITTIQRKTAQDDWQRLQALATERRVTRMVVGRP RHMNGEDSENVKQIEAFITYLKRQMPAMEFVYWDERLTTMMARQVLMAGGVRREKRKQFV DKMAAILILQNYLDAQGNTLL >gi|290781600|gb|ADGP01000017.1| GENE 6 6355 - 6675 525 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968331|ref|ZP_06559872.1| ## NR: gi|290968331|ref|ZP_06559872.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 106 1 106 106 160 100.0 4e-38 MSILACHTGKMTEEWEEVPVIVMVDEDGNEAYFTEEVQVEYDGKAFSVLVPITEDGVVKE EDDAVVVRVEKEQGEDVFLPPTEAEYIGVTALLETMDETEESDSFC >gi|290781600|gb|ADGP01000017.1| GENE 7 6776 - 7681 998 301 aa, chain + ## HITS:1 COG:CAC0768 KEGG:ns NR:ns ## COG: CAC0768 COG0583 # Protein_GI_number: 15894055 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 4 290 1 288 296 248 43.0 1e-65 MAELPSIQQLKNFITYGKYQNFTSAARAANITQSAFSFQMKRLEELVGIQLIERSNRGSH LTKDGEMFYERIAPLVSDLETCLCDMRALNGEMQTLAVGTMSSLGDVQMNRHLAYFQKNH RGAALRVYNKEARELLRWLSEDKLDVISLFDLPSLDISAYEKAFFCNENLVYYAPHIEDL QGPITADIAASNPLAQYSPQYVMHDYLDHYFSVYSSVRPMTQAWFSTPYAIMNYCQQNRM GSLLPKRFLQAMGIERGYYDVIPPITLPCYLLYKKTNPNYSAIRLFVSYIQETYHVYERQ K >gi|290781600|gb|ADGP01000017.1| GENE 8 7799 - 9004 1521 401 aa, chain + ## HITS:1 COG:lin1217 KEGG:ns NR:ns ## COG: lin1217 COG0477 # Protein_GI_number: 16800286 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 3 397 2 395 401 393 56.0 1e-109 MAEKSLWNKDFLLDTGINFIVFLIYYLLMVIIAVVAKEQLHATLGQAGLASGIFIVGTLV ARLQFGKEIELYGRKRTLYGGTIFYLITTLLYFYMPSLGFMFLVRFLNGLAYGIVSTATN TIVANCIPVSKRGQGINYYGLSTSLAAAIGPFLGMLLMLVANFRIIVGICCVLVLICLIG NFFLHVEEISLTEEEKARMKRVSLENYVEPRVILISFVAFLMGFSYSSVLTFLAAYARTI NLVGASTFFFVVYAVVITVTRPMTGVIFDRKGENWVLYPCYIMLAIGMVILAKTTLSWQL LISGVFVGLGYGTFMSNGQAVCIKITPTQRVSVALSTYFVALDLGIGVGPYILGSLHGIL AFPQLYIVSAVIAIACFVIYHFGYGHKAARMGVMEKLDVKR >gi|290781600|gb|ADGP01000017.1| GENE 9 9149 - 9673 515 174 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371369|ref|ZP_03854853.1| sigma 54 modulation protein; SSU ribosomal protein S30P [Veillonella parvula DSM 2008] # 1 173 1 173 175 202 58 2e-51 MAMIVRGKNLEITPALKDYVLKNEKKLIKYFDNDMQSQAMLSVEKERQIAEITLRIDGVV LRSVESNTDMYAAIDLAFDKLVRQIHKYKTRLARRLKNSSFHASLVEGKEEGEEKFEVVR TKKFAARPMDVEEAILQMNLVGHDFFVFLNAQTDTVNVVYRRKHGKYGVIEPEF >gi|290781600|gb|ADGP01000017.1| GENE 10 9853 - 10542 660 229 aa, chain + ## HITS:1 COG:CAC1302 KEGG:ns NR:ns ## COG: CAC1302 COG2384 # Protein_GI_number: 15894584 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Clostridium acetobutylicum # 1 154 1 154 229 114 35.0 2e-25 MKLTGRLAAAAALIPEGRSFADIGTDHGYIPVYMCHTGKTPRAVAADIGAGPLQAARTHI VGAGLQEKITCRLGNGLTCLTPGEVEGGVICGMGGRLMTEILRASPHVWRRFSFLVLQPM WYSGTVRRFLYEAGWHIEAETLVTEEHRLYEVMRAVPGRKAMLPFWLWDIGPVNWRQQDA LLARRLTLVIARKKKILNGLLQSRKDQAERIRVLQKELAQLEARKCRLL >gi|290781600|gb|ADGP01000017.1| GENE 11 10527 - 11648 1314 373 aa, chain + ## HITS:1 COG:BH1380_2 KEGG:ns NR:ns ## COG: BH1380_2 COG3323 # Protein_GI_number: 15613943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 129 241 1 113 113 135 54.0 1e-31 MSVTVGDIVAYLKELAPLSLKESWDNPGLLVGNPEEPVQKVMTTLDVMKEGVAYAVAQGV QLIVSHHPIIMKGVKALRTDTYDGQLYQQLLSHHIAVYCAHTNLDSARGGVNDVLAERLQ LQHTAVFIPGWEDALYKIVVYVPHTHAAQLRSVLGKAGAGYIGKYRDCSFSVSGQGRFTP QDGTHPFIGMPGKAETVAEERIETIVPGSRLSAVIETMVAAHPYEEPAYDIYPLKNEGEK LGLGRVGMLPKPLSGTEALHRVKEALGVQTLAFAGNTEVMVRKVAVLGGSGADFISQAKA AGAQLYVTGDVKYHVAQEAIKAGILLADGGHYGTESPVVPVLCRQLEQAAKERGWQLECL IDPTSRDMIQHLR >gi|290781600|gb|ADGP01000017.1| GENE 12 11660 - 12307 888 215 aa, chain + ## HITS:1 COG:BH1431 KEGG:ns NR:ns ## COG: BH1431 COG0352 # Protein_GI_number: 15613994 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Bacillus halodurans # 10 197 1 189 211 147 43.0 1e-35 MTKEQHLQRLRDDPLYVILGEALSCGRTNVQTAADVLAAGVRIIQYREKHKTWREKYAEA KEIRRLCRKYDATFIMNDAVDLAVACEADGIHVGQDDAPVSFVRQWAGPQMLIGVSTHTE EEMTEAVRDGADYVGLGPFYPTQSKRDVHAPVTPKVRQFALQLSIPVVAIGGIGKANIGA LYAEGFRSFAMISAVVGQVQIAAAVQALRQAVAVD >gi|290781600|gb|ADGP01000017.1| GENE 13 12829 - 14052 1695 407 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 403 1 405 421 365 50.0 1e-101 MALIVKKFGGSSVATPEKIRAVVQRVLKEKKTEDKIVIVVSAMGDTTDELVTLAKRLTSK TYGREMDMLLATGEQVSIALMAMAFQAAGQPAISFTGGQAGITTSNAFNKGRILDLQPQR VHQALEAGNIVIVAGFQGMTADGDITTLGRGGSDTTAVAIAGAIHADVCEIFTDVDGIYT SDPRVVPEARKMDTITYGEMLEMAKLGAGVMQPRAVEMGSRFNVPIHVRSTFSEAKGTMI QEEYAMKIKQYLIRGVAQDNNVAKITVLGIPNRPGFAYKIFSELADKNVDVDMIVQSVRI AKEGVTDITFTIARTELSAAQEVLHHIRAEMNVEDILVDDGMAKVSLVGAGMAGHPGIAA GMFGILSDNGINIEIISTSEISISCLIAEESVNKAVQAIHAHFFAEE >gi|290781600|gb|ADGP01000017.1| GENE 14 14062 - 14361 437 99 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1125 NR:ns ## KEGG: Vpar_1125 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 99 1 99 105 79 44.0 5e-14 MTVLDSFIEEMLQPEMPKTAFIEKLIHALTVQRPPRFEIPAPPYTFESNLHGLQYDYVRR EVRLVYKVVPSIYADTVLPFTTFRVILEGLAVCIRMQKW >gi|290781600|gb|ADGP01000017.1| GENE 15 14416 - 14793 413 125 aa, chain + ## HITS:1 COG:CAC0489 KEGG:ns NR:ns ## COG: CAC0489 COG0736 # Protein_GI_number: 15893780 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Clostridium acetobutylicum # 4 121 6 123 124 75 38.0 3e-14 MVCGIDIVEVCRIAAWIETRERALGRFFTAQELAYSARHVKTRAATLAGIFAAKEAFYKA LGTGFRQGKWTDAEVAHTDLGAPYFIFHGLYVSLVSQYAEPPALSISHDGAYAIAQVVWN VPSVK >gi|290781600|gb|ADGP01000017.1| GENE 16 14805 - 16481 570 558 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 [Marinobacter sp. ELB17] # 4 530 1 498 503 224 32 8e-58 MKTLYTAAQMRQMDREAMAAPYGLSPTVLMENAGAAVIAKGAAYVGGWNRKCVTILCGKG NNGGDGLVAARHALAAGAQVYVYIWGDETTYSPESREHLQTLRAMADGKTCVLAETPGAL PDLAMLRRHIESSQVVVDALVGTGFHGALREPTATVVRLVGKCIRTTASPVVLAVDMPSG VDADTGAVSGDDPETGAITATATITFGAYKRGLFQYPGKICAGEVLRDPIGMPFPVLQRT AGTVTYMVEAADVAARLSLRSPNGHKGLHGTVGIVGGSESMSGAALLAACGAVRSGAGKV CLRVPAKVAPACMGKYTEVMAAGVGTGGHFTEADVQTVCEEARNWSVLALGPGLGRHAET QAFVRQVLQRAALPVVLDADGLYHVQAAQDIFQQRAYPVILTPHLGEFSRLTGCSVAAIQ ADSVGTVQAFARSRGVYVLLKGTPTYIVSPTGQTVYVNETGNAGMSCGGMGDVLTGIVAA MWVRETHPAPAEAAFMAAYLHGAAGDRCVRTIGSYGYTPEELAKAVPQAIRELERQAADR YREMVPSPHFEGQGGGER >gi|290781600|gb|ADGP01000017.1| GENE 17 16478 - 17620 948 380 aa, chain + ## HITS:1 COG:BH0239 KEGG:ns NR:ns ## COG: BH0239 COG0860 # Protein_GI_number: 15612802 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 190 375 38 230 238 118 35.0 2e-26 MIKKWCIAAAVFFGVIGVGGIQAATPARVTAVRSVFRTDVQPAFSRTVVTVDQPVIPRLV ITGKGSVVKLTLPQTVLSPLLQTSLQAKDNEPIQKIMLTQQGTRTTVAMYLAQAIGRDDV RFFSLPPIAPQKKGMRLVMDLDNRRQEAAPGETVSWTEQSRRLPPSVPVVAPVGSDFLDA GQWQRLRQGVKGKRICLDPGHGGSDVGAAGRMSQEKNLTLAIARRTAAILTAAGAKAVLT RSRDVDVFAPHDGAVEELQARCTIANAYGAEIMVCIHINSSENTAIRGVETFYNGKTPYD YSLAKYIHTRVLRTGVFPDRGVHSGDFYMLLHTDMPAVLMELGFISNEQDEKILNTEERQ QQLAASIAEGVAEYFIHRKK >gi|290781600|gb|ADGP01000017.1| GENE 18 18190 - 19221 1296 343 aa, chain + ## HITS:1 COG:PM0924 KEGG:ns NR:ns ## COG: PM0924 COG0057 # Protein_GI_number: 15602789 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Pasteurella multocida # 2 338 3 332 334 460 69.0 1e-129 MIKIGINGFGRIGRFVFRAAQERDDMEITGINDVLPVDYMAYMLKYDSVHGPFSGTVEVD TAQHCLVVNGKPVRVTAEKDPAALQWDAVGADYVVEATGRFLTPELASKHLQAGAKYVVL SAPSKPGKDGTQADMFVYGVNTDQYAGQSVVSNASCTTNCLAPLAKVLHENFGIREGLMT TVHATTATQNTVDGPSLKDWRGGRAAGGNIIPSTTGAAKAVGRVIPSLNGKLTGMAMRVP TLDVSVVDLTVNLLQPTSYETICKVMKQASEKEMKGILAYTEEAVVSSDFLGCPVPAVFD ATAGIALTDTFVKVVAWYDNEIGYSQQVLNLISYMHAYHSKHC >gi|290781600|gb|ADGP01000017.1| GENE 19 19330 - 20853 1564 507 aa, chain + ## HITS:1 COG:MA2671 KEGG:ns NR:ns ## COG: MA2671 COG0696 # Protein_GI_number: 20091494 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Methanosarcina acetivorans str.C2A # 2 505 3 512 515 557 53.0 1e-158 MKKKKPVMLIIMDGFGCRKIKKDNAVQQAALPVLRNLWRQYAHTELGAAGEAVGLPPGQI GNSEVGHLNIGAGRIVYQALTRITQDIQTGTFFTKPVLQEAMRQVAEKHTALHILGLVSP GGVHSSEQHLFGILKMARQYGLEKVYIHAFLDGRDVLPRSAGPFLAELEACCRQLGVGEL ATISGRYYAMDRDHRWERVEKAYRAIAEGQGETAPDYKTCLARSYAQDIGDEFVVPTVLQ AHPVADGDAVVFFNFRPDRARQLTAAFVQADFDGFVRNRMPQVYFATMTRYEEDFPVHVI YDKERIPHTLGEVVAAAGKRQLRIAETEKYAHVTYFFNGGQEEPNAGEDRILVPSPKVAT YDLQPAMSAPEITDKVIEQIEKDKYDLLVLNFANADMVGHTGDLQAAIRAVETVDRCIGR IVTAMREAQGQVMIIADHGNAEKMRDEATDSPYTAHTTNPIPCILVSETHAHDRLRNGIL ADVAPTVLQLMQLPIPAEMTGRSLLET >gi|290781600|gb|ADGP01000017.1| GENE 20 20935 - 21396 535 153 aa, chain + ## HITS:1 COG:CAC0115 KEGG:ns NR:ns ## COG: CAC0115 COG1959 # Protein_GI_number: 15893411 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 132 1 132 137 98 42.0 5e-21 MKLNQATDYAFRMVLYLASFPEGTKVTGAALADKQNIPERFLLKIMRSLTAAGIMKSYRG VEGGFSLNRSAKEITLFDIIEAVEGQTELQRCLHDMGSCTRSCSGMCSIYTAFADIQRDL AMKLKSINFYDLAAQEAKAVGVKLPKDAEQKEK >gi|290781600|gb|ADGP01000017.1| GENE 21 21573 - 25130 4334 1185 aa, chain + ## HITS:1 COG:BH2487 KEGG:ns NR:ns ## COG: BH2487 COG1196 # Protein_GI_number: 15615050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Bacillus halodurans # 1 1182 1 1184 1188 488 33.0 1e-137 MQVVKMELRGFKSFADKTVLTFDRGITAIVGPNGSGKSNISDAVRWVLGEQNVRQLRGQK AEDVIFSGTAQRRSQGVAEVSLYFDNQDNTLDIAFSEVVITRRLFRSGESEFYINKRPCR LKDIHRLFADTGMGQDSMAVIEQNRVDRILNSKPDERRIIFEEVAGISRFKGRKQDGLRK LAETERNLERVGDLMSVLAERLVPLAKEAATLQQFRSLDAERRAYEGTLTLQALRNSERL LAKFEYSLQEVVTEVRETRQAVALLEEKRQAALQQMAGAEQQAQQLDEAVLRVHNERDRL VQRRQACIQRQEELASSLQSLEEEQHLWQQKKDRLTALQAAQERQAAQRQKELDAARQRL ALTQALFGKAEEKAQQTAAALAEVLADRQQQEQARLLAERDIQEWQRRLSENEKSGCQLQ QDYEQARRRLQEAGTEKKEAEHRLQVWEHRQQEARIQYDRQEAALEKQRQACQRVRQDRQ RRQEIETTAKQRLRVVQAMIQAHEGAGRAAKTILTATQVPWRAAVCGMAGELCSFPAAYA AAVEAALGGAAKYIVMEEEEAAKSAIAYLRKKQAGRTTFLPLSTVKIRPRTPEELQAAEA AGILGFASDLIQYEAKYTPIFRALLGRTLVAKTVDAASAAAHTFGHRVRIVCLDGTLFNP GGSLTGGSLTGKEASFMGRRVLLRELQAQVQQAETEAVAQQALWERLQRQEKELQAQWET QKQRLQEGEVQRQQACWQAERWREEENRRQQQAETLATRQKAQQQERVSLQAALVQKQER SASLTALSPEEEPALLQTRQEAAAEAERCRRLLTEGQVATATLQEQVRQAQLQVQQWRQQ VQEHEATVAALREKEARLRKKQEETATLYRECTAGVAAKEAEVKQKDAEKEAFYSSRKEL FQRSREWERQSTALRERLQSSEERRHRNEMQVEKYSTECRHYEERLALQGLTRQEAMAER RAGSLKELQQHVESYQQRIAALGTINPAAAEAYEAAQKQQVFYEQQCADLREAQGNLQTV VQDIDTAMAKQFTQAFTAVRQYFQTIFARLFGGGTAELVLTDKKQVLQAGVEIFICPPGK KQQPLTLLSGGERSLTVIALLLAFSAYRPAPFCVFDEVDAALDEANVERMAKYLKNYSGQ TQFIVITHRRKTMEAATVLQGVTMEEKGVSRLVTVKVAEIMEEGT >gi|290781600|gb|ADGP01000017.1| GENE 22 25133 - 26074 542 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 [Rickettsia canadensis str. McKiel] # 1 300 2 300 303 213 39 1e-54 MGFFAKLKKGLEKTKTSLIQNIETVVCGYAKIDDDMYEDLEAVLLTGDVGLETTEYILRQ IRTGVKTKEIQEGKDVVPYVQRCITKLLEENDTPVPTREGTEVIFIVGVNGVGKTTTIGK LANYYRQQGKSVLVAAGDTFRAAASEQLTIWADRIGVPIIKHQEGADAAAVIFDATASAK ARGIDIVLVDTAGRLHTKANLMEELRKMARVAGRNIAGAPHETLLVLDATTGQNAVSQAK LFGETVPLTGVVLTKLDGTAKGGIILSVKRTLGVPVRWVGVGEGIEDLQPFSAVDFAAAL FDAKTGAEETAGK >gi|290781600|gb|ADGP01000017.1| GENE 23 26172 - 26984 852 270 aa, chain + ## HITS:1 COG:PH1157 KEGG:ns NR:ns ## COG: PH1157 COG2145 # Protein_GI_number: 14590984 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pyrococcus horikoshii # 14 270 11 265 265 181 43.0 2e-45 MEIVAAIGAARHAVRTRRPLIHELTGSVTANDCANITLALGASPVMAQALPEVGEVTKKS SALLINLGMLQPTMLASLHRAAGVAVQEGIPLVLDPVGVGTTAWRTQAAIALVKAYKFTI IKGNGSEIQCLAREESGVYGGVDSLRKVLPAREVQHMAVKLGTTVAVTGAIDMVSDGKQT YMLQNGCAMLTRITGTGCMTGALAAAYSAVTTPLTAAVAAITTMSLAGEKVRKQAVQAGP GSLHAALFDVVYRLTAEDLRRDGKIRSVSL >gi|290781600|gb|ADGP01000017.1| GENE 24 27151 - 28590 1700 479 aa, chain + ## HITS:1 COG:L48417 KEGG:ns NR:ns ## COG: L48417 COG4690 # Protein_GI_number: 15672234 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Lactococcus lactis # 6 479 2 459 459 516 52.0 1e-146 MSEYSSCTTILVGKNASLDGSTLVARNEDGHDEPEPQQFVVVDPNEQPRVYHTFKGQVEI PLPEQALRYTATPNANTAHGIFGASGINSAQVAMSATETITTNARVLGADPYVEASIGEA DMVTLVLPYIKTPREGVLRMGKLLEEYGTYEPNGMVFSDKDEIWYMETFGGHHWAAIRIP DDCYVVAPNRLNIDTFDFNSPHVLYSEDLPDFISRHHLNPDRGELNLRHTLGSADYKDVQ YNNPRAWYVQKYFSQIDRPYDEKYPFVDDPACPDLPFLCYPKRKLSVEDIKWALSSHYEG TPYDAYGSGTEAEKKRYRAIGLNRNMEVHILQIRPHVPAAISGIHWLGMASNPYNCMVPF YTTVADTPACYRDTPVTYDPNYLYWLTQTLAVIGDRNYTLFGTLHYEYEKHMNAVLRHMQ QTYDEEFKRNTFSPTEAVEFLTQANEEMAQKVMAATKELLGQFVCTGSHKMTLRFNLAD >gi|290781600|gb|ADGP01000017.1| GENE 25 29372 - 31624 2520 750 aa, chain + ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 7 750 5 743 743 952 61.0 0 MLENKAWEGFDGRLWKEECNVRDFIQKNYHPYDGDEKFLQGPTEATNKLWGKVQEYQKAE REHGGVLKEETEVVSSITAYGPGYIDPKMKDLEKVVGLQTDEPLKRAFMPYGGIKMAEEA LEMYNYKLNPELHKVFTEYHKTHNEAVFDAYTDEMIRARHTHIVTGLPDAYGRGRIVGDY RRVALYGIDQLIAWKEEDKKYNDDGVMTDNVIRLREEIAEQIKALKQMKELANIYGYDIS KPATNAREAVQWLYFGYLAAIKTQNGAAMSVGRISTFLDIYIERDLAAGKITEQEAQELI DHLTLKFRIVKFARIRSYNELFSGDPVWATLEMAGIGMDGRSMVTKTDFRFLHTLENMGP APEPNLTVLYSSQLPHPFKKYAAHISDTTSSIQYENDDVMKPVWGDDYSICCCVSATQTG KEMQFFGARANLAKALLYAINGGVDEKFGMQTGPELAPITSEYLDYDEVVHKYKLMLDWL AGLYVNVLNTIHYMHDKYYYEAAEMALLDTKLRRTFATGIAGFSHVIDSLSAIKYAKVKV IRNDKGLAEDFQVEGEFPKYGNDDDRADDIGVWVLREFLADICKRHTYRDSEATTSILTI TSNVVYGKFTGNLPDGRRAWTPFAPGANPSYGAEQSGLLASLNSVAKMPYEWSLDGISNT QSITPEALGHSDDERAENLVRVMDGYFDQGAHHLNVNVFGKEKLLDAMEHPEKPEYANFT IRVSGYAVKFISLTKEQQLDVIARTFHKAM >gi|290781600|gb|ADGP01000017.1| GENE 26 31685 - 32524 986 279 aa, chain + ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 4 242 10 250 264 302 56.0 4e-82 MTKQITGRIHSTESFGAVDGPGVRFIVFLQGCHMRCRYCHNPETWACSGGTVRTAEDVFK QALRYRSYWKNGGGITVSGGEALLQMEFVTELFRLAKAEGIHTAIDTAGQPFTFKEPFFS AFAELCSLTDLFILDLKEMDNEKHKGLTGFGNKNILALAKYLSDTGIHMWIRHVLVPGLT DDEAGLLAMRKFLRQLKTVDRVEILPYHAMGVPEWERLHIPYTLNDVNPPTDEEIKRAER IVGIRNNLVVPDTKVGTAVSENTKFTTLSASAAAAQPSV >gi|290781600|gb|ADGP01000017.1| GENE 27 32539 - 33288 982 249 aa, chain + ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 4 247 10 252 264 315 58.0 6e-86 MTREIMGKIHSTESFGAVDGPGVRFIIFLQGCHMRCRYCHNPETWKSNEEEEYTLRSAED VLKEALRYRSYWKNGGGITISGGEALLQMDFVLAVFSSAKEKGIHTALDTAGNPFTEEEP FFSTFKRLCAVTDLFILDLKEMDEEKHKQLTGFSNKNILAMARYLSDHGKHMWIRHVLVP GLTDEESGLTALHDFIATLHGVDRVEVLPYHVLGVPEWEKLNLPYTLEHVKPPTPEEVAR AEKLIGTFA >gi|290781600|gb|ADGP01000017.1| GENE 28 33380 - 33640 199 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968354|ref|ZP_06559895.1| ## NR: gi|290968354|ref|ZP_06559895.1| hypothetical protein HMPREF0889_1338 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1338 [Megasphaera genomosp. type_1 str. 28L] # 1 86 1 86 86 144 100.0 3e-33 MKTITRMIRYILISLLTMAIFFIALFVCCVSLENALPLCLNFFHFFTPAPAANLEVTVVI SILTALYTAGSFMHKALYKVGDSWGK >gi|290781600|gb|ADGP01000017.1| GENE 29 33788 - 34441 663 217 aa, chain - ## HITS:1 COG:STM3049 KEGG:ns NR:ns ## COG: STM3049 COG1272 # Protein_GI_number: 16766350 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Salmonella typhimurium LT2 # 4 210 11 216 219 140 44.0 2e-33 MEEHNTTEEILNAVTHGIGVLLSIAGLVAMLHSVSARQAGREALAAALLYGISLIVLYLM STLYHCFFKLPKASHLFKIFDHAAIYLLIAGTDTPVLLILLRRHHGPEGTAVIWLLALIG IIWQCFNVHKYKKLSTVAYIVMGWLLVGALPLIWVYVSPAAVFWLLSGGLIYTVGTFFYL RKTMPYHHLIWHFFVLGGSMAHFYSIYYYLLPASPLP >gi|290781600|gb|ADGP01000017.1| GENE 30 34634 - 36160 1869 508 aa, chain + ## HITS:1 COG:STM2019 KEGG:ns NR:ns ## COG: STM2019 COG1492 # Protein_GI_number: 16765349 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Salmonella typhimurium LT2 # 1 508 1 503 506 466 48.0 1e-131 MAEYIMIQGTGSHVGKSILTTALCRIFFQEGRQVSPFKAQNMALNSYVTADGKEMGRAQA AQAEAAGTEPQVRMNPVLLKPTGQASSQVIINGTPVGTMSARAYHKGYALQAFAAVKAAL REIEREADTVVIEGAGSPAEINLKDHDIVNMRVARHLQAPVLLVADIDRGGALAALVGTL DLLEPEERALVRGLIINKFRGDVSLLTPALDFLRQKTGKPVLGVIPFIENMRIDEEDSVS LQDKPTQAQAEKAVSIAVIRLPKLSNFTDFSALAAEPDVSLFYTTEAASLLTVDAVIIPG SKNTVADLQWLRRHGLDRALQRAVAAGIPLIGICGGYQMLGRRIFDPLHTEAALTECAGL GFLPLCTTFCGHKKTVQVTAACRDFPFAGAMLQGADLTGYEIHQGRSEVSSGVPVMTAVG GSSKRESACVGCARPDGLVWGTYVHGIFDHDSFRRAVVNGLRVRKGLSPLGTTYSYVAAK EREYNRLADTVRAHLDMEAVRRIMRGEQ >gi|290781600|gb|ADGP01000017.1| GENE 31 36163 - 37116 585 317 aa, chain + ## HITS:1 COG:FN0975 KEGG:ns NR:ns ## COG: FN0975 COG1270 # Protein_GI_number: 19704310 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Fusobacterium nucleatum # 5 311 11 321 325 89 25.0 1e-17 MVVLLAGILEFFAADLRCVSYPASIMRRVVDWTEKKLYAEQAPASRQVWAGTVAAVSVLA AVYNVVTWPKVLLYYETPVYIRYVAEAAVLAFTIGPCRSARAAMAVQQAVQCGQRQRARY YAERLAGGDTALPAEADPVRVTMTRVAKNTVDSIVSPLFFFVLLGLPGAVVYRVVHMLAS RWGDKRQPYYRYFGRTAVRLEAILNYIPVRLTCIFLILAAFFASYDWRGACYTARRTAFL SFAASDGGAEATIAGALHRRSGEYSSDGETCGFRPVAAASVSSWRPAHITGAVHLMYGVY LIALVLTAVVVGASGWL >gi|290781600|gb|ADGP01000017.1| GENE 32 37216 - 38283 1054 355 aa, chain + ## HITS:1 COG:lin1133 KEGG:ns NR:ns ## COG: lin1133 COG0079 # Protein_GI_number: 16800202 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Listeria innocua # 6 354 8 357 361 198 33.0 2e-50 MKQFAHGGNIYTCSQDGKKWLDFSANINPLGVAPGVRQVLEHRLDDIAVYPEPCGERVKQ ALTAHYEIPGAAILVGNGSTELLYTYFHTYPCRKTVLPVPSFSEYERAVRAVGGTPVYVY SRRRRSFAFPLAEVCKACERAECVIIGNPANPTGTLIEREQLLYVIQQAQKWHTDVLIDE SFLDFLPTAEQYTVLDLPQRFEHVIVFRSLTHFYALPGLRLGFAVVSKRRAAAMQQHMYC WNVNILAQHAGIAALQETAYAEETRRVVAQEKQWLRRQLQALPGLETVKPTVNFILLHTS GTGKTAAELAAGLRERGILIRDGSNFAGLDPFTCRVAVKLRSENERLVQALESVI >gi|290781600|gb|ADGP01000017.1| GENE 33 38495 - 39826 1591 443 aa, chain + ## HITS:1 COG:BS_brnQ KEGG:ns NR:ns ## COG: BS_brnQ COG1114 # Protein_GI_number: 16079722 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 10 432 11 431 440 304 43.0 2e-82 MGEKKNVRTISIGLMLFALFFGAGNLIFPAAMGQHAGINVWWAVLGFIVTGVGLPLLGVL AMGYSGCKNLQELAGRVHPKFGLFFTVLSFITIGPAFATPRTGSVSYEIAVRPFLANGGS HATMIGFLVLFFLVSFWLSASPQKLVDRIGKILTPALLVVIIVLIVKSFISPLGVPTLPT PEYGTPTVAALQGFLDGYNTMDAIASLVFAILVIEFIMEDGVTVPREITKYVFKAGFVAV ACLAVVYVFVAKIGADSVAAFGLQSTGAPVLSLSAMILFGNVGALILAVIVLLACLSTSI GLITSCAAYFHELNGSIGYRAWVTIFSVVSFLVALFGLKTIITAAIPVLMFIYPIVVVLV ILTFLHKLFDGRQCVYAWTIGLTLITALINGTQTAKISLGPVDTFFNTMVPFHSIGMGWI CFAVIGFIIGLVWKGAVAAKKSA >gi|290781600|gb|ADGP01000017.1| GENE 34 39895 - 41298 1740 467 aa, chain + ## HITS:1 COG:RSc1588 KEGG:ns NR:ns ## COG: RSc1588 COG0531 # Protein_GI_number: 17546307 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Ralstonia solanacearum # 1 457 1 462 476 383 46.0 1e-106 MNLFRRKSYEDLMTEAQDKSLLKVLGATDITLLGLGIIIGTGIFVLTGIGAAEYAGPGLM LSFVLAAVTCAFICLAYAELASFLPVAGSTYTYAYASLGEFFGWWVGWSLILEYSVGASA VAGGWSAYFCGILHAAGIDLPKVLTAVPAEGGWINLPAVLIVLFATFLLVVGVQASAKVN RLLVFIKIGTIFIFLFLAGPHIQPSHWTPFLPYGIKGVAAGTAVLFFAYLGVDALATTAE EAKNPKRDMPIGIIAALALCTILYIAVCAVMTGVVPYKQLDTAAPASFVLEYIGMRFGSA LVGTGALCGLSTVILGMLFAQSRALYSMSRDGLIPMRLYHVHPRFRSPYIIQLIVGVLVA CITGFTPIHIVAETCSAGTIFAFLCACVGILLLRKQYPDKPRGFRCPAVKIIAPLGFIFC AFIFSQLSVHTMVLFVVWSLIGFILYAVYGYRHSLLQKQLPGDDPSK >gi|290781600|gb|ADGP01000017.1| GENE 35 41517 - 41907 321 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968362|ref|ZP_06559903.1| ## NR: gi|290968362|ref|ZP_06559903.1| Hep/Hag repeat protein [Megasphaera genomosp. type_1 str. 28L] Hep/Hag repeat protein [Megasphaera genomosp. type_1 str. 28L] # 1 130 1 130 130 227 100.0 2e-58 MKPLFIHYDGHRTHAYGGMREIKKKNRKWLSLMIALSITLGGMFFYSEVAADGGQQIHGI SVNVDAGGEPGDNYNNDGAGHLGVAIGNKASSRAEYGTAVGPFAKADRQQSIALGYKAQA LGEYSAAYGA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:38:34 2011 Seq name: gi|290781550|gb|ADGP01000018.1| Megasphaera genomosp. type_1 str. 28L contig00012, whole genome shotgun sequence Length of sequence - 46519 bp Number of predicted genes - 49, with homology - 48 Number of transcription units - 17, operones - 9 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 63 - 869 670 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 949 - 979 -0.4 + Prom 880 - 939 3.8 2 2 Tu 1 . + CDS 993 - 1298 431 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 1310 - 1356 15.2 - Term 1296 - 1342 15.2 3 3 Tu 1 . - CDS 1348 - 1746 422 ## Acfer_0973 thioesterase superfamily protein - Prom 1833 - 1892 2.0 - Term 1793 - 1838 9.6 4 4 Op 1 . - CDS 1895 - 2308 867 ## COG0716 Flavodoxins 5 4 Op 2 . - CDS 2323 - 2880 632 ## ELI_2754 hypothetical protein - Prom 3098 - 3157 8.4 + Prom 3095 - 3154 7.5 6 5 Op 1 . + CDS 3190 - 3855 860 ## COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease 7 5 Op 2 3/0.000 + CDS 3886 - 4275 335 ## COG5341 Uncharacterized protein conserved in bacteria 8 5 Op 3 . + CDS 4286 - 4810 515 ## COG4769 Predicted membrane protein + Term 4835 - 4868 4.5 - Term 4825 - 4853 0.3 9 6 Op 1 . - CDS 4876 - 5442 863 ## COG0279 Phosphoheptose isomerase 10 6 Op 2 . - CDS 5458 - 6018 783 ## COG0288 Carbonic anhydrase 11 6 Op 3 . - CDS 6029 - 7378 1322 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 7434 - 7493 6.2 - TRNA 7645 - 7721 78.5 # Arg CCT 0 0 - Term 7989 - 8046 19.1 12 7 Tu 1 . - CDS 8100 - 9134 1177 ## COG0280 Phosphotransacetylase - Prom 9238 - 9297 7.3 - Term 9293 - 9332 6.1 13 8 Op 1 22/0.000 - CDS 9347 - 9886 678 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 14 8 Op 2 23/0.000 - CDS 9888 - 10634 919 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 15 8 Op 3 8/0.000 - CDS 10636 - 11703 1254 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 16 8 Op 4 . - CDS 11718 - 11927 278 ## COG1146 Ferredoxin 17 8 Op 5 . - CDS 11957 - 12634 747 ## Thit_1915 hypothetical protein - Prom 12713 - 12772 8.7 - Term 13014 - 13064 15.0 18 9 Tu 1 . - CDS 13071 - 13616 808 ## COG0386 Glutathione peroxidase - Prom 13695 - 13754 12.1 - Term 13986 - 14027 10.0 19 10 Op 1 1/0.250 - CDS 14075 - 15358 1536 ## COG2733 Predicted membrane protein 20 10 Op 2 . - CDS 15360 - 16631 1419 ## COG2733 Predicted membrane protein 21 10 Op 3 . - CDS 16631 - 17368 632 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 17564 - 17623 9.4 + Prom 17385 - 17444 6.7 22 11 Tu 1 . + CDS 17579 - 18532 837 ## COG1600 Uncharacterized Fe-S protein 23 12 Op 1 . - CDS 18449 - 19009 443 ## 24 12 Op 2 . - CDS 19003 - 19950 1222 ## COG0616 Periplasmic serine proteases (ClpP class) 25 12 Op 3 1/0.250 - CDS 20005 - 21330 1680 ## COG0305 Replicative DNA helicase 26 12 Op 4 1/0.250 - CDS 21341 - 23248 2266 ## COG1067 Predicted ATP-dependent protease 27 12 Op 5 9/0.000 - CDS 23265 - 23711 448 ## PROTEIN SUPPORTED gi|121534992|ref|ZP_01666810.1| ribosomal protein L9 28 12 Op 6 4/0.000 - CDS 23708 - 25729 665 ## PROTEIN SUPPORTED gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 29 12 Op 7 . - CDS 25748 - 26692 787 ## COG4241 Predicted membrane protein - Term 26738 - 26777 7.3 30 12 Op 8 . - CDS 26791 - 28452 2180 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily - Prom 28609 - 28668 6.5 31 13 Op 1 . - CDS 28678 - 29604 897 ## gi|290968394|ref|ZP_06559934.1| hypothetical protein HMPREF0889_0171 32 13 Op 2 . - CDS 29635 - 30435 892 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 33 13 Op 3 . - CDS 30449 - 30949 413 ## gi|290968396|ref|ZP_06559936.1| putative phosphohistidine phosphatase SixA 34 13 Op 4 4/0.000 - CDS 30967 - 31344 425 ## COG0640 Predicted transcriptional regulators - Prom 31366 - 31425 5.6 35 13 Op 5 5/0.000 - CDS 31451 - 31951 459 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 36 13 Op 6 42/0.000 - CDS 31957 - 32769 1183 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 37 13 Op 7 . - CDS 32762 - 33436 199 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 33599 - 33658 8.6 + Prom 33444 - 33503 6.7 38 14 Tu 1 . + CDS 33627 - 34547 1090 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 34586 - 34628 9.1 - Term 34568 - 34621 15.8 39 15 Tu 1 . - CDS 34653 - 35279 527 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis - Prom 35318 - 35377 7.5 - Term 35555 - 35605 12.0 40 16 Op 1 12/0.000 - CDS 35651 - 35935 315 ## COG2440 Ferredoxin-like protein 41 16 Op 2 1/0.250 - CDS 35937 - 37232 1660 ## COG0644 Dehydrogenases (flavoproteins) 42 16 Op 3 1/0.250 - CDS 37279 - 37992 244 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 43 16 Op 4 2/0.250 - CDS 37985 - 38899 1028 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 44 16 Op 5 1/0.250 - CDS 38917 - 39930 1217 ## COG0142 Geranylgeranyl pyrophosphate synthase 45 16 Op 6 13/0.000 - CDS 39961 - 42123 2148 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 46 16 Op 7 . - CDS 42139 - 42684 687 ## COG1556 Uncharacterized conserved protein - Prom 42784 - 42843 4.4 - Term 43142 - 43183 7.4 47 17 Op 1 4/0.000 - CDS 43206 - 43577 562 ## COG3862 Uncharacterized protein with conserved CXXC pairs 48 17 Op 2 6/0.000 - CDS 43579 - 44847 1366 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 49 17 Op 3 . - CDS 44847 - 46313 1672 ## COG0579 Predicted dehydrogenase - Prom 46357 - 46416 8.2 Predicted protein(s) >gi|290781550|gb|ADGP01000018.1| GENE 1 63 - 869 670 268 aa, chain + ## HITS:1 COG:BMEI1954 KEGG:ns NR:ns ## COG: BMEI1954 COG1464 # Protein_GI_number: 17988237 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Brucella melitensis # 13 268 13 268 268 251 47.0 8e-67 MYQWIKKLGIGILLTTCVLAAGCGSQKSAPNEVRIGVTAGPQAEVMDAVAKEAAKQGIHI KVVEFNDYVQPNKALAENDLDMNSMQHQPYLDNIIKKEGLPLVSIGKTMLLPMAVYSHKY KTLSQIADGTKVAIPNDPTNGARALLLLQKAGLITLKNGTSVTASVPDVVNNPKHLQFVE LDAAQIPRSLDDAGLACVNTNYAIPAGLNPQKDSLLVESKDSPYANVFAVHTGNENNETY KKIVAVYHSDVIRQFIKNRFQGAVVPAF >gi|290781550|gb|ADGP01000018.1| GENE 2 993 - 1298 431 101 aa, chain + ## HITS:1 COG:FN0093 KEGG:ns NR:ns ## COG: FN0093 COG0526 # Protein_GI_number: 19703445 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 1 101 1 101 103 91 40.0 4e-19 MSIITGTAENFNQVVLQAKGSIIVDFWAAWCGHCTNMLPIVEAVIADHPDVTLVKVNVDE QPSLAMKYNVNVIPTLLFVKDGEIKHTAVGDQTKEYLESLL >gi|290781550|gb|ADGP01000018.1| GENE 3 1348 - 1746 422 132 aa, chain - ## HITS:1 COG:no KEGG:Acfer_0973 NR:ns ## KEGG: Acfer_0973 # Name: not_defined # Def: thioesterase superfamily protein # Organism: A.fermentans # Pathway: not_defined # 10 129 9 128 133 129 53.0 4e-29 MDRQENVQHCFGCGKENPIGLHLSIRIEATGAVTSFTPTQAHAGYGDRMHGGLVTTLLDE VMGDYVYRTVGKPAYTARLEVRFHSSVPIGETVRITVVQEKIHGRLVVMSGRVCRADGTL AAEGKATLMIRA >gi|290781550|gb|ADGP01000018.1| GENE 4 1895 - 2308 867 137 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 2 133 4 138 142 110 50.0 8e-25 MVEIVYWSGTGNTEAMAQEIEAAVKAAGADVETVLFDDTDADTVASKDVILLGCPAMGAE ELEETVVEPFMEDLLPKLSGKKVGLFGSYGWGTGEWMDTWEQRVKDAGATVIGTAIVNET PNNSEECAMLGKAAAQA >gi|290781550|gb|ADGP01000018.1| GENE 5 2323 - 2880 632 185 aa, chain - ## HITS:1 COG:no KEGG:ELI_2754 NR:ns ## KEGG: ELI_2754 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 2 185 4 186 187 129 36.0 8e-29 MELDSFLIQHCSATLAGLKMGTLLCLPHCLTYTDYPRIIERYNLRFNGKQLHFKILFCCP QRTLLYIYRPTMVERYLHTEEVRNFLQAYGYSTEQTLLAMLEHLGARFAAGNCFPHELGL FLGYPLTDVCGFIRHKGNHAKMCGEWKVYGDAEEALRLFRRFDCCRRTYSKQLAVGASLE SLIVA >gi|290781550|gb|ADGP01000018.1| GENE 6 3190 - 3855 860 221 aa, chain + ## HITS:1 COG:PA1575 KEGG:ns NR:ns ## COG: PA1575 COG5018 # Protein_GI_number: 15596772 # Func_class: R General function prediction only # Function: Inhibitor of the KinA pathway to sporulation, predicted exonuclease # Organism: Pseudomonas aeruginosa # 27 184 24 177 183 67 31.0 1e-11 MKAVFVDFEMNPIDRRHQEARRICQGEIIEIGAVKLDEDGKEIGAYKEYICPEYTSQMNA TCQALTGITMDMLTPAAHFQTVFAHFLAWCNEDAPNAYEMYAWSENDWHQLTCEMRLKQS DMNDPQIRWMLDHWQNFQQIFCNLLGLDNVISLDKAVTLLGTSFVGKMHDALWDARNTSQ LYVLSKKDAHFRTRIGPIIAATKPAEPLTYSLADAFLAAQK >gi|290781550|gb|ADGP01000018.1| GENE 7 3886 - 4275 335 129 aa, chain + ## HITS:1 COG:lin2788 KEGG:ns NR:ns ## COG: lin2788 COG5341 # Protein_GI_number: 16801849 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 124 7 136 144 90 41.0 5e-19 MIKKWDIALIALLLCLSFIPEGLFALSDHLTEKPQIEAVVYVDGTVYKTVPLSGHKGTLL FTVRTARGYNTIVVKNDTIGIIDADCPDKICIKQGFISQPGATAVCLPHRLLIEIKSARQ TQPDIIPAN >gi|290781550|gb|ADGP01000018.1| GENE 8 4286 - 4810 515 174 aa, chain + ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 171 1 173 180 122 45.0 3e-28 MNNTFRLVLIGIFVAQSLVLYIIEGLLPVPFIAPGAKLGLANLITVIALYTLPKKKDVAL ILFLRILLSTAFAGGINAFFYSVCGAIFSFGGMALLQKTHRFSLFGVSAAGGIFHNIGQL LVAACIVENLHLFLYTPVLTLTGTGTGILIGIIAAFTLQHLKKLPLFKRLKTFS >gi|290781550|gb|ADGP01000018.1| GENE 9 4876 - 5442 863 188 aa, chain - ## HITS:1 COG:Cj1149c KEGG:ns NR:ns ## COG: Cj1149c COG0279 # Protein_GI_number: 15792473 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Campylobacter jejuni # 1 182 4 185 186 186 52.0 3e-47 MIAERMAEHEAVLQGTKALEPLLAAAGSMVSEALLTGHKILFCGNGGSAADAQHMAAEIM GRFQAEREPYPALALTVDTSVLTAIGNDYGYEAVFARQVRGLGREGDVLVGISTSGTSRN VLAALAVAKKMGLKCLGFSGAKSEQMASFCDICLAVPSTVTARVQEMHIMMGHILCEIAE TAIVRQKK >gi|290781550|gb|ADGP01000018.1| GENE 10 5458 - 6018 783 186 aa, chain - ## HITS:1 COG:BS_ytiB KEGG:ns NR:ns ## COG: BS_ytiB COG0288 # Protein_GI_number: 16080121 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus subtilis # 27 181 24 181 187 111 35.0 6e-25 MSKLADFFKAQNREFLKVARGQGGLPQIDKKPVRKLAVLTCMDTRLLYIVEPALGLNRGE AVVIKVAGARITEAFDSALGSLLVAVYELGVTDVAVVVHDDCGMVHTTADGLCEKMATAG VSVPDIQAIRPHLEAWADPVGEPVPAVRDMVQRLRKNPYIPDSVQVYGISINPANGKIHV VEDSME >gi|290781550|gb|ADGP01000018.1| GENE 11 6029 - 7378 1322 449 aa, chain - ## HITS:1 COG:PH0876 KEGG:ns NR:ns ## COG: PH0876 COG0493 # Protein_GI_number: 14590734 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pyrococcus horikoshii # 21 443 30 465 472 284 39.0 2e-76 MTEENKHLESFAKEPLRDRDFTAAEVRVEAQRCLQCKVPLCRRGCPIGNDIPKFIHALAA GDPVQAATYVYQHSDLPAICGRVCPREKQCEGSCVWNHRGRPIAIGKLERFIADQAFSGR YIPRHVSTGQAGKVAVIGSGPAGLSVARNLAMRDYAVTVWEAKDCPGGMLMYGIPTFRLH KDVVLREVKLLEEMGVQFRYGVKIGQQQSPEFFWKEGFAAVFVGIGTAEEWNLGVKNEHC TGVIGATAFLEDVQKVQYGKAEVSSLPVRNGDRVVVIGAGNVAIDAARTAVRLGAVVTIV YRRAEKNMKCLPSEYEEAKEDGVQFQFYSAPCAVVGTDHVQGLQYEKQKILEDATMVPTG EFGIIEADKIIAAIGNKPEEAVITQLQVKTQGDGYITVQKKPYGMTNYAGVFAAGDIVHK PATVVLAMREGRKVAAGIDAYVRSLQKER >gi|290781550|gb|ADGP01000018.1| GENE 12 8100 - 9134 1177 344 aa, chain - ## HITS:1 COG:FN1172 KEGG:ns NR:ns ## COG: FN1172 COG0280 # Protein_GI_number: 19704507 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Fusobacterium nucleatum # 1 331 4 333 337 315 48.0 9e-86 MRFTEDLKSRVAKAQKKIVLPETNSRRVLKAAERVLADGFAKIVLIGKLDKIKKDASKFQ IDLTGVEVIDPETYYRMDELCQYFAERRKKKGMTVEQAREIMINNYTFFGAGLVALGDAD GVVSGAATTSADVIRAGLQVIGPRPGNKTVSSAFILLTNTPQYGDNGILVLGDCGVIPNP TPEQLADIACICVQRARRTVQMLNPKVALLSYSTKGSGSGTTVENVRKAVEILKQRNVDF DFDGELQADAALVPEVGEHKAPGSKVAGHANVLIFPTLDAANIGYKMVQRFANATALGPL VQGLAKPILDLSRGCSSEDVADVVAVCCSDAITNDIYRQEANQQ >gi|290781550|gb|ADGP01000018.1| GENE 13 9347 - 9886 678 179 aa, chain - ## HITS:1 COG:MA2909_2 KEGG:ns NR:ns ## COG: MA2909_2 COG1014 # Protein_GI_number: 20091730 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Methanosarcina acetivorans str.C2A # 7 175 12 179 186 128 42.0 5e-30 MKHEVILSGFGGQGVMSIGKNLVEAGVEENLQVSWVPSYGPEMRGGTANCTVILSTERIG SPLVEHPSEIVVMNRAALAKFGSLVQTGGIIFINSSIVPDKVEREDVTVYYVPCDEIARE LGNPKVSNMVMLGAYVGATAVLSVSTIETMIHNMFTGTKAKLIALNMQALQRGLACVKH >gi|290781550|gb|ADGP01000018.1| GENE 14 9888 - 10634 919 248 aa, chain - ## HITS:1 COG:MA2909_1 KEGG:ns NR:ns ## COG: MA2909_1 COG1013 # Protein_GI_number: 20091730 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Methanosarcina acetivorans str.C2A # 6 244 24 262 296 247 48.0 2e-65 MRKTIYEKSTGLQDTELHYCPGCSHGIVHKLVAETLAEMNAVETAIGVCPVGCSVFAGNY FACDMIEAAHGRAPAVATAVKRTHPEVPVFTYQGDGDLASIGAAEIVHAAMRGEKFTTIF INNAIYGMTGGQMAPTTLIGQRATTAPSGRTAEQAGNPMRVSEMLATLDGLVYAERVCVT DISHLMKAKRAIKKAFTRQMNNDGFTFVEVLCSCPTNWGMDIKEANEWLISHMIPYYPLG VIKDVEVP >gi|290781550|gb|ADGP01000018.1| GENE 15 10636 - 11703 1254 355 aa, chain - ## HITS:1 COG:TM1759 KEGG:ns NR:ns ## COG: TM1759 COG0674 # Protein_GI_number: 15644505 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Thermotoga maritima # 1 343 4 345 356 397 60.0 1e-110 MKREIWKGSEAIAEAAIRAGCKGFFGYPITPQNEIPEYMSFRMAESGGVFVQAESEVAAI NMVYGAAATGVRCMTSSSSPGISLKQEGISYIAGAKLPAVIVNVMRGGPGLGSIQPSQAD YFQATRGGGNGDYRTPVLAPSNLQEAVDLVQEAFDIADQYRTPVVVLADGLIGQMMEPIV WKERTPRTLPPKDWAACGRGKREHNNFLSSLLIAAADCEEHNIELLKTYEEIEKNEVRWE EIMVADAEIVIVAYGTPARIAITAVENLRERGIKAGVIRPITLWPFPYDRIREIAGQAGV AQMLVVEMSTGQMIDDVKIAVAGQKPVHFYGRYGGVIPTVSEVAEAAAKIWREGK >gi|290781550|gb|ADGP01000018.1| GENE 16 11718 - 11927 278 69 aa, chain - ## HITS:1 COG:TM1758 KEGG:ns NR:ns ## COG: TM1758 COG1146 # Protein_GI_number: 15644504 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Thermotoga maritima # 1 69 1 68 77 57 49.0 7e-09 MTMYVTFRKERCKGCGLCISVCPKEILALEEETNIKGYRPAVCTDMKACIGCAGCAKICP DSIITIEKE >gi|290781550|gb|ADGP01000018.1| GENE 17 11957 - 12634 747 225 aa, chain - ## HITS:1 COG:no KEGG:Thit_1915 NR:ns ## KEGG: Thit_1915 # Name: not_defined # Def: hypothetical protein # Organism: T.italicus # Pathway: not_defined # 5 225 1 222 224 187 42.0 4e-46 MTDWIDASRVHIVVGHFGSGKTEVALNLAFTLAARGYAFALADLDIVDPYFRSRECKALV EAKGGRLIMSSSQHMDADLPAMPPDVVTLFQQSCRYGVMDIGGNPSGARVLARYRHELQQ CEARLWCVVNGNRPLSDTPEKAVYYLREIEKAARMPVQGLINNTHCCQYTAVSDVRQGAI LAEEVSARTGIPVICHAVPRRLATAVAAFVNPVFPMDLYMKKPWE >gi|290781550|gb|ADGP01000018.1| GENE 18 13071 - 13616 808 181 aa, chain - ## HITS:1 COG:CAC1549 KEGG:ns NR:ns ## COG: CAC1549 COG0386 # Protein_GI_number: 15894827 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Clostridium acetobutylicum # 1 173 1 173 181 237 62.0 9e-63 MSIYDYSVKDITGNDVALREYRGKLVLIVNTASKCGFTPQYDGLEALYKKYKDRGLVILG FPCNQFLQQEPGDAKEIQSFCKLNHGVTFPLFAKVDVRGEKAIPLYQYLTATAPFQGYEL QKPGGKIIEDVVRKNYPDNLEGNGVKWNFTKFLISRDGQQVTRFEPTTTPEELDSIIAAA L >gi|290781550|gb|ADGP01000018.1| GENE 19 14075 - 15358 1536 427 aa, chain - ## HITS:1 COG:CAC1096 KEGG:ns NR:ns ## COG: CAC1096 COG2733 # Protein_GI_number: 15894381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 426 1 425 425 150 25.0 5e-36 MTYRQRADAILGLSAVCFLAILAWWYTHPAGVREALLFFVIQSALIGSIADWFAVTALFE KPLGFPYHTELLYRNRTQIIDGITRMISEKLLQPEKWKEKLYDVSFMDLLIQWVHSPRGR ERFRRILLEVGVRAYRFASQEKTQANIAAQIRRYLKQQPLVAFFQDRLISLLEDPDSHML QDAVRLGRRLVDSDDFDALLARMLQQWMEESKHTPASVITINKFLGMVDTRKIAKDIKGG ILSWLEQWEQAEGEDRVWLCRKFELFLYSMNGQLAYAVQNWQDQFVDSLPIERWLQATQK SGREYFTVGEQGREELKDMLEEQFLHYLSYCSEHPEIKEWLNEQIRRACLVILENEHSLI AVAVRDVLSGFDKKRFNAFLESKVGEDLAWIRINGAIVGGSIGFFVFLFLQFCYGPFIGP AIRHLFL >gi|290781550|gb|ADGP01000018.1| GENE 20 15360 - 16631 1419 423 aa, chain - ## HITS:1 COG:yjiN KEGG:ns NR:ns ## COG: yjiN COG2733 # Protein_GI_number: 16132157 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 36 415 35 414 426 97 25.0 6e-20 MAETKTIVQKRTHIANYILVIAAIVLLLAYPVRDLFWGGLLTHVAGAALIGGLADWYAVT ALFRKPLGISFKTALIPNSKERIAEMARQMVEHEILTVPNMYNVLKHHPVLGTTLDYLRT EKGFQSAERIAGQILNTFLYTVDMKTIVRIFANVGGQAIERIELAPIMSKAIRIGLRGES GKDFLDFMILHLEILIQSDTMKKYMGEIYEASIQQYANRHPFMKLFIKPLLKSEIFSSRT VAEKLSQKFLTVLAEAKQPNSLKREQALRYLWAQTDKIEFNAAWKEGMEGYKNRMYKNLV TRPDTKEAWQRYVQDPDRQKRVCTAAAKYVVGKLEAWRESPDQVEQVNRAALAFVARELK RLQVWFGKTAQQEILQYDSRYLAEQLESRVWYDLQMIRINGSLVGAVLGAIIFFIMYSLK GGV >gi|290781550|gb|ADGP01000018.1| GENE 21 16631 - 17368 632 245 aa, chain - ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 6 199 2 203 237 115 30.0 1e-25 MAAIQLFFLHHSGFAVETPSKILVFDYWRDPAGVVSQLEKTRKPLWFFVSHRHEDHFNPQ IAAFQQKTAHYIVNEEVPLAISASEKMQRLRVYDTIVIDDVTITQYGSTDEGGSFYVRTD GIQLFHAGDLNRWHWNGDTGQNNDRAKENFIREMQHLSGLTTDFAFFPVDARLESAREWG VSGFLQVVKVRKALIPMHYFGSVWQPSATFVRQYGHIPLWIPKQAGDTRRWLYGEAENKW GKGEK >gi|290781550|gb|ADGP01000018.1| GENE 22 17579 - 18532 837 317 aa, chain + ## HITS:1 COG:BH1020 KEGG:ns NR:ns ## COG: BH1020 COG1600 # Protein_GI_number: 15613583 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Bacillus halodurans # 44 282 56 303 391 152 35.0 1e-36 MNSLHIKQFIYQLGIPCVGIAPGQFPAPPPPARPCPLAAGQGAERYEPERLLSPCRSIIV MLFPYYVADPPTANLSLYCRSTDYHLLIRRYLQTVEAYLHQHYPSCRTLSVADTSPLADR YLAYLAGLGFIGDNDCFIHERYGSYCFIGSILTTLPLTPDTPLHRECYHCGACRHACPGH CFDGADYDYRLCKSYLTQKKGSLSLPEIEVLRKTPLIFGCDMCQAVCPHNAEIPETPLND FKENRIYTLSHEAIASLSNREFQRKYGNRAFAWRGKKILLRNMEYLRLPPSMPEQAHGYT QQQHADENRRTYNKRNE >gi|290781550|gb|ADGP01000018.1| GENE 23 18449 - 19009 443 186 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVKSYILQVLDHISNLCLHPQTTMTHIVQETRLKEGLGIAVLYIVLVQAADMATENTYAS NNWLGIAVLLLAVVALTHGASRLLGGHGRFSSLLAGGCFALLPQYIRLAAVALTPCIGEA TVRIVGSIAYIISCILWILAIQAVYHFSTGRSLGAAAFLLFIPFVIGAAVFVGVLLLCIS VGLLWH >gi|290781550|gb|ADGP01000018.1| GENE 24 19003 - 19950 1222 315 aa, chain - ## HITS:1 COG:BS_yteI KEGG:ns NR:ns ## COG: BS_yteI COG0616 # Protein_GI_number: 16080005 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Bacillus subtilis # 36 275 53 292 335 179 42.0 7e-45 MGEKKKRYITGVTLLVICVITIMAAWLHVREPYDGSGKRGKKIALITVSGPITGGDGQGF WNTGGATAPSLMKQIRQATADAEVGAILLRIDSPGGSAAATQEIARELQRAKDNHIPVVV SMGDTAASGGYWLAVYGDTLFADPSTITGSIGVYMSYYDARGLSRKLGIREEKIKSGAHK DIFSPFRPMTAEEKQMTQDMVNEMYNQFVTVVAKERHMRPETVRALADGRVYTGSRAKAL GLVDRLGNYYDALAYTKKLVHTDADDEDCLVTYEDGQPWQDWVKGNLNLSQAVKNVAEDS SLSLPTVLMKAVTAW >gi|290781550|gb|ADGP01000018.1| GENE 25 20005 - 21330 1680 441 aa, chain - ## HITS:1 COG:lin0047 KEGG:ns NR:ns ## COG: lin0047 COG0305 # Protein_GI_number: 16799126 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Listeria innocua # 2 441 6 446 450 474 56.0 1e-133 MEQRIPPQNIEAEQAVLGAMMLEHNAVVTALELLQAEDFYRDVHKVIFEAMARLHRTNQE VDVITLPEELRRMKKLDDVGGLEYILTLPNVVSTAANLEYHVNIVVEKALARNLITTCTE LATSAYEGTQASEELVDRAEQKILKLAENKVRGDFTPVGQVVTETLHKIEELYANKAGLT GLPTGFRELDRMTSGLQNSDLILIAARPSMGKTAFTLNIAQNVGVRQHKTVAFFSLEMSQ EQLVQRLLCQLAHIDSQKLRTGHVAGDEEWGRLTEACEKLYNAPIYIDDTPGISIAEMRS KARRLKAEHGLDVIIVDYLQLMQGRNSESRQQEISEISRSLKGLARELKVPLIALSQLSR SVENRQDKRPMLSDLRESGALEQDADIVSFLYREDYYDKETENQHITEVILAKHRNGPVG SIKLFFKNEYTLFLNLDTHHE >gi|290781550|gb|ADGP01000018.1| GENE 26 21341 - 23248 2266 635 aa, chain - ## HITS:1 COG:CAC3716 KEGG:ns NR:ns ## COG: CAC3716 COG1067 # Protein_GI_number: 15896947 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Clostridium acetobutylicum # 26 635 23 634 634 613 50.0 1e-175 MKELLDKLLQRHKYLEPTAEEELRRQVNVLYGAFTGLIGSEKMVLRASKYSALTYIHSED PRQRLVGLQRLVYESTAYDRIPNDDEVVDVLNELESVLAEMLARQAVEERLEKKITRRMD EKQQEYVQEIKMQIISEELQDVETPQTKKKLADLQKLDTIQLTESVMERVRPKTLQAVVG QERAVEAMQSKLASVYPQHLLLYGPPGVGKTTAARIILQEAKQLPFTPFAAEAPFIETDG TTLRWDSRDMTNPLLGSVHDPIYQGARKDLADTGIPEPKPGLVTEAHGGILFIDEIGEMD PMLLNKLLKVLEDKKVTFDSAYYDEEDPNVPAYIHKLFRDGAPADFILIGATTRDPSEIN PAIRSRCAEVFFEPLVPQDIEKIVENAAKQLQVSLADGVAAKIASYTIEGRKAVNILADT YGLAVYQSGHQDSLTLTCEHVQRVAQISRLVPYVTDKASSVPAVGKVFGLGVAGYLGSAL EIEAVAFPAHVPGKGYYRFNDTAGSMAKDSMFNAAAVVRSVTGKELSDYDVHINFVGGGN IDGPSAGCAVTTALISAITGTPIRQDAALTGEISVQGRVKPVGGVFEKAYGAKQAGMKSM VIPKENEKDIPADHLQLQIHPVETIQEVLAFMLVK >gi|290781550|gb|ADGP01000018.1| GENE 27 23265 - 23711 448 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121534992|ref|ZP_01666810.1| ribosomal protein L9 [Thermosinus carboxydivorans Nor1] # 1 145 1 145 148 177 60 1e-43 MKVILLQDVKKLGKKGEIVEVSEGYGRNFLLPRKLAAPGTAENINDAQQKKAAARHKEQV ASDEAVLLASQLKKVSLRIPVKVGEGGKVFGAITGKQISEAAKEQYGITIDKKKVEMKEV IKSLGTYQVVIRVHPTITGVIQVQVVEG >gi|290781550|gb|ADGP01000018.1| GENE 28 23708 - 25729 665 673 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 [Acholeplasma laidlawii PG-8A] # 16 650 43 651 818 260 28 1e-93 MLKKMLSPQTEQPFFWIIVILLAVIAVYNWIISLLALILSIGAYLLTRKNSNERNLAMQQ LLDSISQGVDQASTYAVQNLPIGIAIVDMQGTICWANSVFRDWVGELDAEQQLKQILPNL NLDKFWGKFGSFFETMRERQYRVVYKYLQTEEASEDNYLILYFEDISETETQKRNCLQTV PAFCDIEIDNMEEVSKGLSAVQQATLWTNVNNCLLDELTALGGFVRSYGNAKYFACLTHK ALQTLQADNFSFFEKIRKIHTVNRIPVTISMGIAAAPEERVVAGRADFNELAEKARAGLD LALGRGGDQAVVYEADGTPHFYGGKTRSVEKNTRVRARVVAQAVRELVDTSERVLIMGHE REDYDSIGAAVGVAHMARSLGKPVHIIVSKQTDAIQRLKEQISDRPEFKDLFISAETAES LCNAATLLFVVDTHRPYMTVAPNVLDLTERRVVIDHHRRSSDFIQKPLLTYLEASSSSTC ELVTELLQYYQEEVELEKIEATALYAGIIVDTKNFAVQTGVRTFDAASYLRRSGADPEIV RALFSSDFESLKNRAKILSAAHISEGIALAICPPGVKNAMILAAQCADTLVNIEHVQAGF TFYELANDCIGVSARSKGDINVQLVMEALGGGGHRTVAGAQLKGKTIAGAQEEVVRAVRA QMKENHAKEIDKG >gi|290781550|gb|ADGP01000018.1| GENE 29 25748 - 26692 787 314 aa, chain - ## HITS:1 COG:BH4032 KEGG:ns NR:ns ## COG: BH4032 COG4241 # Protein_GI_number: 15616594 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 18 309 19 305 312 59 23.0 8e-09 MKPISRRDLLYIILSMFVLTLGTVFIPFFSFFAMCVMPVPVVWMYMRATWRETAALAIGA VILTVYWGGSYGGTVETGFFCLSGMIMGFGLRKRRSFFHCWGSGFIVLCAMAAVLAIRLY VVQGVTVFTYVQQFVILWGERLTAMATAQGMGEADKVALQTQLQSLWHTVPYMVPSLLVE IFSLSAWITLRLAIFQLHRQGQKAVSFLPVRCWDMGRGMVYLYIVSLVLKYWGTTRSWIW VQWTGENLLQIAFFFICVQGISFLFSFLQARKKSVVFQGLVLLLFFCIPFFSYIVFVLGL ADLLFSYRRNKAVL >gi|290781550|gb|ADGP01000018.1| GENE 30 26791 - 28452 2180 553 aa, chain - ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 3 553 4 555 555 638 58.0 0 MAKKEKLMIIPLGGLGEIGKNMTVIQYGDDIVVVDAGLAFPDDDMFGIDLVIPDISYLIE NRDKVRAVVITHGHEDHIGSLAYLLNEVNVPVYATKLVCGLIEGKLKENHISRYTLHEVH HGDEVQIASMRVGFIHTNHSIPDASALYFKTPVGTVVHTGDWKMDLTPVDGRQMDIHKFA ELGRRGVLLLMSDSTNAERPGYTESETTVGHAFRKAFREAEGRIILATFASNISRIQQAI NTAAQFNRKVTVLGRSMVNNVQIATELGYLEVPQGMLIEPDELNRYSADQVLILTTGSQG EPMAGLSRMASNNHRTVTIMPGDTVIISATPIPGNETGVSRTIDNLLKLGAKVVAGRDKK IHVSGHASQEELKIMLELIKPKFFLPVHGEYRMLRLHGDLAVMMGVEPDHVLIGDNGQVF EFTGRSGRKAGRVNAGRVFVDGLGVGDVGNIVIRDRQQLAMEGMVVVVMTLAKGTCHVVA GPDIVSRGFVYVRDSEALMEEAHERVAAVLERCETGNIREWSTIKSQVRDTLSRYLYEKT RRRPMILPIIMEV >gi|290781550|gb|ADGP01000018.1| GENE 31 28678 - 29604 897 308 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968394|ref|ZP_06559934.1| ## NR: gi|290968394|ref|ZP_06559934.1| hypothetical protein HMPREF0889_0171 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0171 [Megasphaera genomosp. type_1 str. 28L] # 1 308 1 308 308 597 100.0 1e-169 MMWKRMIGKLRYIGVLAFMAAGVCAGSAATTYADAPVVSPAWRQAVQETAKANIREIEIH VAGEAPIVGAAYAKIQMHADATDRLQGVADIAVFGAVNEQFQIPFYGERKDRTYVFYYKL PEAVGGFWLKYAVPNVPVNTPLFQSRNEDYAARAREIEPHVFQVVYNRQSYERALTYMEK AQNDTPAVRNLSAAFDAVNLPAITLYVRVDPESRRIVHAEGDLTSQLPLLMQSLQPMLAR MKTPLAGYNLVQRALQQSKLCFFVTYHYGTPEPVTIPMTVKEQAKEIVAPQNQRRTQDFF GQVNRKSL >gi|290781550|gb|ADGP01000018.1| GENE 32 29635 - 30435 892 266 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 259 4 262 265 231 47.0 1e-60 MKHVLSIAGTDPSGGAGAAADCKTICAHGCFALNTITAVVAQNTQGVREYMDVPPSLIAA QLDAVFEDIPVHAVKIGMVSVPETIRVIAAKIAQYKPPFTVVDPVMVATGGQRLLAPEAE RVLQEELIPGATLLTPNIPEAEVLVRRPISTLDDMETAARMIAAMGAKAVLIKGGHRIED ATDILYDGTQCHYFPGKHIESTGTHGTGCSLSSAVAANLARGLSLTAAVKEAKTYVFRGI CHAPAIGKGHGPIHHFYDLYHTVGWE >gi|290781550|gb|ADGP01000018.1| GENE 33 30449 - 30949 413 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968396|ref|ZP_06559936.1| ## NR: gi|290968396|ref|ZP_06559936.1| putative phosphohistidine phosphatase SixA [Megasphaera genomosp. type_1 str. 28L] putative phosphohistidine phosphatase SixA [Megasphaera genomosp. type_1 str. 28L] # 1 166 1 166 166 326 100.0 3e-88 MRIFLMRHGEAQLPCAGMADAQRPLSAAGRKQVGTLAHILATVLARRPLTLWSGSYERAV ETAEIIRSRVEVTSFGIHYGAGTGEARGLLPEIVQTATTEDVGIVGHTPFVEQWLYDWTG VRLSFSSPSLAVIQVPIPYENRPSAQLLLYVDKGGLDILSYKERKM >gi|290781550|gb|ADGP01000018.1| GENE 34 30967 - 31344 425 125 aa, chain - ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 38 125 34 121 122 89 50.0 1e-18 MSSIGAMKLEHTEANKSRTQVEREWHLSHDSERLKANIQELANNFKVLGDPTRLRILQAL MHGERCVRELADGIQMEQSAVSHQLRTLRDAGLVNFRRDGKVVYYSLADAHVFTLLSVGI EHVAE >gi|290781550|gb|ADGP01000018.1| GENE 35 31451 - 31951 459 166 aa, chain - ## HITS:1 COG:CAC0951 KEGG:ns NR:ns ## COG: CAC0951 COG0735 # Protein_GI_number: 15894238 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 10 150 2 140 143 75 31.0 5e-14 MVNKKYMGEDYGEYLHRYGLKSTRTRNMVLHMLLENSSILTAEQVYHQLTTDGQRINFST VYRILEMFTEKKVTVKTLLPDSRKYGFALRASGHTHRLICLRCHKIVEIADCPLSEFENH LATETNFQIAGHHLEIYGYCGVCQKERLEEARACSAAACCSTKDAK >gi|290781550|gb|ADGP01000018.1| GENE 36 31957 - 32769 1183 270 aa, chain - ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 252 4 255 268 218 53.0 1e-56 MFEYTFMQNAFIVSVLISVVCPLIGIFLVLRRYAMIGDTLAHASLAGVAMGLLVRENPIV SAFFVTSFFGVSIEILRQRFRRYAELILVIILSLSVGIAITIISSGAVHANVESFLFGSI LTVSREDVWSVVILSVASIVTVWKLYPQLVLLTFDEEGAVIAGVHSKWINYIFSILVAAT ISVSIRIVGILVISSLIALPVATALQLGQGFRTTMGAAVVVSFIDIISGLTVSYWLNTAP GGMTAIISVLFLVLVMVCKEMQKIKQEKRR >gi|290781550|gb|ADGP01000018.1| GENE 37 32762 - 33436 199 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 205 4 223 223 81 25 1e-14 MISFQHVYFSYERGAGLLNDIDFTIRDGDYVSIVGENGSGKSTLVKLILGLLKPTQGKIV NSFSRCAYVPQRFESLNSQFPITVFEVLDCYRKALRLKHKEDTLASLEQMKVSHLRNRLI GSLSGGQCQKVMIARALLGNPEMLVFDEPSTGIDVQSQWELYPFIKKLNRCKGITVITVE HNLKFAVQHATKMLHVSGGVCHGCAPQEYVREFLSAAVGSEYHV >gi|290781550|gb|ADGP01000018.1| GENE 38 33627 - 34547 1090 306 aa, chain + ## HITS:1 COG:CAC1593 KEGG:ns NR:ns ## COG: CAC1593 COG0803 # Protein_GI_number: 15894871 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Clostridium acetobutylicum # 1 306 1 298 298 325 53.0 8e-89 MLKKWITAAILGITAAVMLTACGGGNQQGEQTAQPATKIKVATSFNAMKEFVQVVGKDKV DVVTIIPDGTEPHDFELTTKDMKALSNADVFVYSGLGMEPWADQAIQSANNKKLLAVEAS KGVKAITNTDEDEIKEHGQYDPHCWLGLNEAQIEVQNIADGLAKADPKNADFYQKNAKDY IAQLKALHDQYAGKFARVQKKHFVTGHAAFAYLCRDFGLTQNSVEDVFADGEPSPKQMAA LITYCKKHDVKVIFAEDMVSPKISQTLAAEVGAQVKQINTMESSEGGKTYLNAMKENLEE ILQSLQ >gi|290781550|gb|ADGP01000018.1| GENE 39 34653 - 35279 527 208 aa, chain - ## HITS:1 COG:Cgl2827 KEGG:ns NR:ns ## COG: Cgl2827 COG5479 # Protein_GI_number: 19554077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 74 201 280 440 692 67 27.0 2e-11 MNKLSRREFLWKSLLVIGGLTVGTSLFPSLADAAGIQVKEDLQEKQGDAVRLRIQRPKLV FAEDLQPRMETKRIVMHHIGGTNREVKAAEIHQWHLQNGWAGIGYHFVIHKDGSIEQGRP MDVIGAHCHRYNADSVGICSVGNFQQYYPTESQLATAAKLIAYVCSVYGLTPDKQTVFGH RDLNDTECPGDHYYVQLDRLRLEASRYL >gi|290781550|gb|ADGP01000018.1| GENE 40 35651 - 35935 315 94 aa, chain - ## HITS:1 COG:FN1545 KEGG:ns NR:ns ## COG: FN1545 COG2440 # Protein_GI_number: 19704877 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Fusobacterium nucleatum # 1 94 1 94 94 132 67.0 1e-31 MAKMSIDDKLGFVKFVTDEHESHILIDEEYADEAEIKRLVMACPAELYKYIDGKLTFSHE GCLECGTCRVLAGGKGVKSWTHPKGAMGVEFRQG >gi|290781550|gb|ADGP01000018.1| GENE 41 35937 - 37232 1660 431 aa, chain - ## HITS:1 COG:FN1544 KEGG:ns NR:ns ## COG: FN1544 COG0644 # Protein_GI_number: 19704876 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Fusobacterium nucleatum # 3 405 2 405 431 463 60.0 1e-130 MSSEEKFDAIVVGGGLAGSAAALAMARGGLDVMLVERGKFCGAKNTSGGRLYGHSLEKLV PNFAEEAPIERKITQERLSLMTAGGALSFQYESENLHNLKYPSYSVLRSKFDKWLADKAE EEGVMVATGLLVDELVVEDGKVIGINCGGEEVDADVVILADGVNSLLAQKLGMKQELAAK DVAVGVKEVIELGEDVINERFGLRNGEGAAWMIAGDPTGGNLGGGFIYTNKTSLSVGIVT TISDIGRVDVSVPDMVERMKNHPSVAPFVKGGKLAEYSAHLVTEGGLKMMPELVRDGVIV TGDAAAMVVNLGYTVRGMDLAIESGRLAGEAAVMAKKRNDFSAASLSVYKTMLDGSFVMK LMKQYQNLPGLLEDHLIFNDIPKMADEFAGMVYKVEGGNPVALPMIGLSVLANNGGLNGL FGLGKKAWEAM >gi|290781550|gb|ADGP01000018.1| GENE 42 37279 - 37992 244 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 13 232 1 221 221 98 30 6e-20 MANLSKAEKVYTVFEHIARTYDRGNKRISLGRERVWKEALIQRVCAYVPEAGAILDVCCG TGDIAIGIADKRPQCRVWGLDFSPAMLQRAQEKSKGIKNVLWKKGDAVHLPFPTAYFDSA VISFGLRNTPDYGRVLQEMSRVVKAGGTIWCLDSFLPESRWIRPWYSLYFHYVMPVLGGG RRCRQEYRWLWESTCRFINRRELERLFVQAGLTLLKHSSYMFGACLLQGGLKDSHRK >gi|290781550|gb|ADGP01000018.1| GENE 43 37985 - 38899 1028 304 aa, chain - ## HITS:1 COG:FN1542 KEGG:ns NR:ns ## COG: FN1542 COG1575 # Protein_GI_number: 19704874 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Fusobacterium nucleatum # 1 289 6 293 306 236 44.0 3e-62 MTMRQAWNLAAPHTWPATLIPVALGELYCVAHQYALSLSTAIALTAACLAMQAAVNTLND YFDFVKGTDKPEDRVAADDAVLVYGQVPPRQALLLGIFFLAVAAVIAIPRLLQAGIVPVE IGVIGAITVLLYSGGKMPISYLPFGEVVSGVVMGGGIPLGIIAVVTGRWEVQVLFWAVPV IIGISLIMMTNNTCDVERDRRSGRKTLPVILGRARARHWYRRLVALWLFTLAVCGTVYMG AGTLVMGLGLWLLGKKFFIRMFTASLTATERLQQMRTVVGANLLCGIAYTGILGVVVLGG ALHG >gi|290781550|gb|ADGP01000018.1| GENE 44 38917 - 39930 1217 337 aa, chain - ## HITS:1 COG:FN1541 KEGG:ns NR:ns ## COG: FN1541 COG0142 # Protein_GI_number: 19704873 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 23 322 10 309 326 262 41.0 8e-70 MKEKGPLTTCIRQVLGGVSDAQLNKVKQYMKQFTAHSFADTATGAVLQDAVSSQGKMIRP RLVIMAGSFGKRYAEAEERLYKAAALIEMTHSASLIHDDIVDEAPLRRGKPSVQRRYGKS AAVYAGDFLMSRITYHLMQEGLMQSGMVLAKAVEAMCAGEITQALCRYRADVTLAEYLQN IYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMFQMRDDLLDFLPVTEQIGKA SHQDFREGIYTMPVLYACETPQGRKMLRPYMERSVQGCLTGQDIAEMERQVAALGGMERT WQAIREQQKKAERILADLPSHSASPQLLKLVRKLGCL >gi|290781550|gb|ADGP01000018.1| GENE 45 39961 - 42123 2148 720 aa, chain - ## HITS:1 COG:FN1540_1 KEGG:ns NR:ns ## COG: FN1540_1 COG1139 # Protein_GI_number: 19704872 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Fusobacterium nucleatum # 1 464 1 463 463 587 61.0 1e-167 MSNELLKQEIERAMENAPLQKALKNFTGAYPGNRERVYKGYDFEELREKVHEVKSYARDH IDDMIAEFIKNATANGANVFVAHSAQEAFDHALQLAKDNNVKLAVKSKSMASEEIHFNQG FEKAGIHAQETDLGEFINSIAGDSPSHMVMPAIHYSKEDVADLFSSYTKAPEAPIIAEEV KTSRRLMRPKFLEAEMGVSGANVAVAETGSVFTMTNEGNARMVGTLPKMHLFIFGIEKFV AKMSDVRYIFKVLPRNGTAQNITAYLSAYTGASTVVTDAENDTKEQKNFQIIILDTPERR KIMESEDYKDMACCVRCAACLNVCPAFRLVGGHVYGGSIYTGGIGTLLTSFLNNRERGKD IQNICLQCGTCNTVCGGKLDVAGMILKLRTKFAQEDGLNPVHKFCLDTVADRHLFHSMLR IASVAQSAITKGQPMIRHLPMFLSGLTEGRSLPSVAPQPFRDILPSIKQDVPNPKGKIAI FTGCVLDFVYVDIATSVVKALNMAGYTVEMPLDQACCGAPATYMGDVENAKKAAAMNVEA MAADEYDYIVSACPTCTHALREYKEFFKDEPEMYKKAEAVGKKTFDFSKLLSMLGGLESE GDGKEVKVTYHDSCHMKRALGVSEEQRELLKKTKGVELVEMEGCDKCCGFGGSYSIKYPE MAGPILQEKIQHIVDTGAEVVAVDCPGCMLQIRGGLDARGLGNIKVKHTAELLVEKRPQA >gi|290781550|gb|ADGP01000018.1| GENE 46 42139 - 42684 687 181 aa, chain - ## HITS:1 COG:FN1539 KEGG:ns NR:ns ## COG: FN1539 COG1556 # Protein_GI_number: 19704871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 4 180 6 182 183 186 50.0 2e-47 MEKDAVYEVFQKGLTNVNGECYLAKAAEVGATLAKIFQAKETTSVSVVESELFREVGVVK ALQQAGITVHTDHFRKYSPDDKGGVTEADYGIANLGSIVQLKDDIDCRIVEIASDVYVGV IKLSRILDDFDAMIDVMAATKPFPRFAGVITGPSRTADIECVGTVGVHGPRQYSVIVVED R >gi|290781550|gb|ADGP01000018.1| GENE 47 43206 - 43577 562 123 aa, chain - ## HITS:1 COG:TM1434 KEGG:ns NR:ns ## COG: TM1434 COG3862 # Protein_GI_number: 15644185 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Thermotoga maritima # 6 121 3 119 138 99 41.0 2e-21 MKVETKQMNCIMCPMGCLLTVTLTDGAVSDVTGNTCPRGEVYARQEVTDPQRMLTTTVRV EGGALALLPVVSQTTLPKGKIMACAEALRQVSVKAPVHTGDVVVSDILGLGVDIIAARDM RCG >gi|290781550|gb|ADGP01000018.1| GENE 48 43579 - 44847 1366 422 aa, chain - ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 6 397 3 392 417 417 58.0 1e-116 MNEQIYDIIIVGGGPAGLSAAYSACLHGAKKILILERDREVGGILQQCIHNGFGLHHFKE ELTGPGYAQRCYDLIKDRSEVTILVDTMVLQVSAEKIVTAVSPTEGVLHIKGKTIILTMG CRERTRGAIRIPGYRPAGVFTAGAAQRMVNMEGYLPGKKIVILGSGDIGLIMARRMSLEG CKVQAVLEICPFSNGLTRNMVQCLYDYDIPLYLSHTITAIHGKDRVAGITAAKVDEHMKP IAGTEFDIDCDTLLLSVGLIPENELSRGLGLTLHPLTNGPIVDQHRETDIPGIFAAGNVV HVHDLVDFVSEEAEIAGKYAALKARESERQVVADVAVSAVDEVRTCVPQHIRATADGEMI RLFMRVRKPMKNVRLSVKSGDTVLLTKPLQVAKPSEMIAVNIPASKARGQHREWTVSVKE EA >gi|290781550|gb|ADGP01000018.1| GENE 49 44847 - 46313 1672 488 aa, chain - ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 6 480 25 496 498 411 47.0 1e-114 MIKKADVVIIGGGITGTAILYELAKYDLKAVLVEAEPELAAGTTKANSAILHAGFDAPTG SLKARMNVAGNARYHELQKELDLDIRWSGSYVAALDEEQEQVLQELLVRGRANGVPGLKI IDGNTMRREEPNVSPEIRAALWAPTAGICWPFGLATAFAENAVINGAEVIRDCAVTDILV ADGVVRGVQTEAGYIAADYVINAAGVHADDVSRMAGDTSFTICPRKGEYILFDKTAQKDL VYSPIFPTPTKMGKGILVCATTHGNVFVGPNAQDLEVGEKDDTAVTIAGMDDILEKARRL VPKLPVGASITEFAGVRAVSDTGDFVLGPSRTVRGLIQAAGIQSPGLTSAPAIADYIVTP LVTVRGIRRKANYKKGRPAQPCFRLLSTAEQQARIAKDSRYGRVICRCETITEGEIVDAI RRPVGARTVDGVKRRTRAGMGRCQGGFCGPRVTEILARELHIPVTKVRKEMRASYMFYDK QTQSGGKA Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:40:09 2011 Seq name: gi|290781409|gb|ADGP01000019.1| Megasphaera genomosp. type_1 str. 28L contig00064, whole genome shotgun sequence Length of sequence - 156177 bp Number of predicted genes - 139, with homology - 138 Number of transcription units - 53, operones - 25 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1024 1220 ## Vpar_1664 S-layer domain protein + Term 1100 - 1137 8.0 + Prom 1218 - 1277 10.2 2 2 Tu 1 . + CDS 1413 - 3905 2377 ## COG5295 Autotransporter adhesin + Term 4016 - 4063 10.3 + Prom 3977 - 4036 3.6 3 3 Tu 1 . + CDS 4211 - 4738 88 ## gi|290968416|ref|ZP_06559955.1| hypothetical protein HMPREF0889_1548 + Prom 4799 - 4858 10.8 4 4 Tu 1 . + CDS 4947 - 9860 5517 ## COG5295 Autotransporter adhesin + Term 9878 - 9920 12.1 + Prom 9897 - 9956 8.2 5 5 Op 1 . + CDS 10012 - 11001 965 ## COG1242 Predicted Fe-S oxidoreductase 6 5 Op 2 17/0.000 + CDS 10985 - 11959 1284 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 7 5 Op 3 1/0.000 + CDS 11956 - 12429 816 ## COG0319 Predicted metal-dependent hydrolase 8 5 Op 4 6/0.000 + CDS 12426 - 12818 508 ## COG0295 Cytidine deaminase 9 5 Op 5 1/0.000 + CDS 12834 - 13733 1029 ## COG1159 GTPase 10 5 Op 6 . + CDS 13746 - 15101 1641 ## COG1253 Hemolysins and related proteins containing CBS domains 11 5 Op 7 . + CDS 15067 - 15783 747 ## gi|290968424|ref|ZP_06559963.1| putative DNA repair protein RecO + Term 15803 - 15844 1.7 + Prom 15805 - 15864 8.0 12 6 Op 1 . + CDS 15959 - 16270 391 ## PROTEIN SUPPORTED gi|238926183|ref|ZP_04657943.1| ribosomal protein L21 13 6 Op 2 . + CDS 16270 - 16605 183 ## PROTEIN SUPPORTED gi|238926182|ref|ZP_04657942.1| possible ribosomal protein 14 6 Op 3 . + CDS 16598 - 16888 433 ## PROTEIN SUPPORTED gi|227372241|ref|ZP_03855723.1| LSU ribosomal protein L27P + Term 16897 - 16941 8.2 15 7 Tu 1 . + CDS 16957 - 17355 663 ## gi|290968428|ref|ZP_06559967.1| conserved domain protein + Term 17408 - 17439 2.5 - Term 17389 - 17435 7.1 16 8 Tu 1 . - CDS 17453 - 18406 1101 ## COG0598 Mg2+ and Co2+ transporters - Prom 18446 - 18505 8.7 + Prom 18382 - 18441 8.0 17 9 Tu 1 . + CDS 18602 - 19384 873 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Prom 19422 - 19481 3.6 18 10 Tu 1 . + CDS 19538 - 21025 1167 ## Vpar_1148 KWG repeat protein + Term 21137 - 21182 -0.9 + Prom 21129 - 21188 4.4 19 11 Op 1 15/0.000 + CDS 21248 - 21844 707 ## COG1309 Transcriptional regulator 20 11 Op 2 27/0.000 + CDS 21828 - 22964 1609 ## COG0845 Membrane-fusion protein 21 11 Op 3 . + CDS 22976 - 26110 3255 ## COG0841 Cation/multidrug efflux pump + Term 26111 - 26158 14.5 + Prom 26149 - 26208 6.3 22 12 Tu 1 . + CDS 26244 - 27581 1586 ## COG0534 Na+-driven multidrug efflux pump + Term 27653 - 27684 2.5 + Prom 27583 - 27642 4.7 23 13 Tu 1 . + CDS 27699 - 28697 1001 ## Olsu_1160 hypothetical protein + Term 28814 - 28856 3.1 + Prom 28808 - 28867 11.5 24 14 Op 1 . + CDS 29100 - 30956 1807 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 30990 - 31049 7.1 25 14 Op 2 . + CDS 31149 - 32612 1490 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 32623 - 32672 12.8 + Prom 32753 - 32812 3.8 26 15 Op 1 6/0.000 + CDS 32904 - 34262 409 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 27 15 Op 2 . + CDS 34335 - 35447 1181 ## COG1454 Alcohol dehydrogenase, class IV + Term 35482 - 35528 7.5 + Prom 35554 - 35613 9.5 28 16 Op 1 9/0.000 + CDS 35732 - 37351 1648 ## COG3275 Putative regulator of cell autolysis 29 16 Op 2 . + CDS 37411 - 38163 891 ## COG3279 Response regulator of the LytR/AlgR family + Term 38260 - 38307 4.2 + Prom 38400 - 38459 10.3 30 17 Tu 1 . + CDS 38510 - 39808 756 ## COG1373 Predicted ATPase (AAA+ superfamily) 31 18 Tu 1 . - CDS 39658 - 39942 126 ## - Prom 40179 - 40238 14.2 32 19 Tu 1 . + CDS 39845 - 40129 102 ## HMPREF0868_0084 hypothetical protein + Term 40146 - 40183 6.4 + Prom 40229 - 40288 6.7 33 20 Op 1 . + CDS 40320 - 41894 1611 ## Vpar_0556 S-layer domain protein 34 20 Op 2 . + CDS 41909 - 44242 1767 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 44302 - 44351 12.6 + Prom 44474 - 44533 7.3 35 21 Tu 1 . + CDS 44577 - 44867 117 ## gi|290968449|ref|ZP_06559988.1| conserved domain protein 36 22 Op 1 26/0.000 + CDS 44998 - 45264 317 ## PROTEIN SUPPORTED gi|121535267|ref|ZP_01667081.1| ribosomal protein S15 + Term 45277 - 45314 6.2 37 22 Op 2 2/0.000 + CDS 45414 - 47564 208 ## PROTEIN SUPPORTED gi|209559262|ref|YP_002285734.1| SSU ribosomal protein S1p 38 22 Op 3 2/0.000 + CDS 45414 - 47564 180 ## PROTEIN SUPPORTED gi|52080799|ref|YP_079590.1| 30S ribosomal protein S1 39 22 Op 4 . + CDS 47571 - 48017 564 ## COG0756 dUTPase + Term 48023 - 48067 9.6 40 23 Op 1 . + CDS 48078 - 48626 652 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 41 23 Op 2 4/0.000 + CDS 48646 - 49827 1232 ## COG1015 Phosphopentomutase 42 23 Op 3 . + CDS 49837 - 51150 1446 ## COG0213 Thymidine phosphorylase 43 23 Op 4 . + CDS 51187 - 52569 1181 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 52689 - 52748 2.5 44 24 Tu 1 . + CDS 52793 - 54271 651 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 45 25 Tu 1 . + CDS 54375 - 54665 118 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 55035 - 55094 3.0 46 26 Tu 1 . + CDS 55178 - 55354 199 ## Swol_2222 transposase 47 27 Tu 1 . + CDS 56369 - 56848 368 ## COG2608 Copper chaperone + Prom 57378 - 57437 6.6 48 28 Op 1 5/0.000 + CDS 57578 - 57940 436 ## COG0640 Predicted transcriptional regulators 49 28 Op 2 . + CDS 57997 - 60351 958 ## COG2217 Cation transport ATPase + Prom 60353 - 60412 2.8 50 29 Op 1 . + CDS 60449 - 60886 374 ## gi|253578327|ref|ZP_04855599.1| conserved hypothetical protein 51 29 Op 2 . + CDS 60897 - 61436 213 ## CKR_0690 hypothetical protein 52 29 Op 3 36/0.000 + CDS 61433 - 62977 941 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 63088 - 63147 4.0 53 29 Op 4 . + CDS 63169 - 63684 45 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 63715 - 63754 6.3 + Prom 64058 - 64117 3.0 54 30 Op 1 . + CDS 64159 - 64857 451 ## COG1373 Predicted ATPase (AAA+ superfamily) 55 30 Op 2 . + CDS 64898 - 65788 640 ## HMPREF0868_0084 hypothetical protein + Term 65809 - 65838 0.5 + Prom 66175 - 66234 6.5 56 31 Op 1 . + CDS 66271 - 66486 246 ## CD1864 putative conjugative transposon regulatory protein 57 31 Op 2 . + CDS 66526 - 68625 1486 ## COG0270 Site-specific DNA methylase 58 31 Op 3 . + CDS 68618 - 69490 457 ## gi|290968469|ref|ZP_06560008.1| hypothetical protein HMPREF0889_1601 59 31 Op 4 . + CDS 69480 - 69983 264 ## gi|153814226|ref|ZP_01966894.1| hypothetical protein RUMTOR_00435 60 31 Op 5 . + CDS 70020 - 72608 934 ## Desac_0721 hypothetical protein + Term 72690 - 72731 5.0 61 32 Tu 1 . - CDS 72611 - 73591 338 ## SZO_12770 relaxase/mobilisation protein 62 33 Tu 1 . - CDS 74082 - 74303 99 ## HS_0428 hypothetical protein - Prom 74387 - 74446 2.8 + Prom 74596 - 74655 7.7 63 34 Tu 1 . + CDS 74688 - 75260 426 ## COG1309 Transcriptional regulator + Term 75277 - 75311 0.5 + Prom 75277 - 75336 5.9 64 35 Op 1 35/0.000 + CDS 75364 - 77103 184 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 77147 - 77206 4.2 65 35 Op 2 1/0.000 + CDS 77312 - 78811 197 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 79005 - 79064 5.6 66 35 Op 3 . + CDS 79084 - 80358 450 ## COG1373 Predicted ATPase (AAA+ superfamily) 67 35 Op 4 . + CDS 80402 - 80605 192 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 81079 - 81138 6.0 68 36 Op 1 39/0.000 + CDS 81238 - 82083 767 ## COG0226 ABC-type phosphate transport system, periplasmic component + Term 82100 - 82140 10.8 69 36 Op 2 38/0.000 + CDS 82148 - 83014 486 ## COG0573 ABC-type phosphate transport system, permease component 70 36 Op 3 41/0.000 + CDS 83018 - 83878 361 ## COG0581 ABC-type phosphate transport system, permease component 71 36 Op 4 32/0.000 + CDS 83879 - 84655 214 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 72 36 Op 5 7/0.000 + CDS 84655 - 85326 533 ## COG0704 Phosphate uptake regulator 73 36 Op 6 40/0.000 + CDS 85301 - 85981 553 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 74 36 Op 7 . + CDS 85971 - 87635 965 ## COG0642 Signal transduction histidine kinase + Prom 87691 - 87750 6.9 75 37 Tu 1 . + CDS 87816 - 88097 322 ## gi|290968485|ref|ZP_06560024.1| hypothetical protein HMPREF0889_1617 + Term 88109 - 88144 5.3 - Term 88384 - 88432 3.1 76 38 Tu 1 . - CDS 88505 - 89899 1739 ## COG2252 Permeases - Prom 89937 - 89996 3.6 + Prom 89964 - 90023 8.4 77 39 Op 1 4/0.000 + CDS 90128 - 91018 1199 ## COG1561 Uncharacterized stress-induced protein 78 39 Op 2 4/0.000 + CDS 91028 - 91312 334 ## COG2052 Uncharacterized protein conserved in bacteria 79 39 Op 3 . + CDS 91315 - 91932 616 ## COG0194 Guanylate kinase 80 39 Op 4 . + CDS 91950 - 92159 384 ## STH1340 RNA polymerase omega subunit 81 39 Op 5 4/0.000 + CDS 92177 - 93406 1502 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase + Term 93573 - 93608 1.1 + Prom 93516 - 93575 3.6 82 39 Op 6 2/0.000 + CDS 93617 - 94810 1482 ## COG0192 S-adenosylmethionine synthetase + Term 94865 - 94906 10.1 + Prom 94812 - 94871 2.4 83 40 Op 1 4/0.000 + CDS 94921 - 97281 2223 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 84 40 Op 2 26/0.000 + CDS 97307 - 97822 560 ## COG0242 N-formylmethionyl-tRNA deformylase 85 40 Op 3 20/0.000 + CDS 97819 - 98757 768 ## COG0223 Methionyl-tRNA formyltransferase + Term 98776 - 98810 1.1 86 40 Op 4 4/0.000 + CDS 98832 - 100160 1033 ## COG0144 tRNA and rRNA cytosine-C5-methylases 87 40 Op 5 5/0.000 + CDS 100162 - 101199 966 ## COG0820 Predicted Fe-S-cluster redox enzyme 88 40 Op 6 17/0.000 + CDS 101257 - 101967 840 ## COG0631 Serine/threonine protein phosphatase 89 40 Op 7 7/0.000 + CDS 101978 - 103918 2000 ## COG0515 Serine/threonine protein kinase 90 40 Op 8 10/0.000 + CDS 103938 - 104795 820 ## COG1162 Predicted GTPases 91 40 Op 9 4/0.000 + CDS 104797 - 105444 735 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 105455 - 105487 -0.8 + Prom 105640 - 105699 5.6 92 40 Op 10 16/0.000 + CDS 105738 - 106874 1176 ## COG0117 Pyrimidine deaminase 93 40 Op 11 2/0.000 + CDS 106855 - 107505 578 ## COG0307 Riboflavin synthase alpha chain 94 40 Op 12 . + CDS 107533 - 107997 834 ## COG0054 Riboflavin synthase beta-chain + Term 108005 - 108034 1.1 + Prom 108211 - 108270 8.5 95 41 Op 1 8/0.000 + CDS 108296 - 109159 1061 ## COG1161 Predicted GTPases 96 41 Op 2 . + CDS 109156 - 109950 879 ## COG0164 Ribonuclease HII 97 41 Op 3 3/0.000 + CDS 109961 - 110416 545 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 98 41 Op 4 . + CDS 110413 - 111147 652 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 111166 - 111215 10.6 - Term 111270 - 111309 7.0 99 42 Op 1 . - CDS 111357 - 113255 1397 ## COG0171 NAD synthase - Prom 113306 - 113365 4.6 100 42 Op 2 . - CDS 113367 - 113930 472 ## COG0655 Multimeric flavodoxin WrbA - Prom 114082 - 114141 7.2 + Prom 114041 - 114100 7.3 101 43 Op 1 5/0.000 + CDS 114150 - 114605 189 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 102 43 Op 2 7/0.000 + CDS 114621 - 115070 503 ## COG3880 Uncharacterized protein with conserved CXXC pairs 103 43 Op 3 . + CDS 115083 - 116126 383 ## PROTEIN SUPPORTED gi|163764772|ref|ZP_02171826.1| ribosomal protein L5 104 43 Op 4 2/0.000 + CDS 116113 - 117504 1463 ## COG1066 Predicted ATP-dependent serine protease 105 43 Op 5 . + CDS 117596 - 118780 804 ## PROTEIN SUPPORTED gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 106 43 Op 6 3/0.000 + CDS 118788 - 119969 1427 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 107 43 Op 7 1/0.000 + CDS 119992 - 121449 1624 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 108 43 Op 8 8/0.000 + CDS 121764 - 123209 1652 ## COG0215 Cysteinyl-tRNA synthetase 109 43 Op 9 7/0.000 + CDS 123206 - 123682 191 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 110 43 Op 10 6/0.000 + CDS 123691 - 124443 575 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 111 43 Op 11 5/0.000 + CDS 124440 - 124979 660 ## COG3688 Predicted RNA-binding protein containing a PIN domain 112 43 Op 12 . + CDS 124986 - 125675 853 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 113 43 Op 13 . + CDS 125720 - 125956 402 ## gi|290968524|ref|ZP_06560063.1| preprotein translocase, SecG subunit + Term 125969 - 126001 7.0 114 44 Op 1 10/0.000 + CDS 126009 - 128312 1305 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 115 44 Op 2 . + CDS 128325 - 128795 412 ## COG0691 tmRNA-binding protein 116 44 Op 3 . + CDS 128806 - 129153 357 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 129165 - 129207 4.9 + Prom 129319 - 129378 5.0 117 45 Op 1 . + CDS 129410 - 130294 1017 ## COG1281 Disulfide bond chaperones of the HSP33 family 118 45 Op 2 . + CDS 130297 - 131091 857 ## COG0005 Purine nucleoside phosphorylase 119 45 Op 3 . + CDS 131095 - 132156 1053 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 120 45 Op 4 2/0.000 + CDS 132177 - 133418 1663 ## COG0499 S-adenosylhomocysteine hydrolase 121 45 Op 5 . + CDS 133435 - 134718 1472 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 134732 - 134766 5.2 - Term 134809 - 134872 19.0 122 46 Tu 1 . - CDS 134889 - 135506 665 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 135529 - 135588 8.4 + Prom 135560 - 135619 5.7 123 47 Tu 1 . + CDS 135676 - 136035 254 ## gi|290968535|ref|ZP_06560074.1| LysM domain protein + Term 136059 - 136107 -0.7 + Prom 136129 - 136188 4.7 124 48 Op 1 4/0.000 + CDS 136277 - 137314 803 ## COG1559 Predicted periplasmic solute-binding protein 125 48 Op 2 4/0.000 + CDS 137311 - 137901 653 ## COG4122 Predicted O-methyltransferase 126 48 Op 3 . + CDS 137914 - 139134 1136 ## COG0826 Collagenase and related proteases 127 48 Op 4 . + CDS 139131 - 139382 296 ## gi|290968540|ref|ZP_06560079.1| hypothetical protein HMPREF0889_1675 + Prom 139384 - 139443 1.6 128 49 Op 1 . + CDS 139474 - 141150 1782 ## Acfer_0995 ATP-dependent endonuclease of the OLD family-like protein 129 49 Op 2 . + CDS 141147 - 143291 1965 ## COG0550 Topoisomerase IA 130 49 Op 3 . + CDS 143278 - 144552 745 ## Msm_1762 hypothetical protein 131 49 Op 4 . + CDS 144549 - 145073 513 ## COG0717 Deoxycytidine deaminase 132 49 Op 5 . + CDS 145086 - 146063 1082 ## COG3191 L-aminopeptidase/D-esterase + Prom 146075 - 146134 1.9 133 50 Tu 1 . + CDS 146167 - 146709 843 ## gi|290968546|ref|ZP_06560085.1| hypothetical protein HMPREF0889_1681 + Term 146773 - 146814 8.0 + Prom 146811 - 146870 4.1 134 51 Tu 1 . + CDS 146903 - 147307 567 ## D11S_1226 hypothetical protein + Term 147322 - 147358 6.4 + Prom 147374 - 147433 8.1 135 52 Op 1 . + CDS 147487 - 148503 1287 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 136 52 Op 2 26/0.000 + CDS 148661 - 149686 1362 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 137 52 Op 3 13/0.000 + CDS 149717 - 150898 1436 ## COG0126 3-phosphoglycerate kinase 138 52 Op 4 . + CDS 150916 - 151674 997 ## COG0149 Triosephosphate isomerase + Prom 151821 - 151880 6.6 139 53 Tu 1 . + CDS 152088 - 156177 4757 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|290781409|gb|ADGP01000019.1| GENE 1 2 - 1024 1220 340 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1664 NR:ns ## KEGG: Vpar_1664 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 130 309 489 693 832 78 34.0 4e-13 IWLDKQTDKTKTEQDFFDSLKGEKGATGQTGAIGAAGKSAYQVWKEQQNPDGSKPNENKT EQEFFNSLKGKDGKDGKNGVAAAVTVKASEKGNDIQEAKFVITPQKPEMTFVGDRNIKTL IEKDNTVKIALQDTITAKTIKVGDKVTITKEGATFDKVTIAGNQGSITGLTNTTWDTTRI VSGRAATEDQVQQATQTMQRQMVNDMNGIAAGNAALAGLHPLAYDDRDKWNLSAAIGKYR GADAVAFGAFYRPNETTQVSLSGAFGTGRHMLMNAGVAWKVGGGSLPGSSKMAMARQLAA QQWEIEQLRRKDRERDKEMAAMKEREAQLWKEVALLKSKT >gi|290781409|gb|ADGP01000019.1| GENE 2 1413 - 3905 2377 830 aa, chain + ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 477 1 381 1588 95 27.0 3e-19 MNHWYRVIWSHVKHCYIVVSELAKRDGKSSRHAGKGRLTALVLAALVSLGSGVYAAEPPA ATILTAEQQAVYNAVLQELAKNGVHYISVKGTSKDADTNFNNDGAKQIGDIAIGSEANSA GGWGVAIGEKAKSEGSSDIAIGSEANSAGGWGIAIGEKAKSKGSIDIAIGNEANSAGGWG MAIGANAKNTAQLGMAVGYATKVEAAHGLALGVQASTSGEDAISIGTNVSSSAKRGIAVG TNSNVAATAARGIAIGDGAYVGPVTDKHKGTAMPKPGDEWKPDMPFQPKNDDTKPGKDKT PEENSLAIGMRASAFGYQNVAIGAAAEAHDTNSTAVGVAAVAKGHHSTALGKQARTYGQE TTSVGHWADTRDEFATALGAKSIAYKKGATALGSNARAYDENSVAIGANSIAKEAVDGKA LYTNEDVKAAAGIVSVGHPDYKVGDKEVKANYRRIVNVAGGILDHDAVNVAQLKALAMLP MNMYSGGKVENNTYTPGQAKWSMPLNEFCMDFGDGLKATKVTDKDGKKYTLVTLDKESLK GDPAFKGDKGDKGESGQAGKDGTNGKSAYEIWLETQTDKTKTKQDFLDSLKGKDGKDGTG ADIDINVDTESGVSVKPTTDNAGKKTYTIGFNTKIKAGEVLIDGTKDKENVAVGEVKING EKGKGTITGLSNKTWDPNHIESGRAATEDQLKAATQGMQNCMTDINLHMNGIGASNAALA GLHPLEYDEEDKWDFSASMGNYNGANAFALGAFYRPNVRTMISLGGTLGGKEHMINIGLS MKAGQGTDGKVYASRVAMAKEIKALKEKDAQRDEQIRKLTEMIVKLQHKA >gi|290781409|gb|ADGP01000019.1| GENE 3 4211 - 4738 88 175 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968416|ref|ZP_06559955.1| ## NR: gi|290968416|ref|ZP_06559955.1| hypothetical protein HMPREF0889_1548 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1548 [Megasphaera genomosp. type_1 str. 28L] # 1 175 1 175 175 321 100.0 1e-86 MAITVDKKDPSWGTDYTVQNTNKWYGREKEVLRAPPGKDGKWKTKKAKFFFKTNADTHVL TIGRSRKGRDESINSIYFFYGQESTSYFRRKIIRLYICRTIQMAYVYLHSGLGNKKSQCR AQRRRFGHTEDAGAEKKGLNHWIQTLFLSAARSVFPSYCVRHLVATANGCRSIYS >gi|290781409|gb|ADGP01000019.1| GENE 4 4947 - 9860 5517 1637 aa, chain + ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 1029 1394 194 575 1190 72 28.0 6e-12 MNHWYRVIWSHVKHCYIVVSELAKRDGKSSRHAGKGQLTALVLAALVSLGSGVYAAEPPA ATTLTQDQRAVYNAVLQELAKNGVHYISVKGESQDNDSNYNNNGAQGKGAVAIGEKALAS KGGTVSIGRNAHILGSGGNTDGEGSVAIGDNTLITTNGLDLASIAIGKNAKVLNGSGQQE RGLSFTPDNFNKPDLIAAMMHRENTLPKNADKVPGGIAIGTNTYARTASIQIGAHTFVGY KMGGIDITDKTNDSESNIVGMTTIGTNTYNKGAFANMYGAYSVITGGFTGEGGNNSRTYG PQNFGANVVGSLNSIRSKGHNGSSGVANSIVGVANTVENANGTLVYGAGNKITNSNSYIS APSGILTLNTWEDTVTGLQKVIKDSNSGGAVLAIGGGNTADYVRHSQLVGVNNTVTGEEN KVSEYNMVDGYKNTVTNGKHVTMIGSENTATDSESTVVMGDKQKVTKVKHGVLLGSQDKE TETNVADVVAIGHNAHVEKEGGVALGSGAIAKRDKGAFGYDVATGKVLDEAGAAAALGNS AALKPLAEKYTAAKTAYEQAKQAVDAKQQEVTAIEKVCGKMCIAGENAEKKSKLKHELNK LKATLTEKQKTYEESQTAINNSLYPWKSTAAAVSVGDAEKGITRQITEVAAGTEDTDAVN VAQLKRVLHAVDNNRVHYMAVNGTAQDAVSNYNNDGAKQAGGIAIGESAKSDAVGGIAIG RGVEIGYSGGVPTQASGDIAIGDKAHINNYINQGGSVTIGSHAFSENMTGGEEWDVNFSQ TEYVPNDTWLGVHEPKDPSKVIGSMAIGQNAYSRTGSTMVGMHNYTGKVGDLEVSNDIKM ENLNVYSTTVGSNSYNNGAFATVYGAYSTISSNYDGDKRNNLAQSLGATITGSLNSIEAK TGSDYAGIGNSITGMANRTVNANGALIYGAGNMIQNSWDTIHVGSENSTSAEDFQAKLVA QRKSTASGDSAKGMQEVLMDSVKKSANGGAVIAIGGGNTANYVRHSQLVGVNNTVTGTET TVSEFNTIDGYQNTVTNGKHVTLIGSGNTATDSESTLVMGDKQKVTKVNHGVLLGSQDTE TETNVADVVAIGHNAHVQKAGGIALGSGSIASVDKDVSGYDPSTAVASTETSAIWKATQA ALSVGSTEDKNNLITRQITGVAAGTEDTDAVNVAQLKKVAAKIKDVADNAGSKVDIKGND TGITVTPKKDDTTGVTTYTVGLGNTIKAGKVTINGEASADNGKDGKSTITGLSNTTWDGT NIVSGRAATEDQLKAAVEKVVSGSAKQTTVTKGTNIVVTEGSNTAGGKDYTVALDKNLTG LESATFTKTVKKGDKEETTSTVINDLGTTVTDKDGNKTVTTAAGITITAGENTVSLKNDG LHNGDHKILGVADGRISAQSREAVNGGQVYRMMREAAAATDGKVGAAAAGSAALAALHPL NFDPDAKWNVAASYGTYGHYQAYALGAYYRPSESAMVSVGGTIGSGADAMNVGLSFKVGK GNLNHISTSRVAMAKEIQDLRAEVEALRQAVISLHEGHDVSPLASALFLDTPENHAAYQA VQALAAKGVLPAYAQGNKVKTRYEIATMLYAAVQQGKAIDGTLLRTFAPELERVHVAVIS RKENGEAAITRVRVGKL >gi|290781409|gb|ADGP01000019.1| GENE 5 10012 - 11001 965 329 aa, chain + ## HITS:1 COG:TM0515 KEGG:ns NR:ns ## COG: TM0515 COG1242 # Protein_GI_number: 15643281 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Thermotoga maritima # 4 307 2 302 303 266 45.0 4e-71 MNERYRVYSTYLKEKYGEKVYKLPISIPDTCPNRDGTLGYKGCVFCGSIGAGYENLPASV SVARQIAANIAHIQPKYKAKKFIAYFQNFTNTYLSPAAFRTFLQAACTDSIVGLAVATRP DCIHPAYLDILAEIQQQYGVDICLEFGLQTANYKTLERINRGHTVAEYIDALLMVRPYGF RVCTHVILDLPWDTEADTIETAKIISALPNQEIKLHALYIVKGTPMATWYKEGRIRLWPC EEYVRRAVSFLEYTRPDIVFQRLVGRVPKEAAETANWGMGWWKVRDMIDEALVQRHTWQG KLCTYLHGKAVRKWVATEEESSKKDGEPD >gi|290781409|gb|ADGP01000019.1| GENE 6 10985 - 11959 1284 324 aa, chain + ## HITS:1 COG:lin1504 KEGG:ns NR:ns ## COG: lin1504 COG1702 # Protein_GI_number: 16800572 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Listeria innocua # 13 312 17 315 319 302 50.0 5e-82 MENRINCAEVEELREILGRNDEFLRLLQHLLPACHMVVRGMDILLQGEAAETALAAETLA MLQYLYREHTYITGQHVRYIVSMLRRGAGAQLQALYSDTISISARGRRIKPKTLGQKAYA DAVRRHAVTFGIGPAGTGKTYLAVALGAFYLKNHEVERIVLTRPAVEAGEKLGFLPGDLQ EKIDPYLRPLYDALTDVFGAEQYRKLASRTIIEVAPLAYMRGRTLEHAFVILDEAQNTTR EQMKMFLTRMGNHSRFVINGDTSQIDLPDAGKSGLVEAERVLAQVAGIGMVHFSAADVVR HDMVSRIIRAYETFNENREEERRG >gi|290781409|gb|ADGP01000019.1| GENE 7 11956 - 12429 816 157 aa, chain + ## HITS:1 COG:FN0746 KEGG:ns NR:ns ## COG: FN0746 COG0319 # Protein_GI_number: 19704081 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Fusobacterium nucleatum # 40 153 50 161 162 118 58.0 4e-27 MNITITYEEASFQQDAYEKIITRVCSEAALVYGLGPKAEISILLCHNEYIHALNKQYRHI DRPTDVLSFALNEGEDDGYDGPDTALLGDIIISLEKVAEQAAEYGHSFERELAYLTIHGM LHILGYDHMEPEDKAEMRGEEEFILRRLGYVREGETL >gi|290781409|gb|ADGP01000019.1| GENE 8 12426 - 12818 508 130 aa, chain + ## HITS:1 COG:CAC1544 KEGG:ns NR:ns ## COG: CAC1544 COG0295 # Protein_GI_number: 15894822 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Clostridium acetobutylicum # 10 127 6 125 132 124 52.0 4e-29 MIDDVICRRLLAAARAVRVRSYAPYSRFSVGAAVLGTDGMVYTGCNVENASYGLTICAER NAMTHAVAAGCREFTAVAIVGNEEHYTPPCGACRQVLAEFNVPLVILGKNETAYTIVPLA ELLPFGFNLL >gi|290781409|gb|ADGP01000019.1| GENE 9 12834 - 13733 1029 299 aa, chain + ## HITS:1 COG:BS_bex KEGG:ns NR:ns ## COG: BS_bex COG1159 # Protein_GI_number: 16079583 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus subtilis # 1 299 1 299 301 332 51.0 4e-91 MEENQFLSGFVAVVGRPNVGKSTLINYIVRQKVSIVSDKAQTTRNRILCIYTDAAGQIVF LDTPGIHKPKHKLGEYMDAAAYQSLRDIDAVLFLVAGNEKKGPGDLFVAEKLNACKVPVF LLINKVDLLTKAEILQKITEYRSVYPFAGIIPVSARTGDNVATVMGELKKILPPGPQYFP EDMVTDQPERVLAAEIIREKLLLSLREEIPHAIAVYVDEMKKREKNKVYIRATVYVERNS QKRIVIGKNGSVLKEVGQAARQEIENLLGSSVFLDIWVKIKADWRNKASALREFGYHEE >gi|290781409|gb|ADGP01000019.1| GENE 10 13746 - 15101 1641 451 aa, chain + ## HITS:1 COG:CAC1422 KEGG:ns NR:ns ## COG: CAC1422 COG1253 # Protein_GI_number: 15894701 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Clostridium acetobutylicum # 19 424 16 423 428 262 35.0 1e-69 MEGQIVWPYVLGFLLCVSVSAWCVMGKFSFVQLRREYWEDAAREGDEKAARMMALYEKPE LFLGAAQFGMVGSILAAGALLVQVLRQMYGPLCAYGPSPAIGVFGVCAVLVVAVSFLWVF GELMPKSVGLERAAATLKMVSPFITGLQWLLYPLLYIGLAVSHGIFRRWHLRMTNETDMA HSEDEIRLLVTASHKEGKIDQVESELIDNVFDFADRLAKEIMVPRQDMVCLYTEDTMARH LEIIRQSRHTRYPLCAEDKDHILGLVHIKDVMEVYIHKRSNLRLIKRPILMIPEIMPVSK LLQLMRTRRTYLAIVVDEYGSTVGLIGLEDILEELVGNIRNEHTAEKEEIQPLADGAYEF DGTVLLEDVAELLHIPVEEDVDTDTIGGYVFNLLGHTPSVGDRVRIGEYRFSVSEVRRFR IARLQAVPDKKKEQEKRAEENESIQAVDTKK >gi|290781409|gb|ADGP01000019.1| GENE 11 15067 - 15783 747 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968424|ref|ZP_06559963.1| ## NR: gi|290968424|ref|ZP_06559963.1| putative DNA repair protein RecO [Megasphaera genomosp. type_1 str. 28L] putative DNA repair protein RecO [Megasphaera genomosp. type_1 str. 28L] # 1 238 1 238 238 454 100.0 1e-126 MKAYKRWTQKSENYEGIVINLRRTGQPQVVTIYTVEKGLVRVLYRRHKQTTAAITPLGKI SFSAAAQGDILLMGEFECRSNAAIRELTWERFIYSQIFLEMLSVLVPPTVADRAVYRLLL QYTAAFAYKDPRIVTIIAGWQLVGLAGFYPDTQRLRVTCTGRRENRGLYYVGETLSAEQA EVDVPESVRQMWQTLLTYRWGQRQIIHLQEKGLQFLEDLLYSYVEQWSEKKLKSPALR >gi|290781409|gb|ADGP01000019.1| GENE 12 15959 - 16270 391 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238926183|ref|ZP_04657943.1| ribosomal protein L21 [Selenomonas flueggei ATCC 43531] # 1 103 1 103 103 155 74 1e-36 MYAIIKTGGKQYRVQEGDNIFIEKVAGEVDSQVVFDQVLAVVKDGDVKIGTPVVEGAKVT AKVLKQGKEKKILVFKYKAKSNYRRRQGHRQPFTKVVIEKIEG >gi|290781409|gb|ADGP01000019.1| GENE 13 16270 - 16605 183 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238926182|ref|ZP_04657942.1| possible ribosomal protein [Selenomonas flueggei ATCC 43531] # 1 90 1 91 106 75 41 2e-12 MITIHVTADVNGNYTAFSIAGHAEYGEAGQDIVCAAVSALGQTALLGLLKYAAKQVTYTV KAGALSVSLQKTDERTQVIMDTMILGLREITTRYGDYVVLALETSGGGRNV >gi|290781409|gb|ADGP01000019.1| GENE 14 16598 - 16888 433 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372241|ref|ZP_03855723.1| LSU ribosomal protein L27P [Veillonella parvula DSM 2008] # 1 94 1 94 94 171 88 2e-41 MFNFDLQLFAHKKGTGSTRNGRDSESKRLGVKRHDGVIVKAGNILVRQRGTHFHPGTNVG IGKDDTLFAMVAGKVAFERAGRSNRKVSVYPLEAEA >gi|290781409|gb|ADGP01000019.1| GENE 15 16957 - 17355 663 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968428|ref|ZP_06559967.1| ## NR: gi|290968428|ref|ZP_06559967.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 132 1 132 132 217 100.0 2e-55 MRVYVNGEARELAVYDRLTGKEYAKLIVCAQERLETDEYGAFCMTEEEFSYWREIVTQQQ ESEDIIFLLATVVDKQEMDDYIFEETKYLTATKASVQMENLCVKDLKTAVETKDFSWLEE NGFRKTAEKLQA >gi|290781409|gb|ADGP01000019.1| GENE 16 17453 - 18406 1101 317 aa, chain - ## HITS:1 COG:lin1052 KEGG:ns NR:ns ## COG: lin1052 COG0598 # Protein_GI_number: 16800121 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Listeria innocua # 1 317 1 314 314 266 44.0 3e-71 MLQVYKHINGHLENNISLVAAEKGSWIHVVNPDSEDLQLVSMVTEIPTDVLKTALDTEER SHVELEDDYIFVVINIPILLEKDSYDTLPLGIFITEDFIITLCIEETDVMRAFTENKYPL FYTFKKTRFLFQILYRSATLFLRYLLQINRRTDDTESMLRHSMRNKDFFLLLELQKSLTY FTSALRSNGIVMERLMRLRRNAGLHHLLKMYEEDEDLLEDVIIENKQAIEMVEMYSNILM NMSDTFASIISNNLNIVMKFLASITIILAVPTIIFSFWGINVPLPFAHSPLGYLYVIGIA CVFAVLAFLMLWRKDLF >gi|290781409|gb|ADGP01000019.1| GENE 17 18602 - 19384 873 260 aa, chain + ## HITS:1 COG:all3753 KEGG:ns NR:ns ## COG: all3753 COG0300 # Protein_GI_number: 17231245 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Nostoc sp. PCC 7120 # 2 223 6 228 263 145 40.0 7e-35 MRHIALITGAYGGLGRCFAAIHARYGGDLVLVGRKEAVLASQCAALQKEYHIRAVYLVQD LARHEAADYIFSQCSTRYGDILYLINNAGFGGQGEFAARADIEDTQMMTVNMETPTRLCK LFLPGMIQRGKGNILNVSSIASRLPGPLQAVYFATKAYMTSFSNALWRETAHTGVGVTCL MPGILATGFTVRGHLERTALFAHGGAAPMEAAIAGYEGMRKGKRNVFCVHPKWLEYAIPY ASLAPEKWLLDYVYEQQRNR >gi|290781409|gb|ADGP01000019.1| GENE 18 19538 - 21025 1167 495 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1148 NR:ns ## KEGG: Vpar_1148 # Name: not_defined # Def: KWG repeat protein # Organism: V.parvula # Pathway: not_defined # 102 495 123 531 531 200 31.0 1e-49 MIRNYKKILLLMLLLYGGAALAGSGAAEPATIYTHRHRETAKVTVTESRTSTTARTETVR RGRHVQAGATWASELGAGVYVGRQPKQGLPLLPMQAPVKPADDRAYEAGALALVKEDGKW GILGKHGRFTTAPRYDRLQYQEDGVFVAGWEGKTWHITTYGKVVTAPEIRRMKENVHFYH AKKGYGLMAPSGQPITPPIFSEVLTPFQEGLGFVKTGKGKVVAVDATGKTVFVAPSSRVK PFVHGLAEFRRTQHRVNRGRLAGMILQNSFSAAGMTITAATPVTYQSEKRGYMDRSGKIV IDTNYDAVYPMTEWGTFISHQGKLRFVDRQGKILIPPGAYRLVPQQLDLVSGRAALEDKK TGRITVWSLATGKRLSADTYEAVFFLSPSLWAAKEGRSLVLIQASTGTPQAVLPDTIGIL PSGEEDYTWVYGTDHAYRIIERTGRTVYTAAPQTLQAVKPFRRGLSAVKKEGKWGVVDSR GRIVVPFLYEAIELV >gi|290781409|gb|ADGP01000019.1| GENE 19 21248 - 21844 707 198 aa, chain + ## HITS:1 COG:BS_yvaF KEGG:ns NR:ns ## COG: BS_yvaF COG1309 # Protein_GI_number: 16080411 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 5 188 1 184 190 65 25.0 9e-11 MKDVLRRRLLEATLRLVSEQGPAFRMDMLAARLHISKRTVYEQFSSKQELIWEAVFFFAR EMYEAHKQLAADSTLTTEEKILSFFRVSPQQEQLFSLRRIQDALMRAPLVREKLHELEAR NWDLLEQLLHAAQREGSLRDVDCTLCMHMIKAAAAESLAYMENAAHRCSFFEYMTQCLQV LLYGMKADGRNGIHETNV >gi|290781409|gb|ADGP01000019.1| GENE 20 21828 - 22964 1609 378 aa, chain + ## HITS:1 COG:NMA1970 KEGG:ns NR:ns ## COG: NMA1970 COG0845 # Protein_GI_number: 15794853 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 24 353 35 368 412 165 34.0 1e-40 MKRTYKAAMMSLVFVLAAVLAGCGAPPGLPKGPIRVNTYTVTAETVPLRAEYSGTVAAAA QVPIRSRISGRVLVKFVQGGQTVRAGQPLFRLDSREYDAALAAALAEQAQASAGLANQKL NYHRYRALAAQDAAAAQAVTDREAAVRQQEAVVQANAAQVQRARDNVKDTIIYAPFSGKL SVDDVPVGTYVTAGSTALVTISSTNPVFVEFSLSEQEYLQWMKEKNRTGTWGAAVQLRLS DGSIYPYTGHIAQMDPRLNEAGGAIVVKAVFDNPQQLLIPGLYGTILLTGQTAQPVLLVP QRAVQQMLGKYFLSVLNRQGQVQKKEVQVGPKTGKFWVITSGVKAGDVVIVDGYEKAEGA VLSPHVLTKADIERDTVS >gi|290781409|gb|ADGP01000019.1| GENE 21 22976 - 26110 3255 1044 aa, chain + ## HITS:1 COG:BMEI1629 KEGG:ns NR:ns ## COG: BMEI1629 COG0841 # Protein_GI_number: 17987912 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Brucella melitensis # 5 1032 4 1027 1051 766 40.0 0 MIAAFFIKRPVLAIVISLFITIMGVLALITLPVAKYPNVTPPQVHVTASYVGADAEGISA TVANTIERQLSGIDHLVSIESSSNDSGIYTLQALFDSGSNADMDAVNMQNRINQVIPLLP QEVAQAGVSVQKSTTSMAMVFALESPHGTYDQTFMKSYAAQYFLDAVKGVPGVGNVQEFG ADYAMRIWLNPMKMAICKVTPMDVAAALRSQNIQAPVGTVGAMPAPADQTYQYTLRANGR LQTADQFRQLIIRANPEGTAVRLGDVADVQLGARDYTVYSNLNGHPAVGFMVALTADANA MQTVGKVREVMEKAQEKFPDDLTYKVVYDSTKFVKASIEEVLKTLIEALLLVAFIVFLFL QSPRSTLIPLMAVPVSLLGTFACFKIMGFSINTLTLFAMVLAIGLLVDDAIVVIEAVEYE IKYNNRPPKEATLVAMKNVQNPVIGVACVLAAVFVPVAFIGGMSGVLYRQFALTIAVSVG ISAFVALTLTPALCTLLLREAPPDSTGKGIRGLFARFNYGFERLVDWYGGKLVHLKKHLA LCFFVPVLLIGLTGVFFRALPTGFVPPEDNGFVIMNLTLPEGMSQKETEKVSRRFSQWVR QQPGVSQMLNVIGFSVLAGGPKPNSATAFIGMDDWSKRPTLDLSSYMLAGKIMKHGMEVP EAMTIGMNPPPIDGMGTSSGFTVQLENRGGHTTEELWQTAQNFIKAAKKRPEIRMVFTAF AGDTPGYELTVDRERAAREGVNLKELYSTLQAFYGSYQVNDFSMFGRNFKVVLQAAPAYR SSIADNAHIGVRNNKGEIVPVNNFLKPKPVGAASVVTRFNNYPAIKVQGIPAKGYSSGDA LKALAAVAKETLGEGYAYEWSGMSREEVAAGHQTLYIFALAFLFVFLILAALYESWKVPF AVLLSVPTGLFGASFFAYVLHLQNNIYFQIGILAVIGLAAKNAVLIIEYAKVRVETRGMD SVSAVIEAAKIRIRPIIMTSSAFVFGSLPLIASSGAGASSRITMGITVVFGTTVATLFGV FLIPMLFLSVQRLSGTKLGLNKNK >gi|290781409|gb|ADGP01000019.1| GENE 22 26244 - 27581 1586 445 aa, chain + ## HITS:1 COG:lin0003 KEGG:ns NR:ns ## COG: lin0003 COG0534 # Protein_GI_number: 16799082 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 1 425 1 425 447 238 35.0 3e-62 MVRSMTSGNPIRLMLTFMIPLLIGNLFQQFYNIADVIIVGRTIGVEALAAVGATAPLFMA LLGATIGLSAGFTVVTGQRFGAGDWDGVRRSFAMSLLLSVAFNIVFSVVTAGCMPQIMRL MNISATLYDNAYHYILIIVYGLGAMMVYNLLSYICRALGDSKTPLYFLILASILNIILAL VFITVFGWGVPGSAIALIIAQSVAAITCWLYMRRQFPMLRLRRQDWRWNTAFAWQHLRLG LPMAVQFIIISLGILAIQSVCNTFGPETIAGFVSATRMEQLALQPMISFGIAMAVYTAQN YGAGKYDRIRQGVRQCSLLSLVFCAIAAGAMFALGKDLVSLFTTKQDPELLADAMLYIHT SVPCYIFLGQIFVFRNALQGMGISSVPLISSLLELVGRGGAAFGLAAVWGYFGICLSSPL CWLLACAFTGGCYYYVQREMKRAGR >gi|290781409|gb|ADGP01000019.1| GENE 23 27699 - 28697 1001 332 aa, chain + ## HITS:1 COG:no KEGG:Olsu_1160 NR:ns ## KEGG: Olsu_1160 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 2 332 4 365 365 218 34.0 3e-55 MIDKAILHVLDFHTGLCVVSEQELDLAQQEVYAYLEQRLQKLPADPTGRQGCFYKDSRLG AAAARYFQGALSFAEISGQIAHAVYDALASCEETATADVVVADFRDERQTRYLAILLLEA QIAYTHQISRVDGEMCTQLIRHRAILPNKLQKIRSYALIREDNLQLSLADKKRSCEGREI RILPERVLQCTVQLSSKETVRTVTKLIAAVAAEHGADSVEVSAKTKQYIAENAAQCDSFA PREAGAAVFADTPVLQEEFSRQCGERKLPDSVPVSSTWAQKVGNVHTIKTDTGIEITFPS AYIEHSEFIHFSTQEDGSLSIELKHIGAITNK >gi|290781409|gb|ADGP01000019.1| GENE 24 29100 - 30956 1807 618 aa, chain + ## HITS:1 COG:CAC3012 KEGG:ns NR:ns ## COG: CAC3012 COG0488 # Protein_GI_number: 15896264 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 616 6 627 632 472 40.0 1e-132 MEDVKKSYGTKVLFEDVHLAIGKRQKVGVIGLNGAGKTTLLQLAAGAETPDAGTVWRNPK ARIHYVPQTSAYIAGRTAVSAVLDGTLPIMQVLRQYEEAVQSGKEEDIIARAAEMDAWDA WDIEKRAKIVLQKLGLPQGNRRVETLSGGQRKRLALARALLMPCDLLIMDEPTNHLDEMT IAWLEEYIAQLKSAVLVSTHDRYFLDSIAQTMVEIDRGKVYSYTGNYAAYVAAHEARLEA EAANEAKRRNVLRREQAWIQRGVQARATKQKARQERYERLCAVEAGRPPSEIEMWDTSAR LGKTVIELSEVGFAYAGQAPLFSHVTYRFGRHDRIGIVGRNGAGKSTFLQVLAGTVTPTC GTVLRGQTVRIGFFTQHMPPIDGTQRVIEYVCEEASYVENRFGKKISASRLAEQFLFPED MQYTRIEKLSGGEKRRLYLLRLLMRRPNVLLLDEPTNDLDIPTLAVLEEYLDSYQGVVVT VSHDRYFLDRVADTLFVLQQGQWLPYKGDYSAYIMSARQQREGASAGQRVTVPPDKPAAA SRREKKGLSIRELAVYEEVLQEIPRYEALVKGLDAAILQAGDAYEKVNELLQERQRAQQQ LDALTEQWYRLEELKENT >gi|290781409|gb|ADGP01000019.1| GENE 25 31149 - 32612 1490 487 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 90 458 9 364 372 313 45.0 6e-85 MTEFQSRFQQLQRRVPIDEHNCSVQFDVTKCKNCTMCLRACCNTQTIMDYYYLPSTGDMP ICIHCGQCAAACPFGAITEVNDVGRVKAALQDPDKIVIFQTAPAVRVGLGEAFGMDPGTF VEGKMVASLRALGANYVFDTDFGADLTIMEEASELMHRVQSTTSPKPQLTSCCPGWVEFV EIYFPQLIPNLSTTKSPISILSPVIKTWFAETHKIDAKQIVNVCVTPCTAKKSEIMRPQL SSSGAYWKTDGMQDTDICITTRELAAWIKEENIDFDALEDSTFDKVFGESSGGGKIFGNS GGVMESALRSAYYFHTGEKAPAEFIPFEPVRGLNGVKEADVTIGEHTLKIAAISGLGNAR KFLDTHLADNTLTGYSFIEVMACPGGCIGGGGQPLVKMPQVKKVQQARIDSLYQSDSNTN VKASWENPEIKELYDDFLGNPLSERSEEFLHTTYEDQSELLGPMKHVTPQTNPMSKQYKP PATTEKK >gi|290781409|gb|ADGP01000019.1| GENE 26 32904 - 34262 409 452 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 4 403 42 435 477 162 30 1e-38 MAVNMDEYMARARAAQKEFATYTQEQVDAVVRVIGRVVYENAELLGPMAAEETGMGVAAD KIAKCRGKSGMIWNYLKDKKSVDIIDRDPERGLLYVAKPVGVVGAIQPCTNPVVTPMMNS MSALKGRNAVIISPHPASVKCSVKTVEMINEELDKIGAPKYLVQIIPEASIEASNDLMKA CDVVVATGGPGMVKAAYSSGKPSLGVGAGNTQVIIDRDVDITEAVPMIINGRKFDNGIIC SGEQCVFIPNDKYDAVINEFKLDGAYVISDAATRDKMRDVIFPGGKMNKDLVGKSPAVIA KAAGLTIPEDTKVFLIELEKHGKEEVLCDEKLCPVLVCLKYHTFDEAIDMAKDNYLYKGA GHTASVHSFNDKHIEAAGTKLPVSRVTVNQPCSSTAGGSYTNGLNPTTTLGCGSWGGNSM SENITYKHFINISRVAYVIKDAKIPTTEELWS >gi|290781409|gb|ADGP01000019.1| GENE 27 34335 - 35447 1181 370 aa, chain + ## HITS:1 COG:CAC1574 KEGG:ns NR:ns ## COG: CAC1574 COG1454 # Protein_GI_number: 15894852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 4 370 4 371 371 346 49.0 5e-95 MIELQLKPTLYTYESCREFVDDLHLGKGDLIVTNEYIYEPNFGNMDLDCAVIFQEKYGAG EPSDDMAEAMYRDMPKDVKRIIGIGGGTIMDLCKLFSLRKVSPILDLFDGITPLEKGKEL ILIPTTCGTGSEVTNVSVMALISRNTKKGIADDVLYADKAVLITQLLKTLPFKVFATSSI DALVHAVESALSPHSGPSFRLFSYHAIDLILRGYMKMREEGPEARIPIMKDFLLASNWAG IAFSIPGCAAVHAMSYPLGAKYHVPHGESNYAIFTGVMNCYMSIKSDGEIARLNHFIANI LGCSPADVYTELENLLNTILPKKALHEYGVKQEELAEFADSVMKNQGRLMAHNFVELDYD KVYSIYKSLY >gi|290781409|gb|ADGP01000019.1| GENE 28 35732 - 37351 1648 539 aa, chain + ## HITS:1 COG:YPO3943 KEGG:ns NR:ns ## COG: YPO3943 COG3275 # Protein_GI_number: 16124071 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Yersinia pestis # 4 533 8 559 565 189 26.0 1e-47 MLALFFEVIRNIAVIAVVIYIITQCKPFRRSMNQSHYSRRDKYALVVVFGMLSAVGNYLN VPFQQTAMVHARLIGTIIGGLFGGPLVGIGAAVIGMIPRFFIPVSSFPVITAALVANVLI GALSGYINQRYGARNISLWLGGGIALVSEAVLKSAVLWQAGPQQVFELEKYIALPAAIST CLGVILSIYIIRGVYADEDNNKANAAKKVIDIIFNTRGIFRKNGFTREAAQQIGKIIYNT LTVDYVAVSSPEGIWVEYTQGANKKDCKNTLQLPLRVSHREIAVIYISRPGLRKFHPYEE KWLLSLAELLSLELYQMALDRQTVLLSQAELNVLKSQIRPHFIFNMLSNIKAVITTEPEK AKDLICDLSSFLRGRLHRMEDTVSLAAELEAVDTYIRLEKMRYGERLRVVKTVEPETLTQ QVPYFILQILVENAIKHGIFKKKNGGTVSISAKRREDCLYLTVHDDGEGISPAVLARIRA FSQQQEMSDLTESTGIGLRNIYDRIQTLYGKRGIFSVQSTMERGTMIFISIPWGQERGL >gi|290781409|gb|ADGP01000019.1| GENE 29 37411 - 38163 891 250 aa, chain + ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 1 245 1 236 241 128 32.0 8e-30 MIQLMIVEDEKATAAELQGMVQELCTDTEVCSVCYDGETAVKEIQRLHPDVVLLDVELPG MRGIEVAQALMEMERAPLIIFVTAYMDFAVQAFAVNALDYILKPVDKKSLARVLLKVKKR MKELQAPLAKAAFSEHTVTLRKLTVNRGDRLEIIDCQDIRLIYGKNRQVFILTKKDEVCK VKITLQEFEERLSETAFFRCHRNYIVNVDEIKQITTWFKQRYLLILKGKKGMEIPVGRAY VGNLRAHVEF >gi|290781409|gb|ADGP01000019.1| GENE 30 38510 - 39808 756 432 aa, chain + ## HITS:1 COG:FN1715 KEGG:ns NR:ns ## COG: FN1715 COG1373 # Protein_GI_number: 19705036 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 425 1 423 430 334 48.0 2e-91 MEIKRDYYLDKLIRKKDNGFIKVITGIRRSGKSYLLNKIFYNYLIQRGIDKNHIIKFAFD SGRDLLKIGEDLIDLDVLSGDRLVEPKKFLDYIMKKTNDDDKFYILLDEVQLLKSFEQVL NGFLRQDNFDVYVTGSNSRFLSKDVITEFAGRGDEIYIMPLVFSEFLQTYDGDIEDAFAE YQVYGGLPAAALLKTDEDRMNYLKGQLENVYLRDIVHRHDIRLTSELEDLLNILASSISS FTNPSKIASTFRSIKKSKISANTIDKFIGYFEDSFILKKVHKYDVKGRKYIGTPYKIYFE DVGIRNARLNFRQIEPTHLMENIIYNELRYRGYMVDVGMVMKRENINNKDIKKQLEVDFI ANLGSKRYYIQSAYSLPSIEKINQENASLLNIDDSFKKIIIVKARIKPCLDEKGILTINL FDFLLDKDSLDL >gi|290781409|gb|ADGP01000019.1| GENE 31 39658 - 39942 126 94 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSGMASASVSSIRLPAKTTNPSSVCLQYASITLWDRVILREGIYYKSKLSLSNKKSNKL IVSIPFSSKHGFILAFTIIIFLNESSIFNKDAFS >gi|290781409|gb|ADGP01000019.1| GENE 32 39845 - 40129 102 94 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0084 NR:ns ## KEGG: HMPREF0868_0084 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 2 91 149 238 241 148 78.0 8e-35 MIEAYCKQTDEGFVVLAGSRIEETDAEAIPDTIKKWRARCRKNNEIKDGVLTKNYLFKSP SYAASFILGMTTNGKTEWKTADGVSLKTREESAL >gi|290781409|gb|ADGP01000019.1| GENE 33 40320 - 41894 1611 524 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0556 NR:ns ## KEGG: Vpar_0556 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 273 1 238 401 147 35.0 8e-34 MKKLQKISITLAVMSLIGFSGAYAENPFVDVPSDSWAYRSVADLANSGIIQGVNGKEFEG NRSITRYEAAEITAKALAQVTRANTSQRQVIYKLAREFATELQTLGVRVDQLESRVGTVT VSGDARLRWRHQKAMSGLYESLQWDYETKKLAMQEESHYEVDAGYGGDRAWDYQVNLRAD APVNERVSLHVGVTTDNQQFSSNETAQATKTFINRAYINYRPLKQVLLQVGRFDDYTLGK GYQYGDVLDGAIIRHETGQGGLTAGYGKLKSGDTTMARVYAFDEQGNQKMVECPGAKWYK IYGYTTAPLQVKTAFLSGDTALNENTRMGLYYSRFMVPAKYRSLPDGTEAHKTYQSAFRA TSLWGTYLDFLFPHEGRLLLNYEQVQQNDAAKVMADERGMKAKPAMWLGRFTLGNVQEKV GSWDMWVEYLHADKGAQVGGSSASWRKDVDNIKSVGLGMDYRLAKNVTLSVAQTISSSWI NRTPERVAPWKKNLGPYDNKSETLYRDKTSEPQEYTSVSLKVVF >gi|290781409|gb|ADGP01000019.1| GENE 34 41909 - 44242 1767 777 aa, chain + ## HITS:1 COG:STM2199 KEGG:ns NR:ns ## COG: STM2199 COG4771 # Protein_GI_number: 16765529 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 10 298 10 276 663 95 25.0 5e-19 MNRRAYMTVVAILFSSIGMGGMLDAASYTTGQVVVKAETAREMIQKRPKMVTVVGKKEIK EKKMQNLRDVLEAVPGMSFSIDPMNRTNYSLRGAESRHVPIMMDGMKISGELAKLSGAAN ELERFSTEDIERVEITHGISGARYGADAIGGVINIITKRPQKTGGYLEVEARQTAHDHQG EQTYHMGYNLVDTHKQVKLWGSWSKTAPHYNHAYWDYDFDLMDRNADPLRFKNMKILEQM ESAKTPKKASQISDNYFGKRSQWGATFYWQPQDSTEISYAYDKMIDDTQTRNFLGRINLG HLNIAMEWPFVNDKNKDLFWTTYLQGMNHIIRDNHMLSVRHFWDKGELRLRIKDSIYHKH FATLLRTVMYNLYKSDYMESNDRTYELTWEGYPNQQHGVTLTTQVKTNYGMGSRMIVPGH RVQDYEAWICSGDLFESNVEELTKEKNMGIKAIPMYRADMREWNVSLADDWQINKQWRIL PIIRYTHHTTGNQFSGEIGTVYAHKNTKIKFNIGTGFSTPGIMERYHAFLMMPLSVLWEK GPKTNYCVNPEDPEDKRVYYYPGWWWEGNPQLQPEKAFGMDLSLEKRYRKSNAKITAFYN NIRDYMNFFRTDRKLPPNHPANLQKNDSIYWIYSYNNLDRVTLSGVEAEYTQYINPYWTM TASATYLHAIESKTGKRLTMKPEMKYLFTLRYKKDKWSGSFWGEYSTKYIDIFDKKYIRV DIADGIPKNYGIWNMIIERQQNKNYSIYAGVNNIFNYDSPSLGIYGRVIRVGLSAKM >gi|290781409|gb|ADGP01000019.1| GENE 35 44577 - 44867 117 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968449|ref|ZP_06559988.1| ## NR: gi|290968449|ref|ZP_06559988.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 96 1 96 96 179 100.0 5e-44 MAKDIKALHMELRRTGPYSPWQNGNVERSHREDGKILYGRKVFTSEQELIRQVAKHEADI IKLRRPVLILKIPTKLCRNTSQRVIYVLIPKKFSHE >gi|290781409|gb|ADGP01000019.1| GENE 36 44998 - 45264 317 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121535267|ref|ZP_01667081.1| ribosomal protein S15 [Thermosinus carboxydivorans Nor1] # 1 88 1 88 88 126 70 5e-28 MLSVEEKKNIIAKFGANEADTGSPEVQIALLTNRILYLTEHLRMHKKDHASRRGLLKLVG QRRNLLAYLQKHNLERYRAILEKLNLRK >gi|290781409|gb|ADGP01000019.1| GENE 37 45414 - 47564 208 716 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|209559262|ref|YP_002285734.1| SSU ribosomal protein S1p [Streptococcus pyogenes NZ131] # 489 690 138 350 401 84 31 2e-15 MEEQKFQMEFAGRTLTVEVGKLAKQASGAALVRYGDTAVFVTATGAKEAREDADFFPLTV DYEEKMYSVGKIPGGFIKREGKPPESATLFARLIDRPIRPLFPKTYRHEVHVVAYDFCVD HDNAPEIAAMIGASVSLCMSHIPFAGPIAGVRVGRVDGQFVINPTVVQSEKSDMDFVVAG TKDAILMVEGGAEQVPEADILDAIMVAHEEIKKAVAFQESFLDAVSVPKQEFVEAEPPAD MVEAVHAYGEAAMKEAVFTADKMAREEKMNAVETDIYEHFSDIYPEDAAVVAAITQKMIK EIVRHMIAVDKIRPDGRKVDEVRPVSCEVGLFARTHGTGLFTRGQTQILSFATLAPLSEA QHIDGVGLETDRRYMHHYNFPSFSVGETRSSRGPGRREIGHGKLAERALVQVLPSEEEFP YAIRVVSEVLESNGSSSMGSVCGSTLALMDAGVPLQAPVAGVAMGLVTKGEDFTILTDIQ GMEDALGDMDFKVAGTTKGVTAIQMDIKIKGLRREILEQALQQAHEGRLHIMGKMLTAIS APRKTLSPFAPRIITMQIHPDKIRDVIGPGGKIIKQITEETGAKIDIDDTGLVYIASVDA AGGDQAKAWIERLTKDVEVGETYEGKVTRLMNFGAFVEVLPGKEGLVHISQLANERVEKV EDVVHVGDEIMVKCIEIDSQGRINLSRKVLLGGNTHAAHGTQTMNRGGNRHNGFRK >gi|290781409|gb|ADGP01000019.1| GENE 38 45414 - 47564 180 716 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|52080799|ref|YP_079590.1| 30S ribosomal protein S1 [Bacillus licheniformis ATCC 14580] # 617 715 270 369 382 73 39 4e-12 MEEQKFQMEFAGRTLTVEVGKLAKQASGAALVRYGDTAVFVTATGAKEAREDADFFPLTV DYEEKMYSVGKIPGGFIKREGKPPESATLFARLIDRPIRPLFPKTYRHEVHVVAYDFCVD HDNAPEIAAMIGASVSLCMSHIPFAGPIAGVRVGRVDGQFVINPTVVQSEKSDMDFVVAG TKDAILMVEGGAEQVPEADILDAIMVAHEEIKKAVAFQESFLDAVSVPKQEFVEAEPPAD MVEAVHAYGEAAMKEAVFTADKMAREEKMNAVETDIYEHFSDIYPEDAAVVAAITQKMIK EIVRHMIAVDKIRPDGRKVDEVRPVSCEVGLFARTHGTGLFTRGQTQILSFATLAPLSEA QHIDGVGLETDRRYMHHYNFPSFSVGETRSSRGPGRREIGHGKLAERALVQVLPSEEEFP YAIRVVSEVLESNGSSSMGSVCGSTLALMDAGVPLQAPVAGVAMGLVTKGEDFTILTDIQ GMEDALGDMDFKVAGTTKGVTAIQMDIKIKGLRREILEQALQQAHEGRLHIMGKMLTAIS APRKTLSPFAPRIITMQIHPDKIRDVIGPGGKIIKQITEETGAKIDIDDTGLVYIASVDA AGGDQAKAWIERLTKDVEVGETYEGKVTRLMNFGAFVEVLPGKEGLVHISQLANERVEKV EDVVHVGDEIMVKCIEIDSQGRINLSRKVLLGGNTHAAHGTQTMNRGGNRHNGFRK >gi|290781409|gb|ADGP01000019.1| GENE 39 47571 - 48017 564 148 aa, chain + ## HITS:1 COG:L181168 KEGG:ns NR:ns ## COG: L181168 COG0756 # Protein_GI_number: 15672158 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Lactococcus lactis # 3 146 4 149 150 142 52.0 2e-34 MSRGFEVVTAYQNQGIILPVRKTAGSAGYDLAAAATVTVQPKTITVVPTGLKAYMEQNEY LAIFIRSGLAFKYGLMLANGTGIIDSDYYNNSSNEGHIMIAYYNTQATPYTIEKGERVGQ GLFMKYLTVDGDAATAIRSGGIGSTGKL >gi|290781409|gb|ADGP01000019.1| GENE 40 48078 - 48626 652 182 aa, chain + ## HITS:1 COG:TM1181 KEGG:ns NR:ns ## COG: TM1181 COG0494 # Protein_GI_number: 15643937 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Thermotoga maritima # 6 174 5 170 179 130 42.0 1e-30 MSIAKESCIKRQEIFQGKILHVTVDTVHMEGVTQPAVREAVWHGGAACVLPVTADGKLIM VRQFRYAAGKALLEFPAGKLDHPGELPAECAFRELAEEGGVKAGELIDLGYIYTSPGFCN EILYLFLGRKLTPTSQHLDADEFLNIEQYTPPEVAQLIATGEIVDAKTIAIFAKAGSYLQ GV >gi|290781409|gb|ADGP01000019.1| GENE 41 48646 - 49827 1232 393 aa, chain + ## HITS:1 COG:lin2068 KEGG:ns NR:ns ## COG: lin2068 COG1015 # Protein_GI_number: 16801134 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Listeria innocua # 2 393 4 394 394 374 50.0 1e-103 MRFKRIIVIVMDSVGAGNSSDAAAFGDTGANTLGHIDAAMEGGLKIPNMRRMGMGNIADI HADHSIHVVGSYGRMQETAAGKDTTSGHWEFMGNPVATPFPTFPQSFPETLTRAFEEKTG YGYLGNEVASGTEIIERLGPDHFRTGKPIIYTSADSVFQIAAHNDVIPLQELYRICEITR HEVCVGPYEVGRIIARPFIGRQGAFIRTGDRRDYSRMPKRKMVFSYLKEAGYMVVGVGKI GDIYANLDLTESYHTADNREDMQVLTTQLQAHRAQQGLLMANFVDFDSQFGHRRNTPGYG QALEDFDRDLGPFMAQLQEDELLMITADHGNDPTWPGSDHTREQVPLLVYSPGLRQAVHL GVRETYADLGQTVMENFGLTGLEKGTSFLTQLK >gi|290781409|gb|ADGP01000019.1| GENE 42 49837 - 51150 1446 437 aa, chain + ## HITS:1 COG:CAC1546 KEGG:ns NR:ns ## COG: CAC1546 COG0213 # Protein_GI_number: 15894824 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Clostridium acetobutylicum # 5 402 5 403 433 396 53.0 1e-110 MWPQDCIIHKRDGGELSRKEIYRFITDYTSGNIPDYQAAAWLMAVYLQGMTPRETTDLAL AMAHSGRIADLSTVPGIKVDKHSTGGIADTTTLIVVPLVAAAGVPVAKMSGRGLGFTGGT LDKLEAIPGFSTQLTTNRFLQQIRQHGAAVMGQTTDLAPADKLLYALRDATGTVESLPLI AASIMSKKIAAGADAVVLDVKYGDGAFMKTPAQARQLAQQMVDIGALAGLPTCAVLTSME APLGMAIGNSLEIDEAVETLAGKGNSRLTAVVEEIGSRMLYMAHCTATVAAGREKLQAVW KSGAGLKKFKELIRTQGGETGWIGKHALTQAPFVYTAVSTEGGYITAIKAKTLGEIAMRM GAGRAQKEDVVQPMVGIRLFKELYDPVRPGEPLFTLYSMTEDKLPQLALQAAAAITVDAQ LPNNPASVIGGSIEATI >gi|290781409|gb|ADGP01000019.1| GENE 43 51187 - 52569 1181 460 aa, chain + ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 1 456 1 454 458 466 51.0 1e-131 MKEQRTIPVTKGKTYEIEIIRLGTNGEGVGKYQDFTVFIPYALPGERIVAVITTVKKTYA VGKLRQVLCASPARVAPTCAVYYRCGACQLQHFSYDGELQEKQRQVQDALTRIGHITNVP VLPTLGAATPWNYRNKMQFPVGEDKKNTLSIGCFAAATHNVINVENCVIQKEENNQIVRI VRQWMKDFKIPAYDEDKCTGMIRHIMGRVGVKTGEIMVCIVTACECIPHIKDLIRRLRQE IPGLTAVIQNINTGHTNVILGRKTRTLYGQDTIHDAIGNLRFHISAQSFFQVNSEQAQRL YEKAMEFADLKGNEIVADVYCGTGTITLFLAQKAKQVYGIEIVPSAIKDAIRNARDNHIK NAEFILGDAVYKLPELIKNGVRPQVIVLDPPRAGCGEPVLRAIGRSQPERVVYVSCNPAT LARDLACLQTYGYKTERVQPVDMFSRTHHVESVALVSRTD >gi|290781409|gb|ADGP01000019.1| GENE 44 52793 - 54271 651 492 aa, chain + ## HITS:1 COG:CAC0528 KEGG:ns NR:ns ## COG: CAC0528 COG0488 # Protein_GI_number: 15893818 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 492 1 492 492 493 51.0 1e-139 MSVIKIENLTFSYYGYVKPIFKNVSFSFDTNWKTGLIGRNGIGKSTLFKLLLNQETYQGK ISKDVEFIKFPPNISDTSKLGIELYKELISDEEEWKLFRELNLLNVDENLVYREFKTLSK GEQTKLLLAILFTQEDGFLLIDEPTNHLDMNGRKIVSEYLKSKKGFLLISHDRNFLDGCI NHVISINRNSIDVQSGNFTSWYENKLMKDQFEISQNERLRKDIKRLKEAARQSQIWSDKI ENTKNGVKVSGIKPDKGHIGHQSAKMMKKSKNLENRQNKAIEEKQSLLKDIETKESLLLH SLQHHKNPLISVSNLSSCYGERQILSNVSFEIKQGDIVAIYGGNGSGKSTLIKILLGINH EYTGEIKLAGNLKISYIPQDTSNLTGSLNEYIHKQDVDETLCKTILSKLDFSRELFEMDM KNYSDGQKKKVLIAISLSKPAHLFVWDEPLNYIDVISRIQIEETIKEVKPTLIFVEHDKR FVEDIANKIIQF >gi|290781409|gb|ADGP01000019.1| GENE 45 54375 - 54665 118 96 aa, chain + ## HITS:1 COG:SP1029 KEGG:ns NR:ns ## COG: SP1029 COG2265 # Protein_GI_number: 15900900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 96 448 543 543 97 53.0 6e-21 MSKLNTEHHLDIEIGEDELSEIDFSKDATYGEIKKYVLDKYGLKVSSLYIAQIKRKHGLI ERENYNFSKKENQRVPNCPEEKEKAIEDALEHFGMI >gi|290781409|gb|ADGP01000019.1| GENE 46 55178 - 55354 199 58 aa, chain + ## HITS:1 COG:no KEGG:Swol_2222 NR:ns ## KEGG: Swol_2222 # Name: not_defined # Def: transposase # Organism: S.wolfei # Pathway: not_defined # 1 52 1 52 270 63 71.0 2e-09 MCRLLGVTRSLVYYHLNKEKDVKLDEDEKLIEEIKEIFRRSRNNYGTRKIKKTRENWI >gi|290781409|gb|ADGP01000019.1| GENE 47 56369 - 56848 368 159 aa, chain + ## HITS:1 COG:AF0346 KEGG:ns NR:ns ## COG: AF0346 COG2608 # Protein_GI_number: 11497958 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Archaeoglobus fulgidus # 23 145 4 120 204 75 38.0 3e-14 MKINNECCCGCKTEKPDQIKDNCPVCNNEGISVSKVTVEHLVVDDYRNAVNGDQYKICMN EDCDVVYYNLDNEIKFLKDQVRVPIWFKKDADPKYACYCSEVTENQVIEAVVKHGAKSVK EVNAITGAMKNSNCKENNPLGVCCHKIIQEAIDKGLKMK >gi|290781409|gb|ADGP01000019.1| GENE 48 57578 - 57940 436 120 aa, chain + ## HITS:1 COG:FN0260 KEGG:ns NR:ns ## COG: FN0260 COG0640 # Protein_GI_number: 19703605 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 2 120 4 122 125 120 51.0 5e-28 MSKTSYICNCDVIHEDIVNDVKSKMQPKDDYIQLASLFKLFGDGTRVQILYALEQSEMCV CDLAVLLGVTKSAISHQLKALRLANLVKFRKEAQIVYYSLADDHVKEIIDKGFEHLWQKQ >gi|290781409|gb|ADGP01000019.1| GENE 49 57997 - 60351 958 784 aa, chain + ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 78 783 4 698 702 717 53.0 0 MKRIFLLKGLDCPNCSAKIEKEVGELDGVQSSVVNLMKQTLIINVAPAAADTIDSQIETI VHSHEPDVEVQEETVMNVTKSYSLKGLDCPNCSAKIEKEVGELDGVQSSVVNLMKQTLTI NVAPVAANTIASQIETIVHSHEPDVEVSEIAQEYYIPAKKQDTNTSYNNGDKKLTIRLAI GAAIYGIGMALTVFAKVPLPVELVFLIVSYIILGGDVVWQAVRNISKGRVFDEHFLMSVS TIGAFVIGEYPEAVAVMLFYQIGEFSQSLAVERSRKSISDLMDIRPDCATVRRNGELITI SPESVAIGEIIIVKPGEKIPLDGVVLDGDSMLDTRALTGESVPRSVHKGDEALSGCMNQT GVLTIKTTKAFGESTASKIIDLVENASGRKASTENFITTFARYYTPVVVILAAILAILPP ILLGGGWTEWIRRGFVFLVVSCPCALVISIPLTFFGGIGAASKRGVLVKGSNYLEALNNV SIIVFDKTGTLTKGVFNVTDILPANGFSKEQVLEYAVQAESFSNHPIAKSILSAYGKEID QSVISDYKEISGYGISAMAGKKKVYAGNTKLMDSEHVEYTACEKVGTKVYVAVDGQYAGC ILITDEVKPDSKKAISDLKHIGVEKTVILTGDDEKIGKAVAEELQLDEYYAQLFPNQKVE KVELLDSKKRQGSKLAFVGDGINDAPVLARADVGIAMGGLGSDAAIEAADVVLMTDEPSK LVDAIDVAKVTKQIVMQNIVIALGIKSVFLILGALGIAGMWEAVFGDVGVTIIAVLNAMR ILKK >gi|290781409|gb|ADGP01000019.1| GENE 50 60449 - 60886 374 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|253578327|ref|ZP_04855599.1| ## NR: gi|253578327|ref|ZP_04855599.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] # 1 145 28 172 172 246 95.0 4e-64 MIDAVTGVTPKAKKAAQAAAQLEGSYVLGINMMSDGLDNENTRNKLKELALDDSKTNETD LMKTDISFRLYVSETDYPLVSYAKKLCDRLKQAGFLVDLKEYSNTMMLSRVVSGKYDVFL VSDDFIDVTTLTRMDYMIMDSEEMR >gi|290781409|gb|ADGP01000019.1| GENE 51 60897 - 61436 213 179 aa, chain + ## HITS:1 COG:no KEGG:CKR_0690 NR:ns ## KEGG: CKR_0690 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 26 179 1 150 150 149 57.0 3e-35 MRKWNTILSVLMLLIFMIHGIMGSFMLNGVGSSAGKLLAWIGVGILVVHTVIGVILTVQS LQTAKQSGKMYLKQNVIFWARRASGMAILILLLFHIGLFGKVQNGTYILFPFTTVKMVTQ LLFVAAIFVHIFINIRPLLVSLGSISYKERRSDIYLILSVLLLFIAGAVILYYIGWQYL >gi|290781409|gb|ADGP01000019.1| GENE 52 61433 - 62977 941 514 aa, chain + ## HITS:1 COG:BH3092 KEGG:ns NR:ns ## COG: BH3092 COG1053 # Protein_GI_number: 15615654 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Bacillus halodurans # 1 507 1 562 589 365 38.0 1e-100 MSKTIIIIGAGLAGLSATLQAAENGCNVKLVSSLPSERAQSVMAEGGINAALNTKDENDS PEEHFTDTIKAACGLADPNAVWGMTQAAPELVHWLLKLGVKFNMSGYNDVDLRNFGGQKK KRTAFAQSDTGKQIMTAMIDAVRRKEASGMVERFSHHSFLTLRLCGNICCGCVIRDEYSQ ETVELPGDAVVVATGGMHGLFGNTTGSLSNTGEVTAELFRLGVPLANGEMIQYHPTTVKC GGKRMLISEAARGEGGRLFAMKDGKQWYFMEEKYPELGNLMPRDITAREIWKVSHESEVF LDMTEISEEIISNKLSGLEDDCMTYLHKDIRKEPVSVLPGIHYFMGGILVDEQHRTPIQN LCAAGECCAQYHGANRLGGNSLLGALYGGRVAAKSACEQADVVDLSCATQIDFPPASQIS EIKQLNKVMQETMGVVRNENTLLNGIQTVQALTGNLPLLGMAVLKSALARKESRGAHWRE DHPKSNDDDYLKTTVAGFDGKQIQISFVPVPERR >gi|290781409|gb|ADGP01000019.1| GENE 53 63169 - 63684 45 171 aa, chain + ## HITS:1 COG:SA0996 KEGG:ns NR:ns ## COG: SA0996 COG0479 # Protein_GI_number: 15926733 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Staphylococcus aureus N315 # 5 156 85 244 271 109 35.0 2e-24 MVRKCGACAMLINERPRLACSTFLHTLKGSTIILEPLSKFPLVRDLIVDRSNLFENLKKL NLWLESEAYMSSWTHEPRYRSARCLMCGCCLEVCPNFSANGTFAGTVAAVNAFRILNEAQ ESTHLNEISAEYKKRFFEGCGKSLSCHDICPIGLPVEELLVRSNAAAVWGK >gi|290781409|gb|ADGP01000019.1| GENE 54 64159 - 64857 451 232 aa, chain + ## HITS:1 COG:FN1715 KEGG:ns NR:ns ## COG: FN1715 COG1373 # Protein_GI_number: 19705036 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 228 200 426 430 250 57.0 1e-66 MKNVFTSTYINDVMERNKVLKDASIMDDLLDIISSSIGSLSNPTKLANTFMSEKNIKISQ LTVSNYLDYFIDAFLIEKAGRYDVKGREYISSPYKYYFSDIGLRNVRLNFRQNEQSHIME NVIYNELRMRGLNVDVGVVEYNYKDENKKTIRKNLEIDFIINRGSNRYYIQSALNVDTKE KQVQETESLRRIGDSFKKVVIVRNNIVPGFDDDGILYIGVEDFLLDETAPDL >gi|290781409|gb|ADGP01000019.1| GENE 55 64898 - 65788 640 296 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0084 NR:ns ## KEGG: HMPREF0868_0084 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 56 296 1 241 241 389 79.0 1e-106 MNNGKAFNLFLLDGEVTGRMKCTLPSWSGLAYKIPRTYLDACKDRVHLKQSGVYFLFGKN DEEEDTVYIGQAGSRKNGEGVLFRVVEHLKDEFYFTEAVMFTTSDNSWGPTEISYLENKF TNLAIRTGRYTVKNGNEPNPGNVTEEKEAELEVYIEQFKLMLGILGYKIFVPLVKTPEPV EEDREDRELMLTLTRKITRSHKVIEAYCKQTDEGFVVLAGSQIEETDAEAIPDTIKKLRA RCRKNNEIKDGVLTKNYLFKSPSYAASFVLGMTTNGKTAWKTADGVSLKTREKRTL >gi|290781409|gb|ADGP01000019.1| GENE 56 66271 - 66486 246 71 aa, chain + ## HITS:1 COG:no KEGG:CD1864 NR:ns ## KEGG: CD1864 # Name: not_defined # Def: putative conjugative transposon regulatory protein # Organism: C.difficile # Pathway: not_defined # 1 70 1 70 76 91 75.0 9e-18 MSKLSYKKLFKKLIDIEMKNTELMEKAKVSKSTFYKIKNGENVTTDVLLRICDVLECDIS EIVECVEIEDK >gi|290781409|gb|ADGP01000019.1| GENE 57 66526 - 68625 1486 699 aa, chain + ## HITS:1 COG:HP0051 KEGG:ns NR:ns ## COG: HP0051 COG0270 # Protein_GI_number: 15644682 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Helicobacter pylori 26695 # 336 688 1 353 355 392 55.0 1e-108 MGNLILNKARYSSNNTDEWYTDYKTIENEVNHYESQFNGKKVLCNCDDPYESAFAKYFLK NFNRFKLKKLVCISYAKSAMHSSEDGRGLLLEVDKMPYFIEGDLNNDKIFEALNSNGNIK KLIGDGDFRSQECINYLIDSDIVVTNPPFSKFTELFSLIIKYDKQYLLISNQNAITYKEI FPYIKNNKARVGYHFGDMAFRVPDDTEPRKTRFWVDEFGQKWRSLGNAMWLTNLEVSNDS GKKLVLTHSFKEENYPKYDNFDAVHVYRVSEIPMDYYGIMGVPLTYLKYHNDKMFEIVGE ANHGSDNEYDLFKPQINGKETFKRILIKRRKRDKRMEFRILDLFCGAGGMSYGMHKNSHF VTKVALDINEKLAQTFKENIPESELIIGDIQDKAIKEKIINLSKKNKVNMIIGGPPCQGF SLKGKKLGLDDPRNFLFIEYLHLVQELKPLVFVIENVKSLMSTSNGWFKNQIISEIKKLG YEVSVGIVRASDYGVPQNRERVIFLCSKNKAISLPEPTVKKTTTVRDAIEDLAYLNSNEG DFEQSYITEAKTEYQKLMRKDSDRLYNHKASNHSEIAIHKLSMIPPEKGKEYLPENLLGK QKFNSTWGRLKWDEPSPTIDTRFDAASNGTNNHPFLNRSITLREAARIQSFDDRFIFYGN KVDIRTQIGNAVPPLMAKAIADHIYENLVNNESEVIENE >gi|290781409|gb|ADGP01000019.1| GENE 58 68618 - 69490 457 290 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968469|ref|ZP_06560008.1| ## NR: gi|290968469|ref|ZP_06560008.1| hypothetical protein HMPREF0889_1601 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1601 [Megasphaera genomosp. type_1 str. 28L] # 1 290 1 290 290 591 100.0 1e-167 MNNQMAYLVGMILGNGEVQRDVNSTTITIEIPHKNLRDDEGLEVSVYVKSSLADIRSVIE PLLGHSLPISQTKSVTRVSFTKPNEDYTMREILRFIGNGIHHSTMTMNDELFNMSTDEKK ELLRGVADVTGYIRKSNIAFGQDGCHRVYIEIPGNWQFVIDIANMLKTLDIPVQTIDFGH PNFRDSNLKKYNEGKPNYWKKEHQVKIWANEFLPIGFNIVHKQRALERYAEELLDYLDEE KTHQFYWEKPVRLRNKSIHPMENDDSLPEKIRGKHFDSWTQLAKELGYGE >gi|290781409|gb|ADGP01000019.1| GENE 59 69480 - 69983 264 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|153814226|ref|ZP_01966894.1| ## NR: gi|153814226|ref|ZP_01966894.1| hypothetical protein RUMTOR_00435 [Ruminococcus torques ATCC 27756] hypothetical protein BACPEC_02202 [Bacteroides pectinophilus ATCC 43243] hypothetical protein RUMTOR_00435 [Ruminococcus torques ATCC 27756] hypothetical protein BACPEC_02202 [Bacteroides pectinophilus ATCC 43243] # 1 167 1 165 165 202 57.0 8e-51 MANNVRSEFDLYPGMCRWLDTYLKDKFKNKRCEVVVLDCHSVYLDSILDKYDVIQYYPQV VGLKIEIDVLGIVRWKDRAEIYLVEAKKTALNLQNLGQLLIYCKLCNPEEAYLLSSGGLG SLKKVLNNLNREDLLDYGSGKRIKKIKVARWDIAKDGIDNHSIVPKI >gi|290781409|gb|ADGP01000019.1| GENE 60 70020 - 72608 934 862 aa, chain + ## HITS:1 COG:no KEGG:Desac_0721 NR:ns ## KEGG: Desac_0721 # Name: not_defined # Def: hypothetical protein # Organism: D.acetoxidans_DSM11109 # Pathway: not_defined # 2 860 11 883 884 640 42.0 0 MFDNGCEWIRCDFHLHTRKDKEFKYTGEDNSFVSDYVNKLESEKIKIGVITNHNKFDLQE YKALKKTAKKKDIFILPGVELSVKDGKNGVHTLIVFNPEDWIKNGENHIDSFLTAAFQGI SNRENENTCCNFDINTLLVELEKLNKDYFIVFAHIEQRSGLIEECGGGRLSSLAQNHEFK KRVLGLQKLRTFDNKSKIKNWFGYEIAFVEGSDPKKLDEIGKGELCYVKIGEYSFSALKF SLQDYENRISNEEPKINHGYIQSIAFKGGKLDSIKIPFSNELNTLIGIRGSGKSSILESI RYALDLNANIDKDYKENLVKNTLGSGGEISLDIIDKYGKHYEVRRLMGEQPSILDENGDE VGISINSVINNPLYFGQKDLSFTQSGYAFDLLQKLVGNKIKMQLGSVDNYVLKLDNSIRN LLQLSSIPTKIEELNAAKQDLEYKLKIFHEKGIAEKLNKQTSYNKDYNKIEYLVKQVNVT YSKVKKVYGEIDKNQFILSDYTSEFNGELFGNINDILKNILTAINNISAEIETIAKNENS LRTIKDEFDKDMKSLKEEFASIKREIQDDTLDPDSFVKYTSELDKVKQNIEELNKKNNSR ESLILDIKKSIRERNEVLSNIFNKYEEEIKRINDSQSELKIKIKFKGNKDKFKNDIKAKF RGTGISEVKATTIANEFSDFVSIISDCILDDAKKLHSILTDKEVVKVYDKIKDNYSHLIK EVCPDLVEIYYHDKLLEQHSIGQRASALILFVLTQEDNDLIIIDQPEDDLDNQIIYDEVI STINKKKKSIQFIFATHNANIPVLGDAECVISTQYDEKINADIGNIDCKNTHKKIVDIME GGKEAFEKRKLIYTNWNEASKV >gi|290781409|gb|ADGP01000019.1| GENE 61 72611 - 73591 338 326 aa, chain - ## HITS:1 COG:no KEGG:SZO_12770 NR:ns ## KEGG: SZO_12770 # Name: not_defined # Def: relaxase/mobilisation protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 326 118 443 443 426 76.0 1e-118 MVTGKCYQSNKRSYHQIRYQSDKLCKENNLSVIDEFYETYRKKYKTNGKSWYENDKFKKG TSWKSRLQFDIDKAIKQSKDWDDFIKRMATLNYEIKYGKHIAFKHKDKERFTRAKTIGDD YTEESLKERIAEISSIKTFAVKKCIGNIIYMNTNVKVKESKSHEYWATKHNLKTATDTVL LMREKGFKSISQLDEFIKESADKRQNLQDKIKVIDKKISVLSNTMEQVHTVKMYRQIYLE YKKDPSDKAFFEEHKSEITLYENSLSDLKKSYSKLPNSKDILKELDSLHEKKNTLMQEYS SAKSDMKELYQIRKNYEKYMGKEMER >gi|290781409|gb|ADGP01000019.1| GENE 62 74082 - 74303 99 73 aa, chain - ## HITS:1 COG:no KEGG:HS_0428 NR:ns ## KEGG: HS_0428 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 1 69 1 69 113 97 73.0 1e-19 MANRFRNERIEIKLTKEEKALFEEKMKMAKCKTMNHFLRKVVSESNIYVVDLQPFREIQG SLFRYANSVKPNC >gi|290781409|gb|ADGP01000019.1| GENE 63 74688 - 75260 426 190 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 190 1 189 189 163 50.0 2e-40 MAQVLKEEVRNRILEAAEKVFYKKDYRGAKLTEIAKEADIPVALIYTYFKNKEVLFDAVV SSVYINFESAFNEEESLEKGSAFERFDEVGENYIHELLKERKKLIILMDKSSGTKHAEAK QKLISQMQVHIEVSLKRQSKQEYDPMLAHILASNFTEGLLEIARHYQSEKWAKDMLKLIA RCYYKGVESL >gi|290781409|gb|ADGP01000019.1| GENE 64 75364 - 77103 184 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 346 549 40 249 329 75 26 1e-12 MAEKELRKKVIGKNGLSNSLLALKIVFDLIPQILLVYLISSLITNNINEGNLKYIFGGIF ISFVLKGVFYYFATKVAHEKAYEKLTELRLDIIDHLKKLSLGFFKEHNTGELTNIVQHDV EQVEVYLAHGLPEIMSVTLLPAIIFVAMIFVDWRLALGMIAGVPLMYLVKILSQKTMDKN FAIYFNHENKMREELMEYVKNISVIKAFAKEEEISERTLKTAREYIYWVKKSMGMVTIPM GLIDIFMEIGVVIVMILGSIFLYYGNITTPNFILAIILSSAFTASISKTATLQHFSIVFK EALKAIGKVSTVPLPNKKTEQGLEFGNIEFKDVNFAYGKDSFELKNINLTFKKNSLNAFV GASGCGKSTVSNLLMGFWDADEGQILINGKDIKEYSQENISMLIGSVQQEVILFDLSIFE NIAIGKLNATKEEVIEAAKKARCHDFISALPNGYETRVGEMGVKLSGGEKQRISIARMIL KNAPILILDEAMAAVDSENERLIGEAIDDLSKDKTIITIAHHLNTIRDSDQIIVMDKGVV LDAGSHEELMKRCEFYKDMVEAQNKVDRWNLKEVVTENV >gi|290781409|gb|ADGP01000019.1| GENE 65 77312 - 78811 197 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 275 473 38 242 329 80 30 4e-14 MVADMKKHSAGFDIVQQIRERMIIKLKKFSLGFYTNERLGEINTILHKDVDNMSLVVGHM WSRMFGDFLIGAVVFIGLASIDFKLAILMAVSVPIALIFLYLTIKQSERIENQNNSALLD MVSLFVEYVRGIPVLKSFSNNKSLDNELMNKTKKFGETSKAASRFKAKQLSIFGFLLDIG YLVLLIAGTIFVVKGNLDVLHFIIFAVISKEFYKPFASMEQHYMYYVSAVDSYERLSRIL YADVIPDKVNGIVPQDNDIAFENIDFSYKKDEFKMENLSFSIAEKTMTALVGESGSGKTT ITNLLLRFYDVHKGKITLGGTDIRDIPYDELLDRISIVMQNVQLFDNTIEENIKVGKKGA TKEEIIEAAKKARIHDFIMSLPKGYETDIGENGGILSGGQRQRISIARAFLKDAPILILD EMTSNVDPVNESLIQDAITELAKNRTVLVVAHHLKTIQKADQILVFQKGNLLEKGKHGEL LEQDGYYTKLWKAQYEVSS >gi|290781409|gb|ADGP01000019.1| GENE 66 79084 - 80358 450 424 aa, chain + ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 24 422 22 408 411 73 24.0 8e-13 MMKEYLPRIADKLLEERLDAKGAVLIEGPKWCGKTTTAKQKVKSFISMDRPDMTRQYQQM AEISPNTLLKGETPRLIDEWQISPNLWNAVRYEVDNRDEFGQFILTGSAVPNGFDDSMHT GTGRISKLLMRTMSLFESKDSSGEVSIKDLFKGENISVINETSLEKIAFFICRGGWPKAI GLDEKPALFQAIDYFDAIVSTDISRVDSIKRDKERTKRLLKSYARHVGTQSSLETIRQDM LANQSDTFDQGTLYSYLDALRKIFVIEDSAAWNPNLRSKTSIRTTETRYFSDPSIATASL GMGPNDLLNDLNTMGFLFENLCVRDLRIYTDYLDGTVYHYRDKSGLECDAVIHLRNGAYG LIEIKLGGDKLIEEGAKTLKDLASKIDTKNMFKPSFMMVLCAKAPFAYKRNDDVYVIPIT ALRP >gi|290781409|gb|ADGP01000019.1| GENE 67 80402 - 80605 192 67 aa, chain + ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 1 63 290 352 458 87 63.0 6e-18 MNQEQAEKLYNIALSYADLKGNETVIDAYCGTGTISLYLAQKAKHVIGIEIIPAAIENAE KNAEKIT >gi|290781409|gb|ADGP01000019.1| GENE 68 81238 - 82083 767 281 aa, chain + ## HITS:1 COG:VCA0070 KEGG:ns NR:ns ## COG: VCA0070 COG0226 # Protein_GI_number: 15600841 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Vibrio cholerae # 42 281 51 299 299 161 39.0 1e-39 MKIKKMLSIVAVGVLCLGVLTACGGKASQKNAISHEKAGSASVSMDGSTSMEKVIGILGE SFQKDTGITFTYNPTGSGSGIKAVSEGRCDIGLASRNLKDEEKASGLTETVIAHDGIAMI VNPDNPIRNLSITDIVGIYTGKITNWSQVGGKDEQIVVIGREAGSGTRDGFESITKTKNV CKYRQELTSTGDVITTVAQNPNAIGYASAASIKNSVKALTVDGVAVNEENIQNGKYTIQR PFVLVTKKAVKLSDAAKKFFDYATSRTSHDLISKAGVVPAN >gi|290781409|gb|ADGP01000019.1| GENE 69 82148 - 83014 486 288 aa, chain + ## HITS:1 COG:VCA0071 KEGG:ns NR:ns ## COG: VCA0071 COG0573 # Protein_GI_number: 15600842 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Vibrio cholerae # 8 279 50 318 327 209 44.0 5e-54 MKKKQMIENVIHGLFFMLGLITVGGVLLITVYLVISGIPAIHKIGLIPFLFGTEWAPTKA NPQYGILPFILTGIYGTAGAVLLGVPVGFFTAVYLSKVANPKIKELIQSFISLLAGIPSV VYGLVGMLILVAGIQRLFYVSDGASLLAAMLVLAIMILPSVIKMSVTAMDAVPKEYEDAS LALGATRIETYFRVSVPAAKSGIAAAIVLGIGRAIGEAMAVMMVAGNAANMPNSLFQSVR FLTGAVAGEMSYAGGLQREALFSVALVLFLFIMLLNATLNFFLKRGTK >gi|290781409|gb|ADGP01000019.1| GENE 70 83018 - 83878 361 286 aa, chain + ## HITS:1 COG:VCA0072 KEGG:ns NR:ns ## COG: VCA0072 COG0581 # Protein_GI_number: 15600843 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Vibrio cholerae # 7 279 5 284 289 176 37.0 4e-44 MNTEYHKVRRKQYEVFMKGLMYICTGLTAAISLFLLVYVLIKGVPGINRSFLSTAPSYLS DRIGILPDILNTLYIMIAALLIVLPLGVGAAIYLTEYATNQKIVSIMEYTAETLSGIPSI IYGLVGMLIFANHMGTSLLAGALTLAIMNLPIIMRNTQESLKSVPISYREGAFGLGAGKW RVVRTVVIPGCVDGVITGCILSVGRILGESAALLFTAGFAHALHGFADGLASPGATLSVS LYVYAKEDGEFDIAFAIAAILMLLVLMINFAAEMTQKYYAKRRKER >gi|290781409|gb|ADGP01000019.1| GENE 71 83879 - 84655 214 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 233 1 216 311 87 29 5e-16 MKKGNKPMGSLITVKDLCLRYGEHQALKKINIEIPEKSITALIGPSGCGKSTFLKTLNRM NDLIPSVKITGEIYYREGNIFAHHVDVNELRKQIGMVFQKPNPFPMSIYDNVAYGPRTHG ITNRELLDEVVEKALRGAAIWDEVKERLKKNALGLSGGQQQRLCIARALAVEPDVLLMDE PTSALDPISTSKIEELVMELKKDYTIVMVTHNMQQAVRISDYTAFFLLGELVEFGATDNI FDRPQDKRTEDYITGRFG >gi|290781409|gb|ADGP01000019.1| GENE 72 84655 - 85326 533 223 aa, chain + ## HITS:1 COG:aq_906 KEGG:ns NR:ns ## COG: aq_906 COG0704 # Protein_GI_number: 15606237 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Aquifex aeolicus # 7 216 5 215 221 115 35.0 7e-26 MRNQFDKQPDELNLQLIRMGAICEETIAGVTKSLFEGNVMLAREKKQSAGEIDRLERDIE QLCMKLLLHQQPVAGDLRQISAALRMITDMERIGDQAEDIAELVILLNGSQIKGAELIND MAPAVVKMVTDSVEAFVRKDIALAENVILEYDIINNFFDRMKNTVVELIIKQYADAESAP DFLMIAKYPERIGDHAVNIAEWIIYAMTGKHKEREHDMVCRRR >gi|290781409|gb|ADGP01000019.1| GENE 73 85301 - 85981 553 226 aa, chain + ## HITS:1 COG:CAC1700 KEGG:ns NR:ns ## COG: CAC1700 COG0745 # Protein_GI_number: 15894977 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 220 6 227 232 184 43.0 9e-47 MIWCVEDDENIREIEIYTLNSTGFEAIGFADGVQFWKAIQKEKPELVILDVMLPGMDGVE LLGKMRHSVELENIPVIMATARGAEHEKIQALDLGADDYIVKPFGVMELVSRVKAVLRRC RQGRVFELLQVGSLILNLDERTLTIEGERIMLTFKEFELLHLFLSHPGSAFTREQLYDLV WNIDYMGDSRTLDMHIKTLRQKLGRYGKCIETVRHIGYRWETGYEQ >gi|290781409|gb|ADGP01000019.1| GENE 74 85971 - 87635 965 554 aa, chain + ## HITS:1 COG:CAC1701 KEGG:ns NR:ns ## COG: CAC1701 COG0642 # Protein_GI_number: 15894978 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 55 551 56 566 566 247 33.0 4e-65 MSSKIFKAILLIAFSTLLGTLLIITVCMFDYFGTVQKNQLVGELSIAARGTEVAGKDFLN QLDLKNYRITWVAKDGTVLFDNEINPANMENHADREEIKEAFEHGTGSSSRYSKTLTKKT VYEAVRLTDGTVLRISASRITVFVLLLSMIQPILIVSIFVVILSAVLGKRMAKRIVEPLN RLDLDNPLENDTYEELSPLLRCIQGQQREIQRTLACLKQKRDEFNQITGNMRESLILLDN AGAIITINLSAKKLFRVTDICIGRNIIEVDRHQNIRDFMQKSMENGHAEFRENRNGREYQ FDLSRIVSDDAVVGTVILAFDITEQAEAERGRREFTANVSHELKTPLQGIIGYTDLMESG LAKSEDIPRFVGYIKKEASRLVTLIEDIIRLSQLDEGTDMPVAEVSLGHLADEVCKTLFD AAKSKNISLSWSGADGNMYGVKRLLYEIVYNLCDNAITYNRSGGSVKITVSEDDKNVRLE VADTGIGIPAEHQERVFERFYRVDKSHSKQSGGTGLGLSIVKHAVAYHHGKIALESEPNK GTVITVAFPKKSLV >gi|290781409|gb|ADGP01000019.1| GENE 75 87816 - 88097 322 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968485|ref|ZP_06560024.1| ## NR: gi|290968485|ref|ZP_06560024.1| hypothetical protein HMPREF0889_1617 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1617 [Megasphaera genomosp. type_1 str. 28L] # 33 93 1 61 61 75 98.0 2e-12 MRGRVHYIPHYKQQASVHFLTCTKIGINGTLCVGIVREIQALKEKYAAKDRIMQALLQVQ QQKEAEIQALKEKDGQREEQIRHLTAMVMRLQK >gi|290781409|gb|ADGP01000019.1| GENE 76 88505 - 89899 1739 464 aa, chain - ## HITS:1 COG:VC2278 KEGG:ns NR:ns ## COG: VC2278 COG2252 # Protein_GI_number: 15642276 # Func_class: R General function prediction only # Function: Permeases # Organism: Vibrio cholerae # 8 463 2 428 430 350 49.0 4e-96 MTNNSGFLDRLFHLHENGTNVKTELLAGITTFMTMAYILAVNPTIMSITGMDKGAVLTAT VLASLVGTLCMAVFANYPFALAPGMGLNAFFAYTVVLQMGYTWEMALAAVFVEGVIFIVL SLTNVREAIFNAIPLTLKKAVSAGIGLFIALIGLLNAQIIVANPATKISLFSFKHSLVSG SFHTVGITVLIAMIGILFTAILIVRKVRGNILWGILFTWILAVICELIGWYVPNPELHMY SVIPNLSAGIASFTPVSLTPLLGKLDFTRFFSLDFAVVVFAFLFVDIFDTLGTLIGVSSK ADMLDKDGKLPRIKGALMSDAVATSIGALLGTSTTTTYVESATGVSEGGRTGLTAVFVAI FFALSLFLAPIFMAIPAFATAPALVIVGFLMLTSVTGIDFNDFSESIPAYITIISMPFCY SISEGISFGIISYVIINLATGHYKKISPLMYILAIIFAFKYVVL >gi|290781409|gb|ADGP01000019.1| GENE 77 90128 - 91018 1199 296 aa, chain + ## HITS:1 COG:CAC1716 KEGG:ns NR:ns ## COG: CAC1716 COG1561 # Protein_GI_number: 15894993 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Clostridium acetobutylicum # 1 296 2 292 292 179 35.0 7e-45 MRSMTGYGRGEAVGATGTVTVEIRTVNQRFLELNLRLPRTYMYLEDMVRNHITACIARGR VEVFADFPEAAGTVPHICVHKELVQAYRQGLLAAQQEGFDEAPLTLSELLQVSTDWLTVE SKEDMAAIRAVEPVLLQALQAALQALVKTRESEGARLAADIQRRVRTLQGLIEKIWTRRE LILQTYEQRLTKKIGDIFAKHEQVPDKARLLQEVAIYADKVDFTEEVVRFRSHMLQLEGL LKETAPVGRRMDFLLQELNREVNTIGSKVSDIEVTAVVLQVKTELEKIREQIQNLE >gi|290781409|gb|ADGP01000019.1| GENE 78 91028 - 91312 334 94 aa, chain + ## HITS:1 COG:BS_yloBa KEGG:ns NR:ns ## COG: BS_yloBa COG2052 # Protein_GI_number: 18677778 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 82 1 82 89 102 59.0 2e-22 MNFNLLNIGFGNVVMADKVVAIISPESAPIKRMVQEAREGNKLIDATFGRKTRAVLMMDN GQIILSSLQAETIAHRLVPVEEEPVWEEAGKVGE >gi|290781409|gb|ADGP01000019.1| GENE 79 91315 - 91932 616 205 aa, chain + ## HITS:1 COG:BH2512 KEGG:ns NR:ns ## COG: BH2512 COG0194 # Protein_GI_number: 15615075 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Bacillus halodurans # 3 191 4 192 204 186 44.0 2e-47 MADSGLLIVVSGPSGAGKGTICDALRARFPQVHYSISMTTRPPRPGEKEGVNYYFTDTAH FEALLAQDAFLEHAKVYDHYYGTPKQYVYDALARGEHVLLEIDIQGAMQVRKHYPQCLCV YIVPPNRQVLAARLHGRHTDSEEVIAGRLQKTQAELAWMKEYDYVIVNDRLAAAIEQMEA IIRAEACRCARNGNTLSRICAAYQE >gi|290781409|gb|ADGP01000019.1| GENE 80 91950 - 92159 384 69 aa, chain + ## HITS:1 COG:no KEGG:STH1340 NR:ns ## KEGG: STH1340 # Name: rpoZ # Def: RNA polymerase omega subunit # Organism: S.thermophilum # Pathway: Purine metabolism [PATH:sth00230]; Pyrimidine metabolism [PATH:sth00240]; Metabolic pathways [PATH:sth01100]; RNA polymerase [PATH:sth03020] # 2 65 1 64 69 69 57.0 4e-11 MLIKPSLESLMEKVDSKYTLVTLAAKRARELTDGDQPTVCADTNKVVSIAMEEIDAGKIR YESSKTGIK >gi|290781409|gb|ADGP01000019.1| GENE 81 92177 - 93406 1502 409 aa, chain + ## HITS:1 COG:CAC1720 KEGG:ns NR:ns ## COG: CAC1720 COG0452 # Protein_GI_number: 15894997 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Clostridium acetobutylicum # 6 387 4 386 398 351 49.0 1e-96 MLLKNKHVVFAVTGGIAAFKAAAAVSLLRKQGAEVKCIMTQHATEFITPLTLRELSGNPV AVSLFGEIPEFQVEHISLARWADILVIAPATANVIGKIAAGIADDLVTTVVMAATSPILL VPAMNTNMYENPIVQGNIEKLKQLGYGCMEPDAGPLACGVSGKGRMPEPQDIVQEIEFQV CRTTTLAHKRVLVTAGGTREPLDPVRFIGNHSSGRMGFAIAKAAAIAGAEVTLVSGINTL PTPRGVVRRIDVMTTGEMKAAVDSVYPQCDAVIKAAAVADYRAAHPASEKIKKDTATLHL ELAKNPDILWELGQRKTHQLLVGFAAETTRVLEYGMAKLRKKNLDMLVANDVSAEGAGFQ GDTNIATLLFADGTQEALEKMDKFALATIIVERVAALLAAHPERFEEDS >gi|290781409|gb|ADGP01000019.1| GENE 82 93617 - 94810 1482 397 aa, chain + ## HITS:1 COG:BS_metK KEGG:ns NR:ns ## COG: BS_metK COG0192 # Protein_GI_number: 16080107 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus subtilis # 1 394 1 397 400 586 73.0 1e-167 MVKNREFFTSESVTEGHPDKMADQISDGILDAILAQDPHARVACETVLTTGLIHVVGEIS TKCYVDIPHIIRNTVRDIGYTRAKYGFDCDTCGILVSLDEQSGDIAMGVDEAKERKEGKQ DEFDAIGAGDQGMMFGYATNETDDYMPLPISLAHRLARRLTAVRKNGTLKYLRPDGKTQV TVEYEDGKPVHIDTIVISTQHSPEVTREQIEKDLIARVIKPELTEGLYDEKTKLFINPTG RFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAA GLADKCEIQLAYAIGVARPVSIHVDTFGTGKTDNETIVGLIEKHFDLRPAGIIKMLDLLR PIYKQTAAYGHFGRNDLDLPWERTDKAEILRKEAGVH >gi|290781409|gb|ADGP01000019.1| GENE 83 94921 - 97281 2223 786 aa, chain + ## HITS:1 COG:BH2509 KEGG:ns NR:ns ## COG: BH2509 COG1198 # Protein_GI_number: 15615072 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus halodurans # 1 769 1 781 804 553 39.0 1e-157 MIADIIINTTAKQVQQTFSYTVPDSLPVQVGSRVLVPFGRRCEEGIVIALSRENSRTFSF TLKSIIDVLSVQHGFQEEMVRTALWIRDYYLCNAAEALRLFMVEKKGVRCQRRIVGGTLH GAAAVDEQIYTAVVHAGAVSRKVLESRFGAAAVARLLQNGTLQEKRVWKNTISDKMEEWL QIVPTVDTTVLKRRPKQRELWEFLVRKGECSLTELRENGFSREVARRMAADGLLVIQKKM RETTGAGPVTLSSLPWKLTAEQLAAISAVQQDTEGRTYVLHGVTGSGKTEVYMQLAAQVI REGKQVLVLVPEIALTGQIVRRFSARFGEDVVVMHSQLSQGERQANWLRMKEGGCHICIG ARSAVFTGVRNLGLIIVDECHDGSYKQEETPRYHAIEVARTRAAYYKCPVILGSATPSVR EYYLAEKGIYTLLELKYRVQGRPLPSVQVVDMREEFQRGRYEVLSPTLVELVEHTLQAGN QTIILLNRRGFSTFVMCRSCGFVVKCNTCDVPMVYHKDQELLRCHYCEARREIPKTCPAC GSPYIKFFGTGTEKAAAELHDIFPAARVIRLDQDTTRRKNGGDRIIEAFRRGDYDILLGT QMVAKGHDFMQVTAVGILAADSLLNLPNYLAAERTFQLLTQAAGRAGRGALPGRVVMQTY APEHYVVQYAKQQDFKGFYKEELAYRKTFLYPPFHQLIRILFQDEQETKVWQSAHTIASL LRSYVQEQGEAVEIIGPFVDAVKKVRNKYRAVILLKGADLTAIKKRIQQSSACFQKGIII DVDPAW >gi|290781409|gb|ADGP01000019.1| GENE 84 97307 - 97822 560 171 aa, chain + ## HITS:1 COG:TM1661 KEGG:ns NR:ns ## COG: TM1661 COG0242 # Protein_GI_number: 15644409 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Thermotoga maritima # 27 168 8 149 164 134 48.0 8e-32 MYTKYSNTGMVSNEVNNVAKLNIIKAGNPVLKAAAKPVPVITKHIKKLLDDMAETMYKAN GVGLAAPQINESLRLIVLDDGNGLIELINPEILETSTEMEEDTEGCLSVPGYYGIVSRYS KIKVKALNRRGKTVYYEPEHFLARIFQHEIDHLNGILFIEKAKNIRKVTEA >gi|290781409|gb|ADGP01000019.1| GENE 85 97819 - 98757 768 312 aa, chain + ## HITS:1 COG:YPO0241 KEGG:ns NR:ns ## COG: YPO0241 COG0223 # Protein_GI_number: 16120579 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Yersinia pestis # 5 300 6 301 315 259 45.0 3e-69 MRPWRIVFMGTPDFSVPSLKALKEAGHEIAAVFTQPDKERGRGKKVTAGPVKKTAEMYDI PVFQPTNLRTAEVEAQLRQLAPDVIIVIAYGKILPPSIVHLPMYGCLNVHASLLPKYRGA APIQYAIKEGDTKSGVTIMRLDEGLDTGKILKQAELSLDAEETTGSLFTKLATLGARTLT TVLADLPAYEAGAVAQEEAHATYTAKITKDMAALDWRQEAIVLERWIRTLDPSPGAYTQY AGKRLKIWSAQVVPHTSSCSPGTVIAVDKAHFTVQTGNGALRVLEVQPESRKRMKTGQFL QGTPLRVGEVLK >gi|290781409|gb|ADGP01000019.1| GENE 86 98832 - 100160 1033 442 aa, chain + ## HITS:1 COG:BH2507 KEGG:ns NR:ns ## COG: BH2507 COG0144 # Protein_GI_number: 15615070 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Bacillus halodurans # 2 442 5 450 450 308 37.0 2e-83 MNIRELAVRSLLLIWQDGGYSNIVVSRMIKKYALSDRDRRFYTELVYGTLRYMAMLDRAI GMLSKRSLQQMDAVCAAILRLGLYQLQYLDKVPPSAACYEAVALARKMGHEGMAKFVNAV LRNALRRPEVFVVPSRQEDEVLHLALTYHQQNWFIRRCLQQYGFEETVKLCRFFDTIPEL CVRIQTQKISREKAMAMLAEKGIVTRPGRYAPESLYIETNDAVQNLELLAAGRAMIQDEA SQLVAHVLDPQPGDVVLDVCAAPGGKTTHIASLGGSDCLVYGADIYEHKLQLIRENAEKL HLTNIRTILQDAVRIGERFPAKADRVLVDAPCSGLGILRRKLDLRWRKKEQDLMRLPSLQ TRILNGAAACVKPGGILVYSTCTINTAENAAVVEAFLQRHTEFTLLRAGETCSWPQPGKY IDVLPQRDGIDGFFIAKMRRDS >gi|290781409|gb|ADGP01000019.1| GENE 87 100162 - 101199 966 345 aa, chain + ## HITS:1 COG:CAC1726 KEGG:ns NR:ns ## COG: CAC1726 COG0820 # Protein_GI_number: 15895003 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Clostridium acetobutylicum # 1 336 1 335 345 298 41.0 9e-81 MLSLLDFTLPELQQFLEAHSIKKFRAKQIFHYVYKQNITVWEDMVQLPKQDRQKLQNLLE IYIPPIVSRLDSANGETVKLLVQLADGQTVETVLMRHNYGNSICLSSQVGCAVNCLFCAS AKNGFVRNLTMGEMQAQLLAFRRYVTTDLHSVVLMGTGEPLLNYDNVLRFLRTIHEAYSF YLGYRNMTISTAGIVPQIYKLAQEGIPVNLAVSLHASNHELRRKIMPIADTYAWEDIVRA AFHYFAVTGRKVTFEYILIRDLTCTPACAEELASRMAHKNVLINAIPINDNYDVGLRRPT LREMQAFVKILKKHHISVTLRREMGSEIQAACGQLRIQREAVDRK >gi|290781409|gb|ADGP01000019.1| GENE 88 101257 - 101967 840 236 aa, chain + ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 10 235 14 235 237 142 41.0 7e-34 MGTYGESRIGLVRKVNEDSFYISEQQDMLAVADGMGGYVGGEVASRTAVEAVAYYVSHYT REEPILLEKAVQYANACVLSKTIIDTSLEGMGTTLTMLQRQGNKMSWAHVGDSRIYVYHQ DVLQQITTDHTLVQVLLDTHKITLSEAAVHPQRHVLTRAIGVDKDLTVDTGNFSVFAGDR ILLCTDGLTSFVTTQTIQAVLQERENSERQCIHELLDCVYANGAKDNVTAILTTVE >gi|290781409|gb|ADGP01000019.1| GENE 89 101978 - 103918 2000 646 aa, chain + ## HITS:1 COG:BH2504_1 KEGG:ns NR:ns ## COG: BH2504_1 COG0515 # Protein_GI_number: 15615067 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Bacillus halodurans # 9 305 1 315 343 289 48.0 1e-77 MKVVEQETMTGHTLANRYQILEEVGTGGMAVVYKARDILLDRIVAVKILHAEYGNDHEFV TRFRQEAQAAAKLSHPNIVNIYDVGKDGDIHYIVMEFVRGETLKEYIEKHGHLPINTSIQ IAFDIGEALESAHHNGLVHCDIKPHNILVTETGRIKVADFGIARAINSSATMKEDKKILG SVHYFSPEQASGNTLDERTDIYSLGVVMYEMMTGVVPFEGDTPLSIALQHVQDAIPLPTK YNRRIPRLVERCILKAMAKNPDDRFQSVEELMSELRLSQGFVNSNKGAMPIIKKGFEGTV KLPPVPEKNTRGEGNIFNRFLDSVSRHSKKSIIIAMGSVFIIAFLWAFFSFGNFWSTQDI TVPDVTGKQMEIAQTMLTDKHLSVSIKEVDSSDVPVGEVITQTPIGGSVVKANRTIYLTV SRGNHGDTVLVPDLRGLTLDEATRKLKEIGLSVGTVTYADADRDDGKILQQTPSSPDKVA QNTTIDVVVSRVKVKEAAPVNVPDTRGMSLDTAMQTLNNAGISIGTVGNLNSNLPNAQAT VTGQSLRKGGRTADLYVTYPQTADTSSADVSKEGTGAMRSGKVNIHVPNGSSNPHVQIVL TDDNGSRTVYDKVQAGGDTVVKNVSGVGRTHVKVFINNTLVQDQYL >gi|290781409|gb|ADGP01000019.1| GENE 90 103938 - 104795 820 285 aa, chain + ## HITS:1 COG:BH2503 KEGG:ns NR:ns ## COG: BH2503 COG1162 # Protein_GI_number: 15615066 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 3 285 4 291 294 191 35.0 2e-48 MVGRVIKNYNGYYYVDVGPAGLWECRRRGKVKTKILVGDMLMITPIDTSKGVIEQVLARK NELRRPAVANVDQIMVVMTPAVPKLNYRLTDTLLASCMYQHLTPILLLNKCELNPHMTQW YTKYYRQCGYEVYAVSAYTGAGIGAVTARLDGKMTVFSGPSGVGKSSLLARITGREDLHI GAVSKKIQRGRHTTRHAEIIPLREQTYVVDTPGFSAVALASAAPEEIQNLFPEFVPYLGR CRFSPCAHMAEPDCRIKEAVKDEHIFRARYESYCQLFQAAKERKK >gi|290781409|gb|ADGP01000019.1| GENE 91 104797 - 105444 735 215 aa, chain + ## HITS:1 COG:BS_yloR KEGG:ns NR:ns ## COG: BS_yloR COG0036 # Protein_GI_number: 16078642 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Bacillus subtilis # 1 210 1 210 217 234 55.0 7e-62 MITVCPSILSADFAKLAEEIQDVEKKGARCIHLDLMDGHFVPNLTFGIPVVQAVRKYTQL PFDAHLMVEHPETYIDGLAAAGVTYVTVHQEACVHLDRVLQAIHDAHMKAGVALNPATPV TTLEWVAAQVDLILIMSVNPGFGGQRFLPYAVEKIKQARALLDASGNTCAAVQVDGGINR KTAPSVKAAGATFLVAGSAIFGASDRAEIIRFLQA >gi|290781409|gb|ADGP01000019.1| GENE 92 105738 - 106874 1176 378 aa, chain + ## HITS:1 COG:aq_138_1 KEGG:ns NR:ns ## COG: aq_138_1 COG0117 # Protein_GI_number: 15605717 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Aquifex aeolicus # 6 138 9 141 146 177 62.0 4e-44 MEAAEYMKKALALAKIALGYTSPNPVVGCVIVKDGEIVGTGYHHQAGAPHAEVLALQEAG DRATGATVYVTLEPCAHYGRTPPCARTLVQHKIKKVVIAMLDPNPLVAGKGAAILRQAGI VVEVGLLSAEAVKLNEVFIKNMLSNIPFIAIKLAQSLDGCIATRTGHSQWITNAWSRQYG QYLRSIYDGILVGINTILEDNPLLTCRVRREGQAVPHQPIRIVLDTYGRTPLSSQVVNDK TARTIIMTTAQCPQEKKEALLAAGVTVLTAPTANTGCVDLHAALQLLRQEGIGSILVEGG STIHGSFFDAKLVDKIYAFLGNSIIGGTCALCSVAGEGVDGLEECVPLHYDSIEIHDDNI LIQAYNVAREGAYVHWNH >gi|290781409|gb|ADGP01000019.1| GENE 93 106855 - 107505 578 216 aa, chain + ## HITS:1 COG:SP0177 KEGG:ns NR:ns ## COG: SP0177 COG0307 # Protein_GI_number: 15900114 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Streptococcus pneumoniae TIGR4 # 1 193 1 193 211 197 53.0 1e-50 MFTGIIEETGKIQSFKRRSDSIALTIQACKVLTDTQLGDSIAVNGVCLTVTSLTTDTFTA DVMHETMRRSSLQTIGSGDTVNLERAVAVGGRLGGHLVSGHIDGTGHIMRIQPDGIANIF TISAAANLVHFIVEKGSVALDGVSLTVTAVGDRWFSVSLIPHTLAHTTLLSKKPGAVLNI ETDIIGKYIDRLMHEKKDTVSNTGGLTLATLREQGF >gi|290781409|gb|ADGP01000019.1| GENE 94 107533 - 107997 834 154 aa, chain + ## HITS:1 COG:L0166 KEGG:ns NR:ns ## COG: L0166 COG0054 # Protein_GI_number: 15672978 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Lactococcus lactis # 4 154 3 153 154 205 68.0 2e-53 MAQIKEGKLIGAGSKYGIVVARFNEFISSKLLGGAYDALYRHGVEPDNITTVRVPGAFEI PLVAQKMAASGNYDAVICLGAVIRGATSHYDLVCNEAAKGIAQASLKTGIPIMFGIVTTE NIEQAVERAGTKAGNKGFDVACGAIEMVNLLKEI >gi|290781409|gb|ADGP01000019.1| GENE 95 108296 - 109159 1061 287 aa, chain + ## HITS:1 COG:BH2476 KEGG:ns NR:ns ## COG: BH2476 COG1161 # Protein_GI_number: 15615039 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 1 278 1 278 284 276 48.0 3e-74 MVINWYPGHMAKAKRLIQEHLKLIDVVVELVDARIPWSSTNPMIGTLIGNKPSVVVLNKA DLADAAEVRAWIQQYEREGRQVVALNSKEGKSGKKLVAVIRQSAAPKLAHWRQRGLKNRS VRTMILGIPNVGKSTLINRLAGRNVAKTADKPGETKGKQWVHLGEYLDLLDTPGVLWPKL ENQVSAYRLAATGAISDTVFDRQTVVLQLLAELRQWYPQELQRRFSLEQLGDTPLETLAA IGKKRGCLLRGGEPDWDKMYTLVLKEYREGKIGRLSLDHVAAVGSES >gi|290781409|gb|ADGP01000019.1| GENE 96 109156 - 109950 879 264 aa, chain + ## HITS:1 COG:SP1156 KEGG:ns NR:ns ## COG: SP1156 COG0164 # Protein_GI_number: 15901021 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pneumoniae TIGR4 # 8 258 3 253 259 189 44.0 6e-48 MKDIGKQTVREIEELVKTTDDLSTLSALLAADPRRSVQKLRQTLMRRALRAEAERERVLQ LYEPENMFYRQGIYEIAGIDEAGRGPVAGPVMIAAVILPPFWECAGLNDSKKIAPSKREA LYEKIMQEAVAVSCIAKERAEIDVADIYHATRQGMYEAVQALAVPPKAVLVDAMPLSELT VPHRSLIHGDAISASIAAASIIAKVTRDRVMREYDKVYPQYGFAVHKGYLTQAHADAIRK FGPCPIHRHSFEPIKSIVGFHRAE >gi|290781409|gb|ADGP01000019.1| GENE 97 109961 - 110416 545 151 aa, chain + ## HITS:1 COG:SA0098 KEGG:ns NR:ns ## COG: SA0098 COG1473 # Protein_GI_number: 15925806 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Staphylococcus aureus N315 # 8 144 3 140 392 155 51.0 2e-38 MTAEPVIQEIWRLLQARREEMREHRRWLHQHAEISFQETETSRYIYEFYKKRNMPVKRQA HGNGMWVTIGGKNPGKHVALRADFDALPIQEETGLSFACTTGAMHACGHDAHTAYLMILA GCLWDTRERWNGTVRILHQPAEEMRRAERGR >gi|290781409|gb|ADGP01000019.1| GENE 98 110413 - 111147 652 244 aa, chain + ## HITS:1 COG:lin2952 KEGG:ns NR:ns ## COG: lin2952 COG1473 # Protein_GI_number: 16802011 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 1 230 153 387 400 264 55.0 9e-71 MIVDGALQGIDHVLGCHVMNQLEFGGVFYHCGATQQARAKFTIQIQGKGGHGSSPHEAND AIVIAGHLVIALQTMVSRRISPMESGVVTIGSFDGKGEFNSIKDRVILEGDVRCMAESTR KKIEEIKRIAFGTARTYGCDITVQYQNDYPVLWNDPSLTKRVVREWKKAGIAPVTDCGPL NPSEDFSYYSQQVPSCFFYIGAQPAGKAYPHHHPKFDIREEAMMKAARAMTGATLTCLAE KEMR >gi|290781409|gb|ADGP01000019.1| GENE 99 111357 - 113255 1397 632 aa, chain - ## HITS:1 COG:mll0818_2 KEGG:ns NR:ns ## COG: mll0818_2 COG0171 # Protein_GI_number: 13470971 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mesorhizobium loti # 297 533 8 237 299 132 37.0 2e-30 MLTIGLAQIDIHAGNPRYNTETMKQQIRRAEDAGCDVIIFPELTIPGYFIGDVWEQADFI ADAIACGEEIRQAADTITVIFGNVAMDPRRRQKDGRPRKYNALFIAQNRRFIGPENSPYP YYIKTLLPNYREFSDTRYFTSLTEVAAEQHTDPTALLSPVTLSLGAAGNLCLGPLICEDS WDDSYPLKPMETLAAQYPIDLFINISASPFTLGKNRRRHRLFSKTLKKLHCPAVYVNCTG IQNNGKNIYTFDGSSSAYNKDGSLAYEGTAFAEELAIVRYNETTRHFATPQQNHQPPTEI ASIYTALHYGLTSFLAASGLQKVVIGVSGGIDSAVNAALYATVLPPENLLLVNMPTRYNS ETTRSLAKKTALNLNCPYAVIPVEDSVLLTEQQLQQVTNRQPRAARAPLTITQAVLENVQ ARDRSSRILAAVAAAFGGVFTCNANKAELSVGYATLYGDSAGFLALTGDLWKHQIYDLAR YLNDHVFKREVIPQGTLDIVPSAELSAHQKVDEGRGDPLIYPYHDYLLAAFIEFWQRPTP ATILRRYAAGTLEAYLGCPVQIGDIFPTTAAFIADLEKWWNLFAGFAVAKRIQSPPILAL SRRAYGYDLRESQLTPYYSQEYKELKKQLLQS >gi|290781409|gb|ADGP01000019.1| GENE 100 113367 - 113930 472 187 aa, chain - ## HITS:1 COG:CAC3341 KEGG:ns NR:ns ## COG: CAC3341 COG0655 # Protein_GI_number: 15896584 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Clostridium acetobutylicum # 1 187 1 208 208 186 46.0 3e-47 MKVILLNGSRRAEGCTYTALSCLAATLNEAHIQTEILHAEPEASCLTAAAEKIKACDGLV LGSPVYWASPTGEIIHFLDHLCPLVGTSLHHKVGAAVVSARRAGTTATLDVLTKYLSYHQ MILVSSNYWPMVHGNTPEEVRQDAEGLQIMQVLGKNMAWVLSCLEAGKQAGIVPPPTPPK IMTNFIR >gi|290781409|gb|ADGP01000019.1| GENE 101 114150 - 114605 189 151 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 1 151 1 153 158 77 29 4e-13 MSVLADEIEKLILHKLLKEQEEHVVLKRNELADELNCAPSQISYVLSTRFSNDKGFQVES RRGSGGFVRIVRVSDKKKEHAPAIRKEQMPVITVSLKDLDALLYRLLNQQRLGKREAVLL HHMFEALFKEVKDEQQRMAVISRVLASLRMR >gi|290781409|gb|ADGP01000019.1| GENE 102 114621 - 115070 503 149 aa, chain + ## HITS:1 COG:CAC3191 KEGG:ns NR:ns ## COG: CAC3191 COG3880 # Protein_GI_number: 15896439 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 50 145 75 170 175 74 37.0 7e-14 MVKKEDEKQPVFRVLTGKGKGLFSAAADGGARDATFFRLLTYGADEAESERRCPQCGCTY SQFQQTGLVGCARCYTTFYEELVQVLQRVQGAVHHPGKVPNHGHGVFSTDIRVRRLYQQL QAAVRAGRSEEAARIREEYGQLKERMRKQ >gi|290781409|gb|ADGP01000019.1| GENE 103 115083 - 116126 383 347 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764772|ref|ZP_02171826.1| ribosomal protein L5 [Bacillus selenitireducens MLS10] # 12 345 14 361 365 152 31 1e-35 MKVKLDDRPALWQYEAAPEADIVLESRITLHRNLTSYAFSPFLSPEGRRQLSTRIHSCIS RLASGEAQTWQWWDAETASVRERAWYIRRHLLLPTEQIVGSAVAVRADEGAVIRVNTEDH VQISVVHNGLQLARCRECADGYDDRLEAVLPFAFHDEFGYVTANPARLGTGMEVSVLLHL PALVGSRRIARILQRAVRPGLTLYTDAGEEGQVFQLSNQITLGLTEEELIRRVDNAAAVL IQEERKYRRHWQVSKADFLRDRIYRAYGILRYAYRVTEAEGGRLAGAVQWGITSGLLQGP SYTFAALRKVLPAHEEEDAETSVRRRAREIHSILAAVKVQGDDDGKK >gi|290781409|gb|ADGP01000019.1| GENE 104 116113 - 117504 1463 463 aa, chain + ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 429 1 430 458 438 50.0 1e-123 MAKSKTQYVCKACGSISSRWLGKCPQCGAWNTLIEQTVTPAATSTNRRRKRQGEAAAPTV LSAIAMEATSRLETHIGELDRVLGGGLVRGSIVLLSGDPGIGKSTLVLQLAAAIGKQGYA VLYGSGEESAAQIKMRAQRLGITGTEIIVQAETSLENILREAGTRRPALVIIDSIQTMFC GESDGTPGSLAQIRECTGTLLTFAKSEGITVLIIGHVTKDGNIAGPRVLEHMVDTVLYFE GEKNYQFRVLRSIKNRFGSTRESGLFTMKAGGLAELTNPSRLFLAERTAAPAGSAIVAVM DGLRPLLTEIQALTTRSVFPVPRRTASGMDYNRLLILLAVLEKRAGLQVNTQDVYINIVG GLKISETAADLAVAAAICSGMQDRPLDGRLLVLGEVGLTGDIRRVSHAARRVREGVKLGF TACILPYGNREEVEGENITGCHLYYVKTLREALETAFSFGNKN >gi|290781409|gb|ADGP01000019.1| GENE 105 117596 - 118780 804 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 [Bacillus selenitireducens MLS10] # 28 390 29 389 397 314 48 2e-84 MNENMSHRDDKTTKGTKKFNSLVIADNIMKGVMVLIFMVVFVLLADRFIASAFFDREVGL DFFNGSIFGTTLAKAAVYFLGAVCGGVVGFLLSPFAIRAIWQSIHRIEAGLGDFEGQDLI IGTLGLLFGLIIANLVGLTFSRLPIIGAYGPIVFSVIFGYAGISVALKKKTEILSFVSSL RMGRQQREAGKGKREEFSGKLLDTSAIIDGRIAEICSTGFLEGPLLVPVFVLEELQLIAD SSDSLKRNKGRRGLDILKQIQEEKYVEVRILNDDFEDTQGVDSKLVRLGRKIRAKVVTTD YNLNKVAALQGVVVLNINELSNALKPARIPGEQMQVMVVKAGKEEHQGVAYLEDGTMIVV ENGEKYIGKTVSVMVTSVLQTAAGRMIFVKTAEE >gi|290781409|gb|ADGP01000019.1| GENE 106 118788 - 119969 1427 393 aa, chain + ## HITS:1 COG:NMB1512 KEGG:ns NR:ns ## COG: NMB1512 COG0245 # Protein_GI_number: 15677365 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Neisseria meningitidis MC58 # 235 389 5 159 160 170 54.0 4e-42 MKVSVIIVAAGSGRRFGYERNKLFYPLCGKPVLQHTLEHVFAAKSVREVIVVHAECDYHD IVQVTEALHPSVPVRYVLGGAERGDSVYNGLAATADDTDIVMVHDGSRPLAGPEWFDNAL AVMKTSRAAIYAIPVKDTIKLRSGDSMYGTQSVRTLERSRLVAAQTPQIFHKELLLKAHE YAKKHHVTGTDDASLVEALGEPVTILAGDERNHKVTTMEDVPILEFYLQGPVEHRVGSGY DVHPLEPHGKLILGGVEIPFEKGLSGHSDADVLIHAVIDALLGAAGLKDIGTYFPDTDAA YKNISGVILLQKVRQILVENACRIVNVDVTLLAQRPKIKPYVSQMIANIAAALQLEPEAV SVKATTTEHLGFVGKEEGMAAQAAAMVIKYRSV >gi|290781409|gb|ADGP01000019.1| GENE 107 119992 - 121449 1624 485 aa, chain + ## HITS:1 COG:BH0109 KEGG:ns NR:ns ## COG: BH0109 COG0008 # Protein_GI_number: 15612672 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Bacillus halodurans # 1 479 1 480 485 511 53.0 1e-145 MAKKFRVRFAPSPTGPFHIGGARSALFNYLIAKHEGGDFIVRIEDTDRKRSTRESEENIK EALRWLGISWDEGIDAGGSHGPYRQTERLDIYKQYTERLLAEGKAYYCFCTPEELEAQKR AQMDQGETPVYTGTCRDLPPETVQAYLAAGRPYVIRIKTPRNETLAFDDLVRGHVSFDSN KVGDFVIVKSDGIPVYNYCVVLDDALMDITHVIRAEEHLSNTPRQLVLYKALGFQAPTFA HVSLILGKDKKKMSKRHGATSVQQYRDLGYLPEAIINFLSLLGWTPGTEQEIFSRDELIR QFTLARVAKNPAVFDIEKLNWINFHYMKQLTEDELLALCLPHLQNAGYVSGTLTPERREW VKQVVAALRDHVQYGAQIAAVSKVFFTEEYAPENEEAAAVLQEETAQPVLTCFAQELQAL PEVTAATVQPLFKKVQKQVGVKGKFVYMPIRVALTGVMHGPDLHVIVALMGREKVLARLA RSGSI >gi|290781409|gb|ADGP01000019.1| GENE 108 121764 - 123209 1652 481 aa, chain + ## HITS:1 COG:aq_1068 KEGG:ns NR:ns ## COG: aq_1068 COG0215 # Protein_GI_number: 15606347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Aquifex aeolicus # 4 481 3 491 495 464 46.0 1e-130 MRDLYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLG YAVTHIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHM PEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPM DFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEI AQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHY RSPLDFTDARLEEMTRSLERLRTSIMNVLELATMPAGGKSAEAAALLTEAQQVAEDFETA MCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKRIFKMMTDILGILESA WNGQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQALGITIEDSPQGARWK K >gi|290781409|gb|ADGP01000019.1| GENE 109 123206 - 123682 191 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 30 146 10 129 141 78 37 2e-13 MKFQQVQALKHKAYAAFVENRQLDVPPVLPYHMDAITLAFVGDAYYALFLRRRLTALGIP AVQVLHALAAEFVSAKCQSFVYTCLQSFLTEAEKSLCRRSRNAYSQVPKSASAAEYHNST ALEALIGYLVLDGQEARLQAVMQHVLAAVRAYCQKKHI >gi|290781409|gb|ADGP01000019.1| GENE 110 123691 - 124443 575 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 6 249 8 254 255 226 44 6e-58 MSGLAWITGRNSVLEALRAGRKIEKIYIASSPHGAALQEIMSLAKAAHIVVEERDRKALD RLVPQQRHQGVAAQAQPIAMTSWETCAATAARRGEVPFFVLLDGIEDVHNMGAIIRTAEC AGAHAVLIPKRHSAPINETVGKTSAGAVEYMPLVSIGNTTQVLKALKKAGFWIIGADMNG EADYFHTDMTMPLVLVIGNEGKGISRLVKENCDILVQIPMFGHVNSLNASVAAALLIYET VRQRGIGTEK >gi|290781409|gb|ADGP01000019.1| GENE 111 124440 - 124979 660 179 aa, chain + ## HITS:1 COG:BH0114 KEGG:ns NR:ns ## COG: BH0114 COG3688 # Protein_GI_number: 15612677 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Bacillus halodurans # 1 177 1 170 170 106 41.0 3e-23 MKTLLIVDGYNIIHAWPELKAVFTRDREHARERLVELLAEYAGAKGVEVFIVFDAIYTPG EMTTRQIGTFCTVIFTSCGETADSYIERTVYEKLKTDDNIYPLPSIYVATSDGPEQAQIL GAGAYRLSARELREKVQRTHREQRYTEARMQQGCGHTDIGASVRNAEVREKLEKMRRSK >gi|290781409|gb|ADGP01000019.1| GENE 112 124986 - 125675 853 229 aa, chain + ## HITS:1 COG:BH0115 KEGG:ns NR:ns ## COG: BH0115 COG1595 # Protein_GI_number: 15612678 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 27 216 27 216 217 238 63.0 9e-63 MAEHAQHDIDRRFVDKTDEEVVLWLQKTHDDRAMEYIVHKYKNFIKSKARTYFLVGADRE DLIQEGMIGLYKATRDFRAEKKVAFRVFAELCIMRQIITAVKTATRQKHVPLNSYISLSK PLFAEESERKLEETISALTVTDPEEVLISWENYHDIQLHLQELLSTLERRVLQLYLEGRS YQEMSLSLGREAKSIDNALQRVKHKLEDYLEKRDSSETVPKKTIDRKSK >gi|290781409|gb|ADGP01000019.1| GENE 113 125720 - 125956 402 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968524|ref|ZP_06560063.1| ## NR: gi|290968524|ref|ZP_06560063.1| preprotein translocase, SecG subunit [Megasphaera genomosp. type_1 str. 28L] preprotein translocase, SecG subunit [Megasphaera genomosp. type_1 str. 28L] # 1 78 1 78 78 89 100.0 1e-16 MITVLEVLVFILALCLIGVVVAQKSKSQGMGAGFGGGAEDLFGSRARGMDALLSKLTIIL SIIFAVLTLVLGGLMNSY >gi|290781409|gb|ADGP01000019.1| GENE 114 126009 - 128312 1305 767 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 46 698 44 699 730 507 40 1e-142 MELDLTRAIINICKAAEPEGAGVEDCAEKLHLKGEQLPELFAVFADLVRSGKLMKIHGDQ YGAAKHTQEIIGIYKGYTDSFGFLLTEAEQEDIYIGERYRHTAMNNDKVAVRILPSAQRR HRQEGEVVRILERANTRIIGTFMRERGGCFVHPDDERIHEDIYIPEAQTGAARSGARVAV TVTTWPTEKRKAEGTVTEIIGYDGDRDLAVKVIMAQHDLPFAFPPEVLQEAQSLSTKVSL QEGRTDYRNRRLITIDSEDAKDLDDAIDIERLPNGTYRLGVYIADVGYYVRPHTALDREA YARGTSVYLVDRVVPMLPEALSNGICSLNAQEDRYAMACVMDINRQGRVEKAKIGPAVIR VARRCNYTEIKKALCDSIVPDDLAPFLPALRQLQEVTTWLKEMRMRRGALDFDFPEYKII LDAEGTPLRLDKRERTIAEQIVEESMLIANETVGTYLKNTKNPSVYRVHEKPEAARMEML RTVLSGFSLPFPTGTDPQPADFQALLTATRGTPEEAVVQMMTLRSLQQARYDIQNLGHFG LASACYTHFTSPIRRYPDLLVHRLLRQYWQKGRLSEAEAAHSAAFYTTAAEQASMRERIA VEAERETEAVKKAQYMMPFIGEPFQAHITGLAPFGMFVGLENGIEGLIHISYLTEDVYTF DETTYTLRGTYGGHVYHLGDALEVTLARVNMERCEIDFVPGTVDGLADLQKLLAAGEARR KKTGRNRSGKDKIKDKPRGRRGKNGNGKGKKRSGRAVGRKKHRRSGK >gi|290781409|gb|ADGP01000019.1| GENE 115 128325 - 128795 412 156 aa, chain + ## HITS:1 COG:BS_yvaI KEGG:ns NR:ns ## COG: BS_yvaI COG0691 # Protein_GI_number: 16080413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Bacillus subtilis # 4 155 2 153 156 175 60.0 3e-44 MAKPKSGIKYIAENRKARHDYFIHDTYEAGIALTGTEVKSLRCGRVNVKDSFCRLEGGEV WLEAMHISPYEQGNRFNHDPLRTRKLLLHKYEILKLIGKVKEKGYTLIPLNLYFKKGRVK VTVALVTGKKLYDKRQASAEKEAKREMDRRLKERRY >gi|290781409|gb|ADGP01000019.1| GENE 116 128806 - 129153 357 115 aa, chain + ## HITS:1 COG:lin2520 KEGG:ns NR:ns ## COG: lin2520 COG1393 # Protein_GI_number: 16801582 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 3 105 4 106 117 105 50.0 2e-23 MIFICYKKCSTCRGIQKILEEKRLHYSLREIDKEVPTAAELADWQQRSGLPLKRFFNTSG RIYRELHIKEKLPQMTEAEQLALLASDGMLIKRPILLAGREVYVGGDVKKYLENR >gi|290781409|gb|ADGP01000019.1| GENE 117 129410 - 130294 1017 294 aa, chain + ## HITS:1 COG:SA0470 KEGG:ns NR:ns ## COG: SA0470 COG1281 # Protein_GI_number: 15926189 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Staphylococcus aureus N315 # 16 286 16 288 293 185 35.0 1e-46 MTVQDKIIHYTTEESIRLAVAVTKGITEKARQCHRLAPVACAALGRTMTGALLLARDYKN REGVSIVIRGDGPLGTIHVDSFDTNKVRGFVEYPQIKLPLKADGKLDVGTAVGKGTLQVT RFTPRQDTYTSRAELVSGEIAEDLAYYLYTSEQIPSTVSLGVLVARDFTVAAAGGFLVQA LPGAREEDLARVEKNVQDIGPVTSYLQEDPQGERLAEKIFAGLHFRELFRQEAKWQCTCS LQRMKRALLSLRAQDKELLLQDPQVEMTCRYCGTAYVLTRKELATLYGTTKKEG >gi|290781409|gb|ADGP01000019.1| GENE 118 130297 - 131091 857 264 aa, chain + ## HITS:1 COG:PH1143 KEGG:ns NR:ns ## COG: PH1143 COG0005 # Protein_GI_number: 14590971 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pyrococcus horikoshii # 1 256 1 260 265 247 50.0 1e-65 MGKIAVIGGTGVCDTRMLTDIREDRLDTFYGPIQYIKGTYKGKEIIFLPRHGKNHSIPPH LINYRANILGLKRLGVTAIFTTTAVGSLNLKFKPNEFVLPHQFIDFTKTRHTSFFDGGEN GVVHADMTEPYCRHLQRAVLKAATLLGDYTIHHGGTYVCTEGPRFETPAEIAMFAKWGGD VVGMTNVPEVCLAREAEMCYTTVSMVTNFAAGISAEMLTHAEVLTCMEENSERIRRLLMK AVEIYEDGDCRCRHALDYYGGFMV >gi|290781409|gb|ADGP01000019.1| GENE 119 131095 - 132156 1053 353 aa, chain + ## HITS:1 COG:TM0911 KEGG:ns NR:ns ## COG: TM0911 COG0182 # Protein_GI_number: 15643673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Thermotoga maritima # 3 340 7 332 343 311 52.0 2e-84 MDTLYWQKGSLQVLDQTVLPEKEVYRTCTAWQEVRDAIAVLAVRGAPAIGVAAAYGMVLA GKALVRERPSLTAAEFLQAFHAVGKQLEQARPTAVNLHWAIARLVSMADTLSAQPVSCIV AAIETEACRIQAEDLEINRAMSRFGAEELLKQDKPLTILTHCNAGALATAGIGTALGVIR ALHAKGRLLRVYADETRPLLQGARLTVTELMADHIPVTLITDNMAAWVMKTKGVDAVIVG ADRIAANGDTANKIGTYGVSILAKEHGIPFYVAAPLSTFDLTLASGADIPIEERNADEVR TVRGTPIALPATAVFNPAFDVTPHTHIQAIFTEKGVIRTPDTAHIDSFFRSHH >gi|290781409|gb|ADGP01000019.1| GENE 120 132177 - 133418 1663 413 aa, chain + ## HITS:1 COG:PAB1372 KEGG:ns NR:ns ## COG: PAB1372 COG0499 # Protein_GI_number: 14521701 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylhomocysteine hydrolase # Organism: Pyrococcus abyssi # 5 410 10 415 422 499 61.0 1e-141 MESIIRDLALAEQGHKKISWVERYMPTLNAIGDRLRKEQTFKGKTVCVSVHLEAKTAYLA KVLHEAGANVMVTGSNPLSTQDDVAAALVEDGLTVYAWYGATDEEYFQFLNKSLDHKPHI IIDDGGDQVNLLHTTRQDAGVNLLGGAEETTTGVVRLHGWDKAGTLKFPMIAANDSYCKY LFDNRYGTGQSTWDGIMRTTNLTVVGKKVVIAGYGWCGRGCAMRAKGLGAHVIVTEVDPI KAIEAVFDGFEVMPMAEAAKAGDIFVTLTGDKDVIRGEHMKHMKDGVILANAGHFDVEIN KVELEALAVRKFEARHNIEGYELPNGHRINLLAEGRLVNLAAGDGHPAEIMDLSFAIQAL AAEYILKNHAQLENHVYVLPHDIDNEVARIKLQSMGYAIDALSAEQKAYLNME >gi|290781409|gb|ADGP01000019.1| GENE 121 133435 - 134718 1472 427 aa, chain + ## HITS:1 COG:MA1276 KEGG:ns NR:ns ## COG: MA1276 COG0402 # Protein_GI_number: 20090140 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanosarcina acetivorans str.C2A # 22 425 36 439 442 357 45.0 2e-98 MKKLITNVALYQDHSIKEGKNIAFTDDRITDFPDHPDRTAYDEIIDGNRMLAMPGFVNTH NHIAMTVFRSYADDMQLMDWLMQKIWPAEAKLDSDIVYAHTMLGIAEMIRCGTTSFADMY FFMNDVARAVETSGIRAALCRGVTGITPNAQEALAESKEFYHTWHKKADGRITVMLGPHA PYTCPPDYLRQVVDLAHELGAEIHIHLSETKGEVQDIKEQYHKSPIALADELGILDCGCL AAHCVWVDEDDLNIMARKHVRVAHNPGSNFKLAGGIAPLGEMLKKGITVGLGTDGASSNN NLDIVEEMHLAALVHKANTLDPLVIPAETALQLLTEGGAKCLGYTDVGKLEKGYKADITL IDREGLHWYPKHNTMSLFAYSANSFDVDTVIVDGKTLLRHKAFTTIDIEKVKAEAERTKE KLFSQLD >gi|290781409|gb|ADGP01000019.1| GENE 122 134889 - 135506 665 205 aa, chain - ## HITS:1 COG:BH2356 KEGG:ns NR:ns ## COG: BH2356 COG1974 # Protein_GI_number: 15614919 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Bacillus halodurans # 8 203 4 204 207 204 54.0 1e-52 MEITEKSLTTRQRQILEYIRACVHQYGYPPSVREICQEVGLSSTSTVHSYLQALEEKGYI RRNPTKNRNIALVDEGNWRSKKLVPLPLVGQVRAGEPIFAEECVEDVYPFAADFIGDDDA FLLTVRGDSMKNAGILEGDLLIVRRQNTAQNGEIVVALLEEEATVKRYFRESQAIRLQPE NEAYEPIYTRHCQILGKVVGVFRRY >gi|290781409|gb|ADGP01000019.1| GENE 123 135676 - 136035 254 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968535|ref|ZP_06560074.1| ## NR: gi|290968535|ref|ZP_06560074.1| LysM domain protein [Megasphaera genomosp. type_1 str. 28L] LysM domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 119 1 119 119 248 100.0 9e-65 MKKTIKRNPSSLPTASITYIWRRFFTGIFIAACIAFAGMQLGWASHPHNTSYVTVYVREG DTIWDYANLAADSHTDVRQVMCDIMTVNDLPGNAQIHPGQVLKIPVSPERAEQVKKGLP >gi|290781409|gb|ADGP01000019.1| GENE 124 136277 - 137314 803 345 aa, chain + ## HITS:1 COG:aq_775 KEGG:ns NR:ns ## COG: aq_775 COG1559 # Protein_GI_number: 15606156 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Aquifex aeolicus # 27 345 11 325 326 155 34.0 1e-37 MDKKAFFRSGQFHGNRIHGIYAGIVCLIVLSILGSALYFLPCFWAVPKRGYFRVVPSQTG AATAQALQRQGFIQSPGLFRFFLSVTGYGKQIKAGEYALHSQMSMYALVRKLTCGTSDAY EVVIPEGYTVRRIARAVASHGRISEQAFLQAANNDSLLYPYMRTSRPVVFKAEGFLFPDT YALPYTANADEAVRIMLDNFNRKLTPARRQRLQAAHMTVTEWVTLASLVEREAKFQADRQ PIAAAFRQRLRIGMKLQSDASISYAMGNHKSTYDITDTQYASPYNTYVFAGLPPGAIGNA GLPCLDAVLQAQPTANIYFVADTRGHNHFAATYAAHQKNVQEYLR >gi|290781409|gb|ADGP01000019.1| GENE 125 137311 - 137901 653 196 aa, chain + ## HITS:1 COG:BS_yrrM KEGG:ns NR:ns ## COG: BS_yrrM COG4122 # Protein_GI_number: 16079790 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Bacillus subtilis # 8 195 26 216 217 101 30.0 7e-22 MKTLLAEMEAYGRTQGLPLLRAAELPLVQRLAAQQKPQRILEVGTAIGYSALQIIAQAPP HAELITIEADAARAAAARAYIARSPYATQIHVHCGDATALLGNLQGPWDLVFLDGPKGQY GRQLQLLLPQLRPGALILADNIRYHDMLYREGTLPHKHRTAIMRLRAFLDYIGDRRHFET VFFENGDGLTVSRWKG >gi|290781409|gb|ADGP01000019.1| GENE 126 137914 - 139134 1136 406 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 2 399 5 401 406 434 52.0 1e-121 MELLAPAGNMDKLKAALLYGADAVYLGGKSFGLRAFSDNFSPEEMEAAIAYAHERGKRVY VTVNIFPHHRDLPGLPAYLRQLRDFHADAVLVADPGIFGMARETVPDLPIHISTQANTTN WAAVKFWYEQGASRVVMAREVGLSDIKEIHDRVPVELEGFVHGAMCISYSGRCLLSNYFT QNRDSNRGQCVQCCRFKYNIVEETRPGEYFPVVEDERGTYIFNSKDLCMLPYLPDMYQAG LHSLKIEGRMKSIHYVATVVKVYRQAMDAYVADPEHFSVRSEWIEELEKISHRPYTRGFA VSRPTEADQVYSHSCNTQTHEFIGVVQEYDAARRMVWVEQRNHFKVGQEVEFLQPRGETV RLRLPRLVTADGTEVEAARHPQERIGIPCLQPLEAQSLMRRRVREK >gi|290781409|gb|ADGP01000019.1| GENE 127 139131 - 139382 296 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968540|ref|ZP_06560079.1| ## NR: gi|290968540|ref|ZP_06560079.1| hypothetical protein HMPREF0889_1675 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1675 [Megasphaera genomosp. type_1 str. 28L] # 1 83 1 83 83 143 100.0 3e-33 MTATLSPEWVYFQVAPSAMTWVTRFVEGCEYFGVVTAVWGKKGIGCVRTTADTREITTAF LQDLPLSVTIVSYAEIMKMTEAE >gi|290781409|gb|ADGP01000019.1| GENE 128 139474 - 141150 1782 558 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0995 NR:ns ## KEGG: Acfer_0995 # Name: not_defined # Def: ATP-dependent endonuclease of the OLD family-like protein # Organism: A.fermentans # Pathway: not_defined # 1 548 1 548 552 617 57.0 1e-175 MYIKSMHIENYRNLRDVTLHFHESMNYLVGENAIGKSSFLRLLSLICKGQVIPEQDYADV TRPIVVTLELVLLRPGDQGFAFDRQEDRRTVTLRLEKNVEEFLPRLYNLDSGELVPPEII RCVRYLENASFHDPGETPVWVYRAVEEKLETVLHVRAENLTPCIREFITREVQVGNRDTS YYVNIFLLSRYLRRQDCPVADNMKFISLVALRLLTQIYEMMQSHAAPLERSLIINENGER LLPLWVSIDEPEIHLHPYMQRSILQYYQELLENRDPKFCKLLHELFHIDGLRGQLFVVTH ATDSLAGDYRHIIRFYRNDAQQVQAACGSAFSFDEEIEKHLLMHFPEVKESLYSRSVLIV EGETEYGCFRYFGKTLQVPFDYYGICLINARGESSIGKIKTLLEAFHIPVAALYDGDVKR LRCHEKQVYFTDEICFEMDLVTRLLQVGKRRELDRIINAAAGGHGRATADMLKRACRKLA INYHDYPPKLLQHVNSRNYQALCVYYFAWLYSNKGVILGRLIGQSLQAEEIPPAFCRVIR AAGTFASVRGKQEKEMNL >gi|290781409|gb|ADGP01000019.1| GENE 129 141147 - 143291 1965 714 aa, chain + ## HITS:1 COG:YPO2165 KEGG:ns NR:ns ## COG: YPO2165 COG0550 # Protein_GI_number: 16122397 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Yersinia pestis # 1 605 2 607 642 461 42.0 1e-129 MKVFIAEKPSMARELAKCLPGRMRREKGWIQCGDDAVTWAYGHILQQAEPQAYNPKYAYW RREDLPIIPDRWQLLVSPGSKEQFAVIKALIEKADSIVHAGDPDREGQLLIDEILEFVGN TKPVERILLNALDEKSIHEALRNLKNNKTFCHLKDSALARSRADWLIGMNLSRAYTLAAR AQGHGKVTFPIGRVKTPTLALVVRRQRELENFTPVHYVILKAVFTHKNGPISAQWKPRDT QAGVDAEGRCLSAASVQAVMRKLQEQPHGVIEERKKTKKKEMPCLPLSLSALQVAAGKRY GYKPQEVLETAQQLYERKLTTYPRSDCAYLPRNQFGDRHKILADLQAWHGGSLGQWAANA DASLCSRAWNDSKITAHHAIIPTTVRCRAETLTPIQQRIYYLIAQAYVAQFYPPHEYEQT RLVIRCAEELFVAHGKTVTVPGWKILYESEKKADESEKQPLPQVRKGDNVVYTDGRMEEK ATKPPARFTAAGLLAAMKEIYKYVKDESLKKTLKDVQGIGTEATRATIIKELMERKFLLE EGKKGYLVPGPQAYVLIDSLPETLSYPDETAIWEERLHQISLGKEKLATFLADQIAFLQR LLASAGVGTASAARKCPVCGAVLRLRHGKFGAFYGCSAYPSCRYTTTAAASSAASRPDRN TEYICPQCQGTLQRKNGPYGIFWACNQPSCRFTVKDIHGVPGIYEERRPADAKR >gi|290781409|gb|ADGP01000019.1| GENE 130 143278 - 144552 745 424 aa, chain + ## HITS:1 COG:no KEGG:Msm_1762 NR:ns ## KEGG: Msm_1762 # Name: not_defined # Def: hypothetical protein # Organism: M.smithii # Pathway: not_defined # 56 394 38 365 389 109 27.0 3e-22 MRNDNAKTDYTAIVAAYAKQDRRHWRRQDYYTYAYSLQKLRQYEAGHGVAREGLLRWPQD ERLGRVYGWCVYYAYILPFRREAGNRDVYFRAVRSILQYCRQSPYTPYERTVWHLLQTFQ GDPHLSHAERDRYISALDPELLAANACHADGEGILSCTQSPREKWYALKTKYAVKLKQYD RCIALCEEALRRFPECHNNNDIWFSYRIAYCHLLQGQTDRSEREFQALLRYSRHWIVYRG LMYAAVRKKDDRKALQYGSMAMLAPGEVTAKIHVLTELATLLRNRQDMQTAYWHEAWTVY WREKKHWHMEEALRQRVRQSPFPVLTPDELQTALFSFWRTTAHAGEPLYTGSIARLLPAE TGGFVRLYTGEEFFFGKEETARHPWHKGQPVTFYLSCPEGGAAARRAVHIQSLPDGSVDK GVGI >gi|290781409|gb|ADGP01000019.1| GENE 131 144549 - 145073 513 174 aa, chain + ## HITS:1 COG:CAC0025 KEGG:ns NR:ns ## COG: CAC0025 COG0717 # Protein_GI_number: 15893323 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Clostridium acetobutylicum # 1 171 1 171 173 262 73.0 3e-70 MILSGKEIFKHLGKEIQIEPFDPKRINPNSYNLSLHNELLVYEHTELDMAKPNSTRKIHI PASGYVLQPNILYLGRTNEYTKTDGYIPMLEGRSSVGRLGVFIHVTAGFGDVGFAGYWTL EIFCVQPIRIYPDVEICQIYYHDIDGEYDRYKEGKYQNNTGIQASMLWKDFKKK >gi|290781409|gb|ADGP01000019.1| GENE 132 145086 - 146063 1082 325 aa, chain + ## HITS:1 COG:BMEII0898 KEGG:ns NR:ns ## COG: BMEII0898 COG3191 # Protein_GI_number: 17989243 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Brucella melitensis # 6 322 8 329 335 202 43.0 1e-51 MIQEISLQAIQGVRIGNAENTRGGTGCTVLLFPHGAVCSVDIRGGAPASRETALLDPVAT AETVHAVLLSGGSAFGLAAADGVMRYLQEPGVGFATRCGPVPLVVGSCIFDLPCGDIVYP DAAMGYAACRHSEENAPQEGNYGAGTGASVGKIAGVSRMMKAGLGMFAVQSGALQVGAVM VVNALGDVLSEKNTVLAGLRTPDGGALASTQQYVWEHMEAVSTIFTGTVENTTIGAVITN GGGTKTQMKKVAAMASNGLVRAVSPVNTTADGDSIYAASVGKVPASVDEMGILASYAVTC AVRRAVRCATGAYGIPARRDLIKNK >gi|290781409|gb|ADGP01000019.1| GENE 133 146167 - 146709 843 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968546|ref|ZP_06560085.1| ## NR: gi|290968546|ref|ZP_06560085.1| hypothetical protein HMPREF0889_1681 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1681 [Megasphaera genomosp. type_1 str. 28L] # 1 180 1 180 180 355 100.0 8e-97 MDLTPLQKEYFKITVQDGYSIESSLGHHVLTCENGVYYLDGKRLTEDETAPVADLLQAVT ALQDQVLPPLPYRVLAIDIRRGARLGESKIKTMDGLQLYTSTRCEFIYDPRQHRFDNIWQ KESNELREELGETDLKKPYIAVQIDGVRKVDLSDVIGDIFPEAEAKALQAAHYWQDVTEE >gi|290781409|gb|ADGP01000019.1| GENE 134 146903 - 147307 567 134 aa, chain + ## HITS:1 COG:no KEGG:D11S_1226 NR:ns ## KEGG: D11S_1226 # Name: not_defined # Def: hypothetical protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 38 131 15 111 120 74 37.0 1e-12 MNLKKVLSVLAVTATISAPVVGSAWAATPTVDATARATTAAHAVIGEKTGLVFNESSFKV VKKVLQRGDVIPRHHHPGDTVLFTVVKGQMNVCINGKENYEVVPGKMLKFNGQNYIQAVA AADSIVFVTLIENK >gi|290781409|gb|ADGP01000019.1| GENE 135 147487 - 148503 1287 338 aa, chain + ## HITS:1 COG:BH3560 KEGG:ns NR:ns ## COG: BH3560 COG0057 # Protein_GI_number: 15616122 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Bacillus halodurans # 1 337 1 335 335 387 59.0 1e-107 MAVKIGISGFGRIGRCTFRTSLAHAEVEIAAVNNRSVGPIMADLLKFDTVHGTWDHDVSF DTDKQALVIDGRYIPVTNHTDPAAIPWRDNQVDIVVESTGKFRDRETAGKHLQGGAKKVI ITAPGKGVDKTIVMGVNEETYDPAHDQILSNASCTTNCLAPVAKVLSREFGIVRGMMTTV HSYTNDQQLVDGVHKDLRRARCATQSIIPTSTGAAKAVAAVLPELAGKFSGMALRVPTPN VSMTDLAAIVARPVTIEEVNRALKKWADGPLRGILAYTADPTVSSDYISDPHSAIVAALE TDVADRTMVKVVAWYDNEWGYSLRVNDLAAYIAAKGLA >gi|290781409|gb|ADGP01000019.1| GENE 136 148661 - 149686 1362 341 aa, chain + ## HITS:1 COG:BH3560 KEGG:ns NR:ns ## COG: BH3560 COG0057 # Protein_GI_number: 15616122 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Bacillus halodurans # 3 340 4 335 335 332 50.0 7e-91 MVKIGINGFGRIGRSVFKLAQSYADTIEIVAINDVGSPKQMAHLLKYDSIYGIFPPRVTY DERHILVDGKAYPLFQEKDCKQVDWSGLGAEIVLEASGQYAGRVAPSSQARLPLGGTVKK VIITSPSTIDDVTLVLGANEDTYDPAKHHVIAGASCTTCGLAAILHVLDETFGVQRGMTT SVHSYTTDQKILDVSHRDLRRARAAGMSIIPTTTGAAEAITKVLPQFAGKLKCHAVRVPT PDVSIIDLVAELRKKDITLAELNAAFVGAAAGKYAGIIDTNEDELVSVDYRGNEHTVTID LPLNMVMEEGLVKVVAWYDNEWGYARRMIDLIQFIAAKGLA >gi|290781409|gb|ADGP01000019.1| GENE 137 149717 - 150898 1436 393 aa, chain + ## HITS:1 COG:BS_pgk KEGG:ns NR:ns ## COG: BS_pgk COG0126 # Protein_GI_number: 16080446 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Bacillus subtilis # 2 392 3 393 394 399 53.0 1e-111 MKKTIRDLTLADKRVFIRADFNVPLDANGNITDDTRIQKTLPTIRYVLAQGGAVILASHL GRPKGEVQAKYSLKPVADRLSQLLGKPVQMAPDCIGAATEAMAHRLQGGEILLLENLRFH KEEEANDPQFSRALAVLAEVGVNDAFGCCHRAHASVAGITAFLPMAAGLLLAKEIQFIGG AVTQPAHPFAAIIGGAKVSDKIGVLANLLQKVEVLMIGGGMANTFLAAQGLEIGTSLVEI DKIPFAASLLHRAEQAGVQVLLPTDVVVAEAVDNTAAYDVVSVQRVPSRHMILDIGPQTC KTFAARLQGMKLIVWNGPMGVFELSHFSHGTTAVARAVAASEAVSIVGGGDSVAAVNQCG VAEHITHISTGGGASLAYLEGKDLPGIAALQDA >gi|290781409|gb|ADGP01000019.1| GENE 138 150916 - 151674 997 252 aa, chain + ## HITS:1 COG:FN1366 KEGG:ns NR:ns ## COG: FN1366 COG0149 # Protein_GI_number: 19704701 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Fusobacterium nucleatum # 1 250 1 251 251 231 46.0 9e-61 MRKKILAGNWKMNHTGAAVQTVLTELVQTLPETKATLIIAPPFPYLAQAVSLTVHTPLHI AAQTMHWEEHGAFTGEVSPAMLVDIGVTHVLIGHSERREYNGETDRTVQQKVAAALQHGL TPIICCGETAQQRQAGRTDDLLGTQLRMALAKVRMADASRVIVAYEPIWAIGTGQTATVA QAQATCAFLRRQLAALYNSDIAATVPILYGGSMKADNAAALLAAADIDGGLIGGASLQAA SFTAIIRAADTI >gi|290781409|gb|ADGP01000019.1| GENE 139 152088 - 156177 4757 1363 aa, chain + ## HITS:1 COG:mll2848 KEGG:ns NR:ns ## COG: mll2848 COG5295 # Protein_GI_number: 13472521 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Mesorhizobium loti # 141 689 232 802 1953 86 27.0 3e-16 MNKIYKVIWSKVKHCYVVVSELTKRDGKSASPTGLLGRKAAVLAVMALCGAGAVLPTMPV RAEYVIAVDQTTVGNNGFAMKWPGADEKLEEYLGSIGVGYPKDSKNMQMRFGLATGDTDY SDNKKTHDGIPVANEYKYRTALGRQFRNFGAGATSIGYFSKSVGTETTSLGYMAQTEEWL GTALGARTYSSGKGATAVGYHAVSINTQSTAIGNNAVAFDQATAVGNDTWALGKGSIAFG SDDTYLGSEYMDALPRPVIESVYKKVWAKDEPYHIFKDYLDPNNKDDYGQNAFNKAYTGA ASIYSPTYAGGTAAIAIGARAIAPGSGSTAVGVLAMAMGARSTAIGTRAYVSEGAAGGLS MGEESRVLQTNGISVGNHTYSGDQGSVSYGYNSKAVGSGAVAVGHQAVASAELNKDAATK LDALLQYRITKNHTQDIQTIMQSSKNDPEAALEKVNPKIATYNDASHIIRVKNVVKKDEK GNISWANPEHTVPNFNTSYEYMLKEKGKNAVSVGRNVWATGTGAVAVGSLSWAAGDNALA LGEMAYAKGDNSLVLGRSGIAAAKNSLAIGVNSTALGLSSTAMGVNTAATAEQSAAIGAN ASATASQSMALGVDAEADLANSIAIGVGSKTDYTEKDLTQDGWAPRNAITFPSSTQVGVV SVGSIGSERRISNVASGYRDTDAVNVSQLRSLEERFSNNLADDSDLNPFSYLAVDKTNGD VTKVIPLQKKELNYRKYINYRIKQIELQIKGKHQKIDKTFLDRINVVVDKLEKNTANKTG IDASGLKGKSAEVIIQELKKAYPELDTNDTNAVINKLNEWKKDKLKDSLKKALTEKEQGF LKETNYLNDGAKGKDAIAFGYKAQSLADNAVAIGKESRVDKEAQGAIALGAFSSGTRAGG QRAYDFDNERVFADDNAARQGIGGILANKSNIGALSIGSAKYTRQITNVAGGSEDTDAVN VAQLKRVFNMVKDELGFNFEPDWGGRPWVSVGRGKDKNNTLSFGIQGGIQNEAETVDGNI GVYGKSKTNTENNKNQYYIAKVQLAKNLKNLESATFTKTEKAVTTTSVINDKGLTIGTGN NAISLTNGGLAMGGQKITGLANGTQATDAVNLGQLQNVDNKVEGNIGFNIDGNTGAHGPW VSAGTKASQKGKISLKIRGGDNDSNINVDLGRVTNSGFDTIEAKINLNHNLQSLESATFT KDGRTSTLNQDGLTIGSGNTAVALTKDGLSMGSHQIHGVAAGKADTDAVNVAQVNKAIQA KADELKKNEIKTAQDTANTANTKADQVSKDLAAHKKVAVTYDDEQKKQITLGSGTEGTTI THVKAGALSKTSTDAVNGSQLFATNTNVTANTTNISNITKTLS Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:44:26 2011 Seq name: gi|290781207|gb|ADGP01000020.1| Megasphaera genomosp. type_1 str. 28L contig00013, whole genome shotgun sequence Length of sequence - 210091 bp Number of predicted genes - 205, with homology - 196 Number of transcription units - 67, operones - 40 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 114 - 317 212 ## gi|290968555|ref|ZP_06560093.1| conserved domain protein - Term 205 - 239 -0.4 3 2 Op 1 . - CDS 331 - 1185 830 ## SmuNN2025_0610 DNA polymerase III subunit alpha 4 2 Op 2 . - CDS 1176 - 2126 1034 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 5 2 Op 3 . - CDS 2123 - 2776 525 ## HMPREF0424_0764 CRISPR system CASCADE complex protein CasE 6 2 Op 4 . - CDS 2757 - 3509 580 ## SmuNN2025_0607 hypothetical protein 7 2 Op 5 . - CDS 3519 - 4604 674 ## HMPREF0424_0762 CRISPR system CASCADE complex protein CasC 8 2 Op 6 . - CDS 4591 - 5178 651 ## SmuNN2025_0605 hypothetical protein 9 2 Op 7 . - CDS 5193 - 6932 1293 ## HMPREF0424_0760 CRISPR system CASCADE complex protein CasA 10 2 Op 8 . - CDS 6937 - 9711 2235 ## COG1203 Predicted helicases - Prom 9783 - 9842 7.6 - Term 9887 - 9927 8.2 11 3 Op 1 1/0.182 - CDS 9963 - 10304 480 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 12 3 Op 2 5/0.091 - CDS 10304 - 11626 869 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 13 3 Op 3 9/0.091 - CDS 11630 - 12355 755 ## COG1385 Uncharacterized protein conserved in bacteria 14 3 Op 4 5/0.091 - CDS 12356 - 13237 502 ## PROTEIN SUPPORTED gi|121534803|ref|ZP_01666623.1| ribosomal protein L11 methyltransferase 15 3 Op 5 31/0.000 - CDS 13269 - 14486 1352 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 16 3 Op 6 29/0.000 - CDS 14513 - 16366 2424 ## COG0443 Molecular chaperone 17 3 Op 7 21/0.000 - CDS 16397 - 16969 815 ## COG0576 Molecular chaperone GrpE (heat shock protein) 18 3 Op 8 . - CDS 16984 - 18015 1198 ## COG1420 Transcriptional regulator of heat shock gene 19 3 Op 9 . - CDS 18100 - 18252 91 ## + Prom 18143 - 18202 13.7 20 4 Tu 1 . + CDS 18236 - 19519 1429 ## COG1362 Aspartyl aminopeptidase + Prom 19521 - 19580 11.4 21 5 Op 1 . + CDS 19714 - 20067 312 ## Tmath_0051 transcriptional regulator, XRE family 22 5 Op 2 . + CDS 20094 - 20762 706 ## COG1739 Uncharacterized conserved protein + Term 20946 - 20980 0.4 + Prom 20764 - 20823 8.1 23 6 Op 1 32/0.000 + CDS 21007 - 22050 1294 ## COG1135 ABC-type metal ion transport system, ATPase component 24 6 Op 2 . + CDS 22031 - 22684 1000 ## COG2011 ABC-type metal ion transport system, permease component + Term 22887 - 22942 14.0 + TRNA 22799 - 22887 76.9 # Ser CGA 0 0 - Term 22977 - 23019 5.2 25 7 Op 1 . - CDS 23034 - 23657 699 ## COG4684 Predicted membrane protein 26 7 Op 2 . - CDS 23685 - 23852 212 ## gi|290968578|ref|ZP_06560116.1| hypothetical protein HMPREF0889_0215 - Prom 23887 - 23946 2.0 - Term 23878 - 23935 6.3 27 7 Op 3 . - CDS 23949 - 25400 1626 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 25562 - 25621 5.8 + Prom 25510 - 25569 8.4 28 8 Op 1 . + CDS 25595 - 26476 754 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 26485 - 26544 2.5 29 8 Op 2 . + CDS 26609 - 27859 1744 ## COG0281 Malic enzyme + Term 27877 - 27922 12.1 - Term 27853 - 27922 23.2 30 9 Op 1 . - CDS 27951 - 28817 872 ## gi|290968582|ref|ZP_06560120.1| hypothetical protein HMPREF0889_0219 - Prom 28839 - 28898 4.9 - Term 28919 - 28971 -0.4 31 9 Op 2 . - CDS 28975 - 29961 1421 ## COG2855 Predicted membrane protein - Prom 30149 - 30208 8.2 + Prom 30038 - 30097 7.2 32 10 Op 1 1/0.182 + CDS 30131 - 31054 965 ## COG0583 Transcriptional regulator 33 10 Op 2 . + CDS 31112 - 32101 864 ## COG0582 Integrase 34 11 Tu 1 . - CDS 32272 - 32820 493 ## AOLE_01270 hypothetical protein - Prom 32893 - 32952 5.0 - Term 32957 - 33009 7.6 35 12 Op 1 12/0.091 - CDS 33046 - 33984 1134 ## COG3958 Transketolase, C-terminal subunit 36 12 Op 2 . - CDS 33984 - 34805 749 ## COG3959 Transketolase, N-terminal subunit - Prom 34964 - 35023 5.0 - Term 34983 - 35032 9.2 37 13 Op 1 7/0.091 - CDS 35040 - 35924 972 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 38 13 Op 2 . - CDS 35921 - 36469 610 ## COG1658 Small primase-like proteins (Toprim domain) 39 13 Op 3 . - CDS 36462 - 37718 1285 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance 40 13 Op 4 2/0.182 - CDS 37723 - 38667 1004 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 41 13 Op 5 1/0.182 - CDS 38660 - 39445 469 ## COG0500 SAM-dependent methyltransferases 42 13 Op 6 6/0.091 - CDS 39442 - 41340 1955 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 43 13 Op 7 1/0.182 - CDS 41337 - 43937 2806 ## COG0249 Mismatch repair ATPase (MutS family) 44 13 Op 8 . - CDS 43948 - 45276 585 ## PROTEIN SUPPORTED gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase - Prom 45313 - 45372 4.7 45 14 Op 1 . - CDS 45375 - 45926 727 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 46 14 Op 2 . - CDS 45979 - 46662 662 ## COG0805 Sec-independent protein secretion pathway component TatC 47 14 Op 3 . - CDS 46673 - 46900 414 ## gi|290968599|ref|ZP_06560137.1| twin arginine-targeting protein translocase, TatA/E family - Prom 47078 - 47137 6.5 - TRNA 46965 - 47049 79.5 # Leu CAA 0 0 - Term 47233 - 47283 15.2 48 15 Tu 1 . - CDS 47302 - 47991 847 ## COG0398 Uncharacterized conserved protein - Prom 48048 - 48107 6.8 49 16 Op 1 . - CDS 48113 - 49120 756 ## COG1275 Tellurite resistance protein and related permeases 50 16 Op 2 8/0.091 - CDS 49187 - 49975 667 ## COG0101 Pseudouridylate synthase 51 16 Op 3 34/0.000 - CDS 49972 - 50772 858 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 52 16 Op 4 15/0.000 - CDS 50762 - 51631 450 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 53 16 Op 5 . - CDS 51622 - 52455 648 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 52481 - 52540 12.5 54 17 Tu 1 . - CDS 52549 - 53097 491 ## gi|290968606|ref|ZP_06560144.1| conserved hypothetical protein - Prom 53140 - 53199 5.5 - Term 53224 - 53266 8.1 55 18 Op 1 12/0.091 - CDS 53284 - 53790 532 ## COG0602 Organic radical activating enzymes 56 18 Op 2 . - CDS 53802 - 55952 2362 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 56039 - 56098 6.5 - Term 56106 - 56143 5.5 57 19 Op 1 . - CDS 56188 - 56898 854 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 58 19 Op 2 . - CDS 56895 - 57263 176 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 59 19 Op 3 28/0.000 - CDS 57298 - 60342 3216 ## COG0419 ATPase involved in DNA repair 60 19 Op 4 . - CDS 60339 - 61487 1038 ## COG0420 DNA repair exonuclease - Term 61498 - 61537 4.4 61 19 Op 5 . - CDS 61552 - 61962 383 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 62031 - 62090 7.7 - TRNA 62227 - 62318 73.6 # Ser GGA 0 0 - TRNA 62359 - 62435 87.7 # Pro CGG 0 0 62 20 Tu 1 . - CDS 62480 - 63193 651 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 63275 - 63334 5.5 - Term 63304 - 63343 11.1 63 21 Tu 1 . - CDS 63361 - 64779 1584 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 64803 - 64862 1.7 + Prom 64641 - 64700 3.4 64 22 Tu 1 . + CDS 64825 - 65013 77 ## 65 23 Tu 1 . - CDS 65207 - 66007 1179 ## COG0345 Pyrroline-5-carboxylate reductase - Term 66037 - 66071 3.1 66 24 Op 1 . - CDS 66078 - 67334 1553 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 67362 - 67421 6.2 67 24 Op 2 . - CDS 67432 - 67533 100 ## - Prom 67652 - 67711 9.6 + Prom 67593 - 67652 16.3 68 25 Op 1 17/0.000 + CDS 67702 - 68661 649 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 69 25 Op 2 24/0.000 + CDS 68636 - 69352 194 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Prom 69600 - 69659 3.2 70 25 Op 3 . + CDS 69684 - 70094 331 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 70116 - 70157 13.4 - Term 70091 - 70156 1.7 71 26 Tu 1 . - CDS 70250 - 70405 235 ## gi|290968622|ref|ZP_06560160.1| hypothetical protein HMPREF0889_0262 - Prom 70528 - 70587 8.2 + Prom 70453 - 70512 8.9 72 27 Tu 1 . + CDS 70538 - 71722 1346 ## COG0477 Permeases of the major facilitator superfamily + Term 71841 - 71883 10.1 - Term 71829 - 71871 10.1 73 28 Op 1 . - CDS 71908 - 73098 1180 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 74 28 Op 2 . - CDS 73154 - 73570 538 ## CLJU_c11350 putative positive regulator of sigma E activity - Prom 73618 - 73677 10.1 - Term 73729 - 73779 15.5 75 29 Op 1 . - CDS 73786 - 75873 2589 ## COG2217 Cation transport ATPase 76 29 Op 2 . - CDS 75876 - 76529 721 ## Selsp_0561 hypothetical protein 77 29 Op 3 . - CDS 76532 - 76825 246 ## Selsp_0463 hypothetical protein - Term 76864 - 76902 5.2 78 29 Op 4 . - CDS 76915 - 77133 440 ## Selsp_0559 hypothetical protein - Term 77576 - 77633 14.6 79 30 Op 1 . - CDS 77795 - 78268 547 ## gi|290968630|ref|ZP_06560168.1| hypothetical protein HMPREF0889_0270 80 30 Op 2 . - CDS 78272 - 78892 486 ## COG3409 Putative peptidoglycan-binding domain-containing protein - Term 78901 - 78960 2.1 81 31 Op 1 . - CDS 78964 - 79689 373 ## HMPREF0424_0971 hypothetical protein 82 31 Op 2 . - CDS 79701 - 79997 318 ## gi|290968633|ref|ZP_06560171.1| hypothetical protein HMPREF0889_0273 83 31 Op 3 . - CDS 79987 - 80247 286 ## gi|290968634|ref|ZP_06560172.1| hypothetical protein HMPREF0889_0274 84 31 Op 4 . - CDS 80244 - 82097 992 ## gi|290968635|ref|ZP_06560173.1| hypothetical protein HMPREF0889_0275 85 31 Op 5 . - CDS 82139 - 83113 445 ## gi|290968636|ref|ZP_06560174.1| hypothetical protein HMPREF0889_0276 86 31 Op 6 . - CDS 83110 - 89556 3928 ## LHK_01554 hypothetical protein 87 31 Op 7 . - CDS 89568 - 92243 1196 ## gi|290968638|ref|ZP_06560176.1| transglycosylase SLT domain protein 88 31 Op 8 . - CDS 92256 - 92909 612 ## gi|290968639|ref|ZP_06560177.1| hypothetical protein HMPREF0889_0279 89 31 Op 9 . - CDS 92911 - 93363 359 ## gi|290968640|ref|ZP_06560178.1| hypothetical protein HMPREF0889_0280 90 31 Op 10 . - CDS 93363 - 96482 1332 ## E2348C_2746 hypothetical protein 91 31 Op 11 . - CDS 96485 - 97183 614 ## Desal_1440 hypothetical protein - Prom 97236 - 97295 4.3 - Term 97193 - 97240 11.1 92 32 Op 1 . - CDS 97402 - 97746 401 ## gi|290968643|ref|ZP_06560181.1| conserved domain protein 93 32 Op 2 . - CDS 97763 - 98752 1184 ## APECO1_4044 hypothetical protein 94 32 Op 3 . - CDS 98766 - 99470 950 ## gi|290968645|ref|ZP_06560183.1| hypothetical protein HMPREF0889_0285 95 32 Op 4 . - CDS 99474 - 99767 274 ## gi|290968646|ref|ZP_06560184.1| hypothetical protein HMPREF0889_0286 96 32 Op 5 . - CDS 99767 - 101500 1587 ## Desal_2347 hypothetical protein 97 32 Op 6 . - CDS 101504 - 101740 283 ## gi|290968648|ref|ZP_06560186.1| hypothetical protein HMPREF0889_0288 98 32 Op 7 . - CDS 101765 - 103228 1063 ## APECO1_4038 putative phage terminase, large subunit 99 32 Op 8 . - CDS 103218 - 103805 239 ## gi|290968650|ref|ZP_06560188.1| hypothetical protein HMPREF0889_0290 + Prom 104044 - 104103 12.1 100 33 Op 1 . + CDS 104138 - 104641 556 ## gi|290968651|ref|ZP_06560189.1| hypothetical protein HMPREF0889_0291 101 33 Op 2 . + CDS 104739 - 104813 85 ## 102 33 Op 3 . + CDS 104810 - 105859 810 ## Msip34_2882 domain of unknown function DUF1738 103 33 Op 4 . + CDS 105929 - 106510 450 ## gi|290968654|ref|ZP_06560192.1| hypothetical protein HMPREF0889_0294 104 33 Op 5 . + CDS 106530 - 106904 382 ## gi|290968655|ref|ZP_06560193.1| ribbon-helix-helix protein, CopG family 105 33 Op 6 . + CDS 106925 - 107350 563 ## gi|290968656|ref|ZP_06560194.1| hypothetical protein HMPREF0889_0296 106 33 Op 7 . + CDS 107360 - 107689 206 ## gi|290968657|ref|ZP_06560195.1| hypothetical protein HMPREF0889_0297 107 33 Op 8 . + CDS 107691 - 107981 287 ## gi|290968658|ref|ZP_06560196.1| hypothetical protein HMPREF0889_0299 + Term 107987 - 108013 -1.0 108 34 Tu 1 . - CDS 107967 - 108215 116 ## gi|290968659|ref|ZP_06560197.1| hypothetical protein HMPREF0889_0298 - Prom 108261 - 108320 2.8 109 35 Tu 1 . - CDS 108365 - 108790 333 ## COG4570 Holliday junction resolvase - Prom 108824 - 108883 3.9 - Term 108805 - 108855 3.5 110 36 Op 1 . - CDS 108885 - 109268 400 ## COG0629 Single-stranded DNA-binding protein 111 36 Op 2 . - CDS 109265 - 109636 312 ## gi|290968662|ref|ZP_06560200.1| hypothetical protein HMPREF0889_0302 112 36 Op 3 . - CDS 109626 - 110144 378 ## gi|290968663|ref|ZP_06560201.1| hypothetical protein HMPREF0889_0303 113 36 Op 4 . - CDS 110141 - 110587 186 ## gi|290968664|ref|ZP_06560202.1| hypothetical protein HMPREF0889_0304 114 36 Op 5 . - CDS 110676 - 111740 707 ## Clole_1479 hypothetical protein 115 36 Op 6 . - CDS 111733 - 112014 363 ## gi|290968666|ref|ZP_06560204.1| hypothetical protein HMPREF0889_0306 116 36 Op 7 . - CDS 112016 - 112288 173 ## gi|290968667|ref|ZP_06560205.1| HNH endonuclease domain protein 117 36 Op 8 . - CDS 112306 - 112797 368 ## gi|290968668|ref|ZP_06560206.1| conserved domain protein 118 36 Op 9 . - CDS 112788 - 113447 484 ## NT01CX_2192 essential recombination function protein 119 36 Op 10 . - CDS 113464 - 113952 451 ## NGO1128 putative phage associated protein 120 36 Op 11 . - CDS 113963 - 114259 510 ## MCCL_0956 hypothetical protein 121 36 Op 12 . - CDS 114260 - 114496 336 ## gi|290968672|ref|ZP_06560210.1| hypothetical protein HMPREF0889_0312 122 36 Op 13 . - CDS 114510 - 114722 238 ## gi|290968673|ref|ZP_06560211.1| hypothetical protein HMPREF0889_0313 123 36 Op 14 . - CDS 114737 - 115060 272 ## gi|290968674|ref|ZP_06560212.1| conserved domain protein 124 36 Op 15 . - CDS 115129 - 115452 359 ## 125 36 Op 16 . - CDS 115455 - 116144 103 ## LMHCC_1394 hypothetical protein 126 36 Op 17 . - CDS 116164 - 116481 175 ## 127 36 Op 18 . - CDS 116522 - 116722 213 ## gi|290968676|ref|ZP_06560214.1| toxin-antitoxin system, antitoxin component, Xre family - Prom 116796 - 116855 8.4 + Prom 116815 - 116874 6.1 128 37 Op 1 . + CDS 116903 - 117583 403 ## BL03621 phage-like protein 129 37 Op 2 . + CDS 117680 - 118753 381 ## COG0582 Integrase + Term 118759 - 118791 -0.1 - Term 118969 - 119016 11.3 130 38 Tu 1 . - CDS 119027 - 120718 1666 ## Vpar_1526 hypothetical protein - Prom 120748 - 120807 7.8 - Term 120889 - 120929 8.4 131 39 Op 1 . - CDS 120940 - 121941 514 ## gi|290968680|ref|ZP_06560218.1| putative lipoprotein 132 39 Op 2 . - CDS 121962 - 123113 869 ## gi|290968681|ref|ZP_06560219.1| conserved hypothetical protein - Prom 123147 - 123206 3.9 133 39 Op 3 . - CDS 123209 - 124186 887 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 124220 - 124279 4.2 - Term 124304 - 124357 15.3 134 40 Op 1 . - CDS 124376 - 125113 900 ## COG1073 Hydrolases of the alpha/beta superfamily 135 40 Op 2 . - CDS 125140 - 125571 169 ## gi|290968684|ref|ZP_06560222.1| hypothetical protein HMPREF0889_0324 136 40 Op 3 3/0.091 - CDS 125580 - 126614 1449 ## COG4864 Uncharacterized protein conserved in bacteria 137 40 Op 4 . - CDS 126634 - 127932 961 ## COG1030 Membrane-bound serine protease (ClpP class) 138 40 Op 5 . - CDS 127948 - 128361 506 ## gi|290968687|ref|ZP_06560225.1| conserved domain protein 139 40 Op 6 . - CDS 128445 - 129035 737 ## COG1896 Predicted hydrolases of HD superfamily 140 40 Op 7 . - CDS 129045 - 130034 1296 ## COG0180 Tryptophanyl-tRNA synthetase + Prom 130397 - 130456 9.7 141 41 Op 1 . + CDS 130494 - 131756 1472 ## COG0513 Superfamily II DNA and RNA helicases 142 41 Op 2 . + CDS 131767 - 132453 446 ## gi|290968691|ref|ZP_06560229.1| hypothetical protein HMPREF0889_0332 + Prom 132455 - 132514 6.2 143 42 Tu 1 . + CDS 132565 - 133152 673 ## PROTEIN SUPPORTED gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 + Term 133183 - 133234 13.1 - Term 133576 - 133615 9.1 144 43 Tu 1 . - CDS 133654 - 135258 2036 ## COG1620 L-lactate permease - Prom 135501 - 135560 10.4 145 44 Tu 1 . + CDS 135980 - 136630 473 ## COG3601 Predicted membrane protein + Term 136638 - 136675 1.2 - Term 136714 - 136771 11.3 146 45 Tu 1 . - CDS 136828 - 139626 3137 ## COG0060 Isoleucyl-tRNA synthetase - Prom 139867 - 139926 5.6 147 46 Tu 1 . - CDS 139935 - 141338 701 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 141446 - 141505 9.4 148 47 Tu 1 . + CDS 141773 - 142501 772 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 142587 - 142641 15.4 - Term 142582 - 142622 -0.2 149 48 Op 1 2/0.182 - CDS 142638 - 145010 2712 ## COG1193 Mismatch repair ATPase (MutS family) 150 48 Op 2 . - CDS 145023 - 147428 1883 ## COG0826 Collagenase and related proteases - Prom 147457 - 147516 9.8 - Term 147508 - 147544 5.1 151 49 Op 1 3/0.091 - CDS 147587 - 148054 643 ## COG3599 Cell division initiation protein 152 49 Op 2 14/0.000 - CDS 148066 - 148611 385 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 153 49 Op 3 . - CDS 148559 - 149131 275 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 154 49 Op 4 2/0.182 - CDS 149196 - 149813 815 ## COG0344 Predicted membrane protein 155 49 Op 5 3/0.091 - CDS 149810 - 151141 1800 ## COG1160 Predicted GTPases - Prom 151163 - 151222 1.8 - Term 151157 - 151197 10.6 156 50 Op 1 1/0.182 - CDS 151262 - 153169 1757 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 157 50 Op 2 3/0.091 - CDS 153166 - 153780 565 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 158 50 Op 3 1/0.182 - CDS 153777 - 154448 745 ## COG0283 Cytidylate kinase 159 50 Op 4 . - CDS 154445 - 155686 1204 ## COG2081 Predicted flavoproteins 160 50 Op 5 12/0.091 - CDS 155702 - 156418 1027 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 161 50 Op 6 21/0.000 - CDS 156390 - 157028 509 ## COG1386 Predicted transcriptional regulator containing the HTH domain 162 50 Op 7 . - CDS 156979 - 157710 674 ## COG1354 Uncharacterized conserved protein - Prom 157737 - 157796 6.3 - TRNA 157837 - 157925 76.7 # Leu TAA 0 0 + Prom 157678 - 157737 6.6 163 51 Tu 1 . + CDS 157941 - 158204 144 ## + Term 158325 - 158365 -0.9 - TRNA 157942 - 158015 74.5 # Cys GCA 0 0 - TRNA 158019 - 158093 88.2 # Gly GCC 0 0 164 52 Tu 1 . - CDS 158073 - 158312 166 ## - Prom 158395 - 158454 5.1 - TRNA 158102 - 158177 89.8 # Phe GAA 0 0 - TRNA 158183 - 158259 68.5 # Asp GTC 0 0 - Term 158399 - 158443 11.2 165 53 Tu 1 . - CDS 158457 - 159992 2424 ## COG1418 Predicted HD superfamily hydrolase - Prom 160124 - 160183 6.9 - Term 160013 - 160041 -0.1 166 54 Op 1 . - CDS 160214 - 160633 391 ## Vpar_1198 regulatory protein RecX 167 54 Op 2 5/0.091 - CDS 160630 - 161676 1514 ## COG0468 RecA/RadA recombinase 168 54 Op 3 . - CDS 161689 - 162942 300 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 169 54 Op 4 . - CDS 162959 - 164290 817 ## PROTEIN SUPPORTED gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase 170 54 Op 5 . - CDS 164291 - 165289 856 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 165321 - 165380 3.2 171 55 Op 1 . - CDS 165394 - 165771 189 ## COG1426 Uncharacterized protein conserved in bacteria 172 55 Op 2 . - CDS 165850 - 168312 2390 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 173 55 Op 3 . - CDS 168330 - 169649 1334 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Term 169978 - 170043 12.0 174 56 Tu 1 . - CDS 170054 - 172054 2301 ## COG0021 Transketolase - Prom 172084 - 172143 6.5 - Term 172130 - 172171 5.2 175 57 Op 1 . - CDS 172173 - 173075 937 ## COG1560 Lauroyl/myristoyl acyltransferase 176 57 Op 2 . - CDS 173087 - 174106 1236 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 177 57 Op 3 . - CDS 174119 - 174538 616 ## gi|290968727|ref|ZP_06560265.1| outer membrane protein 178 57 Op 4 . - CDS 174554 - 175438 1020 ## gi|290968728|ref|ZP_06560266.1| outer membrane protein 179 57 Op 5 . - CDS 175484 - 175969 788 ## Vpar_0528 outer membrane chaperone Skp (OmpH) 180 57 Op 6 . - CDS 175985 - 177259 1305 ## Selsp_1802 hypothetical protein 181 57 Op 7 . - CDS 177266 - 179323 1990 ## COG4775 Outer membrane protein/protective antigen OMA87 182 57 Op 8 . - CDS 179336 - 179893 464 ## gi|290968732|ref|ZP_06560270.1| hypothetical protein HMPREF0889_0380 - Prom 179935 - 179994 8.7 183 58 Op 1 . - CDS 180009 - 180662 907 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 184 58 Op 2 . - CDS 180678 - 184973 3543 ## Vpar_0526 protein of unknown function DUF490 - Prom 184995 - 185054 3.8 - Term 184992 - 185040 9.4 185 59 Op 1 . - CDS 185102 - 186577 1790 ## COG1538 Outer membrane protein 186 59 Op 2 13/0.091 - CDS 186611 - 187846 1515 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 187 59 Op 3 23/0.000 - CDS 187830 - 188594 340 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 188 59 Op 4 . - CDS 188603 - 189364 1087 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component - Prom 189442 - 189501 4.5 - Term 189469 - 189528 15.2 189 60 Op 1 . - CDS 189529 - 191484 2256 ## Vpar_0521 hypothetical protein 190 60 Op 2 . - CDS 191497 - 191790 407 ## gi|290968740|ref|ZP_06560278.1| hypothetical protein HMPREF0889_0388 191 60 Op 3 1/0.182 - CDS 191802 - 192734 1294 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 192756 - 192815 2.1 192 61 Op 1 . - CDS 192856 - 194127 1654 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 194154 - 194213 2.2 193 61 Op 2 . - CDS 194218 - 194376 58 ## gi|290968743|ref|ZP_06560281.1| hypothetical protein HMPREF0889_0391 194 61 Op 3 . - CDS 194373 - 194954 691 ## PP_4450 phosphoglycerate mutase family protein - Term 194973 - 195019 6.4 195 61 Op 4 . - CDS 195027 - 198560 3466 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 198608 - 198667 6.8 - Term 198710 - 198750 9.0 196 62 Op 1 . - CDS 198772 - 199938 1308 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 197 62 Op 2 . - CDS 199965 - 200792 1054 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 198 62 Op 3 . - CDS 200805 - 202808 2115 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 199 62 Op 4 . - CDS 202819 - 204159 1514 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 204189 - 204248 5.3 + Prom 204148 - 204207 5.9 200 63 Op 1 1/0.182 + CDS 204353 - 204880 521 ## COG2109 ATP:corrinoid adenosyltransferase 201 63 Op 2 . + CDS 204891 - 206102 1063 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 206109 - 206150 2.3 - TRNA 206186 - 206262 98.8 # Ile GAT 0 0 - Term 206143 - 206177 4.5 202 64 Tu 1 . - CDS 206365 - 206484 192 ## gi|290968752|ref|ZP_06560290.1| hypothetical protein HMPREF0889_0401 - Prom 206666 - 206725 4.4 - Term 206759 - 206795 3.2 203 65 Tu 1 . - CDS 206798 - 207019 385 ## gi|290968753|ref|ZP_06560291.1| hypothetical protein HMPREF0889_0402 - Prom 207083 - 207142 4.7 204 66 Tu 1 . - CDS 207254 - 208096 684 ## HTH_0879 hypothetical protein - Prom 208186 - 208245 7.6 - TRNA 208263 - 208338 92.2 # Val TAC 0 0 - TRNA 208343 - 208418 71.7 # Glu TTC 0 0 - TRNA 208420 - 208495 89.7 # Asn GTT 0 0 + Prom 208784 - 208843 8.3 205 67 Tu 1 . + CDS 209085 - 209774 466 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 209795 - 209842 6.1 Predicted protein(s) >gi|290781207|gb|ADGP01000020.1| GENE 1 2 - 211 99 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RTAAANSDLPLTRDHPRVCGKNPSALLSRLSYQGSPPRVREEPCFLPHFDHASGDHPRVC GKNHTHCQD >gi|290781207|gb|ADGP01000020.1| GENE 2 114 - 317 212 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968555|ref|ZP_06560093.1| ## NR: gi|290968555|ref|ZP_06560093.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 14 67 1 54 54 94 100.0 2e-18 MCGKNHASCHILTMRPGITPACAGRTIRIAKIESSTKDHPRVCGKNGITGKGYELARGSP PRVREEQ >gi|290781207|gb|ADGP01000020.1| GENE 3 331 - 1185 830 284 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0610 NR:ns ## KEGG: SmuNN2025_0610 # Name: not_defined # Def: DNA polymerase III subunit alpha # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 282 1 300 300 184 37.0 3e-45 MPLTVMTLKKVPGSLRGDLTKWMQEIATGVYIGNFNSKVREKLWERVKANVKDGEATMSY AYRNEIGYRFETWKTSQKVIDVDGIPFVYIPLQEQEPTHSLKAGFSKAAMFHQVRKFQGK IPVGHKNLVFIVADCRFQEKEAKELHIQEIEALIIKWQPERKAFVCGEQWKEKVGAENKE GDVWKKFLRFTKKEPIVVYDDGQLMNYMKQEEKARRETIIRTMYSLEKYVKREKVLMDYS LKNVCKAYGIGDKTEQRSKTKVEILSELATKVNGFMKRLEKEKA >gi|290781207|gb|ADGP01000020.1| GENE 4 1176 - 2126 1034 316 aa, chain - ## HITS:1 COG:ygbT KEGG:ns NR:ns ## COG: ygbT COG1518 # Protein_GI_number: 16130662 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Escherichia coli K12 # 12 284 6 276 305 194 38.0 2e-49 MNDIAGAKKTALHELPRISDRVTFIYIEHAKINRSDSAITVSDSRGIAKIPAAMIGVLLL GPGTDISHRAVELIGDTGTAMVWVGERGVRQYAHGRALNHSTRFLEKQAQLVSNTRTRLQ VAKRMYQMRFPGEDISRLTMQQLRGREGARIRRMYREQSKLHHVEWDHREYKVDDFSSGT VINQALSAAHVALYGLVHSVLVALGLSPGLGFVHTGHDLSFVYDIADLYKAAITIPIAFE VAEKYTETDDIGRITRQKTRDAFVDGKLIQRIIKDLQILLEIEEKDKIESDSMALWDDKE KSVAYGINYSGDNACP >gi|290781207|gb|ADGP01000020.1| GENE 5 2123 - 2776 525 217 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0764 NR:ns ## KEGG: HMPREF0424_0764 # Name: casE # Def: CRISPR system CASCADE complex protein CasE # Organism: G.vaginalis # Pathway: not_defined # 2 217 3 215 215 238 55.0 2e-61 MYLSRVKVDDENFRKVRALNSLDAFHDWVERCFPEEFEAQKRKRKLWRLDTLQGDRYLLI VSETMPDIAGMEVYGVPGSGAIKEYDAFLQRLKENQRMRFRVTLNPVTAKADRTEGKRGR IFPHVTVAQQMKFLYDRAVKNGFSLVPDEFTIVERGYGILQKNRNIEHRRPIRLSKAVYE GLLTITDAVRFRQVLVAGFGKKKAYGFGMMTVIPVQS >gi|290781207|gb|ADGP01000020.1| GENE 6 2757 - 3509 580 250 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0607 NR:ns ## KEGG: SmuNN2025_0607 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 242 1 237 238 244 50.0 2e-63 MKTILLKLAGPLQSWGTRANFEIRHTDYYPSKSAVLGLLLGAMGIRREDTSETIDVFNAL DFAIRVEQPGELLKDYHIARSYESNGSLLQTYVTERYYLEDAVFLAALGSENGAVIAEIE HALKYPHFQPFMGRRSCPVPADFFLGVFEEGVIEILKTYPWQAASWFKKKQRHDPKYHTF VYADSHLLKQAVRKRRKDKVASFSQKNRQFQYRFESELSVMLENPLYQGSTKDEHDALAA IGGEYVSIQS >gi|290781207|gb|ADGP01000020.1| GENE 7 3519 - 4604 674 361 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0762 NR:ns ## KEGG: HMPREF0424_0762 # Name: casC # Def: CRISPR system CASCADE complex protein CasC # Organism: G.vaginalis # Pathway: not_defined # 4 359 3 361 362 381 56.0 1e-104 MKTNNLYLDIHAIQSVPPSNLNRDDTGSPKTAKYGGATRARVSSQCWKKAIREYFCKYVE KGDLGKRTQYIVKCVADKITEKFPECEKNATKFATAVLKNAGLKIDKDGKSNVLFFMGDK QVSELAELAIRGTKEQEKICKALNANMAIDIALFGRMVAREKTQKYDLSVDASCQVAHAI STHAVSGEYDYFTAIDDLSPEDNAGAGMIGTIEYNSSTLYRYANIAVHELCHQLGNKEAA ISAVTLFIEAFIKSMPTGKANTFANQTLPQGIIVTLRSDRPVNLVSAFEEPVQAKGGYAK ESMAKLAVEYKKAAKIVQPEIASFVLTLDEDSPLAAVGKQEKNLDALLHDVGGTIEQTLM V >gi|290781207|gb|ADGP01000020.1| GENE 8 4591 - 5178 651 195 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0605 NR:ns ## KEGG: SmuNN2025_0605 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 21 194 3 181 183 181 51.0 1e-44 MADTKSKPTVFSVVKEIVTILENTIETSAGKAALAKLRHSTGQPLSRMVDVLPMIFEKMP EEFLGFRGEVTKEERAILITIQLYAWHQQGAHDRVNTNEKYKNMGAALRSMRRGEATVVV DRRFNALITSQDFEELIYHLRQMIRLLKSRTKEKINYPQLSEDLYWFLRGQKEKLRISWA QEYYKQKGDDTDENE >gi|290781207|gb|ADGP01000020.1| GENE 9 5193 - 6932 1293 579 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0760 NR:ns ## KEGG: HMPREF0424_0760 # Name: casA # Def: CRISPR system CASCADE complex protein CasA # Organism: G.vaginalis # Pathway: not_defined # 1 576 1 552 556 495 46.0 1e-138 MGRYNLLDEPWIMVMTEDGENKKVSLKAVFQHAHTYRSLAGDMATQDFAVMRVLLAVLHT VFSRVNAAGETYKYLTLDARYVPQNEIEEDDADDYGEELFETWEILWRTGRFPEIVATYL EAWRDRFYLFDETYPFYQVTKESIAPDKINKAPAGIICGKNINRLISESKNKVALFSPKY EGENNKEILNADEIARWLITFQGYTGVMDKTVFRTEKYTTSKGWLFDLGGIYLSGENLFQ TLWLNCMLWHTEESYRIERQCPCWEYTGEELVANYLQGKTVKNSAALYTNWSRAIYIPED TDTHKPFALQAVKLPEIEHKEQFLEPMTLWQFNQSKSNKNCFTPRKHKEHEVLWRSFGLL TLSYRNDTGKGKIEARRKPEIMAWLDRIKSDLGDKDIRFSAVSMKDDGKSFSWVPTDEIC DELQLSYEVIADAYWIPRINDAVEETKEVIELIYGDFLSEVKDIRGFVENQKEKQKEKQK EKQIEKEKQKMYFMVDDPFRRWLSQLTVDAGKEAALKEWRETLKGIVETGAKKIWQTAGP RDYIGIDSGKDSKTGSAKGIKNIATAYRDFRIRLYKKLQ >gi|290781207|gb|ADGP01000020.1| GENE 10 6937 - 9711 2235 924 aa, chain - ## HITS:1 COG:ZygcB KEGG:ns NR:ns ## COG: ZygcB COG1203 # Protein_GI_number: 15803278 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli O157:H7 EDL933 # 143 729 157 755 899 193 30.0 1e-48 MKEEKKRHCLWAKKNECKGLLKWLPLWQHLTDAWFVMGFLWDTWVCDGQKEELRNACGQL SREKIKLVLQFIAYIHDIGKATPVFQTMKGYGNSSDLDTALLEKMERGGFTGISALTLHE RIHHTQTGQVILLHLGVREDIASIVGGHHGKPLDEDWKDDDISYSAQYYQVEDEYNLIYQ KWQEVQQEIVTTALAKSGFDCVEALPEITQPGAVLIEGLVMMADWIASNERYFPLISIEE EGCMTDDEERAQTGCEKWKQEWQSHNWSPQEIPIENIYRTRFGFAPREEQKKFSEAVAAV ENPGMFIFEAPMGLGKTEAALVAVEQLAYKKKQGGLFFGLPTQATSNSMFDRVLHWLEAV AKEEDSLLGIRLQHGKAALNETFQHLSSSMDPDGGGSVVVNQWFGGRKTTALDDFVVGTV DQCLLLALKQKHLAFRHLGFSKKVVVIDEVHAYDAYMSQYLYRALTWLGAYHVPVVILSA TLPKERRKKLIKAYMKGCGYKEKDFIMRTAAWDTEAYPLVTCTDGQQVKMMKDFPKKENT EIHLEKTAQPIIELLPPAAKGQGIIGIIVNTVKKAQEIAEECVNVYGEDCVALLHSRFIA TERIKKEKQLSAMIGKGGVRPDFKIIIGTQVMEQSLDIDFDMLITELAPMDLLLQRIGRL HRHEKVKRPEIYKKPKVYVVGCSDTLDFDKGSTFVYHPYILTRTQYFLPNQVHIPADISP LVQRVYGEDNIEVSAHVKGMYEDMKIKWQIITENKENKAGTYRIEPPVLEKKKTQRSSLI GWLENSNQAANESEERAYMQVRDIQETIEIIALQKVGSGYGFFHERKDISKDIENPETAK RVAMETLSLPAILSNPNNVDETIKLLENQNRKELSLWQEQLWLKGALGIIFDEKGEAVIQ GIKLKYDSVYGLQYEKVQDGTERM >gi|290781207|gb|ADGP01000020.1| GENE 11 9963 - 10304 480 113 aa, chain - ## HITS:1 COG:CAC1287 KEGG:ns NR:ns ## COG: CAC1287 COG0537 # Protein_GI_number: 15894569 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Clostridium acetobutylicum # 1 111 1 112 114 147 61.0 6e-36 MDDCIFCKIVKGEIPSTKVYEDEQFYAFKDIAPVAPVHVLIIPKKHIAGIASLTEADRPI AANMLFVIQKVAAQLGLTDGFRVVFNTGEKAGQTVHHMHAHLLGGKEMAWPGV >gi|290781207|gb|ADGP01000020.1| GENE 12 10304 - 11626 869 440 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 425 1 424 451 339 41 6e-92 MSTIAFATLGCRVNQYDTDSMRGLFAAAGFRTALFTETADVYVINTCSVTQMGEKKSRQL IRRAKKQNPHSVVVVTGCYAQLSPDVLAAMEGVDAVVGTNEKKKIVTIVQTLLQAPSGHA LTAIHDIRHSPDEFEEIPLYPAAVTHTRADLKIQEGCNNFCTYCIIPYTRGKLKSRRPDA IVEEAKRLVEAGFKELVLTGIHLGAYGKELAEKPTLAHILRRLVEETDVLRLRLGSIDSL EVDDDLIRIINEAEQRICPHLHIPIQAGSDTILKAMNRQYTKQEYIGLLTHLQQHIPNIT FSTDLILGFPGETEALFEETMETLRQLPYSHIHAFPFSPRQGTPAATMAGQVSPVERKRR VEAVNALSAAQKQQVQQSFLGKTVHVLIEQVQAGLASGFCENYERVSIQEAPAIKVGDMV AVKVIGRRDKELLALKEENK >gi|290781207|gb|ADGP01000020.1| GENE 13 11630 - 12355 755 241 aa, chain - ## HITS:1 COG:SA1406 KEGG:ns NR:ns ## COG: SA1406 COG1385 # Protein_GI_number: 15927157 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 20 239 23 246 250 135 36.0 9e-32 MRKIFTDFPLEARFELNGADARHVLVVLRHGVGDRIAVTDSTGTTYACRIDSIAGHSAVL TVEERLSCRTQETGKVVLAAGLLKNDKFEWLIQKATELGVHTIIPVQMEHCVVKLNDNHR SGKFERWRRIAVEAAKQCGRDDVPIIREVMPFTELFQAYGTSRFVIPYERETTSLAEVCH EVQQGDVVLCIGPEGGFSPKEIAYAVSQAAWCRTVSLGKRILRAETAALASLSILMYERG F >gi|290781207|gb|ADGP01000020.1| GENE 14 12356 - 13237 502 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121534803|ref|ZP_01666623.1| ribosomal protein L11 methyltransferase [Thermosinus carboxydivorans Nor1] # 1 291 1 309 312 197 36 2e-49 MQWKEVNIAVAPRATDAVALLLYECGSNGAVIHDEETDECGRIRITAYFPSQPHIEKEIN NKLQVLATGENLSLAIAWQPQVADETEWLYTWQQYFHATDVTRRCRIIPAWEVNTAEKNE INIIVDPGRAFGSGLHETTAMCIRLLEKYVRSEQQVWDIGTGTGILAIAAAKYGAAAVKA VDIDEASVQQAVKNVQRNDVAAQVQVERGDLLQNLTPPKNGVDLVVANLVTDPVVRLLAG VHRFIKKGGHLIVSGIIDTRIEEVYAAVKRYGFIVREEKKSNGWYALYLQQEE >gi|290781207|gb|ADGP01000020.1| GENE 15 13269 - 14486 1352 405 aa, chain - ## HITS:1 COG:lin1509 KEGG:ns NR:ns ## COG: lin1509 COG0484 # Protein_GI_number: 16800577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Listeria innocua # 1 381 1 364 376 314 52.0 2e-85 MSKRDYYEVLGVPKTANEAEIKKAFRKLAIQYHPDKNRDNPKAAEEKFKEINEAYSVLSD KTKRAQYDQFGPEAFQNGNAAGAGGFGQGGFGGFGGFGGFSQGGGFGGFEDIFDNFFGGQ GNRQYRNGPQRGSDLRFDIEVSFEQAVFGTEMEIQVPKEDRCERCGGSGAEPGTTAETCP QCHGSGQEQVTHNTPFGTMVNMRTCSHCGGTGKFIKKKCVKCRGTGTVKVRKKIKVKIPA GVDTGARLRVSGEGEPGKRGGSYGDLYVYIFVRKSAEFVRDGNDIISNETISFTQAALGA SIRVRTLDGTVDLKIPAGTQNNTVFRIRDKGVPVLGSRNRRGDHHVRVQIAVPKKLTPKQ KELLQAFAAACGESTTEESAATPENKARTDARTEKEKIKKDFGVS >gi|290781207|gb|ADGP01000020.1| GENE 16 14513 - 16366 2424 617 aa, chain - ## HITS:1 COG:CAC1282 KEGG:ns NR:ns ## COG: CAC1282 COG0443 # Protein_GI_number: 15894564 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Clostridium acetobutylicum # 1 616 1 615 615 744 69.0 0 MSKVIGIDLGTTNSVVAVMEGGEPTVITNAEGSRLTPSVVGFSKTGERLVGQLAKRQAVS NPENTIASIKRHMGEDYKVDVNGKKYTPQEISAMVLQKLKEDAEGYLGEKVTQAVITVPA YFSDSQRQATKDAGKIAGLDVLRIVNEPTAAALAYGLDKGGDGKILVFDLGGGTFDVSIL ELGEGVFEVKATNGNTHLGGDDFDNAVMNWMIQEFKSQTGIDLSQDKMAEQRLKEAAEKA KIELSTVMSTNINLPFITADASGPKHMDLTLTRAKFNELTEELVHATMEPTRKAIADSGL SIDEIDKIILVGGSSRIPAVQEAIKSILGKEPSKGVNPDECVAIGAAIQAGVLVGDVKDV LLLDVTPLSLGIETLGGVFTKIIDRNTTIPTSGSQVFSTAADNQPSVDIHVLQGEREMAA DNKSLGRFELTGIPAAPRGVPKIEVTFNIDANGIVNVTAKDLGTGKEQKITITSKTNLDQ SEIDRMVKEAAAHEAEDKKRKAGIEAKNNADTLIYQAEKTLKELGDKADAAKTDAIKEKI AALKEAMNSGDVDKIKAASEELTKPLYELSGEMYKDAAARQEAEQAQQQSAEKPEKEGAG DEKVVDADYTVVDDDKK >gi|290781207|gb|ADGP01000020.1| GENE 17 16397 - 16969 815 190 aa, chain - ## HITS:1 COG:BS_grpE KEGG:ns NR:ns ## COG: BS_grpE COG0576 # Protein_GI_number: 16079602 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Bacillus subtilis # 1 186 1 185 187 94 37.0 9e-20 MSEEEKGRTREEAESVTEDTNIASPEEKREEATAAPDGQGTAEAAAAAAEEHQRYVRLQA DFANFKKRTNVEKLQLSELVKTEVLIRILPIMDNFERALQSPRETMSEEMQSFVAGYEMI YKQLREVLEKEGVTKMEAVGKPFDPQYHQAVTRVASDAYENDTVAEVLQEGYLLGDKTLR PAMVKVVFNG >gi|290781207|gb|ADGP01000020.1| GENE 18 16984 - 18015 1198 343 aa, chain - ## HITS:1 COG:BH1344 KEGG:ns NR:ns ## COG: BH1344 COG1420 # Protein_GI_number: 15613907 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Bacillus halodurans # 3 336 2 336 343 235 38.0 7e-62 MTLNERKKRILQAIIQDYITSAEPVGSRTIARKYDLGVGAATIRNEMFDLEMLGFLEQPH TSAGRIPSVKGYRFYVDCLLEPTAVAPAERKMVEEWFHHKVSGVDQIFQSMAKVLAQMTH NAIFVMASQQVQAKLKYVRFLPLDDRRAIMIVVTDSGHIENCLFDRPEGVSLDELNHIAE RLTCCLAGKALGQMDVDFLNRFRETVVDDLELYRTAFQTLHRAFQREHQVYKGGTLELFD KPEFKDVHKAKNLVTLLEEQEVVSGLFGNDGQDKVTVRIGDEIKLQPITDCSIIEATFTA GNAVVGKIAVLGPTRMEYARIIGLLHFMQQHIKQILEHYEDKP >gi|290781207|gb|ADGP01000020.1| GENE 19 18100 - 18252 91 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAISFMKIIPFFLYITECIYYSIGKTEIHDKIKFDFLTKKPIFGLKSIDK >gi|290781207|gb|ADGP01000020.1| GENE 20 18236 - 19519 1429 427 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 3 416 6 425 433 335 37.0 9e-92 MNEIATGLLSFIHTSTSPFHTVRTGAAMLAAAGFCELSLHEPWTLTRGGAYYIRFFDSTL LAFTLGDHPRDHLRIAAAHTDFPALRIKPQATLHTPDYDTLNVEIYGGLMRESWLDRPLS FAGKVVLQGEQVFTPQVQLIDYKKPVFIIPRLAIHLNRKVNDGLPLNPQKDMLPLLSLSD EKPSSFTDFLAAYMQIEPSRLLAYDLTVYPCEEGCLLGMHQELLSAPRLDNLTSAYACLM GMIDSHPADGLNMIALFDNEEVGSRTKQGAASQALPRILHSIYRTLQYTEEEYRCDMADA FLLSVDVAHALHPNIPEKCDPSHRPVMGNGPALKTACSQAYVGDAEALGMIKGLCRKYQI PHQHFVNRNDVPGGSTLGSILSAGLSVRGLDVGIPILAMHSARETMGIADQERLQQLLTC YFQDRNQ >gi|290781207|gb|ADGP01000020.1| GENE 21 19714 - 20067 312 117 aa, chain + ## HITS:1 COG:no KEGG:Tmath_0051 NR:ns ## KEGG: Tmath_0051 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: T.mathranii # Pathway: not_defined # 3 116 2 125 129 64 35.0 1e-09 MTLGQEIKFYRKKKGLTQTEFGAVFGMSKQAVYSWETGLYAPDISVLLKMADFFQIPICM LVGRPGVYCRDQEAAADHSDCTFVSKKDSRILQALHYLSPEEQQAIEILLHIHEKQS >gi|290781207|gb|ADGP01000020.1| GENE 22 20094 - 20762 706 222 aa, chain + ## HITS:1 COG:SP2209 KEGG:ns NR:ns ## COG: SP2209 COG1739 # Protein_GI_number: 15902016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 6 211 3 208 211 149 38.0 5e-36 MPLPLYRSLHGQAIAEHTVKKSRFIATAAHITSPAEGQALLQRCRQRYHDARHHCSAYCL GIHQPLQKANDDGEPSGTAGHPMLAVLQNHALTDTGVVVTRYFGGIKLGTAGLIRAYSRA VTLVLATAAIAEYYEREIITITASYPYINSLERFADTHALTIVHRNFAEMVTFTLQLPVQ EAARLRQQLTELTAGTAHVHCQGIRTVPVIVPPSGVLQETSE >gi|290781207|gb|ADGP01000020.1| GENE 23 21007 - 22050 1294 347 aa, chain + ## HITS:1 COG:VC0907 KEGG:ns NR:ns ## COG: VC0907 COG1135 # Protein_GI_number: 15640923 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Vibrio cholerae # 1 343 1 343 344 360 54.0 2e-99 MIQLENITKTYSGKAKVNALKGISLTIEDGEIFGIIGKSGAGKSTLVRCINMLEKPTEGK VIIDDKDLTLLSEAQLREERKHIGMIFQHFNLLSSRTVFDNIAFPLELAGASKEAIQKKV SDLLELVQLTDRKYNYPAQLSGGQKQRVGIARALAGDPKILLCDEATSALDPQTTKSILE LLQDINKRLGITIVLITHEMSVIKDICHRVAVIEGGVIKESGRVVDVFSNPQSETMQEFV KSIINTELPAGLKKLGVSNQPAPDRAMLVRLRFKGSLTGDPLVASVVRKFNINVSVLYGN IDYIQNERFGYLVIIILGDMQKQAEAYSYIKTLPVKSEVLGYVPGNH >gi|290781207|gb|ADGP01000020.1| GENE 24 22031 - 22684 1000 217 aa, chain + ## HITS:1 COG:RSc0921 KEGG:ns NR:ns ## COG: RSc0921 COG2011 # Protein_GI_number: 17545640 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Ralstonia solanacearum # 1 213 1 213 217 184 54.0 1e-46 MSPEIIDLMLQGIQETLIMVCVSTVIAAIIGIPLGITLVTSSKGHILQNAVVHQILSAIV NIIRSIPFIILMVAIIPFTRIVAGTSIGTTAACVPLTIVAVPFLSRLVETSIRDVDFGLV EAAESMGASPFQIIRKVLLPEALPTIINNITVLIVNLIGASAMAGAIGGGGLGDIAIRYG YQRFEGDVMLVTIIILIIGVNLIQAVGDFASRKKNKK >gi|290781207|gb|ADGP01000020.1| GENE 25 23034 - 23657 699 207 aa, chain - ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 14 204 4 192 192 162 48.0 3e-40 MNKELDASAVGQGRTLFTTRELTIVGMLAGITVLLGVTGYGFIPLPMMKATILHVPVIIG ALLAGPRVGAAVGFLFGCFSIFQAITSPVVLSFAFLNPLISILPRVLIAVGAYYLYIGLR KVIRKDTFCLAVAAFAGSAINTIGVMGGIYILYARHFAEIRHIPVHHVADLILGICAMNG IPEAIVSALITVPIVTVLHHTLQKKHS >gi|290781207|gb|ADGP01000020.1| GENE 26 23685 - 23852 212 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968578|ref|ZP_06560116.1| ## NR: gi|290968578|ref|ZP_06560116.1| hypothetical protein HMPREF0889_0215 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0215 [Megasphaera genomosp. type_1 str. 28L] # 1 55 1 55 55 92 100.0 7e-18 MFFFSLFYVKSIGNTFMVWYNSRNITQKHVHTVGPYHGTGPYEQGEYVKKYDLYL >gi|290781207|gb|ADGP01000020.1| GENE 27 23949 - 25400 1626 483 aa, chain - ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 5 481 16 489 489 457 48.0 1e-128 MYTKALVTDLYQLTMMQGLFFEGKHEQRCVFDRFYRKNPFQNGYTVIAGLNHVIDYVKRL RFGADDLQYLRHTGFFKEEFLRYLQDFSFTGDIYAMPEGTVAFPQEVLLRVHAKKSEAIL LETCLSMILNHESLIATKARRIRTVAGNDTLMEFGLRRAQGKSAGVHGARAAMIGGFNGT SNVLAGAMFHMPVLGTMAHSWIMSFASELEAFRAYVRQYPNNLILLVDTYNTLKQGVPNA IKIFTELRQKNCLPAVYGIRLDSGDLAYLSKEARKQLQAAGFSDAIIAASNDLDENLIAE LKAQGSEINSWGVGTHLITAKDSPSLGGVFKLVGQYEDGQFVPKIKMSDNVEKISNPGIK NVLRIYDKETGKMKADVITLAGEEIDSTKDYELTSDKAPWRFRLLKGGTYHVKSLLQPIF KEGRAVYTTPPLQDIISYAEEQIQSLWPEYRRLVNPEEMWVQRSKKLSALREELLEKESM KFF >gi|290781207|gb|ADGP01000020.1| GENE 28 25595 - 26476 754 293 aa, chain + ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 1 283 6 286 303 182 39.0 7e-46 MKYRFMLLITAIVWGGGFVAQRLGAECIGPFTFNCFRYGIGALCLVPLLLSQKQTSSPAV PKGLSLINACSLLSVLLFAGSGLQQIGLAYTTAGKAGFITSLYIVTVPLLGLFFKHPLRL SHVIGCAVALWGLYLLAFHGGTSEPLNKGDMMQLAGVLFWSCHILTVSRFVPHFSGIHLA AGQFLGCCLINALALWIHGETLSLSSLTAAAPALAYSGILAGGVGFTLQILGQKKVPPTE ASLLCSLEMIFGALGGVLFLGEWMTCVEWLGCLFMTIGIFAAQTGGRTVYRPR >gi|290781207|gb|ADGP01000020.1| GENE 29 26609 - 27859 1744 416 aa, chain + ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 1 397 1 398 409 416 53.0 1e-116 MTFYEQAMKVRTEKNGILEVLPRVTVKTRDDLSILYTPGVAEPCREIAKNPDASFDLTGR GNTIAVISDGTRVLGLGDIGATAAMPVMEGKALLFKLFGGVNAIPLCIDTKDPEIFINTV KLLAPSFAGINLEDISSPKCYEIETRLKAEMDIPVFHDDQHGTAIVALAGVLGACRLTGR DIRTAHIVMNGAGAAGASISRLLLREGAEHVLVVDKMGILHKDLKGMNPIQAELAARTNP ENRQGTLETAVKNADILLGASGPGLFTPDLLRMMNDNAIVFSLANPIPEISYTDAKEAGA AVVGTGRSDAPNQINNVMVFPGIFRGALAVRASAINEEMKLAAAHAIADLVSAEELKDTY VIPDSFDPRVAPAVAAAVAREAMKSGLARKQRDPEDIRQEVACDLQTLHQRLDQQQ >gi|290781207|gb|ADGP01000020.1| GENE 30 27951 - 28817 872 288 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968582|ref|ZP_06560120.1| ## NR: gi|290968582|ref|ZP_06560120.1| hypothetical protein HMPREF0889_0219 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0219 [Megasphaera genomosp. type_1 str. 28L] # 1 288 1 288 288 559 100.0 1e-157 MKQDSLQTLQEEIRVLKALRAEKREIIQIIYDFLQARIGREYSAGDFHAVEMELRKIVQT RTRGQWEITGNLSKNGLTIERTTEPKVHIELLSVQKAIEITPDEYHFVIKRGRGGSCKIN GKELEFFIGTALLSDANELAGDDLFSSDRKLMDIVETQAQYMDRYNRLYEKYGNVYTTLA GYDVIRKLSLGDPVHSHEIGSLNGDMEREIPSSYGCTPEEYTYRMFTAEQLGDFEELSYS REELDRIIQEERQAVRQLEQYFAAVPADVRTALCRCGVLKKTVPAPDV >gi|290781207|gb|ADGP01000020.1| GENE 31 28975 - 29961 1421 328 aa, chain - ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 20 327 22 338 339 241 46.0 1e-63 MSVSKIKGMLFTLVFAVPAYLLGWKFPIVGGPVFGILLGMIFAAVHRPEVLEEGISYTGK KVLQYSIVLLGFEMNLMHVLHTGAHSFSVMVFTLATAFIVAFIFGKLLKLQFNTTTLIGV GTAICGGSAIAAVAPIIKATERDVAYSISTIFLFNIIAVFLFPFLGHLMHMTDACFGMWA GTAINDTSSVVAAGYSYSAVAGGLATITKLTRALMIVPVCIIIAFIVAKRQNTDNAFSLR AVFPNFILYFVIASIISTVGYHVIPHSVLHFLGEAGKFFIVMAMTAIGLRTHLLGLIRNG LRPIILGLLCWFGVASVSLIVQHCIGLL >gi|290781207|gb|ADGP01000020.1| GENE 32 30131 - 31054 965 307 aa, chain + ## HITS:1 COG:PA3398 KEGG:ns NR:ns ## COG: PA3398 COG0583 # Protein_GI_number: 15598594 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 6 295 4 293 308 149 30.0 1e-35 MKKNITLRHFTIFICVCEENNMTHAARRLHMTQPSVSQVIQEIEGLYGTRLFERLGRSLH ITSAGKRLLQYAYQIVSLTKQIEATMTSFQTTIPLRIGASVSIGEFCLIEYLHFLHTYRK QAPIFSEIHNTTELESMLLCDKLDFALLEGAIRSEYIITLPFMEDELIIAVPPQHPLVKK GRIQLSDLRNFPMFLREEGSGTRNLFTHIMEEHHIPFQICGVYNNTESLKKAVLAGLGGT VLSRHLVRKEWENGELGILYIENDLFHRHFKIAYHKDKFLFPALQDALTICRDYTRWFPG TFFTARS >gi|290781207|gb|ADGP01000020.1| GENE 33 31112 - 32101 864 329 aa, chain + ## HITS:1 COG:mlr9649 KEGG:ns NR:ns ## COG: mlr9649 COG0582 # Protein_GI_number: 13488493 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 21 303 42 341 365 122 32.0 9e-28 MTQDRNKHFYLGKTVAIADNEKLTAKARQSLYTARAEHTITAYRSDWNDFCDWCEYHDVP FFPAAAETIVNYINDLADHAKANTVARRISALTENFDAAGLPENPCRMPLVKNAVRGIKR MKGTAQQGKLPILFDDIKEMLTYLEGNTLQRARDKAILLVGFYGAMRRSEIANLDVGDIR FTRLGMLLTLRKSKTDPFDRGQMIAIPYVADPQICAVRALKEWLQESGITGGPLFRGFTK THSLRTNRISDKTVALLVKQYVARMGMDPRDYGAHSLRHGFATSAAQHHVEERQIMRQTR HKSQTVVRRYIDEADRLIDNPIFKITEQK >gi|290781207|gb|ADGP01000020.1| GENE 34 32272 - 32820 493 182 aa, chain - ## HITS:1 COG:no KEGG:AOLE_01270 NR:ns ## KEGG: AOLE_01270 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 41 175 8 127 182 67 35.0 2e-10 MEKEVKKTHHTNPFEIGFAGAEDAYHQNPPCKGFNPRTYYEPWRDDSLTERFFSPRGRLG RLSFFIRSLVGWIVLLIWGSIMTNRLLDSFTNGMTGMIFHTVRTFSTVSYCEITLLFAIF IGFCAMQGMFVIRRLHDRDKSGRYCILLYLPYIGILFWLYLLFAKGTKGDNQYGPDPLTH LQ >gi|290781207|gb|ADGP01000020.1| GENE 35 33046 - 33984 1134 312 aa, chain - ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 1 308 1 308 309 285 45.0 1e-76 MEKVPMRDGYGRALLELCKQHEEVIVLDADVATSTRTDWVRRQYADRYVNVGISEQDLVG TAAGMAAAGLSPFVSTYGVFLTGRAWEQIRNTVCYNRLNVKLGGAHAGISVGPDGGTHQA LEDVALMRTIPNMTIVVPCDYWETYKATLALYAVKGPSYLRFGRNPVAVITNEHTPFTLG KVACLREGTDVTLFANGIMVATCLQVAAQLAAQGIEATVVNVHTVKPLDEEGICRYAAQT GAVVVCEEHQQIGGLGSAVCETLSRRCCTPVETVGIQDCFGSSGNPEELVQAYHLGEADV YRAVQKVLSRKK >gi|290781207|gb|ADGP01000020.1| GENE 36 33984 - 34805 749 273 aa, chain - ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 5 268 7 269 270 271 49.0 9e-73 MSKQLQELCRQVRKDTVQSIYLAGSGHPGSSLSAVEIMVTLYFTDVFRCNPAQPQDPLRD RFILSKGHAAPAYYSVLAHKGFFPRESLHTLRKLGSALQGHPNMEKLPCLDMAVGSLGQG LSIANGMAWALKRQQSTSYVFCLIGDGEQQEGQIWEAAMFAAQHKLDNVCLIVDVNGLQL VDAVAGIKNMNAAATQWQSFGWHATCVDGHSIPALYEAFRQAEERRGKPSVILANTVKGK GVSYMENQAEWHGTAPNERQYKSAMRELTREER >gi|290781207|gb|ADGP01000020.1| GENE 37 35040 - 35924 972 294 aa, chain - ## HITS:1 COG:BS_ksgA KEGG:ns NR:ns ## COG: BS_ksgA COG0030 # Protein_GI_number: 16077110 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Bacillus subtilis # 5 283 4 291 292 239 45.0 5e-63 MKEVDLANPEVVRYIVRRFGLHMNKKLGQNFLIRHEAVAAIAEAAALTPGEQVLEIGPGI GTLTQALAETGAAVRAVEVDAGLLPILAKTLAHYDNVQVIHGDIMRVSIPDIMEHKPFTV CANLPYYITTPIIMQLLEQRLPIRRLVFMVQKEVAQRMVAAPGSKVYGALSVAVQYYTQA ELLFEIPPQAFMPAPEVTSAVVALQVRTEPPVKVQEEARFFKVVKAAFAQRRKVFRNALQ GAGISKETVTRMLREAQIDGERRGETLDLQEFAAVAEAWTKTLQEGAAFSEKEK >gi|290781207|gb|ADGP01000020.1| GENE 38 35921 - 36469 610 182 aa, chain - ## HITS:1 COG:BH0056 KEGG:ns NR:ns ## COG: BH0056 COG1658 # Protein_GI_number: 15612619 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Bacillus halodurans # 2 179 3 181 185 140 44.0 1e-33 MLKEVLVVEGRADAARIRASHIEADMITTDGFSLRPDTLQKIQCAYEKRGIIILTDPDSA GERIRQYLAQRFPKAKHAFIPRQEAIANHDLGVEQASAASIVRALEKNRGTEMAVSETFT MQDIWDAGCNGTATAATRREALGALLGIGYGNAKQFLQRLNHYGVTRQEWQAALAQLGEN NG >gi|290781207|gb|ADGP01000020.1| GENE 39 36462 - 37718 1285 418 aa, chain - ## HITS:1 COG:SA1148 KEGG:ns NR:ns ## COG: SA1148 COG4100 # Protein_GI_number: 15926890 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Staphylococcus aureus N315 # 17 404 16 402 412 389 47.0 1e-108 MPIDFETLRQQAMEACAEQFEYIDRVALKNTEKVLQAYKECRVSAFQFAGTSGYGYSDLG REKLDEVYARVFRAEKALVRPHFVSGTHTLATVLCALLAKGERLVSLAGAPYDTMQGVIG YARHTPRSLKEKGVLYEEVPLRDNRYDLEAIARAMTEYKPKVALIQRSRGYSARKSLTPA DIRKIVEVVKTCSPQTICFVDNCYGEFTAREEPLEAGADIIAGSLIKNAGGGLAPTGGYI AGKKEWVEAAADYLTAPGLGDELGSYAAGYRLFFQGFFMAPHVTAQAIKGAVFAATVFER LGFTVSPSPQERRADLIQTVYLQNEENMCLFCRGIQSSSPVDAHVAPIPDAMPGYADKII MAAGDFVQGSSIELSADGPIREPYVIYLQGGIVFEHNVLAVLQAAQYILAAREAGGHA >gi|290781207|gb|ADGP01000020.1| GENE 40 37723 - 38667 1004 314 aa, chain - ## HITS:1 COG:SA1144 KEGG:ns NR:ns ## COG: SA1144 COG0324 # Protein_GI_number: 15926886 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Staphylococcus aureus N315 # 4 307 8 307 311 205 37.0 9e-53 MDKVIAIVGPTAVGKTALSLALAKKLQAPLISGDAYQIYRHMNIGTAKPSAAELAGHRHY LIDIAEPGEPYSAALFCAQAKELIRRINAGGKIPVLVGGTGLYVQSLLEGYDFSAPSVTT AQRAQARQRIASLGETALRKYIIRETAWEPADWHELLANTNRLVRLVAAIEHGEGKKFVR AGKANGLVYDAYVIGLSLPRFILYQRIEQRIDRMIAAGWQQEAAYLLRCGYGTENQAMKA IGYEELAACIQGTLSLSQAIANIKTRTRRFAKRQWTWYRRMPYIHWFDKTAFASETSLVQ TVWREVTAFFCRKE >gi|290781207|gb|ADGP01000020.1| GENE 41 38660 - 39445 469 261 aa, chain - ## HITS:1 COG:TM0524 KEGG:ns NR:ns ## COG: TM0524 COG0500 # Protein_GI_number: 15643290 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Thermotoga maritima # 4 244 5 245 254 90 28.0 2e-18 MSPIVTTSVNAGETIVKAAQKWAIRTNHTFILRNKRSLSALATDYGYPLLVYTAQGPELI TPTGRHFFSLQMAQLRIQRLRRQEPDYLLTAVGLKQAGRVLDCTCGLGADAAILSFGLPA GSEVQAWEKSPELAAITAWGFQHYVHQQADVTAALRRISLKVADYTEALERIREPFDVIY FDPMFTGPIMTSSNFQPLRSLLPRTTLSPSIIQQALKKCARVVIKERAFHTARENAFSGT KIGGKYSRIQYVILKGEWKHG >gi|290781207|gb|ADGP01000020.1| GENE 42 39442 - 41340 1955 632 aa, chain - ## HITS:1 COG:BH2368 KEGG:ns NR:ns ## COG: BH2368 COG0323 # Protein_GI_number: 15614931 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Bacillus halodurans # 5 631 4 635 637 391 37.0 1e-108 MSTVIAVLDEATRNKIAAGEVVERPASCIKELVENSIDAGATMIEVEIADGGQSYMRVTD DGCGMGPEDARICIVRHATSKIRTVEDIFSITSLGFRGEAVPSIAAVSHFQITTRRKEDE FASHLVLQAGEIITQEQVGAPAGTTMEVSDLFFNTPARRKFLKSTRTETAKISEMLTKLS LAHPAIGFTFINNGRTTLQTGGSGSLQETVADIYGAEVAKEVFPLGASETEEIGVSGFVG RPSILKSSRMWQTCVVNHRIVYNPMLFKAIDNAYHAMLPKAGYPFALLHIQLDPAALDVN VHPAKTEIKFADEKAVYRAVYHAIVGALVAQEEPERIARPIAADSRQLQHREEAAADFVR TQEPERVWEPTALTLPEIPEERRSAGYAAHRGSALQASAPVASVRERRENPYTAAPGTER DFSVALHAGEATTRPDAQIHFEEETDFVPLGAVADCYIIAKKGRDLYIIDQHAAHERVRY DRFCRQMENVPSQQLLTPEFVEADETDMVLLTEQRELFRKLGYTYSEAGPTTIRIEEVPA DLPGGEIKESLQTICRGLRENKHWDKATIRHRALAYMACRGAIKAGDKITIREMQKLLED LFRTEKPFVCPHGRPVIIRFTAAELAKLFKRT >gi|290781207|gb|ADGP01000020.1| GENE 43 41337 - 43937 2806 866 aa, chain - ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 5 861 1 868 869 700 42.0 0 MAEAIKLTPMMKQYMEVKERCRDKILFFRLGDFYEMFFEDALTVSRELDLTLTGRAGGNK EKVPMCGVPFHSADTYIERLVQKGYKVAVCEQMEDPKAAKGIVKREIIKVITPGTITMEH AVAAKQNNYLACMTASAASVSFVLADVTTGECWWQVCDTDGWESIVGDMVSVYAPRELLL GSLTAAQKDGIRKILQQREGNCVLTEPDIRTDVDYEAVGTQYFTVEMMAAAKAASYCLGL LLSYVTEVMKCDISYFHTLEPLQQEQRLVLDAACLHHLEITRNVRDGGRKGTLLAVLDHT CTAMGGRLLRKWLETPLLSGTQIMRRQEGVAELVQHSVLRKDVTDILEKIYDFERILTRI ETGTVSPKDYVALRESLGVLPTLKQALQQVTSPILRDLIAAVHTHDEVYDLLCRSIKEVP GQVIRNGGVIREGFSSELDEIRRIGANSKEFLQELEAKERERTGIKMKIGYTKVFGYYFE ISHANTKPVPEYYIRKQTLVNAERYITPALKEFEVKVLTAQERMLALEYALYGEVRQRIQ THIHDMQETARALAQLDCLHSLAVAAQENRYIRPQLNGERQIRIVDGRHPIMEHYVKNAL FVPNDVVLNHDTHEILIITGPNMAGKSTYMRQVAVLVLMTQIGSFIPAREASICPVDRIF TRIGATDDILTGQSTFMMEMEEVSHILQYATQNSLLILDEIGRGTSTFDGMSIARAVIEY CLKKVHALTLFATHYHELTDMSTMSKKIKNYTVAVKERGRDITFLRRIIPGGADRSYGLH VARLAGLPEGLLKRAEVILQELETAEHRPCQVSPSEKRDTVGAEGLFANPVLTRLLEVDI NGLTPIEAISFLYALQKEAKEGSGVG >gi|290781207|gb|ADGP01000020.1| GENE 44 43948 - 45276 585 442 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase [Spirosoma linguale DSM 74] # 11 441 13 435 437 229 32 5e-59 MDVLGNKFAYIATYGCQMNSSDSERYAGQLEALGYRLTEEMDVADVILLNTCCVRETAEG KTLGKIGELKHYKERNPELVIAVTGCMAQEWQERLFERAPHIDLVIGTHNIHKLTALLQE RQGKSGHALAADMSLPAFHDLPTKRFHKFFAWVPIMNGCNKFCTYCIVPHVRGREVSRPV AEIVREVAQLGKDGYKEVTLLGQNVNSYGLDLRDGTDFGTLVEALETVPGVERIRYMTSH PKDMTPAMIDAIAAGSRVVHHLHLPIQSGSNAMLKRMNRGYTVEHYLDLIAYARKKMSDL VLTTDLIVGFPGETEAMFQETLQLIRQVGYDMAYTFIYSPRTGTPAATWPDQVAAAEKSR RLQCLMDIQNETSLALNREMEGRSYEVIVEGPTKNDARHWFGRTRGNKMIIWEEDGSVQI GDTADVMVDKGQTWVLKGHVIH >gi|290781207|gb|ADGP01000020.1| GENE 45 45375 - 45926 727 183 aa, chain - ## HITS:1 COG:FN2073 KEGG:ns NR:ns ## COG: FN2073 COG0503 # Protein_GI_number: 19705363 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 6 180 4 177 177 179 58.0 2e-45 MKKRWYELTVAGCTRRLPILNISDTSAIAAFVILGDVELTRRAARELSLKVPQQAAYIMT AETKGIPLAAALAECMGHSRYIVARKSVKAYMEDPIWVEDQSITTQGKQRLYLSSADVET ISGKRVLLVDDVISTGGSMRALAELAQKAGAVSVGQAAILAEGKAAQRKDIIFLETLPLF SPL >gi|290781207|gb|ADGP01000020.1| GENE 46 45979 - 46662 662 227 aa, chain - ## HITS:1 COG:STM3975 KEGG:ns NR:ns ## COG: STM3975 COG0805 # Protein_GI_number: 16767245 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Salmonella typhimurium LT2 # 2 227 8 239 259 145 41.0 6e-35 MPVSGHLQELRRRLAVSAAVIAGGAVAAYGYMGDLLHILAAPVGELYFFSPTEVFFTYLE LAVIVSVIGTLPFLIYQVWAFFAPALTPPVRRIAKRLLPFSVLLFYSGLAFAYVLVLPTA VRFLLSFSGSSVQSMLSLSAYISFVISFVLPFGLAFELPLVILLLAAMGIVTEQGLCKKR RYMIVGAFIFGGVVSPTTDMFTQTMIAVPMILLYEISIFSVRILFGK >gi|290781207|gb|ADGP01000020.1| GENE 47 46673 - 46900 414 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968599|ref|ZP_06560137.1| ## NR: gi|290968599|ref|ZP_06560137.1| twin arginine-targeting protein translocase, TatA/E family [Megasphaera genomosp. type_1 str. 28L] twin arginine-targeting protein translocase, TatA/E family [Megasphaera genomosp. type_1 str. 28L] # 1 75 1 75 75 114 100.0 2e-24 MGMSELILVGIVALLVFGPKKLPEISRSLGKCVREFRQAMEETETVEVEIRKEHPALPRK PAELTAKEDEHDGKQ >gi|290781207|gb|ADGP01000020.1| GENE 48 47302 - 47991 847 229 aa, chain - ## HITS:1 COG:ydjZ KEGG:ns NR:ns ## COG: ydjZ COG0398 # Protein_GI_number: 16129706 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 15 189 17 196 235 66 29.0 5e-11 MTDKNLSRLLKSGSILLIILMIAAVQLCLPGFFAEMGRLVIQGDLDGLAYYIASFGYAAV IVSMVMIALVNAVGFPSILFLTVNGIIFGLVPGIIISWIGEVIGIEISFRLTRTLFHKQA QKLLARSHVLEKFDSHSCLRTMMIGRAIPYSPNMFVTAFGALSNISYRDQFIANFLGKLP AVIIEVWLGHDLLRIQEHWQRLLGLILLLAIIYGFIWFRKHLEKKHKMF >gi|290781207|gb|ADGP01000020.1| GENE 49 48113 - 49120 756 335 aa, chain - ## HITS:1 COG:MJ0576 KEGG:ns NR:ns ## COG: MJ0576 COG1275 # Protein_GI_number: 15668756 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Methanococcus jannaschii # 28 284 18 296 347 60 22.0 5e-09 MTKHIEVIQRGERDRIRNIGFVHFMSISTFSASMGYCGLCFGWRLAHDIWGVPAGIGEGF GAFALLLYVLIFIRYFQKWKRDADAVLAEWNSPTKVNFFGTFNVSTVLLAAVLSPYNHAL ASFFWYAGMLLIMIFSWVLLKHWLYDDQVVESVTPAWLLAVLGPITIPVAGNMLQNPGFH DISIFCVAIGLVTGIPVIALLFTHSIFSKHMPDAVQPSLMILMAPFGMGYITYTATFQPD TFTELFINAGIFMFWPVVLKIVHVMRHSRFCMGWWACSFPTMAFANGVLHYSIDHAALWT KTLAGALLIFGTGLILYLSIKTLWAVYHKTLWKLY >gi|290781207|gb|ADGP01000020.1| GENE 50 49187 - 49975 667 262 aa, chain - ## HITS:1 COG:CAC3099 KEGG:ns NR:ns ## COG: CAC3099 COG0101 # Protein_GI_number: 15896350 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Clostridium acetobutylicum # 3 245 2 244 244 181 37.0 1e-45 MKKNICLIVAYDGTDFHGFQRQTNASSIQQYIEEALTRIFQEPITVYGAARTDAGVHARG QVVNFYASGSIPVDKIPYAMKAYLPPTIAVLQAREMASHFSVRHDNCGKHYCYRIVNRAV PDPFQLRYSWFIRKPLDVEAMRQGANILLGTHDFSAFEGKNTTPMNPIKTMYAVQIQKNR DNVEIHVIGDGFLYHMVRNMAGGLADIGLHRFTTIHFRRILKGLDRKKLGATAPAGGLCL EEVFYTEARRRCVVRDITGVSM >gi|290781207|gb|ADGP01000020.1| GENE 51 49972 - 50772 858 266 aa, chain - ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 249 1 251 267 281 54.0 1e-75 MLTDITLGQFFPGNSLLHRLDPRAKIIGTMLFIIAIFLANSLATYAIVAIFVMGNFIISR LPVKLILKSLKPLWVIIVFTMGIHVFTTPGQSLWQWGFLHITREGVTQGALMTARLVFLI VFSSLLTYTTSPIVLTDGIEHLLNPFKRFGVPAHELAMMMTIALRFIPTLLEETERIMKA QTARGANFTSGNILQRGKNMIPLLVPLFVSAFRRADDLAIAMEARCYRGGTGRTRLHELE YTAKDGAALGVIIVITVILAGVRWCL >gi|290781207|gb|ADGP01000020.1| GENE 52 50762 - 51631 450 289 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 22 272 146 390 398 177 39 2e-43 MSIKLEAVTYTYGIGSPFEKKALYPLDLEIKEGDFIGIIGHTGSGKSTLVQLLNGLIQPT GGRVVIDGTDISQKQEAARKAKRKVGMVFQYPEYQLFEETIAEDIAFGPKNMGLTGLALQ ARVKEAMMFVGMDYEQYKDRSPFRLSGGQMRRVAIAGVIAMAPKYLILDEPSAGLDPVGR REIFAQIRALHQEKGVTVILISHNMEDIAAMANRLLVLKQGNVILDGNPLDIFSSQRSLL QGAGVAVPPITELLHYLKHRGLVVGERVHTVEEGARLIYEAWKEKQHAH >gi|290781207|gb|ADGP01000020.1| GENE 53 51622 - 52455 648 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 20 277 141 398 398 254 51 3e-66 MSEPMITLEHLSHAYEDENGTCVYAVKDISLTIGAGEFIAIIGTNGSGKSTLAKHLNGLL LPTSGRCIINGKATSDMKNIWAIRQEVGMVFQHPDNQIVASIVEEDVAFGPENLGVPSEE IQERVKQSLARVGMTSFAKHGPHLLSGGQKQRVAIAGILAMHSQCIVLDEPTAMLDPEGR REVMETLLQLHAEGITIVLITHFMEEAVQADRVVVIQEGVLAEEGTPHTVFSQAERLRNM GLDVPVAAEVADWLRRRQVHVPSQVITKEELGDILCP >gi|290781207|gb|ADGP01000020.1| GENE 54 52549 - 53097 491 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968606|ref|ZP_06560144.1| ## NR: gi|290968606|ref|ZP_06560144.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 12 182 12 182 182 291 100.0 2e-77 MKEKKKIRLKKRSEQEIKLRRGFELPARAGNGTVSFTSIGDLRAKYFRTEGRLARRPFIL RTLVLMAAQVLYSLILYSRFVESLLIGRQDLAILFFIIFIILSIPVVVAEFSLGVRRCHD LNIQGAAFIIPLFFYLSLYILPLVKNVLLWNVFLAAAAVMYLCLFTVNKKDKDNIYGEDR EV >gi|290781207|gb|ADGP01000020.1| GENE 55 53284 - 53790 532 168 aa, chain - ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 160 1 164 168 162 43.0 4e-40 MRYGQIRQFDVANGPGIRTSVFVTGCTHHCVNCFNEEYQDFSAGTEWTEKETQQVITYMQ SPSVSGLTLLGGEPMQNTAGLTALVKRVRQCIPDKTIWIYSGFTYERILRDRDKKELLSL CDVLVDGPFIDALRDPGLFFRGSANQRIIRIRDSLQRGTITLLWPDGR >gi|290781207|gb|ADGP01000020.1| GENE 56 53802 - 55952 2362 716 aa, chain - ## HITS:1 COG:VCA0511 KEGG:ns NR:ns ## COG: VCA0511 COG1328 # Protein_GI_number: 15601271 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Vibrio cholerae # 4 716 5 706 706 527 40.0 1e-149 MLEVIKRNGTRVVFDRNKIVVAIEKAMNSSSGVYEPGQAEKIAEEIEHYAVSLRKDMTIY GIEDKVYEFLLKYNNPATARAYENYKAIQAFKRQTNTTDSDVFGLLDNTNLDVLNENSNK NGHVVSTQRDLIAGEVSKDIARRKLIPADIVQAHDSGAIHFHDMDYIIQPMFNCCLINLE DMLKNGTVINGKKIDTPKSFQVACTVTTQIIAQVASGQYGGQSINGIDRILAPYVRKSFE KYMAAVVEEQREVYGIEPDTKKAEEIAWKRTKKEIKDGIQTVQYQINTLMTTNGQAPFVT LFMYFKPEYAYAKEAAMITEELLRQRIKGIKNEADVYVTPAFPKLIYVLDTHNVTADSPY FYLTELAAECTAKRMYPDYISAKKMKEIYEGNVFSPMGCRSFLSPWKDEDGNYKFDGRFN MGVVSLNLPQIGILADGDEEKFFQILEKRLELCKKALLLRVELLKRITSDVSPIHWQYGA IARLKPGETIEQFIYGGYATLSLGYIGMYEATLLTKHCSHTTPEGKAFALKVMEVFDDHI KKWKAETGIGFALYGTPAENLTNRFCKIDRARFGDIPDVTDKGYYTNSYHVDVREPINVF DKFLFEAEFQKKSTGGCISYAEIPNMTHNVSAVLSMIQFIYDNISYAEFNTKLDYCHACG FDGEIIVNEDNEWECPRCHNTDRTKLTVIRRTCGYLGENFWNEGRTKEIKNRVLHI >gi|290781207|gb|ADGP01000020.1| GENE 57 56188 - 56898 854 236 aa, chain - ## HITS:1 COG:CAC0908 KEGG:ns NR:ns ## COG: CAC0908 COG1179 # Protein_GI_number: 15894195 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Clostridium acetobutylicum # 1 234 1 250 251 216 46.0 4e-56 MNPLYTQRTERLIGREKVALLAERAVLLFGAGGVGSFAAEALVRAGIGKLIMMDADCFDP SNINRQLGATTATIGKKKVDVMKERLLTINPDLQIETYAEFYLPETHAGFIAASGVNYVV EAVDTVRAKIAVIEEAYIHHIPVISSMGAGNKLHPELFEVTTIEKTSVDPLAKILRKELK KRNIHGVKVVYSKEKPCAVGRASTEAHPSPGSISFVPAAVGMIMGGVVIRDLAELA >gi|290781207|gb|ADGP01000020.1| GENE 58 56895 - 57263 176 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 6 119 6 125 126 72 38 1e-11 MDFVFLHTNFNVLDLSRSLAFYEEALGLQEVRRIEKDAFTIVYLGDGKTSFCLELTWLKG RTEPYNLGENEFHTAFSVRDFAGALAKHKKMGCVVYENSEMGIYFIADPDGYWLEIIPEV RA >gi|290781207|gb|ADGP01000020.1| GENE 59 57298 - 60342 3216 1014 aa, chain - ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 1011 1 1018 1023 312 28.0 2e-84 MMPLYLEMQAFGPYAEKQVIDFRKLGTRRLFLICGPTGAGKTTVLDAMCYALYGDTSGNR RSGTHMRSEYAAPTLATKVSFSFAVGTKYYRIERSPEQEIAKIRGTGLKKAAAAVAFYET DGQGKDTAVLATKNVNAKVEEILGFKSDQFRQVVLLPQGDFRRLLLANSTERQQIMQVLF HTQRYARFQELAKERYDALQQEYQTLEEQNAQALAMVSVATPEELTEYIRQGKDKCRVIT EAIAAKKKEINRIQVQLTQAKRLDEHFKILDNARKEEEKLAAQAESMELRKKNIERIEQA QRLTDACNYLQDIIERGKQAARAGEEADRQVKEAEKQAAKAVHTYQQWVDKKDLYRQYEE RSVQLQLWLPKAAGYESLCREVEIVRQEARDREEAIEKEAATLTQYKERLQAAQRAVQEA AAIKLALQQQKVKIIRLQEEAQKAQLRESLRTRIQTQQAAADAIKEQLQAAKQAAADATC TYERAHCLFIQGQASILAKTLTDGTPCPVCGATAHPQPALPTAWIPAEEEVEDKKQAAHT AQQQWQDCKLAYEKACGTLESLQTQYTEAPMPENDEKTSAQWQQEIQDGELLGKQWEKSL RQQEIQAKEAPQWETCVAEQEKKVQDCRQQQVQWATKVSRKETEKQQMEAEIPASYRLTN KITSEIHTLQTKQAEYEENLRHAEERKNEAARSVEGAKGRAKERREQYKYLQDVYKKEEP EVRQRVQAAGFADIAACKVWQQKQVDLKKEKECLQQYTDRRQEIIGIIKQEQTMIQGKSR PDPEIQQKQYDAGENDLHVLIKQQAEYKQQVQQAEEIYQKIAARHKRQQELMDQYKVVGG LYELISGKQTGINFERYVLGALLDEVLRAANLRLQTMSRQRYELQRSVHWEDKRTRQIGL DIAVFDHYTGYARPANTLSGGETFLASLSLALGLADVVQAYSGGIHLDTIFIDEGFGTLD GETLDFALKTLLQLQGDGRLVGIISHVPELRERITTRLIITKSDRGSAAAFELL >gi|290781207|gb|ADGP01000020.1| GENE 60 60339 - 61487 1038 382 aa, chain - ## HITS:1 COG:VCA0520 KEGG:ns NR:ns ## COG: VCA0520 COG0420 # Protein_GI_number: 15601280 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Vibrio cholerae # 1 377 1 378 379 268 39.0 2e-71 MRILHTADWHLGKMFYGEYLTEEQAHVLTQQLLPLIKEERIEALIIAGDIYDRSLPPVGA VALFDEILTKIAVEAHVPCFIISGNHDSATRLSFGNALMEKEGIFIGGELATLHSPIVLE DRYGAVSFYLLPFAEPAVVRQYYSEETVKDHETALRCLRSAQKIVQDTRSVCVAHAFVTG GVPCDSERPLAIGGSECVDVSCFDGFSYTALGHLHGPQKAGGRDNVRYAGSLLKYSFGEA KQKKGVSIVEIDAKGHVAWEQIPLVPQHDVRIIQGRFADIMTRPEANKEDFLLVRLEDEE PILDGLAKLRKKYPHVLALETPNRMIQGAPERKFDVRHTNERELFLNFTMAMRDGRTLSE HEKEWTETLWRRLWQEGGDGLL >gi|290781207|gb|ADGP01000020.1| GENE 61 61552 - 61962 383 136 aa, chain - ## HITS:1 COG:CAC2634 KEGG:ns NR:ns ## COG: CAC2634 COG0735 # Protein_GI_number: 15895892 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 2 135 3 137 138 114 39.0 6e-26 MNIAEMLRTNGYKVTPQRLAVYEAINHNTTHPNAESIYKQLQPNYPSMSLATVYKTMEIF AKIGVVRVLQCGEDSHRYDYKTASHAHIRCVKCNQVFDVNIEQEPLIREAERQTGFSIDD MNLSFIGVCKDCQEKE >gi|290781207|gb|ADGP01000020.1| GENE 62 62480 - 63193 651 237 aa, chain - ## HITS:1 COG:RSc0949 KEGG:ns NR:ns ## COG: RSc0949 COG0861 # Protein_GI_number: 17545668 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Ralstonia solanacearum # 18 218 19 219 230 132 41.0 8e-31 MKALEAAVMFDITMVLQVILLDLALGADNSVVIGMAAKNLRPDLQKKAIIYGTIGAIGLR FIMAFAVSLLLRIPFAKTIGGILLLYIGMKLIGSQGEEAARGVAAKSSLLGAVQTIIAAD ALMSMDNVLGIVGVTNNHWGLLILGMMISVPIIIFGSTVVVKIMNRFPVLIYMGGAILAW AAASMIFTDGYLLSYFPKVNQYLWAGKGLCLLLTIGGGVGWRYRACIFKKNRNFAKK >gi|290781207|gb|ADGP01000020.1| GENE 63 63361 - 64779 1584 472 aa, chain - ## HITS:1 COG:CAC2542 KEGG:ns NR:ns ## COG: CAC2542 COG0277 # Protein_GI_number: 15895804 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Clostridium acetobutylicum # 11 462 13 465 467 349 42.0 8e-96 MAKGTVSPEIIEELKKIVGEKYVYTDKDKLEPYSHDEVTDPHYMKEAQVVVLPASTEEVS KVVKLCYDNDIVMVPRAAGTGLAAGAVAIFGGVIISIERMNKILEIDMDNMVCVTEPGVT TSVLQEEVKKKGLFYAGDPCSGDSCFIGGNVATNAGGNRAVKYGVTREQVMGLEVVTPSG EVVMLGGKFRKNATGYMLMHLYIGSEGTLGIVTKVIVRLVALPKYQMDLLAVFDTLDAAI ALTPKVMNAGITPVCVEFMDNASIKQVEIFLNEKLQHSDNGNYIIIQIAGDSEDVLDEQC EIIDELARKNNALDVLVANPAVIWKSRKAYLEADRARSLVFSMEDIVVPLTLIPEAVQLI SRLSDKYKVAMHCAGHAGDGNVHIDILKDDRTQEEWEEMLPQIQGEIYEIVARMGGRLSG EHGIGYKRESLLEKYGNPIELELMKKVKRALDPKNIMNPGKVISINDEVPVE >gi|290781207|gb|ADGP01000020.1| GENE 64 64825 - 65013 77 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYPVRYCPAQERGARRCTVEGTTAIQTLYAVLPGIKIFSIPCLSYLIITHYIFYVNYLL TF >gi|290781207|gb|ADGP01000020.1| GENE 65 65207 - 66007 1179 266 aa, chain - ## HITS:1 COG:lin0414 KEGG:ns NR:ns ## COG: lin0414 COG0345 # Protein_GI_number: 16799491 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Listeria innocua # 5 266 4 266 266 238 54.0 7e-63 MFNTVGVCGVGNMGKAIIKGIAASGLMKPEQLWIYNIHTEKAEAFAASTGVQVARTPAEL AAHAEAIIMAVKPAVIPQALQAIGPFITSHTVLISIAAGVTLSRLEAELPAAAKVVRVMP NTPSMVGEGMAALAVNEQLGAAETAAAVALFRSFGKAEVVKEALMDAVCGVSGSGPAYVY LFIEALADGAVQEGMPRELAYTFAAQTVLGAAKMVLSTGEHPGVLKDAVCSPGGTTITAV HALEEGGLRATVAKAVICAAEKNREL >gi|290781207|gb|ADGP01000020.1| GENE 66 66078 - 67334 1553 418 aa, chain - ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 7 407 3 407 415 297 36.0 2e-80 MINSVAAPQARGKSAEDKIFGANNRATALAVQLGNDRVINGTVGAILDEEGQLVMLEAVQ KAYRELTPRDMVAYAPIQGYEDYLTAVAAQCFGQSRPAGYIRACATAGGSGALHHVIHNY SQWGDEIISSDWHWGAYDSMCKDNGRSLRCFSLINKEGTFDFEDFQTQVKAVFEEQENTV IIMNSPANNPTGFALTATDWDRVLAFLEGLLQGSKKNIILVPDVAYLDYSGEKEECRRFF TKFGNLPERLFVIVAYTCSKGFTMYGQRMGAMICVTPNERLADEFVAINQYSSRATWSNS NSAAMKVMSHICQDPVQLRSLEKERQQYFDLIRERADIFMNEADRCDLKYLPYVSGFFIT VPMDNTQAVCDYLEKQNIFLVPLRKGIRVAVCSISKNKLKGLAEKIKVAAETVGARYL >gi|290781207|gb|ADGP01000020.1| GENE 67 67432 - 67533 100 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYEKMVWYSSSSYTQQMFFVDRLVREKYLKIKA >gi|290781207|gb|ADGP01000020.1| GENE 68 67702 - 68661 649 319 aa, chain + ## HITS:1 COG:AF0088 KEGG:ns NR:ns ## COG: AF0088 COG0715 # Protein_GI_number: 11497708 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Archaeoglobus fulgidus # 36 316 26 299 300 196 36.0 4e-50 MKKIFMFCSLLVCSLLFLLSGCGNTQTAADTPKPYKIGVLRIDDSLPLYLAEKEQLFKKA GVPVKIIEFNSAIDQRKAMEAGELDGMMTDMIVTGLLKKGGNDVRIVATALGADKTEGRF LVVSAPNSSLKTARDLPKGNVAIAKNTMMEYLLEQYETELHLPKNRIKTIQLPNLSLRLN AVLAGKDVQAAILPDPLAAFAVRQGAHILIDDTKLKENYSQSVIILTQTMITNHRQDVTK FLTAYNTAIAHINQNPAAYRNLALQKANIPKSLAASYKVPAFTEKSVPAKENVQRVMNWM VSKHLLEKPYTYDEFVLPQ >gi|290781207|gb|ADGP01000020.1| GENE 69 68636 - 69352 194 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 13 216 5 213 305 79 26 1e-13 MMNSFFPNNPPLLALQNISWSYQPQQPLFRHFSLRIRAREHYSIIGTSGSGKTTLLHLCS ALLAPTSGHVYFQGAPLYKPHPRISVVFQHYGLFPWKTVEENIFLPLRLHNAAGLPPADP DLPARLELEDIRSHYPHQLSGGQQQRVALARSLISHPRLLLLDEPFSALDEYTGALCRRE IHRYLQQTDATLLLVTHNLTDARSFGTNILVLSHKKGGVPRVVPHSTPASVLRTFLEP >gi|290781207|gb|ADGP01000020.1| GENE 70 69684 - 70094 331 136 aa, chain + ## HITS:1 COG:AF0086 KEGG:ns NR:ns ## COG: AF0086 COG0600 # Protein_GI_number: 11497706 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Archaeoglobus fulgidus # 1 135 109 243 244 113 42.0 1e-25 MAMGLGNAPKIFLISCTVFFHIAIVIRDAARAIDPMQVAILRSLGATPGQTFRHLLWPAC LPAILTALRTGLGIALALLFITETFASYSGLGYFIMNAMETRNYEDMYAAIITLGLLGIG FYILLDRIERKACPWK >gi|290781207|gb|ADGP01000020.1| GENE 71 70250 - 70405 235 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968622|ref|ZP_06560160.1| ## NR: gi|290968622|ref|ZP_06560160.1| hypothetical protein HMPREF0889_0262 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0262 [Megasphaera genomosp. type_1 str. 28L] # 1 51 1 51 51 81 100.0 2e-14 MIIRDNSVKPGDLHKPEQSKKRGEELILDFGRPLTEEEKKIFAKLQEGLDL >gi|290781207|gb|ADGP01000020.1| GENE 72 70538 - 71722 1346 394 aa, chain + ## HITS:1 COG:lin2884 KEGG:ns NR:ns ## COG: lin2884 COG0477 # Protein_GI_number: 16801944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 9 390 3 388 402 210 34.0 4e-54 MKDLGECMNWKVCLSILTSNVIFMAATYTMLIPFLPMYLTKELGVTAGTVNIWSGIVFSA TFVISAFMAPIWGRLADKKGKRLMAVRSSLLLTITYFMGGLVHTPLQLVFVRIFQGFAAG LWPMELALMSTYAPPKKQGFCLGVMQGALTAGSVIGPLFGGFLADCFGMRMSFFMAAAVL FLNTLVLLFCIKETPPVAAVSDSLTDRPSLWKNPLIRRMLIYAVFVQMVILLIQPVLTLY IQNMTGPIHNIIFISGLVFSLGGIASAASSPLWGRFGQFHGFRKSLTIAAACAGICFLIQ AVPNHLYYFAATQFAVGLFFSGLYPSINALLAENTTSQEKGSVFGLLFSAQQIGSIVGPL AGSAIAVCFGMKYIFIVAGLILLAMSASLYKKPA >gi|290781207|gb|ADGP01000020.1| GENE 73 71908 - 73098 1180 396 aa, chain - ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 395 1 393 393 426 54.0 1e-119 MASKDMVALGAQSSVIRDLFAYGQAQAAIVGKENVFDFSIGNPAVPPPDSVAEAICHIVQ SEPAVGVHGYTMAAGDRTVREGLAAYMNKTYQAQVTADNFYMTCGAAASLTISLKALVEN ATDEIILVAPFFPEYTVFIKNAGACPVILPPDTEHFQISPAALEAAITPQTVAIILNSPN NPSGVVYAPETYAAVAEILKRKSEEIGHPIYIISDEPYREIIYDGKPIVYVPKYYANTII CYSYSKSLSLPGERIGYILVPPQVTDAHTIYLAVCGAGRAMGFVCAPHLFQKVVLQCMGQ VADIELYDRNRKLLYGSLTEMGYECVYPDGAFYLFVKSPEADATAFSEKAKKLCLLIVPA DSFGCPGYVRISYCVEEAMIRRSFPVFKKLIDGYKE >gi|290781207|gb|ADGP01000020.1| GENE 74 73154 - 73570 538 138 aa, chain - ## HITS:1 COG:no KEGG:CLJU_c11350 NR:ns ## KEGG: CLJU_c11350 # Name: not_defined # Def: putative positive regulator of sigma E activity # Organism: C.ljungdahlii # Pathway: not_defined # 1 136 1 136 138 102 37.0 3e-21 MKIEEGAIIAIPSPGLAEVKVGRHSDCMACGSCPGSENIVVTAVDPLGVEVGQHVKFEVR ESNIVVGAFVCFIMPLLITAIGAIGGHYYGLREAADAVHTAVIGGIIGFLVGVGGVKVFD RSLRNDQTAKPKIIEICK >gi|290781207|gb|ADGP01000020.1| GENE 75 73786 - 75873 2589 695 aa, chain - ## HITS:1 COG:FN1190 KEGG:ns NR:ns ## COG: FN1190 COG2217 # Protein_GI_number: 19704525 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 83 686 116 728 735 452 41.0 1e-126 MYTRAVITLNRTLPQRVRPMLSAKIRQTVGMAAATVEETQIRMYYTGNPDWAYIRTLISG YELTYGKKKEEKKEWDVAAYRREAILSVGGFIAMNILRKTNPEFYGSILLIRRLFTLYIA RRVIKNGVMGLVKDHQANADTLTATAVAASLLAGKPESSLTLLALSNGAEMLTEYAAEKA RRQISGLLKLDQRDVWLIEHGRERKVPVESLKVGDHIAVHLGEKICVDGRVLSGNAAVNQ ASITGESNPAIKQSGSFVYAGSVIEAGDLIIVVEKVGADTSLAQIIHLVEEAQTRRAPVQ NFADKMANMLVPISFIGAAIVYGATKDWQRVLNLLFIDFSCGLKLSTATAISAAIGLAAR KGILVKGGNYIENLADIDTVVLDKTGTITMGVPQISHIDTVEGVEEKEVILLAASAEMHS VHPLAVAVQKYVKGKGWDTPPHDMSETVVARGMRAQVPSFEQYAGGFVLVGSRRFMTEEG VTGVPVTNDTAWGNNILYVACDGRYIGSLTIQDPVRPAMKKTLNQMRRIGIDEVVMLTGD SKEVAAEVARNMDIDSYHAEILPEDKANYVLKLQKRGNVMMVGDGINDAPALAFADIGVS LGGNKTDIAAESAAITIRSEDPGRLYEALRIGRRTMKVINQNFTATIVVNSAAMLLGALG RISPLWAAVIHNTATLAVVLNSAGILGSTRRKIVR >gi|290781207|gb|ADGP01000020.1| GENE 76 75876 - 76529 721 217 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0561 NR:ns ## KEGG: Selsp_0561 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 59 215 109 274 278 98 36.0 2e-19 MSLISGLMLGASIGKAIHGMFLKNDHHGAHVLDFVSKSARTHRSGGARTRKKKEEILPFS CVSATPGRRRYRVAELVDNTALAALLQEHLLRLTSVNEVQVHASTGSILVCSDNESVLDE VERFLRFRLFPLRREEEAREEHLDAHGGPTVYMEKIYETLDGFSHFILRKTGRMFDLRSI ISLILVIRGLRKILTFDQRPTGPQMLWWAAALLRGRR >gi|290781207|gb|ADGP01000020.1| GENE 77 76532 - 76825 246 97 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0463 NR:ns ## KEGG: Selsp_0463 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 10 96 13 99 100 71 43.0 1e-11 MFFPSLSDLQWEFILRAVQISSYIPGRIRLRSGKLVGNTELSKKLSTMAAQYPEIRKLEI NTVTGSALILYNTQAVRANSRFAKVEQYIKMHAERRG >gi|290781207|gb|ADGP01000020.1| GENE 78 76915 - 77133 440 72 aa, chain - ## HITS:1 COG:no KEGG:Selsp_0559 NR:ns ## KEGG: Selsp_0559 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 1 72 4 72 72 76 70.0 4e-13 MFQNSDFWIGLGVGVIAGIFGYKLMSEREQQLMALQQPAGGAVAANVPLAELQRQKEELE DMIAAQEAAQAQ >gi|290781207|gb|ADGP01000020.1| GENE 79 77795 - 78268 547 157 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968630|ref|ZP_06560168.1| ## NR: gi|290968630|ref|ZP_06560168.1| hypothetical protein HMPREF0889_0270 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0270 [Megasphaera genomosp. type_1 str. 28L] # 1 157 1 157 157 194 100.0 2e-48 MKKSEQRVKKSILMLFALGLVCLSPSVFAQGEKTITLSAEQYQTLKQTIQEQDKTLDTLE NNLNRQQNRQQERSKQLQQLNKQLDNSKREMTKTMRTLQSANESLAQADNLLKRQAVSLQ TLTELIKREEHKKTVIKRQRDMYAVLALLAVGGAVIK >gi|290781207|gb|ADGP01000020.1| GENE 80 78272 - 78892 486 206 aa, chain - ## HITS:1 COG:VCA0123_2 KEGG:ns NR:ns ## COG: VCA0123_2 COG3409 # Protein_GI_number: 15600894 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Vibrio cholerae # 2 127 100 225 298 87 37.0 2e-17 MLGDLSAKYESNGKPGLISNGKGDPGGKSYGCYQLSSKAGSLQDFCRWVVREYPWIGITL QKSGNFDQAWKECATVDPREFATAQWAYIKEKYYDVAVRCLSQNGYHIDKHSNAMRNVLW SRAVQYGTGRMVKMWQEACKCMYNGSNYNGYPNVTYVDDKRFDYDLIVAIYKVSKAWIRA EAVRVGLERRFKDECAEALQMLKGER >gi|290781207|gb|ADGP01000020.1| GENE 81 78964 - 79689 373 241 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0971 NR:ns ## KEGG: HMPREF0424_0971 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 6 209 11 219 222 173 45.0 6e-42 MKNETYEEFVEKFKPKKTTDDCYTPPDIYEIIMEYAVEKNGWQGRPVVRPFYPGGDFENF KYPTNCVVIDNPPFSILSKIVNWYNEKGIDYFLFAPVLTFFNLNTPCHIAADCRITYENG ANVNTGFVSSKGALIETSRKLKRRIQQYYATKRMINNPKRKYTYPGNFMTGAKLNSLARH DIDIKITEGERVPTLYTASGKGRKVFGSGYKTNIDVSCLFDEIGIPTSAGEKLFYKGDND G >gi|290781207|gb|ADGP01000020.1| GENE 82 79701 - 79997 318 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968633|ref|ZP_06560171.1| ## NR: gi|290968633|ref|ZP_06560171.1| hypothetical protein HMPREF0889_0273 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0273 [Megasphaera genomosp. type_1 str. 28L] # 1 98 1 98 98 142 100.0 6e-33 MRDKVQQFGQWAESHWLALVIIMVTCMLMFLLLVLLSWLIGYWTNAIYHTSFELESCWSG VAAIGTGLGSVAALATAAWAKYHTDSKYNSDDGNPPTV >gi|290781207|gb|ADGP01000020.1| GENE 83 79987 - 80247 286 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968634|ref|ZP_06560172.1| ## NR: gi|290968634|ref|ZP_06560172.1| hypothetical protein HMPREF0889_0274 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0274 [Megasphaera genomosp. type_1 str. 28L] # 31 86 1 56 56 92 100.0 7e-18 MNILEIISTACVVSGVLGVVFRYAVLNPLYMAIQALQDAVKELKVQIRDMDDKRQELSVR IAKIESSTNSAHKRIDDLKKELNHEG >gi|290781207|gb|ADGP01000020.1| GENE 84 80244 - 82097 992 617 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968635|ref|ZP_06560173.1| ## NR: gi|290968635|ref|ZP_06560173.1| hypothetical protein HMPREF0889_0275 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0275 [Megasphaera genomosp. type_1 str. 28L] # 1 617 1 617 617 1022 100.0 0 MNELGKKCVQNVNAEYEKDYATLKTLSANTTDTVQTINNIVSTTKEFIQNHENNITDITG GYVKKVADKCNESVQTLADTALQEKKILTDTQTQLIAELNNNAQTHLNAFGINKQEFTGA IETAKNKAVEVINQTKDTNVGIISQTGNELLDKMTGLKSATQNNADTVANNLQSIQSIET DVKNVQSGILNDKAEITHLTDTVRQQSAEIKTIHLNSLQVKDYTEQAHNAMVSAKKYAEQ TKHNAEGNWVKSVNSKMPDSNGNVAIDLSLYAPMSYVDTATQKAVDGVNQSFETKLNAYQ SAVTDKIATSKNNFDEILKDYARKTDVPSQIDLSGYATKEQITTVTENISATQNSLNTVN QQINNLNNTASILRSDVSNNKSILNNIGNIYAKKSDMPDMSIYAKTTAIPSLSNYVQKTE LNAYAKKSDMPDMSAYAKKSDIPSVSPSGTTVDDYCVPDGTEVVTNDMFEKYHLTKKVIL LFPPSVKKIDDFNFNTRPYQKDHFFLMMVSLPSCTTIGKYVFAECNSIASITLPNCTTVG ENAFYACNNLTSVSLPSCTTIGYNAFAYCQDLNELIININCKNIDNIVDNFNNYDIVCNI YTAGKTQKYKDGQWVSI >gi|290781207|gb|ADGP01000020.1| GENE 85 82139 - 83113 445 324 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968636|ref|ZP_06560174.1| ## NR: gi|290968636|ref|ZP_06560174.1| hypothetical protein HMPREF0889_0276 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0276 [Megasphaera genomosp. type_1 str. 28L] # 1 324 1 324 324 579 100.0 1e-164 MISETRFSIEYEISDTGKYIFPYPYEDTDSIKGYGVTKEGYIAPIKENYYFDGSTNTFIY PTNGQKVEYVKILLRRQTPVVSSLSVPNGYPFYGIEKEFTKHTMWIQEISKQMVDTHNDA RHVDIVDNDVTNMKAEIIRKMDKATLDCTTERKLAKRWAECDESPNGEQDTESPTNKTQS SKSWALQSKRAAEDCKEKETEIKTIVADGKREAANMISTVQQEKNESLQAINAFNSRLSE AKSDIENNMRKAEGEYTSYLDTLNQTGETAVQKVISAGNTATGEISRLKDTKQEETQRFY DQCKYNLNGVTLQHLDELQNKKRI >gi|290781207|gb|ADGP01000020.1| GENE 86 83110 - 89556 3928 2148 aa, chain - ## HITS:1 COG:no KEGG:LHK_01554 NR:ns ## KEGG: LHK_01554 # Name: not_defined # Def: hypothetical protein # Organism: L.hongkongensis # Pathway: not_defined # 1402 1962 1270 1814 1940 160 24.0 9e-37 MKIDITNYNKPSIFGTLPTMNDYFNNKNKIANMGKHVEQMQQARDNAVTQALETRQIHVR PQPIYDPNPQIWGNLHAQDNPNTANAIYRNLFCNGTNPTQANTYAPSLGVSPQFLMDNPD YMQQAKTQYDSAKKWEFLPPTITFGGAELDSEYPELSTYRKQNSVGATIALQNHQAVKDT RGIFAKLEDGIKNTGRLFENAFLSGLTSINKTDATLDLMKNNTRENYNRVVSLDKKAQEY QMARPHSFEGQAVYDTVQQLTMYGLQAMKASRQAIQGASLGMATVAPFALALAPETLGTG TLATLAAGATTGANIGFKTGLFKAFSDQATADRYWSMYNKKDKNGNPLYSQKNMQIDSTA IGTISGAINTGLFCFAVKPIASVFGTSAVTKLFNNAVARKKVIGAGRKAILAMVAKESAA QFGRNFIAQTAQEGAESVSNDMADNIEYSIHGQGNQYTPYDVMHNAVSAMINAVPSAVGL GVIGAGFHARGNYANLRALGHATFGDNGELYKRAIEKNAIQELIENKKTNELAKNNPDVF QKVVHEQAKNTGMDTMHVDTRELFKSEEGTKVVQDLIHKGVVTTDEVQHSIETGTDLEVN TGAFAQKIDDKFDVDTLMNATTLDENGKTVAQIKANEEQRNAIIKELSERAKGVNLSDEI INKHFADVSPQEQEFIRRAIENNSEDFTQGHAVLMEESQGNPVGERLAKKAGEYLDSIKD NHYELKQHLTDEGKEVFDATLDKLRHGNKKIKESAVQSAYLYAKMADRWAHVMNKSQKVK LDYTAKDFSNKNGILLEKGKDVKGLYDGFIHLFDKADESTFVHESAHAFLSGYKNIMEHA TNLDEDTKNEYNELQDWLSYDPDKIKEYQGERAKEFKGYEKDIKTARKNGDKKAEKQALE RWEQERFARGFERYLKEGKAPSISLKNIFRKFKDWLTGIYKDSKNIGAEVPEQVERFMDK MVATDKEIDTATRIQELATLTQDPKATALNEDIRAKAKETVFADMLQDEINLTEKEKQEE INQYVEETKRKLCAEDKRYSLENLANEYSHDKGILDMLLPQTGFNSWEEFYKSLDETDGR LDKRLEESRKFATKEVNGKHMTEEEIQEETEKALTKCGGQLQIVDEQLKTLDKELYSVVA KLADDTADMETQFKELINNKGVIGTIIRKNNSIKAIIKELDEKKTFNTELYGKAKAEIKA EIFNALTTEKMSVKEVTEHAREVLNAVSVSNSQKWRNYNNKGNQAVANATKYFNGGDVFG AIRELANAKLYFAMAKTATENFENIRIMLQGKKGVLDKNGNEIYGIKGMVKKISRKNAPK RMEPNARYFLQQAAYLLGITNEGGNPLKDENGEEIPLDWKTIAKSLDPEWGTEQNTAPNL DNVIEPELRAFIEGDKQIDYKKDLTLDEFTSMYQAMKAVYRTGGREYEGNTIFDRNGKKV SIQDAISRLIGTFELKEDYDAEQVERNKTFKDKIKDKSYDFMLDIVKPETLLRSMGSELW TDYIYKPLDVAGRKELEMNAKAMKEFSRIRKTYTFNEWRKIRNDRIYSMGTHTHYTKEEI LVMALHWGSDTGRQRISDELQMGTDEVEKEFSKILNDKDVEFISSVWKQLEGYWGARNKV QERLTGVGMGRVKPMSYVINGHELKGGYYPIAYDSRFNATVKDQEMDDIAKLNMNYSAMS IGMKGTKNRVDKVYGKIVRKSLDLWADSIRESIHHITTREAVTDVYKILSDKELGARISQ EIGVDAYRMLLKWSRDCWRTDIAKMNAFTRFLESQRKNVAFVTMAFRTNTAMLNATNVFP MIHEIGALNTLKAFHSFGFPYFSDTYKQNREFVQTHSPFMGERINTIDRDFVRGLSLDVG QGVGEMQGKAIHMRDTINRWGYWFLSETDLMCSLPLWKYQYDKTVNELMEKGTYDKDTIH DRAVYEADKAVRNVLGSAMVKDQPEVLRNKGIISAVTAFYSYSNTQINALIHAGYEWRKG NRMAMISAVLYWQVLATLLETVYRSAVAGDTMNEFANRLKVRFVANLTQGIPFVRDFAES GMNYLQGMKNFDSTTLLGLRSFGDINKVIGAYESGKDLTDIGRNTSRAINPYIKFPDTLS DGLWDLMRFSLYDTDRSMRELLTSIVFDKRYRTAEERQRAEKRKEKNK >gi|290781207|gb|ADGP01000020.1| GENE 87 89568 - 92243 1196 891 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968638|ref|ZP_06560176.1| ## NR: gi|290968638|ref|ZP_06560176.1| transglycosylase SLT domain protein [Megasphaera genomosp. type_1 str. 28L] transglycosylase SLT domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 891 1 891 891 1688 100.0 0 MKITPYNPEVTPNTVTGEVRGNTDINAVGGMTASNQAKGVLLDEASKQLQLYMDGQIKTS IIDAKNKYEQDMTNLLHNPDTGLLNRQDINALDVTKQYEQEERKIRRQAMTMLPNYKQAK DAFEEMANGINTRTVGTVMEYQYNKDMEHRKNTMQIALDNDVNAVVQNKNWFDIQKAFIK NQATAHVLFDNVYGDDVINAQVKAKNTNAMKTVMQNLMASGNDDDYNTGLQLLDTSAPFI NIQDMANIRQGLLTRQHENFKTQLAKEAFNRFPDNPIERKKWIIDHSTRTVLAGGANTGN AIHNYIVNYAKEYGLNPQWVGAMFSVETGGGNPDAIYNAGHGGYGQITDGTAKYMKIDEL FPNWRTDPQMGIKASIYVLKKKIEQNGGDIQKGLYAYNGGGDPQYMKKIKAAYDYITKNN YFEGGNSGTGYERNLIEGFNKTSAIPQNGRVGCAEVALAASSWANPIAADAYKKGLFNVR EMAKYLQQCDVKETSFNPDKLNVGDFIVYQNNNRDYAHVVVYDGRGGFYGNSSSANNGKG GKIHGDSIYIPGLTPTHILHMGAGSVNGTHPKIETVLNDEEIEQVYGMANNYARQQEYAQ NVSDNNLFEAGTTEMDRLHKNGITAPETYHAITEKYGTNARVYSRLLSVERMYSVPPKVE RDETGTGGGRRGRGTGATFGGGFSGRRLNKDDMVILKSQIGYNFSSLPEIFGYCKQHGLA LTPTQQNDLAKTMGRYLRGENEYAPEYKIDVKKIAREMGKNPNALNIPVAEQLTRQKSLD FENKYGRMPTYNELKGLCQSALITDINGYTQTDLRSDGFNSVDPIPGTKYSNVYTTGGNH LTIYNGTIDQIKRGEQFLINVERHREVIPVTHKPQQHKQTMWERFKRFFGH >gi|290781207|gb|ADGP01000020.1| GENE 88 92256 - 92909 612 217 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968639|ref|ZP_06560177.1| ## NR: gi|290968639|ref|ZP_06560177.1| hypothetical protein HMPREF0889_0279 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0279 [Megasphaera genomosp. type_1 str. 28L] # 1 217 1 217 217 367 100.0 1e-100 MCATPWLMALSALRGINEYQQQQQQYNAQMQIYKNQADIAEQNARISQARQNQIAEQHAF EQKRLNDRMRLTAGHIANETGASGLTLNGSPMDVLLSGYGAWKQDSDTNLYNQRNNIWSE QLNENNYRNQANSARAAYANIQGQKRGSLWSTILGTGLSMYGIGRRYAGAGMHQDYIHAP LLAQSFGSNGLMDGLEWRMGKRLYKTFGINAPWRERW >gi|290781207|gb|ADGP01000020.1| GENE 89 92911 - 93363 359 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968640|ref|ZP_06560178.1| ## NR: gi|290968640|ref|ZP_06560178.1| hypothetical protein HMPREF0889_0280 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0280 [Megasphaera genomosp. type_1 str. 28L] # 1 150 1 150 150 276 100.0 3e-73 MLIIKPFTWKENKKDYKYILKHLRKIDKLEIELSYSDVGSWIQDKHQRYRYIGYNDGIPV LLYGLYTKRHEWGNIIWCIGTDDIKKCAYSFVRKSKGQLKEWKKYGDMWNFVLSENTESI RWLTTVGACWKESVSINHHHWVRFSIKGGK >gi|290781207|gb|ADGP01000020.1| GENE 90 93363 - 96482 1332 1039 aa, chain - ## HITS:1 COG:no KEGG:E2348C_2746 NR:ns ## KEGG: E2348C_2746 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 575 833 309 567 825 186 35.0 4e-45 MQNVFITQNSFTTGEISPEVAERTDLEKYKSALLQAENAVVSPYGSVSRRTGSKYIGAIK YADKEAVLVPFMDSSDRSYLLEVGYKYIRVWKDETMEQEIDTPFEYPKELNFTQSGDTAF ICSGRYPVYELLHGRYWELRKFDIPKPYFDDIISAIENVSDVNYTESDTPVFSQTKAGDY TFTPTVSGLYKIVLFGGAGGKKGTIEHYAGSTKHDEAIYHYEYGVAGNEGQKKIVTVKLK AKTTYSIHVGKGGEDGDKHKKGIARGWEEGDVYNSFLNGGPGEDTTVKGNSDGVNIVAKG GATFTGSKFESPRKNKLIKEFYKQDPTISMLYRQNFVTNKYEKDYFGIPEFNIAKVGFGF LKIEVNGWSDFDNVALFGNPTGACFIYFLAAEKEETPHPDSIEDTSLQITDSKITSSNSI FVQALKNTKIKIVQTQQSKSVEMTLGENEEEQTSGAVYVGEKWKISTSGIHNSRIVIERS LNGQQWHEYRKYISKDDQNFMESGSEKEKCYLRVKAKTQGKINTERKDSDNLSVVLSALP FENEGIIEITDIVSPKEIKYTAIEPVIPNVPVDAFAFSSWNDRNGYPKLSCFFQDRLVFA GTKKEPYSLWFSRTGDYNNFSVEKAEGTVTEDSAIKLDLIVRNLYEIRHLVPSNDLIVLT SGNEWIISGDTAITPTKCTPKVQTMRGASNCKPWHIGNRLIYVQRDGGTIRDFGYSYDSD NYNGDELNLFASHLTKRHQMVSSAYCQNPYSTLYFVREDGEIICLMLIKEQNVCAWTHWN THGKYLDCCSVLENGKDYLYVIVERTNREAQIVRYLEKFDLSATNDTGVYLDCWTTTFAT IMQENQSIQIDAPQLNGERFYTIAKPWEKGGLRQRNTEVIFDGWIDKNKTSKPLHKDTYD IYTGLKFYTHITFPCLEMASPDLSLRGRTYKLNQIYLSLYQSYGGELMINQNKYEKFRYN DIQYTYLDSPQIYGVGIFPYVADWDIVQTVPQLDKGISSKNVLGIRTDTPYPFTVKSITK EITVGGGMVRTYNGGGIKG >gi|290781207|gb|ADGP01000020.1| GENE 91 96485 - 97183 614 232 aa, chain - ## HITS:1 COG:no KEGG:Desal_1440 NR:ns ## KEGG: Desal_1440 # Name: not_defined # Def: hypothetical protein # Organism: D.salexigens # Pathway: not_defined # 25 230 3 185 197 88 31.0 2e-16 MAEYKDRAYDETPPGFMTRTRDGHLTETHLCNMALSYLGKGSIQELTNMNENAVTCSLFY DITRQEVLRTFNWGFAHRIEPLSVLVTERVDENGNKTDIKDKLPSNFSNFYMYPYKCIKL NAVTIHGDDSQRMEFETLSVGGIKAIATNIGNAYADYVCDETNPNEYDSLFITAFTHLLA SKIAVRLTGMPQLEQAQMQIYMQTVQQAHLYDSRETRTNTIWKGSYLNARRG >gi|290781207|gb|ADGP01000020.1| GENE 92 97402 - 97746 401 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968643|ref|ZP_06560181.1| ## NR: gi|290968643|ref|ZP_06560181.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 114 1 114 114 186 100.0 6e-46 MVIDNFNTFFDNEQLNGTKKTGKVIHTGEGDANNPLFIVALTTDASADTSITIETSKTAD FATSEEIGTIDVKKDKLNVARVPYGDLGYLRAKTGTNATSGTISAFLTLDAELH >gi|290781207|gb|ADGP01000020.1| GENE 93 97763 - 98752 1184 329 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4044 NR:ns ## KEGG: APECO1_4044 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 4 328 10 329 330 223 39.0 1e-56 MSEALTFNDLRKRLGADNKVDWIMEVLAESNPIMDDIKWAEGNLPTGNQTTVRTSYPHPQ LRRINRGVKAGKSTTKQVVDTCCLMEAYSEVDVRLVQLAPDKQSLRRSEDTAFLNGFTQD LSKYLFYGDTTKNPDEFNGLSIRYNTFDEEKGMAGYQCINAGGKTAGKQSSIYIVDWGDQ GVLGIYPKGSKAGISIEDKGEQITLDEQGGKYRALVTWFSWDAGLSVKNIRKVACVRNID LSNKPSDKSQARQDMMEKIIIAKNRIVNPQKPVAYVNEDVYTEIELMLSDKNNVYVTRQD LAGGIPKLYVQGLEVKRCDALLNTEQVVK >gi|290781207|gb|ADGP01000020.1| GENE 94 98766 - 99470 950 234 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968645|ref|ZP_06560183.1| ## NR: gi|290968645|ref|ZP_06560183.1| hypothetical protein HMPREF0889_0285 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0285 [Megasphaera genomosp. type_1 str. 28L] # 1 234 1 234 234 265 100.0 2e-69 MDETQGTQEAQGTQQTQGTQQAQGTQQTQQTQQTPDTVFQNSQQTALGQNAQTQGQNGQN QGQDGQTQGQQQAPETYDFTKAVTDVYGEGGELDAETTKQFTEQLKQLNATQEQANTIAK FGLEYAKSVGQATMQAVHQAYEKQISDWGEQSKKELGVDFEKKVAQATVTRGYLDKLIPN FTEMLNQTGAGNHIAMIKALAALSEFIKEDSGTGTGTGASMNNSIYDNTDFSKY >gi|290781207|gb|ADGP01000020.1| GENE 95 99474 - 99767 274 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968646|ref|ZP_06560184.1| ## NR: gi|290968646|ref|ZP_06560184.1| hypothetical protein HMPREF0889_0286 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0286 [Megasphaera genomosp. type_1 str. 28L] # 1 97 2 98 98 161 100.0 1e-38 MKINTEKTELEKKDELCIDTVLDTKEGRWLFMRLMEVTGFYQPSFNADPVKMAYQEGKRA VGQYLLYELTRTEDRITKKQLAENEYMTEKKILNKEV >gi|290781207|gb|ADGP01000020.1| GENE 96 99767 - 101500 1587 577 aa, chain - ## HITS:1 COG:no KEGG:Desal_2347 NR:ns ## KEGG: Desal_2347 # Name: not_defined # Def: hypothetical protein # Organism: D.salexigens # Pathway: not_defined # 24 524 4 501 555 276 34.0 2e-72 MDTILSKQQAPQATPKPQQKITGIDKQSCVKMLDSLFKQQQKYIPLWKDIRNYELPYDGE LGDDVIGAPAMHDEEIYNGITAQARDTFAAGIQSGLTPPSRKWFRFAPTDASLDNNIDVA RVLDERCEIMEGVLSQSNFYNVIHSAYKELPFGQSPVGVFADEKGVYFVNYTIGTYALGA DGQGRINTFARKVKMSAAQIVSLYGDSVVTDSVREAVKANGGHEDYYTVCWLVYPNPKAK PTGGNHDMKFLSVHWLEGSDPNSLLAAKGFEEWAIPVARYNVKGIDAYGIGPAWDALPES RMLQKMEYDGAIALELSIKPPLVGPAELQGRINLFPGAYTPSINPNDNVHSIYSGGLDLN SLQAKITQIEDRIKRIYSTDLFLMLNELNRGQMTAQEVMARNQEKMAQLGPVIERLQNEF LSDIIERVYNLLERNQVFPPLPDDVQQTLQGQEIKIEYLSPLAQAQKMSGLTAIEQGVSF VGQLAQLDPNVILRVNFDKAVENYLDKLGVPSTMIRTEDEYQELVQQQQQAQQEQQAQQE QAQQVAQAAPLAQAAKNLTDAANDGNPALRQMMGLET >gi|290781207|gb|ADGP01000020.1| GENE 97 101504 - 101740 283 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968648|ref|ZP_06560186.1| ## NR: gi|290968648|ref|ZP_06560186.1| hypothetical protein HMPREF0889_0288 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0288 [Megasphaera genomosp. type_1 str. 28L] # 1 78 1 78 78 131 100.0 1e-29 MCMNPLKLLFGGGGGVQKVPVIAPTAPPPTMTNVQDSTGGADIADAVRRAKKKRGFSSTV LKDWQSQDNTILGKKTLG >gi|290781207|gb|ADGP01000020.1| GENE 98 101765 - 103228 1063 487 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4038 NR:ns ## KEGG: APECO1_4038 # Name: not_defined # Def: putative phage terminase, large subunit # Organism: E.coli_APEC # Pathway: not_defined # 7 480 11 487 491 425 47.0 1e-117 MKNEDIELLQALGSLASDPVAFVYFAFDWDSEELKGQNPQTWQIKTLKEVGEGLSLSTAL QHATASGHGIGKSALVAWLILWAISTRPDTRGVVTANTATQLETKTWAELSKWYHLFRGK KFFTLTSTAIFCRQEGHERTWRIDAIPWSVDRTESFAGLHNQGNRLLLIFDEASAIDNKI WEVAEGALTDKDTEILWLVFGNPTRSTGRFFDCFHKYKKSWITQKIDSRTVDISNKTQLQ KWIQTYGIDSDFVKVRVLGEFPDTSDTQFISTAIVRTAWERRPLRTAEYDFAPCIIGMDP AWTGGDSTVIFLRQGFFSEKLAEYKQNDNDGVMAARLAEFEDKYHADAVFIDKGYGTGIY SFGVTMGRQWRLVSFAEKSGAQAYANKRAEMWGNMKEWLQEGGVIPQVDGLIEELTAPQA FINARGEIQLEKKEDMKKRGIESPNMADALALTFAYPVLQRNDIESPYYVNQTQNSNTQY TLFKKRQ >gi|290781207|gb|ADGP01000020.1| GENE 99 103218 - 103805 239 195 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968650|ref|ZP_06560188.1| ## NR: gi|290968650|ref|ZP_06560188.1| hypothetical protein HMPREF0889_0290 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0290 [Megasphaera genomosp. type_1 str. 28L] # 1 195 1 195 195 335 100.0 7e-91 MIIDEKGRKSKIKRKKIFLQKNPSLYSSDDEPRGRITYKVFNTERNLRIVKLWRGKGWSA EKIADKIGVSKQCVYGWLKKYPEFKKIWYECVDDIIYTAEKGMTDLTRPQTRKIKETITY TDKDGHITGRRERETVTTDPPDFKACKYMLENFAPDEYKDRQSVQVSGDISVTAIDIAGI LAKARKKAKENDDEK >gi|290781207|gb|ADGP01000020.1| GENE 100 104138 - 104641 556 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968651|ref|ZP_06560189.1| ## NR: gi|290968651|ref|ZP_06560189.1| hypothetical protein HMPREF0889_0291 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0291 [Megasphaera genomosp. type_1 str. 28L] # 1 167 1 167 167 264 100.0 2e-69 MKLKDYDHRYDYTVNEKPFAEGFKELYYEYRRFGGVPNSTLYLDLEYGDIYYTANDYLYG QFVYLWELCDAEGDRIRDYWTVRELEEFLNDEEIKNLRQKFIDENGYQEDYTCEEDFLKE KEHEYIDFIFAQEVPAIEKGVKEWIDDTYDLFLEQYDDTYWKLLNEE >gi|290781207|gb|ADGP01000020.1| GENE 101 104739 - 104813 85 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYYYISFQTDLQGEFKQKEKRYLL >gi|290781207|gb|ADGP01000020.1| GENE 102 104810 - 105859 810 349 aa, chain + ## HITS:1 COG:no KEGG:Msip34_2882 NR:ns ## KEGG: Msip34_2882 # Name: not_defined # Def: domain of unknown function DUF1738 # Organism: Methylovorus_SIP3-4 # Pathway: not_defined # 23 320 35 337 686 67 26.0 7e-10 MTNQKSATTNPNEVISFRSLYNSAIPLYNPVSGVQYSGKNIDKLNEEVKEQGYTDPRWFT FIQGKSLGYKLRKGSKSVRLFKFGEKKENPETKELLKNMGLDAGPDTYTAPFYVFNAKNF ENVPPFVYEYTPEEIQEIFKKIMANSRTEIVGSKRFLFYDERTDCIRVMPSERAKNIHMW HTNVLYNIILAESIKNKNKLKIFSSMDDEQRKLFAYLTAIMVQARLREPFTREQVTKFMQ LKIDIIRKGHDVNELAKFLHGATETACKICASLLKGVELKPLPLLTPSDDKTPLETVIKE VKEMQGVELKQSGSWYWASGNTKVFKEKLKELSFRFSRKRCAWYYVSAM >gi|290781207|gb|ADGP01000020.1| GENE 103 105929 - 106510 450 193 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968654|ref|ZP_06560192.1| ## NR: gi|290968654|ref|ZP_06560192.1| hypothetical protein HMPREF0889_0294 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0294 [Megasphaera genomosp. type_1 str. 28L] # 1 193 1 193 193 392 100.0 1e-108 METRESVIGFIHSETKFAAEKLQDFMDNEYGEGGEREKDVKEDLIQGLTAGIYRGNYIPD SEVPAFVLNWCNRWHCERYVTEVVTVRNYFHAGVIKEHMAEIIEIVSDGYNAGMFKFMHS ETFDIIYQEFKKDLPGRGLFGGLGDDLKDKLLPLIGEKVTTNDEPTTRLNVWRLAFFINE NWQELLDVYRDED >gi|290781207|gb|ADGP01000020.1| GENE 104 106530 - 106904 382 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968655|ref|ZP_06560193.1| ## NR: gi|290968655|ref|ZP_06560193.1| ribbon-helix-helix protein, CopG family [Megasphaera genomosp. type_1 str. 28L] ribbon-helix-helix protein, CopG family [Megasphaera genomosp. type_1 str. 28L] # 1 124 1 124 124 207 100.0 3e-52 MSKQVTLRLDEALLKRLEERAEKEKRSKQQVIEVAIAAYLDQQAYIQAILDGMRAVTYTG DIDANRAWLSRQGFTGSDDDIREKARRDLASVIDISEKELKDISTFDLLGVAFAKMSHIN KFFT >gi|290781207|gb|ADGP01000020.1| GENE 105 106925 - 107350 563 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968656|ref|ZP_06560194.1| ## NR: gi|290968656|ref|ZP_06560194.1| hypothetical protein HMPREF0889_0296 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0296 [Megasphaera genomosp. type_1 str. 28L] # 1 141 1 141 141 253 100.0 3e-66 MSKYSEFLKGIKESQINKFFGEVSHTSNKHFKFNHVINDDEIILITNNVRFIKDNPVLVI DNNKVVYLKDWNVLEIHNFKYGLYAYAVKLNRKYWKEYTFKEEFDDVYFKEADTFDSLKA VAETQNDTEIALGWGKVDGPR >gi|290781207|gb|ADGP01000020.1| GENE 106 107360 - 107689 206 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968657|ref|ZP_06560195.1| ## NR: gi|290968657|ref|ZP_06560195.1| hypothetical protein HMPREF0889_0297 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0297 [Megasphaera genomosp. type_1 str. 28L] # 1 92 1 92 109 169 100.0 9e-41 MFRLTHRNKTVGYYSTAMDALYKFIEEEEERIHATDLIFCGTDREAYFEVFEEEPPKGLT EDCFIIIDGDSITLVESRDPYDIMRGLYRVNKDWDIIEEDDDDEEEEGE >gi|290781207|gb|ADGP01000020.1| GENE 107 107691 - 107981 287 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968658|ref|ZP_06560196.1| ## NR: gi|290968658|ref|ZP_06560196.1| hypothetical protein HMPREF0889_0299 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0299 [Megasphaera genomosp. type_1 str. 28L] # 25 96 1 72 72 126 100.0 4e-28 MDLKQARKVAGLSRSELSKYFGIPMTTVDNWDYHGVLPPVWVERLIINELLRIAEEKNKG TFNPVKQVIEIRKLQNDRDYLKMVQEQEKKRESRQK >gi|290781207|gb|ADGP01000020.1| GENE 108 107967 - 108215 116 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968659|ref|ZP_06560197.1| ## NR: gi|290968659|ref|ZP_06560197.1| hypothetical protein HMPREF0889_0298 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0298 [Megasphaera genomosp. type_1 str. 28L] # 1 82 52 133 133 147 100.0 2e-34 MENLYNLKIRFLQEIDTLTANERNVVKYYYFDGVETWDKVAQKMFYSKDHVYTFRRDALQ KLERIKNDQKKKGNNPLFLFLP >gi|290781207|gb|ADGP01000020.1| GENE 109 108365 - 108790 333 141 aa, chain - ## HITS:1 COG:lin1248 KEGG:ns NR:ns ## COG: lin1248 COG4570 # Protein_GI_number: 16800317 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Listeria innocua # 10 127 2 123 145 76 39.0 1e-14 MDISVQNNTIRMTIYTKATAQGRPRFNGYTHRAYDDAKSREWKREIGYEMKQAYKHTPIK TPIALMVYIEIEPPQSWSNRKRERVIHTPITNRPDLDNYIKAIQDSMNGIIYLDDKQIYK LYAVKRYGKENKITLVVKGET >gi|290781207|gb|ADGP01000020.1| GENE 110 108885 - 109268 400 127 aa, chain - ## HITS:1 COG:DR0100 KEGG:ns NR:ns ## COG: DR0100 COG0629 # Protein_GI_number: 15807618 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Deinococcus radiodurans # 1 106 5 114 177 57 34.0 8e-09 MNSIMITGTAGQDAEIRATQTGKMLVRFSLAIYNGKDGQGEYKPSTWLQVVAFDNDLAQT VKKGDRVNISGRLTGDVWNDKNGNKRETWKVIAEAVLPVTKTTGSAVKSGNGFNGLGTQS EECDLPF >gi|290781207|gb|ADGP01000020.1| GENE 111 109265 - 109636 312 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968662|ref|ZP_06560200.1| ## NR: gi|290968662|ref|ZP_06560200.1| hypothetical protein HMPREF0889_0302 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0302 [Megasphaera genomosp. type_1 str. 28L] # 1 123 1 123 123 224 100.0 2e-57 MVRKFTNCVRCGAETKRGARFCEECTERMMDEWQCDRLPTECIVCGKHLSNRQGVFCGYK CEEYLLESFKKYVMERFEWKVKAKPFDDVRTKDIDLEIARKKGMTYGEYMAQKYIKEHGG KRQ >gi|290781207|gb|ADGP01000020.1| GENE 112 109626 - 110144 378 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968663|ref|ZP_06560201.1| ## NR: gi|290968663|ref|ZP_06560201.1| hypothetical protein HMPREF0889_0303 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0303 [Megasphaera genomosp. type_1 str. 28L] # 1 172 1 172 172 321 100.0 1e-86 MINKIISPGRTGRQLKLQVLPVDIILALAALALKDRFSFGKKRIKAFQEHVSKELSATPD GEIWEKILEKEDINLTRLKGTCERMIPVVGGKGQTERQRIYTMLYGSILGILYTLYAAYG FRRTRLEKMTNHFYIYAYGIIHKEYDLYELFECVKEELDVDTMETRRMNNGT >gi|290781207|gb|ADGP01000020.1| GENE 113 110141 - 110587 186 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968664|ref|ZP_06560202.1| ## NR: gi|290968664|ref|ZP_06560202.1| hypothetical protein HMPREF0889_0304 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0304 [Megasphaera genomosp. type_1 str. 28L] # 1 148 18 165 165 280 99.0 3e-74 MQLYKCFQKVSDAEFAAVCLPIIYEMNTIPSISDFIHAWKRYKNAPTPFKQLPAPKIDEK KTAEIIKNLQKFCMEGFKNSREYKISREKIKGRVQAKFKDISDEQIDKYMDLFEWYISQG GKCDGREIIIRQENGEINISLGKKVKDE >gi|290781207|gb|ADGP01000020.1| GENE 114 110676 - 111740 707 354 aa, chain - ## HITS:1 COG:no KEGG:Clole_1479 NR:ns ## KEGG: Clole_1479 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 229 319 144 236 241 75 42.0 4e-12 MTSEGMNMKTRTCFQKLQQIQKILDSELTHVEKLVLIKMSMYDDCYITNKWLSVTLGTSV KTIEKTITALKNKQIITVKRIVKPGTNIQRRQVTNINFDCLNINTTKTQEKAQTLLGEGL KKKDVSKLQTLLGEGLKLDKTADEHAQPSRRRTFQLQTLLGEGLYSSEQDLENGTTKPTT GISNTLSTYNNLNNKYISKKTISYIMYTQTQKTQKRSDFPVNKSTDTTKKKKRFKKPTVE EIRQYCIERGNTIDPEYFYDWYASRGWFLSKGTHMVDWKASVRTWEYKAKKWKEEEEKRK KEEEKRKKEEEKRKGKEIIRLPIGQARREYTQSWYDKDAEIRRAAVMAATKNDK >gi|290781207|gb|ADGP01000020.1| GENE 115 111733 - 112014 363 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968666|ref|ZP_06560204.1| ## NR: gi|290968666|ref|ZP_06560204.1| hypothetical protein HMPREF0889_0306 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0306 [Megasphaera genomosp. type_1 str. 28L] # 1 93 1 93 93 149 100.0 8e-35 MDEEERKTLLEILTADLTATEKLILIYVILCNKEHATSVELGKIAGVSEHSIGSILTRLK KKNVISTMRWWDSVLERIKRTIIVLKLPKKADD >gi|290781207|gb|ADGP01000020.1| GENE 116 112016 - 112288 173 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968667|ref|ZP_06560205.1| ## NR: gi|290968667|ref|ZP_06560205.1| HNH endonuclease domain protein [Megasphaera genomosp. type_1 str. 28L] HNH endonuclease domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 90 1 90 90 159 100.0 4e-38 MNLSNWQKVKRLVIKRDNGLCVLCGALAVDVHHVKFRSQGGKDDVRNCVCLCRKCHDMAH GLHKYISAKEVKAMLMEYLEKKAHIEKKGE >gi|290781207|gb|ADGP01000020.1| GENE 117 112306 - 112797 368 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968668|ref|ZP_06560206.1| ## NR: gi|290968668|ref|ZP_06560206.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 31 163 1 133 133 264 99.0 2e-69 MAMTTTIITDGVKVVQLDKTYLAVPITPHTLNEPITDDVQYKITIAKQKNKRSIQANAYC WSLCEQIAQQLSKDGQYTSKEDVYKSAVKDGGKFDYIVVVEAAKETFINSWTSRGIGWLV DELGACEEIPGSVILLLYYGTSVYNTEEMNRIIQCLNNELEPL >gi|290781207|gb|ADGP01000020.1| GENE 118 112788 - 113447 484 219 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_2192 NR:ns ## KEGG: NT01CX_2192 # Name: not_defined # Def: essential recombination function protein # Organism: C.novyi # Pathway: not_defined # 25 178 5 155 198 120 46.0 5e-26 MAEEKKVTIDNEKQTVNKEIASFKERVLDLQTRLNCPKNRPNDYGGFNYRSCEDILMAVK PLLKELEIILTVEDSLEITEKENYIKATATLLDVHSAQCLKTIAYARETNEKKKMDAAQL TGSASSYARKYALNGLLCIDDNQDPDAFSNEKEKSYSFNQVATSETKQDILKKLMAKATT LDTQNKVSILIDEMFNKKAFAELTLPEARQLLAEVQKWQ >gi|290781207|gb|ADGP01000020.1| GENE 119 113464 - 113952 451 162 aa, chain - ## HITS:1 COG:no KEGG:NGO1128 NR:ns ## KEGG: NGO1128 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae # Pathway: not_defined # 45 162 41 163 163 65 34.0 6e-10 MNLYEINKSILNCVTIESGENVDMETGEIISAEQLNELKMERAEKIKNIALWVKNLTADA TALDNEIKTLTARKKAAKNKIDSLKDWLEFNLKEGEKISEPQYAISWRASERVKVTNVKE LPEEFLKYSEPTPDKTGIKKAIKAGREIKGAELVKSNNLQIK >gi|290781207|gb|ADGP01000020.1| GENE 120 113963 - 114259 510 98 aa, chain - ## HITS:1 COG:no KEGG:MCCL_0956 NR:ns ## KEGG: MCCL_0956 # Name: not_defined # Def: hypothetical protein # Organism: M.caseolyticus # Pathway: not_defined # 3 98 5 100 100 111 60.0 7e-24 MNTTDKIKEWATARGIDTCDPKGQALKLMEEVGELAEGLAKQNKPLVIDSIGDVYVVLVI LSMQLGLDFEDCIETAYNEIKDRKGKVINGVFVKESDL >gi|290781207|gb|ADGP01000020.1| GENE 121 114260 - 114496 336 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968672|ref|ZP_06560210.1| ## NR: gi|290968672|ref|ZP_06560210.1| hypothetical protein HMPREF0889_0312 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0312 [Megasphaera genomosp. type_1 str. 28L] # 1 78 1 78 78 108 100.0 1e-22 MYIKGKEEIKKELNRMMTDMKIHGVIMLIQDVANMNYSDISSEKIKQYKKLYMLAEELKC ALFDEVYTDEDFKKEEDE >gi|290781207|gb|ADGP01000020.1| GENE 122 114510 - 114722 238 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968673|ref|ZP_06560211.1| ## NR: gi|290968673|ref|ZP_06560211.1| hypothetical protein HMPREF0889_0313 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0313 [Megasphaera genomosp. type_1 str. 28L] # 1 55 1 55 70 110 100.0 4e-23 MEKKYDIPDWVTPQMYDINREYARKTYQRIPDWVNARYNRKHYGILPKLRVVGEWLGLLG ICLLLCIGIQ >gi|290781207|gb|ADGP01000020.1| GENE 123 114737 - 115060 272 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968674|ref|ZP_06560212.1| ## NR: gi|290968674|ref|ZP_06560212.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 107 1 107 107 169 100.0 9e-41 MNKKIREKLSDPGLAKKLAKETKKLEKELYLKDLKFAADILDIPIDEEGNTTCTEGEQLR FLVLMYGILQHQTAILESAKNSIFAEIKEMDSKVAEDLIDLNDLKLS >gi|290781207|gb|ADGP01000020.1| GENE 124 115129 - 115452 359 107 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDTPIKLDVETDPKELQKRISFEEWKIRLHKRKLQELKIQQKKIALERLEVAINTFTNGA CFLKLSEYGDVVRIQFEDGRPQIIVNVNSGIEMLYNVLKHDFIGGKE >gi|290781207|gb|ADGP01000020.1| GENE 125 115455 - 116144 103 229 aa, chain - ## HITS:1 COG:no KEGG:LMHCC_1394 NR:ns ## KEGG: LMHCC_1394 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_HCC23 # Pathway: not_defined # 104 218 34 148 151 106 47.0 1e-21 MREITQEEINAKLEAHKLWLDTVSDQGEQAVFKDVLIKEKDFSNLDLHEVIFKNVKCENT DFCRTDLCCAVFKDTKFYAPKFRNAILKYAKFVSCHIVDGTYCNAILDNARFLRTNLFNV SFQYAKLTGTFFAVSTIENTRLNWVIPTYMHGQKVICVQVNTSRENNLISYWADLGIWTT GCFQGTLEELREKVAATHKDNPFLRARYERAINYILEEDKADKEREKEK >gi|290781207|gb|ADGP01000020.1| GENE 126 116164 - 116481 175 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEPNAITLPATLTRKQLAERWHCDVHTIIRFENDGNIRRCPNVAGQVQYPIEEIERCEMP EGQKVTTYDLTKLERRVKQLEKILITKENTLTELKENLTLLVKSL >gi|290781207|gb|ADGP01000020.1| GENE 127 116522 - 116722 213 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968676|ref|ZP_06560214.1| ## NR: gi|290968676|ref|ZP_06560214.1| toxin-antitoxin system, antitoxin component, Xre family [Megasphaera genomosp. type_1 str. 28L] toxin-antitoxin system, antitoxin component, Xre family [Megasphaera genomosp. type_1 str. 28L] # 1 66 1 66 66 119 100.0 7e-26 MNLPLLKGKLREHDKTYADLANVIGKSVTTVNAKINGKIAFNCAEAFQISQWLKLTNEEK TKIFLN >gi|290781207|gb|ADGP01000020.1| GENE 128 116903 - 117583 403 226 aa, chain + ## HITS:1 COG:no KEGG:BL03621 NR:ns ## KEGG: BL03621 # Name: not_defined # Def: phage-like protein # Organism: B.licheniformis # Pathway: not_defined # 10 222 3 207 212 143 40.0 4e-33 MDKKEFNKMVGKRIKKQRKQNNMTLKDIAVKLGVTESTVQRYETGNISNVSIEMLQKIGK ILLVSPAFLLGWDSAEKVVSDLEAHKHKFLDASISAGYPFTVDGVSSLPLVSIPDVFLGK YATNKNIVVMKVNGDSMNKIIPNGSFIAVKTNIDVLSVSNGDIVVANVDGAENGYTIKHI YKDAINNRVILRPNSTNLAYTDIVITLTDTQRLYIVGKVVAYNVLL >gi|290781207|gb|ADGP01000020.1| GENE 129 117680 - 118753 381 357 aa, chain + ## HITS:1 COG:BH3551 KEGG:ns NR:ns ## COG: BH3551 COG0582 # Protein_GI_number: 15616113 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus halodurans # 10 346 1 361 378 64 24.0 4e-10 MNKAENFKFLEPIQRGKKGLWCQRLAYKDKHGKWKQTSKSGFARKRDITTAVKNEMLKEL SGLLSLDNSMDSITLKDFSELVIADKKNEYALNTIITYRNAINRLPTLKDMPIKEITYAH CIKEFATLEQAKGNTVFSTVTVLKSFFKQAMLYKVIPSTPLANYSYKPGHKGVSRLRIFT EEEMNTLLDYYKGKDLQTWIQLCFLRYCGLRLGEMSAIRWCSIQGNMLTVDRQYSNISGK FAFRKLKTKNSYRTIPIPDTLLNAIQVYKKRYPPFISTARVVQRNIALNISIKKIYPCHS PHDFRHTYATNLLARGVNLRTVASLLGDTITTVEKTYIHYSEEMRKNAVIKLNEIFG >gi|290781207|gb|ADGP01000020.1| GENE 130 119027 - 120718 1666 563 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1526 NR:ns ## KEGG: Vpar_1526 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 562 1 579 579 241 30.0 6e-62 MSSLLPYAIIIGIVVIFFGVCYVVFSGNSGKKEMGNGEVLNRNDNQFRRIKQNGITVTDQ RVKTSVAHERHELSQNTAWGTTQGETVRRVRQTGGTAVHNKRHAVRDLEATYVLPKEDVE FLAAQEKKEQERSREENLSTSRREKEDLGAVVAADLAEKQAVRAARAKTAVQHVLAANEK QREIEKTQIINRQDMRRILQDGRHSETAASRHTENTPGDQVHPQATVADMRGQQPSPAFT AAEISPVIQQCVDDFLQHFGKATAKRKALVTEITVAAFTYVGCRSDRERQELIEPLLAHE ALHNMQKAYVAHPQEEVKEIALMAFKDAVRKTAATTRHFIAVEALKVLPYLSLPHYKILA ILFTFLYSRNTRNVDKESFCSYLDSHVLPFQAGLPMEKAYYQQLGYYQCTVTENKETRFA EILRGSYPLLFEYRGMTPLELQDILQGQSIPAEYVVTSFNSDLIKLALIDESMAKAFFNR IHIQDRRMQQRLLQAVKSRPVDFSGEAALNIMENISPVLADLSDLWDSSQLRVSTLSLLG LYLAHGYIHSVTGEEVDLSRWFE >gi|290781207|gb|ADGP01000020.1| GENE 131 120940 - 121941 514 333 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968680|ref|ZP_06560218.1| ## NR: gi|290968680|ref|ZP_06560218.1| putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] putative lipoprotein [Megasphaera genomosp. type_1 str. 28L] # 1 333 9 341 341 658 100.0 0 MIVSFFCVTSACGATYIDTSGLPDAQILSYLQVTRGLQVFPEKRLYPQREITYNELAKLL TDVDGNIPGVTDSGSNSREILQKNGIFPLKIAGNAVVTRQNLQIILQRWQQFNGRVGGKK MPALNGKSVPVTRYEAIRSVYYALYGTPMPSPSGWQDEERVWQKLLGYYGSPANFFANGI IYREQNAVVIGVYPEKREHLEAIIPAAWVRAGNVRIRSVVYSQQEYLTQMKKVKYILKQC GDGEKYRALVPNYERQQLILTVSQPLRVETRKVLQKNILPHMLYVVAAGQGNNPQYKENL RREKNRLRFVPYVPGLSPEMEQAIDDFQYEVMR >gi|290781207|gb|ADGP01000020.1| GENE 132 121962 - 123113 869 383 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968681|ref|ZP_06560219.1| ## NR: gi|290968681|ref|ZP_06560219.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 383 1 383 383 671 100.0 0 MNFVIRRVTAVLVLVVLTASVEAAGAVGRHALSPTSTAVTVQARQSPGLRVSGGKPKTAR QPLTREELAGLLAQMTGIQTPQNATYKGVHARPTKSAVVLVTGRHSMTGFKPGYLRPQRY VSRQEFAVVTYNYMKVNNLPLTGTVSLYKDDAEIADGAKKAVYALTAQHIMQGENQRFYP HAIVSRGAAVRMLQRVYERQQQKDKTVSMTAVPAEKAALHEARRAVLPVHKERQLASVAP VFSSREAEQQVFGYLRTVYGSIGAFAADGVLYWQGNVLHIGCKSAVKRAALEKLLQHDEY LQPIVAVKSIRYSIMDYQQLTDRAKTVYLSEMPQGTVIKTGIDYTTETIVLTVPVMKKSV RAALQEAFGANVRCIVRAYGSKV >gi|290781207|gb|ADGP01000020.1| GENE 133 123209 - 124186 887 325 aa, chain - ## HITS:1 COG:jhp0661 KEGG:ns NR:ns ## COG: jhp0661 COG0252 # Protein_GI_number: 15611728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Helicobacter pylori J99 # 4 325 8 332 332 258 42.0 2e-68 MKHIHIIACGGTIAGIGERAESLTQYQAGKLAWQEMVQAVPAIRKTAVLTGEQFCNLDSA DMTEALWIKLAGRIRTVLQKDSCDGVVVTHGTDTLEETAYFLNLTVHTDKPIILTGAMRP ATALSADGPLNILAAVQTAAVPEAGKYGVLVVMNNRICAARFVEKTDTAQVDSFQCRQQG YVGVVQENRPYFYQRPLRLHTYESQLILPITDELPYVPIVYCHVGMDPNLFSVLAAAGAP AMVLVGLGHGRMPQGVYTKIEALQKQGVLFVRTSRVSGGTVTFLQEYAGCLWGDSLTPQK AKILLQLALLQGADSTRIQHLLQTH >gi|290781207|gb|ADGP01000020.1| GENE 134 124376 - 125113 900 245 aa, chain - ## HITS:1 COG:BS_yitV KEGG:ns NR:ns ## COG: BS_yitV COG1073 # Protein_GI_number: 16078179 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Bacillus subtilis # 1 239 1 252 255 79 26.0 7e-15 MIEVTKHYMEGFPCLHVSCGERPKGVILFYHGWSSNKEKQEVRARLLAAYGYDVIIPDAV NHGERGTLDYDSKRMYGNFWQTVFQSFREVPLWLKYIIHWNRRVPKILMGHSMGAITALG IMSFFDEFCAAVAINGTGWWAEADRLFHQDLDIPPFKGQHALEMNFRVTDPYKHAHLLGG RAILALNGAADTTVNPLSQKKYMEELSHKEEVTSEHILYEGVGHYVTTNMMGDAIAWLER NIPRY >gi|290781207|gb|ADGP01000020.1| GENE 135 125140 - 125571 169 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968684|ref|ZP_06560222.1| ## NR: gi|290968684|ref|ZP_06560222.1| hypothetical protein HMPREF0889_0324 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0324 [Megasphaera genomosp. type_1 str. 28L] # 1 143 1 143 143 221 100.0 1e-56 MRIADSAISLAGNFKIIFPIILFAVFSLPDVLRRKRTYKKRRRSRSFPIPARQEKKKRDP LIAETKEKEIRQENTASFPASIVGPDKKSATIASPMRSSARRRPVSGDGWHEVAPEAQDL YAGIIWSEILQPPLAIRSRQHRK >gi|290781207|gb|ADGP01000020.1| GENE 136 125580 - 126614 1449 344 aa, chain - ## HITS:1 COG:BS_yqfA KEGG:ns NR:ns ## COG: BS_yqfA COG4864 # Protein_GI_number: 16079592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 10 317 12 319 331 419 73.0 1e-117 MFIVFPGFCIVVAILVISAFFHFVPLGLWISAMAAGVSVGIGNLVGMRLRRVVPSKIILP LVKANKAGLNMNVNQLEAHYLAGGDVDHVVDALIAAHRAQMELTFERACAIDLAGRDVLE AVQMSVNPKVIETPFISAVAQNGIELKVRARVTVRANIERLVGGAGEATVIARVGEGIVT SVGSAADHAMVLENPDEISKTVLSKGLDAGTAFEILSIDIADIDVGRNIGARLQTDQAEA DKQIAQAKAEERRAMAVAKEQEMQAYTQEMQAKVVEAQAEVPLAMAIALKSGNLGVMDYY QMKNIMADTQMRDAVAKAGIPKHQHRQVGDSDTGHGESSSPEDK >gi|290781207|gb|ADGP01000020.1| GENE 137 126634 - 127932 961 432 aa, chain - ## HITS:1 COG:BH1356 KEGG:ns NR:ns ## COG: BH1356 COG1030 # Protein_GI_number: 15613919 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane-bound serine protease (ClpP class) # Organism: Bacillus halodurans # 28 429 35 445 445 135 25.0 2e-31 MKRLLYGWILFFCFCMGTGGGTTVAAKDNAAVRIVHVAGQLAESRQVLLRRTLTQAATEG APAVVVVLSVTSGQERQAQQVSAVLAASSVPTIAYVRGANSAAGTAIALSCRHIIMAPGG RLGRYATEGDTQAWRSLFENNAAATGRNRLVAAAMADATVKVPNYTASSAYTLTLTPDRA QTLGFSEGTATTVEEALQFFSLGRFRTVDVTVTPGDQLTGILQNVYVRMVLVVLIMMAIL AEIKLAGIGAGMAVAVVAGIGLYVSGASTMNFDFRVMAAFMGSILCLGIELVIPGSGVFG VTGVILLYGSLFYFLGANVAAVYFLAACTVAAGVVFFLLARWLPHSRGLEKLVLHQRQQT AYGYRSQKDYSSYVSACGRTITVLRPAGIIRVDGERIDAVSTGMFIERDVAVRVLRVEGG RVVVEPLPERSL >gi|290781207|gb|ADGP01000020.1| GENE 138 127948 - 128361 506 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968687|ref|ZP_06560225.1| ## NR: gi|290968687|ref|ZP_06560225.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 137 1 137 137 247 100.0 2e-64 MTLSLFWSRYILELREQHLRAIDEKYQYVIAGERWNWLLAKIPESEQIRILRGHNHGDTA WTCKVWLEHMIEWIRENKSTAVYEAVLDKIEIIKMKTVEELEKQAAYGLSPEELRSFQDA GYFQWISEKTHDDVRSD >gi|290781207|gb|ADGP01000020.1| GENE 139 128445 - 129035 737 196 aa, chain - ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 2 194 4 197 199 186 51.0 2e-47 MSHFFAILSRMKLIRRWSLMYNRRSENVQEHALETAVLAYHLCVLHNTYFHGALNGEHAA VLAMYHDASEVFTGDMPTPVKYFNSRMRQTYGTVEEQARKRLLSALPAELQAGYKPIICY PEEEPEWPLVKAADTLSAYLKCLQEVADGNREFTEAFHTLEGQLQALNMPEITLFLETYA PSFSLSLDQMHANSDG >gi|290781207|gb|ADGP01000020.1| GENE 140 129045 - 130034 1296 329 aa, chain - ## HITS:1 COG:BH2870 KEGG:ns NR:ns ## COG: BH2870 COG0180 # Protein_GI_number: 15615433 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Bacillus halodurans # 4 329 5 328 330 378 57.0 1e-104 MAVIFSGIQPSGNLTLGNYLGALRNFTKMQEQNECYYCVVNQHAITVHQDPALLHRRTRE LAAIYLAAGLDPEKAALFVQSEVPQHAQLGWIMTTLSYVGELERMTQYKDKAAKQGDSIP AGLLTYPPLMAADILLYQTNFVPVGDDQKQHLEITRDLAQRFNRLYQEEVFTIPEIYLGQ GGTRVMSLQEPTKKMSKSDDNTMATIYVLDAPKDIEKKIKRAQTDSENSVHYDAETKPGI ANLMDIYAAVTDTDHAAVEREFSGQGYGQFKKSVAAAVIAALEPIQKRYAELIDNPVLDE ILDQGAVKARETASRTYDKVVQVMGLDRK >gi|290781207|gb|ADGP01000020.1| GENE 141 130494 - 131756 1472 420 aa, chain + ## HITS:1 COG:lin0859 KEGG:ns NR:ns ## COG: lin0859 COG0513 # Protein_GI_number: 16799933 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Listeria innocua # 3 381 2 370 516 309 41.0 8e-84 MNTTFQTLGVSPILCELLKKQGIAVPTQVQEKALPALFQGRDILGQAQTGTGKTLAFLLP ALQQIHPDQHQEQVLILAPTRELAKQITAVATDLAAALHIDILNIIGGQTIENQLQKLQR HPQMIIGTPGRLLDHCRRHSLNLTGVGRIIVDEADQLLQTGFLEDVDTLLGMTPKRRQLL FFSATVPDKIKSLAKKHMHNPFVFHVLEGSSIALETIEQRIYMIKEEQKFSFLCKLLHEM NPYLSVIFCNTKERTSILAGQLIRAGFAVSELHGDLSQGRRTQVLRDFSKAKTQLLVATD IAARGLDIAGITHVFNYDVPHDIDYYIHRIGRTGRAGNEGLAVTLATAADEDWVRRIEHA IRATITKYTASGKIQVKQAPTAPKKKRIYKDKLPVATYQATKEKRHKTLHKGGNNRRRRS >gi|290781207|gb|ADGP01000020.1| GENE 142 131767 - 132453 446 228 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968691|ref|ZP_06560229.1| ## NR: gi|290968691|ref|ZP_06560229.1| hypothetical protein HMPREF0889_0332 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0332 [Megasphaera genomosp. type_1 str. 28L] # 1 228 1 228 228 413 100.0 1e-114 MNRTILIALCAVTALCCGGCDNITYSGKPVSFPSVQESQNTPKNSPQNDRARETEQTTKD IAYTDSRHKTKHPRPLPAKQVPQTTGENPPDEPERPEINHTRIITGLGNTARNWNRVFGM PYQQGTALKVYRNGTCKVTFTQGQATTITLNPQVGEIPALTALIPKDSRKRGTRKRDIGV TAMETQSWYSPALKKALPATKGNFTIIKTRIKNDDTNIVITCDNSIQK >gi|290781207|gb|ADGP01000020.1| GENE 143 132565 - 133152 673 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] # 1 195 1 196 196 263 65 3e-69 MATRREARFKQCRRFGLNVYGHPKALKRVKKEQRQKKMSEYGTQLLEKQKLRAYYNLLER QFVRYYDKAKKMDGVTGENMLKLLECRLDNIVYRIGFANSIRQARQMVNHGHILVNGKRC DIPSAHVKVGSVLTLKEASRDNEMYKKSFQELKTFDVPYIEKNFDGFEGTLTRMPERDEI PVEINETLIVELYSK >gi|290781207|gb|ADGP01000020.1| GENE 144 133654 - 135258 2036 534 aa, chain - ## HITS:1 COG:BB0604 KEGG:ns NR:ns ## COG: BB0604 COG1620 # Protein_GI_number: 15594949 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Borrelia burgdorferi # 1 472 1 465 500 273 38.0 8e-73 MNALDVFLSVLPILWLLIGLTVLKMPAWKACSIAAIISFIVAVGPFGKVVIVMLSGALEG VALAIWPILLVITAAIFTYNLVVHTKAMETIKTMLTSVSPDKRILALLLAWGFGAFMEGM AGFGTAVAIPAAMMVALGFDPLKSILACLVANSVPTTFGSIGIPTTTLASLTGLEPTQLG TFISTQLFVLNVISPFFVVGIICGAKSLKGVFFPTLIAGLALAVPELVINLAVGPELSVM ISSIIVMGAIIVCAKIFKPNDPDYRVDAEVRPVSTSEGITAAMPFILIFILLLVTSKLFP FINGPLSSIKTAVHIYLGAHAKPYTFVWIATPGIMIFISAFLGGAYQKAKGGEMLSVLGT TFKNLKFTYVTIIAVVVTAKLMTYSGMTANLASALVGVTGTAYPAFAPFVGAIGGFITGS GTNSNVLFGPLQTAAAAKLMPGNAGLASWLAAGSSGAAGTGKMFSPQSIAIGIGAVAPAL EIFIKDKNIESGKAEQLRQSIKANVIMQNVAKYFVLYVIISGVICIFGMNIFLH >gi|290781207|gb|ADGP01000020.1| GENE 145 135980 - 136630 473 216 aa, chain + ## HITS:1 COG:lin2059 KEGG:ns NR:ns ## COG: lin2059 COG3601 # Protein_GI_number: 16801125 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 32 166 34 175 203 59 30.0 4e-09 MNFRTHKITVISMFCALSLLAVICIRIPIFLPFLTYSPKDALITIGGLIFGPLTALIISL ITAFLEMITVSDTGILGCIMNFLASSAFACIVTYTYRRYHTKRGAVVGLVFGTVVMTAFM LLWNFCLAPIYMGCSREAVVKLMLPAFLPFNIIKGVVNSVLIMVLYKPVIMTLRKRYTFL QQPTAPSPITERITYLLLILILLITGITYFIARHHM >gi|290781207|gb|ADGP01000020.1| GENE 146 136828 - 139626 3137 932 aa, chain - ## HITS:1 COG:BS_ileS KEGG:ns NR:ns ## COG: BS_ileS COG0060 # Protein_GI_number: 16078607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Bacillus subtilis # 1 931 1 917 921 942 49.0 0 MDYGKTLHLPETAFPMRGNLPKREPEFLKFWQEQDVYHKRLKKRAGGPKFILHDGPPYAN GKLHIGHALNKVLKDIVLKYKTQQGFYTKYVPGWDTHGLPIEHAVIKNTGLNRHEMTPLE LRKKCRDYALEQVEIQKNDFIRFGVLGEWEHPYLTLQHHIEVEQIGVFGKMAKNGHIYKG KKTVYWCPHCETALAEAEIEYKEDKSFSIFVKFKAVDVNCHMPKDADPDKVFALIWTTTP WTIPCNLAISANADFTYVWVKVAEEYLLMAQERVDEVMKAADIDTYEILPERMQGKQLEG FIFQHPFYERKAPILLGDHVTLDAGTGLVHTAPDHGQDDFEVCMKYSAWDIKPLGTVDET GRYTDKVPGYEGVFVFDNNVPVIKKLAAIDALFAKSTFRHQYPHCWRCKEPIIYRATEQW FSSVDGYRQEALQAIDQVQWIPSWGHDRIYNMIHDRGDWCISRQRVWGVPIPIFYCKHCG EYIINDETVAHLQKIFAEEGSDAWWAHSEAELLPEGFTCPACGSHEFRKESDIMDVWFDS GCTHQGVLKHDPDLSYPCDLYLEGSDQHRGWFNSSLLTSVATNGYAPYKAVLTHGFTVDG EGRKMSKSVGNTVAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSDVYRKIRNT FRYLLGSLADFDPAKDSVPYEALTELDKWALSRLEQVRESVTESYETYQFHVMYHTIHNF CTVDLSAMYLDVIKDRLYTERQDAPVRRSAQTTIYRILTTLVKIVAPVLSFTAEEVWQHM PETVDKEESVHLTDWPTAHPEYRNADLEARWQEFLSYRSDLMRVLEGARQAKTIGHALDA AVTVYAEGETYDFLATWKDRLATLLIVSEATVVKGTAPENAVPGEEHEDMKIVVTASTHV KCERCWIHSESVGKDERHPTLCARCAAVLTQE >gi|290781207|gb|ADGP01000020.1| GENE 147 139935 - 141338 701 467 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 4 444 6 445 456 274 35 2e-72 MMPILDYWDGVLYYPVLIVILTIAGVYFTGKTGFVQLRMFKESIRVVMEKPAKEGSVSSF QALMVSTASRVGTGNIIGVSTAICLGGPGAVFWMWLLALIGGSTAFIESTLAQIYKRRDI YGGSFGGPAYYISVALKKRWIGVIFAVALILTYAGGFNLLCSYNMQSTFIAYSFYNPDTT PWIIGAIFAAIVAYCVLGGGKRIIKITSVLVPVMGAVYIIAAIIVILMNITALPHVFSVI FADAFDFKSMLGGVSGSCLIYGIKRGLYSNEAGIGSAPNAAAAADVSHPVKQGLVQMLSV FIDTILVCSATAFLGLFSGVPITADAAGALYVQQAATSVYGHFGPLLITVCMLLFGFSTL IGNLYYVDNCIRFIHKKGPSRLFVWWFRAACVAVIFIGSAMSMAAVWDIADILMAIMCII NIPSCVVLGNVAVKALKDYARQKKEGKNPVFKAADVGIEEHTVEFWK >gi|290781207|gb|ADGP01000020.1| GENE 148 141773 - 142501 772 242 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 1 236 4 242 245 305 57.0 6e-83 MSPIEKFQNLLSSSQNIVFFGGAGVSTESGIPDFRSTDGLYNQTYQYPPETILSHSFYRS QPHEFYRFYHDKMLCLTAQPNAAHYALAALEKEGKLKAVITQNIDGLHQKAGSRNVLELH GSIHRNFCESCGKFFAASYMADAPDIPRCDVCGGTIKPDVVLYEEGLDESVLQAALQYIR QADMLIIGGTSLVVYPAAGLVRYYRGHKLVLINKSTTDMDTAADLILRYPIGETFEKAGF AR >gi|290781207|gb|ADGP01000020.1| GENE 149 142638 - 145010 2712 790 aa, chain - ## HITS:1 COG:BS_yshD KEGG:ns NR:ns ## COG: BS_yshD COG1193 # Protein_GI_number: 16079910 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Bacillus subtilis # 1 790 1 785 785 433 37.0 1e-121 MNTRSMRILGFSQIKQQLVRLAPSSLSKEIARRLRPSPIQEEVIRRLQDTEEAVQYRLQE GPIDYGRLTDIRPALAKAARNIVPEKAECIAIWHNIQAYMIIKEKLAVPDTPYVQLSKRA ASIADFTALQKNFSRVFDEDLQIRDTASPELFRLRTRIATLENRTKRMITEILQHKEYQK YFQEQLFTVRNNRYVIPIKQEYRRAFPGIVHDTSASGLTLYVEPLAMVDGNNELQTVRMG EEKELERIFARLTEAIKAQDEALLLATRAAGQVEFCFAKAALAEKMAAIRPRMGEAGVIR LIQARHPLLSPDKVVPNTLRLGDEYRVLLITGSNTGGKTVAMKTLGLQVLMHQAGLFIPA AAESVLAVFREVFSDIGDEQDLSQNLSTFSGHIKQLVYILRHCREKDLVLIDELGSGTDP TEGSAIAIAILDALKTRGADVMVTTHYNDLKNYAYETAGVENAHVEFDDKTLQPTYKLRI GTAGSSHAFSISARLGMPAEVLQFAEKIRKQTSHVDMEHILAKLNRQEKDLELREIETAQ RLREITRQQAVLQREREEAAKERSLLLTAARQDAREAKRKLRIESEQIIKQLKQSKKKSA PEELAAVIQRTRQNIRDLSLPGSNEGGRVPVKSEELQNGDIVFVNSLQEAGKVVSVQGKN ITAVVGTLTVRVKAKDVSLPTAAEIQEEKRREQKQTLQTATHTCKPVTRIATEVNVIGKT YADALPDIERFLDQALGAGFSPVKIIHGKGSGALRRQIHGYLADLPFVKDFKTAEEGEGG GAGVTLVYFK >gi|290781207|gb|ADGP01000020.1| GENE 150 145023 - 147428 1883 801 aa, chain - ## HITS:1 COG:MA0538 KEGG:ns NR:ns ## COG: MA0538 COG0826 # Protein_GI_number: 20089427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Methanosarcina acetivorans str.C2A # 3 800 7 854 855 394 33.0 1e-109 MVELLAPAGSPEQVRVAVEAGADAVYLGGKAFNARSFAHNFSRDEIQQAVHWAHLFGVRI YVTVNIIVADTELAAVEEYIKFLDQVGADGIIVQDLAVAAIARKIAPALPLHGSTQMTVS DSYGVQQLANAGFSQVVLARELTLQEIKRICRKAPIAVEVFVHGASCMSYSGQCLMSSFI GGRSGNRGACAQPCRLPYQLVRGTQAVLPQPAYILSLKDLNALAEIKELAAAGVSSFKIE GRMKDSRYVQAAVTAYRQALTACRSSSAIAADLLQQAHCKVHEGFHRAEQADFLRGRVGR QTVTEKPGHNQGERIGTVSKVRGKDLFIQATAAVQAGDCVGIMQGGNFSFLTTVRACIPL KQQGRYKLQVGKEGAIPGSLYRMQSKKEPCTARRTRTIPIYMYLETGKNGQLVLRVWDEN GHVVTAASTYIPVAATTCPTDRDRVIKQMRRLGDTPFSLAAVTMWDERYMIPVSVLNQLR RQGIQALQKEIIHSYRRPASRHGDCSVAETYERKLPVEQGGTLPALYVRCDTPETAAAAV QAGADTIIFGGERYGVTPWTRAEWEQVTAMTTARQIPLWAAMPRVLREKDKPQLQREWEM IVQFPVQGVYIGALGEFAWVKETAPTMPLRADWSLNIFNTTAARVYAGWRCQSVTVSPEC TIKQIRCMIQQGAPPLEVLVQGRIEMMITEFSPVEAFGMKSQREGSGPRYIKDRKQQQFP LVTDPYGRTHILNTRELSMLPYIDLLKDCGIAAIRIDARGESPRRVQELCRQYKRALEGT TSAVAKEDIRVTRGHFFHGIG >gi|290781207|gb|ADGP01000020.1| GENE 151 147587 - 148054 643 155 aa, chain - ## HITS:1 COG:Cgl2024 KEGG:ns NR:ns ## COG: Cgl2024 COG3599 # Protein_GI_number: 19553274 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Corynebacterium glutamicum # 7 136 8 142 263 58 28.0 4e-09 MNSDKLLEDLESAILNAAKMPFTNKKMIEEEEILQIIDDLKEAMPAELDQSKRIIAERDK ILSDAQHHADSMVAQAKDYIAKLTEESELVRQAQERANQIILQANNSSEELKNSSIRYAG DVLKYVESTLEKTLSSIQQNRESLLKSNKKEEEQS >gi|290781207|gb|ADGP01000020.1| GENE 152 148066 - 148611 385 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 17 175 1 159 164 152 49 8e-36 MEKIREFLLFAIAGKELNVRIGICPGSFDPVTNGHIDIFERGSKLVDKLIIAVFENPTKK PLFTMKEREELLLETTKHIHNVEVVSFQGLLNEYAIAHGATIIIRGLRALSDFEYEFQRA LLMKKVEPKIETVFIMTSTNYSYISSTGIRELACFGGKLDGMVPAYVEKKLKERFKSKYE A >gi|290781207|gb|ADGP01000020.1| GENE 153 148559 - 149131 275 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 7 188 13 197 199 110 36 5e-23 MRVGDWVRIIAGSVRGRKLKTPSGRLTRPTLDRTRESVFNILAATSLRGASVLDVFAGTG ALGLEALSRGAVSCVFIDQATQELLRKNIEVCGFDAQCEVIAGPARRALARLQGRQFQFI FADPPYNKNLVNNTIAFIYQYKLLAFGGLLLMEHSKEEPIDDNPLYEIIREKAYGKDTRI SFIRYRREGA >gi|290781207|gb|ADGP01000020.1| GENE 154 149196 - 149813 815 205 aa, chain - ## HITS:1 COG:FN0537 KEGG:ns NR:ns ## COG: FN0537 COG0344 # Protein_GI_number: 19703872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 7 200 6 193 194 134 44.0 9e-32 MTVGIGLLVAAYIIGSFPSGLIIGKLFFGKDPRQYGSHNTGATNSYRVFGKAGGSAVLLA DLCKGMIGVYLGQMAGQAAGTFPEVYGMILGGLLAIVGHSCSVFLRFKGGKGVATGLGVI LFLAPLPTIVVFGIWAIIVAATRLVSLGSIIGAVATPILMYVFGSPYPVIIFGILAAILV IVRHKENIVRLWQGKELEVKRLPKE >gi|290781207|gb|ADGP01000020.1| GENE 155 149810 - 151141 1800 443 aa, chain - ## HITS:1 COG:BS_yphC KEGG:ns NR:ns ## COG: BS_yphC COG1160 # Protein_GI_number: 16079341 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus subtilis # 1 438 1 436 436 518 56.0 1e-147 MYKPLVAVVGRPNVGKSTLFNAIVKKRIAIVEDIPGVTRDRIYFDAEWLGREFTMIDTGG IEFVDAADRIFTDMRYQAELAIREADVILFVVDGKTGMQPQDEEVANILRTCGKPVLLVV NKIDSVEQEMNMYEFYALGMGDPIGVSAVNLMNLGDLLDSVLQHIQHLPTPEEREDTIHI ALVGRPNVGKSSMTNALLGQERVIVSNVPGTTRDSIDTYWTYNDTSFVLIDTAGMRRKAK VDIPVERYSVVRALRAVDRSDVAVLVLDAQDGVTEQDKKIAGYIHEAGKGCIIVVNKWDL IDKDSKTSQAFEEDIRRELAFLQYAPILFASALTKQRVNRLADMVKFVAEQQHMRVSTSV LNELLEDAQLTNPPPAKGGKLLRIYYMTQASVQPPTFILFVNEPRLMHFSYVRFLENRLR ETFGFEGTPIRLILRGKREADAQ >gi|290781207|gb|ADGP01000020.1| GENE 156 151262 - 153169 1757 635 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 634 1 626 632 681 54 0.0 MKVEVAGACGFCYGVRRAVDMACQATEGTRTLGPIIHNPQVVETLATQGVAPVQSLQEVD NGSTVLIRSHGVGPQVYEEAKEKHVKIVDATCPHVKKAQQDAKKIVFAEKKLVIIGEKSH PEVISISQWGVNRAIIIDKEEEAQEIPFCEDMGVVVQTTFSQEKFKRIVRILQTKTNHLE THMTICTATQQRQEAAIALARRVDAMIVVGGKNSANTGRLAQVCREQDCPTYHVETAREI NPSWFHGMSYIGITAGASTPDWIIQEVVKIMENLQAEGTEVMSEELLDQYDYEENLKKGD VVEGKVVSVTDDAAFVSIGTKAEAILPKKEIAVPAPEKAGDVVHVGDEFKVVIASTVKED STIVVSLVKMQKEADWEEVRQAYENDQLIECVGKETNKAGLVVSIKSLRGFIPLSQGDVH FVKSLDNLVGQTFQVKIIDLDEHKNRLVLSRKAVLEVEREAKRAEALEHIEENTEMDGTV VKIMPYGAFVDLGGVEGLLHISDISWKRIGAVEDVLSVGDTVHVLVQQFDRERNRISLSM KALQKNPWIAAIEKFAVGDVVEGEVKKILNIGAILAIDPEIQGLLHISALTEQRGAAVKD LVAIGDKMQVKIIKIDPDKHKVALSVLAIRNEEEE >gi|290781207|gb|ADGP01000020.1| GENE 157 153166 - 153780 565 204 aa, chain - ## HITS:1 COG:BH1635 KEGG:ns NR:ns ## COG: BH1635 COG0204 # Protein_GI_number: 15614198 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Bacillus halodurans # 16 168 14 162 195 106 38.0 2e-23 MRKYTDPILRVLFNLYTYTFLGMKVYGAEKVPETGPVIMIFNHESYFDPPLLGTAVRNRF IHFMAKAELFKNPVMRLIFKYMKTFPVHRGRIDRQAIAESFRILKAGEILGIFPEGTRHK KGYLGKFHDGFAGIAIKTGVPVVPVAIINSRSLPKKTGPIKVVFGDPVLPPEGKAGDKVL VAKFCEDMRNTLLQMVIDNGGKEV >gi|290781207|gb|ADGP01000020.1| GENE 158 153777 - 154448 745 223 aa, chain - ## HITS:1 COG:SP1603 KEGG:ns NR:ns ## COG: SP1603 COG0283 # Protein_GI_number: 15901443 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 221 1 222 223 192 46.0 3e-49 MKKLTVAIDGPAGAGKSSVAKLVASQLHYLYIDTGAMYRAVAWLTGEKGIAADDEAAIRQ LTDTMQIRMQAAAQGCRIWINEREVTEEIRSPEVSARVSAIAALPAVRYKLVQLQRQLAQ PGGVILDGRDIGTVVLPHADIKIFLTASVQARARRRFLEMQEKGMPTTLAQVEENIASRD YQDSHREHSPLRQAPDAVFIDNSEWNLQETAGYIQRYIEEKQG >gi|290781207|gb|ADGP01000020.1| GENE 159 154445 - 155686 1204 413 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 15 404 2 388 393 328 43.0 8e-90 MQRVFVIGGGAAGCMAAWAASRRGAVVELFEKNDIVGKKMGITGKGRCNLTNSCPMDAFI AKTPGNGRFLHSAYEQFTNRDLCSLLRQWGMATKEERGGRIFPQSDSAVAVRKLWYHKLL QAGVTIHLQEEVQHIAYRDSFFVITTANGVYEGDACVIATGGVSYPTTGSTGDGHRFAAA LGHTVTPLKPSLIALVTQEEWPKQLAGLTLKNVEASIWKNGKPTARQFGEMVCTHTGISG PIILQLSSVMAHHKKMAFPIDIRLNLKPALRPEQLEQRIWRELQAHIRQDAKNALKTVLP QRLLAVVLAAAHISQETVAHQITKEQRRRLVTALQALPLTAVCTRPIEEAIVTAGGVEVK EINPKTMESKYVPGLYFAGEVLDVDAFTGGYNLQAAFSTGYVAGSAAAQEDEA >gi|290781207|gb|ADGP01000020.1| GENE 160 155702 - 156418 1027 238 aa, chain - ## HITS:1 COG:BH1576 KEGG:ns NR:ns ## COG: BH1576 COG1187 # Protein_GI_number: 15614139 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Bacillus halodurans # 1 234 1 233 242 220 50.0 2e-57 MERLQKVMSNCGVASRRASEQMILDGRVRVNGVIVRELGTKVKPEQDIILVDGRRLEIQP KHYYLFNKPKGVITTCSDEQGRPTVLDYFKRIKDRIYAIGRLDQNTEGLLLMTNDGELAN ILMHPGHMVDKTYEVKIKGHIADAVLQQLADGVLLSDGMTAPADVYYVGYDTHTGITSLE ITIHEGKNRQVRRMMEHFGYQVHNLRRVQYAFLTLSGVKRGAYRALTREEVMELYKFK >gi|290781207|gb|ADGP01000020.1| GENE 161 156390 - 157028 509 212 aa, chain - ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 10 173 13 178 202 99 37.0 4e-21 MEIRLPYSTEEKKQENEAAILEALLFLSGEPLADEKIRAHTGWSLQKIERAARKLQDTLQ AYGSGLTVLRAAGGYQLVTDAKLHEKIRWVRTEQRELTNAALEVLSIIAFKQPVIRADIE KLRGVSSERVIGTLLQQGLILEVGRKETPGRPIMYGTSPFFLTCMGVESMQELTRQVGTF TDNATGVKHIKNNILQTANEESGNGKIAKSNE >gi|290781207|gb|ADGP01000020.1| GENE 162 156979 - 157710 674 243 aa, chain - ## HITS:1 COG:BS_ypuG KEGG:ns NR:ns ## COG: BS_ypuG COG1354 # Protein_GI_number: 16079379 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 216 1 225 251 116 34.0 5e-26 MEECRYRVSDFEGPLDLLLYLIEKNKVDIYNIPIVDITDQFNEYVRELDGFDINYASKFF VMAATLLQIKSRFLLPKSGAAEAAPEEDLQAELVRQLVEYKQMKQAAVQVRQFWRQRSLM LAREGTPLLQQSVFSGTITVQSLYTAFCTVYEASARKKTPVVQLQREIYSVEESMRRIIG YLRDIGGPVTVLSVFRLCRSKVELIVVFLAVLELLKCGQCRTVCVGKDGNTVALQYGGEE TGK >gi|290781207|gb|ADGP01000020.1| GENE 163 157941 - 158204 144 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAAPRIELGMKVLQTSALPLGYAAVWSGKRGSNSRPPPWQGGALPLSYFRKTIGAQGRN RTADTGIFSPLLYRLSYLSKYGDPDRI >gi|290781207|gb|ADGP01000020.1| GENE 164 158073 - 158312 166 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIECFLFEAHKCPEEYDTAPWCSGSTCRPVTAKIVGSNPIGVAIFAQVAQSVEQGTENPR VGGSIPSLSTNCFAEVAQW >gi|290781207|gb|ADGP01000020.1| GENE 165 158457 - 159992 2424 511 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 9 511 11 514 514 553 66.0 1e-157 MLAVIAAAVACGIIGIGVGYVYRRKIAEGKIGQAEVEAERILTTARQNAEARKKELVLEG KEEIHKLRNDAERENKERRNELQRLERRLLQKEEHLDKKMDSLEKKEEGLLHKEEDMDKM QARIEALHGEKLAELERISGMTYEDAKELLLHNVESEVKYETAQLIKNLEEEAKSEAETK AREIISLAIQHCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRAIETLTGVDLIIDDT PEAVILSCFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVNQKIREAGEQATFE TGVHGLHPELIKILGRLRYRTSYGQNVLRHSIEVSMLAGIMAAELGADEMLARRAGLLHD IGKALDHEMEGTHVSLGTEVAKKYGESKLVVNAIEAHHGDVDPLSVEAVLVAAADAVSAA RPGARRETLENYLKRLTKLEEIAKSFAGVESCFAIQAGREIRVMVQPDKLDEADCILLVH DISKRIEAELEYPGQIKVVVIRETRMVDYAK >gi|290781207|gb|ADGP01000020.1| GENE 166 160214 - 160633 391 139 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1198 NR:ns ## KEGG: Vpar_1198 # Name: not_defined # Def: regulatory protein RecX # Organism: V.parvula # Pathway: not_defined # 5 133 2 134 142 71 35.0 9e-12 MTAYEEAYEQALKFLAVRFLSEGELRYKLQLRQVREELIDAVVETLQREDLLNDARLARA VYQYYARKGQYGHAYIVNKLKKRKLSVPSDICPVDEMAVAEQLLSRRFSGPSPDCRKLSR YLQNRGFSISIIREILHRI >gi|290781207|gb|ADGP01000020.1| GENE 167 160630 - 161676 1514 348 aa, chain - ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 1 340 1 339 349 440 67.0 1e-123 MDAKQTALENAMKKIEKDFGKGAIMRLGDLAGKMNLEVISSGSLAVDLAVGVGGYPRGRV IEIYGPESSGKTTLALHAIASAQKSGGIAAFIDAEHALDPVYARHLGVDTGELLISQPDN GEQALEITEELVRSGAVDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGI IAKSKAIVIFINQLREKVGVMFGNPETTTGGRALKFYASIRMEIRKGEVIKSAGDVTGNR ARVKVVKNKVAPPFRNCEFDIMYGTGISREGTILDLGASMDIIEKSGTWYSYKGERLGQG KENVKLFLKEHPETADEVERIIRDTLAAEPEKFEEVMEEETAGEATEE >gi|290781207|gb|ADGP01000020.1| GENE 168 161689 - 162942 300 417 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 258 405 746 895 904 120 40 6e-26 MRVEIITVGSELLLGEILNTNSQYLSEELNRLGYSVLYQTTVGDNKTRLAQALQLALQRA DLVITSGGLGPTQGDLTKFVGAQVMRTPLYFDEGVYKAIEQWLQRRYTSPVITENQKRQA MIPQGATVFSNEAGTAPGTALQKKGKTLVHLPGPPRELQWMFRQRLKPYLLRQFGSQGYI ASQYIKVYDLGESLIEERLSDLERQQQNPTLAIYARPGFVEVRITAKAASEEAANTMLQP LQKEVERRLARRIVTYNKETVAHVLGRLLKAGHWHISAAESCTGGLIGSLLTDIPGASDY FLGTIGTYTDEMKQQLVHVPASLLASCTAISAPVAAAMAVGSRQLYGADIALSTTGLAGP GGGTETRPIGLVYTGVSGPWGTVTHKNIYMGDRREIKLRAAVRAIYYGVQYILKHSA >gi|290781207|gb|ADGP01000020.1| GENE 169 162959 - 164290 817 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase [Brachyspira murdochii DSM 12563] # 1 442 1 438 440 319 38 7e-86 MEKIGFVSLGCSKNLIDTEVMLGILREKHMTITEDLAQADIIIVNTCTFIEKAKRESIHT ILQAAQYKEQGSCKMLLVTGCLSQQYKEELLQEMPEIDALLGTGSWDRVWEAITTVRQGK RVCFMDNVSHLYDQHTRRLRTTPSYSAYVKIGEGCNNGCTFCIIPKVRGTLYSRSMDSIV EEVTQLAHEGVKEINLIAQDTTSYGVDLAGRSLLPALLRRLVKVEGIAWIRLFYLYPHFF SDELMNLIIQEDKICPYVDLPLQHISQSVLQRMNRKDSEADVRRLVEKLCRGERKLTLRS TFIVGFPGETEEEFNTLAEFLKTSAFDDVGVFTYSQEEGTPAASMKAQVPEAVKEERYHT LMAIQAQVSEVRNRALEGTEHVMLVEKIETENGVRQAVGRIEAQAPEVDGVTYLENATTV MPGDMVRVRIVQGFAYDLVAELA >gi|290781207|gb|ADGP01000020.1| GENE 170 164291 - 165289 856 332 aa, chain - ## HITS:1 COG:ECs0415 KEGG:ns NR:ns ## COG: ECs0415 COG1840 # Protein_GI_number: 15829669 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 90 330 93 343 343 70 22.0 4e-12 MLGWGYYALAQKERAAKQATYAAAEHLLVYSDLPDSVNRGMAGAFYQRTGLSVQIQTMSD RKLQETVTDMGGQEKPDLIIAAEQVLRNVGSKGLLRTCSVTGAERVLPSFKDRKNRWLGL WYNPMVFAVSADYYKQYGHTLQGWQDIVKQTNCRILFPDLAATDMAGDFLCTLVEMQGRD NTAAYLRRIQQQRISYAKTWAINVRRVAGGEVDLAVVDESNAAQYQAEGAPLVIVYPREG TSYWLTGIGLTVWNHESEIAASFVEWLLSPEVTRVLQQQQVFVEYTTTPHPYRSDAAGKR LVLFPVKKEYTDEGRSVLQDWWLRTVRFGRDR >gi|290781207|gb|ADGP01000020.1| GENE 171 165394 - 165771 189 125 aa, chain - ## HITS:1 COG:SA1125 KEGG:ns NR:ns ## COG: SA1125 COG1426 # Protein_GI_number: 15926865 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 125 1 126 130 61 27.0 4e-10 MRTPGSALQAAREKQGRTLQEAAKALHIKKEYLAALEADAYETIPGAVFVKGFMRNYAQY LGVSAEKLVKEYSGKRESSKKTAPSSVANSRQEVLKKRNTRGKWPEITIIAGIVIFLWLI AWLLL >gi|290781207|gb|ADGP01000020.1| GENE 172 165850 - 168312 2390 820 aa, chain - ## HITS:1 COG:BH2395 KEGG:ns NR:ns ## COG: BH2395 COG1674 # Protein_GI_number: 15614958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus halodurans # 35 810 16 783 789 520 42.0 1e-147 MAKEVKRKVGRPPGRRGKARAATGKISGQTGTGLLKFEIIGLLLIFFGIFSALGSAGIDT GSMGYAIDGVLAYGFGFSRIVISLALIIVGLKYIMLRRGWPLNKNWGIRFWLYIIFLSLV HLALIPAGAECMPDSMRVGGGVFGAVVASALRALVGNVCAFIVLIIAGVATLILWKRWSI SRPVTAVSEKAGVKMDRLSDKAVDSIQGATRSFQEWQETRNHFFDMQKDKGILPPGRRKE DAQEEALPLSSDPAAAAVPEVEEQEYPEERVTESPEPAGESEEKMPVCASAAAKEAASID VESPAVDVPTATIEAMADLKPVEVEPTTTAADIGTEGCGAVPKAPGQQSYRLPSLSMLKK GTQQSGGVSDEVRHNAAILQDTLRSFNIDAKMLNASQGPAVTRFELEPAAGVKVSKIVHL ADDIALKLAATDIRIEAPIPGKAAVGIEVPNTCVAPVTLRDVLESDSFRLAKGGVPVGLG KDIAGNPIVADLTKMPHLLVAGSTGSGKSVCINTFIASILFKQRPEDVKLILVDPKVVEL SNYNGIPHLMTPVVTDPKKAASVLRWAVREMDDRYKRFAVTRTRDISRFNELHPEEAMPF VVIIIDELADLMMAASGDVEESICRLAQKARACGMHLVLATQRPSVDVLTGLIKANIPSR IAFAVSSQIDSRTILDMAGAEKLIGKGDMLFYPMGASKPLRVQGAFIGDGEIDALTEWIK EQGKPQYDQAVQQAQEEDSSEEGAFFEDELMGQAVDMVLETGQASASMLQRRFRIGYTRA ARLIDTMEAMKIVGPNHGSKPREILMTAEEVQKKFFSAPV >gi|290781207|gb|ADGP01000020.1| GENE 173 168330 - 169649 1334 439 aa, chain - ## HITS:1 COG:BH1257 KEGG:ns NR:ns ## COG: BH1257 COG2256 # Protein_GI_number: 15613820 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Bacillus halodurans # 19 439 4 423 428 377 46.0 1e-104 MNGDDLFSLAAADLHRTIRPLAVRMRPDTLEEIFGQEQLTGPGAFLRVMIEKDMVPSLLF YGPSGVGKTTLAHVIAAETKCKFVNLNAVMSGTADLRRVIETAKQDIQIYQKRTLVFIDE IHRFNKSQQDILLPHVENGTIILIGATTENPYFEVNRPLLSRLRVIVLPPLSVQAVVAVL RRALRDEEKGLGQQRITAADETLQSLARLADCDARMALNLLEQVCALLPAGGRITSSYLA KVVGQRAYTYDKGGDAHYDTVSAFIKSMRGSDPDGALHYLARMIEAGESPAFIARRIVIC AAEDVGLADPQALILANAAAQAVQSVGWPEGRIILSEAVVYIACAPKSNSAYQAIDAALA DVRKGNCGAVPAHLKDAHYSGAAALGHGTAYLYPHNYSQGWVKQTYLPESLQGRVYYKET AYGEEGKKATLWHKRRQET >gi|290781207|gb|ADGP01000020.1| GENE 174 170054 - 172054 2301 666 aa, chain - ## HITS:1 COG:CAC1348 KEGG:ns NR:ns ## COG: CAC1348 COG0021 # Protein_GI_number: 15894627 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Clostridium acetobutylicum # 4 663 3 660 663 782 56.0 0 MNTMDTTCVNAIRVLAADAIEKANSGHPGLPLGAAPIAYELWARHMKHNPKNAHWENRDR FILSGGHGSMLLYSLLHLYGYGLTLEDLQSFRQEGSVTPGHPEYGHTVGVEATTGPLGAG MAMAVGMAMAEAHLAAVFNTEDYPIVDHYTFVLGGDGCLMEGISSEAFSLAGTLGLGKLI VLYDSNHISIEGDTELAFTENVQQRMAAFGFQTLTVEDGNDLQAVGAAIETAKADLAHPS FITVKTEIGYGCPAKQGKAAAHGSPLGADNVLALKKNLSWPEPDKSFVVPPAVYEHYHTL GQQGEQKEAQWQTLFAAYSQAYPEKRQLWDRMHHPVAAETLWKDEEFWAYADKPQATRSL SGVMINRLKDRVPQLLGGSADLAPSNKTYMEGAGDFSARNYAGRNLHFGVRELAMGGIVN GLALHGGVRPYAGTFFVFSDYMKPMIRLAALMKLPTTYVLTHDSIGVGEDGPTHEPIEQL AMLRAMPNVCVFRPADATETAAAWYLAVTGTQTPMALVLTRQNVPQLQGSSKEAVKGAYI LEEAANAQPEAVLIASGSEVAPAVEAKRLLAAKNIQVRVVSMPSMELFEQQDEAYREKVL PTHIRARIAVEAGSDFGWGKYVGLDGATVTISHFGASAPAETLFTKFGFTAEHIAATVQA VIQKNQ >gi|290781207|gb|ADGP01000020.1| GENE 175 172173 - 173075 937 300 aa, chain - ## HITS:1 COG:RP718 KEGG:ns NR:ns ## COG: RP718 COG1560 # Protein_GI_number: 15604555 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Rickettsia prowazekii # 96 288 104 289 290 79 30.0 1e-14 MYRFMKLFSWIVCRLSRKKRQVLGTFLGELFWLLVPKKRKRLAKEQILSCRITTDPEQAT AIAKAGTTRFGPMIISVLTYPLYKKRGFGLQITWRGKEHLDALRKSGKGAVIMASHAGNW EMLGAALAMEGYPLISVAQKQNNKGADRFINEYRTMMHQQVTYKTGIRDMIRLLHSGHYI GLLMDQDPGMTGIAVKFFGKTTLTADGPAKLAGLGNYPIYSLFIREPAPYCYVIEVTPPI FPYDRDKTLTAAEKRARVREITQCLNDRLEAYIRQYPEDWFWLHNRWKWTRRYEEIQNKK >gi|290781207|gb|ADGP01000020.1| GENE 176 173087 - 174106 1236 339 aa, chain - ## HITS:1 COG:PA3646 KEGG:ns NR:ns ## COG: PA3646 COG1044 # Protein_GI_number: 15598842 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Pseudomonas aeruginosa # 5 337 8 343 353 236 42.0 6e-62 MVRKTIQELATFLGGHVIGDGNRYITDVKSLAEAKKTDITFAVAPYTEYVPQVDAGAVMV TAEIPAGKNTLLVVENPRLAFSRLLTLFHPRQTVEPGIHPTAVIDKSADIGAYTAIMPYA VIGKNVKIGAHCTIYPYVFIGDQAQIGEGTTVYPGAVIHENCVIGNHNVIRAHAVIGGEG FGFATEQGKHIRIPQIGNVTIGDDVEVGACTCIDNGTMGATAVGRGTKIDNLVHLGHNVE IGDDCFLIAQTGIAGSTKAGNHVTFAGQTGCTGHITIGDNTVFAGKTGITGNIKGGGVYA GFPARPHMEWSRTQAHLKHLPELVKRVKELEERLAALDK >gi|290781207|gb|ADGP01000020.1| GENE 177 174119 - 174538 616 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968727|ref|ZP_06560265.1| ## NR: gi|290968727|ref|ZP_06560265.1| outer membrane protein [Megasphaera genomosp. type_1 str. 28L] outer membrane protein [Megasphaera genomosp. type_1 str. 28L] # 1 139 1 139 139 155 100.0 1e-36 MKNVKKRIGAGISILMIAAMMAGCGNGDKIGTVDMNQVMEKAPAAQKIKKQIEAKQAAQE KDLQQAKATLSPAAYQQQEQKIQQNMQAYSMSMQQQFQSQMEGKLAEIAKEKKVGIIVYK EAVPQGGIDVTADVIAKLK >gi|290781207|gb|ADGP01000020.1| GENE 178 174554 - 175438 1020 294 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968728|ref|ZP_06560266.1| ## NR: gi|290968728|ref|ZP_06560266.1| outer membrane protein [Megasphaera genomosp. type_1 str. 28L] outer membrane protein [Megasphaera genomosp. type_1 str. 28L] # 1 294 4 297 297 317 100.0 6e-85 MGAALFFRWQAVQVQQPAPVASPIYARADVDRILMSHPAYATYHQQELEYRRLSSQYEAA CRESALQMAAEAQLTRQDELAAQARQIMMEADIREKQEQKEQEVQEKVLKRYAALAAGES EQASSAAKEETLQLVNLQLQEQNSGLSREERQQLRRQWQQHVQQMRYGTTGKLSPQDAKA LADYQQRLQSECDVYRRQLQQQERLRQEQRLAAQIRQREARRAQQMTAVQQRKWQQRLAQ KQKKLVDLREKMIADIRTQAAAVAHEQGLALIVDTPYPEGEARDVTDDIIIKMK >gi|290781207|gb|ADGP01000020.1| GENE 179 175484 - 175969 788 161 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0528 NR:ns ## KEGG: Vpar_0528 # Name: not_defined # Def: outer membrane chaperone Skp (OmpH) # Organism: V.parvula # Pathway: not_defined # 1 161 1 162 162 95 43.0 4e-19 MMSELGNKKNVKVFSAVIALVFVLSIAGLALMQMGNPVEAAPSSNVGVVDMSKAVPPDNK DIQAAQQQMQQLSAAMQKQFEQQSANMTDAQKQELFQKMQGELAQKNQELVKNVQGKVES AIGDVAKTKGLSVVLDKRAVLYGGTDITDQVAKKLSSQSAQ >gi|290781207|gb|ADGP01000020.1| GENE 180 175985 - 177259 1305 424 aa, chain - ## HITS:1 COG:no KEGG:Selsp_1802 NR:ns ## KEGG: Selsp_1802 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 19 422 28 431 433 162 25.0 3e-38 MGKAWIIAIAAAILPCNIVAARTVSHVTVTVRTVGVGLPALAEKRMQAGIQTVGNHVLLA RDTQDLQQRQEEYNRTLNDIVNRVLIGYTVERIQLIPGTDTQLQVYLRPWGNTVRAVRVV YDYGAVSASGKSYMQADLQPVQAVAENALIGLPIDSLDWAGNAVQEILTAESARALPEFY PHITVQPGRTCVVKAVFVPKQPVIRKVEIRLHSENLPRTLFWGVRRHLAAQYLSLIGLPA AFVRRHMPELQEQIRQEVQAQDIVRNYRLQVLSSLQVGDETAIISLQPYTEKYDVQGRVY VDMGRSDTQGDTVVEGTLGRKWGGSSELFISGRFTPATLRWNGLLGYYYRWGPDTKLGIQ YETFPRAYYIWFTQKWNDHWQVRLERNLKQKENELGIQYRPHEYMGIEYIIAEKAQWVRL IGYM >gi|290781207|gb|ADGP01000020.1| GENE 181 177266 - 179323 1990 685 aa, chain - ## HITS:1 COG:FN1911 KEGG:ns NR:ns ## COG: FN1911 COG4775 # Protein_GI_number: 19705216 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Fusobacterium nucleatum # 141 685 102 678 678 193 29.0 8e-49 MNTRKKKMLIALMTGSLMTGTVFAASASTPAEGQSIATSGVAHRTQSDMTNLSTKKNASI VKQQAEQAQNDAVRNLPEPLPLLSTLPGTPVGYFSGINDVHIDQTVPKYAVAVLPQGQEM SLPYGDAVSDSEIAPYIGKTITSIKFSALPDDKLADVLKKRLALRIGDTVNGEYLRHDVN SIGSSGLFAVVKPAFQVVPEGVSLVYHVRVNPTVRGIELTGNESIPASTLGKLLNVQPGT VLNTTLISKDVSNINTLYNNWGYMLNHVSEVKMDDRGILHIRIAEAHVEDIFIRGNTKTK DRVILREMRFGKGDIFNKALVSRSIQRIYNTGYFEDVNVRLLQGQRNRQNVILEIDVAEQ KTGSVTIGAGYSESDGLVGIIGLSETNLRGTGDKVALNWEFGGKSSSNKNHSLSYTHPWL NKYGDSLGFNFYDRKGQYTDYGDKGAVASYEKKTRGFSVTYGRSRSEYTGDYFTLEAKNN EYSRYLSGLNYTQDETYFKNNFGRVHTLTWSHVFDNRDNVFDPSQGKRLAFTGIMAGHGL GGNFNYTKLIGEARLYRALGHGHVAALRVMGGTAFGSLPYNDLFTLGGADTIRGYEDDEF RGNKMYAVTLEYRYPIAKKIQGVVFTDVGNAWGGTENISWYHSSHKVHESAGVGFRVTTP IGPVRLDYAWGQNGGKFHFSFGGKF >gi|290781207|gb|ADGP01000020.1| GENE 182 179336 - 179893 464 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968732|ref|ZP_06560270.1| ## NR: gi|290968732|ref|ZP_06560270.1| hypothetical protein HMPREF0889_0380 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0380 [Megasphaera genomosp. type_1 str. 28L] # 1 185 1 185 185 308 100.0 1e-82 MGRSDKRLLLQLRSARKWLEKAETEFAKKADIRGELNLMLAEAEMKNMRKHHTSAAYFKS YGMYIVAAIVFIGAGVGIRALSVAPVPTVTSDIAVQSLHKGAPSPAAGETAERKESASLR GQRNSVRATPAPLRTVPSAASKTACVPEKIVTRTDDNAAVLSTRQMQETVQAACRSLQST EIQNE >gi|290781207|gb|ADGP01000020.1| GENE 183 180009 - 180662 907 217 aa, chain - ## HITS:1 COG:RSc0374 KEGG:ns NR:ns ## COG: RSc0374 COG0568 # Protein_GI_number: 17545093 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Ralstonia solanacearum # 2 103 33 134 306 68 38.0 1e-11 MLTSYLEELKKITLLTREEEQTLWRAYKEQGNMQARARLIEQYQPLVFKEVMRLSMHSEW IPDAIQEGTVGLIEAVEHFRIQQGVAFSLYAVHRIRGEILEYLRREGGSSCQSLNEVDDM GVSLQDLLCDPEKDTGRQTEKHLLAEEVLRLFPRLPKKERTVLAGVYLQDRQQKNIAAEL SVSVAYVYRLRQRGIHRLRGMFGQLVRKKRKNRGDIK >gi|290781207|gb|ADGP01000020.1| GENE 184 180678 - 184973 3543 1431 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0526 NR:ns ## KEGG: Vpar_0526 # Name: not_defined # Def: protein of unknown function DUF490 # Organism: V.parvula # Pathway: not_defined # 27 1431 26 1429 1429 450 24.0 1e-124 MKKTQIVMGTIGVCVAVGLVAIQAEKPVLLQKVATVIRYSVNKKINGSLQFSSLQIDWQG AVVLQHPVITDRQGRIVVSGNKVTLQLNPWRLLSVWKGANAAVAIDRVDIDAPTLHVWRN VNDKQWNIQSILQFEQSHTDNGFRAVIGVRNGTIRASLPGRTGIRIKDCNGTADFSSPQK VRVNLDGKLEGRQISLQGVYGSSQFWQGTLRSDGIPLVWCQAIIPPQAVPVTFQGGMIQR LRIGVSQHGTQRRLQGQLEIQAGKAVVKGVHLTAVDGTLVLDSSVIHVRQMQGKVNGQAV QVAGNVDISGAVPQCNMAVDAERIQLRAFPAYVPQALTGEAGFSGRIQGKINDLQVQGRV TVPRASYQGVSLRQGRAEVEFKRHRLAVKRIYGQAANGTVTGDGTYDGKTHIFSAKLKVA QMQLAKIPYCPRSLQGVITGNIWLHGPLTISGIQAAVQGTVRNLTYKGVQIPYLQGNVQY TGGMLRVSSMQAHAGGGAVQLQGTYDYNRRIPDFSFRIQGVQPQFLSTRLPIAIRGIWNG KGAVYGPLWQWRLQFQAVKGAVQQRRFDTLTGELQGDRHMINIQQAQWRYHDGIHTAQGR VNVAAKTLNLSIHSNRVRLEDIAGNMVPRHMRVTGWAANDVLIRGQWTRPEAIGRIHLWD GSVQGYLYQQVQGDYHYQDHTLYLNNVTASAYDANFTAQGSVGKKMDLAVHGQSIEVPRF IRNSPLQPQGFVDVQLHVGGTPTAPDLQGKVRSRRFIVQGFPMEAVSGDFSYVNHIWRLN NLSFRQGQGKYSAVGTVNVRTGKLSAYTKIAQGNLQNILQVAHIPVQNVKGSVDGEIRVQ GTRKDPHVDVVGTLTQAALNGLNIEPSPVHIMYNGKTVTIRSLVLKSGDAVLAVKGRYSF YGPVHMQVAVRKFPSTVLTGILGHTRLPLISPVDLVADIKGTAQQLQADVSAQLNGGTIN GIPFDKAYALGNFKQGKFMLNQATITKGNYRVSANGVVPLRALTDEKSRDPLAVTLKLDK ANLDALTFLTPRIQAATGEVKGNLTLGGTAARPLVHGEVTCEDGTVKFRDVKYPLQHIVG LASFQGNHMVMDVKAAMDKEDALHPGTIAIQGEADWQGRRLTQYKVTADADHPVIYSPYF KGPLNGHLLLRNRQHKPILSGIVQIAHAVIKPPLAMSSSASLPNIGLDLTVSSGQSVRLY NPAICDLMITGSATFRGSTRQPKPFGKFEARSGLVRYLDTNFKIAKAQADFSQRNSLLPT VDIEGNSRIGQYDVGLTLRGPVERMDLILRSNPPLTKQQIVSLITLRNGNAKQQSSLDDK DFHQLLGSGLRMTLNSLGITQQLERVLALDRLMVTNGSLNLNDRNTDLSKNYYNIEMGKY IYDNVMLTAAFGLNHQDNRVGIQYDLTRGLSIDTWKSKDSSFLGATYRYSF >gi|290781207|gb|ADGP01000020.1| GENE 185 185102 - 186577 1790 491 aa, chain - ## HITS:1 COG:alr2887_2 KEGG:ns NR:ns ## COG: alr2887_2 COG1538 # Protein_GI_number: 17230379 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Nostoc sp. PCC 7120 # 88 480 27 434 443 115 27.0 2e-25 MKKNIVQKIGMIMAFSAVTMTVAAATPGTADGVPENGNIRPVDVTPLMREELAEQIAAHT AVIREREAKKAAASVITDKGTHTTQMTLDLPKTVRLALAYNRDLKASRYAVKKAEAAIGE AKAARSITGEYTFSAGRGSAVTAMGTMTGNQYNHELTVSLPLYTGGRIEHGIALAELGKE AAQEDLLKSEQNTKLEAVKGYFSLLAAREVQRVYKEAVANLQAHVQNVKAQYTVGTVAKV DVLHSEVSLAAAKTRAVGADNEAALAEDNLDNILGLPLTTALTLQDHRLPFQAYTLSLQE STQYALTYRPEVLQAALAVQKAATYMALAKADNRPTAGIRFTQAWNDTAFPGTKHKTWSL GGQISYRFYDGGAGKHKISQARQELNIAGEIEQKTRDGVQLQVKQAYLAVRSAAQRVRET QAAVTQAAEGFAISRVRYEAGVGINLDVLDAQLALNQAKINHIQALYDYNVGISSLEQAM GMDVRSGVVRP >gi|290781207|gb|ADGP01000020.1| GENE 186 186611 - 187846 1515 411 aa, chain - ## HITS:1 COG:sll1002 KEGG:ns NR:ns ## COG: sll1002 COG1463 # Protein_GI_number: 16329641 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Synechocystis # 6 280 9 332 456 85 24.0 1e-16 MKWNAEAKVGLVTIVGVLVFSYVIIDLAQAEIFGKPGYEVQALVADANGLQKGNVVRYAG VNVGRVEKVVPTAEGVRVTLKLNNEVKIPKDSQISITTDGLMGEKIVSIKAGRDTTHYLQ SGDRVAGMPAKTMADMMDSAGSLMNNANTMVENINAIVGDARTQQAVRGSLQHINGITAQ TDALLQQNSGNIRQITQNMAALTGQMNVSLQRLDGDGATSENVRSVVRNMQITSAKLAVV ADSLASVSGDAQTQSDIKTTLKNTAAISQKVNQLLSGNNDVQTTGEAGILYNTSKKETYG YANFIVKRNKKFILLGSEGIGNRTRMNLQYGTDGNLMDARWGLINGELGIGLDFFADGPL RLSIEGYNPNQWQYRFKGQYRVAPNVYLFGQITRPFRQQDGGNYYGLNYSF >gi|290781207|gb|ADGP01000020.1| GENE 187 187830 - 188594 340 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 240 245 135 34 1e-30 MISLCDLSFAYKSQCILDHVNLEIHQGETLAILGASGSGKSTLLRLLIGLQKPTSGKILW DGQDISRFSETQWDRARMRMGMVFQYSALFDSLSVGENVAFGLRQRTSLADTEIRRIVAE KLALVGLAGKEEARPNELSGGMKKRVGLARALALNPEIILYDEPTAGLDPLRSADINRLI RDMQQQLQVTSVIVTHDMTSAFYVADRLAFLQQGKFRLIADKETFKKTKDRDIQLFIHGG ILPHMEMRNNEMEC >gi|290781207|gb|ADGP01000020.1| GENE 188 188603 - 189364 1087 253 aa, chain - ## HITS:1 COG:RC0129 KEGG:ns NR:ns ## COG: RC0129 COG0767 # Protein_GI_number: 15892052 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Rickettsia conorii # 7 253 9 257 259 169 40.0 4e-42 MTVLECIGNRVLSLFSQVGAFTLLWGRTIRQLPNIKWHLTIYQMAKLGVDSLPIVSLTLL FAGMVMTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILTGVVMAGRVGAAMTAEIGTMK VTEQIDALRCLAVNPIAYLVVPRFVACVLMVPLLAFYGYVIGTAGGYAVAVWGAGLAHFT YVNSIAVLTAVGDIVYGLIKAMFFGGIIAVIACYEGFHAESGAEGVGRATTKSVVTSIVF IFICNYILSVILY >gi|290781207|gb|ADGP01000020.1| GENE 189 189529 - 191484 2256 651 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0521 NR:ns ## KEGG: Vpar_0521 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 638 6 651 660 600 48.0 1e-170 MINWRKIRKIAGYSRLLVLCCVMTMSVQAQEFMAVKDVQEGMTGYAKTVVHGTAIETFPV KIIGVMKNSGPSGDLVLAEFSGPLIERSGGIAQGMSGSPVYINGKLLGAVAYGWSFTKSR LGMITPITDMVKLWNVPNENEMRPFNAREASLIPITTPLMTSGLDSASLQWFVGKLPQYR FHPVAAPTSSGDGASVALEPGSAVAAALMNGDMKMGAIGTVTYVDGDHIVAFGHPFLKKG SINYFMHNAYIFTIVNSLNTSFKLGSIGRETGVIEQDRGAGIAGRRNDLRPGIPVIIKAT DEDTGTTLEKRVKIVEDNELTPVLASTAVYNTINKTLDRFGGGTVSLTYTIRGAGGTDRD ITRHNMYYSSENINEKSIDELYNVLDMLKHNEFIAYPVLDIQMNVRVSQAKKTARIVDAS AAPAVVAPGDEIYLKVKLHPYRGADETRILSFMVPKDQPPGEMILEIRGGGVTPLPYLIE RQKYNLTDEILARLRHYKDFAELKKKIETEESNNDLVVEILDKNVSMVPDKKDTSDKVKI REKVENPTDSDLRKPHKKGAKEEKDTEAKSLVPTPYIILGDGQLTFQVVRPQEREKYRKK YRSAAGASAVMKAAIETAEGATKKDRKDSKTKNAEEAAAVSADTDTVIGSL >gi|290781207|gb|ADGP01000020.1| GENE 190 191497 - 191790 407 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968740|ref|ZP_06560278.1| ## NR: gi|290968740|ref|ZP_06560278.1| hypothetical protein HMPREF0889_0388 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0388 [Megasphaera genomosp. type_1 str. 28L] # 1 97 1 97 97 120 100.0 3e-26 MRIVKNVMTVMLGASFLAVTPVMAEEVSCASVLTGTVVSVAAVGTQVKEGDVLLTVASLA GPMPAIRAQRDGVVKVVKTAPGAEVQQGAAVIIVDEK >gi|290781207|gb|ADGP01000020.1| GENE 191 191802 - 192734 1294 310 aa, chain - ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 1 308 28 335 340 283 47.0 4e-76 MVNEPSVIAVDTERNTVVAVGKEAYAMQGRTPGNIAAYHPLQAGVIADYDATAYMLHYFI GKAIRKVRLFKPRVLVCVPSGITNVERRAVMEALVQAGAGKIVIMEETLAAAVGAGIDTA RSNGSMVVDLGGGTTDVAVLSLSGIVISASLRLGSRTFDQAVQQYLERYKHITVGCGTAE KLKILIGTALADGKQDTAVVHGRSTETGLPAEADIDSQEIRQALQEPLDCILKTILDMLE KTPPELAADIADHGILLTGGGMLLDGLDRLIVQKTGIAAYLCEAPLLCVAQGAGKALRHM NDFKNNMEDI >gi|290781207|gb|ADGP01000020.1| GENE 192 192856 - 194127 1654 423 aa, chain - ## HITS:1 COG:BH3749 KEGG:ns NR:ns ## COG: BH3749 COG0766 # Protein_GI_number: 15616311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Bacillus halodurans # 1 417 1 417 440 492 63.0 1e-139 MEKLVIRGGKPLRGTVRVSGAKNAVLPIIVASMLGMTQSTLTEIPELADVQTVCDVIRSL GVEIKKLQKGVLEIDAAGLNATAAPYDLVRRMRASFLVMGPLLARKRKAEISLPGGCSIG ARPIDLHLKAFEAMGASITLADGNIKAEVPQGLKGAQIYLDFPSVGATENVLMAAAMAEG KTILENAAEEPEIVDLATYLNSMGANIRGAGTNVIRIEGVKTLHGAAHAVIPDRIEAGTF MVGAAMTGGDVFVENALSEHLKPLIAKLKEVGATVEEEIDGIRVMGGSQRRSVDIKTLPY PGFPTDMQAQFMALTTICKGTSVVTETVFENRFMHVDEFKRMGAKIRIEGRSAVIEGVPV LRGASVSATDLRAGAALVLAGLVAEGETKVGYLYHIDRGYDNLVAKLQRLGADIVRVNME EEN >gi|290781207|gb|ADGP01000020.1| GENE 193 194218 - 194376 58 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968743|ref|ZP_06560281.1| ## NR: gi|290968743|ref|ZP_06560281.1| hypothetical protein HMPREF0889_0391 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0391 [Megasphaera genomosp. type_1 str. 28L] # 1 52 1 52 52 73 100.0 6e-12 MKYKGRPLYSFGLGRGKFFSKSVIDVFSLGSGNRTARFAVSFSFGFGIFMVQ >gi|290781207|gb|ADGP01000020.1| GENE 194 194373 - 194954 691 193 aa, chain - ## HITS:1 COG:no KEGG:PP_4450 NR:ns ## KEGG: PP_4450 # Name: not_defined # Def: phosphoglycerate mutase family protein # Organism: P.putida # Pathway: not_defined # 1 157 1 156 208 110 40.0 3e-23 MKTIWFVRHGESVADRGEATENPQFIFLSSAGITQAGTFAERFPWQPELILTSPYLPAEQ TALKMIARFPEAATGIWECVREFVCLSPGRFVSTTSAERQPALAAYWQREDPDFVDGPGA ESYRQLAARTEHMWELLSRRRERHILIFSHSRFISNVLLQYYHPGLAAETYMRLFPREKV IPPCTVQEVQVFQ >gi|290781207|gb|ADGP01000020.1| GENE 195 195027 - 198560 3466 1177 aa, chain - ## HITS:1 COG:CAC2499_1 KEGG:ns NR:ns ## COG: CAC2499_1 COG0674 # Protein_GI_number: 15895764 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 7 409 6 408 413 510 59.0 1e-144 MVGQLTKTMDGNEAAAHVAYAFTEVATIYPITPSSPMAEHVDVWAAKGRKNIFGQPVKLV EMQSEAGAIGAVHGAAETGSLCSTFTASQGLMLMIPVMHRLSGQLKPVVMHVAARTVGSH TMSIFGDHSDVMGCRNTGFAMLCSANVQECADLAAVTHLSAIKGHVPFMHFFDGFRTSHE IQKIQLLDEDTLAALVDREALYAFKHRGLNPEHPVMRSTVTNPDMFFQAREANNLWYERL PGIVQEYMDAIGALTGRTYKIFEYYGAADAEDIVVAMGSVAGTIQETVDALNREGKKTGL LQVRLFRPFSLEHFLQVLPPTVKRITVMDRTKEPGALGEPLYCDICAALEHRGLPLSVYA CRYGLSSKDVPPASIHAVFQNMWNPAPKKHFTIGILDDVTKLSVPDTPISVDMRGTINCK FWGFGSDGTVGANKNSIKIIGDNTDMFVQAYFEYDTKKSGGVTKSHLRFGQQPIRATYYI KQADFLACHKEAYMDTYDIMDEVRVGGTFLLNCSWRAEELETRLSAAVKRKLAEKKVKFY IIDAAAIAEEIGLGRNHTNMVLQAAFFALTRILPLEDAVKYMKKAIAETYLVKGEKVIAM NQEAVDRGINGLVAVSVPEHWATAEDTRPVEERRVPDFIKKIVDPANAQKGDSIPVSEFV PYVDGSYPLGTTQYEKRGIASTVPEWIPDRCIQCNRCALVCPHACIRPYLVDEQEKAAAP ASFVTKKAIGKDMGAYEFRIQVSPLDCYSCDTCANVCPAKDKALVMRPLETQRQEDVNWQ FAQTVQPKVTGMDKFSVKGSQFNKPLLEFSGACAGCTETAYMKILTQLFGSRMLVANATG CTQAWGSAMPSIPYTTNHEGYGPAWSNSVFEDNAEFALGMALSMEQQREDIRLKTEQLAA LTVGPLQEAAVAWLASIGVDNEGEVTEDISRRYIHELQQVTLTGEAAVLQQYILAHREHI IKKTIWMYGGDGWAYDIGYGGLDHVMAMDVNINIMIVDTEVYSNTGGQSSKATPIGAVAQ FASSGRKFNKKDLGRLLMTYGHVYIAQVALGADPGQLIKAIKEAEAYNGPSVIIAYAPCI NHGLSCGMGHAQEEMKRAVACGYWHLYRYNPVLKQEGKNPFILDSKEPQESFRDYLMGET RYAALTRTFPELAEELFVKAEEFAKQKYEVYRMLAGK >gi|290781207|gb|ADGP01000020.1| GENE 196 198772 - 199938 1308 388 aa, chain - ## HITS:1 COG:CAC0877 KEGG:ns NR:ns ## COG: CAC0877 COG2230 # Protein_GI_number: 15894164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Clostridium acetobutylicum # 15 388 16 388 391 353 48.0 3e-97 MNILDSFFIHYLHRFDKYCFTVELHGKKYTIGAGEPAFEIAIHKDIPKRELLSSTSLALG EAYMRKDLEIKGDLFTALQCMLSQNNQFSLDKSALGRILYTSESKSKQKEQVSSHYDLGN DFYSLWLDPSMSYSCAYFKNDTDTLEEAQHNKVHYILEKLHLQPQMTLLDIGCGWGYLLI EAAKKYGVKGFGCTLSKEQWKKGQERIKAMGLEGQVQIELIDYRDLEQSGRTFDRIVSVG MLEHVGRSNYPLYMETAEHLLVEGGLFLLHYISGHDETVGNPWMRKYIFPGGTLPSLREI ISLAYDNDFQVIDVESLRRHYYKTLMCWYRNFQGVRDRVIAEKGEEFARMWDLYLCGCAV SFFIGNIDVHQVLMTKGTNNELPMTRWY >gi|290781207|gb|ADGP01000020.1| GENE 197 199965 - 200792 1054 275 aa, chain - ## HITS:1 COG:BS_folD KEGG:ns NR:ns ## COG: BS_folD COG0190 # Protein_GI_number: 16079487 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus subtilis # 3 272 5 275 283 253 48.0 3e-67 MQLLDGKKVAAWYRRRLRTQVEARRKDGVYPELAIVLAGEDTASAMYASSMKKAAEAIGL QGTIHRFAATVTEETLLSCIERLNGKDEVFGILVMLPLPSHIHANRVINAICPEKDVDGL TDSSVARLYTGKPSFIPCTPKAVMAVLAYYHIALAGKEVVIVGRSNIVGKPLAQLCLQEN ATVTVCHSHTQALSQVVRRADVVIGAVGKAACITGDMIKPGAVVIDIGINCKNGKTVGDV AFDEAAKIAGAITPVPGGIGAVTTTMVLENVLTHK >gi|290781207|gb|ADGP01000020.1| GENE 198 200805 - 202808 2115 667 aa, chain - ## HITS:1 COG:BS_spoVD KEGG:ns NR:ns ## COG: BS_spoVD COG0768 # Protein_GI_number: 16078581 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Bacillus subtilis # 1 666 1 636 645 318 32.0 2e-86 MRIDNKDTQTEQIRKRSAGIWLLLGVVFVAVLVRMVDLQIVEGAKMTQYIDQQAETDRQL QSPRGTIFDRNGRVLAISEIAKSLYADPNMLRQDVKDPEKHVSVEKLSAALAPYVGMDAK EVQERLQRDTGFVWLARTMDHTKYEAVRQIIKQYKLSSLRFVDENRRYYPNGDMAAQLIG FVGENDKGLDGVEMVLDDVIRGSIQTVKTVMDPDKVPILDSALHSMLPHKERSVRLTIDS TIQFVAEKSLDGIMARNHPEGAAIIVMDPKTGEILAMASRPNFDPNDFGKGNAEAYKNRA VVNLYEPGSTFKPIMASAAVDSGAWGLQTEYLDTGAIQVRDRVIHNWDKSGMGRVTLREI LKFSINTGMVNIALHTGGKTLTAYAKRFGFGKETGIDLPGEGTGILFNAATMSDVDTAVM GIGQGIAVTPLQMVQAFGALANGGRMMKPFVIKEIDNPDGSVYKKTTPTLVSTPIKAGTA AAISRILSEEISSGGGQNAKIAGYTFCGKTGTAQRLNKAGTGYAPNQHIASFIGFGPLED PQYVVLIVVDNPVGVYYGAQVVAPVFKEMMTEIVRFKGVKPSHPTEAERPFIPAEPIKKR EIPAVIKTEKGIILPSFTGWDTREVNTWLNQAGLCFVPRGMGKAVYQNPEAGAPVRAGST VIVTFTR >gi|290781207|gb|ADGP01000020.1| GENE 199 202819 - 204159 1514 446 aa, chain - ## HITS:1 COG:BS_papS KEGG:ns NR:ns ## COG: BS_papS COG0617 # Protein_GI_number: 16079302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Bacillus subtilis # 1 222 1 220 397 157 39.0 5e-38 MERRVRKWLQALRQEGYEAYLVGGAVRDMLLHRKPHDYDIVTQARPEEIKQVAQRHGWSC TMQPGEVFGIVTVRVEGLSLETATYRKEVYGKDSHRPSDIWYATTLQEDMLRRDFTINAL AMTAEGRILDYVGGQRDLKEKRLATVGEPVRRFREDGLRLFRACRLVGQLGFTPEASLVQ AMPQALFRVAGISLQRAVQEGDRLLLTPYAAEGLQLWKQTGLAAAACRSRKNGVEVAVPI FPELVYWVSPDDWQRTLAYISHLPGDLTLRYAALFHPFCGTSLPPSAGNVFTADSWADIP TQVLRRWGKAAKEVRRILWLVQQSQTVLSLQSISEEACRRWWCREIRQGVFKRKEQLLQA VQQMCAMVRVMAAAQHLPFYERRVAVATRLPVETKDLLYSSALVQYCGKDTGACLQYLLR QVQEGRLHNTASVLEQAAEQWRQQYT >gi|290781207|gb|ADGP01000020.1| GENE 200 204353 - 204880 521 175 aa, chain + ## HITS:1 COG:TM1465 KEGG:ns NR:ns ## COG: TM1465 COG2109 # Protein_GI_number: 15644214 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Thermotoga maritima # 4 174 3 169 170 117 38.0 2e-26 MDTGFIHIYYGNGKGKTTAAVGLAVRCAGRGGQVWFAQFLKAGNTGELTIFSRIPEITVW RAGGPSKFTSQMTAAERLQTAARQNRLWRRLLHHCHEAPPDLLVLDELLVAMSLGFIPEK EIIRFFHTKPPQTEIVLTGHTPSRKLLAAADYISQITAVKHPFTRGIPARIGIEK >gi|290781207|gb|ADGP01000020.1| GENE 201 204891 - 206102 1063 403 aa, chain + ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 1 352 11 362 403 276 39.0 7e-74 MIKTIIQHTVSNYQEITDKKVRERYSIVGGILGIICNILLCLGKLGIGTYTGSIAIISDA FNNLSDMCSSVISILGAKLSNKPADAEHPFGHGRFEYLASLSIAILILIVGFSLCETSFH KFFQPIHVEQSYIGVFILLFSIAVKLWMYSYNTYIGKTIRSGVNLATAADSITDAVATGG VLLATLLQAYTTLPLDAVAGLLIGLLIMYTGFTIAKDVINILLGKAPDPQLVREITDCAR ACHYVTGVHEIRIHDYGPGRMFASMHVEIPDTTNLVEAHAVLDNLEDELQEKYNMEINLH MDPLCTNPQIITRVRHCLNEIIQTEFPRYETHHLRITAGMVRLNVICDLYVPPGELEIIP LSIIRLKINEALQQYDRNYHIFLDKVYELPKSPNSKVLSSPWG >gi|290781207|gb|ADGP01000020.1| GENE 202 206365 - 206484 192 39 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968752|ref|ZP_06560290.1| ## NR: gi|290968752|ref|ZP_06560290.1| hypothetical protein HMPREF0889_0401 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0401 [Megasphaera genomosp. type_1 str. 28L] # 1 39 1 39 39 78 100.0 2e-13 MLSVTRDNHIKITRGDSAILQLAWEDEHGVPYLPTEADG >gi|290781207|gb|ADGP01000020.1| GENE 203 206798 - 207019 385 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290968753|ref|ZP_06560291.1| ## NR: gi|290968753|ref|ZP_06560291.1| hypothetical protein HMPREF0889_0402 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0402 [Megasphaera genomosp. type_1 str. 28L] # 1 73 1 73 73 111 100.0 1e-23 MSKFTYYVLLDLRHKGIIIKWSSEFEGYEYIPREKKWDRNDIMYEYFWEDDPKYEMYEEI TEAEAMKRIAEMK >gi|290781207|gb|ADGP01000020.1| GENE 204 207254 - 208096 684 280 aa, chain - ## HITS:1 COG:no KEGG:HTH_0879 NR:ns ## KEGG: HTH_0879 # Name: not_defined # Def: hypothetical protein # Organism: H.thermophilus # Pathway: not_defined # 13 109 225 320 378 90 43.0 6e-17 MAIQLGKNNEDGLKRAVYVAVQEKSRYVAERIARTESARAWADGFIARYETDDTVAAYRW EVSSAHPCTDVCDMYANADLWGLGKGIYPKDQCPTLPAHPHCLCYLSPIYEGEVDLNEQQ DLREEGGNHWLQKQSKDVQRQLLGVQGAKAWEAGRPWQDILRNYSPAVMKSRVKYLPIDR SMLYYKQMKEIEPTISKVIQEVAKATETKLAGFECRIKEIDSYQRKIKEHFDLGDENYRA KDIVRYTYLAEADNLVDKIKEIRQKLEDKGYKTVEVKIHG >gi|290781207|gb|ADGP01000020.1| GENE 205 209085 - 209774 466 229 aa, chain + ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 8 228 2 221 224 113 31.0 3e-25 MKYDKTKKILLIEMTKELSSAFSIECKNSDYSFISVYSEKSAFDSLLMTSFHAALLHMQS RNDHTLSLCNTLRKKYNFPILILSRFDDINTKVSAFEAGANDYIVKPFSLHELFARIKNL ITIWNGNINTEAEITCGNLSLNPCTKTTCFFDTHVFLTCKEFYLLHYFMIHPNIILTRSH LIHSVWDPALISTSNIVDVTVGKIRKKLNAVNEFNNLQTIRGMGYIFKM Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:56:45 2011 Seq name: gi|290781052|gb|ADGP01000021.1| Megasphaera genomosp. type_1 str. 28L contig00039, whole genome shotgun sequence Length of sequence - 173539 bp Number of predicted genes - 152, with homology - 148 Number of transcription units - 56, operones - 36 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 82 - 1644 2081 ## COG0513 Superfamily II DNA and RNA helicases - Prom 1665 - 1724 10.3 - TRNA 1850 - 1925 91.8 # Lys CTT 0 0 2 2 Op 1 . + CDS 2045 - 2146 90 ## 3 2 Op 2 5/0.000 + CDS 2203 - 4326 1738 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 4 2 Op 3 . + CDS 4342 - 6459 1773 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 5 2 Op 4 . + CDS 6530 - 7249 460 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 7266 - 7320 17.9 - Term 7251 - 7311 19.0 6 3 Op 1 . - CDS 7344 - 7574 329 ## Vpar_1663 hypothetical protein 7 3 Op 2 . - CDS 7558 - 8298 366 ## COG1768 Predicted phosphohydrolase 8 3 Op 3 . - CDS 8311 - 9096 681 ## COG1085 Galactose-1-phosphate uridylyltransferase - Prom 9119 - 9178 9.8 + Prom 9118 - 9177 7.1 9 4 Op 1 . + CDS 9202 - 10269 488 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 10 4 Op 2 . + CDS 10293 - 11501 900 ## COG1408 Predicted phosphohydrolases + Term 11502 - 11555 18.8 11 5 Op 1 2/0.000 - CDS 11522 - 12613 753 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 12 5 Op 2 2/0.000 - CDS 12634 - 14151 1289 ## COG0606 Predicted ATPase with chaperone activity 13 5 Op 3 . - CDS 14160 - 14528 163 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase - Prom 14563 - 14622 10.3 - Term 14635 - 14683 16.5 14 6 Tu 1 . - CDS 14698 - 16980 2131 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 17021 - 17080 5.1 15 7 Op 1 . - CDS 17091 - 18002 1068 ## COG0583 Transcriptional regulator 16 7 Op 2 . - CDS 18030 - 19775 1162 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 19880 - 19939 7.7 17 8 Op 1 6/0.000 + CDS 20253 - 21974 1822 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 18 8 Op 2 30/0.000 + CDS 21987 - 23243 1296 ## COG0065 3-isopropylmalate dehydratase large subunit 19 8 Op 3 10/0.000 + CDS 23246 - 23764 659 ## COG0066 3-isopropylmalate dehydratase small subunit 20 8 Op 4 . + CDS 23736 - 24800 1308 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 21 8 Op 5 . + CDS 24882 - 25037 178 ## + Term 25093 - 25145 19.1 - Term 25141 - 25188 15.7 22 9 Op 1 . - CDS 25198 - 26379 985 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 23 9 Op 2 . - CDS 26340 - 27782 977 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 27838 - 27897 6.5 + Prom 27893 - 27952 9.3 24 10 Tu 1 . + CDS 27997 - 28848 1078 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 28858 - 28887 1.4 + Prom 29099 - 29158 10.9 25 11 Op 1 49/0.000 + CDS 29206 - 30216 1265 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 26 11 Op 2 5/0.000 + CDS 30183 - 31085 973 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 27 11 Op 3 5/0.000 + CDS 31109 - 32677 1578 ## COG0747 ABC-type dipeptide transport system, periplasmic component 28 11 Op 4 44/0.000 + CDS 32685 - 33686 528 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 29 11 Op 5 . + CDS 33679 - 34551 556 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 34564 - 34599 4.3 + Prom 34608 - 34667 11.2 30 12 Op 1 3/0.000 + CDS 34721 - 35683 975 ## COG0859 ADP-heptose:LPS heptosyltransferase 31 12 Op 2 . + CDS 35715 - 36758 850 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 32 12 Op 3 . + CDS 36736 - 36951 153 ## gi|290968788|ref|ZP_06560325.1| conserved hypothetical protein 33 12 Op 4 . + CDS 36951 - 38960 1897 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 39115 - 39155 7.8 34 13 Tu 1 . + CDS 39649 - 40620 925 ## COG3584 Uncharacterized protein conserved in bacteria + Term 40675 - 40726 12.2 - TRNA 40772 - 40848 83.7 # Arg TCT 0 0 - TRNA 40857 - 40930 86.2 # Gly TCC 0 0 - TRNA 40941 - 41017 91.8 # Pro TGG 0 0 35 14 Tu 1 . + CDS 41409 - 42824 1779 ## Vpar_0555 S-layer domain protein + Term 42828 - 42879 7.9 36 15 Tu 1 . + CDS 43159 - 44592 1793 ## Vpar_0555 S-layer domain protein + Term 44607 - 44640 3.1 + Prom 44701 - 44760 5.7 37 16 Tu 1 . + CDS 44923 - 46401 1840 ## Vpar_0227 S-layer domain protein + Term 46412 - 46453 8.3 + Prom 46521 - 46580 4.7 38 17 Tu 1 . + CDS 46745 - 48181 1690 ## Vpar_0227 S-layer domain protein + Term 48191 - 48245 10.1 + Prom 48258 - 48317 4.3 39 18 Op 1 . + CDS 48342 - 49268 1176 ## COG0523 Putative GTPases (G3E family) 40 18 Op 2 7/0.000 + CDS 49253 - 50860 1508 ## COG0701 Predicted permeases 41 18 Op 3 . + CDS 50861 - 51604 832 ## COG3689 Predicted membrane protein 42 18 Op 4 . + CDS 51673 - 51876 371 ## gi|290968799|ref|ZP_06560336.1| twin arginine-targeting protein translocase, TatA/E family 43 18 Op 5 . + CDS 51876 - 52388 487 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Term 52430 - 52504 13.7 - Term 52435 - 52477 11.1 44 19 Tu 1 . - CDS 52494 - 53186 364 ## COG2968 Uncharacterized conserved protein - Prom 53215 - 53274 10.9 + Prom 53160 - 53219 8.2 45 20 Tu 1 . + CDS 53467 - 54768 1554 ## COG0422 Thiamine biosynthesis protein ThiC + Term 54769 - 54828 5.7 - Term 54760 - 54809 9.5 46 21 Tu 1 . - CDS 54852 - 55079 61 ## - Prom 55122 - 55181 9.6 + Prom 55116 - 55175 10.4 47 22 Op 1 . + CDS 55216 - 58890 4613 ## COG5295 Autotransporter adhesin + Prom 58935 - 58994 2.4 48 22 Op 2 . + CDS 59071 - 59412 487 ## PROTEIN SUPPORTED gi|121533790|ref|ZP_01665617.1| ribosomal protein L19 + Term 59421 - 59468 9.1 49 23 Tu 1 . - CDS 59468 - 59791 329 ## COG1742 Uncharacterized conserved protein - Prom 59827 - 59886 7.9 + Prom 59786 - 59845 8.6 50 24 Op 1 . + CDS 60001 - 62463 3177 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 51 24 Op 2 . + CDS 62456 - 62542 85 ## 52 25 Op 1 . + CDS 62644 - 63702 1263 ## COG1186 Protein chain release factor B 53 25 Op 2 . + CDS 63756 - 65810 2047 ## Vpar_0803 hypothetical protein 54 25 Op 3 . + CDS 65803 - 66936 1224 ## COG2327 Uncharacterized conserved protein 55 25 Op 4 28/0.000 + CDS 66965 - 67651 368 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 56 25 Op 5 2/0.000 + CDS 67641 - 68519 1070 ## COG2177 Cell division protein 57 25 Op 6 1/0.000 + CDS 68523 - 69770 1503 ## COG0739 Membrane proteins related to metalloendopeptidases 58 25 Op 7 . + CDS 69781 - 71052 1514 ## COG0793 Periplasmic protease + Term 71080 - 71117 8.0 + Prom 71131 - 71190 6.7 59 26 Op 1 . + CDS 71218 - 72765 1836 ## COG1070 Sugar (pentulose and hexulose) kinases 60 26 Op 2 . + CDS 72788 - 74197 1538 ## COG0362 6-phosphogluconate dehydrogenase 61 26 Op 3 . + CDS 74224 - 75096 836 ## COG1737 Transcriptional regulators + Prom 75114 - 75173 6.9 62 27 Op 1 . + CDS 75194 - 75820 725 ## COG1994 Zn-dependent proteases 63 27 Op 2 . + CDS 75832 - 76371 665 ## gi|290968818|ref|ZP_06560355.1| hypothetical protein HMPREF0889_1059 + Prom 76375 - 76434 5.9 64 27 Op 3 . + CDS 76466 - 77317 1100 ## COG0501 Zn-dependent protease with chaperone function + Term 77341 - 77399 21.0 + Prom 77389 - 77448 10.1 65 28 Op 1 . + CDS 77484 - 79220 1591 ## COG1001 Adenine deaminase 66 28 Op 2 . + CDS 79239 - 80357 1318 ## COG1454 Alcohol dehydrogenase, class IV + Term 80380 - 80424 15.3 + Prom 80579 - 80638 8.5 67 29 Op 1 . + CDS 80723 - 82699 2248 ## COG0608 Single-stranded DNA-specific exonuclease 68 29 Op 2 7/0.000 + CDS 82713 - 84914 2750 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 69 29 Op 3 1/0.000 + CDS 84911 - 85360 590 ## COG1490 D-Tyr-tRNAtyr deacylase 70 29 Op 4 . + CDS 85391 - 86032 748 ## COG0491 Zn-dependent hydrolases, including glyoxylases 71 29 Op 5 . + CDS 86036 - 87115 1298 ## COG0628 Predicted permease 72 29 Op 6 . + CDS 87102 - 87617 756 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 73 29 Op 7 . + CDS 87610 - 89061 1286 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 74 29 Op 8 13/0.000 + CDS 89061 - 90329 1496 ## COG0124 Histidyl-tRNA synthetase 75 29 Op 9 . + CDS 90333 - 92126 2074 ## COG0173 Aspartyl-tRNA synthetase + Term 92136 - 92171 3.2 + Prom 92151 - 92210 5.1 76 30 Tu 1 . + CDS 92230 - 92790 635 ## COG0681 Signal peptidase I + Term 92858 - 92900 5.5 77 31 Op 1 . + CDS 92926 - 93456 426 ## COG0780 Enzyme related to GTP cyclohydrolase I 78 31 Op 2 . + CDS 93520 - 93891 538 ## gi|290968834|ref|ZP_06560371.1| hypothetical protein HMPREF0889_1075 + Term 93897 - 93930 5.4 79 32 Tu 1 . + CDS 93960 - 94604 709 ## COG0177 Predicted EndoIII-related endonuclease + Prom 94629 - 94688 8.0 80 33 Op 1 . + CDS 94728 - 95123 527 ## gi|290968836|ref|ZP_06560373.1| hypothetical protein HMPREF0889_1077 81 33 Op 2 . + CDS 95204 - 95590 565 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 95637 - 95676 8.0 - Term 95624 - 95663 8.0 82 34 Tu 1 . - CDS 95697 - 97292 1671 ## COG4108 Peptide chain release factor RF-3 - Prom 97425 - 97484 8.3 + Prom 97384 - 97443 9.1 83 35 Tu 1 . + CDS 97509 - 97967 440 ## COG1959 Predicted transcriptional regulator + Term 98019 - 98064 7.6 + Prom 98240 - 98299 6.8 84 36 Op 1 . + CDS 98339 - 99526 1287 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 99535 - 99589 5.4 85 36 Op 2 . + CDS 99600 - 101414 1520 ## COG0514 Superfamily II DNA helicase 86 36 Op 3 16/0.000 + CDS 101407 - 102198 837 ## COG0207 Thymidylate synthase 87 36 Op 4 . + CDS 102198 - 102695 600 ## COG0262 Dihydrofolate reductase + Prom 102727 - 102786 7.8 88 37 Tu 1 . + CDS 102831 - 103028 371 ## COG1278 Cold shock proteins + Term 103054 - 103087 2.3 + Prom 103070 - 103129 8.5 89 38 Op 1 . + CDS 103197 - 103415 260 ## EUBELI_01434 hypothetical protein + Term 103421 - 103454 2.0 + Prom 103418 - 103477 2.9 90 38 Op 2 . + CDS 103498 - 105405 2477 ## COG2217 Cation transport ATPase + Term 105463 - 105507 11.4 + Prom 105420 - 105479 3.5 91 39 Op 1 17/0.000 + CDS 105558 - 106943 1589 ## COG0569 K+ transport systems, NAD-binding component 92 39 Op 2 2/0.000 + CDS 106945 - 107835 727 ## COG0168 Trk-type K+ transport systems, membrane components 93 39 Op 3 2/0.000 + CDS 107736 - 108392 495 ## COG0168 Trk-type K+ transport systems, membrane components 94 39 Op 4 . + CDS 108401 - 109855 1209 ## COG0168 Trk-type K+ transport systems, membrane components + Prom 109866 - 109925 8.0 95 40 Op 1 7/0.000 + CDS 110002 - 110538 816 ## COG1555 DNA uptake protein and related DNA-binding proteins 96 40 Op 2 . + CDS 110535 - 112655 1499 ## COG0658 Predicted membrane metal-binding protein 97 40 Op 3 . + CDS 112652 - 113665 1058 ## Vpar_0959 DNA polymerase III delta 98 40 Op 4 . + CDS 113697 - 117296 3652 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Prom 117299 - 117358 5.3 99 40 Op 5 . + CDS 117379 - 117711 363 ## COG4496 Uncharacterized protein conserved in bacteria + Term 117715 - 117773 16.0 100 41 Tu 1 . + CDS 117794 - 118333 471 ## gi|290968857|ref|ZP_06560394.1| hypothetical protein HMPREF0889_1098 + Prom 118338 - 118397 2.4 101 42 Op 1 7/0.000 + CDS 118422 - 119246 994 ## COG1624 Uncharacterized conserved protein 102 42 Op 2 1/0.000 + CDS 119246 - 120160 1200 ## COG4856 Uncharacterized protein conserved in bacteria 103 42 Op 3 . + CDS 120174 - 121781 1316 ## COG2509 Uncharacterized FAD-dependent dehydrogenases 104 42 Op 4 5/0.000 + CDS 121774 - 123129 1785 ## COG1109 Phosphomannomutase + Term 123164 - 123202 7.0 + Prom 123313 - 123372 2.7 105 42 Op 5 . + CDS 123414 - 125243 2042 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 125254 - 125307 13.9 + Prom 125292 - 125351 12.2 106 43 Op 1 38/0.000 + CDS 125449 - 126183 979 ## PROTEIN SUPPORTED gi|227371312|ref|ZP_03854796.1| SSU ribosomal protein S2P + Term 126210 - 126241 2.7 + Prom 126186 - 126245 3.5 107 43 Op 2 24/0.000 + CDS 126268 - 126915 943 ## COG0264 Translation elongation factor Ts + Term 126925 - 126969 5.1 108 43 Op 3 33/0.000 + CDS 126994 - 127719 958 ## COG0528 Uridylate kinase 109 43 Op 4 . + CDS 127765 - 128325 733 ## COG0233 Ribosome recycling factor 110 43 Op 5 . + CDS 128325 - 128558 140 ## gi|290968868|ref|ZP_06560405.1| conserved domain protein 111 43 Op 6 32/0.000 + CDS 128563 - 129339 783 ## COG0020 Undecaprenyl pyrophosphate synthase 112 43 Op 7 15/0.000 + CDS 129356 - 130186 939 ## COG0575 CDP-diglyceride synthetase 113 43 Op 8 17/0.000 + CDS 130199 - 131344 1169 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 114 43 Op 9 6/0.000 + CDS 131368 - 132408 1058 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 115 43 Op 10 . + CDS 132422 - 133489 1204 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 133495 - 133530 6.1 + Prom 133508 - 133567 5.9 116 44 Op 1 2/0.000 + CDS 133621 - 136908 2897 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 117 44 Op 2 4/0.000 + CDS 136901 - 138448 1380 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 118 44 Op 3 1/0.000 + CDS 138464 - 139483 1139 ## COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 119 44 Op 4 . + CDS 139537 - 139815 416 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 139829 - 139872 6.1 120 45 Op 1 . + CDS 139951 - 141102 1311 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase + Term 141105 - 141148 5.3 121 45 Op 2 1/0.000 + CDS 141191 - 141961 817 ## COG0730 Predicted permeases 122 45 Op 3 . + CDS 141973 - 142725 238 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 123 45 Op 4 . + CDS 142784 - 143749 1179 ## Acfer_0129 hypothetical protein 124 45 Op 5 . + CDS 143760 - 144122 354 ## COG3339 Uncharacterized conserved protein + Term 144129 - 144194 14.8 - Term 144126 - 144169 7.2 125 46 Op 1 . - CDS 144186 - 144575 589 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - Prom 144696 - 144755 8.7 126 46 Op 2 . - CDS 144830 - 145627 821 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 145774 - 145833 9.6 + Prom 145844 - 145903 7.8 127 47 Op 1 . + CDS 145949 - 148429 2790 ## COG0495 Leucyl-tRNA synthetase + Term 148437 - 148472 1.6 128 47 Op 2 . + CDS 148478 - 149092 483 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 149185 - 149220 1.0 + Prom 149329 - 149388 6.4 129 48 Op 1 2/0.000 + CDS 149552 - 150691 1413 ## COG1960 Acyl-CoA dehydrogenases 130 48 Op 2 29/0.000 + CDS 150769 - 151575 1185 ## COG2086 Electron transfer flavoprotein, beta subunit 131 48 Op 3 . + CDS 151596 - 152612 1273 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 152630 - 152665 5.1 - Term 152685 - 152751 14.0 132 49 Tu 1 . - CDS 152785 - 154296 450 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Prom 154284 - 154343 4.9 133 50 Op 1 6/0.000 + CDS 154525 - 156786 2381 ## COG0550 Topoisomerase IA 134 50 Op 2 . + CDS 156776 - 158089 1248 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation 135 50 Op 3 24/0.000 + CDS 158090 - 158653 757 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 136 50 Op 4 . + CDS 158656 - 160026 1245 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 137 50 Op 5 . + CDS 160036 - 161256 577 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative + Term 161264 - 161301 6.0 + Prom 161287 - 161346 6.1 138 51 Op 1 . + CDS 161380 - 162888 1433 ## COG0498 Threonine synthase 139 51 Op 2 . + CDS 162902 - 163765 1031 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 140 51 Op 3 . + CDS 163773 - 164477 712 ## COG0398 Uncharacterized conserved protein 141 51 Op 4 . + CDS 164490 - 164939 546 ## Ppro_2887 C_GCAxxG_C_C family protein 142 51 Op 5 . + CDS 164990 - 165670 653 ## gi|290968900|ref|ZP_06560437.1| hypothetical protein HMPREF0889_1141 + Term 165693 - 165735 9.1 - Term 165675 - 165729 18.4 143 52 Op 1 . - CDS 165744 - 166988 1091 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 144 52 Op 2 . - CDS 167011 - 168354 1439 ## COG0534 Na+-driven multidrug efflux pump - Term 168375 - 168415 5.6 145 52 Op 3 . - CDS 168425 - 168691 248 ## PROTEIN SUPPORTED gi|227371391|ref|ZP_03854875.1| SSU ribosomal protein S20P - Prom 168723 - 168782 7.8 146 53 Op 1 7/0.000 - CDS 168793 - 169362 748 ## COG2059 Chromate transport protein ChrA 147 53 Op 2 . - CDS 169371 - 169931 433 ## COG2059 Chromate transport protein ChrA - Prom 169957 - 170016 6.7 + Prom 169905 - 169964 9.3 148 54 Tu 1 . + CDS 170074 - 170241 99 ## gi|290968906|ref|ZP_06560443.1| conserved domain protein + Term 170289 - 170316 -0.9 + Prom 170348 - 170407 10.2 149 55 Op 1 . + CDS 170452 - 171009 741 ## COG0703 Shikimate kinase 150 55 Op 2 . + CDS 171006 - 171968 1248 ## COG0205 6-phosphofructokinase + Term 171990 - 172035 8.1 + Prom 172012 - 172071 7.8 151 56 Op 1 34/0.000 + CDS 172123 - 172791 899 ## COG0765 ABC-type amino acid transport system, permease component 152 56 Op 2 . + CDS 172778 - 173497 580 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 Predicted protein(s) >gi|290781052|gb|ADGP01000021.1| GENE 1 82 - 1644 2081 520 aa, chain - ## HITS:1 COG:BS_ydbR KEGG:ns NR:ns ## COG: BS_ydbR COG0513 # Protein_GI_number: 16077525 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus subtilis # 5 493 22 509 511 508 55.0 1e-144 MLEKFQNLKISEVILQALNAMGFEEPTPIQAESIPVALQGADMIGQAQTGTGKTAAFGIP VLEKILKNEPTQSIQTVVLSPTRELAMQVAEELNHLAQCTTIQALPIYGGQDMERQLRRL RKHPQIIVATPGRLMDHMKRGTIDLSDIHTIVLDEADEMLDMGFIDDINTIMSATPDTRQ TLLFSATMPKPIQQLAETFLHEPQIIRMKAKEVTMDLIEQSYIETPDRQKFDVLCRLLDL QEPDLAIIFVRTKRRVDEVAEALKKRGYSSEGIHGDLTQAKRDSVIRQFREKTIDILVAT DVAARGLDISGVTHVFNYDLPQDPESYVHRVGRTGRAGKSGEATTFVIPREMEHLRAIER LIKRHITRRKAPTLAQALEGAQQAAIRRLINTAEDERSGQYRGNAEELLSHYDSITLLSA AIKLLTKEPDMTPVKITEEAPLRIRRANRRTDRGTHRPGRKRKEHAERDRNHASREEHSE KRRHFAPRTRTSKDAGKAARKERTQTKEPNRSVFKPYFKD >gi|290781052|gb|ADGP01000021.1| GENE 2 2045 - 2146 90 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEWSILCLNGVENIYRLINNNDVYYQNYTREI >gi|290781052|gb|ADGP01000021.1| GENE 3 2203 - 4326 1738 707 aa, chain + ## HITS:1 COG:FN0831 KEGG:ns NR:ns ## COG: FN0831 COG1629 # Protein_GI_number: 19704166 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 31 705 24 696 698 444 39.0 1e-124 MNKFILLSLCATFTGIGVSGVVGNQIPTGTLASSYVHPDYIAMEQLRPTKDIIVITKKDI QENGYTSISEALKRQTGINVGLTGEGSIDIRGQGDQYADSNIQVLVDGVPITTLVNHPIH TNYDVVPIENIEKIEIIPGGGAVLYGSGTVGGVINITTNLRSVQRDQTTIGMRYQPGGYR MTGSIATRPNARIRITGGYTKYRENLYFQDTWQGGNYYFTAVRYEPRSGSALTFRASHLD NQGQYIQLLQTRKIQQFGKDYKPRYRDLTVGVDKDGNKIVRKIRDYSIKDRVLNTYHMTY MAPLGKFWNMEIEGFTQNGNYANFELKKMEHQTQGGMLRLSRNAGNHKWLFGMEGTTQQA KLEYNDYPEDSERPGKYLVEPLSFFYKKQLRSVFLMHTLQHHKWILTQGIRREVLYWDYD KKGAKGLAGKDSSKRYNTAAELSLAYQYADTGSVFARYERAYTVPNGIQISDKVLDQNTY KTLYVTSSAQDEIYDSYELGWRAKLGASMMKASIFYNKTDNQLCRVDTFFGMQTETKNLL QTRRRGIELSLQQQMGKWKFFEGYTYVNGSTNYNEAGREFLQAEPDSKIDYAKSGLKKVP AHKVVLRSTYMPNRRMKINAMYRYVGTYKNYLNESKKGDDREGDLVHSYGVLDVSMSYQV QPTWAIYGGITNVFNKEYYEFKEGEGPYSTITHGANRTYYIGVNYTL >gi|290781052|gb|ADGP01000021.1| GENE 4 4342 - 6459 1773 705 aa, chain + ## HITS:1 COG:FN0831 KEGG:ns NR:ns ## COG: FN0831 COG1629 # Protein_GI_number: 19704166 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 8 705 4 698 698 495 41.0 1e-139 MRKNYVAGLILLSLMGAIPVSAQEVPTAILADAYVRPEYVEIERIRHTKDIVVITKEQIK QRGYSSLSEVLASVPIINVNLTGNGDIDIRGQGADQATRNVQIMVDGAPITTLVNHPIKT DYNIVPIENIEKIEIIPGGGSVLYGSGTSGGVINITTNLRNIRQSPNTLKIEKNTAGNRL AFQFKSSINEKIYFAVGGTRQQKRLYFKDTYHNSKYAYAGIAYQDNNKKVTFRMSHLQDE GKMVGNVSIENLLKYGKHYVPNFLEVITDIDDQGHVKKEKRRSYLDGNRQANTYVITYQE QVGKRASMTTDLFYNKGYYSGPNQEKLYYTTKGTKIKLDYTYGTNNVLIGFDGYTQHGSL AYDDFKLVSFKNKLYKRVPLHFIYDKQIRGGYVLNVMNRNKWTYTQGIRRERTNWGFDKN GVNNIKGNDVSRRYNTSAELSAAYQYTPTGRVFVRYERSYTVPDGLQITDQIKDKQKQKK YVPTTAKDEQFDLYELGWRDKIGVSAVNMTVFYAYTPNQMNRFYLIDKNGLQMMTMNNLA TRRKGVELSLTQRVGKWIFSEAYAYLHGYTTYNAEGEVWTKANPHKKIDYTRSGLVKVPR HKVVLNGEYRVNPKLSLGLTYTYVGSYNNFFAEADKNMNDGGIVKSHGVFDVRFRYKSST GAIFYGGITNVGNMKYYAYKAGQGPASTIMPGNERAYYGGMSYEF >gi|290781052|gb|ADGP01000021.1| GENE 5 6530 - 7249 460 239 aa, chain + ## HITS:1 COG:FN1310 KEGG:ns NR:ns ## COG: FN1310 COG0810 # Protein_GI_number: 19704645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 130 239 132 241 242 88 40.0 1e-17 MGMVIMAKTWHPSSLTVVEIVGGGVQGERGNSTFPAPLSKSVMVAKVKNVFTPAATLSQE KEPEVKPVVRTQTAVSADSSLAVPPSVSSVPVSRGSSWSSADQHEGGIAGTAGTKGAPGT GVAGKVNSHGLGAGFVDNGDGTYTANVNATLSYRIIRDAQVTYPEEARNIGYAKTVVLHA KILVGITGMVEAVHITSSVPNLGFKEAAESALWNMRFAPIVYKGYKIKMYFQKTIYFQP >gi|290781052|gb|ADGP01000021.1| GENE 6 7344 - 7574 329 76 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1663 NR:ns ## KEGG: Vpar_1663 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 76 1 76 76 85 55.0 8e-16 MSQIAKKHLLAGIIFGDPETGEYIYLPGGEVGVREPLCVFEHARQTEDISLEKAGELVEH LTLKPCTHPRLGQRSF >gi|290781052|gb|ADGP01000021.1| GENE 7 7558 - 8298 366 246 aa, chain - ## HITS:1 COG:CAC0640 KEGG:ns NR:ns ## COG: CAC0640 COG1768 # Protein_GI_number: 15893928 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase # Organism: Clostridium acetobutylicum # 1 235 1 230 231 181 41.0 8e-46 MRLFAIGDLHLSGHPPKKPMEIFGTRWKNHWQRIQEDWKKRVGEEDTVLIAGDTSWAMRL REAQEDLNEIRALPGKKIIIRGNHDYWWESAGKLNRLDAANRMHYLYGTTVYTADRQFAV CGTHGWICPGDNHYREETDAKPYRRELLRVERTLQEAVTLHCRCTILLLHYPPVYDLTKP SGFTDLLEKYHVPLCIFGHLHGLQPHTVFPRIYNHTLLHLVSADYRECKLLEIKLDEKGV PYESDC >gi|290781052|gb|ADGP01000021.1| GENE 8 8311 - 9096 681 261 aa, chain - ## HITS:1 COG:L51063 KEGG:ns NR:ns ## COG: L51063 COG1085 # Protein_GI_number: 15672818 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Lactococcus lactis # 2 256 5 254 261 169 37.0 4e-42 MAQNPLNHLLKYNMDVGKTKPDTVHRKATYCPFCDVTHLKNILEKRGTMIWLENAYPVLK DSWQTLVIESDDCNGDFSTYTPSYALRLVEFCLEKWHQVKTMHEFASVLFYRNYGYMAGG SIHHPHTQIVGLKHYDYHEDIKHYHFVGTPILLENTVELNLSLRPIIGFYEINFILKDLG ALACLVRYMQKTARFLLRRFGDLSHSYNIFYYDFPDDTNIYIKMVPRFLTNPLFVGYMVP QIATEEAAEPFVQHLRQAVLT >gi|290781052|gb|ADGP01000021.1| GENE 9 9202 - 10269 488 355 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 11 307 11 299 378 192 34 9e-48 MVIETINERQWSSRLLAWFAQHRRDLPWRTEPRDPYHVWVAEIMLQQTKVEAVRPYYENW LHVFPTMEALAAAEPDEVLRQWQGLGYYSRARNLHAAVREVMTKYGGTVPQTAKEIRTLK GIGEYTAGAILSIAYGQDETAVDGNVLRIFARVYGIARNILSSRVKKEITQLVAAQLPTG KAGMFNEALMDFGAMVCIPKTPHCEVCPLMTMCRAYCAGREKELPIRVTRKKVPVENRTV VMIRKQGAWLIHRRPPTGLLASMWEFPNVPGKGPDGREAVRQLLAQVGGQVAIESHPLAT REHVFSHKKWRLTIYAGTWCGGTLLAGKEWQWLPIRAYTTVPWAGPHGKLTALEA >gi|290781052|gb|ADGP01000021.1| GENE 10 10293 - 11501 900 402 aa, chain + ## HITS:1 COG:BS_ykuE KEGG:ns NR:ns ## COG: BS_ykuE COG1408 # Protein_GI_number: 16078469 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 142 396 42 284 287 88 28.0 2e-17 MISLSIGAVLTAFILEKIGHVRKLYSGKAIVFLWAFATSVFLWYAVAFPYIALHSFTGDT QLVGIVSLSVVLGLFLAAPPVGVLGMVFFFRAWRKPKGEKIGDVAGVSRREFVTRAAFAV PIVTMGAAAFCNVQGSRHLALTRHTLYFPDLPDYLNGYRIAQISDPHMGLFFRPQQLGEA MELAAYAGADRLEITGDLIDELSLLRPCRDILQEKGKLFRDGMDFCYGNHEYYRNVEKIT AMLRTTGIRILKNTSYCVSAGGGVGLHDRGGNDPRSFYIGAVDFSFAKGKRFAAERRQFM ERTLQSVRQEAFFILLAHHPAFIREAFAAQIPLTLCGHTHGGQIAPLAPMIRAGIFPYLR GLYSNHTSYAYVNRGTGDWLPVRILCSREVSVFELRKGKRPS >gi|290781052|gb|ADGP01000021.1| GENE 11 11522 - 12613 753 363 aa, chain - ## HITS:1 COG:FN1068 KEGG:ns NR:ns ## COG: FN1068 COG0758 # Protein_GI_number: 19704403 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Fusobacterium nucleatum # 76 357 6 284 288 194 39.0 3e-49 MEPELLYLAALQSVPGLGIHRLRTLLHTFPTAQAVWQAPVAALRTCKLPASVIENLQKHR QQWSAEDLLKKLKTYNTRLLSIHDPAYPDLLKATASPPYILYYQGVLPPPHTLSIAVVGA RKATPYGGNIAQTLCRTWAQNGIVIISGGARGIDTRAHRGALSGKGKTFVVVASGLDITY PRENKKLFEEIAANGGGIISEYPFGVPPQAPNFPARNRLLAGLSHGTVVVEAAARSGSLI TADFALEEGRDVFTVPGSIYSQMSRGSNALLRNGAIPLTCAEDLLEEYHRTAPVAAPTRP FTLSLEEETLLHAISYETPVSSEDLLVKTGLPVTRLTALLLQLQLHQLIETWNGTQYIRK AGT >gi|290781052|gb|ADGP01000021.1| GENE 12 12634 - 14151 1289 505 aa, chain - ## HITS:1 COG:slr0904 KEGG:ns NR:ns ## COG: slr0904 COG0606 # Protein_GI_number: 16331658 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Synechocystis # 1 499 1 503 509 454 46.0 1e-127 MFARIYGSTILGLQGNIITVETDIGNGLPSFEIVGLATTAVKESKERVRSALKNSGYEFP MRRITINLAPADLKKDSAGLDMAIGLGILVAGGQLPPAAANRTLFIGELALDGKIRPVTG ILPMLLQGRAQGFTTVFLSSENEAEGALCPDMTVYPAHTLTEVYEHLCRRTPLAAAELTA KEAGEPEYKVDFSEVQGQYMAKRALEIAAAGGHNVLMVGSPGAGKTMLAKRIPTILPPMN LQESMEVTKIYSVSGLFHDAHMLTERPFRSPHHTISMAGLIGGGSIPKPGEVTLSHNGVL FLDELPEFPRAVLEVLRQPLEDGRVHLSRVQAALSYPARFILIAAMNPCPCGYLHDADHA CSCTAGEIRRYVRKISGPLLDRIDLHVPVERPKYAELTATLPQESSLTIRRRVLAARRRQ CRRLAPYQLYCNAHMGHREIKETCPIEPAGQELLEQIFETLKLSARSFDRIIKVSRTIAD LAQADTITAEHLAEAVSYRNTLPKT >gi|290781052|gb|ADGP01000021.1| GENE 13 14160 - 14528 163 122 aa, chain - ## HITS:1 COG:CAC1763 KEGG:ns NR:ns ## COG: CAC1763 COG0792 # Protein_GI_number: 15895040 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Clostridium acetobutylicum # 4 101 6 102 122 83 45.0 1e-16 MNTKILGNIGEDIALAYLKKQRGYTVLCRNYRLRTGEIDIIAAHNRTLVFIEVKTRNSLQ CGHPAEAVSPHKQKQIIRTAEMYLSAHNITDMPCRFDVIEIFPRISPPRQVHHIIHAFLP SS >gi|290781052|gb|ADGP01000021.1| GENE 14 14698 - 16980 2131 760 aa, chain - ## HITS:1 COG:Cj1201 KEGG:ns NR:ns ## COG: Cj1201 COG0620 # Protein_GI_number: 15792525 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Campylobacter jejuni # 1 755 1 753 754 939 60.0 0 MQTSIIGYPRVGTLRELKFATEKFFKQEISETQLQETGREIRRRQWQLQKASGLDFIPSN DFSFYDLMLDTAVLFNCIPKEYKKAGFTALDTYFAMARGYQGEKGDVKALAMKKWFNTNY HYIVPEVEDDTEISLTGTKPFTEYQEAAALGIQTKPVLIGPFTFLKLLRYKGRKNAAAIA PSLGAAYAAAVQKLQSLGATWIQLDEPYLVHDITGDDLQLLKNVYAPIFAAKSTGKLLLQ TYFGDIRDCYKDLLQLPFDGIGVDFIEGKETQHTVFSCAFPKDKVLFAGLLNGKNIWRNH YPKTLEILQKLQAAGIPVVLNTSCSLLHVPYTLQHETKLDDSYKAHFAFAEEKLTELAEL KSLSALSDPTKEPAYIANAALFTNRHDCVDEAVRQRLSTIRDSDFTRQPAFAERAACQKK AFRLPLFPTTTIGSFPQTADVKAARTARRKGEWTEREYIDFNRKKIADCLRLQEELGLDV LVHGEFERNDMVEYFGEHLKGFLFTEKAWVQSYGTRCVKPPIIWGDVSRRQAITVPWSTY AQSLTEHPLKGMLTGPVTILNWSFPREDISLKESTYQIALAIRDEVLDLEKNGIRIIQID EAALREKLPLRKSDWFREYLDWAIPAFRLVHSGVRPETQIHTHMCYSEFTDIIHAIDQMD ADVITFEASRSDLQILDSLLENKFQTAVGPGVYDIHSPRVPSVEEIKTAVHKMLAKIPAE KLWINPDCGLKTRGLAETSASLKNMVQAAREIRREQDAEK >gi|290781052|gb|ADGP01000021.1| GENE 15 17091 - 18002 1068 303 aa, chain - ## HITS:1 COG:SP0676 KEGG:ns NR:ns ## COG: SP0676 COG0583 # Protein_GI_number: 15900577 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 294 21 314 322 326 55.0 3e-89 MTLQQLRYIIAIAECGSITSAAKQLLVAQPSVSKAVTDLEAEMGITIFYRNNRGVFVSDE GSKFLSYARQVIEQADLLEQQYTKKEVSRRVFAISAQHYAFVVNAFVSLVKEYDKNKYEF TLRESRTYDIIEDVQKGRSELGVLFLSKFNRQILCRTLDHAGLTFTSLFTAKPHVFISRH NPLAKKDTVTLKDLQPYPRLTYEQGLNNSFYFSEEPHSVEESPKSIVVTDRATLFNLLIG LGGYTISSGILSRDLNGNDIIAVPLKSEEIMEIGYIAPHDRPLNTISMRYIEHLKLYIAG CRK >gi|290781052|gb|ADGP01000021.1| GENE 16 18030 - 19775 1162 581 aa, chain - ## HITS:1 COG:lin1943 KEGG:ns NR:ns ## COG: lin1943 COG1293 # Protein_GI_number: 16801009 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Listeria innocua # 9 573 1 560 570 240 29.0 6e-63 MIVQAGVIMNIDGITLQCITKELQKELTGGQITKIYQPRARTLYFRIFSATGLHHVIITL DESPRIYIAEKMPPMPDTPSALCMFLRKYYENGRISSLRQLHLDRLLEIDVDILNVSGTL VTRKIHVELMGKYSNVIFTEDGIILEALIKTGHHKTALRTIAPKEPYGFPPNFMRMDPFA FCAEELSAFMTPGEEEELGKWMLQRFNGISTVVLRELSYRTGIDYTRSVDTLSDSERFAW CRAVERFGQELTNITGIYVYTREKKDILFPLALDSLQNLPHRHLTDIQTYLNTYQQQQGS LNGEQEELKKQVGKRIEKQKKKIRRMTAEIKETEKMDLYKLYGDLLMIHAYLPWHHETQI TVPDLLSETQEPLSIPLHPAYSLTDNANRYYKKYTKLRRRKEMSQSLYQENETFLHYLYS LEYALETVTDKEEIEEVKAEMRQTRLLSSGRKERSKKESCRQIQSVTVDGMQVYIGHNNR QNDFLTGKKAHPYDLWFHAKNLPGSHVVLACHGQTPTPRQIERTAQIAAYYSKGRNAAKV EVDAALIKHVKKPPHAAPGFVLFTHQQTYRVSPQAPATDDK >gi|290781052|gb|ADGP01000021.1| GENE 17 20253 - 21974 1822 573 aa, chain + ## HITS:1 COG:CAC0273 KEGG:ns NR:ns ## COG: CAC0273 COG0119 # Protein_GI_number: 15893565 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Clostridium acetobutylicum # 24 548 17 552 558 541 50.0 1e-153 MKTVQRYQKGYFLPPQTDWSWIRQEYPQQAPHWCSVDLRDGNQALVTPMCLEEKIAFYQM LLRIGFKEIEVGFPAASETEYQFLRYLVTHDLIPEEVTIQVLTQARENIIKKTFAALKDV PRAVVHVYNSTSLAQRQQVFRKSRREVKELAVQGAELVREWAEKTAGNFRFEYSPESFTG TEPEYALEVCNAVLDVWQPSVERKAIINLPATVEMSLPHVFAAQVAYMSRYLHYREATVL SVHPHNDRGTGIAAAEMALLAGAERLEGTLFGNGERTGNVDLVTVAMNMKALGVATQLDF SFLPDIVSAYETLTRMTVPPRQPYAGKLVFAAFSGSHQDAIVKGMHFRREHPQAPWTCPY LYIDPQSVGRTYDADVIRINSQSGKGGVAFVLEEQYGLQIPKALREDFSYYIKGISDRQQ RELQAAEIYQLFRQRYEPHSDGMYVESFAVHKTGNRWQAKAVLVYGAEKQVVEGVGNGQL QAITNGICAACGLDIADLVYSEHDLDGGTGSRGMAYIGITDKTGITAWGIGVDTDTMTAA VQAFTGAVQHHPVFSKQMSFQRRILSAIAVGGR >gi|290781052|gb|ADGP01000021.1| GENE 18 21987 - 23243 1296 418 aa, chain + ## HITS:1 COG:PAB0891 KEGG:ns NR:ns ## COG: PAB0891 COG0065 # Protein_GI_number: 14521549 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Pyrococcus abyssi # 1 418 1 421 423 501 58.0 1e-141 MGMTLTEKILARHSHRETVHPGDLIICEVDLVLANDITAPPAIKEFEKIGRPVFDAEKIA LIPDHFTPNKDIQSAALAKQVRDFSRRHRIRHYYEVGRVGIEHVLLPEQGLVGPGMITVG ADSHTCTYGALGGFATGVGSTDLGVAMATGKAWFKVPESIQVYVHGTKSPYVTGKDLILS LIGRIGVDGALYKSLEFTGPGLSELTMSERLTIANMAIECGAKNGIFPVDDSTLKYEADR FLKPFEIVAADSDAEYCRRIDVDLSLLRPVVAFPHLPENTKPVGTFDPIPIDQVVIGSCT NGRLEDLAQAAAIFANRSVHPEVRCIIIPGSPTVYKEALQAGYLETFINAGCAVAAPTCG PCLGGYMGIMTAGERCVSTTNRNFRGRMGHVESEVYLAGPQVAAASAVLGKIAAPWEV >gi|290781052|gb|ADGP01000021.1| GENE 19 23246 - 23764 659 172 aa, chain + ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 1 159 1 159 164 201 57.0 4e-52 MEITGNIWKYGDHVDTDVIIPARYLNTFDPKVLAAHCMEDLDPEFASRVRPGDFLVGGWN FGCGSSREHAPLAIKACGIRVVIAAGFARIFYRNAINVGLPVLEIGKCAEEIKSCRSLRV NMATGTISDVHTARCWHARPLPGFIRDIAAAGGLIAYVKGGGLDEKNCGYSR >gi|290781052|gb|ADGP01000021.1| GENE 20 23736 - 24800 1308 354 aa, chain + ## HITS:1 COG:aq_244 KEGG:ns NR:ns ## COG: aq_244 COG0473 # Protein_GI_number: 15605790 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Aquifex aeolicus # 3 353 5 356 364 361 50.0 1e-100 MKKIAVIPGDGIGQEIMQAAVAVLRRTTELYGIDIQLQQYEAGGTAYDRTHTPLPEQTVR AALAADGVLFGAVGGDRWDHLPPALRPEQAVLGLRKALGVYANLRPITVRPYLASYSPLK EEIVRGTDILIVRELAGGIYFGAREEAAEEAGKMRAWDTETYSVSEIERIARTACIAAKQ RRRHVTSVDKANVLATSRLWRRTVQRSAATAEVTLDHMYVDNCAMQLVRCPTRFDVLLTS NMFGDILSDEASVLGGSIGMMPSASLGEKTGLYEPIHGSAPDIAGKNIANPCGTILAAAM LLRHSLGKPEAAAAIEHAVDAALQEGWRTADMYRDGMKRASTADMGAAVLRQLR >gi|290781052|gb|ADGP01000021.1| GENE 21 24882 - 25037 178 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDIKKEESAEEKQKRLEALFKQFGIRQSHDVRILQRVRDSMASMPRRPKR >gi|290781052|gb|ADGP01000021.1| GENE 22 25198 - 26379 985 393 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 7 384 423 807 815 384 51 1e-105 MRTQAIKKEIDSVKGEMEKAEREYNLAKASELKYGKLPELQQKLKEQEGYLADHRESQLL KEEVSEEDIAQVVSRWTGIPVTKMMTGEREKLLHLDDTLHARVVGQEEAVQVVSDAIIRA RAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAEALFDDERNIIRIDMSEYMEKHTVSRLI GAPPGYVGYDEGGQLTEAVRRHPYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRVV NFKNTVIIMTSNLGSHEILNAADFTTAEKSVRELLKQYFRPEFLNRIDDIIVFKGLQKDQ VRHIAQILLQRLSERLERQVNIRLTWTDAALQALGDRGFEPQFGARPLRRLITHTVETAL SRDIIAGTIREGDTVSIDYDGSSFTFTPVHTEN >gi|290781052|gb|ADGP01000021.1| GENE 23 26340 - 27782 977 480 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 459 5 468 815 380 44 1e-104 MENEKYTQKVMAAFQAAQQIAALRYHQEITAAHLLLSLVKEPEGLLTTIFADCHTDVPML QARLEQVLNKIPAVQGQSRLSMATEMVRVLGRARQLADAMHDEYISTEHILCALVQDSDE EVRSLCQEFGLTKDKIMSSIKANRKGNVNTDKPEDNYKALEKYGRDLTAAAGKNKLDPVI GRDEEIRRTIEILSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKHKTLYSLD MGSLIAGAKYRGEFEERLKAVLNEIAKSDGRILLFIDEIHTVVGAGASEGSMDAGNLLKP MLARGELRCIGATTLNEYQKYIEKDAALERRFQPVMVEQPNVEDTVTILRGLKDRYEVHH GVRIRDNALVAAAVLSDRYISDRFLPDKAIDLVDEAAAKLRTEIESMPAPLDELRHKVMQ LEIEEQSLTKETDEASQERLRKIKDKKDELQKKEKRYKKNGIRKNKPSCVHKPLRKKSIR >gi|290781052|gb|ADGP01000021.1| GENE 24 27997 - 28848 1078 283 aa, chain + ## HITS:1 COG:ECU11g0430 KEGG:ns NR:ns ## COG: ECU11g0430 COG0790 # Protein_GI_number: 19074843 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Encephalitozoon_cuniculi # 58 270 196 408 590 121 32.0 2e-27 MDDQERNSLIRQAAAGNKKAWQEITALAFTGDIKAQLFLGNHYYEEGQGDVAKAFYWFMR AAKQEDARGQFFVGELYETGRGAPHDFSRALYWYRLAAAQDDAYAETRIGNFYENGIGVD QDYQKAWYWYRRGADHGDGAAQCNCGIFLQFGYVGDADFAGAADWYKKGAAQGDPSARNN LGYMYENGLGVEKNFATAKMYYELAALDGDGMAQNNLGKLCRDGRGCRKDLTEAAYWFAQ AAMNDCEEGIKNYIQALEEGAGIAKDPEEAAFWRHKLYVLQHT >gi|290781052|gb|ADGP01000021.1| GENE 25 29206 - 30216 1265 336 aa, chain + ## HITS:1 COG:BH3638 KEGG:ns NR:ns ## COG: BH3638 COG0601 # Protein_GI_number: 15616200 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 5 322 2 322 322 169 32.0 8e-42 MKVPYKAIGKNIAVFFISLAVLSGVVFFAASYAPGDPLQSYYGDAVDQMSTAQYEAARHR WGLDQPVYKQYFQWVDRSLHGEMGMSLKYREPASRVIHDFVGNTLFLGIVSYILIFIFAI VVAVCCVLYEGRWLDTLLSETGTILFYLPAFWVGLLLILIFNVNLGWLPGSGAYDPGEAG NWGSRAEHIVLPVIVMLISHVWYYAYMIRNKLLDETRKDYVLLAKMKGLGRLKIVLSHCL RNVAPTIFSVMAIGVNHIVGGTYVVEAVFAYPGLGNLAVESAKYHDYNVLILVVLLTGAV VIAAGLAAQAVSARLDKRMKTEGGTAWTKTNGHLPS >gi|290781052|gb|ADGP01000021.1| GENE 26 30183 - 31085 973 300 aa, chain + ## HITS:1 COG:BS_dppC KEGG:ns NR:ns ## COG: BS_dppC COG1173 # Protein_GI_number: 16078359 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 27 294 48 315 320 165 33.0 1e-40 MDKNERAFTVVGAGRRKELDVIPVSPWRQVIADIPRVSAVILLLVVLGCILAPCIANHDP EAFYLQHLNEPPNHEFYFGTDMLGRDIFSVLWYGGRLSLVIGVLATVVSSGIGMVYGCIS GTAPDWLDSALMRIAEILCSIPYLLLQLLLLACIGQAHVISISLVIGVTTWMNLARIVRS EVRQIRGSEYVLAARAMGGGFFYILRHHLLPNFISPVLFMLVSSIGISMTMEATLSFLGI GLPTEVTSWGTMLALSTRALMTDSWWIIIIPGCFLIITLLCITHIGHHLRREINRGSSNL >gi|290781052|gb|ADGP01000021.1| GENE 27 31109 - 32677 1578 522 aa, chain + ## HITS:1 COG:Cj1584c KEGG:ns NR:ns ## COG: Cj1584c COG0747 # Protein_GI_number: 15792889 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Campylobacter jejuni # 55 518 43 509 511 288 35.0 2e-77 MKKKRSILSYITAFIMAVMCMFAFAGCGSQGGNAGKTLTFAGPDYKTLNSILNTHDELPS LIFSGLMKYDGQNKPVPDLATSYDFDKNTLTYTFHLRKNVTWHDGQPFTADDVKFTLDTL RLNKDIDDEISDNYKEIKAVDVVDPQTVKVELSKPSAAMLDYLTIGILPKHCLEGKDIMT DPFNQKPIGTGRYKFVSWDKGQSIILQKNDKYYGTIPKIDRLIFKIIPDETAKAAQLKSG GADVALLNAKDAATFRNNNHFKVYDCQTADFRAIGPNFKNPYWQNPEHQALIPVLGYALD KKAIIAGVLNGEGEAAYSPIQLNAVYNDPTMDHMDYNPTLFKQRMAALGWKLGSDGIYEK NGEKLSFSVDARDFEEERVDMAKIASAQFKKLGVDMKVNVVPKFNWKTMQCCLIGQATPF DPDAGLYNFFYTGAGANYTDYSNSAVDAALAAGRNSYDVGMRKNAYIQFQKAWSAHPAFI MIAFIHGNYVATNKVTGLTTDRILGHHAAGIFWNVENWDISE >gi|290781052|gb|ADGP01000021.1| GENE 28 32685 - 33686 528 333 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 15 311 33 323 329 207 39 2e-52 MDIQHLAVSFYLPQGEVKAVRGVSLSLEEGEIVVLAGESGCGKSALCRSIVKLLPRYAVV KSGHIVIGGHDITQYTEKDMQAVRGLEVGMVFQNPLTTLNPVLSIGTQLAEALKRRTSAG ARELNEQAVGLLEQVGIQQGKERLAMMPAEFSGGQRQRITLAIALASQPRLLIADEPTTA LDVTVQLRMIDLLRNLAKNSGLTVLLVTHDLGVAARIADRVGIMYAGKLVEIGTTEEIFS DPRHPYTQGLLAALPSAARVHKRLRSIPGMPPDMLHVPAGDAFANRNPRAMAIDYEEEPP FFSLSRTHRAATWTLDPRAPEEVRCPDGRKKDE >gi|290781052|gb|ADGP01000021.1| GENE 29 33679 - 34551 556 290 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 259 8 274 329 218 42 1e-55 MNEPLLRVEHIKKYFTLPSGRLLKAVDDLSFSVRTGETIGIIGESGCGKSTLARVLAGMI TPTAGNLYFKGQCIPAGKRNRNLQRAIHLVFQDSDSAFDPRMSVRESLKEALYLSGQAQG EDNRRIAELLQQVGLENRYVHAYPSELSGGQRQRAAIARALATRPQLLIADEPVASLDVS IQAQIINLLADLQEQEKFSMLFIAHDLAVVRHISDRTLVMLAGKIMEIGPTEDLFTHPAH VYTQLLSDSILPAKPHKESIATTPHLWGKDISAAGCLQEIRPGHYVRREI >gi|290781052|gb|ADGP01000021.1| GENE 30 34721 - 35683 975 320 aa, chain + ## HITS:1 COG:VC0225 KEGG:ns NR:ns ## COG: VC0225 COG0859 # Protein_GI_number: 15640255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Vibrio cholerae # 6 309 15 311 357 64 23.0 3e-10 MKHFLIFSAAYFGDTLMTGALCMNLKRMYPQCYIVFVVNKPFADAARYLNGVDEVWPLDK KGSDRSVWSKYTFLKKYERRYVFDAAFIMWKNFFGALAAKFWGAKKIYAEPGALWQRFFL TNGAIDFKHWVHVQDKMAYLSELHSHMPMESMKIRYHIPDEAMAYVKKLLQHEGRPLVLI NPLTKNKKKDFSLSLVAALAQQIDRAGYTPGMVGCGIAATRYYDALPPETGNILRNFSNR TTIPQLAALLAASRLLISADTGTAHLALTVNVPLVFVVYRNEPYRLRRWAPKSFYRAVTV SHEQAFKADDIWRAGKKWCL >gi|290781052|gb|ADGP01000021.1| GENE 31 35715 - 36758 850 347 aa, chain + ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 2 204 1 207 328 137 37.0 2e-32 MIDTPLISVIVPVYKTEQFLDRCLQSVLGQTYTHWEILLIDDGSPDHSGELCDRYAQQDK RIFVRHQPNGGLSDARNTGLSMAHGDWIYFLDSDDFLLPEEFSSLLAYSENGTYDIVAGH SVSVKNKRMITTDKDVVYENNIETIRRQSLSGRGNMATGKLIKKALFAGIRFPVGYIRED AFVMPKLYLRARNVCIVPTAYYCYSKENPESLSNGIHLENRLDFMYSGFVEGQEKLQLCK QLGYVEAQAICQKQISMCGLHYLLYCTGVKERDRHKEREVYAFIQTCPTDGLSKVKRFQQ YCVRHHWRGIIGGMGKIMILSFRLRTYFRKRRWKKYGIWQYEKTTEN >gi|290781052|gb|ADGP01000021.1| GENE 32 36736 - 36951 153 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968788|ref|ZP_06560325.1| ## NR: gi|290968788|ref|ZP_06560325.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 18 71 1 54 54 100 98.0 4e-20 MKKRQKTSDYKGYCRKFLLRINEAPVYNVNDNHNIVYGVLFLVHKACREGACTCNGEIGE NDKREKKGTKE >gi|290781052|gb|ADGP01000021.1| GENE 33 36951 - 38960 1897 669 aa, chain + ## HITS:1 COG:jhp0525 KEGG:ns NR:ns ## COG: jhp0525 COG1368 # Protein_GI_number: 15611592 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Helicobacter pylori J99 # 89 600 91 599 678 109 21.0 2e-23 MFEVFFLGAQQDLKLIIIPSIICLLFRLAFIKIYGPQRDSGEYGKKVRECLRFGFLWGLD FHAYVYLVSLVFITLPGVFFSEYRMYAGILRILLVAVYALCLYVVFMGKMIFYGEFHDIY NQTMLLGKHADKGNFFDIFFFQYHGGWMVLGLIPYLGVTAGFTHFLLQTPVFPYPQWFMP GMSYAVNTAFFVIAVLLFYYIRYGGHLSHLFKPSRNNMPTILKNDIFFSKAVVDDCIAIE LVLKQQEQRILNHSEEEAVKIMAPVVRVRETKDIWRPFLRQAEGPRIRKPKHIYFIVGES YTQVPFDDHYQALHLVEEGKKFRASAHTFSIPNFLSAGMISQPSLASLFSGIFDANFEIN EMPAFQQQQLPTAFAGQVKKLGYTTAYWYGGNTAWASLGRFGKAQGFDICKGAPEFCPPH SPTTWLGIYDHIFFEGLYKELCALPADEPMFHLIYTTSNHPPYTIPVEKYGFDPDRIMPD LTPDIRKNRKLLNNLGMYWYADYYMSEFIRKVQALDPDSFILVTGDHSRLIIPFHTQMYS EKEPSVREKYCTSFAMHHPDLQRSMFPQLHIGGHMNIMPTVLEAIAPKGFSYYSLVPSFF DCLDRVVTPFHWLTQERVGYYGDEVAEALDTYRPEIQQGTTCFSNERAAWCEFTAWIIRH PELWRHVGD >gi|290781052|gb|ADGP01000021.1| GENE 34 39649 - 40620 925 323 aa, chain + ## HITS:1 COG:CAC2988_2 KEGG:ns NR:ns ## COG: CAC2988_2 COG3584 # Protein_GI_number: 15896240 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 236 323 1 93 93 88 50.0 2e-17 MNKRCQGPVTRMYATIIALILVVSLAGFAEKGKTVVIEADGVSQTVYTHAINKDALMREQ KINVGPYDELVMSTSALKDGSTVVLRRAVPVTLVCNGVKRTVMTAKQTAWDAASQYGYSR DRYRPFGNPDRPVVKGMTITIGTFTEKTLTEDQVLPYAIESIPDESLPKGQEKIVQQGQN GSKRVTVKIVTMEGKVVSQEPVSTKLLTEMKPLIRHVGTKQVINTGSLSRYKQVISMQAT AYLPTDGNGKGLTRMGTRARRGVVAVDPRVIPLGTKVYIPGYGVAVAEDTGGAILGNRID LCMEDYNSCMSFGRRSVPVYILE >gi|290781052|gb|ADGP01000021.1| GENE 35 41409 - 42824 1779 471 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0555 NR:ns ## KEGG: Vpar_0555 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 3 450 2 404 420 182 32.0 4e-44 MKKAKILAALAATMAVGATCAFAANPFADVPADSWAYKSVVTLANSGILQGVDGTHFQGN RNITRYEAAEITAKAMAHADRANVQQRAVINKLAHEFAGELNNLGVRVANLEDQVGTVKF SGIFKAEYNYKGAQKTEIDTANYQTFLVAKKVKKTPVWKAAADIPQPNLLERTSVTRAAA AANSRDAAVKKITGDDSYSYTAQLTATAKVSDKTKAVVGFKYKGEFVKNGDADKAYAHVN VANVQTEVADRVSVLAGRYNLTLGQGYIYDDTVDGAEVQYGGKKVELSAGYAKLKADYPT YKVGYVQAKAAVCDRVAVGAYFGNVMTGEPNLRTQVYGASVQAKVSDQVKALVSYEKYKE YKTNTHETKSKPASWYGKVTYGNADFETPKSWDIWVDYLQADDFAMVNGATWRSGNLQKD VKSWGAGVEYVFAKHAKFQLQQSFASKKKSDIKVINTKLGEQTKAQVVFVF >gi|290781052|gb|ADGP01000021.1| GENE 36 43159 - 44592 1793 477 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0555 NR:ns ## KEGG: Vpar_0555 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 3 455 2 404 420 153 29.0 1e-35 MKKTKILAALAATMAVGATCAFAANPFADVPADSWAYQSVVTLANSGILQGVDGTHFQGN RNITRYEAAEITAKAMAHADRANAQQRAVINKLANEFAGELNTLGVRVANLEDQVGTVKF SGGFKGTYIHHGANTTELDINNYGKAADAPKESEKWMSAQDIYAKKDTLTDPKYAASVRR ATKIVKEKIDKKTAVQGDASYSYEAKLQATAKVSDKIQAAFGFKYTDEFKNSEQAEASHA YVNVANVQAAVTDRVSVLAGRHELTLGQGYIYDDVAEGAAVQYAGKTTDFSAGYAKLKKA KNYKLAYVQAKATVCDRAAVGAYYGHVVVPGASKEISTQVYGASLQAKVSDKVQALVSYE KYHVYDTKNKQTTDSAAVRYGKVMYGNADFATPKSWDIWVDYLNTDKFSIPVSGDWRIYN LKNNASTSWGIGVDYVFAKNAKLEIKQTLASKKKTEPVQGAKVKFAETTKAQLVFVF >gi|290781052|gb|ADGP01000021.1| GENE 37 44923 - 46401 1840 492 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0227 NR:ns ## KEGG: Vpar_0227 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 321 1 331 423 138 34.0 5e-31 MKKTKILAALAATMAVGATCAFAANPFADVPADSWAYQSVVTLANSGILQGVDGTHFQGN RNITRYEAAEITAKAMAHADRANAQQRAVINKLANEFAGELNNLGVRVANLEDQVGTVKF SGTFKVDYNHKPASTRDYDVANYKGIKDDIKNKTHNHAMQPADWLSGETVSADKEQKYSN EGTYGEVKKNAGEYIETAKKAAVTGDASYSYTAQLTATAKVSKNVKANIGFKYKGTFNDA AGADKAYAHVNVANVQAKVADRVSVLAGRHTLTLGQGYIYDNVVDGVEAQVAADKVSVQA GYAKLKAKDFTDYKVGYVQARAAVSDVAGIGAYYGHVVVPNEPKDASTQVYGAFVQANVG KQVQALASYEKFRAYDSTAKQARDNSVARYGKVTYGKADFATPKSWDVWVDYLNADSFAF SVETGGVNGGTWREGDLADNIISWGIGADYIFAKNAKVQFKQSFASKLKYEPHAAVKTKV GEQTKVQLEFVF >gi|290781052|gb|ADGP01000021.1| GENE 38 46745 - 48181 1690 478 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0227 NR:ns ## KEGG: Vpar_0227 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 300 1 316 423 139 35.0 4e-31 MKKTKILAALAATMAVGATCAFAANPFADVPADSWAYKSVVTLANSGILQGVDGTHFQGN RNITRYEAAEITAKAMAHADRANAQQRAVINKLANEFAGELNNLGVRVANLEDQVGTVKF SGTFKVDYNHKAASTRDYDVANYKDVAVDKTQNYTMKPAEWQSGATVKENKDNKYTTGDT YGTLQADAAKYIKDEAGAVTGDDSYSYTAQLKATAKVSKNVNANIGFKYKGKFNDDHEAN SAYAHVNVANVQAKVADQVSVLAGRHDLTLGQGYIYDDVVDGVEAQVAADKVSVQGGYAK LKADASYKVGYVQAQAAVCDYATVGAYFANVVTGVANTSTHVYGASVQAKVADQVKALVS YEKYKVYDTEHKVTTSKPASWYGKVTYGKADFATPKSWDVWVDYLNADKFDFVNGGTWRG GDLKSNVKSWGIGVDYTFAKNAKLQFKQSFASKVKKEDNAVVKTKLGEQTKAQLVFVF >gi|290781052|gb|ADGP01000021.1| GENE 39 48342 - 49268 1176 308 aa, chain + ## HITS:1 COG:BMEII0308 KEGG:ns NR:ns ## COG: BMEII0308 COG0523 # Protein_GI_number: 17988653 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Brucella melitensis # 2 261 14 315 372 108 27.0 1e-23 MQIPVYIISGFLGAGKTTCIRHLLAQTAGKARVMIIENDFGEVSFDAQVLQSAGVQVQEL TSGCICCTLSGDFKQSLQAALRGRDVDLILIEPSGVGKLSDIITACQSPELADTLSLRQC VTVVDVQRCALYLRNFGEFYKDQISHSQVVFLSHVDENPQAVAAAEAAVRTYNPTCRIYA EPWEKLPLGDLVFSASAGIELSGSPVQEPPCDQDRAHDHAAPFVTCTLYAKEPRSAAAWQ QVIRAGISLEGAALVRVKGILPTPSGYIQVQYNGGALTCADSMVPGRSLTCIGTSLQEKR WRALWEEV >gi|290781052|gb|ADGP01000021.1| GENE 40 49253 - 50860 1508 535 aa, chain + ## HITS:1 COG:BH1518 KEGG:ns NR:ns ## COG: BH1518 COG0701 # Protein_GI_number: 15614081 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 233 528 41 335 337 152 31.0 2e-36 MGGSMSRIIEPIPVYVVTGFLSTGKTTVLNHILSHRSGVVGRAAMEEGMTPASTPVYTLP PVTETNAAQVADSLLRQVQGKGIRELWLEANGMVPFAVLEKLFLETSLNRVFRLKKVFFV TTVPYCRQLLGKTGNAVYTQLSHADTIILLDRLPGEEAHADALAEMQVKRQLQRLCPQAR FITASSLTDARTVAHEVTVRHTRTARLITAGFIAFAAGYTIICHSQASTAATWHVVSALW LATVLQAFSFLILGIACSSALQVFVPPYFLENRLRGNLAKSMVWALVGGFIFPVCDCASI PMFRSLISRRVPIPAALLFMLSGPIINPVVIISTWYAFLGMSQVAAARIILGLAVALTVS LSFRKYCGAEALTAGMPAAAVSACSSVEVGKITTRRDRVILFLEHAKNDFYRMAPYIVGA SFLVALFQGYSGNLLKYYSLTGNLSMTIELMLALAFILSICSTADAMIARNLSSNVPLPG ILAFLIFGPMMDLKNFLILSSLFPKPFVYRLVISLVAACFAASFIFAFATGSVVI >gi|290781052|gb|ADGP01000021.1| GENE 41 50861 - 51604 832 247 aa, chain + ## HITS:1 COG:CAC1591 KEGG:ns NR:ns ## COG: CAC1591 COG3689 # Protein_GI_number: 15894869 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 132 246 118 238 245 67 35.0 2e-11 MKQVNRQALAEGVSFIVLAVVWLIFMGSGTYRLFIAPRLLPFLSLAVVFFLLWGGVTLFL GRRPTYRQRYRNCLIMLIPAVLLLGPVCFGGQRFSGHAAAEMMDEPQASTHPFGIDFDGL SGPGIDEEHRVIIMNTKNYYANDLELTKNIEKYQGYTVYALGFVSYDDEMLKGNDFTIAR YLMFCCINDITPFGLTCQYDGTKRWTEFQWVAVKGTVSKRPWHGLMQPIIVVQEIMPARK VEGYIYP >gi|290781052|gb|ADGP01000021.1| GENE 42 51673 - 51876 371 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968799|ref|ZP_06560336.1| ## NR: gi|290968799|ref|ZP_06560336.1| twin arginine-targeting protein translocase, TatA/E family [Megasphaera genomosp. type_1 str. 28L] twin arginine-targeting protein translocase, TatA/E family [Megasphaera genomosp. type_1 str. 28L] # 1 67 1 67 67 86 100.0 7e-16 MHLGAQELIIILIIVLILFGGKKVSGLGRALGTSLREFKEEVNKPTAETATVKMGDEETT AKKDGET >gi|290781052|gb|ADGP01000021.1| GENE 43 51876 - 52388 487 170 aa, chain + ## HITS:1 COG:L118481 KEGG:ns NR:ns ## COG: L118481 COG0350 # Protein_GI_number: 15672513 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Lactococcus lactis # 6 162 6 163 169 141 44.0 6e-34 MYYWTSYASPLGEMTLAATDTLLLGVWFVGQKHYFGTYKQEDFQVGANAVLQKGVRWLDD YFSGRQPGPWQVPINPAGTMFRRRVWQTLCQIPYGRTQTYAGLADLLQNATGTVVSPQAV GAAVGCNPLAIIIPCHRVIGTGGALGGYAAGTERKRRLLYSEGVDARRLK >gi|290781052|gb|ADGP01000021.1| GENE 44 52494 - 53186 364 230 aa, chain - ## HITS:1 COG:BMEI0536 KEGG:ns NR:ns ## COG: BMEI0536 COG2968 # Protein_GI_number: 17986819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 2 230 4 250 250 73 27.0 3e-13 MKITRFMFRFFCTLLIPAALYTLSPAVAAAPPATLEVTGYAETQIVPDTAYISIGMETAA PTVSIAQTRNNRDIQKIRTALQHAGIAPEDIKTTDFYVSPNYDSKNDTIISYTVTHMLRL KIHDLQRLSALLDTIAHYAPNKIQDLTFVGEHIEGTERQLLQQAVQNGRNTAEITAAAAG KRLGDIKEITIPAAPSYRGTVRSVNLTAATPVAIGTATVRRQVHLVFYLQ >gi|290781052|gb|ADGP01000021.1| GENE 45 53467 - 54768 1554 433 aa, chain + ## HITS:1 COG:CAC3014 KEGG:ns NR:ns ## COG: CAC3014 COG0422 # Protein_GI_number: 15896266 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Clostridium acetobutylicum # 1 432 1 432 436 593 67.0 1e-169 MNYTTQMDAARKGIFTPQMKIVAEKEHMDEKKLMQLIGEGKIAIPANKRHTSLSPEAIGK DCRTKINVNLGVSPEHNNHEEELEKVRNAIALKAEAIMDLSNFGKTREFRRKLVAMSTAM IGTVPMYDAVGMLDKDLKDISVDEFFSVVQQHAEDGVDFMTIHCGMNRKTAERIKRNPRL TNIVSRGGSLLFAWMEMNDRENPFYEYYDRLLDICETYDVTLSLGDACRPGCTHDATDAA QIEELITLGELTKRAWERNVQVMIEGPGHMVLNEIAANMRLQKRLCHEAPFYVLGPLVTD IAPGYDHITSAIGGAIAASCGADFLCYVTPAEHLRLPDVQDVKEGIIAARIAAHAADLAK GIPGAQAWDDAMSKARAAVDFDTMIPLSIDPEKARNYYESSKPECEGTCTMCGKMCPART MKKILNGEDVSIR >gi|290781052|gb|ADGP01000021.1| GENE 46 54852 - 55079 61 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISRYEYSTVIVYLYKPNRALANTKTSTHENVINEGVQVPEIQRQSVSDDRNCKIPQPDR PRIDTTAVIAVRLSF >gi|290781052|gb|ADGP01000021.1| GENE 47 55216 - 58890 4613 1224 aa, chain + ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 389 906 93 649 1291 108 27.0 9e-23 MNKVYQVIWSRVRHCYMAVAETVARSHYKHSSKSAAKATWAAVAAAGLLTGIPAFSMAQG STIAAPNQVVRTAEGQALTKDNGKAKKAATPVFSNKELKKLTERVTFPMNFMVTDGGTDG VYVTEQRYNNDLKGEHIVLGEGSVAFDRQKGYSGLFAAGINAVAGGKDAIAIGNQASATG NNFSIAIGSNAEAPMSNSIALGEGSIANLKLSQQGKQSYLTKEDWNGDYNGVLSLGRDLS GARAEVTRRIIHVAGGAADTDAVNVKQLKALEAKIPKAVDLSKYTTTDKLGAVIEQKLGD TYAKKADIPAAKTFKAVGDGISVTEKDNVITYTLDTSKLPQSSTGVYVTEQRYNNDLKGE HIALGEGSVAFDQQKGYSGLFAAGINAVAGGKDAIAIGNKASATGNTFSIAIGSNAEAPM SNSIALGEGSIANLTLSQQGKQSYLTKEDWNGDYNGVLSLGRDLSGARAEVTRRIIHVAG GAADTDAVNVKQLKALEATLHFSYISIKGTKKDKGTNYNNDGATGNEAIAIGQESQATGN SGIAIGVHSKVMGLENNNLIKGDYGTAIGAWASVKNNDATALGAHTHAWGERSLAIGDRS VGNGIESVAIGSQALADSFNAIAIGGNSSANLENAIAIGKKSKTEGMTSIAIGSEASTGQ KGDAQKSKERVKELKNDVRKQLNDPIIHKAENAIAIGTQAKAWQTKAVSLGAFAKAQERE SLALGDKSFANGIESVAIGHNSSAQHISAIALGDSSLSEGIQSIAIGKNAQAGNKDEAFK SKQQLKKIKSEHKDITNDDIINASFGAIAIGSGAKSLAMHAMSLGLNAKATAVNSIALGF NSEAKSVTHVTKAYGVDETWDFSNGVLSIGRDAEENKKAITRRITHIASGGDDYDAVNVK QLKAVEAKIPKAVDLSKYTPTDKLGDVIAQKLGDTYAKKTDIPAAKTFKVAGAGFSVEDK DNVVTYTLDINKLKTQLSGSSSAGTNGKSAYEVWEEYTDGNGAQPNKGKKESDFLASLKG KDGTNGTNGKSAYEVWEEHKDVNGAQPNKGKSESDFLASLKGKDGTNGITAAQLEQVSQG MQTRMAALGKHMNSVGAGNAALAALHPLEFDPDDKLEAAVGVGHYGDANAAALGMFYHPD ENTLISVGGAFGKDKNVMNAGISFRVGKGGNGMLLTKTALATAVKQQNIVIHQQEERIRQ LERENKARDAKLAEVLQALAQVKR >gi|290781052|gb|ADGP01000021.1| GENE 48 59071 - 59412 487 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121533790|ref|ZP_01665617.1| ribosomal protein L19 [Thermosinus carboxydivorans Nor1] # 1 113 1 113 116 192 83 1e-47 MNIISVLEQEQLRQDIPAFRPGDTVKVHVKVVEGNRERIQVFEGVVIGRQNGGVRETFTV RRISYGVGVERTFLVHSPRLAKIEVVRHGVVRRAKLHYLRGLTGKAARIRERR >gi|290781052|gb|ADGP01000021.1| GENE 49 59468 - 59791 329 107 aa, chain - ## HITS:1 COG:BS_yfjF KEGG:ns NR:ns ## COG: BS_yfjF COG1742 # Protein_GI_number: 16077879 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 107 2 108 109 106 57.0 1e-23 MIRSILYFILAGICEIGGGYLIWLCLKDHKSPLYFIGGAVILILYGMVPTLQPQTSFGKV YAAYGGIFIVLSLLWGWLIDGMRPDAFDIAGGIVSLIGVYIIMYAPR >gi|290781052|gb|ADGP01000021.1| GENE 50 60001 - 62463 3177 820 aa, chain + ## HITS:1 COG:CAC2846 KEGG:ns NR:ns ## COG: CAC2846 COG0653 # Protein_GI_number: 15896101 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Clostridium acetobutylicum # 5 789 3 787 839 915 59.0 0 MINKFVQRLLGNNTERELKKMWPIVRQINALEDNVSGLSDASLQAKTAEFKQRLADGETL DDLLPEAFAVVREASRRVLGMRHFDVQLLGGMVLHRGNIAEMRTGEGKTLVATLPVYLNA LTGKGVHVVTVNDYLATRDSEEMGQVYRFLGLSVGLIVHDLSYEQRRRAYNSDITYGTNN EFGFDYLRDNMVVSKEQMVQRPLHYCIVDEVDSILIDEARTPLIISGPGEKSTELYSTLA GIVARLEKDDYTMDEKQKTIAPTESGVAKVEKMLGVKNMFDQEHLELNHLVIQALRARFM MHRDKDYVVKNGEIVIVDEFTGRLMFGRRFSDGLHQSIEAKENVKVQGESKTLATITFQN YFRMYDKLGGMTGTAKTEEDEFNKIYKLDVYVIPTNKPAIRKDLPDVIYKTKNAKYRAVV REVLKRHATGQPILVGTTSISQSEILSQLLNKEHVVHNVLNAKFHEMEAEIIKNAGQRDM VTIATNMAGRGTDIKLGDGVAALGGLMIIGTERHESRRIDNQLRGRAGRQGDPGTTQFFL SLEDDLMRIFGSDNIAKFMDRLGMDEDEPITHSMITKSIEKAQKKVENHNFEIRKYVLEY DDVMNQQREVLYGQRRQVLVADSLRDTILNMVDDIILSALNKYANEKLYPEEWDFAGLLQ QMEQYFVPKGSVTVEELENLSRPEVQDKLKAIAVHLYDAREAEIGSDTMRQLEKAIMLRV VDSKWMDHLDAMDALKEGINLRAYGQKNPIVEYKFEAYEMFEEMIEAIKTTVVTFLYHIQ ITYSAPVQQAEDRLQEAQEVHEEAAVANGDAVQGAAEPNA >gi|290781052|gb|ADGP01000021.1| GENE 51 62456 - 62542 85 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPDGSVHKMRLDGSNLILYTARNTFIFM >gi|290781052|gb|ADGP01000021.1| GENE 52 62644 - 63702 1263 352 aa, chain + ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 1 339 26 364 366 367 54.0 1e-101 MARKEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLEL AMEEKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQ MLIRMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISP FDAAARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHL PTGIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSY VFHPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKTAGQDPYNG >gi|290781052|gb|ADGP01000021.1| GENE 53 63756 - 65810 2047 684 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0803 NR:ns ## KEGG: Vpar_0803 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 22 679 26 675 680 474 38.0 1e-132 MVKNKKSKYFMIIAVLVGLVCALILCVQRHEVEIHSRTIEQAADYDAVVRMARNDGYDME AMFAACRQAGITSFTLYDATLNKLAQRGDISVVTRLGSQLYYPQLGITDHTYDYYVIGKP KRENDPYFAEVLSDLQVRLGAGNAKDLSNGAYRIAGVRGVMPELGDVNLGILSADAAVIN QHGFYVVLRPVNYGDPVPAQVDHFFARAQAVKRASGIMFVGKDVLGYTPLATAEHRMLQH TAKRMQQEKLPFYMIEATTQLQYEPQDGMYELADLLQYHTVRGYAMSKDELDKIQPGEAS MRYYISDLERNVRFNLYPLYKKPLHGKNLTETNLDYIHTVSQKLQARGYTLGRASVMPPY YPDRLLLAAVAAAACCGFVLVLNLLVPLADRYNYMLSALGILFGCGGAAIAKGSLFLQVM ALGCAVAAPVAAMLIILDYWRQRPIRQKRGYRYVLRDSILGVSAAVALAFIGGLYIAGML GNIRFFMEFDVYRGVKLTFVLPLLLVAVGYLRRFPLYGRSLATPQEGKQFIRDFLHLPVR MSTLIIVAILGVFAYVFVGRSGHTAGVPVPGMEVAMRRFLENILYARPREKEFLIGHPAF FIMVGALYRRWPQLLHFFAVIAATIGVGSLVETFAHIRTPLMMSVIRGINGWIMGMIIGV ILIIAIAVLARFTAWLGKRVDQGE >gi|290781052|gb|ADGP01000021.1| GENE 54 65803 - 66936 1224 377 aa, chain + ## HITS:1 COG:alr4509 KEGG:ns NR:ns ## COG: alr4509 COG2327 # Protein_GI_number: 17232001 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 3 322 2 307 349 117 29.0 5e-26 MNKIVISGYYGFANAGDEAMLTAIINTLRQLDPQAEITVITGNCAATATRHRVRAVKRTD FFAIVRSLAACSLVISGGGSLLQDVTSSRSLYYYLSIMGLAVALGKPVMLYAQGIGPVRR RMARKAVRRLLQHVQMISVRDRESKRDLMAMGVTVPPIHVTADAVLSMPTVTATAGEEIL RRAGSDGTRRRVGISLREWRGVQQYKTAVAAAADVLQTEENVEIIFVPMQYPADVQAGEA VAALMKTPALVLREAYDTAEFMSLMACMDAVIANRLHALVFASLVHVPVTAVSYDPKIDS FMTGIGTGICGTVERVEAADVIGNVRRQLQQGGLTPAVQQRLQHVRRQSLRNTYLAARLL VGKEGVRKAWRRWCRLV >gi|290781052|gb|ADGP01000021.1| GENE 55 66965 - 67651 368 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 195 4 199 223 146 40 7e-34 MIELKNVSKTYDNGSVALDRVSLHIGKGEFVFVVGASGAGKSTLIKLLSHEEVPTDGSVL VNGIEVNSLPKSKVPYLRRKMGIVFQDFRLLPNKTAEENVAFAMEVIGASRRVIKERVRT VLDLVGLLGKADMLPKKLSGGEQQRVAIARAIVNRPLLLIADEPTGNLDPETSKGIMDTF KKINHTGTTVLMVTHDKQMVDWMNKRVIEIVDGAIIRDELRGGYSNED >gi|290781052|gb|ADGP01000021.1| GENE 56 67641 - 68519 1070 292 aa, chain + ## HITS:1 COG:BS_ftsX KEGG:ns NR:ns ## COG: BS_ftsX COG2177 # Protein_GI_number: 16080578 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Bacillus subtilis # 7 292 9 296 296 181 35.0 1e-45 MKIRYFMSEACKSFWRNSFMSIASIVTVALSFFILGIFAIMVANLDNFADNLENQVQISV YLKDGLTTEQVMGVGKRLKALPEVRQIKFTNKDQAMTELKERMKDQPGILEALEGKNPLP TSYEITFTQAGAVKKAAQIVATYPEVESSHYGQEIIEQLLNITRVIRWGGMALIVLLTVA TLFIISNTIRLTVFARRKEIGIMKYVGATNWFIRWPFLLEGLLLGFIGGVIADAALVQFY RFVTSEIHHSLAFLPLVGMNPFMYQVGIGLLLLSMIIGAVGSTISLKRYMKV >gi|290781052|gb|ADGP01000021.1| GENE 57 68523 - 69770 1503 415 aa, chain + ## HITS:1 COG:TM0409 KEGG:ns NR:ns ## COG: TM0409 COG0739 # Protein_GI_number: 15643175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Thermotoga maritima # 294 415 134 254 271 126 49.0 9e-29 MIEFKAQKKYIVACVTAALLAPCITTFAVDEDLHNRLSNVKSQMQVQAQRSQQAQAVIGD VFAKLKTIQDQLAAAETAERDITAQLAQTEKNIQTTQAKLVQEQGKLDQRETVFQRRIRE IYMHGQLNYLDVVLGAKDFNDFATRVELLRRIVVSDMQLISSIRVHRDAIHQAKSELEAE RARQLSLQAAAAKKKQEIAQHKQELQAVLYQAQHDKAVADKAYQELEASSAQIGAMLRKR AADRAAAAAVAAARKRMAEEAARRAAAARSGSKQSGSVYIPPAPVPAGTGRLGWPASGPI TSPFGYRIHPIFGRRIFHSGIDIGVGTGTPVHAADAGIVVSAGWISGYGYAVIIDHGGGI STLYAHNSSLLVHAGQSVAKGQVVARSGATGNVTGPHIHFEVRRNGTPVNPLSFL >gi|290781052|gb|ADGP01000021.1| GENE 58 69781 - 71052 1514 423 aa, chain + ## HITS:1 COG:CAC0499 KEGG:ns NR:ns ## COG: CAC0499 COG0793 # Protein_GI_number: 15893790 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Clostridium acetobutylicum # 44 414 25 394 403 204 33.0 3e-52 MKGKFRLFSLWRQVHEEKRVDVSTTAAVKKHTYISRILRFSVTFVGGFVVLTGLISYVFF ATPWAMFRLYKAMELVRTQYAGTVAQKKLFDGLLSGAVASLGDRHSTYMNAEDLAAFKQQ IGASYAGVGVVIGKNNDGAVVIQMLLDTETPSPAQQAHLRKGDCITAINGVSAAQDSLET IAEKIRGPLGSKVVLTIVRDGVSRQVTLVRQNLQIKMVKGRMIPHSEVAYIRIYGFSENS ARDFTQVYASLRKQGMKKLILDLRNNPGGLVEEAVGVATNFVPKNSTIISFTTTGGKQQR FKAAGTDRTLPIAVLINRQSASASEIIAGDIQDLHLGKVFGTRSYGKGTVQNMYELSSQQ AIKLTIAKYHTSSGREIDGTGIIPDQAVPEHSQAVVDETFDAALQWLDPTYKKSGTVTAI PLD >gi|290781052|gb|ADGP01000021.1| GENE 59 71218 - 72765 1836 515 aa, chain + ## HITS:1 COG:SA2294 KEGG:ns NR:ns ## COG: SA2294 COG1070 # Protein_GI_number: 15928085 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Staphylococcus aureus N315 # 12 515 5 510 517 379 37.0 1e-104 MNRQTLSTRVWIGVDVGTTGVRAIAYTAEGTKVCASEAFYPLLTPRPDWVEESPLQIYDA VVEVVHHTAQELRYKNKIICGLVLSTAMHSFAGLNAAKEPLMDMQTWADSRSASVVREMK RDASSVRAFYERTGCPVHACYPLAKVIWLRRNQPEVFKQMCYVGSLKDYIFYQMTGEWAV DKSTASTSGLYNAHTLQWDEEILRYAGLTEAHMPPVVATTYRSRLHEKAAVALGLPSGTP VVIGATDGVLVNVGIGAVQPGQLSGTIGTSGALRMLTAQPRVDAQMRTWCYNLVDDMWVA GGAINNGGMILRWLRDKICHYGGSALESLDIDPYDLMTMKAEHVGPGAGGLICLPCFTGE RAPYWNSELRGMFFGLSLNHSRSHMIRAVMEGICYSLNSIMAALREFGPIRDIRVSGSFT KSNVWLQMLADILNEPITLPDNSEGAAFGAAVLGFISDGTLQSIADTAHLVHPKRVYRPQ ADTVPTYKELYQIFEHLYAHLQEEFAVITAYQNKH >gi|290781052|gb|ADGP01000021.1| GENE 60 72788 - 74197 1538 469 aa, chain + ## HITS:1 COG:lin1413 KEGG:ns NR:ns ## COG: lin1413 COG0362 # Protein_GI_number: 16800481 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Listeria innocua # 1 463 1 467 472 463 49.0 1e-130 MGVQNIGIIGMGVMGSNLALNIADHAYTVSVYNHTPRSTENFVRDHAHANIIPYYDLQQF IASLEKPRKIMLMIVAGEPVDQMIARILPLTDAGDIIIDGGNSFFKDTQRRTQVCREKGV FFVGMGISGGETGARRGPAVMVGGESTAYEKIRHIYEAVAAKADDDKPCCAHVGPDGAGH FVKMVHNGIEYADMQLIAEAYLLLKEMGGYTHAELADIFHDWNTGELHSYLIGITADVLA ETEDGGSVLSMIADRAEQKGTGRWTGIEALAEGVDVSLIIAACNARVLSQVAGRRRAQIV FPRPERGQVKAADFVEAVRKSLYTAKIVAYAQGFALYQKASQTYGWQLDYRRIAEIFRAG CIIQAKFLDTISTAYAEDAQVENLLFHPFFTGKIKEGEHSLRQVAALGLAAGIPVPAMAG ALTYLDAYAGPCVGANLIQGLRDYFGAHTFRRTDKEGNFHHVWREHYKR >gi|290781052|gb|ADGP01000021.1| GENE 61 74224 - 75096 836 290 aa, chain + ## HITS:1 COG:BH2675 KEGG:ns NR:ns ## COG: BH2675 COG1737 # Protein_GI_number: 15615238 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 284 4 287 287 172 33.0 7e-43 MTWEGMQKFPFLRSVYGELTKSERRIADYIAAHAETVMEQTIADIAGQTDSSEITVSRFC KKVGCTGLQEVKLQVAAGLSTAAHDTYHDIHGDDSTYTVMWKIFKNLTEGLQDTAGLIVP AAVDRAVSILSAAGRVEVYGFGNSATVCRDIATRYMRLGLWIQAYSDAHMQVTAAALLQP GDAVIAVSHSGASAELLHSVQTAKKNGAAVIAITGHSRSPLAALADVCLCGMGREVKYSS EAGASRLIHMALGDLLYTRLAMTRSEIFQKNMKKMRREIRKKRIHSDEKD >gi|290781052|gb|ADGP01000021.1| GENE 62 75194 - 75820 725 208 aa, chain + ## HITS:1 COG:lin2708 KEGG:ns NR:ns ## COG: lin2708 COG1994 # Protein_GI_number: 16801769 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Listeria innocua # 16 197 19 201 217 122 39.0 7e-28 MFHWDFITLVAGIPGLLLAMAVHEYAHALVAVKMGDRTPQLAGRLTLNPFSHLDPIGTIL LLTVQFGWAKPVPIQSGNFRHWRQGEISVALAGPAANLFTAFLFLVAEIFFITYDLFTTT QVHRVLQMIVLYNINFAVFNLIPLPPLDGSRVVTAILPLRWQYRLAAWERYSFIILIIFL ATPVVTYVLLPLQQLVLTAYMFILSPLL >gi|290781052|gb|ADGP01000021.1| GENE 63 75832 - 76371 665 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968818|ref|ZP_06560355.1| ## NR: gi|290968818|ref|ZP_06560355.1| hypothetical protein HMPREF0889_1059 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1059 [Megasphaera genomosp. type_1 str. 28L] # 1 179 1 179 179 339 100.0 4e-92 MKWQTFICAVAAAVCTVGSAGAFDYKVSIDEVAEHPLTAYETLYLGMPQKDFSLNFSVLP DWVMQRLSAQESRAERRITRNGVTIVEGVRVQAADGSTQGRVLAFENYFKTNDKKTAKTT YTRLVSTLYANMDGYPVKQTDSTVTWVAGEVTVTISRTKDESGLYTVILRRYNNKELKQ >gi|290781052|gb|ADGP01000021.1| GENE 64 76466 - 77317 1100 283 aa, chain + ## HITS:1 COG:MA4542 KEGG:ns NR:ns ## COG: MA4542 COG0501 # Protein_GI_number: 20093326 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Methanosarcina acetivorans str.C2A # 2 277 3 284 286 268 50.0 9e-72 MNSVKTAALMTLLACIMMAIGSVFGGRQGMYLMLLIAIGMNFFSYWFSDSVVLKMYRAQE VDENHRLYRLVAELAERAELPMPRVYIIPTEVPNAFATGRSPSHAAVAATAGIMDMLDEE EMRGVLAHEMSHVLHRDILISTVVACFAGVITMLANIAQWAAIFGRGDEDDGGNPLALLA TIIIAPLAAALIQMAISRTREYMADDEGGRLCDDPLALARALAKIDNYAHYRVMPGASKA TAHLCIINPFAGIRGGLMSLFSTHPPTEKRIARLEALDRELHG >gi|290781052|gb|ADGP01000021.1| GENE 65 77484 - 79220 1591 578 aa, chain + ## HITS:1 COG:BH0640 KEGG:ns NR:ns ## COG: BH0640 COG1001 # Protein_GI_number: 15613203 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Bacillus halodurans # 5 573 3 575 585 459 41.0 1e-129 MSYVEKLQKRISVGRGEIPGDWVLKNCRFVNVYTQTICRGDIVGADGYIAGIGGPYEGKK EWDAGAYIAAPGLIDSHIHVESSYTSPEEFARMVVPYGTTAVVADPHEIVNVCGLAGLQY MQQASRLTPLHIAWMLPSCVPATPFDHSGAGLTAADMERPLRQHNVSGLGEFMNFPGVLA GNKDVLQKLAQAFDSGKPVDGHSPGLQGADLQAYIGAGIQTDHECHTAAEAQERVAAGMY VLLRYGSACHDLPRLIQAVTPATLRRFLLCSDDLHPRTIRERGHLNESLRLCVAAGLSPE AALTMATLNAAECYGFHDRGALAPGKRADIVLFDDLANFHVAKTLIGGEEAAVNGACLWP VIRQPYTEVSSSVQVGDLSPERFALQVKSSLVHTIDIQPGSVVTRKGRATIQRDGQGDFI YNPQEDIVKVAVVERHRGTGHMGLGLLRGYGLKKGAVAVSIAHDSHNIIVAGTNNTDMDT AVRALIKSRGGMTAVCDGQVVCTIPLPIAGLMSDHSGDWVAARMEEFYAVGREWGIPDTV DMVMTLCFMSLPVIPEIKLMDTGLFDVEKFRFLSLEAE >gi|290781052|gb|ADGP01000021.1| GENE 66 79239 - 80357 1318 372 aa, chain + ## HITS:1 COG:CAC1574 KEGG:ns NR:ns ## COG: CAC1574 COG1454 # Protein_GI_number: 15894852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 3 372 1 371 371 324 45.0 2e-88 MDMEEFMVKPKIKMYETCREFVAACRVTADDVMITNRYIYEPYFADLHLPCRVVYQEEFG LGEPSDEMAEALFASIPGNPQRVIAVGGGTIIDLSKLYALKTSRPVLDVFDGKIVPEKGK KLIVVPTTCGTGSEVTNVSVLALLQRHTKKGLAVDALYADEAVLIPELLKTLPYKVFATS SIDALVHAVESALSPDANEITRMFSYKAIEKIIRAYRAVAAEGADTRFRYTKDFLTASNY AGIAFGNAGCAAVHAMSYPFGGAYHVVHGESNYVIFTGVLKYYFQKRQDGEIAVLNAFLA ELLSCHTAQVYEELDALLARILPQKALHEYGVTEADLQTFTQSVMENQGRLMAHNFVTLQ AEDVYRIYKNLF >gi|290781052|gb|ADGP01000021.1| GENE 67 80723 - 82699 2248 658 aa, chain + ## HITS:1 COG:BS_yrvE_1 KEGG:ns NR:ns ## COG: BS_yrvE_1 COG0608 # Protein_GI_number: 16079816 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Bacillus subtilis # 4 558 7 559 560 432 39.0 1e-120 MTKRWQLQAGAPTAEAQLTKELHISPVLSKMLVNRGITTVEEGRHFLRDTIADSADPYRM KGLEAAVLRLDKAIDEQERIVIYGDYDVDGITATAIMCAVLRDLGAAPEFYIPERQSEGY GLHQEALEYLQQIGTQVLVTVDCGIASHDLVARFNTAMDIIITDHHEPPSKVPPAYAVLD AKQVDCSYPYKELAGAGVAYLLCRALWQKRRHTPLENYAEIAALGTIADLVPLTGENRAL VRAGLQRMRQGANMGLQALFQEARIEAEKITAGRIAYTIAPRLNAAGRISHAKQGVQLLL SHDREETRTIAARLTALNQERQRLEQDIAQLAATQISAQGREKDGVLIAYGEDWHPGVIG IAASRLVEKFYRPALVISIQNGIGKGSCRSIPGFNMYQALQFAEDLLLQYGGHTMAAGFS VRVENIEALRRRLCEYAAQQLCPDDYIPRLAIDMQLDIQDISLELIQELSCLEPYGMGNS RPIFSLSRAVLQHIQPIGAGNRHLRLVIDTPQRELTAIGWSMSEAARSLLDGDQVGLAFQ LERNEFRGQVMPQLVVQDIHAPEVSVHLNRATMVDVYTAVRVILQRCKISVYAVQQRLLR QLENRYDGHVLYAALQVLTEIGVLRTENTAGGLVYYLPVMKEKMQLENSPTYCKYTSA >gi|290781052|gb|ADGP01000021.1| GENE 68 82713 - 84914 2750 733 aa, chain + ## HITS:1 COG:BS_relA KEGG:ns NR:ns ## COG: BS_relA COG0317 # Protein_GI_number: 16079814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Bacillus subtilis # 12 727 10 731 734 754 50.0 0 MEGQQEIEEKFQQLVATIHSYQPDAPDSDLQKAFLLAADAHKDQRRVSGEWYIVHPLAVA QILADMKIDATTITASLLHDVVEDTAYMLDDIENLFGKEVAFLVDGVTKLNRLDYRTKED QQINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHRL GIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIEVLRKALTASHIQFEI NGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQDCYGVLGIVHSLWKPLPYRFKD YIAMPKPNNYQSLHTTVIGTRGQPVEIQIRTWEMHRVAEYGVAAHWRYKEGRANAGANEF DEKMGWLRNLLEWQDTTNPREFMNALKLDAFSDEVFVFTPRGDVIDLPQGSIPIDFAYRI HTDVGHRCVGAKINGKIVPLDYPLKNGDIVEIITSKVGKPSMDWLKIVGSSESRTKIRNW FKRENREENLEKGLEALEKECKRLGYEWKEIHTDGRLARVARQLNAGTEDDLVAAVGYGG FAVNTILIKLIKMHKKEVTGKDKPEPAVPMAPVKSHKTEKQYGSGILVKGEAGLLIRLAK CCSPVPGDPIIGFITKGRGVSVHRADCPNIGQAKGNVERLIDVDWEYTGQEMFEVNMEII AYDRTGIMAEIMAVLAEMKISVLSMNAKVSDTKTATIHMGIHIKDLAQFEFVATKIRRLK DVYSVARYTGGGI >gi|290781052|gb|ADGP01000021.1| GENE 69 84911 - 85360 590 149 aa, chain + ## HITS:1 COG:TM0730 KEGG:ns NR:ns ## COG: TM0730 COG1490 # Protein_GI_number: 15643493 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Thermotoga maritima # 1 149 1 149 149 162 55.0 2e-40 MRAVVQRTATASVTSEGVQTGSIGKGLTVLLGIAPDDGEKDLQYIVDKLIHMRIFEDAAG KMNCSVQDVGGSLLVVSQFTLYGDLRHGRRPGFTAAASPEMADRWYNNVVEALRATGIPV ETGRFQTHMVVSLENDGPVTILLDSKKGF >gi|290781052|gb|ADGP01000021.1| GENE 70 85391 - 86032 748 213 aa, chain + ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 3 207 1 199 199 169 43.0 3e-42 MSMKYDVTVLGPVMTNCYIVYDTETMEAMVIDPSWSCETIAANLQRLGVTLKRIVLTHGH ADHIGALQDLRQQYQVPVYVGAGDKDLITNSRNNMSLFVGKEIVCDSPDYIAEDGDIIAV GKLQFKVITTPGHTPGGICLYGSRTLFSGDTLFRYSVGRTDLYGGAWETLLQSINDKLMV LPDSTLVLPGHGPATTIGEERTGNPYLDGDGGW >gi|290781052|gb|ADGP01000021.1| GENE 71 86036 - 87115 1298 359 aa, chain + ## HITS:1 COG:SA1192 KEGG:ns NR:ns ## COG: SA1192 COG0628 # Protein_GI_number: 15926939 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Staphylococcus aureus N315 # 2 357 24 386 402 135 26.0 1e-31 MIWGKDTQFWLRTALVILAVLLFISIHAVYWPLVVSLIFTFILIPIRDGLRYLVYGICKC RLPENLAIGFSFVILILILACVANVILRPLLYQLNLLAANFNTIVLQMSVLVNHLENDQT HVYIPEQVKQLINEALVKAGNYGVDSITNVVKSVVVIAGTVVEFCVVPFITFYFMKDGAH LVQSFISIFPPTYRPRLEGIAGEIHRVLSRYIRGQIILSCIIAGVIFCGMWIMGVPYPMV IGLLAAITEWIPIVGPIVGAVPAILLGATVSGSLALKVLIFYVIVQQMDSHVIMPQVMGA VIRLHPVVIIISLLIGGTLMGVAGMILTVPITAVLQILCSHLWFYELYKDKEMDVHGKR >gi|290781052|gb|ADGP01000021.1| GENE 72 87102 - 87617 756 171 aa, chain + ## HITS:1 COG:CAC1682 KEGG:ns NR:ns ## COG: CAC1682 COG0735 # Protein_GI_number: 15894959 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 6 155 2 150 151 135 46.0 3e-32 MERDKAELMEVMMKRMKEKIKDKRYKMTTQRQVILRAFVESTIRHMSAEEVFELVKKTSP DIGLATIYRTLDLFTEMDLLKKLDFDDGCSRYELNDRENEGHFHHHLICLGCGKVWECKD DLLETLESILQKRLHFRTVDHQLKVYGYCEECETKRQAEEAKKSVHQAGNE >gi|290781052|gb|ADGP01000021.1| GENE 73 87610 - 89061 1286 483 aa, chain + ## HITS:1 COG:BH1152 KEGG:ns NR:ns ## COG: BH1152 COG0635 # Protein_GI_number: 15613715 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus halodurans # 87 470 97 485 498 245 34.0 2e-64 MSNIYTYRYSGPAAYHSLVGQIMASLGFVGGHRPAPTGAAVLLREENRRFFLQCTYGNGH TAQHFSATVKGTDIPRQVKRELLHWYDQWQGKTRGPWGILTGVRPTKLVHRLWDQGHSEE TIENILQEEYEVAKETARFLVNMARLQRPYVAVQPKRAALYIGIPYCSGHCLYCSFPSRQ VTHEPVSRLSRFAEALVKDVEDWAALCAQYDLQVQSIYIGGGTPTCLSVQFLQPLLQVVQ QHFSSAGEWTVEAGRPDTATLEKLTLLRRCGVNRISVNPQTMQQSLLDRLGRNHRVEDIY DMYEHCRQLGFPVINMDFIAGLPQQTVVDMEENMKIVCQLQAENVTIHTLALKKSAPLFQ HPLRQYIPEAATVEKMLAICRQYLRHNGYIPYYMYRQKYMATNFANIGYARPGTISTYNI EMMEERQTVLAAGPGGATKFLTGPYSLAKLYEPKDIDAYIQALPDKIQERHRMCARIYGG EDT >gi|290781052|gb|ADGP01000021.1| GENE 74 89061 - 90329 1496 422 aa, chain + ## HITS:1 COG:BH1251 KEGG:ns NR:ns ## COG: BH1251 COG0124 # Protein_GI_number: 15613814 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Bacillus halodurans # 1 416 1 419 428 440 51.0 1e-123 MAITAPRGTQDFLPEQTAEWQMLEAKIRRICALYEFGEIRTPLFENTELFLRGIGETTDV VTKEMYTFVDRGGRSMTLRPENTASVVRSFLEHKLYGEQKVHKFYYMGPMFRHDRPQAGR YRQFNQFGVEAIGSKDPAVDAEIISLAFQLFRELGLNDLVLHLNSVGCPSCRPIYRQKLL DFFADKKESLCDDCRERLEKNPLRVLDCKADGEKMMNMGVPLITEHLCESCQSHFQQVQQ YLQAVGIPFVKDPRLVRGLDYYTNTAFEIMYAPLGAQSTVCGGGRYDGLIAEVGGPSTPG IGFAVGMERLLLTLKEQGLLTVPVGVPPIFIVALGEAARAKAFVLQQALRARQIAAEIDL MGRSMKGQMKAANKAGAWYTVIIGEEELARQEVQVRNMMTKEQIAVPMNELVTYMESNRR DD >gi|290781052|gb|ADGP01000021.1| GENE 75 90333 - 92126 2074 597 aa, chain + ## HITS:1 COG:BS_aspS KEGG:ns NR:ns ## COG: BS_aspS COG0173 # Protein_GI_number: 16079809 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Bacillus subtilis # 9 594 4 590 592 699 59.0 0 MDTMAGLHRTQYCAEVGEADQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIVQVVAAPDY ETASFQKAEQVRTEYVLVVRGTVRMRDAETVNPKMKTGTIEVRCNELRILNSSKTPPFYI EDNIDVDEKIRLKYRYLDLRRPEMQHNLIMRHHVKHAMRSFLNTHGFIDIETPELCKSTP EGARDYLVPSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQPEFT QLDMEMSFMDQEDILSLTEEMMQYIFKETLGYELPLPIQRMTWDYAMENYGSDKPDLRFD MKFTDVTELVKDTDFKVFRSVIDNGGRVKAINVKGDADIPRRELDGLVEYVSHYGAKGLA WIGFTADGNLKSQIKKFFGEEKLREIGAACGAETGDLILMIADKPAVVAAALGELRKEMA RRMHLIDENQFAFTWVVDFPMFEYSEEEKRYVAMHHPFTAMREEDLDKLETDPGHVYAKA YDLVLNGIELGGGSLRIYQPDIQQRVFKAIGLTPEEAEQKFGFLMRAFEYGAPPHGGLAF GLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSVVTRKQLHELHIQTEEELVSK >gi|290781052|gb|ADGP01000021.1| GENE 76 92230 - 92790 635 186 aa, chain + ## HITS:1 COG:alr2975 KEGG:ns NR:ns ## COG: alr2975 COG0681 # Protein_GI_number: 17230467 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Nostoc sp. PCC 7120 # 15 186 28 179 190 108 37.0 8e-24 MRTFLHEVYEWGYSIIIALAIALVIHIFFIQPTRVSGESMVPTLHNGEYLVVAKWPHVLR QVPQYGQIVIIDSRVAYARSWKDDAAEPMHNYFAFFNADLQTHNVWVKRVIGRPGDTLAF HDGKVWRNGKALTEPYINEPMEYSSTKEIKIPDGYVFCMGDNRNHSSDCRFIGPVPLDHV LGRVIW >gi|290781052|gb|ADGP01000021.1| GENE 77 92926 - 93456 426 176 aa, chain + ## HITS:1 COG:BS_ykvM KEGG:ns NR:ns ## COG: BS_ykvM COG0780 # Protein_GI_number: 16078439 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Bacillus subtilis # 14 176 3 165 165 255 72.0 2e-68 MTATEACWEGMTVSRTKDELQQIQHLGNQHTTYTGTYDPSVLESFANKHGDHDYFVKFNC PEFTSLCPKTGQPDYATIYISYVPDLRLVESKSLKLYLFSFRNHGDFHEDCINIIMKDLC ALLDPKYIEVWGKFLPRGGISIDPYCNYGKPHTPWENVAWQRLAQHDLYPETVNNR >gi|290781052|gb|ADGP01000021.1| GENE 78 93520 - 93891 538 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968834|ref|ZP_06560371.1| ## NR: gi|290968834|ref|ZP_06560371.1| hypothetical protein HMPREF0889_1075 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1075 [Megasphaera genomosp. type_1 str. 28L] # 1 123 1 123 123 207 100.0 1e-52 MHVKKIATALFFSVLMTAAVGASGTYWQYDANTQIDMKSAKVSYKSGEKILTFRTVETAE DSISYCTYVYNAAEQTIQLQRMVTKTPTHQYESTFYPESVRTGNATIKARAHMAEMLMQH LGH >gi|290781052|gb|ADGP01000021.1| GENE 79 93960 - 94604 709 214 aa, chain + ## HITS:1 COG:CAC0689 KEGG:ns NR:ns ## COG: CAC0689 COG0177 # Protein_GI_number: 15893977 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Clostridium acetobutylicum # 9 206 8 205 211 214 53.0 8e-56 MITKAVKQQILQRFQDRYGILKPALHYTTPFELLVAVVLSAQCTDERVNSVTAGLFPKYG TPERMLTLGLTGLEEKIHTCGLYHNKAKNILATCAVLCEKYQGCVPRTFEELVTLPGVGR KTANVLISILFQTPAIAVDTHVFRVSNRLQLAVGTTPLAVEKGLQKVIPEPWWSRAHHWL IWHGRKVCKARKPLCDQCFLADLCPFAGATHTKA >gi|290781052|gb|ADGP01000021.1| GENE 80 94728 - 95123 527 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968836|ref|ZP_06560373.1| ## NR: gi|290968836|ref|ZP_06560373.1| hypothetical protein HMPREF0889_1077 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1077 [Megasphaera genomosp. type_1 str. 28L] # 1 131 1 131 131 264 100.0 2e-69 MHLQYVKGSYLDEIEWNDRPVLFILEGLAAGQEREARQYIRDIWQWILAHRQQVLAYAPA LVEMKNTKWLSAGEPKVSLQEVEHCLQHITSVHATYAHGFDIFFNTCMLFGERALVVHMG KNYVFEGMRLA >gi|290781052|gb|ADGP01000021.1| GENE 81 95204 - 95590 565 128 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 4 125 14 135 137 126 48.0 1e-29 MAVQVINTNKAPGAVGPYSQAVKAGDFLFASGQIAINPEKGKIVASTVAGQAEQCMKNVE AILSAAGLSFDHVVKTTVYITNIDFFGTVNEIYGKYFKNTLPARSCVEICSLPKGALVEV EVTAYCGK >gi|290781052|gb|ADGP01000021.1| GENE 82 95697 - 97292 1671 531 aa, chain - ## HITS:1 COG:CAC0630 KEGG:ns NR:ns ## COG: CAC0630 COG4108 # Protein_GI_number: 15893918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Clostridium acetobutylicum # 3 518 4 516 526 649 59.0 0 MSFIDAITHRRTFAIISHPDAGKTTLTEKLLLYGGAIHLAGSVKARKTAKHAVSDWMEIE KQRGISVTSSVLQFDYEGHHINILDTPGHQDFSEDTYRTLMAADSAVMLIDVAKGVEAQT KKLFKVCKERHIPIFTFINKIDHFGRNPFDLMDEIESVLGIHAYPMNWPIGLNGNYQGIY DRRSASIELFAKDTSHGQQKLSSTKGSAADPRFKELLDDDVHKNLIDDIELLDMAGDAFS SEQVANGELTPLFFGSAMTNFGVKPFLESFLQMAPPPQPRHAKEGIVEPADEEFSAFVFK IQANMNPQHHDRMVFMRICSGKFTKGMSVTHCQSGKTVRLMQPQQFLATERTGVETAYAG DIIGIFDSGTMGVGDTLYTGKKKITFKDFPTFPPELFARIRAKDSLKRKQFLKGMTQLAQ EGAVQIYENMGSLESYIVGAVGPLQFEVLSYRLQHEYGVTLEMNRLPYTVARWLALPDTM AYSDLKNIDSAMAVKDHKQRLVLLITNDWQTNWIAERNPEVLFCSTPDELP >gi|290781052|gb|ADGP01000021.1| GENE 83 97509 - 97967 440 152 aa, chain + ## HITS:1 COG:SMc00785 KEGG:ns NR:ns ## COG: SMc00785 COG1959 # Protein_GI_number: 15964483 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Sinorhizobium meliloti # 11 139 3 131 154 64 28.0 8e-11 MFYRGVVWLIITRETDYAIRILRALEGKDVSSIREISDTEYIPLQFAYKIAKKLDHAGCI EIIRGPHGGCRLVKDLHAVTLFEIIQITDRENMVTSCMNEDFYCMYREVNEECIMHTSLC QVQSHITKYLKTLTIHDLIFLKKGRKRKKITV >gi|290781052|gb|ADGP01000021.1| GENE 84 98339 - 99526 1287 395 aa, chain + ## HITS:1 COG:Ta1193 KEGG:ns NR:ns ## COG: Ta1193 COG1167 # Protein_GI_number: 16082202 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Thermoplasma acidophilum # 3 394 4 399 402 346 42.0 4e-95 MTRLSGFAQTLKASDIAALLKLTEKPEVISFAGGLPAPELFPIEEMKSVDTAIYETEGSK AVQYGLTEGYGEFRKQLQKRMKDKFFVDCSTEDIVVTTGSQQALFILSQLLLDEGQTVLM ESPSYMGAIMAFNPRWPKYTEVPTDEAGMIPEELDKILAADDSIRVIYVIPEFQNPTGIT WSLERRKAFIEVINKYDVTVLEDNPYGEIRYDIERIPSLKSLDTQGKVVYMGSFSKIFLP GLRLGWIVANPQIIDKFVKFKQAVDLGTSTFGQRQAAYYCNMYDMEAHIRKITDLYRKRR DIMCASMAKYFPDSVTFTYPKGGLFTWVTLPEHVDATALMPKCLARNVAYVPGGIFYPNG GRRNHFRLNYSNMPEERIVEGVKRLGEVLHAALDA >gi|290781052|gb|ADGP01000021.1| GENE 85 99600 - 101414 1520 604 aa, chain + ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 6 604 8 597 714 558 44.0 1e-159 MQAVEVLQKYFGYPSFRPGQEAVIETILSGRDCLAIMPTGAGKSLCFQIPALLLQGLTLV ISPLISLMKDQVDALTAQHIPAVYINSQCTLADLKYRLGAIRSGRVRLVYVSPERLQNEF FTNFMQTLPVAQVVVDEAHCVSQWGHDFRPGYGMIKAWVDKLPERPIISAFTATATEKVK TDMLALLGLDKPRIFIGSFDRPNLYFRVVKSQDKLRFVISYLQNHPRESGIIYVATRKEA ERVYAEVKSRGYAAGRYHAGLEDEERKRMQEDFSYDRISVMVATNAFGMGIDKSNVRFVI HYQIPGNLESYYQEAGRAGRDGAPSECILLFHRQDVMIQRYLIEQGRYTPEKEKKELYNL QRMVQYGESHGCLRHAILDYFGENVSWQRCERCGNCQEETVEEDRTPELRNICLCIDELK GRFGSTMVCLILAGNATRKVLQYGFEHNAAFGLLADIRAEELRDMVQQAIENGYIRQAAG RYPTLSLTAAGRKLLQGQSRAVPIRRGTGKVNSAHDSQTIVYKADQQLFEQLCQCRHELS QKFHIPPFVIFSDATLWEMAHERPVTVATLGTIKGVGTFKLNKYGKYFIRVIQTYINKGS DSSE >gi|290781052|gb|ADGP01000021.1| GENE 86 101407 - 102198 837 263 aa, chain + ## HITS:1 COG:CAC3003 KEGG:ns NR:ns ## COG: CAC3003 COG0207 # Protein_GI_number: 15896255 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Clostridium acetobutylicum # 1 263 1 263 263 395 71.0 1e-110 MSKADTQYLTIVENILKNGYYADNRTGIPTYKLPHQVMQFDLAEEFPILTTKFVAFKTAV KELLWIWQLQSNNVHDLQAMNCHVWDEWMRPDGTIGKAYGYQIRKYKQTDTLLHTLKTDP QNRRMIVSLWNIEDLPDMALEPCAYQTLWDVNDGRLNCLLIQRSGDMGLGVPFNMTQYAV LVHLIAQVTGLTPGLFTHVINNAHIYENHVAALQTQLARKELAPAAPTLEINKNIKDFYA FTPEDIQLIHYKHLGKLPMEVAV >gi|290781052|gb|ADGP01000021.1| GENE 87 102198 - 102695 600 165 aa, chain + ## HITS:1 COG:CAC3004 KEGG:ns NR:ns ## COG: CAC3004 COG0262 # Protein_GI_number: 15896256 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Clostridium acetobutylicum # 1 162 1 153 153 124 40.0 5e-29 MVQIIAAVTQNGGIGKNNRLLCHLPDDLKRFKELTFGHTIIMGRHTFESLPGLLPGRHHV VLTGNLVYEKKFPAITVCASLGELKKYIQSHADCFIIGGAMVYKECMELAQVLWITEIDA LPEADAFFPPIVPDTWKETQRFHHDADKKHKYAFDFVRYERKARK >gi|290781052|gb|ADGP01000021.1| GENE 88 102831 - 103028 371 65 aa, chain + ## HITS:1 COG:BH3610 KEGG:ns NR:ns ## COG: BH3610 COG1278 # Protein_GI_number: 15616172 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Bacillus halodurans # 1 64 1 64 65 90 76.0 5e-19 MHGKVKWFSAEKGYGFIEKDGGGDVFVHFSAIQEDGFKSLAEGQEVEFDVQEGARGPQAA NVVKA >gi|290781052|gb|ADGP01000021.1| GENE 89 103197 - 103415 260 72 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01434 NR:ns ## KEGG: EUBELI_01434 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 72 1 72 72 82 66.0 5e-15 MKKTYKVDVDCANCANKMEYAVKNTAGVKDAVLNFMTLKLKVEFEDGMNPQEVMSLAIAN CKKATSDGEILM >gi|290781052|gb|ADGP01000021.1| GENE 90 103498 - 105405 2477 635 aa, chain + ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 28 626 112 700 702 607 53.0 1e-173 MNKKRKIRVLRIIVTAVLLVLLSQVAANGWIRLLLYGIPYVIIGGDIVCKAWKGIRNGQV FDENFLLSVATIGAFILAVYKVGDYTEAVAVMLFYQIGDLFQNYAVGKSRKNISELMDIR PDYANIEDADGHTVKVDPDEVAPGSIIIVRPGEKIPIDGVVEEGTSTLNTGALTGESVPR LAEKGIEVISGCINLTGVLKIRTTKEFEESTASKILDLVENAGSRKSKSEAFISKFARVY TPAVCYGALALAVIPPLVRWGILGMTPLWEEWIYRALTFLVISCPCALVISIPLSFFAGI GGAGRGGILIKGSNYLETLAKTEVAVFDKTGTLTAGTFEVKALHHTTLEEEKILEFAALA ECASSHPISRSLQKAYGKVIDAKRVKDIKELSGNGVQAVVDGIPVAVGNEKLMQSLGIKA IACSSIGTIIHVAIRHAYAGHIVISDTIKVESKMAIDALKQAGVKKTVMLTGDIRPVAEE TARVLALDEVYSELLPEDKVRKVEDLLQHINGKGKLAFVGDGINDAPVLSRADIGIAMGA MGSDAAIEAADVVLMDDDPRKVASAINIAKKCLRIVYQNIYFAIGIKLLCLLLGALGIAN MWLAIFADVGVMIIAILNATRALFVKQYLYIDWEN >gi|290781052|gb|ADGP01000021.1| GENE 91 105558 - 106943 1589 461 aa, chain + ## HITS:1 COG:MA1480 KEGG:ns NR:ns ## COG: MA1480 COG0569 # Protein_GI_number: 20090339 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Methanosarcina acetivorans str.C2A # 14 458 1 448 448 261 35.0 3e-69 MSIGDRSFFEVIIVRIVIIGAGKLGYSIAELLSNEQFDVVVVDHDEERLEVVKNNLDVLT IAANGASPITMNDPDIRGADMLVAATAIDEVNMVACILAKKHGVKYTAARIRDMQFLSEA RDYLKENFDIDRLLNPELITAKEINRILMTPAALNVEDFANGKVRMLETKMSAQSSLIHI PFKDLEIPKDILVAMIFRSHQMLIPHGEDRLLPEDNAYFVGNPKAIEKFSKAFMQKKAKR MERVMIIGAGRTGRFLAPMLDQQDVYVKILDKDKERSLLVAEKLSRSMAICGDGTDIELL EQEGIAEADAVICVTDDDRLNLMLALIAKHLGAKKTIVRVSRTEYSDLMEKVGVDVVLST RLLSASEVLALARQGGVISVSLLEGAKAEAVEVLVRAGAPVVNRRLMDISLPRECLVCAY VREGQTYIPNGNSVLQEGDRAIIVTETAHSKKVMAYFKGRD >gi|290781052|gb|ADGP01000021.1| GENE 92 106945 - 107835 727 296 aa, chain + ## HITS:1 COG:AF0839 KEGG:ns NR:ns ## COG: AF0839 COG0168 # Protein_GI_number: 11498445 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Archaeoglobus fulgidus # 1 245 1 247 478 93 31.0 5e-19 MNGRMFSFLLGRMLWVDGGVFGITWLAAQGFRQAHAVYLCIPALVALGSAGILQYVSRRH RRSIHVRESAFYMAFLWLIMSILGAVPFYLTGAYSISDAFFESVSACTTTGLSLYPDLWQ QMPCLFTWQCMLKWLGGLHFIILLVTVVPQVSGCFGLFLSARQGMSFSPVIHQMEERARR LAFVYAFFSLVLVWLYSQAGLSWQQALYQSLLTVSTGGGDTGADFRYYHRFSVEIVGIAG MLAGAEIFCFTVKADFSIALKRYIWMWKVGFLSVFWRFFHYLLLPICVVIKAIPCD >gi|290781052|gb|ADGP01000021.1| GENE 93 107736 - 108392 495 218 aa, chain + ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 4 211 271 478 483 91 29.0 1e-18 MDVESRVFVGILAILSLLITADLCCHQGYTLRLALRYSFFQVVSFLSTAGFFVTNIQQWP DFSKFILFLSSLVGGCIGSVAGGLRIMRGIILFKLAAQEMKRTLHPQMVTCLKVNSVPVD RKIVSRITGYFFLFIGVFFISAVVIAGSGVQPLTAMGLAAGALSGSGTTAHLFGNITIRA LPAWTKVYCALVMIVGKMEIFSFLIILQSGIGYIRRRW >gi|290781052|gb|ADGP01000021.1| GENE 94 108401 - 109855 1209 484 aa, chain + ## HITS:1 COG:MA1481 KEGG:ns NR:ns ## COG: MA1481 COG0168 # Protein_GI_number: 20090340 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Methanosarcina acetivorans str.C2A # 1 479 1 475 476 281 37.0 1e-75 MDSKVISYILGKLSWAVALALLLPLGAAIGSGEQALAPFLTAIAAAGVTGSLLRRYGRAA TADLTVREGLAITTLGWILVTFLGMLPYTVGGYLSILDGILESISGLSGTGATVFNDLTY VPAGILLWRAETHWLGGLGIIVIFIALFPQMGRGTIHLFNAESTGPSSARALPRIKEMAR ALFRVYVGLTMLAFAALKCCGLSFLAALEHAFSTIATGGFSPYNDSAAHFHSPLIEGVLI VFMLLSSANFGIYVAVRQRGIRVLLQDTEFRCYLGIVVAAAIAITLNLIWQMGMAPPTAL RQAAFQAVSLSSSTGFVSADFDTWPSFSKLVILGLMFIGGCGGSTAGGFKVTRVMLLCHM IREAVRQKIHPGVVVQVRSNHSEVSSDLILGVARFFFVYVMLDLLWTILLTWNGVPLFAA LGVSISTMGSCGPAFGIFGATCTYAALPAFGKVIVCVSMLMGRLESFTVLALLMPSFWQR RKGW >gi|290781052|gb|ADGP01000021.1| GENE 95 110002 - 110538 816 178 aa, chain + ## HITS:1 COG:SPy1409 KEGG:ns NR:ns ## COG: SPy1409 COG1555 # Protein_GI_number: 15675329 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 39 176 69 217 220 97 33.0 1e-20 MVARNIMLGVVVFFGIIFGTVRWWNVTESMAQPVPQMTVPEDAPVYVFVTGAVRHPGLYS FSETVRQGEAVQAAGGVVAYADVHAVNLAARIKDGMHIHIPYTLTGVPTAPPENEDTINI NEASAEKLATLPGIGMATAKKIVKYRNQHGPFMQGEDLRQVKGIGDSKYEELKDKIRV >gi|290781052|gb|ADGP01000021.1| GENE 96 110535 - 112655 1499 706 aa, chain + ## HITS:1 COG:all1983_1 KEGG:ns NR:ns ## COG: all1983_1 COG0658 # Protein_GI_number: 17229475 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Nostoc sp. PCC 7120 # 125 571 175 612 612 99 23.0 2e-20 MIYWGPVAAVGTAVGMLGYAWMTIPYIGGWMVLGIGCVGSVLFRRSLFLYVTVTILAMAI GMLRMGQVGDAYGKEWENRFGKPLQVMGTILEKRASYIDERGSMVTYIMQAEKVGIGREV PYASGNGGNIYVTLPSSPRIGIGSTVQVAGVLRPLTYTMNPGTYDRFHKDRERNIVGRLR VKKIADMQLLQNGKGRRYYVQRVRETLYHRFCRVLPTEKARILSSLLFGGHYDELPPALI RQFAATGLIHILSVSGSHMALLFAALQVIGRRLGWPQRVRFIFLVGIVCTYGALSEFAAP VVRSLIMGLISAYGVVLKRRYMGCQALGIAIAGMLLYNPFMVFDLSFRLSCGASAGILLW YSKFQFILQRFPSFLRESLALCASAQILVMPLVLASFQALPVYSFIANLLVAPVLDLVIL LGLGSVITGSIWTPLGDIFLYPLQWLLTWAIQGNACLAAFPYSRYWHGALSVTTAAAWYI AAGAVFLKKRQGYIAAGLSSVVWVSGQMVAWLTVPAITVYSFDFGRDSAVCAVTADNRVR LWYNKENFSSREDISYTVIPALQYEGIFALDACTVSGKDTKNTARQLAPYLTAGKVRQCF GRPPGCTVFSGRQPYYLSWGRKEDRFPAGACVEVFKADKTEFFTMPEGVCAWIVHCPYKG REACAAWKQAAAYKGVYCFAPATDGRVRMTYVRNRWLWETYKGARE >gi|290781052|gb|ADGP01000021.1| GENE 97 112652 - 113665 1058 337 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0959 NR:ns ## KEGG: Vpar_0959 # Name: not_defined # Def: DNA polymerase III delta # Organism: V.parvula # Pathway: Purine metabolism [PATH:vpr00230]; Pyrimidine metabolism [PATH:vpr00240]; Metabolic pathways [PATH:vpr01100]; DNA replication [PATH:vpr03030]; Mismatch repair [PATH:vpr03430]; Homologous recombination [PATH:vpr03440] # 1 316 1 304 325 77 22.0 6e-13 MKQIAIIYGTESYLRERHRREFLQACRQRAGADMDIQTAERDISLSRLAEMIGETGLFCR AAVTICREDTLLRGKHKGASRKKMTAEEEWFLQRLAHFPEENGLLFYREGMLDEKDPFFR ALSALATVWYCPPVSSKEIMRYVNAFFQEQGHTLTAQGTQYLQNLFATWQDISLQYIYTE IQRICLQAEAEAVLDVADLQGMFSGAVEKNIFSFLDFFFSRKTAEIVSFFPGLFNPKVFL KSVGAILTQLHILLEYKELTAMGMSERQAVALMQEINKGCNVKGIVWHLKKKEKYWTIKE LRELIAAIFKLQVNLRRGIAKEADMGPLLCLYSSGKR >gi|290781052|gb|ADGP01000021.1| GENE 98 113697 - 117296 3652 1199 aa, chain + ## HITS:1 COG:BS_polC KEGG:ns NR:ns ## COG: BS_polC COG2176 # Protein_GI_number: 16078721 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Bacillus subtilis # 360 1197 610 1437 1437 991 56.0 0 MDVWHIVPKNEIWVENTGKEQVRITEICLQSPEPRWQVHTISAHPVTDMETLRLLVCRTL GLQGTVTIEATVMPEEAATETDEVLQSVADFYTDDLEGYDIPHEDCYEALYEETPDIYDE TYRKACRAAERLPDSGSGKGNKTGQNSKVLYGKFFTGDPVAINSVLGEERNQVIFKGKVV NVDFRLLKSKRILLTFQMADKTNGISAKRFLEVANQGNSKFKKKQSISPEAYERLQKQLS VGSYVSVRGDVQYDTYQNDYVLNVQDILVADDETVVREDTNPTPRVELHLHTVMSDMDAL ITVKQLIKTVKKWHHPAVAVTDHGVVQSFPLLQEISTDKSNQVKVIYGMEGYLFDDRIDR SYHIIILAKNQVGIRNLYRLVSISHLKYIYRGRPRIPRAILNEYREGLILGSACEAGELI RSMVQKKLPYEELKRIASWYDYLEIQPISNNGFLVREGLVKDEEGLRNINRTVLKIGDEL GKLTVATGDAHFLNPEDKIYREILMTGKGFEDAQYQPDLYFHTTDEMLKEFSYLGEERAR EVVITNTNKINEMIEDVRPIPKETLYFPKIAGSSEALKKMCYDKAYKLYGNPLPKIVADR LTEEFTSILGNGFGVLYYIAHKLVKHSHDDGYLVGSRGSVGSSFVATMADITEVNPLPPH YVCPSCQYSEFFIKGEVGGGFDLPHKKCPHCGASLHKDGHNIPFAIFLGFDGDKVPDIDL NFSGEYHPQAHKYTEELFGKDNVFRAGTIGAVKDKTAYGYVMKWAEKRGIKVNDAYINSL VSGCTGVKNTTGQHPGGVMVIPRDMDVHHFTPVQYPANKKDSGIITTHFDYHSIEGRLVK LDILGHDDPTVIRMLEDLTGVDARTIAFDDAETMSLFCSPAALGLTPEELGSPVGSLGIP EFGTSFVRKMLLDTKPKTFSELVRISGFSHGTDVWLNNAQDLITSGTVPLKEAVSTRDDI MNYLIQHGIQPKTSFKVMENVRKGKGIDKVNKVGEKTTDFEGELKAGNIPDWFIESCKKI GYLFPRAHAVAYVMMAFRIAWFKIHYPLAYYAAYFTIRAKAFKLSAMIHGLEVQKKVMKD IEAKGTKASKIETDLYSALELAVEMSLRGFSFLNVDIHRSQAKKFIICDGKILPPFTAID GLGDNVAEQIVAAREKAPFSSKEDLRLRGKIGQSLLDVMTEAGCLKELPEDEQMDLFAM >gi|290781052|gb|ADGP01000021.1| GENE 99 117379 - 117711 363 110 aa, chain + ## HITS:1 COG:BH0639 KEGG:ns NR:ns ## COG: BH0639 COG4496 # Protein_GI_number: 15613202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 14 96 13 95 100 92 54.0 2e-19 MSAEKSRQDAAHAQLFAAILELRNVQECHDFFEDLCTIAERKAMSARLEVARMLKNGDSY EDVVKKTGVSTATISRINRCLQHGAGGYTVILERMEQAGRMRQCKHDEDV >gi|290781052|gb|ADGP01000021.1| GENE 100 117794 - 118333 471 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968857|ref|ZP_06560394.1| ## NR: gi|290968857|ref|ZP_06560394.1| hypothetical protein HMPREF0889_1098 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1098 [Megasphaera genomosp. type_1 str. 28L] # 1 179 1 179 179 342 100.0 7e-93 MKSRLDVTIFGNGDMHVWKQCIYAELWQDYLSMRHRAEEYWKKGTKKGDFLARRYERAAF LSLQNFFACVLERWMVQIEAVQVSRVSLWEQCRVLLDRTCSPQTVAAYDFSRLHGQLEAA EHTSAVLEQLDWEQLAAMEKAMDDFLSLIEQNTSLRRFPKVNHSSSSVVERLGSLFRRH >gi|290781052|gb|ADGP01000021.1| GENE 101 118422 - 119246 994 274 aa, chain + ## HITS:1 COG:lin2225 KEGG:ns NR:ns ## COG: lin2225 COG1624 # Protein_GI_number: 16801290 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 16 274 12 271 273 233 49.0 4e-61 MNMYVPIQGFISSFRLLDIVDILLVAFVLYKLYYLICNTRAVALIKGLLVLGAVTVVSKV LDLHVINWLLQQGMTVILVALPVVFQPELRRALEQIGRGRFLRSGQGINTEELNRLVEEI AAVTESLSKTRTGALLVFEREVGLNDYIDTGIFIDGTVSRELLGNIFIPNTPLHDGAVII RENKIMAAACLLPLTSDRSLSTELGTRHRAAIGISEMADAVVVVVSEETGAISYTYGGHI YRHLEVKSLQKILLNFLRPAPQGWTNIFKWRPAK >gi|290781052|gb|ADGP01000021.1| GENE 102 119246 - 120160 1200 304 aa, chain + ## HITS:1 COG:CAC3078 KEGG:ns NR:ns ## COG: CAC3078 COG4856 # Protein_GI_number: 15896329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 10 301 11 312 403 70 24.0 3e-12 MTRIEKKWQVKLICLVVAVFLWFVIIGEQNPTSEGSYTVPVAVENLDSRYIASHVPRSVY VRLAGPRNTIINIDPSSIKAYVDLSAVKEGTVEAPIHVEIPGGTELKKQSQNRATVLIDV YAVKEFSVTPHIRGQVNGNAYVGNISVLPQKVTVSGARRLVRQVDNAMVEVGISDKPDGF TAMTPVRLLRADGTVVEGLTVTPWQTSVAVNLEPNAATKEVPVVVHTRGTFHKGLTEKNV IANPKTVTLRGDAAQLQSLDHWDLPAVSVTGITKNKTWKLEMPFVNGVTVTPDTIDVMLL TTKE >gi|290781052|gb|ADGP01000021.1| GENE 103 120174 - 121781 1316 535 aa, chain + ## HITS:1 COG:CAC3077 KEGG:ns NR:ns ## COG: CAC3077 COG2509 # Protein_GI_number: 15896328 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 30 527 31 539 540 462 46.0 1e-129 MLRVSNIRTEVPMRKTVAALAAKKIRCRVQDIEEVRIVRRSVDARRKPKVYLVFTADIIV RQEARIWRGCRDNKDIKLVTEAPAIAAARGKLPLRQRPIVVGTGPAGLAAAFMLAQYGFA PLVLERGQDVETRTACVEKFRHEGILCEHTNVQFGEGGAGTFSDGKLTTRVNHPLIRNIL HILVKAGAPEEILYTYNPHVGTDRLRQVVKNLRHMIMEAGGDVRFASCVTDIICNDRGQV QSVVVNHKEQYDTSVLLLGIGHSARDTYEMLHRHGMAMVFKPFAVGVRIEHEQHVIDRGQ YGNTASALGLEPASYALAYHRPDGRSCYSFCMCPGGEVVAAASEAGGVVTNGMSVYARNS GAANSALVVNVTERDIRGTDPLRGIAFQRRYEQLAYAAGGHNYKAPAQTVGDFLRIAAVS PGIHTYMPGVTWTDLSAILPAFVTQTLQEALPYFERKIKGFAAPQVVLTGVETRTSAPVR LLRDENRMSVGTAGLYPIGEGAGYAGGIMSAFLDGMETALTIIRKFKPLEVQVDG >gi|290781052|gb|ADGP01000021.1| GENE 104 121774 - 123129 1785 451 aa, chain + ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 1 448 1 446 448 449 53.0 1e-126 MARLFGTDGVRGVVNDSLTPELTYHLGRSAAYVLGQEKEHPTFLIGRDTRRSGTMLESIL AAGIASAGGICHMAGIIPTPAIAYLTRTHHLDAGVMISASHNPFEYNGIKFFDSFGYKLP DNMEDRIEEFMLKDERSGGQSRPTGAAIGTITAWNDLQQEYSDFLYKTCDIDLQGLKIVY DGANGAASFIGPALFSRLGAEVIAIHTNPDGVNINAACGSTHLESLRKTVLETGADIGIA NDGDADRCLVIDEKGQELDGDQMMLLCALRLKEEGRLKKDTVVGTVMSNIGFHKALAAHG CKSAVTAVGDRYVLERMRKDGYCLGGEQSGHIIFLDYNTTGDGLLTAVQLLRNMRHWQKP LSELGKMMTRYPQILKNVKVQTKSGWEENNLIVAAISAGEEELGENGRILVRPSGTEPLI RVMAEGPDLEQLERIVADIALVVEHEMGGVK >gi|290781052|gb|ADGP01000021.1| GENE 105 123414 - 125243 2042 609 aa, chain + ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 609 1 608 608 692 55.0 0 MCGIVGYVGTREAADFLLDGLAKLEYRGYDSAGIAVYDQDRITVRKKMGRLINLLQEIKE HPVSGTIGIGHTRWATHGGPSDINSHPHTDMNGNFAIVHNGIIENYMEIKEELLKKGVVF RSETDSEVVAHLCADLYDGDFENTVRNVLRRLRGSYSLVFMSRFAPDRIICCKKDNPLIV GLGDGENYIASDIPAILSYTRKTYIMNDGEMAIVKKDGVWVTDLEGKPISKKVFVVNWDA EAAEKGGFEHFMLKEIYEQPKAIRDTLSCRMTADGKQVRFDELNWTPEDVRSIGKVLIIA CGTAYHAGLLAKYFIEKLARIPVEVDIASEYRYRDPLTDSKTLSIIISQSGETIDTLAAL KEAKRRGARSLAVTNVVGSSVSREADQVVYTWAGPEIAVASTKAYTTQLAALLLLAIYMG QLNGVLTTTAVTKLLQDLKKVPDQCEDIFSQVNTVKALAKAFTDHEDAFFIGRSMDYGLA MEGALKLKEISYIHAEAYAGGELKHGTLALIVPGIPVIALATQGDVEEKMISNIKEVKAR DAYVIGIAKASDREVGKTVDVVLHVPDSDNFVVPILAVIPLQLLAYYVAVLKGNDVDKPR NLAKSVTVE >gi|290781052|gb|ADGP01000021.1| GENE 106 125449 - 126183 979 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371312|ref|ZP_03854796.1| SSU ribosomal protein S2P [Veillonella parvula DSM 2008] # 1 239 1 239 281 381 77 1e-104 MAVVSMKQLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKTEEAYNFARDL VADGGKILFVGTKKQAQESIKNEAERCNMFYINERWLGGMLTNFQTIEKRVKRLKLLEKQ AEDGTFDVLPKKEVTILKHEMEKLHKYLGGIKEMKKLPDALFIIDPKKEEIAVAEARKLH IPIIATVDTNCDPDLIDFPIPANDDAIRAVKLLSGKIADAVLEGNQGEQVEEPVADDTGV AEEN >gi|290781052|gb|ADGP01000021.1| GENE 107 126268 - 126915 943 215 aa, chain + ## HITS:1 COG:sll1261 KEGG:ns NR:ns ## COG: sll1261 COG0264 # Protein_GI_number: 16330738 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor Ts # Organism: Synechocystis # 3 215 4 217 218 202 53.0 3e-52 MAITASMVKDLRTKTGAGMMDCKKALAATDGDMDKAVDFLREKGLAAAAKKADRIAAEGL VYSYIHGNGRIGVLVEVNCETDFVAQTDGFKALCKDIAMQIAAAKPAYLKREEVPQEVLD HEREVLRQQALNEGKPEKIVDKMIAGRIEKYYKENCLLDQEFIKDSDKTISQVITEQIAK IGEKIDIRRYVRYELGEGMEKRNDDFVSEVMAQVK >gi|290781052|gb|ADGP01000021.1| GENE 108 126994 - 127719 958 241 aa, chain + ## HITS:1 COG:lin1350 KEGG:ns NR:ns ## COG: lin1350 COG0528 # Protein_GI_number: 16800418 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Listeria innocua # 1 240 1 241 242 299 65.0 2e-81 MEAKKFKRVVLKLSGEALAGSQGYGIDTTTVEHIARQVVEVNKLGIQAAIVVGGGNIWRG LSGSAKGMDRVSADYMGMLATVMNALALQDALENFGIATRVQTAINMQQVAEPYIRRRAI RHMEKGRVVIFGAGTGNPYFSTDTTAALRAAEIEADAILMAKNGVDGVYDSDPKLNPQAK MFKKLSYLDVINKDLKVMDATATTLCMNNDIPILVFNLDVSENIVAAAKGEDLGTLVDKK G >gi|290781052|gb|ADGP01000021.1| GENE 109 127765 - 128325 733 186 aa, chain + ## HITS:1 COG:alr1208 KEGG:ns NR:ns ## COG: alr1208 COG0233 # Protein_GI_number: 17228703 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Nostoc sp. PCC 7120 # 11 186 7 182 182 172 57.0 5e-43 MDGKAVVQNYEEKMDKTIEALKRDFTSIRTGRASTSLLDRVTVEYYGTPTPIKQVANVSA PEPSLITIVPWERKILGDIEKAILKSDLGLNPNNDGAMIRLEIPKPTEERRKELTKKVSK YAEEAKVVIRNIRRDANDSIKKAEKAKEITEDESKDVQDKIQKLTDKKVKFIDELKLKKE KEVMEV >gi|290781052|gb|ADGP01000021.1| GENE 110 128325 - 128558 140 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968868|ref|ZP_06560405.1| ## NR: gi|290968868|ref|ZP_06560405.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 77 1 77 77 144 100.0 3e-33 MDKEKFIGMPLRYAKSVLEAEHIPYSIERTGSRSRFFVCNEQEEYVIRVIEAAGELCLLV NYSLEQSDSVRQVLTGR >gi|290781052|gb|ADGP01000021.1| GENE 111 128563 - 129339 783 258 aa, chain + ## HITS:1 COG:all2995 KEGG:ns NR:ns ## COG: all2995 COG0020 # Protein_GI_number: 17230487 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Nostoc sp. PCC 7120 # 17 255 7 247 249 248 48.0 1e-65 MFHLFKKKTASTEYPKKITENMLDVSRLPRHVAIIMDGNGRWAKRKNLPRHIGHRVGADT LKKIVTAADDLGIKVLTVYAFSTENWKRPEAEVSYIMKLMQDYLRKNLLELAEHNVRLQF IGDISCLAPELQKSFADAVQSMENNTGLLLNIAVNYGGRAELTRAVRTLAEQVEQGKVRA GDIDEERLAGELYTAPDNDVDLVIRPGNDFRISNFLLWQIAYAEFWYTPICWPDFTKDTL LEALYAYQGRERRFGGLK >gi|290781052|gb|ADGP01000021.1| GENE 112 129356 - 130186 939 276 aa, chain + ## HITS:1 COG:slr1369 KEGG:ns NR:ns ## COG: slr1369 COG0575 # Protein_GI_number: 16330180 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Synechocystis # 1 267 1 279 293 115 34.0 1e-25 MLGKRIISGLIGGVITIGVIYEGNWLFFIFMMLLAVLAWKEYAQLMDKVSVQVPLRAGMV WLLCFLGTIWCGAWQAVLLMGAILLYGLLLQPVFRHQYSTLRDVAYSLLGLVYVGIGFAA LLVLRCGNLGLQLSDQFSSQFIDPSRILVFLLIFATWASDTCAFFVGKFWGRHKLCPSIS PGKTREGMVGGIAGTIVVALAVAVWGQFSLLHGGVLGILIAFTAPAGDLIESIMKRTCRT KDSGALIPGHGGVLDRFDSLLLAAPVVCVYLYFIAR >gi|290781052|gb|ADGP01000021.1| GENE 113 130199 - 131344 1169 381 aa, chain + ## HITS:1 COG:lin1354 KEGG:ns NR:ns ## COG: lin1354 COG0743 # Protein_GI_number: 16800422 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Listeria innocua # 1 377 1 376 380 338 45.0 1e-92 MKRIMILGSTGSIGRQALSVIAAHEQQFSVCAVAAHTHWQEVATQIRQYHIRFACMTNAA AAAALQQEMGRQCTVFFGTAGMLQLMDAVQADMVLTSLVGAAGIEPTLYAIQKGMDIALA NKETLVAAGELVMQAAKDKGVHIVPVDSEHGAIFQCLQGRRAEEVDSLLITASGGPHFHR PVSEFSKITVEECLTHPTWHMGKKITVDSATMFNKGLEVIEAHWLFHLPFDQIEVVIQPQ SIIHSMVQFVDSSVLAQLGMPDMRLPIQYAFSYPARFPVSGAKKISWKELRHLDFFAPCP EKFPSLPLAYEAGKAGGTLPAVLNAANEEAVYAFLRKEISFTRIFSLVAAAVDAHHVQPA TSLAAVREADRWARAYVHDKL >gi|290781052|gb|ADGP01000021.1| GENE 114 131368 - 132408 1058 346 aa, chain + ## HITS:1 COG:CAC1796 KEGG:ns NR:ns ## COG: CAC1796 COG0750 # Protein_GI_number: 15895072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Clostridium acetobutylicum # 5 342 6 333 339 181 32.0 1e-45 MGITIIATIFVFSVIVVIHELGHFMTAKMTGMQVDEFAVGFGPKLISHKVGSTVYSLRLI PLGGFNRIAGMTDTEQAMTAVRRNKCFISKSLPARLLVMAAGALMNFILAICLLWGVFFV AGTVQISPEPIIGQTINGSPAARANLQTGDRILAIHGEPIYQWQDIGRVLSKHQKDVVTV TFKRQGKEETAHLIPETDASSQRQIIGIYPVEQKQRHGFLQAGKLAAFQVGHLSGFMVQG IYQMVTGKAKADLAGPIGIAQIAGKAASVGFADLLVFTAFLSTNLGIVNLLPVPLLDGGH IIILLVEAIRRKKLPARALVYVQTAGMVILGALFLFSMFKDITRLF >gi|290781052|gb|ADGP01000021.1| GENE 115 132422 - 133489 1204 355 aa, chain + ## HITS:1 COG:CAC1797 KEGG:ns NR:ns ## COG: CAC1797 COG0821 # Protein_GI_number: 15895073 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Clostridium acetobutylicum # 1 347 1 346 349 356 52.0 4e-98 MKRRKALAVQVGKVGIGGTYPVSVQTMSTVTPAKEAEAVTDVLRLADAGAELIRFAVPDM AAAKGLAAVVAASPVPIIADIHFDYRLALQAVDSGVDALRINPGNIGDEERVIKVVEKVR PKGIPIRIGINTGSLPADILAAHGGHPTSAAMVEGALRHIRILERLQYSRMVISLKASDV PLMISAYQELAEKVPYALHLGVTEAGLVQEGTIKSAIGIGALLSQGIGDTIRVSLTGDPI EEIKVGRQILSALGLRTFGPTLISCPTCGRTKVNLIHLAEQVQTALATIHTPVKVAVMGC IVNGPGEAREADFGIAGGYGKGIVFSHGKILRTVEEDKLVDGLLEEIHKSIDSAE >gi|290781052|gb|ADGP01000021.1| GENE 116 133621 - 136908 2897 1095 aa, chain + ## HITS:1 COG:BH0069 KEGG:ns NR:ns ## COG: BH0069 COG1197 # Protein_GI_number: 15612632 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Bacillus halodurans # 243 1027 304 1102 1181 732 47.0 0 MEQLFTYSDHDAAIKAAADKFSQTGCYSIYGVGGSAKSFITAKGIRNMQHPVLIIAVGRE QVAQWMADLQFLLPEMPLYTFPFVTSEVFTTAVKSLERVAEQMKVLAHLRERKPCIVIAA AEEAAQYTISPENLDAAAVPLCCHESYERQVLVEQLIQSGYERVDLVERRGHFSVRGDII DIYAVNHRDPLRLEFFGDTLDSMRFFEVQRQISCQAVEQVRILPFTLLSLASVTDSTLPD YFSDGCVVWDEPNRIRESLKKIGKESDEYQKRLCPWSRWVKKPRTCTQIVLSLMAQAVPD FLLTGSAGFVAKRMASFQKQWPVLCEELVHWQQERKIVFVVMTDCKRRASLQARLRQEHI SVSPSSNSECCAGKIYIVDGELQNGFELPYAGVIVLCERDIYGMQKKRVHRYAGKSEKIN VFTDLKSGDYIVHHAHGIGRYVGLKTIEIDGVHRDYLEIHYAGSDILYVPTDQLRLIQRY IGNEGEIPKLNKMGGKDWQKTRAKAQKSVDNLAEKLVTLYAKREVVPGFAYPPDTPFQRE FEEAFPYEETADQLKAVAHIKAAMEKPYPMDCLVCGDVGFGKTEVAMRAIFKAVMGGKQV AVLVPTTVLAQQHYQTFTERLSPFGVKCAVLNRFCSYKERKEILARTLTGDVDVLIGTHS LLNKKVKFKNPGLLVVDEEQRFGVAQKEKWKAWAETIDVLSLSATPIPRTLHMSLVNLRE MCVIETPPTDRFPVQTYVTEYDARIVRDAVMREKRRGGQVFFVYNRVDTMARMQEELAAL LPELTIRMAHGQMSGGKLEEAMFDFYEGKYDLLLCSSLVENGLDVANANTILIYDADHFG LSQLYQMRGRVGRSHHLAYAYFFYRPQKVLSEVAEKRLEAIKEFTELGSGFKIAMRDLEI RGAGNLLGREQHGNIAGVGFAMYCQMLEAAIKRVKHGEEKITAPLETVLDIQVDAFLDDA YIPVSGQKIEMYQRLALADTEKELQELKNELQDRYGKATPPVQRLLRVAAIRMRAKQLGI VLLSQKKELLEIKWQSAQAAPLPEAMEPVLRSRMKIVRGLPNVRRFSLTGIEDVLSYVQY ILKSLETRRKEGALA >gi|290781052|gb|ADGP01000021.1| GENE 117 136901 - 138448 1380 515 aa, chain + ## HITS:1 COG:CAC3213 KEGG:ns NR:ns ## COG: CAC3213 COG2244 # Protein_GI_number: 15896460 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 1 445 1 441 512 203 31.0 7e-52 MHKSNFLRGAMILTLAGIVVKVLGGINRILLSRLLGGEGIGLYQMAYPIYILFLSIAGAG IPIAVSIMIAEKMAKGETAEAGRVFHIILAFMIPAAIGFGLLLAASAELFIHAGWVRDSR ALMPLLILSPALTLSIIACCFRGYFQGLQQMMPTAVSQMADQAVRVCAMLVFAMALMSHG IPAAATGAAAGAVPGAAIGLLIMLVFFWRHIRRQSVSGVVRDVTAGSVIKRLLALAIPVA AANMLLPAVAGIDLFIVPKQLESAGYTVHEATALFGYLSGMANGVIQLPAILTMALATSL VPAVSAAFSNGKHAVIIQRVHTVMRIANVITIPACCGLAVLAVPISRLLYATPAAGAAIC VLSISVFLVGVQQITGALLQGMGRTVIPLVNMAIGAGIKIFLSWHLTAVPALGIVGAAWA TNAGLLAAALLNLYFARRFVAYRIQGGQLARIAVAAVSMAAAARGIYGLLYAHMGGTEVT MLAMVVGLVIYGIGLWGTKAVTRQDLGAISFFRKT >gi|290781052|gb|ADGP01000021.1| GENE 118 138464 - 139483 1139 339 aa, chain + ## HITS:1 COG:BS_yabN KEGG:ns NR:ns ## COG: BS_yabN COG3956 # Protein_GI_number: 16077126 # Func_class: R General function prediction only # Function: Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain # Organism: Bacillus subtilis # 88 336 239 488 489 221 46.0 2e-57 MKEIEIVYLGTEETDREETYWRKPPFEERYKPIISYLLTTAAVRDVVHTVPGGPAMAAKV KDMLEHAAQERAEKWERCPFDVQPLVQVMAALRGPQGCPWDKKQTHRSLRRFLLEEVYET LDAIDKDDKDGICEELGDILYQVIIHARIAEEEGLFTAQDIVTKVCDKMIRRHPYVFHVK GLENMPVSMLNWDRLKQRERRQQHKRLLDGVVGGMPSLLTAYKLQEKSAGVGFEWDTDAA VWAKAAEEWQEFREALQEGDAAHAEEEAGDVLFIFANVCRRYHIEPECALHRANKKFYRR FSYVEEKVRQSGKPWQMFSLAQLDAFWQEAKRQERRQAL >gi|290781052|gb|ADGP01000021.1| GENE 119 139537 - 139815 416 92 aa, chain + ## HITS:1 COG:BH3356 KEGG:ns NR:ns ## COG: BH3356 COG0776 # Protein_GI_number: 15615918 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus halodurans # 1 89 1 89 90 97 64.0 5e-21 MNKTELIANVATKSDLTKKDAEKAVKAVFESISESLTKGDKVQIIGFGTFEVRQRKAREG RNPRNNEPIQIEASKTPAFKAGKQLKDLVNNK >gi|290781052|gb|ADGP01000021.1| GENE 120 139951 - 141102 1311 383 aa, chain + ## HITS:1 COG:CAC2897 KEGG:ns NR:ns ## COG: CAC2897 COG0707 # Protein_GI_number: 15896150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Clostridium acetobutylicum # 4 340 2 345 384 206 32.0 6e-53 MKKKVLILSASIGTGHTQAARAIEEYMQQAAEEYEVEHIDFLSNEALSIDNIVKETYIKI LDLFPMLYDLMYYSSQGYKKGWFVKTMFSWGLKRRMLRVLADKHPDLLIFTHPFPAGTAA LLKRQHRLQVPMMGVITDFAVHQLWVYPQIDRYCVAASPLKDLLAAQGIEAEKIAVTGIP VRNIFSYRQWGNTRKKGNNVLIMGGGLGMGSIRQSLVALDRLTAIDSFSVVTGHNADLYD EICRLRQELRHPVEVLGYTNDIPALMAQSALLVTKPGALTCTEAVTVQIPLVLYSPIPGQ EEANAAYMRDKGCARWVKTKEELSAVVAELLTHPDRLRAMSVASRKCHQHGAELIGEQIR QVLYPAERPETIWNKKPCIREQS >gi|290781052|gb|ADGP01000021.1| GENE 121 141191 - 141961 817 256 aa, chain + ## HITS:1 COG:SA1536 KEGG:ns NR:ns ## COG: SA1536 COG0730 # Protein_GI_number: 15927291 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Staphylococcus aureus N315 # 17 253 15 251 256 153 40.0 3e-37 MSASSGIQTIFFIMIGGFMAGFVDSIAGGGGLISLPILLAAGMTPHLALGTNKFSATFGA CMSARQFIRAGKTDMSLLRRLIPCSFLGAVAGCVLMLYISAKWLQPIIIIALIGSAFFVF FRRHLGAAMTYSGESRTVLIKSSLMAFVLGMYDGFIGPGTGTFLIVFFAMLGFDFVLAAG NAKVLNLISNLTSFVIFVACGKVYYVYGILMAVCIFLGAFFGARLAIRKGIRFVRYVMLT VTCALIIKLIIQYFVY >gi|290781052|gb|ADGP01000021.1| GENE 122 141973 - 142725 238 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 4 245 3 238 242 96 30 8e-19 MDSKKTIVISGGTSGIGLATARILVAQGHNVILLGRSVEKGEKAVDTLAAYAGQVRFIAA DVCDESACQRALAQGEIYFGAVHGLVTAAGQYEEKLLQYETLAAIEKLFAVNVYGTMTLC RLIQPYLRRSAGGSIVTVSSDAGLQGNVACSVYGATKGAIVAFTKSYALEAAPYGIRVNC VCPGDVQTPLLREQLQRNPKLTMSELREHYPLYRIAEPAEVGEVIAFLLSEKASFMTGTA VPVDGGLTSW >gi|290781052|gb|ADGP01000021.1| GENE 123 142784 - 143749 1179 321 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0129 NR:ns ## KEGG: Acfer_0129 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 38 211 7 180 415 126 39.0 1e-27 MSKETKDWLSDDTGTVSGEDKTKEELQTELQALQAEVKRLKETQAEESATQETAEESEQV WEALEDADEDIEIKAETLCRWGAARAGAIVIAPVVGTAALMANEVYMVSRIARLYHVKLT ERALMGFVGALISRVAGHLLTTLIPFSVIQVPVAVGITYSLGRVTQRWLQDGMPEDMQPY MKMMDEWKDKARDQVEKLKDHPLKNLPLGDETIDFMKRWGRLAVEKWQVVKEKGQDIYHS VTHYDDLVDEILAEEQKKKAETASADTETEETDGHSAASATDAAADREAAPAPDGKDSGA TLAEEQVAAAIANAKLPLDDN >gi|290781052|gb|ADGP01000021.1| GENE 124 143760 - 144122 354 120 aa, chain + ## HITS:1 COG:CC0123 KEGG:ns NR:ns ## COG: CC0123 COG3339 # Protein_GI_number: 16124378 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 6 103 29 126 136 59 35.0 1e-09 MIFISRLARRYTAQKWLDFVQHIKHKLSFLPRAWMLFFCLRDADTPKTVKVLLMGALAYL MVPWDVLPDTVPVIGWLDDAAVIAWVVRFAGTYIKPEHREKARLIFPFAARYGEYNEGNR >gi|290781052|gb|ADGP01000021.1| GENE 125 144186 - 144575 589 129 aa, chain - ## HITS:1 COG:SPy0844 KEGG:ns NR:ns ## COG: SPy0844 COG3576 # Protein_GI_number: 15674878 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Streptococcus pyogenes M1 GAS # 3 127 2 128 133 116 52.0 9e-27 MKLTNEMKELIKVQLAYIATVDANGNPNIGPKRTMRVLDDTHLIFCENTDGQHHANIKAN GKISVAFVDREANKGFRFSGKATSYTEPEKMDLAAKLVGAAPKAAAVIIDIEKMYTLDSG PKAGKLIEE >gi|290781052|gb|ADGP01000021.1| GENE 126 144830 - 145627 821 265 aa, chain - ## HITS:1 COG:all4699 KEGG:ns NR:ns ## COG: all4699 COG0682 # Protein_GI_number: 17232191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Nostoc sp. PCC 7120 # 8 257 19 270 283 113 32.0 3e-25 MHQYLFFIGSFPLRAYGLLFMLGIICAAITAYVLTKKDGHGLHRHILDFTMCCAVAGIIG GRLWDVFFFDWSYYGRHLLQIPFVWQGGMAIQGGIVFGTLAGIAYTKIHHIDTWRFADLL APAIILGQSVGRMANVMNGDAFGHPTGGNFGILYPDTTLAYATYGNQPLWPAEIWEGQID ILIFVALLLFSVFPHHKGQVFCLYVMLYSLARFFLEFLRGDYTVLALGLKSAQWTSLIAF IVALIIFIFLIYYRRTPKIKNTCRA >gi|290781052|gb|ADGP01000021.1| GENE 127 145949 - 148429 2790 826 aa, chain + ## HITS:1 COG:TM0168 KEGG:ns NR:ns ## COG: TM0168 COG0495 # Protein_GI_number: 15642942 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Thermotoga maritima # 1 825 1 824 824 918 53.0 0 MEKYIPQEIEKKWQEIWRQEHRDGCKNEDARPPYYVLEMFPYPSGNLHMGHVRNYTIGDV MARYRRMKGFNVLHPMGYDAFGMPAENAAIKHNIPPAEWTYKNIENMTRQQRELGLSYDW DREVATCHEEYYKWTQWIFELFYKRGLAYRKEAKVNWCEHCNTVLANEQVIDGTCWRCDQ PVVKKDLKQWFFKITDYADQLLEDLKLLPGWPERVKTMQKNWIGRSEGTELSFDVPSIHK RVQLFTTRVDTVFGVSYIVLAPEHPYVAELIKDKENEAELQAFITRMKNMSDIERTANDA KKEGMFTGAYAVNPLNGAQVPIWIANYVLADYGTGAVMGVPAHDQRDWDFAHEFNLPVHL VIQNKTHTLSIETMTEAYHESGTLVNSGDFDGLTDAEARKAVTQWLQEKKLGKGTVNYKL RDWLISRQRYWGAPIPIIYCPQCGEQLVPEEQLPVTLPTDVTFTAGAVSPLATSREFVHC TCPKCGGPATRETDTMDTFVCSSWYYLRYTDARNTAQAWNPEYAKKWLGVDQYIGGIEHA ILHLMYSRFCMKVFHDAGLVAVKEPFERLLTQGMVLMDGSKMSKSKGNVVSPEDIIAKYG ADTGRLFILFAAPPERDLEWSEQGVEGSYRFLHRVWRIVEQYMDMLDTAETAKRPYTEAE KALRRQEFLSIAKVGEDIQGRDGKYSFNTAVSSIMEYVNALYAYAGKEKTIQKEVGVEAI RNLLKILAPFTPHIAEELWHQAGFSGSIHGQSWPEVEAEALKVAAIEMPVQINGKVREHI TVPTDCTAEDIKASVLQQPRIQEWLKDKTVVKCIIVPKKIINLVVK >gi|290781052|gb|ADGP01000021.1| GENE 128 148478 - 149092 483 204 aa, chain + ## HITS:1 COG:BH1281 KEGG:ns NR:ns ## COG: BH1281 COG0494 # Protein_GI_number: 15613844 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Bacillus halodurans # 24 198 28 203 207 107 36.0 2e-23 MKGYTSWPVRAVRQNSCLQTEDCAVLVPLLYDRETTEEQVLLEVRSAGLRRQPKEICFPG GHIEAADSSPWAAAMRETAEELGIDAAGIHYIGALDYVESPIGVRVYPFAARLDTRRWRP ARAEVDHVFTIPLSFLQKQTPEIAYFQLQGRPLSPSLITMGVPENWRPRTTYEVKIFTYK NYKIWGITAQILDNFLGIRAIIQT >gi|290781052|gb|ADGP01000021.1| GENE 129 149552 - 150691 1413 379 aa, chain + ## HITS:1 COG:CAC2711 KEGG:ns NR:ns ## COG: CAC2711 COG1960 # Protein_GI_number: 15895968 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Clostridium acetobutylicum # 1 379 1 379 379 419 57.0 1e-117 MNFNLTDVQQEFVKLAKDFGEKKLLPTVMERDHKGEFNEELVAEMLGLGLTGAYFEEKYG GAECDVLSYILAVEELAKYDAGMSITLSATVSLCANPIWQFGTEAQKEKFLTPLVEGEKL GAFGLTEPNAGTDASGQQTVAVKKDDYYILNGSKVFITNGGSADIYIVFAMTDKSKGTKG ISAFIVEKGTEGFTFGKLEDKMGIHTSKTMELVFQDAKVPAENLLGKEGEGFKIAMMTLD GGRIGVAAQALGIAEAALNDAVEYSKQRVQFGKPLCKFQNIGFKLADMKMKVEAARNLVY KAAFKKQEGQPFTVDAAIAKRYASDVAMEVSVEAVQIFGGYGYSEEYPAARHLRDAKITQ IYEGTNEVMLMVTSGALLR >gi|290781052|gb|ADGP01000021.1| GENE 130 150769 - 151575 1185 268 aa, chain + ## HITS:1 COG:CAC2710 KEGG:ns NR:ns ## COG: CAC2710 COG2086 # Protein_GI_number: 15895967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 1 261 1 256 259 228 50.0 7e-60 MEILVCVKQVPDTAEVKIDPEKHTVIRAGVPNIFNPFDQNALEAALQLKEAQDDVHITLL SMGPEQAKDVLREGLAMGADDAVLVSDRKLGGSDTLATGYAIATAIRKLAADKGIEMFDM ILCGKQAIDGDTAQVGPQVASELGIPQITGAAKLTVADGKARVEQQNEEGYIVTEAAFPV LITATKDLNEPRFPTIRGTMKAKRREIPTLSAADIGVDEARIGLSGSPTKVHKIFTPPQR TQGEIFKEEEAQANVDKLMEKLIARKVI >gi|290781052|gb|ADGP01000021.1| GENE 131 151596 - 152612 1273 338 aa, chain + ## HITS:1 COG:CAC2709 KEGG:ns NR:ns ## COG: CAC2709 COG2025 # Protein_GI_number: 15895966 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 1 332 1 332 336 318 51.0 8e-87 MDLAEYKGVYVIAEQFEGKLRNVSFELLGQGKKLAETLGEEVGAVLIGHNVKPLAQELLN YGAQKVYVYDDAALENYNTTAYTKVIEDFTAKHKPNVFLIGATNIGRDLGPRIANELKTG LTADCTELGVDDDKKTIIWTRPALGGNIMAEIICPNNRPQMGTVRPNVFKKPEPTEGAAG DVIDEKADLTEKDFLTKFIELIKVGGDGIKVEEADVVVSGGRGMKEEDFKEGGCLVELAN ILGGAVAASRAVTDQGWINPLFQIGQTGKTVSPKLYIAAGISGAIQHLAGILGSDCIVAI NKDEDAPIFNVCDFGIVGDAHEVLPLIIEAVKKHKGIA >gi|290781052|gb|ADGP01000021.1| GENE 132 152785 - 154296 450 503 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 426 1 407 458 177 30 2e-43 MKNYDVIIIGTGAANIVADAAIADHKSVAIIERGKFGGTCLNRGCIPTKILVTAANRIRE IREAAHLGIHVESVHADWAAVSRRMWHKVNENDSIRTYYEQFKNVTVYAGTASFVDKKTV RITDANNHTEEITGTAIIIATGGRTHVPSVAGLQESGYITSETFFGAAYPPEPYKSLIII GGGPIGCEFAHVFNAFGTHVTLVQHNIRLLPKEDESVSAYMLQQFEDYRIQVHLNQDTLS VRTENGEKILTCSDRTNGKKIEVHAEEILVAPGIKPLSDILHTERAGLATDARGYIRTNE FLETNVPGIWALGDCNGQAPFRHKANYEAETLAHNLFSHQPPENWRWVRYDAVPAVTYTY PETAHIGWTEAGAKKAGFTVETAINHYSATAKGYALGFEEGARNDGFVKLVLDKDSKKIL GVHIVGPEASILLQPFCNLFYCGTQTIQIREAEIASPTAARLRKLPLTRTLPPLSVYTLS ETMTPHPALSELTMWTRYYYEKK >gi|290781052|gb|ADGP01000021.1| GENE 133 154525 - 156786 2381 753 aa, chain + ## HITS:1 COG:BH2467_1 KEGG:ns NR:ns ## COG: BH2467_1 COG0550 # Protein_GI_number: 15615030 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Bacillus halodurans # 52 605 2 550 550 557 53.0 1e-158 MLKFPIKRTIIIDDTKKKGRKKKDGEKTVIHGTVNVRPKPKLEKPAVPPKNAKNLVIVES PAKAKTIERFLGADYKVLASRGHLRDLPRNQLGVKIEDGFTPTYTNMWDKRKLIEELQKE YVKSKNVFLATDPDREGEAISWHLAHLLEMDPKSPCRIMFHEITKKAVLAAIARPASIDL PKVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICEREEEIKAFVPEEY WTIAGTYQTDDGITLHTELFKINGKKAEIKNETQVQQILADLRWEQRGDLPHDPDRIQKT EKRRRRRQPQPPFTTSTLEQEGVGKLNFGAKKTMMLAQQLYEGLEMGEHGHVGLITYMRT DSIRINEDMIRAARAYIEKEYGAAYVPKQARIYKSKQSSQDAHEAIRPTSLEYTPAIVAP FLTRDQLRLYTLIWNRFLASQMEAVETEHMAILLGCGKYELRAAGYKVIFKGFTELYEDN QKDKSEELPEPLLQTVVHNKKLEPTQHFTQPPARYTEASLIKTLEEKGIGRPSTYAPIMD TIQKRNYVEKKDKQFIPTELGGIIVDLLKKYFAQIINVGFTAHMEEELDRIEQGKDSYEN VLQGFYNVFQPEMEEAEEAMEKVTVAGQESGQICELCGSPMVFKFGRFGKFLACSHFPEC RNTKAIVDDLGIPCPKCGQGSLIRRKSKRGRVFYGCSKYPECEFMLWNEPVNKRCARCGE IMVIKHYKKGPDKLFCSNDTCENHKKGEVVNET >gi|290781052|gb|ADGP01000021.1| GENE 134 156776 - 158089 1248 437 aa, chain + ## HITS:1 COG:lin1315 KEGG:ns NR:ns ## COG: lin1315 COG1206 # Protein_GI_number: 16800383 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Listeria innocua # 1 437 1 434 434 533 61.0 1e-151 MKRKVTVIGAGLAGAEAAWQLCRRGVPVELAEMRPYKQSPAHHTDLFAELVCSNSLRAAN IENAVGLLKEEMRQLHSLIMEAADATRVPAGGALAVDRISFSKYITEKLQAEPLVTIRTE ERTQVPPEGLCIIATGPLTGGDLAAYIQALTGQDYFHFHDAAAPIVTVESLDMTKVYRAA RYGKGGADYLNCPFTQAEYERFWQALTTAECAALHDFEKNDGVFEGCMPIEIMAQRGVDT MRFGPMKPVGLARPDTGEVPYAVVQLRQDNGSATLYNIVGFQTHLKFSEQKRVFSMIPGL EEAEFVRYGVMHRNSYINSPELLLPTLQYKKEPRLFFAGQLTGVEGYLESAATGLLAGIN AAHCAAGNACITFSRQTAIGGLSQYISTGPNPHFQPMNINFGIMASLDVRKRMKKKEKNA LLATRALAEVERMKEKI >gi|290781052|gb|ADGP01000021.1| GENE 135 158090 - 158653 757 187 aa, chain + ## HITS:1 COG:BH2464 KEGG:ns NR:ns ## COG: BH2464 COG5405 # Protein_GI_number: 15615027 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Bacillus halodurans # 5 183 1 180 180 234 67.0 8e-62 MNEYMATDFHATTIVAVQRNGQTAIAGDGQVTLGNAVIMKATARKVRRLYNGKIISGFAG SVADAFALFDRFEGKLNEHNGNLVRSAVELAKDWRSDKILHKLEALLLVADAERILLISG NGEVIEPDDGLTAIGSGGNYALAAGRALLQNTDLSAQDIALKALHIAADICVYTNHNVIV EEIKKEG >gi|290781052|gb|ADGP01000021.1| GENE 136 158656 - 160026 1245 456 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 6 456 8 466 466 484 54 1e-135 MGTAELTPKEIVRELNKYIVGQAEAKKSVAIALRNRWRRKHLPADMQDEIIPKNILLIGP TGVGKTEIARRLAKLVGAPFIKVEATKYTEVGYVGRDVEQIIRDLVTNAVRMVQEQESRR FQQQAEEAANKRILQIFWPKKEHAADDDHKESTSCTDSVVSVGSDKRQAMLEKISSHQWD EKEIEVKVSPQERPVQGVLMGSSNEELTNNFQEMLGSIMPKRKKRKKMTVAKAREIFRQE ELEKCLDMDVVIEKAITATEQAGIVFIDEFDKIAEKSRGGGSPDVSREGVQRDILPIVEG ATVNTKYGAVKTDHILFIAAGAFHVSKPSDLIPELQGRFPIRVELQSLTAEDFKRILTEP NQSLVKQYKALLQTDGVDLDFTAEGIEALAEYAYRVNLETENIGARRLHTMLEKILEDIA FAAPDITEKTIPVTKEFVDEKLGTVVDNTDLSHYIL >gi|290781052|gb|ADGP01000021.1| GENE 137 160036 - 161256 577 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 5 399 2 386 396 226 36 4e-58 MEKFAAVYVNRKGELAAKTGHPWVYGAEVTKVEGDYRTGDLVHVYSAKKRYLGTGFANDI SKIRVRLLSHNANDRFDEAFWQRRVQYAVSYRQTVMGDDLRCCRLIFGDADEMPGLTVDL YGDVLVCQTLCYGMEQRKDIIFRALVRSLAAMGIAVRGIFERNDVKVRELDGLVQTKGWY TADFLPTPGSTLTEITENGITYTVDVENGQKTGFFLDQKYNRRAVAGLAAGKHVLDCFTH TGAFALNAAKGGAAAVTAIDVSAEAVAMAEENSRRNGLASVVTVQQANVFELLTQLAAAK CNKYDFIILDPPAFTKSGKTVGRAVRGYKEINMKAMRVLPRGGYLATCSCSHFMTNELFC RMLREAAKDAGVQLRQIEERQQAPDHPILWNVPETNYLKFYLFQVI >gi|290781052|gb|ADGP01000021.1| GENE 138 161380 - 162888 1433 502 aa, chain + ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 3 490 6 493 496 407 44.0 1e-113 MQYKSTRSQETVSTAEALLRGLAADGGLYVPEVFPENVLQDWDEPGLSYQDVALHVLSYF FSDLTAPVLQEAVQKAYGENRFDHADIVPFYSPEAKVTISELFHGATLAFKDLALSIFPY LLSAAKQASAATADILILTATSGDTGKAALEAFKDVEGVDILVFYPAGKVSPLQELQMQT QTGKNVKVVGLVGNFDQAQTFVKEVFTDPGIREKVNRQGYIFSSANSINIGRLLPQIAYY VWTYRQLVERGCIERGESFNVVVPSGNFGNILAAFLAQKMGIPIGKFVCASNRNHVLTDF LMTGTYDRNRDFYTTNSPSMDILTAGNLERFLYYLSDGDRQAVSRWQTQLAEQNKFTLPN ALLEKMQRNWLAGYIDDKETEYWLRYVYHTYGYVCDPHTAVAYGVYEKVRRQLGEAHTVI MATAHPYKFPFTVGRALHLDEQEDPFAMALQIQANTGISVPPALGELATRPRRFTETVTP AELTQTVLDFAVMQRNRSDKNE >gi|290781052|gb|ADGP01000021.1| GENE 139 162902 - 163765 1031 287 aa, chain + ## HITS:1 COG:PA4834 KEGG:ns NR:ns ## COG: PA4834 COG0697 # Protein_GI_number: 15600027 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 2 271 14 282 284 181 39.0 1e-45 MIFSALSFSVQNMIVKELSYTMGTGEIAFFRGLFSSIIILALMKAQGIHFSKEDRGTLLF RGVMGGSGMICLFIALGGMPLADVSILSQLSAFFVMIFAAVFLKEVMPRNSVLPLIIIVV GACLVVRPWNFSSFNVYSVFVLIQAICAAAAYTTISKLTGSGKHHQYEIVFYFLVCACLS GIILMGGHFQMPDEWEWFLYIMLGIITVIAQILMTDAYAYANPVIVSFVAYIAVFFNAFW GFVVFNEMMTFMTVAGGLCIIGGSMYLTKLKHDRLAHAEELTKHKES >gi|290781052|gb|ADGP01000021.1| GENE 140 163773 - 164477 712 234 aa, chain + ## HITS:1 COG:ydjZ KEGG:ns NR:ns ## COG: ydjZ COG0398 # Protein_GI_number: 16129706 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 15 222 14 225 235 58 23.0 9e-09 MIFKPDITESQMKLLLLIALVSLGVMVRLLMPGFYTHVWQFAYTGDIEGTVSYLRSFGMR AAVLSAGITVFVTMTGILPSIFISAANGIVFGLVGGILLSWVSETIGVIISFWLMRTFLR RQAQILIHKSRMLTKLEQYSTFRAMLAARIVPYSPNGLVTALGAVSQLTYKDYMLACLVG KFPSVALEVVVGHDVLSGEEHVMRLLVSVLVIVSVYVFLGQRRKKQCAINEVEE >gi|290781052|gb|ADGP01000021.1| GENE 141 164490 - 164939 546 149 aa, chain + ## HITS:1 COG:no KEGG:Ppro_2887 NR:ns ## KEGG: Ppro_2887 # Name: not_defined # Def: C_GCAxxG_C_C family protein # Organism: P.propionicus # Pathway: not_defined # 6 140 13 146 150 107 46.0 2e-22 MKKEYELARKYHLEGNNCVESIVKTCNDSLSLHLPEAAIRMVSGMGGGLGRSGCVCGALS GACLILGALAGRVDPSEKPLPEVYQYTGEFHDRFKKHFGATCCRCLNRLQFGTPEYRKYC INITATAADMLSDFIAEKGLDTQGHRKER >gi|290781052|gb|ADGP01000021.1| GENE 142 164990 - 165670 653 226 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968900|ref|ZP_06560437.1| ## NR: gi|290968900|ref|ZP_06560437.1| hypothetical protein HMPREF0889_1141 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1141 [Megasphaera genomosp. type_1 str. 28L] # 1 226 7 232 232 462 100.0 1e-128 MGILHKSREESLIALSRLMNAGVRAQVELDNQSILLYRLGRRSDKLLVQYEGRDFRLCGN FIARKEIDPLYAGDLDTVMALLKKDKMPGIPVKNIFINILYVYQRAAGAYIPANSEIFVL REVNRRQYEFMSLDGRLVGEGVNVWQSQCQRLQEEWERWGEMDTPPAVKVEADGKATALT EVLPLLASKQAVHISPSLYVPWHIAESRYGLHSLEEMNGPAPCEML >gi|290781052|gb|ADGP01000021.1| GENE 143 165744 - 166988 1091 414 aa, chain - ## HITS:1 COG:BS_ampS KEGG:ns NR:ns ## COG: BS_ampS COG2309 # Protein_GI_number: 16078509 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Bacillus subtilis # 5 408 6 409 410 356 44.0 5e-98 MPTQQVLRAYAQVLLQKGINLQNKQLLVLSAPVEAHEFVAVITAEAYKAGASQVIMDWRC DPLTRLRYEQEEVSLFTEFPSWKRDFYLHYYHKKAAFINLISANPSLLQGISSEKITAWQ HARHNALQEYISGMMASQVPWLIAAVPGKEWAQLLFPAAGTKAIELLWQKILSAARANGE NPLADWDRHLLQLERRRRWLTAHHFVSLHYKNARGTDLQIGLPEHHIWQGGQEETAYGHF FNANIPTEEVYTAPRADQVNGTVYNTKPLVYNGNIIDQFSLTFQAGKVVAADAEIGNELL QTILQMDENACRLGEVALVPYHSPISLSHTLFYETLLDENASCHLALGAAYPTCIQNGSA MTKEELQQAHINDSVIHVDFMIGSEDLQITGRTADNKEIPIFTNGDWSASDPQS >gi|290781052|gb|ADGP01000021.1| GENE 144 167011 - 168354 1439 447 aa, chain - ## HITS:1 COG:BH0860 KEGG:ns NR:ns ## COG: BH0860 COG0534 # Protein_GI_number: 15613423 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 10 437 12 439 458 307 39.0 3e-83 MYLPHAFQFKHFFTLFFPLLLTQAAQVGTSTFSSIFSGQAGTLDLAGVAVAVNIWYPLFA GISGLFFGVSPIIAQLRGAKKTADIPQYIIHSMYIAIFFTVLLLFIGYFCLTPVLRLMGL EPTVYYIAKHYLLALAFGILPIFLQATLRYIVDAHGMTRVSMAILLLNLGVTLLLFRLLI FGAGPIPAMGGIGTGYAITIGAWISFLIFAVLLHYLEPFRSYQLWTKFRPFCRHYCQQEL KIGIPIFIAVFCEAGLFSAVGLLMAEFGTVYLAANQAAISYSTFLYTFPWSVSLTATIVI GYEVGAKNYEGARQYARLCQMTALGTSVIIAFLTHTFMTPIGRLFTQDPITLQAITHFLF FAVLFTIADAAGTPVQGILRGYKDVTFITYISFITYWLISIPMGYVIAHYTSLGAYGYWL SSVISLSLNAAALNFRLWHYTAYPDHT >gi|290781052|gb|ADGP01000021.1| GENE 145 168425 - 168691 248 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371391|ref|ZP_03854875.1| SSU ribosomal protein S20P [Veillonella parvula DSM 2008] # 1 86 1 86 86 100 60 6e-20 MPQIKSNIKTMEKDAARHAANSQVKSSVHTAIRRTEEAITAGDIEAVKVAFNKAGSVIDS AAQKGVLHKNTAARKKSRLAAKVNAMAK >gi|290781052|gb|ADGP01000021.1| GENE 146 168793 - 169362 748 189 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 130 1 130 176 91 40.0 9e-19 MLYLILYGEFFRIGLCCVGGGYAAMPFIQEVVVYQHHWLTLRQFVDIFTISQMTPGPIGI NAATFVGTKIAGLGGALAATLGFVSPSLLLGILLARLLQKYGAFDPIRGILNGLRPAVIA LILLAGLSFFCLTLWQSDSLPTHLSMPHMGHLCILCLSWIGLRKKMNIIIVLLLSGLLGL LTGVPALFS >gi|290781052|gb|ADGP01000021.1| GENE 147 169371 - 169931 433 186 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 11 184 8 180 186 77 28.0 2e-14 MKKRSLKFYWQLFTSTFGISAFTVGGGFVIVPLLKAKYVDEYGWISEKEALDMVAIAQTM PGVIAANSTILLGYRMAGIAGAATALCGTVLPCLITLTLISYCYSYIVTNPYIDLILRGM QCGATAIIGNVAWNLFYAQWEKKFLLPLLIIIVTCIANLFFHVPIMALLGIDALVGLFLL RDPKYN >gi|290781052|gb|ADGP01000021.1| GENE 148 170074 - 170241 99 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968906|ref|ZP_06560443.1| ## NR: gi|290968906|ref|ZP_06560443.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 55 1 55 55 94 100.0 2e-18 MGRTFILACAVFCWGKTWISYTPPIFHAAIFFTVVFIISSSVAYYHNWQRMKKKR >gi|290781052|gb|ADGP01000021.1| GENE 149 170452 - 171009 741 185 aa, chain + ## HITS:1 COG:DR0776 KEGG:ns NR:ns ## COG: DR0776 COG0703 # Protein_GI_number: 15805802 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Deinococcus radiodurans # 5 142 56 191 238 83 36.0 3e-16 MKRNIVLVGMMGSGKSHIGRKLAQRLDWQFVDTDRRIERVEEKSLADFYFSAGEKAFRER EINILQQVSRYHEAVISFGGNFPMSVETYRILHRYGFIAALLTEPFRVEERVSRHIGKRP TVDYDNLHDFVRKMLKEWETIYPYCDCVIDTTGGGAIQIVDNIIKTVRKKNIIFAQRSKR EVRQG >gi|290781052|gb|ADGP01000021.1| GENE 150 171006 - 171968 1248 320 aa, chain + ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 3 320 2 319 319 293 48.0 4e-79 MTKKIAILTSGGDAPGMNAVIRGVTRYALAKQWQVYGIVRGYEGLLHQEMIPLGRRDVGE IIHRGGTMLRTARCAAFYQEEKRREAAAFLQNQGIEALVVIGGDGSMRGAQGLSAYGIVT MVIPGTIDNDMAGTQYTIGFDTAVNTVLSSVNKIRDTAFSHERVAVIEVMGRSAGFIALE AGMAAGAEVVLVPEYAVNLEDVCTQLSRSHEQKKMSSIVIVAEGASTGNEVAAYIKAHTS LETNLTVLGYVQRGGSPSAYDAVMAGRFAQCAVDSLAAHKKNCVIGLWEQQVVATPYEEA QAFRYPLDHNLYTLVHILGR >gi|290781052|gb|ADGP01000021.1| GENE 151 172123 - 172791 899 222 aa, chain + ## HITS:1 COG:alr3187_2 KEGG:ns NR:ns ## COG: alr3187_2 COG0765 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Nostoc sp. PCC 7120 # 8 213 14 224 240 196 51.0 3e-50 MSSFDFGLIWDSLPLLIAGAGVTIEITAISVGLGFILGLVVSVCRLSGWKILKAVAVCYV NILRGTPLLVQIFLIYFALPMLIGQRINPFLAAVAACSINSGAYVSEIFRAGIQAVDRGQ MEAGRSLGLSWMQTMWYIILPQAFRKVIPPLGNEFISMTKETSLVSVIGFEELTRRGQLI IAKTYGSFEIWLTVAAIYLVMTLSIAQLVSYLERRFATDDRN >gi|290781052|gb|ADGP01000021.1| GENE 152 172778 - 173497 580 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 242 245 228 47 2e-58 MIEIKGLAKKFGRHEVLKNINLTIHDKEVVVIIGPSGSGKSTILRCINHLEEPTAGTIAV DGMIAGDVKSINKMRMEVGMVFQRFNLFPHMTVLRNITLAPMKIRRESKSEAETFALQLL EKVGLVDKKDAYPETLSGGQQQRVAIARALAMKPKFMLFDEPTSALDPEMVREVLDVIKK LAKEGMSMAIVTHEMGFAREVADRVLFIDEGVICEEGTPEAIFSHPQEERTKSFLSKIL Prediction of potential genes in microbial genomes Time: Thu Jul 14 09:59:22 2011 Seq name: gi|290781034|gb|ADGP01000022.1| Megasphaera genomosp. type_1 str. 28L contig00024, whole genome shotgun sequence Length of sequence - 19194 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 10, operones - 3 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 413 611 ## Vpar_1664 S-layer domain protein + Term 443 - 492 8.8 + Prom 672 - 731 7.5 2 2 Tu 1 . + CDS 967 - 5280 5206 ## Acfer_1872 S-layer domain protein + Term 5315 - 5345 4.3 - Term 5303 - 5333 4.3 3 3 Op 1 . - CDS 5350 - 6207 949 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 6232 - 6291 6.7 - Term 6237 - 6279 9.2 4 3 Op 2 . - CDS 6301 - 7125 826 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 7329 - 7388 8.2 5 4 Op 1 34/0.000 + CDS 7770 - 8585 242 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 6 4 Op 2 34/0.000 + CDS 8582 - 9265 910 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 7 4 Op 3 . + CDS 9278 - 10753 187 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 10803 - 10852 16.6 8 5 Op 1 9/0.000 - CDS 11020 - 11751 331 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 9 5 Op 2 35/0.000 - CDS 11735 - 13117 924 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 10 5 Op 3 . - CDS 13114 - 13716 487 ## COG0512 Anthranilate/para-aminobenzoate synthases component II - Prom 13812 - 13871 8.2 + Prom 13674 - 13733 4.4 11 6 Tu 1 . + CDS 13937 - 14206 133 ## gi|290968923|ref|ZP_06560459.1| hypothetical protein HMPREF0889_0442 + Term 14214 - 14260 3.4 + TRNA 14325 - 14398 68.3 # Gly CCC 0 0 + Prom 14325 - 14384 76.8 12 7 Tu 1 . + CDS 14522 - 15688 1619 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 15691 - 15742 20.6 - Term 15677 - 15730 21.0 13 8 Tu 1 . - CDS 15745 - 16257 543 ## COG2606 Uncharacterized conserved protein - Prom 16347 - 16406 7.1 + Prom 16306 - 16365 5.6 14 9 Tu 1 . + CDS 16390 - 17175 919 ## COG0388 Predicted amidohydrolase + Term 17180 - 17223 12.6 - Term 17168 - 17211 12.6 15 10 Tu 1 . - CDS 17257 - 18606 1426 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 18646 - 18705 5.2 + TRNA 18945 - 19020 80.3 # Ala GGC 0 0 Predicted protein(s) >gi|290781034|gb|ADGP01000022.1| GENE 1 3 - 413 611 136 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1664 NR:ns ## KEGG: Vpar_1664 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 17 131 584 695 832 75 44.0 8e-13 DYVRKSDLKIGNNAKDIQKVGARAAALAGLHPLEFDPSTKLSFAVSSGSYDGENSVAFGA FYRPTKNVMLSAASTMGSKNAYTFGMSFKFGKSSATTTTNTPDVQELYRVVGQLQYQVAA QQQEIQQLRQAAKKTK >gi|290781034|gb|ADGP01000022.1| GENE 2 967 - 5280 5206 1437 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1872 NR:ns ## KEGG: Acfer_1872 # Name: not_defined # Def: S-layer domain protein # Organism: A.fermentans # Pathway: not_defined # 1227 1388 540 701 843 71 34.0 3e-10 MKFTKRQLTTMVVAGLMGTAFAGASFAADASSSAADLLAMNQDRTAAPDTEKIKTLEAQI AKVQQEIAEANTWWEKNDGEYYKDNFPDGIDTSGAAPDFIAMYHKYEPIHDKGPDHLKQL QAALEAAKNGGTVPGAPQPGDEGTPSGSGETAPSPADMKRSLSLAQKNVQHLQELTARVN RDVTEAEAAAKADPTDETAKVRAESSKAYAGIVQKAMEAAKQAVTKWQQQLKVEVKDESK PFTMPSPAVETGTDIGQLQQELADLKKQLPDVEKHANWSTAEFNNNGGYANNGASTEVLL RYLQDTQKLSDLQAAIKAKEARISALSSGTGSTPGTGKEETKPHTGEPGSKPVPQPPESK VEPVQPGGGTSQGTVTPETVTQWAKLKAEAEAAEQYYNSEVWAKTYFEEMDKKTPYQNWA KEVEHADGYIANAKAEMEAKKQALESYAKEKGITADPRTKEAQTAALKKRIAALQEVKKN AASIFDETKSDYKWGYYDTFDQAKTNNTLDKRQAYVVALQRKESNVLDTQLQQAEAALKT LDPSGTVTPPPAPPEVKPPSGKTPGVQQSEAEKKYEAAVETWTKAEAARKEKPQDETVRQ QAEKAKQEVEAAKTTYLQELTAKEKELKELYDKAQTKYESEDTDEDGPDQTTIDARNKAK ADYDAIEAKIKQVKGESSSPSETKPTPLPQPPVPTPSVDPAIPKPDPEADKKKSAEELKK EIAALEEQLKQAKKVADTAEEAYNPDDQTPEGQKKLQAYEEAHKKVMQIGDVLHAKKAIL KEKESSSQPPAPKPPESKVDPAQSGSEPGGKTDPQPPESKVDPAQPGSDTQPGTSDVATQ WAKLKAEAEAAEQYYNSEVWAKTYFEEMDKKDPYQNWEKEKAHVDGYIANAKAVMEAKQK ALESYAKEKGITADPRTKEAQEAALKKKIAELKEAKQNAANFDEKNDAYAKDLGHWWTFE DAKQKNKLAERQAYVEALQRKEAGVLDTQLQQAEDALKALNSSGTVTPPPAPNPPQPKVD PGQPGSEPGSKPAPQPPQPKVDPAQPGSEPGGKTDPQPSAQERQQAEADYKTYINTDEPS LKTLVAWEEEETAQAKEQAEKAGASAEDKQYYEYAKQFQERARQQLAAKQKAIGELKAKY GFKDLQPVVPPAEKKKEYTGDNDTKLSAMQKDLEALRATAQQQQQALQKNGTSYGTVGAV LTTAPDKVDMNLRRQYLQAKQTAKTAQQQYKALLADTNTLRKAMHKEELVENLAQPIFTA DGQVNPSVLKGASSGQPVPTPAENAQVQANSRRIADNTAKIAALDKRVTQVAQDVKKVGA RAAALAGLRPVDDGTAKFSLAAATGGYKGENAVAMGLFYRPNKDVLISAGSTIGGDTAYN VGISFKVGTAVVHEKMGTSTPTVQEFYTVVETLQRHIAALEYKVRQMENRQTPERHR >gi|290781034|gb|ADGP01000022.1| GENE 3 5350 - 6207 949 285 aa, chain - ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 13 285 4 276 282 261 46.0 1e-69 MRTTDLFTQKTVFSLEVFPPKRDMPLESIYPTLQELSRLHPDFISVTCGANGQGGNRTAE VAATIKHTYHCETVAHLPCLYLTEDDVRHTLQELKVHGIENILALRGDETPGKTPIRVFE HAADVIRFIKEEDPSFTILGACYPEGHTEAKTLGADIRYLKQKVDAGADELISQLFFDNE LFYRFLERCEIAAINVPIEAGIMPVTNKKQIERMVSLCGATLPVKYQRLLAKYGHSPVAM RDAGIACAVEQIIDLLANGVDGIHVYTMNNPYIAGKIAAAIKNLI >gi|290781034|gb|ADGP01000022.1| GENE 4 6301 - 7125 826 274 aa, chain - ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 31 274 17 260 260 271 57.0 7e-73 MKSFKTFTVLAATALLALGVLVSGCGNQADTATSGQVTVTVGATPVPHEEILNEIKPLLA KEGVNLKIVEFTDYVKPNLSLNDKEIDANFYQHTPYLDKFNAERGTNLKAVAKIHIEPMG IYSHKIKDLKALPTGAKVSIPNDPTNGGRSLLLLQSAGLLTLKNGGSVTSTVGDIAQNPK HLQFVELDAAQVPRSIDDVTIAVINTNFAMPAGLNPLKDALFLEPKDSPYANILVVRAGD EKRPEIQKLVKALQSPTVKTFIQTKYKGAILPSF >gi|290781034|gb|ADGP01000022.1| GENE 5 7770 - 8585 242 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 2 222 12 230 318 97 32 5e-20 MLEMRDVAFSYKNGAHVLERLQLQIHPGEWLALCGRNGSGKTTITRLLMGLEKPTRGRIF YNGTDITAQDPAQRSAFLGYVFQQPERQMFRSTVQEEVAYGPQQAGLEAAAVQAAVAEAL AATGLTALATAYPLNLNRSEKQRVAIASALAMKTKYLILDEPTSGQDRQATRQLMALLQR LNENGLTVILITHDMDVIAAYCSRVIALGPGGICFDGTPESLFTTCEELYELGLRRPDCV RLSLAVPQVGYCKSMKEFTAALCRYAGGKTQ >gi|290781034|gb|ADGP01000022.1| GENE 6 8582 - 9265 910 227 aa, chain + ## HITS:1 COG:MA1419 KEGG:ns NR:ns ## COG: MA1419 COG0619 # Protein_GI_number: 20090279 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Methanosarcina acetivorans str.C2A # 10 191 54 236 268 77 32.0 2e-14 MKQFVPLSKLIGTFAFSFCALVMHTALPLVALVVIELVILSGCGHLRRNGKAVFSLVIFA CFLGVVQYIGGGSLTSAYVTGLRMLSMTIVFIILLTTTRLQDLTAALVTQLHIPYEYAFM FTAALRFVPDFMAESKYVREAQACRGLASRGNAWKKIRQYMSVIQPLLLKSLGRSETMAL SLELRGFGNTQHRFMSRVGLRPRDYVLVAVLFIGCGFVVYLRCHGAV >gi|290781034|gb|ADGP01000022.1| GENE 7 9278 - 10753 187 491 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 233 446 24 229 305 76 26 1e-13 MKRIEDIGKLEFHHRQGGRFRWITVTTLLLAVGTILHLVSPSVGGVTPNWAIATYCVAIC LTKPSYKQGLGIGLVAALINVLTSKSGFPYGNLLSEPVGALTCTFLVHHLGHLQGKKHSL LPALSGFLATFMSGFVFVTILKAVMNLPWVVYVTGMIPLVIVIGLLNAVVTPALFFPALR LFRSRGMLEDVDETAVISDHSEYVLQPSRDGVLVLDHVSYRYNRQRTPVLCDVNLAVHKG DFLVITGGAGSGKSTLCKALTGAVPHYCGGVMKGMVFVNGVATTQSSISALAGTVGYMLD DYDSQLVAMTVEEEIAFTLENYGVAPEKIEKTIDEVLATVQMTGYRKRTLTNLSGGQRQR LVIADVLAMKPEILVFDEPTSALDPEGTKQFYELLHTLNREHGHTIVIVEQNLEAVLPYA DRLVVLDKGRVCCDGSVETTLAYMYEHHIHEAAIPSVFACAMELAAHGIITDGKWLSAET AEQALRQQFSS >gi|290781034|gb|ADGP01000022.1| GENE 8 11020 - 11751 331 243 aa, chain - ## HITS:1 COG:FN1729 KEGG:ns NR:ns ## COG: FN1729 COG0115 # Protein_GI_number: 19705050 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Fusobacterium nucleatum # 1 213 1 216 249 183 42.0 3e-46 MNLYYDDACQFGLAAFETIAVENGTPIWADAHLRRLEKALAFLQIPLPSQVKTAVYQYSR SLPGRQAVKLLISSRNMCFTHRPNPYTKAAYTKGFAAQRATVCRNETSPFVFHKTANYGD SILEKRRARRQGFDEPFFFNTRGQLAEGATTNIFLVKNDRLVTPPVPCGLLPGIVRTYVC RRFPVTEQVVTEQDLPTFTECFVTNSLLGIMGVRTYGSHRFTFPGPYTRRLRAAYEKDKY SPL >gi|290781034|gb|ADGP01000022.1| GENE 9 11735 - 13117 924 460 aa, chain - ## HITS:1 COG:FN1730 KEGG:ns NR:ns ## COG: FN1730 COG0147 # Protein_GI_number: 19705051 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Fusobacterium nucleatum # 25 451 32 452 453 376 46.0 1e-104 MTEPYILPSPFTASAAAIFRLFHDEDKAAFLDSSLHTTQGVYSIIGLVPYLTVETAPDGT LINGTYDARPFETVFYSYLRDHYCENPTDLPLTAGAIGYFSYDYACQRRHIMPYRKSAVI GAAASWTFYDFFIIENCRTGAVTFIANGHTCPAAQLMDTMIRRIKQGLTQPPPLSSPPSV PPELLRYSTKEEYLQALQKVHHYILDGHVYVLNLTQALALKSSCYPYTFFTALRRQNPSP FGAYINYGTWQIISASMERLLSLRRGRIETRPIKGTRPRGCTPAEDQKNSTELKNSSKDK SELLMIVDLERNDLHRICQAGTVTVPALYTLETYATVFHLVSTVQGRIRPSVTMEEVIDA VFPGGSVTGAPKQRAMEIIACLEPTPRGLYTGSLGYISLHRDCDLNIVIRTAVHRNGIYH IGVGGGITAESDNDFEYEETWQKAAALQHALQGGTHEPVL >gi|290781034|gb|ADGP01000022.1| GENE 10 13114 - 13716 487 200 aa, chain - ## HITS:1 COG:RSc2882 KEGG:ns NR:ns ## COG: RSc2882 COG0512 # Protein_GI_number: 17547601 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Ralstonia solanacearum # 1 184 1 184 189 194 50.0 1e-49 MYLIIDNYDSFVYTIAAYLQEAGKSVRVYRCDQISLQEIAALQPQGIILSPGPKHPADAK ESRLIFQTFVGRIPILGICLGMQLIAHMAGAVVSRGAAPMHGKLSRITHTGTGLFFRLPP AFRVTRYHSLVVQKETLPAAYRCDAFSEDGVLMALHHATLPVWGVQFHPEALCTEYGHEL LQNYCNLAEQFTFSETGDLP >gi|290781034|gb|ADGP01000022.1| GENE 11 13937 - 14206 133 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968923|ref|ZP_06560459.1| ## NR: gi|290968923|ref|ZP_06560459.1| hypothetical protein HMPREF0889_0442 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0442 [Megasphaera genomosp. type_1 str. 28L] # 1 89 1 89 89 117 100.0 2e-25 MATEIQTETTRTCSECGQALKPEATYCPMCGKPIDTGHEPQRNMQAKEAAQTMRPATART CPCATAKGKWIIGIIIVLIILCGIYYACR >gi|290781034|gb|ADGP01000022.1| GENE 12 14522 - 15688 1619 388 aa, chain + ## HITS:1 COG:BS_yugJ KEGG:ns NR:ns ## COG: BS_yugJ COG1979 # Protein_GI_number: 16080189 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Bacillus subtilis # 2 388 1 387 387 261 38.0 2e-69 MLGNFTYENPTKLYFGKDALSYLQEELALYGPNVQFIYGGGSIKRNGIYEKIMTVLQAAH KRVIEDGGVMPNPTLDKLYEGCRAAKEQKADLLLAVGGGSVCDYAKAVAVSAYCETDPWD TYYAHMRRIKNKIIPVGCVLTMAGTGSEMNGGSVITNTAEKRKIARVFDARVFPRFAVLN PEFTMTVPKYQMAAGCYDIMSHLMEQYFSGTDDTASDYIAEGMMRSLVHSSRQAIRDPQD YEARSNIMWLASWALNSFIGKGKSQDWMVHMLGQSLGAYTNATHGMTLAAVSLPYYRHIV KAGEAKFARFAQTVWQVRPDGKTAADIAAEGLQCLEAWMRSLGLVLHARELGMTEEMIPQ IAEGVFITHGGYETLTREAVEDILQQSL >gi|290781034|gb|ADGP01000022.1| GENE 13 15745 - 16257 543 170 aa, chain - ## HITS:1 COG:lin0783 KEGG:ns NR:ns ## COG: lin0783 COG2606 # Protein_GI_number: 16799857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 5 160 3 158 158 157 51.0 9e-39 MAKQKKTNVMRMLDSNHIPYDTKSYTYSEEDLSGIHAAAVLGLPPEQVFKTLVGRGKTTG PVVFCIPCHKELDLKKAAAVSHNKSVQLLHVKELLDITGYIRGGCSPIGMKKTFPTYIDA SVRAFDTVSISAGQRGLQVLLSPQDLIPLIRAVVAPLVMDTITLTDGRVR >gi|290781034|gb|ADGP01000022.1| GENE 14 16390 - 17175 919 261 aa, chain + ## HITS:1 COG:BS_ykrU KEGG:ns NR:ns ## COG: BS_ykrU COG0388 # Protein_GI_number: 16078421 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Bacillus subtilis # 3 258 5 259 259 221 41.0 2e-57 MKIAAVQWEIQLGQVAKNYAAADRWVAKAAQDGADIVVLPELWNTAFFPADVAALADKEG IQTRKFLQQAARQYGVYIVGGSVATVRERRLYNTLYVVDRQGQWITQYDKVHLFTRGRED RIFSAGRRPCVWDLDGFRAGAVICYDLRFDEWLRTLTLSGCEILFVPAAWPAARGVHWDL LTRACAVMQQCVVVAVNGCGQSGDISLYGHSAIIDPWGKVLAQGGDEAAVVMAEADIAQV AAVRKKMPVLADRRPEVYVRG >gi|290781034|gb|ADGP01000022.1| GENE 15 17257 - 18606 1426 449 aa, chain - ## HITS:1 COG:HI0189 KEGG:ns NR:ns ## COG: HI0189 COG0334 # Protein_GI_number: 16272153 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Haemophilus influenzae # 5 449 7 449 449 474 53.0 1e-133 MNSYVERVIADVRQKYSHEPEFVQTVEEVYSSISPVVDRHPEYEKFDLLARLVEPERQFT FRVVWQDDQGKYHTNTGYRVQFNGAIGPYKGGLRFQKNVYPGIMKFLGFEQIFKNALTGL PIGGAKGGSDFDPTGKSDTEIMRFCQSFMQALYRYIGPDIDVPAGDMGVGGREIGYLYGE YRRLKGTFENGVLTGKGFSYGGSLIRPEATGYGAIYYLENVLKDDGQELRGKTIAAAGFG NVAWGLCKKAAELGAKVVTLSGPDGYIYDPDGVCTEEKINFLLNMRESGRNRVQDYADAF GVEFFAGEKPWNRKVDIAMPSAMQNDVHLEQAKQIAANNVRYYIEVANMPTTNEALNYLL QQKNMIVAPAKAVNAGGVAVSALEMSQNSERLVWTATEVDTRLRQIMDTIYRNSKDAAMR NGFGYNLVAGANIAGFERIADAMLAQGVF Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:00:40 2011 Seq name: gi|290780885|gb|ADGP01000023.1| Megasphaera genomosp. type_1 str. 28L contig00040, whole genome shotgun sequence Length of sequence - 155658 bp Number of predicted genes - 147, with homology - 142 Number of transcription units - 55, operones - 29 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 23 - 99 81.5 # Pro GGG 0 0 1 1 Tu 1 . + CDS 530 - 727 173 ## gi|290968930|ref|ZP_06560465.1| hypothetical protein HMPREF0889_1153 + Term 735 - 769 2.7 + Prom 738 - 797 1.9 2 2 Tu 1 . + CDS 849 - 1202 142 ## HTH_0879 hypothetical protein 3 3 Tu 1 . + CDS 1351 - 1830 178 ## gi|291531521|emb|CBK97106.1| hypothetical protein EUS_20870 + Term 1833 - 1891 4.5 4 4 Op 1 . + CDS 2396 - 2557 95 ## 5 4 Op 2 . + CDS 2515 - 2880 432 ## gi|290968932|ref|ZP_06560467.1| conserved domain protein 6 4 Op 3 . + CDS 2855 - 3139 207 ## EUBREC_1280 hypothetical protein + Prom 3193 - 3252 5.4 7 5 Op 1 . + CDS 3280 - 6771 3969 ## COG0587 DNA polymerase III, alpha subunit + Prom 6863 - 6922 4.8 8 5 Op 2 . + CDS 6978 - 7538 551 ## gi|290968935|ref|ZP_06560470.1| hypothetical protein HMPREF0889_1158 + Term 7555 - 7596 12.2 - Term 7543 - 7583 9.5 9 6 Op 1 . - CDS 7602 - 9119 1903 ## COG1620 L-lactate permease - Prom 9226 - 9285 6.8 - Term 9199 - 9239 -0.5 10 6 Op 2 . - CDS 9359 - 9994 445 ## Cbei_2882 hypothetical protein - Prom 10035 - 10094 8.5 11 7 Tu 1 . - CDS 10167 - 10934 607 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 11074 - 11133 6.6 + Prom 10906 - 10965 10.0 12 8 Op 1 16/0.000 + CDS 11111 - 12340 1700 ## COG0137 Argininosuccinate synthase 13 8 Op 2 . + CDS 12362 - 13798 1565 ## COG0165 Argininosuccinate lyase + Prom 13861 - 13920 7.8 14 9 Op 1 4/0.000 + CDS 13966 - 14805 1248 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 15 9 Op 2 25/0.000 + CDS 14820 - 15263 644 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Prom 15357 - 15416 6.5 16 9 Op 3 5/0.000 + CDS 15461 - 16270 837 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase + Term 16284 - 16322 4.1 + Prom 16301 - 16360 4.7 17 9 Op 4 5/0.000 + CDS 16387 - 17202 1062 ## COG3494 Uncharacterized protein conserved in bacteria 18 9 Op 5 1/0.000 + CDS 17220 - 18353 1112 ## COG0763 Lipid A disaccharide synthetase 19 9 Op 6 . + CDS 18350 - 20104 253 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 20 9 Op 7 3/0.000 + CDS 20117 - 21427 1092 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 21 9 Op 8 1/0.000 + CDS 21411 - 22544 1003 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 22 9 Op 9 . + CDS 22541 - 23278 685 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 23 9 Op 10 . + CDS 23282 - 24127 1084 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 24 9 Op 11 13/0.000 + CDS 24145 - 25116 1137 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 25 9 Op 12 . + CDS 25116 - 25649 553 ## COG1778 Low specificity phosphatase (HAD superfamily) 26 9 Op 13 . + CDS 25668 - 26600 964 ## COG1560 Lauroyl/myristoyl acyltransferase 27 9 Op 14 . + CDS 26581 - 27132 480 ## gi|290968954|ref|ZP_06560489.1| conserved hypothetical protein 28 9 Op 15 . + CDS 27135 - 27863 673 ## Vpar_0548 OstA family protein 29 9 Op 16 1/0.000 + CDS 27881 - 28600 192 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 30 9 Op 17 . + CDS 28617 - 29705 1153 ## COG0795 Predicted permeases + Term 29710 - 29742 1.2 + Prom 29717 - 29776 3.2 31 10 Op 1 . + CDS 29798 - 31081 1741 ## COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain 32 10 Op 2 . + CDS 31091 - 31507 472 ## Vpar_0552 hypothetical protein 33 10 Op 3 . + CDS 31507 - 32364 1234 ## COG1284 Uncharacterized conserved protein + Prom 32373 - 32432 7.8 34 11 Tu 1 . + CDS 32481 - 32717 419 ## COG4443 Uncharacterized protein conserved in bacteria + Term 32747 - 32793 8.5 + Prom 32763 - 32822 4.7 35 12 Op 1 4/0.000 + CDS 32865 - 33407 707 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 36 12 Op 2 16/0.000 + CDS 33423 - 34451 1245 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 37 12 Op 3 14/0.000 + CDS 34435 - 35436 974 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 38 12 Op 4 26/0.000 + CDS 35454 - 36395 938 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 39 12 Op 5 22/0.000 + CDS 36397 - 37140 270 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 40 12 Op 6 4/0.000 + CDS 37185 - 37430 343 ## COG0236 Acyl carrier protein + Term 37445 - 37489 8.4 41 12 Op 7 . + CDS 37501 - 38460 909 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 42 12 Op 8 1/0.000 + CDS 38478 - 39743 1360 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 43 12 Op 9 3/0.000 + CDS 39751 - 40461 796 ## COG0571 dsRNA-specific ribonuclease + Term 40463 - 40495 2.4 44 12 Op 10 . + CDS 40504 - 41580 840 ## COG1243 Histone acetyltransferase 45 12 Op 11 . + CDS 41573 - 42328 813 ## COG3279 Response regulator of the LytR/AlgR family + Term 42330 - 42372 10.4 + Prom 42394 - 42453 4.4 46 13 Tu 1 . + CDS 42482 - 43888 1299 ## COG0535 Predicted Fe-S oxidoreductases + Term 43997 - 44061 16.1 + Prom 44058 - 44117 6.6 47 14 Tu 1 . + CDS 44192 - 45571 1544 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase + Term 45576 - 45602 -0.6 + Prom 45588 - 45647 5.2 48 15 Op 1 . + CDS 45710 - 46522 917 ## COG0566 rRNA methylases 49 15 Op 2 . + CDS 46531 - 47451 725 ## COG1039 Ribonuclease HIII 50 15 Op 3 . + CDS 47459 - 48307 819 ## COG3394 Uncharacterized protein conserved in bacteria 51 15 Op 4 . + CDS 48320 - 49249 1019 ## COG0451 Nucleoside-diphosphate-sugar epimerases 52 15 Op 5 . + CDS 49246 - 49695 753 ## COG4492 ACT domain-containing protein 53 15 Op 6 13/0.000 + CDS 49715 - 51001 1762 ## COG0460 Homoserine dehydrogenase 54 15 Op 7 . + CDS 51005 - 51928 996 ## COG0083 Homoserine kinase + Term 52017 - 52070 7.9 + Prom 52019 - 52078 6.4 55 16 Tu 1 . + CDS 52107 - 52862 884 ## COG0274 Deoxyribose-phosphate aldolase + Term 52864 - 52910 2.1 + Prom 52867 - 52926 7.2 56 17 Op 1 . + CDS 52954 - 53610 656 ## COG0274 Deoxyribose-phosphate aldolase 57 17 Op 2 3/0.000 + CDS 53600 - 54541 784 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 58 17 Op 3 1/0.000 + CDS 54561 - 55670 1329 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 59 17 Op 4 . + CDS 55745 - 56146 522 ## COG1576 Uncharacterized conserved protein + Prom 56150 - 56209 2.3 60 17 Op 5 . + CDS 56252 - 56722 609 ## COG0517 FOG: CBS domain + Term 56743 - 56789 9.4 + Prom 56832 - 56891 9.2 61 18 Op 1 2/0.000 + CDS 56938 - 57501 780 ## COG0450 Peroxiredoxin 62 18 Op 2 . + CDS 57513 - 59165 1617 ## COG0492 Thioredoxin reductase + Term 59193 - 59239 7.1 + Prom 59326 - 59385 11.3 63 19 Tu 1 . + CDS 59608 - 60519 388 ## COG4936 Predicted sensor domain + Term 60526 - 60574 9.7 + Prom 60622 - 60681 10.8 64 20 Op 1 11/0.000 + CDS 60796 - 63387 2436 ## COG1882 Pyruvate-formate lyase 65 20 Op 2 . + CDS 63426 - 64367 740 ## COG1180 Pyruvate-formate lyase-activating enzyme 66 20 Op 3 4/0.000 + CDS 64378 - 65190 836 ## COG4816 Ethanolamine utilization protein 67 20 Op 4 . + CDS 65218 - 65496 504 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 68 20 Op 5 . + CDS 65511 - 66227 590 ## Cbei_4057 hypothetical protein 69 20 Op 6 . + CDS 66233 - 66517 431 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 70 20 Op 7 . + CDS 66535 - 66732 180 ## gi|290968998|ref|ZP_06560533.1| hypothetical protein HMPREF0889_1221 71 20 Op 8 . + CDS 66772 - 67032 351 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 72 20 Op 9 4/0.000 + CDS 67089 - 67931 554 ## COG4820 Ethanolamine utilization protein, possible chaperonin 73 20 Op 10 6/0.000 + CDS 67909 - 69333 834 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 74 20 Op 11 . + CDS 69349 - 70473 1039 ## COG1454 Alcohol dehydrogenase, class IV + Term 70536 - 70580 12.1 - TRNA 70592 - 70668 82.8 # Val GAC 0 0 - Term 70523 - 70567 12.1 75 21 Tu 1 . - CDS 70758 - 73367 1733 ## COG0210 Superfamily I DNA and RNA helicases - Prom 73400 - 73459 4.7 + Prom 73340 - 73399 5.2 76 22 Op 1 2/0.000 + CDS 73539 - 74735 1068 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 77 22 Op 2 3/0.000 + CDS 74698 - 75642 1133 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 78 22 Op 3 10/0.000 + CDS 75639 - 76838 734 ## COG1459 Type II secretory pathway, component PulF 79 22 Op 4 . + CDS 76867 - 77262 400 ## COG2165 Type II secretory pathway, pseudopilin PulG 80 22 Op 5 . + CDS 77285 - 77629 139 ## 81 22 Op 6 . + CDS 77666 - 78154 467 ## gi|290969010|ref|ZP_06560545.1| hypothetical protein HMPREF0889_1234 82 22 Op 7 . + CDS 78147 - 78503 383 ## gi|290969011|ref|ZP_06560546.1| hypothetical protein HMPREF0889_1235 83 22 Op 8 . + CDS 78448 - 79002 559 ## gi|290969012|ref|ZP_06560547.1| hypothetical protein HMPREF0889_1236 84 22 Op 9 . + CDS 79024 - 79467 333 ## gi|290969013|ref|ZP_06560548.1| hypothetical protein HMPREF0889_1237 85 22 Op 10 . + CDS 79486 - 80250 756 ## gi|290969014|ref|ZP_06560549.1| hypothetical protein HMPREF0889_1238 86 22 Op 11 . + CDS 80265 - 80846 593 ## gi|290969015|ref|ZP_06560550.1| hypothetical protein HMPREF0889_1239 87 22 Op 12 . + CDS 80788 - 81258 499 ## gi|290969016|ref|ZP_06560551.1| hypothetical protein HMPREF0889_1240 + Term 81270 - 81324 19.0 + Prom 81339 - 81398 6.1 88 23 Op 1 30/0.000 + CDS 81496 - 82107 812 ## COG0811 Biopolymer transport proteins 89 23 Op 2 . + CDS 82119 - 82523 604 ## COG0848 Biopolymer transport protein 90 23 Op 3 . + CDS 82531 - 83322 869 ## Selsp_1719 TonB family protein + Prom 83365 - 83424 2.5 91 24 Op 1 1/0.000 + CDS 83467 - 83985 622 ## COG0716 Flavodoxins 92 24 Op 2 . + CDS 83998 - 85677 2068 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 85707 - 85746 10.0 + Prom 85918 - 85977 8.5 93 25 Tu 1 . + CDS 86056 - 87393 1782 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 87403 - 87447 11.6 + Prom 87802 - 87861 6.5 94 26 Op 1 1/0.000 + CDS 87901 - 88911 1265 ## COG0059 Ketol-acid reductoisomerase + Term 88934 - 88985 3.5 + Prom 88921 - 88980 2.0 95 26 Op 2 32/0.000 + CDS 89000 - 90700 1716 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 96 26 Op 3 . + CDS 90697 - 91197 689 ## COG0440 Acetolactate synthase, small (regulatory) subunit 97 26 Op 4 . + CDS 91218 - 92870 2159 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 92942 - 92979 -0.0 98 27 Op 1 8/0.000 + CDS 93262 - 95922 2778 ## COG0525 Valyl-tRNA synthetase 99 27 Op 2 . + CDS 95935 - 97239 1443 ## COG0285 Folylpolyglutamate synthase + Term 97249 - 97286 7.3 + Prom 97292 - 97351 7.2 100 28 Tu 1 . + CDS 97448 - 97798 458 ## gi|290969032|ref|ZP_06560567.1| hypothetical protein HMPREF0889_1259 + Prom 97815 - 97874 4.4 101 29 Op 1 . + CDS 97939 - 99204 1227 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 102 29 Op 2 . + CDS 99287 - 99949 1059 ## COG2344 AT-rich DNA-binding protein + Prom 99955 - 100014 7.6 103 30 Op 1 59/0.000 + CDS 100089 - 100529 534 ## PROTEIN SUPPORTED gi|238926959|ref|ZP_04658719.1| ribosomal protein L13 104 30 Op 2 . + CDS 100548 - 100943 512 ## PROTEIN SUPPORTED gi|238926960|ref|ZP_04658720.1| ribosomal protein S9 + Term 100956 - 101005 11.8 + Prom 101039 - 101098 4.9 105 31 Tu 1 . + CDS 101154 - 102689 1752 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 102829 - 102863 3.5 + Prom 102946 - 103005 11.6 106 32 Op 1 . + CDS 103198 - 105366 1161 ## COG0338 Site-specific DNA methylase 107 32 Op 2 . + CDS 105367 - 107349 684 ## SOR_0978 AlwI restriction endonuclease family protein 108 32 Op 3 . + CDS 107373 - 108140 305 ## SGO_0555 hypothetical protein + Prom 108646 - 108705 5.5 109 33 Op 1 . + CDS 108736 - 110598 618 ## SGO_0556 DNA helicase-like protein, putative 110 33 Op 2 . + CDS 110585 - 110743 110 ## + Prom 110768 - 110827 3.5 111 34 Tu 1 . + CDS 110859 - 111125 148 ## CPR_0648 IS1470, transposase + Term 111172 - 111212 -0.2 + Prom 111144 - 111203 3.8 112 35 Tu 1 . + CDS 111233 - 111892 293 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase + Prom 111932 - 111991 5.3 113 36 Op 1 . + CDS 112015 - 112893 731 ## gi|290969045|ref|ZP_06560580.1| hypothetical protein HMPREF0889_1271 114 36 Op 2 . + CDS 112896 - 114524 834 ## COG0464 ATPases of the AAA+ class 115 37 Tu 1 . + CDS 114622 - 116139 1313 ## Alvin_1447 hypothetical protein + Term 116273 - 116321 -0.6 + Prom 116156 - 116215 3.5 116 38 Tu 1 . + CDS 116337 - 116675 255 ## gi|290969048|ref|ZP_06560583.1| hypothetical protein HMPREF0889_1274 + Prom 116914 - 116973 3.3 117 39 Tu 1 . + CDS 117001 - 117465 394 ## gi|290969049|ref|ZP_06560584.1| hypothetical protein HMPREF0889_1275 118 40 Tu 1 . - CDS 118095 - 118349 142 ## - Prom 118404 - 118463 7.0 + Prom 118018 - 118077 8.0 119 41 Op 1 . + CDS 118304 - 118414 59 ## + Prom 118425 - 118484 1.7 120 41 Op 2 . + CDS 118512 - 119513 918 ## COG0270 Site-specific DNA methylase + Prom 119647 - 119706 7.9 121 42 Tu 1 . + CDS 119787 - 120668 489 ## COG4823 Abortive infection bacteriophage resistance protein + TRNA 121473 - 121549 78.6 # Arg ACG 0 0 122 43 Tu 1 . - CDS 121868 - 122341 514 ## COG0590 Cytosine/adenosine deaminases - Prom 122377 - 122436 9.8 + Prom 122375 - 122434 9.4 123 44 Op 1 . + CDS 122460 - 123134 863 ## COG2860 Predicted membrane protein 124 44 Op 2 . + CDS 123158 - 124990 2208 ## Vpar_0419 hypothetical protein + Prom 125048 - 125107 7.2 125 45 Op 1 9/0.000 + CDS 125155 - 125334 286 ## PROTEIN SUPPORTED gi|227371279|ref|ZP_03854763.1| SSU ribosomal protein S21P 126 45 Op 2 . + CDS 125267 - 125806 294 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 + Term 125895 - 125942 10.1 + Prom 125821 - 125880 5.5 127 46 Tu 1 . + CDS 125955 - 127856 2215 ## COG0174 Glutamine synthetase 128 47 Op 1 . + CDS 127969 - 128127 56 ## gi|290969057|ref|ZP_06560592.1| hypothetical protein HMPREF0889_1284 129 47 Op 2 3/0.000 + CDS 128124 - 129800 1686 ## COG2759 Formyltetrahydrofolate synthetase 130 47 Op 3 . + CDS 129800 - 130423 608 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase + Term 130508 - 130551 2.3 + Prom 130628 - 130687 5.8 131 48 Op 1 . + CDS 130790 - 131035 323 ## HMPREF0421_21314 hypothetical protein 132 48 Op 2 2/0.000 + CDS 131028 - 132611 1097 ## COG0286 Type I restriction-modification system methyltransferase subunit 133 48 Op 3 1/0.000 + CDS 132608 - 133600 662 ## COG3943 Virulence protein 134 48 Op 4 11/0.000 + CDS 133597 - 135474 379 ## COG0732 Restriction endonuclease S subunits 135 48 Op 5 . + CDS 135494 - 138793 2023 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 138832 - 138880 11.4 - Term 138816 - 138872 20.1 136 49 Op 1 . - CDS 138965 - 140071 1321 ## COG0012 Predicted GTPase, probable translation factor 137 49 Op 2 . - CDS 140085 - 141326 1281 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 141359 - 141418 4.6 138 50 Op 1 36/0.000 - CDS 141473 - 142690 421 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 139 50 Op 2 24/0.000 - CDS 142680 - 143387 314 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 140 50 Op 3 . - CDS 143397 - 144497 1261 ## COG0845 Membrane-fusion protein - Prom 144522 - 144581 4.8 + Prom 144424 - 144483 6.1 141 51 Tu 1 . + CDS 144624 - 145892 1586 ## COG1457 Purine-cytosine permease and related proteins + Term 145910 - 145956 16.1 - Term 145898 - 145944 16.1 142 52 Tu 1 . - CDS 145950 - 148052 2323 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 148135 - 148194 6.1 + Prom 148094 - 148153 6.4 143 53 Op 1 1/0.000 + CDS 148342 - 150711 2674 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 150721 - 150761 8.7 144 53 Op 2 4/0.000 + CDS 150804 - 151448 662 ## COG0517 FOG: CBS domain 145 53 Op 3 . + CDS 151450 - 152271 918 ## COG1806 Uncharacterized protein conserved in bacteria + Term 152463 - 152500 -0.4 146 54 Tu 1 . + CDS 152598 - 154505 2010 ## COG0441 Threonyl-tRNA synthetase + Term 154535 - 154576 8.1 + Prom 154882 - 154941 2.8 147 55 Tu 1 . + CDS 155059 - 155656 663 ## LM5578_2512 hypothetical protein Predicted protein(s) >gi|290780885|gb|ADGP01000023.1| GENE 1 530 - 727 173 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968930|ref|ZP_06560465.1| ## NR: gi|290968930|ref|ZP_06560465.1| hypothetical protein HMPREF0889_1153 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1153 [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 112 100.0 7e-24 MTDTKSNGWGGVRPGAGRPKGTTKPEGVRRQHQVRAYDDEWAIIKAFASIVKKDPERAIR MMKTE >gi|290780885|gb|ADGP01000023.1| GENE 2 849 - 1202 142 117 aa, chain + ## HITS:1 COG:no KEGG:HTH_0879 NR:ns ## KEGG: HTH_0879 # Name: not_defined # Def: hypothetical protein # Organism: H.thermophilus # Pathway: not_defined # 5 93 233 320 378 93 44.0 2e-18 MYVAVQEKSRYVAERIARTESARAWADGFIARYENDDTVAAYRWEVSSAHPCTDVCDMYA NADLWGLGKGIYPKDQCPTLPAHPHCLCYLSPIYEGEIDLNEQQDLREEGGNHWLQK >gi|290780885|gb|ADGP01000023.1| GENE 3 1351 - 1830 178 159 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291531521|emb|CBK97106.1| ## NR: gi|291531521|emb|CBK97106.1| hypothetical protein EUS_20870 [Eubacterium siraeum 70/3] # 6 159 52 205 205 117 36.0 3e-25 MENGKTFSRSVKDITDKYTNKNKPSTGKLVYDKDYDVNKNVEEVEIAKWIHENIGGNIKL LTAVNEQNKKTADYLWNGKLWDLKSITTEKSADSSIRKGVKQIADNPGGIILLFNGEKLD INLLKDKIIYRIRRSMSSGMEVLVLHDMKIVLALRYGEI >gi|290780885|gb|ADGP01000023.1| GENE 4 2396 - 2557 95 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTYDRKEPREMNRRERKLVRKVLAAYHRPKHIKKRGEIKKWLYYMKNFPLGKT >gi|290780885|gb|ADGP01000023.1| GENE 5 2515 - 2880 432 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968932|ref|ZP_06560467.1| ## NR: gi|290968932|ref|ZP_06560467.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 121 1 121 121 215 100.0 9e-55 MVVLYEEFPTWEDLIKDILEEDGYDPFERLPGFPENVYWVLDNQFTTDKHGKKIDDWIFL KYTIKKNPETNNTYEKYTTLPGYPTLEEALEAKLFDGESIHDLYNRGYDWLMSDESLEYD K >gi|290780885|gb|ADGP01000023.1| GENE 6 2855 - 3139 207 94 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1280 NR:ns ## KEGG: EUBREC_1280 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 6 90 1 83 210 66 42.0 3e-10 MNLWNMTNDRRTYLNLQYGRFHGVGKYDIPELKRQTIKLPEKWIGFNEVNTYKGECTQTG VHFFLDDYQFERIWNRPTVYVKQLSKFSLVAYTL >gi|290780885|gb|ADGP01000023.1| GENE 7 3280 - 6771 3969 1163 aa, chain + ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 2 1141 9 1145 1167 933 43.0 0 MKPFVHLHVHTQYSLFDGLCRIPEMVQMAKAMNMPAIAVTDHGNMYGAVHLYKEAKAQGI KPILGCEIYMTRGSRFEKKTRERLCHLILLAKNTQGYHNLVKIVSKGYVDGVNNYHKPRV DYELLEQYHEGIIALSACIEGHIQQDILNHDEAAAIKTLQRLTGIFGKDDFYLEVQNHGI PEEKIVRRVFKEWSQQFGIRLVATNDYHYLKKNDAPAQEVKLCISTGSTLNNPDHFKFFN DSFYMKSYEEMAELFPDMPEALATTLEIAEKCNVELKFDERHVPSFPVPSGETDASYLRK LCEQSLPEKYPTVTETVRKRVDYELDIIAQMGFPSYFLIVWDYVKFARDHHIPVGPGRGS AAGSVVAYLLGITGLDPLKYDLLFERFLNPERVTMPDIDMDFCYENRSKIIDYVTRKYGK DHVSQIITFGTLAAKAVLRDVGRVLEIPLSEVNRIVKMVPNELGMTLDKALEQSRELRET VAKDPQIQRWMALGKALEGLVRHASTHAAGIVISAAPIDDYIPLQYSKEGYLTTQYDKEL VEELGLLKMDFLGLRTLTVIGDTIKLIKENHGTDIDPDHIPLDDEATCRMLTMGDTAGVF QMESDGITALVKELAPKHFEDMIPLVALYRPGPLGSGMVEDFIKRSHGETAVTYLHPLLE PILRDTYGVILYQEQVMQIASSMGGFTLGQADLLRRAMGKKKESILKAQRDLFLAGTRAN GIEDEVAHKVFDLMVYFAGYGFNKSHSAAYAYVAWQTAYLKAHYRAELMAATMTSMINDV AKISYYISECRRHGIAVLSPDVNTSVSTFSVENGRIRFGLSGVKNVGENVIAVILQERQE GGPFTSLSDFCSRVNYHVVNRRVIESLIRCGAMDSFGKYRSQLIQVLDRAMALGASKQKD RDTGQMGLFDEDDTEEALFDLSYPEIEEFSIEERLAMEKEYDGFYFSGHPLNKYKEQMAA LTPLSALYGEHARQYDGKEIYCGGLISTQRRVTTKRKDLMAILTLEDYTQTVTAVVFPKT YAACAGVLVDDMAVAVRGTADISEDRVQIIVNEIVPLAQQERLRHGRLQADTHGRTVGTS GKPWSPGQGEKLFIKIPAHLEQTNLSVRIGELLCRYPGSVKVYFYLAGSRKTILAAEKYW VAPNEALRRELEKLLDASSVVLQ >gi|290780885|gb|ADGP01000023.1| GENE 8 6978 - 7538 551 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968935|ref|ZP_06560470.1| ## NR: gi|290968935|ref|ZP_06560470.1| hypothetical protein HMPREF0889_1158 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1158 [Megasphaera genomosp. type_1 str. 28L] # 1 186 1 186 186 370 100.0 1e-101 MSIKQWAIIAGGLVVVLGSMAGYSGIQQVQCEAPPALPVQPLTYGKGTAEQQFCVYHSSG GLYSFAYPREFTQTSEPVNGDGIVLKAVAGTAVLRSCGMLTSENWVEAYNEAKGKIHGKI IQTKLGDHSFVIWWQDGEIQRYYKAVYTGNYMAALYFYCDRREMPYYYSLLTHVVDSLQV NGTLYP >gi|290780885|gb|ADGP01000023.1| GENE 9 7602 - 9119 1903 505 aa, chain - ## HITS:1 COG:BB0604 KEGG:ns NR:ns ## COG: BB0604 COG1620 # Protein_GI_number: 15594949 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Borrelia burgdorferi # 2 500 5 499 500 312 41.0 8e-85 MNFILALSPILWLIISLGFLKMQSYKACPIALIISFAVALGIHHMNVPDAVTAALEGVAL ACWPILLVIIAAIFTYNLTTYNKSMDIIKHMLTAVSKDRRVLVLLIGWGFGAFMEGMAGF GTAIAIPASMLVALGFNPVKAILACLIANSVPTTFGSIGIPASTLANITGLDPIHLATYI SLQLLPLNIICPLLMIIISEGSIKALKGVFLLTVLSGLALAIPELIIAAFAGPELAAMGS SIVILAFIVIYSKVRPVNNPQYAMAIEPAHVPLRGGFIACLPFILIFLFLLFTSKLVPAI NIPLNTIRTAVQIYTGQGGTPYTFVWIATPGILIFLAAIISGKIQSSGFGEMFCVFKSTV IGLRNTIITIIAVIATAKVMGYSGMTSEIARTAVDATGIMYPFIAPLIGSVGTFITGSGT SSNVLFGNLQTDAAVAISADKTWLAAANSAGTCAGKMISPQSIAIAVGAIALKGKDSEIL KEIVKVYVPFIILLGCIVYFGQTCI >gi|290780885|gb|ADGP01000023.1| GENE 10 9359 - 9994 445 211 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2882 NR:ns ## KEGG: Cbei_2882 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 9 211 11 215 215 234 53.0 2e-60 MSASMQTLFQKQAPLLIKNFQSHGFAAFYCPTAAAAVQQTLQLIPPDHRLSWGGSATLTE LGLPDLLRRTYVTLDREQAATPAARQECMRQALLCDTYLMSTNAATVDGELYNIDGNGNR LAALLYGPKQVIILAGMNKVVPDLAAAEKRARTVAAPLNMQRFQNRTPCRQTGFCSNCNT ADSICNQFVYTRRSQPAGRIKIIFVGESLGF >gi|290780885|gb|ADGP01000023.1| GENE 11 10167 - 10934 607 255 aa, chain - ## HITS:1 COG:ECs4238 KEGG:ns NR:ns ## COG: ECs4238 COG5009 # Protein_GI_number: 15833492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Escherichia coli O157:H7 # 4 249 10 263 858 171 40.0 1e-42 MKKKLVLIFFLAFTCCALGTQINDVLHENTLPVRSSALRTDLFTALPSQTYPYLHLPAAI EAKKKNIPVYVSLAVIPPNLRHAVLATEDKRFYTHGAVDPFGILRAAVVNAAAAHTREGG STISQQVVKNLFLTQDRTYTRKGKELLLALLLEHYYTKDQILELYLNTVYFGPDAIGVHA AARTFFHTAPEQLTLSQCALLAGLVKAPTYYNPLLHYREAKERQKIVLTLLTEQQYIRPE TATQAYYAPLRLQKK >gi|290780885|gb|ADGP01000023.1| GENE 12 11111 - 12340 1700 409 aa, chain + ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 5 406 3 400 400 447 54.0 1e-125 MKKIKKIVLAYSGGLDTSVIIPWLKENYAGAEVIAVCADVGQPDDFAAIEKKAYASGADK VYVADIKKEFMEAYVWPTIQAGAVYEGKYLLGTSFARPLISKKLVEIAQAEGADAIAHGA TGKGNDQVRFELTVKALAPTMTLIAPWRMWNLKSREDELKYAAAHGVPIDYQSEENPYPY SMDWNIWHLSHEGDDLEDPAKAPEDMVYMVSKTPEQAPDTPEYVTIDFVGGIPVAVNGTA LDAVSLITALNEVGARNGIGIVDIVENRLVGMKSRGIYENPGGAILMYAHRELEYLCLDR DTFHYKEKMAHTFAELVYDGKWFSPLREALSAFVEKTQETVTGQIKLKLYKGNIISAGST SPYSLYNEEYVTFGEDEVYNQVDAEGFINLFGLPLKMRALAMLKAQNKK >gi|290780885|gb|ADGP01000023.1| GENE 13 12362 - 13798 1565 478 aa, chain + ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 2 455 3 456 458 491 53.0 1e-138 MKLWGGRFTKATDKSVEEFNASIQFDCRMYAEDICGSIAHAAMLVKQQVISPEDGKRIIQ GLTSIYQQIEEGKFTFSVALEDIHMNIEQRLTETIGEAGKRLHTGRSRNDQVALDTHLYV RREIAAIAALLLQLQTALVTAAEQYTDIIMPGYTHLQRAQPVLFSHHLMAYFSMFARDFK HLEYTWELADTMPLGAGALAGTTYPLDVEMVARTLRFGKVYENSMDAVSDRDYIIAFLEF AAQVMMHLSRLSEEFILWSSAEFHFIELDDAHCTGSSIMPQKKNPDICELVRGKTGRFYG HLVALLTVMKGLPLAYDKDMQEDKEGLFDAIDNLKFALSIYKEMISHMTVHKEHMRKALA NDFSNATDMADYLVKKGVPFREAHAIVGKAVRYCLDHQCVLTQLSLAEFTALSPHFEKDI LAALQIETCVAQRQTYNGTSPQSVRRQCRQGRQSLQQAQQRQRQWQEITDAVYGVLKQ >gi|290780885|gb|ADGP01000023.1| GENE 14 13966 - 14805 1248 279 aa, chain + ## HITS:1 COG:PA4406 KEGG:ns NR:ns ## COG: PA4406 COG0774 # Protein_GI_number: 15599602 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Pseudomonas aeruginosa # 4 278 2 280 303 210 41.0 3e-54 MVTLKQTTLVQPVSYQGIGLHAALEVHMVLRPAPADTGIVFVRTDLPGRPSVQAHLSHVT NTMRATTLEAGAAKVFTVEHILSALSGLQIDNCTVEMDSPEPPVGDGSSLEFVRLIETAG VQVLDAPRREWIIKEQHLIQEEDKFVAVVPYDGYRITFTSINPHPLLGIQFLDTEITKET YVQKIAFARTIAFTGELEMLRQLGLGKGGTLENAVVYDETTCLSKVRTDDELVRHKVLDM IGDLALLGRPIRGHVIAVKSGHKLNNLLTHHIIKEFNAN >gi|290780885|gb|ADGP01000023.1| GENE 15 14820 - 15263 644 147 aa, chain + ## HITS:1 COG:BH3735 KEGG:ns NR:ns ## COG: BH3735 COG0764 # Protein_GI_number: 15616297 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Bacillus halodurans # 2 141 1 140 140 145 49.0 2e-35 MILEVTDIMEILPHRYPMLLVDRIIELDPMKYAIGVKNATFNEAFFQGHFPGQPVMPGVL LAEAMAQVGGVALLYPEENRGLIPYFTGIDKMRFRHPVRPGDQAIMRADVVKIKRSMGKV KAQCHVGEMLCAEGEYMFALQPGQATK >gi|290780885|gb|ADGP01000023.1| GENE 16 15461 - 16270 837 269 aa, chain + ## HITS:1 COG:sll0379 KEGG:ns NR:ns ## COG: sll0379 COG1043 # Protein_GI_number: 16331593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Synechocystis # 12 259 35 281 295 228 47.0 7e-60 MTEDKENRPCLVHPTAIIDPQASLGAGVTVGPYAVIGPHVEVGDGTEIMAHVVLDGWTKI GKECRFFPFSSIGSEPQDLKFHGEKSYVCIGARSVFRESVTVSRATGEGEETRIGNDCLF QANTHIAHNCIVGNNVIMSNCAGLAGHVVVEDRVVIGGMAGIHQFVKVGRNCMIGGLAKV VQDIPPFVIVDGQPARCIGLNSVGLSRAGIPEAVRSDLKKAFRLLYRSGLNLRQAIAAME QELDSSEEVEHFLRFLRNAERGICRGTKE >gi|290780885|gb|ADGP01000023.1| GENE 17 16387 - 17202 1062 271 aa, chain + ## HITS:1 COG:FN0596 KEGG:ns NR:ns ## COG: FN0596 COG3494 # Protein_GI_number: 19703931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 264 1 262 267 167 32.0 2e-41 MEKVGLFAGVGRLPVEFVRAAKTSGHETVVIALVPGTDPELAEAADVYYEINVAKLDKVI KTMRRAGVTKVTMIGKVTKELLFKGLSFPDFRAMKLLATLHNRKDDTIMLAIVEELAKDG LEVADQTEYLKALMPSCGVLTRRQPSEAEWQDIRFGAATAKAMGKLDIGQTVVVKRQAVM AVEAIEGTDACIRRGGTLAQGDGVVVKVAKPKQDWRFDMPTVGKATVEAMVASGCTVLAM EADKTLFVEQEEVLALAAKHKLCICAVNVSV >gi|290780885|gb|ADGP01000023.1| GENE 18 17220 - 18353 1112 377 aa, chain + ## HITS:1 COG:NMA0069 KEGG:ns NR:ns ## COG: NMA0069 COG0763 # Protein_GI_number: 15793098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Neisseria meningitidis Z2491 # 3 330 12 342 384 220 36.0 3e-57 MFSVGEASGDLHGAVLAAAIRKIVPEAELFGMGGIKMKQAGVRIVYDIENLGVIGIGEVI RKIPFFLHLRQYLLTVMKKERPDVLVCVDYPGFNMRLAKKAKVLGIPVIYYILPTIWAWN KKRGKTIVDYTDLAISLFPFETELYQQIGAKAVYAGHPLLDTVRATMPKEEVYKQMGIVP ETKTVLLMPGSRQQEVRRLFPVMLQAARRLQSYVPQVQFIVPRAPTIPRSELERFIAASG VPVRIGEHSAYDMMQISTAAIVASGTATLETALMEVPTLLVYKVNTLTYALAKVLVHLDS IGLPNIIMGRRIMPELWQGQVTPQRIVTTVLPVLTNAVIREQQRRAMSSVRAALGQSGAV RRIAAIIVRFVKEKQRV >gi|290780885|gb|ADGP01000023.1| GENE 19 18350 - 20104 253 584 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 343 566 132 355 398 102 31 1e-20 MKQYDSWQGYKRLIVFLKPYRVRVFIGFICMACSGASNVVVPWLIKDVIDKVLANKDIYT LNLIAIAILVLFALRGVFYFGQKYFMTFVGQRIVNDIRERLYRHLQRLSLSYFDRHKTGA LMSNLTNDVTTLQNVITNNMVSLVQEAVILIGSLISMIVLYWKLTVITLLIIPLVIFTVN YFGKRLRLAGHDVQGKLADITTLLEEALSSIRIIRSFNREDFEIKRFLVQNDYNFQALMK ATKLTALLTPVIQFLAAIAVTGIIWYGGVSVIRGEMTAGALIAFLIYAINLTNPVRRISE ILGDIQRSLAAADRVFEILDTDSEVQEKKGAQVLPPVAGHIVFSHVTFSYDRKKTALQDF TLTIKPGQVVALVGPSGAGKSTIANLLPRFYDVTSGSVRIDGIDVRDVTYASLRRQIGLV PQETMLFNTTIYENILYGRLDATREEVDAAAKAANAYSFIQQLPQGYDTLVGDRGLALSG GQRQRIAIARAILKNPRILILDEATSALDTESEKIVQAALEQLMKNRTAVVIAHRLSTIR HADYIVVIDHGKMAEAGTHEELIAQKGLYAKLYAVQFKQEERGE >gi|290780885|gb|ADGP01000023.1| GENE 20 20117 - 21427 1092 436 aa, chain + ## HITS:1 COG:PA4988 KEGG:ns NR:ns ## COG: PA4988 COG1519 # Protein_GI_number: 15600181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Pseudomonas aeruginosa # 27 417 23 411 425 246 38.0 7e-65 MAGAVLYRIYIGLQIAASVVLLPFFLYKCIRRPSFFKKIRQRLGFIADTSAAGGASPIWI HAASLGELRAAEPIVQKLVRQDPQVPLVLSTVTETGYQLARTWPSVRVLYFPWDLPYVTA RLLRRYRPQLIILVETELWPNFLYSARKAGIPVIMMNGRISERSMRKYMRVTPLTRYILQ SVRVFLMQSRVDSSRIRQMGVASEKVYVTGNTKYDREIPYMSRSVRADLWRQLGITEQTY PVLVAGSTHKGEERWVLEAFLAIRRIFPLAKLILAPRYAEDCAFAVQEAAAQGVELVRRS TRLPVQATQGVVVDTTGELGLLYGLADIAFVGGSLLPVGGHNILEPAAWGKAVLTGPYMF HFSEICELFTKRRACMQVADGEEFVTRCVYAAEHRQWCRQMAAEALRIIKENRGTTDKNI AVVQRVLEAGNDENTI >gi|290780885|gb|ADGP01000023.1| GENE 21 21411 - 22544 1003 377 aa, chain + ## HITS:1 COG:FN1130 KEGG:ns NR:ns ## COG: FN1130 COG1663 # Protein_GI_number: 19704465 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Fusobacterium nucleatum # 58 360 17 316 325 193 38.0 4e-49 MKIRYKNKVNAYFQYLMHTSSFSVFDRIVLGLLSFFSYIYGWGVQYIRGSYVQGKKVIKK VSVPVISIGNITAGGTGKTPLTCFFAAVLQQQGKKPAVLTRGYGGTAEHTGVTVSDGKRL LVTPEVGGDEAVLMGRLLPQVPVLAGKRRYETARQAIRDFACDVLLLDDGFQHWQLHRDL DIVLIDGTNPFGNGHVLPRGILREKPEQLQRAGLLVLTKGESLSADEKKKVVCHIRQYNK TAPLVEAQLTVCGCTPLVRWRQGYRTDAPVAGTKVIAISALGNPQVFERTLVQSGYQVID SLQYADHHPYTEKEYAVWRQLAAATGAILVTTEKDAVKIAALTEAAFPLYVLSITMTITQ GRETAEKVIQAQWEDKS >gi|290780885|gb|ADGP01000023.1| GENE 22 22541 - 23278 685 245 aa, chain + ## HITS:1 COG:FN0807 KEGG:ns NR:ns ## COG: FN0807 COG1212 # Protein_GI_number: 19704142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Fusobacterium nucleatum # 1 239 1 237 245 237 50.0 2e-62 MNFICIIPARYASTRLPGKPLADIAGKPMIQRVYEQVRQATLIQNAVVATDSPKVYDTVI QFGGQAVMTREDHATGTDRIAEAAEHFPQAQVVINVQGDEPLIAPEIIDELCRAFFTYED LQMATVAAPLAPDEYEDPAAVKVVLNCRNEAMYFSRSLIPYPRHAFAAGRGPYKHIGIYA YKKDFLLQYATLPQTPAEQAESLEQLRVLENGYTIKVIRTDKRFIGIDTPEDLQRVQAYF LHKGE >gi|290780885|gb|ADGP01000023.1| GENE 23 23282 - 24127 1084 281 aa, chain + ## HITS:1 COG:FN1224 KEGG:ns NR:ns ## COG: FN1224 COG2877 # Protein_GI_number: 19704559 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Fusobacterium nucleatum # 4 274 14 284 286 328 56.0 9e-90 MKPVKAVRIGNKTVGGDGKLFVLAGPCVLEEEERVLAIGQTMKDICARLGLTYVFKASFD KANRSSYTSFRGPGLEKGLEILQRIKDTLQVPIVSDIHTAEQAKRAAEVLDVLQIPAFLC RQTDLLEAAAATGKCVNVKKGQFMAPEDMKNVLAKMVHVGNENLMLTERGFCLGYHNLVV DMRGLPIMREFGYPVIFDATHSVQLPGGAGTKSSGQRQFIGNLARAAAGSGIDGVFMEVH DNPEEALSDGPNMLYLSQVEAVLRDMTAIHEITKRSVDTAK >gi|290780885|gb|ADGP01000023.1| GENE 24 24145 - 25116 1137 323 aa, chain + ## HITS:1 COG:Cj1443c_1 KEGG:ns NR:ns ## COG: Cj1443c_1 COG0794 # Protein_GI_number: 15792761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Campylobacter jejuni # 1 201 1 201 205 223 56.0 3e-58 MDIVETAKDVLLQEAKGIEALVPRLNQSFINAVQLILASSGRVIVTGMGKSGHIARKVAA TLSSTGTPSVFLHPGEAIHGDLGMVTANDVVTAFSNSGETMEILNILPSLKRIGAPIIAV VGNPYSTLAKNAEVILDVAVEKEACPLGLAPTTSTTAALALGDALAVVLLSCHHFTKDQF AVFHPGGALGRKLLLTVAQVMHKEADNPTISADGTVQDALFLMTEKGLGAVSVVDTAGKL IGLVTDGDVRRGLETGANFLQWPLDAMMTKNPRQIRADRLAAEALHIMEKNQPRPITVLP VVDETGQAVGMVHITDLLKQGVV >gi|290780885|gb|ADGP01000023.1| GENE 25 25116 - 25649 553 177 aa, chain + ## HITS:1 COG:FN0213 KEGG:ns NR:ns ## COG: FN0213 COG1778 # Protein_GI_number: 19703558 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Fusobacterium nucleatum # 7 168 4 165 168 142 41.0 5e-34 MVPLTALRAVALDVDGVLTDGTLYYGARGEIMKAFSARDGMGISLARLGGLQPVIITGRT STMVAKRAADLKIKYVFQGKENKWQTARDVCRTLQIDIQELAYMGDDWNDLQVLRNCGFS GAPADACQEVRQAVQWVSSYKGGQGAVREWIEYILRAQGKWQDVVSAYDTSVSEICQ >gi|290780885|gb|ADGP01000023.1| GENE 26 25668 - 26600 964 310 aa, chain + ## HITS:1 COG:RP718 KEGG:ns NR:ns ## COG: RP718 COG1560 # Protein_GI_number: 15604555 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Rickettsia prowazekii # 61 286 66 288 290 103 24.0 6e-22 MGKGWQYYVMRVLSAVVCLFSYERIIAWGRKLGPWGEKLLKKQRQRGLLQVRESLHCSTE EAERIIAEMFANLGQSLLEIMYTPRLQSENISSFVTLEHQERLEEALQADKGVIVLTGHF GNWEWMGASLALYGYPTTTIVKNQPNDQVTRLLNEYRIQKGLEVFPRGGNAMIIAARALK RKKILGFLADQDGGKEGIPCTFFGKIASSPKGAAQFSYKFGSPVIPVFAVHDANHHHRVV VGEAVTCPFCGDPRKDIAALTAAITAVTETWIRTYPSEWLWFQHRWNTPPEEMTALQAHK GDETCVEKDR >gi|290780885|gb|ADGP01000023.1| GENE 27 26581 - 27132 480 183 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968954|ref|ZP_06560489.1| ## NR: gi|290968954|ref|ZP_06560489.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 183 1 183 183 324 100.0 2e-87 MWKRIGKYKFSISGSIVVLLLVIVLYSLLQETPDDFFQVPANTLVEFNGSHLEERRNGQV IWKIQAEKIQVNPKTQNAYVVHPSVFFRAPDGVEMTTAANACKVERAQKRIILQAPLQVS TNRGDTLQTAENITYRMDTQQLSGGKVVVKRRDGVRLQGDQFTADAALKKIMLRGHAQVS KGV >gi|290780885|gb|ADGP01000023.1| GENE 28 27135 - 27863 673 242 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0548 NR:ns ## KEGG: Vpar_0548 # Name: not_defined # Def: OstA family protein # Organism: V.parvula # Pathway: not_defined # 6 239 4 237 239 167 40.0 5e-40 MEKKWKKMVFSISVAVLCGLPVGVLQAAARPITITADVLAYDGETRVATADGNVYIRQGE TGLTGQHAIYNIKTDVAEVSGNACIVQPDLQVRAAKIEAYQKNHIIAAGNVQAVKGDKRL QGARVDYYIDRNYGIITGHAFLEAQGAKIWANRIEAWLQEVRAVGTGKVRVESSKNQLSA TGNMATYTQTPGKNDGILNLTGNVHAVQKGNTVQGPAVQVRAADKSVRTFGRSTLVLIPK DA >gi|290780885|gb|ADGP01000023.1| GENE 29 27881 - 28600 192 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 21 222 150 351 398 78 29 2e-13 MQIQTENLVKTYKSRNVVNGVSLRVAQGEIVGLLGPNGAGKTTTFYMIVGIEHPTRGCIR VQEQEITHLPIHRRAAYGIGYLPQEASIFRKLTVEENLLAMLETTSLSPREQKEKAMALL EEFSITKLRHRLGIQLSGGERRRVEIARCLVTDPSFILLDEPFAGIDPLAVNDIQSIINH LKKRGIGVLITDHNVRETLRIVDRAYILSEGRILLEGTPEQIATDPVAKKFYLGEEFCM >gi|290780885|gb|ADGP01000023.1| GENE 30 28617 - 29705 1153 362 aa, chain + ## HITS:1 COG:alr4069 KEGG:ns NR:ns ## COG: alr4069 COG0795 # Protein_GI_number: 17231561 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Nostoc sp. PCC 7120 # 4 362 1 370 371 195 31.0 1e-49 MRILDKYILKEFIGPFLFGVCAFTAVFVGTGTLYRIASMINEYGASAAAAAKVLVLALPS IVVLTFPMSVLLGALMAFGRLSAASEIIVMRAGGQHFVRLAMPVLVAAFFISLGTTAFNE FVVPRANNAYNRIINEEIRHHALPVSQEHVIIKNVHGQNIYGLLYARQYDGTEKEFRDIT VQEFEQDRLVRVEKADRAKWNGKKWIVHQGSIYDVSSNDNTSRTMTFENQELPFMQRPEK VQEAQKKPEELTIRELRQQIRVLTAHGVDVNKLKVEMYNRFALPLASLVCALIGAPLGLQ KQRGSSSIGFGISVVTIFIYYSIMTLADALGNGGTIAPAAAAFLPDIICGSVGIFLMIRK MQ >gi|290780885|gb|ADGP01000023.1| GENE 31 29798 - 31081 1741 427 aa, chain + ## HITS:1 COG:alr4393 KEGG:ns NR:ns ## COG: alr4393 COG4372 # Protein_GI_number: 17231885 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria with the myosin-like domain # Organism: Nostoc sp. PCC 7120 # 1 420 1 484 496 94 24.0 4e-19 MEYGTVMLVILAVMGGFIAYLGDKIGSRVGKRRVKLLGLRPKYSSILITIITGVCIAAVT LGIMSVLSKNVRIALFGMQQLQRQKEALQEQRDRLITQGQILSITVGEKNRLIEEKTHLL QQQQVQLDGKTKQLRVTQVNLQQAQLARDEQAKQLSFIQLALKEAKRQREQAERDKNSAV ADKAAAQRELTELENTKTQMVQTIEHLDKRIQLLKESMTHIREGTVMFRVGEVLSSTVVH GGGQEIQAREELSKAMQMTNRMICSQLGIRDTQAVLVYISPEEFKETAKVLQHAGPQPKL VRVIAAGNIIVGEPALVHVQLYDNKLIYRQHEVVYEGRLNPQDIRGNAELEVMRILRMVN KEARSRGVLPDPLTGNVGTLPATDMFRAITEIKQYGNVPLRITAVCAADTYTAGPLPIVL SIAPVNG >gi|290780885|gb|ADGP01000023.1| GENE 32 31091 - 31507 472 138 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0552 NR:ns ## KEGG: Vpar_0552 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 2 130 7 134 175 115 43.0 5e-25 MIFSIDPGSEKTGIAVIRQDGTLVEKHIIPTAALLSVLQDKTQQYTIAHIVMGDGTNHKP LQVQVEQWLQSNRVPIDFSLVNEKFTTVEGRRLYFQYTPLRGWRRFIPRAWQYPPEPVDD FVAWIIGKRYLEAKGGDV >gi|290780885|gb|ADGP01000023.1| GENE 33 31507 - 32364 1234 285 aa, chain + ## HITS:1 COG:CAC1325 KEGG:ns NR:ns ## COG: CAC1325 COG1284 # Protein_GI_number: 15894605 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 266 11 272 285 265 53.0 7e-71 MRYIPRALGLALGSLIYTLGLDVFLVPNHVIDGGVVGISLMAAQVSGWSFSIFIVLLNIP FFIVGYRKIGAVFTLLSLFSVVSLSFWNKIVHWAHLTPVTYDPFLSTIYGGIIIGLGVGL IIRWGGSLDGTEIMAIIVDKKTPFSVGEIIMFFNLFILGTAGFVFSWDSAMYSLVAYFIA YKMIDVVTNGLEEMKGVLIVTSHHDQVAHYLLHHMGRAVTLLHGEGAYKKETTKVLYCVV SRLEMMKIKEAVYQVDAQAFVSIFDISEAHGGLFKRHHSVPESKP >gi|290780885|gb|ADGP01000023.1| GENE 34 32481 - 32717 419 78 aa, chain + ## HITS:1 COG:TP0352 KEGG:ns NR:ns ## COG: TP0352 COG4443 # Protein_GI_number: 15639343 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Treponema pallidum # 15 78 22 85 85 72 53.0 1e-13 MAQKQLNFNIEDVCGTLSENKDGWRKELTYISWNKRAPKFDLRSWEPEYQAMTKGITLTK EEAIALRDLLDSLDFDKY >gi|290780885|gb|ADGP01000023.1| GENE 35 32865 - 33407 707 180 aa, chain + ## HITS:1 COG:BH2494 KEGG:ns NR:ns ## COG: BH2494 COG2050 # Protein_GI_number: 15615057 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Bacillus halodurans # 6 176 5 179 186 97 38.0 1e-20 MVRIAREKRHALLQQRIAENPFINDEELAEAFSVSVATIRLDRMALGIPEMRIRIKKRAQ AVQTKPRAEALVGELVECTVGKTAISIMTATEDMVDEAHIVRSQFLYAQANSLARKVLDM PVVITAIANIKYKQPVTAGDKLVAMAEVIRRRDSKHYIWVKIRKNGKEVFRTKFIIESLE >gi|290780885|gb|ADGP01000023.1| GENE 36 33423 - 34451 1245 342 aa, chain + ## HITS:1 COG:aq_1101 KEGG:ns NR:ns ## COG: aq_1101 COG0416 # Protein_GI_number: 15606370 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Aquifex aeolicus # 1 320 2 318 337 286 50.0 4e-77 MKIAVDAMGGDYAPEETVLGAIEAVHAYSLDVVLVGEEIKIRRLLEKHGAAENIHIAVVH AGQVIEMHEHPAQAIRKKKDASILVATRLVKEGKCDAVVAPGSTGAAVSAALLGLGRIKG IERPCIATPIPSKKGITVLLDSGANANSKPKHLIEGAIMGSHYAKYILGINKPQVGLLNI GEEASKGNELCQATYPVLEQLKTISFFGNVEGRDIPEGTVDVVVCDGFVGNVILKFGEGM ALFIIKLVKEAIKNSGFIAKLGALAVYPALKTLKKRLDFTEYGGAPLLGVNGSFIICHGS SKAKAIKNAIRVADELVVQDVVGHIRKSIEEEQVEQYDGEEV >gi|290780885|gb|ADGP01000023.1| GENE 37 34435 - 35436 974 333 aa, chain + ## HITS:1 COG:BH2883 KEGG:ns NR:ns ## COG: BH2883 COG0332 # Protein_GI_number: 15615446 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Bacillus halodurans # 8 331 4 311 312 333 51.0 3e-91 MVKKSNYAGILGTGHYVPEKTVTNADLEKIVDTSDAWIQSRTGICKRHFAETGMNTSDMC TIAARQALEMAGITATDIDMIIVCTLTPDTTIPSTACIVQKNLGAEHAAVFDLYAACSGF AYGAVTAAQYIETGMFTHVLVIGAEVLSRFLDFSDRNTCVLFGDGAGAAVLGPVEAGFGI LGTDMGADGRGGEHLNIPASGVAVLPTEEARKQGLTYIKMNGKEVYKFAVKVMGQTAVNA LERAGIAPENVDLMVPHQANIRIIQSAAKRLQLPMEKVFVNIDKYANTSGASIPIALDEA QRQGRIKYGDNVVLAGFGAGLTWAALAMKWAIR >gi|290780885|gb|ADGP01000023.1| GENE 38 35454 - 36395 938 313 aa, chain + ## HITS:1 COG:CAC3575 KEGG:ns NR:ns ## COG: CAC3575 COG0331 # Protein_GI_number: 15896809 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Clostridium acetobutylicum # 2 304 3 305 308 312 53.0 6e-85 MKKAFVFPGQGAQKVGMVKDLYDSYSIVREVFEEADDTLGFSLTSLCFEGPDEELMKTCN TQPAILTASTACFRVLRAEGIMPDIVAGHSLGEYSALVAAGSLSFADAVRTVRARGQFMQ EAVPLGEGAMAAVLGLEGDKIKEICAAVSAQGGVVEAVNFNCPGQIVIAGTAKAVETAIT ELKAAGAKRAVLLHVSAPFHSSLMAPAAHRLAEVLAQITIQPAAIPVVANVNGKMETDAA VIKDALIKQAASPVLWVDCTKTIQQFGASVFVEVGPGKTLCGFNRKIDRSIHSENVEDIA SLQKTAAFFQGGN >gi|290780885|gb|ADGP01000023.1| GENE 39 36397 - 37140 270 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 238 242 108 33 1e-22 MQLTGKTAIVTGGSRGIGRAIAEQLAQAGANVAIIYAGRTEAAEETLRLVQAAGSKGKII QCDVSQEAAVAAMVKEVKDDFGSVDILVNNAGITRDTLLMRMKTEDWQAVLDTNLTGAFY CTRNAVKWMMKQRSGAIVNITSIVGQIGNAGQANYAAAKAGMIGFTKAVAKEFAARRIRV NAVAPGFIETDMTAVLSEDAKKGILASIPLGYMARPEEVAKAVVFLASDEVQYITGQVLN VDGGMIM >gi|290780885|gb|ADGP01000023.1| GENE 40 37185 - 37430 343 81 aa, chain + ## HITS:1 COG:VC2020 KEGG:ns NR:ns ## COG: VC2020 COG0236 # Protein_GI_number: 15642022 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Vibrio cholerae # 8 75 38 105 110 73 67.0 9e-14 MSEESTFEKVKSIVVEQLGVDEKEVKLDAAFIDDLGADSLDIVELIMAFEEEFNVEIPDD VAEKIKTVQDTVDYIEKEKKA >gi|290780885|gb|ADGP01000023.1| GENE 41 37501 - 38460 909 319 aa, chain + ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 310 1 347 355 192 38.0 7e-49 MKLPELKIGKLIAKVPIIQGGMAIRLSTARLAAAVANEGGIGLIAASGMPFEELRHEIRL ARKLTPNGGIVGINVMVAARQFKELVAVAIEEGIDLVVAGAGFSRDMFSWGKESGTPIVP IVSSAKLAKISQTLGAAAIIVEGAEAGGHLGTNRSSREIVPEVRAAVKLPVIGAGGVLYG RDIMEMLKLGADGVQMGSRFAASVESNGSEELKKVYLRANKPEDFVLVHSPVGLPGQAIR TPFSERIMLDDAPKPKQCDVCLKKCSHKYCIIRALSRAQQGDVETGLVFSGKRMREIHDI LPVKEIFANLKREVAAIPE >gi|290780885|gb|ADGP01000023.1| GENE 42 38478 - 39743 1360 421 aa, chain + ## HITS:1 COG:sll1069 KEGG:ns NR:ns ## COG: sll1069 COG0304 # Protein_GI_number: 16329903 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Synechocystis # 1 418 1 415 416 460 55.0 1e-129 MKRLEKRVVITGLGVISPVGIGVETFWQSLLAGKNGIGPITHFDAEEYTARIAGEVKDFR PTDYGIDKKEARHMDLSTQYAVAAAKMALDDSRLDLDAEDRDRIGTVVGTGIGGIETLHN LYKGLFDKGPSRVNPFVVPKMIGNMASGQVSISFGLRGHCISVVTACATGTNSIGEAFRM IQRGELFAAVAGGTEAAVSPASVAGFASMKALSTRNDDPAHASRPFDKDRNGFVMGEGAG IVVLEELEHAKQRGARIYCELSGYGSNADAYHITAPAPDGLQQSKCMASALADAGIAPEA VDYINAHGTSTHLNDLNESKAVVRVFGDHAKELLISSTKSMTGHLLGAAGAVEAIACAMT LVSDKVHPTINLVESEEELKALGLNYVPGKAVAKKVRVALSNSFGFGGHNATLVFKKYAD A >gi|290780885|gb|ADGP01000023.1| GENE 43 39751 - 40461 796 236 aa, chain + ## HITS:1 COG:lin1919 KEGG:ns NR:ns ## COG: lin1919 COG0571 # Protein_GI_number: 16800985 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Listeria innocua # 8 233 3 226 229 199 48.0 5e-51 MDNTRKKQLEEFLRTVGLPPFQNLLLLDQALTHSSYANEHKIRHGYFNERLEFLGDAILD LVVGEYLFLQYPQMQEGELSKARASIVSEAPLAAVCSAFHMGKYLLLGHGEISSGGRERP GILADAFEAVVGAVYMDASYEEARKFILRHLRDYLALVENGHYDQDYKTLFQEYIQRDGE HHITYSLCKESGPDHDKTFTMQVAADGKVLGEGCGKSKKMAEQHAARQALLRLHAI >gi|290780885|gb|ADGP01000023.1| GENE 44 40504 - 41580 840 358 aa, chain + ## HITS:1 COG:CAC1749 KEGG:ns NR:ns ## COG: CAC1749 COG1243 # Protein_GI_number: 15895026 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Clostridium acetobutylicum # 5 298 7 300 358 224 38.0 2e-58 MKTSIIPIFIPHIGCPYRCVFCNQWKITGQHRVPTATFVKETIQQYMQAATLSRHWEVAF YGGSFTAVPTALQESLLEPATQALRQGKIHGIRCSTRPDAVGKDVIERLLRFGVNTVELG VQSMDDTVLQRAKRGHTAADVVQATRRLHKYGLLVGHQLMPGLPGEDERSLQQTAAAVCA LQPDAARIYPVAVLAETELAAQYRQGLYRPLTTAEGIRRGAYLKQRLLEHGIPVIRTGLQ ATKVLDDGEQVLAGAYTPAMGELIDTYRYRRQLFSLLDRLNLCTSVHIYYAPSETSRVRG YRNITYKYCLWRYRVPFIWQAGKDLPNKRIFVHYGQMVYTIDVDTGGVLITKKEGSYE >gi|290780885|gb|ADGP01000023.1| GENE 45 41573 - 42328 813 251 aa, chain + ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 39 247 37 237 241 131 38.0 2e-30 MNRKVIIAEADLAIAEQLQDWLAELDPNFCIQPVCSDGENALAQIMTQAPGIVFLDVELP RINGVEIARTLVKMKEHPLIVFLASSEKFAAEAFLVDALDYVLKPLDKKKIQHVSKRCHW ILRAEEMMETKAVGTDETSELRHLAVDKGDTMEVIDCLNIRFIFSKNRYAYISMKNGDCH EMRISLRDIEKQLPHSLFFRCHRNYIVNVEYIKQIKLWFKRGYLLILKGAEEVEIPVGRA YIEILKEHIKM >gi|290780885|gb|ADGP01000023.1| GENE 46 42482 - 43888 1299 468 aa, chain + ## HITS:1 COG:CAC2791 KEGG:ns NR:ns ## COG: CAC2791 COG0535 # Protein_GI_number: 15896046 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 12 455 15 452 461 293 35.0 4e-79 MINLLHETEMKVVEKIVDHILDERDLKDRQKTLLHLTDVMQKYFGTLFQEQSFDDARRLI QSDGKWLRFLNRALNELDRNVVKHAVMNLGFEAGFFGLKTRDAAKQKYKCNIPWAILFDP TSACNLRCIGCWAAEYGHTLNLDYEVMDKIVREGKALGIHFYLFTGGEPLTRKADLIRLC EEHNDCEFHSFTNGTLVDEAFCKEMQRVGNLSLSISLEGFEEVNDSRRGKGCFQHVMHAM DLLREHGLIFGTSICYTSKNIDTVTSDKFLDMIISKGAWYTWYFHYMPVGNDASIDLLPT KEQREYMIHRIREIRSVEGGKPIFAMDFQNDGQFVDGCVAGGRNYCHINPNGDVEPCVFI HYSSANIKKQSLLECLQQPLFKEYGAHQPFNKNHLQPCPMLENPQFLVKMVRRSGAHSTD LQSPEPVEHLCGKCVSYAKHWAPVAKDQWAQVGTEAFTETDHMQKEAK >gi|290780885|gb|ADGP01000023.1| GENE 47 44192 - 45571 1544 459 aa, chain + ## HITS:1 COG:MJ1231_1 KEGG:ns NR:ns ## COG: MJ1231_1 COG5016 # Protein_GI_number: 15669416 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Methanococcus jannaschii # 4 444 2 441 463 486 54.0 1e-137 MARIKITETVLRDGHQSIAATRMRLRQMIPVLEAMDEVGYNALECWGGATFDTCMRFLDE DPWERLRTLKRYVKKTPLQMLFRGQNILGYRNYADDVVYEFVNRAVDNGIDIIRVFDALN DPRNLEAAVKAAKDTKAVKIQGALVYTISPIHTMESFTEVAVELQEMGVDSICIKDMSGL LTPYDAYNLVRMLKKHISVPLELHTHCTCGLGEMTYLKAVEAGVDIIDTALSPFGEVTSQ PPTESVVMALQGSIYDTDIDVERLWPLTEHFKKVRKELAAEFKLTMPDQINPAVRKYQIP GGMLTNLYNQLKGQGAEERFDEVLAEMPQVRKDLGYPPLVTPTSQITGSAAALNVLYGRY KIITNEVRDIVRGKYGRVPGKIDPAFRKMCIGDEPVINHRPADDIAPELGKAKEELAAQG FPDAAPEDVLSFALFPEVALPFFKQRAERNAGTDIGEQK >gi|290780885|gb|ADGP01000023.1| GENE 48 45710 - 46522 917 270 aa, chain + ## HITS:1 COG:CAC2358 KEGG:ns NR:ns ## COG: CAC2358 COG0566 # Protein_GI_number: 15895625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Clostridium acetobutylicum # 4 260 5 255 261 136 31.0 3e-32 MDEITSRENERIKKACALKQKKERQKQRKVLVEGWRLIADAAAQGLSPVQCFITPQAATH ERFQGLYALGKRLSWQFFVVAPKVYDKLKETQHPQGIAAVLPYFTTALDLTERIAPQRPI VYLQSVQDPGNLGSIIRTAAAADAGAVVLSRDSVDVYNDKVLRSAMGAVFKIPLVTDVDM ETLQAYCLRTHRRLTGAAASGSSSYTQLDYAQARVLAFGNEGNGLALPFLQACAETVTIP MRPETESLNLAAAVGIVLYKAWERQGFLYG >gi|290780885|gb|ADGP01000023.1| GENE 49 46531 - 47451 725 306 aa, chain + ## HITS:1 COG:CPn1068 KEGG:ns NR:ns ## COG: CPn1068 COG1039 # Protein_GI_number: 15618976 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HIII # Organism: Chlamydophila pneumoniae CWL029 # 89 305 83 294 298 114 37.0 3e-25 MEGVLQAAVQELVRLLQEKGWEILNRKEINYGCQVVCRDNAGGQTQANIYYSKKKGLSFV AQGKDGNAAAALRRCWEESRHGTAVPALQGIRPSLRMGCDESGKGDVFGPLVVAACILTE EDAAQLRALGVRDSKMVRSTQIKRLAETIKTRLQDRYSVQVVMPQEYNRRYVCLAENGKN LNDLLGQLHARNIRRLLSKHKCPCIIVDKFGSERYVLQELGTLAKTHTVIQIPHGEADTA VAAASILAREAFVAAMEELRRLYGMSFPMGAAQGIQMAIDTFLSGHTAAELQQVGKLHFK TFNGVR >gi|290780885|gb|ADGP01000023.1| GENE 50 47459 - 48307 819 282 aa, chain + ## HITS:1 COG:lin0230 KEGG:ns NR:ns ## COG: lin0230 COG3394 # Protein_GI_number: 16799307 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 3 281 2 245 245 100 30.0 3e-21 MNRLIINADDFGIHTAVNRAVVQAFQQGVLTSTSLLAAGAAYEEAVTAANDNPGLGIGIH LCLVGSLSPVLDPKEVPSLVTEEGVFPESYGTVMKNILLGKVDYGEIYRELDAQIEKIMR ARIRVTHVDSHQHLHMLPPVWKIVQALMKKYGLHRVRIPRESYLFKPFTGNPVRIMGRNG LTWLSEKAMRGVRQFGYTTSDYFWGMLDGGSMDETHLGYILKNLPFGVHEIMMHPAISTA TMAKTFAWGYRWEEEYRALVSPYIRHVLSQKKIQLIHYGELP >gi|290780885|gb|ADGP01000023.1| GENE 51 48320 - 49249 1019 309 aa, chain + ## HITS:1 COG:TM0509 KEGG:ns NR:ns ## COG: TM0509 COG0451 # Protein_GI_number: 15643275 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Thermotoga maritima # 1 303 1 304 309 274 48.0 2e-73 MNILITGGAGFIGSHIGDALIAAGHRVIVVDNLSTGRKENIPPQAVFYEADIRDREYMEN IFSQEHIEAVYHEAAQTMVPYSLAHPWEDAELNVMGLVGILELCRRHTVRKFIFSSSAAV YGDNTRVPLKETEATTPLSFYGLTKCTAEAYIRMYHDIFQVPYVILRYANVYGERQGGNG EGGVVFVFSQALAQGKEITVFGDGEQTRDFVYVKDVARANVCALQANGTEGTYNIGTNIE TTVNALKEMLVYIAGTPTHVHYEPARSGDIYRSVLANTKAVQELGWEPTTKLLGGLQQTY RYFAGEVGK >gi|290780885|gb|ADGP01000023.1| GENE 52 49246 - 49695 753 149 aa, chain + ## HITS:1 COG:BH1214 KEGG:ns NR:ns ## COG: BH1214 COG4492 # Protein_GI_number: 15613777 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Bacillus halodurans # 7 149 4 146 147 133 45.0 1e-31 MKKENGQKFYLVSEDILPEAIKKTIKVKELLKHHQGQTIHEAVQKMDLSRSAYYKYKDHV FPFYEVSQGKIVTLALLIYDQPGELSQVLHAIALHKGSILTINQGIPLQGMADVSISVET KNLSIPVDELVKRLRNLSGITKVEIIGQA >gi|290780885|gb|ADGP01000023.1| GENE 53 49715 - 51001 1762 428 aa, chain + ## HITS:1 COG:CAC0998 KEGG:ns NR:ns ## COG: CAC0998 COG0460 # Protein_GI_number: 15894285 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Clostridium acetobutylicum # 1 425 1 425 429 316 40.0 5e-86 MKQVSIALLGCGTVGKGVIDVLLMNGPIIEEQLNTKITVKRVLVRDINKYEQMNLPSAIL FTNNFQDIIDDEEISLVVEVMGSADFAKECIEECFKRGKSVVSANKDLIADYGIPLLKLS KEKQVDFQFEASVAGGIPIVRAMYASLNGNKIDEIIGIMNGTTNYILTQMTCRGITYEEA LREAQVKGYAEADPTNDVSGYDAARKIAILGTLGFHSEVTFRDVQVEGIEKITAEDIRNA LEMGYVIKLLAIARQDKDGISLNVHPGFIRKTHPLANVADAYNGICVRGNCVGDVMFYGA GAGSLPTASAVVSDIMNVVLHEHIGVTGQRDFVSHEAKLKPQASICSPYYLRLLVQNTTG VLAGIATVLATYHISIRSLIQKDETADIAEVVLLIDQSSHCVVQKALKELSELTCVHTIA NAIRVIEV >gi|290780885|gb|ADGP01000023.1| GENE 54 51005 - 51928 996 307 aa, chain + ## HITS:1 COG:sll1760 KEGG:ns NR:ns ## COG: sll1760 COG0083 # Protein_GI_number: 16330283 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Synechocystis # 4 306 3 305 306 185 39.0 1e-46 MRKTWHVRIPATTANLGAGFDSLGMALTIYNDFYFTADSQVDTITVTVSGKGEGTLSGDF SRNLIGRAMQYAATAKHTALPSGGHLRAVNRIPLNRGLGSSSTAIVGGLLLGDAVTEGSL STQELLDLATLMEGHPDNVAPAILGGLTVSIQENKRIFCQKLPFPEALQAVVVVPEAEVP TAAARKVLPKQVPHAAAVYNAGRVGFFLASLWAQQYDQLQYGMQDMLHVPYRLPLITGGK EALQAALAVGAKGATISGSGSTLIAIATANAPQIAAAMAAVFASYHIRTESHILHCDEEG ARISTVV >gi|290780885|gb|ADGP01000023.1| GENE 55 52107 - 52862 884 251 aa, chain + ## HITS:1 COG:TM1559 KEGG:ns NR:ns ## COG: TM1559 COG0274 # Protein_GI_number: 15644307 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Thermotoga maritima # 2 213 30 242 248 135 37.0 7e-32 MNIMSYIEQVQTAPDATPADIKKVCEEAIRFHYYGICVNSIYVQYAKSLVAHAPVRVACT VGYPSGGAAISVKAEECAYAITHGADSVAMVLAVGRAKCGEWDYVTEDMRRVVKAADGHE VQVILEAGLLNDYEKARACHMAVLAGATSVRTVSGFFPYTTNVGDITLLRKSGDGKIAVS AGGITDYEEGKQVLAAGAANISTTCGEALVRAAVAEAETQGLYKDWDETNPFEKMTPEEL FRYLQEKQQRE >gi|290780885|gb|ADGP01000023.1| GENE 56 52954 - 53610 656 218 aa, chain + ## HITS:1 COG:TM1559 KEGG:ns NR:ns ## COG: TM1559 COG0274 # Protein_GI_number: 15644307 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Thermotoga maritima # 2 214 30 242 248 199 47.0 4e-51 MNIAGYIEHTNLQAVATAADIASLCNEAIQYGFFGVCVHPSYITYAKQCLQHTDIRITTV VGFPLGATGAAVKAAETAYAIACGADEVDMTVAIGRVKMGDWDYVADDMRRVVIAAEGRP VKVILETAYLTEKEKKQVCYLAGETGAAFVKTSTGFAPGGATVEDVARMASWAAPALGIK AAGGIRDYQTAMRMIAAGATRLGTSASVRIMEGALHEG >gi|290780885|gb|ADGP01000023.1| GENE 57 53600 - 54541 784 313 aa, chain + ## HITS:1 COG:BH4023 KEGG:ns NR:ns ## COG: BH4023 COG1235 # Protein_GI_number: 15616585 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Bacillus halodurans # 49 286 6 246 264 172 35.0 8e-43 MRDNEQTLQDLAHTVGCIRQRHLLNTAAGTPESVPVRKETMRKKDCLVSMLASGSKGNCA YIRCGNTRILIDAGISCRRVETGLRRYGCTLADIDAVFLTHEHQDHVSGLRTLLKKSQMP VYTTRETWQAIGNAVVGHQNRFMPVMRRTQVGEMQIVPFAISHDAARPVGYSVYHEQVKV TLATDLGKITPAVLQAAAYSDIFILEANHDEQMVRNGAYPYYLQQRILGQLGHLSNRTAA AFLREVPNKGRMQVLLAHRSETNNTPSLALRTVRTILSQGGRAVGQDVILRLAGQHGAVR MEHPDFGQRQRTY >gi|290780885|gb|ADGP01000023.1| GENE 58 54561 - 55670 1329 369 aa, chain + ## HITS:1 COG:alr0702 KEGG:ns NR:ns ## COG: alr0702 COG0265 # Protein_GI_number: 17228197 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Nostoc sp. PCC 7120 # 47 368 78 428 429 213 42.0 4e-55 MIKHKQTVTAIFAIALIAVGAFGGFIWRGNHAVDGNAAAGQNAPRQRVEASLTAARNTAI VQAVKRVGPAVVGITAQVYTRDPFHGEVTVNEGIGSGIIFEPNGYIVTNAHVVGNAAQVT VSLADGKRIKGTVVGRDSLTDLAVVKVTEKNLPVAVFGDSNSLQPGETAIAIGSPLGLEF QGTVTAGVISSVNRAFGPLGDTFRLIQTDAAINPGNSGGALVDATGKVIGINSAKIAKAG VEGLGFAIPVNAARPILKELIENGKVRRPYLGFFGMDSKMALRFGLDLEEDGVLVYKLVA NGPLARAGLHAGDVLVRINERPVPNLNALQGALNEYHIGEKVTVHGKRQGRSFSAAVVLT AMPDQGEIP >gi|290780885|gb|ADGP01000023.1| GENE 59 55745 - 56146 522 133 aa, chain + ## HITS:1 COG:SP2238 KEGG:ns NR:ns ## COG: SP2238 COG1576 # Protein_GI_number: 15902041 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 4 132 30 158 159 120 44.0 7e-28 MKPFAQVEITVLAEEKMPARPSPAEKMQVLEKEGAKMSAHIRDTSYIYALDVQGRLLSSE CLAAQMEEKSVHGYSEFTFIIGGPFGLAESVRTRAHQCISFGRMTFTHQMMRLLLLEQLY RVNKIQRHEPYHW >gi|290780885|gb|ADGP01000023.1| GENE 60 56252 - 56722 609 156 aa, chain + ## HITS:1 COG:alr3813 KEGG:ns NR:ns ## COG: alr3813 COG0517 # Protein_GI_number: 17231305 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Nostoc sp. PCC 7120 # 5 146 4 146 152 77 27.0 1e-14 MKACTAADIMEKVFISAHTDTSVFDLVHYFVKSKISAIPIVDDDQVLVGIVTDADLLYKK IKPHVPHYVNLLGASIYYNGIGKYHKGFKKLMACTAGDMMTKDVIIAAPEADVEQLAGVM VAEHLKVIPIVKNNRIVGIVTRYHILDELYKEFGEE >gi|290780885|gb|ADGP01000023.1| GENE 61 56938 - 57501 780 187 aa, chain + ## HITS:1 COG:FN1983 KEGG:ns NR:ns ## COG: FN1983 COG0450 # Protein_GI_number: 19705279 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Fusobacterium nucleatum # 1 187 1 188 188 250 64.0 1e-66 MSLINKEVADFKVQAYQNGAFKEVTKKDLLGKWSVFVFYPADFTFVCPTELEDLANLYSQ FQTINCEVYSVSCDSHFVHKAWHESSEAVGKVTYPMLGDPTAALAKDFEVYIESDGMAER GSFIVNPEGKIVAYEVNAGSVGRNAEELLRKVEASQFVAEHGDQVCPAKWKPGAATLKPS FDLVGKI >gi|290780885|gb|ADGP01000023.1| GENE 62 57513 - 59165 1617 550 aa, chain + ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 4 317 2 314 332 286 48.0 9e-77 MNTEMMYDLIIVGGGPAGLSAAIYAARARNKVLIVEKGEIGGQITAAGALVNYPGVPNTT GKEVTEAMYEQALSFGAQWLATEVTGLELTDTIKTVHTKKGDYQSLAVLLATGANPQSVG FTGEKEFRGHGVAYCATCDGEFFTDKDIFVVGSGADAIEESIFLTKYGKSITILVKKAAF DCAQTLVDSLQEYPSISVKYNSEIVKAGGTDGILSYAEFKNRKDGTTWRYDAPPDDTFGI FVFAGHQPNAVLFGDAIRLDPKGYVLTDGEQKTTVDGVYAAGDLCVKSLRQVVTATADGA IAATAALKYCGAMHRQLKLPKFPPTSAIPATAKKNDPTTVPSPHTAGTFLTAEIRGQVEP ILAKITSVVTLQVHGNDTDLSKELQEAAQEIAALSEKIKVQTVPQSPENIPYLSLLKGEN TDTGIAFHGVPGGHEFTSFILALYNVAGPGQEMDEETKTALADIDATGKKIAMKVLVSLS CTMCPAVVQETQRLAAASSHITAEMFDLQHFPKLKNKYRVMSVPCLVINDHDVHFGKKSM HELLQLLKNV >gi|290780885|gb|ADGP01000023.1| GENE 63 59608 - 60519 388 303 aa, chain + ## HITS:1 COG:lin1114_1 KEGG:ns NR:ns ## COG: lin1114_1 COG4936 # Protein_GI_number: 16800183 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Listeria innocua # 4 150 5 149 149 117 40.0 4e-26 MTITLSNEEQVRRTVSSIMHDYTHATGIACVYADIRGRECSNTYNFTKFCKFIRSVPAFR DKCYQCDLCGGIETLKKQQCCPYRCHAGLVDFAVPIVKNNKIYGFIISGQMALEDIRIQY VQKPTEWKFDNNVNKYFQSIPKYSYEEVTSASRVLQTLVSCQFPYFMRETLPVEELVENV SAEEAEIFVGMRPEIQQAVRYIRKNLHGKLSLKNIAEEVYLSESYLSKLFKQEMKINLIQ YINQCRIMEAKKILCSSKKSVDTVSRELGYHRTSYFCKIFKQHVGKTPYAYRKKSLDLQN NEN >gi|290780885|gb|ADGP01000023.1| GENE 64 60796 - 63387 2436 863 aa, chain + ## HITS:1 COG:SP0251 KEGG:ns NR:ns ## COG: SP0251 COG1882 # Protein_GI_number: 15900186 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 8 860 16 809 812 493 35.0 1e-139 MDVLAKGFSQPTARILALKHAIYEATPTVEADRAELLTASYKETEGYPIIIRRAKALEKI LKEIPIAIRNNELIAGSLTVGIHGCQIYPEYSFDWIEKEFKTMATRMADPFVIPEETAER LHEAFLYWPGKTTSELATSYMSKPCLEAQTNGVFTVGNYYFNGVGHVCVNYDKLIRQGAS GIIKEVEEAKKKLSVGIPEDIKKRDFYDAVIITYKAVIAYANRYADLCDQLSAREADTSR KEELIMMAANCRRVPEYPATNWWEALQAFWFVQLIMQIESNGHSISPGRFDQYMYPHLVS DKEISKEFAQELLDNVWIKFNDLNKTRDAVSDQAFAGYAVFQNIQCGGIDENGVDATNPL SYMMIEAAAHVAMAAPSFSIRYSNKTPDEFLYRACELVRLGLGYPAMYNDEVIIPAMMNR GIPLKDARTYCIIGCVEPQVPHKTEGWHDAAFFNIAKVLDITLHNGRSGKIQLGPQTGEM KDFKNLDELMNAYRAQMAYFVELLVEADNAVDYAHAERAPLPFESALVEDCIGRGKSVQE GGAIYNFTGPQAFGVADNGDSFAAIQKHVFENKEVTMSELQEAIEHNFGYPDETGKMSSW FNLSGTNNEDSVVCNIDEKKIYEAVKQILSAKGNIDITELQQNLRKNGAFTSERVSSVSA NAARYQEIKRIMENTTWFGNDDDIVDMITREAGQIYAREVQKYKNPRGGQFQAGCYPVSA NVLFGKDVAPLPDGRLAWMPLADGVSPRAGCDTNGPTAAVMSVAKLEHETFSNGTLYNQK FSPGALEGDEGLKRFAALCRAYFDNKGMHVQFNVIDKKTLVAAQKNPEQHKDLVVRVAGY SAQFVSLAKEVQDNIIDRTEFEF >gi|290780885|gb|ADGP01000023.1| GENE 65 63426 - 64367 740 313 aa, chain + ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 10 294 4 290 302 214 39.0 2e-55 MSTVTIDYQVEGDIFNIQRFSLNDGPGIRTIVFLKGCPLSCWWCSNPESQRRRPVVMYNA DKCMHCRRCEEVCKQHAVRFLKDGTRKFFYENCTGSGDCAAVCEYNALEMKGQRINVGEL IKILKKDRSTFRHSGGGVTVSGGDPFMQAAFAGELFKACKAQGWNTAVETEGCAETEKIM SILPYIDTILLDIKHMDAEKHRQFTGVSNELILYNAQKMASVSPLVIRVPVIPKFNHSEE EIRSIAKFAFLLKNVKYIHLLPYHELGERKYQMLGMEYKMNRLSAVSLSNEALECYRNIV EKEGVRCRIGDES >gi|290780885|gb|ADGP01000023.1| GENE 66 64378 - 65190 836 270 aa, chain + ## HITS:1 COG:lin1116 KEGG:ns NR:ns ## COG: lin1116 COG4816 # Protein_GI_number: 16800185 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 4 270 6 267 267 288 62.0 6e-78 MDQQLLEKVMKQVQHELESQVQVNTNGESIFPKEKEAGIKTMAGCTEFVGTAIGDTIGLV IAGVDPLLKDTMKLGKFRSIGIIGGRIGAGPQIMAVDDAVKATNTEIISVELPRDTKGGA GHGSLILIGAEDVSDARRAVETALQVLPKYFGDVYGNEAGHLEFQYSARASYCLEKALGA KFGKAFGMTCAGPAAIGVVLADTAVKAANVEVVSYASPGNGKTSYSNEVILCFSGDSGAV RQAVKAAIVVGKKLLGALGDEPKSTTTPYI >gi|290780885|gb|ADGP01000023.1| GENE 67 65218 - 65496 504 92 aa, chain + ## HITS:1 COG:lin1123 KEGG:ns NR:ns ## COG: lin1123 COG4577 # Protein_GI_number: 16800192 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 3 89 2 88 91 108 83.0 3e-24 MTNEALGMVETKGLVGSIEAADAMVKAANVTLIGYEKIGSGLVTVMVRGDVGAVKAAVDA GAASAKVVGEVVSVHVIPRPHTDVEKILPHLE >gi|290780885|gb|ADGP01000023.1| GENE 68 65511 - 66227 590 238 aa, chain + ## HITS:1 COG:no KEGG:Cbei_4057 NR:ns ## KEGG: Cbei_4057 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 235 1 255 257 94 29.0 4e-18 MKVSEKDLIRLIIQVTQQINNAQNRLKEPVYIIFSTSFQDPGDKFWQEISRCKQSIAIIP DFWTSVYSNKLQERCSSLLVVPQKESGELSLDGSLTIYPSVSHTFAAKAALCISDTFETQ WLKKCMAMGTSVCFLLSGLEKFTGNESGFYKKQIMHYYKTLLMYGIDICSADNLFEQGEL KEKNEKKVIFLQERIITSYDIYAMEEGSITHILPKTIVTAAAYEAAEQKRIQIIRTGR >gi|290780885|gb|ADGP01000023.1| GENE 69 66233 - 66517 431 94 aa, chain + ## HITS:1 COG:lin1122 KEGG:ns NR:ns ## COG: lin1122 COG4577 # Protein_GI_number: 16800191 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 93 1 93 145 76 43.0 1e-14 MGKALGLIEVIGFSTAVEVADAMIKSADVILIGVEITKGNGFVTIKVSGDVGAVNAAVET GKAVADLFGKFISADSIARPHEAMHYVFIEKEKK >gi|290780885|gb|ADGP01000023.1| GENE 70 66535 - 66732 180 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968998|ref|ZP_06560533.1| ## NR: gi|290968998|ref|ZP_06560533.1| hypothetical protein HMPREF0889_1221 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1221 [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 71 100.0 3e-11 MDIEQREEETSIYEGAVPSGEMEEGNSTSLKSDELHSDVSEIGNEDTEKKVNNKVRKSRT KRTKQ >gi|290780885|gb|ADGP01000023.1| GENE 71 66772 - 67032 351 86 aa, chain + ## HITS:1 COG:sll1030 KEGG:ns NR:ns ## COG: sll1030 COG4576 # Protein_GI_number: 16329366 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Synechocystis # 1 86 1 86 100 70 44.0 8e-13 MRIGRVIGSIVSTKKEETLVGAKLMIVQYETREGKPYGNEAVAVDFVGAGIGETVLVASG SAVRTAALMKGKPIDLAIIGIVDTIN >gi|290780885|gb|ADGP01000023.1| GENE 72 67089 - 67931 554 280 aa, chain + ## HITS:1 COG:FN1783 KEGG:ns NR:ns ## COG: FN1783 COG4820 # Protein_GI_number: 19705088 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Fusobacterium nucleatum # 5 268 7 270 274 249 50.0 4e-66 MRIQNKMLSEFASLVDSGEVRPFSGNLKVGVDLGTSNIVVSVIDSKNYPIAGMTIPSTVV KDGIVVDYVGAIRSLKYIKGTLEKKLGISITQVATAIPPGISAENIRCISNCVEGAEWEV THIVDEPTAAADLLNIQNGAVVDVGGGTTGISILHNGKVVYTADEPTGGTHMTWVLAGYY GVSFAEAEIIKKDKKREKEVFSLVCPVIEKMAGITAKCILGKNIKKLYVVGGACSFMEFE KVFGKIVPVEIYKTNDSLFVTPLGIAMSQRVEGNYDNRNR >gi|290780885|gb|ADGP01000023.1| GENE 73 67909 - 69333 834 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 474 1 474 477 325 37 6e-88 IMITEIDENMLKEVVQRVIQQAKADLQAESSREVCEYGVFNCMNDAIMAAEKAQKQLLVQ SPTQRQQWVDIIRKTCLSKEVMKKISHMAVDETGIGRYSDKVIKNTAAAKFTPDINDLIT EARSGEHGLTLFEYCPFGVIGAITPTTNPTETIINNSIGMITGGNTVVFSPHPRAKNTSI YLVKTLNKALHQAGAPLNMITMIAEPSLEATDEMINHPSVRMLVATGGPAIVKKVLSSGK KAIGAGPGNPPVVVDETANIEQAAKDIVDGSSFDNNVPCIAEKEVFAVDSIFDYLLISMK RVGAYEIKDNICVEKLWNLVSKEDGSGPKVEFVGKSAKYILQKIGIEVEDTIRLIIMETD KSHPFVQQEMMMPILPLVRCENVDQAIAWAYEAEHGNRHSAMMHSTNITKLSKMAKLMET TIFVKNGPSYAGLGIYGQGYTTFTIAGPTGEGLTSPRSFCRKRECVLKDMFNIR >gi|290780885|gb|ADGP01000023.1| GENE 74 69349 - 70473 1039 374 aa, chain + ## HITS:1 COG:lin1130 KEGG:ns NR:ns ## COG: lin1130 COG1454 # Protein_GI_number: 16800199 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 1 373 1 371 372 285 44.0 9e-77 MDRFQIMTKVVSGIGALQVLQEYKKERILIICDTFLRQSGILESVLCELHDSNRFSIYDG VKPDPSVEIVAQVITHIITLKPTKIIGFGGGSSIDTVKAAIYFSLQQNVIEDKPEFIAIP TTSGTGSEMTSFAVISDVKEKKKIALIHDSMYADMALLDPKLTLSVPPLITAHTGFDALT HALESYVAKKASFFTDGIDVKVVSLILENLILCYKNGKNLKAREAMSTAANMAGIAFNLA GLGVIHSIAHQLGGMFHIPHGLACAIALPIGIQFNCRQQETLNKYAEMSYQLGIAPRTVS LKHAVDLLCTLIKALRKEMEIESCIRELDLNIERNMYDEMISIMAKNASQDGCLTENPVS VSIPEFLELFKKLY >gi|290780885|gb|ADGP01000023.1| GENE 75 70758 - 73367 1733 869 aa, chain - ## HITS:1 COG:aq_793 KEGG:ns NR:ns ## COG: aq_793 COG0210 # Protein_GI_number: 15606167 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Aquifex aeolicus # 6 454 2 395 669 164 27.0 6e-40 MNLSTQLNETQHRIVTELDHNILLQAPAGTGKTAILAHRIAYILACRRAREKEILCLTFT NRACKELQHRLQELIGLSAQNVTIKTIHAFGYLVLQEEGKKNAAVPYDSLIYDEEDCRHL LASLIPANYQKSPYLLKISALIEKIKKNTTAVNEPAVTHPDAYVFSRLVSRKYLSSLCEN YNGTPNPRLENWLVQHGLALYRQYNQCLRQNHALDFHDLILQAHRLLQQPEIRTRWQTRF RYLTIDEIQDTSDWEYAFLSPLFPEKNLLFCGDAFQTIYEWRGSHPDFIFADIKKKYHPL CLTLTTNYRAAPPLVQAAADCLQALFPDRQSPKILAGTPVDATPEPIQKHSFPTYLEEGA WIFKTIQAMSKDERRHVCIMTRTNRQNKQLWLALRACNARVRADRTLPFSRIEQFHLFKR QEIKDVLAFLRLIINKNDALSMHRIAQRFIPHLGHAVLRQLEGPAYKTAGIHLSDFSDPR ILTAGDPFGLLLHHLQEGSLIVFDVESTGTNPLQDEIIQIAAVRLRTDGTIQEKFMTYLR PSRTVGDSYAIHGLSDEFLQKNGTDARRALQNFLTFAKDSLIVGHNVLYDISILQSELSR LSLPCPTEMPYMDTLDIYRRFYPDLEKYTLEFLSHHFSTAHKPSHNAWDDILATADLLQT VLQEKILSQTATRRELFTTYAHRFISFSEKISALRRQSYSLRPHELLTRIMLHCGVKEYY AKIDEQEASRGEPSHRLDHIRYFYRLAAEQDDPSRSPRDNLQELLQLASLSNSELDTLLQ KRAQIPIITVHQAKGLEYDTVFLAALQDGTFPLSRPIQTGNLDEEKRLFYVAITRAKKKL YLTWHEAENHIKQNPSRFLQTLPLTAPRG >gi|290780885|gb|ADGP01000023.1| GENE 76 73539 - 74735 1068 398 aa, chain + ## HITS:1 COG:gspE KEGG:ns NR:ns ## COG: gspE COG2804 # Protein_GI_number: 16131205 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 16 382 111 488 493 307 45.0 2e-83 MKREPEEWRQVSAGDIVTALLTRAIEEKASDIHVEPLDTVMRIRFRRDGVLTTAAMLPGD KGEKITARLKILAGLDIANKRIPQDGRIIWQEKTQTIDMRVSTMPTIRGEKTVIRLLDTG QLELELSCLGMLPEVQAVLRQLIHRSHGLFIFSGPTGSGKTSTLYAALQELHLPEVSIAT LEDPVEYKVEGICQSQIQTKGGLLFQNGLRALLRQDPDILVIGEIRDRETARIAVQAALT GHVVFTTLHTATAVEVPERLIDMGVEPYLVADALVGMTAQRLVRRLCPHCRKKREDSQIR GLYRHHRCERCFFSGYKGRFSLCEIVRVGETVRHCIRQGGMVAAMREAAIADGAIFMETV IRTQLQSGNTDWEEIQRVCDGSEGNGYGSGNDSDTSRS >gi|290780885|gb|ADGP01000023.1| GENE 77 74698 - 75642 1133 314 aa, chain + ## HITS:1 COG:yggR KEGG:ns NR:ns ## COG: yggR COG2805 # Protein_GI_number: 16130851 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli K12 # 1 308 16 333 341 202 40.0 8e-52 MDLETILTRAVAEKATDIHLQSGRPPYIRVGAELQPLALPHIQTADLQAWSKETGPGEAW SFSWKEGIRCRGQRSESRHGPHWALRVLYPLSSLPQEENPVLIQRLGTLLQGLVLVCGAT GSGKTTTIWRVLEYINQHRACHIVTLEDPVEYVLEGKKALFTQREVGGHVDSFEEGVRQA LRQDPDIMLIGEIRDKYTLQNAITAAETGVLVFSTLHSPSVAGAVSRMVGMFAAGEQEEI RQRLAAVLASVVAQQCFRDKNRMHIVRELLWRTPAAAQVIRSGKEFHLTDVMQTGGEYGM ETMAQALKRYRSGI >gi|290780885|gb|ADGP01000023.1| GENE 78 75639 - 76838 734 399 aa, chain + ## HITS:1 COG:DR1863 KEGG:ns NR:ns ## COG: DR1863 COG1459 # Protein_GI_number: 15806863 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Deinococcus radiodurans # 13 398 13 405 406 145 26.0 2e-34 MRAFIVKFMTPKGEEKNCILQAENRGALKTLAEQQGWRILQIREKKSIWKKLHTRTLSGT QLIFWFQQMAVLLSSGIPLVQAWTLLCRDWRKAGEKQCLQRGVFRLEQGISVTEVLEESE LFPVMVIPMVRAGEQSGQLAEIFQLLGTYYTYVEKQKQGVLQALLYPAFLCCCALGAAIF AIFFLLPVFENLFSQMNAPVPPLTRGLLQVSHSIRAYGPEILIGLGVLTVAVYGYSQQSQ RRQALTMRLWRIPGVRKLLLMFSWQRCCQLLAIQIRSGIPLLTALSEAASAVPISGFRRH IHWLCLRLEGGESFSAALAKSQVHLPYVSAMLAIGEESGQYDRAMQAVADYYRWQLTVAV ARFRRFLGPAALLMVGGIIGLLVCCLVLPVLDMITTMSL >gi|290780885|gb|ADGP01000023.1| GENE 79 76867 - 77262 400 131 aa, chain + ## HITS:1 COG:RSc3106 KEGG:ns NR:ns ## COG: RSc3106 COG2165 # Protein_GI_number: 17547825 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Ralstonia solanacearum # 14 122 22 138 156 67 36.0 9e-12 MQQCSARKKRVRNGFTLLEMLIVVSIIMVLATIAIPKFSSAGKTAKIAKIQADIHTVSNA AALYELENGKYPSDVATLLKKDKTGKTYLQTEPKLPDGSSYKIREDGIVSGTYDNKVYST GSQEPVRMPGQ >gi|290780885|gb|ADGP01000023.1| GENE 80 77285 - 77629 139 114 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWENIWFACIGMVTVYIFLYRLSILLDSRPCDCPLGFIAWCGMVRRYDTAAMEYGVGRVR YLLSVMVLETARNRHGRYQIGDDTQLFLYGPGRGADALERIFFRPGMRVDRMAM >gi|290780885|gb|ADGP01000023.1| GENE 81 77666 - 78154 467 162 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969010|ref|ZP_06560545.1| ## NR: gi|290969010|ref|ZP_06560545.1| hypothetical protein HMPREF0889_1234 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1234 [Megasphaera genomosp. type_1 str. 28L] # 8 162 1 155 155 325 100.0 1e-87 MRVVVCKMGSGGNSDTAGKPVKNGYIFLLECLIAVAIIMSMATLAAPIYQKQQKEFVINA YARQLAMHLQVVRTYDFTAPKDKTANIVFQENSYTVHGAGPQWDGSYPCPEGIYIKWKRR NKISFSLHGRGSGTETFYICNKDSTYNMRVVVASQTGRIRLE >gi|290780885|gb|ADGP01000023.1| GENE 82 78147 - 78503 383 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969011|ref|ZP_06560546.1| ## NR: gi|290969011|ref|ZP_06560546.1| hypothetical protein HMPREF0889_1235 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1235 [Megasphaera genomosp. type_1 str. 28L] # 1 118 1 118 118 230 100.0 2e-59 MNKKNGFLIVDALAAACILVCTMVPAMVAVHRALAVYTRCCRQTVLLEVTQNEIEKWRGG YTHQDGQEAAYAQGKEKYTVRFFIQPAMEGWEKREVEVTNDAGETQHLYYLARKEKKG >gi|290780885|gb|ADGP01000023.1| GENE 83 78448 - 79002 559 184 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969012|ref|ZP_06560547.1| ## NR: gi|290969012|ref|ZP_06560547.1| hypothetical protein HMPREF0889_1236 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1236 [Megasphaera genomosp. type_1 str. 28L] # 24 184 1 161 161 320 99.0 3e-86 MREKPNIYTIWQGKKKKADGFILLEVLIFFVLALFLISTMLTCSLQTIRYVRYGEVWEEM MRQRWVMNDTFYSELHNSIKTITEYSLLALYDGEREWRCHSISGGMYKWLSNHDDHPYIR GDWGRDVSSRVFVEPIDPEKKFFFKNKEMVDISMFYRDRDLKIYWPCHLIITPWCVEWRQ TAEK >gi|290780885|gb|ADGP01000023.1| GENE 84 79024 - 79467 333 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969013|ref|ZP_06560548.1| ## NR: gi|290969013|ref|ZP_06560548.1| hypothetical protein HMPREF0889_1237 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1237 [Megasphaera genomosp. type_1 str. 28L] # 1 147 1 147 147 303 100.0 3e-81 MRKNGFLTVYTLWVGLIMVFLASSTCLLSVQFLKQIPYRRQCVQMDYDVQAVLRDCVEEM QGQSMAKKREFLQAPMRRCQALHPEYEVQGEEMHYDPIFFGYPTPGYVSVRIHDTKRHIW RWGSLKVQTQKEADGSYKTIILHGVRD >gi|290780885|gb|ADGP01000023.1| GENE 85 79486 - 80250 756 254 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969014|ref|ZP_06560549.1| ## NR: gi|290969014|ref|ZP_06560549.1| hypothetical protein HMPREF0889_1238 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1238 [Megasphaera genomosp. type_1 str. 28L] # 1 254 1 254 254 524 100.0 1e-147 MKSKKIILWPAADEVYILAMYLNRCGTVKGYEGFTVSCPTRWLQDAQRTEAVMQKLRATY AWKNCHISLVVGGEDLIWKQVSLPVKQKEQAGQLSCWELDTKEENIGYTYDVMRISEADT AGMYTWILGAYPENRIYSLCVSLQQQKNKVDAVDALPCCLARQAGGHTGTVYLHEGHTLH AAYIRGGVPLTYGTMRELPAGGRALLQERGQSEQDDFILWFDEETQVWQTNPLFTWEERC RAYGLSFPVGVLTR >gi|290780885|gb|ADGP01000023.1| GENE 86 80265 - 80846 593 193 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969015|ref|ZP_06560550.1| ## NR: gi|290969015|ref|ZP_06560550.1| hypothetical protein HMPREF0889_1239 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1239 [Megasphaera genomosp. type_1 str. 28L] # 1 193 1 193 193 318 100.0 1e-85 MKIQLNLLPAAMVRARRQKIRRYRLGGMYLLLTAGLITGVLQGEYGSRCIRQQQQQFRLH GQYVQQSWQDERNRQEAWRRFAETYKKKHMDGLADTQLLVALSESKPKEAVFLSWQRDQA ETVITAQAPDAETARQWQEQLQQQPGIGRVSLSKTDASHTEPVSFQLTVKGETIHGQSGD PDELLSSAAHAQS >gi|290780885|gb|ADGP01000023.1| GENE 87 80788 - 81258 499 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969016|ref|ZP_06560551.1| ## NR: gi|290969016|ref|ZP_06560551.1| hypothetical protein HMPREF0889_1240 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1240 [Megasphaera genomosp. type_1 str. 28L] # 33 156 1 124 124 239 99.0 7e-62 MVNRGILTNFYHLLRTRSRRGEKWLLYGGLIGLLVVNGYVWRQIIHMHNTYMAWRQVTAQ STRYPKIPQGVWPPSEMTAENLSRQIEHTAKELDVSLLRVNAPEEAGSFYEAEIQTDFSR LLVYINTLTGKLPESTVQITQIERRNNEVAAIVRIG >gi|290780885|gb|ADGP01000023.1| GENE 88 81496 - 82107 812 203 aa, chain + ## HITS:1 COG:FN1312 KEGG:ns NR:ns ## COG: FN1312 COG0811 # Protein_GI_number: 19704647 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 8 198 2 198 202 92 30.0 4e-19 MDGLQYCLHLFKSGGVVMYPMLLLSIFTVAIAIERCFYYRGNRKDSKKFFVGIEHAVKEG QWEMASQFCEKFPTAISRIIANGLQHNENVDDMKDGFAEQLTVEAVGFRRYLDYLSAIVT ISPLLGLLGTVTGMIGTFSVLDNGAGASAITGGVGEALIATASGLCVAIVSFCVYTYFDH QLDTIITDTEKLCAIVLNERKEK >gi|290780885|gb|ADGP01000023.1| GENE 89 82119 - 82523 604 134 aa, chain + ## HITS:1 COG:slr0678 KEGG:ns NR:ns ## COG: slr0678 COG0848 # Protein_GI_number: 16329551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Synechocystis # 15 129 41 155 269 74 29.0 4e-14 MFTKLRTKRKPMFMIIPMIDIIFFLLVFFMMNSLQTIAQKALSVQLPQAQHASAPVQMPI IITIDAKGHITLDNKPVSIQEASVMMRQHMAENPEAAVVLQADRQTIHGQVVAVMDILKA AGVKRLAIAAEQKG >gi|290780885|gb|ADGP01000023.1| GENE 90 82531 - 83322 869 263 aa, chain + ## HITS:1 COG:no KEGG:Selsp_1719 NR:ns ## KEGG: Selsp_1719 # Name: not_defined # Def: TonB family protein # Organism: S.sputigena # Pathway: not_defined # 2 258 3 271 272 125 47.0 2e-27 MRRFSWKKAYACSAAIHVLFLGIVAFCVAGQVMHQEKQQMYVVDLDDGDMSQGSGHAGGG GGSNQLFPDKLSTREVAQKVENAQLRSTTTVPEATPATAAPQAAPATGSSTGHASAVGTA TGSGTGTGGGVGSGSGTGSGAGHGDGHGYGKGSGNGQGSGNGNAPGTGSSPFDKAGFRAR IDSHKQYPPMAVKRHLQGNVTIQTTLDGNGNCLGVAVVGSSGQPMLDSAAVRAARAACPF HNATKKTITVTTTVRFELADDDE >gi|290780885|gb|ADGP01000023.1| GENE 91 83467 - 83985 622 172 aa, chain + ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 162 1 162 169 90 31.0 1e-18 MKAIVLYSSRTGNTQKVAAAIRQGLPADTPCLPVSEAPASLAAYDCVFLGYWVDRGLPDA AAKAVLATLTNTHVALFGTLGANPDSEHGQMCVEHGNELVPKICHLAGSFLCQGAVDPKV IEMMYKQFPMGHPHGKSAARDALHAEAAKHPDGDDLARATQFAATVWRQIQE >gi|290780885|gb|ADGP01000023.1| GENE 92 83998 - 85677 2068 559 aa, chain + ## HITS:1 COG:VCA0909 KEGG:ns NR:ns ## COG: VCA0909 COG0635 # Protein_GI_number: 15601663 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Vibrio cholerae # 19 450 14 444 455 302 38.0 1e-81 MGLEELFESLTEEQQIFQFGVETDNPLAHAFPRKRVVHAGLNGTVVAPDESQAIWQEIMS KPPQEKGTQTAYIHIPFCKTKCLYCGFFQNGTDQAVEDQYIDALIKELEAAAVAPRLKDS LIHAVFIGGGTPTSLSPRNMARLLQAIQRCLPLANDYELTLEGRIHDVVPENMEVWFANG VNRVSLGVQSFHTEIRRNVGRLDDQETVLKHLENLCSYNQSANVIDLIYGLPGQDLDIWK EDLDLLMASGVDGCDLYQLNVFDGSDLNKAIQAGRLPAAATTEYQSAMFSFGKNYLAQHG YKRLNICHWSCTNRERSLYNTLARSAAPMFPFGSGAGGHVDGYSTMLHRIIQPYEAYVQM GKKPFMALMKQSPLEPIVEEVQAQFEMGAVNLQTIIAFDARLKDLQWVFDLWQKRGLLAF NGIQYELTEAGQFWQVNLTQSTLECIQFIMTGQNAIAVEKVAAQDSAKADAMVQAMKKMK EMYSGHGVEVMKKMAEMSGGHPSARKRGAMSGKKGAEAMKQMENPMGDMADPMKKMAEAM NRMSPEELQAVMKRMMGDD >gi|290780885|gb|ADGP01000023.1| GENE 93 86056 - 87393 1782 445 aa, chain + ## HITS:1 COG:TP0921 KEGG:ns NR:ns ## COG: TP0921 COG0446 # Protein_GI_number: 15639906 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Treponema pallidum # 3 445 2 444 445 499 56.0 1e-141 MSKIIVIGSNHAGTAAINTILDHYKEQEVVVYDKNSNISFLGCGMALWIGKQIHSGDGLF YATPEGLAAKGAKIHMNSEVTAIDPAKKTVTVIVDGVEKQDTYDKLILATGSNPVVLPVP GHDLENIQLVKLYQNAKTVIEKLQAHPDIKDVVIMGAGYIGVELAEAFERLGKNVVMLDM AERIMPRNFDIKFTDMMMDNMKKHNIQIRLGEAVQKFEGKDGKVCAVVTDKGTYKADMVI SAVGFKPNADLGGDLFERFANKAYLTNRKFETSQKDIYAIGDCTTEFDNSTGKESYIALA TNAVRSGIIAAHNACGTAIESLGVQGASGICIYNLKMVTAGLTVAAAEKAGIEVNYSDYK ATQKPAFMEVDNPEVTIRIVYRKKDRVVVGAQLASTYDMSAQINMFSLAIQEKVTVDRIA LLDLFFMPHFNEPYNYVTMAALSAK >gi|290780885|gb|ADGP01000023.1| GENE 94 87901 - 88911 1265 336 aa, chain + ## HITS:1 COG:all2315 KEGG:ns NR:ns ## COG: all2315 COG0059 # Protein_GI_number: 17229807 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Nostoc sp. PCC 7120 # 1 329 1 328 331 428 67.0 1e-120 MAKVYYDKDVNWDVLKDKKVAVIGYGSQGHAHALNLKESGVSVVVGLYEGSKSAAKAEAD GLPVASVAQAVAAADVTMVLIPDEKQAAVYQTEIAPHLKPNSALAFAHGFNVHFKQIVPP ENVDVFMVAPKGPGHLVRRTFVEGGGVPDVFAVEQDASGQCFDLALAYARGIGGTRAGVL QTTFREETETDLFGEQAVLCGGICQLITNGFETLCEAGYQPEIAYFETFHEMKLIVDLMY EGGMAKMRHSISDTAEYGDYTAGKKVVTEDTKKAMKKVLADIQDGTFAKEWLLENNAGGR AHFLAMRRQHAEHPVEVVGAELRKMMPWLHNNDQKD >gi|290780885|gb|ADGP01000023.1| GENE 95 89000 - 90700 1716 566 aa, chain + ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 559 8 559 564 547 49.0 1e-155 MKMTGAQALIECLKREHVEVVFGYPGGAVLTLYDELYKAAFPHILTGHEQGAVHAADGYA RATGKAGVCFATSGPGVCNMVTGIATANMDSIPLVIISGQVATSLIGRDSFQEADISGIT TPITKHNYLVKEVSELPRVLKEAFFIATTGRPGPVLVDIAKDVFDAECTYTYPENVHLRG YTGTYEGRVSDLDKAVAALAAAERPVFLTGGGIIAANMSPMLRHIVHTLQVPVVTTLMGK GAVSDDYAYHLGMVGMHGSYAANMAVTECDVLVAVGARFDDRVTGVVANFAPQAQIIHFD IDKVEINKIVHAHISVNGDLRWSLPLLADKLSASSADFAMQFKEWRETVRQRHSRHPFQT RQVPHTISPQKLFAAVRDCTDENTIAVTDVGQHQMWAAQFFNLSQPRQFLSSGGLGTMGY GLPAAMGAKVGCPQKTVVLFTGDGSIMMNCQEFMTLAKYGIAIKVIVLQNNVLGMVNQWQ RMFYEGHYAASVLADNPDITAVSEAMGVRGWKVTEPEELTTVVREFLAAEGAGVLNVRIP EDENVYPMVPGGKRLDQMVLGGKTVS >gi|290780885|gb|ADGP01000023.1| GENE 96 90697 - 91197 689 166 aa, chain + ## HITS:1 COG:MT3082 KEGG:ns NR:ns ## COG: MT3082 COG0440 # Protein_GI_number: 15842560 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 5 159 8 160 168 110 44.0 1e-24 MRQHLAILTDNKPGVLTHVAGLISRRAINIECINAGYTEEQEVTRINIVVSVESREELAR AVNQLAKLIDVIKVVNLDDRPFVGCELAMIKVGYENSSQREELANMAALFHAKVVDVQLR SLILQVAGKEDRIDALLRMLQAYDVLEIARTGQISLSRGEVPVKNM >gi|290780885|gb|ADGP01000023.1| GENE 97 91218 - 92870 2159 550 aa, chain + ## HITS:1 COG:PAB0895 KEGG:ns NR:ns ## COG: PAB0895 COG0129 # Protein_GI_number: 14521553 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Pyrococcus abyssi # 1 550 1 550 551 645 60.0 0 MRSDAVKKGSTRTAHRTLFHAMGYTDEELSKPLIGVVNAFNEIIPGHIHLREIAQAVKLG VAAAGGTPIEFPAIGICDGIAMGHAGMKYPLASRELICDSIEAVANGHAFDGLVLIPNCD KIVPGMLMAAGRINIPAVVVSGGPMLAGRHKGKDISVSTMFEAAGKVESGQMSPEELRTM ECQACPGCGSCSGLFTANTMNCMTEVLGMGLPGNGTIPAAYTGARRMLAKQAGHVIMELI RKDIKPRDIMTRQAFENAIAVDMAIGGSTNTVLHLPAIAHEAGVELPLEVFDEISGKAAY ICKMSPGGTYHMQDLNEAGGINAVMKELTKIQLIHIEAQTVTGSIGDRIAQAVNERPEVL HSVENAYMHKGGIAILKGNLAPLGSVIKESAVEPDLLTYTGQAKCFDSEEAAIEAILGGE IHEGHVVVIRYEGPKGGPGMREMLNPTAVITGMGLKVALLTDGRFSGASRGACIGHISPE AMEGGPIALIEDGDVIVIDIPQRKLELQVDAEELARRKAAWKQPEPKVKTGYLSRYARMV TSAYTGAVLQ >gi|290780885|gb|ADGP01000023.1| GENE 98 93262 - 95922 2778 886 aa, chain + ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 884 1 881 881 993 52.0 0 MKWNKERLTSYAPQEMEMKWYEYWEKNGYFHQEPENEKEAFSIVMPPPNVTGQLHMGHAL DNTLQDILIRFKRMQGYHTAWIPGTDHAGIATQVKVEQQLAKEGKTRYDIGREAFLERVW AWKQQYGDRIEQQIRRLGSSCDWRRKRFTMDETCAAAVREVFVSLYEKGLIYQGERITNW CPHCHTALSDIEVDHEEENGHLWYIKYPVVGEDAYIMIATTRPETIMGDMAVAVHPEDER LRTYIGKKVRIPFVDREVPVIGDTYVDRNFGTGAVKITPAHDPNDFEMGQRHQLPSLMIM NLDGTMNAEAGAAYAGMTREACRQAVVKELEAMGLLDHTEELRHAVGHCSRCHTTIEPFS TKQWFVKMKPLTAAALNAVTTGKTQFVPDRFAKIYNHWLENLHDWCISRQLWWGHQIPAW YCDDCGQTTVSREDVGTCAHCGSTHITRDPDVLDTWFSSALWPFSTQGWPKKTADIQKFF PTSVLVTGYDIIFFWVARMMFMTCEFMKDIPFKHVFIHGLVRDSLGRKMSKSLGNGIDPL GVCEEYGADALRFTLVTGNTPGNDMRFYMERVEANRNFANKIWNASKFVIMNLTEYDDAF VPEAADLTLADRWILTMLNETVQKVTRDLDRFELGEAADTVYNFIWNLYCDWYIELTKKR LYTSTDERNRRTAQFVLVHVLTRTLELLHPFMPFVTEHLWQHLPHTGESIMLAPWPQVQE QWQFTEDAAQMNVLMEAIKAVRNLRAEAKVPMGKRAPIMLKGGTAALTRLLQTYESYFHT LAFADTVTLLKETDGKPENAVVAVVPGVEIYLPLKDLIDVEKELARVQKEEAKIIKEIAR LEGKLQNAGFLSKAPAEVIAKEKEKLATYQEKMTSLTQRLQELKNL >gi|290780885|gb|ADGP01000023.1| GENE 99 95935 - 97239 1443 434 aa, chain + ## HITS:1 COG:CAC2398 KEGG:ns NR:ns ## COG: CAC2398 COG0285 # Protein_GI_number: 15895664 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Clostridium acetobutylicum # 1 428 1 431 431 296 40.0 5e-80 MTYEEAVSYVENASTFGIQLGLRRITELLRRLQDPQKKYKTVHVTGTNGKGSVTAMIASV LETAGYEVGRYTSPHLESYTERIHVNGKDISEDAFATAVQTVAKAVESMQAEGWERPTAF EMLTAAAFWYFAERKVAYAVIEVGLGGLLDSTNVITPEVAVITNVDLDHMKYCGATIAEI AVQKAGIIKEGVPTVTTATGEALAVIARTAYKKHSRLYASDHSFFVTADSLSDPLRGQTV TVREAYGFTVSATLPLLGEHQKRNCAAAMMALLLLARTQKSLTRTALEKGIQQVRWPGRF QVLQVQGRTVVIDGAHNPAGIHAFCQTYDRVFSKRPRVFVFSVLADKAYPQMVQELFHAD DIVFCAPAPTPRTADPQQLAALLPCAATACENLERAWEEAFHALTEDAVLCVVGSLYMQN NIRKYIQQKYGLSI >gi|290780885|gb|ADGP01000023.1| GENE 100 97448 - 97798 458 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969032|ref|ZP_06560567.1| ## NR: gi|290969032|ref|ZP_06560567.1| hypothetical protein HMPREF0889_1259 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1259 [Megasphaera genomosp. type_1 str. 28L] # 1 116 5 120 120 176 100.0 4e-43 MTRGQEKTIQDIKIAGDKKTMDETGGQKEKYGVHRETRKCPAEKAARKREGKARFVKMWK QWLMDIHKAEVEIAREEGVSQQAFNAKMRNATIRYTELAAIVERYGYTVEITKKKI >gi|290780885|gb|ADGP01000023.1| GENE 101 97939 - 99204 1227 421 aa, chain + ## HITS:1 COG:all5073 KEGG:ns NR:ns ## COG: all5073 COG3307 # Protein_GI_number: 17232565 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Nostoc sp. PCC 7120 # 118 409 145 452 475 78 27.0 3e-14 MNGATYYYRYRRETPQEQARLRVVYALTGTAFFLPLQLAIMELFFILAVIAAVYYYKKYG GFRRPTQPLQVPAACFAGAALLSLIGSEHSAFGLAFYCFTILQYIILYWLIQSFIGSKNE RLRLLIAVVAAATVVGIYGMIQFFFLLTPASAQWVDKAAFPLLYRRMYATLYNPNLLAQF LLMTLSVSVFLAGSRRRPAYRRVLYGVSLLLAVCTVLTYSRGAWLALAALTVYLGAVRDK RWWWLLLVVPGVLTVYHGGLTYRLLSVFTTHSQDTSVIMRWSMWKSALQMTAAHPALGIG WGEFKFVYPHYNWLIRHAGMTIYHAHNMFLNILAETGMGGIFFFLWFFWGHLYYAGGQGT VHSWQSETYIPELMGSVILVTFVTGCSDFDLFSTQISMVFWLICGIFASCYEEKMRKKFA K >gi|290780885|gb|ADGP01000023.1| GENE 102 99287 - 99949 1059 220 aa, chain + ## HITS:1 COG:CAC2713 KEGG:ns NR:ns ## COG: CAC2713 COG2344 # Protein_GI_number: 15895970 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Clostridium acetobutylicum # 1 206 1 206 214 160 40.0 2e-39 MKHKKAISDAVIERLPLYYRDLLLLKDAGIDIISSERLGERLGITPEQIRKDLTCFGAFG KKGVGYYVNELCQQIVEIIGLQQHWKVGIAGIGHLGWALANYKTFERLGFRTTGLFDVDH RIIGQNVGGVIVTPIADMAAVIAREGIQIGIITTPAAVAQQVADEMVKAGIKGILSFAPL RLTVPDNIFVFREDLSIGLSRISYYLTNCSGKAMTDADRT >gi|290780885|gb|ADGP01000023.1| GENE 103 100089 - 100529 534 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238926959|ref|ZP_04658719.1| ribosomal protein L13 [Selenomonas flueggei ATCC 43531] # 6 146 1 141 141 210 69 4e-53 MKTTFMANAGNIERKWFVVDADGLTLGRLAAEVAKILRGKHKPTFTPHVDTGDFVIVINA AKVKLTGKKLIQKTYFHHSGYPGGSKFTQAGHLLEKRPERVVEMAIRGMLPKNKLGEQMY RKLNVYAGAEHPHQAQQPTELKLDIR >gi|290780885|gb|ADGP01000023.1| GENE 104 100548 - 100943 512 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238926960|ref|ZP_04658720.1| ribosomal protein S9 [Selenomonas flueggei ATCC 43531] # 1 131 1 130 130 201 77 1e-50 MAETTYCYGTGRRKTSVARVRLVPGQGKITVNKKELTEYFGRKTLELIIRQPLVLTGIAD QYDVIADVKGGGPSGQAGAIRHGISRALLEVNSEYRQSLKKAGLLTRDPREKERRKYGLK KARKASQFSKR >gi|290780885|gb|ADGP01000023.1| GENE 105 101154 - 102689 1752 511 aa, chain + ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 197 511 2 316 316 443 67.0 1e-124 MEQKELVIVVDFGGQYNQLIARRVRENHVYCEVYPYQKAWEEIKKKRPQGIIFTGGPASV YDENAPRMEAAIFQAGIPVLGLCYGMQYMAQTLHGTVQQATAREFGKTVITVRNDSPLFQ GLDARQTVWMSHRDYVAALPEGFESIASSANCPVAAMQNKEKKLYALQFHPEVLHSEHGK EMLHNFLFAVCHCTGTWTMANYAKTAVADIRRTVGNGKVVLALSGGVDSSVAAALISRAV GKQLTCIFVDHGLMRKNEGDEVERAFQSSGMNFIRVDAAARFLGKLAHVGDPEAKRKIIG EEFIRVFEEEGRKIGAVDFLAQGTIYPDVIESGAGDAAVIKSHHNVGGLPAVVDFKGLIE PLRNLFKDEVRELGSELGLPDYLVWRQPFPGPGLAIRVMGEITAEKLDILREADAIFREE IVKAGLARSINQYFAVLTANRTVGVMGDFRTYDYTLALRGVTTTDFMTADWARIPYDVLE TVSGRIVNEVPHINRIVYDITGKPPATIEWE >gi|290780885|gb|ADGP01000023.1| GENE 106 103198 - 105366 1161 722 aa, chain + ## HITS:1 COG:FN1923_2 KEGG:ns NR:ns ## COG: FN1923_2 COG0338 # Protein_GI_number: 19705228 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Fusobacterium nucleatum # 417 715 1 299 304 356 65.0 8e-98 MASLNVTDVIKELDISKSYLYKLIDKENILIPRSDTGRYFWDKNTVEIIKRFLHIGDLQD KDDIDFLISKLGLKQSFINNRRYLGNKYSLSDFIRKTVDENCKGVNIVIDIFSGTGAVAN TFRDKMLITNDLLYSNYISNYAWFGYEKYSRKKIIELIYDYNQVKTKENNYMRENFADTF FSADDCSKIGYIREDIEAKYKNKEINFKEYAILITSLLYAMDKIANTVGHYDAYRKNVDF EKKLVLNVLLPEEMVNSNNICYNLDANKLIKSIRGDLLYLDPPYNSRQYCDAYHLLENVA RWEKPEVYGVARKMDRTSLKSDYCMITATKAFEELIERADTKYILLSYNNMSDKGNDRSN AKISDEDIMRILSKKGKVTIFELDYKSFSTGKSDIKDNKERLFLCEVFSEEKKKMNIPCP FNYIGGKFKLLEQLQPLFNEKEVFLDLFAGGGNVGINSSSSKVIFNDTNEHLIDLIEFIK DTDTDALLKQIDNIIEAYNLSNTSLYGYSYYDCDSSRGLAEYNKGKFLKLRDDFNVKVLA GEIDYLMLYVLMVFSFNNQIRFNRKGFFNLPVGKRDFNSKMRSKLVLFSEELKSKDVRFM KKDFREISLDDFSQETFIYCDPPYLITNATYNENGMWTEIEEKALLEFLDEANEKGFSFA LSNVLESKNRRNDILYNWIESKGYSCNRLNKSYSNSSYHRKNKNSISEEVLITNYPVDWR NE >gi|290780885|gb|ADGP01000023.1| GENE 107 105367 - 107349 684 660 aa, chain + ## HITS:1 COG:no KEGG:SOR_0978 NR:ns ## KEGG: SOR_0978 # Name: not_defined # Def: AlwI restriction endonuclease family protein # Organism: S.oralis # Pathway: not_defined # 1 659 1 659 660 1023 80.0 0 MVNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFYNEVIKESRWNWNNELQEKYY DFIKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDAGSELLKITSSGDFKTNNV FNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVIKCLTELEFLSYDEFTYFVPLIRDDESA KQIISDIKLYREGKILPEEIIYKRLMQMDNYKLAQEEFIASDVDENLICLVGMNRKSRSY DKPYYKLYENLKKVFLDGKSDYESLLNSAKNINQKPGTLWRSLLFKTINIGVVRKNGKAS IHKQCPFLNCANEKELKEVFFKYLHVFKAMATLSDYFDLNRRYFNVTDTLIFEDRMVKLD MIPKYYFKEIIDILYKETFSRDDNLSIDVPLETISRAFELDMSKVYAALSKDLGITIKSP EQAATYVNDERYRRFNILIDKKFNDSVLVELLNCFEKRDDKRIEELVTDEAAIPTIFEYI LGIIWYKVSEGQGNILDFMKLSLEANLLPKTHAAGGYADIIYEYEACTSYPKHSLLLEAT LADGNNQRRMEMEPVSRHLGDYRIRFNNPFDYSLFVSTYLDKNVISDFRYRKIIPYTRDE ETITGMKIISMDTDSLKKIIENKVKYKYLYEVFDKYHEMPLETVDWHDGMIKEATGEYKV >gi|290780885|gb|ADGP01000023.1| GENE 108 107373 - 108140 305 255 aa, chain + ## HITS:1 COG:no KEGG:SGO_0555 NR:ns ## KEGG: SGO_0555 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 255 2 258 283 226 49.0 5e-58 MEGIIERKNGETTILEVQYLSEDLKKKIQDELVEICHGEYALVSGFNYHSFDETVKELVN HRIPSNINRKVGVIGELLLNVLIREFTDIKIVSPFFNLEERHVKKGFDIIAVDSNKDLWI IESKAGELGKLKTSTEKVCERINAAKRDLDTRLNMHNSQLWLNAVNSVRGALDDTSEKNT IVNILNKNSSSCSSNDKNVILGGTVFCIFNSTIDSIELRKLHNSILSSNKFSKLKLIAIQ KQTYQAIIDFLVTLV >gi|290780885|gb|ADGP01000023.1| GENE 109 108736 - 110598 618 620 aa, chain + ## HITS:1 COG:no KEGG:SGO_0556 NR:ns ## KEGG: SGO_0556 # Name: not_defined # Def: DNA helicase-like protein, putative # Organism: S.gordonii # Pathway: not_defined # 1 620 205 825 826 624 54.0 1e-177 MYSDKDNEIIAVLTQERLLRLLQNNPNLKFDLLVIDEAHNILDDFSDENRRSVILASVII ICKKRKENLVCKYLTPFLRSKESLKIECLPNVDEWYSVVENVKSEMFYFYDLENNKKVLL DQYSTTKDKLIDLQVNELGDDEDVVITYCDNKNIIYLNSPKKLENFAFKLFSKLPERQIL RLNKAARDLREYVHEDYKLADYIEKGVIYHHGSIPEPVRYFIEDLYVNVPEIKMLIANST LLEGVNIPATKMFILDPCRGNSYLSPSSFKNLIGRVCRFGEIFNNSTGDLKYLLPEIHIV KGGYCRQNFKVENFVKGRKILVEDYDKIFDDIKNPLLVNYNSDEAKKKKAEDILENISHS DAITVNNSNKAKTKVGQLCFENNINIFNILEIEKQIDNEIENVNIAKSIDTVFNIIDYLF FSKINDSNGEYNNLKRLREHEAQSFYKMLINWRIMGFTMKVMTDEMVGYWNTLREEQSRI VYVGKWGDKTRGGHREYWTDITEKDEYEKVNLAIVRLKEEYDFIDNEIVKYIEVLYSLEL IEESLYLKIKYGTDDKTKIALLNCGISSILSKLLQEKYSDMFEADIGNSTVTFSKNLISE MLKNSENGILISEVKMNAKE >gi|290780885|gb|ADGP01000023.1| GENE 110 110585 - 110743 110 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKNKLEFHACNMLAKNRRNRNKLDNKAKFNNKNFDFTPFTQKDINGHIEWE >gi|290780885|gb|ADGP01000023.1| GENE 111 110859 - 111125 148 88 aa, chain + ## HITS:1 COG:no KEGG:CPR_0648 NR:ns ## KEGG: CPR_0648 # Name: not_defined # Def: IS1470, transposase # Organism: C.perfringens_SM101 # Pathway: not_defined # 1 80 1 80 350 77 50.0 3e-13 MDNTNHNTETRTNKHLSLKARFYIESRLRLGVSISSIAADLQRSRTTIYYEIKRGTVDRI KKDKLVSLYFAETGQLAYKKAEQDHFLA >gi|290780885|gb|ADGP01000023.1| GENE 112 111233 - 111892 293 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 1 211 104 315 317 117 36 3e-25 FTLDMMVCTKTLYNYVHEGLFLPILDFPCIVKRKRTKYIQRTRKRNLGLSIDDRSPAVDE RTEFGHREVDTIRGKKGKEESVLVTLAERKTRFNVQLLANSASASDVTKAIVAWLGTMVM ESVKSITSDNGSEFANLIEGCRTICPVYFAHPNSPWQRGTNERHNGLLRRFIPKGKALSE LSIETLEVAHNWINQLPRKILEYKTPEEMFIEEILKLLC >gi|290780885|gb|ADGP01000023.1| GENE 113 112015 - 112893 731 292 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969045|ref|ZP_06560580.1| ## NR: gi|290969045|ref|ZP_06560580.1| hypothetical protein HMPREF0889_1271 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1271 [Megasphaera genomosp. type_1 str. 28L] # 1 292 1 292 292 530 100.0 1e-149 MAKTIKFNLILDNYPVRNIEGLQEHFSIEDMLKYFENGLLLRWLNVRGYDEQYAAVEAID KSFDRKEIVTSLVKIFEVGEMDIADIEKAIGILTYLDEEKELNAIYKENAYAKKQIVDDY HSGYTALIMHMEENKDNIALLKADAIQMEREYFGLFELNYYELYFRLVESAPKAIFAILT RNAFRKYWIGEKANEEIYESIKTSLLVSASAKKILGADLKVVKRNTQAMWDPIERAEVKV MVISIVRGTFIKNAGNFSEKLGAEDVNEKLLKFRGLEYQCNNEKHELLYMEV >gi|290780885|gb|ADGP01000023.1| GENE 114 112896 - 114524 834 542 aa, chain + ## HITS:1 COG:all4296 KEGG:ns NR:ns ## COG: all4296 COG0464 # Protein_GI_number: 17231788 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Nostoc sp. PCC 7120 # 84 484 85 479 503 300 39.0 4e-81 MKNSARDLLSAYVDSLYPIIYINHFDFKVIDEIITDITDNRKIVEYNNGLGIVDFKAKST MKECDLYNFLNLVKDDGYEHDMFIVLKDVHSQLDKPEIVSLLKYIAERNLYNENYNASVF IISSKLCIPDELEDLITVFDMPLPSVSEIKNIMVNFTKDLEIDVADDVLSEIALSFKGLN EFQVKQILNLAYQDGGYLDFDDKRLILSQKEQLIKKAGLLEMIPVNESIEDIGGLENLKE WLYKKERVFNQLDKAIKFGVDIPKGIMIVGMPGCGKSLAAKATAKLFEIPLVRLDVGRLL GKYIGESEENMRKALKLSEAISPCVLWIDEIEKAFSGVGSSGGASDVTTRLFGQFLTWMQ EKENTVFIVATANDISKIPAEFLRKGRFDELFYVDFPNDEERRKIIEIHLKKRHKWNKDL DIISLVKLTSGYNGADLEAIVKDAIESCFIEGREQLTTEDLKSAQKNIKSISSTLEKRIK EIKEAVKDMDLKPATQSEMTFEQGEKPVKTIRDRFEESRKKHEESRKKHEESRWPWTVIL KE >gi|290780885|gb|ADGP01000023.1| GENE 115 114622 - 116139 1313 505 aa, chain + ## HITS:1 COG:no KEGG:Alvin_1447 NR:ns ## KEGG: Alvin_1447 # Name: not_defined # Def: hypothetical protein # Organism: A.vinosum # Pathway: not_defined # 19 496 39 519 529 168 31.0 6e-40 MEKTEEIYEFDFSEKVLSEEEAKDVFKIQRQFLESYAASKDKMPVEEWLPQELQKQLPEK TSEEIEKMSTEIINSLKVTEDMKVSQQKAIAAGRSKNSWFASTILQSTSQMSAQESARYL QSLDDAVKNANVAMHETITTKGSGYIIPSMNPNLDGFIAEQHHVNSFNMNAAAKGSGLRA EVQPLKPGETYTKNGFDVIIKDASGKRIHQYQMKYGATAEDTIRMINSGNYNNQTLVVPE EQVAAVQEAFPNKTVTSTIGDGDVSSKPLTKEQAKELQEKSQTGNFIDADWNDYVAKDIA IGIGKQTGYACLQGAAVGGGMAIATKVWNGEPIDGEEVIETAIVSGADFGVKTATAGALK AASEKGVLKVIPKGTKGSTFANIAFVAIENVKVLGKVATGELTAKEGLDAMEQTTVSCVA GITASTKGAAIGATIGSVLGPVGTAVGGFIGGTLGYIAGSKVAQTIVKGTQKVRDKAVEV VKSVGSAIASGAKSIVRGFASLFGF >gi|290780885|gb|ADGP01000023.1| GENE 116 116337 - 116675 255 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969048|ref|ZP_06560583.1| ## NR: gi|290969048|ref|ZP_06560583.1| hypothetical protein HMPREF0889_1274 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1274 [Megasphaera genomosp. type_1 str. 28L] # 1 112 1 112 112 198 100.0 9e-50 MDSILNKLKSCNSIELLRTVGTIEGIVKAINKEIYPLTVNALTYEELYQAVNKLNKHWDR VESDDYFKNENLKYIFALTHMGGEDRNKMLRLTDELYENKDKAKNGTMKFQK >gi|290780885|gb|ADGP01000023.1| GENE 117 117001 - 117465 394 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969049|ref|ZP_06560584.1| ## NR: gi|290969049|ref|ZP_06560584.1| hypothetical protein HMPREF0889_1275 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1275 [Megasphaera genomosp. type_1 str. 28L] # 1 154 46 199 199 247 99.0 2e-64 MNNAPNKDVKQYGDIDYLSTPHIQKEIAFRKEQPRSELEREKLEYASNCLKAFSDNYQLN KERNIENGRIVKERSKIGKKVIKERGSIVSEISGEPLNGDACVHHKNRVADKPEEAFDDD KLTVIKDNEHKEFHSSSYTQDKKGFEEYISKKNK >gi|290780885|gb|ADGP01000023.1| GENE 118 118095 - 118349 142 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLLIPLFPIRYIGSLQSASTVIIIAHLRQYHRVIYLFAKVMKTLILPINGNHFYKSIYD RYFMKLYSVFLPYSLIIKTNVGLT >gi|290780885|gb|ADGP01000023.1| GENE 119 118304 - 118414 59 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRYSESETMELKETYTDTNIKEVVSPKDATSFLVQ >gi|290780885|gb|ADGP01000023.1| GENE 120 118512 - 119513 918 333 aa, chain + ## HITS:1 COG:NMA1500 KEGG:ns NR:ns ## COG: NMA1500 COG0270 # Protein_GI_number: 15794400 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 5 324 23 334 337 226 41.0 5e-59 MYRAIDLFAGIGGIRLGFEQAFGAEMTTVFTSEWNKKSQETYLANFGEEIHIFGDITAID ERNIPPHDILLAGFPCQAFSLAGKKRGFEDTRGTLFFDVARIVNYHKPKVVFCENVKNLV NHDRGKTFKIINQTLQDLGYTVFHNVLNSKDFGVPQNRERIYIVAFREDIAPNTFRFPEK TDDTKVIADIMEEKEPSSKYYLSDVYLASLRKHKQRHQAKGNGFGYEIRGVHSVAGAIVC GGMGRERNLIIDKRLTDFTPVTNIKGKINREYIRKMTPREWARLQGFPDEFKLVVADTHL YKQFGNSVTVPVIKAIAKKIKQQLAGVSSTDCV >gi|290780885|gb|ADGP01000023.1| GENE 121 119787 - 120668 489 293 aa, chain + ## HITS:1 COG:lin2373 KEGG:ns NR:ns ## COG: lin2373 COG4823 # Protein_GI_number: 16801436 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Listeria innocua # 4 293 6 288 298 134 32.0 2e-31 MTLKPALNYEEQITKLKVDHNLKIKDEIYATEILKKVNYYRLSGYGIVLKKYNNKEHYKD DITIEHLFNLYCFDSQFKNNLIRTIEQIEIELRAQIAYHLAITYGSEVLMHEDNFIHKTN KRGQTIYSIINEKLSNEIDRQKNKPFVKHHLRKYDGKFPIWVSVELMSFGNLSSLFSILK DKDQKVISGYYKTDPKYLKNWILCLVEVRNICAHYTRLYNMPLRETPRLYSENEQYKGKQ NKIFPILLIIKRILNSNDQWESLLKDLENTFNKYQGYFNYKFMGFPTNWKDIL >gi|290780885|gb|ADGP01000023.1| GENE 122 121868 - 122341 514 157 aa, chain - ## HITS:1 COG:BH0033 KEGG:ns NR:ns ## COG: BH0033 COG0590 # Protein_GI_number: 15612596 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Bacillus halodurans # 4 152 5 154 159 171 56.0 5e-43 MTLDELYMGKALAEAETAFAVEEIPIGAVIVHENTIIARAYNLRETLPCATAHAELLAIE KACRHLNRWRLSGCTLYVTTEPCPMCAGAIVNSRLDRLVYGCPDPKAGAVHTLFHLTDHP RLNHRVAVTAGIRADECADLLRRFFRLRRKKRVPPMP >gi|290780885|gb|ADGP01000023.1| GENE 123 122460 - 123134 863 224 aa, chain + ## HITS:1 COG:VC2382 KEGG:ns NR:ns ## COG: VC2382 COG2860 # Protein_GI_number: 15642379 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Vibrio cholerae # 7 211 40 233 239 117 39.0 2e-26 MESIWWHIFDILGTAAFAYSGALVAVSRRMDIFGVFMLSAATAVGGGIVRDMLLGNVPPV AFRTSLYGGIIIAAMAGAMVTVWNIRAKRRFSRMMAVLFWLYTICDAVGLGAFSVTGTLL GCHYYPQYGLFAVMLGVWTAIGGGIIRDVFAAKIPFVFRKEVYATASVLGCVVLTGCFYT SFLSLPPASVLACTVTIAVRLLAVKRHWNLPLIHRKRHRPYFFR >gi|290780885|gb|ADGP01000023.1| GENE 124 123158 - 124990 2208 610 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0419 NR:ns ## KEGG: Vpar_0419 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 528 1 529 604 503 47.0 1e-141 MRRVWRLVLAVVLVCGGSAVSTAKTILYVPQDDRPVDLAYTTETARAAGYTVLTPPAAYL SGASFTGNAEALASWVEAHAGQADAMVLSMDSLLYGGLADSRKHGEAMPVLQRRLQRVER WHRQYAQVPIYAFSTVMRSPWAGGRGVEPAYYLTYGRSIYSLAALQYKWHTGTLSAADKQ AMFQLMGQIPLEYLQDWYSRRQKNMVLNERLIEDARNHVFTYFCLGHDDNSQHTQSSLEV AYLEKIAAAAGVTDFASFPGADQLGLLLIARAHNDFQQRHPTVQVLYPLGTGGETVPRYD GQAVEDTVAAHIQAIGGREVTTGRPDLLLAVYTPLLRGDGEAATVDNVPIMSASARTFLQ QIRRATRQHIPVSIVDLTFSNGSDNTLLYGLYTQHMLYTPTAYNGWNTAGNAIGYGIGQG ILAASMTAADRKNMLAVQYLDNWAYQANVRDYVQRMQLKMQRHVWEPCYAEEMTELQSLA KEQVQRYARLYLGLDPHTVEVTLPWRRLFEVAVQIRPQGDVPEEAQVRRQLREDRIKARE ERVRAAAAALTQADGNEPADGKTPAQLAARQAYEDAVAEWQRETVAAADARTIQEEEERA QTLRTWQPRR >gi|290780885|gb|ADGP01000023.1| GENE 125 125155 - 125334 286 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371279|ref|ZP_03854763.1| SSU ribosomal protein S21P [Veillonella parvula DSM 2008] # 1 59 1 59 59 114 96 2e-24 MSEIKVGKNETLDSALRRFKRSCQKAGVLSEVRKREHYEKPSVRRKKKSEAARKRKFRA >gi|290780885|gb|ADGP01000023.1| GENE 126 125267 - 125806 294 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 32 176 1 146 147 117 46 2e-25 MKSRVYVERRSPKQHGNGSSEHKGSETEGDDMSLKEELLQDMKAAMKAKADGKTALSVIR MVRSAVRNKEIDEKIELDDAGVGAVIAKEMKQRKESLAEFEKAGRNDLISQVQAEISVLE KYMPKQLSIEEVRQLVQTVTAGKPDLKMGDVMKAVMPQVGGKADGRVVSQVVKEVLQNK >gi|290780885|gb|ADGP01000023.1| GENE 127 125955 - 127856 2215 633 aa, chain + ## HITS:1 COG:PAB1292 KEGG:ns NR:ns ## COG: PAB1292 COG0174 # Protein_GI_number: 14521807 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Pyrococcus abyssi # 31 525 15 430 439 111 26.0 4e-24 MTKDGLVYVIPAGKYGKEGVLALLRQHPEIKFVSLVGIDLAGNDTDEKIPVSLFFEDYDK FFNAAACQTDGSSVVLPGIATLANARVDMKADPGVNWFVDYNDENMDAVTGKPVGTLRIP AFLQHATGYIDSRSVLRNTTNYVGNKIKELIRQYGIQGLAVTAEDIDKIVFTTATELEFW VKTPSQEVATRLLSASQKLQEQYWQRTHGVVRTALEQTIERLAQYGLEPEMGHKEVGGIK AHIDDSGKLIFVLEQLEVDWKYASDPVQTADNEIQARIIIREVFRENGLEVTFQAKPIHG VAGSGEHTHVGIGAVLKNGKFINLFNPHDMHTEFLSPLGYGALMGILKHYEVINPFVSST TDSLNRLKPGFEAPVCIVTALGGERPDVPTRNRSVLAGLIRSVEAPLATRIEMRAPNPFT NTYIAIALFYLAALNGITYALKEGKTSAELLAELSKKPGEKAAYLETDRAYRSEVDVFEH FGEEERSAMFGKAPRTVWENFQALNRYPEKLAALVCPAFEKRIMDSFALGALNRWALELQ YRSVPENLAKVIAAKQLHGEGDGNPLEEARWRTINALRTELGRDTDRGLSIFSRIKNALA AKDYDTASDLMVVMNDKMDELDELYYEYSHNAF >gi|290780885|gb|ADGP01000023.1| GENE 128 127969 - 128127 56 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969057|ref|ZP_06560592.1| ## NR: gi|290969057|ref|ZP_06560592.1| hypothetical protein HMPREF0889_1284 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_1284 [Megasphaera genomosp. type_1 str. 28L] # 16 52 1 37 37 78 100.0 2e-13 MLTVSLFVLYNKSVVMGLTEADFRGAHDTYRRPSGDCPTGAEFFLAGKEERV >gi|290780885|gb|ADGP01000023.1| GENE 129 128124 - 129800 1686 558 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 3 558 1 556 556 708 61.0 0 MTVRSDIEIAQQAQLTPITEVAAKVGLTADDLELYGKYKAKISFAAIRRLQKKADGKLVL VTAITPTPAGEGKTLTSIGLAQAMNKLGTSAVVALREPSMGPVFGMKGGAAGGGYAQVLP MEDINLHFTGDMHAITAAHNLLAAALDNHVHQGNALRIDVRRILWKRVVDMNDRALRNIV VAMGGKVCGFPREDHFMITVASEIMAILCLATDLMDLKKRMAAISVAYDLDGKLVTAGQL GVAGAMAILLKDAIKPNLVQTSEHTPALIHGGPFANIAHGCNSIIATKLALKMGDVAITE AGFGADLGAEKFMDIVCPYGNLQPHAAVLVATVRALKLHGHADPHDLASENTEALQAGLD NLAKHLDNLQQFGVPAVVGINRFTSDTEREIQLLRTWCAERDIPVAINTCWRDGGDGGKE LAQAVLRVLKQETRPVHPLYEAQTGIAEKVKTVVQRIYGGEDVVFTNKAKKQLQEIEDFG WGHLPICMAKTQYSLSDDPQRLGAPTGFTVTIDDVSLCTGAGFIVCRTGNVMVMPGLPKV PAATRMDIDENGKITGLF >gi|290780885|gb|ADGP01000023.1| GENE 130 129800 - 130423 608 207 aa, chain + ## HITS:1 COG:Ta1477 KEGG:ns NR:ns ## COG: Ta1477 COG3404 # Protein_GI_number: 16082442 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Thermoplasma acidophilum # 10 180 15 189 217 114 37.0 1e-25 MNTDAAWRQQSLDAFLQATASSAPAPGGGGVAALTAASAAALLEMVANLTLHKAGYEDAQ AVMADILTRARQLRQECLAGIAADGAAFQQVIQAVRLPKDTPRREMLVQQAFQEAARVPF RLGKKMFTLSELAVQAVKWGNKWAITDAAIAALQARAAMRASFYSVRINLQSVHDEAFVA QLVREMRTIEEQAAAREEQMERTYRDR >gi|290780885|gb|ADGP01000023.1| GENE 131 130790 - 131035 323 81 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0421_21314 NR:ns ## KEGG: HMPREF0421_21314 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 3 63 1 61 72 62 44.0 4e-09 MHMILPEEIKRLRTRCFLTQEDFAKTLGVAFSTVNRWEQGKSKPNLVAMKHVKAFCEEND IPYADIEDAWLDYKVGGKNNG >gi|290780885|gb|ADGP01000023.1| GENE 132 131028 - 132611 1097 527 aa, chain + ## HITS:1 COG:XF2728 KEGG:ns NR:ns ## COG: XF2728 COG0286 # Protein_GI_number: 15839317 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 2 524 1 522 525 682 62.0 0 MVNTKKEQERDELHRAIWAIADELRGAVDGWDFKNYILGTMFYRYISENLTNYINHGEIE AGKPNWDFAKISDEEAEEARAGLVEEKGFFILPSELFANIRKKSNEDMEWAKAHLNETLE AVFRHIEESSQGSEAESDFAGLFADFDVNSNKLGATVAKRNEKLVKLLNGVADMNLGSVQ DHDIDAFGDAYEYLMTMYASNAGKSGGEFFTPADVSELLTRLGTVRKTEVNKVYDPACGS GSLLLKSLKVLGKEGVRNGFYGQEINITTYNLCRINMFLHDVEFDKFDVACEDTLVSPQH WDDEPFELIVSNPPYSIKWAGSEDATLINDPRFAPAGVLAPKSKADLAFIMHSLSWLASN GTAAIVCFPGIMYRGGAEKKIRQYLVDNNFIDCIIQLPSNLFFGTSIATCIMVMKKNKTD NRTLFIDASNECVKVTNNNKLTPENIDRIVAIFTKREEVAHIAHLASYEEVKENDFNLSV STYVEAADTREKIDIVKLNAEIKEIVAREQVLREEIDKIIAEIEVGV >gi|290780885|gb|ADGP01000023.1| GENE 133 132608 - 133600 662 330 aa, chain + ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 6 310 13 321 345 209 37.0 6e-54 MSNEFQFLMYKSAEEDVSVNAFIQNESIWITANQMAILFDKSESTIRKHINNVFDEGELN RENNTQKVRVDGIKQPVAFYNLDTIISVGYRVNSRKATKFRIWATSILKEYMIKGFAMDD ERLKQGKTAFGKDYFKELLERVRSIRASERRIWQQITDIFAECSIDYDKNSQITHDFYAM VQNKFHYAIVGRTVAEIVYTKADKTKKNMGLTTWKNAPDGRILKSDVVIAKNYLEEKQIR QLERAVTGYFDYIEDLIERENTFTMEKFVASVNEFLSFRRYDILRDKGKISGKMAKEKAI TEYMEFNKTQNITSDFDKAVNQMLKAGEEE >gi|290780885|gb|ADGP01000023.1| GENE 134 133597 - 135474 379 625 aa, chain + ## HITS:1 COG:jhp0726 KEGG:ns NR:ns ## COG: jhp0726 COG0732 # Protein_GI_number: 15611793 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori J99 # 291 623 116 446 454 229 37.0 1e-59 MSRLDELIQELCPDGVEYDLLKNISEMQRGTSLTKKNATSGNIPVVSGGREPAFYCDTNN RDGETITVAGSGAGAGYVQYWIEPIFVSDAFSVKSNEKTTTKYLYYCLEGKQDFIYSTQK GGGVPHVHISSIENMKLPVPPLEVQREIVRILDSFMELTAELIAKLTAELTARKKQYEFY RDELLNNNQNVNVRVGKLIDMLSQPITDGPHTTPVLVDDGIPFLSAEAVSDGKIHFDKKR GNITKEFDEECCKKYKPQRNDVFMVKSGSTTGKVGYVDTDERFNIWSPIAALRVNDNNSS RYLFHLLQSTSVQNMIKSKASHGSQPNLGMRVLEQFEVPMPPLDVQIKIAEVLDNFDAIC SDLNIGLPAEIEARQKQYEYYRDALLTYAATGKIIPRQTDRQTDRQTDRQTDRHNALIKL CQYVFGVVLVKLSDIAMITRGGNFQKKDFTDTGVPCIHYGQMYTHFGIYATEPLKYISED VAKKSKMAVKNDIVMAVTSENVEDVCKCTAWLGNENIAVSGHTAIIHHNQNAKYLSYYFH SAMFFAQKKRLAHGTKVIEVTPNTLNDIVIPLPSLAEQERIVGILDRFDALCHDISTGLP AEIEARQKQYEYYRDTLLNFKKLEK >gi|290780885|gb|ADGP01000023.1| GENE 135 135494 - 138793 2023 1099 aa, chain + ## HITS:1 COG:XF2725 KEGG:ns NR:ns ## COG: XF2725 COG0610 # Protein_GI_number: 15839314 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 10 1064 16 1006 1007 1085 55.0 0 MPFFNIVAETNENTVVTAYEPVKVRADQYQSEAALEKEFIRMLCDQGYEYLSIHSEKDLI QNLRTKLEELNHYQFTDHEWHQFFHSAVANPNEHIVEKTRKIQEDNVQVLRRDDGSSKNI TLIDKQNIHNNRLQVINQYKVNAGKAGREGAPGHVVGKEDGACLPDRQASYDNRYDVTVL VNGLPLVHIELKRRGVAIREAFNQIHRYERDSFWAGCGLYEYVQIFVISNGTHTKYYSNS TSFNAIKDAKAAKGKKGKTSNSFEFTSFWADANNRVIQDLIDFTKTFFAKHAILNILTKY CIFTSENMLMVMRPYQITATERIINRIEIANTYKKYGSIEGGGYIWHTTGSGKTLTSFKT ARQASYLPFIDKVLFVVDRKDLDYQTMKEYDRFEKGAANSNTSTAVLKKQLENPNARIII TTIQKLATFIKKNPGHEVYQKHVVIIFDECHRSQFGDMHTAIVKNFKKYHLFGFTGTPIF SVNAGRAKNPAFFTTAQTFGDRLHTYTIVDAINDKNVLPFRVDYIKTMEAEEDIDDEPVR DINREQAMMAPERISLVTKYILDHFDRKTYRGDKTYVYNTLMNVGEVASADRGAVEEIKK KQRVSGFNSIFAVASVPMAKLYYEEFKRQMAADPTKKLRIATIFSYGANEEESDLPDGEA GGILDEENSEDTSALDTPSRDFLENAIKDYNDLFHTNYDTSGDKFQNYYKDVSLRMKNKE LDLLIVVNMFLTGFDATTLNTLWVDKNLMMHGLIQAFSRTNRILNSIKAFGNIVCFRNLQ KRVDRAISLFGDKNAGGIVLLKRFKDYYYGYESVDGKPMPGYADMMEELEEKFPLSEPQI VGEQHQKDFITLFGAILRMRNLLSSFDEFAGKERITERDLQDYLGRYQDLRDEWKRKREQ GESTDITDDIVFEVELIKQIEINIDYILMLVKTYHDTHGEDKEVLITINKAIDAGPELRS KKELIKTFIAGINEVDDIMAAWNDYVAGKREEDLENLIKEEKLKPEETRKFLENAFRDGA IKTSGTDIDKLMPPVSRFAGGKRAEKKQGVIGKLKSFFEKYFGIGGAASFTEEPPSLTDT LSSEPAVMVAEEEASYHTK >gi|290780885|gb|ADGP01000023.1| GENE 136 138965 - 140071 1321 368 aa, chain - ## HITS:1 COG:BH4051 KEGG:ns NR:ns ## COG: BH4051 COG0012 # Protein_GI_number: 15616613 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Bacillus halodurans # 5 368 3 366 366 469 65.0 1e-132 MSTNLEVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVEVPDTRLRTLTDMY HPKKTIPAVMRFVDIAGLVAGASKGEGLGNKFLSHIRETDAIAEVVRCFEDDNITHVSGS VDPLRDIDIINTELCLADLETVQRRVDRLAKIAQCGDKAAKAELAVLQKILTALEAGEPV RKVALQDEEKQTVKELNLLTIKPILYIANVAEDEAAQPDANPLVQKLTAFAAAEGAQVVA VSAKIEAEIAELPDDEAAAFLEELGLSESGLTKLIKAGYSLLGLINFFTAGADEVRAWTI VKGTKAQKAAGKIHTDIERGFIRAEIVSYTDLIACGGEQAAKEKGLVRLEGKEYLMQDGD VTYFRFNV >gi|290780885|gb|ADGP01000023.1| GENE 137 140085 - 141326 1281 413 aa, chain - ## HITS:1 COG:MTH52 KEGG:ns NR:ns ## COG: MTH52 COG0436 # Protein_GI_number: 15678081 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanothermobacter thermautotrophicus # 1 411 1 410 410 481 55.0 1e-135 MAHVNENYLKLPGNYLFADIAKKVARFSEAHAEAEIIRLGIGDVTRPLAPAIVAAMHKAV DEMGQAATFRGYGPEQGYEFLRRAIIKGDYESRNVSLQADEVFVSDGAKTDVACIQEIFG NDLTFAVADPVYPVYLDSNVMAGHTGDYDAAKKQYDRVVYLPCTAENGFKARPPKEKTDI VYLCNPSNPTGTAMSRRELTDWVQAAKENKFIIIYDSAYETYITEADVPHSIFEIPGAEE VAIELRSYSKCAGFTGTRCAYVVVPHACKAYTADGRAVALNPLWYRRQCTFFNGTPYVVQ RAAEAYYSPEGRAQCLADVAYYMENAHIIRDGLQNAGFTVYGATNSPYAWVQTPNGMKSW DFFDLLLTKAHVVTTPGEGFGPHGEGYLRLTAFGTRENTIRAIARIADLKLFR >gi|290780885|gb|ADGP01000023.1| GENE 138 141473 - 142690 421 405 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 5 405 7 413 413 166 27 5e-40 MWFSESIHMALTSLLANRLRSLLTMLGMIIGVAAVIIMVAIGMGVKKNITDSISGMGSNM VMLLPGSADSDDVQGAAGSDRNLTLDDAAAIAKEIPHIAHLSPVVNQTVPLVAGNKNWTT TLYGVTPDYLYIRNLATRSGLFLTADDLHSRRRVAVLGLTVAKKLFQSQNPVGQTVRISG QPYRIIGVLDSKGASVWGDDQDDVILIPLTTAQERLLGITYLQGIMMQVDTPPYIDGVQG AVINIMRQRHHIQPGQDDDFTVQTLQSIQQTLHKTGAMLTLFLGSIAAISLLVGGIGIMN IMLVSVTERTREIGIRKALGATYAAIMLQFLIESVVISVLGGLAGIAVGCLSARLLSGIG NIETQITLFPILLSFAFSVGTGIFFGLYPARKAALKDPIDALRYE >gi|290780885|gb|ADGP01000023.1| GENE 139 142680 - 143387 314 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 25 222 17 217 245 125 36 1e-27 MSEPIIILHHISKTYTMGGQQFTALRDIDLTIRAGEFVALMGPSGSGKSTLMNILGCLDR PHTGSYLLGGREVSRLTDDELAHTRNRDIGFVFQNFNLLPRLSALENVALPLVYAGVPRR ERTYRAERMLADVGLTSWRKHTPTELSGGQRQRVAIARALVHNPPLIMADEPTGNLDTRS TQDIMNLLKDLQAQKKTVILVTHEPEIAAAAERQLLLRDGTITRDEGKGVVMDVV >gi|290780885|gb|ADGP01000023.1| GENE 140 143397 - 144497 1261 366 aa, chain - ## HITS:1 COG:NMB0548 KEGG:ns NR:ns ## COG: NMB0548 COG0845 # Protein_GI_number: 15676454 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis MC58 # 33 362 28 380 392 102 27.0 1e-21 MNNLHRKKISIIILCILVAVLGTVAVYLRQHRQPAAAVPTETFTVTAMNITSQVTATGTV SPVEAVEVVPKITARVKQVCVKENDTVKAGQVIAILDDADYRAKLVQAQIKVGNTRAVYE RAATLYRAGAGSQAAMEDARADYEAAVSALSEARAEMNETVIRASMNGVVVGAPKSVGTM ASQGNGGGTVLMRLADTGQKQIVAKVDETDIGKIKAGQTASFTVDAYGGKKFTARVVKIS QTDTNNSWDPDNTGDRTGNAPSVIYYEVTLAVQDPENLLRLGMTARVAITTATADHVPVL PLAALKTDARGTTVTKMQADGTQKQVPVTTGIYSDKYVEIRNGLHLGDRVAMAYATASKP EEDSLF >gi|290780885|gb|ADGP01000023.1| GENE 141 144624 - 145892 1586 422 aa, chain + ## HITS:1 COG:NMA0365 KEGG:ns NR:ns ## COG: NMA0365 COG1457 # Protein_GI_number: 15793373 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Neisseria meningitidis Z2491 # 41 419 14 398 437 263 45.0 5e-70 MLYYSISVYFVCGTMQVRRRQREKEGGSVETQETKSSAFSLGLLWFGAGVSIAEILTGML VAPLGFAKGLAAILLGHIIGGMVMYGAGLIGARRRESAMETVRISFGRGGGRFFSVLNVI QLIGWTAVMIVSAAHAANLIRPWGMTTWSVIVGLLIIIWIALGIKNLNKVNVAVITLLFL LTVVLSVTVGRGHGGFPVGPPITFGGAVEMAVAMPLSWLPVIADYTRRAEHPVRGTLVAC TAYFIAGMWMFLIGMGAVIFTGENDIAAVMVKAGLGLCGILIVLLSTVTTTFLDAFSAGV SARSLWDTAPENATKGMAIIATVLGVVIAVTASQQTYQDFLYFIGSVFAPMTAILLADYF ILHRDRSRERLNLLNLVLWGIGFIVYRCLMTVDTPLGITFPVIVLIMIGSTIVHGIEKKI RS >gi|290780885|gb|ADGP01000023.1| GENE 142 145950 - 148052 2323 700 aa, chain - ## HITS:1 COG:sll1434 KEGG:ns NR:ns ## COG: sll1434 COG0744 # Protein_GI_number: 16330902 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Synechocystis # 31 608 49 625 650 411 41.0 1e-114 MYTPRRRAKHAKRSGAVHRLRLLMILFLVVIAGLGFGYIFAAYQTLPPVTHNMRPISSSQ VFDIHGRLITTLYSEENRLPIDINQVPPNLQNAFISAEDNRFYSHIGIDPVGIARAFVAN VLHRGISQGGSTITQQLAKNAFLSQKQTLKRKIQEAMLALELERKYSKKEILEMYMNEIY FGQGSYGIQTAANTYFGKSVSDLSLKQCALLAGLPKSPNYYSPFNNPKEANERANVVLDQ MQKYGYISAADCAAAQAADLQLAPKKRSSQDDEPTAFIDYVTRQVAEKYGDAALYKQGLK IYTTLDLDKQKAAQRALRNLPTNYTDKNGLLQPQVALVSLDPHTGYIVAMIGGRNHDSFN RATMAVRQPGSAFKPFVYAAALQKGMTPDTTFDDKEISYGSWTPRNDDRTYSGTMTIREA LIRSVNTIAVQTANQVGPRRILALAEEMGITTLKDSDNNLAMALGGLTQGVTPLEMAGAY GTFANEGVHVAPVAILKILDQNNNVLEDNTQTPPEKKQVLSAKEAYEMTYMLEGVIQSGT GAAANIGIPAAGKTGTTDNNVDAWFVGYTPDLVTAVWIGDDSGSRSLGAVYGGTIPARIW HDYMAAAVDRGSAAFRTPPGVKKAAPPADTTANTDDQDADTSPTPTDDEAAQDNTAEAVL PKQQDKAKTVSARTGGRHKNTEQPSRPPRTARKTAAQVSP >gi|290780885|gb|ADGP01000023.1| GENE 143 148342 - 150711 2674 789 aa, chain + ## HITS:1 COG:SSO0883 KEGG:ns NR:ns ## COG: SSO0883 COG0574 # Protein_GI_number: 15897773 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Sulfolobus solfataricus # 1 779 10 795 799 708 48.0 0 MDREQAFVLWFDEVHRQDVALVGGKSSSLGELTSSTAVPVPYGFATTAYGYRYFMKKTGL DGQIKQMLQDLTDVEDPVQLQRVTAAIRKAVCEATMPEELAAAIRDAYLALGKKAGIADP FVAVRSSATAEDLPDASFAGQQDTYLNVQGADTVIQKVKECYASTFTDRATYYRQKKGFD HLEVALSAAVQMMVFSKAAGVMFTVDLVTGDDSTITIEGAWGLGEYVVQGTVTPDNFKVN KENLTILSKMANTKPVQLVRLPGGDCEERPVPEAAQKALVLTDAQVKELANYAKMIEAHY GCYMDMEWGIDERTNKIWILQARPETVWSKKNKEKAAPATTERCVLVKGLPASPGQAYGK AHVISDPAQIAEFKDGEVLVTTMTAPDWVPAMKKAKAIVTDAGGMTCHASIVSRELGIPC IVGTKSRSREATAVIQNGQDITIDATNGIVYQGRVADLVTPAAAAATATPATAEPVPITG TKVYMNLGNPDLAAKYGMLPCDGIGLMREEFIWTTFIHEHPLYLLETGHPERVTDQLAEG IRKVCQALAPRPVTLRFSDFKSSEYRNLTGGDAYEPQENSALLGWRGASRYYHPQYKEAF KLEVQAVRKVREEYGFKNLNVMIPFCRCVSEMEHITALMAAEGLRRVPDFKVWLMAEIPA NIILADQFNAFVDGYSIGSNDLTMLVLGCDRDNETVASLFDERNLAVKRAIRHLITVAHK DGKTVSICGQAPSVYPEFTEFLVKSGIDSVSVNPDAVAATKKRIAQIEQRLLLDSLTGRG RADTEEYTW >gi|290780885|gb|ADGP01000023.1| GENE 144 150804 - 151448 662 214 aa, chain + ## HITS:1 COG:SA1393 KEGG:ns NR:ns ## COG: SA1393 COG0517 # Protein_GI_number: 15927144 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Staphylococcus aureus N315 # 2 205 3 201 207 172 42.0 5e-43 MLSARQETILEIIQHNSPITGQHIASRLHVTRAALRSDLAILTMLGLVDARPKVGYFFTG RQAREFPLNAMAEMTVASCLSQPVVVGTDTSAYDAVIALFTEDAGTVFVGDNNILAGVVS RKDLLKTAMGGNDLRTLPVRMVMTPVSKIIYITAAEKVLAAAQRLLAYEIDCLPVVQRIH DEADTDKKELKIIGRISKTNITRIFAECVSGRRI >gi|290780885|gb|ADGP01000023.1| GENE 145 151450 - 152271 918 273 aa, chain + ## HITS:1 COG:BH1373 KEGG:ns NR:ns ## COG: BH1373 COG1806 # Protein_GI_number: 15613936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 3 266 7 270 270 291 53.0 1e-78 MNKPIIYACSDSLGDTAERVARAAASQYDKAVFDIVRMPYIRTDRQIEELVAKAGATDAM ICYTIISPSLRRKLRELTEKYKITAIDIIGPMLAGIGTLTDTEPTVRPGMIHQLDEEYFK RVEAIEFAVKYDDGKNPMGFFKADIVIVGVSRTSKTPLSMYLAHKRIKAANLPLVPEVAL PPELFNIPVRKIVGLIIDPFKLNFIRSERLRSMGLDSNAGYANIDRINEELTYARSVMRR LHCPIIDVSSKAIEETANLVMEIVKRNKELYTE >gi|290780885|gb|ADGP01000023.1| GENE 146 152598 - 154505 2010 635 aa, chain + ## HITS:1 COG:CAC2362 KEGG:ns NR:ns ## COG: CAC2362 COG0441 # Protein_GI_number: 15895629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 626 1 626 637 855 63.0 0 MAEVQLKDGSKKTFADGITLREAVKQLSNSLAKKVLAARVNGKVTDLCEPVADGTTVEFL TFDAQEGKDTLRHTASHVMAQAISHLYPDVKFAIGPAIENGFYYDLDTEHRFTQEDFAAI EKEMAALVKANEPIEKMVVSRAEALQFFRDKHQDYKVELIEDLPADAVISLYKQGDFVDL CAGPHCESTGRVKAFKLLTVAGAYWRGDEKNKMLQRIYGTAFEKKADLDAYVTMRAEAEK RDHRKLGKQLDLFSFHEEGPGFPFFHAKGMVLRNSLLKFWRELHAEADYDEIMTPTILNR QLWEQSGHWDHYRDNMYFTTIDEQPYAIKPMNCPGGILVYKSSVHSYRDFPIRAAELGLV HRHELHGALHGLFRVRCFTQDDAHIFMLPSQMKDEISGVMDLFDKAYKQFGLEYHVELST RPEDSMGSDEIWESATKTLHEVIEEKQVPYVINEGDGAFYGPKLDFHLKDCLGRTWQCGT IQLDMLMPERFDVTYIGEDGQKHRPVMVHRACFGSIERFLGIITENYAGAFPVWLAPVQI KFLPISDKQLAYAEDTARRFKKAGLRVEVDTSSEKIGYKIRKAQMEKVPYMAIVGDKEMA AGTISVRERTQGDIGVKAAEEVLHMIKQLADSRQG >gi|290780885|gb|ADGP01000023.1| GENE 147 155059 - 155656 663 199 aa, chain + ## HITS:1 COG:no KEGG:LM5578_2512 NR:ns ## KEGG: LM5578_2512 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_08-5578 # Pathway: not_defined # 1 157 1 160 327 82 30.0 8e-15 MQHLQWVKVPVGYMDDPRMVYLTAQKNGTFLFTFWFYLRDLAAKINDGGRIGVTPRLPIA ISTFAARFHKKPAVIEQALHVLLQLELLQRTADGLLYVTMWEDMQGGGSRREATRARVAR WRQRQREARNAAACPEEAEGTAAETTVTAVAHAVPDVMSAAETTATAVAAAVPNVMPVAA ETTVTDVAPAGSDVMPAAA Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:02 2011 Seq name: gi|290780883|gb|ADGP01000024.1| Megasphaera genomosp. type_1 str. 28L contig00058, whole genome shotgun sequence Length of sequence - 6054 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 6053 6672 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|290780883|gb|ADGP01000024.1| GENE 1 2 - 6053 6672 2017 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 68 875 280 1049 2712 201 30.0 2e-50 TQDIDAITKKGGTIDTAITALKNGEVKSNTTAINNLSVTVAENKRATDGSLKKLEEAFNK RISGQNAGQVHLGIDTKENGQLGMRYFRTSMSKDGDAHPDGTDSLAIGNSTTKGSGAIGI AAGGENFAAIEGKDSIGIGNKVKITADTKNENVIAVGTEASVLDQAAGAIAIGYQTSIAA TNENAMAIGTGAKTYAEDTMALGHSAQSNMKGSIAIGAGAQVGEYLEPPVLNTDGGKQDG LGSGINGIAIGNGAQSMSDATIAIGVNAGAGMKKTGNIPLAASHIIIGDQAGEGLEGLQN IALGYKSGGNVQSNYNVSIGSEAGRNILGSRTDPIGKNVSIGYHANFRKAVTQPEQDVED TEGDPGTTTPPKEKMMKIPRIAEDSEKIRLVQSTAIGSESIAANDGTAIGYQAQALGHSG TAIGFTAIAKGENTLALGADAKAEAGNVAIGSGSVAPEQSVTGKTAEYTGAKASTTVVSV GNQTGHMLRRVTNVGDAIDAQDAVTLAQLKAGLAQVAKDINVKAQGPHAASGVGYDLGAI GGMPSITLQPGDQKTGTIIHNVAKGVNAGDAVNLAQLKEYTEQGMGHYFSTNAPVAKSNF DNGGATGENAVAFGIAAASTAKYSAAMGNYVQAQGEGSLAIGTGYYDKDDPATKPATGEE VQPIVTKAVSGYRYNAAIGAGAITEGNYSMAVGPRAMVRHKLDKQSGESLSPDYSVAMGY LSTVYDRNGIAIGNSAEAHQQDGIAVGRDSWSLRDDAVVMGTHNTAVGKQSAAVGYQNGV SGMNTYVIGSSNMNLTDEDRKDVLDTLAYAATKGITDDNSTVLGNNNTFDPFFEVKKSLD QKTDVNIIKRGEDNHLVGNQNAINMYNTHAFVVGSSNTLTKTNNTGVLGSGNTVTVDNTI TLGNTNKAGGADTKILGHENTITAESAAIIGDQNKTISGDKIHILGSSNENISSTKGHII GFANTEIAGTRHRIIGDENRQVSGQHTVLLGDANVNIDAANTQIFGDENTGVSTVRSHII GSLNSSISGTGQQIIGDENKNIAGNRNVILGNKNNTVGTDTEGTQIFGDENTEVSATKSH IIGSLNSSIAGTEQRIIGDENKNIAGNRNVVLGNKNKNIAANTENTQVSGNENADIAAVR SLVWGYQNQQVATGTADTQIIGNRNSNIKAERTQIIGDSNAAGSVETNMTTGASGEPIAQ STLTAITDSQIMGNANKVQHSHVQVLGNRISTGLGNSAYIGDDAAYTDDAALSAGNTEYT KDAIYGYTFAAAKPTGVVTVGAKDKERRIQNVAAGLVAPTATDAVNGSQLYQLTRPLHFG GDNSVFAEHEDHAKDKNVLHTGSNQILTIKGGADLSKVSAGNIGVVVDAEQKTMNVKLAK NLTDLESVTFGNDDTAMKLDGTTRSISQVKKVTFGAPDAKNSVVIDGTKNVLTGLSNTEW LPPAKRGADFDKSQAATQGQLEAFEKTTQRGFDVYVNTEDKADTFSVTLGDEKKNDAIGF LAGNNLTVTHKDKQITYALKDDLSVGRKTENGEPGKDGSIGVQGKNGESVVINGKDGTVT MESAKDEHNNKNTISLNGKDGTVGITGKDGTGVVMNGENGTIAVQGKDGEDGKAGAAVVI DGKNGITTIAGKTDENNKKNMITLNGKDGSMGVSGKDGNHVTLNGNDGSIAIKGNDGTDT VFVTTQNGTVGVDGQDGTTRLVVKDGDKTNALATVKDGLKFMGDAGTENKLSLNEQLTIT GGIAASEALSTENNLGVVADGKHNLTVRLAKDLKGLDSISLGDKEAPMKIDGTKKTISRI QTMIFGAPDSTDRLTLHGDDKVITGLSNTELKKDMKADQAASQGQLTQVLEKLDQAKKDA TDYQLVGNPEDTTNHKYTVSDAGEVTLTVQDKKHPTNTEKVTIADVAKKSDVTKLAGTFD DYAVKYDKNGDVVNKDSITLAGNTTTGTAIHNVADGKVEQNSKDAVNGGQLFTTKQTIEN KMGKTNQGFDVYITDPTKEENTFNVKLGAEKKDAFGF Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:05 2011 Seq name: gi|290780877|gb|ADGP01000025.1| Megasphaera genomosp. type_1 str. 28L contig00008, whole genome shotgun sequence Length of sequence - 6193 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 72 - 155 76.0 # Leu TAG 0 0 + Prom 308 - 367 2.8 1 1 Tu 1 . + CDS 393 - 1346 1123 ## COG0039 Malate/lactate dehydrogenases + Term 1362 - 1433 11.6 - Term 1368 - 1406 9.5 2 2 Tu 1 . - CDS 1425 - 2870 1619 ## COG0833 Amino acid transporters - Prom 2908 - 2967 7.2 + Prom 2937 - 2996 11.5 3 3 Op 1 . + CDS 3068 - 3352 437 ## COG1605 Chorismate mutase 4 3 Op 2 . + CDS 3337 - 5502 1805 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 5 3 Op 3 . + CDS 5526 - 6155 660 ## COG1040 Predicted amidophosphoribosyltransferases Predicted protein(s) >gi|290780877|gb|ADGP01000025.1| GENE 1 393 - 1346 1123 317 aa, chain + ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 3 316 2 318 318 246 38.0 3e-65 MKLKRRIVGVVGVGHVGAHVAFNLGMMGIADEVRICDKNEQKVRSEAQDLNDAAPFMPNH TRYKEVDYAGLKDCDIIVNAVGNIALLETHDRDKELENSVKEVSSFIPKIMAAGFDGIFV NITNPCDVITNLIREKSGLPSHRVVGTGTLLDSARLIHVIAAHTGLDARGFTAFMIGEHG NSQMAAWSCISFYGKPLAELAHTPQFSFTKDESQAKAIKGAWVTYVGKGCTEYGVASAGA TLVRTILRDEKRILPVSAYLQGEYGERGIYCGIPAIISADGVEAVMEYHLTPEEQLEFKQ CCQAIRNNIAKSYDVLI >gi|290780877|gb|ADGP01000025.1| GENE 2 1425 - 2870 1619 481 aa, chain - ## HITS:1 COG:YPO1309 KEGG:ns NR:ns ## COG: YPO1309 COG0833 # Protein_GI_number: 16121591 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 5 478 15 489 503 577 60.0 1e-164 MEEKQGLRRSLKARHMNMIAIGGAIGTGLFVAGGETVSSAGPGGALVSYALIGIMVYFLM TSLGEMAAYLPVSGSFETYANRYVDKSLGFALGWNYWFNWAITLAAELVAGSLIMKYWFP TVPAAVWSGMFLIILFLLNYLSTRSYGESEFIFSGIKVVTVLVFLFAGACLILGIGPSSS PGFTNWTIGDAPFVGGFTSMLGIFMVAGFSFQGTEMIGIAAGESEDPEKNIPRAVHSIFW RILLFYFGSFIVIGFLIPYTDPNLLNTDIANISISPFTLVFERFGFTAAASLMNAVILTA VLSAGNSGLYVSTRMLYSMAETGQAPKCFLKLNKRGVPVPALLATAAFGLAAFLTSLIGE GKAYDWLVNISGMAGFITWIGIAICHYRFRRAYVAQGRDLKDLPYRATLFPFGPILALIM CIIITAGQNYSAFLGPHIDWYGASVAYIGIPVFLAVFLYHKAKHKTHIVPLQKVDLSRHQ K >gi|290780877|gb|ADGP01000025.1| GENE 3 3068 - 3352 437 94 aa, chain + ## HITS:1 COG:SPy0722 KEGG:ns NR:ns ## COG: SPy0722 COG1605 # Protein_GI_number: 15674778 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Streptococcus pyogenes M1 GAS # 1 87 1 87 94 60 34.0 1e-09 MDLTECRRQIDEIDRELTQLLEQRLHLVAQVACYKKAQHMEIFDPRREAAVLKRIAALAN NGELAPYLQNIYRCIMAESKNYEAEKMEDIWVTK >gi|290780877|gb|ADGP01000025.1| GENE 4 3337 - 5502 1805 721 aa, chain + ## HITS:1 COG:all7071 KEGG:ns NR:ns ## COG: all7071 COG0507 # Protein_GI_number: 17233087 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Nostoc sp. PCC 7120 # 6 714 18 743 748 430 35.0 1e-120 MGDEISLKGIVERLIFIAPDSDFLVFTIRTDSEKKIVTVAGHMEKPLVGDSLCIQGTWTE HKKYGRQWAGTSWQRQQANSKENILRFLSSGEVTGIGPELAKRMVDAFDLQTMDIVQNDP DKLLQIQGIGIKKVAQIKSCIGSKKILHQVAWDMESHGISGRYAGRLIQHYGEKALTVLT TDPYRLMQDIDGIGFKMADQIALAYGGAENSEKRFYAALVYVLCNRTRKGHVCLPRSVVL KDGGDLLQVPPQVLQEPLADLLQQGLLKSDEYRNEQYIYTVHQYDEECTIAERVREMTAT RVDRDRHAIHACLKSWQETYQFTLDPKQREAVISSLQSQIQIITGGPGTGKTTVIRAIIQ VAEQEGLRILLCAPTGRAAKRLRETTGREAYTIHRLLGANGVTGGKQIFEYNEDKQLPAD MVIVDEVSMLDMELCYHLFQALPDSCRCVLVGDAEQLPAVGAGAVLHDFLHSRMVPSVRL NTIFRQKEGGRIVTNAHLIRSGRVPVCNQEEEFQFIEIDSEENGARKIADLYGQERQRVE DIFHIQVLAPMYKNSCGVDNLNRLIQAQYNPSAVNRPEYIQGDSCYRIGDKVMQKQNNYD KGVFNGDIGEIWAIHDDKIFVRYAERDVTYTKDEINEITLAYAVTVHKSQGSEYHTVILS LVNSHFIMLQRNLLYTAVTRAKQKVIIVGQKKALQQAVLNAKTNRRCTLLAARLQVEGLW G >gi|290780877|gb|ADGP01000025.1| GENE 5 5526 - 6155 660 209 aa, chain + ## HITS:1 COG:DR1389 KEGG:ns NR:ns ## COG: DR1389 COG1040 # Protein_GI_number: 15806406 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Deinococcus radiodurans # 1 209 20 219 219 87 32.0 2e-17 MLYPPRCPGCNGLLRPQQHWCHACKRKWGDGRRLQRQGNIRFLDAIYCVASYRGPVGNGL RDLKYGAHSGQDDPWRELLSSFPWTKRLQTHHGVVPVPLAWEKKEIRGFNQTEILFRSWA RHMELPWLDILQRVRPTAGQYALTSQERYDNIKNAFAIKGNCASMVKGRHIIVVDDIYTT GATLDGCARVLKKHGAAMITGLVMASDAR Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:06 2011 Seq name: gi|290780875|gb|ADGP01000026.1| Megasphaera genomosp. type_1 str. 28L contig00003, whole genome shotgun sequence Length of sequence - 565 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 563 577 ## UMN179_00317 hypothetical protein Predicted protein(s) >gi|290780875|gb|ADGP01000026.1| GENE 1 2 - 563 577 187 aa, chain + ## HITS:1 COG:no KEGG:UMN179_00317 NR:ns ## KEGG: UMN179_00317 # Name: not_defined # Def: hypothetical protein # Organism: G.anatis # Pathway: not_defined # 17 127 1005 1114 1336 89 57.0 6e-17 KVYAAIKDKADKSELTNKADTSLNNITEAGKTVIKDLAKGAVKVADGTNTTVTTEDGKDG SKTYKVNVSDADIKKAVASDLNKKADKDAGNIGDKERTAWANKLGTGKVEANDANLVTGG TVQAALNPVKTQAETNATNITGLTTRVGKNESDIKTLQGGFTLQDANKIVGKQTVTAGSM VTVTGDK Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:10 2011 Seq name: gi|290780872|gb|ADGP01000027.1| Megasphaera genomosp. type_1 str. 28L contig00011, whole genome shotgun sequence Length of sequence - 5457 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 23 - 4513 5181 ## COG5295 Autotransporter adhesin + Term 4539 - 4593 15.3 + Prom 4677 - 4736 9.7 2 2 Tu 1 . + CDS 4916 - 5456 579 ## gi|290969090|ref|ZP_06560621.1| hypothetical protein HMPREF0889_0139 Predicted protein(s) >gi|290780872|gb|ADGP01000027.1| GENE 1 23 - 4513 5181 1496 aa, chain + ## HITS:1 COG:FN1499 KEGG:ns NR:ns ## COG: FN1499 COG5295 # Protein_GI_number: 19704831 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 1356 1495 345 479 479 82 36.0 6e-15 MEHAVPGTVATVDDLKRVGFVVADGSNYHETVTNAQTVKFVGEGLAEVSGKTEDNVRTFT VKVDDKKVADAVKSINDKAGNAPTQYVDKDGNPLVKAKDGNYYPKDKVGDDGQPKPDAKS VDPAGIQVGEKGKTTQLTNVAPATKAIDKENDPTNGLADLANAKSGTVATVDDLKRVGFV VADGANYHETVTNAQTVKFVGEGLAEVSGKTEDNVRTFTVKVDDKKVADAVKSINDKAGN APTQYVDKDGNPLVKAKDGNYYPKDKVGDDGQPKPDAKSVEPAGIQVGEKGKPTQLTNVK PGTNEITAEGPTKGLADLASAKDGTVATVADLKKLGFVIKGKAEDGTTDVVAQVKHADTV EFAGEDLAKVITESANGVSKVTVKVNKEEIAKAVNAENAKKGSEPTTYVDENGDPLVKGD DGKYYKPKADGTPDTDAGEKTPAGIRLGEKDKPIQLDNVARGTESKPVNKEDGQPMMGTD TKPVQLADLKAAKDTKVATVGDLKDMGFVLGASVNAAGGDKEYQDVVKNGNKVKFVGLGG AWISGKTAADGTRIITIDVNADNLVTGTQNAIQYVDGQGNRMIPMLQKGNEVLYYNAADN PVKHKMPNSDKEAVYRMSDIVEGTGTLKPDAQPLQGKKAADVPNLGVALVHPNGSADTTE GTVLRNVGVGTATIAAPTDDKDIVGKAKAGLADLANSKDTNGLSVADAKKLGFVIKGKAA DGTTDVTGQVKHANTVEFAGEDLAKVITESANGVSKVTVKVNKEDIVKVVNDANDKKGSA PTQYVDKDGNPLVKAKDGKYYPKDKVGDDGTPQTGAQAVDPVGIQVGEKDKPTQLMNIAP GTTSIATPTDPNASQADKAKAGLADLSIPTDAASDNVSKHTAATVDDLRRMGWILSVGDT YADKVQNAQEVNFKGAGLAEVSGQTEGQKRVITVTVDEQKVAAAVKAINDKAGNAPIHYV DQEGNPLVKAKDNKYYPTDKVDNEGNVIAGAKDAVPVVQIGEKGHPMQLTNVAAGTSEIK EGPTKGLADLEHAASGTVATVDDLQKLGFVIKGTDENGKAVSGQVRHANTVEFAGDGLAK VITESKDGVSKVTVKVNKEEIAKAVNAENAKNGSTPTKYVDKDGNSLVKGENGKYYKAKD DGTPDTEAGEKMPAGVQIGEKDKPITVTNVKSNFDAVAPNAKEAKAPESKKNPDGSVDPT AANPLVAMQHNAATIADIMNSPWNLQVNGKAVKAVKAFDTVNITDGTNTKVVATETGYKV NVVGLPTAYTDNAGNTIAKGTDGKWFVTDKDGNMTATPADLGQDGKGTPSVSLVNPAAEP GKAGEPVVMHNVGQGNLPTDAVNKDQMDTAIAGMAKAIGNTKDEAHGIGADAAALAALKP LQYDPVEPTQIMAGIGNYQQKTAVALGVAHYTNESTMLNAGVSLGTGHTMVNVGYTRKFG HTKDEKEIPDRYKAGPISSIYVMQDEVSALKAENEQQKREIQELREMVLAMAANKK >gi|290780872|gb|ADGP01000027.1| GENE 2 4916 - 5456 579 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969090|ref|ZP_06560621.1| ## NR: gi|290969090|ref|ZP_06560621.1| hypothetical protein HMPREF0889_0139 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0139 [Megasphaera genomosp. type_1 str. 28L] # 1 180 1 180 180 247 100.0 3e-64 MNKIYRVIFNKARGIYQVVSELVHSQSKSKSGKRGGIVVKTTGAAMLAVVLLTSAGGINM ASASSNASVTTPGSTPANPKIEELLQQLNALSGRVGGNEGKIDKNAKDIVAITKQGGTID TAIAALKNGEIKSNKEAIAALTGETGAITKNSRAIQTNAEAIAALTKEGGAVTANKTAIE Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:27 2011 Seq name: gi|290780851|gb|ADGP01000028.1| Megasphaera genomosp. type_1 str. 28L contig00023, whole genome shotgun sequence Length of sequence - 22210 bp Number of predicted genes - 21, with homology - 20 Number of transcription units - 10, operones - 5 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1673 1701 ## CHAB381_1401 putative large adhesin 2 2 Tu 1 . + CDS 1775 - 2452 974 ## COG5295 Autotransporter adhesin + Term 2483 - 2519 6.5 - Term 2459 - 2516 14.2 3 3 Tu 1 . - CDS 2550 - 3452 1172 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - Prom 3498 - 3557 5.8 + Prom 3457 - 3516 5.6 4 4 Tu 1 . + CDS 3610 - 5283 1853 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Prom 5339 - 5398 2.9 5 5 Op 1 . + CDS 5424 - 5696 311 ## gi|290969096|ref|ZP_06560626.1| conserved hypothetical protein 6 5 Op 2 4/0.000 + CDS 5712 - 6269 750 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 7 5 Op 3 . + CDS 6266 - 6955 750 ## COG2003 DNA repair proteins + Prom 7015 - 7074 5.1 8 6 Tu 1 . + CDS 7115 - 8161 1318 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases + Prom 8201 - 8260 5.7 9 7 Op 1 . + CDS 8286 - 8426 95 ## 10 7 Op 2 . + CDS 8476 - 9903 1600 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 11 7 Op 3 . + CDS 9900 - 10097 245 ## gi|290969101|ref|ZP_06560631.1| hypothetical protein HMPREF0889_0418 + Prom 10200 - 10259 5.1 12 8 Op 1 41/0.000 + CDS 10319 - 11065 167 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 13 8 Op 2 12/0.000 + CDS 11080 - 12507 1684 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 14 8 Op 3 24/0.000 + CDS 12525 - 13622 1274 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 15 8 Op 4 19/0.000 + CDS 13615 - 14835 1420 ## COG0520 Selenocysteine lyase 16 8 Op 5 . + CDS 14853 - 15287 647 ## COG0822 NifU homolog involved in Fe-S cluster formation + Term 15303 - 15357 11.1 + Prom 15416 - 15475 7.3 17 9 Op 1 11/0.000 + CDS 15681 - 17936 2503 ## COG1882 Pyruvate-formate lyase + Term 17947 - 17983 8.0 + Prom 17940 - 17999 3.0 18 9 Op 2 . + CDS 18022 - 18771 844 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 18776 - 18820 9.1 + Prom 18868 - 18927 5.1 19 10 Op 1 . + CDS 18973 - 20427 1507 ## COG0260 Leucyl aminopeptidase 20 10 Op 2 . + CDS 20435 - 21232 787 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 21 10 Op 3 . + CDS 21229 - 22113 878 ## Vpar_0868 hypothetical protein Predicted protein(s) >gi|290780851|gb|ADGP01000028.1| GENE 1 3 - 1673 1701 556 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1401 NR:ns ## KEGG: CHAB381_1401 # Name: not_defined # Def: putative large adhesin # Organism: C.hominis_BAA-381 # Pathway: not_defined # 28 209 352 534 1405 84 37.0 1e-14 TADKLSEALQNKINGAVDTKGDTISVADWAKKLGTGKVAKDDANLVTGGTVAQYIDPKLT HYVSISATETGEQSNYNNDGATGTRATAIGVAATAAGLDATAVGTYVNASGQSAVAIGAH AMGSSDNSTAVGTQAAALAEATAAVGYQASAMNVGSTALGTLAAAVENGSGAVGYQTIAV EGSFAGGYKSQALGAFSLALGSQAYVGTEDFKLNNIKFNKGKEYYPIFYVEDMLKDKDKK AAYQDKFKEQLQGLSDSDAETKLKYLIIADLNKNISRATAIGHRAFVSTDGGVALGSEST AKRAGGLFGYNPKNGAAFVDGTAVAEYLGKTTEYDALQTEMTAKKTAVEEAKKALKENVS DTTKKENLTKAYQALEAVQQKENLLLGAYRSAGGYGAFSVGNEEKGITRQITGVAAGTKD TDAVNVVQLKALATLPMNMYSGGKVENNTYKPGTTQWTMPLRAIRLDFGDGLKAQKIEKD GTIYTLVTLDKDSLKNDTNFKGPQGKQGPQGNKDRRESPDRRANKDRRVKKDRKANKARR ENKARKANKDRRESPD >gi|290780851|gb|ADGP01000028.1| GENE 2 1775 - 2452 974 225 aa, chain + ## HITS:1 COG:FN0735 KEGG:ns NR:ns ## COG: FN0735 COG5295 # Protein_GI_number: 19704070 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 67 214 453 613 617 66 27.0 5e-11 MPSVQTGGSKTYTVGLGSRINVGHVVINGEAENCTITGLTNKTWDPQHVVAGRAATEDQL QQATQGMEQHITAMGQRMNRVGAGAAALAALQPLDFDPQAKWDISAAYGNYVNANAVALG AFYRPNEKTLVSLGGSFGTGQNMIHAGVSLKVGRGSLPISSKAEMARQLAVQQQEVARLL SKDAQREQEMAVLKARDQERDKEMAAMKEREAQLWQEVALLTHKK >gi|290780851|gb|ADGP01000028.1| GENE 3 2550 - 3452 1172 300 aa, chain - ## HITS:1 COG:BS_yisK KEGG:ns NR:ns ## COG: BS_yisK COG0179 # Protein_GI_number: 16078139 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Bacillus subtilis # 38 299 53 300 301 265 47.0 9e-71 MRIKKLLTFEADGYRRWGVLSADEQGVYSADALEEAFFTPLTETLSEFIRQGNDSLSALA YALEQNEKTQAVSPIPLNRIRIVSPLPENERNIFCIGKNYPDHIAEFERTAKADIPAHPV IFTKAAAAVIGTEDTIQAHASLTKELDYEGELAVIIGKTGADIPLAEAMDYVYGFTILND VTARDLQRRHSQWFHGKSLDTFCPMGPYILLRDAAPDHFTIRTEVNGEIRQDASTSECIF SIPQLLHILSQGTTVHAGDVLATGTPAGVGIGFQPPKFLKAGDTVRITISSIGTLTNTVR >gi|290780851|gb|ADGP01000028.1| GENE 4 3610 - 5283 1853 557 aa, chain + ## HITS:1 COG:STM0686 KEGG:ns NR:ns ## COG: STM0686 COG0008 # Protein_GI_number: 16764056 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Salmonella typhimurium LT2 # 1 553 1 552 555 626 56.0 1e-179 MEQEETKNFIETKIEADNRQQVYGERVHTRFPPEPNGYLHIGHAKSICLNFGIAQKYGGI TNLRFDDTNPSKEDVEYVNSIKEDVRWLGFTWDDRMFYASDYFPALYAYAVKLIRAGKAY VDDLSGEEIHAYRGTFNEPGKESPYRNRSIEENVRLFAEMKAGKYGDGEKVLRAKIDMAS PNLNMRDPVLYRILHAKHHRTGTTWCIYPMYDFAHPVSDAIERITHSICTLEFEAHRPLY NWVLEEWEDPEGQKPQQIEFARLNVTHMITSKRKLRALVENGIVSGWDDPRMPTISGIRR RGYTPASIRDFCARIGVAKADSVVDIALLEYCIRQDLKYKAPRIMAVIDPIKVVITDYPE HKTEVLTADNNQENEAMGTRQITFSREVYIERQDFMEEPVKKFFRLAPGREVRLKYAYII KCEDVIKDGDGNIIEIHCTHDPESKSGSGAHADRKVKGTLHWVNAADAVDVETRVYDYLT RDAAEDEGKDFMSQINPDSLQVYHSKAERYIQQFRAGDSFQFLRQGYFVMDPDTTPDHPV VNRTVGLRDTWAKMQKK >gi|290780851|gb|ADGP01000028.1| GENE 5 5424 - 5696 311 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969096|ref|ZP_06560626.1| ## NR: gi|290969096|ref|ZP_06560626.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 90 1 90 90 140 100.0 4e-32 MKRAASMGVFWCILFLVGGGIAGGILGDALSAASVGNVMPLLTRHYEIFDIENIAVNLYV LEFHFGIRFAPNILSIAGIIAAWLLVRRVR >gi|290780851|gb|ADGP01000028.1| GENE 6 5712 - 6269 750 185 aa, chain + ## HITS:1 COG:STM3371 KEGG:ns NR:ns ## COG: STM3371 COG0424 # Protein_GI_number: 16766666 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Salmonella typhimurium LT2 # 1 178 4 182 197 157 52.0 7e-39 MLLASGSPRRRELLKFLGITFMVEPGSYKEEKPQHGDAAAFCLRQALGKTQSVAVKHPDM WVLGADTVVALDGDILGKPQDAAQAEAMLRRLSGRTHRVFTAIVLQRQEERLQKVVETQV RFRELSAAEIAAYAATGEPSDKAGAYGIQGKAAAFVAAIHGSYTNVVGLPLAEVYEALKA VRVIV >gi|290780851|gb|ADGP01000028.1| GENE 7 6266 - 6955 750 229 aa, chain + ## HITS:1 COG:BH3032 KEGG:ns NR:ns ## COG: BH3032 COG2003 # Protein_GI_number: 15615594 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus halodurans # 1 229 4 229 232 196 44.0 4e-50 MSTLLRQSLTCDLPREKFVRHGTAGVTERDLLAILLRTGTRGLSVLELADAVLRQLPQEN IYYLGESSVADLCRIRGIGQDKAITLCAAVELGRRIAKQRVKQQAPDFSTPQAIAEYVME DMRTALQERFAVVFLSVKNRLITVQTLSVGTLNASLARARDVFRLAMQYNAASVVLVHNH PSGDPEPSREDILLTKQIVKAGEIMGIPVLDHIIIGDGTFVSLCERGHV >gi|290780851|gb|ADGP01000028.1| GENE 8 7115 - 8161 1318 348 aa, chain + ## HITS:1 COG:TP0291 KEGG:ns NR:ns ## COG: TP0291 COG1304 # Protein_GI_number: 15639283 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Treponema pallidum # 8 315 3 285 293 124 31.0 2e-28 MDMMEIRRRARQQQKGCHVCPQCDGRVCSGKIPGFGGMRTGRSFQRNIEALAAYGLVMNS MGGTLEPKTEVTLFDKTFAFPVLAAPLGAIALNCGWTENEEEREYEYVEAICGGAADCGL AACTGDGGLPFVYQAGIDMAGRFADTVIPTIKPRDDAAIITRIWRAVAAGALAVACDIDA ATLINMRLLGQPVEPKSPESIEAMVKASSLPFIVKGIMSPQEAQICVDAGVAAIVVSNHG GRALDGMAGTADVLPEIAAAVKGQIHIFVDGGVRHGEDVLKMLALGADAVLIGRPLAIAA IGGGREGVKIYLKNLYRELCDAMLITGVTDINQVDISILRKLTPREGT >gi|290780851|gb|ADGP01000028.1| GENE 9 8286 - 8426 95 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKHIITINTESIQKTAQHAGCSECQTSCQSACKTSCTVGNQVCNK >gi|290780851|gb|ADGP01000028.1| GENE 10 8476 - 9903 1600 475 aa, chain + ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 13 459 3 452 454 407 44.0 1e-113 MWGGTMAGIIKPMIHKYCQNGTYMLLDVNSGIINVIDKMTYDVLDVYDGTNKEAVYRAFA DTYGTQELGETLEELDELIKEELLFAPMCQSFEVVAKERPIVKSLCLNIAHDCNLRCQYC FASQGDYDTHKRELMSFDVAKHAVDLLIRSTEGKRQHCEIDFFGGEPLMNFGVVKQTIAY IREQEKKHNKVFKLSLTTNGMLLDPEKVRFLTDNHISLILSLDGRPEVHDRMRPCAGGGG SYKKCAENLAYAVSHRRGEEYYVRGTFTKYNLDFTEDVAHMADLGFDGLSMEPVVGDEAS YAITEEDLPRIYEEYDRLTAFYLQRYFSGHPIIYYHFIMDLYRGPCIAKRLRGCGAGHEY MCVTPDGNIYPCHQFVGQEEYILGNVYDGITNDVLPPVFRDTHVLNKERCCACWAKFFCS GGCHANNIKYGGNIETPFELSCKIQKKRIECAMYIQATLAIKRQEAEARKERKQS >gi|290780851|gb|ADGP01000028.1| GENE 11 9900 - 10097 245 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969101|ref|ZP_06560631.1| ## NR: gi|290969101|ref|ZP_06560631.1| hypothetical protein HMPREF0889_0418 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0418 [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 105 100.0 8e-22 MTKLKQFLWAVVLCYLAYAIYKEGLQWKPVVLMVLAILAVLLEIWKATPQYKKMRERYFS QNRED >gi|290780851|gb|ADGP01000028.1| GENE 12 10319 - 11065 167 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 224 1 215 305 68 28 3e-11 MSELLRVEGLKIAVEGKEILKGLDLTVRTGEIHVIMGSNGAGKSTLFNAVMGNPNYVVTA GHIFFEGKDITAEPVNERAKDGIFMAFQAPIAVQGISVENFIRNAKGTITGETQRIMPFR KKLHKQMDALSMNRSYAQRYVNDGFSGGERKKAEILQMCMLEPKLTMLDEIDSGLDVDAV RIVSETVAQYHNAENSILVITHHSEILQKLKPDFVHILIDGRIVKTGDASLIKEIEANGY DAYKTKAK >gi|290780851|gb|ADGP01000028.1| GENE 13 11080 - 12507 1684 475 aa, chain + ## HITS:1 COG:CAC3289 KEGG:ns NR:ns ## COG: CAC3289 COG0719 # Protein_GI_number: 15896534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 23 474 15 466 466 714 73.0 0 MADTKELEEEREKIQSLSDMGNMYNFRKDFKYSYKTDAGLTPDIVREISEKKEEPEWMLQ FRLKSLELFYKIDYPDWGPDISELDMDNIVTYVRPDANMKANWNDVPEDIKDTFDRLGIP EAEKTSLAGVGAQYDSEVVYHSIQEDLVKQGVIYTDFDTALKQYEDNVRRHFMKLVPPTD HKFAALHGAVWSGGSYVYVPEGVDVEIPLQSYFRLNAPGAGQFEHTLIIVEKGAKVHFIE GCSAPKYNVANLHAGCVELFIGDDATLTYSTIENWSKNMYNLNTKRAIVGKNGTINWVTG SFGSHTSCLYPMSILNGEGAHCEFTGVTFAGKGQYLDTGSKVIHNAPRTTSNINSKSISK DGGVCIYRGSVVVKKNAEGSKATVSCESLMLDEASQSDTIPAIVVDTDNIDLGHEAKIGR ISDEAIFYLMSRGLSEDEARAMLVRGFVEPVSKALPLEYAVEMNNLINLELKGSM >gi|290780851|gb|ADGP01000028.1| GENE 14 12525 - 13622 1274 365 aa, chain + ## HITS:1 COG:CAC3290 KEGG:ns NR:ns ## COG: CAC3290 COG0719 # Protein_GI_number: 15896535 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 5 355 6 364 366 187 32.0 3e-47 MLQKEEYNQLPRPTFRWMKVNHLELATLPSVATTHVEVPERHTEEVQVDFYKENRIPSFS DFEGANPRVMELALHQHNTGCQVTIGAQKKGSVWLHYTVDDKSPQIHGQLYVKAGAHSEL NVFITFDGDAEDGEVNLFQYIEAAVGAKVKVSKLQLHGDRVRHIDHRLAKPEQQAYVEFD SVDLGGKEVLVYYKGDLAKDEGECNIYSTYIGAGKQLFDFSYVVPTAGVKTKTDILNTGA LMETAKKYFRGTIDFLRGGKKAFGSESDVCLLLSPTVHSISIPLLLCKEDDVVGNHASSA GQIDKDMLFYLMSRGFDEAGAQLILVESNVRPIIDKLGDAEMEEKALQSVRDKMQICYKK GELNA >gi|290780851|gb|ADGP01000028.1| GENE 15 13615 - 14835 1420 406 aa, chain + ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 7 404 8 406 408 447 55.0 1e-125 MRNVRNDFPILKKVHNGHQIVYFDNAATTQKPLQVIHAIVELLEYHNGNPHRGAHILSVE AGTLYDEARLAVQRFIHAPSVDEIIFVRNTTEALNLIARSYGETHLQKGDKIVIPISEHH SNLVTWQRVCAETGAELVYMYLDEAGHFTPEDLEKIDEHTKIVAFAAVSNVYGMKRPVKE LVAKAHAVGAVAVVDGAQSTPHMKTDVQDMDCDFYVFSGHKMCGSAGTGVLYGKKALLED MEPFLLGGDMIEYVAEQQTTYNVLPYKFEAGSQNVEGAVALKAAIEYLEDLGMEEIERHE HVLTARCLTGMQKIPHIHLIGSTDASEKTGVISFTIDGVHPHDAATILDSFGIAVRSGHH CAQPLGAHLGIEASNRASFYIYNTEEEVDYFLEKLPLVRKQMGYKD >gi|290780851|gb|ADGP01000028.1| GENE 16 14853 - 15287 647 144 aa, chain + ## HITS:1 COG:CAC3292 KEGG:ns NR:ns ## COG: CAC3292 COG0822 # Protein_GI_number: 15896537 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 3 144 2 143 143 178 64.0 4e-45 MENMNELYSDIILEHNQCQENKHPLADANIHEHGHNPSCGDDITLQVKVANGMIQDAAYT GQGCAISQASADIMIDLIKEKSVSEALRLVKLFLDMIKREVTDEDTLEELEDAIALKNIS NMPARVKCAVLAWHTLQEALEKNK >gi|290780851|gb|ADGP01000028.1| GENE 17 15681 - 17936 2503 751 aa, chain + ## HITS:1 COG:SA0218 KEGG:ns NR:ns ## COG: SA0218 COG1882 # Protein_GI_number: 15925929 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Staphylococcus aureus N315 # 7 749 11 747 749 950 61.0 0 MVLENKGWEGFTGRLWREECNVRDFIQNNYQPYEGDERFLQAPTEATDILWGKVQEYQKA EREHGGVLKEETEIVSSITAYGPGYIDPQMKELEKVVGLQTDEPLKRAFMPYGGIKMAEE ALEMYNYKLNPELHKVFTEYHKTHNEAVFDAYTKEMLQARHTHIITGLPDAYARGRIVGD YRRVALYGIDQLIAWKERDKEYNDDGIMTDNVIRLREEIAEQIKALKQMKELANIYGYDI SKPATNAREAVQWLYFGYLAAIKTQNGAAMSVGRISTFLDIYIERDLAAGEITEQEAQEL IDHLTLKFRIVKFARIRSYNELFSGDPIWATLEMAGIGMDGRSMVTKTDFRFLHTLENMG PAPEPNLTVLYSSQLPHPFKKYAAHISDTTSSIQYENDDVMKPVWGDDYSICCCVSATQT GKEMQFFGARANLAKALLYAINGGVDEKFGIQAGPELAPITSEYLDYDEVVHKYKLMLDW LAGLYVNVLNTIHYMHDKYYYEAAEMALLDTKLRRTFATGIAGFSHVIDSLSAIKYAKVK VIRNDKGLAEDFQVEGDFPKYGNDDDRADEIGVAVLREFMDDIRKRHTYRDSEATTSILT ITSNVVYGKFTGNLPDGRRAWKPFAPGANPSYGAEEKGLMASLNSVAKLPYTWALDGISN TQSIIPEALGHNEEERAENLVHVLDGYFDQGAHHLNVNIFGKEKLLDAMEHPEKPEYANF TIRVSGYAVKFISLTKEQQLDVIARTFHEKR >gi|290780851|gb|ADGP01000028.1| GENE 18 18022 - 18771 844 249 aa, chain + ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 7 245 13 250 264 285 56.0 8e-77 MMNTYPGKIYATESFGAVDGPGVRFIVFLQGCRMRCRYCHNPETWQEGKYSSYTLQYASD ILREALRYRTYWKNGGGITVSGGEPLLQPDFVRELFTLAKERGIHTVLDTAGNPFTTAEP FFSKFKKVCEVTDLFMLDLKEMNEQKHQKLTGQTNKNIHDMARYLSKHGHAMWIRHVLVP GWTDTKENLTALHDFIYTLHTVKRVEILPYHTMGTVKWEKLQLPYTLSAVVPPTEAEIIR AKQLIGAFD >gi|290780851|gb|ADGP01000028.1| GENE 19 18973 - 20427 1507 484 aa, chain + ## HITS:1 COG:CPn0385 KEGG:ns NR:ns ## COG: CPn0385 COG0260 # Protein_GI_number: 15618300 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Chlamydophila pneumoniae CWL029 # 59 483 65 499 499 270 36.0 5e-72 MFTCNGNNTMDTWVIGVDKRMKWAACVPAAAATQIKAYVQQREDVLTYGAVTGMQCCIEG RMKTYFLVGQEKEGQADDFAAYMTARHIMAAAMKVGCKELAVYVDTLTMKLESLLDGLLY QNYEFIHYKKQKKSCTVGSVNLITACLRVKEVNSLCYKYSSMYEGIYAARDFVNMPPNEL TPRKFADAISELLQGDTVRVACMNKWAVEKLQMGGIIAVGKGSMNPPQVVTVYYEGDAES KEVLGLVGKGVTYDSGGLSLKSAANQEFMKDDMAGAATVVGVLRALMLLKYPVNIVAVLP LVENIPSGMAYHVDDIITMYNGLTVEVKNTDAEGRLILADALTYAQEKGATKLIDLATLT GACVTALGTVRTGMIGNQQEWMNTFFRIAEKNHEKIWQLPSDAAYDKALQSRVADLKNTG GREAGAITAGMFLKHFVRPSVPWLHLDIAGTAFQETPDETGYYGATGVGVKAILEVLRGG RSEG >gi|290780851|gb|ADGP01000028.1| GENE 20 20435 - 21232 787 265 aa, chain + ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 1 233 16 250 266 140 35.0 2e-33 MHTTCSDGVYTPQELIRRAAQANIRILAITDHDTVEAHVSGYTRSQEVEVIRAIEMSSRY GEEDVHILGYDIDVRNQALQSYCRDYSQRRKIRARRMFQRCLDLGYTLDAQAFEALLAKK GSVGRPHIARLLIEKGYFTEVGEVFHAILHRGAPAYVPYERESIAACIQLIHQAGGMAVL AHPGLIADGLEAVLQYPFDGMEVYHPKQRGYFDTYEKLACGHHFLMTGGSDYHGTKGRFP ENVGGFTVESGQIEAFLQARQRSNA >gi|290780851|gb|ADGP01000028.1| GENE 21 21229 - 22113 878 294 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0868 NR:ns ## KEGG: Vpar_0868 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 276 1 287 291 241 43.0 2e-62 MKIMGLIGPSGTGKSHHALVVAYEQHLNCLLDDGLLIYHNRIIAGISAKEETNRMQAVRR AIFLDPVHRAQVRQAIEKIQPAGLLILGTSAHMVQRICENLQLPSPLSFISITDVSCAAD IAEAQRLRKEEGKHIIPVPVLELRPHFRGYLLDPVRSWWQGRNGRKAVERSVVRPLFSYY GTLSFANTVPAELVRHCVQQLSFIAAVHKVHIDKRKHSERNGIMVTVQVSVYYGVEIKKE MVRMKQVIQEEIEYSTGMVVEVLEITVRHIVVRRQKHRENMENKLKTAGLPDSR Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:05:58 2011 Seq name: gi|290780849|gb|ADGP01000029.1| Megasphaera genomosp. type_1 str. 28L contig00029, whole genome shotgun sequence Length of sequence - 901 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 900 972 ## gi|290969113|ref|ZP_06560642.1| conserved domain protein Predicted protein(s) >gi|290780849|gb|ADGP01000029.1| GENE 1 3 - 900 972 299 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969113|ref|ZP_06560642.1| ## NR: gi|290969113|ref|ZP_06560642.1| conserved domain protein [Megasphaera genomosp. type_1 str. 28L] conserved domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 299 1 299 299 411 100.0 1e-113 KINVAVGGDNDAPTVTVGLAKTFTDSVANNTTNISNITNKLTAGFKLAGGTGEGNVSLGG ETAPTVTFAGDANITSKVDGTTITYGLNNALTNMNSITFAAPTAQVGKTSKALTIDGKKG TITGLTNTTWNAEIPDDLDLSQAATQGQLKELQQSIKTTSEQLSGKSDFALERGTYKVNN GNVTLKVKNGNAKGDSSYDVTIQDVASAQATTDALNTKANKDATNIDSSVWLTKLGLTDA MHGFKVKAGTGAEQEIKNGNTVTFDADTDKGLTVSREGNTIKYGIEGSKIDLTNNTAIT Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:06:17 2011 Seq name: gi|290780834|gb|ADGP01000030.1| Megasphaera genomosp. type_1 str. 28L contig00010, whole genome shotgun sequence Length of sequence - 11788 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 4, operones - 2 average op.length - 6.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 171 - 230 9.4 1 1 Op 1 . + CDS 273 - 1049 952 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 2 1 Op 2 . + CDS 1049 - 1693 609 ## COG0546 Predicted phosphatases + Term 1696 - 1762 15.1 - Term 1694 - 1735 9.6 3 2 Op 1 . - CDS 1784 - 3016 1393 ## Vpar_0562 DNA repair ATPase-like protein 4 2 Op 2 12/0.000 - CDS 3003 - 3938 1001 ## COG1481 Uncharacterized protein conserved in bacteria 5 2 Op 3 12/0.000 - CDS 3948 - 5294 1598 ## COG0391 Uncharacterized conserved protein 6 2 Op 4 . - CDS 5310 - 6212 1032 ## COG1660 Predicted P-loop-containing kinase 7 2 Op 5 . - CDS 6224 - 7033 689 ## COG0561 Predicted hydrolases of the HAD superfamily 8 2 Op 6 . - CDS 7030 - 7404 311 ## gi|290969122|ref|ZP_06560650.1| hypothetical protein HMPREF0889_0129 9 2 Op 7 6/0.000 - CDS 7470 - 7976 797 ## COG3599 Cell division initiation protein 10 2 Op 8 . - CDS 8023 - 8808 223 ## PROTEIN SUPPORTED gi|57866705|ref|YP_188339.1| ylmH protein 11 2 Op 9 14/0.000 - CDS 8818 - 9330 651 ## COG1799 Uncharacterized protein conserved in bacteria 12 2 Op 10 7/0.000 - CDS 9344 - 10075 654 ## COG0325 Predicted enzyme with a TIM-barrel fold 13 2 Op 11 . - CDS 10152 - 11000 723 ## COG1496 Uncharacterized conserved protein - Prom 11181 - 11240 6.5 14 3 Tu 1 . + CDS 10968 - 11180 97 ## + Term 11286 - 11321 2.2 - TRNA 11078 - 11168 57.6 # Ser GCT 0 0 - Term 11025 - 11071 7.1 15 4 Tu 1 . - CDS 11250 - 11624 253 ## gi|290969128|ref|ZP_06560656.1| integrase core domain protein - Prom 11659 - 11718 2.2 Predicted protein(s) >gi|290780834|gb|ADGP01000030.1| GENE 1 273 - 1049 952 258 aa, chain + ## HITS:1 COG:alr3187_1 KEGG:ns NR:ns ## COG: alr3187_1 COG0834 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Nostoc sp. PCC 7120 # 1 256 1 253 261 158 34.0 9e-39 MNKKYFAAAAVAITTVAFAAGCGSSPSSQENTDKTFTVGLEPTFPPFEFADNDNFKGFDI DFAQAICDKMGVKLEIKNMGFDALIPALKSGQIDMIASGMDATPERSKQVAFTKPYFHDG YVVVVRKDNTAIQGFESLAGKTVGSQVGTQGVDLGQAAGAKVKQYDANSQGWMELNNKTC DAVIINKSVALYYLQQGGNKDLKIAGKAKLAPDPVALALQKGNDAQLAKVNKAIDDLKAD GTYAKLYKKWFGTEPPKE >gi|290780834|gb|ADGP01000030.1| GENE 2 1049 - 1693 609 214 aa, chain + ## HITS:1 COG:MA2967 KEGG:ns NR:ns ## COG: MA2967 COG0546 # Protein_GI_number: 20091785 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Methanosarcina acetivorans str.C2A # 2 210 65 272 279 146 39.0 3e-35 MYSAYIFDFDYTLVNSEEGIAMCFDMLFADEGYAPVPRPEIYATIGMPMYEAMAKLTGEK NSERILELIHLYKIRYSDFYMVSNTHLYEDAKSTLQFLTEKGASCYIVSSKTRSRIQETI VKENLTAFIHGIIGVEDVQTPKPSPEGIKLLCRRYDIVPDACLYIGDSTIDAQTAANSGI DFAAVTTGVTPATAFANFPHIKIMQHLQELTTLL >gi|290780834|gb|ADGP01000030.1| GENE 3 1784 - 3016 1393 410 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0562 NR:ns ## KEGG: Vpar_0562 # Name: not_defined # Def: DNA repair ATPase-like protein # Organism: V.parvula # Pathway: not_defined # 26 363 26 375 1015 183 33.0 1e-44 MRKSKWYTYVSIGLIWLGVVGIVQAASPADMDVMKYISRSSMTPMAMQPPVDTGTLLFSD SPEYAGADGILYADKVAGNARLYFYHVNDNAYDRKIVAVAYNPSSKLVIAQVKNCQYAQP DTSYYKVGKELSTGYYKNAPAAGGVVIMPQDYALLSEALNTVTVHPAELFSGILDIHTSS PLVISSVIMPVEEDPISFMKQQVYLPSDRSKLRGTFRGKDRLLKTLIPYMTQIGTGYIKL GDNVFDRFLQGWDSMDRRYTDDRGNYGVDYTIQVQTEGEGNIHLYFNPQGGAYAGVAEII YNKGTRKEHKKIVSLPEHTLSLGNKDMYAIQYVDTFSAGQEVTLHVMPPGAANLPVRFIF VPEKNYRQAVQAVAAQHTDTPGAEEMPGAAAEGPAYAAGNARIQQLLAEL >gi|290780834|gb|ADGP01000030.1| GENE 4 3003 - 3938 1001 311 aa, chain - ## HITS:1 COG:BH3567 KEGG:ns NR:ns ## COG: BH3567 COG1481 # Protein_GI_number: 15616129 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 301 1 306 320 195 41.0 1e-49 MSFAEEVKNEIAHYKTWDAACRNAELSALLWMGGEVLRGSRGQLGIAFTTSHNAVARRVL QMWRQAFSIRPEVRVRKGLRLRKRNYYIVQIPPSAAGAAALQALAVWPENKEAAPLSLTG TEVQRAFLRGAFMGNGSVNQPKGDYHLEIVTTRLFLAKVVLRLMKRFHLPARMTDRKGAY LVYIKEGNGVADFLQQIGATQAYLQFESVRVVKEMRNNVNRVVNCETANLQKTVDAAVKQ RRNIEILQAVGKYGKLSLKLQEAAELRLANPEATLSELAAKSGLTKSGLSHRFKKIALWA ENEGQHKNEKK >gi|290780834|gb|ADGP01000030.1| GENE 5 3948 - 5294 1598 448 aa, chain - ## HITS:1 COG:sll0154 KEGG:ns NR:ns ## COG: sll0154 COG0391 # Protein_GI_number: 16331280 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 2 421 37 456 462 357 42.0 3e-98 MRVFKWLHPGLQIKRWLFLFGLGMMATSFGLVLMFNYQWLAQMEEWMFRVLYEVTGHYNY TVLASCGIAIVILGIIIMSVATRRLIRTMVGVVIPNESGNISELILSNLQRTKGPKVVVL GGGTGLSIMLRGLKTKTYNLTAIVAVADDGGSTGRIRQDLDIIAPGDLRNCMVALAEKEG LMEKLFAHRFGGSGNLTGHSFGNLFIAALIEVLGDVEEAMEAASKVLKVRGKVIPSSSDK IFLHAEMNDGRIVNGESQIPLAQGKIKRIFTTPAQPQAIQSAIEAIRCADAVVLGPGSLY TSIMPNLCVPEIVQALCECNAKKIYICNVMTQRGETDSYTVADHVRAIHRQVGCHLIDFV VANNGNIDTAILQKFVSQGAHPVQIDKKAVQAEEAVLILADLVNPVSGITHDTTKLANVL LDLINAMRTDLSPELLQYYLKRFNKKHR >gi|290780834|gb|ADGP01000030.1| GENE 6 5310 - 6212 1032 300 aa, chain - ## HITS:1 COG:CAC0511 KEGG:ns NR:ns ## COG: CAC0511 COG1660 # Protein_GI_number: 15893802 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Clostridium acetobutylicum # 6 288 3 286 294 303 50.0 2e-82 MEYFHLIIVTGMSGAGKSHAVQVLEDMGYFCIDNIPPVLIPKFAELCIQGGQRVRNVALI ADIRGGEFFDAVSQSLKELKEQHISYEILFIEASDQVLVRRYKETRRVHPLAPHERPVQG ISLERKRLSALRCQADTIIDTSNLTPKELKDLIMKKYAIHERKKSIDVTIVSFGFKHGMP IDADLVEDVRFLPNPYYVEEYRNKSGRVPAVREYVEGFAVTAAFKEKWFDMIDFLLPHYE REGKSQLVIAVGCTGGMHRSVCMAEALYKHLRDNKIAVSIEHRDLQKNEVEEDAPGYEGM >gi|290780834|gb|ADGP01000030.1| GENE 7 6224 - 7033 689 269 aa, chain - ## HITS:1 COG:alr3950 KEGG:ns NR:ns ## COG: alr3950 COG0561 # Protein_GI_number: 17231442 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Nostoc sp. PCC 7120 # 6 269 2 271 271 129 32.0 7e-30 MKDRKIRLIASDLDGTLLRRDGTISARTQAALQNARAAGIVVTLATGRMYGTAVPYAEQL QLGDVPLVLYNGGLIQNAKSREIIYCKTISSAAAIALLQLFKQEGWQIQAYIKDQVYVPE RCAWVKTYEQRTHCRTVVMGSAFYTLKEAPMKFVSRSTYEELERRRKCIEAIFPKQFAFT YSDPTFLEIMPRYVSKGQGLCFLCKQLKILPAEMMVFGDSQNDLSMFSTGAFSVAMGNAS AAVKSMAVAVTATNEQDGIADMVERYVLT >gi|290780834|gb|ADGP01000030.1| GENE 8 7030 - 7404 311 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290969122|ref|ZP_06560650.1| ## NR: gi|290969122|ref|ZP_06560650.1| hypothetical protein HMPREF0889_0129 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0129 [Megasphaera genomosp. type_1 str. 28L] # 5 124 1 120 120 236 100.0 4e-61 MEEGMIKKIASLVFMASFLCAGASAYNPYAPNQFAIVQHNEWEYRAGMKLFQSGLIPEGA NKFSPSYALTRFELTQLVALAVHRRNKADKDIQTLIDSLQRDLQNDLAYVDPSIPALRQK GPSA >gi|290780834|gb|ADGP01000030.1| GENE 9 7470 - 7976 797 168 aa, chain - ## HITS:1 COG:CAC2118 KEGG:ns NR:ns ## COG: CAC2118 COG3599 # Protein_GI_number: 15895387 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Clostridium acetobutylicum # 2 165 5 168 205 100 39.0 2e-21 MLTPMDIHNKEFKRGFRGYSEEDVDAFMEDIAGDYEKVFRENCELKEQNEKIQDKLNQYE KMEKTMNNTLMLAQQTADNAKVTAQKEADLILQEANNKSKQMMDETLLNLQKSRQELDKL TAQIRAFREKCRAILSSQLRLLDDMTLEGKNKEEVSGDSAEKDKDHNR >gi|290780834|gb|ADGP01000030.1| GENE 10 8023 - 8808 223 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|57866705|ref|YP_188339.1| ylmH protein [Staphylococcus epidermidis RP62A] # 42 252 1 210 220 90 29 5e-18 MKNKERLVRYYQGTDNGALAARLIELAEYVCKGRPYAVSDFVSPGAVQIGETICAQDTDV HLQCDGGYEGAERVRMAFVRNGYEGAVDFSIRACRLVWDSRYRLLTHRDVLGSLMGLGVE RAKFGDIIMAEDGAVLLLDANMESYVQQHLQKVSIVTVQIAPYDLKEIAPRQKKVKEIKT TVASLRLDAIVASGFGISRTKAAAAIKGERVQLNWQPIKSSSREVRVGDCISLRGKGKME VGEITGISRKGRTGVLLKRYI >gi|290780834|gb|ADGP01000030.1| GENE 11 8818 - 9330 651 170 aa, chain - ## HITS:1 COG:BH2549 KEGG:ns NR:ns ## COG: BH2549 COG1799 # Protein_GI_number: 15615112 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 22 138 9 133 149 83 38.0 2e-16 MGLKGLLNRTANLLGGGSQDEFETDDYGYETDEYEAEEERQVQPRRNSLAAHAGNNAGYP TRQEKKLQMMIVEPESFSDAKTIADYLRQRKPVVINFEATDSEVTKRVIDFVSGATYAVD GRIQRVGKDIFLCAPDNILIDKGKPDYSGFSATPPSFSMPADNHDGSSQT >gi|290780834|gb|ADGP01000030.1| GENE 12 9344 - 10075 654 243 aa, chain - ## HITS:1 COG:TM1731 KEGG:ns NR:ns ## COG: TM1731 COG0325 # Protein_GI_number: 15644477 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Thermotoga maritima # 18 238 3 225 229 171 43.0 1e-42 MCRVLSVLYKTFGGNALIKENIEFVRKKIQAAADRVGVNDKITLVAVTKNHPVSCMREAA SAGITQVGENRVQEALQKQKDFPNNTLTWHLIGHLQTNKAKAAVAHFDLIHSVDSEHLLL AVQKAAAQIGKIQPVLLQVNVAREESKYGMAVEEFPHICRLASSLSHVCVQGFMCIAPNV AQVEEVRPVFRIAHALYEDMKQKFPTGQIRYLSMGMTHDFEIAIEEGANIVRVGTAIFGE RNY >gi|290780834|gb|ADGP01000030.1| GENE 13 10152 - 11000 723 282 aa, chain - ## HITS:1 COG:BS_ylmD KEGG:ns NR:ns ## COG: BS_ylmD COG1496 # Protein_GI_number: 16078601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 40 278 33 272 278 166 37.0 4e-41 MDEKERDMEKHVSRTIWVTHKNGISLEAGRKMNEMGFCHGVTGRGGGVSKAPYDSFNVAL HVGDDPKAVLENRRRLCQVIGCSLPDITMAKQTHEDHIVAVSAAERGCGAGSYATALDHT DVLMTDEKYTPLLICVADCVPIILYDFHRPACAVIHAGWRGTAARIAAKTVFAMTVAYGS RPEELFAFIGPSISAAHFEVSRSTADIFKKSGAMYASCVYDGEGARTVDLWKVNQLQLKE AGLREEHIAMTRFCVFSHADKFFSYRRDGGITGRMAAFAMLS >gi|290780834|gb|ADGP01000030.1| GENE 14 10968 - 11180 97 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFLHIALFFIHSILIAPTFPIKKRQRTQNDLKSLSLFGGVGEIRTLATLTSPNDLANRPL QPLEYHSLIN >gi|290780834|gb|ADGP01000030.1| GENE 15 11250 - 11624 253 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|290969128|ref|ZP_06560656.1| ## NR: gi|290969128|ref|ZP_06560656.1| integrase core domain protein [Megasphaera genomosp. type_1 str. 28L] integrase core domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 124 55 178 178 247 100.0 2e-64 MELEEKMGFPIRMIQVDNGYEFVNDDERTAKDSAFEKIAKALHMELRRIGPYSPWQNGNV ERSHREDGKILYGRKVVTSEQELIRQAAKHEAGYNKTAKTGLTFKNSNQVVSEYFSTCNL CVDN Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:06:44 2011 Seq name: gi|290780832|gb|ADGP01000031.1| Megasphaera genomosp. type_1 str. 28L contig00004, whole genome shotgun sequence Length of sequence - 1653 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1652 1571 ## gi|290969130|ref|ZP_06560657.1| hypothetical protein HMPREF0889_0101 Predicted protein(s) >gi|290780832|gb|ADGP01000031.1| GENE 1 2 - 1652 1571 550 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969130|ref|ZP_06560657.1| ## NR: gi|290969130|ref|ZP_06560657.1| hypothetical protein HMPREF0889_0101 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0101 [Megasphaera genomosp. type_1 str. 28L] # 23 550 1 528 529 628 99.0 1e-178 NGKTAITNISTGFTVSDGNNKPVDMAMTKDKKPNLQFVSKDENTEVTAEKTDDGTKVTIG LSAAAQQGLANQDLNFAGKNGTGKVNLKTQTLSITGDADGIISTTATGQGLSMTVDKEKL ASTVTNTINNNTNATAITNISAKFSVTDGKNTKAVNLGKGKNNNVKFVGEAGKIKVAVGG DNDAPTVTVTADADLGKNIDISGNTAITNINKTLKADKATVVAGDYVTVTTTPNAETGNT FTVKGPKITGEGSVSVSDIKEGGKKVGYKITGKNTTLAKGTSGLSVADGKLKLNVADTDN NTVTGEVDLKTLDLSGNTTINNLDTKIENITKTGGLLDKKADKDAGNIGDVERTAWATKL GTGKVEADNANLVTGKTVYDFVNPVKTQAETNKADIATLQKGFTLKDSGTGSTTVKAEST VTVTGDTYVKATVNDKGLTLGLNEDALNSQINTQITSNSTVTGKMDSWQLAAKSTDDGEK IDNTNNKAVFDVTEADKGLTVTRDKNTIKYGIDADKLASTVTNSINNTTNATAITNISAK FSVTDGANTK Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:07:09 2011 Seq name: gi|290780830|gb|ADGP01000032.1| Megasphaera genomosp. type_1 str. 28L contig00075, whole genome shotgun sequence Length of sequence - 534 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 532 673 ## Vpar_0042 hemagluttinin domain protein Predicted protein(s) >gi|290780830|gb|ADGP01000032.1| GENE 1 1 - 532 673 177 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0042 NR:ns ## KEGG: Vpar_0042 # Name: not_defined # Def: hemagluttinin domain protein # Organism: V.parvula # Pathway: not_defined # 3 176 1256 1447 2397 80 40.0 3e-14 SNDGKTRIIVKDGTQNNELATMNDGLKFMGDMGTEDKLKLNEQLKVTGGITENDKLSQAG NIGVTADGNKTLTLRLAKELTGLDGITFGSAGDALKIDGKNKTISNVGTITGLTNTTLTD NMQADQAASQGQLKEAIDKATDYRLVANESAADKKYSVSQDGEVALTVQDSKHIDKK Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:08:14 2011 Seq name: gi|290780639|gb|ADGP01000033.1| Megasphaera genomosp. type_1 str. 28L contig00036, whole genome shotgun sequence Length of sequence - 209420 bp Number of predicted genes - 191, with homology - 188 Number of transcription units - 64, operones - 45 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 14 - 1561 1524 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 1581 - 1632 7.3 + Prom 1595 - 1654 4.7 2 2 Tu 1 . + CDS 1686 - 3401 201 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 3498 - 3541 9.2 + Prom 3710 - 3769 9.5 3 3 Tu 1 . + CDS 3843 - 4148 457 ## Cphy_1196 hypothetical protein + Term 4217 - 4260 10.3 + Prom 4385 - 4444 8.8 4 4 Op 1 29/0.000 + CDS 4499 - 5287 1162 ## COG2086 Electron transfer flavoprotein, beta subunit 5 4 Op 2 . + CDS 5300 - 6301 1337 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 6332 - 6378 11.1 + Prom 6392 - 6451 5.0 6 5 Op 1 . + CDS 6488 - 6883 571 ## gi|290969140|ref|ZP_06560665.1| hypothetical protein HMPREF0889_0668 7 5 Op 2 4/0.000 + CDS 6895 - 9468 2832 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 8 5 Op 3 4/0.000 + CDS 9479 - 10321 1044 ## COG0266 Formamidopyrimidine-DNA glycosylase 9 5 Op 4 1/0.000 + CDS 10314 - 10934 754 ## COG0237 Dephospho-CoA kinase + Term 10963 - 11004 -0.2 + Prom 10937 - 10996 1.6 10 5 Op 5 . + CDS 11033 - 11512 555 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + TRNA 11528 - 11612 59.0 # Leu CAG 0 0 + Prom 11538 - 11597 80.4 11 6 Op 1 . + CDS 11622 - 12347 339 ## Vpar_0781 hypothetical protein 12 6 Op 2 32/0.000 + CDS 12348 - 12884 458 ## COG0779 Uncharacterized protein conserved in bacteria 13 6 Op 3 22/0.000 + CDS 12906 - 14024 773 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 14 6 Op 4 8/0.000 + CDS 14100 - 14294 213 ## COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination 15 6 Op 5 10/0.000 + CDS 14291 - 14605 176 ## PROTEIN SUPPORTED gi|90961547|ref|YP_535463.1| 50S ribosomal protein L7AE 16 6 Op 6 32/0.000 + CDS 14619 - 17045 2924 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 17 6 Op 7 4/0.000 + CDS 17060 - 17407 587 ## COG0858 Ribosome-binding factor A 18 6 Op 8 1/0.000 + CDS 17411 - 18355 1003 ## COG0618 Exopolyphosphatase-related proteins 19 6 Op 9 12/0.000 + CDS 18352 - 19230 836 ## COG0130 Pseudouridine synthase 20 6 Op 10 . + CDS 19244 - 20206 388 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Term 20211 - 20270 20.1 - Term 20206 - 20251 16.7 21 7 Op 1 . - CDS 20288 - 25570 4944 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins 22 7 Op 2 . - CDS 25588 - 25836 223 ## Vpar_1342 TonB-dependent receptor plug - Prom 25876 - 25935 7.8 + Prom 25846 - 25905 9.0 23 8 Op 1 . + CDS 26142 - 26294 69 ## gi|290969157|ref|ZP_06560682.1| hypothetical protein HMPREF0889_0686 24 8 Op 2 . + CDS 26263 - 27438 1154 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 27583 - 27624 6.4 - Term 27569 - 27612 -0.8 25 9 Op 1 . - CDS 27630 - 28181 499 ## COG0622 Predicted phosphoesterase - Prom 28209 - 28268 3.0 - Term 28207 - 28244 4.1 26 9 Op 2 . - CDS 28271 - 28789 517 ## Cthe_2458 hypothetical protein - Prom 28838 - 28897 6.9 + Prom 28724 - 28783 9.1 27 10 Op 1 . + CDS 29010 - 29681 891 ## COG0546 Predicted phosphatases 28 10 Op 2 . + CDS 29681 - 32602 3107 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like 29 10 Op 3 . + CDS 32616 - 33566 949 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 33603 - 33647 10.1 + Prom 33644 - 33703 6.2 30 11 Op 1 29/0.000 + CDS 33727 - 34167 531 ## COG2001 Uncharacterized protein conserved in bacteria 31 11 Op 2 . + CDS 34176 - 35108 1125 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 32 11 Op 3 . + CDS 35148 - 35531 491 ## gi|290969166|ref|ZP_06560691.1| putative cell division protein FtsL + Term 35543 - 35577 6.0 33 12 Op 1 26/0.000 + CDS 35630 - 37129 1808 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 34 12 Op 2 28/0.000 + CDS 37132 - 38508 1445 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 35 12 Op 3 28/0.000 + CDS 38514 - 39491 1194 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 36 12 Op 4 4/0.000 + CDS 39520 - 40884 1512 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 37 12 Op 5 26/0.000 + CDS 40916 - 42052 1309 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 38 12 Op 6 11/0.000 + CDS 42055 - 43443 1686 ## COG0773 UDP-N-acetylmuramate-alanine ligase 39 12 Op 7 . + CDS 43443 - 44384 1043 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 40 12 Op 8 . + CDS 44412 - 45302 652 ## Vpar_1110 polypeptide-transport-associated domain protein FtsQ-type + Prom 45318 - 45377 10.1 41 13 Op 1 . + CDS 45426 - 46451 1441 ## COG0206 Cell division GTPase + Term 46465 - 46496 3.2 42 13 Op 2 . + CDS 46520 - 46993 433 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 43 13 Op 3 . + CDS 47011 - 48495 1587 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase + Term 48500 - 48554 10.1 44 14 Op 1 . + CDS 48568 - 49098 405 ## COG0241 Histidinol phosphatase and related phosphatases 45 14 Op 2 . + CDS 49085 - 50116 920 ## COG0859 ADP-heptose:LPS heptosyltransferase 46 14 Op 3 . + CDS 50202 - 50786 776 ## Vpar_1106 hypothetical protein + Term 50802 - 50844 8.4 + Prom 50846 - 50905 4.2 47 15 Op 1 7/0.000 + CDS 50931 - 52088 940 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 48 15 Op 2 . + CDS 52085 - 53173 1102 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 49 15 Op 3 4/0.000 + CDS 53190 - 54992 2071 ## COG0481 Membrane GTPase LepA 50 15 Op 4 . + CDS 54989 - 56107 956 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 56396 - 56455 10.2 51 16 Op 1 . + CDS 56484 - 56897 473 ## Teth514_1169 thioesterase superfamily protein 52 16 Op 2 . + CDS 56911 - 57336 585 ## Teth514_1169 thioesterase superfamily protein 53 16 Op 3 . + CDS 57369 - 58511 1385 ## COG1960 Acyl-CoA dehydrogenases + Term 58710 - 58760 4.3 + Prom 58690 - 58749 4.8 54 17 Op 1 40/0.000 + CDS 58777 - 59802 1231 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 55 17 Op 2 . + CDS 59818 - 62250 2419 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Term 62289 - 62332 8.5 + Prom 62412 - 62471 9.9 56 18 Op 1 29/0.000 + CDS 62531 - 63856 1883 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 57 18 Op 2 24/0.000 + CDS 63875 - 64477 886 ## COG0740 Protease subunit of ATP-dependent Clp proteases 58 18 Op 3 18/0.000 + CDS 64489 - 65721 270 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 65736 - 65780 9.1 59 18 Op 4 4/0.000 + CDS 65795 - 68110 3059 ## COG0466 ATP-dependent Lon protease, bacterial type 60 18 Op 5 . + CDS 68112 - 68732 692 ## COG0218 Predicted GTPase + Term 68739 - 68778 10.7 + Prom 68966 - 69025 12.8 61 19 Op 1 11/0.000 + CDS 69209 - 71614 2626 ## COG1882 Pyruvate-formate lyase 62 19 Op 2 . + CDS 71640 - 72566 837 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 72608 - 72668 14.3 + Prom 72656 - 72715 4.0 63 20 Tu 1 . + CDS 72749 - 74077 1459 ## COG3579 Aminopeptidase C + Term 74194 - 74237 3.8 + Prom 74200 - 74259 9.3 64 21 Op 1 22/0.000 + CDS 74300 - 75340 1215 ## COG1077 Actin-like ATPase involved in cell morphogenesis 65 21 Op 2 . + CDS 75343 - 76263 1034 ## COG1792 Cell shape-determining protein 66 21 Op 3 . + CDS 76260 - 76772 658 ## Vpar_1225 rod shape-determining protein MreD 67 21 Op 4 . + CDS 76790 - 78622 2155 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 68 21 Op 5 1/0.000 + CDS 78637 - 79614 951 ## COG2894 Septum formation inhibitor-activating ATPase 69 21 Op 6 . + CDS 79625 - 80725 1306 ## COG0772 Bacterial cell division membrane protein 70 21 Op 7 . + CDS 80778 - 82211 1540 ## COG1530 Ribonucleases G and E + Term 82281 - 82312 3.4 + Prom 82300 - 82359 6.5 71 22 Tu 1 . + CDS 82411 - 83373 1021 ## COG0039 Malate/lactate dehydrogenases + Term 83404 - 83447 13.3 - Term 83387 - 83440 16.5 72 23 Op 1 . - CDS 83458 - 83787 358 ## COG0708 Exonuclease III 73 23 Op 2 . - CDS 83790 - 84224 452 ## COG0708 Exonuclease III - Prom 84287 - 84346 7.9 + Prom 84332 - 84391 10.0 74 24 Op 1 9/0.000 + CDS 84436 - 84708 404 ## COG3830 ACT domain-containing protein 75 24 Op 2 . + CDS 84721 - 86079 1924 ## COG2848 Uncharacterized conserved protein 76 24 Op 3 2/0.000 + CDS 86116 - 87159 1167 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 77 24 Op 4 . + CDS 87197 - 88351 1266 ## COG0381 UDP-N-acetylglucosamine 2-epimerase + Prom 88604 - 88663 5.9 78 25 Op 1 . + CDS 88751 - 89035 481 ## gi|290969215|ref|ZP_06560740.1| hypothetical protein HMPREF0889_0745 79 25 Op 2 . + CDS 89045 - 89431 392 ## gi|290969216|ref|ZP_06560741.1| hypothetical protein HMPREF0889_0746 80 25 Op 3 . + CDS 89435 - 90106 789 ## COG0356 F0F1-type ATP synthase, subunit a 81 25 Op 4 . + CDS 90157 - 90414 438 ## Selsp_1844 ATP synthase F0, C subunit 82 25 Op 5 38/0.000 + CDS 90463 - 90957 722 ## COG0711 F0F1-type ATP synthase, subunit b 83 25 Op 6 41/0.000 + CDS 90960 - 91526 753 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 84 25 Op 7 42/0.000 + CDS 91526 - 93061 1850 ## COG0056 F0F1-type ATP synthase, alpha subunit 85 25 Op 8 42/0.000 + CDS 93065 - 93925 954 ## COG0224 F0F1-type ATP synthase, gamma subunit 86 25 Op 9 42/0.000 + CDS 93965 - 95383 1676 ## COG0055 F0F1-type ATP synthase, beta subunit 87 25 Op 10 . + CDS 95387 - 95809 583 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 95824 - 95870 11.3 + Prom 95847 - 95906 7.1 88 26 Op 1 . + CDS 95933 - 96238 468 ## gi|290969225|ref|ZP_06560750.1| hypothetical protein HMPREF0889_0755 + Prom 96255 - 96314 8.4 89 26 Op 2 . + CDS 96421 - 96696 379 ## gi|290969226|ref|ZP_06560751.1| hypothetical protein HMPREF0889_0757 + Term 96746 - 96783 9.4 - Term 96485 - 96515 -1.0 90 27 Tu 1 . - CDS 96664 - 97998 1193 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase - Prom 98247 - 98306 5.4 91 28 Op 1 . - CDS 98464 - 99939 1394 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 92 28 Op 2 . - CDS 99936 - 100322 78 ## - Prom 100388 - 100447 4.3 + Prom 100313 - 100372 1.9 93 29 Tu 1 . + CDS 100407 - 100550 62 ## gi|290969229|ref|ZP_06560754.1| hypothetical protein HMPREF0889_0761 94 30 Tu 1 . - CDS 100571 - 101974 1037 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 102010 - 102069 5.8 + Prom 102051 - 102110 9.4 95 31 Tu 1 . + CDS 102136 - 102474 389 ## gi|290969231|ref|ZP_06560756.1| septum formation initiator + Prom 102485 - 102544 8.3 96 32 Op 1 . + CDS 102593 - 103024 352 ## PROTEIN SUPPORTED gi|227372859|ref|ZP_03856338.1| predicted RNA-binding protein with ribosomal protein S1 domain + Term 103049 - 103097 7.6 97 32 Op 2 . + CDS 103121 - 104053 1379 ## COG0248 Exopolyphosphatase 98 32 Op 3 10/0.000 + CDS 104050 - 105426 1082 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 99 32 Op 4 11/0.000 + CDS 105410 - 105949 697 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Prom 105952 - 106011 5.2 100 32 Op 5 . + CDS 106056 - 107996 1488 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 107999 - 108042 9.3 + Prom 108048 - 108107 7.7 101 33 Op 1 4/0.000 + CDS 108306 - 109292 1089 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase + Term 109300 - 109349 12.1 + Prom 109328 - 109387 5.1 102 33 Op 2 1/0.000 + CDS 109429 - 110193 1182 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 103 33 Op 3 1/0.000 + CDS 110177 - 111172 611 ## PROTEIN SUPPORTED gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase 104 33 Op 4 2/0.000 + CDS 111285 - 111770 763 ## COG0782 Transcription elongation factor 105 33 Op 5 . + CDS 111793 - 113325 1846 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 113508 - 113543 6.0 + Prom 113407 - 113466 3.6 106 34 Op 1 . + CDS 113566 - 113847 91 ## SZO_12680 membrane protein + Term 113880 - 113922 2.3 107 34 Op 2 . + CDS 113935 - 114714 870 ## SDEG_1349 hypothetical protein 108 34 Op 3 . + CDS 114711 - 115562 275 ## COG1484 DNA replication protein 109 34 Op 4 . + CDS 115559 - 116044 441 ## SEQ_0732 hypothetical protein 110 34 Op 5 . + CDS 116041 - 117825 1172 ## COG3505 Type IV secretory pathway, VirD4 components + Term 117931 - 117971 3.2 + Prom 117898 - 117957 4.5 111 35 Op 1 . + CDS 117993 - 118304 308 ## CD0413 putative single-strand binding protein 112 35 Op 2 . + CDS 118308 - 118448 284 ## CD1852 putative conjugative transposon membrane protein 113 36 Op 1 . + CDS 119089 - 121008 1044 ## COG0480 Translation elongation factors (GTPases) 114 36 Op 2 . + CDS 121059 - 121826 569 ## COG0500 SAM-dependent methyltransferases 115 37 Op 1 . + CDS 121998 - 122420 144 ## gi|237745701|ref|ZP_04576181.1| conserved hypothetical protein 116 37 Op 2 . + CDS 122413 - 122625 133 ## LAC30SC_09595 hypothetical protein + Term 122660 - 122707 11.3 117 38 Tu 1 . - CDS 122588 - 122866 68 ## gi|225019546|ref|ZP_03708738.1| hypothetical protein CLOSTMETH_03499 118 39 Op 1 . + CDS 123123 - 123521 245 ## LAC30SC_09585 hypothetical protein 119 39 Op 2 . + CDS 123493 - 125118 434 ## Tresu_1917 Relaxase/mobilization nuclease family protein + Term 125207 - 125253 -1.0 120 40 Op 1 . + CDS 126358 - 127200 536 ## COG1484 DNA replication protein 121 40 Op 2 . + CDS 127215 - 127409 215 ## Tresu_1913 hypothetical protein - Term 127413 - 127451 7.1 122 41 Tu 1 . - CDS 127474 - 127722 162 ## BMQ_3660 hypothetical protein - Prom 127760 - 127819 2.6 + Prom 127639 - 127698 6.1 123 42 Tu 1 . + CDS 127900 - 129516 1082 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 129519 - 129577 5.2 + Prom 129558 - 129617 2.6 124 43 Op 1 . + CDS 129719 - 130582 605 ## CD0415 hypothetical protein 125 43 Op 2 . + CDS 130600 - 130863 328 ## SZO_12880 hypothetical protein 126 43 Op 3 . + CDS 130867 - 131256 258 ## CD1855 putative conjugative transposon membrane protein 127 43 Op 4 . + CDS 131168 - 133597 1532 ## COG3451 Type IV secretory pathway, VirB4 components 128 43 Op 5 . + CDS 133601 - 135733 495 ## CDR20291_1791 hypothetical protein 129 43 Op 6 . + CDS 135745 - 135984 356 ## SZO_12840 hypothetical protein 130 43 Op 7 . + CDS 135959 - 137503 1448 ## CDR20291_1792 putative cell surface protein + Term 137541 - 137578 4.5 + Prom 137505 - 137564 5.8 131 44 Op 1 . + CDS 137598 - 139310 865 ## COG0550 Topoisomerase IA + Prom 139312 - 139371 2.8 132 44 Op 2 . + CDS 139392 - 140915 706 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 140941 - 140978 -0.7 133 44 Op 3 . + CDS 140999 - 149716 3665 ## COG4646 DNA methylase 134 44 Op 4 . + CDS 149759 - 150418 662 ## HMPREF0868_1220 single-strand binding family protein 135 44 Op 5 . + CDS 150423 - 150515 83 ## + Term 150564 - 150611 7.9 - Term 150213 - 150247 -0.5 136 45 Op 1 . - CDS 150488 - 151819 556 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 137 45 Op 2 . - CDS 151822 - 152178 249 ## HMPREF0868_1195 hypothetical protein - Prom 152365 - 152424 5.7 + Prom 152382 - 152441 11.2 138 46 Op 1 . + CDS 152499 - 153122 376 ## COG1309 Transcriptional regulator + Prom 153128 - 153187 5.0 139 46 Op 2 35/0.000 + CDS 153216 - 154961 202 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 155135 - 155189 1.8 + Prom 155754 - 155813 8.1 140 46 Op 3 . + CDS 155912 - 156688 211 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 156697 - 156748 2.1 + Prom 156690 - 156749 7.7 141 47 Op 1 . + CDS 156769 - 157350 594 ## CKR_1408 hypothetical protein 142 47 Op 2 34/0.000 + CDS 157350 - 158084 177 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 143 47 Op 3 . + CDS 158087 - 159562 982 ## COG1122 ABC-type cobalt transport system, ATPase component 144 47 Op 4 5/0.000 + CDS 159594 - 160319 304 ## COG0534 Na+-driven multidrug efflux pump 145 47 Op 5 . + CDS 160331 - 160945 364 ## COG0534 Na+-driven multidrug efflux pump + Term 161179 - 161224 5.1 + Prom 160967 - 161026 6.3 146 48 Tu 1 . + CDS 161261 - 161677 460 ## HMPREF0868_1185 sigma-70, region 4 + Term 161690 - 161747 13.2 147 49 Op 1 . + CDS 162060 - 162128 71 ## 148 49 Op 2 . + CDS 162170 - 162367 220 ## EUBREC_0076 hypothetical protein + Prom 162369 - 162428 4.4 149 49 Op 3 . + CDS 162449 - 162625 256 ## gi|290969280|ref|ZP_06560805.1| conserved hypothetical protein + Prom 163553 - 163612 4.6 150 50 Tu 1 . + CDS 163799 - 163906 59 ## gi|290969281|ref|ZP_06560806.1| site-specific recombinase, phage integrase family + Term 164148 - 164191 -0.3 + Prom 164132 - 164191 7.7 151 51 Op 1 . + CDS 164422 - 165687 1520 ## Vpar_1516 hypothetical protein + Prom 165693 - 165752 3.5 152 51 Op 2 . + CDS 165778 - 166245 582 ## Vpar_1515 hypothetical protein + Term 166249 - 166292 9.3 + Prom 166617 - 166676 11.3 153 52 Tu 1 . + CDS 166714 - 170007 2918 ## Acfer_2039 YadA domain protein + Term 170056 - 170092 1.2 + Prom 170189 - 170248 6.0 154 53 Op 1 . + CDS 170281 - 171699 980 ## gi|290969285|ref|ZP_06560810.1| outer membrane autotransporter barrel domain protein 155 53 Op 2 . + CDS 171751 - 173154 976 ## gi|290969286|ref|ZP_06560811.1| outer membrane autotransporter barrel domain protein + Term 173189 - 173237 10.5 + Prom 173183 - 173242 5.7 156 54 Tu 1 . + CDS 173342 - 174775 1674 ## COG2461 Uncharacterized conserved protein + Term 174792 - 174836 9.9 + Prom 174828 - 174887 6.2 157 55 Op 1 2/0.000 + CDS 174910 - 175884 908 ## COG0611 Thiamine monophosphate kinase 158 55 Op 2 12/0.000 + CDS 175895 - 176362 518 ## COG0802 Predicted ATPase or kinase 159 55 Op 3 20/0.000 + CDS 176346 - 177047 164 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 160 55 Op 4 9/0.000 + CDS 177044 - 177505 210 ## PROTEIN SUPPORTED gi|229257752|ref|ZP_04381663.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 161 55 Op 5 . + CDS 177524 - 178549 1273 ## COG0533 Metal-dependent proteases with possible chaperone activity 162 55 Op 6 3/0.000 + CDS 178571 - 180016 1341 ## COG3920 Signal transduction histidine kinase 163 55 Op 7 . + CDS 179991 - 180572 684 ## COG3707 Response regulator with putative antiterminator output domain + Prom 180574 - 180633 2.4 164 56 Op 1 41/0.000 + CDS 180700 - 180981 439 ## COG0234 Co-chaperonin GroES (HSP10) 165 56 Op 2 . + CDS 181020 - 182651 1618 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 182678 - 182719 10.6 + Prom 182718 - 182777 6.9 166 57 Op 1 . + CDS 182817 - 183023 269 ## PROTEIN SUPPORTED gi|227371063|ref|ZP_03854547.1| LSU ribosomal protein L31P + Term 183030 - 183083 9.5 167 57 Op 2 . + CDS 183098 - 183979 829 ## COG3872 Predicted metal-dependent enzyme 168 57 Op 3 32/0.000 + CDS 183997 - 185079 1528 ## COG0216 Protein chain release factor A 169 57 Op 4 10/0.000 + CDS 185072 - 185944 296 ## PROTEIN SUPPORTED gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase 170 57 Op 5 2/0.000 + CDS 185889 - 186980 1226 ## COG0009 Putative translation factor (SUA5) 171 57 Op 6 1/0.000 + CDS 187025 - 187465 671 ## COG0698 Ribose 5-phosphate isomerase RpiB 172 57 Op 7 . + CDS 187481 - 188104 890 ## COG0035 Uracil phosphoribosyltransferase + Term 188136 - 188186 11.1 + Prom 188191 - 188250 4.3 173 58 Tu 1 . + CDS 188273 - 189913 633 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 + Term 189932 - 189972 7.0 + Prom 190053 - 190112 4.1 174 59 Op 1 . + CDS 190151 - 191371 1516 ## COG1171 Threonine dehydratase 175 59 Op 2 . + CDS 191394 - 192800 1700 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 192834 - 192871 7.1 - Term 192965 - 193000 7.4 176 60 Tu 1 . - CDS 193005 - 194567 1514 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 194606 - 194665 6.8 + Prom 194870 - 194929 7.4 177 61 Op 1 . + CDS 194960 - 195436 685 ## COG1846 Transcriptional regulators 178 61 Op 2 27/0.000 + CDS 195423 - 196514 1518 ## COG0845 Membrane-fusion protein 179 61 Op 3 1/0.000 + CDS 196511 - 199558 3298 ## COG0841 Cation/multidrug efflux pump + Term 199575 - 199616 5.2 + Prom 199567 - 199626 5.2 180 61 Op 4 . + CDS 199660 - 201207 1202 ## COG1070 Sugar (pentulose and hexulose) kinases + Prom 201301 - 201360 9.2 181 62 Op 1 7/0.000 + CDS 201451 - 202311 1079 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 182 62 Op 2 . + CDS 202375 - 203157 948 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 203196 - 203246 17.2 - Term 203184 - 203234 16.4 183 63 Tu 1 . - CDS 203269 - 204372 869 ## Vpar_0420 hypothetical protein - Prom 204439 - 204498 3.9 + Prom 204339 - 204398 5.2 184 64 Op 1 . + CDS 204499 - 205014 545 ## Vpar_0265 hypothetical protein 185 64 Op 2 . + CDS 205031 - 205429 350 ## gi|290969317|ref|ZP_06560842.1| hypothetical protein HMPREF0889_0849 186 64 Op 3 4/0.000 + CDS 205448 - 206047 759 ## COG0302 GTP cyclohydrolase I 187 64 Op 4 15/0.000 + CDS 206037 - 206885 888 ## COG0294 Dihydropteroate synthase and related enzymes 188 64 Op 5 17/0.000 + CDS 206885 - 207247 467 ## COG1539 Dihydroneopterin aldolase 189 64 Op 6 . + CDS 207240 - 207743 459 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 190 64 Op 7 40/0.000 + CDS 207728 - 208387 793 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 191 64 Op 8 . + CDS 208485 - 209300 761 ## COG0642 Signal transduction histidine kinase + Term 209310 - 209352 3.4 Predicted protein(s) >gi|290780639|gb|ADGP01000033.1| GENE 1 14 - 1561 1524 515 aa, chain + ## HITS:1 COG:PA1922 KEGG:ns NR:ns ## COG: PA1922 COG4771 # Protein_GI_number: 15597118 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 77 496 251 628 653 87 24.0 5e-17 MPGQGGMPGQGDMPGHGGMQGHGDMHGHGDMHGHGDMPPMRRGHITDGEASNMYGMHRRI HVTAVYDFENKEHNKFRVDLGHMNDDFHAQYPYTTGLEPLRLVYNKDKEEWYHNTQNDIS AEYTGRTAAHDYQIRTYYTTLKKESYLVNRRPLLPKFGPMDFERMLGMMHPKVDVDAADY HTWVVEGKNTRYIGNAHNVTYGGEYKNVFYEGTRLGGSQAGAQKVKKAHAVSSYAGFIED LWQVNEKLLVVPSLRYEHNSRFGSVVTPKIGLTYEATPHIRFKANYGKGYKAPTISELYM NMNHAMGPYVVSIIGNPALQPEHANCYDVSVEGEDGKLFMKATYFTNRVHNLIEGRTVEW YQNQKTHENIMPKRIQYDNIGEARINGTEFMIGAHLTPAWTVKAQYNYLDAEDVGDGSRL SGRPETATTVQVRYDDRRADGIAAVLSGRFIGNYGQAVGRGSIKNYSYHIWDIMMQKKWR SGVTLMFGIDNLANMKNDNLSIGGRAWRLAGQWKL >gi|290780639|gb|ADGP01000033.1| GENE 2 1686 - 3401 201 571 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 348 571 38 268 329 82 27 2e-14 MRKLWACYRSYYTQVLYILLGSCVTAGLDITFPMVVRNILSTVLPAADMARLWRLGGILL GLYAISFVVSWGVYYGGKSMGAAIEHELRSRLFLHLETMDFSFFDNVQTGQLLSRLTNDI SEIGDLLFQLPNLLVVCCITMVGSAGLLFYINGTLAASVLALLGIKTAATIYFNGQLKVT YQETRTITGALSAQAGESLQAVRLVQAFAREATEYGKFVRISRELRRAKQRTFRMGASMM SSVLLFSNLINLVIIAIGAWLILQGRMQIGDLVAFLMYLLVFIKPIFQLTALTEQYQRGL AGYRRYEEMMALTPRITDRRDARRMPAHSGTIRFSHICFSYVAGEPVLQDVSFSVEPGKT VAIVGETGSGKSSLVNLLLRFYEPQHGTIYIDDVPIQDYTLASLRQHIGIVQQDVFLFSG SVRDNIAYGCDGASPEAIERAAVAAEAQAFITALPRGYDSTVGERGVKLSGGQKQRLAIA RVFLKNPPVLILDEATSALDSATERHIQAALQRLTRNRTTLIIAHRLGTIRRADRILVLH KGQIAESGTHEELLAKKGKYYMLYMSQFKKP >gi|290780639|gb|ADGP01000033.1| GENE 3 3843 - 4148 457 101 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1196 NR:ns ## KEGG: Cphy_1196 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 91 1 91 95 119 65.0 3e-26 MSVVIVGGNDCMVCQYKTICKKYSYKAKVFTQVPSDFKSKIGSPDLVVLFTSTVSHSMVR CALKEAQRKNVEVVRSHTSSSNALKCILEARHTCGACAVQA >gi|290780639|gb|ADGP01000033.1| GENE 4 4499 - 5287 1162 262 aa, chain + ## HITS:1 COG:SSO2817_1 KEGG:ns NR:ns ## COG: SSO2817_1 COG2086 # Protein_GI_number: 15899533 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Sulfolobus solfataricus # 1 231 4 234 286 166 41.0 4e-41 MNIVVLVKQVPAISDIRLDADDNNLVRTGAPSMLNPVDRNAVEAALAVKDEQPEATVTLV TMGPATAGDALREGIAVGADRGILISDERMTGSDTVVTARILSKAVEKLGGADLIFTGHR STDGDTGQIPPAMAENLGMALVSYADSVVLQGKVLKATRANHGGIEEVEVPLPAVCSVTE KANAPRQPRIKGKMAAKKAVFDVWRTETLGLTPDEVGVAGSATAVTALFAPEAHAVGKME QGETVPVAVDHLIDDLVAEKLM >gi|290780639|gb|ADGP01000033.1| GENE 5 5300 - 6301 1337 333 aa, chain + ## HITS:1 COG:PAE0721 KEGG:ns NR:ns ## COG: PAE0721 COG2025 # Protein_GI_number: 18312129 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Pyrobaculum aerophilum # 2 332 12 343 346 213 38.0 6e-55 MELKQSIFVYTEVEEGTLTKLSVELLGKARELAQSCSKAVVALVIGEHVREAAGQAIGYG ADAAVVAEGPQFAVFDSILYARAVQQVIAAYTPSVFLLGATKDSRDIGGRVSAALQLGLV ADVTGAEMKDGDDTVTWIRPAYTGKVFAAIRTKTRPQLATVGEGIFLHNASDPSRKGEII TAPLSLDGVTGKRRRTGFTAVAPEKMALSLENAEIIVGAGKGVGDKAGMEQVQAFAERIG AGFGVTKPLVDDGWISHDSQIGITGKKVAPKIYIALGISGALQHKLGIKDAKIIVAVNKD PDAPIFKFAHFGIVGDLFEAMPALEKRIKALQA >gi|290780639|gb|ADGP01000033.1| GENE 6 6488 - 6883 571 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969140|ref|ZP_06560665.1| ## NR: gi|290969140|ref|ZP_06560665.1| hypothetical protein HMPREF0889_0668 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0668 [Megasphaera genomosp. type_1 str. 28L] # 1 131 1 131 131 256 100.0 4e-67 MKCRFCNHDAIYTDGLCRACHEKYHLHDAKIMSQEERDGFCGQTINEDGSVHEEKGRTSY EQTATGPGIHLYSRGLSWRAKLALGFILFCVAAVIIGILGLIVQGIPFLAALLALYILYT ILKAVVRHWRS >gi|290780639|gb|ADGP01000033.1| GENE 7 6895 - 9468 2832 857 aa, chain + ## HITS:1 COG:CAC1098_2 KEGG:ns NR:ns ## COG: CAC1098_2 COG0749 # Protein_GI_number: 15894383 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Clostridium acetobutylicum # 369 857 42 531 531 454 47.0 1e-127 MKEKLVIIDGSSLLYRAFYAIPTLTDSQGRYTNAVYGFLNMLLKLYEELDPHYVAVAFDK DKHTFRHTLYTDYKATRKPAPEELRPQFALIREVLECLGIHVLEKEGYEGDDILGTVARQ SQAAGLEVAVVTGDRDALQLADRAITVYLTKKGITHMQAVTPEVMVREYGYTPAQVIDMK ALMGDTADNIPGVPGVGEKTALKLIQEFGGVDGVYARLSEVKGVKLREKLQQYRESAMLS KQLAAICCDVPLTYTKETFLPQPREEEVRALFQQLGFRQLLTRFAAFARFAPCAPAAAVA PVLREAGTDEIPPTTLVGARVAVAAVYDEQVPVPQIRDMAVAVDGQVVHLSAPHIPAYLE RLPQAAQIITADGKRLYKVLRTGKRPAPFPADVVLGAYLLDPTRTSYALSYLATRFEVPL PEGAAPSVCAEALFAAQVWEKEEAALQQFGLTDLYERIEAPLLYTLSVMETNGFTVDTAR LQAMKTALTAQAAALENEIYEAAGAAFNINSPKQLGHMLFEVLHLPVRKKTKTGYSTDAE VLESLRDAHPAVEKIVRFRALKKLISTYLDGLEPLIVPATGRVYTSFHQTVTATGRLSSS DPNLQNIPIRTEQGKKIRSLFVPGKGYDYILSGDYSQIELRLLAHLSQDPTMIDGFKKNQ DIHRRTASEVFHIPWEQVTPEERSHAKAVNFGIIYGISDFGLARNIGISRAQAKQYIESY FARYSTIHGYMEELVRQAKETGITRTMFGRMRTLTDINSKNFTRRSLAERMAMNTPIQGS AADIIKLAMNAVQRELEQRQLRSRLLVQVHDELVLEVPADELELVKTLLKRTMEEAVTLS VPLIADLHYGKNWEEAK >gi|290780639|gb|ADGP01000033.1| GENE 8 9479 - 10321 1044 280 aa, chain + ## HITS:1 COG:SPy0497 KEGG:ns NR:ns ## COG: SPy0497 COG0266 # Protein_GI_number: 15674603 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Streptococcus pyogenes M1 GAS # 1 274 1 274 275 207 42.0 2e-53 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPNVLKNTTVPGFRNRVVGKRIEGLVRRGKY LQFLLSGEQAVLVHLRMTGKLLYRPALQEEPRARLRLHLQKGLLVYEDVRTFGGFWLVPK TGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQHVVAGLGNIYVDEALF AAHIRPDRQAATISRTEVGKLHAAIGRVLAQGLAHGGTTIRDFVDSNGREGTNQSFLQVY GREGMPCPHCGTRLVYTKVSGRGTRYCPHCQRKRRRTQHV >gi|290780639|gb|ADGP01000033.1| GENE 9 10314 - 10934 754 206 aa, chain + ## HITS:1 COG:SA1511 KEGG:ns NR:ns ## COG: SA1511 COG0237 # Protein_GI_number: 15927266 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Staphylococcus aureus N315 # 4 179 5 179 207 155 44.0 5e-38 MYKIGLTGGIATGKSTVVKMLRTYGAAIIDCDVLAREAVAPGSPGLARVAAVFGNEYVDE TGALRREKLGKAVFAEAAKKQQLEHILFPYIYEAIAVAVRQWEARGAAVAVLDMPLLFEV EYQKYVDEVWLVYVTPAIQLRRLMARNGYDRHTAEARIHAQLPIDDKKKAARVVIDNTGT LAATARQVAAQWRLLQARTAMFGRSV >gi|290780639|gb|ADGP01000033.1| GENE 10 11033 - 11512 555 159 aa, chain + ## HITS:1 COG:CAC1100 KEGG:ns NR:ns ## COG: CAC1100 COG0741 # Protein_GI_number: 15894385 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Clostridium acetobutylicum # 6 158 29 181 183 130 43.0 8e-31 MRQFVYPLQYDYMVRQYAHADGVDPALVAAVILAESKFNETAASHRGARGLMQIMPETGT WIAEKMKWRDFTPAQLADVRTNIRMGTWYLAYLLKVYQGNTVLALAAYNAGRGTVDGWRE TYGWPKDFSKIEEIPFSETREYVKMVLLNEQQYKALYDF >gi|290780639|gb|ADGP01000033.1| GENE 11 11622 - 12347 339 241 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0781 NR:ns ## KEGG: Vpar_0781 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 226 2 231 231 102 28.0 1e-20 MDKTLIETLKQWNITSVLPPSVGAFQLSAEFQTVYREGDEEEFCLFRYRLAAKPWSVRAV YTPSAAEFSVRTDLGMLEFALIDFITDDWERFRHLVATRLVRIMTDYYVHCEHNFTAIVK EKGLPEVRWDSFLPSTYEGFIRYLQPCEAVRIVNGSYMILSYYEAATESGLSLMYNVLRD DFFAEQRVYNFPHSVHDFDSTSVADLQDALQTRLLPVLTRIRREVEEKRAAIRTTKTTDV I >gi|290780639|gb|ADGP01000033.1| GENE 12 12348 - 12884 458 178 aa, chain + ## HITS:1 COG:lin1358 KEGG:ns NR:ns ## COG: lin1358 COG0779 # Protein_GI_number: 16800426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 32 156 6 127 155 116 47.0 2e-26 MAAIAGIGEWGVPTLIFYTVYGRCKMGQMKREQIETWVTEKAEQLLASTSLELVDVEYVR EKDWYLRVFIDKEGGVDLEDCQQVSEKLSKVLDREDPIRDNYLLEVSSPGLDRILKKDKD FLRYAGRTVDIHFFAPREGKKDWVGELVKKDGPCLVGAYKRHGNAAGLYTNRASSVAY >gi|290780639|gb|ADGP01000033.1| GENE 13 12906 - 14024 773 372 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 350 9 355 537 302 44 9e-81 MNKELLNAIAFLSKEKGVSPDVICDSLEAVLITAYKKEPEANPMADVELNRETGDYRIVA AKTVVAEVTNENEEIVLAEARKQNAAYEIGDMVKVDVTPHNFGRIAAQAAKQVMIQRLRE AERSIVYDEFYNRTDDIITGLVQRIENKIVYVDLGKAEAVLPVSEQIAEEQYYVGQRLKC YVVEVRKTTKGAQILVSRTHPGLLKRLFELEVPEIYDGVVELKSVAREPGRRSKIAVFSR DTNVDCVGACVGPKGVRVQNIVTELQNEKIDIVKWDEDPAVYIANALSPAQVVSVTIDEE NKMSAVIVPDYQLSLAIGKAGQNARLAAKLTNWKIDIKSESQAKDGNSKDNEGEPDILSE LSVPVSPAGDTE >gi|290780639|gb|ADGP01000033.1| GENE 14 14100 - 14294 213 64 aa, chain + ## HITS:1 COG:CAC1800 KEGG:ns NR:ns ## COG: CAC1800 COG2740 # Protein_GI_number: 15895076 # Func_class: K Transcription # Function: Predicted nucleic-acid-binding protein implicated in transcription termination # Organism: Clostridium acetobutylicum # 1 61 23 83 88 64 49.0 5e-11 MIRVVRTPEGEVVIDDTGRKAGRGVYLCRRLSCLEKAYKEHRLERSLKTDVAAEIYEKLR HALL >gi|290780639|gb|ADGP01000033.1| GENE 15 14291 - 14605 176 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90961547|ref|YP_535463.1| 50S ribosomal protein L7AE [Lactobacillus salivarius UCC118] # 1 98 1 97 101 72 40 1e-11 MTVREKILNLLGIAYRARKVLCGDFAVSAYMQKSKVPLLFLASDSGKDNREKYRHWCAQK NITIIDIYTKEELGRAAGNKYHVVIGVTDAGLARAMRKERQAMV >gi|290780639|gb|ADGP01000033.1| GENE 16 14619 - 17045 2924 808 aa, chain + ## HITS:1 COG:BH2413 KEGG:ns NR:ns ## COG: BH2413 COG0532 # Protein_GI_number: 15614976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Bacillus halodurans # 4 805 5 727 730 678 51.0 0 MSKRVYEAAKDYNVPVKKVLDVLKQHNIKATNFSGVDAHMEAILTKNFSPTGQVKKKAGK IETEGTGHHVKASQHKQETVQPIKKKPHTGTMSAKAASGDGKPGSPQRSGEQKHREQHNG ANRQQGKQQAETAQRKQAETASPQGKQGEGKRTKFFGHSRGEGAQKNDGRKKRGQGGNQN GKNNRNGNARPHTLLSNVLGKGKHKNRHASKNAHPVEGNAPATKKKTYPTEVSVPETIIV KEFAERLGREVGEVIKKLLLGGIMATINQEIDFDTAALIADEFGVTVTPEEAPADPTEIE EIVDAPETLKVRPPVVTIMGHVDHGKTSLLDAIRQTNVTSHEAGGITQHIGAYQVSYNGK KIVFMDTPGHEAFTAMRARGAQVTDIAVLVVAADDGVMPQTVESINHAKSAGVPIIVAIN KIDKEGANPEYVMQQLTEYGLVGEAWGGDTIMVPVSAHKKIGLDELLENILVLAEVSELK ANPDRPAQGVVIEAKLDKGRGPVASVLVQKGTLHVGDTIIVGPCFGKVRAMTNERGERMK KAAPSIPVEILGLNDVPEAGDILDVTDEKTARSVAEKRLEKKRSSALRANAKVTLDDLFS QIQQGELKELPIIIKGDVQGSVEALRQSLLSIKSEEVRIAIVHAGVGAISESDIMLASAS NALVIGFNVRPDAAARKAAEHENVDMRMYRVIYDAINDVEAAIKGMLEKKYEEKVIGRAE VRKVISTPKVIVGGSYVKEGKLTKTAKVRLIRNGIVVYEGEIDSLRRFKDDVKEVAEGYE CGVTLDKYRDIKEGDEIEAYEMVEIAPE >gi|290780639|gb|ADGP01000033.1| GENE 17 17060 - 17407 587 115 aa, chain + ## HITS:1 COG:lin1364 KEGG:ns NR:ns ## COG: lin1364 COG0858 # Protein_GI_number: 16800432 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Listeria innocua # 4 115 3 114 114 100 43.0 8e-22 MGEVRVRKIQEFIKQEVSAMLLREIKDPRVGFVTVTDAKITGDLREATVYVSLYGSPEEK RATLQVLRQSAGYFRTAVGKRLGIRYAPSITFAEDTSLDYGMKIDRLLRDVEKKE >gi|290780639|gb|ADGP01000033.1| GENE 18 17411 - 18355 1003 314 aa, chain + ## HITS:1 COG:aq_1630 KEGG:ns NR:ns ## COG: aq_1630 COG0618 # Protein_GI_number: 15606737 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Aquifex aeolicus # 18 314 19 318 325 141 30.0 2e-33 MQIHPQDIKKILQTYDHILLTAHVSPDGDAVGSVLALYGCLCQWGKHPVLVIDDEIEEKY KYLPAAAQIRKPQEVQTDASWLTVILDATDTARIGRTAALIKGKVLNIDHHISNRHFADW EYVLPAYAAAGEVLTELFLQWSVSITPEMADALYTAIATDCGFFKFGNTTAHTLRMAAAA VAAGARPARISESLEARDFADLTVLSEVLRHIERFADGRMAGIVFTPELLALTGDHTGSY IDYARIIKGVDVAFTVRYVTATETRLSLRSKHTDVNAIAAVFGGGGHIRAAGATVSGSLQ ETKEKLIKEIINAL >gi|290780639|gb|ADGP01000033.1| GENE 19 18352 - 19230 836 292 aa, chain + ## HITS:1 COG:SP1212 KEGG:ns NR:ns ## COG: SP1212 COG0130 # Protein_GI_number: 15901075 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Streptococcus pneumoniae TIGR4 # 2 289 1 291 292 191 40.0 1e-48 MMRGIVNVIKPTGMTSHDVVGCLRHLYGIKKVGHAGTLDPLAAGVLPVYLGNATRLIEYG DSDRKTYHGEFILGLATDTEDITGTVIETRPLPPLTFADVAAVLPAFSGTIRQRPSVYSA ITIGGVKAYTLARKQVPVVMPERQVTIHAIRLLAYEGGRGLLAVTCSKGTYIRSLIRDIG EALGTCACMSYLVRVRAGMFHIEDAVTLEALATAPEHYVLPADRAIGHLPPVYLSAAQCR DLRCGRAVPVPETRAVEETVLRAYGEDRQLIGIVHFDKKHHRLRPHKMFMEE >gi|290780639|gb|ADGP01000033.1| GENE 20 19244 - 20206 388 320 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 18 309 20 315 317 154 34 4e-36 MEVFHSFQEITGCHAAVVALGTFDGVHMGHRAVMRAAMAEAKKLHRKAAVVTFSAHPLSV LHPEKEPLRLATTAQKIQYIADVGVDVLVLLPMTKELMAETPTAFCRQLQETFCPAAIVV GENFTYGAGAGGNTETLAAYMKKHRTPVQVLPLVPDPQGLEPISSTKIRQLIACGNVEEA GRLLGRPFAMTGTVADGDRRGRTIGFPTANLHLAPHMAVPADGVYITEVSRQGQWLPAMT NVGANPTFTRQYRRVETHILDWHEDIYGQDITVSFLRRIREEKQFPTVAALITQMQQDKE VVRQYFLTRQALQDLETVSL >gi|290780639|gb|ADGP01000033.1| GENE 21 20288 - 25570 4944 1760 aa, chain - ## HITS:1 COG:PA1922 KEGG:ns NR:ns ## COG: PA1922 COG4771 # Protein_GI_number: 15597118 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 1 282 90 364 653 67 26.0 3e-10 MGNVGVSIRGAEPRHTLILVDGQEALGGLAKYSGAGDELQRIGTENVDHIEIIQGAASAK YGSGAMGGVINVITTKPTKKAGLKFNVEGRRDRDTAQSTPGTNAYLRADSGKIGKISFAL YGNKRDLLPIYSNRIRREVLATQEEADANAYEKNSLRFYGTNANAGISAHYDIDANHTLD TRADHYQESLERFIKRTTSYLEPQVHYKRDLKRNTGNIAYTGKNDTSDWKVEFNYTRTKE TDITLTSDYGKSTYEGKNTLDAVDEVNHGEWKGEFTMNRQVNDKHLLSYGFGYAHEDGEG SRVKMAPETYLRSINPYDYDKSLYVHHGEASSKIHKYNLKTDKNGALIWNKESEYYGYHG EKQPPYDERYKPEMTDKEERNMGVPDNWGDPIGNAAETKQMLAQNPDRYKAYSFVDTTKP WGYDTERKFLPQFTYEEWKQYLDPSFAGKGSSSHLTLTGGDGTNTDKERRSLFSRNPDAY YRYKAFNETLKNLETARQAYNQYIINTNYKDKIIYEIIDNIPKKRIYTKEQQYEDHVRKY IKEHNAFPEDYKPTMKDYGTTYGNAKDLTDNYGTNDLKDYYALLYYGTTWNFPSAFMKTN GKIFREEYNQNQNKQLVGKAALNKAHVFLQDTWQLNENTMLYPIIRLDHTNLFGNNVSFT MGVTHTLGGNVHRRFKANVGTSYTAPGLGELYYCWEMFGPHVLKANPDGSGTARLGWYWQ GNPDLKPEKGFNVDISIEGENAKTYTKLTLFHNKIDNYLTLYNTGKLIDFNPEADESTIL GIFKYFHAPDRIYSFKNIGRAEITGAELEIKHQFNASLKGRIGYTWLHAVNLDDPTMPRQ LLDKPQHKINIGLDYENKKTGWSGSIWGEYYIHMLDSNSVAGNKNTLTTERIKNPKQTGD SLFDKAKLHYDILDKKTVDMYQRKTYGMWNIMIQKKINKDSLVYFGIDNLFNHRDDDRAF SARTFRFGANFKLGLSAKQKLEDFIPKELKGKISPLLLAGFLDRPFDAGQTTAIRVFGDY RARMDSHLGENRPAVRVTESSSIDDGAVKALQNKADHGFSQRIRLGLHAKVAAHTHLTLV GSAAAVKETDTAQTAVDNRSINKVRIEKADITRHTAAWDVSLGRLNEKMGITGYWFNQSF DGARLLYTDKNSQFRVGFGDFSHSTGVTDSAYTHAEYDVFYRTPTVNELMGVHYEGGQLK LTESKETYGNKLNYYRQLANIRDAEASSLNQLKAEKQQAEDSANEWYKKYSERADKIGLN NAGKDPECIDYDAKMNKELAKAEELKTKIEQAEKELYPHDLSTRLEVLQRLQSLAKKTYS KELHTKKYFIETPELTASYTHKTHDEDTNQDYNDMENFTVPGYAKPNNTAPEDVAMRKKY EVSLDETRMLTDGKAYLQEWYQAHKTQLLTYYNSKIKELAESKAADNNHTNITIKQLTEK DLDDMHYVDKLYEENFTKTASYNSLFDGEHSSVIANYFKGIQAALTEGDGNSPLPREAFE KEIGRPILTKGNLLRRDTIDPINRAIFFQYRRKATNRLGLTAWFFRSVGNQEQQYKIADY DLKGYDKMGHKIVDNRNDTHVFRKAVNVFAIGAKYQVTSLSSISFDFGINRSELGRYLNG NTKSEQYIDPSISDPNSSVYTSRFLMNGRTLGKNPKFFDIRFDFGRHDYRLPGSWSAFGD YKYFEHGAFFGGNGTEGLPDRYLDGVKSFTLGGAYVPRKNMLLEAYYTFDAQSTGKRDTL YGPEQFKLGNYTRLQLTYKF >gi|290780639|gb|ADGP01000033.1| GENE 22 25588 - 25836 223 82 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1342 NR:ns ## KEGG: Vpar_1342 # Name: not_defined # Def: TonB-dependent receptor plug # Organism: V.parvula # Pathway: not_defined # 6 69 5 69 1692 62 57.0 5e-09 MNLLKGNTSRYAFLLSCAVLTWLTAPPAVHAATVSTKDVYVKATAAEEEAKFESQQKTII TKKDIEKNRPNRRKILSFRKPA >gi|290780639|gb|ADGP01000033.1| GENE 23 26142 - 26294 69 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969157|ref|ZP_06560682.1| ## NR: gi|290969157|ref|ZP_06560682.1| hypothetical protein HMPREF0889_0686 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0686 [Megasphaera genomosp. type_1 str. 28L] # 1 50 1 50 50 93 100.0 5e-18 MRLTEVELPQGTWLSIADRLGKVSGSVGIFLSFYLFGRDRNARIAFEIRV >gi|290780639|gb|ADGP01000033.1| GENE 24 26263 - 27438 1154 391 aa, chain + ## HITS:1 COG:CAC2445 KEGG:ns NR:ns ## COG: CAC2445 COG0138 # Protein_GI_number: 15895710 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Clostridium acetobutylicum # 3 391 5 391 391 487 59.0 1e-137 MQELPLKYGCNPHQAAARVYRKDGGELPFVVRNGNPGYINLLDAFNSFQLVRELATVTGQ PAAASFKHVSPAGAAVATAMSDTLKKIYYVEDLPLTPLATAYACARGADRLSSYGDFAAL SACCDAATAKLLQREVSDGVIAPDYTEEALAILKTKKGGRYCILQMDPTYVPAPVESKDV FGITFAQERNTVALTPSVLTRIPTRQKEIPAAAQRDLLIALITLKYTQSNSVCYVKDGMT IGVGAGQQSRIHCTRLAGHKADVWWLRQHPQVLALPFRADLRRPERDNAIDVYVSDEQEE VRADGVWQRLFTTRPPVLSAADKKAWIQQLQGVSLGSDAFFPFGDNIERAHRSGVAYIAQ TGGSVRDDHVIAACDRYGIAMAMTGIRLFHH >gi|290780639|gb|ADGP01000033.1| GENE 25 27630 - 28181 499 183 aa, chain - ## HITS:1 COG:CAC2749 KEGG:ns NR:ns ## COG: CAC2749 COG0622 # Protein_GI_number: 15896006 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Clostridium acetobutylicum # 1 172 1 180 180 156 43.0 2e-38 MKLLIASDIHGSAYYCRLLLTRLQEERPDTLLLLGDLLYHGPRNDLPREYAPKEVIRMLN DCPVRKLCVRGNCEAEVDQMVLNFAVLADYAFFYTGDRQIFLTHGHRYNLRRLPPSLHPG DLLLHGHTHVPAWQAFGNRNYYLNPGSVSLPKEESPHSFMTFDGHTFVWLDITDGQPYHT LCL >gi|290780639|gb|ADGP01000033.1| GENE 26 28271 - 28789 517 172 aa, chain - ## HITS:1 COG:no KEGG:Cthe_2458 NR:ns ## KEGG: Cthe_2458 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 1 117 1 113 154 84 38.0 1e-15 MQEEEYKKVNIDKKIAWYASRSTRNRLYYIGLKRTERMLSALLPLLTFTASYLQFINVYS NLCSAVMSSIVTLIASVHGLSEVHENWRDYSQTAEALRREKRCYQMHASIYAHADNPSAC LQARVNALIAPTYPQTAGAHPLAVSLATCWNHLQHSSHAKLAHLENYRKFIP >gi|290780639|gb|ADGP01000033.1| GENE 27 29010 - 29681 891 223 aa, chain + ## HITS:1 COG:PA0065 KEGG:ns NR:ns ## COG: PA0065 COG0546 # Protein_GI_number: 15595263 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Pseudomonas aeruginosa # 5 212 11 218 221 166 44.0 4e-41 MSTQVIFDLDGTLTDSREGIIRSVAYALTKEGETTAGRLAAETIIGPPLWETFCGTYGFS EAKARRVYAFFQERYSTIGKYENKPFAQVPEMLATLTRAGLAVYVATSKPEVHARDICEH FHLLPYIREIAGPQVGGTDTKADCIRRILRSIGPQAHRTAVMVGDRRFDVEGARSNRIPV IAAAYGYGSEEERRAYPPDRTVDSVAALTQVLLQWQDKEKREI >gi|290780639|gb|ADGP01000033.1| GENE 28 29681 - 32602 3107 973 aa, chain + ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 10 973 11 976 976 770 41.0 0 MADIVGKQIHGFRVQRAETVREIGGKAYELRHEQSGARVLYIQTEDDNKVFSISFRTTPK DSTGVPHICEHSTLCGSRKFPLKEPFVELVKGSLNTFLNAMTFPDKTMYPVASRNDRDFK NLMDVYLDAVFFPAMLKDRQVLMQEGWHYEMADEDSPMSYSGVVYNEMKGVFSSPDAQLE RHVMSLLFPQTTYGVESGGDPDVIPTLTFEDFTAFYRTYYHPSNSYIFLYGNMDMEATLA FIDEEYLRHFTYTSTDSAIARQTCPGSIVKTFPYGVASDEKTAGKTLHSLTYVVDDAADP TLGLAFKVLTYVLVTSPAAVLKKALSDAGVGKDITADFQDGLLQPLWSLSINGSEPSAQA KILPIVRQTLTDLVHNGIDRQALEGALNRVEFTLREADFAGRPKGLIYGIRCMDTWLYDK DPLAALRYEESLRILRQGLQTKYYEDILQTYLLQNPYYALVSLVPERGGTEQHDRKQAET LAAYKKTLSAAEIKDIVASTKALKKRQETPDTAAALATIPVLSRRDLAPQAEAVEMHKET VAGVTVVRVPDRTNGITYIDAYFDLHGITAAELPYVYLLSDVLGDMDTRRRTYAELASQI DLYTGGLDVSVAAFSDYQDATAYTPVFKVKVKSLNGNVAQTAALLQEITTASVFTKWERL IELVEELKAGWDMDAFRRGHTLVMHRLLSYVSPVEAFSDGGEFSYYRFLTKLAATIRERA DEVAKTLQTLLEKIMTKAALTVAVTGEGAAYEATAQALSSWFGALPQGRRQTALCRFTLQ RKNEGIMTGGKVQYVAKGGNFRQHGFAYTGALAVLDTILQYGYLWTKIRVQGGAYGAMTR FCGNGDMVLCSYRDPNLRSSIEAYDALPDYLATFDVSDREMTKYVIGTLSRIDIPLTPSL RGAKAMSRYFTGLTAETEQRRRDQVLQATVQDIRDLAPLLRAVMADNNLCVMGSEGIIRR EKELFTSLLPLTE >gi|290780639|gb|ADGP01000033.1| GENE 29 32616 - 33566 949 316 aa, chain + ## HITS:1 COG:aq_1221 KEGG:ns NR:ns ## COG: aq_1221 COG0008 # Protein_GI_number: 15606455 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Aquifex aeolicus # 1 298 4 292 473 186 36.0 4e-47 MRGRFAPGPTGYLHLGNVWTALLSWLQVRQQGGTWVLRLEDVDEQRSRAVFARSILRDIT WLGLTWDEGPRIGGPYAPYIQQQRYGLYMRALQLLQRQGLLYPCYCNRARLQTLGAPHAG ERHVYDGCCYKRFKKNMAPPGDKSPSRRVHVPPDTLVFADLQYGRQETALRRDGGDFVVR RADGLFTYALAAVVDDGAMAITHVVRGRDLLPVTAQQIWLLQVLGYDVPQYLHVPLLVDA GAHRLSKRQHGITVAALRDAGADPCQILSYLAWRGGLVREKRRYTLAELVQQSELSRLSG EDICVAAPEREICSLL >gi|290780639|gb|ADGP01000033.1| GENE 30 33727 - 34167 531 146 aa, chain + ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 138 1 138 143 140 50.0 1e-33 MFMGEFTHSIDAKGRVILPAKFREELGLHCVVTRGLEGCLSVYTAENWLSLANSMKKLKA SKENVRAFKRFLFGSAAEVEFDRQGRILIPAALREYAKLTKDVTVLGTGDKIEIWDKGAY ETYAAAIVPDMEEIAESLHETLDVDF >gi|290780639|gb|ADGP01000033.1| GENE 31 34176 - 35108 1125 310 aa, chain + ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 309 1 309 312 335 53.0 4e-92 MDFHHVSVLREETVAAVLGPKNGIYVDCTLGGGGHAATLAAQLQEEALVIGLDRDRDALR AAAARLQGVPCRTRLVQRNFQYLADVLQELHLPYVDGIMFDLGVSGYQLDTPERGFSYMQ DGPLDMRMDQRCAVPASTVVNTYSEEALYSLIKAYGEERWAKRIAAFIVRARRQKPFSRT AELVYVIKQAIPAGARRDGPHPAKRTFQALRIEVNNELGILHDALTTAVQHLKPGGKIGV ITFHSLEDRITKQTFKELATDCICPPDLPVCTCHHRASIRVRRQVVTPSPQEVADNPRAR SAKLRVAERK >gi|290780639|gb|ADGP01000033.1| GENE 32 35148 - 35531 491 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969166|ref|ZP_06560691.1| ## NR: gi|290969166|ref|ZP_06560691.1| putative cell division protein FtsL [Megasphaera genomosp. type_1 str. 28L] putative cell division protein FtsL [Megasphaera genomosp. type_1 str. 28L] # 1 127 1 127 127 238 100.0 1e-61 MLARNPEYTGYHVGKPSFAATELRAAESCFTGKGKLIVKLIGLVTLFLLAYVGLSAVKTA QSYELANAKLQAKQLQQENDNLRIDIARLDAPERIYTMATAQLGMVAPSRVLYGTPDTAV GRTTDNQ >gi|290780639|gb|ADGP01000033.1| GENE 33 35630 - 37129 1808 499 aa, chain + ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 19 487 17 472 482 400 43.0 1e-111 MKTIEELCGQVSATHEVRGDARVQVRGITADSRDVQPGDLFVCVAGAHVDGKTFAAQAAA KGAVAVLTTEPLPLPDGTVQIIVPDIHAAVEEMVPFFYDYPGKKMRMIGVTGTNGKTTTT HIIAHILRTAGYHVGVLGTIHALMDDLELPIHNTTPDVVELQRFLAQMYARGITHVVMEV SSHALALQRVAGIEYDTAVFTNLTQDHLDFHKTMENYAAAKAKLFRGLTAGTPVKKGKTA VLNRDDPWSVLMRKACGTAEVLTYGTEREASLRGTHLQVALKHSAFDVTGPFGDMHLQMN ITGLFNVYNTLAAIGAAYAEGVDPETIGKAMQTFHAVPGRFELVEAGQDFAIVVDYSHTP DSLEKALTTARAMNPHKIIVVFGCGGDRDRTKRPIMGRIAATHADIPVVTSDNPRSENPE AIVAEVAAGVKEALQPGQQYEVLTDRRRAIRRAVALANTGDMVLIAGKGHETYQILKDKT IHFDDREEARNAVAALKRE >gi|290780639|gb|ADGP01000033.1| GENE 34 37132 - 38508 1445 458 aa, chain + ## HITS:1 COG:slr1351 KEGG:ns NR:ns ## COG: slr1351 COG0770 # Protein_GI_number: 16330763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Synechocystis # 31 453 33 444 454 259 40.0 7e-69 MATFTVKEVEQATGARLLAPVTGGNRTFLQVYTDTRSLQKGGLFVALKGERFDGHDFVLQ AVAKGAAGVVVAAREETFAALPVPVFAVPDTLRAYQALARFHRRRFALPVIAVTGSVGKT STRQMIASVLSQKLRVWQTEKNFNNEIGLPKTLLGLTAEHEACVVEMGMRGPGQIAELAA IAEPTIGVVTNVGKSHIELLGSQENIAKAKGELPAALPATGTAVLNQDDWRVAAMAKLCR GKVIGYGTSVGAAVRAGEIQTDDKGLSFICRCFDQTFRATVPVLGKHHVYNALAAVATAR LLGLSETQMCKGLAAYAGVPMREELVHVGPYTFINDAYNANPASMEEAVQTLAAVKKEQK IAVLGGMLELGDWTVREHELLGKKIAAASITALITLGTPASYIAEAAEKAGMKAVYQVSD HQAGAAVLRDLLEPGAVVLLKGSRGFTMEKILTYFEGM >gi|290780639|gb|ADGP01000033.1| GENE 35 38514 - 39491 1194 325 aa, chain + ## HITS:1 COG:BS_mraY KEGG:ns NR:ns ## COG: BS_mraY COG0472 # Protein_GI_number: 16078583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 1 322 6 323 324 271 51.0 2e-72 MVYTLWWGFFISLAVSLAAGKPLIGALKKFRARQSERPEGPAGHKSKEGTPTMGGLLILG AVVLAMALCRVLFGEGDWRQGSVLFLFLGHGAIGFLDDRIKAVKKRNLGLTALQKIVCQI IMAVIFCFLLHTVLHVPTTLWIPGTTLHVNLGYAYYVVVFLMLVGTGNAVNLTDGLDGLA AGSCAITFAAYGVIAIALGYIHFSLLSAVLTGACLGFLFFNQHPARMFMGDTGSLALGGA LAGMAILTKTELLLLLIGALYVIETLSVILQVLSFKTRGVRIFKMSPIHHHFELSGWSEV KVVTVFWIFSAIMAVLSIFVVWSCR >gi|290780639|gb|ADGP01000033.1| GENE 36 39520 - 40884 1512 454 aa, chain + ## HITS:1 COG:BS_murD KEGG:ns NR:ns ## COG: BS_murD COG0771 # Protein_GI_number: 16078584 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Bacillus subtilis # 12 447 13 443 451 263 35.0 6e-70 MSIMDFSGKRAVVIGGGISGRSAAMALVKHGGTVVLADTQPRDVTQTPFAELRAAGVEFL FGAQDSGLLDGADIIVPSPAISPEIPLLQEAVRRRIPVWSEVEVACRVTDAAILAVTGTN GKTTTTTLLGEMVKASGRQTAVGGNIGVGLAQAVTDLPPQAVAVAELSSFQLELTSSLHA VGAVILNITPDHLDRHHTMEAYSAAKERIFSNQEATDTAVLNYDDDRVRNMQARRKGKVV FFSTQGEVPEGTFYKDHQLMLRHDGTDTLICRDSDLQLFGAHNIQNCLAAVLLATAVAIP LPVIRSVLKRFRGVEHRLEKVRVLQGVPYYNDSKGTNVDASIKALEAFSGHLILIAGGHD KMTPLDAFMKLAARKVDTLILVGESADRFAAAAKKAGVRDIRNVGYNMEKAVMTARKLAR PPQQVVLSPACSSFDMYDNYEQRGRVFKGIVNAI >gi|290780639|gb|ADGP01000033.1| GENE 37 40916 - 42052 1309 378 aa, chain + ## HITS:1 COG:BH2565 KEGG:ns NR:ns ## COG: BH2565 COG0707 # Protein_GI_number: 15615128 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus halodurans # 3 368 2 362 363 274 42.0 2e-73 MRRVIISGGGTGGHIYPALTIARAIAAMEETEFLYVGSRRGLENTLIPKENIPFVTLDVR GLERKISVRNLLTLGKTVAGLVAAKKIIRKFNPHVVIGTGGFVCGPVLLAACLSGIPTLI QEQNVIPGVTNTILSHFVSRIALGYEAAATRFHTKSKLVYTGNPVRREVLTVTKEEGRRI LGLDARRFTLVAAGGSRGARSINTAMIMVHEYFKNMDDIQIIHVTGEDEYARVAAALPGI DADGRYGRGSRIVPYLYTMPAALAAADLAVYRAGAVGLAELTVRGVPAILIPYPYAAEDH QRYNAQNLVMHGAAKMILDKMLNGKELLEEIVRLKEDKAALAAMAAAGRALGKPQAAHDI AQLALTLAYGGKQYGECN >gi|290780639|gb|ADGP01000033.1| GENE 38 42055 - 43443 1686 462 aa, chain + ## HITS:1 COG:aq_1360 KEGG:ns NR:ns ## COG: aq_1360 COG0773 # Protein_GI_number: 15606557 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Aquifex aeolicus # 7 461 6 454 454 345 42.0 2e-94 MVDLNTVKKIHFIGIGGAGMRAIANIFIEKGYIVSGSDSKQTEITERFARQGARICIGQR PENLADAETVIVSTAIHPDNAEWQAARERHLPILHRSDALVHIMSWGKAIAVAGAHGKTT TSSMLGQVFIEGRLHPTIVIGGEVDYLHSNSTLGTGPYVIAEADESDGTFLKEHPAIAVV TNIDADHMDHYGSMAHVIAAFKQFIQRLDPQDGMAVLCFDNEHIRRLASQVGRTYISYGF AEDAEYTAKNLYYKEGKHYFDVYRRQVLLGTVCLQVPGRHNVLNALATIAVSLHCGLPFA EIAAALCRFHGAKRRFQTKGYVGTIRVVDDYAHHPTEIKATLAAAGDMGTHRVVCLFQPH RYSRTQLLLEQFGTAFSNADILVVTDIYGADEDPVPGVTGRLIVDKIKEKTGKSAVYIPR KEDILPFLQKEARPHDLILTMGAGDIYRIGEAYITMAKGERM >gi|290780639|gb|ADGP01000033.1| GENE 39 43443 - 44384 1043 313 aa, chain + ## HITS:1 COG:STM0130 KEGG:ns NR:ns ## COG: STM0130 COG1181 # Protein_GI_number: 16763520 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Salmonella typhimurium LT2 # 9 308 4 305 306 206 40.0 4e-53 MSKNAEQMRIAVMVGGPSTEAAISRKTGAAVAAALQEKGYKPEIMELVPTMLARTLQEKK IDVVFNALHGRYGEDGVLQGFCEMAGIPYTGPGVMASAVGMNKVMSKCAFAGAGIPTAPF AYYFAAQSPAAIVAAIEREFSLPVVIKSAGQGSSIGTVIVREADALPEAVKEAFSYSNSI IAEQFIDGDEFTVAVMDDMAFPVIQIVSDTGKYDYYSKYTPGVAKHLCPAPLTETATRQM QDLALQVFHLCHASGVARVDMMTDAAGRPFVLEINTVPGMTETSLVPDAARAMGMSFADL CEKILQEACTGKF >gi|290780639|gb|ADGP01000033.1| GENE 40 44412 - 45302 652 296 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1110 NR:ns ## KEGG: Vpar_1110 # Name: not_defined # Def: polypeptide-transport-associated domain protein FtsQ-type # Organism: V.parvula # Pathway: not_defined # 90 295 49 254 293 153 38.0 8e-36 MTRKLRDGQERYQNNHMYGTSGQRPEVFIPPTVPTVPENTAIPGPRRPGVRRRPPRRGSG SWRRRRFGSRRVWAIVLLIFIIWGILRIAPVPFGKVTIQGNSQLTTADVYRAAGVGAPIN VIQLSPSQMEKRLHEDLRIGTVSVSRRFPATIVVQLSERRPIAVVMTMFGFAYVDPTGMI MASGAQIKGTSVPIITGKKVDTVLLGDTLTDASVQGALQYLHELPASVQGRITEVNVANP QDIIAYTGDGTAIHLGNGDAPQERAKITGELLRQAGEQRIAVQYVDTDPSAPIIKN >gi|290780639|gb|ADGP01000033.1| GENE 41 45426 - 46451 1441 341 aa, chain + ## HITS:1 COG:BH2558 KEGG:ns NR:ns ## COG: BH2558 COG0206 # Protein_GI_number: 15615121 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Bacillus halodurans # 1 308 8 315 382 358 70.0 9e-99 MAEFANIKVIGVGGGGNNAVNRMIESGLQGVQFISVNTEDQVLEVSGADVKIQIGEKLTR GLGAGANPQVGEQAALESKEEIIKALQGADMVFVTAGMGGGTGTGAAPVVAECAKELGAL TVAVVTKPFAFEGKRRKEQAEKGAAYLKEKVDTIITIPNDKLLQIIDKKTPLKDAFLVAD DVLRQGVQGISDLITTTGLINLDFADVKTIMSDQGEAIMGIGIASGENRAVEAVDSAIHS ALLETSIDGAQSILINVTGGPDISLYEVNEAAEKVAEAVDPDANIIFGSVIDPDMEDSIR ITVVATGFGKEPSSIPSFGQKGGKTGTAQGSTNVEIPTWMR >gi|290780639|gb|ADGP01000033.1| GENE 42 46520 - 46993 433 157 aa, chain + ## HITS:1 COG:CAC1698 KEGG:ns NR:ns ## COG: CAC1698 COG1327 # Protein_GI_number: 15894975 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Clostridium acetobutylicum # 1 151 1 151 151 161 52.0 5e-40 MICPFCKSNENKVTDSRTTDDGRAIRRRRECQHCRRRFTTYEMLEEAPIVVIKRTGDREL FDRNKIITGLLRACNKRKVTRRQLEEVVTTVERRIRNLLLTEVTSEKIGEIVLNELRSLD EVAYIRFASVYRQFADLDSFMAELKHLMENKSFTDKK >gi|290780639|gb|ADGP01000033.1| GENE 43 47011 - 48495 1587 494 aa, chain + ## HITS:1 COG:HP0858 KEGG:ns NR:ns ## COG: HP0858 COG2870 # Protein_GI_number: 15645477 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Helicobacter pylori 26695 # 18 484 3 455 461 353 41.0 5e-97 MTGSYIDNFLNHQLRRLRIAVMGDVMLDRYVFGTVERISPEAPVPVNKVTRTRAVPGGAA NVAANLAGLECRVYLAGLIGDDENGRVFRTLVQKAHIDDRGLWQRPHHAMTTKMRILGDR QQMIRLDFERTVTITAAEEAFFLQWLQQRIADGLDGLILSDYAKGVLSPRLTQSLIKMAK AAHIVVLADPKGTNWEKYNGADFVTPNVKETGICLGTAVANTQEAVYRAAKAIHERYEFA HLLITRSEKGLTVVRRDGKCWYSPATAQEVFDVSGAGDTAAASFMAAIGAKLSIRAGLQL ANTAAGIVVSKVGTHPVGREDLLQLWRQRQGRRWHTYHTRSWQAVAKKIRQWQEVGETVV FTNGCFDLLHRGHIRYLQQAAGQGDHLVVGLNADSSVRRLKGDRRPLVSEEDRAILLHAL SCVEEVVIFSEDTPEQLLAVLRPDILVKGGDYTPEEVAGRSYVKEVKIMPFCEGYSTSAL VAKICTVYGVKTGE >gi|290780639|gb|ADGP01000033.1| GENE 44 48568 - 49098 405 176 aa, chain + ## HITS:1 COG:CC3616 KEGG:ns NR:ns ## COG: CC3616 COG0241 # Protein_GI_number: 16127846 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Caulobacter vibrioides # 5 170 31 197 202 145 43.0 3e-35 MQYSVKAAFLDRDGVLNKDTGYVGSIADFQWQEGAKEALRILTEWEYTIIIVTNQSGVAR GYYTEEAVRRLHHWLSVEAVRCGSRITAVYYCPYLPGAPIKAYDYDSDWRKPNPGMVLQA CKDYAVERSRSFLIGDSPRDIECGKRARVDSYLFTGGSLADFVRNILKERKQSGRL >gi|290780639|gb|ADGP01000033.1| GENE 45 49085 - 50116 920 343 aa, chain + ## HITS:1 COG:VC0225 KEGG:ns NR:ns ## COG: VC0225 COG0859 # Protein_GI_number: 15640255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Vibrio cholerae # 6 337 12 346 357 104 25.0 2e-22 MEDYKNILVIRMSSLGDIIHTLPTLYALRKNWPQARIVWAVHPQFKPVLPGKPYIDEIVC VEERRLLYPPYWYTLRKRLHSYHFDLSLDLQGWAKSAVVALCSGATRRVGYGELAEGSRL VSTMLTGPHCHGNLVERYLDTVRALGGTTDTVAFPLPELGAATQATAAVMQQDGIGETYV VAVPGARWALKEWPLPQWRELLRRITAQGMPVVLLGSKADGPKGEYLRREVPSPYLRDYI GKTTILEMMAIIRGASLFISADTGPLHAANALQRPLIALFGTTGAARSAPYHGGDKQHIQ VLISPTARADARHPKIKDPDCMRQITVDRVWEAYEQSRRKFRF >gi|290780639|gb|ADGP01000033.1| GENE 46 50202 - 50786 776 194 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1106 NR:ns ## KEGG: Vpar_1106 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 194 2 189 189 76 28.0 5e-13 MKKKCIMSTIMACLVLGAPAMAAPLQQPQPGDLKVNINYGLQQKEGNHAANHHFAGGDVT YVLSPKWGIQYQNNYVRGNTGNRVSEHVLTGDYYINEQLTAFAGGTYVQAEKAGVSKNSY GYQWGVKGQMQLPFHLQGYARIGVGNKINSYTVGVGYEVLPGIDAHLQYRRSRIRTAGYD DSVHGVQVGMGYKF >gi|290780639|gb|ADGP01000033.1| GENE 47 50931 - 52088 940 385 aa, chain + ## HITS:1 COG:BS_yrvO KEGG:ns NR:ns ## COG: BS_yrvO COG1104 # Protein_GI_number: 16079805 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Bacillus subtilis # 1 341 1 339 346 299 43.0 8e-81 MERVYLDYAAATPLDSRVLAAMMPYLTTRYGNPSSLHYWGQQARAAVQRSREKIATSLAV PSTRMVFTGGGTEADNLAILGYLRANFPHGGHLVTTAVEHHAVLRTFAFLATQGYEVTQV PVQADGRVAADAVAAALRQDTVLVSVMAVNNETGACQPVEAIAALTRERHIAFHVDAVQS YGYRAWHPADTGIDLLTICSHKIYGPKGVGALYIGPGIQVAPDTYGGPQEHRLRAGTENV AAIVGFGKAAELLEQERPARICRVTALRTLLYESLLSSPDLRDIRYNGSRHHTAPHIINI SLAGADSAVLLIALDRLGIAVSAGSACEAGAVRPSHVLQAMGVPDKWLRGSLRISLGKET TADDIRRFVAALQKVATGIYKGERL >gi|290780639|gb|ADGP01000033.1| GENE 48 52085 - 53173 1102 362 aa, chain + ## HITS:1 COG:CAC2233 KEGG:ns NR:ns ## COG: CAC2233 COG0482 # Protein_GI_number: 15895501 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Clostridium acetobutylicum # 1 361 1 354 355 322 45.0 8e-88 MKQCVAVAMSGGVDSSVTAGLLQRRGLDVIGITLRLWEAPPTCEVTENIHACCSLSAVED AKAVADVLGIPHYTLDFRDVFSQDVITYFIQAYKDGKTPNPCIACNKWIKFGLLWQRAQQ FGADFLATGHYARIVYDARRKVYSLLRGADRRKDQSYVLYQLQQDLLPHILFPMAELTKT ETRRLAKEWHLPVFNKPESQDICFIPDNDYKKFLRSRAPQHFIPGNFVDKEGRVLGTHAG IPCYTVGQRRGLHLGGPGGPYYVTALDVPHNRVIVGGAADLFRTAVEVQEVTWVEETPET DFSALGKIRYAAKEAPCRVHVSDGARMRVEFVTPQRAVTAGQALVLYDAATGERVLGGGI IV >gi|290780639|gb|ADGP01000033.1| GENE 49 53190 - 54992 2071 600 aa, chain + ## HITS:1 COG:BH1342 KEGG:ns NR:ns ## COG: BH1342 COG0481 # Protein_GI_number: 15613905 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Bacillus halodurans # 6 599 13 606 609 831 67.0 0 MATKYIRNFSIIAHIDHGKSTLADRLLERTGTVSQREMEEQVLDTMDLERERGITIKAQS ARLVYDAKDGHQYTLNLIDTPGHVDFNYEVSRSLAACEGALLIVDATQGVEAQTLANVYL ALEHDLEIIPIINKIDLPSADPERVRREIEDVIGLDAENAILVSAKTGQGIDDVLEAIVR YIPAPEEAPQKPLRALIFDSHFDAYKGAIANIRIMEGTLRAGQKIRMMATGKEFEVIETG VFLPQMHKVAALECGSVGYLAAGMKNVRDCRVGDTVTTATHSAQTPLPGYRKAVPMVYCG LYPLETNEYDALRDALEKLHLNDAALLFEPETSTALGFGFRCGFLGLLHMDVIRERLERE YGLSLITTAPSVNYHVYCTDGTMVTVDNPSLMPDMSKIERIEEPLVKTSIIVPKDMVGTV MEISQNRRGQYVTMDYLDETRVSLVYNLPLCEILYDYFDTLKSATRGYASVDYALNGYQV SPMVKMDILINGETVDALSVIVHREFAARRGRALVEKLRGLIPRQLFQIPIQAAVGNKII ARENVAALRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKQFGTVEIPQEAFMAVLKVEES >gi|290780639|gb|ADGP01000033.1| GENE 50 54989 - 56107 956 372 aa, chain + ## HITS:1 COG:L0193 KEGG:ns NR:ns ## COG: L0193 COG0635 # Protein_GI_number: 15673121 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Lactococcus lactis # 5 371 9 373 379 259 35.0 6e-69 MIGIYIHIPFCTGKCRYCDFPSYSGVSSYYEAYVEAVCRELSAYTGDTRADTVYFGGGTP SVLPTALLEKLLHTVQQVFSLAPATEITAEANPESLRREQCEKWAALGINRVSLGVQTFH DALLQSLGRLHTAAQAYEALQAVAAAGITNISLDLMYGLPGQTLQAFKEDIQTLSRLPVT HVSIYRLTVEEHTPLWHSVQAGKERVANAAEVEAMQQYLYGTMRQMGFEHYEISAYAKPG YRARHNCKYWRYEPYIGFGAAAHSFDGQTRRCNVRSLPQYIRSCTTSGRIQEETRIAAAR AMEDYCFLALRMRDGIDYDDFFQRFQVSFGSQFGRTERRLYEQGLLQRTEKGCALTPLGL AYGNYVFSRFLR >gi|290780639|gb|ADGP01000033.1| GENE 51 56484 - 56897 473 137 aa, chain + ## HITS:1 COG:no KEGG:Teth514_1169 NR:ns ## KEGG: Teth514_1169 # Name: not_defined # Def: thioesterase superfamily protein # Organism: Thermoanaerobacter_X514 # Pathway: not_defined # 46 130 53 137 139 70 35.0 3e-11 MKVNLDIINGKIKKNPFASFLHFQAVQATGDSVTLVFHNRGTTWNNPNQTMYGGILYAMA DSAMSLACEAAGKPVVTLDLAMNYLAPAWADTCIRAVATLIHQGRTTMVGLCDFYDDRDR YLAHGRGTFFVTDKNEV >gi|290780639|gb|ADGP01000033.1| GENE 52 56911 - 57336 585 141 aa, chain + ## HITS:1 COG:no KEGG:Teth514_1169 NR:ns ## KEGG: Teth514_1169 # Name: not_defined # Def: thioesterase superfamily protein # Organism: Thermoanaerobacter_X514 # Pathway: not_defined # 8 136 10 137 139 83 34.0 3e-15 MGRISEQERIFLRLREELQYKSPYYQQLPFEVVRLTRGQAVLRFTIAPHFVNAAGKASGG VLAAFCDSLMGITGRTLGDQVTTLEINMNYICPVPAGSVLVGIGTVIHEGAKTIVVECEF LNEHKEIVVKGRSSFYILQKF >gi|290780639|gb|ADGP01000033.1| GENE 53 57369 - 58511 1385 380 aa, chain + ## HITS:1 COG:BS_acdA KEGG:ns NR:ns ## COG: BS_acdA COG1960 # Protein_GI_number: 16080770 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Bacillus subtilis # 2 375 1 374 379 350 51.0 2e-96 MMNFSYTEEQQELIRVVRELVAKEIAPYAAEMDETEKFHDGLMEKLAAQGLFSVVIPEEY GGAGLDALTIAALYEEIGKGCAGVATTVAANALASYPVIIAGTEAQKKKYFDVLAEGNLA AFALTEPGTGSDAGSVSTRAVKTEDGKGYVLNGTKCFITNGALAEMFVVFANTRKTGGIR GLTAFIVRKGTPGFTVGKAENKMGIRSSNTTELIFQDCFVPAEDRLGREGQGFRIAMNTL DAARPLVGAVSVGIAEAAFRACSEYAKVRVQFGKPIASFEMVQSMIADMAIEIEAARMMV QKACWMKDQGLDFSRQAAMSKCYASDVAMRVTTNAVQVMGGYGYIKEYPVEKYMRDAKIM QIYEGTNQIQRLVIANKSLY >gi|290780639|gb|ADGP01000033.1| GENE 54 58777 - 59802 1231 341 aa, chain + ## HITS:1 COG:BH3111 KEGG:ns NR:ns ## COG: BH3111 COG0016 # Protein_GI_number: 15615673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Bacillus halodurans # 2 341 1 341 344 395 53.0 1e-110 MIQETIGAMQQAVQERLLHCRTAQDVQAVRVQYLGKKGELTALLKGMKNVPPAERPAFGQ LVNAARSALEAKLQERQAEVEEQEMATRLQSETLDITLPSRQPVRGHMHPLHLTRRHMEE AFLRMGFSLVEGPEIETDYFNFQCLNFPPDHPARDMQDSMYLTDSLLLRTHTSPMQARVL QSHKPNEPVKVIVPGKVYRWDYDATHSPVFHQMEGLIVDRHIRFSDLKGMLEDFLREIFG ASTKVRFRASYFPFTEPSAEVDISCVMCGGEGCRVCSHTGWLEILGCGMVHPNVLRLNGY DPEQVTGFAFGMGVERIAMLKYGIDDLRLFYENDMRFLTQF >gi|290780639|gb|ADGP01000033.1| GENE 55 59818 - 62250 2419 810 aa, chain + ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 144 808 1 654 654 448 36.0 1e-125 MKSSLQWMKEYVRTDYITDPQAFADRLTIAGIPVEAVETWGNEVKKVISGKILQIEKHPD ADKLTVCQVDMGEETLQIVTGAKNIAVGNIVPVAVHGAHLPGGVKIKKSKLRGVPSFGMF CSAKEFGFDDSVLQPEEREGIWILPDTTPIGTDLVSYLGLEDVVYTYELTPNRADCFSMV GLSREFAVLGKACARYPEISVHEGEAEAARMIRAAIEEPALCSRYAVRVLTDVQVGPSPL WMQMRLRKSGVRPVNNIVDVTNYVMLELGLPLHAYDYDKIHGHSLYVRRARAGETLKTLD EVTRKLTPSMLVIADADAPVCLAGIMGGADAEVTARTKTVVLECASFKGSDIRHTGRALG LRSEASARFERGVDAACCRQALDRCAQWLQQMSACETAKGIVDVYPQPEPVRKISFTAAQ INDFLGTSMPPEEMTDLLRTLQFDPVRQGETIVVTVPSYRGDCAEMADIAEEVARIYGYE RIPSTRPWSRVSEGTESREHAVREKISQILSDCGLQETVTFSFMNEKSLHRLQFPAGDDV YRAVPILNPITEEYPLLRTTLLPSLLDVLVRNQAVKNDRAALYEIAAVYQPKALPLTEQP SENIRIAGLLYGKRLAPAWNRSEATYDFYDVKGVVEAVLQGLGIAATLQPSHFAPLHPGR AAAYVKDGQVLCRFGELHPRAAEQYDVAGPVYLFDFDFAAILPFVQDLPAYSKPARFPAM SRDLAFLAPESVTNRQITDVIQQYGGSYLERVSLFDLYQGAPVPQGYKSLAYSLVFRSPE GTLADADIQEALDAIIATLKVQLNCQLRES >gi|290780639|gb|ADGP01000033.1| GENE 56 62531 - 63856 1883 441 aa, chain + ## HITS:1 COG:BS_tig KEGG:ns NR:ns ## COG: BS_tig COG0544 # Protein_GI_number: 16079875 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus subtilis # 1 401 1 401 424 278 42.0 2e-74 MNVTVNEVDRHKVTLHIEIPVKDASKMAVTACKNLAGKVNIPGFRKGKAPRMVLESFLGK DAVKQEIEEAIMNKAYPEALKEQKIDPVTDPEIQVVTADKGKDFVFEATLTKKPEVTLGE YKGIQVGKDIVNITDEDIDKEVKNLQKQHAKLLVAPEGTAIENEDFAIIDFQGSIDGKPF AGGEGKAYPLEIGSHSFIPGFEEQLIGLKAGEEKDVKVTFPEDYHEAGLAGKEAVFAVKI NDVKRRELPEINDEFAKEVGKFENVEELRNDVKKRIFTKVSLQAVETFNNEVLKTVMANA TVDIPQVMVDDKVNQMVDEMAMKLQAQGMNLDAYLKYTKMDVAKLKEQYAAPAKENVKMD LVLEAVAKAEDIQVTEQDVNAEIYTMAQNFGADPKEVYKIILKEHRVPLLIQSVGRKKAA SFILSKAIDTNEKKEEVKPEA >gi|290780639|gb|ADGP01000033.1| GENE 57 63875 - 64477 886 200 aa, chain + ## HITS:1 COG:ECs0491 KEGG:ns NR:ns ## COG: ECs0491 COG0740 # Protein_GI_number: 15829745 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 5 191 17 203 207 286 72.0 1e-77 MSMYVPVVVEQTSQGERSYDLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLEAEDPDKD IYLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLAAGTKGKRFALPHSQ VMIHQPLGGVQGQATDIEIHTREILRVRRELNGILAAHTGQPLDVIEKDTERDNFLTAED AKHYGLIDEILVRPQQENRK >gi|290780639|gb|ADGP01000033.1| GENE 58 64489 - 65721 270 410 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 159 379 255 432 466 108 36 2e-22 MADRKDEPKCSFCGRTQDEVKKLIAGPGVFICDECISVAAHIIEDEEMESGEQFSLETLP TPHEIKATLDEYVIGQEAAKKTLAVAVYNHYKRLQSNTDADDVELQKSNVVMVGPTGSGK TLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENCLLKLIQAADYDIEKAQRGIIYIDE IDKISRKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQGGRKHPHQDMLQIDTTNILF ICGGAFDGIDKTIQKRISDKKMGFGADVQSKSKKALKTLLKDIIPVDLQKFGLIPELIGR LPVLVTLDPLDEEAMVHILTEPKNALVKQYQKMLKMDDVELKFTSDALQEIAKEALRRNT GARGLRSIIERIMLDVMFDVPSRKDVEKCIVNKSCVTEGKKPRLELKQGV >gi|290780639|gb|ADGP01000033.1| GENE 59 65795 - 68110 3059 771 aa, chain + ## HITS:1 COG:BH3050 KEGG:ns NR:ns ## COG: BH3050 COG0466 # Protein_GI_number: 15615612 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Bacillus halodurans # 9 768 9 770 774 769 52.0 0 MDEKDILKLPFIPLRGIVVFPDLLSHADLGRKKSLAALDAAMEGNRYIIVSSQLDPDLEE AGVDDVYEIGTLVKVDQLLRLPGGLVRVMLDGAARVRIQGFSEKEKYVEVAAVKVYDSHT DEKTEEALRRANVEKFVQWANNLRNSDELETRAREIQVPGTLADFIAMRLPISHVARQQI LETANVTERLEEVRHLIDSEIEIAKLEMSLNREVREKMDKQQKEYYLREKIKVIHRELGD KIDRDTEVEELRAKVKKMKLPKKIEEPVLKEISRLEGMPSMMAETAIVRTYLDWVLALPW KKETRDRLDLAEARKVLDTDHYGLDKVKERIIEYLAVKQLTNSLKGPILCLVGPPGTGKT SIARSIAKAMNRKYIRVSLGGVRDEADIRGHRRTYIGALPGRIIAGIKQAGVKNPVFLLD EVDKLASDLRGDPAAALLEVLDPEQNNTFVDHFLDLPFDLSKVFWITTANVITDIPYALR DRMEIIEFSSYTEEEKVAIAQKYLVPKQIAENGLKSTQAKFSPAVLHHIISGYTREAGVR SLEKTIGAVCRKVGKSILLQEKPQLTVSVKNLETMLGPVRFLPEEAHKQDCIGRVTGMAW TQVGGVILETEAVAVKGKGRLLLTGKLGDVMKESAQAGVTYIRSRAETLGIDEEFYTTRD LHIHLPEGAIPKDGPSAGITMATALASALSGKPVRHDVAMTGEITLRGDVLPVGGIKEKV IAAHNAGIKKILLPHDNKRDMKDVPETVKKDVTFVFVRSMDEVLAEALVKV >gi|290780639|gb|ADGP01000033.1| GENE 60 68112 - 68732 692 206 aa, chain + ## HITS:1 COG:CAC2636 KEGG:ns NR:ns ## COG: CAC2636 COG0218 # Protein_GI_number: 15895894 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 8 205 5 193 200 155 40.0 5e-38 MAALDVIQAKYVATAVKKSQYPTDGLAEVAFLGRSNVGKSSLINSLCNHRGLARVSGSPG KTQTINYYGVTLRQEDGEDVRRYPLYFVDLPGYGFAKTGKKQRDMWSAFIHEYIRESTQL RLLCLLIDSRHPGLDLDLQAYEWLLSAGVSVQIVATKSDKLRARERQQNLRTLAELFPDG GRPLLYSSLKRQGQTLLLQQIIHTIA >gi|290780639|gb|ADGP01000033.1| GENE 61 69209 - 71614 2626 801 aa, chain + ## HITS:1 COG:STM4114 KEGG:ns NR:ns ## COG: STM4114 COG1882 # Protein_GI_number: 16767379 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Salmonella typhimurium LT2 # 9 801 1 765 765 588 39.0 1e-167 MKDTDFKELSPRVQALKEEILSAKPCIEAERAVIVTESFKETEDKPMILRKALALKKILE EIPIAIRDRELIIGTMTKNPRSAQVFPEFSNQWLVNEFDEIGKRKSDSYMISEETKKTLL SCFSYWRGKTVNELATGYLEPETRDAMNANTFTVGNYWFNGLGHYVVDYEKVLIKGIRGL REEVEQQMATASKADPSYMEHMKFWEALLITFDGAVTYARRYSALAKELAEKEKNPERRA ELENLAEICAKVPEYPAETFYEAMQSFWIIQLVISLESNGHAISPGRFDQYMYPFYKKDA AEGKISHEFAQELINCLWVKFNDLSKIRDYVTTLAFSGYGMFQNLIVGGQTRDGRDAAND VTFMCIDATGEVKLPQPSFSARVWTGATQKYLRHTARLTRLGLGFPAFYNDEVIIASLVS RGIALEDARDYAIVGCVEPQAVAKTDGWFDAAFFNLARVLEITLHNGKADGKQIGPVTGD LEDFKNIEEIIAAYKKQIAYFVNQMVLADNCVDLAHRKRAPLPFVSSLMDDCIAVGKSIQ EGGAHYRSSGPLGVGVANVGDAFMAIKELVFDKKMLSLRDLKKALETDFGKQCDDEFSKK KYEKIRLMLINRAPKYGNDIDEVDYYTREGAQIYCKEVEKYTNLRGGKFLPALYPVSNNV HLGDQVGATPDGRYSHSPIADGVSPSRGMDVKGPTAAASSVAKLDHMIATSGTLYNQKFS PQALKGDSGLDHLISLITAFFAKKGMHIQFNVVDKDTLLKAQQHPEEYRDLIVRVAGYSA QFIILDKDVQNDIIARTEQEF >gi|290780639|gb|ADGP01000033.1| GENE 62 71640 - 72566 837 308 aa, chain + ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 10 307 6 300 302 235 36.0 8e-62 MWETDSKKTGKVFNIQRFSLNDGPGLRVIVFLKGCPLSCKWCSNPESQSYQTEILYNSKN CIDCHDCQTSCSHQAIDVRRPYKLLREHCTACTDCVQTCFANALTVIGEDMTVAQVMEKL EKEDTMFRYSGGGVTLSGGEPLTQADFAMEIFKACKANGWNTAIETTGYASEESIRKCIP YIDLVLMDFKQIDSAVHKKFTGVENERIKKNARLISSLAKEMIARVPVIPTFNADRESIY EIGKFVKTLPNIKEIHLLPYHRFGLGKYKLMGWEYGLSDEIKTPDEAYMKELKEMVTSLG LTCNIGAI >gi|290780639|gb|ADGP01000033.1| GENE 63 72749 - 74077 1459 442 aa, chain + ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 4 432 3 436 450 376 42.0 1e-104 MKSLNEEAYKKFADTYEAQPEHTCIESAISNVGLVEASKNKRVIQAHSFIFSQEIDHKNI TDQKQSGRCWLFAALNMARPAIMRELHLEAFELSQSYLYFFDNMEKTNVFLDKIIQTKHL DINSREVVRALTFKTEDGGYFEYFKALIEKYGIVPKTVMGESFHTENSQDMFARVEEIIK KYAMDIRRSEDDGQIETLKEECLCKVYGIFVKCIGKPVEQFDFEYKDKDNKYHIERNMTP RTFYKKYVAHTYENKIRLIHDPRARHPYGRVFVNPDIKNIVEMDGLKGLNVPTEVMKTAM IRSLQDGQSAWFACDVGKMSDRKTGIMDTRLFTYEETVAPVGTFTKADRLDSRQSVATHA MNITGVNVKDGKPVYWKVENSWGDKNGHKGIFSMTDAWFDAYVYELIIDKKYVDSRYLQG FEQEPVPYSPYDAFCTILNYIK >gi|290780639|gb|ADGP01000033.1| GENE 64 74300 - 75340 1215 346 aa, chain + ## HITS:1 COG:all0087 KEGG:ns NR:ns ## COG: all0087 COG1077 # Protein_GI_number: 17227583 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Nostoc sp. PCC 7120 # 11 340 12 345 347 246 43.0 6e-65 MAGYFSPLTKNIGIDLGTCSTRVFVEGRGIVLAEPSVLAMDERTGEPLAFGQAAEKLLAT AEEHVKLHRPLHNGVIADYNVTYKMLGYLLSKCVRSVQRLRIMVGVPAGASNVEKRAVME AMYQAGAKEAFVMETGAAAAVGAQLSVAEPAGNMVMDLGGGTTNIAILSLRGIVLSQSLH IGSLSFNQAIREYLQERYAIGADEMTIEEMKISCGAAVLPLEDKNFYFMGRSLANGLQQE ASIRASELYAVMGRTLQKILLAARRILQETPPELAADIMDRGIYLTGGGARLTGAATLIS QELGVPVRVADNPESAVVCGVGKVIAERNRWEALTEGADRIYKRRF >gi|290780639|gb|ADGP01000033.1| GENE 65 75343 - 76263 1034 306 aa, chain + ## HITS:1 COG:CAC1243 KEGG:ns NR:ns ## COG: CAC1243 COG1792 # Protein_GI_number: 15894526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Clostridium acetobutylicum # 52 277 62 280 283 118 28.0 2e-26 MFSFGKRSLLGVLILFILLAVMGWAWRQRESLPVITRTLQAAVTPAESVSSGILQSFSNV FHIVDVSMKNRIEWEALEKENAALKNRSVNYDELAAENERLRALLDFRNTHPQYKLVAAA VISRDYGTWTETMIIHVGTRNGIAKNMPVITPQGVVGFVADVFPDTARVQLLTDPRTSIG AIVQRPASRVASVVRGNGNVPTEPQFVNVAKDADILEGDTLVTSGFGSIYPKGLPVGTIV SIHQDATDFVKYAVIRPAVDFSKLEEVFVVAAAVPTEPYSTPDVQPKLVPQTNRDKVEGV KGAAAL >gi|290780639|gb|ADGP01000033.1| GENE 66 76260 - 76772 658 170 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1225 NR:ns ## KEGG: Vpar_1225 # Name: not_defined # Def: rod shape-determining protein MreD # Organism: V.parvula # Pathway: not_defined # 8 144 8 144 164 70 29.0 2e-11 MSIKRCLLFAVVLFFLQSTLIPFLFDGVTQPNVFFLAVILIALQYGRKAGIVTAVVAGFV QDVVLSNFFGLHLIPYVILAAISSYIGRAGDKEQRILTVVTVLGATEVSLLLYCLMAFVS GQYVQPAAYMAEFAMPMTVYHLVLVLPAEYVVGKLRRQDSYYGYRRYYRP >gi|290780639|gb|ADGP01000033.1| GENE 67 76790 - 78622 2155 610 aa, chain + ## HITS:1 COG:XF1312 KEGG:ns NR:ns ## COG: XF1312 COG0768 # Protein_GI_number: 15837913 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Xylella fastidiosa 9a5c # 14 591 26 615 694 330 32.0 6e-90 MLQALMKKKRNEGRFRHLFWIFIAVFLLLISRLVYLQLIEGDYYHSLAEGNRLRAIPIAA MRGVMYDRNGQILVGSRPGFIVTYVPTKKGMPAAEVNELADLLQTTPDALREKLGKVKSS YLPTVLATDLTQDIVTRIEERRNELPGISIDVQPIRYYPYNDMAAQIFGYVGQIDEADMK RLAGRDGVSTVTQIGRAGMEAYYDDLLRGKDGGRQVEVDAAGSPVKEMERKNPVSGHNMH LTLDLNLQLAAEKAMDAQLANGIGAHGIAVVAMDPNTGAILAMASRPSYNPNWFTRGITA AEWRQINTNPYHPMENRAITGQYPPGSTFKLITGSAALELKKVRPDEMIYDSGRHWLIDK RNAGGEALGWIDFKTALAKSDNVYFYEMGRRIGIDQMAAYARMFGLGQKTGIALYGESDG VVASAEYKKKVFHQDWYLGDTFNSAIGQGFQLVTPLQAAMVVSEVANGGIRYRPFLVSRI DNLDGTPYQIFAPEQIGSLAISKSTLDLIREGMRNVAEENGTAGYLFANFPIPVAGKTGT AENYGGRDHGWFVAYAPYAHPRIVIAVLTEQGGFGSASSGPIVKTMLEEYFHVGAYAPGA QQNARTDRNN >gi|290780639|gb|ADGP01000033.1| GENE 68 78637 - 79614 951 325 aa, chain + ## HITS:1 COG:aq_877 KEGG:ns NR:ns ## COG: aq_877 COG2894 # Protein_GI_number: 15606217 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Aquifex aeolicus # 1 219 1 224 262 127 33.0 2e-29 MATIIALASGKGGVGKTLLTAALSLALHRQGKKVLAADADMGLRNLDLMFGMQDEVLWDG GDSIKQRCRFREAVLEVLPGLDFLPASQRHTWEKLDAPAFQYGIEKLARAYDYVVVDCPP GRGYAYKAATAIADRLLLVVAPTRTSVRDVSRMIQYCRKHKQTHYAVLLNNFLGHTDPAY LSAAAVLQALDSPPLAGILPHREEIHAAAQQGTLVQVKENPFFTSLQYTVTYIQTQKSVD PQTVWDSWRTAGTERSSLPTAPGEVSIPEKALRSLQEAAAVAAQWQSPTAAVEMDEAAGK PAEAAGKISWQQRRDRSYAWRRYRR >gi|290780639|gb|ADGP01000033.1| GENE 69 79625 - 80725 1306 366 aa, chain + ## HITS:1 COG:FN1027 KEGG:ns NR:ns ## COG: FN1027 COG0772 # Protein_GI_number: 19704362 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 18 361 22 363 366 234 44.0 2e-61 MFKREWKNIDRVLLGTCILITIVSLCIIGSATHINKGVMNYGFAAKQAGAFVIDLAVLLT FCRYDYRKLKKYSKPLYIINLLMLAAVLFLGKSALGAQRWIQLGPITLQPSEFSKLIMII CMAAMISERVHALQTMRQILPIALFVGIPFLLVLKQPDLGTSLVFLGIAFGMLFIAEIKL SLLRNMFAAAVVAAPIGWHFLKAYQKERIAVFLNPNADPLGAGYHIIQSKIAIGSGLLFG KGLFNGTQSQLNFLPENHTDFIFSVIGEELGFLGCAGILFLYFLLIYRGLMIAKDCKDPF GMLLATGIVSMWVFQLLVNIGMTCGIMPVTGIPLPFMSYGVSALTTNMMALGILLSVYLR QQTMIF >gi|290780639|gb|ADGP01000033.1| GENE 70 80778 - 82211 1540 477 aa, chain + ## HITS:1 COG:XF1125 KEGG:ns NR:ns ## COG: XF1125 COG1530 # Protein_GI_number: 15837727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Xylella fastidiosa 9a5c # 4 474 5 495 497 298 36.0 1e-80 MKTVIADVMPEETRLAVLEDGKLRDYAVERDDESHIVNHIYAGTIQNILPALQAAFVNIG RKKNAFIYMGDLFPRAATKEEIQQTRISVGQHILVQVVKEEQGGKGAKVTANISLPGRYA VLMPTVDYVGVSKKIRQEEERDRLRRIVGHVKPPGMGVIIRTVAEGVTEEALQADITYLL HTWDSIRQRYKLAKKNQLLYREADLVMRTVRDHVTADIEKIIVNHPDTYERIRQVFPDPT WQEKLIYYTGKEPVFEAYHIEDEVRHLWSRQVALPSGGNLIFDYTEALTVIDVNSSKYTG NSTLQETIFHVNKEAAKEIARQLRLRDIGGIILVDFIDMARAEDREAILAILSRETASDT RKTRVMGMTALNLVEITRKKSRQSLFQVQYTPCTVCGGTGYLYAAESVALQIMRRLRQLV RERRLRGDVLIVAHASVLAVMREKKQVARWERELARSLHFEESVHANREVFSILSYE >gi|290780639|gb|ADGP01000033.1| GENE 71 82411 - 83373 1021 320 aa, chain + ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 3 313 2 312 318 233 37.0 3e-61 MKIKKRIVGVVGVGHVGAHVAFNLGMMGIADEVRICDVKEQKVISEVQDLNDAVSYMPNH VIYVASDYAGLKDCDVIVNASGDISLLTKGNTRDLELANSVKQVADFVPKIMAGGFQGIF VNITNPCDVISNLIAETSGLPRQRVVGTGTLLDSSRLIHSISAQTGLDARGFTAFMLGEH GNAQFVAWSCVSFYGKPLADFSGDATFRFDKEDLQRRAIDGGWVTFRGKQCTEYGIASAG ATLVRTILHDEKRIIPVSAPLRGEYGQQDIYCGVPAVIGADGVERVIEYKLPPEEAAEFA RCCDTIRANIAKGNEILHKK >gi|290780639|gb|ADGP01000033.1| GENE 72 83458 - 83787 358 109 aa, chain - ## HITS:1 COG:lin1894 KEGG:ns NR:ns ## COG: lin1894 COG0708 # Protein_GI_number: 16800960 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Listeria innocua # 1 101 147 247 251 150 65.0 4e-37 MAHEEIDLKNPKSNRKNAGFSDAEREKMTALLAAGFTDTWRHFYPQTADVYSWWSYRFNA RKNNAGWRIDYFITSQDLTNRLQNAFIYTDIMGSDHCPVGLTWDCPSEQ >gi|290780639|gb|ADGP01000033.1| GENE 73 83790 - 84224 452 144 aa, chain - ## HITS:1 COG:FN0047 KEGG:ns NR:ns ## COG: FN0047 COG0708 # Protein_GI_number: 19703399 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Fusobacterium nucleatum # 1 137 1 137 253 201 64.0 4e-52 MNCISWNVNGLRAVMKKGFMDVFTALDADFFCLQETKLQAGQIEMNLPGYYQYWNYADRK GYSGTAIFTKHRPLAVTYGLGIDRHDHEGRLITLEYPTYYLITCYTPNSQNELARLPYRL TWEDDCRNYLVSLKEKKALFSAAT >gi|290780639|gb|ADGP01000033.1| GENE 74 84436 - 84708 404 90 aa, chain + ## HITS:1 COG:CAC0478 KEGG:ns NR:ns ## COG: CAC0478 COG3830 # Protein_GI_number: 15893769 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Clostridium acetobutylicum # 1 89 1 89 89 77 50.0 4e-15 MEAVITVVGVDRTGIIATVSQVMAEHKINILTINQVILDGLFNMVMIADLQESCISFAEL QDILRHKGEGLGVQIMVQNRAIFDSMHRVG >gi|290780639|gb|ADGP01000033.1| GENE 75 84721 - 86079 1924 452 aa, chain + ## HITS:1 COG:CAC0479 KEGG:ns NR:ns ## COG: CAC0479 COG2848 # Protein_GI_number: 15893770 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 452 1 451 451 579 66.0 1e-165 MLNIQEVLETNRMIRKNNLDVRTITMGISLLDCAAVDGKTLCRKIYDKITSYGEHLVETG EAIADEYGVPIIHKRVAVTPVSLIAGACALENYVDIARTLDRAARTIGINFIGGFSALVE RGMTRGEERLLSSLAESLATTELVCASVGVGSTKAGINMDAVARMGHIIKDLSLLTKDRD ALGCAKLVVFSNAVEDNPFMAGAFHGVTQGDCCISVGVSGPGVVKQALAAVKGAPFDVVA ETIKKTAFKITRVGQLVAMEASRRLQQPFGIIDLSLAPTPAIGDSVADILEEMGLESCGA CGTTAALALLNDAVKKGGLMASSRVGGLSGAFIPVSEDKGMLEAVGRGSLTLEKLEAMTC VCSVGLDMIALPGDTAAETIAGIIADEAAIGMINNKTTAVRVIPVPGKKVGDRVEFGGLL GHCPIIRVNPFTSAAFIARGGRIPAPLRSLTN >gi|290780639|gb|ADGP01000033.1| GENE 76 86116 - 87159 1167 347 aa, chain + ## HITS:1 COG:BS_tagO KEGG:ns NR:ns ## COG: BS_tagO COG0472 # Protein_GI_number: 16080606 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 2 308 6 313 358 237 44.0 2e-62 MLIRYIVPFIIALVAAYLLTPAVKTLALRVGAVDRPNARKVHTHIVPRLGGLAIYIGFMA AVLICLPLRHELIGLLLGCTAIVALGIWDDICNIPAKVKLIGQIIAACIPIAFGIQIDWL TNPFGTLWVLPEIIAVPVTVFWITGFTNTVNLIDGLDGLAAGVSFIASISMFLMACSMGQ EVPALLIAAMAGAALGFLQYNFNPAKIFMGDTGSMLLGYTLSVAAVFGLVKTAATVALVV PVIALGLPILDTVFAIVRRRMSGVPVFQPDKGHLHHRLLALGLSQKQAVLIMYCVSVALG IVALFVASVGYKTGIFTVIMVLAVSIYSAKRIGILRKTTTTNTTHTK >gi|290780639|gb|ADGP01000033.1| GENE 77 87197 - 88351 1266 384 aa, chain + ## HITS:1 COG:BS_yvyH KEGG:ns NR:ns ## COG: BS_yvyH COG0381 # Protein_GI_number: 16080619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Bacillus subtilis # 2 380 4 377 380 438 59.0 1e-122 MIKVMTIFGTRPEAIKMAPVIGELRRHTNDIRTVVAVTAQHRQMLDQVLSLFHIVPDYDL DIMSQGQTLYDITTKALLGLQPVLAEEKPDLVLVHGDTTTTFAGALAAYYQRIPVGHVEA GLRTGNIYSPFPEEMNRKLTGGVASLHFAPTETAKANLLREQVQENHIFVTGNTVIDALM KTVSPNYRFADPVLQKIDFRTKKVILLTTHRRENLGEPMRHIYKALRAVTEEIGDAEIVF PVHRNPLVRRAVEEELAGAARVHLIDPLDYEPFANVMSRSYLIVTDSGGIQEEAPSLGKP VLVLRDTTERPEAVQAGTVRLIGTDKERVYTETKRLLTDSAAYDTMRRAVNPYGDGHAAA RIAAAVLFATGKTASRPDEFHLSL >gi|290780639|gb|ADGP01000033.1| GENE 78 88751 - 89035 481 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969215|ref|ZP_06560740.1| ## NR: gi|290969215|ref|ZP_06560740.1| hypothetical protein HMPREF0889_0745 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0745 [Megasphaera genomosp. type_1 str. 28L] # 1 94 1 94 94 181 100.0 2e-44 MKQNKKRTAVSTDDRSNRSDWLHVLVLVSSFGFTLLGSIGVGIAVGYVADRYLHIAPWGL IGFGLFGAFSGFYSLYKQVLAYLGEPLKQTKEKT >gi|290780639|gb|ADGP01000033.1| GENE 79 89045 - 89431 392 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969216|ref|ZP_06560741.1| ## NR: gi|290969216|ref|ZP_06560741.1| hypothetical protein HMPREF0889_0746 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0746 [Megasphaera genomosp. type_1 str. 28L] # 1 128 1 128 128 229 100.0 5e-59 MEELLRYIKRTLLQLIGLTVVGAAVFYAVGLPHVVLGWCIGSGINIVYFAMLGSRSARAV KLPPECVVQFIRGGFALRFIVVCLAMIIIVQFPVINFWGAVGGCFSYRLVVFADAAWTHI HVRKRKEV >gi|290780639|gb|ADGP01000033.1| GENE 80 89435 - 90106 789 223 aa, chain + ## HITS:1 COG:SA1911 KEGG:ns NR:ns ## COG: SA1911 COG0356 # Protein_GI_number: 15927683 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Staphylococcus aureus N315 # 19 223 20 240 242 114 34.0 1e-25 MEMHAGHHLVVQLLGMNVNWDTLLMTWLVAALVIIVTVGATRGRALVPSGMQNVMEMIIE ALLNQFKQTLGPKYGQVVSVLLTMFFFILFANELGMIPSHHFVLASPTTDLNTTVALAII SSFMVHFMAVKNRGPKKHLKHYLEPFIPFIAMNILEEFTKPLTLAFRLFGNILAGEIMLE VLYYLAPVGVPIVWIAFSLIIGLIQAFVFTILTTAYLAPSFRD >gi|290780639|gb|ADGP01000033.1| GENE 81 90157 - 90414 438 85 aa, chain + ## HITS:1 COG:no KEGG:Selsp_1844 NR:ns ## KEGG: Selsp_1844 # Name: not_defined # Def: ATP synthase F0, C subunit # Organism: S.sputigena # Pathway: not_defined # 1 81 1 81 84 63 56.0 3e-09 MEKAIVLALSAMGAAIGMGLAALGAAIGDGNAAAKMLEGTARQPEMAGKLFVNMLISVGL IEALPIIAVVIGIILVFANPFASMF >gi|290780639|gb|ADGP01000033.1| GENE 82 90463 - 90957 722 164 aa, chain + ## HITS:1 COG:BH3758 KEGG:ns NR:ns ## COG: BH3758 COG0711 # Protein_GI_number: 15616320 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Bacillus halodurans # 1 157 1 158 162 84 39.0 1e-16 MVDINGTLILQFVNFIVLVLILAKFAYKPLLKVMEERRQRIAADLDEAAKAKTEAAQLKA DYEAQLRDARARAQEIVDKAVKAADREAQVQLDAVREQIAREKEIAQAEITNEREAALKQ MRQEVVTLSMAVAEKLLHKNMNDAQNEKLVADYLDQLPHHAKGN >gi|290780639|gb|ADGP01000033.1| GENE 83 90960 - 91526 753 188 aa, chain + ## HITS:1 COG:BH3757 KEGG:ns NR:ns ## COG: BH3757 COG0712 # Protein_GI_number: 15616319 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Bacillus halodurans # 1 177 1 178 183 98 34.0 6e-21 MIPEVVYGKYSQALFGIAEEQHKVEEFGKDLRLIRDTMQENEALRKFICHPLIGAQTKKD TLKQIFAARVTAMVMQFLYVMIDRRREAVIISAIEGFITLVRQAQHIEVAKIRVVKPLTA EEEQKLIAGLEKITGKKIEPMYYTDPSIIGGITVQIGDRLIDGSVKRQLQDLQYKLLHTD EVNEVTGE >gi|290780639|gb|ADGP01000033.1| GENE 84 91526 - 93061 1850 511 aa, chain + ## HITS:1 COG:CAC2867 KEGG:ns NR:ns ## COG: CAC2867 COG0056 # Protein_GI_number: 15896121 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Clostridium acetobutylicum # 1 505 1 505 505 671 67.0 0 MNMKPEEITAIIKKQIEDYNVEMNVDDVGTVLEVGDGIAHVYGLDKVMSGELLELPHGVK GLALNLEEDNVGAVLLGDDSEIKEGDTVKRTGKVMSVPVGEAMMGRVVNPLGAPIDGKGP IQTKETRLVEVTASGIADRQPVKVPLQTGLKSIDSMVPIGRGQRELIIGDRGTGKTAIAI DTILNQKDSGVICVYVAIGQKASTVARVVRTLEENGAMAYTIVVAATASDGAPLQYLAPY SGVSIAEYFMYQGKDVLCVYDDLSKHAQAYRAMSLLLRRPPGREAYPGDVFYLHSRLLER AAKMSDDLGGGSITALPIIETLAGDLSAYVPTNVISITDGQIFLETEAFNAGIRPAINVG LSVSRVGGSAQIKAMKKVAGTLRLDLAQYRELAAFAQFGSDLDKSTKAQIDKGERTMQLL IQPQYKPMTVEDQVMQIYLAVNNYLMPVQVKEVTQFADGFISFMHDNYPEVGESIKTTKE LGKDMEEKLRRAIDEYTEQYGASHELVKEEE >gi|290780639|gb|ADGP01000033.1| GENE 85 93065 - 93925 954 286 aa, chain + ## HITS:1 COG:BH3755 KEGG:ns NR:ns ## COG: BH3755 COG0224 # Protein_GI_number: 15616317 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Bacillus halodurans # 1 286 1 285 285 197 38.0 2e-50 MPSAREINRRIKSVTNTQQITKAMKMVSSVRLRRAQDRALATAPYTEKIEGMLQRVCAAS SGSNNPLLAAKSDSQKVCYIVVGADKGLAGAFNANINKAMAAAVKDLPRTSFVLFTVGRK PAEYLQHLHLTADRKWSGFSDKPQFTDAQAIAQEAAHAFVTGEVSAVKIIYTNFKSALAQ EVTQVDLLPIAKPAEEHTRSQEAYLFAPEPEAVLHALLPQYLDMVVYNSLLQSAAGELGA RMTAMTSATDNAGELIEKLTVHYNKVRQAGITNELTEIVSGANALQ >gi|290780639|gb|ADGP01000033.1| GENE 86 93965 - 95383 1676 472 aa, chain + ## HITS:1 COG:CAC2865 KEGG:ns NR:ns ## COG: CAC2865 COG0055 # Protein_GI_number: 15896119 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Clostridium acetobutylicum # 1 469 1 463 466 666 71.0 0 MSNNIGKVVQVIGPVIDVRFASEADLPAIYNAIHITGGNGAQAVDLITEVMQHLGDDVVR CVAMSSTDGIVRGMDAEDTGSPIKVPVGKGVLGRIFNVLGQAVDKVDAKVEAEAYWPIHR PAPKFDEQATGTEILETGIKVVDLIAPYSKGGKIGLFGGAGVGKTVLIMELIHNVATEHG GYSVFTGVGERTREGNDLWNEMKESGVISKTALVYGQMNEPPGARMRVGLTGLTMAEYFR DKEHQDVLLFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLGTDVGALQERITSTKSGSI TSVQAVYVPADDLTDPAPAATFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIG EDHYQTARAVQAILQKYNDLQDIIAILGIDELSEEDKLTVARARKIQRFLSQPFAVAEQF TGQPGRYVPLKDTIAGFKEILSGACDDMPEQAFYMVGNIQEAHEKAKTLKGE >gi|290780639|gb|ADGP01000033.1| GENE 87 95387 - 95809 583 140 aa, chain + ## HITS:1 COG:BH3753 KEGG:ns NR:ns ## COG: BH3753 COG0355 # Protein_GI_number: 15616315 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus halodurans # 8 134 4 131 133 102 45.0 2e-22 MADTKKKLHLEVITPDAAVLNEDVDFIIARALDGDLGILPGHAAIIASLDINPLVYEING KKNTLAVAAGFLEVNGETATVITSAAEKAGEIDVVRSEHAKERAEKRLHGKRENIDVERA ELALKRALCRLQVAHNYGGK >gi|290780639|gb|ADGP01000033.1| GENE 88 95933 - 96238 468 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969225|ref|ZP_06560750.1| ## NR: gi|290969225|ref|ZP_06560750.1| hypothetical protein HMPREF0889_0755 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0755 [Megasphaera genomosp. type_1 str. 28L] # 1 101 1 101 101 173 100.0 3e-42 MKSIRDYDVLITILRNDKTIEQQIKETATSPNLKMLVDTYVIHGEQPHVRFLEIHTNADG KADFDTLRHVRIQKEDVDEMNRLLREAGKFKEQVRSTLHQI >gi|290780639|gb|ADGP01000033.1| GENE 89 96421 - 96696 379 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969226|ref|ZP_06560751.1| ## NR: gi|290969226|ref|ZP_06560751.1| hypothetical protein HMPREF0889_0757 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0757 [Megasphaera genomosp. type_1 str. 28L] # 1 91 1 91 91 174 100.0 2e-42 MKSINDYDVFISIQHKDQPINEQIKITATAPHRKILVDTFRVNGQEDRFLELCSGADGKP DFSTLRHVRLDEESIKEANKALIVSGTIYKK >gi|290780639|gb|ADGP01000033.1| GENE 90 96664 - 97998 1193 444 aa, chain - ## HITS:1 COG:SP0176_1 KEGG:ns NR:ns ## COG: SP0176_1 COG0108 # Protein_GI_number: 15900113 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 8 208 3 203 203 272 65.0 1e-72 MTTQKRPFHTIEEALEELRAGHLIIVTDDPDRENEGDLICAAQFCTTENMNFMATHGKGL ICMPMSGEYAHKLNLEPMVAHNTDNHETAFTVTIDHVHTTTGISAEERAYTTRKCVEETI RPEDLRRPGHNFPLIAKKGGVLTRNGHTEATVDLLRLAGLKQVGLCCEIMADDGRMMRTP QLWDMADTYGLKFITIHDLQNYCRRHDKHVTREAVANMPTKFGDFKIYGYVNDLTGEHHV ALVKGDISNGKDILCRVHSECLTGDVFGSCRCDCGQQLAAALQKINLEGRGVLLYMRQEG RGIGLINKLKAYALQEEGYDTVEANEKLGFAPDLREYWIGAQILQDLGVKELRLLTNNPE KIYGLDGFGVEITQRVPIEMEAQKYDKFYLETKKEKWATFCRIYINRQKALPSIEGSAFF NISLPLSPPNHRRLLFFINRATDN >gi|290780639|gb|ADGP01000033.1| GENE 91 98464 - 99939 1394 491 aa, chain - ## HITS:1 COG:SP0176_1 KEGG:ns NR:ns ## COG: SP0176_1 COG0108 # Protein_GI_number: 15900113 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 8 208 3 203 203 268 64.0 3e-71 MTTQKRPFHTVEEALEELRAGHLIIVTDDPDRENEGDLICAAQFCTTENMNFMATHGKGL ICMPMSGEYAHKLNLEPMVAHNTDNHETAFTVTIDHVHTTTGISAEERAYTTRKCVEETI RPEDLRRPGHNFPLIAKKGGVLTRNGHTEATVDLLRLAGLKQVGLCCEIMADDGRMMRTP QLWDIADTYGLKFITVHDLQNYCRRHDKHVTREAVADMPTKFGDFKIYGYVNDLTGEHHV ALVKGDISNGKDILCRVHSECLTGDVFGSRRCDSGQQLAAALQKINREGRGVLLYMRQEG RGIGLINELKAYALQEEGYDTVEANEKLGFAPDLREYWIGAQILQDLGVKELRLLTNNPE KIYGLDGFGVKITQRVPIEMKAQKIEMESADEDERDRHLLQPDEYCRAGGASHVLLAEYK KIWYLRKSFAEAVRAESLCVSKEDVVVPIEREAELLQKITATTARDLLTVQPVTQTGVAN SPVADCDVRHQ >gi|290780639|gb|ADGP01000033.1| GENE 92 99936 - 100322 78 128 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHGSRNSGHEESRQTGPRSRENVPSSVRFSVLCTLQEHILDVLYSHILNIQSSGQGVIPD RRYSPRTLRRTIWCNSKTDSIVWMKEDVYLFFWLHKKSPETVIQFGAFLSVSLLITTYPA KPKGGYHL >gi|290780639|gb|ADGP01000033.1| GENE 93 100407 - 100550 62 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969229|ref|ZP_06560754.1| ## NR: gi|290969229|ref|ZP_06560754.1| hypothetical protein HMPREF0889_0761 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0761 [Megasphaera genomosp. type_1 str. 28L] # 1 47 1 47 47 94 100.0 2e-18 MPGSVVDGDNSPAAGMSDRRTVTWLYFGSKEGPGQRQRFMHVKNILL >gi|290780639|gb|ADGP01000033.1| GENE 94 100571 - 101974 1037 467 aa, chain - ## HITS:1 COG:CAC2542 KEGG:ns NR:ns ## COG: CAC2542 COG0277 # Protein_GI_number: 15895804 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Clostridium acetobutylicum # 3 463 5 465 467 295 34.0 1e-79 MSYEKVTASVQTRLRQIVGAAYVLTERETMLPYSHDEVTDPSYHHLPEAVVLPASAEETA AVVKLANTCHIPVVPRGGGTGLACGAVPIYGGIVLSTERLNHICEIRPDGLYAVVEAGVR TADLQAAAEARGLFYAGDPCSGDSCCIGGNIATNAGGNRAVKYGTTRHQIYALQIVNPTG HILSVGAPLRKQSTGYCLEQLLAGSEGTLGIITQATLKLFPKPPYCSDILAVFPTAEAAV TLASTLLQKGILPTCVEFLDQTTLHAIADFLQEPLPGQADGHYVIIEMESADEDERDRHL LQLDEYCRAGGASQVLLAEYKKIWHLRKSFAEAVRAESLCVSKEDVVVPIEREAELLQKI AVTTARYRLTVRLAAHAGDGNLHLNILKPPAEDYDAWQRRVQAHQQELYTYIYQLGGRLS GEHGIGYKRKQLMKKFTNPEELAMMKAIKQAWDPNNILNPGKIFDLP >gi|290780639|gb|ADGP01000033.1| GENE 95 102136 - 102474 389 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969231|ref|ZP_06560756.1| ## NR: gi|290969231|ref|ZP_06560756.1| septum formation initiator [Megasphaera genomosp. type_1 str. 28L] septum formation initiator [Megasphaera genomosp. type_1 str. 28L] # 1 112 1 112 112 140 100.0 2e-32 MVPQEQRHRRPQRRLRRRNGRHGKTTYRIFPMYRLLRAVIILAGLFFLAYRGAELWRIHD NMRQTMQQKQQLQQENTALKQQKARLEDPAEVVKEARRQFGLAKPGEIPYKR >gi|290780639|gb|ADGP01000033.1| GENE 96 102593 - 103024 352 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372859|ref|ZP_03856338.1| predicted RNA-binding protein with ribosomal protein S1 domain [Veillonella parvula DSM 2008] # 1 140 1 131 133 140 54 6e-32 MIIEAGKVLEGTVTGITKFGAFVELPDKKVGLIHISEVANEYVKDVHDFLKVQDVVKVKV LAVDDKGKIALSIKQAQPMPEKKEFRPHREFRQHSGFDNRRTASSASFEDRLSKFLKESD ERLMDLKRNTESKRGGRGARHAD >gi|290780639|gb|ADGP01000033.1| GENE 97 103121 - 104053 1379 310 aa, chain + ## HITS:1 COG:all3552 KEGG:ns NR:ns ## COG: all3552 COG0248 # Protein_GI_number: 17231044 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Nostoc sp. PCC 7120 # 7 290 24 325 550 123 33.0 4e-28 MTKQEYAVIDMGTNSLRLMTGWKDESRDRWVLSPKQVETTRLGLHAEQTGRLSEAGMQAS FAVLERWRSRLAQVPVCVVATSAVREAKDGKAFLAEVRARFGWHCRAITGWEEASLGFCG VTAELPAQQCVLTVDIGGGSSEVASGMRGDVHWSHSYPVGAVRLQEQREREGLSLDDLVS RCEKQWLAMPLQAETVIGMGGTITAAAAVELGLTVYDPQQVQGYYIGLEKLTALIQRLDR MGAEERRHVCGLPADRSEIIVPGLVILWSFLCHYGLPGIQASERDLMEGVFYRHSFHDAA WRGGAGVGTK >gi|290780639|gb|ADGP01000033.1| GENE 98 104050 - 105426 1082 458 aa, chain + ## HITS:1 COG:CAC3204 KEGG:ns NR:ns ## COG: CAC3204 COG0037 # Protein_GI_number: 15896451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Clostridium acetobutylicum # 1 443 1 452 461 189 28.0 1e-47 MIGRVAAFCREHGLVHDGDLVLAACSGGPDSLALLDVLARCRERLHIEVAVAYINHGIRA AAFDEERRVQQAAAARGCPCYIRRTAVPALARRRKQSLETAAREERYRLLRDVQRQIRAQ SIAVAHHQNDQAETVLWHLVRGSGLTGLAGMRPRREKIIRPFLCVTRAEITDYAARRHLH PCHDETNDELHCTRNKLRLQYLPFLAQLNPAIIADLNRLAAVVQAEDDVLRQQTEEAYRR TAQVRAEGIVLSKTRLAEQPTALQRRLIRRAYEALTGHMTGLSLEQVETVRHLLDKEPGK RFAMRAFYVQRTYEALVCTARPPVSRTAEIAAALPFGTPQVYRLGAWRLQLQVTTKPVKP APNQWLIDYDRLSPDTVLRCRRPGDRWLGKDHTTALKKIFTAQHLMPAQRATLPLLCQGN LVVWLAGRGACPTLAVQAETKRIGIITLLGGTEYASGY >gi|290780639|gb|ADGP01000033.1| GENE 99 105410 - 105949 697 179 aa, chain + ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 178 1 178 178 207 54.0 1e-53 MHQDIKEILFTEAQIKQRVQELGRAITRDYAGKPVVLCGILKGAVTFFTDLARTIEAPVQ FDFMSCSSYGDGTTSSGSLTIRKDLDTDVRGKDLLVVEDIIDTGVTLSHLVPLLQERGAR SVKLATLLSKPSRRQVEVPVTYNGFEIPDAFVVGYGLDYAGLYRNLPYIGVLKENVYQA >gi|290780639|gb|ADGP01000033.1| GENE 100 106056 - 107996 1488 646 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 33 632 34 635 636 577 50 1e-163 MLSKFVRNVGLNLLIIVVAVTIIDAVTTNHVDKSEISYTNFLNQVHQKKVDAVQITDDHS ISGQLKDGTSFSSYAPTDAALMSDLRNADVNVVAKPPKQPSWWMSLLSSVLPILILIGVW FFIMQQTQGGGGRIMNFGKSHAKLHGEGKIKVSFKDVAGEDEAKEELSELVEFLRNPGKY NDIGAKIPKGVLLFGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLF LQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAAT NRPDILDPALLRPGRFDRQITVDRPDLRGRKAILEVHAKGKPLGKDVDLGIIAKKTPGFT GADLGNLLNEAALLAARADKRIINMPELEEASEKVCFGPERRSHVISDKEKRLTAVHESG HALIAYLLPEADPVHKVTIIPRGRAGGYTMMLPEEDRSYETKSYYLAQIRVALGGRAAEE VYFNEISSGASGDLQNVTRIVRQMITRLGMSPKLGPMIFGEQQEQVFLGKNLGHERNYGE GVAELIDREMHEIVTTAYDDVLRMLREHMDTLKHMSDALIEVETIDRKQVDNLVKYGTLT APEETAITAGEEDVQENVAPPAQTETSEKTEAVSPWGNPEYSDTKK >gi|290780639|gb|ADGP01000033.1| GENE 101 108306 - 109292 1089 328 aa, chain + ## HITS:1 COG:BS_birA_2 KEGG:ns NR:ns ## COG: BS_birA_2 COG0340 # Protein_GI_number: 16079301 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Bacillus subtilis # 79 319 3 244 245 182 38.0 1e-45 MRQDILDYLTAHEGEFVSGQRISEALGISRTAVWKHIKVLKARGYVIESYTKKGYCLREA PELIVPEKIKAQVQTEFFGKQFIYLEKIDSTNTYAKKIADSGAPEGTVVLAEEQRGGRGR LDRSFLSPFAQGLWFSLILRPSFSPMEVSKLTLMAAVAVTKALHRCGLTECGIKWPNDIL VHDKKVVGILTELHASAEKINYVVMGIGINVSLTKKMLPRELKRIVTSFAMENVEALRAD ILKTVLEELEHYYISVSENGFAPIIEEWKVLSCMMNREVEVSAIDRIFKGKAVGLDEDGN LLVETNKGTERVLAGDVHVRPLVMRRTN >gi|290780639|gb|ADGP01000033.1| GENE 102 109429 - 110193 1182 254 aa, chain + ## HITS:1 COG:BH0086 KEGG:ns NR:ns ## COG: BH0086 COG1521 # Protein_GI_number: 15612649 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Bacillus halodurans # 1 253 1 253 254 306 56.0 2e-83 MLLVIDVGNTNIVLGVFQGKKLLDHWRISTNRLRTTDEYGVLIRNLFYLNGVNAKEIKDI IISSVVPPVMPTLERMCQRYFGLVPLVIGPGVKTGMDIKYDNPREVGADRIVNAVGAYEK YGGPVIIIDFGTATTFCAVDKKGNYLGGAICPGIGISTEALVQRTAKLPRIEIRRTDRVI CRNTVESMQAGVFYGFVGQVDGLIACMHKELGAKAKVVATGGLAVVIAPATKSIDVVEPL LTLEGLRSIYERNC >gi|290780639|gb|ADGP01000033.1| GENE 103 110177 - 111172 611 331 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittHH] # 9 323 1 315 326 239 40 5e-62 MNEIVEAPLRIGSVPLASRVILAPMAGVCDLPYRRIAKAHGAALVCTEMVSDKGLVYHNG HTQEMLQIAKDEHPLSLQLFGADPASMAYAAAAAEEAGADLVDINMGCPVKKVVRNGAGA ALLQDLPRAEAIIRAVVQAVSIPVTVKMRAGWDAAHVVAPALAERAEAAGAAAVAVHGRT REAFYSGKADWRVIADTVQAVSIPVIGNGDVVDGPSARDMLQQTGCAAVMVARAAQGNPW IFSQITHYLTTGEMAAPPTAWERYTQILAHLEALVAYKGEYIGIREMRAHASWYTRGLYG SAALRERINRTVSVAEFRAVVEEMRRHAAGD >gi|290780639|gb|ADGP01000033.1| GENE 104 111285 - 111770 763 161 aa, chain + ## HITS:1 COG:lin1531 KEGG:ns NR:ns ## COG: lin1531 COG0782 # Protein_GI_number: 16800599 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Listeria innocua # 7 156 9 154 160 123 50.0 1e-28 MNTETLITQEGLQKLKDELNELKSVRRITVSKRIQEAIALGDLSENSEYDDAKNEQAFIE GRIAELEGKIRTAKIIQAADDSAAKVRLGSHVVLEDVETGERFDYTVVGTAEADPFNNKI SNESPVGKAILGQLISQQEPVVVTVKAPAGELQYRILPPEA >gi|290780639|gb|ADGP01000033.1| GENE 105 111793 - 113325 1846 510 aa, chain + ## HITS:1 COG:BH0098 KEGG:ns NR:ns ## COG: BH0098 COG1190 # Protein_GI_number: 15612661 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Bacillus halodurans # 17 498 7 493 501 569 57.0 1e-162 MADTKHTDTTAADIEKLNDQMHVRREKMEQFAAAGVYPFGEKYEWDHHAADVKQAATTLE TAATVVRLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKLLDIGDIIG VEGTVFTTHTGETTIRVSDWKLLTKALRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKDT FIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMYLRIAPELH LKRLLVGGLERVYEMNRCFRNEGIDTRHNPEFTTVELYQAFGDLEDVIAITEDIVATLAK QLYGTTKITYLDTEIDLTPPWKRMTMIEAVAEFTGKDFTGVTDLAAAQAIADELQVPYGK FDGIGKIINACFEEYVEEKLIQPTIITGHPLEISPLTKQQRENPLLTYRFEAFIYGRELA NGFSELNDPLDQRRRFTAQMEERERGDDEAHQMDEDYCRALEYGLPPTGGLGIGIDRLVM FLTDSASIRDVLLFPTMKPIGKEDEENQGF >gi|290780639|gb|ADGP01000033.1| GENE 106 113566 - 113847 91 93 aa, chain + ## HITS:1 COG:no KEGG:SZO_12680 NR:ns ## KEGG: SZO_12680 # Name: not_defined # Def: membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 93 1 93 93 107 88.0 1e-22 MRWMIKIVLFPISFLLSILTAFLTFLLGIGTALLYLLMMFCIFGAIASFLQKEVTIGIEA LIIGFLVSPYGVPMIGATVIAFFQGINEEIKSI >gi|290780639|gb|ADGP01000033.1| GENE 107 113935 - 114714 870 259 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1349 NR:ns ## KEGG: SDEG_1349 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 259 1 259 259 434 89.0 1e-120 MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGISFKNNWIDKEN RVFIYFTVEEIMRRRNISKPTAIKTLDELDSKKGIGLIERVRLGLGKPNIIYVKDFMSVF QAKGNDFQKSKNFTSEVKDVDLRSKENELQEVKNVDSNYIENNKSKYSKREYSFCENGLG IFQNVFLTDEDISDLQITLNTQLDNYIERLSAYIKSTGKIYKDHKATILSWFYKDQGKSK QPKTSNVPTWEEYNKGEHL >gi|290780639|gb|ADGP01000033.1| GENE 108 114711 - 115562 275 283 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 46 261 41 266 282 110 31.0 3e-24 MKRELEKIMIEDVEFAYDSEKEYIKDGHAYCKVCHERKDGDVMEFFGNKMILRVACKCDR EIEKQKKRREKQMEIERLKRTCFNSMREWSYTFENYQGEENQSLMIAKNFVEDYEKMKKE NIGLLFYGSVGSGKTYLACSIANSLIEQYQISVKIRNFAQIINELQKNSFDFDKNAYIES LVNTSVLILDDLGIERDTSYAKEQVYNIVNSRYLKQKPTIFTTNLSYDTIQNCKDSVEYQ RIYSRIIEMCIPVMVVGEDFRKFIQRDKLTRNKDRLLNGGERT >gi|290780639|gb|ADGP01000033.1| GENE 109 115559 - 116044 441 161 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0732 NR:ns ## KEGG: SEQ_0732 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_equi # Pathway: not_defined # 1 161 1 161 161 163 89.0 3e-39 MINEEIARKTLNMEVRAGKVTGKMLLDLIRKLLKESEKIGGLEKLVGSKGNEVKLKDMVK KGQLEEIPVEETELKELKKELNRYGVKFSVMKDKESGKYSVFFQAKDMKVMDKAFKHALS ESEKKTERKESIHKNIEKFKEMAKNTVSKDKIKNKQKEQSL >gi|290780639|gb|ADGP01000033.1| GENE 110 116041 - 117825 1172 594 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 91 561 97 562 591 222 32.0 2e-57 MIEKILKDIKGLFKVQDKAKFLKQNIPYLAFFYVGNIFSHHIRAYTGGDVIDKIFQGILE LNTMSFIPSIHLTDILIGIGVAALIKFIVYSKGKNAKKFRQGKEYGSARWGTRKDIEPYM DEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYC VTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYIRSEKDILKLVQTIIANT KGEGEKAGEDFWVKAEKLYYTALIGYIWYEAPREEKNFATLLDMIDASEVREDDETYMNP IDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMCEDEL ELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPFHVRCLLDE FANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLFLGGKEK TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGKCIFQLR GVRPFLSDKFDITKHKNYKLLEDYDKKNLFDIESYMKRKGKAKLNRETVITRVQ >gi|290780639|gb|ADGP01000033.1| GENE 111 117993 - 118304 308 103 aa, chain + ## HITS:1 COG:no KEGG:CD0413 NR:ns ## KEGG: CD0413 # Name: not_defined # Def: putative single-strand binding protein # Organism: C.difficile # Pathway: not_defined # 1 91 1 91 103 133 94.0 2e-30 MKQEMININANLLAEPTFSSFDKEGETVEVANFTLVKKYGKGKEYINCAAYGEKSEKAKD FEKGDLIHIFGYFKKREKEGKTYKNFVVKSYNKIEKKEESEEE >gi|290780639|gb|ADGP01000033.1| GENE 112 118308 - 118448 284 46 aa, chain + ## HITS:1 COG:no KEGG:CD1852 NR:ns ## KEGG: CD1852 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 44 1 44 71 72 93.0 7e-12 MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGANAHVR >gi|290780639|gb|ADGP01000033.1| GENE 113 119089 - 121008 1044 639 aa, chain + ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 2 638 3 647 652 453 37.0 1e-127 MKIINIGILAHVDAGKTTLTESLLYASGAISEPGSVEKGTTRTDTMFLERQRGITIQAAV TSFQWHRCKVNIVDTPGHMDFLAEVYRSLAVLDGAILVISAKDGVQAQTRILFHALRKMN IPTVIFINKIDQAGVDLQSVVQSVRDKLSADIIIKQTVSLSPEIVLEENTDIEAWDAVIE NNDELLEKYIAGEPISREKLAREEQQRVQDASLFPVYHGSAKNGLGIQPLMDAVTGLFQP IGEQGGAALCGSVFKVEYTDCGQRRVYLRLYSGTLRLRDTVALAGREKLKITEMRIPSKG EIVRTDTAYQGEIVILPSDSVRLNDVLGDQTRLPRKRWREDPLPMLRTTIAPKTAAQRER LLDALTQLADTDPLLRCEVDSITHEIILSFLGRVQLEVVSALLSEKYKLETVVKEPSVIY MERPLKAASHTIHIEVPPNPFWASIGLSVTPLSLGSGVQYESRVSLGYLNQSFQNAVRDG IRYGLEQGLFGWNVTDCKICFEYGLYYSPVSTPADFRSLAPIVLEQALKESGTQLLEPYL SFILYAPQEYLSRAYHDAPKYCATIETAQVKKDEVVFTGEIPARCIQAYRTDLAFYTNGR SVCLTELKGYQAAVGQPVIQPRRPNSRLDKVRHMFQKVM >gi|290780639|gb|ADGP01000033.1| GENE 114 121059 - 121826 569 255 aa, chain + ## HITS:1 COG:MA3534 KEGG:ns NR:ns ## COG: MA3534 COG0500 # Protein_GI_number: 20092341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 38 229 9 210 241 87 29.0 2e-17 MEYSKEDLMEAKKQIWGVGENMGTEESKKIWEENAQFWDNAMGDESNEFHREVVRPKVTE LLSPNPADYILDIACGNGNYSSYLAQRGASVVAFDYSKKMIELAKRRQSQYAKQIEFCVA DATDRKSILELKRNRAFTKAVSNMAIMDITDIEPLLMAVYELLQESGIFVFATQHPCFVT LTEKYMTPHSYYDIAIEGQPKEQIYYHRSIQDIFNLCFRAGFVIDGFYEECFKTNKEIPM VMIVRLKKVKRDSLK >gi|290780639|gb|ADGP01000033.1| GENE 115 121998 - 122420 144 140 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237745701|ref|ZP_04576181.1| ## NR: gi|237745701|ref|ZP_04576181.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] conserved hypothetical protein [Oxalobacter formigenes HOxBLS] # 1 140 26 165 165 265 100.0 8e-70 MTDQIAYQEYIQRRYNAFCKTVIRCAALDKILKLKRQWERQVSLDYLMNEKFVQFAASEP DEEYPFTVCGQTVLLCNAALADAISVLPEQTREEILRYYFLRQPQRVIGACIGRSRSTAG RHIQLALQRLREEMGVSRYE >gi|290780639|gb|ADGP01000033.1| GENE 116 122413 - 122625 133 70 aa, chain + ## HITS:1 COG:no KEGG:LAC30SC_09595 NR:ns ## KEGG: LAC30SC_09595 # Name: not_defined # Def: hypothetical protein # Organism: L.acidophilus_30SC # Pathway: not_defined # 1 64 3 66 67 96 68.0 3e-19 MSRLLPYETILKAREGDPEAVNAVLLHYAGYIRYFSKVNGQVNAEVEDYVKQRLIDCQFK FRLDEPPDKS >gi|290780639|gb|ADGP01000033.1| GENE 117 122588 - 122866 68 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225019546|ref|ZP_03708738.1| ## NR: gi|225019546|ref|ZP_03708738.1| hypothetical protein CLOSTMETH_03499 [Clostridium methylpentosum DSM 5476] hypothetical protein COPCOM_03485 [Coprococcus comes ATCC 27758] conserved hypothetical protein [Oxalobacter formigenes HOxBLS] conserved hypothetical protein [Subdoligranulum variabile DSM 15176] conserved hypothetical protein [Clostridium sp. M62/1] hypothetical protein HMPREF9443_00918 [Phascolarctobacterium sp. YIT 12067] hypothetical protein [Roseburia sp. A2-183] hypothetical protein CLOSTMETH_03499 [Clostridium methylpentosum DSM 5476] hypothetical protein COPCOM_03485 [Coprococcus comes ATCC 27758] conserved hypothetical protein [Oxalobacter formigenes HOxBLS] conserved hypothetical protein [Subdoligranulum variabile DSM 15176] conserved hypothetical protein [Clostridium sp. M62/1] hypothetical protein HMPREF9443_00918 [Phascolarctobacterium sp. YIT 12067] # 1 92 1 92 92 169 100.0 8e-41 MTPDAVVSTRCWRNPFSLPSTTGKCSKCQTPGQKNSLLAYYYNRQGAKWPGAEPDNKKSS KSFSRLTAFAGRVGGGWYSVFMTCPVVRQAGT >gi|290780639|gb|ADGP01000033.1| GENE 118 123123 - 123521 245 132 aa, chain + ## HITS:1 COG:no KEGG:LAC30SC_09585 NR:ns ## KEGG: LAC30SC_09585 # Name: not_defined # Def: hypothetical protein # Organism: L.acidophilus_30SC # Pathway: not_defined # 1 132 1 132 132 206 81.0 2e-52 MRKKYNTPHRSRVVKTRLSEDEYADFTARLAPYGISQSEFLRQAIRRATIRPVVHVSSVN DELLSAVGKLTAEYGRIGGNLNQIARYLNEYGVPYNTLSGEVRAAISDLAVLKYEVLKKV GDAVGNTQAYQL >gi|290780639|gb|ADGP01000033.1| GENE 119 123493 - 125118 434 541 aa, chain + ## HITS:1 COG:no KEGG:Tresu_1917 NR:ns ## KEGG: Tresu_1917 # Name: not_defined # Def: Relaxase/mobilization nuclease family protein # Organism: T.succinifaciens # Pathway: not_defined # 1 541 1 555 555 891 86.0 0 MATLKHINSKNADYGAAEQYLLFEHDEFTMKPVLDETGRLIPREDYRLSTLNCDGEDFAV ACMRANLRYQKNQRREDVKSHHYIISFDPRDGPDNGLTVDRAQALGEQFCKEHFPGHQAL VCTHPDGHNHSGNIHVHIVINSLRIEEVPFLPYMDRPADTKVGCKHRCTDAALRYFKSEV MEMCHREGLYQIDLLNGSKNRVTDREYWAQKKGQAALDKQNAPMIADSITPRQTKFETNK EKLRQTLRKALATAASFDEFSSLLLQEGVTVKESRGRLSYLTPDRTKPITARKLGDDFDR AAVFAVLEQNAARAAEAPARSPDPPRTIKDRLQVARAEIAAPKQDGVQRLVDIEQKMAEG KGRGYERWAKIHNLKQAAKTLSVYQQYGFTSPEQLEAAVDTAYQKMRQTSGELKALETKL QGKKKLQRQVLAYAQTKAARDGLRAQKSEKARAAYRQAHESDFIIADAAARYFKAHGITK LPARKALQAEIEQLISEKDGLYNTYHEQKQRFKELQTVKRNIDQILRRDEPHRRKEQSHE R >gi|290780639|gb|ADGP01000033.1| GENE 120 126358 - 127200 536 280 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 31 278 27 281 282 135 32.0 6e-32 MKNEINAVLENMTTTIPEPEDYTGEDGLLYCGKCRKPKEAYFAPDKAAIFGRDRHPAECD CQRTAREEREAAEKRRRHLDTVEELKRRGFTDPTMRDWTFENDNGRNPQTGLARRYVEHW EDMRTDNIGCLFWGGVGTGKSYLAGCIANALMEKEIPVRMTNFALILNDLAASFEGRNEY ISRLCRYPLLILDDFGMERGTEYGLEQVFNVIDSRYRSGKPLIVTTNLTLDDLHNPEDTA HSRIYDRLLSMCVPVRFTGDNFRQETAKRKMESMKKLITD >gi|290780639|gb|ADGP01000033.1| GENE 121 127215 - 127409 215 64 aa, chain + ## HITS:1 COG:no KEGG:Tresu_1913 NR:ns ## KEGG: Tresu_1913 # Name: not_defined # Def: hypothetical protein # Organism: T.succinifaciens # Pathway: not_defined # 1 59 1 59 62 84 86.0 2e-15 MADNKQHDTRTTRRPDCVTEIRMGNSVLVVSGYFKKDTTTTAADKMARVLEAEAAATQEP TYPA >gi|290780639|gb|ADGP01000033.1| GENE 122 127474 - 127722 162 82 aa, chain - ## HITS:1 COG:no KEGG:BMQ_3660 NR:ns ## KEGG: BMQ_3660 # Name: not_defined # Def: hypothetical protein # Organism: B.megaterium_QM_B1551 # Pathway: not_defined # 17 81 1 65 70 73 72.0 3e-12 MVYSDLTKKSEVKGENMKYTIDELTAAKRQIDSTLHKLRETVKTFESKDNSERYKSQITL AKRRIKAFEIANYFIENEIKNC >gi|290780639|gb|ADGP01000033.1| GENE 123 127900 - 129516 1082 538 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 10 303 8 301 301 312 54.0 1e-84 MLRQATQNLITALYPRLSHEDELQGESNSISNQKRILETYAKQNGFTNLRWYTDDGFSGA NFQRPGFQAMLADIEAGKVGTVIVKDMSRLGRNYLQVGFYTEMLFPQKGVRFIAVNDNVD SASEGMDNDFTPLRNLFNEWLVRDTSKKIKAVKKSKGMSGKPVTSKPVYGYVMDEDENFI IDEEAAPVVQQIYQLCLAGNGPTKIARMLTEQQIPTPGTLEYQRTGSTRRYHPGYECKWA TNTVVHILENREYTGCLVNFKTEKPSYKVKHSIENPVEKQAIFENHHEPIIDKETWERVQ ELRKQRKRPNRYDEVGLFSGILFCADCGHVLYQQRYQNKDRKQDCYICGSYKKRTRNCTA HFIRTDLLTAGVLANLRQVTEYAAKHESRFVKLLVQQNEIGGKRKTAAAIKQLEQAQERI SEISRIIKRLYEDNVNGKISDERFMELSADYEAEQAELKKRAAALQAELDKSQAATVNAE KFMGIVRKHLAFEELTPTLLREMIEKIVVHECSYDENGTRRQDIEIYYSFVGKIDLPE >gi|290780639|gb|ADGP01000033.1| GENE 124 129719 - 130582 605 287 aa, chain + ## HITS:1 COG:no KEGG:CD0415 NR:ns ## KEGG: CD0415 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 287 1 287 287 492 98.0 1e-138 MFGIFDKIEEFFKELLLGGIQANLESMFLDINDKVGAVATDVGKTPMGWNGDVFAFIKSI NDSVIIPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMWIAVWLVSHAFEFS MAVFDVAQHMVNKAAGVINTSATVSGDQIVAMIDTLKEKGLGELVMILFETSLIKVAIEV ISIVIMLVVYGRMFEIYVYSSVSAIPFATMGNKEWGQIGTNYIKGLFALGLQGLFLMVCL GIYAVLVKTIQITDIHTSTMTILGYAVLLGLMMLKSGTLAKSVLNAH >gi|290780639|gb|ADGP01000033.1| GENE 125 130600 - 130863 328 87 aa, chain + ## HITS:1 COG:no KEGG:SZO_12880 NR:ns ## KEGG: SZO_12880 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 87 1 87 87 121 72.0 9e-27 MIKRKTVFTAVVIGAGVIAVIDRIKLFSKINDLEERTKDIGRCHNDFCILQERYNKNKDK QIESIQEEIGSVYEHMAELSKEKEDGR >gi|290780639|gb|ADGP01000033.1| GENE 126 130867 - 131256 258 129 aa, chain + ## HITS:1 COG:no KEGG:CD1855 NR:ns ## KEGG: CD1855 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 129 1 129 129 197 93.0 1e-49 MAYVPIPKDLKKVKTKVAFNLTKRQMIGFTLAGLVGLPVYLFMRKIVPNDIAVIFLIVST LPIFFITLFEKDGLTFEKYFKYIYLHKFYQPQKRVRKEVYLERQKKDSAGKVRTKQKNVK KSKTGLKAK >gi|290780639|gb|ADGP01000033.1| GENE 127 131168 - 133597 1532 809 aa, chain + ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 246 779 39 594 617 102 22.0 3e-21 MKDKRKIQQVKLEQNKKMLRSQRQDLKQNKGKSKKDKGGLLDLIFRKEPKRYTVEDTIPY LRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFANFLNSFDPSISIEFSYI NQLGRNEEMKSAIQIPDKKDGFDDIRLEFREMLKSQIVKGNNGLKKSKYVTFTVEADNLE QATSKLERLEIDILSNLKSMGVRAESLSGEERLKILHDILNPNKTFEFSYKNLRKRESTK TYIVPDEFNFTPSRYFKFGKFIGAVSHFQILASELSDRMLAEFLDIDDNINISFHIKAID QSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDER MFVVSIVFMNFAKTVQKLDNTISQISSISNKHNCKLKRLDHTQEQGLISVLPLGVNKIEI DRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGS GKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFNGEVIKVSSKSKDYLNPLDINMN YGDGDAPLKDKANFIMSMLELVVGGSGLTAEEKSVIDRCLPKIYEKYFDNPTPDNMPILQ DLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNKKLLCFDIKELGSQLKKIG MLVIQDQVWNKVSQNRGSKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQ NVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFF GNTIVPFLDKFPKDTILYQKMTTKPEEVR >gi|290780639|gb|ADGP01000033.1| GENE 128 133601 - 135733 495 710 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1791 NR:ns ## KEGG: CDR20291_1791 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 710 1 710 710 1097 89.0 0 MGKKLKKDFRERHKASLEREVIHSETFTTSEESKLKDADDYRGKIVHDKDRFQDKVHKKI NKVSSDNEKAYGTSKRNVRYRASDKDSVAAVSETGRSDYITEVKDGKIYDPLGKDLDNDG IIDRYDNDFRDSDYFESTYDVEDNLSHKEKSLENSFKNHKTQKSRYKRKNYSESLYTRRK DDAPKENKSEGKKTGKDAASEKVHSSLSKEQRKKLKKDMVKVSALSGLAKGSETVRDYLS HGSDENKGVEAGEKTADASSKLIHGIKKYSDKKKAKKGYDLKNKDYKIRKRKSKLEFHDA KENLKKTNEYKRANAYKRFQKKNQVKAAIRRENKSRLRNRIKENLIGSLKGSKKFIVRKA KGLMIIFIGLIILGTFFINFAGTGMTGFMNSTSSVLTTSYLSKPNVLNEINQSFSAMESE LQNEVDHVKNNYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFES MYDLEYREEVEIRYRTVTETYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKIFA NYPDNLKHYEALFLAQGNMGEAFGNSDLISANGGVGGGVEYEASSEVQKKIVNAAYITPS PGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRSKLKVGMLVAVESSSSGSTAG LTYGHVGIYIGDGKVMDNIGRIRVTTLDNWIASFCKHHPVGFGFPPNVKK >gi|290780639|gb|ADGP01000033.1| GENE 129 135745 - 135984 356 79 aa, chain + ## HITS:1 COG:no KEGG:SZO_12840 NR:ns ## KEGG: SZO_12840 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 79 1 79 79 75 84.0 7e-13 MKRELTVVKNKIKKLKDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMAKVN RQRVEMKKEKSNENQLEKE >gi|290780639|gb|ADGP01000033.1| GENE 130 135959 - 137503 1448 514 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1792 NR:ns ## KEGG: CDR20291_1792 # Name: not_defined # Def: putative cell surface protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 509 1 510 513 510 78.0 1e-143 MKTSWKKNKKFWTAALAVVVSISCLLGLWTVVYAHEQSLTEAPTSDKAVQTQVEVNVKYI FEDEKVYKEEKIKAEKGQLLDSGDLPMLPDNMKFIDEFLFYEVKGDGNDEIIRKVEKTEV KDKETQTEEEKPKEDESSQTKIPKTEDKSTQTELSKDDISKMEKDAKELQEKLDKLNSEM KDKDKLSDKQKEKIKELEAQIESLKEKTKKDKENKGLSEEMKKEMDKLNKKIKELEEKAN EANKAHVISNPPAPNSPISGIKTNSGISNQTPVNNTGKSTTTQASSENTVKDTSNSETKE KDIRYPNKLTPKAPANNNQDSSMDGTSKTVNTNKGVASAPSKARGTVTENKDNANKDYPI HHGDSGDNKETGLYSADARQFITFQTKNGKTFHLIINHDETQENVMLLTEVSEDDLLNMV EKKEAPKQEISKEESTKEEVKPEKKEEKSNLGTYIILLLVIGGALGAGYYFKVVKKKEDK ELESLEEEDDDFFSEAESEEEIGEAEETEVYDEE >gi|290780639|gb|ADGP01000033.1| GENE 131 137598 - 139310 865 570 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 562 1 588 709 418 44.0 1e-116 MEHILVIAEKPSVAISIAKVIGATKKKDGYYEGNGYKVSWCVGHLIQMANPDAYDGKYAK WNISDLPIIPKQYKFEVAKATKKQFNILKKLMNDKEIDTVINACDAGREGESIFRLVYNE AKCKKKMQRLWISSMEDSAIKEGFSNLKNGEDYDKLFESAQARAIADWLVGMNISRLYSC LYKQNYSVGRVQTPTLYMIVKRDEEISNFKKEKYYTVELSMNGFTLSTDKIGDEITAEQL INLIGDNIEITDVIQKEKITKPDLPFDLTTLQRECNKYFGYSAKQTLDYAQSLYEKKLIT YPRTDSRCLTEDMIVSTVNNILGKNDFDTERIKTVFNSKNVTDHHAIIPTVSSLSEDLSS IPDSEAKVYRLISNKLHASVGYPLVENTTKIVAEFDGFEFTSSGRAIRDEGFSKYLKEYK SKKNEFIELPDVSIGDVLNIENKESKEKFTQPPKHFTEDTLLKSMEIAGNEALEKGVEVE RKGLGTPATRAGIIENLIYKGFVERDKKNLIATHKGISLVTIVSDTFKSAETTAKWEMEL ADIAKGKSSKEKFLKDIESEIQEAVLKYRK >gi|290780639|gb|ADGP01000033.1| GENE 132 139392 - 140915 706 507 aa, chain + ## HITS:1 COG:FN0830 KEGG:ns NR:ns ## COG: FN0830 COG2865 # Protein_GI_number: 19704165 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 1 505 1 514 522 760 78.0 0 MQLLDIKRMAHNILENQNIESSFIEYKKSANFKDKILKTACAFANNYMNNEIGLLFVGIE EVDDKETGEKAIPKRPIEGIKEAKLEGIENELKSLLANIHPKINYHIITDQIDDEYYIVV AVESGSNGPFQTSERAEKDKDIRLKAGRYIRVGRDSRLPNPTEEFELLKKFANFSFSSNL NDTATIDDLSYEYMKEYLLQTGAKKDIREMSKLDMAKSMGLVSESEYGGYRAKNFAVLMF ADTPNKFIPNAHVEIIREIDGTDKMESKKFDGPVWIQAKQVSKYFEDNIMASYTIREADK IEHKIVYNYPLTAFEELATNAILHKEYDTPEYVGIYIYKDRISFVNHNRPLPPVTIEALN RDRTFDRRQYLNKELKDMFFSLNLIESYGSGIRRAKDALLENGSPELKFYPDNEEDNYTN AVMGVNKEFLKEFNGSTTKETTKEKNSIQEQIVLLMKDNPSITAEQIANEIKEITADGVR YHIRNLKAHGVIKREGSTKSGKWIVLK >gi|290780639|gb|ADGP01000033.1| GENE 133 140999 - 149716 3665 2905 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1381 2690 2 1305 1315 605 30.0 1e-172 MRINDFHNILELVKQDILQSEAEYLKLLKVVGNNQRYDFRSQLSIYDKNPEAIACAKFDY WRERFNRTVMRGQKGIPILEDYGTFKKVDYIFDIGQTVSRNRDVNEVNLWKFDKENHQDV LKEMIKSEGYEESESTLENIFSLSRLYGDEKIDTLMNELRVADEDRISFTKFVRDSVSYA VASRFKLDYSIDYELLRENFQRLDSISLMSLGESVSDISGKIIDATIQKSKELELQKEVL RGKEAGYNKIKEELEEAEEYVLRRDDQGRNENERVLRNGEYRRDNRENQGEYAKQLGGRD GLHERIPESDLRSDEAGLSITERGAEPLRDVSRSIQGEEVDRTPDGYSETGDRIYENRET ETDGSLEDRGRKQPAVWGDDFSSQRNDHQGSSGNLKENTEAEIREAENASFSLPENSYGQ IRLMIPLTENDIDTVLINGGNHDGGRLPVIAEFSKEKTVEELGEYLKDTFKGGNGFYIDE REVSSWYSDKGIHLAYGTSAREDDTQVLNWNDAAKRINELLNSGEFATNVELLEALDYER DRISESLWYLSHDLSEEGKEQGYFELFERGGGFPEETKRLSEALKNPEYLKQIIKEYSRF LAGYKENRNVLRFHYHKVDSLYQKLQELELPRKEYSTNLAELPKVKPFITEDEVLESLSR GSGVDRGKERITKFFKENHTLQEKANFLKDEYGIGGHSHAVSGAMGSDEWHDAKGLKLQK NDCNDVFLTWTSVAKHIDELFSKNLYLEEKETENKSEIEEPQYYSKDDPENLMTYEMLER VPELYAQEDVALADKEVHAAYIIPFRSNWTWYMTEYDRESGDAFGLVLGIEPEWGYFNIE ELKELNAQRLILEDFPKTFRELKDSELKKQMDEEELQSVFNGELSFVEEELEAPEETEKV RRADTVQATLFDYLKDREEVELNEKEGNPLEDFAVKAGDTVYFHHEEYKVREISKNEITG RNDLWLDPVRSGNHQIPIVTFDDNEDLLEQVSLERPNFIVGDEIRYKDKDYTITRFDDME NNLKTVTVKDNTEYLGGMITGSDVIPYRLESDLERIFENLTYQSPEKTTEEIEIKKAEAH NFQIKEETLPDKLSPSERLNNNLEAISMLNRIERGERDLDITAQEVLARYVGWGGLADVF DEEKGGQWKEARSFLKENLSQAEYEAARESTLTSFFTPKTVIDGVYKTLSDMGFKQGNIL EPSMGIGNFIGNIPDEMNKSKFYGVELDSVSGRIGKLLYPESDIQIKGLEETSFSNNFFD AIIGNVPFGEYKVNDREYNKNNFLIHDYFFAKSIDKVRNGGIIAFITSSGTMDKKDESVR RYLAARAEFLGAIRLPNDTFKGVAGTEVTSDIIFLKKRDSIRERDEDWIHLAEDENGLLY NKYFVDHPEQVLGSMEEISGRFGNTIACLPKENTDLKELLTKASEEIAKNANYEEIELLD DEISTIPATDDVKNFSYTIIDDEVYYRENSLFVKKEVTDKNKEKIKDYLELNAALKDVIS KQKEDFSDAEVKKAQEKLNEIYDSFSKKHGYVNNLSNTRALKEDSNFPLVSSIEILDEEE NFKAKGDIFSKRTITKAKVIDHVDTSLEALVLSVSEKGYVDFEYMGSLTDKDRPTLIEEL RGEIYLNIREEQNFYRPLSFNLEDGDLPFACANGSNSYKYGYVTKDEYLSGNIRDKIAIV DSYLAKLRQTERELPHLGYAENGKEKELISYEMNRLEYQKAELTKVLPKELEASEINVRL GATWIPIKDIEKFIFETLKTPGYAKWDIKVKFSNLTSEWNVEGKSRDRGNDLAEMTYGTA RVNAYKLIEDALNLKETKVFDQIVNPDGSKTSVLNKKETLLAGQKQELIKEEFKNWIFSD QERRNRLVKLYNERFNSIRNREYDGSKLSFEGMTTEIDLRSHQRNAIARSLYGGNTLLAH VVGSGKTFEMVVSAMESKRLGMCSKSLFVVPNHLTGQIGREFMQLYPSANIMVADKKDFE PKNRKRFIGRIATGEYDAVVIGHTQFEKIPMSKEYQEKHIQDQIDEIINYVEEYKHDRNQ NFTVKQLEKTKKKLETRLEKLNDDFKKDDVITFEELGVDKLFIDEAHNYKNLYLYTKMRN VAGIGQSEAFKSSDMFMKCRYMDEMTGGKGIVFATGTPVSNSMTELYTMQRYLQYESLKK NNLEHFDSWASTFGETQSAFELSPEGTGYRVKTRFSKFYNLPELMSMFKEVADIQTADML NLPTPEAHYEVIKTLPSEEQKEILKSLSERADDVRNRVVEPDEDNMLKITNDGKKLALDQ RLINPLLPDNPDSKVNVCVKNVFAIWDKTKENKSTQLLFSDMSTPKGDGEFNIYDDIREK LVAMGIPKEEIAFIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHD LDVPWRPADLEQRAGRIVRQGNENKEVSIYRYVTENTFDAYLWQTIENKQKFISQIMTSK TPVRVAEDVDESSLNYAEIKALATGDPKIKEKMDLDNEVTKLKMLEANYKSNRYRLEDKV AKNYPEEISRTEKLIEAVKKDISEVEPKAEGEEKFTSITILGEKFTDKKLAGEKLLEAIS KVKINESKVIGKYRNMDLEVSYNFFTNEHNFSLNGAAKHSGELGTSADGNITRLDNALEK MPEKLKRLEEKLFSTKEQLENAKEELQKPFEKADELKDKVLRLAELNKLLDMGEVEEKRN DNPLAEDVKRAIIDFCNREYEENHSYDEFDVLYPDLKHIGIAYTDTPDERHGIQFELDLE NYTATQYVNDVVVSHYDYVKENGSVEKALDVIKFEMENGEFNTFVSVDEEELKQAMGLKI DDEGNFYDPLSKDLDNDGIADRYDNDFKDSDYFESTYDVEDNLHTKEEATQKTGDKPSIL GQIRAYQEESKTEEKQTAKEQEYVR >gi|290780639|gb|ADGP01000033.1| GENE 134 149759 - 150418 662 219 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_1220 NR:ns ## KEGG: HMPREF0868_1220 # Name: not_defined # Def: single-strand binding family protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 201 1 201 219 321 97.0 1e-86 MDYKTMRNQIEDMVSDNHKDFVKAVISMEKGINDESALDKLYEAYMDNDTVNLLHEEFDY MIEDLREQGQIKDLPYVQEEKDNLVNIVGNIVGKIDVVERENKNGEAFKVVNFSVASKDD EGNKVYHNCSAYGEKGDIPKDFKQGDFVKLFGQIRTSVDDNGKEHTNIRILSSKLLKAKE QMKGRDEKKESVLGAIKKYQAEDKEKPKEKKETSKEAER >gi|290780639|gb|ADGP01000033.1| GENE 135 150423 - 150515 83 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVGVVLGLHRLFFLFAKKGDKDYLSISLPI >gi|290780639|gb|ADGP01000033.1| GENE 136 150488 - 151819 556 443 aa, chain - ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 1 251 1 265 402 71 29.0 3e-12 MAITKIHPIKSTLNLAIDYIVNGDKTDEQLLVSTHKCHESTAHTQFLRTRNAAGTKGTVL ARHLIQSFLPGETSPELAHQIGMELCKKILKDEYEFVLSTHVDKGHIHNHIIFNNVNMVT GRCYQSNKKSYHQIRYQSDKLCKENNLSVIDEFYERYKKKYKTNGKSWYENEQAKHGASW KSKLQFDIDRIIKQSKDWDEFLKKMADLGYEIKYGKHIAFKPKDKARFTRTKTIGEDYTE EKLKERIAEREFIKTPDVKKRIGNVIDINTNAKVKESKGYEYWATKHNLHTMAESVIYIR EHGIKSVKQLDEYIQKAADERQNLQEKIKAIDKEMQKLSTTMEQVHTVKKYRACYKEYTS NPSDKAFFEEYKAQISLYENALSELKKSYSKLPNSKDILAELDKLQEKKNTLMQEYSSSK STMDELYKIRKNYGIYMGKEMER >gi|290780639|gb|ADGP01000033.1| GENE 137 151822 - 152178 249 118 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1195 NR:ns ## KEGG: HMPREF0868_1195 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 118 1 118 118 189 99.0 4e-47 MANRIRNERLEIKLTEEEKALFEEKKRLAKCRNMSHFIRKCVLEKEIYQVDLEPFRDLQG LLSNATNNINQIAKRVNSTGVIYKEDISDIKKEIEHFSKELWQIHSLLLKRTSETEGE >gi|290780639|gb|ADGP01000033.1| GENE 138 152499 - 153122 376 207 aa, chain + ## HITS:1 COG:CAC0821 KEGG:ns NR:ns ## COG: CAC0821 COG1309 # Protein_GI_number: 15894108 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 8 204 6 195 200 64 27.0 1e-10 MADLNGYELTHKKIMDSGKANFLKDGYERANLRKICKDAGVTTGAFYRHFNDKEDLFISL VDPLAKELLGFYNKFEEESFQNIEKNCGEDLSKINIEGSIESALYMFSKKDLFNLLIYKS YGTKYDNYIELLVEKEDINRHKAFHIISKKKNIKSEVPKNAMHLLNHAYINALCEIIIHS QTEEEVKLNTRIVSKFFYDGREKLRGF >gi|290780639|gb|ADGP01000033.1| GENE 139 153216 - 154961 202 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 336 557 279 507 563 82 26 1e-14 MKQKSPATILWELAKKEHSKLKTSVFIASIGVIAGIVPYIAASRILVELLKGNEDFKIYS LWLGIGLLSYILKSFLYSMALSVSHKATFSVLKDVRLRMLEKLPKMPLGEIISVPSGNFK QIMVDQVESMEKPLAHLLPEMTSNLLGSLSIFIYLLFLDWRMALLSLVSIPVGMLFMGLV MKNYAVQYEGSVKVNREMNSAIVEYVNGIEVIKTFNQDKRSYAKYKDKVIANARYFYEWM KSCQLPVSLSKNISPTTMITVLPFGWYFYISGSLSAEVFISVIILSLGIAGPLLETINFV DGLAKIGTIANSINSILEGKEQKHSDREVSIQQYNIDLQNVKFGYEEEKEILHGISLNIK GGTTVAFVGPSGSGKSTLAKLIAGYWDITEGNINIGGYNLKEIPLKQLYSLTAFVSQDNF LFNESIRENIRMGNPSASDKEVEDIAKKSGCHDFIMKMEHGYDTVVGSSGSHVSGGEKQR ISIARAMLKNAPIVILDEATSYIDPENEVIIKQALSKLIKDKTVIIIAHRLSTITDTEQI FLIENGELVSYGKHDELLEGCELYRNMWNAHIGTKDGGMKC >gi|290780639|gb|ADGP01000033.1| GENE 140 155912 - 156688 211 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 15 235 2 226 245 85 26 1e-15 MDIDGKDIKPTTFDISFDNVEFSYSGKKILDDISVKIPQNQMTAIVGPSGAGKTTFCNLI ARFWDVEKGEISIGRHDIKEYSLESLMRQISMVFQNVYLFQDTIENNIKFAKPDATHEEV IEAAKKACCHEFIMKLPEQYETVIGEGGASLSGGERQRISIARAMIKNAPIIIFDEATAN VDPENEDKLQVAMEELTRNKTVIMIAHRLKTIKNANQILVLANGKINQKGTHEELIQAEG IYKNFVEARQKAVNWKLS >gi|290780639|gb|ADGP01000033.1| GENE 141 156769 - 157350 594 193 aa, chain + ## HITS:1 COG:no KEGG:CKR_1408 NR:ns ## KEGG: CKR_1408 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 79 193 1 115 115 170 76.0 3e-41 MKKGLSAKDLINVGIYTAIYLVLFFVIGMMNAIPILYPAIYLLIPIVTGIPFMLFLTKVE KFGMVTIMSIIIGVFWYFMGYTWLALVGYIPFGIISDLVMKSGGFKSFKKNVIGFWLFSC GMIGCQMPMWVMADTYMEGVKQQMGEQYALALAKYMPSWMGIAAFGIIFIGSVIGANLGR KMLKKHFERAGII >gi|290780639|gb|ADGP01000033.1| GENE 142 157350 - 158084 177 244 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 99 230 7 133 147 77 35.0 2e-14 MEEYEVYKPNKPKGFFLDPRTKILFMIFITTIMSVGYKDILVSLISAIVAIALLLSNKQV KIAFIYGGLFTLAIMAHFTKDMYTLPTLINTISVLLNALILRLFPIFMLGYYVVMSTKTS EFIAAMVKWKIPNAFIIPTAVAFRFIPTLKEEHNSIKTAMKMRGISFKNKKAWKNPSLYL EYVTIPLIVSIAKIGDELSAAAISRGLGALKKRTTVVKVKFTIYDLLILLFSIAFTGLFL YRRG >gi|290780639|gb|ADGP01000033.1| GENE 143 158087 - 159562 982 491 aa, chain + ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 456 1 457 464 310 36.0 4e-84 MIEFKDVSFTYDSGNKNAGIYNINLNINAGEVVVFCGESGCGKTTISRLINGLIPGYYSG NLTGSVIVNEHEISKNSINELSQYVGSVFQNPRTQFFNVDSTSEIAFACENFGIPREEIC KRIGKVTKELNIKNLLDKSLFSISGGEKQKIACASAAAMEPEIYVLDEPSSNLDIKTIKM LKDIIKKWKEKKSTVVIAEHRLQYLIDIADRFIYMKDGKINKEFSCVEFKELSNSTLNDM GLRSIHTIDTNSRMKNIESKEQIEIKDFMFSYGKKPFLEIHDAVLPQKSIVAVLGNNGSG KSTFSKCLCGVEEKAKGTLKIETKNYDTKERLKKCFMVMQDVNHQLFTESVKEEILLSIE NDENKEEKVDEICKKLNLMDFIDCHPMSLSGGQKQRVAIASAIASDRTILILDEPTSGLD FKNMKEVSNEMMRLKEDGKTIFIITHDPELVECCCDYFMFMENGKLKWHGGKNEKNIKAI KEFFNQTNNCL >gi|290780639|gb|ADGP01000033.1| GENE 144 159594 - 160319 304 241 aa, chain + ## HITS:1 COG:lin2873 KEGG:ns NR:ns ## COG: lin2873 COG0534 # Protein_GI_number: 16801933 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 17 218 16 216 450 120 34.0 3e-27 MKQDMKEQLLTKRPIDLLFQLSIPAVIGMIVIGLYPLMDGIFAGNIIGQTAMTACGVAMP LTFFNSGVSTLLGVGSASVLSRAIGKGDQNTVDKIMGNLIFWVILFSAIITVGGILLAPH FLDMVGATGEIKAYGIRYLRVIFIGSLFVNFTQSANMVMRGEGLMKKAMMIMGLGALLNI ILDPILMTVMGEYAIEGAALATITAQFVQAVVTLHYFLKKSKVVKIHKIKSDEKIKKKCL E >gi|290780639|gb|ADGP01000033.1| GENE 145 160331 - 160945 364 204 aa, chain + ## HITS:1 COG:CAC3295 KEGG:ns NR:ns ## COG: CAC3295 COG0534 # Protein_GI_number: 15896540 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 9 190 259 440 461 94 27.0 1e-19 MMMQLLFMIQQTMLYKMAFKYGGDPNGILMAASLRVYAFSFIPLWGMSQGLQPVVGTNFG AKQYDRVRQAMKVFSIGGLVLAAVFWIPSLLLSSQILSLFGVEASIITQGVGNFRLFYSV FILYGVMVMSITFFQSIGNGKKAGIIVMLRQLFLFVPAMILLPMVFGVKAVWFTQPLVDF IMIVVGIFMMLGELNKMSKEKVQV >gi|290780639|gb|ADGP01000033.1| GENE 146 161261 - 161677 460 138 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_1185 NR:ns ## KEGG: HMPREF0868_1185 # Name: not_defined # Def: sigma-70, region 4 # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 138 1 138 138 204 99.0 1e-51 MAKEYYLYVRGQKVKVSEDIYKVYWREKEHEKYLEQVDKKNHLLFFSSLDHDGNFVDNLA DESVDVEKIIETQILIETVRKAVSRLNDEERDIIERLYFNDETLSSVARSKKVSYQAIQW RKNNILKKLKVLLKEFIK >gi|290780639|gb|ADGP01000033.1| GENE 147 162060 - 162128 71 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLPSTYQCRKTYKYIIENDSK >gi|290780639|gb|ADGP01000033.1| GENE 148 162170 - 162367 220 65 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0076 NR:ns ## KEGG: EUBREC_0076 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 61 7 64 70 70 63.0 2e-11 MKNKVNAKRFVRYKEGAELYSMCQTKFEEIAKEAGAVYKLNKLVLVNCDILDDYLETFRM MPYQT >gi|290780639|gb|ADGP01000033.1| GENE 149 162449 - 162625 256 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969280|ref|ZP_06560805.1| ## NR: gi|290969280|ref|ZP_06560805.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] # 1 58 1 58 58 101 100.0 1e-20 MRKMGRPLVEDPMIHRVTIRMTEGEYQELRGYAKSHNLTMSQAVKSGLGKLYADSLKK >gi|290780639|gb|ADGP01000033.1| GENE 150 163799 - 163906 59 35 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969281|ref|ZP_06560806.1| ## NR: gi|290969281|ref|ZP_06560806.1| site-specific recombinase, phage integrase family [Megasphaera genomosp. type_1 str. 28L] site-specific recombinase, phage integrase family [Megasphaera genomosp. type_1 str. 28L] # 1 35 377 411 411 69 100.0 7e-11 MGHASIETTMDIYAEVNSDKKKESIEKLTKNLDVF >gi|290780639|gb|ADGP01000033.1| GENE 151 164422 - 165687 1520 421 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1516 NR:ns ## KEGG: Vpar_1516 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 281 409 345 472 473 72 34.0 3e-11 MTALTAGIVFAFAGSSAVTAESPLFTPAAIEENVSTATTTDAAEQPKDTTDTPAKPAKED AYARLERECREHPDTDKTAPTGPLGEKSKEILSILTPLTPVTAAQRQLLAQQDTLHVIPL IAADLNIQGIERGFSQAQVEERWGKPVRITKTDHFMTLHYGNDKESLRCVLRTEQETADG RLAYTPQVDAVFLAKGDTVSIGRNIFLHNPVELVLRRYGVPHNVLRDAAANVYYLVYEAG RTDLIFAVAERKVQRVALMEARYPYHREQALTGRQAREKRDFTLMGFGLDEPFIANRYNM WNNQLKRGTDTFWLYNNYGVAVDGKNKVKRVFLLTNSGYTDRGATLGYHVSTVLGLYGYP DHVDHTGTDPKGVDVYYYSSPYQPGVYLAFVIKRDTQYVDDVILTEGPLHDVQNPTARYG L >gi|290780639|gb|ADGP01000033.1| GENE 152 165778 - 166245 582 155 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1515 NR:ns ## KEGG: Vpar_1515 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 154 1 154 154 169 50.0 3e-41 MVTDAEVLKRWKYVAQEEEKILILIGGPGSGKSKVIRDLSEQDGWKICEARQLFDDEFLA IPRADRPERAVALIATALERLHAKVVMIDNVEFLFAPILNLNPVHMLLELSKKFPIIVSW RGTLDGNTLYFEHNGEPKYAKFTVADTNHVISMDA >gi|290780639|gb|ADGP01000033.1| GENE 153 166714 - 170007 2918 1097 aa, chain + ## HITS:1 COG:no KEGG:Acfer_2039 NR:ns ## KEGG: Acfer_2039 # Name: not_defined # Def: YadA domain protein # Organism: A.fermentans # Pathway: not_defined # 926 1092 2831 2997 3008 82 34.0 1e-13 MNKTYHVIYSKVKKTYIVVSELVRGAYGYKTTKKTILKASVGTVLALVSMGVYCQAAQPV VEHGRNAAISVENRKQAGEVREPVEVYDVQEGIRGDSPSIGNHAHTSPRLHPYGVAIGYD SKAIAHMGVSLGYDAENYEEGSVALGALSWGEASKSRTKDPFLVDAKGEDFDLQFKNFKQ EDMPDKAQIDLYRAMNNSAVYVGHERRDSDDDFPVFRRRIVGVACGADDYDAANIKQLRV LNDKLNSYIQAHSDAVEPSGSTAGPILEHVLNAQGNYQTIALKDVKSLSFAQNDIENKVY PSLDNDGNVTFIMNQSYSDDMLRKVLDGIIGVRAVVHGEGIAIGTQSCVMNTGGIAVGRD SVSRNGGISIGFKAKSQGKRATSIGMGAHTESDYDVAIGYHSSDKKYKDAAPFLKEKDTT HYAVLAVGAGQESDDSKVALRRIIHVAPGANDDEAVTVGQLKALQRSISSTTGGTSWTWK GVRKEGKSQDVQGSAIKSIQLFYKNKDKNEPVTVQQDEQGNVQVLLEQKERTGQTADMNG FLYTLDTIRIGTHTDKDSLPSGKNSMAVGYKSFSESENGVALGAETQVHEVDSVALGSGS IAQPNDDTAKPAYLTGDDEKEFYENQYKAHPDLDWPNSNNKEKYRLLDTSGIYVGHIKTD EFDPFPEFHRRIHGVASGSEDYDAVNIKQLKVVNNRIDTLKNIENWQIKNVSVDSKNEAV DAKNVKTISFVYQQAQKTLPVAVSLDKDGNLTVAIEKNTSTILPQGDKGLPGEKGPQGDK GLPGEKGPQGDKGLPGEKGPQGDKGLPGEKGPQGDAGGIIQVAMIANDTTPASSIVGSAQ ELDLDNSLEQGVSLQAQKADNGKVRIHASLNDVVQVGGKHGTAIVLDGDKGALRFTRRKQ ERDSSTAAVTVAQISGTVGADGVSGLNMHQARLQQVADGAAPQDAATMGQLQRVQVHMAD QVGATKTHADKGIAGAAALAALHAQSFDPQNKLDIAVGVGSYAGKQAVAMGMFYHPNDNA TVSVGGTFGNDQSVVNAGVSFRIGSGKLLNDRSKTALLRIIQQQEKRIAQLESENKQRDA QWVRLVQEMEQLKTRMQ >gi|290780639|gb|ADGP01000033.1| GENE 154 170281 - 171699 980 472 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969285|ref|ZP_06560810.1| ## NR: gi|290969285|ref|ZP_06560810.1| outer membrane autotransporter barrel domain protein [Megasphaera genomosp. type_1 str. 28L] outer membrane autotransporter barrel domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 472 1 472 472 943 100.0 0 MKKAVWWLSVLTVMMTGTVTANDLYAYRYVHPDGTIVNVTDAGYTKVGNVTVAGKTYWGA FSAVPKSQDTSIIKVATNIPLPKHGNFTVTKRMPDPEYPGGRIMEMEEEIPRSLYGWEKS PHIWGTIDGTAFSIPKTPGTMVLLNNAIHIEPTDRDTNVDLAKTCLRNGEAHGKVAAVTE SAAWWTHYTSAHIQHVRVVGTRRLLWERDAAGKWKTAVKHTMFEKETQLRVWTIGHNRMG RDKSVNSMYFFYGQEAGRYFRTSVLDERIRMITNPNGFHVANAKTDMFGAGFRKTKPFAH GLYGEVLGQYAVFDRQIHTVNDGVYGSQKASVQGSDVGLSVEAGRHIAVMSHVFLQPEVQ YTYHLYDQHAYTDSLQRKFGRIYRHEEDIRVGLQVAYKGIYAKVNRYFSWYNQYRLPATT EYEVGVARHFHQNGELGAAVSSRTQVLWRSRKSGKTYKKRQQTYRFWAQFHF >gi|290780639|gb|ADGP01000033.1| GENE 155 171751 - 173154 976 467 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969286|ref|ZP_06560811.1| ## NR: gi|290969286|ref|ZP_06560811.1| outer membrane autotransporter barrel domain protein [Megasphaera genomosp. type_1 str. 28L] outer membrane autotransporter barrel domain protein [Megasphaera genomosp. type_1 str. 28L] # 1 467 1 467 467 925 100.0 0 MKKILYSVLVAACLFMTEVAVANDLNTYRYIHPDGTVHELTDTDDYTEVGRETIEGKEYW VAVMFRPQDEYTDIYKLKTNVPLDNKSDMGRFILRNRTKDPKDGTDVTEWEKPIPRKVSG GWVGSPFVTWSIHGKTYRIGDDKGRFTLLNNTVHILPSDPDTGLDLAKAGIMSLERRNVA AAEKEKKSSWWTTYTTNRIHRKYFSIYKSPTSKVDKDGKWKIGKARMVAFKNSYSQILGV GRNIIGQDGSLTGMYFFYGQEEAQYLRDRIVDKNINVIRNKAGFHVANGSTKMFGGGLSK TTYFSHGLYVDALCQYAVFGRDIHTVNDGVYRSQKASVRADDIGLSLEVGRKIQMRNHWS MQPEVQYTYHHYVQDPYTDSLQRKIARADIRDREFRVGMKVMYRDIYVKFNKYFNYTDRK KIDTETAIGIDRERKNNYSIHSSVTYRTGVQREEERVRLNISVKKYL >gi|290780639|gb|ADGP01000033.1| GENE 156 173342 - 174775 1674 477 aa, chain + ## HITS:1 COG:CAC1531 KEGG:ns NR:ns ## COG: CAC1531 COG2461 # Protein_GI_number: 15894809 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 86 467 4 392 405 228 33.0 2e-59 MKKTLDLKKSVYELIQEYPEVVQILSSVGFSEVENKVAQHTVAKVMTIPQGAAIKHIALG HVIRAFRKAGFAIEGREAVGFAGPEVAKNREERKAELKKMLLQLHDGIPLEQVRQAFIRS FSHVEAAEIMVAEQELIQEGTPIEEVQKLCDLHSALFHDAAGQRVQNPEEVEQMLRNAYE ETGHPLRTFKRENDVLRQAIVAVKEDLEKGTDAGDSLGKMSDLAIHYAKKGDLLYPLLAQ KYGVTGPSKVMWTVDDEIRRDVRLLQRREFHEEIWREEVKTLVQRAEEMIYKEEHILFPI CVRTFTQADWVQIYKDGEEYDPAFSLPAEVWAAATAGKAAVLPEGWEDGKIVMPGGSFTV RQLTAVLNTMPVEITFVDEEDVNRFFNEGPKVFKRPMAAIGRDVYSCHPPKIEAMVRMII SEFKAGRRDKVERWAERKGKPLFVTYFAVRDRDGKYLGTLETVQDMQFAKDHFAGRS >gi|290780639|gb|ADGP01000033.1| GENE 157 174910 - 175884 908 324 aa, chain + ## HITS:1 COG:BH0544 KEGG:ns NR:ns ## COG: BH0544 COG0611 # Protein_GI_number: 15613107 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Bacillus halodurans # 8 324 4 326 328 202 40.0 5e-52 MKISDVGEFGIIRMIQERLSVSPENVVVGIGDDGAVYRTTPGREQVAVIDTMVEGEHFII HRTATWHAVGYKAVAANLSDLAAMGAVPTQAVVSTALAPTMEVSEVLAMYDGMQDVCRTY GVNIIGGDTVMAKESAVITVTALGEVEAGRALLRSGAKAGDIVAVSHTLGDAGAGLDVLL SGTAGYESLVRAHQYPVPQIQLGRILAAHHGGCANDISDGIAGEANEIAKASHADLVLYA ESIPVSAALRQWCAQEKKDVFHYVLQGGEDYELIFTLPPETFSAVRRQFPNLTPIGRVCA GTGRVRWVQDGKESIVPPHGWTHF >gi|290780639|gb|ADGP01000033.1| GENE 158 175895 - 176362 518 155 aa, chain + ## HITS:1 COG:BH0545 KEGG:ns NR:ns ## COG: BH0545 COG0802 # Protein_GI_number: 15613108 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Bacillus halodurans # 4 151 6 152 157 117 43.0 1e-26 MTDIITRSEAETVALGERLGAVLRDGNVLALHGDLGAGKTHFVQGIARGMGITEPVVSPT FTILNYYEHEIPLQHFDFYRLEEASELAALGFDEYVQHGVTVIEWSEKFPECIPHTAAHV YIDNPGLCERKFHFVWQGSQWEAVEKEVKNYAIGH >gi|290780639|gb|ADGP01000033.1| GENE 159 176346 - 177047 164 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 42 230 2 188 380 67 26 5e-29 MQLAIETSGLVSSVALLHEGVLRSELTIQARLTHSEQLMPHIADMLVKAGVTKQQIDSVS VSIGPGSFTGLRIGLATAKGLAFAWRVPLVGIETPVGLAWNFVGVGDLICPLIDAQKGNV YVSLYRWRRDTLEVVQDTYIAPVTDVLRSLRQRGEPTVFCGDGLRLAMPYLAADPLFRIA PATMAIPRAGSTALAAAQRLENNDTDDCMRLTPAYKRRSEAEVLWEKRHGGKA >gi|290780639|gb|ADGP01000033.1| GENE 160 177044 - 177505 210 153 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229257752|ref|ZP_04381663.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Acidimicrobium ferrooxidans DSM 10331] # 1 142 1 140 166 85 38 2e-15 MIVRKAQKTDASGIFAVEREAFSVPWSQAAIQRELQNTALTMYYVLVTDRGDIAGYAGLW HVADEGQITNVAVLPAFRGKGYGELLLRVLMEAAWRVGCASIFLEVRVSNLSAQQLYRKL GYAAVSVRRAYYSQPTEDACVMECKKERYCWSI >gi|290780639|gb|ADGP01000033.1| GENE 161 177524 - 178549 1273 341 aa, chain + ## HITS:1 COG:CAC0901 KEGG:ns NR:ns ## COG: CAC0901 COG0533 # Protein_GI_number: 15894188 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Metal-dependent proteases with possible chaperone activity # Organism: Clostridium acetobutylicum # 4 334 8 338 340 386 56.0 1e-107 MYTLALETSCDETSAAVIRDGRHICSNIISTQVPIHRKFGGVVPEIASRQHIEYVLPIIR EALTVAGCELEDMDHIGVTYGPGLVGALLVGVAAAKAISFAVNKPLVGVNHMEGHIFANF LSHPELEPPFLCLVVSGGHTQLVQVQDYNAFVLLGQTRDDAAGEAFDKIARVMGYPYPGG PQIDSLAKQGNAEAIVFPKALHEKHNFEFSFSGLKSAVLNYLHTLEQRGQTYVAADVAAC FQKTVVETLVEKTMDAAQYSGAVKIAVAGGVSANSCLAAAMERACMEKGYTFYRPQPVLC TDNGAMIGCRAYYMARAGLFSDLTLNAKPNLAIASAAGNET >gi|290780639|gb|ADGP01000033.1| GENE 162 178571 - 180016 1341 481 aa, chain + ## HITS:1 COG:ML0803 KEGG:ns NR:ns ## COG: ML0803 COG3920 # Protein_GI_number: 15827350 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 166 465 179 489 500 159 34.0 8e-39 MNTSILEICRRYSSLSEVQIHILQHSEEILQFASDLSRREIQLFVPGKKPQSLVSVAWRT PFSRQSSMAEGVRVGCEIAAYEEPAVWQVLQQGRPLHAGREVQYGKIESLAAYPFADNAG SCIAAVVFFGNVEVSRESLTETAYWALQVPQEIAARDLYRPLTVQEGVVVVDGNGVITYA DEMAVGILHLRGHIGGLQGFNIYNAQRDFIGAKRALATAKGYMDEVLFQGAVFTRRVLPL LQHGKVQQIVSLLAERTELHHKEAELLVKTSVIKEIHHRVKNNLQTIAGLLRMQSRRAHN EETKMALNESVQRILSISFIHEILARQDAETVDVAAAAQQLLTLAVRSMAAPERRIETVF RGESLYLSSGRATSVALILNELITNALVHGFGKERSGTLSVSVQAKGEQVEVSVTDTGCG MPPGSDRENPAHLGLEIVRTLIETDLHGQWRIAANMPQGTRVTVRFLRQKEDRDGISHGH C >gi|290780639|gb|ADGP01000033.1| GENE 163 179991 - 180572 684 193 aa, chain + ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 4 192 18 206 208 147 42.0 1e-35 MAYRMVIADDEAIIRMDLREMLEEYGHEVVGMADNGETAWQLVRQEKPDVVLLDIKMPTL DGIQAARRIGHEHLAPVLLLTAYSQQEMVAKAKSSGVFGYVVKPVSPQRLFPAIEIAVAQ FSRQEESYRQMAAMRERIETRKQVERAKAVMAAQFHLPEAEAYRRLQQYSMKHGRSLREV AAAVIKQAGEKKK >gi|290780639|gb|ADGP01000033.1| GENE 164 180700 - 180981 439 93 aa, chain + ## HITS:1 COG:BS_groES KEGG:ns NR:ns ## COG: BS_groES COG0234 # Protein_GI_number: 16077669 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Bacillus subtilis # 1 92 15 106 108 121 68.0 3e-28 MLKPLGDRVIIRVLEQEEKTAGGIYLPDTAKEKPSRGEVVAAGPGKMTDDGKRVALDVKA GDTVIFSKYAGTEVKFEGTDYLIVSERDILAVC >gi|290780639|gb|ADGP01000033.1| GENE 165 181020 - 182651 1618 543 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 543 3 547 547 627 60 1e-179 MAKQILFNEEARRALGKGVDALANAVKVTLGPKGRNVVLDKKFGAPTITNDGVTIARDIE LEDAFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAMIQEGMRNVAAGANPMILKRGIE KAVTTLVDEIQRRAIPVADKAAIAQVASISAGDEEVGGLIADAMEKVGKDGVITVEESKT MGTQLSVVEGMQFDRGYISPYMVTDTDKMEAVMSEPYVLITDRKIASIQEMLPVLEKVVQ AGKELLIIAEDVEGEALATLVVNKLRGTFKAVAVKAPGFGDRRKAMLQDIAILTGATVIT EDVGRKLDSVTMEDLGTARQIRVTKDETTIVEGHGNQEEIKNRVAQIRAQIADTTSDFDK EKLQERLAKMSGGVAVIEVGAATEVELKDKKLRLEDALNATRAAVEEGIVAGGGTTFIHI LPVLDQLKEEGDVQTGINLVKRAVEEPVRQIAANAGLEGSVIVAKVKASAAGVGFNALTE EYVDMVKSGIVDPAKVTRSALQNAASIAALVLTTETLVADKPEANAPAAPAMPAGMGGMP GMM >gi|290780639|gb|ADGP01000033.1| GENE 166 182817 - 183023 269 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371063|ref|ZP_03854547.1| LSU ribosomal protein L31P [Veillonella parvula DSM 2008] # 1 65 1 65 65 108 72 2e-22 MKENIHPKYDTVKVTCACGNTFETRSTASELRVEICSKCHPFFTGQQRAQQARGRIEQFN KRYGKKAK >gi|290780639|gb|ADGP01000033.1| GENE 167 183098 - 183979 829 293 aa, chain + ## HITS:1 COG:FN1092 KEGG:ns NR:ns ## COG: FN1092 COG3872 # Protein_GI_number: 19704427 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Fusobacterium nucleatum # 1 292 3 298 304 235 44.0 7e-62 MEKPRAYVGGQAVIEGVMMRGPQKVATAVRLPDGKITVQCEPVHSLTERFPFLKKPFIRG SVALYESLLYGMRSLSFSAKAAEEEENVSDVQMGLTLTVSVVMAIVFFILLPTYGAHFLL SATAASVHLNLAEGGLRLLIFLLYIWGISFTDGMYRVFQYHGAEHKTIWTYEAGEPLTVE NVKKHSRLHPRCGTNFLLIVMVVSIFVFAFLGWPGIVFRVLSRIIFMPVVAGISYEIIRL AADSSHTCIRTAVRPGLWLQYLTTREPQADQIEVAIAALEAAKPSTGQTAQNL >gi|290780639|gb|ADGP01000033.1| GENE 168 183997 - 185079 1528 360 aa, chain + ## HITS:1 COG:CAC2884 KEGG:ns NR:ns ## COG: CAC2884 COG0216 # Protein_GI_number: 15896138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Clostridium acetobutylicum # 3 355 2 352 359 395 56.0 1e-110 MFLDKVQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIR GDRELLDDPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGA GGDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYE SGVHRVQRVPVTEAGGRIHTSTATVAVLPEADDVEIDLDMKDVRVDYFRASGAGGQHINK TSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARLLDQAQQAAAQEVTEARRSQVG TGDRSERIRTYNYPQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARRAELMQAEEHE >gi|290780639|gb|ADGP01000033.1| GENE 169 185072 - 185944 296 290 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3] # 1 250 10 266 302 118 31 2e-25 MNKIWTIGSVLTWTQKFFQQKGIETPRLDAEILLAHVLGKERIYLYAHYEEPLNGEELAQ YRAFIQKRADAYAVAHITGVKAFFGSDFLVSPEVLIPRPETELLVEYVIHACKQRESLRI LDIGTGSGAILLSLLAHLPQAVGWGVDISRAALQIAEKNSIVQGLETRAVWRESDLCQQV QGERFSVIVSNPPYLTAADMAQLQPEIRREPETALFGGQDGLDIYRRLAVETVPLLEPGG LCAVEIGRGQEEAVQRLFTADGDYTLQDCVWDYGRILRHLVFKKERKNED >gi|290780639|gb|ADGP01000033.1| GENE 170 185889 - 186980 1226 363 aa, chain + ## HITS:1 COG:CAC2882 KEGG:ns NR:ns ## COG: CAC2882 COG0009 # Protein_GI_number: 15896136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Clostridium acetobutylicum # 16 357 1 344 350 285 41.0 1e-76 MAGFCGIWYLRKSEKMKTELLKITDIEQQQELLRQAGACIRQGGLVVFPTETVYGLGANG LDETACRRIFEAKGRPSDNPLILTVADRQGAEQISDRISPLAEKLMARFWPGPLTLVLPR RSCVPDVATGGLDTVAVRCPDHDICRAFLQYAQVPVAGPSANLSTRPSPTTAAEALHDMD GRVQMIIDGGACHIGVESTIVECTAADEVTILRPGGITPEMLAEVAAKVVLDTHLVSGKG VPKAPGMKYRHYAPEAPVQAFVGSEQAVIEAVQMAYTEAKAAGKTVGFLLSREVATQVGA PHTFIWGHHGDAAALANKLYTGLLFFDKERVDLILAEGVPAVGLGLAVMNRLKKAAGGHV QAV >gi|290780639|gb|ADGP01000033.1| GENE 171 187025 - 187465 671 146 aa, chain + ## HITS:1 COG:CAC2880 KEGG:ns NR:ns ## COG: CAC2880 COG0698 # Protein_GI_number: 15896134 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Clostridium acetobutylicum # 1 146 1 146 152 174 56.0 3e-44 MKLVIGADHGGFALKQIVVKYLQEEQWDVTDYGTLTGERCDYPDIARKVALAVAAGTFER GILICGTGIGIGIAANKVKGIRAALCNDLFSAEYCRRHNDANIVTMGGRIIGPGVAREVV RIFLQTPFEGGRHAARLEKIAMLEER >gi|290780639|gb|ADGP01000033.1| GENE 172 187481 - 188104 890 207 aa, chain + ## HITS:1 COG:BS_upp KEGG:ns NR:ns ## COG: BS_upp COG0035 # Protein_GI_number: 16080742 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Bacillus subtilis # 2 207 3 209 209 287 68.0 8e-78 MQVQVMDHPLIQHKITLMRKKETGAMDFRQLLEEITMLMGYEITRDLPLEEVAIETPLCA MTGKQISGKKLGIVPVLRAGLGMVQGMLNLIPMAKVGHIGLYRDPKTLEPVEYYCKLPDV TDRDFIIVDPMLATGGSASEAITLLKKKGIQHIKLMCLVAAPEGVKRVNADHPDVRIYVG ALDEKLNDRGYILPGLGDAGDRIFGTK >gi|290780639|gb|ADGP01000033.1| GENE 173 188273 - 189913 633 546 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 121 545 117 540 546 248 33 1e-64 MITITDRTQHKTYTVEEGISLETVVREQYATAQPRIAAALYNRDFVGLDTKVTADGEITW FSLGTVEGNSCLQRTAIMLLVRAVDDLYPGGKVFVKHALRKALYCELSIGHTVTVRDVKM IQQRMEEMVAQDEKLTQVITGTEMAMEMCRNRHMEREAELLQHLDIHHIMAYQCGRIFDY YMGPLLPSMGYITCFHVRSYAPGIILELPTPQSPEALPVYKEIPKMARLFLDAESWGRIV RCEYVSDLNRYIDDNTIQDIVDMAEALQEKKLAEIADYIVQQRPKIKVVLISGPSSAGKT TFCKRLTTQLRVVGLRPVKISLDDYFYNREDTPKNPDGSYDFESLRAIDVPLFNKQIDAL QQGKDVYLSRFDFVEGKRYFDTLPVHLEPQQPIVVEGLHALNDSLTYMLPRYEKVKISLG VLTQIRINDHNRISTSDTRIIRRMVRDRQFRDRDALATMDVWADVRRGEEVNIYPYQEDA DTIFNTALPYELSVLKPYAEPLLASIEKDSTHYAEAQRLLKFLKPFKSLPSQVVPGNSLL REFIGK >gi|290780639|gb|ADGP01000033.1| GENE 174 190151 - 191371 1516 406 aa, chain + ## HITS:1 COG:TM0356 KEGG:ns NR:ns ## COG: TM0356 COG1171 # Protein_GI_number: 15643124 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Thermotoga maritima # 6 405 2 399 401 389 57.0 1e-108 MSEERVTLQMIKDARQRLKGVAQQTGLSYTHSVSNSAGCQVFLKMENLQRTGSFKLRGAY NKVACLSPEERAKGVIAASAGNHAQGVALAAGEYGCQATICMPKHAPLAKVAATRGYGAN VVLHGDFFDEAAAKAVELMKERGYTFVHPFNDPEVIAGQGTIALEILEQLPETEVIVAPI GGGGLISGLAVAAKSLNPNIKVIGVQAQNMPSMLASREAGRIVTYDGKATLADGIAVKKP GELTYALCRHYVDDIVTVDETEIAGAILLLLERAKTVAEGAGAVPVAALMNGKISGIRNK KVVALVSGGNIDVNNMTRVINSGLIRSWRKLFFETVVPDKPGEMAKLLLLISRFNANIIS ITHARSQHGIGFGSTAVGLELETANESHVEHLVEKLKEEGYPVNIK >gi|290780639|gb|ADGP01000033.1| GENE 175 191394 - 192800 1700 468 aa, chain + ## HITS:1 COG:CAC0727 KEGG:ns NR:ns ## COG: CAC0727 COG1113 # Protein_GI_number: 15894014 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Clostridium acetobutylicum # 7 464 2 458 460 567 66.0 1e-161 MENTASEKNTMERGLKPRHVEMIALGGTIGVGLFMGSASTIQMAGPSVLLCYGLAGLVMF FIMRIMGEMLYTEPVTGSFAMYGHKYISPFAGYMTAWCYWFLWIAVALSEITAVGIYIHY WFPLVPQWISALGGMAIVTVANMVAVKLYGEFEFWFAIIKVITIIVMLIIGALVIVFGFG NHGVPVGISNLWTNGGFFPHGFSGMLGAMCVVAAAFQGVELVGITAGEAQKPQETLRKAT KNIVWRILIFYIGAIFIVLALYPWNQLGTLGSPFVTTFAKVGITSAAGIINFVVLTAALS GCNSGIYSSGRMLYTLSENGLAPKFFGKLSRHGVPRHGISITIGCLLIGVILNYLIPNSK LFIYIYSASVFPGMVTWFVLAYSQKNFRKNWGEAVMSKHPFTSPLYPYANYFCILFLALV TVGMWFNPDTRMSLIAGWIFMAIITIVYFLAGYHKNQYDKEGKLIGKQ >gi|290780639|gb|ADGP01000033.1| GENE 176 193005 - 194567 1514 520 aa, chain - ## HITS:1 COG:CAC3213 KEGG:ns NR:ns ## COG: CAC3213 COG2244 # Protein_GI_number: 15896460 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 5 492 6 490 512 235 33.0 2e-61 MSNKFISGTLILTLSGFVVKAIGSINWVILSRILGGEGIGIYQMAFPIYLLALEISSAGI PIAISIITAEKAAKEDYAGAKRIFHVSISMLCTTAFILSLLVFFGSRFLISEHIIRESRA YWSLIALAPAIFFTTIIAGFRGYLQGWRQMTPTAVSQITEQIVRVIAMLGFASFFMPYGL QYAAGGASLGAGFGGLAALFVLLFFYRRLQKTLPTTTVSYPQENVWHILKRLVSLSIPIS MASIMLPIVSNLDLLIVPRRLEAAGFPTHKATELFGYLTGMSVPLVTLATILTIAMAMNL VPTISHYFTLGDKKEIYNRTAGALRVAFLVTIPFSVLLFVMAHPIVTFIYNAPAAAPATR TIAIAIFFLGMHQITTAILQGLKKPKIPVMNMMIAAAVKVCCNWFLVAIPAFGIRGAACA TVADIGVAALLNLIFIYRHTGYIIDLKIILRNALSAAVMGCIVACLYSFLHHHTPAVISL FVPCFTGLLIYLGIMTATGGVTQDDLSKIPFFKRFAKYAH >gi|290780639|gb|ADGP01000033.1| GENE 177 194960 - 195436 685 158 aa, chain + ## HITS:1 COG:MA0180 KEGG:ns NR:ns ## COG: MA0180 COG1846 # Protein_GI_number: 20089078 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 7 142 21 156 156 75 28.0 4e-14 MMDYFEIGHEFGIINRRTQAYVSGACRPWNVSYSEHVVLLTLYSHDGCTQVELGKLLTAD KALVARNVKLLEKKGLIFRRQDNEDLRYKYIYLTRKAWEMRPAMEAIVKRWVSFLLKGVE EKRLAEALDTMKIVSENAARAMVETIGTPGKGEGDEEE >gi|290780639|gb|ADGP01000033.1| GENE 178 195423 - 196514 1518 363 aa, chain + ## HITS:1 COG:AGpA549 KEGG:ns NR:ns ## COG: AGpA549 COG0845 # Protein_GI_number: 16119607 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 357 21 362 384 196 39.0 8e-50 MKRNKWLIGIGLLIAMSVLAGGCGKKISPPPEPQLVKTVTVGGTMDSDTKTTYAGTVRGR YESKLAFQVGGRITARYVQLGSRVQRGQVLMTLNPQDLQSAVQQTQAQVDAATAQVKLAQ ENYGRFQKLYQEEAVSAAALDQAKTAYRQAAAQYQQALAARQLQRNQLAYTQLTADAPGV ISFVNGDPGQVVAAGMPVLTLVHDGDWEVEIHVPENKVADFTVGKTVSVSFWALANAACR GMVREVAPMADPVTKTYTVRVSLWQPPAGMQLGMTAGVVNAAAPKVPQGTYRLPLAAIYQ TGHTPHVWVVTKNNRLQLQAVKILAFDDDAVQVGGLSAGAQVVTAGVNLLYEGEQVRTES EET >gi|290780639|gb|ADGP01000033.1| GENE 179 196511 - 199558 3298 1015 aa, chain + ## HITS:1 COG:RSc1654 KEGG:ns NR:ns ## COG: RSc1654 COG0841 # Protein_GI_number: 17546373 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Ralstonia solanacearum # 3 1009 7 1029 1039 874 45.0 0 MRNLSETALKNKVLVWYFIVLIAVAGVFSYMKLGRMEDPAYTVRQMVVTAAWPGATAEQM QKQVTDKLERQLQDTKGLDSLQSYSRPGQTVIFVSLQDSVPASQIRSTWHDVRNLTENMK RQLPDGVVGPFYNDRFDDVYGSIYALTGDGYSYEELRQKAENLRRVLLTVPDVGKVQLLG VQEEEIYISVANAKLAALGIPPTAIAQAVRGQNAMTPAGMIDTKSDNVYLRLSGRCNDLE DIRNIPISASGRTFRLGDIATVERTYTDPANPKMYFNGKPAVGLALSMKNGGNILTLGKN LQQFCQTVKADLPAGMVLHQVSDQPQVVKESIADFIGTLREAIIIVLLVSFLSLGLRTGL VVACCIPLVLAGVFCVMEVSGIDLHKVSLGALIIALGLLVDDAIIAVEMMSVQLERGKTR LEAACFAFRATAKPMLTGTLVTCAGFIPVAFADGAASEFCRSLFPVIFSALLLSWIVSVM VAPLFGYYLIKPKITQTRKPLYQSRFYRLFRQVLEKCLTYYRAVIAATVIAFVVSVGMLR WIPQEFFPPSLRPEIIVEMTLPEGSSLAATQQEAQRFSTYLRQHTKEMKSYSYYVGEGAP RFVLTWEPVLPASNYAQFIIVADDLQSRASLMKSIQREMKDHFPTVRSNVKNISLGPPSS YPLMIRVSGYNADRVKLYAERMAAKIRQNPDTADVFLNWEQKSKVLRVETDQAKLRSLGI SDQDVAKTLYTELSGASIAQYYAPDKTIGIQMRLQAQDRNSLAAVQSIPVYTAGGYVPLG QLAKISYGAEDTLIWRRNLKPTITIQGNIRNGTANDVTAEAYQSIQGIRNALPFGYDVEV GGDLENSRKSLYYLLRPVPIMIILIITLLMLQLRSVADMLLTLVTAPMGMIGVSAGMLIS GKPLGFVAYLGILALSGMIIRNSVILIDQIKKHIAGGEDPWNAVIDSAILRFRPIMLTAA AAILGMIPLMRSIFWGPMAVTISAGLLAATVLTLLVLPAMYVAWYHIRRPSYKEE >gi|290780639|gb|ADGP01000033.1| GENE 180 199660 - 201207 1202 515 aa, chain + ## HITS:1 COG:TM0116 KEGG:ns NR:ns ## COG: TM0116 COG1070 # Protein_GI_number: 15642891 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 5 502 4 488 492 154 26.0 4e-37 MDSYYVVFDAGTQSVKVAVYSFAGKCVAAATEKTSLQYPRPGWVEMDIDEYYRSVKKCMR ICSDRMRADGLSTAAVAAIMGDGIICGIAGINEEGKPVTPYINYLDSRTAADVARLKAEN RSIWARETGNAEPNVMFPAMIARWFLAHTEFVKTGVKFIHNCPYILLHLAGLRGTEAFID WGTLSGWGLGYKVAAKEWSPAQLQILGIDRTYLPRIVKPWEHIGRLCAADAAETGFPEGI PICAGAGDTMQSMLGSGVWKAGQAADVAGTCAMFCVAVPGIIPALSQRGSGFVFNAGTLA DTYFYWGTVRTGGLALRWFKDAVCRQEANESYYRTLDELAQAYPPGCNGALFFPYLTGNS TSRPYVRGTFTGLTLEANQGALWRCVLEGIGYDYREIMAQCRQADIKINGVTVTEGGSRD ALWNQIKADMLETTVYTLAEAGGAMPTNAVIAAYSAGHISDVRGPLQERIRLRHTFLPRE NAVRLYKKQYERRCRLLTALNEGEKAARRYDESSY >gi|290780639|gb|ADGP01000033.1| GENE 181 201451 - 202311 1079 286 aa, chain + ## HITS:1 COG:CAC2708 KEGG:ns NR:ns ## COG: CAC2708 COG1250 # Protein_GI_number: 15895965 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Clostridium acetobutylicum # 4 286 2 282 282 333 61.0 2e-91 MFCKKVMVIGAGTMGSGIAQVFATHGCQVILNDIKDEFIAAGKGKIDKSLGKMVEKGKMT QADKDATMGRIDGFVTRTADNMKDVDLVVEAAVENLKIKTAIFQELDELCPAHAILASNT SSLAITQIGAATKRPGQVIGMHFFNPAPVMKLLEIINGIATSPETYEKIAECATELGKTP VKVSDFPGFAGNRIVIPMLNEAIQALMDGVASVEDIDAVCKLGFNHPMGPLALCDLIGND VVLHIMEVLYEGFGDPKYRPCPLLKKYVNAGYLGRKTGKGFYDYSK >gi|290780639|gb|ADGP01000033.1| GENE 182 202375 - 203157 948 260 aa, chain + ## HITS:1 COG:CAC2712 KEGG:ns NR:ns ## COG: CAC2712 COG1024 # Protein_GI_number: 15895969 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Clostridium acetobutylicum # 1 254 1 254 261 291 57.0 9e-79 MDYKNILCTVENSIATITIHRPQALNALNAETVQELNDVVKKISADTTVKVVIITGDGEK SFVAGADIKEMSTKNAVEGRAFGQIGQDTFTLIENMPQPVIAAVNGFCLGGGCELACACD IRYAAETAKFGQPEVGLGITPGFGGTQRLPRVIGRGAAKELLYTGGIIDAQEALRLGLVN KVLPQGELMAAVQGLAKKIAKNAPVAVQLCKAAVNRGINCDVVTGIAYEAEVFGLCFATV DQKEGMSAFIEKRKANFQGK >gi|290780639|gb|ADGP01000033.1| GENE 183 203269 - 204372 869 367 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0420 NR:ns ## KEGG: Vpar_0420 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 349 1 355 371 245 44.0 3e-63 MSKRFVHSINYLRGLCMLGVIAIHIGSVALTNPTPNLGLIAVLEILSRFSVPAFFFLSAF GLFYKYPLQGPFSYTTYLKRRLKTVFIPYLFWSLFYLCYMSVAEHSYTLFRPLTLGKTLL FGLSMYHIYFLVILLWFYLLMPLWRYLLKKTDRHASIFFPLLFIGNVIFNYYSSYVWIAP PTSLWHDLFVYRLNYLVLHYIFIFFFGAFTAEHFPAVIAWMKNHAVFLYLFQGAAVLAML GSYAGVMHYWQYSALSAVFTIHQLSPIGMIYTVSTLLFFLYRWECRSLSPVCQRLFTLLG NVSYPMYLVHPVWLSIGAAYLHHRHLVPDAAYILCLYLFVTLTSLLYSLLIQKISLPSWL QICLGIK >gi|290780639|gb|ADGP01000033.1| GENE 184 204499 - 205014 545 171 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0265 NR:ns ## KEGG: Vpar_0265 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 7 167 4 166 167 110 49.0 2e-23 MAHSVIQKITRTALLLAVTLLLQGLRLVIPVPPQISLFFIGSLVNACLVIAVLRTDLKAG SVIAVAAPVFAYLEGMLPLPFFIPVVAVGNLVYVVFIWALQQYGLRKLYIAAFLKAIVLF GGFSLLFALVQVPPKITHMILFAMSWPQIVTGIIGLVVGYAVSQRLKKVDR >gi|290780639|gb|ADGP01000033.1| GENE 185 205031 - 205429 350 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969317|ref|ZP_06560842.1| ## NR: gi|290969317|ref|ZP_06560842.1| hypothetical protein HMPREF0889_0849 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0849 [Megasphaera genomosp. type_1 str. 28L] # 1 132 1 132 132 254 100.0 2e-66 MLYYVPAVIGIFLIGFGVYHGYALQAFIRRCTVRTEGVVEAFVCPPQKGRPLYFPVISYR DRDGKVQRKQYRWGDSQWHIQVGDIVSLQYNPQNYDEFYLYAEQATWRQYANAFCIILGG IIFISAYYRLAM >gi|290780639|gb|ADGP01000033.1| GENE 186 205448 - 206047 759 199 aa, chain + ## HITS:1 COG:BS_mtrA KEGG:ns NR:ns ## COG: BS_mtrA COG0302 # Protein_GI_number: 16079335 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Bacillus subtilis # 11 183 6 178 190 146 42.0 2e-35 MAYELQTQEQQEQAVQSMRTFLQALGLDLQALGMEKTPQRVTAAFTQFFSGLREDPDKEW GHPIQTGTDGLVAVRNIRFHSLCEHHLLPFFGTVHIAYYPQHGKVAGFGHFIRAVTILAE RPQLQERLTEEICRSVYRGLQPAGVLVIVKAKQLCMTMLQAAAGDTDIVTAATAGNIVNG NAAYEQAWKLLMEDTTNAL >gi|290780639|gb|ADGP01000033.1| GENE 187 206037 - 206885 888 282 aa, chain + ## HITS:1 COG:BS_sul KEGG:ns NR:ns ## COG: BS_sul COG0294 # Protein_GI_number: 16077145 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Bacillus subtilis # 16 278 19 276 285 261 52.0 1e-69 MHFEKRRYTWADGKTLTIGERPLIMGILNITADSFSDGGCWNTPERALQHMRQMIADGAD IIDVGAESTRPGYCTALGEEEEISRLEKILPLLLQHTTVPISVDTYKAKTAAYAMAAGAH ILNDIWGLQYVREPGEMAAVAAAYNVPIIVMHNQETTVYRDLLSDMQHFFTRTMAIAAHA GIDESCIITDPGLGLFGKTTEQNLYIMQHLETFTRLPYPLLLGPSRKRFIGAVLDLPVQE RMEGTGAVCVAGVLAGAAILRVHDVRPAARMCRMAAALRRQE >gi|290780639|gb|ADGP01000033.1| GENE 188 206885 - 207247 467 120 aa, chain + ## HITS:1 COG:BH0094 KEGG:ns NR:ns ## COG: BH0094 COG1539 # Protein_GI_number: 15612657 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Bacillus halodurans # 6 118 1 114 114 100 43.0 8e-22 MDCIQLTNMAFWGYHGCLEEEQRNGQPFYVDLKLYCSLRTAGKTDDLAATIDYSKVYALL RQIMTNTSYHLIEALAETVSEKILSVFPVEKVCVTVHKPQAPMGGLVGDVAVTIERGRHE >gi|290780639|gb|ADGP01000033.1| GENE 189 207240 - 207743 459 167 aa, chain + ## HITS:1 COG:mll0786 KEGG:ns NR:ns ## COG: mll0786 COG0801 # Protein_GI_number: 13470947 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Mesorhizobium loti # 2 164 6 167 170 141 46.0 5e-34 MNRFYLSLGANLGEREETLVQAVSLLRRAACDITALSSLYETVPWGKTDQPDFLNAALAL RTERDGAALLAVCMDIERRLGRQRHEKWGARTIDLDLVYSPDEECHTVNLQLPHPYLTQR AFVLVPLQEIAPNLCFYGKSIDRWIHRVSQEGQQVRRYRKGNTWKKF >gi|290780639|gb|ADGP01000033.1| GENE 190 207728 - 208387 793 219 aa, chain + ## HITS:1 COG:CAC2435 KEGG:ns NR:ns ## COG: CAC2435 COG0745 # Protein_GI_number: 15895700 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 219 3 223 224 212 49.0 4e-55 MEKILIADDEQLMRRLVHDFLLPEGYELMEAADGKAALAAYEQYHPDLILLDVMMPGYDG WTVCREIRRESAVPIIMLTAKGEEIDQLFAYDLGVDEYVTKPFSPKILVAKIKAVFRRSK HAAEGEACGVCLDKDARQVVLDGKNVDLSPTEYKLLNYLMSNTGKALSRRQILNQVWNYD YYGDLRTVDTHINRLRIKLGIKGEYIQTVRGYGYRYNAR >gi|290780639|gb|ADGP01000033.1| GENE 191 208485 - 209300 761 271 aa, chain + ## HITS:1 COG:CAC2434 KEGG:ns NR:ns ## COG: CAC2434 COG0642 # Protein_GI_number: 15895699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 259 235 489 492 175 36.0 7e-44 MGKRSDALSAQLHAALAAKNAANRQLQAELRRTKEMETMRQQFLFAVSHELKTPLAIIQG YAEGLESLTIDEETQRRYCRIIQSEARKMGIFVKDLLDVSRLEMGTLQLQPVLFDFSALI DEMKERFSRIIVQKELCITWEIPKDILIFGDPARIDVILTNLISNAVDYTPQGRKIRISI LPKEGGYCIRVYNQGIRIPEKEQTLIWNAFYKGSSGQPTDRTFGGHGLGLGIVSSLVTLH GEAYGVYNEADGVTFWFTVSDREKELPVKNE Prediction of potential genes in microbial genomes Time: Thu Jul 14 10:13:14 2011 Seq name: gi|290780625|gb|ADGP01000034.1| Megasphaera genomosp. type_1 str. 28L contig00005, whole genome shotgun sequence Length of sequence - 7811 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 4, operones - 2 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 703 642 ## gi|290969325|ref|ZP_06560849.1| hypothetical protein HMPREF0889_0102 2 1 Op 2 . + CDS 757 - 1005 287 ## gi|290969326|ref|ZP_06560850.1| hypothetical protein HMPREF0889_0103 3 1 Op 3 . + CDS 977 - 1510 414 ## COG0860 N-acetylmuramoyl-L-alanine amidase 4 1 Op 4 . + CDS 1535 - 1732 362 ## gi|290968058|ref|ZP_06559607.1| hypothetical protein HMPREF0889_0620 5 1 Op 5 . + CDS 1765 - 1998 426 ## gi|290969329|ref|ZP_06560853.1| hypothetical protein HMPREF0889_0106 + Term 2010 - 2068 0.9 6 1 Op 6 . + CDS 2187 - 2735 685 ## gi|290969330|ref|ZP_06560854.1| RNA polymerase sigma factor, sigma-70 family + Term 2792 - 2840 13.1 + Prom 2832 - 2891 4.0 7 2 Tu 1 . + CDS 2948 - 3382 328 ## COG3727 DNA G:T-mismatch repair endonuclease + Term 3622 - 3653 -0.5 - Term 3570 - 3613 13.1 8 3 Tu 1 . - CDS 3643 - 4074 676 ## Acfer_0012 hypothetical protein - Prom 4290 - 4349 7.8 + Prom 4177 - 4236 6.9 9 4 Op 1 33/0.000 + CDS 4318 - 5283 1248 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 10 4 Op 2 35/0.000 + CDS 5280 - 6293 1124 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 11 4 Op 3 1/0.000 + CDS 6286 - 7074 209 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 12 4 Op 4 . + CDS 7111 - 7810 746 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins Predicted protein(s) >gi|290780625|gb|ADGP01000034.1| GENE 1 2 - 703 642 233 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969325|ref|ZP_06560849.1| ## NR: gi|290969325|ref|ZP_06560849.1| hypothetical protein HMPREF0889_0102 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0102 [Megasphaera genomosp. type_1 str. 28L] # 9 233 1 225 225 312 99.0 1e-83 TVTNAAGPVPDVMPAAAETTATAVAHAGSDVMPAAAETTATDVAHAVPDVMSVAAETTAT DVAGAVPDVMPAATETTVTDLFGSAPAEGTPATAVPDAAAAAATGDEVTEERIIIDEDGY EVILLPPKPQRTLPQVPTGADGRPVYGDLVRSLRTESPARDTLTVYTQAFGSPNDADRRE LARLGDRYGDATLQTAIGRAQRYGIGNLRYIAKIAANMRGLSYGPTGTASCRL >gi|290780625|gb|ADGP01000034.1| GENE 2 757 - 1005 287 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969326|ref|ZP_06560850.1| ## NR: gi|290969326|ref|ZP_06560850.1| hypothetical protein HMPREF0889_0103 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0103 [Megasphaera genomosp. type_1 str. 28L] # 1 82 1 82 82 137 100.0 2e-31 MNKFFEFLRTPLAGAVIFLLQRLLGSMAEAGQRAGRRPENPREGDVTGIAVGGSEAAVHM AVQQTRQEEKGAAHENISEPRA >gi|290780625|gb|ADGP01000034.1| GENE 3 977 - 1510 414 177 aa, chain + ## HITS:1 COG:all1140_1 KEGG:ns NR:ns ## COG: all1140_1 COG0860 # Protein_GI_number: 17228635 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Nostoc sp. PCC 7120 # 1 166 1 166 177 91 36.0 8e-19 MKIFLNPGHDRRLDSGAVHPTRGLRECDLAYALGERVKHYLEARRMTVLTEQQHNLQAVC AHANESGAHIFVSLHFNAFNGRAGGTETLVGRSAAAVLLGHAVQARVQQVLQLPDRGIKE RPDLYVLRATRMPAILVETCFIDNDADLRRYEGREDACAHAVADGICQYGDAAGFRV >gi|290780625|gb|ADGP01000034.1| GENE 4 1535 - 1732 362 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290968058|ref|ZP_06559607.1| ## NR: gi|290968058|ref|ZP_06559607.1| hypothetical protein HMPREF0889_0620 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0620 [Megasphaera genomosp. type_1 str. 28L] # 1 65 1 65 65 85 95.0 1e-15 MRTQQVSAKMKVIMNRDGKSRTFTMSKLRSGAEAANVYTAAKAVSALQKGDLAAVHMVVD TKIEA >gi|290780625|gb|ADGP01000034.1| GENE 5 1765 - 1998 426 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969329|ref|ZP_06560853.1| ## NR: gi|290969329|ref|ZP_06560853.1| hypothetical protein HMPREF0889_0106 [Megasphaera genomosp. type_1 str. 28L] hypothetical protein HMPREF0889_0106 [Megasphaera genomosp. type_1 str. 28L] # 1 77 1 77 77 122 100.0 7e-27 MEEKTVTTLALSFVTEQGKIARYSLREPKDGLSRADVDAGIKVLLSADIFAVGEDRFRAL KDAAIVQRSVRKLTTQA >gi|290780625|gb|ADGP01000034.1| GENE 6 2187 - 2735 685 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290969330|ref|ZP_06560854.1| ## NR: gi|290969330|ref|ZP_06560854.1| RNA polymerase sigma factor, sigma-70 family [Megasphaera genomosp. type_1 str. 28L] RNA polymerase sigma factor, sigma-70 family [Megasphaera genomosp. type_1 str. 28L] # 1 182 40 221 221 322 100.0 9e-87 MKSLRDDIMAYRQGNRQIAADLIQQVAPYIHKLQRRYTYCMERDEIFNICFDAMHTFLQT ADLQHADCTVRQVLAALHNAVRREGYQVRLMQSKLRDNFAAVCSAYGAVVSPDTYTVLRL HLQDLLRQEPPLTRRLLSDRYSWQMNYAELSRKYGMSERRIRYMIRRHEARLREQLREWQ ES >gi|290780625|gb|ADGP01000034.1| GENE 7 2948 - 3382 328 144 aa, chain + ## HITS:1 COG:SMc03764 KEGG:ns NR:ns ## COG: SMc03764 COG3727 # Protein_GI_number: 15966902 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Sinorhizobium meliloti # 6 130 7 131 145 119 44.0 2e-27 MKRKRPMTRSENMARVKSKNTKPEIFLRKRLWHKGLRYRLHEKNLPGTPDLYIPKYRAAV FVNGCFWHRHEHCRYASLPKHHHAFWQEKLTGNVIRDQHNYRRLADMGIRVIVVWGCTIK QMMKDEKTADRTVARLMDEITRQG >gi|290780625|gb|ADGP01000034.1| GENE 8 3643 - 4074 676 143 aa, chain - ## HITS:1 COG:no KEGG:Acfer_0012 NR:ns ## KEGG: Acfer_0012 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 1 143 4 146 146 136 48.0 2e-31 MNKKAESFKKFLDEKKINDFVVEEMKEDDLHAVVFRSYLTVTGNNLNTILVLDDSVYSMI RVFVAPQAQTEKNRDALTKLINEYNMTYKAFKYFTDTDGNLILDLCMVNTGDTVDGELVY ALYQTISDHLETAYKDLMKIILE >gi|290780625|gb|ADGP01000034.1| GENE 9 4318 - 5283 1248 321 aa, chain + ## HITS:1 COG:BH3290 KEGG:ns NR:ns ## COG: BH3290 COG0614 # Protein_GI_number: 15615852 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Bacillus halodurans # 1 307 1 305 319 129 27.0 9e-30 MKKVILGIVVIVLVCVIGGAVYRQQSVTQASTAAMRTVTDSTGTKVQIPMHPKRVVFLNV SNMDLYVTAGGTAAIAGKPTSHAMSPELQKAVAQVPEVGIIHSPNVEKIISLKPDLVVGI NVPFHNQIRKTLQDNGIPLYINSLDNYEDTIKTLQFFGSLTGDEKGTQEKIKAIDAKCHA VETLKNGRASPKTLIIFSSPASNNMATANSFSGDVLRRMGGTNIADFDASLSAPYVPLSM EYVVKQNPDIIFIISMGTSAQMNDEFRHQMQVASSWRQVKAVRDHRIYELPMDLFTVNPG SRIGDAMLYMAHCLYGRGESS >gi|290780625|gb|ADGP01000034.1| GENE 10 5280 - 6293 1124 337 aa, chain + ## HITS:1 COG:BH3291 KEGG:ns NR:ns ## COG: BH3291 COG0609 # Protein_GI_number: 15615853 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus halodurans # 8 332 4 328 332 259 45.0 6e-69 MIAGQRRERREAIRVGTLCAGIVLLLGVMVTALAIGAVPIPLREVLRLFLFSGDADTVRI IYTLRLPRVICASLAGADLALSGCILQGILRNPLADPGIIGISAGAGLAAMLLMLTAPTW TAFVPMAAFVGGIAAAVIVFALSWHRGIQPLRLVLAGVAVAAFFGGGMTALSVFFSDKIQ GTVAWMAGGFAGSSWEYVRMILPYSLIGIGGTFCCFRQLNALQLGDEVAKTLGVHAARTR TILIIFAALLAAAAVSVAGLLGFVGLIIPHVMRLIVGSDFETLLPASAIFGAVLVVAADI AARTVLSPMEIPVGIFMSFVGAPFFLYLLQRRMRHYE >gi|290780625|gb|ADGP01000034.1| GENE 11 6286 - 7074 209 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 17 230 19 226 305 85 29 2e-16 MNKLSALHLRLQYGERVIIKDLTLAFDKPEVISIIGPNGSGKSTLLKALAKLLIPTAGAV YLNGGDMRHMSLTSLAKVLSVLPQSVQAPGDMTVTDLVCFGRMPYRGRFSSLTKADWRSI EEALAATELCALRDQPLTALSGGERQRAWLAMALAKEPKILLLDEPTTYLDIRHQLDIME LVVRLHRELGITVIMVMHDLNHAARYSQRLIALKQGEIVADGTVETVFREDVLASLYGIR AMVTTVGRGTEKQRICLPYATI >gi|290780625|gb|ADGP01000034.1| GENE 12 7111 - 7810 746 233 aa, chain + ## HITS:1 COG:PA1922 KEGG:ns NR:ns ## COG: PA1922 COG4771 # Protein_GI_number: 15597118 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 27 162 29 164 653 101 38.0 1e-21 MKYRKFWQNTGFISAAVLLSMTSSPAAGATPVQTRDVVVTASKTATEVRTVPQAVEVITA KDIQLSGCNDLRSVLAYAANLNLSRAVMTGNAVSLRGMNTDHTLILVDGRRIVGEDTKET QNVYAFQRLSPNDVARIEIVRGPSSSLYGSEAIGGVINIITKAPQKEGVTVGVNTGTDKT AVFVHADSGKHGKWSSAVDVRLEQIRKQTRHVYERVEEGQGDMSGQGGMSGQG