Prediction of potential genes in microbial genomes Time: Thu May 26 11:17:21 2011 Seq name: gi|241321393|gb|ACQV01000001.1| Neisseria flavescens SK114 ctg1118407793862, whole genome shotgun sequence Length of sequence - 6436 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 57 - 93 8.2 1 1 Tu 1 . - CDS 108 - 224 165 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase - Prom 290 - 349 3.6 + Prom 31 - 90 1.7 2 2 Tu 1 . + CDS 293 - 1513 1798 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 1536 - 1576 8.4 + Prom 1618 - 1677 5.0 3 3 Op 1 56/0.000 + CDS 1843 - 2214 645 ## PROTEIN SUPPORTED gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 4 3 Op 2 51/0.000 + CDS 2332 - 2802 781 ## PROTEIN SUPPORTED gi|225076440|ref|ZP_03719639.1| hypothetical protein NEIFLAOT_01486 5 3 Op 3 30/0.000 + CDS 2821 - 4926 2613 ## COG0480 Translation elongation factors (GTPases) + Term 4935 - 4982 7.1 + Prom 4931 - 4990 3.2 6 3 Op 4 . + CDS 5010 - 6233 1547 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 6300 - 6331 1.1 Predicted protein(s) >gi|241321393|gb|ACQV01000001.1| GENE 1 108 - 224 165 38 aa, chain - ## HITS:1 COG:NMB0178 KEGG:ns NR:ns ## COG: NMB0178 COG1043 # Protein_GI_number: 15676105 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Neisseria meningitidis MC58 # 5 38 225 258 258 66 88.0 1e-11 MAFRFEEAKADILKRAETQSELAVFKDFFAQSTRGIIR >gi|241321393|gb|ACQV01000001.1| GENE 2 293 - 1513 1798 406 aa, chain + ## HITS:1 COG:NMB0133 KEGG:ns NR:ns ## COG: NMB0133 COG0086 # Protein_GI_number: 15676061 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Neisseria meningitidis MC58 # 3 406 988 1391 1391 741 94.0 0 MNYDDIGRERERHKVPYGAILLVQDGEAIKAGQTLATWDPHTRPMITEHAGMVKFENVEE GVTVAKQTDDVTGLSTLVVIDGKRRSSGASKLLRPTVKLLDENGLEICIPGTTTPVSMAF PVGAVITIREGQEVGKGDVLARIPQASSKTRDITGGLPRVAELFEARVPKDAGMLAEITG TVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDGQVVNRGETIVDGAVDPHDILR LQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQMLRRVNIVDSGDTEFITGEQVER GDVMLANEKAMAEDKEPARYENVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKQD ELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQQADQETSETEASDE >gi|241321393|gb|ACQV01000001.1| GENE 3 1843 - 2214 645 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676064|ref|NP_273194.1| 30S ribosomal protein S12 [Neisseria meningitidis MC58] # 1 123 1 123 123 253 100 4e-67 MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCKVRLTNG FEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDTAGVKDRKQARSKYGAK RPK >gi|241321393|gb|ACQV01000001.1| GENE 4 2332 - 2802 781 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076440|ref|ZP_03719639.1| hypothetical protein NEIFLAOT_01486 [Neisseria flavescens NRL30031/H210] # 1 156 1 156 156 305 100 6e-83 MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVYGALEQIEKKTGKVAIE VFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMRWVRDAARKRGEKSMDLRL AGELIDAAEGRGGALKKREEVHRMAEANKAFSHFRF >gi|241321393|gb|ACQV01000001.1| GENE 5 2821 - 4926 2613 701 aa, chain + ## HITS:1 COG:NMA0135 KEGG:ns NR:ns ## COG: NMA0135 COG0480 # Protein_GI_number: 15793163 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Neisseria meningitidis Z2491 # 1 701 1 701 701 1318 98.0 0 MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVHDGAATTDYMEQEQERG ITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKTRLRANPVPIVIPVGAEDSFS GVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEWRQNMIEAAAEASEELMDKYLGG EELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQRMLDAVVELLPAPTDIPPVQGVNP NTEEADSRQASDEEKFSALAFKMLNDKYVGQLTFIRVYSGVVKSGDTVLNSVKGTRERIG RLVQMTAADRTEIEEVRAGDIAAAIGLKDVTTGETLCAESAPIILERMEFPEPVIHIAVE PKTKADQEKMGIALNRLAKEDPSFRVRTDEESGQTIISGMGELHLEIIVDRMKREFGVEA NIGAPQVAYRETIRKEVEAEYKHAKQSGGKGQYGHVVIKMEPMEPGGAGYEFIDEIKGGV IPREFIPSVDKGIRDTLPNGIVAGYPVVDVRVRLIFGSSHDVVSSQLAFELAASQAFKEG MRKANPALLEPIMAVEVETPEEYMGDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEM FGYSTDLRSATQGRATYSMEFKKYAEAPAHVAAAVTEARKG >gi|241321393|gb|ACQV01000001.1| GENE 6 5010 - 6233 1547 407 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 382 1 395 407 600 74 1e-172 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTIT VELIAPIAMEEGLRFAIREGGRLEPKGFEFLGRLKIFRYLATLHPKK Prediction of potential genes in microbial genomes Time: Thu May 26 11:17:29 2011 Seq name: gi|241321376|gb|ACQV01000002.1| Neisseria flavescens SK114 ctg1118407793883, whole genome shotgun sequence Length of sequence - 15104 bp Number of predicted genes - 12, with homology - 10 Number of transcription units - 8, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 194 167 ## COG2801 Transposase and inactivated derivatives - Prom 295 - 354 2.6 2 2 Tu 1 . - CDS 534 - 884 506 ## gi|255067163|ref|ZP_05319018.1| transposase - Prom 967 - 1026 2.7 3 3 Tu 1 2/1.000 - CDS 1056 - 3191 3424 ## COG1289 Predicted membrane protein - Prom 3222 - 3281 4.8 4 4 Op 1 6/1.000 - CDS 3354 - 4583 1914 ## COG5008 Tfp pilus assembly protein, ATPase PilU - Term 4611 - 4659 2.9 5 4 Op 2 . - CDS 4670 - 5716 1595 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT - Prom 5750 - 5809 4.8 + Prom 5698 - 5757 6.0 6 5 Op 1 4/1.000 + CDS 5834 - 6529 522 ## COG0325 Predicted enzyme with a TIM-barrel fold 7 5 Op 2 . + CDS 6607 - 7404 1060 ## COG0345 Pyrroline-5-carboxylate reductase 8 5 Op 3 . + CDS 7407 - 8015 448 ## gi|241758484|ref|ZP_04756604.1| conserved hypothetical protein + Prom 8055 - 8114 2.2 9 5 Op 4 . + CDS 8199 - 8615 654 ## COG1734 DnaK suppressor protein + Term 8638 - 8688 13.1 + SSU_RRNA 9083 - 10617 99.0 # FJ983092 [D:1..1534] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + TRNA 10724 - 10800 96.8 # Ile GAT 0 0 + TRNA 10806 - 10881 93.7 # Ala TGC 0 0 + LSU_RRNA 11383 - 14118 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 14215 - 14323 98.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 14073 - 14132 48.8 10 6 Tu 1 . + CDS 14350 - 14529 64 ## + Term 14560 - 14591 -1.0 11 7 Tu 1 . - CDS 14494 - 14649 71 ## - Prom 14674 - 14733 4.4 + Prom 14607 - 14666 3.6 12 8 Tu 1 . + CDS 14701 - 14988 370 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 15030 - 15068 3.3 Predicted protein(s) >gi|241321376|gb|ACQV01000002.1| GENE 1 2 - 194 167 64 aa, chain - ## HITS:1 COG:HI1280 KEGG:ns NR:ns ## COG: HI1280 COG2801 # Protein_GI_number: 16273195 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 2 64 15 77 91 72 53.0 2e-13 MTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQ GVLY >gi|241321376|gb|ACQV01000002.1| GENE 2 534 - 884 506 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 116 251 366 366 224 93.0 1e-57 MSKYTLHFKYQAVLHYLHIRSQQRTADDYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT EHRKNPFIADKPDHEKTQAELIEELCHMRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241321376|gb|ACQV01000002.1| GENE 3 1056 - 3191 3424 711 aa, chain - ## HITS:1 COG:NMA0220 KEGG:ns NR:ns ## COG: NMA0220 COG1289 # Protein_GI_number: 15793243 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 705 1 711 716 1017 71.0 0 MKTPPLKPLIIASLPVFASVFIAATLVWHFDTPKLVMPFVLGIIAGGLVDLDNRLTGRLK NIVITVALFTLSSLLAQSTIGTGVPFILAMTLMTFGFTILGTVGLKYRTFAFGALAVATY TTLTHTPETYWLTNPVMILLGTVLYSVNILIFQIILPHRPVQETVANAYDALSNYFDAKA DFFDPDEAAWLGNRQIDLAMSNTGVITAFNQCRGALFYRLRGQHRHPRTAKMLRYYLCAQ DMHERISSAHVDYSEMAEQLKNTDLIFRIRRLLEMQGQACRNVASSLRNNKPYAYSKRLG RAMEGCRQSLSHFAETHADNANLHNIRRLLDNLSSVDYQLRQLQNDASLAENDNADTRIA ALENTKFRNIGETVLSQLNFDSGVFRHATRLSIVVAAACIIVEILHLNLGYWILLTALFV CQPNYTATKSRVYQRIAGTILGVIVGSLVPYFTPSIETKLWIVIASTTLFFMTRSYKYSF STFFITIQALTSLSLAGLDVYHAMPIRIIDTIVGSVIAWAAATYLWPDWRYLTLSHTAAQ TITANGRYLDAILDQLQNGSRDDFDYRLTRRQAHESIAALSSTLSDMSSNPKKYQDRLQD GFTLLKTSYALTGHISALGAYRDQVRIDGNDGFAPYAKLTHHIAELLTQMPQTDPEAFET AMTQIRQEFAELEQNTQVQQDHVLKHQLDLIIRQLTPCYQALHRQADVEAV >gi|241321376|gb|ACQV01000002.1| GENE 4 3354 - 4583 1914 409 aa, chain - ## HITS:1 COG:NMB0051 KEGG:ns NR:ns ## COG: NMB0051 COG5008 # Protein_GI_number: 15675989 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis MC58 # 7 409 6 408 408 548 67.0 1e-156 MSDLAPLHDLLSEMVQAYSQKNQAPHIPTPAEIGTHLHPLLDRMCEEAEKRNASDIFISA DFPPAIKVGGTLTPMPHKALTGADTAAIAESTMNPDQLEAFNRDWEINYSVQSRSNTRYR VNAYHEQGRVGMVLRRVSQDIPEMKTLGLPEKLQELALAPRGLLILAGPNGSGKSTTMAS MLNYRNQKLPGHIVTIEDPIEFIYKPCRSIFTQREIGIDTDNWKIAVQSAMRQAPDVVCI GEVRSEESMKYALQLAQTGHLCVFTIHANTASQTIERIINFYPEDRRQQVLIDLALNLVG IIGQRLTIKKNRQRTAVTDLLLNTPAMQDLIFQGELLEIRDLMARSGSNGMQTFDQNLFN LYAQGQIELSEALRQAVSANDLRLRIQMHDEGNNTERLYDRISDLNLMT >gi|241321376|gb|ACQV01000002.1| GENE 5 4670 - 5716 1595 348 aa, chain - ## HITS:1 COG:NMB0052 KEGG:ns NR:ns ## COG: NMB0052 COG2805 # Protein_GI_number: 15675990 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Neisseria meningitidis MC58 # 1 346 1 346 347 573 86.0 1e-163 MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQR KLYQQDFEVDFSFELPNVARFRVNAFMTERGPAAVFRTIPGTVLTLEELRAPRIFQKIAE NPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIEDPIEFVHQSKKALINQRELHQ HTNSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA QINAALQTGQAHGMQTLDQALQTLVRQGTISPELARSKAQNIENLSIF >gi|241321376|gb|ACQV01000002.1| GENE 6 5834 - 6529 522 231 aa, chain + ## HITS:1 COG:NMA0217 KEGG:ns NR:ns ## COG: NMA0217 COG0325 # Protein_GI_number: 15793240 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Neisseria meningitidis Z2491 # 1 227 1 227 228 341 75.0 7e-94 MSVLQQNYQDVCRAVEQAAEAAGRPADAVKLVAVSKTFPADDIREVYVAGQRDFGENYIQ EWFEKTETLADLPDIVWHVIGDVQSNKTKFVAERAHWVHTIDRLKTARRLSEQRSSEMPP LQVCIEVNIAAEEAKHGVAPAEAVALALEVAQLPNIKVRGLMCVAKADSSDDELRSQFHT MQRLLAELNAAGVEADVLSMGMSGDMPIAVECGATHVRIGSAIFGKRHYPQ >gi|241321376|gb|ACQV01000002.1| GENE 7 6607 - 7404 1060 265 aa, chain + ## HITS:1 COG:NMA0215 KEGG:ns NR:ns ## COG: NMA0215 COG0345 # Protein_GI_number: 15793238 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Neisseria meningitidis Z2491 # 1 263 1 263 263 375 75.0 1e-104 MNIYFLGGGNMATAIAGGLVKQDGYRVHIVERGSERRAQLVQELGVATSENLPELSADNV LILAVKPQDMQAACQNIRLNGALVLSVAAGLSIDTLSHYLGGTRRIVRIMPNTPAKIGLG VSGMFADAGVSEADRTAADGIMRSVGTTVWLNEEEQLHNITGISGSGPAYVFYLLGALQN AALAQGFNEQDARELSLATFKGAVALAEQTGEAFAQLQQNVTSKGGTTHEAIETFKARHV AEAIEQGVEACVKRSQEMAQQYKAV >gi|241321376|gb|ACQV01000002.1| GENE 8 7407 - 8015 448 202 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758484|ref|ZP_04756604.1| ## NR: gi|241758484|ref|ZP_04756604.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 202 1 202 202 343 100.0 3e-93 MRGDLLLLLADAIAILCITRFLLRYAGLAAEHPLLKFSIQATGWLTKPWQKAFPSGEKTD WYCLPAGFLVYYLACTAIIFISPALSISNKLILANFWFAALHMLKAAAYTLLIGLIIRMV SSIQSHYSPLTYAIERILQPLLKPFSFLRVGRYDFSGSLLALLIMVVAGPMVSPTYPANQ PMVASIGRLKAQQVLTTKNTTS >gi|241321376|gb|ACQV01000002.1| GENE 9 8199 - 8615 654 138 aa, chain + ## HITS:1 COG:NMB0056 KEGG:ns NR:ns ## COG: NMB0056 COG1734 # Protein_GI_number: 15675994 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Neisseria meningitidis MC58 # 1 138 1 138 138 223 91.0 1e-58 MAKLTEQDILNWNGPEEDYMNSDQLAFFRELLVKMQEELIENANTTTGHLQEHESAPDPA DRATQEEEYALELRTRDRERKLLNKVQATIRSIDEGNYGFCADTGEPIGLKRLLARPTAT LSVEAQERRERMKKQFAD >gi|241321376|gb|ACQV01000002.1| GENE 10 14350 - 14529 64 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGAFYMPVGSIGLAIGDGVRGARILMNRYLLSVRAFLVFGLCMITLLLFLNKSTESYG >gi|241321376|gb|ACQV01000002.1| GENE 11 14494 - 14649 71 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLFQAVNTVTYADRATAHTHINAYAILTQISFDFKYSKQLTVTFSTFVQE >gi|241321376|gb|ACQV01000002.1| GENE 12 14701 - 14988 370 95 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 81 107 187 205 94 66.0 5e-20 MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEE LKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK Prediction of potential genes in microbial genomes Time: Thu May 26 11:18:07 2011 Seq name: gi|241321320|gb|ACQV01000003.1| Neisseria flavescens SK114 ctg1118407793872, whole genome shotgun sequence Length of sequence - 45327 bp Number of predicted genes - 50, with homology - 49 Number of transcription units - 23, operones - 14 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 14 - 67 2.0 1 1 Op 1 5/0.125 - CDS 180 - 362 170 ## COG3039 Transposase and inactivated derivatives, IS5 family 2 1 Op 2 . - CDS 516 - 722 294 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 839 - 898 6.8 + Prom 843 - 902 5.5 3 2 Tu 1 . + CDS 928 - 1413 814 ## NMO_1156 hypothetical protein + Term 1432 - 1481 5.0 - Term 1415 - 1474 12.3 4 3 Op 1 . - CDS 1484 - 1924 612 ## gi|241758525|ref|ZP_04756644.1| putative lipoprotein - Term 1948 - 1991 12.6 5 3 Op 2 . - CDS 1996 - 2442 591 ## COG0691 tmRNA-binding protein - Prom 2466 - 2525 6.6 6 4 Op 1 . - CDS 2527 - 2742 283 ## gi|225075511|ref|ZP_03718710.1| hypothetical protein NEIFLAOT_00524 - Term 2758 - 2788 3.0 7 4 Op 2 . - CDS 2818 - 3021 408 ## COG1278 Cold shock proteins - Prom 3139 - 3198 6.3 + Prom 3130 - 3189 4.2 8 5 Op 1 19/0.000 + CDS 3279 - 3590 418 ## COG2127 Uncharacterized conserved protein 9 5 Op 2 . + CDS 3594 - 5873 1384 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 5891 - 5926 7.4 - Term 5872 - 5922 15.6 10 6 Tu 1 . - CDS 5940 - 7919 2787 ## COG0021 Transketolase - Prom 7961 - 8020 6.6 + Prom 8222 - 8281 5.3 11 7 Op 1 3/0.125 + CDS 8369 - 9853 1759 ## COG0348 Polyferredoxin 12 7 Op 2 . + CDS 9859 - 10425 544 ## COG3198 Uncharacterized protein conserved in bacteria + Term 10434 - 10480 14.8 13 7 Op 3 . + CDS 10499 - 11662 292 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 11778 - 11845 30.2 + TRNA 11756 - 11831 88.3 # Gly GCC 0 0 + TRNA 11866 - 11941 88.3 # Gly GCC 0 0 + TRNA 11966 - 12041 88.3 # Gly GCC 0 0 + TRNA 12063 - 12138 88.3 # Gly GCC 0 0 + TRNA 12175 - 12248 65.1 # Cys GCA 0 0 + TRNA 12358 - 12447 74.5 # Leu TAA 0 0 14 8 Tu 1 . - CDS 13049 - 13258 176 ## - Prom 13490 - 13549 6.5 + Prom 13226 - 13285 3.1 15 9 Op 1 . + CDS 13332 - 14036 365 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 16 9 Op 2 . + CDS 14036 - 14710 155 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 14751 - 14788 6.3 - Term 14734 - 14781 13.6 17 10 Op 1 4/0.125 - CDS 14810 - 15814 1284 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 15849 - 15878 -0.7 18 10 Op 2 . - CDS 15880 - 16842 1269 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 19 10 Op 3 . - CDS 16884 - 17036 67 ## gi|284800107|ref|ZP_06390536.1| NAD dependent epimerase/dehydratase family protein 20 10 Op 4 . - CDS 16957 - 17556 195 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 21 10 Op 5 2/0.250 - CDS 17570 - 18301 941 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 18326 - 18385 3.9 - Term 18346 - 18387 11.3 22 11 Op 1 . - CDS 18411 - 19058 1125 ## COG0563 Adenylate kinase and related kinases 23 11 Op 2 . - CDS 19139 - 19648 761 ## NMC0625 hypothetical protein 24 11 Op 3 11/0.000 - CDS 19660 - 20421 988 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 25 11 Op 4 2/0.250 - CDS 20400 - 20600 423 ## COG2835 Uncharacterized conserved protein 26 12 Op 1 . - CDS 20855 - 21280 394 ## COG3184 Uncharacterized protein conserved in bacteria 27 12 Op 2 . - CDS 21327 - 21776 351 ## gi|241758523|ref|ZP_04756642.1| conserved hypothetical protein 28 12 Op 3 . - CDS 21777 - 21992 207 ## gi|261381163|ref|ZP_05985736.1| putative periplasmic protein 29 12 Op 4 . - CDS 22057 - 23067 395 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase - Prom 23093 - 23152 4.8 + Prom 23166 - 23225 6.3 30 13 Tu 1 . + CDS 23249 - 24598 1516 ## COG1570 Exonuclease VII, large subunit + Prom 24634 - 24693 4.9 31 14 Op 1 2/0.250 + CDS 24722 - 25501 972 ## COG1183 Phosphatidylserine synthase 32 14 Op 2 . + CDS 25503 - 26312 902 ## COG0730 Predicted permeases + Term 26330 - 26368 10.2 - Term 26318 - 26356 10.2 33 15 Op 1 . - CDS 26399 - 27079 513 ## COG2836 Uncharacterized conserved protein - Term 27090 - 27135 -0.2 34 15 Op 2 11/0.000 - CDS 27190 - 28218 1351 ## COG4239 ABC-type uncharacterized transport system, permease component 35 15 Op 3 . - CDS 28267 - 29322 1130 ## COG4174 ABC-type uncharacterized transport system, permease component 36 15 Op 4 2/0.250 - CDS 29422 - 30351 1375 ## COG0523 Putative GTPases (G3E family) 37 15 Op 5 . - CDS 30339 - 30812 518 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 30849 - 30908 9.6 - Term 30879 - 30916 9.1 38 16 Tu 1 . - CDS 30926 - 31750 1070 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 31834 - 31893 5.7 + Prom 31792 - 31851 3.5 39 17 Tu 1 . + CDS 31883 - 32344 844 ## COG3909 Cytochrome c556 + Term 32362 - 32404 10.2 + Prom 32640 - 32699 6.6 40 18 Tu 1 . + CDS 32732 - 35494 2611 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 35524 - 35580 11.6 - Term 35587 - 35636 4.6 41 19 Tu 1 . - CDS 35644 - 36840 2004 ## COG0282 Acetate kinase - Prom 36957 - 37016 6.2 + Prom 36962 - 37021 9.7 42 20 Op 1 . + CDS 37129 - 37380 410 ## NMC1446 hypothetical protein 43 20 Op 2 2/0.250 + CDS 37380 - 37568 303 ## COG3197 Uncharacterized protein, possibly involved in nitrogen fixation 44 20 Op 3 . + CDS 37565 - 38881 1633 ## COG0477 Permeases of the major facilitator superfamily + Term 38919 - 38950 -0.6 + Prom 39065 - 39124 5.5 45 21 Op 1 4/0.125 + CDS 39204 - 40184 932 ## COG0470 ATPase involved in DNA replication 46 21 Op 2 4/0.125 + CDS 40198 - 40548 634 ## COG3215 Tfp pilus assembly protein PilZ 47 21 Op 3 . + CDS 40553 - 41338 931 ## COG0084 Mg-dependent DNase + Term 41546 - 41595 11.3 + Prom 41462 - 41521 6.3 48 22 Op 1 . + CDS 41705 - 43213 2132 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 49 22 Op 2 . + CDS 43297 - 44862 211 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Prom 44895 - 44954 4.6 50 23 Tu 1 . + CDS 44988 - 45320 591 ## COG0526 Thiol-disulfide isomerase and thioredoxins Predicted protein(s) >gi|241321320|gb|ACQV01000003.1| GENE 1 180 - 362 170 60 aa, chain - ## HITS:1 COG:NMA1738 KEGG:ns NR:ns ## COG: NMA1738 COG3039 # Protein_GI_number: 15794631 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 60 110 169 283 114 96.0 5e-26 MELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR >gi|241321320|gb|ACQV01000003.1| GENE 2 516 - 722 294 68 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 68 1 68 335 134 95.0 4e-32 MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTHYLRDHRGRPTYPLLSM FKAVLRGQ >gi|241321320|gb|ACQV01000003.1| GENE 3 928 - 1413 814 161 aa, chain + ## HITS:1 COG:no KEGG:NMO_1156 NR:ns ## KEGG: NMO_1156 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 159 2 160 160 204 64.0 7e-52 MKKTLTTLILCALTPAALAADTYGYLAMWQNPADSNEVLQIKTTKENATQLDATAELETF CKGQDALAGISAGQATGCKTVVPLHNTCIAVAYPKAMGKLTAQNVVAITSPRFKTVHQIA LNQCIKKYGSQGQCALETVYCTSETYYQGTVKTLWEKIKSI >gi|241321320|gb|ACQV01000003.1| GENE 4 1484 - 1924 612 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758525|ref|ZP_04756644.1| ## NR: gi|241758525|ref|ZP_04756644.1| putative lipoprotein [Neisseria flavescens SK114] # 1 146 1 146 146 248 100.0 8e-65 MKTMILAAASAVLLLGACSTTEQRVLKPEELTSIKHVCIIQNAKVRPHDLDRALSKALAK RGIGSTIVTADNRGKLYDSSCPYNLRYKTKGNNEILRKGVFVLRSTKYAVSTVSYSLNDE NHFRTNPDLVKQAEGVVAKLLEKNSK >gi|241321320|gb|ACQV01000003.1| GENE 5 1996 - 2442 591 148 aa, chain - ## HITS:1 COG:NMA1726 KEGG:ns NR:ns ## COG: NMA1726 COG0691 # Protein_GI_number: 15794619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 148 3 150 150 262 89.0 2e-70 MSIANNKKAFHDFFIEDQIEAGIVLEGWEVKAIRAARVQLKESYIYWKKDAFYLVGCHIT ALPTASTHVKPDPVRPRKLLLKQSEINKLIGKTERAGYTIVPLNLHYTRGRIKVEIGLAK GKKQHDKRQSLKEADWKREKQRLMKNVR >gi|241321320|gb|ACQV01000003.1| GENE 6 2527 - 2742 283 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225075511|ref|ZP_03718710.1| ## NR: gi|225075511|ref|ZP_03718710.1| hypothetical protein NEIFLAOT_00524 [Neisseria flavescens NRL30031/H210] # 1 71 1 71 71 114 100.0 1e-24 MNQNSSYQNALNQLDELIRHFRSEGEVSCAVAEREDQILIRLADLKLDLRPEDEKAIADI DRFYRRHVLSE >gi|241321320|gb|ACQV01000003.1| GENE 7 2818 - 3021 408 67 aa, chain - ## HITS:1 COG:NMA1047 KEGG:ns NR:ns ## COG: NMA1047 COG1278 # Protein_GI_number: 15793998 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Neisseria meningitidis Z2491 # 1 67 1 67 67 120 100.0 5e-28 MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMDGFKTLKEGQRVSFDVTTGPKGKQ AANIQAA >gi|241321320|gb|ACQV01000003.1| GENE 8 3279 - 3590 418 103 aa, chain + ## HITS:1 COG:NMA1046 KEGG:ns NR:ns ## COG: NMA1046 COG2127 # Protein_GI_number: 15793997 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 103 1 103 103 196 99.0 1e-50 MNHPNTDHQSDTLLSDINTQPPKRYGVFLLNDDYTTMEFVVEILTEVFMLAQEQAVAVML LVHHEGKGLCGTYTRDIAQTKQHQVMERAKAEGHPLKCIVEEV >gi|241321320|gb|ACQV01000003.1| GENE 9 3594 - 5873 1384 759 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 7 735 11 801 815 537 38 1e-152 MLSPELEHILQLLYREARNARYEFISLEHLLLVLIEEDAAVPNVLKLCGADLKVLSEQLA ASVAENTPQIPDHLLDTVETQPTLGFQRVIQRAMVHTQSAGKAAVEPLDILVAMMSESES HAVYFLKLQSITRFEVLRCIAHGSPDDEDGNDSDGLGREGEEAEQKTGSLSDYTVNLNAE VKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLVGEAGVGKTALAEGLAHQIVNGDIPDA LKEAEVYALDMGSLLAGTKYRGDFEARVKSVLKQLEKIPHAILFIDEIHTIIGAGSTSGG TMDASNLLKPALAKGSLRCIGATTYDEYRTIFDKDHALSRRFQKIDVVEPTVAETVQILR GLKSMFEDFHQVRYTQGALEAAAELSARYINERFLPDKAIDVMDEAGAAQRILPKSKQKK VIGKAQIETVIAKVARIPEKTVSHDDKQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRS GLALPDKPIGSFLFSGPTGVGKTEVAKQLAYSMGVPLQRFDMSEYMERHAVSRLIGAPPG YVGFEQGGLLTEAVNKQPHCVLLLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNV ILIMTTNAGAESLSRPSLGFTAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIV KVVDKFLLQLEHQLLDKKVEAEFMPALRKYLAEKGFDPQMGARPMHRLIQEKIRKPLADE LLFGKLAEGGFVLIDWDATKEEAVLKFKKSKVKPEAETV >gi|241321320|gb|ACQV01000003.1| GENE 10 5940 - 7919 2787 659 aa, chain - ## HITS:1 COG:NMB1457 KEGG:ns NR:ns ## COG: NMB1457 COG0021 # Protein_GI_number: 15677313 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Neisseria meningitidis MC58 # 1 659 1 659 659 1272 94.0 0 MSQLANAIRFLSVDAVQKANSGHPGAPMGMAEMAEVLWTKFLNHNPANPKFYNRDRFVLS NGHASMILYSLLHLTGYNVSIDDLKNFRQLHSKTPGHPEYGYTDGVETTTGPLGQGIANA VGMALAEKILAAEFNKDGLNIVDHHTYVFMGDGCMMEGVSHEACSLAGTLGLGKLIVLYD DNNISIDGKVDGWFTENIPQRFESYGWHVIPNVNGHDTDAIQTAIEAAKAETGKPSLICC KTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGWAYPAFEIPQEIYAAWDAKEKGAKL EAEWNELFAQYQAKYPAEAAEFVRRMDKKLPENFDVYVQAALKEVCAKAETIATRKASQN SIEILAKELPELVGGSADLTPSNLTDWSNSVSVTREHGGNYIHYGVREFGMGAIMNGLTL HGGVKPFGATFLMFSEYERNALRMAALMKINPVFVFTHDSIGLGEDGPTHQPIEQTATLR LIPNMDVWRPCDTVESLVAWSEAVKAADHPSSLIFSRQNLKFQARDEQQLNDIKRGAYVI SEAQGNAQAVVIATGSEVELALEAQKVLAEQGIAVRVVSMPSTNVFDRQDAAYKATVLPE GLPRVAVEAGHADGWYKYVGLNGAVVGINRFGESAPADLLFKEFGFTVDNVVATVKSVL >gi|241321320|gb|ACQV01000003.1| GENE 11 8369 - 9853 1759 494 aa, chain + ## HITS:1 COG:NMB1454 KEGG:ns NR:ns ## COG: NMB1454 COG0348 # Protein_GI_number: 15677310 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Neisseria meningitidis MC58 # 1 494 1 498 498 893 86.0 0 MSPENQAENTTPSTEKTAKATPPKPSKPKSSVIQIHPEGERIHPKKAEGRFAKLRIAAVL ATQFVFYVIPWFNWSNRQAVLFNIPDRHFFIFGLSLGMGDLIYLALLLMICAFGLFWWTT IAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSPWNFTKIRIKATKYLLIFLV CAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFAAAFYGFMTFFFAHIMREKVCLHMCPY ARFQSAMFDKDTLIISYDTERGEPRGARKKTANKEDSGLGDCINCTMCVQVCPVGIDIRD GLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTEGAMEHEYPESDIKKRLKRPRVAGYG AVLFVVIIAFLTGIATRKMVEVDILKDRGVMVRENSQGWLENAYNLRIINKSEHEQTVTA TVKGFDDIALTGLPENGIKIAPRETVTIPVQVSTLPEYAEKGSQPIEFTFTYRETDAADA EPTVLNEKATFIGE >gi|241321320|gb|ACQV01000003.1| GENE 12 9859 - 10425 544 188 aa, chain + ## HITS:1 COG:NMA1667 KEGG:ns NR:ns ## COG: NMA1667 COG3198 # Protein_GI_number: 15794561 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 179 1 178 182 295 80.0 2e-80 MSQPNSTKPWYKHIWPWVLMAGPIFVVIASVSMFFVAKEHTTDLVSDDYYKDGKHIEIQL HRDEEAVKRQIQVQVLISPDMNAAKVFVSGQFDPKQPLNLLLMHPTRKADDQTVKLRAVT SEPQNGRMEYEAIFKPLPQTNHWYLRVEDTSGVWRVENKWIVSQGNAVNLTPMDKLFDNG KQAASEEQ >gi|241321320|gb|ACQV01000003.1| GENE 13 10499 - 11662 292 387 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 178 382 452 665 904 117 36 2e-25 MIFSNWRRLTENEVRMAKQVFADGIDFSRIKIYRGIPFLPNHNTAIAPNGNIYFPRKHCP DDFTKAGIAYKIWLIHELTHVWQHQRGHKVWLSGLFIMLKGGYRKRKAYAYPMPLPHFNQ LNIEQQADLVAHYFAATYLPKNIYTPQQPIFQTALTDFLHNPHNKALCPRYLSAKKQHSK KPSEQISYNGQSDTSSKRSQTMPWNIPILLTWMRVLLIPVFTILFYLPNTWIQPQTVNWT AAIIFALAAVTDWFDGFLARRWKQTSDFGAFLDPVADKLMVAVALLLLVSLGRTYAIFAM IIIGREITISALREWMAQMGKRGSVAVATIGKFKTTAQMIAIFLLLIGTDKYNDPFYLIG NILMFIASVLTIWSMCYYLKMAWKEFK >gi|241321320|gb|ACQV01000003.1| GENE 14 13049 - 13258 176 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIATQVALLVVVAEKEYLLIWEKHFQKRVTAMAKAINPQIIGKSDQIVLSTATVSSSARP KIKTSNWRS >gi|241321320|gb|ACQV01000003.1| GENE 15 13332 - 14036 365 234 aa, chain + ## HITS:1 COG:Cj1055c KEGG:ns NR:ns ## COG: Cj1055c COG1368 # Protein_GI_number: 15792382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Campylobacter jejuni # 9 224 222 430 657 122 30.0 4e-28 MQISTLPQINKLVPNALISLNWAFAEHRNSNNFIEVTDSDGIELMNRLQNQKADANLNRL FTQTNKNLIVEQHKPNVVFAVMESMSTHLLSLNTPERDLLGELDKHWKEDWVYSRFISEG DGTSDSLHRFFIRSPRLNLSQSAAKNKTFPGNMFKPYLDAGYRIVYITAGNGGWRDFDSF LRHLGVHEIIDENAIKARYPEAQSSTWGVPDEFMFRYAEDELKQAKKIIPPYSS >gi|241321320|gb|ACQV01000003.1| GENE 16 14036 - 14710 155 224 aa, chain + ## HITS:1 COG:Cj1055c KEGG:ns NR:ns ## COG: Cj1055c COG1368 # Protein_GI_number: 15792382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Campylobacter jejuni # 2 170 440 608 657 110 37.0 2e-24 MLSVTNHPPYQLPKPNPTKDFHLTEQEKQRLSSLATGKELNEIFNTFRYSNDQLGRFISH TKSIAPDTIIAATGDHNMRAISYPAPNEIALGHSVPFYLYVPPTYRSNAEYHPERAGSHK DILPTLYNLSLSEIPYYQTGCNLTAPTVDSSWCGYGYNPEVLITKHGFYNLNNQEFHRWD NQGLQTAEAEISQPPAEDIPFIERGSVYTQFLDWQINRIATTHH >gi|241321320|gb|ACQV01000003.1| GENE 17 14810 - 15814 1284 334 aa, chain - ## HITS:1 COG:NMB0828 KEGG:ns NR:ns ## COG: NMB0828 COG0451 # Protein_GI_number: 15676725 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 1 333 1 333 334 652 96.0 0 MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLAECEIAHYLDKHEFIRQ VRGHLLPYDDIEAVFHQGACSDTMNHDGLYMMDNNYQYTLDLLDWCQDERIPFLYASSAA VYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGLTAQVVGFRYFNVYGQQEQHK GRMASVAFHHFHQYREHGYVNLFGANDGYGNGEQTRDFVSVEDVAKVNLYFFDHSELSGI FNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKELVEEELIRYIPFPDALKGKYQSFTQ ADITKLREAGYKEEFLDVKQGVSRYVKWMLENLV >gi|241321320|gb|ACQV01000003.1| GENE 18 15880 - 16842 1269 320 aa, chain - ## HITS:1 COG:NMA1034 KEGG:ns NR:ns ## COG: NMA1034 COG2870 # Protein_GI_number: 15793990 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 1 320 1 320 323 575 92.0 1e-164 MVTKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPVPVAKIARIDQRAGGAA NVARNIASLGGKVGLLSVTGDDEAADALDALMMQDGVSSYLMRDKQIATTVKLRVVARNQ QLIRLDFEESPHREVLEQIKHQYREVLPEYDAIIFSDYGKGGLSHISDMIDWAKQAGKPV LIDPKGDDYEKYAGATLITPNRAELKEVVGSWKNENDLTEKAQNLRRHLDLTAILLTRSE EGMTLFNEADPIYQPTRAQEVYDVSGAGDTVIAGVGLGLAAGYTMHEAMHLANTAAGVVV AKLGTAVCSFTELTKALEEQ >gi|241321320|gb|ACQV01000003.1| GENE 19 16884 - 17036 67 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284800107|ref|ZP_06390536.1| ## NR: gi|284800107|ref|ZP_06390536.1| NAD dependent epimerase/dehydratase family protein [Neisseria subflava NJ9703] # 1 50 105 154 154 90 98.0 4e-17 MLKNQRPLAVEKLAQAMLKAVLLSSHEQASYSKNHMQVYEPQDIFRLLDQ >gi|241321320|gb|ACQV01000003.1| GENE 20 16957 - 17556 195 199 aa, chain - ## HITS:1 COG:ECs4033 KEGG:ns NR:ns ## COG: ECs4033 COG0702 # Protein_GI_number: 15833287 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 2 167 18 179 226 92 37.0 4e-19 MKAIIIGATGATGKSLLPLLAAHSEMERIDCFGRRHPDFSHQKLNSHQIDFTQPNIWHEE VQGDVLFACLGTTLKAAGSKEAQWAIDYEANLEFAKAARENGVHTLVLVSASGANAASRL FYQRMKGELEQALIALNFPCLIIFRPPLLIRPNSDRLGEKSSRTDFSRTQPHRYAEKPTP ACCRKIGASHAESSVVVIS >gi|241321320|gb|ACQV01000003.1| GENE 21 17570 - 18301 941 243 aa, chain - ## HITS:1 COG:NMB0824 KEGG:ns NR:ns ## COG: NMB0824 COG0284 # Protein_GI_number: 15676722 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 242 1 242 246 437 97.0 1e-123 MNPLISDFQTQQQRTPVIVALDFANEKDTLGFVRNLDPTLCQIKIGKELFTATGRSLAES LINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASGGRRMMEAAAEAVAGYQTQ PLLIGVTVLTSMEQSDLAEIGLNIAPEEQVIRLAKLAQSSGLDGVVCSAQEAAPLRRELG QDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYLVMGRPVTKAADPVAVLREVNRV ANA >gi|241321320|gb|ACQV01000003.1| GENE 22 18411 - 19058 1125 215 aa, chain - ## HITS:1 COG:NMA1032 KEGG:ns NR:ns ## COG: NMA1032 COG0563 # Protein_GI_number: 15793988 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Neisseria meningitidis Z2491 # 1 215 1 215 215 392 98.0 1e-109 MKVLLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVR DDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVDLDAVVEIDVPDSVIVDRM SGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVD FYSKLEGEHAPKYIKVDGTQPVEAVKAEVLKGLGK >gi|241321320|gb|ACQV01000003.1| GENE 23 19139 - 19648 761 169 aa, chain - ## HITS:1 COG:no KEGG:NMC0625 NR:ns ## KEGG: NMC0625 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 5 102 9 106 133 157 76.0 1e-37 MNDLRHLSREEQKLLADVAKLVREDEQEFNYDMLKIEAPEQASGEFWFRMAEMLSTLPPN QSLDLRMNGGRLTVAVSILSVLLQDNPDIPQLWAQKIIALNYLAHGHQTRAIGLAQQPDK AAEANEEEYLAKALSQNLLSTLKDAIERFPEDSWFIEMRDDAWKHFGAE >gi|241321320|gb|ACQV01000003.1| GENE 24 19660 - 20421 988 253 aa, chain - ## HITS:1 COG:NMB0675 KEGG:ns NR:ns ## COG: NMB0675 COG1212 # Protein_GI_number: 15676573 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Neisseria meningitidis MC58 # 1 253 1 253 253 430 90.0 1e-120 MAEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAARVVVATDHPDIQTACQ AHGVEVVMTSNQHESGTTRLAEAANTLKLPQHLIVVNVQGDEPLIDPELINRTAEVLVEN NVQMATAAHELHDFDEFMNPNVVKVILDKNRNAIYFSRAPIPYPRDVMRSEKRELPSETA VLRHIGIYAYRAGFLQRYSEMDVSPLETIESLEQLRVLWHGYPIAVEITQEAPAAGVDTQ EDLDRVRAVFEAV >gi|241321320|gb|ACQV01000003.1| GENE 25 20400 - 20600 423 66 aa, chain - ## HITS:1 COG:NMA0874 KEGG:ns NR:ns ## COG: NMA0874 COG2835 # Protein_GI_number: 15793843 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 60 1 60 60 107 96.0 5e-24 MEKKFLDILVCPVTKGKLEYHQDKQELWSRQAKLAYPIRDGIPYMLENEARALSEEELKA WPNLSY >gi|241321320|gb|ACQV01000003.1| GENE 26 20855 - 21280 394 141 aa, chain - ## HITS:1 COG:NMA0873 KEGG:ns NR:ns ## COG: NMA0873 COG3184 # Protein_GI_number: 15793842 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 139 3 140 195 94 37.0 6e-20 MKLKTLLLPFAILALCANAFAAPPSDASLERLFEVQKMDALLDQSLQSVGGIVLSDPKIQ DFLKDVPKDKRPQLEEVLKKYTNQLINEINALQENTQVHKAALDGIKAVYTQEEVNRLID FYGTAVGQLYLLKRRAILRSQ >gi|241321320|gb|ACQV01000003.1| GENE 27 21327 - 21776 351 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758523|ref|ZP_04756642.1| ## NR: gi|241758523|ref|ZP_04756642.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 149 1 149 149 271 100.0 9e-72 MKAVISRYMKNMQDDLSRPELKKQWLDEEKRAVQKVFTQEEVDVLNRFFSSPRGKGILKK INHLRQHGGDIDNVLSQADVDSMAKLFEHGAGKSAFEKMERFDKLNDEIVEKTMSNNYIN ASRKYTPAFKAQTRDILCKGNKHSSECAK >gi|241321320|gb|ACQV01000003.1| GENE 28 21777 - 21992 207 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261381163|ref|ZP_05985736.1| ## NR: gi|261381163|ref|ZP_05985736.1| putative periplasmic protein [Neisseria subflava NJ9703] # 1 70 1 70 221 119 97.0 5e-26 MKLKYLLVACAALFVSTQSLAAKPSDESAMKWLEIQGISNNYSEKVQRSLEMVNKEDNER LLTMTPKAQKV >gi|241321320|gb|ACQV01000003.1| GENE 29 22057 - 23067 395 336 aa, chain - ## HITS:1 COG:NMB0672 KEGG:ns NR:ns ## COG: NMB0672 COG1663 # Protein_GI_number: 15676570 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Neisseria meningitidis MC58 # 3 330 6 333 344 516 82.0 1e-146 MPKFHQIIERHWQSPNPFLSLLLKPLSKLFAKIAAKRRDDFVSGRLKSEKLPVPVVVVGN IHAGGTGKTPIVAALVSGLQEKDIKVGIISRGYGRKSKAVHVLNTASSAADAGDEPLLLF RQTGAPTAVGSSRAEAGRALLAAHPELELIVADDGLQHYALQRDMEIAVFPAVDTGRTNL DLLPNGSLREPLSRLASVDAVVVSGGKADMAFRPSENMFASHIETGRIYRLNRPSEKLDL AGLGNQTVAAVAGIAKPERFFNTLQSMNIALKQTVALPDHADITAADLPNADVVIITEKD AVKFSDGHGLNHVWVLPVYAIIEPDLAAFVSANVSI >gi|241321320|gb|ACQV01000003.1| GENE 30 23249 - 24598 1516 449 aa, chain + ## HITS:1 COG:NMB1363 KEGG:ns NR:ns ## COG: NMB1363 COG1570 # Protein_GI_number: 15677228 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Neisseria meningitidis MC58 # 1 449 1 449 451 795 91.0 0 MSELFAPSSISVSELNALAKALLEDHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRC AMFKGAAMRLAQPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQ LQAEGAFSAERKKPLPARPKCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTG SELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPVVSGVGHET DFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKFDWLA RQIRHPRQKLDEQRASISKLAQMLSYSMTQNLRTHTARFERQTQTLKHCRPDVSVYKNNI DRFQTALSHSFRQLLFHRRQSLTAQAALLEAISPQHILERGFSVVKNTRGQVIRNADMLK QGQKLHITFADGETDVRVTKEQAQGELFD >gi|241321320|gb|ACQV01000003.1| GENE 31 24722 - 25501 972 259 aa, chain + ## HITS:1 COG:NMA1532 KEGG:ns NR:ns ## COG: NMA1532 COG1183 # Protein_GI_number: 15794425 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Neisseria meningitidis Z2491 # 13 251 8 246 248 409 90.0 1e-114 MDNAQNTENPIPPRNSIRKNSIYLLPNSFTIAALFCAFFAITQSMHGRYETAAIAVFLSM LLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQFGKIGYSVAFIYC ACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVERFPNVHWWALGITLF AGISMIVQIPFWSFKEINIRRQVPFMGMVLAVLILLLINWEPSLVLFLFFLGYSLSGYVM AIIRWFKKRHKTHKHDKAV >gi|241321320|gb|ACQV01000003.1| GENE 32 25503 - 26312 902 269 aa, chain + ## HITS:1 COG:NMA1533 KEGG:ns NR:ns ## COG: NMA1533 COG0730 # Protein_GI_number: 15794426 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 268 1 268 268 334 72.0 1e-91 MWSWDIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGIGDHPYAQHLAIGTSF AVMVFTTFSSMYAQHKKHAIDWATVRRTTPGMILGVLLGAATAKYMPTLALQVFFIAFLA FIALKTLRDSKPKPSRTLPALPGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPAHRA IGTSSGLAWPIAIAGTIGYFANGLHIANLPEGAAGFIYLPAVAILSVATILFAPLGVKTA HKLPARKLKIAFGIMLLLIAAKMAWNLIH >gi|241321320|gb|ACQV01000003.1| GENE 33 26399 - 27079 513 226 aa, chain - ## HITS:1 COG:NMB0759 KEGG:ns NR:ns ## COG: NMB0759 COG2836 # Protein_GI_number: 15676657 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 220 21 240 242 270 75.0 2e-72 MNQEITFLTLFLLGFFGGTHCVGMCGGLSSAFALQLPPHLNRIGLIVLLNLGRISSYVVI GLLVGLVGQVGISLDDTRAVQNGLYIAANVLLLLLGLYLAGISTAATKIERIGKPIWKRL NPLLNKLLPIKSIPACFGVGVLWGWLPCGLVYSASLYALGSGNALHGGLYMLAFALGTLP NLLAMGIFAAQLKTFLQKRMVRLCAGLLVAGWAIWRLAVFAMGQIG >gi|241321320|gb|ACQV01000003.1| GENE 34 27190 - 28218 1351 342 aa, chain - ## HITS:1 COG:RSc1175 KEGG:ns NR:ns ## COG: RSc1175 COG4239 # Protein_GI_number: 17545894 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 12 339 31 358 374 381 60.0 1e-106 MKKKKSTSNPTWQAFKQHKRGWLALRILAVLFVVTLLAPLWSNDKPLWIRYQGEYFFPLV NEYNETTFGGDFDTPADYLDPLIRHNITSDGNFALYLPNPYDADTLNDFDTAPDPAKPSE RHILGTDDRGRDLLARLVYGFRDSLLFALVLTVVTTVIGVVAGAVQGYFGGKTDLLMQRF IEVWGGMPELYLLIILSSFFNPGLLILLVLLSLFGWMGLSDYVRAEFLKNRQTDYVLAAR AMGVGNREIMWRHILPNSLTPVLAFLPFRISGAVLALTSLDFLGLGVPASQASLGELLAQ GKDNLDAWWIGLSAVATLTVMLLLLVMIGEGLRQAFDVRARS >gi|241321320|gb|ACQV01000003.1| GENE 35 28267 - 29322 1130 351 aa, chain - ## HITS:1 COG:RSc1174 KEGG:ns NR:ns ## COG: RSc1174 COG4174 # Protein_GI_number: 17545893 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 1 349 1 348 351 424 65.0 1e-118 MWRYIFHRLLLLIPTLLGILAITFAVIQFVPGGPVEQMVQQLTQGAVGGETAGHSMPGTL AKNGNRISAEDLAALNALYGFDKPPVTRFVDMVWKFARFDLGESFFHHQTVFELVKEKMP VSMSLGLWTFFLTYLICIPLGIAKAVRDGSRFDTITGMVILVGYTVPPFVLGLVLLVLFG GGSFFAWFPQGGLVGDDFDTLSWAGKVKDYLWHMALPITASVAGNLAVMTVLTKNVFLEE IRRQYVYTARAKGLPEKQILWKHIFRNAMIPLITGFPAAFIGAFFTGSLLVETLFSLDGL GLLSYEAVMKRDYPVVMGTLYVFTLMGLLAKLVSDISYSWVDPRIHFGGQK >gi|241321320|gb|ACQV01000003.1| GENE 36 29422 - 30351 1375 309 aa, chain - ## HITS:1 COG:NMA1470 KEGG:ns NR:ns ## COG: NMA1470 COG0523 # Protein_GI_number: 15794371 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 603 95.0 1e-172 MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEFGEIGIDGAVLSDNGIP VAEIAGGCLCCTAGAQMGTTVQKMLRDAQPDRLMIEASGLAHAASVIDELKAKPLDSMLE IGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTDLCTPEQLAEFHDKAAKLFPP KAKVVEVQNAQLDIQWLDIPVVEKSRYRLKALPDNTMGFQSQGFTFPAGRDFDGEKLTDF FNDLPKFTDGLVRAKGVFQVLGTWVWLNWVDGQWGANQVSWRRDSRFELIAKSFDADLIE KKLQEALEK >gi|241321320|gb|ACQV01000003.1| GENE 37 30339 - 30812 518 157 aa, chain - ## HITS:1 COG:NMA1471 KEGG:ns NR:ns ## COG: NMA1471 COG0735 # Protein_GI_number: 15794372 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 5 157 6 158 158 262 93.0 2e-70 MNAIKQKILEQAQSDGVQVTALREQVLDIVLKQSGVIKAYNVLSQMQQQSEGVVAPPTAY RALDFWAEQGVLHKVAAVNGYILCSHAQHECNDHCHDHEEAEAHHSAFILVCTECGTADE QTLSQEWAALRAGVAETGFSLKEEHVVLTGICKKCQK >gi|241321320|gb|ACQV01000003.1| GENE 38 30926 - 31750 1070 274 aa, chain - ## HITS:1 COG:NMB0924 KEGG:ns NR:ns ## COG: NMB0924 COG4221 # Protein_GI_number: 15676819 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Neisseria meningitidis MC58 # 1 274 1 273 273 454 79.0 1e-128 MAILITGASAGFGAAMCRTFVAAGYHVIGAARREDKLQQLAEELGEQFYPLEMDVSRTES IQNALNSLPEHLSEIDCLINNAGLALGLDSADKADFGDWETMIQTNIIGLTFLTRQILPQ MVARKQGYIINLGSIAGSYAYSGSNVYGATKAFVRQFSMNLRAELADKNIRITNIEPGLC GDTEFSNVRFKGDDQRAAEVYENVEFIQPQDIADTALWLYQRPARMNVNSIEIMPVAQTF AGMKVYRDEPAPVKEETFEKQSMSLFRKIKSWFK >gi|241321320|gb|ACQV01000003.1| GENE 39 31883 - 32344 844 153 aa, chain + ## HITS:1 COG:NMB0923 KEGG:ns NR:ns ## COG: NMB0923 COG3909 # Protein_GI_number: 15676818 # Func_class: C Energy production and conversion # Function: Cytochrome c556 # Organism: Neisseria meningitidis MC58 # 20 153 19 152 152 208 87.0 3e-54 MKTRFLPVALATVVLTLSACGGSGAPSQPKGPISEDRTAAFKSMMPEFTRMGKMVKDEEP YDVEKFKQAAATFAENSKKPFTLFESDPQGNGRALPAIWTDTAAFKAEEEKFVAAVEKLN AAAQTGKLEEIKAAYGETGATCKSCHDTFRGPE >gi|241321320|gb|ACQV01000003.1| GENE 40 32732 - 35494 2611 920 aa, chain + ## HITS:1 COG:NMA1700 KEGG:ns NR:ns ## COG: NMA1700 COG1629 # Protein_GI_number: 15794593 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 920 1 922 922 1159 62.0 0 MNPNFKLNLLTLSLLAITSIAHAEDEVSTQELDEIQVKGRHIAKEKKIFTEGQAKSSRER VYQSSENIDAIVRSMPGVFTQQDKGSGVLAVNIRGDSGLGRVNTMVDGVTQTFYSTSADA GRSGSSSQFGTALDPNFIAGVDVTKGSFTGANGINALSGTANFRTLRVDDVVHGNNTFGL LTKGLTGTNSTKSNFMATGAAQKWFDSGARLGALYGYSHRNVEQNYKVGGGGQRIGNFGE EYLDHKKQEYFESNLLKFDQGQNRWVRDFSKRNAAGKSYWDYPFSKKYNDPEVLQREYVD DLERGWKENLAPQWDLTPIDPTSLQQRSNSHLVKVEYENDNNKLDLQLRTMNNRIGSRKV ENRNYQANYNLNIGDYVDLNVLAAHNLGKQKYPKNSRFSGWGLLDYLETKNTANLLDINN SFSFKLPQKTDLKATVGFNFFKNQYSKNRFPEELSLFYNGPDQDAGLYSFLGRFKGDKGI FPQKSTILQPSGQQKFNTFYFDTSLKKGIYQLNYSANMVNYRYKGEYTDYFNTQEDFKKA FGEDSEIYKQHCTPSCDLYEPVYTKSGKKHAVNHSVALNINVNDYFMPFISYSRTHRMPN IQEMYFSQIGDSGVNTALKPEQANTYQIGFNTFKKGIFKPDDVLGFKLVAYRSRINNYIH NVYGKWWDLDKAPSWVTSTGLKYSIQHRNYAKPVHKNGLEVEMNYDFGRFFTTLSYAYQK TNQPTNYSDASESPRNSSKEDQIKQGYGLSKISRLPRDYGRFELGSRWLGNKLTVGGIMR YYGKSTRATTEEEFVDGTTGDNTYSSWKTGGRVIKKTESINRQPLIFDFYANYEPKKNLI LRFDIQNAFNKRYIDPLDAANDAATQRYFSVFERKGGLDDEEVECDADGLCNGKYGGTTR SVLNNYARGRTLLFTISYKF >gi|241321320|gb|ACQV01000003.1| GENE 41 35644 - 36840 2004 398 aa, chain - ## HITS:1 COG:NMB1518 KEGG:ns NR:ns ## COG: NMB1518 COG0282 # Protein_GI_number: 15677371 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis MC58 # 1 398 1 398 398 731 94.0 0 MTQKLILVLNCGSSSLKGAVLDNDSGEVLLSCLAEKLNLPDAYITFKFNGEKHKVDLSAK PDHTGAVEALMEELKAHGLDTRIGAIGHRVVSGGELYSESILVTDDVIAGIEKCIPLAPL HNPAHLLGLRAAQSIFKGLPNVVVFDTAFHQTMPEHAYKYAVPHELYEKYGLRRYGAHGT SYRFVSDETARFLGKDKKDLRMVIAHLGNGASIAAVANGECKDTSMGLTPLEGLVMGTRS GDIDPSVFSFLAENANMTISQITEMLNKKSGLLGISGLSNDCRTIEEEAANGHAGAKLAL EIFIYRLAKYIGSMAVAAGGLDALVFTGGIGENSDIIRERVLGYLGFLGLHIDQEANLKA RFGNAGVITTADSKAVAVVIPTNEELMIAHDTARLSGL >gi|241321320|gb|ACQV01000003.1| GENE 42 37129 - 37380 410 83 aa, chain + ## HITS:1 COG:no KEGG:NMC1446 NR:ns ## KEGG: NMC1446 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 83 19 99 99 123 71.0 2e-27 MLADDESQNPPQSGRFAIKLQSEDAAEAAVLSPFEQTDIPQYWRVVKDRIELFFDDKNIG ALRNEYLTISGKTFILTDLTGAM >gi|241321320|gb|ACQV01000003.1| GENE 43 37380 - 37568 303 62 aa, chain + ## HITS:1 COG:NMA1716 KEGG:ns NR:ns ## COG: NMA1716 COG3197 # Protein_GI_number: 15794609 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein, possibly involved in nitrogen fixation # Organism: Neisseria meningitidis Z2491 # 1 61 2 62 62 101 85.0 3e-22 MESMFILVPISIILAFIIGWFFWWSGKNGQFDDLEGPAHRILMDDDSTEKLIEKDEDKES KQ >gi|241321320|gb|ACQV01000003.1| GENE 44 37565 - 38881 1633 438 aa, chain + ## HITS:1 COG:NMB1515 KEGG:ns NR:ns ## COG: NMB1515 COG0477 # Protein_GI_number: 15677368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 428 1 428 436 642 80.0 0 MSLKKDNLNFHATRRFAPLFGTQFLGAFNDNMFKTALFVMISFYGLGKNDFLPPSQMLNL GAMLFILPYFLFSALSGQLSNKFDKAVLARWIKLLEIIIMAVAAYGFYIQSAPLLLICLF CMGTQSTLFGPLKYAILPDYLNDKELIMGNSLIESGTFIAILLGQLLGTAVAGVPPYIVG GLVLLVAVGGTMTSLFMPSVPAKMPDTKIEWNIIKGTNLLIREAAADRPVFTSIIGISWF WFIGSVYTTQLPTFTQIHLGGNDNVFNLMLALFSIGIAIGSVLCAKLSHERLILGLVTIG TLGLTVCGLLLVWLTHGQRFTELNGIIWFLSQAQAYPIMLVMSAIGFFGGFFSVPLYTWL QTASSETFRAHAVAANNIINGVFMVSAAILSTVLLMLFDSITLLYLIVAVGNLPLIVYLI KQEPKFIGDLNALLKISK >gi|241321320|gb|ACQV01000003.1| GENE 45 39204 - 40184 932 326 aa, chain + ## HITS:1 COG:NMA0980 KEGG:ns NR:ns ## COG: NMA0980 COG0470 # Protein_GI_number: 15793937 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Neisseria meningitidis Z2491 # 1 321 1 320 325 442 66.0 1e-124 MIYPWHETQWQQLAAHWQNRPNAWLFTGKENTGKTEFARFVAQALLCESPKSGHEPCGEC ASCHLFSQNTHPDFYELTPEIPEGEATGRKLLQIKIDAVRDIVENIYLTAVRGGLRVVLV HPAESMNTQAANGLLKALEEPPQHVVFLLVTHARDKLLPTIKSRCRQMVLPSPTHAQAAA YLRQQGVENAEALLAFHSGAPLFTPTPELDALREELLTLLAAPRLLAILDYAAAFDKQKQ PLAVFIDWLQKWLMDVGLAQQNMAPLYYPHHAQALLQTASKTDSRKLFALLGRLNALNPY GYHTLSVKMQLEYLLIEYLDFWQNKP >gi|241321320|gb|ACQV01000003.1| GENE 46 40198 - 40548 634 116 aa, chain + ## HITS:1 COG:NMA0981 KEGG:ns NR:ns ## COG: NMA0981 COG3215 # Protein_GI_number: 15793938 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilZ # Organism: Neisseria meningitidis Z2491 # 4 116 5 116 116 168 69.0 3e-42 MNKKDIPAKMLALQLKDPNLLYNCYMPFLEHGGLFVPTDDVFSLGEDILLAVEIADYPKR FLPTKVVWINPARTSAHRPKGVGLAFSEHESCLQAKNLIEAELGPRLRSDRTTFTL >gi|241321320|gb|ACQV01000003.1| GENE 47 40553 - 41338 931 261 aa, chain + ## HITS:1 COG:NMB0771 KEGG:ns NR:ns ## COG: NMB0771 COG0084 # Protein_GI_number: 15676669 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis MC58 # 1 257 1 257 259 443 78.0 1e-124 MYLIDSHCHLNFDGLKDRLPEVFANMEAQSVKQALAISVSKQSFAEVFDIAQANDHIYCT IGIHPDSQEAEEFTIAEMVEAAKHPKIVGIGETGLDYYWCKGDLSWQHQRFADHIQAANE SGLPVIVHTRDAAEDTLRILKECHTNSGVIHCFSEDVAFAKAALDLGMYISFSGIVTFKN APLIQEAAKYVPADRILVETDAPFLAPVPKRGKQNEPSYVRYTAEFLANLRGESLETLAQ NTSDNFYRLFNKVPDGRLNNG >gi|241321320|gb|ACQV01000003.1| GENE 48 41705 - 43213 2132 502 aa, chain + ## HITS:1 COG:NMA1482 KEGG:ns NR:ns ## COG: NMA1482 COG0318 # Protein_GI_number: 15794382 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis Z2491 # 1 500 11 513 517 815 78.0 0 MLTAACQKNGKGTVIFNDKEKISYSSLKREVETVAAYLQHQGVQFGDRVALVVSNSPEFI AAYFAITSIGAVAVPLNVFLKSEEFSYILNDCGARFMFASAPLAKELKNIKAKTKINKII WIGETNAASGDDSYFDAAHTFPGKPNLSRQPSANDLAHIIYTSGTTGHPKGALISYSNLF SNLSGIEQIFQISQKDRFVVFLPMFHSFTLTAMVLLPIYQACSIILVKSVFPFSNVLKQV LLKRATIFLGVPAIYTAMSKAKIPWYFRWFNRVRLFISGGAPLAGQTIDDFKAKFPRAKL LEGYGLSECSPVVAVNTPERQKTASVGVALPGLTVKAVDDELIEVPRGEVGELIIKGGSV MQGYLNMPDATDETIVNGWLKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEAI YKLDAVEAAAVIGVKDQYADEEIIAFIQLKEGMKLEEAEVRSHLRGLLANFKIPKQVIFQ DELPRNATGKVLKRKLKEQFQD >gi|241321320|gb|ACQV01000003.1| GENE 49 43297 - 44862 211 521 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 261 490 1 223 312 85 29 4e-16 MTTPILEIENLNGSFPSKQVLHDINLTLQPGRKLALVGESGSGKTVLSQGIMRLNPMVTF EGRLKYCGTDLLTQPERALQKLRGREIGMVFQEPMTALNPVMRVGEQIAEVLSLHLGLDK KQAWARAIELLDETGIHQPEQKAQAYPFQLSGGQRQRAMIAMAVSAQPKLLIADEPTTAL DVAVQAQILDLLSRLQEEHGMTMLYITHDLNLVRRFADDVAVMRNGRILETGKAAEVFAN PQHEYTKMLLNAGTTRRVAPLPENPATVLKAEQIAFSVKESDGWFKKRDKTILNPISFDL KSGETLGIIGESGCGKTTLAKAVMHLIDSEGSLNINGEPWRHELRREIQMVFQDPFGAFN PRMNVFDTVSEALRVHEPSMPREEMRRRVEEVLKQVGLPEDALERYPHAFSGGQRQRLAI ARAIIVRPKILVLDEPTSALDVQWQQQILELLSGLQKEYGLAFIIISHDLAVIRAISHRV MVLKDGKIVEEGECENVFANPSSDYTCHLIAHSGHMVQEAV >gi|241321320|gb|ACQV01000003.1| GENE 50 44988 - 45320 591 110 aa, chain + ## HITS:1 COG:NMA1578 KEGG:ns NR:ns ## COG: NMA1578 COG0526 # Protein_GI_number: 15794471 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 110 1 110 110 198 88.0 2e-51 MSSELIIHASDASFEQDVLKSDVPVLLDFWAPWCGPCKMIAPILDDIASEFQGRLKVVKI NIDENEVTPAKFGVRGIPTLMVFKNGKNVATKVGALAKGQLTAFVEASIA Prediction of potential genes in microbial genomes Time: Thu May 26 11:18:49 2011 Seq name: gi|241321308|gb|ACQV01000004.1| Neisseria flavescens SK114 ctg1118407793858, whole genome shotgun sequence Length of sequence - 4534 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1628 4818 ## COG5295 Autotransporter adhesin + Term 1677 - 1718 8.4 - Term 1794 - 1841 16.6 2 2 Tu 1 . - CDS 1867 - 2871 1097 ## COG0042 tRNA-dihydrouridine synthase - Prom 2892 - 2951 7.7 + Prom 2998 - 3057 4.7 3 3 Op 1 . + CDS 3089 - 3709 783 ## COG0009 Putative translation factor (SUA5) 4 3 Op 2 . + CDS 3767 - 4532 450 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|241321308|gb|ACQV01000004.1| GENE 1 3 - 1628 4818 541 aa, chain + ## HITS:1 COG:NMB0992 KEGG:ns NR:ns ## COG: NMB0992 COG5295 # Protein_GI_number: 15676883 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Neisseria meningitidis MC58 # 431 541 481 591 591 111 69.0 5e-24 GPKGEKGDTGAAGEKGEKGDTGATGAKGDTGATGATGATGATGATGATGATGAKGDTGAT GATGAKGDTGATGAKGDTGATGATGATGATGATGATGAKGDTGATGATGAKGDTGATGAT GAKGDTGAKGDTGATGDKGEKGDTGVTGATGATGATGAKGDTGATGATGATGATGATGAT GATGATGATGAKGDTGATGATGATGATGAKGDTGAKGDTGAKGDTGATGATGATGAKGDT GATGATGATGATGAKGDTGATGAKGDTGATGATGATGAKGDTGENGKSAEGKVERDEAKG TSTITINNFDKDGKVISTTTATVKDGKDGKDADGTFGLVDETGTTDGSISKKLNNTIQIK GDAGTKVQVFDKATGKTSEKEVQNIFVKKDGDALKASLNPDLTVNSVTTNELKAGPVTIN KDGIDAGNTTIKNVAPGKNGTDAVNVDQLNQKFGDVNSSVNKVDNNARAGVAQALATAGL PQAYLPGKSMLAIGGSHYRGETGYAVGLSSISDGGHWIIKGTASGNSRGHFGATVAVGYQ W >gi|241321308|gb|ACQV01000004.1| GENE 2 1867 - 2871 1097 334 aa, chain - ## HITS:1 COG:NMA2139 KEGG:ns NR:ns ## COG: NMA2139 COG0042 # Protein_GI_number: 15795010 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis Z2491 # 5 331 7 333 336 590 86.0 1e-168 MSASSLPSRRLSVAPMLDWTDRHYRFMARQITRNAWLYSEMVNSGAVVYGDKDRFLSFNE GEQPVALQLGGSDPHDLAIAAKAAETYGYNEVNLNCGCPSPRVQKGAFGACLMNDVDLVA DCLNAMQDVVEIPVTVKHRIGVDRQTEYQVVADFVGTLREKTACRTFIVHARNAWLDGLS PKENREVPPLKYEYVYRLKQEFPDLEILINGGITTNEEIAEHLKFVDGVMIGREAYHNPM LMRDWDALFYNNTHAPIQYADLAAWLYAYSREQIASGRGTILRHIVRHALGLMHGLKNAR TWRRMLSDATLLKDNDGSLILDAWKEVERANIWD >gi|241321308|gb|ACQV01000004.1| GENE 3 3089 - 3709 783 206 aa, chain + ## HITS:1 COG:NMB0436 KEGG:ns NR:ns ## COG: NMB0436 COG0009 # Protein_GI_number: 15676348 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis MC58 # 1 206 8 213 213 358 88.0 4e-99 MAQFFAIHPDNPQDRLIKQAADIVRGGGVIVYPTDSCYALGCKLGDKNAMERILTIRKID QKHHLTLMCADLSELGTYAKVDNAQFRQLKAATPGSYTFILQATKEVPNRTLHPKRKTIG LRVPDNATALALLQELGEPILSCTLMLPEDDEPLTDPYEIRDRLEHAVDLVIDGGWCGTE PTTVIDMTDGTELIRQGKGDIAVFGL >gi|241321308|gb|ACQV01000004.1| GENE 4 3767 - 4532 450 255 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 255 45 247 263 98 32.0 9e-21 MNMHKNTRLTLHHRQAICLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKVTDKR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTGHLIDPCPYLIECVYSDNGTKYKGSANH AFGVACYENGIGQKFTRVARPQTNGKAERVIRTLMEMWHGKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTP Prediction of potential genes in microbial genomes Time: Thu May 26 11:18:54 2011 Seq name: gi|241321285|gb|ACQV01000005.1| Neisseria flavescens SK114 ctg1118407793877, whole genome shotgun sequence Length of sequence - 15918 bp Number of predicted genes - 17, with homology - 16 Number of transcription units - 8, operones - 6 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 268 - 312 -0.4 1 1 Tu 1 . - CDS 314 - 400 80 ## - Prom 471 - 530 4.7 + Prom 261 - 320 7.2 2 2 Op 1 . + CDS 498 - 692 229 ## gi|225075383|ref|ZP_03718582.1| hypothetical protein NEIFLAOT_00388 3 2 Op 2 . + CDS 665 - 1726 1067 ## ACIAD0355 hypothetical protein 4 2 Op 3 . + CDS 1771 - 2949 1104 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase + Term 2955 - 3003 17.4 - Term 2943 - 2991 17.4 5 3 Op 1 18/0.000 - CDS 3007 - 3936 1028 ## COG1159 GTPase 6 3 Op 2 . - CDS 4001 - 4720 684 ## COG0571 dsRNA-specific ribonuclease - Prom 4760 - 4819 7.8 + Prom 4754 - 4813 6.6 7 4 Op 1 2/0.500 + CDS 4974 - 5297 697 ## COG4859 Uncharacterized protein conserved in bacteria 8 4 Op 2 17/0.000 + CDS 5391 - 5870 846 ## COG0054 Riboflavin synthase beta-chain 9 4 Op 3 . + CDS 5992 - 6420 782 ## COG0781 Transcription termination factor + Term 6495 - 6540 12.6 - Term 6487 - 6523 8.0 10 5 Tu 1 . - CDS 6538 - 6960 459 ## COG4968 Tfp pilus assembly protein PilE - Prom 7076 - 7135 5.7 11 6 Op 1 13/0.000 + CDS 7250 - 8431 1376 ## COG0845 Membrane-fusion protein + Term 8437 - 8491 12.0 12 6 Op 2 3/0.000 + CDS 8513 - 10450 387 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 13 6 Op 3 . + CDS 10490 - 11896 1795 ## COG1538 Outer membrane protein + Prom 11923 - 11982 5.5 14 7 Op 1 1/0.500 + CDS 12009 - 12875 1198 ## COG2354 Uncharacterized protein conserved in bacteria 15 7 Op 2 2/0.500 + CDS 12931 - 14478 1928 ## COG0815 Apolipoprotein N-acyltransferase + Term 14490 - 14521 3.1 + Prom 14641 - 14700 6.5 16 8 Op 1 . + CDS 14758 - 15621 1313 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 17 8 Op 2 . + CDS 15711 - 15918 277 ## gi|255067163|ref|ZP_05319018.1| transposase Predicted protein(s) >gi|241321285|gb|ACQV01000005.1| GENE 1 314 - 400 80 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNVAIKSKATGLFILGYLVYLLNDKIQ >gi|241321285|gb|ACQV01000005.1| GENE 2 498 - 692 229 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225075383|ref|ZP_03718582.1| ## NR: gi|225075383|ref|ZP_03718582.1| hypothetical protein NEIFLAOT_00388 [Neisseria flavescens NRL30031/H210] # 1 61 1 61 409 119 95.0 4e-26 MSNEKIQQKFEQAYHSFIEEENYEEALKRAEILCLLNPQSTEFHHKVAYAYLKQLKWEKP LRLK >gi|241321285|gb|ACQV01000005.1| GENE 3 665 - 1726 1067 353 aa, chain + ## HITS:1 COG:no KEGG:ACIAD0355 NR:ns ## KEGG: ACIAD0355 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 32 350 111 430 435 186 32.0 2e-45 MGKAIEAEMKTPELDSTYIPALDLLAHAYGALDNWEKTGFYGHQALALKDKAIPDLEHEI IPIPAPKNGKRIISFSLFGNNSKYIEPAVLNTQLAPVFFPGWTCRFYVDDSVSAEAIQRF RNNGAEVIKVGAPLDNWPGTMWRFLAINDPEVEYVIFRDADSIICYRDAAAVSEWIKSGT LFHTIRDSGSHTALILAGMWGAKAGAVPDMQERIQNFVDEGYPSRHFADQDFLEKELWAY IRQNLFAHDRLFDFCNAHEIPGEFYPNYQIAFSEGVTSFNATTDCEDGSLAKWTLYSSAS PLVNPDYSLNVVPEFKVCSYVTEVKNGAVSAFLPKRYGNAIKAKLARINIEQI >gi|241321285|gb|ACQV01000005.1| GENE 4 1771 - 2949 1104 392 aa, chain + ## HITS:1 COG:NMB1658 KEGG:ns NR:ns ## COG: NMB1658 COG0452 # Protein_GI_number: 15677507 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Neisseria meningitidis MC58 # 1 392 1 393 394 561 72.0 1e-159 MGKHILLGITGGISAYKSCELVRLLKKQGYSVSVVMTDSATEFVSPLTFQALTGNPVLSD TYSGASNNGMAHINLTREADAFLIAPATANTIAKIANGLADNLLTNLVAARKCPLAVAPA MNVEMWNNPANLRNIEQLVSDGITVFYPNSGEQACGETGTGRMVEAVDLADLLEDLWTPK LLSGKKVLITAGATFEAIDPVRGITNISSGQMGMALARACRAAGAKITLIYGQIQTALPA GLAHFEQAVSAEAMYQAVHRHIHEQDIFISVAAVADYKVKNSSNEKLKKNGNQPPVIELT ENPDILASVAALPSPPFCVGFAAESHQVLEFARAKRLRKNVPMLVANQVSVSMGKPTNQI TIIDDLAETSFPETSKRQAADEIVKRLAELLA >gi|241321285|gb|ACQV01000005.1| GENE 5 3007 - 3936 1028 309 aa, chain - ## HITS:1 COG:NMB0687 KEGG:ns NR:ns ## COG: NMB0687 COG1159 # Protein_GI_number: 15676585 # Func_class: R General function prediction only # Function: GTPase # Organism: Neisseria meningitidis MC58 # 1 309 18 324 324 514 90.0 1e-146 MDIETFLQNESQHPTDYRCGFVAIVGRPNVGKSTLMNHLIGQKISITSKKAQTTRNRVTG IYTDDTAQFVFVDTPGFQTNHRNALNDRLNQNVTEALSGVDVVVFVVEAMRFTDADRVVL KQLPKHTPVVLVVNKIDKDKAKDKFALEAFINEVRQEFEFTASEAVSAKHGLRIANLLEL LKPYLPENIPMYPEDMVTDKSSRFLAMEIVREKLFRYLGEELPYAMNVEVEQFEEEESGL FRIYIAVLVDKDSQKAILIGKGGEKLKKISTEARLDMEKLFDTKVFLKIWVKVKSGWADD IRFLRELGL >gi|241321285|gb|ACQV01000005.1| GENE 6 4001 - 4720 684 239 aa, chain - ## HITS:1 COG:NMB0686 KEGG:ns NR:ns ## COG: NMB0686 COG0571 # Protein_GI_number: 15676584 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 351 81.0 7e-97 MKPDLLKQQAHRAIQKRLGYEFRNMELLQQALTHRSYNAKHNERFEFVGDSILNYSVARM LFDAFPKLSEGELSRMRAALVNEGVLAEIALEMNVGDGLYLGAGELKSGGFRRPSILADA MEAMFAAVSFDADFSAAEKVVRHLFAERVKRADLNIGKKDSKTALQEALQARRFALPKYR IEEQAEQTADAMFVISCDLGELGFICNARGSSRKVAEQKAACEALEWLEQKFPLKKAKK >gi|241321285|gb|ACQV01000005.1| GENE 7 4974 - 5297 697 107 aa, chain + ## HITS:1 COG:NMA0887 KEGG:ns NR:ns ## COG: NMA0887 COG4859 # Protein_GI_number: 15793856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 107 1 107 107 159 78.0 1e-39 MNKFAQALAAALDRCIVTNTVAEQGEPVGFLYREAPVFENDSGWRIFSGDETDEYTDNPD NFSIVSLSAITADNPDIAPLLTQAEGSAWELNEDGEFQAVADWQPQE >gi|241321285|gb|ACQV01000005.1| GENE 8 5391 - 5870 846 159 aa, chain + ## HITS:1 COG:NMA0886 KEGG:ns NR:ns ## COG: NMA0886 COG0054 # Protein_GI_number: 15793855 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 249 86.0 1e-66 MNIIEPRLDGTNLRIGIVQARFTNEIGSEMVKVCCRTLKELGVSEDNITLATVPGALEVP IALMNLASSEQFDALIAIGVVIRGETYHFELVSNESGAGVSRVALDYNIPIANAILTTEN DEQAIARIEEKASDAAKVAVECANLVNHLLSEQYEDDEE >gi|241321285|gb|ACQV01000005.1| GENE 9 5992 - 6420 782 142 aa, chain + ## HITS:1 COG:NMB0683 KEGG:ns NR:ns ## COG: NMB0683 COG0781 # Protein_GI_number: 15676581 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 141 1 141 141 223 80.0 6e-59 MKSPRRRARELAVQAIYQAGINKTAAPEIAKNIHELSQTSNMDEELFNKLFFGTQTHAEE YMEKISPLLDRDEKDLSPIERAVLLVACHELSTMPETPYPVIINEAIEVTKTFGGTDGHK FVNGILDQLASRIRPDEPRRKG >gi|241321285|gb|ACQV01000005.1| GENE 10 6538 - 6960 459 140 aa, chain - ## HITS:1 COG:NMB0547 KEGG:ns NR:ns ## COG: NMB0547 COG4968 # Protein_GI_number: 15676453 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis MC58 # 4 135 5 129 129 133 50.0 1e-31 MKHQQGFTLIELLIVVVIAAILATIAYPSYQNYIRQTRLAAVRTQMLHNAQQLERYYTQK STFVGFPAGNLQQNQYFDISFSEGTASMPNPSDSGYILKAEPNKETNANETCTVYYNDSG IIWANSDKQNCPGYEMPKSE >gi|241321285|gb|ACQV01000005.1| GENE 11 7250 - 8431 1376 393 aa, chain + ## HITS:1 COG:NMA0728 KEGG:ns NR:ns ## COG: NMA0728 COG0845 # Protein_GI_number: 15793704 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 1 393 1 391 392 517 79.0 1e-146 MSKVFKWAAGTAVIVAAVFGGWSLMKPEPQSSFITEVVKRGDIRQTVSATGEISPSNLVS VGAEASGQIKKLYVKLGQQVKKGDLIAEIDSTNQINTLNTEKSKLETYQAKLVSAEIALS SAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISINTAESELGH TRITATMDGTVVAIPVEEGQSVNAAQSTPTIIQLANLETMLNKMQIAEGDITKVKAGQDI SFTILSEPDTPIKAKLDSVDPGLTTMSLGNYTSSTDTTSNAIYYYARALVPNPEGKLSIG MTTQNTIEINGVKNVLLVPTLTVKKHNGKSYVSILGADNKAVEREVTVGLKDSMNTEIKS GLKEGEKVIISEMSADEKNKSSERAMMGGGPPR >gi|241321285|gb|ACQV01000005.1| GENE 12 8513 - 10450 387 645 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 253 642 7 410 413 153 29 6e-37 MSLIECKNINRFFGSGENRVHVLKDISLSIEKGDFVAIIGQSGSGKSTLMNILGCLDTAT SGSYQIDGIETSQMQPDELAALRRERFGFIFQRYNLLSSLTARDNVALPAVYMGMGSKER AERAEKLLGDLGLQNKEGNKPSELSGGQQQRVSIARALMNGGEIIFADEPTGALDTASGK NVMEIIHKLHEDGHTVIMVTHDPGIAANANRVIEIRDGQIISDTSKNPDIPPSKVERIKE KASWSFYYDQFMEAFKMSVQAIMAHKMRSLLTMLGIIIGIASVVSVVALGNGSQQKILED INSMGTNTISIFPGRGFGDRRSGRIKTLTINDAKAISQQSYVASATPQTNSSGTLTYRNT DLTASLYGVGEQYFDVRGLKLEEGRLFDDDDVKTDAQVVVIDQNTKTKLFGEGVDPLGKT ILFKKRPLTVIGIMKKDDNSFGNSDSLMLWSPYTTVMHQITGESHTNSIVVKIKDDANTQ VAEKSLTELLKARHGTEDFFMNNSDSIKEMVESTTGTMTLLISSIAVISLVVGGIGVMNI MLVSVTERTKEIGVRMAIGARRNNILQQFLIEAVLICIIGGLSGVLLSACISLVFNYFVT DFPMSISMTSVIGAVVCSTAIGVAFGFMPANKASKLNPIDALAQD >gi|241321285|gb|ACQV01000005.1| GENE 13 10490 - 11896 1795 468 aa, chain + ## HITS:1 COG:HI1462 KEGG:ns NR:ns ## COG: HI1462 COG1538 # Protein_GI_number: 16273365 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Haemophilus influenzae # 19 465 9 453 454 331 41.0 2e-90 MLLPERFFMKTKPFSQAALSLAVALALSACATPKANPNLTLEATGQVMSAAETAERYDVN GNWWEIYQSPQLNALMEQALANNVDLKQAAISVNKALYQANILGADLVPSFSGSLGANAS KNLKTGSHGNTFSSQLGLSYELDLWRKLSATADAQVWEYQATHEDMANTRLTLINNVADA YFNIAYLNEAIELAKKSLKQYQEINRIANAKFRYGRADSSQPTQAKQSLLSAENSLLSLQ NNLDTQKQVLRNLLNLRPSENMAADPAQFRLLPVKGVNLDVPITVLANRPDLRAAEYRLQ ASQQSVNAQKRSWYPSITLGASLSTSSDKAKSTFNIPMLGGSATINLPFLNWQTMKWKDK TVQAEMDSAKLNFEKALTTALNEVNTNYLAYKNAQASLANQEQRYQLDKKNSHYYQVRYQ HGKNELKDWLEALNSEYSSAQNLLNQRYEALKYENMVYKAMAGRYTPK >gi|241321285|gb|ACQV01000005.1| GENE 14 12009 - 12875 1198 288 aa, chain + ## HITS:1 COG:STM1989 KEGG:ns NR:ns ## COG: STM1989 COG2354 # Protein_GI_number: 16765325 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 284 1 298 303 277 55.0 2e-74 MAFASLFTLLDDITAVLDDVAMMTKVAVKKTAGVVGDDLALNANQVTGVSAERELPIIWA VAKGSLVNKLILVPLALLLSAFLPALITPLLMIGGVYLCFEGVEKLLHKFLHRDEHEDGH DAESEVTDEKTKVKGAVRTDFILSAEIIIIALGVVEKYDLMTRSLVMAAIGVGMTVLVYG LVGIIVKLDDLGMMLMRQKSAAVQGIGRGLISFMPWFMRGLSIVGTLAMFLVGGGLIAHN LGFLHDFLHAQHWDSGMMEHIANLVVGVAAGALACAIVLPAMKLFQKD >gi|241321285|gb|ACQV01000005.1| GENE 15 12931 - 14478 1928 515 aa, chain + ## HITS:1 COG:NMB0713 KEGG:ns NR:ns ## COG: NMB0713 COG0815 # Protein_GI_number: 15676611 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Neisseria meningitidis MC58 # 1 513 11 523 524 801 76.0 0 MNIFRKLEQYWQHPLLYWPLVILIAAATPFTFAPYYHFWLMPLLFGALIRLIELRPRFAV MTAYLFGLIGYTAQFYWIHTALHDVSGLPDSYAIPLTFLLPAFLALYPAICFWVWRKCNL SRWAKTGLLLPILWTLAEFARERFLTGFGWGAIGYSQIIKDSPLAGFAPLGGIHMVTLAT AFLSAWLVLLIDNHGRLKHRLLPLFLIVALCSVGYISQQTEYTRPDGSTSTVALIQGNIE QNLKWKEEQIIPTIQKYYEQISKTSADIVILPETALPLMRQDLPEGILEQFTEQAQSNGS ALAIGISQYTPDGNGYENAVINLSEYHNSTSDVIPYYAKNHLVPFGEYKPLPAITERLYK MMDMPLADFQKGGDNQAPLVMKDQKVAFNICYEDGFGDELIATAKRSTLLANISNMAWYG KSNAMYQQLQQSQARAMELGRYMVRATNTGATAIISPKGTIVAEAQPNTETVLEGHVKGY IGETPYMKAGGSTWLISILAIIGVFLILIGRKKPE >gi|241321285|gb|ACQV01000005.1| GENE 16 14758 - 15621 1313 287 aa, chain + ## HITS:1 COG:NMB0712 KEGG:ns NR:ns ## COG: NMB0712 COG0568 # Protein_GI_number: 15676610 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis MC58 # 1 287 4 290 290 513 94.0 1e-145 MNKAFALPVIHSGNGSLEQYIHTVNSIPMLTAEEETQLAERQQKGDLNAAKQLILSHLRV VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPSRGARLFSFAVHWIKAEIHEFILRN WRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQEIANDLGVKLSEVLEMEQRMTGHDI GIMAENNDDEDNFAPIDWLADHDAEPSRQLSKQAHYALQTEGLQNALAQLDDRSRRIVES RWLQDDGGLTLHELAAEYGVSAERIRQIEAKAMQKLRGFLAEEAEAV >gi|241321285|gb|ACQV01000005.1| GENE 17 15711 - 15918 277 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 69 251 319 366 149 97.0 4e-35 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT EHRKNPFIA Prediction of potential genes in microbial genomes Time: Thu May 26 11:19:14 2011 Seq name: gi|241321274|gb|ACQV01000006.1| Neisseria flavescens SK114 ctg1118407793806, whole genome shotgun sequence Length of sequence - 5013 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 215 - 811 676 ## NMC1074 hypothetical protein - Prom 981 - 1040 9.8 + Prom 879 - 938 7.9 2 2 Tu 1 . + CDS 1129 - 1326 548 ## COG2975 Uncharacterized protein conserved in bacteria + Term 1353 - 1398 12.1 + Prom 1403 - 1462 7.2 3 3 Op 1 9/0.000 + CDS 1499 - 2380 1362 ## COG0685 5,10-methylenetetrahydrofolate reductase 4 3 Op 2 . + CDS 2470 - 4746 3321 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 4756 - 4806 14.7 5 4 Tu 1 . + CDS 4868 - 5012 221 ## gi|241760517|ref|ZP_04758610.1| integrase, catalytic domain Predicted protein(s) >gi|241321274|gb|ACQV01000006.1| GENE 1 215 - 811 676 198 aa, chain - ## HITS:1 COG:no KEGG:NMC1074 NR:ns ## KEGG: NMC1074 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 135 1 134 195 92 39.0 8e-18 MNNALNAKLSKLIYALASDDPEYLSKAGAFDRLLLLVREFYRMLDETEGLKQLVFRLYYG KHYGLIKLDAASPNDDAGALRLKRWMVYSRIAERIENCGKHLSVVLEDAVLENGADKSHY IDEANAIIERFGLVRDEAALSAIEAAEALKAEQELQATSEPKKSAPKHHGNLHQIRIQTL SVPTLEPKGFEFCCLYRF >gi|241321274|gb|ACQV01000006.1| GENE 2 1129 - 1326 548 65 aa, chain + ## HITS:1 COG:NMA1347 KEGG:ns NR:ns ## COG: NMA1347 COG2975 # Protein_GI_number: 15794269 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 65 1 65 65 112 95.0 1e-25 MKWTDTQRIAEELYDLHGDSIDPKTVRFTQLRDLIMALPEFDDDPARCGERILEAVQQAW IDEAE >gi|241321274|gb|ACQV01000006.1| GENE 3 1499 - 2380 1362 293 aa, chain + ## HITS:1 COG:NMA1139 KEGG:ns NR:ns ## COG: NMA1139 COG0685 # Protein_GI_number: 15794085 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Neisseria meningitidis Z2491 # 1 292 1 292 292 594 97.0 1e-170 MNHAREINALNHSLSDLKGDINVSFEFFPPKNEQMETMLWDSIHRLQTLHPKFVSVTYGA NSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAKDYWDSGIRRIVALRGDEP PGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSAQADLINLKRKIDAGANHVIT QFFFDVESYLRFRDRCVMMGIDVEIVPGILPVTNFKQLAKMAQVTNVKIPSWLSKMYEGL DDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLNRSELTYAICHILGVRPR >gi|241321274|gb|ACQV01000006.1| GENE 4 2470 - 4746 3321 758 aa, chain + ## HITS:1 COG:NMA1140 KEGG:ns NR:ns ## COG: NMA1140 COG0620 # Protein_GI_number: 15794086 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Neisseria meningitidis Z2491 # 1 758 1 758 758 1505 99.0 0 MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLREKNWKHQAAANADFVAA GDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGNKDQFAIEMTKWFDTNYHY LVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKEKGAVEFDRLSLL PKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKVSAKILLSTY FGSVAEHAALLKSLPVNGLHIDLVRAPEQLDAFADYDKVLSAGVIDGRNIWRANLNKVLE TVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKLKANKPDLYSWLAFTLQKTQELRVLKA ALNEGRDSVAEELAASQAAADSRANSSEIHRADVAKRLANLPANADQRKSPFADRIKAQQ AWLNLPLLPTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIALVVEEQEKLDLD VLVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWST YAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQI DEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMD ADVITIETSRSDMELLTAFGEFKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVE RLWVNPDCGLKTRGWKETLEQLQVMMNVTHKLRAELAK >gi|241321274|gb|ACQV01000006.1| GENE 5 4868 - 5012 221 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760517|ref|ZP_04758610.1| ## NR: gi|241760517|ref|ZP_04758610.1| integrase, catalytic domain [Neisseria flavescens SK114] # 1 48 1 48 268 92 100.0 6e-18 MNMHKNTRLTPHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKA Prediction of potential genes in microbial genomes Time: Thu May 26 11:19:35 2011 Seq name: gi|241321219|gb|ACQV01000007.1| Neisseria flavescens SK114 ctg1118407793868, whole genome shotgun sequence Length of sequence - 46127 bp Number of predicted genes - 42, with homology - 41 Number of transcription units - 20, operones - 12 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 560 572 ## COG0796 Glutamate racemase + Term 577 - 622 9.1 + Prom 614 - 673 6.4 2 2 Op 1 . + CDS 697 - 2475 1832 ## NMC1691 transferrin-binding protein B 3 2 Op 2 . + CDS 2562 - 5291 2360 ## PROTEIN SUPPORTED gi|145628064|ref|ZP_01783865.1| 50S ribosomal protein L34 + Term 5345 - 5388 5.2 + Prom 5303 - 5362 3.1 4 3 Op 1 5/0.000 + CDS 5416 - 5913 560 ## COG3039 Transposase and inactivated derivatives, IS5 family 5 3 Op 2 . + CDS 5844 - 6002 56 ## COG3039 Transposase and inactivated derivatives, IS5 family - Term 6077 - 6119 -0.7 6 4 Tu 1 . - CDS 6336 - 6827 568 ## COG1495 Disulfide bond formation protein DsbB - Term 6976 - 7013 9.1 7 5 Op 1 . - CDS 7031 - 7276 384 ## COG2010 Cytochrome c, mono- and diheme variants 8 5 Op 2 . - CDS 7210 - 7428 231 ## gi|261379887|ref|ZP_05984460.1| cytochrome c family protein - Prom 7487 - 7546 3.6 - Term 7489 - 7542 12.1 9 6 Op 1 2/0.143 - CDS 7549 - 8559 1511 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 8580 - 8639 1.9 10 6 Op 2 . - CDS 8645 - 9760 1536 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + TRNA 9999 - 10075 92.4 # Val GAC 0 0 + Prom 10001 - 10060 80.2 11 7 Op 1 16/0.000 + CDS 10128 - 12041 2371 ## COG0441 Threonyl-tRNA synthetase 12 7 Op 2 36/0.000 + CDS 12107 - 12580 563 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 12596 - 12634 3.1 + Prom 12643 - 12702 3.4 13 7 Op 3 46/0.000 + CDS 12723 - 12920 326 ## PROTEIN SUPPORTED gi|225076638|ref|ZP_03719837.1| hypothetical protein NEIFLAOT_01688 14 7 Op 4 13/0.000 + CDS 12933 - 13292 590 ## PROTEIN SUPPORTED gi|225076637|ref|ZP_03719836.1| hypothetical protein NEIFLAOT_01687 + Term 13314 - 13341 0.1 + Prom 13344 - 13403 8.7 15 7 Op 5 . + CDS 13540 - 14529 1341 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 16 7 Op 6 6/0.000 + CDS 14549 - 14998 286 ## COG3727 DNA G:T-mismatch repair endonuclease + Term 15049 - 15108 2.0 + Prom 15056 - 15115 4.5 17 7 Op 7 . + CDS 15258 - 16163 99 ## COG0270 Site-specific DNA methylase 18 7 Op 8 . + CDS 16135 - 17190 313 ## NMC0680 putative type II restriction enzyme NmeDIP 19 7 Op 9 13/0.000 + CDS 17245 - 19608 2362 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Prom 19643 - 19702 4.3 20 7 Op 10 . + CDS 19723 - 20025 269 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 21 7 Op 11 . + CDS 20009 - 20356 403 ## NGK_0455 hypothetical protein + Term 20416 - 20468 13.5 + Prom 20476 - 20535 6.0 22 8 Op 1 7/0.000 + CDS 20683 - 21468 504 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 21487 - 21532 6.4 23 8 Op 2 . + CDS 21544 - 22410 919 ## COG0777 Acetyl-CoA carboxylase beta subunit + Term 22420 - 22474 13.2 - Term 22414 - 22456 10.2 24 9 Op 1 9/0.000 - CDS 22474 - 22920 282 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 - Prom 22950 - 23009 2.3 - Term 22952 - 22991 9.1 25 9 Op 2 2/0.143 - CDS 23018 - 23230 348 ## PROTEIN SUPPORTED gi|225076627|ref|ZP_03719826.1| hypothetical protein NEIFLAOT_01677 - Prom 23416 - 23475 4.5 - Term 23401 - 23437 -1.0 26 10 Tu 1 . - CDS 23507 - 25354 2975 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 25386 - 25445 6.5 27 11 Tu 1 . - CDS 25533 - 26000 620 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 26087 - 26146 3.1 28 12 Tu 1 . - CDS 26168 - 27682 1860 ## COG4262 Predicted spermidine synthase with an N-terminal membrane domain - Prom 27705 - 27764 3.7 - Term 27750 - 27793 11.1 29 13 Tu 1 . - CDS 27810 - 28880 1510 ## COG3203 Outer membrane protein (porin) - Prom 28939 - 28998 7.8 + Prom 28964 - 29023 7.1 30 14 Op 1 . + CDS 29208 - 30827 1963 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 31 14 Op 2 . + CDS 30903 - 32699 2796 ## COG0006 Xaa-Pro aminopeptidase + Prom 32722 - 32781 3.2 32 15 Op 1 49/0.000 + CDS 32933 - 33853 1263 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 33 15 Op 2 4/0.000 + CDS 33926 - 34834 1215 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 34 15 Op 3 . + CDS 34859 - 36463 796 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - TRNA 36593 - 36683 69.6 # Ser TGA 0 0 - Term 36523 - 36556 2.4 35 16 Tu 1 . - CDS 36763 - 37542 1307 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 37570 - 37629 4.0 + Prom 37614 - 37673 5.2 36 17 Op 1 2/0.143 + CDS 37713 - 38102 667 ## COG0251 Putative translation initiation inhibitor, yjgF family 37 17 Op 2 . + CDS 38173 - 39003 1021 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 39015 - 39063 13.4 - Term 39004 - 39050 11.7 38 18 Op 1 . - CDS 39058 - 40491 1548 ## COG0277 FAD/FMN-containing dehydrogenases 39 18 Op 2 . - CDS 40527 - 40793 666 ## - Prom 40958 - 41017 4.8 + Prom 41214 - 41273 5.8 40 19 Tu 1 . + CDS 41308 - 41790 802 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 + Term 41808 - 41869 24.0 + Prom 41915 - 41974 2.7 41 20 Op 1 5/0.000 + CDS 42008 - 44086 2314 ## COG1640 4-alpha-glucanotransferase 42 20 Op 2 . + CDS 44210 - 46127 2642 ## COG0296 1,4-alpha-glucan branching enzyme Predicted protein(s) >gi|241321219|gb|ACQV01000007.1| GENE 1 3 - 560 572 185 aa, chain + ## HITS:1 COG:NMA2026 KEGG:ns NR:ns ## COG: NMA2026 COG0796 # Protein_GI_number: 15794906 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Neisseria meningitidis Z2491 # 22 185 102 270 270 229 70.0 3e-60 PKKNLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDARWTKKNGLY KLGYKQHTRTDAEGWLGHEVTRLTVCEYLKPLFADGIDTLVLGCTHFPLLKPLIGREAGN VALVDSAITMAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRIIGERFLGRTMEQIE MVSLG >gi|241321219|gb|ACQV01000007.1| GENE 2 697 - 2475 1832 592 aa, chain + ## HITS:1 COG:no KEGG:NMC1691 NR:ns ## KEGG: NMC1691 # Name: tbpB # Def: transferrin-binding protein B # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 592 1 599 599 656 61.0 0 MKNSLIAQAAGILPVLLLSACAGGGSFDLDSVETKQHNPQSEAPKYQDEQTEKPAKPDEA QAAENDRPAYGFAAKIPRRNIHFNVKQGHQPLSDADWVKLAAGEPDKFPQKDDIFAMDKG TLNESITTGDGKSRVEGYTKFKYVRSGYIYRNGANKIDPKNNIALFGPDGYLFYKGSNPS QALPMGKAIYKGTWDYVTDAKEKQKFPQLGSPPAGDRYGALSAEEADVLRNESEAPKGQT DFGLTSEFEVDFAAKTMTGALYRNNRITHNETENKTKQIKRYDIQANLHGNRFKGKALAA DKDTGNGHPFVSDSDSLEGGFYGPQGDELGGKFLANDKKVLAVFSAKQKDDAEKPLAETF MDAYRIGADFVKKQIDSFSNVAKLLIDGVELALVPSEGTQTAFQHVFEKNGVKVSACCSN LDYLHFGVLEHGDSHDMFLQGSRTPVSDMPVTAGEAVYRGTWSGTIVNGTSWSAEPSNKE GGNRAEFKVNFAEKTLNGMLTAKDRIAPVFTITATIQGNGFSGVAKTGENGFALDPKNTI DPKRTNIRADVSGGFYGKTAIEMGGSFSGNTLEGESGKAAVVFGTKRQQLVR >gi|241321219|gb|ACQV01000007.1| GENE 3 2562 - 5291 2360 909 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628064|ref|ZP_01783865.1| 50S ribosomal protein L34 [Haemophilus influenzae 22.1-21] # 1 909 1 913 913 913 50 0.0 MKQQHLFRLNILCLSLMTALPAYADVLPSGQVWEKQLDTVQVNAKKQKTRRDNEVTGLGK LVKSSETLSKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIRGMDKNRVSLTVDGVSQIQ SYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSSEYGNGALAGSVAFQTKTAAD IIGEGKQWGIQSKTAYSGKDHALTQSLALAGRSGGAEALLIYTKRRGQEIHAHKDAGKGV QSFNRLIPVEDTHPYANFIVEEECSNGYAACKDNAKKDALAKDERKTVSTQDYTGPSRFL ADPLEYGSQSWLFRPGWHLDNRHYVGAILERTQQTFDTRDMTVPAYFTEADLNESVRRNG TPSGFGKYSGNNKAERLFVQGEGGTLQGIGYGTGVFYDERHTKNRYGFEYVYHNADKDTW VDYARLSYDRQSIDLDNRLQQTHCSHDGSDKNCRPDGNKPYSFYKSDRMIYEESRNLFQA VFKKAFDTAKIRHNLSINLGYDRFKSQLSHSDYYLQNAVQAYGSKTPEGEQSPNGSQGKP YWVSIGKTTVNTSPICRFGNNTYTDCTPRNIGGNGYYAAVQDNVRLGRWADVGAGIRYDY RSTHSEDKSVSTGTHRNLSWNAGVVLKPFTWMDLTYRASTGFRLPSFAEMYGWRAGESLK TLDLKPEKSFNREAGIVFKGDFGNLEVSYFNNAYRDLIAFGYETRTQNGQTSASGDPGYR NAQNARIAGINILGKIDWHGVWGRLPDGLYSTLAYNRIKVKDADIRADRTFVTSYLFDAV QPSRYVLGLGYDHPDGIWGINTMFTYSKAKSVDELLGSQALLNGNANAKKAASRRTRPWH VTDVSGYYNIKKHLTLRAGVYNLFNYRYTTWESVRQTAEGAVNRHNNVGRYNRYAAPGRN YTLTLEMKF >gi|241321219|gb|ACQV01000007.1| GENE 4 5416 - 5913 560 165 aa, chain + ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 120 12 131 335 245 97.0 2e-65 MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTHYLRDHRGRPAYPLLSMFKAVLLGQWHS LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSELLELINRQLTEK LTANIRCRKRKPNATDICRRPVMWSNKASVRYTVNSAMRGQPTLS >gi|241321219|gb|ACQV01000007.1| GENE 5 5844 - 6002 56 52 aa, chain + ## HITS:1 COG:NMA0458 KEGG:ns NR:ns ## COG: NMA0458 COG3039 # Protein_GI_number: 15793461 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 52 319 370 370 96 94.0 1e-20 MVEQSFGTLHRKFRYARAAYFELSKVSAQSHLKAMCLNLLKAANRLSAPVAA >gi|241321219|gb|ACQV01000007.1| GENE 6 6336 - 6827 568 163 aa, chain - ## HITS:1 COG:NMA1903 KEGG:ns NR:ns ## COG: NMA1903 COG1495 # Protein_GI_number: 15794788 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Neisseria meningitidis Z2491 # 3 161 41 199 199 185 62.0 3e-47 MNFFRKTVLFLVVLSIFAACGSFISQYVLGMNPCVLCILQRLCVLAVGLLAIVTAFSSQS SKFARSLSALLIAAPAVYGAGVAAYQIWLQSLPPGTAPSCGAPWTFRLRDWPLFDWFEPI VRGFGNCAEPDYLFGVALPVWSILYFGFVVLLLLWAWLKTRKI >gi|241321219|gb|ACQV01000007.1| GENE 7 7031 - 7276 384 81 aa, chain - ## HITS:1 COG:NMB0717 KEGG:ns NR:ns ## COG: NMB0717 COG2010 # Protein_GI_number: 15676615 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 1 81 57 137 138 124 76.0 5e-29 MFPPLFQSDYINKKPQALLQSMTKGINGPIKVNGKSYNGFMPATAINDADVAAVATYIMN AFNNGGGTITEADVKKSHGKK >gi|241321219|gb|ACQV01000007.1| GENE 8 7210 - 7428 231 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261379887|ref|ZP_05984460.1| ## NR: gi|261379887|ref|ZP_05984460.1| cytochrome c family protein [Neisseria subflava NJ9703] # 1 68 1 66 132 69 71.0 7e-11 MTALRPILLLLTALSIPTAFAADAALMNKGQKIYETNCAACHGKKAKAGVPCSRLYSSPT ISIKNRKPCCKA >gi|241321219|gb|ACQV01000007.1| GENE 9 7549 - 8559 1511 336 aa, chain - ## HITS:1 COG:NMA0927 KEGG:ns NR:ns ## COG: NMA0927 COG0276 # Protein_GI_number: 15793886 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Neisseria meningitidis Z2491 # 1 335 1 335 336 546 77.0 1e-155 MSRFHTEPPLAYTAQNRTAVLLLNLGTPDAPTAAAVKPYLKEFLSDQRVVELPKLLWQPI LRGLVLTFRPKKSAHAYEKIWFKEGSPLEVYTHRQAEALAKHLPDVIVRHAMTYGNPSVA DVLAELKAQGVGKLLVIPLYPQYAGSSTGAALDKVFQELLLQRNQMSVRTVSRYYDDAAY IQAMKQHIEAYWAQNGRSEKLMLSFHGIPQKHHDDGDPYPDECHHTAKLLAQALGLSEQE YIVSFQSQFGKSQWIKPSTQALFDQLPKQGTTKLDVFCPGFLADCLETMEEIAIMGREQF HAAGGKEYRYIPCLNDSADWIVALAQLSRANLQGWI >gi|241321219|gb|ACQV01000007.1| GENE 10 8645 - 9760 1536 371 aa, chain - ## HITS:1 COG:NMA0928 KEGG:ns NR:ns ## COG: NMA0928 COG0343 # Protein_GI_number: 15793887 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 765 95.0 0 MLKFTLHKKDGHARRGTLELNHGKIETPVFMPVGTYGSVKAMNPQNLHDIKAQIILGNTY HLWLRPGLEVIEQFGGLHEFIGWNKPILTDSGGFQVFSLSDMRKLTEEGCTFQSPINGDK LFLSPEVSMKIQTVLNSDIVMQLDECTPGEATHSQAQKSLQMSLRWAERSKKAFEDLKNP NALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSVGEPKPEMYRMLRAVGPILPEHK PHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNGWLFTRFGDLKIKNAKHKLDKRPID ESCTCYACQNFSRSYLHHLHRVGEILGAQLNTIHNLHFYQVIMAEMREAIEQGKFTDWQA QFHENRARGVD >gi|241321219|gb|ACQV01000007.1| GENE 11 10128 - 12041 2371 637 aa, chain + ## HITS:1 COG:NMB0720 KEGG:ns NR:ns ## COG: NMB0720 COG0441 # Protein_GI_number: 15676618 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 637 1 637 637 1286 95.0 0 MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKATVAGKVNGKLVDACDPITEDAHVQII TPKDKEGVEIIRHSCAHLVGHAVKQLYPDAKMVIGPVIEDGFYYDIATEKPFTPDDVAAI EARMKELIAQDYDVIKVMTPRAETVKIFQDRGEEYKLRLIEDMPEVEAMGMYHHQEYVDM CRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRVYGTAWASKDELKAYIQRIEEAEK RDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVIEQHMRKELNVAGYKEVKTPQIMDK TFWEKSGHWENYKDNMFVTSSEKREYAVKPMNCPGHVQIFNNGLRSYRDLPMRLAEFGSC HRNEPSGALHGLMRVRGFVQDDAHIFCTEDQIVDEARAFNELLVRIYKQFGFHDVAVKLS LRPEQRAGSDEVWDKAEQGLRDALTACGVEWEELPGEGAFYGPKIEYHVKDALGRSWQCG TLQLDFVLPERLNAEYVTENNDRARPVMLHRAILGSLERFIGILIENHAGSFPLWLAPVQ MVIMNITENQADYCREVAVKLQAAGFRVELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEK QENKVAVRRKAEDLGSLDVDDFIAQLQQEITDALVNH >gi|241321219|gb|ACQV01000007.1| GENE 12 12107 - 12580 563 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 157 2 159 159 221 65 6e-57 KEVRLISESGDQLGVVSVREALAMAEEQDVDLVEISPTAKPPVCKLMDYGKYKYQQAKKR DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTLRFRGREMAHQQLG AQLLERVKEELAEVAQIESFPKMEGRQMVMMIAPKKK >gi|241321219|gb|ACQV01000007.1| GENE 13 12723 - 12920 326 65 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076638|ref|ZP_03719837.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens NRL30031/H210] # 1 65 1 65 65 130 100 2e-29 MPKMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMVDSRDLASVAK MLPYA >gi|241321219|gb|ACQV01000007.1| GENE 14 12933 - 13292 590 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076637|ref|ZP_03719836.1| hypothetical protein NEIFLAOT_01687 [Neisseria flavescens NRL30031/H210] # 1 119 1 119 119 231 100 4e-60 MPRVKRGVTARARHQKVFALAKGYRGRRKNVYRVAKQAVMKAGQYAYRDRRQRKRQFRQL WIVRINAGARENGLSYSKFMNGLKRAAIEIDRKVLADLAVFDKAAFAQLVEKAKAALAA >gi|241321219|gb|ACQV01000007.1| GENE 15 13540 - 14529 1341 329 aa, chain + ## HITS:1 COG:NMA0933 KEGG:ns NR:ns ## COG: NMA0933 COG0016 # Protein_GI_number: 15793892 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 328 1 328 330 662 98.0 0 MENVNRIVAEGIAAIEAAQDFNALEQIKARYLGKTGELTGLLKTLGQMSPEERKTIGAHI NECKNQFQTAFNAKRDALNEAKLQAQLAAEALDITLPGRAQEHGGLHPVTLTLQRVVELF HGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYVENGDVLRTHTSPIQIRYMLD KKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEGVTFADLKAVFTDFIRRFFERDD LQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGMVHPNVLKNVNIDPEKYTGFAFGIG LDRFAMLRYNVNDLRLFFDNDLNFLKQFK >gi|241321219|gb|ACQV01000007.1| GENE 16 14549 - 14998 286 149 aa, chain + ## HITS:1 COG:SMc03764 KEGG:ns NR:ns ## COG: SMc03764 COG3727 # Protein_GI_number: 15966902 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Sinorhizobium meliloti # 1 134 2 137 145 95 38.0 3e-20 MDKLTPEQRKKCMRANKSKGTKPELALAKAMWALGLRYRKNSGSIFGKPDFSFKKYKVAV FVDGEFWHGKDWEQKKAEIKGNREFWIAKIERNIKRDIEVTGRLKAEGWTVLRFWSNDVV KDTTSCAEAVRQVIYEKQGLSKSQQAGKK >gi|241321219|gb|ACQV01000007.1| GENE 17 15258 - 16163 99 301 aa, chain + ## HITS:1 COG:alr4173 KEGG:ns NR:ns ## COG: alr4173 COG0270 # Protein_GI_number: 17231665 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Nostoc sp. PCC 7120 # 7 289 78 376 385 364 58.0 1e-100 MEKARDLSSWVKKEKQDGVIVGFIGGPPCPDFSVAGKNKGRDGENGKLSQSYVDLICKNQ PDFFVFENVKGLYRTAKHREFFNALKRQLSDFGYVCTEKLINAIEYGVPQDRERIILVGF LNQHVDTLQKFDWDAHILFPDALGKNWPTTEDVGSAVSQPENIYPELTVQYWFDRNGVDT HPNAGKHFQPRAGLKKFQTISEGDDKKKSYKRLHRWRYSPTAAYGNNEVHIHPYLPRRIS AAEALAIQSLPKEFELPDNMTLSNMFKTIGNGVPFLAAKGIAMTLKSYLENHYERTKTDG C >gi|241321219|gb|ACQV01000007.1| GENE 18 16135 - 17190 313 351 aa, chain + ## HITS:1 COG:no KEGG:NMC0680 NR:ns ## KEGG: NMC0680 # Name: not_defined # Def: putative type II restriction enzyme NmeDIP # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 351 1 351 351 719 98.0 0 MSGQKLTAANLVSAIDSLKKNVNYNYVNSSNTHTIQIVHVEKPEGPIKIKRGNTETSISK QAIWRLADALSTGEPVNVDRVFGASYNFRSALEALLAHTPEIYWCKLQRIQPGLNKSEVV EGHKHIIWLPDRPHEKGVMKEYETDVVISEIPSNNVVYDALSLPSTHSEIDIDVKRRHVQ IQIALSAIGFQLGFRTWIARNDQGISYGDKKIADLDGIVQKIECEKLISSFDGAVQAAMH IDCIWFRNGKLMPAVMEVEHSTGVRSGLARMKQLKDLLPPYANTRWVIVAPDEDRDKVFK EANVPMFQNLDTQYFPYSAVEELYSLCIRRKLTNKAVNEEFLDCFMEKCVM >gi|241321219|gb|ACQV01000007.1| GENE 19 17245 - 19608 2362 787 aa, chain + ## HITS:1 COG:NMB0728_2 KEGG:ns NR:ns ## COG: NMB0728_2 COG0072 # Protein_GI_number: 15676626 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Neisseria meningitidis MC58 # 146 787 1 642 642 1125 87.0 0 MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLPGNFKIKPTKMRGVPSNGMLC STNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIAREV SALTQCAFTPVEIQTASIGSEKKQAVRIDAPADCGRFISRVIENVNAEAATPDWMKQRLE RSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKTVTLAD NTLVVADEKGVLSLAGLMGGEASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGSDSSFR FERGVDYRLQADAIERATELVVQICGGAAGEMVEAQGKLPEAKQVELRLGRLKTVLGVEI PAKQVEIILQHLGLQPEKTAEGFRVISPSFRFDIEIEADLIEEIGRVYGYENIPDDYTSG RLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTYPIRLQNPLAAQY AVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFSKDSADQFVQNERIGGLWYGSVLPE QWGEKTRNVDFYDIKGDVESLLKNKEVTFVKTEHPALHPGRAANIVSDGRIVGFVGELHP KWLQKYDLPQAPLVFEIDMDAVLGREKTRYQSVSKFQAARRDLAFVMPEAVTHDDLLNAL KAAANKLVQEISVFDVYRGTGVPEGMKSVAVKIILQDMENTLTDEVIEPLVAKMIKAAAE KDAQLRA >gi|241321219|gb|ACQV01000007.1| GENE 20 19723 - 20025 269 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 2 93 3 93 96 108 56 7e-23 MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLARGEEIKISGFGNFQLRDKPQ RPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQQ >gi|241321219|gb|ACQV01000007.1| GENE 21 20009 - 20356 403 115 aa, chain + ## HITS:1 COG:no KEGG:NGK_0455 NR:ns ## KEGG: NGK_0455 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 104 1 101 102 124 56.0 1e-27 MTSNNNPVIPAKRYFTLDEMCQLVQISPAQFAQWQHENNVVIGYGGDRYTRSDVVKLLKL KDTFEPYIDTFSRGALDANGNPAANAEEVRHGLMQVLSDLERHLGSEQQNHHVEL >gi|241321219|gb|ACQV01000007.1| GENE 22 20683 - 21468 504 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 258 1 258 263 198 40 4e-50 MSRIQQTFSALNGAKALIPYIMVGDPSLETTLALMHSLVANGADILELGVPFSDPMADGP TIQRAAERALANHVSLHDVLETVRLFRQTNDKTPVVLMGYLNPVHKMGYQAFAQAAAKAG VDGVLTVDSPVETIAPLHELLKAQGIDCIFLIAPTTTEERIQTIAKVAGGFVYYVSLKGV TGAASLDTEEVSRKIELLRKYIDIPIGVGFGINNAESARKIGAIADAVIVGSRIVKEIES HAGSEAEAVGALVKELKDAIR >gi|241321219|gb|ACQV01000007.1| GENE 23 21544 - 22410 919 288 aa, chain + ## HITS:1 COG:NMA0880 KEGG:ns NR:ns ## COG: NMA0880 COG0777 # Protein_GI_number: 15793849 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Neisseria meningitidis Z2491 # 1 288 1 290 290 533 90.0 1e-151 MSWLDKILPPKIKNRSSSSSVPEGLWHKCPSCSATVYSTELKQNSEVCPKCNHHNPLSAR ERLDLLLDEEGREEIAVNIKPTDPLKFKDSKKYTDRLTAARKATGEDDALVVMKGTMNGL PVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCSFICVAASGGARMQEGLNSLMQMT KTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQTVR ETLPEGFQRAEFLLEKGAIDQIVDRRSMKKRISDLITLLRHEGKVTAA >gi|241321219|gb|ACQV01000007.1| GENE 24 22474 - 22920 282 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 134 1 134 147 113 41 2e-24 MSLKTQLTEDMKTAMRAKDQVSLSTIRLINAAIKQFEVDERTEADDAKVISILTKMVKQR KDSAKIYTEAGRQDLADKENAEIEIINRYLPQMMSAEEIKTVVEAVITETGASGMADMGK VMGVLKTRLAGKADMGEVNKVLKAALTA >gi|241321219|gb|ACQV01000007.1| GENE 25 23018 - 23230 348 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225076627|ref|ZP_03719826.1| hypothetical protein NEIFLAOT_01677 [Neisseria flavescens NRL30031/H210] # 1 70 1 70 70 138 100 5e-32 MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAAKRLQKRL RSQQLPPKMY >gi|241321219|gb|ACQV01000007.1| GENE 26 23507 - 25354 2975 615 aa, chain - ## HITS:1 COG:NMA0503 KEGG:ns NR:ns ## COG: NMA0503 COG0741 # Protein_GI_number: 15793502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 22 614 21 616 616 798 71.0 0 MNVQRLFPLSLSLITAAVLSACATQNTQTASNTETVVQPKSTSIPSRRADSESKILSDYS QYQSAIDAAKRGDDAWVQQFLSQASDSAMAENVRNEWLKTLGARGQWDLFRQEFSKLNAA GVAQEVQCYADLSSSNYSKAAELVRMTSKLPAGCTRLVESAAASGHLNTNDAWRRVRGLL SNSQTTDARNLAAALGSPFEGGTQGATEYSLLSVIGKDARKSASAATTLSDMESGLSREQ RSFAWGVLGHYHAQSQNMPTALSYYGRVSDRKQLTDEQLEWYARAALRLQRWDELASVIQ YMPEKLQKDPTWQYWLGRSFAAQGKSSQAKEMYEKAAASGRNFYAVMAGEELGRRINTRN NVSDADAKDVRRMSEDGAIKRALVLFKNSQSNGDSKMRRQAQAEWRFATRDFNEDNLLTA AQVAFDNQFYDMAINSADRTDHKLNYKLRYLSPFKDITVRYAAQAGVDPAWVYGLIRQES RFVMSAQSSVGAQGLMQVMPATAREIAGKIGMSSSELYTMDGNIRMGTWYMADAKRRLQN NEVMATAGYNAGPGRARNWQASSPLEGAIYAETIPFTETRDYVKKVMTNATYYASLFNEP QTSLKQRMGTVPGRY >gi|241321219|gb|ACQV01000007.1| GENE 27 25533 - 26000 620 155 aa, chain - ## HITS:1 COG:NMB0730 KEGG:ns NR:ns ## COG: NMB0730 COG3030 # Protein_GI_number: 15676628 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Neisseria meningitidis MC58 # 1 155 1 160 161 180 62.0 8e-46 MQYFGIGFLVLIFLEIMSIVWVADWLGGGWTLFLMALSFISGIFMLRHTGISGLLLAGAA VRSGQNISLYQMLWPIRYTAAAVFLLSPGFISTAVALLLLIPFKGNAAVSSTQSFQSRQT YSSAKDNEDIIEGEYTVTRTSKADKPQDYIEHKPD >gi|241321219|gb|ACQV01000007.1| GENE 28 26168 - 27682 1860 504 aa, chain - ## HITS:1 COG:RSp1337 KEGG:ns NR:ns ## COG: RSp1337 COG4262 # Protein_GI_number: 17549556 # Func_class: R General function prediction only # Function: Predicted spermidine synthase with an N-terminal membrane domain # Organism: Ralstonia solanacearum # 7 504 8 510 510 591 60.0 1e-169 MNAHRTLIISVFIVASCGLAYELIIAALASYLLGDSILQFSSVIGLYLFSMGIGAHLTRY IKDEDVLHRFIEIELLVGIIGGISALALFVAFGLSAAPFRTLLYAFVLIVGMVVGMEIPL VMRVLNQKGAEFKELVSKVLTFDYLGALAVSLLFPLLLAPKLGMARSALLFGIFNAAVAY LTARVFKSELPRYHAIRTRAFIVLTALITLFAYADRISFKAEQSYFGDPVVYQSHSPYQR LVVTRWKDDTRLYINGNLQFSSRDEARYHEALVLPAMQMVPNAERVLILGGGDGLAAREV LKYPQVKNVTLVDLDPDMTATFKTSATLSALNQGSLSHPKMHVVNDDAAKWLEGSSEKFD VIIIDLPDPSNFSLGKLYSVPMYRLVARHLQPQGKIVVQSTSPYFAPNAYWSVVATLEAA GLSTAPYHVYVPSFGEWGFVLAGFDKQFPVPQKFDVPTRYLNAQTAAEMFRFPPDMARRK VEANYLNNQILVSYFESDWNNVMR >gi|241321219|gb|ACQV01000007.1| GENE 29 27810 - 28880 1510 356 aa, chain - ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 7 330 5 311 331 92 27.0 1e-18 MNKLSCFVAITLIGSSMSIAHAEPKMSGTIYIMTEVEHNNKTGVTNTTISDKSSSLYLSD EVRLNNDLWLKWQLGSFIYFDSDRWGGWGTADSYVALNSYKNLGTVKMGYISTPMNSIYL NPFDTNSSILEFGKISRFGQRRVSMAYESPWKNGFQFKFNVSPGSNAARNNNDWNPDKKR DGDWVFGWGVDYNHPNNGFNAHYAAEYAPNDSPTETKDFQAHAFMAGYSKDKISVDAAFQ YAKNTCDGFSCWGVWKDAAGNVAGSYDKEINNTKEFMVSGSYKVGNFKPQIGFAYGKSSI GEDYKHVAVSTDYSFSKRTTATLGAGWLKENVNPKYDKDLPKKSSYAVGMVFKHRY >gi|241321219|gb|ACQV01000007.1| GENE 30 29208 - 30827 1963 539 aa, chain + ## HITS:1 COG:YPO2182 KEGG:ns NR:ns ## COG: YPO2182 COG4166 # Protein_GI_number: 16122412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 40 531 43 538 545 452 47.0 1e-127 MAGKTYPLLVASLAAVFALSACSRDVKPAPEFKRTDYERVVVSNGVEPGTLDPQMSGDMA AGAIIRQLMDGLVGTDAEGKTIPALAEKWESEGERVWTFHLRDAKWSNGDPITAEDFVYS FRRLADPATGAPFGSYLVDAQVENAEDILNGKAKPETLGVKALDAKTLQFTLIAPVPYFP DMLIQQFTFPVHRATVEKYGNKWTQPGHYVSSGAYLLTDWKVNSHINMERNPNYYDKDKV AIPKAVFLSGSGEYNRYRANEIDVTYGIPSDQVKVADIEFPGQVKRTTSLCSWYLEPNHE AAPFNDPRVRKALNMLTRRDIVVKVGGRGDTPAFQLTPPQMQGVIPVYPEWKEWTPEKRI ETARKLLNEAGYNDDHPLEFDILYSTSEASKKQITAVQSVWKAAIPFIRPTLSNEEWKTY LDTRAQGNFKVSFSGWCSDFNDPAGMLNILKSNNSNNAFRYKSAAFDTFMNNTLKDGVSK EARSKLYADAEKQLQEDAALIPLYHQVEVRMVKPDIIGYSDKDPLRNYTVKSWSFAPKK >gi|241321219|gb|ACQV01000007.1| GENE 31 30903 - 32699 2796 598 aa, chain + ## HITS:1 COG:NMA1640 KEGG:ns NR:ns ## COG: NMA1640 COG0006 # Protein_GI_number: 15794534 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 598 62 659 659 904 73.0 0 MKSVQQRLSALREAMKKHGVDAFVIPSADPHLSEYLPEHWQARRDFSGFTGSAGTLVVTA DKAGVWTDSRYWEQAGQQLAPSGIELQKMGVDAPYTEWLAQNLPEGAVVGAPADMFALSG ERGLKQALAAKNIRLEYPETLLDEVWDDRPALPTPEIYVHHPDYVSETAAEKLARIRAAM KEQGADAHLVSSLDDIAWITNLRGDDVPFNPVFLSHLFISQDKAVLFTDAGRLKAESAEA LKAAGFEVLPYAQAADYLAGVKGALLIDPNKTAVGTLRRLPEDVRLIEAIHPSTFFKSVK SDADIAHIRNTMAEDGAALCGFFAEFEQILVDGGELSELDIDGMLYKHRSQRPGFISPSF DTIAGYNANAALPHYSATPENNSKIKGDGMLLIDSGGQYWGGTTDITRVVPVGNPSAAMK RDYTLVLKAHISLAETIFPENIKGPMIDAICRKSLWQAQCDYGHGTGHGVGYFLNVHEGP QSIAVAAVPQPHHAMKSGMLTSNEPGLYRPGKWGIRIESLVINRPVENPEETEFGKFLYF ETVTLCPIDMRLIDTKLMTGSEIEWLNQYHAEVRRRLEPLTEGAAKAWLIERTEPLAR >gi|241321219|gb|ACQV01000007.1| GENE 32 32933 - 33853 1263 306 aa, chain + ## HITS:1 COG:YPO2183 KEGG:ns NR:ns ## COG: YPO2183 COG0601 # Protein_GI_number: 16122413 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Yersinia pestis # 1 306 1 306 306 421 71.0 1e-117 MLKFIIKRICASIPTMLVLITVSFFLMRLAPGSPFTGERNLPPAVMANIEAKYHLNDPMY LQYFHYLKQLAQGDLGPSFKYKDFSVNELLAQSLPVSAELGFYAFLIAAIFGMFIGIIAA LKQNSWLDYSLMSGAMTGIVVPSFVMAPVLVLVFAVRLQWLPAGGWNDGALMNLILPVVT LSIGYVSSIARITRGAMIEVLNSPFIRTARAKGLPMSRIILRHALRPAMLPIVSFLGPAF VGIITGSIVIENVFGIPGVGQLFVNGALNRDYGMILGLTILVGIMTILFNAILDILYAII DPKIRY >gi|241321219|gb|ACQV01000007.1| GENE 33 33926 - 34834 1215 302 aa, chain + ## HITS:1 COG:PM1908 KEGG:ns NR:ns ## COG: PM1908 COG1173 # Protein_GI_number: 15603773 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Pasteurella multocida # 1 302 1 303 303 384 68.0 1e-106 MLFKKKQTQALAEAAEYAQVHGKSLWSDAWRRFKQNKAAVYSIIILLLISIFVIVAPWIV RYTYDFTDWDNMQIPPSFSTHHYLGTDLLGRDLLSRAATGGRISLLVGVAGALVAVVIGT LYGAIAGFIGGKLDSLMMRFLEILNAFPFMFFVILLTTFFGRNLLLIFAAVGLVSWLDVA RIVRGQTLSLKHKEFVEAARVSGVAKRKIVTRHIIPNVLGVVMVYASLLVPGMIMFESFL SFLGLGVQEPMTSWGSMLQEGAISMEAAPWQLLVPSFFLVTTLFCFNFIGDGLRDALDPK DR >gi|241321219|gb|ACQV01000007.1| GENE 34 34859 - 36463 796 534 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 5 530 8 522 563 311 37 6e-84 MTKQLLVVENLDINFELHEKNVHAVRNVSFKVAEGETLALVGESGSGKSVTSMSIMRLLP EKFARYSKDSRITFDGISILDADEKTLRDLRGNRISVIFQEPMTSLNPFMRIGTQLIEAA RVHNKKLGKKEAGQKALALLERVGIKEAERRMKQYPHEFSGGQLQRIMIAMALINEPDLL IADEPTTALDVTIQAEILDLLHDLQQQMGMAIIFITHDLGLAEHYSKTVCVMRNGEIVER GKIKEVFAHPKHEYTAELINAIPKGMKEPEENNAGVLIDADNVNVSFVLKQNFFGKPLKT FDAVKGISLKIKEGETLGVVGESGSGKSTLGKAVMQMLPYTGHISFEGKDLKNYTAEEAR RLKSQRQIVFQDPFGSLSPRLTVGEIIGEGLTVHHPEMTKKERIQRVLEVMKEVSLPLDA LNRYPHEFSGGQRQRIAIARAVILRPKFILLDEPTSALDRSVQSKVVELLRDLQKKYGLT YMFISHDLSVVRAVSDNVIVMKQGEMVEYGSADQIFHHPQNDYTKRLINAAFDL >gi|241321219|gb|ACQV01000007.1| GENE 35 36763 - 37542 1307 259 aa, chain - ## HITS:1 COG:NMB0895 KEGG:ns NR:ns ## COG: NMB0895 COG3022 # Protein_GI_number: 15676791 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 445 86.0 1e-125 MFFVLSPAKNLNEKDPSPVSSFTQPDLLPEAEILMQELRQLAPQQIAELMHVSDKIALLN AERNAVWHTPFTPENAKQAVFMFNGDVYEGIAADTLKPEQIDYLQQHVRLLSGLYGVLRP LDLMQPYRLEMGTAFANSRGKNLYEFWGDKITDLLNQTLKQAGSDVLINLASQEYFKSVN TKKLNARLITPIFKDEKNGKYKIISFYAKRARGLMVRYAAEHGITDPEMLKNFDYEGYSF NEAASNEAEWVFMREEQSK >gi|241321219|gb|ACQV01000007.1| GENE 36 37713 - 38102 667 129 aa, chain + ## HITS:1 COG:NMA0861 KEGG:ns NR:ns ## COG: NMA0861 COG0251 # Protein_GI_number: 15793831 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis Z2491 # 1 129 1 129 129 204 95.0 4e-53 MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVVGDGDFRAEAVQVFKNL QAVAEAAGGSLNDIVKLNAYLTDLANFAVFNEVMAEFIEQPFPARAAVGVASLPKGVQVE AEAVLVLNA >gi|241321219|gb|ACQV01000007.1| GENE 37 38173 - 39003 1021 276 aa, chain + ## HITS:1 COG:NMA0860 KEGG:ns NR:ns ## COG: NMA0860 COG0639 # Protein_GI_number: 15793830 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Neisseria meningitidis Z2491 # 1 276 1 276 276 447 75.0 1e-126 MAHYAIGDIQGCFDELTLLLAKIGFNHGTDTLWLVGDIVNRGPKSLETLKFAKEHDSSVQ MVLGNHDLHLLAVGCGEGTLKRSDTVEPILTHPDSHAMLDWLRHQPLLVRGDRHVMVHAG ILPQWSVDKAESLAREAEDELQGKKYRKFFGKMYGNKPTEWADDLTGYERLRMIINVFTR MRALTYKGELDYEYKSTLKKMPLYLRPWFKAPDRQNLDYITVFGHWSSLGYVNTDQVIAL DTGALWGGELTAVNLDTNEVIQVPSLGGLDWKTALK >gi|241321219|gb|ACQV01000007.1| GENE 38 39058 - 40491 1548 477 aa, chain - ## HITS:1 COG:NMA1724 KEGG:ns NR:ns ## COG: NMA1724 COG0277 # Protein_GI_number: 15794617 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 23 474 4 455 455 705 74.0 0 MYPAFLHSSHSPSRLFCLTAMHLHDRFAEFLSASEIIEATPALLNDQRRRFVSSPDIVLQ PNSIESVQKIMRFCFENRIHVTPQGGNTGLCGATVTTEGVLLNLSKLNRIRDINLADNSM TVEAGVILQNAQKAATEAGRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGSMRDLVLGL EVVLPNGELVSHLQPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFAQPKTKATAWVGL DDIESAVSLLTAVQGYFAERLTSFELISHFALDLSSEFSQLKKPADAEWHILIELADSVP DAGLDEKLAEFLYQSGWENSILAQSEQERSDLWTLRENISASQRKLGTSIKHDIAVPIAQ VATFVRQCAPALEIRFPGIQIVCFGHLGDGSLHYNTFLPNVLSNEAYQYEDAVNTIVYEN ILACHGTIAAEHGVGIIKKHWLPRVRTQAELVLMHAIKNQLDPYGIMNPDKLLPSLD >gi|241321219|gb|ACQV01000007.1| GENE 39 40527 - 40793 666 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSLFAAALLSLALAACGGADKAAETAASAASEAAASATEAAASATEAAASAATEATEA AASATEAAASATEAAASATEAAASEAAK >gi|241321219|gb|ACQV01000007.1| GENE 40 41308 - 41790 802 160 aa, chain + ## HITS:1 COG:NMA1722 KEGG:ns NR:ns ## COG: NMA1722 COG1047 # Protein_GI_number: 15794615 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 160 248 91.0 4e-66 MSIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLVEEALHGKNVGDTVEVA LSPDDAFGEQDPELVRIEDVSVFPVEVEVGMMFEADDPETGDVLIYRVTDVADGKAVVDG NHPLAGMKVLFKATVEGVRDATEEEIAHGHVHGPHGHHHH >gi|241321219|gb|ACQV01000007.1| GENE 41 42008 - 44086 2314 692 aa, chain + ## HITS:1 COG:HI1356 KEGG:ns NR:ns ## COG: HI1356 COG1640 # Protein_GI_number: 16273266 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Haemophilus influenzae # 1 667 6 677 699 475 38.0 1e-133 MSETLEQQAVEAGIDLGYHDINGTYHATKPEVLESIVAVLDKSKADSDGLYLNTMVAHEN GEESLQMPSEFHGAEAVVLIDEADECQSLTLYPGDNDTLWIKLPRLACGYYTLSAETGGK CRLIRLIVAPESVYQPKLLANGGRMNGLTMHLYSLRSERNWGIGDFTDLLNLMKYAAEKK LDFVGINPLHALFTSKPAFASPYSPSSREWLNPIYLDIEKVGAFTYNEQLKNWLAQPKIR QRIAALRVTETVTYTAVWTCKRDALQMAFNAFEQDTCEAAANERAAFEAFVLEKGKALQG FGLFEALDQYYSRSGQVGWQSWPSEFHQPDSKAVEKFARSHEREIRFYMWLQWLCAEQLQ EVNQAAAEYGVKLGIYGDLAVGVARGSVDTWLHRQDYCMDVSVGAPPDPFSPTGQNWDLP PLNPSMLKHTGYEKFAHLLRENMRLYGVLRIDHVMALCRLWWVLNDKTADFGAYVHYDAE VTFAILALESQRNRCVIIGEDLGTVPDQARYLLNRYQVFSYKVMYFSKGWNGFQLPEEYP EQAITVISTHDVAPLAGYWMGKDLDTMFKLGTLPDAAAFQMALDEREHDKADLLDKLKYT GCLGADVQMPAKADETLLAALYKYGALSRSKLYAVQLENLLGVIDNLNVPGVPDGYPNWA QKMPVSLEDFLQHRLMGGQLAIIDEVRMKTNS >gi|241321219|gb|ACQV01000007.1| GENE 42 44210 - 46127 2642 639 aa, chain + ## HITS:1 COG:PM0541 KEGG:ns NR:ns ## COG: PM0541 COG0296 # Protein_GI_number: 15602406 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Pasteurella multocida # 1 632 36 672 730 907 66.0 0 MRVLIPGAVSVDIVNRRSGELIVPSEKIDERGFFVAVLPDDAPDYALSIRYTEDSEPVIE EDPYRFNSELQDMDSWLLAEGKHLRPYETLGAHFAELDGVKGVRFAVWAPNAQRVSVIGE FNNWDGRRHVMRFHRDNGIWDIFIPAVKLNALYKFEIRDANGDVREKADPYAFGVELRPN TASVVRGLPEKVDAPDFRARANAIDAPISIYEVHLGSWKRNPENNFWLTYEQLAKELVAY VKDMGFTHIEFLPVSEYPFDGSWGYQATGLYAPTSRFGSPEELRVLIKAAHDEGISVILD WVVGHFPTDDHGLAKFDGTALYEHADPREGYHQDWNTLIYNFGRNEVKNFLQGNALYWIE RFGFDGIRVDAVASMIYRNYSRKDGEWIPNQYGGHENLEAIAFLRDTNTMLKEEVPAATE IAEESTSFANVIRQEGLNFSFKWNMGWMNDTLRYMMEDPINRKYHHNKMTFGMMYQYSEN FVLPLSHDEVVHGKRSLLGRMPGDCWQQFANLRAYYGFMYGFPGKKLLFMGNEFAQGREW NYNEGLDWFLLEQEGGWHKGVQDFVRELNHVYKDTAPLYQLDQWPEGFEWLVADDGDNSV FVFERRDREGNRVIIISNFTPVVREGYRFGVNSNPFGSN Prediction of potential genes in microbial genomes Time: Thu May 26 11:20:25 2011 Seq name: gi|241321127|gb|ACQV01000008.1| Neisseria flavescens SK114 ctg1118407793873, whole genome shotgun sequence Length of sequence - 72683 bp Number of predicted genes - 63, with homology - 63 Number of transcription units - 41, operones - 16 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 2/0.333 - CDS 26 - 343 581 ## COG4390 Uncharacterized protein conserved in bacteria - Term 373 - 430 11.2 2 2 Tu 1 2/0.333 - CDS 441 - 1067 1057 ## COG0035 Uracil phosphoribosyltransferase - Prom 1093 - 1152 4.8 - Term 1135 - 1175 8.1 3 3 Op 1 . - CDS 1214 - 1525 581 ## COG0278 Glutaredoxin-related protein - Prom 1553 - 1612 1.9 4 3 Op 2 22/0.000 - CDS 1614 - 2864 1179 ## COG0014 Gamma-glutamyl phosphate reductase 5 3 Op 3 . - CDS 2874 - 3677 889 ## COG0263 Glutamate 5-kinase - Prom 3710 - 3769 5.4 - Term 3828 - 3886 18.0 6 4 Tu 1 . - CDS 3943 - 4728 1198 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 4861 - 4920 8.2 + Prom 4702 - 4761 3.5 7 5 Op 1 2/0.333 + CDS 4904 - 5719 1214 ## COG0565 rRNA methylase 8 5 Op 2 . + CDS 5781 - 6629 786 ## COG3782 Uncharacterized protein conserved in bacteria 9 5 Op 3 . + CDS 6664 - 7923 1794 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Term 7926 - 7981 15.1 + Prom 7967 - 8026 5.3 10 6 Op 1 3/0.333 + CDS 8188 - 9456 1865 ## COG1538 Outer membrane protein 11 6 Op 2 13/0.111 + CDS 9500 - 11716 3425 ## COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain + Prom 11723 - 11782 6.2 12 6 Op 3 . + CDS 11804 - 13033 1974 ## COG0845 Membrane-fusion protein + Term 13051 - 13088 8.7 - Term 13030 - 13084 16.1 13 7 Tu 1 . - CDS 13095 - 14183 1295 ## COG0077 Prephenate dehydratase - Prom 14209 - 14268 4.4 + Prom 14174 - 14233 5.4 14 8 Op 1 13/0.111 + CDS 14355 - 14825 549 ## COG0802 Predicted ATPase or kinase 15 8 Op 2 . + CDS 14813 - 16060 1518 ## COG0860 N-acetylmuramoyl-L-alanine amidase + Term 16079 - 16117 10.2 - Term 16067 - 16105 10.2 16 9 Tu 1 . - CDS 16127 - 16729 609 ## Pcryo_0464 hypothetical protein - Prom 16814 - 16873 8.3 + Prom 16845 - 16904 5.0 17 10 Tu 1 . + CDS 16929 - 18269 1902 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Term 18307 - 18346 9.1 + Prom 18415 - 18474 11.4 18 11 Op 1 . + CDS 18524 - 21955 3737 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 22039 - 22084 6.8 19 11 Op 2 . + CDS 22115 - 23122 1175 ## NGK_1375 hypothetical protein + Term 23161 - 23199 7.6 + Prom 23161 - 23220 2.0 20 12 Tu 1 . + CDS 23289 - 24776 1550 ## NGO0555 hypothetical protein + Term 24799 - 24841 3.1 - Term 24844 - 24883 7.1 21 13 Op 1 . - CDS 24904 - 26688 2328 ## COG0058 Glucan phosphorylase 22 13 Op 2 . - CDS 26517 - 27155 683 ## COG0058 Glucan phosphorylase 23 13 Op 3 . - CDS 27098 - 27382 305 ## COG0058 Glucan phosphorylase - Prom 27519 - 27578 4.1 - Term 27656 - 27693 -0.4 24 14 Tu 1 . - CDS 27707 - 29692 2103 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 29722 - 29781 2.9 25 15 Tu 1 . - CDS 29793 - 30389 536 ## COG2801 Transposase and inactivated derivatives 26 16 Tu 1 . - CDS 30593 - 30943 499 ## gi|255067163|ref|ZP_05319018.1| transposase - Prom 31142 - 31201 7.0 + Prom 31144 - 31203 8.6 27 17 Tu 1 . + CDS 31231 - 31977 1052 ## COG3338 Carbonic anhydrase + Term 32005 - 32037 3.0 - Term 31987 - 32029 9.5 28 18 Tu 1 . - CDS 32041 - 33675 2391 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 33696 - 33755 6.1 - Term 33732 - 33781 10.5 29 19 Op 1 2/0.333 - CDS 33800 - 35455 2122 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 35482 - 35541 4.2 30 19 Op 2 2/0.333 - CDS 35550 - 36653 1219 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - Prom 36685 - 36744 3.8 - Term 36712 - 36757 14.4 31 20 Tu 1 . - CDS 36779 - 37258 814 ## COG2847 Uncharacterized protein conserved in bacteria - Prom 37297 - 37356 4.5 - Term 37286 - 37320 -0.5 32 21 Tu 1 2/0.333 - CDS 37390 - 37773 385 ## COG0818 Diacylglycerol kinase - Term 37781 - 37833 9.6 33 22 Op 1 . - CDS 37841 - 38797 313 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme - Prom 38819 - 38878 3.5 - Term 38863 - 38903 8.1 34 22 Op 2 . - CDS 38913 - 40574 2434 ## COG0497 ATPase involved in DNA repair - Prom 40686 - 40745 10.8 - Term 40718 - 40763 2.1 35 23 Op 1 . - CDS 40774 - 41154 418 ## COG1292 Choline-glycine betaine transporter 36 23 Op 2 . - CDS 41214 - 41447 288 ## COG1292 Choline-glycine betaine transporter - Term 41459 - 41510 18.5 37 24 Op 1 . - CDS 41519 - 42127 831 ## COG1386 Predicted transcriptional regulator containing the HTH domain 38 24 Op 2 2/0.333 - CDS 42197 - 42463 349 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Term 42491 - 42561 9.0 39 25 Tu 1 . - CDS 42580 - 42780 349 ## COG2906 Bacterioferritin-associated ferredoxin - Prom 42835 - 42894 7.5 - Term 42968 - 43002 6.0 40 26 Tu 1 2/0.333 - CDS 43008 - 43880 913 ## COG4974 Site-specific recombinase XerD - Term 43890 - 43942 16.1 41 27 Op 1 . - CDS 43963 - 44406 602 ## COG1225 Peroxiredoxin 42 27 Op 2 1/0.333 - CDS 44443 - 45078 621 ## COG1428 Deoxynucleoside kinases - Prom 45103 - 45162 3.6 - Term 45110 - 45147 4.2 43 28 Op 1 2/0.333 - CDS 45176 - 45664 187 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 44 28 Op 2 2/0.333 - CDS 45680 - 46054 504 ## COG3094 Uncharacterized protein conserved in bacteria 45 28 Op 3 2/0.333 - CDS 46110 - 46679 697 ## COG0500 SAM-dependent methyltransferases - Term 46693 - 46730 7.1 46 28 Op 4 1/0.333 - CDS 46758 - 47054 428 ## COG1923 Uncharacterized host factor I protein - Prom 47103 - 47162 4.6 - Term 47306 - 47345 9.1 47 29 Tu 1 3/0.333 - CDS 47353 - 48810 1910 ## COG1160 Predicted GTPases - Prom 48888 - 48947 3.3 - Term 48885 - 48939 0.7 48 30 Op 1 12/0.111 - CDS 48952 - 49581 870 ## COG2976 Uncharacterized protein conserved in bacteria 49 30 Op 2 . - CDS 49582 - 50877 1460 ## COG0124 Histidyl-tRNA synthetase - Prom 50907 - 50966 6.8 - Term 50944 - 51001 6.1 50 31 Op 1 . - CDS 51014 - 52111 404 ## Suden_0538 hypothetical protein 51 31 Op 2 . - CDS 52129 - 54207 2549 ## COG0286 Type I restriction-modification system methyltransferase subunit + Prom 54297 - 54356 4.6 52 32 Tu 1 . + CDS 54550 - 55473 871 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 55495 - 55532 7.1 - Term 55478 - 55525 10.5 53 33 Tu 1 . - CDS 55542 - 56585 1570 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 56730 - 56789 7.5 + Prom 56807 - 56866 5.5 54 34 Tu 1 . + CDS 56927 - 58408 2320 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 58443 - 58489 13.3 - Term 58429 - 58477 12.1 55 35 Op 1 . - CDS 58504 - 59439 1597 ## PROTEIN SUPPORTED gi|241758620|ref|ZP_04756734.1| 50S ribosomal protein L27 56 35 Op 2 . - CDS 59458 - 61158 2251 ## COG0608 Single-stranded DNA-specific exonuclease - Prom 61198 - 61257 5.7 57 36 Tu 1 . - CDS 61262 - 61795 785 ## COG3028 Uncharacterized protein conserved in bacteria - Prom 61879 - 61938 2.9 58 37 Op 1 . + CDS 61920 - 63251 1931 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Term 63271 - 63324 -0.9 59 37 Op 2 . + CDS 63339 - 64508 1510 ## COG0438 Glycosyltransferase + Term 64523 - 64562 9.1 + Prom 64531 - 64590 6.8 60 38 Tu 1 . + CDS 64663 - 65172 548 ## gi|241758644|ref|ZP_04756758.1| cold-shock DNA-binding domain protein - Term 65181 - 65252 16.1 61 39 Tu 1 . - CDS 65266 - 68751 4250 ## COG1196 Chromosome segregation ATPases - Prom 68924 - 68983 6.2 - Term 68982 - 69023 5.0 62 40 Tu 1 . - CDS 69129 - 71882 2077 ## Dvul_2968 outer membrane autotransporter - Prom 72065 - 72124 9.4 63 41 Tu 1 . - CDS 72335 - 72682 221 ## COG1196 Chromosome segregation ATPases Predicted protein(s) >gi|241321127|gb|ACQV01000008.1| GENE 1 26 - 343 581 105 aa, chain - ## HITS:1 COG:NMA0986 KEGG:ns NR:ns ## COG: NMA0986 COG4390 # Protein_GI_number: 15793943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 105 1 105 106 140 70.0 4e-34 MSFQDNLATMPAIDHLSGLDILDKEGNVVHHIPNVPGKQGSLKLYHALAQEFDGKLDSAA AERGLAWFAEHVADAEANPGKHPNIDLLFKVKTDNTSLTLKPLAA >gi|241321127|gb|ACQV01000008.1| GENE 2 441 - 1067 1057 208 aa, chain - ## HITS:1 COG:NMA0985 KEGG:ns NR:ns ## COG: NMA0985 COG0035 # Protein_GI_number: 15793942 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 403 96.0 1e-112 MNVTVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEASRDFEIEKYIIDGWCGS IEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQRDEETLKPVSYFEKFVDS MAERPALIIDPMLATGGSMVATIDLLKAKGCSNIKALVLVAAPEGVKAVNDAHPDVTIYT AALDSHLNEHGYIIPGLGDAGDKIFGTR >gi|241321127|gb|ACQV01000008.1| GENE 3 1214 - 1525 581 103 aa, chain - ## HITS:1 COG:NMA0984 KEGG:ns NR:ns ## COG: NMA0984 COG0278 # Protein_GI_number: 15793941 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Neisseria meningitidis Z2491 # 1 103 1 103 103 206 97.0 9e-54 MSSIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAGCTDYVTVNVLENDAVR QGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLKA >gi|241321127|gb|ACQV01000008.1| GENE 4 1614 - 2864 1179 416 aa, chain - ## HITS:1 COG:SPy1670 KEGG:ns NR:ns ## COG: SPy1670 COG0014 # Protein_GI_number: 15675534 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 415 1 415 416 575 71.0 1e-164 MSYIEQLGKNAQKASKTLISLGSVEKNNLLRQVAAALVEQAEMILAENARDLAAAKENGI SDIMLDRLRLNHERIKGIAEGVEQVADLQDPIGQVVRGYTNLDGLKIVQKRVPLGVVAMI FESRPNVSVDAFSLAFKTGNAIILRGGRDAIHSNTALIAVIRQTLVKAGMDADVVQLVED TSHAAAEELMQAVDYIDVLIPRGGARLIQTVKEKSKVPVIETGVGNCHIYVDDSADLEMA VDIVVNAKTQRPSVCNAAESLVVHEKIAEAFLPKLEEAVTKVHPVEFRADQEALRMFKNA VLATEEDYSTEFLDYIMSVKIVKTVEEAVDWINGHTTHHSEAIVTQSIAHAEYFQESIDA AAVYVNASTRFTDGFVFGLGAEIGISTQKMHARGPMGLEALTSTKFYINGNGQIRR >gi|241321127|gb|ACQV01000008.1| GENE 5 2874 - 3677 889 267 aa, chain - ## HITS:1 COG:SPy1672 KEGG:ns NR:ns ## COG: SPy1672 COG0263 # Protein_GI_number: 15675535 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Streptococcus pyogenes M1 GAS # 1 265 2 266 273 417 81.0 1e-117 MKRDFEAVKRIVIKIGTSSLVLPNGKINLAKIDQLAFVISSLVSKGKEIVLVSSGAMGFG LNVLNMEKRPAEMAQQQAVSSVGQVAMMSLYSQIFSHYRMTVSQILLTRDVVEYPESLAN VTNAFESLLSIGVIPIVNENDAVSVDEMDHATKFGDNDRLSAVVAKIVKADLLIMLSDID GLFDKNPAVHADAKLRSHVADITEEIIASAGGSGSKFGTGGMLSKIKSAQMMFEHHGQMV LMNSANPRDILQVLDGAPIGTWFAQEK >gi|241321127|gb|ACQV01000008.1| GENE 6 3943 - 4728 1198 261 aa, chain - ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 1 260 1 260 261 510 95.0 1e-145 MNPFLNTAFKAARKAGQMMIRAAGNLDAVKVDSKAFNDFVSDVDRSSEMILVEALKEAYP HHKITCEEGGSHGKATAEYEWIIDPLDGTTNFLHGHPQYAISMALLHKGVLQEALVYAPE RNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVVDQSMMDKYLAILKDFLAKTA GGRREGAASLDLCAVAAGRLDGFFEFNLKPWDIAAGALIVQEAGGIVTDMSGDEGWLESG DIVAANPKVLAQMLKIISEHQ >gi|241321127|gb|ACQV01000008.1| GENE 7 4904 - 5719 1214 271 aa, chain + ## HITS:1 COG:NMB1348 KEGG:ns NR:ns ## COG: NMB1348 COG0565 # Protein_GI_number: 15677213 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Neisseria meningitidis MC58 # 1 271 1 271 271 512 97.0 1e-145 MTSEKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLNKLTIVAPNLMATPMTENPP VFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALADTTIACALTSRRREITAPL QTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVQACNRLMTINGNPDYFSLNLAQAV QVVCYEIFSQTDSPMTHLQQEDHAATHEQIKGMVAHMESVMNDIGFFNRRNGERLMRRMQ SLFGRANTQTEDIDILRGFFNTVSHRIHKKD >gi|241321127|gb|ACQV01000008.1| GENE 8 5781 - 6629 786 282 aa, chain + ## HITS:1 COG:NMB1349 KEGG:ns NR:ns ## COG: NMB1349 COG3782 # Protein_GI_number: 15677214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 282 1 285 285 465 81.0 1e-131 MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELSVRELLGEHGFRYLLVLDADPAPL KKHLAQRAPFGHRLGIYAEELLAFWFANAPHAKLHAYNLPVFSDGQTLGAADFVVSLNQK PYHIELACKYYGGDQVQNLRGLNPKDTLTDKAAKLVQQSKLLHTPQGKATLATQALPKNP LPASIVRGIGFFPQGFHAFEPPLNPYGWRGVYIQDWAEYGFERQEARYHLLDRMAYLTPA RVAETETLNATEIRRIDQGLIAVLELRPDGFWHEIERIMKAV >gi|241321127|gb|ACQV01000008.1| GENE 9 6664 - 7923 1794 419 aa, chain + ## HITS:1 COG:NMA1563 KEGG:ns NR:ns ## COG: NMA1563 COG0144 # Protein_GI_number: 15794456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 776 96.0 0 MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHEIAETAFAALRHYQKIS TALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLGNLKARKTEFSDGLNTAAE LPQWLVEQLQQHWSEEEILAFGRSINQPAPLDIRVNTLKGKRDKVLPLLQAESADAEATP YSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALLVGAKRGEIIVDFCAGAGGKTLA VGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNIHPERISSEHDTRIARLAGKADRVL VDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQHSILDAASKLVKPQGRLVYATCSVLPE ENELQVERFLSEHPKFELVNCAELLQSLKIDLDTGKYLRLNSGEHQTDGFFATVLQRKD >gi|241321127|gb|ACQV01000008.1| GENE 10 8188 - 9456 1865 422 aa, chain + ## HITS:1 COG:VC1621 KEGG:ns NR:ns ## COG: VC1621 COG1538 # Protein_GI_number: 15641628 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Vibrio cholerae # 19 396 16 410 445 69 20.0 9e-12 MSHSYSSPTKPRFLSSAVAVACCLLPFQTASAYSLQDILRDALVSDPIVREAKATQEAAQ STTKATHARHYPVVTLTGTKVLAQHNKYSSNNMEDGVGVRGSLNIYSWGAIEAAVRRDRS REEYYQHKYTESQEQLGSDIGRLYLSALRAKETLVLNEQTLARHNNLLKDLDTIVKYDAG RRSELIEARARQLQVANIIAQQRRTMDLALSRLSRYTSRQLTANDLEDPFKNDTAKSISE RFNNPNRNNNPSYQAQLAERDSVRADLDASKAERLPALNLEGSATRNTRQLYLNVAWNVL DIAARHNVERNAKSLIAAEAKSEQILRDMNERVKTSAIDMQESEQRTVLTAQHIAAQKEV IKVYELQFKIARRTLTDVLSAYSELSSIEQDYVAARNDFRDAALDYLNTQAKISAWVGLA QK >gi|241321127|gb|ACQV01000008.1| GENE 11 9500 - 11716 3425 738 aa, chain + ## HITS:1 COG:VCA1084 KEGG:ns NR:ns ## COG: VCA1084 COG2274 # Protein_GI_number: 15601834 # Func_class: V Defense mechanisms # Function: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain # Organism: Vibrio cholerae # 4 703 5 697 704 463 36.0 1e-130 MKAIIEHIVLVTRLLGAPVSEAALSAEVVRDKKLKVNYHSLVEVLRSHGFENTLSKRNLE DIPSLAVPVMIILHNEEAAVITQIEGSGQERKYHIRQVDGLEQELSHEQLSGLYLGYCWF IKPKMATDMRSELPEYHLPKAWFWKVIWRFRSYYYQVILATIIINFLALVSSLYVMNVYD RVIPNQAYETLWVLSIGVVLAILFEFAAKMIRGHLTDIAGKKADLIISSALFRRVMALRL ADRPASSGSYASNLREFEAVREFMTSASLLTIVDLPFLLLFIFVISMVGGKLALVPLTII PIVVIVGFVVQRPLSRHINESMKEGSQRSGLAVEAIEGIETLKTNNATSWAQQRWDEYTA KTSASSIKVKDTSNFMVNFAVAMQQLNTVFLVVVGTYLIHADNHAERITMGALIASVILS GRALAPLAQIAGLATRFQQAKLALKGVNDIVTRPIERNPERKYITLDNVQGSITFENVSF KYQADNNSAVEDLRLTIKPGEKVGILGRIGSGKSTMLKLASGLYDTEKGNVTLDGVDMRQ LDPNFLRDQVLLLSQSPRLFLGTLRENMDLARTGSYSTDQDLLTALNRFGLDKIIRNHPR GLDMPLGEDGLGLSGGQKQIIALARMTLRNPRVVLLDEPTTSLDQATERMALNAIAQWGR NRTMLLVTHRPQVLQIVNRIIVMDNGKVVMDGPRDLVLQKLMQNEQAKAANVKQQQQQAA AVKQQQQQAAAAPQSAAQ >gi|241321127|gb|ACQV01000008.1| GENE 12 11804 - 13033 1974 409 aa, chain + ## HITS:1 COG:STM2692 KEGG:ns NR:ns ## COG: STM2692 COG0845 # Protein_GI_number: 16766006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 22 409 6 387 387 311 43.0 1e-84 MSRENNVKSKDLHLINDLNAALQKEKHSGQFWVIILFFLFLIVFVVWAYNSPVEEVTRGN GNIIPSSREQVIQSLDPGIVTEIMVKEGDMVEKDQILMKLDDTRSSAVLRESEAKVENLE ATIARLKAEAYDIKLSFPDSVGPELRRREIAAYKARRQAMTDAVSGLSQSKAALDREIAI TAPMVAEGVVSEVELLRMRRDSADLATQISERRNRYKADANNELLQAESELAQSKENVAM RADPVERSQIRAPMRGIVKGIKVTTIGGVVNAGEDIMQIIPVDDKLLVEAYIRPQDIAFI RAGQPALVKVSAYDYSIYGGLEGKVTLVGADTVSNSMQNRANDLKLDPNQVYYRVLVQTE NNSLKDKNGKPMPIIPGMVATVDIKTGEKTIFQYLIKPITRMKQALSER >gi|241321127|gb|ACQV01000008.1| GENE 13 13095 - 14183 1295 362 aa, chain - ## HITS:1 COG:NMA2039_2 KEGG:ns NR:ns ## COG: NMA2039_2 COG0077 # Protein_GI_number: 15794919 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Neisseria meningitidis Z2491 # 90 362 1 273 273 465 85.0 1e-131 MPLSIDEQLLPHRNAIDSIDAEILRLLNERAGHAHAIGELKGTGAVYRPEREVAVLRRIQ DLNRGPLPNESVTRLFREIMSECLAVERPLTIAYLGPKGTFTQQAAIKHFGHAAHTMACT TIDNCFKQVETRQADYLVAPVENSTEGSVGRTLDLLAVTALKACGEVVVRIHHNLLRKDS HEIGGITKVFAHAQALAQCNDWLGRNLPNAERIAVASNAEAARLVAESDSPNVAAIAGRI AAEIYQLSFAAECIEDEPNNTTRFLVMGHQETGRSGNDKTSLVVSAPNRAGAVTSLLQPF TELGISMTKFESRPSKSVLWEYLFFIDIEGHQSDENVQKALQLLGERASFVKVVGSYPTV VL >gi|241321127|gb|ACQV01000008.1| GENE 14 14355 - 14825 549 156 aa, chain + ## HITS:1 COG:NMB0457 KEGG:ns NR:ns ## COG: NMB0457 COG0802 # Protein_GI_number: 15676368 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Neisseria meningitidis MC58 # 8 151 8 151 153 233 78.0 1e-61 MHSNGLYTRFLPDEEATLKLGKEWSKQLSAPLTIYLEGGLGAGKTTLTRGILRGLGHTGA VKSPTYTIVESYPLDTFTLHHFDLYRFTMPEEWEDAGLDELFAPDSVCLIEWPQQGGEFT PPADITITLTYTDKGRTCTFSAHTNQGRKSLESWSN >gi|241321127|gb|ACQV01000008.1| GENE 15 14813 - 16060 1518 415 aa, chain + ## HITS:1 COG:NMB0456 KEGG:ns NR:ns ## COG: NMB0456 COG0860 # Protein_GI_number: 15676367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Neisseria meningitidis MC58 # 1 415 1 416 416 615 75.0 1e-176 MVKLTRRHILRQGTGLFLTLTPVGAALAKPASPAQFLAVRIWPAHAYTRVTLESNHSMKY QHFMLDNPSRLVVDIQGAEINSVLQGISSKVLSNDPFIRSIRAGQNTPNTVRIVIDLKQS THPQVFALAPVGNFKNRLVIDLYPHGADANDPMMALLNGNIPKQRPNTNIAYDTPAPKSN RGSGGNRRPVIMIDPGHGGEDPGAIGPSGLKEKNVVLSIARETKKRLEALGYNVFMTRNE DIFIPLGVRVAKGRARNADVFVSIHADAFTSPSARGTGVYMLNTKGATSSAAKFLAQTQN NADAIGGVQTSGNPNVDNAILDMTQTATLRDSRKLGHSVLTELGKLNQLHKGRVDEANFA VLRAPDVPSILVETAFLSNPTEERLLGSESFRQQCAQAIATGIQKYINTAVLRRG >gi|241321127|gb|ACQV01000008.1| GENE 16 16127 - 16729 609 200 aa, chain - ## HITS:1 COG:no KEGG:Pcryo_0464 NR:ns ## KEGG: Pcryo_0464 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 10 199 27 239 255 145 36.0 6e-34 MKMLGRGLVVLVLCALTAAGGWFYALHGQNEEHQVLSREGVLMQIKQMNRLESTAFYIDT IIRTEKKGDWRRLWQDSQSGIFIVRGKVLAGLDLDKLGADNVNIVDDKVIISLPAVEILS VDLENIEVYDIQTGSFNLLPMDKSVFKTVQEEAKRQVLQSACKAEILEHANRQAQTQLEN LFALTQTKVSVYPAAVGKCG >gi|241321127|gb|ACQV01000008.1| GENE 17 16929 - 18269 1902 446 aa, chain + ## HITS:1 COG:NMA1429_1 KEGG:ns NR:ns ## COG: NMA1429_1 COG0108 # Protein_GI_number: 15794338 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 84 287 1 204 204 393 97.0 1e-109 MNTTDLRRHNLRQWITQHHNGQQTKFAQAIAINQGELSALLKNKSFGEKKARKIEQAANM PDMWLDQDHQDRHTPTISQERNTMSHISTIPEILADIKAGKMVIITDAEDRENEGDLLMA AQFVTPEAINFMIKNARGLVCLPMDGEMVEKLGLPMMTQKNGAQYGTNFTVSIEAAHGIT TGISAADRALTIQTAVSPSAKPEDIVQPGHIFPLRAQKGGVLVRAGHTEAGVDLAQMNGL IPAAVICEIINDDGTMARMPELMKFAEEHNLKIGTITDLIEYRSRTESLLEDMGNSPVQT PWGEFQQHVYVDKLSGETHLALVKGTPTADEETLVRVHEPFSVMDFIQANPRHSWSLPKA LERIQQAESGVVILLHRTEDGATLLDRTLPKGANQAYKWDSKSYGIGAQILAGLNVKKLR VLGQPSSFTGLTGFGLEVVGFEEAEK >gi|241321127|gb|ACQV01000008.1| GENE 18 18524 - 21955 3737 1143 aa, chain + ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 28 443 146 489 989 158 31.0 6e-38 MSAFTPKPKIIILSLASAFSTLTVADTIEASARPEQYQELDTVVVSGKRTNDQKGADDVY YKNVSNAYVGKEYLERYRVQSAGDVLKGLNGVYNMNTRTAGGAITPNIRGITGKGRIPVT VDGTEQTIDVWMNNYGVGDRNYLDPALFRSIAVEKSPALTRGVKSGVGGAVTIHTIEADD IVPEGQKFGFQLKTEFSNNSNKQANNLNQWLGWEDYRTLPFGATADGAGGGVDPHTGQQS PQALVADGLTPPKHKSSRDNRRFGNDRGYMAAAAFKTELSDGLAAYSYRNKGNYFAGRKG AEGYLHNPVYDLQKCYDQGGSDFNCKNSATFVPNMAKVYHPGVEVLNSNTETKTLLLKNN WHLPGSHKLGWQYMRTDVRFGEINPFHTTYVMNMEEYNPSNRPKALSPQMQSIDSNIRTD TYKLGWNWKPENSRWIDLQANLWRIKTNTTRHQSGGMDLSAAKPDPYYDVWHWCTKRGQL PPDYADSYSSCSSLMDDFGVNGLSKEEVMKILPNDNGQYRVLSGAEQKTRVSRTGFDLNN RFRLHPRLHMTLSADYQNEKLEEEVEVVNSQDMFNLAGMATGMTKIAGPRGGKRREWGTN LVFDWQATDRLKISAGIRYHNFRSFDTALAEGRARRDPRYQAGGGHGTYSDGVYIPYFEL VGDQERRDWEAVSEQSRRAHQSGNDAAIAAADRAMQAHGARYKLPKYYNSSDYRVADQYQ YIGSDGLAYGDGTGYDDYQNHPLYRVRPVYVPFVNGKLDSGSLPEHFHDFVKNYQEKVAN PQGLNQAHYRYWTGLGNPKNCIRSNENSCMDTWPGKLTNMSVGYPETGGDTGSGDKIINK HYTEEQRWAQPKPIRAHAWAPTVAVSYDLTDNNRLFVRYAQMTRFPSVYEVGSFYNDLAY VGSPKAPNFRFKPERSRSLEIGYNFNFAPHFARLRQGDMRLTYYRNRIRNVIETTDHFRT VQYDSKDTAGLEWQGRIDSGRFFAALGATYRLKQQMCDRDTAFDYDPYGYKGVPICIEGG YGSTRGYHALQPKYSVNLDAGMRALGEKLEFGLRGIYHSRVNTKQYDQLLKRGFGHIFNS TGKPYHWNPSLTWDVYGRYQVHKNLNVNLGITNLTNRYYLDPMSNVPAPGPGRTVTFGLT AKF >gi|241321127|gb|ACQV01000008.1| GENE 19 22115 - 23122 1175 335 aa, chain + ## HITS:1 COG:no KEGG:NGK_1375 NR:ns ## KEGG: NGK_1375 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 57 327 1 259 268 344 68.0 3e-93 MSIFKQTLLAATLCGVFGVAAAAPEGGSSQTDIDKKPTVVKPGESDSQPFGEGKAGLAFS TDNGHSWSNSINLEDGPVKHIGIKYNIKYKQGTQKVPINGNDPYANVDGTRNPKHLRLGD VKPVVGWFYNPKLGQVWYENRHNNTEVYSVRQITEPKLPFAPKFGGLVIAKVPGMGGSDG NVFFGEWAPRKGNPPDNSTDLNMADGKRTVWFVGDNPTKNLGNLQIASADYHVVGINKHT PGKNDFYTGQVKAEFGSKGVMSGSISRGDDKLSFDHTKINLKEGTFSSKNSANKEGIEGR FYGADAAALAGYATRGNGVGDDVAFGGKRFSSTPK >gi|241321127|gb|ACQV01000008.1| GENE 20 23289 - 24776 1550 495 aa, chain + ## HITS:1 COG:no KEGG:NGO0555 NR:ns ## KEGG: NGO0555 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 4 495 6 497 497 913 94.0 0 MKRCLLFLSLCSVCLTAYADDPADERRRLLDEGSRQTQQYRESGWLDTEQARGEVEENDG YISIGGEIYQVGDTAEELESAIYHALNARQWHKVRQFAARYAKLPRHKPALIHLADALQK RDEGDFRTAGNSFQTALEAEPNNPRLLLEAGRFYAEDNQNKESAAAFEKVLKTDIPAETR PIVENYLSELGKRRRWHGQISLGYGYNSNVNQGNGINQCVWEIAGMCLMERTLPAPTDST FSSYSATAEKTVPLKGHHGVQVRGVLYGNRYTEKDKDSAAMPDYGYHNGSLYAGYAYADA RSSFSLLPYFEYDFRNRHTHYRAWGADADWSHTLSPRWRINSHAGAKKTGYSGQNKDYFA DYKQYELGVGAEFSLTPKSGLFANFDAARKAYPEKSSSSKEYTTRLGAYSFFSSGTYLNA ILLYRRSLYDAASFVSDNKRRRDKQYIMMAAAGFPQWNIKGVYPELRFRRTIAHSNAVYY RYRQNEWLLGFKYRF >gi|241321127|gb|ACQV01000008.1| GENE 21 24904 - 26688 2328 594 aa, chain - ## HITS:1 COG:glgP KEGG:ns NR:ns ## COG: glgP COG0058 # Protein_GI_number: 16131302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli K12 # 4 585 230 813 815 744 61.0 0 MCQSIALVDAHAGNLFDLTDFNRGDYASAVRAQNSDENISRVLYPNDSTESGRELRLKQE YFLVSSSVQDIVARHKCRFTSIKNLANKVAIHLNDTHPVLAIPELMRILIDEEGIAWTEA WNMCCKIFSYTNHTFMSEVLETWPVDLMGRLLPRHLDIIFEINAYFLNALRAIGNFDDDF VRRVSIIDETHGRRVRMAWLAVIGSHKVNGVAKIHSDLMTTSIFVDFTKVFPERFTNVTN GVTPRRWINIANPGLTKFLDKHLGNEDWRLHLDNLTKLNDKVDDASVQAEFGEVKKAAKE RLAKYIETELGIKVNTDALFDIQIKRIHEYKRQALNVMHIVDRYNKILENPDFDWQPRVF IFAGKAASAYYMAKKIIRLINDVAKVINNAPRIRDLIKVVYIPNYSVSLAQIIIPAADLH EQISLAGTEASGTSNMKFALNGAICMGTLDGANVEILEKVGADNCYIFGNTVEQVEEIRH NGYDPLSYIERDSDLRRVVNRISQGTFFPEEPNRYNDVLQPYGDFYQLMADFRSYIDTQY KADEHYRNVSAWRKSALINIANMGFFSSDRSIADYCRDIWYIKPLSEKELPGRN >gi|241321127|gb|ACQV01000008.1| GENE 22 26517 - 27155 683 212 aa, chain - ## HITS:1 COG:PM0545 KEGG:ns NR:ns ## COG: PM0545 COG0058 # Protein_GI_number: 15602410 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Pasteurella multocida # 2 165 77 240 818 191 58.0 1e-48 MVYYLSMEFLLGRSFVNALINEGVYAEFEEAFKQLGKEFADVCEQEEDPGLGNGGLGRLA ACFLDSLATLRIPAMGYGIRYQYGMFKQEIVDGQQVEKPDLWLDQDLAWQFARPNKQYSV RFGGQVLNLGDKKEWQPSEGISVWTYDEIIPGYGGECANPLRLWTHTQATCLTLPTSTEA ITLPPSVRKTAMKTSHASCIRTTLPNLAVNCA >gi|241321127|gb|ACQV01000008.1| GENE 23 27098 - 27382 305 94 aa, chain - ## HITS:1 COG:HI1361 KEGG:ns NR:ns ## COG: HI1361 COG0058 # Protein_GI_number: 16273271 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Haemophilus influenzae # 9 70 8 69 821 67 48.0 9e-12 MAKKKLPISGYDYVMPKPDAETIRKSIVYKLIFILGVDPKEATSHQWLNAAMLAARDLIA EDFLKTRRATSTTANAWFITCLWNSCSAVRLSTR >gi|241321127|gb|ACQV01000008.1| GENE 24 27707 - 29692 2103 661 aa, chain - ## HITS:1 COG:HI1358 KEGG:ns NR:ns ## COG: HI1358 COG1523 # Protein_GI_number: 16273268 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Haemophilus influenzae # 11 630 8 631 659 650 52.0 0 MTAKSWHIEEGKPYPMGATLTSKGANFTLFSINAEKVELCLFDKDKETRLEMPSRRGSVF YGFVPDVKAGQQYGFRVYGRENAEYSSCFNPNKLLIDPYSKKIDGKPSYRTAEEMAWFRP EDERDNAAVAPKSVVIGRSRFNWAKDCRPEIPWGKTIIYEAHVKGFTKQFPDLKYAGTYK ALSDKRVLAYLQELGVTTVELLPIHYHLDEYHLQQMGLSNYWGYNTYSHFAVEPSYADNP ERAAAEFKQAVKALHQAGLEVILDVVYNHTAEQDDKGPMLCQRGIDNTLWYWHTSYGSYE NWSGCGNTLNIVRRDVTRWAADSLRYWAEEFHVDGFCFDLGTVLGREPDFQSYGRFFQVL YQDPVLAGLKLIVEAWDIGEGGYHLGNFPQPFTEWNGRFRDDMRAFWSWESGNLGAFAER LAGSSDIFNHSGRRPSASINFITAHDGFTLRDLVSYNEKHNEANGENNRDEHNENISYNH GVEGETDDEEVLLNREYTSKALLASLFLSNGTPMLLAGDEFGNSQQGNNNSYCQDNPITW LDWQNKSHVLQSYTQELIRVRSQIKLLTDDCWWEKERVQWLNADSSPMTEYCWHNRGSKA IQIVLDDEWLLLVNAKRSRQLFNLPQGNWEISCVPSEKLNYEGPGKCVVEHMGIWILHKT N >gi|241321127|gb|ACQV01000008.1| GENE 25 29793 - 30389 536 198 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 193 20 213 216 189 51.0 3e-48 MKQLGLKAKIRAKKAYRHPTMGAISEHLLKRRFTAKKPNEKWLTDVTELKGKDGKLYLSP ILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAE HSMIQNMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQIDDYMDYYNRERCSL KLKKLSPVAYRTQLAQSA >gi|241321127|gb|ACQV01000008.1| GENE 26 30593 - 30943 499 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 116 251 366 366 228 94.0 1e-58 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT EHRKNPFIADKPDHEKTQAELIEELCHMRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241321127|gb|ACQV01000008.1| GENE 27 31231 - 31977 1052 248 aa, chain + ## HITS:1 COG:BH0360 KEGG:ns NR:ns ## COG: BH0360 COG3338 # Protein_GI_number: 15612923 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus halodurans # 20 244 42 269 275 189 41.0 4e-48 MLNKHLFLSLLMAVSTATVSAETHHAHWSYTGENDAAHWGDLSEDFAVCKTGKQQSPVDF STTKAVKGKQLAYRYNVADYKVENNGHTLQATPQGKAQTIVINGKTYTFKQFHFHTPSEH TFKGRHFPMEAHFVHQAEDGTLAVIGSVFKPGKNNPALSALTAKKLKAGESVTLNNLNIQ ALLPKDSKSFQLKGSLTTPPCSENVTWVVLKTPVQADAAQFKAMRDIIGGENNRPVQPLN DREVNEDK >gi|241321127|gb|ACQV01000008.1| GENE 28 32041 - 33675 2391 544 aa, chain - ## HITS:1 COG:NMA1742 KEGG:ns NR:ns ## COG: NMA1742 COG0504 # Protein_GI_number: 15794635 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Neisseria meningitidis Z2491 # 1 544 1 544 544 1070 96.0 0 MTKFIFVTGGVVSSLGKGIAAASIATILESRGLNVTMLKLDPYINVDPGTMSPFQHGEVF VTDDGAETDLDLGHYERFINATMTRRNSFSTGQVYENVIAKERRGDYLGGTVQVIPHITD EIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMRSQLGRNNTLFAHLSYVPYIA AAGEIKTKPTQHTVKEMLSIGLQPDILICRMDREMPADERRKIALFCNVEERAIVGSYDV DSIYECPEMLHNQGIDSIITEQLQLNVKQADLTEWKKIVHAIQNPKHTVKIAMVGKYVDL TESYKSLIEALKHAGIHTETDVQITFVDSESIEKDNGDVSMLKGMDAILVPGGFGSRGVE GKIAAVRYARENNVPYLGICLGMQIALIEYARDVAGLKGANSTEFDLKCAAPVVALIDEW QTADGSVETRDESADLGGTMRLGAQEVDLKPGSLAAKIYGSEHIRERHRHRYEVNNNYVP QLEKAGLVIGGVSAGRERLVETIELPNHPWFFACQFHPEFTSNPRKGHPLFSAFVKAALG NKKA >gi|241321127|gb|ACQV01000008.1| GENE 29 33800 - 35455 2122 551 aa, chain - ## HITS:1 COG:NMA1743 KEGG:ns NR:ns ## COG: NMA1743 COG0318 # Protein_GI_number: 15794636 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis Z2491 # 1 551 1 551 556 1007 88.0 0 MEKLWLKSYEQGVNSEIDISQYSSISDVFRQSVEKFADKPAFQNMGKTLTYAEVGKLATD FASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAVNTNPLYTPRELEHQLKDS GATTIVVLENFANTLELVLPRTQIKHVIVASVGEMFGMIKGALMNFVIRKVKKMVPEYRI PNTVTFQTALKQGAANSFKPVELTRDDTALLQYTGGTTGLAKGAVLTHGNICANMLQAKE WIKNSLHEGKETVIAALPLYHIFALTVNLMIFANTGSKIILITNPRDMKGFIGELKKEPI SVFIGVNTLFNVMVNRPDFAEVDFSRLKLTLGGGMATQRAVAEKWKQITDTPIVEAYGLT EASPGVCCNPLNIEAYSGGIGLPVSSTEVELRDADGKEVPIGQPGELWVRGPQVMKGYWN RPEETAKAIDARGFLETGDIAVMDEKGWLKLVDRKKDLIVVSGFNVYPNEIEEVVAGNDK VLEVACIGVASEKTGEAIKVFVVRKDPSLTKEELIDFCRKELTAYKVPKDIEFRDELPKS NVGKILRRELR >gi|241321127|gb|ACQV01000008.1| GENE 30 35550 - 36653 1219 367 aa, chain - ## HITS:1 COG:NMA1744 KEGG:ns NR:ns ## COG: NMA1744 COG0482 # Protein_GI_number: 15794637 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Neisseria meningitidis Z2491 # 1 366 17 382 383 712 93.0 0 MNTTNTPTNIIVGLSGGVDSSVTAALLKQQGHQISGVFMQNWEDDDNDEYCSIKQDSFDA IAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDYAIEQ GADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGELEKPEVR RLAEEFKLPTATKKDSTGICFIGERPFREFLQKYLPTNNGKMVTPEGKVVGEHVGLMFYT LGQRKGLGIGGAGEPWFVAAKDLTQNELIVVQGHDHPLLYTQSLVMNDLSFTLPERPKEG RYTCKTRYRMADAPCTLRYLDDETVELVFDEPQWAVTPGQSAVLYDGDVCLGGGIIMSTD KPVIITA >gi|241321127|gb|ACQV01000008.1| GENE 31 36779 - 37258 814 159 aa, chain - ## HITS:1 COG:NMA1745 KEGG:ns NR:ns ## COG: NMA1745 COG2847 # Protein_GI_number: 15794638 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 159 1 157 157 241 83.0 4e-64 MKKLMATLILAGLATSVSAAGIHIEDGWARSTVEGMKMGGAFMKIHNDEAKKDFLVGGSS PVAERIEVHTHVNDNGVMRMREVKGGIPLEAKDVTELKPGSYHVMFMGLKKPLKEGEKVP VTLKFKNAKPQTVQLEVKTAPQSGMDHGHGHGHGGAHQH >gi|241321127|gb|ACQV01000008.1| GENE 32 37390 - 37773 385 127 aa, chain - ## HITS:1 COG:NMA1746 KEGG:ns NR:ns ## COG: NMA1746 COG0818 # Protein_GI_number: 15794639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 127 161 70.0 3e-40 MKPSSYASEKKGKSGIKRIINAFGYSKDGLAAAYRYESAFRQVFWLNLILIVLALFLDFG PVTKMVLVVASFISLITELFNTAIEAAVDHTSTEKHELAKRAKDAGSAAQLMALLMLFIV WIVALTA >gi|241321127|gb|ACQV01000008.1| GENE 33 37841 - 38797 313 318 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 1 312 1 318 345 125 30 8e-28 MKVLFIADPMASFKTYKDTTYAMMREMAKRGWQLFHTLSGELSVREGLVVAQAAAFEFVG AKNDDDHEWFKAEAKVQTALKDFDAVIMRTDPPFDMQYLYATQFLTLAQQQGAKVFNSGQ AMRDFNEKLAILNFSQFTAPTLVTTRSADVRAFLKEHGDIIIKPLDGMGGMGIFRLTESD PNIGSILETLIQLDSRTIMAQRYIPEIVHGDKRILIIGGEVVPYALARIPQNGETRGNLA AGGRGVAQELSERDREIAETLAPELKHRGILLAGLDVIGSNLTEVNVTSPTGFQEIMKQK DFDVAAMFADAVASWAKQ >gi|241321127|gb|ACQV01000008.1| GENE 34 38913 - 40574 2434 553 aa, chain - ## HITS:1 COG:NMA0952 KEGG:ns NR:ns ## COG: NMA0952 COG0497 # Protein_GI_number: 15793909 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 552 1 552 557 857 88.0 0 MLLALSLRDFVIVENLNLDFQNGFTVLTGETGAGKSITLDAIGLLLGDKADYSQVRSGAK EAQLSALFDISGLPELKAQLQEQGLLEEDAEELSIRRIIDAKGKSRSYINNQAVTLAQLK AIGEQLIDIHGQNAHHSLNQESAQRELLDAFAGSKEQAETVKQLYQNWVNAKKALQEAQE QAETMAIERERLEWQFNELNQLELKPNEWETLSQSHDSLAHSAELLQTAEQVGDSIDGDN GIQRQIYQCQKLLGNLQNIEPRFAESLNMLASIEAELGEISANMRDVAGRSDIDPNELAA QESRMGELMSMARKYRIEPEELPQKLAEIDERLQNLQAAADLEALENTVARNLAEYHEAT YILSAMRHQAAGRLGEETTEHMQHLAMKGARFDIVLLPSSPTAHGLEQVQFQVAANKGNP SRPLNKVASGGELARISLALQVVASQYTQVPTLIFDEVDTGIGGGVAEMVGKALRALGKK HQVLAVTHLPQVASCGENHWQVRKHSEGEQTVSEISVLNHHQRIEEIARMLGGEIITDTT RSHAAELLHLAAA >gi|241321127|gb|ACQV01000008.1| GENE 35 40774 - 41154 418 126 aa, chain - ## HITS:1 COG:HI1706 KEGG:ns NR:ns ## COG: HI1706 COG1292 # Protein_GI_number: 16273593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Haemophilus influenzae # 1 126 544 669 669 181 65.0 2e-46 MQELKDELTEKYNMDVEIRCLLQQDEPSVELVVHKGTVRDFVYGIKSVKREITDQLIRED GLPHFKYAATFIPSTYFSDGRDRYDVQYMTQKELIADMLKQYERYLNLLAGVGQKLMGHE QVELAE >gi|241321127|gb|ACQV01000008.1| GENE 36 41214 - 41447 288 77 aa, chain - ## HITS:1 COG:NMB1277 KEGG:ns NR:ns ## COG: NMB1277 COG1292 # Protein_GI_number: 15677144 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Neisseria meningitidis MC58 # 1 75 452 526 675 94 61.0 6e-20 MWGLLISAVAIVLLGAGSLLILQTMTLIASLPFAVLMIFMMVSLWKALNNDAKYFATAVN PGSIFWSGDHWRERLGK >gi|241321127|gb|ACQV01000008.1| GENE 37 41519 - 42127 831 202 aa, chain - ## HITS:1 COG:NMA0951 KEGG:ns NR:ns ## COG: NMA0951 COG1386 # Protein_GI_number: 15793908 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Neisseria meningitidis Z2491 # 1 196 1 195 200 315 88.0 3e-86 MTEKLSPDALIEAALLTQVEPLNEKTMRELCVPPLSQDKLIDVLAQLKARWQGRALQLVH THEGWRFQIAQAAFERLGSLQEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQ NVMQILQDRGWIEVIGHRDSVGRPALWATTATFLSDLRLESLEELPPLTELGELVLPDLM ETPPTGDEEAEEAVESGNRLIN >gi|241321127|gb|ACQV01000008.1| GENE 38 42197 - 42463 349 88 aa, chain - ## HITS:1 COG:NMA0966 KEGG:ns NR:ns ## COG: NMA0966 COG0526 # Protein_GI_number: 15793923 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 12 86 1 75 77 120 78.0 7e-28 MAAFVPPRVTAMKLTLMFREYCSLCHKMREQLKPYQEQFGFELDIVDVDEDPVLEEKYNE LVPVLLDGDTEICHWFLDEEKLKAHLSA >gi|241321127|gb|ACQV01000008.1| GENE 39 42580 - 42780 349 66 aa, chain - ## HITS:1 COG:NMA0965 KEGG:ns NR:ns ## COG: NMA0965 COG2906 # Protein_GI_number: 15793922 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 66 1 66 66 82 86.0 2e-16 MFVCICNAITDHDIKETIAAGATTMSDLQAQLGVATCCGCCGELAASFLTASSAQNTVTA GINVQS >gi|241321127|gb|ACQV01000008.1| GENE 40 43008 - 43880 913 290 aa, chain - ## HITS:1 COG:NMB0751 KEGG:ns NR:ns ## COG: NMB0751 COG4974 # Protein_GI_number: 15676649 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Neisseria meningitidis MC58 # 2 290 3 291 291 383 66.0 1e-106 MDDLIDKLLESLWLQDRLSHNTLQSYRRDLVKVAARLAECGQDWLSADEFALSDSVYAEG EKSTSQARALSACKRMYGWLEETGQRADNPTRFLKAPKSERKLPTLITEAQIDALLAAPD VETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDLHRGSIRTIGKGDKLRLVPLGQEAA YWVERYCNESRPLLLKNKICDEVFVSQKRSGISRQLAWMIVKEYAEAAGIASLSPHGLRH AFATHLVNHGVDLRSVQMMLGHSDINTTQIYTHVANIRLKNMVDEHHSRS >gi|241321127|gb|ACQV01000008.1| GENE 41 43963 - 44406 602 147 aa, chain - ## HITS:1 COG:NMA0963 KEGG:ns NR:ns ## COG: NMA0963 COG1225 # Protein_GI_number: 15793920 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis Z2491 # 3 145 25 167 167 276 90.0 1e-74 MSKYQFTLPSSSGSDFNSAEHLPLVVYFYPKDSTPGCTTEGLDFNARLEQFKALGYTVVG ISRDGVKSHQNFCAKQGFQFELLSDKEETVCKLFDVIKLKKLYGKESLGIERSTFVLDEN GEIAHEWRKVKVAGHAQEVLDTISQAS >gi|241321127|gb|ACQV01000008.1| GENE 42 44443 - 45078 621 211 aa, chain - ## HITS:1 COG:RSc2629 KEGG:ns NR:ns ## COG: RSc2629 COG1428 # Protein_GI_number: 17547348 # Func_class: F Nucleotide transport and metabolism # Function: Deoxynucleoside kinases # Organism: Ralstonia solanacearum # 4 211 7 214 214 125 35.0 6e-29 MNPRYIVVEGAIGSGKTALSRRLAEHFSALLLSENPDHNPFLMKFYSNVSNNGLAAELFF LTRRAESVNIIDDQCAQGGMVVADFLPEKDRIFTPIVLNDDEQQLFADMKQRILPQYAEP DVVIYLQTAVENNRKRLQKRHEGIISLFPEGYLGRVHDEYSHFFHLYQSAPLLTVNADEL DLAGNDDHFQLLLRALEDFQGTRSYLNLSEK >gi|241321127|gb|ACQV01000008.1| GENE 43 45176 - 45664 187 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 6 137 122 252 278 76 40 3e-13 MYPHFAVIALGSNLANPAEQVRAALAELAAHPHIRLEKASSLYLTAPVGYDDQPDFVNAV CAVKTSLDGVALLAELNRIEAEFGRERTFRNAPRTLDLDIIDFDGIRSDDPHLTLPHPRA HERSFVMLPLAEILPDFELGEHGRAADLAQALGGQGIRLLKE >gi|241321127|gb|ACQV01000008.1| GENE 44 45680 - 46054 504 124 aa, chain - ## HITS:1 COG:NMB0746 KEGG:ns NR:ns ## COG: NMB0746 COG3094 # Protein_GI_number: 15676644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 124 1 124 124 171 84.0 3e-43 MQYLFVKYSHQIFVAITILLFNIRFFLLWRHPEKPLAGIWKAMPHLNDTMLLFTGLWLMK ITHFSPFNAPWLGMKILLLLVYIVLGMIMMRSRPRSPKFYIVYVLAMSCVATIVFLAKTK TLPF >gi|241321127|gb|ACQV01000008.1| GENE 45 46110 - 46679 697 189 aa, chain - ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 189 1 188 188 259 68.0 2e-69 MLLENILPFAHSLLRQALKAGGRALDATAGNGHDTLLLAQSVGETGRVWAFDVQSKALMQ TQGRLKENGVDGRVALIHGGHENLLSYIDEPLDAAVFNFGWLPGGDKSCTTEAASSIRAL TDTLGLLKEGGLAVAVLYPGHEAGRIEAEAIVQWAETLPQEAFAVLRYGFVNRRNAPPYL LAIEKLRQK >gi|241321127|gb|ACQV01000008.1| GENE 46 46758 - 47054 428 98 aa, chain - ## HITS:1 COG:NMA0961 KEGG:ns NR:ns ## COG: NMA0961 COG1923 # Protein_GI_number: 15793918 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Neisseria meningitidis Z2491 # 1 98 1 97 97 142 89.0 1e-34 MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA ISTIVPARAVSLQHENKQPQAAAAAAPVQVETAQQPAE >gi|241321127|gb|ACQV01000008.1| GENE 47 47353 - 48810 1910 485 aa, chain - ## HITS:1 COG:NMB0852 KEGG:ns NR:ns ## COG: NMB0852 COG1160 # Protein_GI_number: 15676748 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 485 1 485 485 912 98.0 0 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEPEKEEEEAKHPVFAV IGRPNVGKSTLVNAILGEERVIAFNMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVD EAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGIS EERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRV LQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFN LQGTPLRIQYNVSENPYENAEDKPKKKPLRRVSLSNRIEKREGRKEEKNRFKKKTKVSVK KQFSK >gi|241321127|gb|ACQV01000008.1| GENE 48 48952 - 49581 870 209 aa, chain - ## HITS:1 COG:NMA1064 KEGG:ns NR:ns ## COG: NMA1064 COG2976 # Protein_GI_number: 15794013 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 209 1 209 209 252 72.0 3e-67 MAAHLEEQQELDNFKYFWKSIGRWIFTLLIVASLGYLGYTIYQGQKASKDQEAAAVLAQM VEKAQQKTDQKAINADLAELQKNYPDSISTAQATLMVAATEFDAGRYDVAEGHLNWVLKN QNAPLVQALAAQRLGVTLLQQKKYDAAINALNTQVEADFEPLMLETKGDVYVAQNKTKEA VQSYEAALSKMPQTAVGRELLQMKIDSLK >gi|241321127|gb|ACQV01000008.1| GENE 49 49582 - 50877 1460 431 aa, chain - ## HITS:1 COG:NMA1065 KEGG:ns NR:ns ## COG: NMA1065 COG0124 # Protein_GI_number: 15794014 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 431 1 431 431 825 97.0 0 MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYGYQQIRTPIVEQTGLFV RSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMF RRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNRE ERAAHRAALVEYLIRYEAQLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEA SQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLI EELGGNPAPSIGFAMGIERLLLLVSEYGSLEVNAAPDVYAMHQGEGADLQVMKYAQALRA QGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMQGKHEQQTVAAAD LTDTLQQWKNA >gi|241321127|gb|ACQV01000008.1| GENE 50 51014 - 52111 404 365 aa, chain - ## HITS:1 COG:no KEGG:Suden_0538 NR:ns ## KEGG: Suden_0538 # Name: not_defined # Def: hypothetical protein # Organism: T.denitrificans_ATCC33889 # Pathway: not_defined # 1 365 1 368 370 319 48.0 1e-85 MLEAVEWGEFLIGDLFEFHTSKKRFDANKVQVLEAGQYPYVVRTALNNGIKGFIDESPEF LNDGNTISFGQDTATMFYQKKPYFTGDKIKIMKAKFRKFNGRNAQFILPVMSKAFSSFSW GSSSFKVSELKNVKCQLPVQNGNLHLDFMENFVAELEARRSAELEAYLSAAGLKDYTLTT EEVRALEAWETGQVNFVKFAFREIFDNIKQGRRLKKDDQKPGDIPFVMAGVTNTGVVNHI SNPVASFPENSITLDIFGNAFYRSYPYGAGDDTGVYWISENGLLKEAMLFLTAAMQKAVE GKFSYGKKLRSSQSLNIKMSLPSENGKPDYAYMQTLISAVQKQVIKDVVHYADEKIAATK TVTAR >gi|241321127|gb|ACQV01000008.1| GENE 51 52129 - 54207 2549 692 aa, chain - ## HITS:1 COG:jhp1365 KEGG:ns NR:ns ## COG: jhp1365 COG0286 # Protein_GI_number: 15612430 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Helicobacter pylori J99 # 16 681 5 672 678 801 63.0 0 MTQASKKSNKSNKSNKSIEPNIADLANGWLKSYKLDYRLEQASLNTEIDKALDDYYSKNG GIGGNRPDVKLLLQSSKNGRYYPVLIEYKGHKDKLEKLDADGNVENRNAKNEPIFKNING YAVNGAVHYANAVLHHTSYTDIIAVGMTGYKDEQGEIRYEIGVYYVSKSNLGVGQRVGDF NDFSFLAAEHFEDFISQVEELSLTPEELDRLKEKREKEIDASLTKLNNDIYQNEKGLGEN DRVYLVAAAIIATIGIPGKVAPLEKSDLKSSNERGWRDGDILVRKIESFLEEKALPKEKK EMILRTLSNTLLTENINKVHSGETQLKRVFTKIVDDLGIYYKIGLTTDFTGKLFNEMYSW LGFTQDKLNDVVLTPSYVATLLAKLARVNKDSYVWDFATGSAGLLVAAMNEMLIDAKNSI SSPEELRKKEAQIKAGQLLGLELLSNVYMLAILNMILMGDGSSNILNKDSLTDFDGKYGF GKTDHKFPADAFILNPPYSASGNGMNFVERALSMMEKGYAAIIIQNSAGSGKAREINRRI LQNNTLFASIKMPLDLFIGKSSVQTNIYVFKVGEPHEKDETVKFIDFSDDGYTRTNRKKA SNNLKDTGNARGRYEELVQLVRFGKKKLNIFSEKEYYEGTIDPKNGADWNQTAPIDTKPT LDDFKKTVSDYLAWEVSNLLKRGSGQNNTLGK >gi|241321127|gb|ACQV01000008.1| GENE 52 54550 - 55473 871 307 aa, chain + ## HITS:1 COG:NMA1085 KEGG:ns NR:ns ## COG: NMA1085 COG0564 # Protein_GI_number: 15794033 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis Z2491 # 1 307 1 307 307 510 84.0 1e-144 MKKRTNPLPLLDGVKPSYLVLPHEKQFYGLPLLHFLCVHFPFVGEENWRRRLNSGFVVGA DGVPFDENTLFEPGKTMFYYRETSRESEPRIPFEEKILHIDEHLIVVDKPHFLPVIPSGR FLRETLLTRLRLRSELQHLNVEDITPIHRLDKDTAGVMLLSLNPATRRDYQTMFQEKTVQ KTYEAVAPTRTDLDYPLDLSSRMERGEKFFLTRETEGEPNAHTTIELIENRGAFSLYRLT PHTGKKHQLRVHMMSLNMPLMNDALYPNPLAAGDEDYDRPLKLLAKRIEFTDPVSGEIRV FESGFTL >gi|241321127|gb|ACQV01000008.1| GENE 53 55542 - 56585 1570 347 aa, chain - ## HITS:1 COG:NMB0546 KEGG:ns NR:ns ## COG: NMB0546 COG1064 # Protein_GI_number: 15676452 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 347 1 347 348 615 94.0 1e-176 MKMHAVVVNKDVAGDVEVVERELRPLEYGEALVEVEYCGVCHTDLHVAAGDYGDKPGRVL GHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTGRETLCRSVLNAGYTADGG MATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGVRPGQWIAIYGAGGLGNL AVQYAKKVFGAHVVAIDVNDDKLAFAKETGADLIINAVKEDAAQVIQEKTGGAHVAVVTA VSAAAFNSGVNCVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRKDLEEAFQF GAEGLVVPKVELRALDEAPAIFQEMREGKITGRMVIDMNKECSCIHH >gi|241321127|gb|ACQV01000008.1| GENE 54 56927 - 58408 2320 493 aa, chain + ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 6 493 3 491 491 631 62.0 0 MAKDLNVFDKEYGLLINGEWTKGSEGKLLSSYNPANGDELAKFTDATDADVDAAVAAAQE AFKTWRKTTTAERAAILNKIADVIDENAELFALQETLDNGKPIRETRAADVPLASDHFRY FASVIRGEEGTATQLDAEDLSIVLREPIGVVGQIIPWNFPFLMAAWKIAPALAAGCTIVI HPSSSTSLSLLSLAQKINHLLPKGVLNVITGRGSKSGEYMLHHKGFNKLAFTGSTEVGRR VGIAAAELLIPSTLELGGKSANIFFDDMPFDKALEGAQKGILFNQGQVCCAGSRIFVQEG IYDKFVNALAEEFEKIKVGLPWEDDTQMGSQVNAGQLETILKYVKIGEQEGCRIITGGKK IEGELGKGEFVEPTLIEASSNEARVAQEEIFGPVATVIKFKTEEEVIKMANDSEYGLGGA VWSTDINRCLRVSNALETGRVWVNCYNRLPAGAPFGGYKTSGIGRETHKMMLAAYTQVKN IYISTREEREGFY >gi|241321127|gb|ACQV01000008.1| GENE 55 58504 - 59439 1597 311 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241758620|ref|ZP_04756734.1| 50S ribosomal protein L27 [Neisseria flavescens SK114] # 1 311 1 311 311 619 100 1e-176 MKKQKPWLGFSLALLATMTWGSLPVIAQQALKAVDAPTLVWVRFLVASLVLFAVLGLTGK LPRPSEFSKQTLFLLVLGIIGISANFVLVAMGLHYISPTTTQVLWQLSPFTMILVGVGVF KEAFTHRQKIGLMLLLTGLAMFFNDKFGELFSLGSYAVGVMMAASGSMIWVCYGVAQKLL SKHFNSQQILLMIYFCSSFVFLPFAEPSQIVHIGNPFLWGCFIYCCLNTLIGYGSFGEAL NHWDASKVSIVTTLIPVFTMIFSTIGHHLAPDYFAASDMNIVSYVGAMVVVAGALLAVAG EKVMGLFLRKI >gi|241321127|gb|ACQV01000008.1| GENE 56 59458 - 61158 2251 566 aa, chain - ## HITS:1 COG:NMA1052 KEGG:ns NR:ns ## COG: NMA1052 COG0608 # Protein_GI_number: 15794002 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Neisseria meningitidis Z2491 # 1 565 1 565 566 1107 95.0 0 MSVKIQTRSINPTVFNDLLTAGTDPLIARLCAARDVQSPAELDDKLAALLPYQTLTNCEA AAGRLADAIERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE LAEIAAEQGVDLLVTVDNGIASIAGVARAQELGLDVIVTDHHLPAETVPDCIIVNPNQKG CGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEPNLGDLLDLVALGTVADVVTLDH NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV GIACLLARDDVEAQELAAQLNNLNIERREIEQSMLQDALNDFPETLPSGQTTLVAYRDDF HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLPARDITLEQAQNL ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR TVYRPVANEWRNNLELQLYIDYWEAT >gi|241321127|gb|ACQV01000008.1| GENE 57 61262 - 61795 785 177 aa, chain - ## HITS:1 COG:NMA1049 KEGG:ns NR:ns ## COG: NMA1049 COG3028 # Protein_GI_number: 15794000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 163 22 184 191 266 88.0 2e-71 MFEQEDEWVSKTQMKKQMNDLQALGMELTKLSSDTLKKIGLDEELFEAIVTYKKITSNSA LKRQAQFIGRLMRDTDPAPIEAYLAKLRGDNTAHNAFLQRVEQARTRLLADDGAITQFMA DFPQADAGKLRTLIRNTKKEQEQNKPPKNFRALFQEIKAVMEAGQSDVSEEGQDWEE >gi|241321127|gb|ACQV01000008.1| GENE 58 61920 - 63251 1931 443 aa, chain + ## HITS:1 COG:NMB0839 KEGG:ns NR:ns ## COG: NMB0839 COG0312 # Protein_GI_number: 15676735 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis MC58 # 1 443 1 443 443 758 85.0 0 MLFNHTPDELLRLCGHTLDLAKQSGATAAEADFSESLGQSVSVRLGEIEQIEFQQDKSLD ITVYVGQRKGRASTADFSERALQDMVKAAIDIARYTAEDDCAGLADAALMATHIGDLDRY HEWDLSTESAIDLAKQCEQAALSTDERIENSEGASVHTGHYQYVYGNTHGFSAHQQSTHH SISCNVVASDEHGMQRDYWYDSSCRHEDMDTPELIGKTAAERTLRRLNSRSVPTGSYPVL FDTTVAVGLIGHLIGALSGGALYRQSSFLIDSIGKQVLPEFLSLREEPHILRSFRSTYFD AEGVATQPRFVVKDGIIEGYFLSSYSAKKLGMQTTGNAGGAHNLYLNHTHATQADLLKEM GTGLLVTELMGQGVNGITGDYSRGAAGFWVENGVIAYPVQEITIAGRLQDMYRDIIGVAD DALRRSSNQIGSILVSNMTVAGN >gi|241321127|gb|ACQV01000008.1| GENE 59 63339 - 64508 1510 389 aa, chain + ## HITS:1 COG:NMA1057 KEGG:ns NR:ns ## COG: NMA1057 COG0438 # Protein_GI_number: 15794006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 192 387 6 202 230 248 62.0 1e-65 MHIVVIPSWYPSSETDVDGIFFRLQAQALQREGMKIGMVVPMFRYLRSQPKTIFSRFYGL RRHQQGGLNTYAYDSMYFFPRCPVVDIDRIRWVNAGMKAFEAYIADNGKPDVIHAHCVNY AGILACAIFKKYGIPYVITEHSSAISRGLVRKNQWPSMHEAVRHSAARFAVSRDFCRILE KTYAGTDWQYLPNMLGGNFEQDFEFPEKNNQDFTFCSVSHLRHLKGHDLLLPAFAEALKT HPQLKLKIGGGGAEEGRLKQLASDLGINHAVTFTGALTTDQTLDLMRHSNAFVLASRTET FGVVYIEALSQGLPVIATRCGGPESIVTSDNGLLVPIENIPELTKALLTLYENHANYDPV RLRQDCLQQFGSRAIAQHLINTFQKVLNK >gi|241321127|gb|ACQV01000008.1| GENE 60 64663 - 65172 548 169 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758644|ref|ZP_04756758.1| ## NR: gi|241758644|ref|ZP_04756758.1| cold-shock DNA-binding domain protein [Neisseria flavescens SK114] # 1 169 1 169 169 348 100.0 8e-95 MRYYGTITRWNSKRGFGAATIEDTGQEIFLALAAFTTLTRLPAEGQHISFNITEGRRGRK EAENVCFALDCADCFDVLVPPPEKPLAGKQAIIGLIAVIFVCSIFAALWYGLHFSDNTPE EPAIKKQETMVHEVAAKIEAERKAWRDAVNGNNRRSGQPQRAKDNTSKQ >gi|241321127|gb|ACQV01000008.1| GENE 61 65266 - 68751 4250 1161 aa, chain - ## HITS:1 COG:NMB0545 KEGG:ns NR:ns ## COG: NMB0545 COG1196 # Protein_GI_number: 15676451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Neisseria meningitidis MC58 # 1 1159 1 1159 1161 1668 97.0 0 MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES MQDVIFNGAATRRPAPRASVELVFDNSNHSLQGAWGQYAEVSIKRQLTRQGESTYFINNQ TVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEELRAYIEEAAGVSKYKERRKET EGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQS LAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQI ARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAEEKQTELAEWA MQVAEHEERLPELEEAQATLNAAFQTQQDEANRIRRELALKQQQLAHAEQTVAKHEERKG RLKQENQTLNLPDEAETAAAQEAAVLLQSQQEHYEEQIIAAEEVLHAAREAFQTTLSRFQ SLKQQHITLQAQQQALSQILSQQQEAADFWQATDRAAAPQLWQHINAPVEWQHALSVILA ERLHARAVPHGFVPPAPLPQGQAAWLPDDLSGGIKKSLPVQALLNQIQAQPPFQTALHHW LDGVLCAPDLSYALAHQSDLGAHQIWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGI ASELEKLAPELSAAESAFKQAEAAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLART NQGQIRREHIERELAQLAEEQTVLQHTSDGLSDDIVTLQEAASELEHQQQTTAHSRQEQQ GRLKQAQLALLEANRQYGLAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELALAYE TEFQNDEQHIKLDELTEAVHTLDEEYIAVQEKLAQIQEQGREQYARVQTLQTKLPQLQAA TQTALLQQQEALINAKRYHQNLTERAADLDALEALAKESPKVLNTSIGSLSQQIEALGAV NLAALQELEEARERDGYYRSQSEDVQAAITLLEEAIAQIDDKTKARFKETFDAVNGKVQT FFPTLFGGGEATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFS LNPAPFCLLDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQE KGVSRVVAVDIKQALEMAEPN >gi|241321127|gb|ACQV01000008.1| GENE 62 69129 - 71882 2077 917 aa, chain - ## HITS:1 COG:no KEGG:Dvul_2968 NR:ns ## KEGG: Dvul_2968 # Name: not_defined # Def: outer membrane autotransporter # Organism: D.vulgaris_DP4 # Pathway: not_defined # 411 888 238 687 721 129 26.0 7e-28 MRIKKTSSIMTKNNNHQLSTALTTLTCMLAGMFPIYTQAASIYGCDRSFFSNENADGCSV SVGLGQKVDGSAIGGSAEKGSANKNRVNIAHRAHVSGVVRGGVSTRKEANHNEVVIGNNV QIGTEKDNGFVLGGSSRESSAIFNAVRIGANAIINGFVEGGSASGVKTDEAGRKNIEIDS SSNSVHIGDNSVVTGSVSGGSDGMLSSFNEVYIGNNVRVGPKLSDEELVRGGIVTGGSAG HQTNYVPVVTNSNVVNIGDDFYAGQVLGGSSGKESSVIPENTENENRVTIGDRSRIFKVA AGDGTDKATVNKNELRIGKDANINVIFGGSAWNGSNVSENLVTIGANLTADMVTGGQAGW ESEANNNTVMLGRNATVRDKLVGGVAVTRANGNKVLLNRDFKIANLSGGGATEEANNNIV TLLGRGEVSGVLYGGVSSNKSAGNTLNLGNINEPIEMNSISAGKVGYFNTYNFYLPNNTR NQDIALKLLGIEGDFDSVIDLGNATVNSYVPGDTALKAGDIVHLIQVDPTREIAWKGQGK VYQGVTLTHDLADIRVDDQSKNLDLVFQKNNIKDSINVPANNNGSVNNTGTGNKNNASNN TDTTMPSANVNPKTKSLLQGRLVAPALINGGSAYLLEGGLESFYQNTNVDKNKANIGSNG FANVRADNREVTTGSHVKLKGMTFDAGYAWNKPLGLGNLTYGIAAEYGYTRYTSHLDDGT RGKGKAWYLGANTFGNYLWNNGLYIQGSLRIGRVSGDYRSNDFVHANGNQVNYDSKSNYI AGHIGAGKIWQLGSLNSLDTYIKYFDSHTSSDKAKLNSGETYHFSSVRSQRGRIGVQYNH QLAKTKLHFGLAHEREWNGHVRAQYQGLSLPSPTMKGGTTLGEAGVNYQLGGKQLNTALQ VYGGRQRGAGLHLGVKF >gi|241321127|gb|ACQV01000008.1| GENE 63 72335 - 72682 221 115 aa, chain - ## HITS:1 COG:NMB0545 KEGG:ns NR:ns ## COG: NMB0545 COG1196 # Protein_GI_number: 15676451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Neisseria meningitidis MC58 # 1 114 12 125 1161 228 99.0 2e-60 KSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGESMQDVIFNGAAT RRPAPRASVELVFDNSDHSLQGAWGQYAEVSIKRQLTRQGESTYFINNQTVRCRV Prediction of potential genes in microbial genomes Time: Thu May 26 11:22:18 2011 Seq name: gi|241320893|gb|ACQV01000009.1| Neisseria flavescens SK114 ctg1118407793869, whole genome shotgun sequence Length of sequence - 210793 bp Number of predicted genes - 204, with homology - 201 Number of transcription units - 111, operones - 59 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 9 - 49 7.3 1 1 Op 1 . - CDS 151 - 1125 1543 ## COG0158 Fructose-1,6-bisphosphatase 2 1 Op 2 . - CDS 1193 - 1546 408 ## gi|241758870|ref|ZP_04756983.1| putative lipoprotein - Prom 1570 - 1629 7.8 3 2 Tu 1 . - CDS 1676 - 2521 1170 ## COG2961 Protein involved in catabolism of external DNA - Prom 2541 - 2600 5.6 + Prom 2472 - 2531 3.5 4 3 Op 1 . + CDS 2647 - 3261 884 ## COG0307 Riboflavin synthase alpha chain 5 3 Op 2 . + CDS 3278 - 4144 959 ## COG2607 Predicted ATPase (AAA+ superfamily) + Term 4155 - 4203 11.4 - Term 4143 - 4191 11.4 6 4 Tu 1 . - CDS 4210 - 4638 571 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 4719 - 4778 6.8 7 5 Tu 1 . - CDS 4823 - 5017 120 ## - Prom 5226 - 5285 2.6 + Prom 4771 - 4830 6.5 8 6 Tu 1 . + CDS 4916 - 5596 1068 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 5649 - 5699 12.0 - Term 5642 - 5681 10.0 9 7 Tu 1 . - CDS 5702 - 7084 2347 ## COG1109 Phosphomannomutase - Prom 7116 - 7175 5.0 - Term 7122 - 7169 14.3 10 8 Tu 1 . - CDS 7206 - 8048 1141 ## COG2321 Predicted metalloprotease - Prom 8074 - 8133 2.9 + Prom 8154 - 8213 3.7 11 9 Tu 1 . + CDS 8235 - 8732 564 ## COG1881 Phospholipid-binding protein + Term 8756 - 8798 8.4 - Term 8744 - 8786 8.4 12 10 Tu 1 . - CDS 8809 - 9318 914 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 9353 - 9412 1.9 - Term 9368 - 9422 19.6 13 11 Op 1 . - CDS 9437 - 10852 2126 ## COG0471 Di- and tricarboxylate transporters - Prom 10914 - 10973 7.4 - Term 10974 - 11017 10.0 14 11 Op 2 . - CDS 11127 - 12290 1283 ## COG2814 Arabinose efflux permease - Prom 12333 - 12392 3.9 + Prom 12344 - 12403 5.0 15 12 Op 1 15/0.000 + CDS 12436 - 12645 396 ## COG2608 Copper chaperone + Term 12667 - 12706 9.1 + Prom 12692 - 12751 5.7 16 12 Op 2 . + CDS 12792 - 14987 2830 ## COG2217 Cation transport ATPase + Term 14991 - 15051 4.2 + Prom 14989 - 15048 1.7 17 13 Tu 1 . + CDS 15075 - 15299 267 ## gi|241758764|ref|ZP_04756877.1| hypothetical protein NEIFL0001_0852 + Term 15370 - 15431 2.2 + Prom 15342 - 15401 5.4 18 14 Op 1 . + CDS 15455 - 16021 603 ## Psta_2515 lipolytic protein G-D-S-L family 19 14 Op 2 . + CDS 16143 - 16391 496 ## gi|241758895|ref|ZP_04757008.1| conserved hypothetical protein + Term 16403 - 16450 12.1 - Term 16396 - 16434 10.2 20 15 Op 1 13/0.000 - CDS 16455 - 17483 1605 ## COG0547 Anthranilate phosphoribosyltransferase - Term 17518 - 17554 -1.0 21 15 Op 2 . - CDS 17572 - 18162 873 ## COG0512 Anthranilate/para-aminobenzoate synthases component II - Prom 18228 - 18287 3.5 + Prom 18187 - 18246 5.8 22 16 Op 1 . + CDS 18338 - 19879 2115 ## COG5339 Uncharacterized protein conserved in bacteria 23 16 Op 2 2/0.194 + CDS 19958 - 20341 757 ## COG0853 Aspartate 1-decarboxylase + Term 20354 - 20391 8.7 24 16 Op 3 . + CDS 20416 - 21258 1147 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 21275 - 21314 10.0 - Term 21263 - 21302 10.0 25 17 Op 1 . - CDS 21315 - 23291 2009 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 26 17 Op 2 2/0.194 - CDS 23328 - 23810 668 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 23819 - 23869 13.7 27 18 Op 1 . - CDS 23883 - 25019 1079 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 28 18 Op 2 . - CDS 25103 - 25672 705 ## COG1859 RNA:NAD 2'-phosphotransferase 29 18 Op 3 . - CDS 25716 - 27191 2134 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 27235 - 27294 5.4 - Term 27286 - 27319 4.1 30 19 Tu 1 . - CDS 27327 - 27704 515 ## NMC1014 hypothetical protein - Prom 27815 - 27874 3.9 + Prom 27756 - 27815 6.2 31 20 Tu 1 . + CDS 27841 - 28461 596 ## COG2840 Uncharacterized protein conserved in bacteria + Term 28464 - 28517 9.5 - Term 28452 - 28503 5.3 32 21 Op 1 2/0.194 - CDS 28515 - 29003 576 ## COG4969 Tfp pilus assembly protein, major pilin PilA 33 21 Op 2 5/0.028 - CDS 29008 - 29553 447 ## COG4726 Tfp pilus assembly protein PilX 34 21 Op 3 5/0.028 - CDS 29532 - 30467 846 ## COG4966 Tfp pilus assembly protein PilW 35 21 Op 4 5/0.028 - CDS 30470 - 31117 574 ## COG4967 Tfp pilus assembly protein PilV 36 21 Op 5 2/0.194 - CDS 31133 - 31831 600 ## COG4970 Tfp pilus assembly protein FimT - Prom 31912 - 31971 7.2 37 22 Tu 1 . - CDS 31988 - 33394 1814 ## COG0305 Replicative DNA helicase - Prom 33471 - 33530 3.8 + Prom 33468 - 33527 4.8 38 23 Tu 1 . + CDS 33549 - 34130 469 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 34139 - 34196 17.5 + Prom 34264 - 34323 4.6 39 24 Tu 1 . + CDS 34356 - 35897 1465 ## COG0477 Permeases of the major facilitator superfamily + Term 35913 - 35950 9.1 - Term 35896 - 35944 10.2 40 25 Op 1 . - CDS 35956 - 36801 700 ## COG3739 Uncharacterized integral membrane protein 41 25 Op 2 . - CDS 36835 - 38100 1455 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 42 25 Op 3 . - CDS 38102 - 38986 995 ## Daro_2986 hypothetical protein 43 25 Op 4 8/0.028 - CDS 38987 - 39742 611 ## COG3063 Tfp pilus assembly protein PilF 44 25 Op 5 11/0.028 - CDS 39751 - 40839 1315 ## COG0820 Predicted Fe-S-cluster redox enzyme - Prom 40860 - 40919 2.2 - Term 40940 - 40987 7.4 45 26 Op 1 2/0.194 - CDS 41008 - 41433 661 ## COG0105 Nucleoside diphosphate kinase 46 26 Op 2 . - CDS 41528 - 42664 924 ## COG1485 Predicted ATPase - Prom 42761 - 42820 4.3 - Term 42872 - 42917 8.3 47 27 Op 1 16/0.000 - CDS 42925 - 43221 466 ## COG0776 Bacterial nucleoid DNA-binding protein 48 27 Op 2 21/0.000 - CDS 43250 - 44929 2800 ## PROTEIN SUPPORTED gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 49 27 Op 3 . - CDS 45090 - 45749 1069 ## COG0283 Cytidylate kinase - Prom 45783 - 45842 4.8 + Prom 45825 - 45884 4.0 50 28 Tu 1 . + CDS 45966 - 46997 1397 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 47002 - 47051 6.0 + Prom 47037 - 47096 8.6 51 29 Op 1 . + CDS 47120 - 49027 2578 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 49033 - 49074 -0.2 52 29 Op 2 9/0.028 + CDS 49118 - 49549 623 ## COG2867 Oligoketide cyclase/lipid transport protein 53 29 Op 3 2/0.194 + CDS 49542 - 49814 362 ## COG2914 Uncharacterized protein conserved in bacteria 54 29 Op 4 . + CDS 49869 - 50447 720 ## COG0193 Peptidyl-tRNA hydrolase 55 30 Op 1 . + CDS 50551 - 50760 295 ## NGK_0536 putative ring dioxygenase beta subunit 56 30 Op 2 . + CDS 50757 - 51125 292 ## NMB0794 hypothetical protein + Term 51146 - 51197 13.1 - Term 51134 - 51183 14.3 57 31 Op 1 . - CDS 51404 - 52579 1294 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 52613 - 52672 3.6 58 31 Op 2 . - CDS 52676 - 53038 82 ## COG0526 Thiol-disulfide isomerase and thioredoxins 59 31 Op 3 . - CDS 53098 - 53607 581 ## gi|241758878|ref|ZP_04756991.1| hypothetical protein NEIFL0001_0900 60 31 Op 4 . - CDS 53682 - 54275 463 ## PROTEIN SUPPORTED gi|71274727|ref|ZP_00651015.1| Ham1-like protein 61 31 Op 5 . - CDS 54285 - 54515 404 ## NGO0222 hypothetical protein - Prom 54539 - 54598 6.1 - Term 54582 - 54619 9.1 62 32 Op 1 9/0.028 - CDS 54637 - 55767 1623 ## COG3317 Uncharacterized lipoprotein 63 32 Op 2 . - CDS 55849 - 56724 1217 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 56761 - 56820 5.5 + Prom 56964 - 57023 7.2 64 33 Tu 1 . + CDS 57061 - 58452 309 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 58464 - 58511 14.1 + Prom 58460 - 58519 8.2 65 34 Tu 1 . + CDS 58569 - 59711 1375 ## COG0116 Predicted N6-adenine-specific DNA methylase + Term 59723 - 59767 11.5 + Prom 59869 - 59928 9.9 66 35 Op 1 . + CDS 59999 - 60508 377 ## DNO_0911 anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) 67 35 Op 2 . + CDS 60626 - 62407 2253 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 62437 - 62482 12.2 + Prom 62505 - 62564 8.6 68 36 Tu 1 . + CDS 62600 - 62989 747 ## gi|241758848|ref|ZP_04756961.1| putative lipoprotein + Term 63012 - 63047 6.0 - Term 63159 - 63197 7.5 69 37 Tu 1 . - CDS 63283 - 63813 416 ## COG1943 Transposase and inactivated derivatives - Prom 63929 - 63988 2.1 - Term 63941 - 63981 0.5 70 38 Op 1 . - CDS 64014 - 65006 419 ## Dtox_3921 hypothetical protein 71 38 Op 2 . - CDS 65023 - 65538 108 ## Dtox_3922 hypothetical protein - Prom 65719 - 65778 5.4 72 39 Tu 1 . - CDS 66382 - 69228 3860 ## COG0178 Excinuclease ATPase subunit - Prom 69258 - 69317 6.9 - Term 69316 - 69357 11.3 73 40 Tu 1 . - CDS 69380 - 70243 1011 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 70408 - 70467 4.7 74 41 Tu 1 . + CDS 70688 - 72073 1482 ## COG2931 RTX toxins and related Ca2+-binding proteins + Term 72107 - 72155 13.0 + Prom 72138 - 72197 7.0 75 42 Tu 1 . + CDS 72226 - 73089 1401 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 73101 - 73150 12.2 + Prom 73130 - 73189 6.6 76 43 Tu 1 . + CDS 73326 - 75446 1964 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 75468 - 75514 16.1 + Prom 75516 - 75575 5.7 77 44 Tu 1 . + CDS 75612 - 77303 2083 ## COG0277 FAD/FMN-containing dehydrogenases + Term 77322 - 77359 9.1 - Term 77309 - 77346 9.1 78 45 Tu 1 . - CDS 77365 - 78729 1932 ## COG0733 Na+-dependent transporters of the SNF family - Prom 78757 - 78816 9.3 - Term 79267 - 79310 6.2 79 46 Tu 1 . - CDS 79514 - 80197 958 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 80262 - 80321 2.2 - Term 80274 - 80312 7.1 80 47 Tu 1 . - CDS 80344 - 80820 278 ## COG3467 Predicted flavin-nucleotide-binding protein - Prom 80864 - 80923 6.6 + Prom 80866 - 80925 8.5 81 48 Op 1 2/0.194 + CDS 81162 - 81899 884 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 82 48 Op 2 19/0.000 + CDS 81896 - 82582 265 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 83 48 Op 3 2/0.194 + CDS 82615 - 83094 678 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 84 48 Op 4 2/0.194 + CDS 83138 - 83809 1112 ## COG0120 Ribose 5-phosphate isomerase + Prom 83830 - 83889 3.8 85 49 Tu 1 . + CDS 83910 - 84626 715 ## COG1525 Micrococcal nuclease (thermonuclease) homologs + Term 84640 - 84677 8.7 - TRNA 84806 - 84896 68.8 # Ser GGA 0 0 - TRNA 84958 - 85044 70.5 # Leu CAG 0 0 - TRNA 85083 - 85169 71.6 # Leu CAG 0 0 + Prom 85147 - 85206 3.2 86 50 Tu 1 . + CDS 85249 - 87744 1140 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Term 87753 - 87806 18.1 87 51 Tu 1 2/0.194 + CDS 87827 - 88174 352 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 88268 - 88315 3.1 + Prom 88215 - 88274 2.6 88 52 Op 1 2/0.194 + CDS 88320 - 90173 2183 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 90184 - 90235 9.0 89 52 Op 2 . + CDS 90256 - 90861 642 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 90877 - 90915 10.2 - Term 90851 - 90917 19.0 90 53 Op 1 . - CDS 90924 - 91211 446 ## NGK_1110 putative periplasmic protein 91 53 Op 2 . - CDS 91300 - 91419 67 ## - Prom 91479 - 91538 2.0 + Prom 91338 - 91397 3.6 92 54 Op 1 23/0.000 + CDS 91426 - 92676 1491 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 93 54 Op 2 2/0.194 + CDS 92669 - 93352 230 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 + Term 93398 - 93465 21.8 + Prom 93361 - 93420 2.9 94 55 Op 1 . + CDS 93484 - 95247 1304 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Prom 95257 - 95316 5.9 95 55 Op 2 . + CDS 95344 - 96543 1526 ## gi|241758892|ref|ZP_04757005.1| hypothetical protein NEIFL0001_0943 + Term 96554 - 96599 7.3 - Term 96550 - 96581 4.1 96 56 Tu 1 . - CDS 96639 - 97013 302 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 97160 - 97219 3.8 + Prom 97028 - 97087 4.4 97 57 Op 1 3/0.028 + CDS 97245 - 98204 1440 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 98212 - 98265 9.3 + Prom 98210 - 98269 3.4 98 57 Op 2 . + CDS 98293 - 99618 243 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Prom 99631 - 99690 9.7 99 58 Op 1 . + CDS 99838 - 100437 299 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 100 58 Op 2 . + CDS 100443 - 100991 634 ## gi|241758888|ref|ZP_04757001.1| putative anti-RNA polymerase sigma factor SigE + Term 101003 - 101048 3.6 + Prom 100994 - 101053 5.5 101 59 Op 1 . + CDS 101109 - 101891 184 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 102 59 Op 2 . + CDS 101935 - 102594 889 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 102610 - 102652 9.4 - Term 102598 - 102640 9.4 103 60 Tu 1 . - CDS 102656 - 103144 946 ## COG2839 Uncharacterized protein conserved in bacteria - Prom 103227 - 103286 2.6 - Term 103235 - 103290 17.5 104 61 Op 1 . - CDS 103304 - 104263 1410 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 104299 - 104358 4.5 105 61 Op 2 . - CDS 104392 - 104745 553 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 104730 - 104789 4.3 106 62 Op 1 2/0.194 + CDS 104845 - 105330 462 ## COG2606 Uncharacterized conserved protein 107 62 Op 2 . + CDS 105346 - 105933 926 ## COG3671 Predicted membrane protein 108 62 Op 3 . + CDS 105937 - 106809 728 ## NMA1460 putative integral membrane protein + Term 106820 - 106855 5.1 + Prom 106814 - 106873 4.0 109 63 Op 1 . + CDS 106970 - 107680 1044 ## plu0311 hypothetical protein 110 63 Op 2 . + CDS 107713 - 108714 1134 ## COG0113 Delta-aminolevulinic acid dehydratase + Term 108730 - 108785 9.2 - Term 108847 - 108906 15.9 111 64 Op 1 13/0.000 - CDS 108918 - 109901 1259 ## COG0320 Lipoate synthase 112 64 Op 2 6/0.028 - CDS 110031 - 110633 853 ## COG0321 Lipoate-protein ligase B 113 64 Op 3 . - CDS 110633 - 110908 453 ## COG2921 Uncharacterized conserved protein - Prom 111070 - 111129 5.4 + Prom 110864 - 110923 4.9 114 65 Op 1 16/0.000 + CDS 111122 - 113581 3334 ## COG0466 ATP-dependent Lon protease, bacterial type + Term 113717 - 113743 -1.0 + Prom 113635 - 113694 5.7 115 65 Op 2 . + CDS 113767 - 114036 581 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 114093 - 114139 13.2 116 66 Op 1 . + CDS 114383 - 114652 239 ## Asuc_1013 FeoA family protein 117 66 Op 2 . + CDS 114680 - 116548 2355 ## COG0370 Fe2+ transport system protein B 118 66 Op 3 . + CDS 116545 - 116673 170 ## + Term 116693 - 116743 16.2 - Term 116687 - 116725 10.2 119 67 Op 1 . - CDS 116864 - 117397 -227 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 117418 - 117477 4.2 120 67 Op 2 . - CDS 117623 - 118276 720 ## COG3738 Uncharacterized protein conserved in bacteria - Prom 118480 - 118539 7.0 + Prom 118535 - 118594 4.6 121 68 Op 1 13/0.000 + CDS 118732 - 119739 692 ## COG0826 Collagenase and related proteases 122 68 Op 2 5/0.028 + CDS 119753 - 120670 1363 ## COG0826 Collagenase and related proteases 123 68 Op 3 . + CDS 120657 - 121097 455 ## COG3154 Putative lipid carrier protein + Term 121183 - 121240 16.1 - Term 121281 - 121333 17.2 124 69 Tu 1 . - CDS 121360 - 122736 1665 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 122773 - 122832 5.1 + Prom 122826 - 122885 2.4 125 70 Op 1 . + CDS 122906 - 123280 189 ## gi|298368985|ref|ZP_06980303.1| glycine betaine transporter 126 70 Op 2 . + CDS 123114 - 123437 426 ## COG1292 Choline-glycine betaine transporter 127 71 Op 1 . - CDS 123408 - 124526 815 ## COG4292 Predicted membrane protein 128 71 Op 2 . - CDS 124601 - 125287 805 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 129 72 Tu 1 . + CDS 125300 - 125527 184 ## gi|241758862|ref|ZP_04756975.1| putative acyltransferase + Term 125582 - 125627 7.4 - Term 125687 - 125755 9.5 130 73 Tu 1 . - CDS 125783 - 126121 570 ## COG0347 Nitrogen regulatory protein PII - Prom 126149 - 126208 3.3 - Term 126134 - 126170 8.9 131 74 Op 1 30/0.000 - CDS 126211 - 127995 679 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 132 74 Op 2 13/0.000 - CDS 128074 - 129672 2624 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 133 74 Op 3 . - CDS 129817 - 132480 3587 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component - Prom 132548 - 132607 4.2 134 75 Tu 1 . - CDS 133101 - 134528 1547 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 134598 - 134657 3.9 - Term 134658 - 134697 2.0 135 76 Tu 1 . - CDS 134753 - 135040 214 ## PROTEIN SUPPORTED gi|56478165|ref|YP_159754.1| RNA-binding protein - Prom 135118 - 135177 4.6 + Prom 135018 - 135077 4.5 136 77 Op 1 13/0.000 + CDS 135152 - 135772 336 ## COG0293 23S rRNA methylase 137 77 Op 2 . + CDS 135843 - 137804 1565 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 137816 - 137857 9.0 - Term 137851 - 137890 9.1 138 78 Op 1 . - CDS 137908 - 138402 649 ## COG2077 Peroxiredoxin 139 78 Op 2 . - CDS 138446 - 138985 720 ## NMB1470 hypothetical protein - Prom 139005 - 139064 2.5 140 78 Op 3 . - CDS 139066 - 140076 1401 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 140197 - 140256 10.3 + Prom 140193 - 140252 9.4 141 79 Op 1 . + CDS 140335 - 141168 423 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 142 79 Op 2 . + CDS 141134 - 142909 1254 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 142936 - 142985 9.6 + Prom 142954 - 143013 5.1 143 80 Tu 1 . + CDS 143142 - 145130 1568 ## COG4389 Site-specific recombinase + Term 145142 - 145186 8.1 - Term 145128 - 145172 8.1 144 81 Op 1 29/0.000 - CDS 145196 - 145816 896 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Term 145831 - 145871 7.5 145 81 Op 2 2/0.194 - CDS 145906 - 147216 1979 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 147307 - 147366 5.4 - Term 147332 - 147389 13.8 146 82 Tu 1 . - CDS 147409 - 149853 2934 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 149895 - 149954 5.8 147 83 Op 1 . - CDS 150042 - 150593 470 ## NMB1225 hypothetical protein 148 83 Op 2 . - CDS 150630 - 150983 351 ## gi|241758874|ref|ZP_04756987.1| putative lipoprotein 149 83 Op 3 . - CDS 151031 - 152950 2480 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 152997 - 153056 6.6 - Term 153001 - 153073 10.3 150 84 Op 1 34/0.000 - CDS 153122 - 153889 677 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 151 84 Op 2 31/0.000 - CDS 153899 - 154615 956 ## COG0765 ABC-type amino acid transport system, permease component 152 84 Op 3 . - CDS 154605 - 155429 1528 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 155471 - 155530 6.2 - Term 155515 - 155558 9.9 153 85 Tu 1 . - CDS 155584 - 157494 2786 ## COG0366 Glycosidases + Prom 158061 - 158120 6.0 154 86 Op 1 5/0.028 + CDS 158162 - 158941 798 ## COG0247 Fe-S oxidoreductase 155 86 Op 2 13/0.000 + CDS 158938 - 159639 771 ## COG1556 Uncharacterized conserved protein 156 86 Op 3 . + CDS 159636 - 161087 1604 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain + Term 161093 - 161148 10.4 - Term 161206 - 161244 10.2 157 87 Tu 1 . - CDS 161277 - 165110 4741 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 165136 - 165195 4.7 - Term 165519 - 165562 10.0 158 88 Tu 1 . - CDS 165585 - 166802 797 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 166827 - 166886 8.5 - Term 166864 - 166918 12.1 159 89 Op 1 . - CDS 166970 - 167281 417 ## NMA1411 hypothetical protein 160 89 Op 2 . - CDS 167364 - 168626 1680 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 168638 - 168686 12.1 161 90 Op 1 . - CDS 168702 - 169664 1573 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 162 90 Op 2 . - CDS 169674 - 170099 469 ## NMC1115 hypothetical protein - Prom 170129 - 170188 5.9 + Prom 169996 - 170055 3.4 163 91 Tu 1 . + CDS 170225 - 170884 461 ## COG0692 Uracil DNA glycosylase + Term 170896 - 170937 10.4 - Term 170884 - 170925 9.6 164 92 Op 1 17/0.000 - CDS 170939 - 172012 1611 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 165 92 Op 2 17/0.000 - CDS 172009 - 172869 1283 ## COG4208 ABC-type sulfate transport system, permease component 166 92 Op 3 . - CDS 172954 - 173790 954 ## COG0555 ABC-type sulfate transport system, permease component - Prom 173815 - 173874 4.7 - Term 173891 - 173932 9.1 167 93 Op 1 . - CDS 173951 - 174400 641 ## gi|241758716|ref|ZP_04756829.1| conserved hypothetical protein 168 93 Op 2 . - CDS 174413 - 174607 210 ## gi|225076062|ref|ZP_03719261.1| hypothetical protein NEIFLAOT_01094 - Prom 174750 - 174809 6.0 + Prom 174697 - 174756 3.9 169 94 Tu 1 . + CDS 174793 - 176421 2615 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 176454 - 176499 11.5 - Term 176577 - 176622 10.1 170 95 Tu 1 . - CDS 176646 - 177860 1638 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 177933 - 177992 5.2 + Prom 177953 - 178012 3.8 171 96 Tu 1 . + CDS 178068 - 179591 1557 ## COG1171 Threonine dehydratase + Term 179596 - 179653 15.2 - Term 179592 - 179631 9.1 172 97 Tu 1 . - CDS 179651 - 180367 939 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 180438 - 180497 6.6 - Term 180389 - 180425 4.0 173 98 Op 1 8/0.028 - CDS 180505 - 181161 876 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 174 98 Op 2 . - CDS 181158 - 182918 1490 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 182999 - 183058 7.5 + Prom 182986 - 183045 8.5 175 99 Tu 1 . + CDS 183177 - 183758 551 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A + Prom 183953 - 184012 7.5 176 100 Op 1 1/0.250 + CDS 184251 - 184928 284 ## COG0338 Site-specific DNA methylase 177 100 Op 2 . + CDS 184930 - 185994 474 ## COG3392 Adenine-specific DNA methylase 178 100 Op 3 . + CDS 185991 - 187409 551 ## Bmur_1620 hypothetical protein + Term 187602 - 187645 1.2 - Term 187966 - 188009 -1.0 179 101 Op 1 3/0.028 - CDS 188038 - 188877 850 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 180 101 Op 2 . - CDS 188919 - 189401 645 ## COG5528 Predicted integral membrane protein 181 101 Op 3 . - CDS 189398 - 189787 495 ## Nmul_A2144 NAD-dependent epimerase/dehydratase - Prom 189856 - 189915 5.2 - Term 189957 - 189997 4.0 182 102 Tu 1 . - CDS 190053 - 190571 654 ## COG1510 Predicted transcriptional regulators - Prom 190670 - 190729 5.5 + Prom 190638 - 190697 7.7 183 103 Tu 1 . + CDS 190816 - 191601 697 ## COG3384 Uncharacterized conserved protein + Term 191790 - 191832 -0.0 - Term 191824 - 191860 8.0 184 104 Op 1 . - CDS 191876 - 192178 180 ## PMIP19 putative conjugal transfer protein 185 104 Op 2 . - CDS 192236 - 192757 254 ## gi|261379479|ref|ZP_05984052.1| conserved hypothetical protein 186 104 Op 3 . - CDS 192822 - 193271 392 ## gi|241758819|ref|ZP_04756932.1| VirB6 protein - Prom 193344 - 193403 3.1 - Term 193375 - 193410 6.1 187 105 Op 1 . - CDS 193431 - 193733 237 ## PMIP19 putative conjugal transfer protein 188 105 Op 2 . - CDS 193801 - 194328 68 ## gi|255066593|ref|ZP_05318448.1| conserved hypothetical protein 189 105 Op 3 . - CDS 194386 - 195510 658 ## xccb100_1687 VirB6-like membrane protein 190 105 Op 4 . - CDS 195557 - 196207 587 ## gi|241758729|ref|ZP_04756842.1| hypothetical protein NEIFL0001_1044 - Prom 196344 - 196403 4.2 191 106 Op 1 . - CDS 196439 - 198889 1408 ## COG3451 Type IV secretory pathway, VirB4 components 192 106 Op 2 . - CDS 198952 - 199158 113 ## XAC2615 VirB3 protein - Prom 199205 - 199264 2.7 193 107 Op 1 . - CDS 199267 - 199656 503 ## Smal_2443 conjugal transfer protein TrbC 194 107 Op 2 . - CDS 199708 - 200346 217 ## XAC2617 VirB1 protein - Prom 200378 - 200437 7.1 + Prom 200395 - 200454 8.8 195 108 Op 1 . + CDS 200514 - 200978 270 ## Smlt3007 hypothetical protein 196 108 Op 2 8/0.028 + CDS 200990 - 201883 550 ## COG3736 Type IV secretory pathway, component VirB8 197 108 Op 3 11/0.028 + CDS 201886 - 202611 139 ## COG3504 Type IV secretory pathway, VirB9 components 198 108 Op 4 . + CDS 202614 - 203801 486 ## COG2948 Type IV secretory pathway, VirB10 components + Term 203804 - 203850 1.6 199 109 Tu 1 . + CDS 204654 - 205823 847 ## COG3505 Type IV secretory pathway, VirD4 components + Prom 205825 - 205884 2.5 200 110 Op 1 . + CDS 206010 - 206540 125 ## gi|298370418|ref|ZP_06981734.1| conserved hypothetical protein + Prom 206543 - 206602 1.6 201 110 Op 2 . + CDS 206633 - 208261 649 ## COG2931 RTX toxins and related Ca2+-binding proteins + Prom 208263 - 208322 8.7 202 110 Op 3 . + CDS 208345 - 209364 194 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis + Term 209480 - 209518 8.6 + Prom 209543 - 209602 8.0 203 111 Op 1 . + CDS 209636 - 209767 112 ## NGK_1972 putative ArsR-family transcriptional regulator 204 111 Op 2 . + CDS 209740 - 210540 526 ## COG3468 Type V secretory pathway, adhesin AidA + Term 210569 - 210600 3.4 Predicted protein(s) >gi|241320893|gb|ACQV01000009.1| GENE 1 151 - 1125 1543 324 aa, chain - ## HITS:1 COG:NMB1060 KEGG:ns NR:ns ## COG: NMB1060 COG0158 # Protein_GI_number: 15676944 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Neisseria meningitidis MC58 # 1 324 1 324 324 527 79.0 1e-149 MNTLNQFLAQHLPEHKLPQELASVLESVATACLDINAKVRLGALSGVLGMAGTGNIQGED QKKLDIIANNIMIDVLKANANIAGLASEEEDTYVATHENGGYLVLFDPLDGSSNIDVNIS VGTIFSILAKPEGALTTESFLQKGRDQVAAGYVLYGPQTQLVLTVGHGVFVFTLDDANQF LLTKENPHIPESTKEFAINMSNQRHWFAPVQQYIDELLAGETGVRGKNYNMRWVASMVAE IHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMSLLMEQAGGASNNAIEAMLDIQPTG LHQRVAVFMGSREEVEYVYNLHQK >gi|241320893|gb|ACQV01000009.1| GENE 2 1193 - 1546 408 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758870|ref|ZP_04756983.1| ## NR: gi|241758870|ref|ZP_04756983.1| putative lipoprotein [Neisseria flavescens SK114] # 1 117 1 117 117 185 100.0 6e-46 MNIRTPLACTLLLCACSESVKNEFKEEFTQSFRTEFVRLATEACVEKASGKSPFDSATTE KICRCIGEKTVDQINPEEATSLLGGSDSMSDELKKRIKDTSIACTKEVLDMADSKTK >gi|241320893|gb|ACQV01000009.1| GENE 3 1676 - 2521 1170 281 aa, chain - ## HITS:1 COG:NMA1260 KEGG:ns NR:ns ## COG: NMA1260 COG2961 # Protein_GI_number: 15794193 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Neisseria meningitidis Z2491 # 1 281 1 281 281 461 76.0 1e-130 MLSYRHAFHAGNHADMLKHFTLFLVLEYFNRKDKPYWYIDTHSGAGLYDLSGDEAQKVGE YKQGIALLEQADKLPAELAEFVGRLKQILPQDNLYCGSPWLAQALTRDSDKMRLFELHPT DFVHLQNNMREVRPARKAQVSQVDGYQGLISLLPPPPRRAAVLIDPPYEEKQDYRRVVQV LKDALKRFETGCYMVWYPCLSREESRKLPDELKKIAPDNYLHAELHVHTPRSDGFGMHGS GMFIINPPYMLAEQLQNNLPELAKILAQDAGAHYILESKTK >gi|241320893|gb|ACQV01000009.1| GENE 4 2647 - 3261 884 204 aa, chain + ## HITS:1 COG:NMA1416 KEGG:ns NR:ns ## COG: NMA1416 COG0307 # Protein_GI_number: 15794328 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Neisseria meningitidis Z2491 # 1 202 16 217 220 317 76.0 1e-86 MFTGIVQGMGKITDIAQPSPDFRTHTVELPPEIADNLQTGASVANNGCCLTITRIDGNKV SFDLMDETLRKTNLGSLKVGDSVNLERAARFGDEIGGHVMSGHVMAVTRISRIESSEFNR TVWFELPENLKPYILTKGFVGLDGCSLTIGEVSDSEFCVHLIPETLERTLFGSRKEGDLI NIEIDPQTQAVVDTVMRVLAQKAV >gi|241320893|gb|ACQV01000009.1| GENE 5 3278 - 4144 959 288 aa, chain + ## HITS:1 COG:NMA1415 KEGG:ns NR:ns ## COG: NMA1415 COG2607 # Protein_GI_number: 15794327 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Neisseria meningitidis Z2491 # 1 287 1 287 287 493 82.0 1e-139 MKLSNFLKKANSVLNRLDLILPDEAGKTDWRALAYRWHSVGKKGILESLPRPHTFPLSRL AAVGSQTDRLKRNTEQFLAGRPANNVLMTGARGTGKSSLVKALLHEYAERGLRLIEVDKS DLISLPALLTLLSERPEKFIVFCDDLSFETGDETYKALKTALDGGLSQRCTNVLVYATSN RRHLIPEYMDENGGTTGTRGEIHQKEAVEEKISLSDRFGLWLSFYPFDQNDYLTAVANWL DDFNVPFDDTARQAALQWAQMRGSRSGRSAWQFACDWAGRLPEERVLD >gi|241320893|gb|ACQV01000009.1| GENE 6 4210 - 4638 571 142 aa, chain - ## HITS:1 COG:NMA1414 KEGG:ns NR:ns ## COG: NMA1414 COG3678 # Protein_GI_number: 15794326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Neisseria meningitidis Z2491 # 9 142 12 144 144 143 52.0 9e-35 MSVALSRYPTFIFLALALLCSSLPAHAGPFLATLDDFHPNCDIRQLNLSADQHAALRRLR TDFKQINDKAYRKTVRSDRNRRQTIIKILSGDSFDSNAARDYVENRYLSSMDYAVDEMEI QYRFYHLLNPRQRQQWLSSCLR >gi|241320893|gb|ACQV01000009.1| GENE 7 4823 - 5017 120 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNQIRTGADNFGNLFSQAGKIGRQNTGSDTVVGHVYSPKVCSFVIIAFLTLCCMLPTTSL PSFL >gi|241320893|gb|ACQV01000009.1| GENE 8 4916 - 5596 1068 226 aa, chain + ## HITS:1 COG:NMB1244 KEGG:ns NR:ns ## COG: NMB1244 COG0036 # Protein_GI_number: 15677116 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Neisseria meningitidis MC58 # 1 226 1 226 242 386 84.0 1e-107 MTDYRIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA TVPVDVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPAT PVNILENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQNGRHIALEVD GGVKTDNIAEIAAAGADTFVAGSAIFGKPDYKAVIDEMRQQLAQVG >gi|241320893|gb|ACQV01000009.1| GENE 9 5702 - 7084 2347 460 aa, chain - ## HITS:1 COG:NMA1001 KEGG:ns NR:ns ## COG: NMA1001 COG1109 # Protein_GI_number: 15793957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 460 1 460 460 857 92.0 0 MANIARDIFKAYDIRGIVGKTLTNEAAYLIGKAIATRATEKGITRIALGRDGRLSGPELM EHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITGSHNPPDYNGFKMMLGGDT LAGEAIQELLAIVEKDGFVTADKQGSVTEKDISGEYHNNIVGHIKLKRPMKIVIDAGNGV GGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPKNLQDLIVELKNSDAEIGLAFDG DADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAKVIFDVKSTRLLAPWIKEHGGEPVM EKTGHSFIKSTMKKTGALVAGEMSGHVFFKERWFGFDDGMYAGARLLEILSAFDNPSEVL NKLPQSISTPELNIDLPEGSNGHKVIEELAANAKFEGATEIITIDGLRVEFPDGFGLMRA SNTTPILVLRFEADTQEAIERIQNQFKAVIESNPALKWPL >gi|241320893|gb|ACQV01000009.1| GENE 10 7206 - 8048 1141 280 aa, chain - ## HITS:1 COG:PM1973 KEGG:ns NR:ns ## COG: PM1973 COG2321 # Protein_GI_number: 15603838 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Pasteurella multocida # 1 278 1 275 275 342 67.0 4e-94 MDWKGREQSQNVEDRRGSRGGGGGGKTPGILGIIVVLVGAYYGVDLSGLVGGSSSMGIPT QQATRLDSQQEAELNELSRVVLADTEKAWGKYFQQHGQRYTPATMVLYEGGTSTACGTGQ SAMGPFYCPGDQKVYLDLSFYEDMRTKLESASDAAFAYVIAHEVGHHVQNLLGILPKVHK MQQQVGKKEANALSVKLELQADCFAGIWGHYAVNNNIFKAEDIQKAMLAAESVGDDRLQK QAQGYVVPDSFTHGSSEERMTWLKRGLESGDINQCNTFGN >gi|241320893|gb|ACQV01000009.1| GENE 11 8235 - 8732 564 165 aa, chain + ## HITS:1 COG:PM1470 KEGG:ns NR:ns ## COG: PM1470 COG1881 # Protein_GI_number: 15603335 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Pasteurella multocida # 1 165 6 170 170 273 76.0 1e-73 MKVSSKAIVNGEFEDKYGKRGSQFSPSGMPSYSIPFEIEDAPEGTKSFAVVLEDKDAISA SGFVWTHWLISDLKRTSVAENESISATDFTQGANTWASALGKFEIEEASFYGGMAPPNNR HRYELIVYALDTVLDLPRGFRFNELHFAMQGHVLDSACVVGTYDV >gi|241320893|gb|ACQV01000009.1| GENE 12 8809 - 9318 914 169 aa, chain - ## HITS:1 COG:NMA1002 KEGG:ns NR:ns ## COG: NMA1002 COG0652 # Protein_GI_number: 15793958 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 169 1 169 169 325 97.0 2e-89 MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRVIKGFMIQGGGMDENMN EKETRDPIQNEASNGLPNEKYTIAMARTSDPHSASAQFFINTADNAFLNFRSKELYGKTV VQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEPVIITKAEVI >gi|241320893|gb|ACQV01000009.1| GENE 13 9437 - 10852 2126 471 aa, chain - ## HITS:1 COG:NMB0792 KEGG:ns NR:ns ## COG: NMB0792 COG0471 # Protein_GI_number: 15676690 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 471 1 471 471 712 91.0 0 MDLNAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIYYILPYSTDANKGIALL LFVAALWFTEAVHITVTALMIPILAVVLGFPDMDIKKAMAGFSDPTIYIFFGGFALATAL HMQRLDRKIAVSLLRLSRGNMKVAVLMLFAVTAFLSMWISNTATAAMMLPLAMGMMSHLD QEKERKTYVFVLLGIAYCASIGGLGTVVGSPPNMIAAKALNLDFIGWMKLGLPMMLLILP LMLFSMYVILKPNLNERVEVKAESIPWTLHRVIALLIFLAAAIAWVFSSKIKAAFGISNP DTVIALIAAVAVVVFGVAQWKEVARNTDWGVLMLFGGGISLSALLQSSGASEALGQQVAS TFSHSPALLVIFVVATFIIFLTEFTSNTASAALLVPIFASIAAQMGLPEQVLVFVIGVGA SCAFMLPVATPPNAIVFGTGLIKQREMMNVGLLLNILCVVLVALWAYVVLM >gi|241320893|gb|ACQV01000009.1| GENE 14 11127 - 12290 1283 387 aa, chain - ## HITS:1 COG:PA4113 KEGG:ns NR:ns ## COG: PA4113 COG2814 # Protein_GI_number: 15599308 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Pseudomonas aeruginosa # 8 362 12 366 396 323 56.0 5e-88 MTSTFKQWVSVCALAVGAFIFNTTEYIPIALLSDIGQSFDKPATEVGMMITVYAWIVALL SLPLMLMTKNIERRKLLLMLFALFALFHALSFFSWNFNILLASRIGIALTHAVFWSITAS LAVRLAPAGKTNQALGLLSTGTVLAMVLGIPLGRVVGQYFGWQLSFLLIGVCAAGVMLVL AKNLPALPSQNTGSLSSLPSLFKRRNLMLLYAMTVLIITAHFTAYSYIEPFVLQVGGFKA EQVTIVLSLYGLAGFAASYLFGKWFAKSQRLFMLGAVAVILLSALLLLPFASFPYAVYAL VFIWGMAIVIVSLGMVSKVLAFASDATDVANSIYSGLYNVGIGGGALLGHYVTVWFGLSN IGIAGALLAAAGLAVCGLLFKEQDNLA >gi|241320893|gb|ACQV01000009.1| GENE 15 12436 - 12645 396 69 aa, chain + ## HITS:1 COG:NMA1476 KEGG:ns NR:ns ## COG: NMA1476 COG2608 # Protein_GI_number: 15794377 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Neisseria meningitidis Z2491 # 1 69 25 93 94 87 63.0 6e-18 MQTVTFNIDGMTCGGCVKSVTRLLEGVEGVEKAEVSLENKNAVITFDESKTDTDALIDAV EDGGYDVAL >gi|241320893|gb|ACQV01000009.1| GENE 16 12792 - 14987 2830 731 aa, chain + ## HITS:1 COG:NMB1325 KEGG:ns NR:ns ## COG: NMB1325 COG2217 # Protein_GI_number: 15677191 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis MC58 # 1 731 1 720 720 1257 94.0 0 MQQKVRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQVVFDDSQTSAADIAKI IEKTGYGAKEKTEDTLPQPEAENHIGWRLWLLFAINVPFLIGMAGMMIGRHDWMIPPLWQ FVLASVVQLWLAVPLYKSAWASIRSGLANMDVLVTIGTVSIYLYSVYMLFYPIYTFFFSP HAAHGMEHAYYHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKLTPTQVNVQRNG EWQQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESNPEEKKAGGKVLAG ALMTEGSVVYRATQLGSQTLLGDMMNALSEAQGSKAPIARVADKAAAVFVPAVVGIALLT FIVTWLIKSDWTVALMHAVAVLVIACPCALGLATPAAIMVGMGKAVKHGIWFKDAAAMEE AAHVDAVVLDKTGTLTEGKPQVAAVYCVPDSGFDEDDLYCIAAAVEQNAAHPLARAIVSA AQERGLEIPTAQNAQTVVGAGITAEVEGVGLVKAGKAEFAELTLPKFSDGVWDIASIVAV SVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIMSGDNQGTVEYVAKQLGIAHAFGN MSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAAANVSFAMKGGADVAEHTASATLMQH SVNQLADALLVSQATLKNIKQNLFFAFFYNILGIPLAALGFLNPVIAGAAMAASSVSVLS NALRLKRVNIE >gi|241320893|gb|ACQV01000009.1| GENE 17 15075 - 15299 267 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758764|ref|ZP_04756877.1| ## NR: gi|241758764|ref|ZP_04756877.1| hypothetical protein NEIFL0001_0852 [Neisseria flavescens SK114] # 1 74 1 74 74 133 100.0 5e-30 MDMMLLTNIVLIVLCIFTMLLVWSRNWKRKQAYFEKIKSNPENLKWVGQNLTGQEWKDLK VVSDHFGLPMLQAK >gi|241320893|gb|ACQV01000009.1| GENE 18 15455 - 16021 603 188 aa, chain + ## HITS:1 COG:no KEGG:Psta_2515 NR:ns ## KEGG: Psta_2515 # Name: not_defined # Def: lipolytic protein G-D-S-L family # Organism: P.staleyi # Pathway: Biosynthesis of unsaturated fatty acids [PATH:psl01040] # 3 183 54 229 245 93 32.0 5e-18 MTVYLIGDSVRLASEPYTRAALPEADIVSPLENCRSSYDVLDHIGQWTEGATVGDIIHIN CGLHDIRHNQGCNEPVADIETYRNNLTRIFDYLKQTGAKIIWASSTPFLESVHNIVKPSR RYLADLKAYNRVAEDLARQYGFAVNDLYSLMFGQDLTDVMLCDGLHFNEFGSKMIGKAVA EAILKQMD >gi|241320893|gb|ACQV01000009.1| GENE 19 16143 - 16391 496 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758895|ref|ZP_04757008.1| ## NR: gi|241758895|ref|ZP_04757008.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 82 1 82 82 98 100.0 1e-19 MSGELDKISGKVKEVVGDVSGNAKLEAEGLIQQGVGKVKEVVGDIEEKGSDVLQKGKEEA EHLVDEAKEKAESLINDIKRKF >gi|241320893|gb|ACQV01000009.1| GENE 20 16455 - 17483 1605 342 aa, chain - ## HITS:1 COG:NMA1164 KEGG:ns NR:ns ## COG: NMA1164 COG0547 # Protein_GI_number: 15794110 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 340 1 340 352 540 88.0 1e-153 MITPQQAIERLISNNELFYDEMTDLMRQIMSGQVPPEQIAAILTGLRIKVETVSEITAAA SVMREFATKVPLENADDLVDIVGTGGDGAKTFNISTTSMFVAAAAGAKVAKHGGRSVSSS SGAADVMEQMGTNLNLNPEQVAQSIQQTGIGFMFAPNHHSAMRYVAPIRRSLGFRSIFNI LGPLTNPAGAANQLLGVFHIDLCGILSRVLQQLGSKHVLVVCGEGGLDEITLTGKTRVAE LKDGKITEYDISPADFGMEVRRNLDEIKVENAQESLQKMNEVLDGKAGAARDIVVLNAAA ALYAGNVIASLADGVKAAQEAIDSGKAKAKKDEFIEFGKQFA >gi|241320893|gb|ACQV01000009.1| GENE 21 17572 - 18162 873 196 aa, chain - ## HITS:1 COG:NMA1163 KEGG:ns NR:ns ## COG: NMA1163 COG0512 # Protein_GI_number: 15794109 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Neisseria meningitidis Z2491 # 1 195 1 195 196 362 85.0 1e-100 MLLFIDNYDSFTYNIVQYFAELGQEVLVRCNDEITIEEIEALKPQYLVIGPGPCSPKEAG ISVAAMQHFAGRLPVMGVCLGHQTMGEAFGGNVVRAQTMMHGKVSPVFHHGTGMFKDLPN PVNCTRYHSLAIDRATLPDCLEITAWTEDGEIMGVRHKEYAVEGVQFHPEALLTEHGHDM LKNFLEEFKDYRPQKS >gi|241320893|gb|ACQV01000009.1| GENE 22 18338 - 19879 2115 513 aa, chain + ## HITS:1 COG:NMB1345 KEGG:ns NR:ns ## COG: NMB1345 COG5339 # Protein_GI_number: 15677211 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 508 1 508 516 705 67.0 0 MKKYLIPTAAVVVAAALGTPYYLGVKAEESLTEQQKLLQESGFLTVESHQYDRGWFSSTE TTVIRLKPTLLQNTQKYLPDNLKTVLQEPITVINHVTHGPFAGGFGTRAHVETEFQYHPE TKKVLDRFFGQQTPLTMTNTVYLSGDGKLSLNIPAFDYEELSGIKLNWKGFGGNTDYSQG FKSYRHDYLAPSLQVKLADKGDVSLENLRFQSETEDGLTKLSLGKSSITLDKFLLQWKEN IDYNVKLNELVNLVTNLQIGAFINPTGTIAPSKIEVSKLRFDTQTGEVDKFINSEGRFQF ESLTYGEDKYGPLDINVAAEHLDAASLLALKNKIAEVSMKKMSEEEIQASLIQTAKNEAS GLFTNNPVLNVKTFKFTMPHGDVDVSGKLAFKGLAAKDLNNLGDMLKKTEADFNMSVPQK LLEQLAVNQASSLFSVNAEDEAAGRASIDDINETLRLMVDSTIKSMASEKYLTLEDDNVK THLTLQNSELKLNGKVLQSDPEPEFDEADFPNN >gi|241320893|gb|ACQV01000009.1| GENE 23 19958 - 20341 757 127 aa, chain + ## HITS:1 COG:NMB1282 KEGG:ns NR:ns ## COG: NMB1282 COG0853 # Protein_GI_number: 15677149 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Neisseria meningitidis MC58 # 1 127 1 127 127 227 92.0 3e-60 MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGICVNEKVAIVNNNNGERLETYTI PGERGSGVVCLNGAAARLVQKGDIVIIMSYVMLSEPEIAAHEPKVVLVDENNKIRDVISY EPPHTVL >gi|241320893|gb|ACQV01000009.1| GENE 24 20416 - 21258 1147 280 aa, chain + ## HITS:1 COG:NMB1283 KEGG:ns NR:ns ## COG: NMB1283 COG2877 # Protein_GI_number: 15677150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 273 1 273 280 474 81.0 1e-134 MNIQINNITVSNDAPFTLFGGINVLEDLDSTLKACEQYVKVTDKLGIPYVFKASFDKANR SSIHSFRGVGLDEGMKIFQAVKREFNVPVITDVHEPYQCQPVAEVCDVIQLPAFLARQTD LVVAMAKTGNVINIKKPQFLSPSQMKNIVEKFQEAGNEQIILCERGANFGYDNLVVDMLG FGVMKKTCNNLPVIFDVTHSLQTRESGAAASGGRRAQVLDLALAGMATRLAGLFLESHAN PDQAKCDGPSALPLAQLEDFLTRVKAIDETVKSFAPMDIR >gi|241320893|gb|ACQV01000009.1| GENE 25 21315 - 23291 2009 658 aa, chain - ## HITS:1 COG:NMA1655 KEGG:ns NR:ns ## COG: NMA1655 COG0323 # Protein_GI_number: 15794549 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Neisseria meningitidis Z2491 # 1 658 1 658 658 1220 96.0 0 MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDN GSGIHSDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSH ATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLAL AHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAKPT FAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHP TKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTTTPMPSENDG ENLFDSASNYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAELY KKTDDIDLELSQFEQARFGNMPSETPTPKTDKQCSDGLPSQSELPPLGFAIAQLLGIYIL AQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADHAE MLTGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHILA TMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ >gi|241320893|gb|ACQV01000009.1| GENE 26 23328 - 23810 668 160 aa, chain - ## HITS:1 COG:NMB1018 KEGG:ns NR:ns ## COG: NMB1018 COG0454 # Protein_GI_number: 15676906 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 231 70.0 5e-61 MSLLTILRPATEKDCQAIHNAHLHAVQYACIRCYDETIMHTWESLLDINSYLETISDKNK ALWVVEYKGLIQGFFQVDFKEAQLDALYVHPLFHNLGLGTALLSRAEEMARNAGLSFLKL YASLNSVPFYRLNRYESLGTAVLQLNKTVRVECELMRKYL >gi|241320893|gb|ACQV01000009.1| GENE 27 23883 - 25019 1079 378 aa, chain - ## HITS:1 COG:NMB1019 KEGG:ns NR:ns ## COG: NMB1019 COG0026 # Protein_GI_number: 15676907 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Neisseria meningitidis MC58 # 1 378 1 378 378 664 90.0 0 MNTSPILPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPNAPAAEFADRHLCAPFDD QAALEELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVAIAQNRIQEKAWIRKAGLQ TAPYQVVCRSDDISDESAQFLPGILKTATLGYDGKGQIRVKTVDELKTAFAEHGGVDCVL EKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILAYSIVPARLSADVQQQARQMAQR LADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNSGHHTLDACAADQFQQQVRIMCNLP PADTKLLTSCCMANILGDVWKEDGGEPEWLPLQSNPNTHLHLYGKKAARKGRKMGHFTVL ANDADNAFQTAQTLHQSL >gi|241320893|gb|ACQV01000009.1| GENE 28 25103 - 25672 705 189 aa, chain - ## HITS:1 COG:kptA KEGG:ns NR:ns ## COG: kptA COG1859 # Protein_GI_number: 16132152 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNA:NAD 2'-phosphotransferase # Organism: Escherichia coli K12 # 4 186 39 216 218 193 53.0 1e-49 MILNEKQLKSISKFLSFILRHHPEQIGITLDKDGWVDIDTLLTQVNHPERGFKGNPLTYE VLLEVVENNDKKRFTLSEDGKRIRAAQGHSTAQVQVEHKVATPPQILYHGTAERSVPSIL EQGLHSASRHFVHLSADAETAVKVGSRHGKPVVLTIDTVAMLAAGHQFYLADNGVWLTEN VPPQFIGKL >gi|241320893|gb|ACQV01000009.1| GENE 29 25716 - 27191 2134 491 aa, chain - ## HITS:1 COG:NMA1247 KEGG:ns NR:ns ## COG: NMA1247 COG0147 # Protein_GI_number: 15794182 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis Z2491 # 1 491 1 491 491 976 95.0 0 MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSIYLKLANKPFTYLLESVVGGERFGRYS FIGLPCSHYLKTSGKHVDVYQNGKIVEQYDGNPLPFIEAFHNRFKTPEIPSLPRFTGGLV GYFGYETIYNFEHFAHRLKHTAKADPLGTPDILLMLSQELAVVDNLSGKIYLIVYADPSQ ANGYEHARERLEDIRTQLRQSCAIPLSLGSKQTQAVSEFGEEPFKACVNKIKDYIFAGDC MQVVPSQRMSMEFTDNPLALYRALRTLNPSPYMFYYDFGDFHIVGSSPEILVRRERDDVI VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKM VIEKYSHVMHIVSNVEGRLKDGMTNMDILAATFPAGTLSGAPKVRAMEIIEEVEPSKRGI YGGAVGVWSFNNDMDLAIAIRTAVIKNNTLFVQSGAGVVADSDPTSEWQETQNKARAVIR AAQMVQEGLDK >gi|241320893|gb|ACQV01000009.1| GENE 30 27327 - 27704 515 125 aa, chain - ## HITS:1 COG:no KEGG:NMC1014 NR:ns ## KEGG: NMC1014 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 119 1 118 121 124 62.0 1e-27 MFKRPEEIIVLILALLWVGLSYYFAAILISDAYTILLITVLTFVWAAICFLLWQRNLSRH IWPLFLGSLVACWWPYFTWLASDVPEGTWYSGWTFKSIIALIPVVAAYIFKWKRSRKNKI SNTLA >gi|241320893|gb|ACQV01000009.1| GENE 31 27841 - 28461 596 206 aa, chain + ## HITS:1 COG:NMA1237 KEGG:ns NR:ns ## COG: NMA1237 COG2840 # Protein_GI_number: 15794177 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 203 1 201 201 265 70.0 4e-71 MTANFQETLKALGKQAKKEAAEREVETKAKKQVEDVDFSKAVGKVTPLKNAGNYYEQPRD KSPIKPRPREMATLEQEDYFYVGSGGWEEPPASFSKNGQGKNDLMRLRNGHYPVVADVDL HGYTQEEAQQVLNEFIEFTKKRGVCGEIVHGSGLGSAGYKPVLKNMTRRWLMQHPDVLAY VEPRQGNDGAVRILLKRQRRDDDWKQ >gi|241320893|gb|ACQV01000009.1| GENE 32 28515 - 29003 576 162 aa, chain - ## HITS:1 COG:NMA1110 KEGG:ns NR:ns ## COG: NMA1110 COG4969 # Protein_GI_number: 15794057 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis Z2491 # 1 160 1 161 162 152 49.0 3e-37 MNTTSTKQLGFTLVEMMIAVAILAILSVIAIPSYNRYIERGYQSQAHAELVAINSAFKNQ MVKNPKWKTDEIKTQLDDFIASYKGHKDLADKYQYSAEMINASKSRAYRLKAIPTKTGYT LSVWMDSLGNAYKCTDIDSAKDSKTTMTNGKGCESVSKKKSS >gi|241320893|gb|ACQV01000009.1| GENE 33 29008 - 29553 447 181 aa, chain - ## HITS:1 COG:NMB0889 KEGG:ns NR:ns ## COG: NMB0889 COG4726 # Protein_GI_number: 15676785 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilX # Organism: Neisseria meningitidis MC58 # 1 180 1 194 197 169 56.0 3e-42 MRRQITLIKPERQQGYALFIVLMMMVVIALLVVTATQSYNTEQRISTNDADRKLATTLAE AALREGENQIFDIEGKKTTFTAKCEKGLCSTPNVKSNGDFTEEGNPTVDAWKRKCDKSLC IDANGTEYPLDKKSGIVNNPRYIIEYLGKTTEGRITYRVTAKAWGKNANTQVVLQSYVAS E >gi|241320893|gb|ACQV01000009.1| GENE 34 29532 - 30467 846 311 aa, chain - ## HITS:1 COG:NMB0888 KEGG:ns NR:ns ## COG: NMB0888 COG4966 # Protein_GI_number: 15676784 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilW # Organism: Neisseria meningitidis MC58 # 15 311 15 313 313 290 48.0 2e-78 MNNKRLLNHIPNKIAIRGFSILEFLVASLLSMIVLMAVSSTYFTARGLNKSANARIGIQQ DLRNAANMIVRDARMAGNFGCFNMANFPASAVIEDKSSDEYTLKTAGVNKLLPVKEINKL SYTGFVQTGKALLFQYGIDKADSAAKTAIASSCSGIAKPHIEIKDLAAAKSALKITNSDQ DGSIAIMKHEMIAYAVGKLGEESGLFRFQLSNDGSWSNPQLLIKGITTMDIHYIYAECPD SENASASGVNTESFDYKNALDISAKAKSPASIQIVLNNGSIDPSKEQDNKVDIYKINATI RGGNVCADRSL >gi|241320893|gb|ACQV01000009.1| GENE 35 30470 - 31117 574 215 aa, chain - ## HITS:1 COG:NMB0887 KEGG:ns NR:ns ## COG: NMB0887 COG4967 # Protein_GI_number: 15676783 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Neisseria meningitidis MC58 # 28 213 15 200 204 159 48.0 5e-39 MNITNPTHLRSFKGRLKTSSTSFTPKLQSGMTLIEVLIAMFVLAIGVLALLAVQLRTVSS VRESENQTAVAQITQNLIEGMLINPTLSEETDTAGEKTTRYKKSYDAYLKSDSKQTAKFE AKMTKAQLAQAQIAQFKADLAKALPEAQVFSTICKDSSGAEPTYENGFNAKCDGKGDTTI VKVLWSQDVEEENSAKNLNTSGHHVIYTYQSRVRD >gi|241320893|gb|ACQV01000009.1| GENE 36 31133 - 31831 600 232 aa, chain - ## HITS:1 COG:NMB0886 KEGG:ns NR:ns ## COG: NMB0886 COG4970 # Protein_GI_number: 15676782 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimT # Organism: Neisseria meningitidis MC58 # 3 229 4 221 222 217 49.0 1e-56 MYQTQKGFTLIELLIVITIAAVMAVIALPNMNQWIASRRAASQAEQIANLLRFARNEAVR RNLPVYICPVKIKSDGLSNNSCNSDYAGNGMLAYVEQNNVFNYQKQNNNDNDNDNNDDGD LSIRQIILNGDTNKVEYSFNYIPIGNDRSALSSSDPEEVWWKFRPNGTFEHSTDGKNYQF SDGHIKISLTDKSAANAETKKARATVLLINGNGHVEICAKNDERKMCEYTSK >gi|241320893|gb|ACQV01000009.1| GENE 37 31988 - 33394 1814 468 aa, chain - ## HITS:1 COG:NMA1105 KEGG:ns NR:ns ## COG: NMA1105 COG0305 # Protein_GI_number: 15794052 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 829 93.0 0 MSNYSDMPSEDREISALSLPPHSTEAEQSVLGGLMLENSAWDRIADVVSGEDFYRHEHRL IFRAIANLINESRPADVITVQESLERNEELEAAGGFNYLITLAQNTPSAANIRRYAEIVR ERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQIAESTAKSKQGFLEMPDLLK EVVERIDMLYSRDNPDEVTGISTGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAE HVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQSVLKTGRLQDEHWGRLNEAVVKLSD APMYIDETPGLTALELRARARRLARQFNGKLGLIVIDYLQLMSGSGRSDNRASELGEISR SLKALAKELQVPVIALSQLSRTVEQRTDKRPMMSDLRESGAIEQDADLIMFMYRDEYYNS DSPAKGLAECIIGKHRNGPVGKVFLTWMGQFTKFDNAAYVPESMLMED >gi|241320893|gb|ACQV01000009.1| GENE 38 33549 - 34130 469 193 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 5 193 5 199 201 185 45 2e-45 MEHKLPQLPYELDALSPHLTKETLEFHYGKHHQTYITNLNNQIKGTEFEEMPLEEIVKKS SGGMFNNAAQTWNHTFYWLGFTPKGQGKPAGELAAAIDAKWGSFEKFQEAFNACAAGTFG SGWAWLVKTPAGELDLVSTSNAGTPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWE IVNWDEVAKRFAA >gi|241320893|gb|ACQV01000009.1| GENE 39 34356 - 35897 1465 513 aa, chain + ## HITS:1 COG:NMA1574 KEGG:ns NR:ns ## COG: NMA1574 COG0477 # Protein_GI_number: 15794467 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 513 1 513 513 828 90.0 0 MKFLDREATIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPLTKLIGITESAAGDWKL TTVGWIFSIALAMLGASAAMFGTWMERVGPRKAMFVAACCFSLGFFVSAIGVHTHNLFLL YLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPLSVSLMNFF SSETSVGVAQAFVVLGLFYLVLMMFGAFTIRIPANGWKPKGYVAPKIKNKLVSSNHVNVS EAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQELFSEASVGKQAAIGAGAAAGFVSLL SLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLLYFAIPSIGASGNKALFVIGFCVIISM YGGGFAAIPAYLKDLFGTYQVGAIHGRILLAWSTAAVIGPVLVNYIRQSQIESGVPAAEA YSITMYIMAGLLIVGLLCNLSVRSVHEKHHEKDIKVAAHSGNPDDETAVSDAYLISKKVS AGGIGVWWRWALVCIPLGYGVIMVFVKALSLFN >gi|241320893|gb|ACQV01000009.1| GENE 40 35956 - 36801 700 281 aa, chain - ## HITS:1 COG:PM1172 KEGG:ns NR:ns ## COG: PM1172 COG3739 # Protein_GI_number: 15603037 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Pasteurella multocida # 1 281 1 281 281 402 75.0 1e-112 MLGKLDTWLTEHPKRKDLHGWRRFIVEFWFFGLKEARACLFAGLFFIAMFLIPKTGWLGI SRYDLLLIFAVSVQAAMLYFKLETWDEVKSITLFHLVGFALEWFKTSGDIQSWSYPDEAY TKIGGVPLFAGFMYAAVGSHIIQAWRLFDLKIKSHPPYWLGTLCALAIYINFFTHHYIGD YRWYLAAFALGLYARTTVLYTPYDTTRKMPLLLAFVLIGFFIWLAENLGTLFGVWRYPNQ IGAWASVHISKWSSWALLVMMTFTIVANLKHIKHTISVSKD >gi|241320893|gb|ACQV01000009.1| GENE 41 36835 - 38100 1455 421 aa, chain - ## HITS:1 COG:NMA1524 KEGG:ns NR:ns ## COG: NMA1524 COG0821 # Protein_GI_number: 15794418 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Neisseria meningitidis Z2491 # 1 420 1 420 421 757 90.0 0 MTTPKRRQTHQVKIDHLIIGSDAPVLVQSMTNTDTADAAATAQQVKELSDAGSEMVRITV NTPEAASKVAEIRSRLDDMGYTTPLIGDFHFNGERLLAEFPECGKALAKYRINPGNVGKG AKGDEKFAFMIRTAAENNKAVRIGVNWGSLDQSLAKRMMDANLASATPKPPEEIMKEALI VSALESAEKAVALGLPEDKIILSCKVSAVQDLIQVYRELGSRCRYPLHLGLTEAGMGSKG IVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEVIVGQEILQTMGLRSFTPMVTACPG CGRTTSTVFQELAQDVQNYLRQKMAVWRTEYPGVESLNVAVMGCVVNGPGESKLADIGIS LPGTGETPVAPVYVDGERKVTLKGDNIAAEFLQIVEDYVKTNYCEGGAKRKQNRIIPIQS A >gi|241320893|gb|ACQV01000009.1| GENE 42 38102 - 38986 995 294 aa, chain - ## HITS:1 COG:no KEGG:Daro_2986 NR:ns ## KEGG: Daro_2986 # Name: not_defined # Def: hypothetical protein # Organism: D.aromatica # Pathway: not_defined # 17 275 23 296 311 81 25.0 5e-14 MGNNDKINYDTQAAKTLGDELRKHRTDAKIDIQDVASRLKLSAEQIDALEKGEYSGFPGL VFVSGYLRSYARFLKIDEQTIAKHLLSITPQLEDHVYAVTRSANAGLSYTDTEKQGFPKW ILGIAALALAVGGVYFWQSKSSFENEQANIQNSKDVADTMKTPALKTDNVAVSEMTEDGK KEITNKPEVTNDQVASAASAVVQEEKPAVKVEKDELWIKVQYRSNLIITDKDGKVVFSRI VPAGSEQRLRGGAPYNVWIGIAAGSEANYGGTPIEPLKYRVTGEKSASFVAGKN >gi|241320893|gb|ACQV01000009.1| GENE 43 38987 - 39742 611 251 aa, chain - ## HITS:1 COG:NMB1309 KEGG:ns NR:ns ## COG: NMB1309 COG3063 # Protein_GI_number: 15677175 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilF # Organism: Neisseria meningitidis MC58 # 8 251 10 253 253 361 76.0 1e-100 MKIKFGFALLTALTLSACASSSGPSPKERAIQVSNIKTQLAVEYMRGQNYRQATESIEEA LKFNSKNDIAWLVRAEIYQYLKVRDKAQESFLKALSLKPDSAEVNNNYGWFLCNQMNAPA ESMAYFDKALADPTYPSPFIANMNKGICSARLGQYSLAQAYLERSLAANPQFFPAFKELA RTKMMAGNLNDADYYFRQYQSKVDVLQADDLLLGWRLATALGNKHAAYEYEAQLRANFPY SDELQTVTTGH >gi|241320893|gb|ACQV01000009.1| GENE 44 39751 - 40839 1315 362 aa, chain - ## HITS:1 COG:NMB1308 KEGG:ns NR:ns ## COG: NMB1308 COG0820 # Protein_GI_number: 15677174 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Neisseria meningitidis MC58 # 1 362 1 362 364 718 94.0 0 MKTNLLNYDLNGLTQHFAEMGEKPFRAKQVMRWMHQAGAQNFEEMTDLAKSLRAKLNEQA TIEVPKLMMAQESTDGTRKWLLDVGTGNGVETVFIPEAERGTLCISSQVGCALECTFCST GRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIM LDDHGYGLSRRRVTVSTSGMVPQMDRLRDAMPVALAVSLHASNDEVRDQIVPLNKKYPLK ELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHARELIELVKDVPCKFNLIPFNPFPNS GYERSTNENIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQVQDKTRRQQKWQQILV EQ >gi|241320893|gb|ACQV01000009.1| GENE 45 41008 - 41433 661 141 aa, chain - ## HITS:1 COG:NMA1521 KEGG:ns NR:ns ## COG: NMA1521 COG0105 # Protein_GI_number: 15794415 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 141 1 141 141 228 84.0 3e-60 MAIERTISIIKPDAVEKNVIGKIYSRFEENGLRIIAAKMKHLSEREAKEFYAVHKDRPFY EDLVKFMTRNPVMIQVLEGENAVAKNRELMGATNPADAAPGTIRADFAESVSVNAVHGSD SVENAAIEIAYFFSQSEICLR >gi|241320893|gb|ACQV01000009.1| GENE 46 41528 - 42664 924 378 aa, chain - ## HITS:1 COG:NMA1520 KEGG:ns NR:ns ## COG: NMA1520 COG1485 # Protein_GI_number: 15794414 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Neisseria meningitidis Z2491 # 1 377 1 377 383 706 90.0 0 MSNRDQLFTPPPFENHSPLTWYQAAAEQPNFIRDEAQARAIEYLDRLWTELMMFKRKRNR FLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKRRVHFHAFMAEIHQRLKVL KSEANPLKAVATEIAKETRVLCFDEFHVSDIADAMILGRLLENLLSEGVVLVATSNYAPS KLYPQGQNRSSFLPTIALIESNLTVLNVDGGEDYRLRTLRPAEIFFVPNNEENEQKLAAL FKEMSGISELNPGISIIHGREIPHKAQSERAIWFDFRALCFGPRSQADYLYLAEHYEMVF LSGLERLTPQEKAEARRLTWLIDVLYDFRVKLCATSAVGVNDIYVEGDFAEEFTRTASRM IEMQSEVYLEQLHLILSK >gi|241320893|gb|ACQV01000009.1| GENE 47 42925 - 43221 466 98 aa, chain - ## HITS:1 COG:NMA1516 KEGG:ns NR:ns ## COG: NMA1516 COG0776 # Protein_GI_number: 15794410 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 98 7 104 104 169 93.0 9e-43 MVRLAEVFAEKNGNQLLAKDVEYSVKVLVDTMTRSLARGQRIEIRGFGSFDLNHRPARIG RNPKTGERVEVPEKHVPHFKPGKELRERVDLALQESAH >gi|241320893|gb|ACQV01000009.1| GENE 48 43250 - 44929 2800 559 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241758882|ref|ZP_04756995.1| ribosomal protein S1 [Neisseria flavescens SK114] # 1 559 1 559 559 1083 100 0.0 MENFAQLLEESFTLQEMNPGEVITAEVVGIDQNFVTVNAGLKSESLIDVAEFKNAQGEIE VKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEAMENGDILSGVINGKVKGGLT VMINSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEE RKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGLLHITDLAWRRVKHPSEVLEVGQEV EAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYPQGTRLFGKVSNLTDYGAFVEIEQGIE GLVHVSEMDWTNKNVHPSKVVQLGDEVEVMILEIDEDRRRISLGMKQCQANPWEEFAANH NKGDKISGAVKSITDFGVFVGLPGGIDGLVHLSDLSWTEAGEEAVRKYKKGEEVEAVVLA IDVEKERISLGIKQLEGDPFGNFISVNDKGSLVKGSVKSVDAKGAVVALSEEVEGYLPAS EFAADRVEDLTTKLKEGDEVEAVIVTVDRKNRSIRLSVKAKDAKENREALNSVNAAATAN AGTTSLGDLLKAKLSGDQE >gi|241320893|gb|ACQV01000009.1| GENE 49 45090 - 45749 1069 219 aa, chain - ## HITS:1 COG:NMB1300 KEGG:ns NR:ns ## COG: NMB1300 COG0283 # Protein_GI_number: 15677166 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Neisseria meningitidis MC58 # 4 219 3 218 218 321 80.0 7e-88 MSLKQKVIAIDGPSASGKGTVASRVAEALGFLYLDSGALYRLTALYAQKHNVAWTDEDAV STLAETLPAQFEGSAVLLNGEDVSEQIRTEAIGMGASAVAQLPKVRAALLQRQRDFLTEK GLVADGRDIGSVIFPDAALKIFLTASANVRAQRRAKQLGIPCEGVAFERILSDIEARDEA DRRRPVAPLKQLPDALLLDTDNLSIEEAVKKVLDWYHKV >gi|241320893|gb|ACQV01000009.1| GENE 50 45966 - 46997 1397 343 aa, chain + ## HITS:1 COG:NMB1243 KEGG:ns NR:ns ## COG: NMB1243 COG2255 # Protein_GI_number: 15677115 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Neisseria meningitidis MC58 # 1 343 1 343 343 602 91.0 1e-172 MLQTDNLTSAQPQRIITAQNISAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKR GEALDHTLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF IDEIHRLSPVVEEILYPALEDYQLDIMIGEGPAARSVKIDLPPFTLVGATTRAGMLTNPL RDRFGIVSRLEFYQNKDLATIVARSAQLLQLDMGDEGAMEVAKRSRGTPRIANRLLRRVR DYADVKNNGVIDAEIANAALSMLDVDGQGLDVMDRKFLEAILHKFSGGPVGLENVAAAIG ESTDTIEDVIEPYLIQQGFLQRTPRGRVATERAYLHFGLKVQE >gi|241320893|gb|ACQV01000009.1| GENE 51 47120 - 49027 2578 635 aa, chain + ## HITS:1 COG:NMB1051 KEGG:ns NR:ns ## COG: NMB1051 COG0488 # Protein_GI_number: 15676937 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 635 1 636 636 1142 97.0 0 MNILSVENASFAVGHVALLDKTSFQLDSGEKIGLIGRNGAGKSSFLKILAGVQKLDDGQI IVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYHHVGHELENGSSEILLKEL NELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGGQKKRVALAQAWVQKPDVLLL DEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDNIATRIVELDRGILRSYPGSFSK YSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEARRTRNEGRVRRLEELRRQRAERRN VQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVIMDKFSAILQRGDKIGLIGPNGIGKTT FLKLILGELQPTYGRIRIGSKQEVAYFDQFRSALNENDTVFYTLGQGNDYVEVGGKKKHV MSYLEDFLFHPARAQSPVSSLSGGERNRLLLAKLFTRPANILVLDEPTNDLDIDTQELLE DLLRDYQGTVFLVSHDRMFLDNVITQSIVFEGQGRLKEYIGGYQDYIDAKSREDKIQTAS APKAVAEPEKVKPKANRTVKLSYKEQRELDALPDEIAALETEQAEINAQLSDPEIFKDYE KAGALQSRAEEIEMSLLEKLERWEWLEAKQNGEAV >gi|241320893|gb|ACQV01000009.1| GENE 52 49118 - 49549 623 143 aa, chain + ## HITS:1 COG:NMA1006 KEGG:ns NR:ns ## COG: NMA1006 COG2867 # Protein_GI_number: 15793962 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Neisseria meningitidis Z2491 # 1 143 5 147 147 256 85.0 1e-68 MKKVEKNVLVLHSAKEMFELVDKVEDYPKFLPWYSKTEVIERKGNELKARLFMDYMRVKQ SFATHNHNIPGQEIRMDLLEGPFKTLRGTWKFIDLGDDMCKVEFRLEYDFSNAVLSAMIS PVFGHLAGTLVDAFIKEADRRYA >gi|241320893|gb|ACQV01000009.1| GENE 53 49542 - 49814 362 90 aa, chain + ## HITS:1 COG:NMA1005 KEGG:ns NR:ns ## COG: NMA1005 COG2914 # Protein_GI_number: 15793961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 90 1 90 92 126 78.0 9e-30 MLEIEIVYGLADRQVLKSMTVVEGTTVREAALQSGLEVEFPELDLQQAPLGIFGKAVKDE TALRDGDRIEVYRPLLIDPKEARRKRVGQE >gi|241320893|gb|ACQV01000009.1| GENE 54 49869 - 50447 720 192 aa, chain + ## HITS:1 COG:NMB0795 KEGG:ns NR:ns ## COG: NMB0795 COG0193 # Protein_GI_number: 15676693 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Neisseria meningitidis MC58 # 1 192 1 192 192 327 84.0 7e-90 MSLKIKLIVGLGNPGQEYEQTRHNVGFWLLDELAWKWKVNFKDEKKFYGEVARATTPDGD VWLLKPMTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLK DIQARLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQQIDDSIAKSLQGLPAVLNG EWEEATRFLHSK >gi|241320893|gb|ACQV01000009.1| GENE 55 50551 - 50760 295 69 aa, chain + ## HITS:1 COG:no KEGG:NGK_0536 NR:ns ## KEGG: NGK_0536 # Name: not_defined # Def: putative ring dioxygenase beta subunit # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 67 1 67 68 96 74.0 3e-19 MSELTSLMQTEAPGIVGETLDFCLYECSIEDAPDAEEVAQWRDILKARGGKFVRLADICQ TWLDEEADK >gi|241320893|gb|ACQV01000009.1| GENE 56 50757 - 51125 292 122 aa, chain + ## HITS:1 COG:no KEGG:NMB0794 NR:ns ## KEGG: NMB0794 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 4 114 3 113 120 113 54.0 2e-24 MKALPLNKFTAAALIWFAAAIYALLFKEGGNSAPPFPHFDKVGHFGLFFGQAWLCAKIFI QDNRNIPYKGILFAALLFAVGSELAQAFLTATRQGSIADGIADMAGTAAALWFAEKVKTA KS >gi|241320893|gb|ACQV01000009.1| GENE 57 51404 - 52579 1294 391 aa, chain - ## HITS:1 COG:NMB0665 KEGG:ns NR:ns ## COG: NMB0665 COG0635 # Protein_GI_number: 15676563 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 391 1 391 391 751 92.0 0 MTQIAFQRPGQLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQL ELPNIWGRPVETIFFGGGTPSLFQAKSIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEK FQGFKDAGITRLSIGVQSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPN QTVQTALNDVQTAIATGVSHISAYHLTMEPNTPFGHTPPKGLPQDEAALDIEDAVHGELE GAGFIHYETSAFAKANMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRSRHPNDY LAAMQSNPHEAVERKTVAAEDLPFEFMMNALRLTDGVPASTLQERTGVPTAKIMAQIETA RQKGLLESDPTVFCPTEQGRLFLNDLLQCFL >gi|241320893|gb|ACQV01000009.1| GENE 58 52676 - 53038 82 120 aa, chain - ## HITS:1 COG:SPy1971 KEGG:ns NR:ns ## COG: SPy1971 COG0526 # Protein_GI_number: 15675765 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pyogenes M1 GAS # 3 119 2 122 124 78 40.0 3e-15 MPKPTPEELAAFAKHVAAFIPTTPDELLQLIDSQEAAIVFLGKPSCSYCRRFVAKLSTVS LNKQLTIRFTDSSNKIALKTFREQHGIKTVPALLNISQGKIKSVCNSKLSEEEIEAFLSA >gi|241320893|gb|ACQV01000009.1| GENE 59 53098 - 53607 581 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758878|ref|ZP_04756991.1| ## NR: gi|241758878|ref|ZP_04756991.1| hypothetical protein NEIFL0001_0900 [Neisseria flavescens SK114] # 1 169 1 169 169 296 100.0 2e-79 MSPKQILVVAIRLVVLIGIVQTLGGIATIFAQSESMYDSKQISSVLMLYGLYLIAWLLLW CFPAAIANRLLPEHLQTVQEAPKHPAPWLTTGIVLIGIYTVFQAIPDLIYQFSLYLFVQS IAIDTHTSVWADLGAQNQAGILANIAQLFIGIFLLFGAPKLSSWMRKRL >gi|241320893|gb|ACQV01000009.1| GENE 60 53682 - 54275 463 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|71274727|ref|ZP_00651015.1| Ham1-like protein [Xylella fastidiosa Dixon] # 1 190 1 191 200 182 50 8e-45 MFEKIVLASGNAGKLKEFSRLFADLNIEVLPQSQFNTPECPEPYHTFVENALAKARHAAK YSSLPALADDSGICTNALNGAPGIFSARYAGENPKSDAANNAKLSADLADKDDKSCYYVC VLVLVRHENDPQPIIAEGIWRGQWQAEAAGTNGFGYDPHFYLAEHGCTAAELHPETKNAE SHRAQALRELLRKIETL >gi|241320893|gb|ACQV01000009.1| GENE 61 54285 - 54515 404 76 aa, chain - ## HITS:1 COG:no KEGG:NGO0222 NR:ns ## KEGG: NGO0222 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 63 1 63 77 63 66.0 2e-09 MTRQKAYLLLTALFTLMFIVLILLGAYLLSIHSKQFAVAAFLFAFAAVFAQIGSLALYIR HKARAQMARMQQTENH >gi|241320893|gb|ACQV01000009.1| GENE 62 54637 - 55767 1623 376 aa, chain - ## HITS:1 COG:NMB0928 KEGG:ns NR:ns ## COG: NMB0928 COG3317 # Protein_GI_number: 15676822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Neisseria meningitidis MC58 # 1 376 24 398 398 569 77.0 1e-162 MTYIKPIVVALALISMTACSGSKKEQPKLDYQSQSHRLVKLEVPPDLNNPDQGNLYQLPA GSGAVRASDFNKRRTQAVQQPANAEVLKSVKGVRLERDGNQRWLVVEGKSPREIWPLLKV FWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLLDKVGLGGIYSTSERDKFIIRI EQGKNGSTDIFFAHKGMKEVYADRKKDTTMWQPGENDPNLEAAFLARFMQYLGVDGQQAE QALTQSVAARSNASELARVDNGTLLLAGDYGRNWRRTALALDRIGLTVIGQNAERRAFLV QQAPTEGEAVANKKPGLFKRVFGKGKAEAPKTYPEIIVYVEPINNGARLHLLNKDGSPYK GSDASTLLSRLHTELR >gi|241320893|gb|ACQV01000009.1| GENE 63 55849 - 56724 1217 291 aa, chain - ## HITS:1 COG:NMB0929 KEGG:ns NR:ns ## COG: NMB0929 COG0329 # Protein_GI_number: 15676823 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 502 87.0 1e-142 MLKGSLVALITPMNQDGSINYEQLHDLIDWHIENGTDGIVAVGTTGESATLPVEEHLAVI EATVKHVNKRVPVIAGTGANNTVEAIALSKAAEQAGADYTLSVVPYYNKPSQEGIYQHFK AIAEATSIPMVIYNVPGRTVVSMSNDTILRLAEIPNIVGVKEASGNIGNNIELINSVPEG FVVLSGDDPTGLPFMLCGGHGVVTVAANVAPKLFADMCRAALEGDIATARRLNEQLTPIY NTMFCEPSPAAPKWGLSLLGKCEPHVRLPLVALTEAGQAKVRAALEKSGQI >gi|241320893|gb|ACQV01000009.1| GENE 64 57061 - 58452 309 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 48 461 27 434 447 123 26 5e-27 MAGMTEKQAKSLDLVYGLEDKPPFGNALLSAVTHLLAIFVPMITPALIVGGALELPVEMT AYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTVMIALGTGMKEGGLTEDVM ISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVMLIGLSLVHVGITDFGGGFGAK ADGTFGSMENLGLASLVLLIVLVFNCLKNPLLRMSGIAVGLIVGYIVALFLGKVDFSALQ NLPLITLPVPFKYGFAFDWHAFIVAGAIFLLSVFEAVGDLTATAMVSEQPIEGEEYTKRL RGGVLADGLVSVIATALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAAILVLLGLFPVIG RAFTTIPSPVLGGAMVLMFGLIAIAGVRILVSHGIRRREAVIAATSVGLGLGVAFEPEVF KNLPVLFQNSISAGGIMAVLLNLVLPEDKTDKAVKVETDSLDH >gi|241320893|gb|ACQV01000009.1| GENE 65 58569 - 59711 1375 380 aa, chain + ## HITS:1 COG:NMA2030 KEGG:ns NR:ns ## COG: NMA2030 COG0116 # Protein_GI_number: 15794910 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 2 379 3 380 380 614 77.0 1e-176 MTVYSLFITCPRGLEAPLTQELENMACQDIRAVDGGVACKGTMEQVYRINLHSRVASRVL LRLTKGGYRNEHDIYKLARNLHWTGWFKLEQTFKVKVEGKRANVKSLDFVGLKIKDAVCD AFRDIYDARPSVGKINPDIRIHAFIDERNVEIFIDTSGEALFKRGYRQDTGEAPLRENLA AGLLLLAGYDGTQPFQDPFCGSGTIAIEAAWIATHRAPGLMRRFGFEKLQNFDKEKWQAL RREAEKQIKPAAAPISGSDNDRYMIRAALANAQAAEVDNFIRFDVQDAQAARPNGEHGIM ISNPPYGVRLAEIQALQALYPQLGTWLKQHYAGWLAGMLTGDRDMPKFMRLSPKRKIPLF NGNLDCRLFLMDMVKGSNRG >gi|241320893|gb|ACQV01000009.1| GENE 66 59999 - 60508 377 169 aa, chain + ## HITS:1 COG:no KEGG:DNO_0911 NR:ns ## KEGG: DNO_0911 # Name: nrdG # Def: anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4) # Organism: D.nodosus # Pathway: not_defined # 1 156 1 156 160 212 65.0 4e-54 MSSLKFTVEQIVWQEVPGEVSLAFLFSGCPLRCKGCHSADTWKEGIGTELTEDYLKGRLK RYRGLISCVLFMGGEWQPKALQKMLAIVAQEGLKACLYTGLEREELESVSDGILPYLTYL KTGRWQMELGGLDSPTTNQKFVDLRTGEVLNRLFIKDKPAPKVFPVASI >gi|241320893|gb|ACQV01000009.1| GENE 67 60626 - 62407 2253 593 aa, chain + ## HITS:1 COG:TM0385 KEGG:ns NR:ns ## COG: TM0385 COG1328 # Protein_GI_number: 15643151 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Thermotoga maritima # 13 589 39 644 651 242 30.0 2e-63 MIRLHPEQLNGKLQFMHDYISAQNAADGSKMDANANVTQKNIATMEAEIMKDFFVQINRA QVSRKIAEIFDQSVADEYIRQIEAHEIYVHDETSLKPYCVSVTLYPFLLDGLSKLGGESK APQHLASFCGSFINLVFAISAQFAGAVATVEFLTYFDYFARKDYGNDYLETHGKEIANHM QQVVYSINQPAAARGYQSVFWNISVYDQYYFDAMFGDFVFPDFSKPVWASVAKLQNFFLK WFNQERTKAVLTFPVVTAAMLTDGGKCKDTVFADEMAKELAEGNSFFVYLSDNPDSLASC CRLRNAIEDRTFSYTLGAGGVATGSINVITINMNRLEQDGRDLAAEVAKIHKYQYAYRKL MEEYQAAGMLPVYDAGFITLDKQFLTIGINGMAEAAESRGIKVGYNDDYINFVQGRLKTI FEANQAASKHYGVKFNTEFVPAENLGVKNAKWDKADGYKVSRECYNSYFYVVEDEEINAL DKFLLHGKELVDWLDGGSALHLNLDEALPESGYRSLLDIAAQTGCNYFCVNVRITICNEC GHIDKRTLHACSACGSHDIDYGTRVIGYLKRVSAFSSGRRKEHALRHYHRKAA >gi|241320893|gb|ACQV01000009.1| GENE 68 62600 - 62989 747 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758848|ref|ZP_04756961.1| ## NR: gi|241758848|ref|ZP_04756961.1| putative lipoprotein [Neisseria flavescens SK114] # 1 92 1 92 129 77 100.0 4e-13 MKTSALLAALLAALSLSACGGGSDSSSSAVCDEYEKAFAEATKDVDAATKDMMQKSFEQT KEALKNLPADQRDATCKTSLDALKGVPAAETPEDKAEEAKDAAEEAKEDAKDAAEDAKEA AEDAKEEAK >gi|241320893|gb|ACQV01000009.1| GENE 69 63283 - 63813 416 176 aa, chain - ## HITS:1 COG:NMA1155 KEGG:ns NR:ns ## COG: NMA1155 COG1943 # Protein_GI_number: 15794101 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 29 138 1 110 120 179 76.0 3e-45 MARYRINFIAGGTFFFTVKLANPKSSLLVEHIDLLRTAYMDVQKQYPFETVAVCVLPNHI HAIWTLPPDDADYSLRWRLIKTKFSAHFPRAENLSASKQRRHKRGIWQRSFDEHTVRDET NLQRCADYIHFNPVKHGLCGNVRDWAFSSFHRYVRDGWLPLDWGGTKETAVMSFGE >gi|241320893|gb|ACQV01000009.1| GENE 70 64014 - 65006 419 330 aa, chain - ## HITS:1 COG:no KEGG:Dtox_3921 NR:ns ## KEGG: Dtox_3921 # Name: not_defined # Def: hypothetical protein # Organism: D.acetoxidans # Pathway: not_defined # 13 260 10 245 306 77 29.0 5e-13 MIDQEYCPILQPDEIINTSIMGGKLAIIVEGRNDFPIYDDLFKDKGIDSEIYIAEELYFE NKQVKSRTGGCYYVIHTIDTICKNSNLSINILKRHILGVVDLDMRKYRNEIPTNELIFTL DRYSIENHFVNIKSCKFLVHSYTNAPKSYLNDEWIDKYFENIKNTIVNDIFLIVVEAIRN AILPKDSYEKKGIIKFEPDSLECYLKNPLITEFLEHEKVAIETFHTEQKIQKKWEDMLIS CKGKWLLNYFIKLVKYDIDNNRFTSLCTEYNAKYASQKHRFKANRKLNLNDAINSLKNNV SLIDGLDRLFEKIAQVISESASSTSPEGCK >gi|241320893|gb|ACQV01000009.1| GENE 71 65023 - 65538 108 171 aa, chain - ## HITS:1 COG:no KEGG:Dtox_3922 NR:ns ## KEGG: Dtox_3922 # Name: not_defined # Def: hypothetical protein # Organism: D.acetoxidans # Pathway: not_defined # 1 167 270 440 440 129 45.0 3e-29 MEALIDISDNPLKKKIIQRLISDQNEKNNILDFLIHNMIKELENEKQLLISINSAIDGFN EHLSDNKKLVITSEEICIDIKQVRYPIDILSSGEKHIFTFLALINVVGRSRDFLIIDEPE ISLNVSWQRRILSLLKEIAPKTQIIVASHSPLISKDMTKSLVPIKHLDNDE >gi|241320893|gb|ACQV01000009.1| GENE 72 66382 - 69228 3860 948 aa, chain - ## HITS:1 COG:NMB0962 KEGG:ns NR:ns ## COG: NMB0962 COG0178 # Protein_GI_number: 15676855 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Neisseria meningitidis MC58 # 1 948 1 948 949 1911 98.0 0 MCNHHPKHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEG QRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLR LLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGEFVDFFADL QAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGN ERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDP EKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPEKVKKVILHGS GKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGG ARLRKEARYVYVSGEPLHEVSAWPLTKTHQFFETLDLDGNKKQIAEKILKEITERLGFLI NVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATL KRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCEKSVTGQY LSGKKSIAVPSERTPVNPDRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSGKSTLIN DTLAKITARELNRAQEEPAPYDDIHGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIR ELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYN RETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSG GEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNL DVIKTADYIVDLGPEGGDGGGRIIACGSPEDVAKVKGSYTGKYLINIL >gi|241320893|gb|ACQV01000009.1| GENE 73 69380 - 70243 1011 287 aa, chain - ## HITS:1 COG:NMA0967 KEGG:ns NR:ns ## COG: NMA0967 COG1091 # Protein_GI_number: 15793924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Neisseria meningitidis Z2491 # 1 286 1 286 287 381 69.0 1e-106 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY TAVDKAEENAEAAFAINATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGSNFVKTMLRLAKERDSLSIVHDQTG CPTYAGDLAHAIISLLQQPTSPRGIFHYCGNKSATWYEFTKAIFQTAHQLDDSFRIPELN AITTDQYPLPAPRPAYSIMDCSRLETKFGIKPSDWQKALREILRTID >gi|241320893|gb|ACQV01000009.1| GENE 74 70688 - 72073 1482 461 aa, chain + ## HITS:1 COG:alr7304_2 KEGG:ns NR:ns ## COG: alr7304_2 COG2931 # Protein_GI_number: 17233320 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 178 424 575 822 1125 164 44.0 2e-40 MARSYSGHRGPQASKPIWTPGKPYCSSIPGQSDPAHFCGSSKSSGSTGSTARIGRVPPVV NVVPGSPYHPWHTNSSNRLRYPKPQPKPQRKPPQPKPEPQPEPQPQKPVPQKPVPQPQPQ PKPQPQPQPQPKPQPKPEPKPKPEPKPKPDCKDCADDHNQDNSYGHEDKNPGNVIRPNVI RGTDVKDTIYGTAGEDIIYGGNGADVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGDGN DYLNGGSGADIMRGGDGNDVYFVDDADDQVIEYGNLNGGIDTVRTVIDYTLTDNVENLFL QGMQNLNGTGNSLNNNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGND TYFFDKGYGHDTIREESGNDTLLFGKGIAASDVLLSKSGANLTVSVGSDSITIDDWFTGN NHKVENFKFADGSTYQVTGHGDYYSLSAVNHIQEQTQVSGW >gi|241320893|gb|ACQV01000009.1| GENE 75 72226 - 73089 1401 287 aa, chain + ## HITS:1 COG:NMB0757 KEGG:ns NR:ns ## COG: NMB0757 COG0152 # Protein_GI_number: 15676655 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Neisseria meningitidis MC58 # 1 287 1 287 287 549 95.0 1e-156 MSEISLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPGKGEILTQISNFWFK KLAHIMPNHFTGHTVYDVLPENEAKVLEKRAVVAKKLTPVKVEAIVRGYLAGSGWKDYQK TGSVCGIQLPEGMQEAQQLPEVIFTPSTKAEVGDHDENISFEECERIIGKELAAEVRAKA IQLYTEAAEYAKSRGIIICDTKFEFGLDEEGTLTLMDEVLTPDSSRFWPADQYKVGTNPP SFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEKYQEALTLLTQD >gi|241320893|gb|ACQV01000009.1| GENE 76 73326 - 75446 1964 706 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 1 701 1 701 714 761 58 0.0 MFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV DPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSQLDLVVA GTSKAVLMVESEADILSEEVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE ELVAKVREIAGETIKEAFKIRQKQARSAKLDEAWNAVKEALITEETDTLAANEIKGIFKH LEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALLAVLPEPE DFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKEARLHILDQMKA AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRSITAETGTEINIAEDGTITIAAT TQEAGDAAKKRIEEITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALLEAPAREEKAAE >gi|241320893|gb|ACQV01000009.1| GENE 77 75612 - 77303 2083 563 aa, chain + ## HITS:1 COG:NMB0997 KEGG:ns NR:ns ## COG: NMB0997 COG0277 # Protein_GI_number: 15676888 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 563 1 563 563 1127 94.0 0 MNATQLISRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVVRPGTVLEMWQILQACV EADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRLNIIQPINNNEQVVCLPGSTLNQ LELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQRGPAYTEMALFAQINEEGKLE LVNHLGIDLGETPEEILTNLQGFHYQKKDIVQNAGKGHDHAYCDHVRQVNEPTAARFNAD PARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIGTNDINELTDIRRAALGEFKSLPVS GEYIHRDAFDVADVYGKDTFYVIKKFGTHQLPKLFDFKARVDRFGKKVSFLPKHFSDKFM QLVSKILPDHLPKSMRNYRDKYEHHLILKMGGEGVEEARAFLKEYFATHGGAFFECNAEE TQAAMLHRFAVASAAIRYRAVHDDEVEDLVALDIALRRDDRDWFETLPPEIDNKIIHKLY YGHFMCHVFHQDYIIKKGNDCMALEHEMLHLLDQRGAQYPAEHNVGHLYEAKPELKQFYK KLDPTNSFNPGIGKTSKKKNWAE >gi|241320893|gb|ACQV01000009.1| GENE 78 77365 - 78729 1932 454 aa, chain - ## HITS:1 COG:PM0380 KEGG:ns NR:ns ## COG: PM0380 COG0733 # Protein_GI_number: 15602245 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 2 453 3 454 455 611 74.0 1e-174 MSSNQPRQTWSNRLTYILTVAGATVGFGATWRFPYLVGENGGGAYVFLFCIAMLVIGIPM ILVENVIGRRKGVNALDAFGGTMNGKPVAKVWKLVGWMGLLGAFGIMAYYMVLGGWVISY IINIIGGNLDISSPVSGEVTKSFFTEHIENSPWEIAFYTFLFVVVNQWILVKGVIGGIEK AAKYLMPLLFLFLIAMVVRNVTLPGAMEGITFYLKPDFSKITAKLFVFVLGQVFFALSLG FGVMITLSSYLDKNEDLVQTAVITAITNTLIAVLAGFMIFPSLFSFGVAPNSGPTLVFQS LPIVFSNMWAGSVFAVIFFSLLLIAALTTSLTIYEVLITTIQEKTKIRRAAAITIVLAGI FIFGNIPSILSYGPWKDISVFGKNIFDAFDYISGNILFMLTALGSALFVGFVMKDEAKDE LLYKGNHTTVNIWFAYVKYLVPLVILLIFISNLF >gi|241320893|gb|ACQV01000009.1| GENE 79 79514 - 80197 958 227 aa, chain - ## HITS:1 COG:NMA1508 KEGG:ns NR:ns ## COG: NMA1508 COG1187 # Protein_GI_number: 15794407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis Z2491 # 1 226 1 226 230 330 66.0 1e-90 MQLLKYIQSQGLGSRKQCQWLIDNDCIAINGEIHNRAKDNIDPSQVHTLSVDGEEIAAVP MPHFYILLHKPADYETSHKPQQYPSIFSLFPDHMRNIDMQAVGRLDADTTGIILITNDGQ FNHRVTSPKHKVPKLYRVTLKHPADDTLCTTLKNGVLLHDDNETVAAAEAVLTDPTTLMM TITEGKYHQVKRMVAAAGNRVEQLHREKFGDWNVDDLAAGEWKFIQI >gi|241320893|gb|ACQV01000009.1| GENE 80 80344 - 80820 278 158 aa, chain - ## HITS:1 COG:NMB0744 KEGG:ns NR:ns ## COG: NMB0744 COG3467 # Protein_GI_number: 15676642 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Neisseria meningitidis MC58 # 1 153 1 152 159 154 47.0 5e-38 MPESIFKQVSLDILRLHQQAIRSLIATKCCDECEVHDAVFITLDGRYYVWLPCMGKSPQS ETGILLIEDEDGNTRLSWVAGTREVKQKDSLYNRVVSALQRKMQRTKNKFIQSANARLLE LTPQQGRLTTNSKDFSLSPHDLMKALYPATHQIGEFAL >gi|241320893|gb|ACQV01000009.1| GENE 81 81162 - 81899 884 245 aa, chain + ## HITS:1 COG:NMB1514 KEGG:ns NR:ns ## COG: NMB1514 COG0847 # Protein_GI_number: 15677367 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 1 245 1 244 244 400 81.0 1e-111 MSQRQIILDTETTGLYPENGDRLVEFAGLEMINRQMTDSNLHLYVHPERDMPEEAAKVHG LTIEVLEAKNAPPFAQVGKQIADFIRGAELIIHNAKFDVGFLNMEFRRMGLPSIEELGCK VTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALIDCELLGEVYLAMTRQQFDLM GGEAEEEGEVKQTVIAETKRTSQLKVIKANADELAAHEKYLDDLGEACVWRKAETSDEAN AGVSA >gi|241320893|gb|ACQV01000009.1| GENE 82 81896 - 82582 265 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 7 227 6 225 234 106 33 7e-22 MMRRNIALIPAAGVGARFGAGKPKQYVEINGKTVLQHTIEIFEQHSRIDLIAVILSPEDS VFQTALSEKVRIFRVGGASRAETVRNGVSTLLEQGLAEAKDNILVHDAARCCLPAEALTR LLDETGENDEGGILAIPVADTLKRSDGSHHIDETVARAGLWQAQTPQLFQTALLHRALSV DDLSKITDEASAVEKLGIWPRLVPGDTRNLKLTLPQDEYIVRLLLKAV >gi|241320893|gb|ACQV01000009.1| GENE 83 82615 - 83094 678 159 aa, chain + ## HITS:1 COG:NMB1512 KEGG:ns NR:ns ## COG: NMB1512 COG0245 # Protein_GI_number: 15677365 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Neisseria meningitidis MC58 # 2 158 3 159 160 272 89.0 1e-73 MNIRVGQGYDVHQLVEGRDLILGGVNIPFEKGLLGHSDADALLHAITDALLGAAGLGDIG SHFPDTAAEFKDADSRVLLREAYQSVQELGWKVVNVDTTVIAQKPKLAPHIPAMRANIAA DLGLPESCVNIKGKTNEKLGYLGRMEAIEAQAAVLLIKA >gi|241320893|gb|ACQV01000009.1| GENE 84 83138 - 83809 1112 223 aa, chain + ## HITS:1 COG:NMA1711 KEGG:ns NR:ns ## COG: NMA1711 COG0120 # Protein_GI_number: 15794604 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 223 396 93.0 1e-110 MATQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSGKKIKGAVSTSKKSSEL LAKYEIPEVSLNEVMGLAVYVDGADEVNHALQMIKGGGGAHLNEKIVASASDKFVCIADE SKYVSRLGKFPLPVEVVENARSLVSRKLLAMGGQPELRVGYTTFYGNQIVDVHGLNIDQA LKMEDEINKITGVLENGIFARDAADVLVLGTAEGAKVILPCQD >gi|241320893|gb|ACQV01000009.1| GENE 85 83910 - 84626 715 238 aa, chain + ## HITS:1 COG:NMA1710 KEGG:ns NR:ns ## COG: NMA1710 COG1525 # Protein_GI_number: 15794603 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Neisseria meningitidis Z2491 # 1 238 20 233 233 213 51.0 2e-55 MPVVLSVLGALGYSSRDTELIRTGVSVAATLAQGDNIGLEKVNEWLGENVVKATSDTKAE AKPKPEQKQKQKSSGQSYTYNGKIIKIHDGDTIHIIDSDGRKHKIRMAYIDAPEINQTYG TQSRNNLIDAALNKKAKVRVFEADRYQREVAQVSVGTIDLNLMQIQGGAAWHYESYAKKQ QSKTAYTDYSTAQKQAKEKRKGLWKKDNPQAPWQFRHQNHEQQNGNKKQSDKQWFGIW >gi|241320893|gb|ACQV01000009.1| GENE 86 85249 - 87744 1140 831 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 36 725 4 702 730 443 36 1e-123 MSTIKMNKNTKSLNLREKDPYLEREKQRYAHPLPSREWVIELLEQKGVPTKIEALAHELS ITEDEYEFFERRLKAMARDGQVLINRRGAVCAAEKLALVKCRVEAHKDGFGFAVPLTPTG EGDFVLYERQMRGVMHGDIVTVRPAGIDRRGRREGTVLDVVERAQSKVVGRFYMDRGVAI LEAEDKRLSQSIVLEPESVAHFKPQSGQVIVAEIETYPEAHRPAVAKLIEVLGDYADSGM EIEIAVRKHHLPHQFSEACVKAAKKIPDHVRKTDLKGRVDLRDLPLVTIDGETARDFDDA VFAEKVGRNYRLVVAIADVSHYVRPDDGIDVDAQERSTSVYFPRRVIPMLPEKLSNGICS LNPDVERLCMVCDMVITYAGNIKEYRFYPAVMRSHARLTYNQVWDWISDGQDHPFKQQID TLYQLFKILQKKRFERGAVEFESVETQMIFDDNGKIDKIVPVVRSDAHKLIEECMLAANV CAAEFLLKNKHTALFRNHLGPTPEKLATLREQLGLLGLSLGGGDNPTPKDYAALAEQFKN RPDAELLQVMMLRSMQQAVYEPHCDGHFGLAYSAYAHFTSPIRRYPDLTVHRAIKAVLNG QTYQPNKTWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFSGKISGMTSFGIF VTLDDIHIDGLVHISDLGEDYFNFRPEIMAIEGERSGVRFNMGDTVTVKVARADLDTSKI DLTLISGGSVGKKRGSRKAKPVSKPTAADKPVEKRKRKLSAKEIDEALAAPVKAKKGKVK SKPASKPAKPSKPKAASKKKAQAKTASVKAGGKNNAQGKSVKIKVKKAAKK >gi|241320893|gb|ACQV01000009.1| GENE 87 87827 - 88174 352 115 aa, chain + ## HITS:1 COG:NMB1239 KEGG:ns NR:ns ## COG: NMB1239 COG1393 # Protein_GI_number: 15677111 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis MC58 # 1 114 1 115 124 128 57.0 2e-30 MIKLYGIPNCDTVKKARSWLAENGIEFEFVDFKKNAPTAELINGWLKQVALEILLNKRGT TWRKLDKDAQESAATKEGAIALMVENPSIIKRPVLVKEGQVHVGFSVEVYQEIFG >gi|241320893|gb|ACQV01000009.1| GENE 88 88320 - 90173 2183 617 aa, chain + ## HITS:1 COG:NMB1238 KEGG:ns NR:ns ## COG: NMB1238 COG0760 # Protein_GI_number: 15677110 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 1 390 1 397 512 327 51.0 3e-89 MFHIVEKYKTPAQIVLGIIGLTFIGFGANNLSSPGSDYIVKVGDEKVSEHALQIAIQNEQ AAGNNAPSRDAIFQSLLQRAYLKQGAKLMGIAVSQEQIKQVIVDDPNFHDASGKFSQDLL KKYLDQRKMTEDQFVEDIREQFQLQNLLNLVQNGALVSDAQARQLINLTQATRTIRSFTF SPEAFAAQVKVDDAALQKYYEAHKKDYLIPQAVKLEYVALNIKDLADKQTVSAEEVQKAY DSKSVDLSPRAEIAHIFIPVMPNGDEASNAEIKAEVDKMAAELKAHPDAFAELAAKYSKD LSSSNKGGNLGYLSKSGGSGFGPEFDKAAFALGKGEVSDTIKSSLGYHVIKVLNVEAEPT LEQAKARIEAALKLKKAASAFNAAKEKLGEDTFNDPSSLAKAAANSGLKVENLDEWVTKA GAKEAGLPETLINAAFSDDVLKKKHNSEVIAINNETVWVIRAKEVREEKIAPFAEVKDTV RAAYLRSEATKLAEKKAQETLAALKTGKAADVQWSPVSQLSAQDARKTMSPEAYAALLKA RPVGGKPAYALLEGMPAPVIMEVQSVSAPENADSQIPAAKQALVQQLSANVFDNLLQYLG KKIDRTQGAQQVNNAAE >gi|241320893|gb|ACQV01000009.1| GENE 89 90256 - 90861 642 201 aa, chain + ## HITS:1 COG:NMB1237 KEGG:ns NR:ns ## COG: NMB1237 COG0353 # Protein_GI_number: 15677109 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis MC58 # 3 200 5 202 206 311 75.0 4e-85 MSKNPDAFVRLINALKILPNVGPKSAQRMAYQLLQYKREEAQELVDALQFALRQVQHCRM CNTFCEGDLCEICADEKREKSRLMIVHMPADVSSMEAANCHDGLYFVLMGQVSPAQGMDI SAVALDKLVARLQASDIEEIIIATNFTAEGDATAYVLAELFKNLPYKVSRLARGIPLGGE MEYVDAGTLAQAVYDRRNIQS >gi|241320893|gb|ACQV01000009.1| GENE 90 90924 - 91211 446 95 aa, chain - ## HITS:1 COG:no KEGG:NGK_1110 NR:ns ## KEGG: NGK_1110 # Name: not_defined # Def: putative periplasmic protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 95 1 92 92 92 65.0 3e-18 MNSKKFLALVSVAVGLSFSFNAYAAKEIKISSNNTAYSDADVQKLAATAVGMGVKEPVSL NSGNGVVTVSGSSATKCAFKVGNGDTPQIQGVSCK >gi|241320893|gb|ACQV01000009.1| GENE 91 91300 - 91419 67 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPHSFVKKGLLYRKTDRSSDCPTDVAFRDKAYVKPCIFP >gi|241320893|gb|ACQV01000009.1| GENE 92 91426 - 92676 1491 416 aa, chain + ## HITS:1 COG:NMA1403 KEGG:ns NR:ns ## COG: NMA1403 COG4591 # Protein_GI_number: 15794315 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Neisseria meningitidis Z2491 # 1 416 1 415 415 696 83.0 0 MASLETWIGLRYLRAKKRNGFMSFITMISIVGIALGVTALIVVLSVMNGFQKEIRGQLLN VAPHAEIGYYDVGSAPDWQNLREFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP SEEKNVVDYGKDMPAGSFDDLKPGEFDIILGQGLAEALGTEIGGKVTVITPEGNVTPAGV VPRLKQFNVVGVVKTGVYEVDNTLAMTHIKDAQVLYRLGENVGGLRLRLADPQNAPSFIA KLIPDAKKDEVWVRDWTFNNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK QADIAILRTLGLSPGGVMKIFLVQGAFAGFFGTLVGVVCGVLLGWNVGKIVAFFEDLFGV HLINSQVYFIDYLPSDVNLKDVAVIACISLGLAFIATLYPSWRAAKTQPAEALRYE >gi|241320893|gb|ACQV01000009.1| GENE 93 92669 - 93352 230 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 214 9 208 309 93 31 8e-18 MSKTILKCTGVGKSYNDGALNVQVLNHLDFEVAEAESVSIIGSSGSGKSTLLHLLGGLDM PSEGKVILMDQDLGGLSQKQLGELRNRYLGFVYQFHHLLPEFSALENVMMPLLIGKMPKA MAEEKAVKMLKKVGLDKRMLHRPSELSGGERQRAAIARALVNEPKCLLADEPTGNLDRKN AQNVLDMMLDLKRELNTSLIVVTHDDELAERFDRVMTMKDGSLQVLQ >gi|241320893|gb|ACQV01000009.1| GENE 94 93484 - 95247 1304 587 aa, chain + ## HITS:1 COG:NMA1401 KEGG:ns NR:ns ## COG: NMA1401 COG0507 # Protein_GI_number: 15794313 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Neisseria meningitidis Z2491 # 4 580 5 580 581 610 58.0 1e-174 MNPTNSILSSAADAAIAFFRRHEVQGASVIEPYVVRLFAALQNGHSFIYLDKEDIDALSN LPNLVGNADKPLILQGRKLFLGRMWQLEHDLAVEIKRLASAEAEEVNFMAASKSLSDWFD PKDSKEQRDAAALALLQNFMLITGGPGTGKTTTVAKLLGLICNNSTKLPRIALAAPTGKA AAHMARALQRALDGFDLSPSIKAHLENLEGQTVHRLLKLRPPQMRPAFNHEHPLALDVLV VDEASMLDLPLVLDLLRAVPTGCRLVLLGDENQLPSVGLGAVLAALSRPTALDKETAEKL EVYLPDHGFEIKGQPQALSQNNAKLTFSHRFGADSGIGCLARAVVSGEKQTAVEQFDKFP KELEMKSGRLKEQVALLYQKQQDYWQAVAENNVALAYGHAADVVVLAAWRQDADDLNQAY QEYLQRQGKVSGETPWFAGQIIMITHNDYMLEVFNGDIGLIMPNKESLNGLSAYFPEKDG FKKIAISRLPDFESAFAMTVHKSQGSEYREVWLLPPSVPATTESEEEARGLDKALLYTAI TRARERFVFWGNAEELCKAVECHQKRRTALADALKWQFEQPDEQASV >gi|241320893|gb|ACQV01000009.1| GENE 95 95344 - 96543 1526 399 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758892|ref|ZP_04757005.1| ## NR: gi|241758892|ref|ZP_04757005.1| hypothetical protein NEIFL0001_0943 [Neisseria flavescens SK114] # 1 399 1 399 399 768 100.0 0 MNNLYEIHNFVRFIEYFTFNTFFWRVGMKFQTKLIATCILLASSSYSLAENADGERDAAA SATTNDYVNSGSIIRKDDDKISIFNDLLTVNGGLRVRADAKDINANNSSINPTPEDTNAN FNAEFWLRAKLYKDWKLVAQIEPNIDLETGKFNGDHDVPVNKLYAEGTLYNNIKARVGKF GAFSSYGRVWDTEVTGGEIFFDNKTLPTKIYAGRRTGNLNDNTWGIGGRRRHFAAVQSML PVNENINVGATVSYMKDIDVRGAKKNAVFGEIGTDIKFNDDWHWMAAVSKSNIKAYNDAG QKIKNDGVFTEVRYKLADWSVRNSYDVFLNYRRVGSLSGVSSVEDYSKNVQGVQIGATYI PWKNWKFKGFYLAGKQVTPTVGTDKQDVNVIRGQLEYKF >gi|241320893|gb|ACQV01000009.1| GENE 96 96639 - 97013 302 124 aa, chain - ## HITS:1 COG:NMA1348 KEGG:ns NR:ns ## COG: NMA1348 COG1188 # Protein_GI_number: 15794270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Neisseria meningitidis Z2491 # 1 124 10 133 133 178 81.0 2e-45 MRLDKWLWAARFFKTRALAQKHIELGRVLVNGSKVKNSKNISAGDTIDMTLNSLPYKFKV AALNHQRRPAPEARLLYEEDMKTAAEREAQKQLDQASRISAAYPDGRPTKRDRRQLDRMK RDSW >gi|241320893|gb|ACQV01000009.1| GENE 97 97245 - 98204 1440 319 aa, chain + ## HITS:1 COG:NMA1349 KEGG:ns NR:ns ## COG: NMA1349 COG0825 # Protein_GI_number: 15794271 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 319 572 89.0 1e-163 MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIARLQKKSNELTKSIFSKLTPAQI SQVSRHPQRPYTLDYINGIFTDFEELHGDRHYSDDHAIVGGLARFNGQSVMVIGHQKGRD TKEKIRRNFGMPRPEGYRKALRLMKTAEKFNIPVMTFVDTPGAYPGIGAEERGQSEAIGR NLYELTRLHVPVLCTIIGEGGSGGALAVAVGDYVNMLQYSTYSVISPEGCASILWKTAEK AADAAQALGITAKRLQELDLIDKVIDEPLGGAHRDFETTMKNVKTVLEQQLSEAQSMTMP DLLSRRFDRIMAYGKFTDK >gi|241320893|gb|ACQV01000009.1| GENE 98 98293 - 99618 243 441 aa, chain + ## HITS:1 COG:NMA1350 KEGG:ns NR:ns ## COG: NMA1350 COG0037 # Protein_GI_number: 15794272 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 17 431 5 419 426 347 44.0 3e-95 MSQLSPDSLFKSFHAAFPDLPSHTVVEVGLSGGLDSVVLLHLLHRTREFHHFDLRAVHVH HGLSTNADSWAKFCQDYCRGLNVTLRVCRVNVEKQGKGLEAAARAARYQAFSDGLKKIIV LAHHRNDQIETFMLSAVRGGGLRGMAAMPVWRDLNEEIQIWRPLLAFSRQELAEYAQQWG LSFVEDESNEDSSYLRNWMRNQALPKWQQRIPNFEQQICTNVRLLQEDLQLLDELIESEY QRISPNGIFSISLWRQCTPLLRRRLLWYFLRKQTESLPSYHSIADFARVLETADQAQLNL PDGKLVVYRDKLFVCQESEFQKLPWCNGREVRGRLKDILLENGFVLLPFKGGLSEEELEK QAVFRNVAKGDVIQSGQREKSVEKLLQECHIVPFVRKYWPIILSMGNKCLAVINLRVGSD VQIGEGYLPVHEKLAKYIVEK >gi|241320893|gb|ACQV01000009.1| GENE 99 99838 - 100437 299 199 aa, chain + ## HITS:1 COG:RSc1055 KEGG:ns NR:ns ## COG: RSc1055 COG1595 # Protein_GI_number: 17545774 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Ralstonia solanacearum # 1 199 1 199 199 216 56.0 2e-56 MNDRQIDQVLVERAQKGDHKAFEMLMSKYQRRLNRLISRFIQDEHEVHDVTQEAMIRAYR ALVNFRGESAFYTWLYRIGINTAKNFLTTSGRQFFVSSEAANEEGDVLDLTDQIADYHTP EAEMMNREILQTVEASIAQLPDDMRQAITLREMDGLSYEEIARVVDCPIGTVRSRIFRAR ELIAKDLRPLLDTSEDQRW >gi|241320893|gb|ACQV01000009.1| GENE 100 100443 - 100991 634 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758888|ref|ZP_04757001.1| ## NR: gi|241758888|ref|ZP_04757001.1| putative anti-RNA polymerase sigma factor SigE [Neisseria flavescens SK114] # 1 182 1 182 182 261 100.0 1e-68 MNDKTNKALEYVSALMDGEALTDEMLDAVLADEEALRAWHEYHIIGDCIRQSAAASMAGE TMQSKAFTVPQTEAEGKQEKYAQREAANSGFFKFFAAAASVCAIAVAVWQFTPQTSRDAM PVAEKSNVQPAQDIIPVSGTSSDKAASEPGETVVPNAAKDGKIENRPTVRTEQQNEQQTV VQ >gi|241320893|gb|ACQV01000009.1| GENE 101 101109 - 101891 184 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 115 257 102 246 255 75 31 2e-12 MKLITSAQNEQLKHLFRLLTQAKARRESGETVLEGVHLLQTYLQSGGTPKQVYLPEKKQQ HLEIQEITAQLDEGLITWVGNEALSKITSLTDADDVMTWIDIPQQAGLPSDGDCVVLERV QDPGNAGTILRSAAAAGIRQIVCGNDSVDIWSPKVLRAGMGAHFLLSIFNRVELSAWMET YQHQIWATALGGRNIGLYEMDLSQSCAWVFGNEGSGVSETVKEKADACVKIPMLGQTESL NVAMAATVCLFEQMRQRIHA >gi|241320893|gb|ACQV01000009.1| GENE 102 101935 - 102594 889 219 aa, chain + ## HITS:1 COG:NMB1071 KEGG:ns NR:ns ## COG: NMB1071 COG3318 # Protein_GI_number: 15676955 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Neisseria meningitidis MC58 # 6 219 6 219 220 330 73.0 2e-90 MQILTFDEAARSRLMELLDDKSEAHNTMRCDEVQGFMMALLSGPDALNPTNWLPEILGEE SLFDAKERTEIERLVMAMAADMRMKLNEKILPDLWFYEDEAGNPDFYTWCNAYLYALDIV PTDWFEAVDQEEFEDLFYPIMALGGIYDDEENGEVILHLNEKELTQLESDLPHVLLDIYW YWQAIINKPQTVRREGEKVGRNDPCPCGSGKKYKACCGK >gi|241320893|gb|ACQV01000009.1| GENE 103 102656 - 103144 946 162 aa, chain - ## HITS:1 COG:NMB0932 KEGG:ns NR:ns ## COG: NMB0932 COG2839 # Protein_GI_number: 15676826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 162 1 162 162 122 53.0 3e-28 MTTILIILGLIAIVVGILGTIYPALPGLGLMFGGAWLLGYAGDYQVFGSGTLTFLAIVAV FGTAMDYVAGALGAKYTGASKTAVWGAFIGGIVGAFFSIPGLLLGPLTGAAIGEFIARKD TWQAGKVGIGTFIGFIIGTVAKIGCALTIALTILFVWLASFF >gi|241320893|gb|ACQV01000009.1| GENE 104 103304 - 104263 1410 319 aa, chain - ## HITS:1 COG:NMB1023 KEGG:ns NR:ns ## COG: NMB1023 COG0037 # Protein_GI_number: 15676911 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis MC58 # 1 318 1 318 319 637 98.0 0 MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSGGKDSYALLDILRQLQA SAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEEDTYSTVKRVLEEGKTTCSL CSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFYGGKLKAMPPKLVSDNGEHIV IRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRFPGRIESMFS ALQNVVPSHLADTELFDFVGLERGQSLKHGGDLAFDSEKMPERFSDGSEEDESEIKIEPQ KTERKVINILANKPKTCGM >gi|241320893|gb|ACQV01000009.1| GENE 105 104392 - 104745 553 117 aa, chain - ## HITS:1 COG:NMB1025 KEGG:ns NR:ns ## COG: NMB1025 COG0251 # Protein_GI_number: 15676913 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis MC58 # 1 115 1 114 120 155 70.0 2e-38 MDIRYLGASKRYSEAVVANGLVFLSGMVPENPEADAKAQTENVLAQIDSWLAQCQSDKAH ILEATIYLPDMNDYAAMNEAWDAWTAPERAPARACVEAKLASPDWKVEIKITALQIK >gi|241320893|gb|ACQV01000009.1| GENE 106 104845 - 105330 462 161 aa, chain + ## HITS:1 COG:NMA1462 KEGG:ns NR:ns ## COG: NMA1462 COG2606 # Protein_GI_number: 15794364 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 226 67.0 2e-59 MSKAEYPVTQAVRFLRSKKIDFVPYVYAYEEHGGTARFAECAGKPEHQVIKTIVLQDEHK KGLVVLMHGDKHISTRNLARELGLKHIEPATADQAAKWTGYLVGGTSPFGMKTALPVYVE ESIWALDEIFINGGKRGFIVGMKPENLRTLNPKDVHVAVDS >gi|241320893|gb|ACQV01000009.1| GENE 107 105346 - 105933 926 195 aa, chain + ## HITS:1 COG:NMA1461_2 KEGG:ns NR:ns ## COG: NMA1461_2 COG3671 # Protein_GI_number: 15794363 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 92 194 31 143 144 95 38.0 8e-20 MEQLNLYEILGVSQDADINVIREAYGKLVANPDIQKDAERFKAIGQAFEVLSHPEKRLAY DAAMQYERQETNTNNFTDMATNVVNAPSSDVKNYVFIAYVTYAVGLLILFTPVVGVIMAY VKRDEAQGSIYASHIDYLIKTFWVSLVGTVLGTFTTLILIGWLILLVTAIWFIYRVVIGL IKLNEDKPVSTQGWF >gi|241320893|gb|ACQV01000009.1| GENE 108 105937 - 106809 728 290 aa, chain + ## HITS:1 COG:no KEGG:NMA1460 NR:ns ## KEGG: NMA1460 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 290 1 290 291 358 75.0 1e-97 MAYLLASIVCSVLVSVLLKVARKQKINIEQAVAVNYIVAITLTMLVLKPDLSNPQVFLPT WWLFAALGILLPSVFVIMGKSVDAAGIVKSDAAQRLSLFLPIVASFTLFHEQLTEGRLIG LVLAFTALFFLLWKSDGGKKSGGFSTQVMLLLGVWCGYGVIDILFKQVAKSGTAFAGNLL VAFCLAGILMFGYLFAKGSKWTKEGIVGGMILGCLNFLNIVTYISAHQIMKDNPTLVFAG MNIGVIVLGTLIGAAIFKEKISSINAAGISVAICSIACLFYWPQIRSLVG >gi|241320893|gb|ACQV01000009.1| GENE 109 106970 - 107680 1044 236 aa, chain + ## HITS:1 COG:no KEGG:plu0311 NR:ns ## KEGG: plu0311 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 37 207 288 463 464 93 36.0 7e-18 MKHIKKHIQCAVLGMLVLSGCQSYQEDQSRRSKMAQFALNHPVAAQVIGMEDEGLINMTS NAARFAERSGLDDKANGDSRGTQVNAVRQALWQAAIASKFDSIIAEKAGNARLTDMELRE GKDDYFSRYLADQAVDQRNNRIGRSIGSAKPDRDMKTLAASILFYYNKVGLWTASEVNNR WYIKQEKLSDGQYAEALKNIAKLDQNGMTEQERSGYKTNTLSEIKRSVKAMRQVED >gi|241320893|gb|ACQV01000009.1| GENE 110 107713 - 108714 1134 333 aa, chain + ## HITS:1 COG:NMA1011 KEGG:ns NR:ns ## COG: NMA1011 COG0113 # Protein_GI_number: 15793967 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Neisseria meningitidis Z2491 # 1 333 6 338 338 580 90.0 1e-166 MNFPPRYVSNTRMRRMRKDDFSRRLMREHTLTADDLIYPVFVLEGQNQEEAVPSMPGVKR QSLDKLLFTAEEALKLGIPMLALFPVVTQNKTEFAEEAYNPEGLVPTVVRTLREKFPELG IMTDVALDPYTIHGQDGLTDENGYVLNDETIEVLVKQALCHADAGAQVIAPSDMMDGRIL AIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSSGNLGKADKKTYQMDPANTNEAL HEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVPTYAYQVSGEYAMLQAAIQNGWLDG EKTILESLLAFKRAGADGILTYYAIEAAKLLKK >gi|241320893|gb|ACQV01000009.1| GENE 111 108918 - 109901 1259 327 aa, chain - ## HITS:1 COG:NMA1378 KEGG:ns NR:ns ## COG: NMA1378 COG0320 # Protein_GI_number: 15794299 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Neisseria meningitidis Z2491 # 1 327 1 327 327 629 92.0 1e-180 MSEEVKNDPKRGIKLKGADKTARIPIKVVPLEQKLKKPEWIRAKLPGKKFFEIKNILREQ KMHTVCEEASCPNISECFTKGTATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPKHLAES VKSMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALEI LAETPPDVMNHNLETHPSLYKKARPGANYQHSLELLRRYKEMMPHIPTKSGIMVGLGETD EDVREIMRDMRANNIEMITIGQYLQPSDGHLPVLRYVTPDQFKVFEKEAYELGFTNAAIG AMVRSSYHADEQAAEALRETHGGCSHH >gi|241320893|gb|ACQV01000009.1| GENE 112 110031 - 110633 853 200 aa, chain - ## HITS:1 COG:NMB1217 KEGG:ns NR:ns ## COG: NMB1217 COG0321 # Protein_GI_number: 15677090 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Neisseria meningitidis MC58 # 18 199 1 182 190 336 89.0 1e-92 MKIVHKSLVDYLPTFEAMKAFNASRDENTEDELWVVEHPPVFTQGLAGKPEHLLIRDDIP VVQIDRGGQITYHGPGQLVVYTMINFKRRKTSVRHIVSALENSIIATLAEYGIEAAADPK RPGVYVGERKIASLGLRIKDGSVYHGLALNVNMDLSPFTHINPCGYAGMEMTQIADYVSP APSLAEVADKLTKHLQKELA >gi|241320893|gb|ACQV01000009.1| GENE 113 110633 - 110908 453 91 aa, chain - ## HITS:1 COG:NMA1380 KEGG:ns NR:ns ## COG: NMA1380 COG2921 # Protein_GI_number: 15794301 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 91 1 91 91 142 82.0 1e-34 MTDSTEKKSLIEFPCTFPLKVMGVVHPEFESAILETVRKHAPDTEPHHITTRPSSKGNYT GATVKVNVDNQEQLDNIYRDLTSHELVKVVL >gi|241320893|gb|ACQV01000009.1| GENE 114 111122 - 113581 3334 819 aa, chain + ## HITS:1 COG:NMA1398 KEGG:ns NR:ns ## COG: NMA1398 COG0466 # Protein_GI_number: 15794311 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Neisseria meningitidis Z2491 # 1 819 1 820 820 1354 87.0 0 MPTKDKYFEEYSALATLPLRDVVVYPHMVLPLFVGRPKSIAALEAAMANDDPVFLLAQLD PNTEDPKAEDLHQTGTVAQVLQVLKLPDGTVKVLVEGIRRARALTVDETGGLFLSHVEAI DENSDKDNPEIEALRRTLLTQFEQYAKLNKKIPAEVISTISSIDDNSRLADTIAAHLQLK LEQRQYVLETAGIVDRLEFLLAQLEAELDIMQVEKRIRGRVKRQMEKSQREYYLNEQVKA IQKELGEEDERGELDALENKIKEAGMSKEAEEKCLSELKKLKMMPPMSAESTVVRNYIDT LLELPWKKKSRVSKDIAKADLILNADHYGLEKVKERILEYLAVQKRMDKLKGPILCLVGP PGVGKTSLGESIAKATGRQYVRMALGGVRDESEIRGHRRTYIGSMPGKILQNMAKAGVKN PLFLLDEIDKMGSDFRGDPASALLEVLDPEQNNKFADHYAEVDYDLSDVMFIATSNSLNI PTPLLDRMEIIRLSGYTEDEKINIAMQYLVPKQMKRNGVKEGELVVDESAVRDIIRYYTR EAGVRSLDREIAKICRKVVMQVTLNEDKKKASKSKTVSKAKPKAIKVTEKNLHDYLGVRR FDYGVAESENRIGQVTGLAWTEVGGELLTVEAVALPGKGTIQCTGQLGDVMKESVSAAWS VVRSRAESVGLAPDFYEKKDIHVHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAM TGEITLRGEVLPIGGLKEKLLAALRGGIKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWI DEVLALGLETQPEQWAAELAVAETPQTSKAKSRTKATKH >gi|241320893|gb|ACQV01000009.1| GENE 115 113767 - 114036 581 89 aa, chain + ## HITS:1 COG:NMA1397 KEGG:ns NR:ns ## COG: NMA1397 COG0776 # Protein_GI_number: 15794310 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 128 95.0 3e-30 MNKSELIEAIAQEAGISKSAAQKALDATTNAVTNALKNGDTVTLVGFGTFYVGERAERQG RNPKTGEPLTIAAAKTPKFRAGKALKDAL >gi|241320893|gb|ACQV01000009.1| GENE 116 114383 - 114652 239 89 aa, chain + ## HITS:1 COG:no KEGG:Asuc_1013 NR:ns ## KEGG: Asuc_1013 # Name: not_defined # Def: FeoA family protein # Organism: A.succinogenes # Pathway: not_defined # 4 85 3 84 85 108 68.0 6e-23 MSTIPLSRLKKGAVVHIDSIAPNPVFGDLDTLVTRRLSDLGFSSGMPLQVIAVGGFGRGP FAVRLGNQSQFSLRLEEAGKIMCRIVEAV >gi|241320893|gb|ACQV01000009.1| GENE 117 114680 - 116548 2355 622 aa, chain + ## HITS:1 COG:RSp0251 KEGG:ns NR:ns ## COG: RSp0251 COG0370 # Protein_GI_number: 17548472 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Ralstonia solanacearum # 7 621 18 621 621 598 55.0 1e-170 MELSYFALIGAPNCGKTVLFNGLTGSHAKVANYPGVTVDKREGAFLDDEAVRIIDLPGTY SLRTTSPDEAVAKDVMVGKMGIPPDAIIAVADATNLRMTLRMILELKTLGLPMVVSLNLS DVARKRGLNIDAAKLSELLDAPVLETVAVSASGVQAVREAVAKLPRKRSFPANPASAERT LDALDSDKLYQEVESILAQVVRTQMTLPAWHKKLDDIVLHPVWGMIMLLVILFMVFQAVY TWAAPIMDAIEGGFAALGEWIGANMEPGILNDLLVNGVIAGLGSVLVFLPQITILFAFIL LLEDSGYLPRAAFLLDNIMAKSGLSGRSFIPLLSSFACAVPAVMSARTINDPRERLVTIA VAPLLTCSARLPVYALIIAAVIPDRTVGGIFNLQGLTLFILYIAGILSAALAAYIMKRLA RMKGNVQQFPLLMELPTFRTPNFKHIMTSLWDRVKAFLKRAGTIIFALAVVLWGLVSWPQ PPEGATGAAIDYSLAGTLGHAIQPLFAPLGFTWEMCIAMIPGIAAREVVVAALGTVYAVS ASSEDAVQNALIPIVHNNWGLPTAFAFLAWYVYAPMCAATLAVIKRETKSTKNMLMITGY LFLMAYFAAFVVYQLSSRILSS >gi|241320893|gb|ACQV01000009.1| GENE 118 116545 - 116673 170 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQYIIVGLIMLACVFFLLRKFVFKPKKRDCSSGCGKCGGCG >gi|241320893|gb|ACQV01000009.1| GENE 119 116864 - 117397 -227 177 aa, chain - ## HITS:1 COG:FN0945 KEGG:ns NR:ns ## COG: FN0945 COG0671 # Protein_GI_number: 19704280 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Fusobacterium nucleatum # 1 164 1 164 199 201 84.0 4e-52 MDKLSKLKIKYTIFISIFFVGFYKRAEFYTYTVDNVPSYFIDWERNIPFLPIFMLPYMTS PFFFLVTIFLEKNESSLKLLIKRATFLIGVSTALFVIFPMKFYFPKPEVDNQILKSFFYI LGKLDSSFNQCPSLHVSFAFLSAEVYCREFKSKFLKSFFGIWGFYSPFRSYLSINTI >gi|241320893|gb|ACQV01000009.1| GENE 120 117623 - 118276 720 217 aa, chain - ## HITS:1 COG:PA1573 KEGG:ns NR:ns ## COG: PA1573 COG3738 # Protein_GI_number: 15596770 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 51 215 29 196 198 218 57.0 9e-57 MKHKTAFKPIVISIVLSILLITTAVFFARHHNSIPSINTDFLQQEITEPEEPSPQIVQSA RNQIGKTLRYDPAYTKLTYPMGDVPMEKGVCTDVVIRALREQNIDLQELVHQDMSRNFSV YPKRWGLKQPDTNIDHRRVPNLMTYFTRQGWAVQDTNYQAGDIVTWELKGNRPHIGIVSD RKIGDRPLIIHNIGSGTREDDVLYRYTITGHFRLPVQ >gi|241320893|gb|ACQV01000009.1| GENE 121 118732 - 119739 692 335 aa, chain + ## HITS:1 COG:PA3913 KEGG:ns NR:ns ## COG: PA3913 COG0826 # Protein_GI_number: 15599108 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Pseudomonas aeruginosa # 6 335 2 331 331 413 59.0 1e-115 MPKIPELVCPAGNLPALKTAVDNGADTVYMGLKDATNARNFPGLNFDMKSAQEGVAYAHA RGRNVLMAINTFAQAGQIEQWHRAVDTAVQLGADAIIVADPAIMAYAAERHPNLRLHMSV QGSATNYEAINMMKELFGVRRAVLPRVLTVDQVKHVIDNTDVEIEVFGFGSLCVMVEGRC ILSSYATGESPNMQGVCSPAKAVRWEQLPDRMNVRLNQVLIDQYKPNEPAGYPTLCKGRF EVNDETYYALEEPTSLNVLEMLPELIKIGVSAIKIEGRQRSPMYTAQVTKSLRQALDAAA ADPAHFKVNPVWNNALSKVSEGHQTTLGAYSRPWK >gi|241320893|gb|ACQV01000009.1| GENE 122 119753 - 120670 1363 305 aa, chain + ## HITS:1 COG:RSp0969 KEGG:ns NR:ns ## COG: RSp0969 COG0826 # Protein_GI_number: 17549190 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Ralstonia solanacearum # 6 295 5 288 294 263 45.0 5e-70 MNPMKLSLGPVLFFWQKEALLEFYAAMLDAPVDTIYLGEVVCSRRQKMRFADWVSLAEDL AESGKEIILSSQVLLESESDLKRLRKITGQDKFKVEANDMGAVKLAREHGIPFVAGASLN IYNESTLALFQKLGAYRWIAPSELSRDKVAEIIKASDDIETELFAWGKMPLAYSSRCFTA RHYNLNKDGCEFRCLDYEQGMDMNTREGKPFLTINGIQTMSYGCQNLLPHHKDLRQIGVN MLRLSPQMHGMAEIVRIHRDVLDGKTALADALPELERLTTGTLVDGYWHGQPGIEAVKEE YYGVA >gi|241320893|gb|ACQV01000009.1| GENE 123 120657 - 121097 455 146 aa, chain + ## HITS:1 COG:VC0654 KEGG:ns NR:ns ## COG: VC0654 COG3154 # Protein_GI_number: 15640674 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Vibrio cholerae # 19 146 24 154 175 76 35.0 2e-14 MALPEIVLPAWAGKIGGKLPGRPPRFALVFALNTMLKRGLLPADMSLFDGRTFEIDVLDA GIKVRFTANAEKFIDADFLGTPDLRLAANGIDFMRMMMREEDPDTLFFNRKLQIEGDTEL GLITKNLLDSVDWPFGDWFLKRQLSD >gi|241320893|gb|ACQV01000009.1| GENE 124 121360 - 122736 1665 458 aa, chain - ## HITS:1 COG:NMA1356 KEGG:ns NR:ns ## COG: NMA1356 COG0773 # Protein_GI_number: 15794277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 458 1 458 458 892 94.0 0 MKHIHIIGIGGTFMGGVAAIAKEAGFKVSGCDAKMYPPMSTQLEALGIGVHEGFDAAQLD EFKADIYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVLHQHWVLGVAGTHGKTTTA SMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPNSKSPFFVIEADEYDTAFFDK RSKFVHYRPRTAILNNLEFDHADIFADLGAIQTQFHHLVRTVPSEGLIVCNGQQQSLQDT LDKGCWTPVEKFGTEHGWQVGGVNVDGSFDVLLDGKKAGHVAWDLMGGHNRMNALAVIAA ARHAGVDIQTACEALSAFKNVKRRMEIKGTVNGITVYDDFAHHPTAIETTIEGLRQRVGN ARILAVLEPRSNTMKLGTMKAALPASLNDADQVFCYAGGVDWDVAEALAPLGGKLHVGKD FDTFVAEIVKNAEAGDHILVMSNGGFGGIHGKLLEALK >gi|241320893|gb|ACQV01000009.1| GENE 125 122906 - 123280 189 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298368985|ref|ZP_06980303.1| ## NR: gi|298368985|ref|ZP_06980303.1| glycine betaine transporter [Neisseria sp. oral taxon 014 str. F0314] # 1 68 251 318 520 135 95.0 1e-30 MGAVLPIEKGMKWLGDMTVVLSLLMLVFVFLVDPTHYFLSNLVVSIGNILTQTVHHSFEL YLFHNRDWSNGLLGMVDYLGTICGRVLSENFQRPYFARIRAGIHYGTSRLPRDLVLRILR LQPA >gi|241320893|gb|ACQV01000009.1| GENE 126 123114 - 123437 426 107 aa, chain + ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 1 103 318 420 661 80 39.0 7e-16 MAYWVWWITWAPFVGVFLAKISKGRTLREFVLASIMVPVGFLVIWFSVFSGFSLLDTVEG TGCLAEIVNKGDYEGTFYYLLNMLPLSFATKPLTVILFLGFVVLVCL >gi|241320893|gb|ACQV01000009.1| GENE 127 123408 - 124526 815 372 aa, chain - ## HITS:1 COG:SA0341 KEGG:ns NR:ns ## COG: SA0341 COG4292 # Protein_GI_number: 15926054 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 3 302 10 316 377 116 27.0 6e-26 MPVGEKKVGLPELFYDLVFVYALSRTTELVHHADEADYVTFLISLVILFTVWLYQSIYIN RFGDNPWRDRLFLFADMFLLLFLSNAVGSDWLANFVPFNLALGLLVGSVCLQYLLQLARH ASPEQRRRIKLVAGLRGLTAATVLGSLLFPAHIGQWVALGGFGLGWILSTFVSHKQPAVN FPHLLERLNGLVIIFFGETVIDIAPYFHVAKFEIGVLPVIVILFAMFTVYVMQFSYFIDE HKAQNSGALPSYSHYAVLIGIALTTVALAWLHQNSTATAESVRMLWLGLGVFYLGVAANT PYNKPEHRRPQRLWIFQTTLFVIGAGLAAVLPPQPLVILTTTALMTAVIAMATVYFERRT RQLSQTNQNHET >gi|241320893|gb|ACQV01000009.1| GENE 128 124601 - 125287 805 228 aa, chain - ## HITS:1 COG:YPO2806 KEGG:ns NR:ns ## COG: YPO2806 COG0667 # Protein_GI_number: 16123004 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 2 223 93 314 329 218 48.0 7e-57 MENVLDSRPESIRKQVDESLRNLQTDYIDLYYQHRIDPNVPAEAVAEVMGELIKAGKIHH WGVSNTPIEYMVAAHAVTPITATENQYSMVFRTPEKALFAFCEANHIGFVAYSPLGNGFL SGRFNAQTQYAEGDFRRTMKRFSADVMTKNQPVLDLLHELAAAKSATAAHIVLAWELAQM PFIVPIPGTTKKHRLAENLGALRIRLTADELHAINQKLGKMDIDESYF >gi|241320893|gb|ACQV01000009.1| GENE 129 125300 - 125527 184 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758862|ref|ZP_04756975.1| ## NR: gi|241758862|ref|ZP_04756975.1| putative acyltransferase [Neisseria flavescens SK114] # 1 75 1 75 75 140 100.0 2e-32 MSLPHNADPTVGDNSTVVNFAFAPTSVGGLGINYTITPEGWLYTVSHTQEQQEKVNIFVN ALKVGGKNLLEFLNA >gi|241320893|gb|ACQV01000009.1| GENE 130 125783 - 126121 570 112 aa, chain - ## HITS:1 COG:NMB1995 KEGG:ns NR:ns ## COG: NMB1995 COG0347 # Protein_GI_number: 15677823 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Neisseria meningitidis MC58 # 1 112 1 112 112 172 86.0 9e-44 MKKIEAIIKPFKLDDVREILTEIGITGMTVSEVKGFGRQKGHTEIYRGAEYAVDFLPKVK IELVLADDKVDQAVDAILETAHSGKIGDGKIFIYPVEEAIRIRTGERSEAAL >gi|241320893|gb|ACQV01000009.1| GENE 131 126211 - 127995 679 594 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 116 581 2 451 458 266 34 7e-70 MSLIELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVK VKVGDKISEGGLIVVVEAEGAASAPKAEAPAAPAQEAPKAAAPAPQAAQFGGSADAEYDV VVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHL AANGIKYPEPELDIDMLRGYKDGVVSRLTTGLAGMAKGRKVDIIQGDGQFLDPHHLEVSL TTSEVYEQATPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLL IIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMINTKT VAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD KQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTSPEVA WVGETELSAKASGRKITKANFPWAASGRAIANGCDNGFTKLIFDAETGRIIGGGIVGPNG GDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGVCTDLPAQKKK >gi|241320893|gb|ACQV01000009.1| GENE 132 128074 - 129672 2624 532 aa, chain - ## HITS:1 COG:NMA1555 KEGG:ns NR:ns ## COG: NMA1555 COG0508 # Protein_GI_number: 15794448 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 532 1 535 535 790 91.0 0 MSIVEIKVPDIGGHENVDIIAVEVKVGDTIAVDDTLITLETDKATMDVPADAAGVVKEVK VKVGDKISEGGVILTVETGAAAADAAPAPEAEAPAAPVAAPAAAPAGGATVQVVVPDIGG HSDVDVIAVEVKVGDTVAVDDTLITLETDKATMDVPCTEAGVVKAVFLKVGDKVSEGSAI IEVETAGSAAAAPAPATQAAAPAPAAAPAPTAPAAAPAPTAAKIDEAAFAKAHAGPSARK LARELGVDLGQVKGTGLKGRIMGEDVKAFVKSVMQSGAGKPAAASLGGGLDLLPWPKVDF SKFGSVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEFRKQLNKEWEREGVK LSPLAFIIKASVAALKAFPEFNASLDGDNLVLKNYFNIGFAADTPNGLVVPVIKDVDQKG LKQISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTGFTPIVNAPEVAILGVCKS QIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFLANLLKDFRRITL >gi|241320893|gb|ACQV01000009.1| GENE 133 129817 - 132480 3587 887 aa, chain - ## HITS:1 COG:NMB1341 KEGG:ns NR:ns ## COG: NMB1341 COG2609 # Protein_GI_number: 15677207 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Neisseria meningitidis MC58 # 1 887 1 887 887 1771 96.0 0 MSTQLHDVDPIETKEWLDALSSVLEYEGSERAQYLLESLVKYSRDKGIRMPHGTTTPYLN TVSVEDEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLELGGHIASFQSAATMYEVGF NHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQLNNFRQEVDGKGLPSYPHPH LLPDFWQFPTVSMGLGPLMAIYQARFLKYLESRGLAKTKGRKVWVFCGDGEMDEPESQGA IALASREGLDNLVFVINCNLQRLDGPVRGNGKIIQELEGNFAGAGWNVVKVIWGRRWDRL LAKDKDGILRKRMEECLDGDYQTYKSKDGAYVREHFFNTPELKALVADMTDDEIWALNRG GHDPQKVYNAYDRAANHANGKPTVILAKTIKGYGMGASGEGQNVAHQAKKMDKASLKQFR DRFDIPVTDEQIDSGDLPYLTFAPDSEEYKYLHARRESLGGYLPKRNPTQDVLEVPELSA FDAQLKSSGDREFSTTMAFVRILSTLLKDKKIGKRVVPIVPDESRTFGMEGMFRQYGIWN PKGQQYTPQDKDQLMFYKESVDGQILQEGINEPGAMADWIAAATSYANNNFAMIPFYIYY SMFGFQRVGDLAWAAGDMHARGFLLGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYD PTFQYEVAVIVQDGLRRMYANNEDVFYYITLMNENYAHPDMPEGVEQDILKGMYLLKAGG KGDKKVQLMGSGTILQEVIAGAELLKADFGVEADIWSCPSFNLLHRDAIEAERFNRLNPL ETAKVPFVTSQLQGHDGPVIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRS FFEVDRYNVAVAALSALAEQGKVSKETVQQAIEKYGIKADSAPSWKR >gi|241320893|gb|ACQV01000009.1| GENE 134 133101 - 134528 1547 475 aa, chain - ## HITS:1 COG:NMB1327 KEGG:ns NR:ns ## COG: NMB1327 COG0790 # Protein_GI_number: 15677193 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis MC58 # 13 466 11 464 467 390 52.0 1e-108 MNAQQYEESFLLAEKLITQDPPDFAQAIPLLCEAAEAGHIEAAFQLAGCLFENHENEQDL AIAVEYLKQAARAGHPYARYNLLQLQENNGAEVETLISAYQELAEEGLAPAQLRLMRLYA DNGNDQEAVKWALKAAEQQNPQAQYFLAQHYQYSSSPDLEYSHKLYQQSAAHGFIAAHWQ LGLQYKLGQGVAQNPEKAIEHLRIAADYDIVPAQTSLAELLVASNPAEALEWFEKAAEKG DSNAHVALAEIYLLGKNTERDPQKAYQHAKFAADQNDPEGLRLLGDIYRYGLGQAVDADT ARQYYQRSADLGNLVAYQKLLSDSALNNQQNYELTKEIALQRQEAERLYKLAFAAHYGLK RQQNYAEALDLYHQSAERGHSKSQTNLGMMYYSGQGVPVDYAQAAKWFEAAAKQRDTMAQ YNLACLYYHGMGVEKDINNACFWLQEAIQHGHEQQDVLKELLAQWKQFAQKGSAD >gi|241320893|gb|ACQV01000009.1| GENE 135 134753 - 135040 214 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56478165|ref|YP_159754.1| RNA-binding protein [Aromatoleum aromaticum EbN1] # 14 94 12 92 156 87 48 6e-16 MSDNKLSTKEILALKAQAHHLHPVVMVGQQGLTDSVIKETNAALTAHELIKVRVFGDDRA ERIEICNALCETLGAQLVQHIGKLLVLWRKKPDDE >gi|241320893|gb|ACQV01000009.1| GENE 136 135152 - 135772 336 206 aa, chain + ## HITS:1 COG:NMA1008 KEGG:ns NR:ns ## COG: NMA1008 COG0293 # Protein_GI_number: 15793964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 206 388 92.0 1e-108 MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINQKDKLIKPGTVLADLGSAP GSWSQVAAKLVGKTGAVFALDILPMDAIEGVSFIQGDFREDAVLEQFEALLDNRPLDLVI CDMAPNMSGNAVTDQARSFYLCELALDFAFQHLKTGGSFLVKVFQGAGYQEYTAAMREIF ASVQTRKPDASRNRSSEIYLLGKNKR >gi|241320893|gb|ACQV01000009.1| GENE 137 135843 - 137804 1565 653 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 623 1 624 636 607 51 1e-172 MGNTIKNILVWVVGGAMLLAAFNALSDKQEDKQQIEYSQFIQQVNSGEVSNVNIEGSVVS GYLIKGERTDKTSFYTNAPLDDNLVKTLLDNKVRVKVTPEEKPSMLASLFYSLLPVLLLI GAWFYFMRMQSGGGGKGGAFSFGKSRARLLDKDSNKVTFADVAGCDEAKEEVQEIVDYLK SPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAGVPFFSISGSDFVEMFVGVGASR VRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFESNQTVI VIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRGREQILKVHAKKVPLDASVDLTSLARG TPGFSGADLANLVNEAALFAGRRNKVKVDQSDFEDAKDKIYMGPERRSMVMHEDEKRATA YHEAGHAIVAESLPFTDPVHKVTIMPRGRALGLTWQLPERDRISMYKDQMLSQLSILFGG RIAEDIFVGRISTGASNDFERATQMAREMVTRYGMSDKMGVMVYAENEGEVFLGRSVTRS QNISEKTQQDIDAEIRRILDEQYQVAYKILDENRDKMETMCKALMDWETIDRDQVLEIMA GKQPSPPKDYSHNVRDDKVEEPEAPVAEAVEPVEQNEVQNTEPVEADKTDKSV >gi|241320893|gb|ACQV01000009.1| GENE 138 137908 - 138402 649 164 aa, chain - ## HITS:1 COG:YPO2342 KEGG:ns NR:ns ## COG: YPO2342 COG2077 # Protein_GI_number: 16122566 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Yersinia pestis # 4 164 5 166 167 210 68.0 8e-55 MAQVTFQGSPISTNGNLPAIGQVAPDFTLVAADLSEKSLADFAGKRKVLNIFPSIDTGVC AQSVRTFNKRASSLDNTVVLCISADLPFAQARFCGAEGLENVVTLSTFRSSFSNDYGVTL TESPLRGLTARAVVVLNEQNQVLHAELVSEIANEPDYEAALAVL >gi|241320893|gb|ACQV01000009.1| GENE 139 138446 - 138985 720 179 aa, chain - ## HITS:1 COG:no KEGG:NMB1470 NR:ns ## KEGG: NMB1470 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 179 2 181 181 234 67.0 1e-60 MKKTFPLILLSLSLAACGGKSEDTAANDAASGKAPKPTFKVKYIDEQAIAGLDLGTAQEG ETKEGKKQRTYPINGIEGGVINLIGKHPTDLEVISGQCMEKNEKGVSAGWSANGVCHTTF AKMVDNIAQDGSKLTDYLISHAALQPYTEGKSGYAAVQNGRYILEIDSEGMFYFRRRHY >gi|241320893|gb|ACQV01000009.1| GENE 140 139066 - 140076 1401 336 aa, chain - ## HITS:1 COG:NMA1682 KEGG:ns NR:ns ## COG: NMA1682 COG0180 # Protein_GI_number: 15794575 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 336 1 336 336 645 94.0 0 MSKKRVLTGVTTTGIPHLGNYVGAIRPAIRAAQDSNTESFLFLADYHGIIKCHEPEMIHQ STQAVAATWLACGLNPEQTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQTNT ENGQDDPDHGVEMGLYSYPILMTADILMFNAHEVPVGRDQIQHVEMARDIAGRFNHRFQE LFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQ PDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLSAKINAELAEPRKRYNELTAK PSQIEDILQSGAQKARKEARELLDKVRDAVGIRPLK >gi|241320893|gb|ACQV01000009.1| GENE 141 140335 - 141168 423 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 266 1 274 815 167 37 1e-180 MRFDKLTAKFQQALQEGQSLALAADSSYLEAGFILKALLDDQNSGAAALLAHAGVNVPQV KQHLQQHLSSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRDDAYIASELFLLALVQQND ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPV IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL DLAALIAGAKYRGEFEERLKGVLNDLAKDDGKHFDFH >gi|241320893|gb|ACQV01000009.1| GENE 142 141134 - 142909 1254 591 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 587 274 806 815 487 45 1e-180 LKTMANTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKD AALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFL PDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDE EIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGEL PKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEE VLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFD SEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHP DVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKEVVMEDV KEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLKVDDAALDLIAK AGFDPVYGARPLKRAIQSEIENTLAKALLEGKYAPDSIIHVKEEGGKLLFA >gi|241320893|gb|ACQV01000009.1| GENE 143 143142 - 145130 1568 662 aa, chain + ## HITS:1 COG:NMA1485 KEGG:ns NR:ns ## COG: NMA1485 COG4389 # Protein_GI_number: 15794385 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase # Organism: Neisseria meningitidis Z2491 # 1 652 4 655 668 1049 78.0 0 MQKLTNQNLHIILSERLNDTDFVLILNALIKFLRRGGKKQASERFDLILSTLKQDDALCR QFSLRFYAWLSKVHIYPALIKLGIFSRHSFTREMGIRIYERFSPSYKDFSNLREVFLYLF HSKNDDKWLQTLSLRQWLSMYELLQGKADPALLQTASRQLADARLRAVEMLSIWIASEAI EPDLIRIAPRLLEADSAFVALQREIAKLVEHYRHSEETYDTAHLEVMFDQCDKQIEYLRR RGTGAGSGSSVKVAHLLERLQQTIDRLKLLTNIQIKTGSRTRLTINLMNAMIYAAVEQYS TSHLRKSSIRMLARSITENKSHHGEHYITRNRSEYFKMFYSAAGGGVIIALMALNKIHIA SLGFSEFTTSFLAGLNYGLGFMLIHMLHCTVATKQPAMTAASFAEQVDSNEGSKAVDNKL AKLLIDVCRSQSVAVFGNVSIAVLLAAGIAWGYAYTHGQPLLNEAVTAYQLKSIEIFTQP TLWYAAIAGVWLFCSGIIAGFFDNRSDYLNLRQRLPFNPFLRKIMRPQPRRRLAAYIHKH YGSLMGNFIFGMLLGMTGYFGHLFGLPLDIRHVAFSSANLGYAAISGHADIFTFMLGLVS VLAIGMVNLVVSFSLALAVALRSRGTRLGSMRNLLKSFWSQVKANPLILLYPVQVNNKEN TK >gi|241320893|gb|ACQV01000009.1| GENE 144 145196 - 145816 896 206 aa, chain - ## HITS:1 COG:NMA1525 KEGG:ns NR:ns ## COG: NMA1525 COG0740 # Protein_GI_number: 15794419 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Neisseria meningitidis Z2491 # 1 205 1 203 204 387 95.0 1e-107 MSFDFNNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESE NPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPHVSTLCLGQAASMGAFLLSAGEKGKRFA LPNSRIMIHQPLISGGLAGQASDIEIHAKELLKIKEKLNRLLAKHCDRDLADLERDTDRD NYMSADEAKEYGLIDQVLENRASLQA >gi|241320893|gb|ACQV01000009.1| GENE 145 145906 - 147216 1979 436 aa, chain - ## HITS:1 COG:NMA1526 KEGG:ns NR:ns ## COG: NMA1526 COG0544 # Protein_GI_number: 15794420 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Neisseria meningitidis Z2491 # 1 436 2 437 437 722 93.0 0 MSVTVETLENLERKVVLSLPWSKINAETEKKLKQTQRRAKVDGFRPGKAPFKMIAQMYGA SAQNDVINELVQREFYEVAVAQELKVAGYPRFEGIEEQDDQESFKVAAIFEVFPEVTIGD LSAQEVEKVTATVGDAEVDQTVEILRKQRTRFNHVDREAQNGDRVIIDFEGKIDGEPFAG GASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSAVFTITLNN VSEATLPEVDADFAKALGIEDGDVAKMREEVKKNVGREVERRIGEQTKESVMNALLKAAD LQVPVALVNEEAARLANEMKQNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVE ENKLEPTEDQIKAVVANFAESYEDPQEVIDWYYAEPSRLQGPTSLAVESNVVDFVLSKAK VTEKALSFDEVMGAQA >gi|241320893|gb|ACQV01000009.1| GENE 146 147409 - 149853 2934 814 aa, chain - ## HITS:1 COG:NMB1314 KEGG:ns NR:ns ## COG: NMB1314 COG1674 # Protein_GI_number: 15677180 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis MC58 # 1 814 1 812 812 1234 79.0 0 MTAKSSKTQTKKRISNKPAAKPTTRKSTKAQTLADNKVSQRLKAAKELQKNEEKKARPEH VVNLINDALWLFGLVITIYLAISLASFSMDDPAWSRSVPKSNDVANLGGLFGSYLSDVGY YLFGLSFWWWIAASCVFLYKNFRPMKKQENHKPYNHGVAALALFLLLVCSPIIEHFLFDN ALSESLPVGAGGLVGLLAGSGLAWLLGKSGSLLIMLVMLLLSISLLAQVSWLEVMAKSGS HMGGLFGSLMKKLSQFQNKKEDVHSEALETQNTRRMVKEAKTITATPVAPLAGSSSNRKT VAVSVAPPPKIQTSLFDDTEPKNNGEYHKPNINLLRMPSEEPVAVNPDELQQTAELIEAK LAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQIVALSKDLARSMSLQAVRIVETIAGK NTMGIELPNEKRQDVMLSEILSSPVFTDAKSKLTVALGKDIAGTPVVGDLAKMPHLLVAG MTGSGKSVGVNGMIMSMLFKATPDEVRFIMIDPKMLELSIYDGIPHLLCPVVTDMREAGQ ALNWCVAEMEKRYRLLSHAGVRNLDGFNQKVEQAKAAGKPLLNPFSLNPDDPEPLEKLPL IVVVIDELADLMMTERKSVEQQIARLAQKARAAGIHMIVATQRPSVDVVTGLIKANIPTR MAFTVQSKIDSRTILDQMGADELLKYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNFVK EQAPTNYVEGLLSGEAAIETTNIVNPNANSDELFDQAVAFVLESRKTSISALQRQLRIGY NRAANLIDALENAGVLSPADINGSRRILAQKDQL >gi|241320893|gb|ACQV01000009.1| GENE 147 150042 - 150593 470 183 aa, chain - ## HITS:1 COG:no KEGG:NMB1225 NR:ns ## KEGG: NMB1225 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 3 183 4 171 171 121 50.0 1e-26 MKKYLLTLSLLPLAVFNSQAHAAKIYTCEVNGSIVYTSRPSGNCQAVNDLPIVGKYSSSR YDAPVSDTPTLNAPTSQTAPAKSKNTAAKSNHKATPKPAPVRTASETAPSPLPKSSGVNS RRSILETELSNERAALADAKKQLSQARTAKGGSVNQQAISTLQGAVLDREKNIQALQREL GRM >gi|241320893|gb|ACQV01000009.1| GENE 148 150630 - 150983 351 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758874|ref|ZP_04756987.1| ## NR: gi|241758874|ref|ZP_04756987.1| putative lipoprotein [Neisseria flavescens SK114] # 1 117 1 117 117 161 100.0 1e-38 MTSIIKQAGYFLVSSFLLGISLHAAAAVYSCGNGSYTSEPKSSCAQAELPKISGHQGSGY HLNIRSLNASDERASAKPKKKARAEKSDKQEKKADKPSKNKNSAKTKKQQPMPSEQE >gi|241320893|gb|ACQV01000009.1| GENE 149 151031 - 152950 2480 639 aa, chain - ## HITS:1 COG:NMB1226 KEGG:ns NR:ns ## COG: NMB1226 COG0488 # Protein_GI_number: 15677098 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 639 1 639 640 1063 90.0 0 MIEIKKLTLQRGLKVLLDKADAVINPGQRVGLIGKNGTGKSSLFALIKGEITQDGGEILI PKTWRLASVSQETPDLDISALDYVLQGDAELQAFQTALVQAEAQNDGMKQAEYHAKLEEI DAYTAPARAAKLLNGLGFSQEEHTRPVKSFSGGWRMRLNLAQALICRADLLLLDEPTNHL DLETVLWLENHLASLPCTQIIISHDRDFLNATTTQTIELSQQKLTQYGGNYDFYQAERAQ RLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQAQSRMKALAKLERIAPAHLDSEFSF EFANPTHLPNPLLKLDHADLGYGDNTVLHNITLSLESGARYGLLGVNGSGKSTFIKALAG KIDLLSGSIVRSEKLNIGYFAQHQLDTLRADQSPVWHIQQLSPEVREQEIRNFLGGFNFV GDMAVQKTEPFSGGEKARLALAMIIWQKPNLLLLDEPTNHLDLDMRHALTLALQSFQGAL IVVSHDRSLLEATTDSFLLIDKGRLNNFDGDLNDYRQWRLAQENAAAAPAASAQSQSRKD TKRIEAQIRQEKAKRSKPIQQKIDKAEKEIARLTDIQTACEAFLAQESAYSEENKPKLQE TLAQLTETKVKLTQLEENWLQWQEELEQIQVNVEAEFSQ >gi|241320893|gb|ACQV01000009.1| GENE 150 153122 - 153889 677 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 246 1 242 245 265 54 1e-69 MIKIRNIHKTFGENTILRGIDLDVGKGQVIVILGPSGSGKTTFLRCLNALEMPEQGQIEF NNAQPLSIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGSVAVQGKPVAKA REEAVKLLEKVGLGDKIDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVQ DVLDTMKELAQEGWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPQDLFNHPKHERTQ KFLRQIRADNTDLQI >gi|241320893|gb|ACQV01000009.1| GENE 151 153899 - 154615 956 238 aa, chain - ## HITS:1 COG:NMA0999 KEGG:ns NR:ns ## COG: NMA0999 COG0765 # Protein_GI_number: 15793955 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 238 1 238 238 400 95.0 1e-111 MLNNFLASLPFMTETRADMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMP SGGIFQKCLLKLVEFYISVIRGTPLLVQLVIVFYGLPSIGIYIDPIPAAIIGFSLNVGAY ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK >gi|241320893|gb|ACQV01000009.1| GENE 152 154605 - 155429 1528 274 aa, chain - ## HITS:1 COG:NMA0997 KEGG:ns NR:ns ## COG: NMA0997 COG0834 # Protein_GI_number: 15793954 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis Z2491 # 1 274 2 275 275 431 89.0 1e-121 MLKKFVLGTIAAVVLAACGGEGSNSASSAPAQSGAASGSLIERINNKGTITVGTEGTYAP FTYHDKDGKLTGYDVEVTRAVADKLGIKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSP ERQATFDKSEPYSWSGAVLVVRKDSNIKSIDDIKGVKTAQSLTSNYGEKAKAAGAELVPV DGLAQSLTLIEQKRADATLNDELAVLDYLKNKPDAGVKIVWSAPADEKVGSGLIVNKGND EALAKFSTAMTELKADGTLKKLGEQFFGKDISVK >gi|241320893|gb|ACQV01000009.1| GENE 153 155584 - 157494 2786 636 aa, chain - ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 28 633 11 640 644 464 42.0 1e-130 MLTQTQQVDLTLHHLKERTLSIYTPEQRASIETSEDWKQFDRRLEEHFPKLMHELDNVYN NNEAVLPMLEQLIAQAWQNYSQRNSSLKDIDIARENDPDWILSNKQVGGVCYVDLFAGDL QGLKAKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIDDLRDVIAAL HEAGISAVVDFIFNHTSNEHEWAKGCAAGDPLYDNFYYIFPDRWMPDQYDRTLREIFPDQ HPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMMFLANLGVDILRMDAVAFIW KQMGTDCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVVQYISQDECQIGYNPL QMALLWNTLATREVNLLHQALTYRHNLPDHTAWVNYVRSHDDIGWTFADEDASQFGIHGY DHRQFLNRFFVNHFDGSFARGVPFQYNPNTGDCRVSGTAAALVGLAQNDPYAVDRIKLLY SIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEELYNQRHDSSTTAG QIFQGLRHMISIRQSNPRFNGGRLVTFNTNNKHIIGYMRNNALLAFGNFSEHAQTINAHT LQAMPFKAHDLISGQTVSLNQDLVLQPYQVMWLEIA >gi|241320893|gb|ACQV01000009.1| GENE 154 158162 - 158941 798 259 aa, chain + ## HITS:1 COG:NMB1436 KEGG:ns NR:ns ## COG: NMB1436 COG0247 # Protein_GI_number: 15677294 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Neisseria meningitidis MC58 # 1 259 1 259 259 506 91.0 1e-143 MSAIKPPQITVFDSKPTDAYFFGTCVLDLFMPEAGMDAITLIEQQGIRIHYPMEQSCCGQ PAYSSGHPKEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHHWPILFKGTEYEQKAIDCA NRIIEFTHFLLAIGYKPEDKGELVKVAVHTSCAARREMNVHLSGWQLIDGMENVERIVHD HESECCGFGGTFSVKQADISGAMVTDKVAALKETGATEIISADCGCMMNIGGKIAKDEPN MPRPKHIASFLLERTGGKA >gi|241320893|gb|ACQV01000009.1| GENE 155 158938 - 159639 771 233 aa, chain + ## HITS:1 COG:NMB1437 KEGG:ns NR:ns ## COG: NMB1437 COG1556 # Protein_GI_number: 15677295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 233 1 233 233 422 87.0 1e-118 MSARENILAKLKKADALRMEEPPVFDYYREMGVSWANDVERLKHWAAAMRAVKTEIYWVT KTNWPQVFRQAAEGKGLKNILLPLETEHGQLARSALADTNIEPRGFERKIDDWKNEFFTD IEAGFSGSKCGIARTGTIMLESSPVEPRSLSLVPPVHFCLFDTSKMYNEFHNAVEGEKLV EKGMPTNVILISGPSKTADIQLTLAYGAHGPRDLVVLAVLPDHISPADLEEKA >gi|241320893|gb|ACQV01000009.1| GENE 156 159636 - 161087 1604 483 aa, chain + ## HITS:1 COG:NMA1650 KEGG:ns NR:ns ## COG: NMA1650 COG1139 # Protein_GI_number: 15794544 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Neisseria meningitidis Z2491 # 1 483 1 484 484 936 95.0 0 MSSQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRKAVLTDEEELQSLRDLC EHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACQIIHNIITDKNGKLMVKGKSM VSEEIELNHYLQDQGIKAVESDLGEFIVQMAGEKPTHIVMPAIHKTKEQVSELFHQNLGT PLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAETGTLCLVENEGNGRLSTTVPPVH IAITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYFNMITGPRRSEELDGPQEMHLVLLD NGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRIGGAAYGTTYPGPIGEIISPHLLGLDA TRDLPTACTMCGACVEVCPVRIPITEQMQRLRVEAQRSPTEIVPHPIRGQGALHTFGEQM AWRTFDGIFSGSKAYRAFGWAATKFRALTPSKQLSWTNNHVPMKPAKKTLHQMMAEKLQK EKA >gi|241320893|gb|ACQV01000009.1| GENE 157 161277 - 165110 4741 1277 aa, chain - ## HITS:1 COG:NMB0998_1 KEGG:ns NR:ns ## COG: NMB0998_1 COG0277 # Protein_GI_number: 15676889 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 805 1 805 805 1590 97.0 0 MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQRKTGRSARMLFEVLGD IWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDNQQVDVLVAAAEKAVERFD SSFDETSQKRHQILERLSKITKPHNIMFDGLARVTHVTDATDWRVEYPFVVVNPDTEAEI APLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVINTEKLDKHRGVEYVELAGLDGKH PIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASCVGGNVAMNAGGKKAVLWGTALDNL AYWNMVNPQGEWLRIERVRHNFGKIHDEETAVFDIHTLDSDGINIVKTERLEIPGHKFRK VGLGKDVTDKFLSGLPGVQKEGTDGIITSVAFVLHKMPKYTRTVCMEFFGTVATATPSIV EIRDFLLTHESVRLAGLEHLDWRYVRAVGYATKAAGKGRPKMVLLADVVSDDEAAVQAAA EHICELARARDGEGFIAISPEARKTFWLDRSRTAAIAKHTNAFKINEDVVIPLERLGEYS DGIERINIELSIQNKLKLCAALEQYLSGKLPIDKMGTDLPTAELLGERGKHALAHVSAVK ARWEWLLNNLDAPLADYKARYGAAVHASLEAKDNESCFIAFRDFRLRVSVKADVMKPLSE IFSGKTDTKIIQGLGKIHAKTVRSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSV ERIMKIARSLGGVISGEHGIGITKLEFLTDEDLQPFWNYKNQVDPKHTFNRHKLMKGSDL RNAYTPSFELLGAESLIMEKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKI LGVGLLTEAFLYEEQTRRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAIRN YLADSGHKRFAPAASMGMAFLNATGPKTIKVLRAAMIQTGFPAQNFAYKIGKLLPIGTKK QKAEPKATVGTASIKEQVIHFINRPLPKSVPAKTPRSMLGIEDDKSIPIIRNPAAPEDTE AVFYFPGCGSERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTN NRVAFHRMANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVQLN GVQGQQYLYHDPCHTPIKTMNATQMVSSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKF RKQEEIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWL DEFVKKANNGGVEKVLL >gi|241320893|gb|ACQV01000009.1| GENE 158 165585 - 166802 797 405 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 4 404 14 425 447 311 40 1e-83 MNQLKTAVAGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTLLFQLVTKRKVPIFLGS SFAFIAPIIYSIGEWGLPSTMFGLFAAGFMYFVFATLIRWRGLDAVHKLLPPVVIGPVIM VIGLSVAAAASSMAMGQADGKQVIDYIDSLILSGFTFAVTVIVSVFGSKMMKLIPILIGV ASGYVLALIMGLVDTSAIINAPWFAVPHFETPQVNWQAALFMLPVAIAPAIEHIGGIMAI GNVTGKNYTKDPGLDKTLAGDGLGVCVAGLIGGPPVTTYGEVTGAVMITKNSNPVIMTWA AIFAIFMAFFGKFNAFLASIPMPVMGGIMLLLFGTIASLGIKTLIDAKVDLMQPKNLVIV SSVLTTGIGGMIIKVGTLSFAGVGLCAVLAIILNCVLPNTKSEEA >gi|241320893|gb|ACQV01000009.1| GENE 159 166970 - 167281 417 103 aa, chain - ## HITS:1 COG:no KEGG:NMA1411 NR:ns ## KEGG: NMA1411 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 103 1 102 102 184 89.0 7e-46 MTIQTDLLHEKISNEDYQRLIIKHSESFSDGEIRLLNEILEKFRFDVVQAQALAQAVMQQ VRFDPNDYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG >gi|241320893|gb|ACQV01000009.1| GENE 160 167364 - 168626 1680 420 aa, chain - ## HITS:1 COG:NMA1410 KEGG:ns NR:ns ## COG: NMA1410 COG0617 # Protein_GI_number: 15794322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 6 416 1 411 417 730 87.0 0 MNTQTIKTYLVGGAVRDHLLGLPVKDRDWVVVGADAQNMLAQGYQPVGKDFPVFLHPDSH EEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDSDGTIIDPFGGQQD LAAGILRHVSPAFAEDPVRILRIARFAARYGFQIADETMSLMRQMVENGEADALVAERVW QELAKGLMEKNPRRMIEVLRECGALKVLLPELDALFGVPQRADYHPEIDSGIHTLMVVQR AAEMNLSLAERYAALLHDLGKAKTPADILPKHYGHDVNGVEPVREVNQRLRAPKHCAELA ELVCRWHIMLHQVGQFKSKTILNVLKKTDAFRRPERFQTALNVCVADKQGRLNLEDAPYP QREHWLALLEAANQVDAGKIAAECRTQGKAHLIAEQIDHARLAQIRPLQKAYQAEKVGGY >gi|241320893|gb|ACQV01000009.1| GENE 161 168702 - 169664 1573 320 aa, chain - ## HITS:1 COG:NMB1220 KEGG:ns NR:ns ## COG: NMB1220 COG0330 # Protein_GI_number: 15677093 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Neisseria meningitidis MC58 # 1 316 1 312 315 507 88.0 1e-143 MEFLLSPIVLFFIVVVVFGFKSFIVVPQQEVYVVERLGRFHKALTAGLNILIPFIDRVAY RHSLKEVPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLR SVIGRMELDKTFEERDEINSIVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQIT AEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAINASNGEKIARINRAQGEA EALRLVAEANADAIRKIAEAVRSEGGAEAVNLKVAEQYVAAFSNLAKESNTLIMPANVAD IGSLVSAGLKIIDGNKPKAS >gi|241320893|gb|ACQV01000009.1| GENE 162 169674 - 170099 469 141 aa, chain - ## HITS:1 COG:no KEGG:NMC1115 NR:ns ## KEGG: NMC1115 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 133 5 136 139 133 57.0 2e-30 MTIWFVAAAVVLIVELFIGTVYLLVVSVALVAAGIMYGLSGHFSAAVLTAAIISALGIWL VHGRLKNQLAPQVLNDDLDIGQNVRILRHLHDNIYEVAYRGTHWQAQAERPQDTFQTASS AVITAKNGNLLIIRTLSQPSS >gi|241320893|gb|ACQV01000009.1| GENE 163 170225 - 170884 461 219 aa, chain + ## HITS:1 COG:NMB1222 KEGG:ns NR:ns ## COG: NMB1222 COG0692 # Protein_GI_number: 15677095 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 219 1 219 219 331 71.0 7e-91 MQTWHEAIGAEKEKAYFQTILEKVRHERQAGITVYPPERDVFNAFRTTEFGNVKVVILGQ DPYHGAGQAHGLAFSVQPEIAVPPSLVNIYKELATDIEGFQIPQHGYLQHWAEQGVLLLN TVLTVRAGLAHSHATFGWEAFTDEVIRQLDKEREHLVFMLWGSHAQKKGAFIDRNRHLVL TAPHPSPLSAYRGFFGCKHFSQANAYLQAHGLEPIDWQV >gi|241320893|gb|ACQV01000009.1| GENE 164 170939 - 172012 1611 357 aa, chain - ## HITS:1 COG:NMA1097 KEGG:ns NR:ns ## COG: NMA1097 COG1118 # Protein_GI_number: 15794045 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Neisseria meningitidis Z2491 # 1 357 1 357 357 695 97.0 0 MSITIQNLNKHFGAFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGQIL FDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKEQIRTKVEEL LKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLR DIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGET DAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGYIRPHEWQIAAEHETPMIRAEIEKIH AVGALTHVLVKHGKQDVHITLAGSDAARYQIAEGKELKLIPKQVYVFSQNELIEYSI >gi|241320893|gb|ACQV01000009.1| GENE 165 172009 - 172869 1283 286 aa, chain - ## HITS:1 COG:NMA1098 KEGG:ns NR:ns ## COG: NMA1098 COG4208 # Protein_GI_number: 15794046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 285 1 285 286 446 95.0 1e-125 MKTHSTNPNLSEPRWLRVLLTATALGFLLLMLVVPLVAVFYEALKGGWDLYLQSLTDPEA WSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFV LLFGAHTTLGGWLEAQGIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALI LGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTIPLLVEIF YNEYNFTGAFALSGVLALLALATLLVQNIITKLQDKKLAAAERNAA >gi|241320893|gb|ACQV01000009.1| GENE 166 172954 - 173790 954 278 aa, chain - ## HITS:1 COG:NMA1100 KEGG:ns NR:ns ## COG: NMA1100 COG0555 # Protein_GI_number: 15794048 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 277 1 277 278 429 93.0 1e-120 MLLLKTPSVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGWSGFWNTITEPNVLAAV WLSLRMSFYAMLTNIVFGTLVAWVLVRYEFPGKGLVNALVDLPFALPTAVTGIALATLYA PNGWIGRFFEPLGIKIAFTPIGIWIALIVVSLPFIVRAVQPVLEELSGEYEEAAATLGAS RWTTFRRVLLPEITPALLTGAGMMFARSTGEYGSVIFIAGNIPMVSEILPLIITGKLEQY DAQGASAVALFMLMISFVILLILNIMQWTLSRRAGAKV >gi|241320893|gb|ACQV01000009.1| GENE 167 173951 - 174400 641 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758716|ref|ZP_04756829.1| ## NR: gi|241758716|ref|ZP_04756829.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 149 1 149 149 251 100.0 1e-65 MNKIWISTLLLALATAVSAAPIFECTDSAGRKVYTQAGGKNCKASNIGKPSVYTSAPVSI PATPISPSKAEQAEEAVAPVNLADVGATKRALDTAKKNLEEGKKVRYGNERNYARYLERI KGLEKAVRSAQENHDATQRQPASQDPVAY >gi|241320893|gb|ACQV01000009.1| GENE 168 174413 - 174607 210 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225076062|ref|ZP_03719261.1| ## NR: gi|225076062|ref|ZP_03719261.1| hypothetical protein NEIFLAOT_01094 [Neisseria flavescens NRL30031/H210] # 1 64 33 96 96 118 98.0 1e-25 METHKIYYAVIILVCAASMLLSPFFYIRRTRSGAELRHAPRQWKPILFANIIMIAALFVW WKWF >gi|241320893|gb|ACQV01000009.1| GENE 169 174793 - 176421 2615 542 aa, chain + ## HITS:1 COG:NMA1409 KEGG:ns NR:ns ## COG: NMA1409 COG0488 # Protein_GI_number: 15794321 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis Z2491 # 1 541 1 541 542 1060 99.0 0 MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFMKILGGDLEQTAGEVAI ENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAIYANPEATEDDYMKAAELE AKFAEYDGYTAEARAAELLSGVGISEDLHNATMAEVAPGFKLRVLLAQALFSKPDVLLLD EPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEVCTHMADLDYNTITIYPGNYDDY MLASAQSRERALKDNAKAKEKLQELQEFVARFSANKSKARQATSRLKQADKIKSEMVEVK PSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFETQLFKNLNFILEAGQRLAIIGPNGAG KSTLLKLLAGAYNPEYSDGLLPDEGTIKWAEKASVGYYPQDHENDFDVDMDLSEWMRQWG QEGDDEQVIRGTLGRLLFGSNDVVKKVKVLSGGEKGRMLYGKLLLLKPNVLVMDEPTNHM DMESIESLNMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKGGYEHYLGDYESYLEKKG LV >gi|241320893|gb|ACQV01000009.1| GENE 170 176646 - 177860 1638 404 aa, chain - ## HITS:1 COG:NMB0877 KEGG:ns NR:ns ## COG: NMB0877 COG1686 # Protein_GI_number: 15676773 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis MC58 # 26 392 18 383 389 386 53.0 1e-107 MKKTLLSLIFAALLNTPALAADPVASAPVVQSEAQTQPLLHSINSPTTPPEIAATAYIVT DLHSKQTLASNNADTPIEPAALTQMMTAYLAFKALENGTLEAGQMLTVSNAAWKVEGSRM FLDPKVPVSVSSLIKGTTIQSANDAAITLAEALGNGSIDEFVKQMNEEAKRLGMKHTHFN NPTGISSNGHVSTVGDLAILAAALINDYPKYYPLFANKSFKYNNIEQPNRNLLLYRDSSI DGLKTGYSEGAGYHLAASSKRNNRRIVSILAGAESTEARASESSKLLNWSLQAFDTPKLY NGGEVISQVKVYKGSTKAVDIGFLDDVYITIPHDTGKNVKPILETLQPVLAPIEKGQVLG KLKVMKDGKIIAEKDVVALTGVEEGSWLRRMWDAIVLWFKSLFS >gi|241320893|gb|ACQV01000009.1| GENE 171 178068 - 179591 1557 507 aa, chain + ## HITS:1 COG:NMB0878 KEGG:ns NR:ns ## COG: NMB0878 COG1171 # Protein_GI_number: 15676774 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Neisseria meningitidis MC58 # 1 507 1 508 508 860 85.0 0 MNHSLPLSDYLTRILTASVYDVAVETPLDLARSLSGRLNNQVLLKREDLQPVFSFKIRGA YNKMAKLPKEALDCGVIAASAGNHAQGVALSAQYLGCRAVIVMPETTPKIKIDAVKSRGG EVVLKGVSYNDAYDYAMELAEKEKLTYIAPFDDPDVIAGQGTIGMEILRQHRNINAIFVP IGGGGLAAGVAAFIKQVCPEIKVIGVQTDDSCCMKQSVEAGEIVHLKDVGLFSDGTAVKV VGEETFRLCKELLDEIITVNTDMLCGAIKDIFDDTRSITEPAGALALAGLKAYVAKNNIQ GQNLVAVTSGANMNFHRLRHVSERSELGEGNEGIFAVTIPEEKGSFLKFINVLGSRNITE FNYRYGNDNNAHIFVGLQTAGAQDLAVISKQLADAGLPNVDLTNDEIAKIHIRYMVGGRT EKVSSERLVSFEFPERPGALSRFLNHMRAEWNITLFHYRNHGADYGRILVGIDVPESDNE AFADFLESLGYVYKEETDNPAYKLFLA >gi|241320893|gb|ACQV01000009.1| GENE 172 179651 - 180367 939 238 aa, chain - ## HITS:1 COG:NMA1542 KEGG:ns NR:ns ## COG: NMA1542 COG0220 # Protein_GI_number: 15794435 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Neisseria meningitidis Z2491 # 7 237 6 236 238 398 80.0 1e-111 MSENIPENTPENTVPEEHKRSIRSFVLRQGHMTAAQQRAIDTMWPQFGVDFQDAPLDLNR AFGRDNPKVLEIGFGMGVATVEIAKRLPDTDFLAIDVHGPGVGNILKLIEEEHISNIRVM RHDAVEVVEKMLEDGSLDGIHIFFPDPWHKKRHNKRRLVQVPFVEKLLPKLKSGGYVHMA TDWEEYAVQMLEVLSSFDALQNTAADYAPTPDYRPETKFEARGKRLGHGVWDLVFRKK >gi|241320893|gb|ACQV01000009.1| GENE 173 180505 - 181161 876 218 aa, chain - ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 216 1 216 218 342 82.0 3e-94 MTIKITLIDDHTLFRSGIKALLSRQPDFEVVGEASDGLAGVKMVEQLKPDVVLLDLDMPV MNGREALAQILSINPQLTVIMLTVSEDSDDLTECMRMGAKGFLLKNINADFLLESIRKAV DGDNVFSPEMTSRLVQSLISPSPSRSDHLLEQLTPREMEILGYLAAGHSNKIIARHLNLA ESTVKVHVQNLLRKLNLSSRVQAAVYAVQHKVPQPVLS >gi|241320893|gb|ACQV01000009.1| GENE 174 181158 - 182918 1490 586 aa, chain - ## HITS:1 COG:NMB1249 KEGG:ns NR:ns ## COG: NMB1249 COG3850 # Protein_GI_number: 15677120 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Neisseria meningitidis MC58 # 8 581 8 586 590 645 61.0 0 MRLFSGSSDGLSLSSRLKLLTFLWVSSAFLSIVFTLLLSWRLENAAKTIEDAGSLKMQVY RLAYMASVRTPNAQIDNQIKEFERTLANVTQSDAIHPLIPSQTPLAYDLIQSMLLIDWES NIKPSLQHYERPTQIGLYRFAGNIELFLQAMENANEQNTLWLRRFQMAMMLMIFVAAGLM IVWHYSWIIRPLEKLRDGVETISKGHFGVQIETDQIREFAQVSKGFNQMSRRLHTLYTDL EGQVAKQTQDLARQNRDLTLLYQTTRNLHQTFTPQQAAEEFLTQILPAFSALGGTVYLSD DERKRSDLAASVGETEEGNRVEFPIVYQDEQLGVLTLYFSDGHMPDEQDEKLLHTLSGQL GISIANNRMEQERRLLAVLQERNLIAQGLHDSIAQALTFLNLQVQMLESAFASDQREQAE ENIGFIKDGVQECYEDVRELLMNFRTKISNKDFPEAVESLLARFERQTGIPVDLKWQDDG QALNYDEHLQIIFILQESLSNIRKHARAQHVSVEIANHGDFVMTIRDDGAGFNKEHLSNR PSGEHVGLGIMQERAQRINAELAITSQIGQGTAVMLTLPQQMRTAS >gi|241320893|gb|ACQV01000009.1| GENE 175 183177 - 183758 551 193 aa, chain + ## HITS:1 COG:NMA1417 KEGG:ns NR:ns ## COG: NMA1417 COG0746 # Protein_GI_number: 15794329 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Neisseria meningitidis Z2491 # 1 191 1 191 192 292 69.0 3e-79 MKIFALILAGGQGSRMGGVDKGLVQWHNKALIDHVIEKIRPQVSHIAISANRNLESYAQR SAHVFSDARQWQHYGPLAALCTAANDLQIATADWLLIVSCDMPRLPENLVSQFETIARRT PLCNAFYVETPARPHYSVMFIRPQILQSTVPYLYSGMRSIRGWLQQQRARVVHFPYEQDF ISYNTENDLAQPL >gi|241320893|gb|ACQV01000009.1| GENE 176 184251 - 184928 284 225 aa, chain + ## HITS:1 COG:FN1923_2 KEGG:ns NR:ns ## COG: FN1923_2 COG0338 # Protein_GI_number: 19705228 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Fusobacterium nucleatum # 22 223 103 302 304 142 42.0 4e-34 MKNNKLIDILSYIEQRIAQLTLSQTNENAYRQLRQEYNQYKHPLDLFVLTAFSFNHQIRF NNSHQFNTPFGKDRSSFNERMKSNLIDFIYALQKENVQFSQKSFELLDYSYLKSNDLVYC DPPYLITIGTYNDGKRGFKGWGIDEEYKLLQLLDDLNKQGIRFALSNVLMHKGKENRILQ DWLYQRNYTVHNLNMHYGNASYHTKNRDKSASREVLITNYSTENQ >gi|241320893|gb|ACQV01000009.1| GENE 177 184930 - 185994 474 354 aa, chain + ## HITS:1 COG:FN1935 KEGG:ns NR:ns ## COG: FN1935 COG3392 # Protein_GI_number: 19705240 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Fusobacterium nucleatum # 1 342 1 320 333 204 35.0 3e-52 MRYIGNKENVVATIHQIMQERGISGQSFFDVFSGTASVAKYFKRLNYQIFSCDLMYYSYV LQQAYVVNNGEPTFRQLLPHLNVQAQDLFATPLQNVLAYLNRLPEKQGFIYENYTPEGSY DLAQPRMYYTGENGMFIDKVRQQIDMWRKQQLIDEHEFFVLVAALIETVPFYANISGVYA AFHKTWDSRALKPMILREPKIIVNSYKNQCFQDDSRNILNQVQADIFYLDPPYNQRQYAP NYHLLETIARYDNPEIKGVSGMRDYSQQKSRFCNAQTALDDLEYFAQNGKYLYLLLSYNS EGLMPQGAILEVLKPYGAMVEMVGFEYLRFKSNNNGDSRHKKYVQEQLYILSKS >gi|241320893|gb|ACQV01000009.1| GENE 178 185991 - 187409 551 472 aa, chain + ## HITS:1 COG:no KEGG:Bmur_1620 NR:ns ## KEGG: Bmur_1620 # Name: not_defined # Def: hypothetical protein # Organism: B.murdochii # Pathway: not_defined # 4 132 3 131 131 139 51.0 2e-31 MTTLWILTEERPKKDVIQTIFQRVADELQIGFFSDSLKIVPIVENGLFSFKYQVLGIHTP KIQRILIKTVSGQSSFVDYLIYLQDDEPKSSETPLFAIEETKTDDSESRNTGVFQRCTKF IYIDLFYSNVKKIMLYSLQVAQKEKLSSTNLFGSRLLATYGVEVLGKILTDEQIKPFNSI DELIKHKNAMRLPPKNNIPILIKKFDDEIQISGRLFKSGSLSHDPNIGALSMISAVLRKL GWQEKITITSHGLVQENLSKSSTRNPNKFIQIANKLNIHLENLRLPESQISGNYWHFERK GEKLGTIFVHLAVEAFTQGYSIFENHAGCEKSYFRKSSGKVVPLEKYSNRDAYKSGDKSA IAHIPDLILLDVERLQVLNIEGKKYVNRNKGISELANYDFIEQNYIAPEYSNYRIIRTVV LYGSDVMNNQNLAIEIGFLLNKQGKMILGIRAPKLFEQAISNLLDYWSSHIR >gi|241320893|gb|ACQV01000009.1| GENE 179 188038 - 188877 850 279 aa, chain - ## HITS:1 COG:VNG1932G KEGG:ns NR:ns ## COG: VNG1932G COG0702 # Protein_GI_number: 15790813 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Halobacterium sp. NRC-1 # 1 264 9 286 303 98 28.0 1e-20 MNIIIFGGSGFIGSRTVQILKEQGHQVCTPDRRAFDFLHPNETAARRLLEGQDVLINCIG IMSRHAEILETVHHHTPKQLAAWAKSAGIKHWVQLSALGADPSQSINFVGSKGRGDDVIT QSGIPIAIARPSVVYGRGGTSCELFIKLARLPLLPLPEGGRFHLQPVHLADVAEGLAKLA VLTGNNHSIINMTSSQTLTLAEYLTTIRQTLHHKPPQRILPFPLRLIDPALPLANILSNS IISRDSFTLLKQDSCADYSDFAALLGREPLAAKNFAGCL >gi|241320893|gb|ACQV01000009.1| GENE 180 188919 - 189401 645 160 aa, chain - ## HITS:1 COG:CC2898 KEGG:ns NR:ns ## COG: CC2898 COG5528 # Protein_GI_number: 16127128 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Caulobacter vibrioides # 1 160 1 155 156 110 41.0 2e-24 MNTYLIVKTLHIISATLMVGTGFGTAFYLFWTNRSGSVAAQSVVSHWVIKADWWFTTPAV IFQPLSGLWMLYERGYTVATMLEQNWVWMTFALYIFSGICWLPVVWLQIRMAKIAEQAHK ENADTIPEPYWRYARRWELLGYPAFCATIVIYFLMVMKPI >gi|241320893|gb|ACQV01000009.1| GENE 181 189398 - 189787 495 129 aa, chain - ## HITS:1 COG:no KEGG:Nmul_A2144 NR:ns ## KEGG: Nmul_A2144 # Name: not_defined # Def: NAD-dependent epimerase/dehydratase # Organism: N.multiformis # Pathway: not_defined # 9 123 321 435 439 73 37.0 2e-12 MSDNSTHTLPAYLPYSMGLLWLWSGTQPLFFIPGMSLDLLHSVGIPDPLQWPTLIVASLL DIGFAFLCFSRLRSRSEIWLLQLITVAAYSLIIAFRLPEMWAHPFAPLVKNLPIMATLFF LYQSVGDKK >gi|241320893|gb|ACQV01000009.1| GENE 182 190053 - 190571 654 172 aa, chain - ## HITS:1 COG:RSp1241 KEGG:ns NR:ns ## COG: RSp1241 COG1510 # Protein_GI_number: 17549462 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 1 171 1 171 186 160 42.0 1e-39 MKLNPTTEKFILHWGEMGTKWGVNRTVAQIHALLYILGRPMNAEEITETLGVARSNVSNS IKELQNLRLVHTVHILSDRRDHFETSDDVWTLFRTIAEVRMQREIEPTRQFLQSLIDSPE FSQENETAKQRIQQTHDFISTLTVWANEMLKLSTSTMVKILKIGAGIQKFFR >gi|241320893|gb|ACQV01000009.1| GENE 183 190816 - 191601 697 261 aa, chain + ## HITS:1 COG:CC2958 KEGG:ns NR:ns ## COG: CC2958 COG3384 # Protein_GI_number: 16127188 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 1 261 1 256 256 248 48.0 6e-66 MKKMPVLFVGHGSPMNALDKENPFNQNFSLITQKFAKPKAILMISAHWYSSRLQVTSGKR PEMIYDFYGFPDELSQVQYPAPGSPELAEQVRSLLQPENVELNPTRGFDHGAWAVLKYLY PDADIPVVQLSLNRLQSAEWHFNLAKKLAALREQGVLIIGSGNIVHNLRAISWEHIDQIG AGYDWAFAFRETVNQAIATRDDETLVHYDQLGEKAKLSVPTPDHYLPLLYIMALREPQDN ITFFNDKLIAGSLSMTSVWVG >gi|241320893|gb|ACQV01000009.1| GENE 184 191876 - 192178 180 100 aa, chain - ## HITS:1 COG:no KEGG:PMIP19 NR:ns ## KEGG: PMIP19 # Name: not_defined # Def: putative conjugal transfer protein # Organism: P.mirabilis # Pathway: not_defined # 5 98 3 91 182 74 38.0 1e-12 MKFISTIIALVMGFPSIAAMAANPLDPPQMGGDERLACEALMCLVNPASQPSECQSALKK FHSIKHKHGHDTITARRNFLKKCPAQDRSGFDDFIDSIIK >gi|241320893|gb|ACQV01000009.1| GENE 185 192236 - 192757 254 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261379479|ref|ZP_05984052.1| ## NR: gi|261379479|ref|ZP_05984052.1| conserved hypothetical protein [Neisseria subflava NJ9703] # 1 173 1 173 173 226 64.0 4e-58 MKKLLFIVLELVSFNIYAADPTYDVTKGALQNDSSLCQYGYNPNCGSSGHRQQRRSTEII NIKVPSKYLALAVNIKTGLSGGALDMDSLEAAKKQAIKTCEQGGRNAPCKIAVWVRNGCL AVAQGRHKGKWKTFYGVDDLGRAEANALNQCHAVSGITQCRITTQEACSLPRY >gi|241320893|gb|ACQV01000009.1| GENE 186 192822 - 193271 392 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758819|ref|ZP_04756932.1| ## NR: gi|241758819|ref|ZP_04756932.1| VirB6 protein [Neisseria flavescens SK114] # 1 148 224 371 374 156 66.0 4e-37 MLGVMAEISMDLVANIAITDAVSNIASALIGGNVGGIMQTVTQQLGLGLMLSTLLITVPP MAGAWFNGMMAGFSAYSVIGNGNRQEVPPHLDGGASQRASYDVQSRTEHSNGSQLNSPQQ TIWTTGGSQTGGSSTDAIKQTNQPSKGNT >gi|241320893|gb|ACQV01000009.1| GENE 187 193431 - 193733 237 100 aa, chain - ## HITS:1 COG:no KEGG:PMIP19 NR:ns ## KEGG: PMIP19 # Name: not_defined # Def: putative conjugal transfer protein # Organism: P.mirabilis # Pathway: not_defined # 5 98 3 91 182 73 39.0 2e-12 MKFISTITALVMGFSSVASMASNPLNPPQMGGDERLACEALMCLVNPASQPSECQSALKK FHSIKHKHGHDTITARRNFLKKCPAQDRSGFDDFIDSIIK >gi|241320893|gb|ACQV01000009.1| GENE 188 193801 - 194328 68 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255066593|ref|ZP_05318448.1| ## NR: gi|255066593|ref|ZP_05318448.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] # 1 175 1 176 176 245 73.0 8e-64 MKKLLLSLLGLVSLNIYANGCGGEYQPATGTCRIIDSSGRQILYNVGRPQSSNNGYTQSQ PSVVNIDVPSKYLALAINLKTGVSGGALDMDSRAAAEKEAIKTCERGGSNAPCKVIVWAG NGCIAIARGNEKKPTLFTASERPGLAEEKALRKCRAAGVSGCRLFIPETCSLPKF >gi|241320893|gb|ACQV01000009.1| GENE 189 194386 - 195510 658 374 aa, chain - ## HITS:1 COG:no KEGG:xccb100_1687 NR:ns ## KEGG: xccb100_1687 # Name: virB6_1 # Def: VirB6-like membrane protein # Organism: X.campestris_B100 # Pathway: not_defined # 6 342 12 342 359 200 35.0 9e-50 MMDLLLYSSIRDYIYARISFFTEHVLSKNLTLVFTIIVALLTLWIMIQGYLIATGRSQEG LKGFVYGLGKTYLIVAVALGVAAGSDFSVRVLTDTLSDGISQIMTGDSDVGSKCLTQDSK SIIGCRIDQNLTATQSMMGILDGIDTADSEYLEGKVTQARWFVGVGTAGPAIVAGTMLIM FRIAMALFIGFAPIFILCLLFKKTAPLFQKWLYYGLATIFSSVMLGVMAEISMDLVANIA ITDAVSNIASALIGGNVGGIMQTVTQQLGLGLMLSTLLITVPPMAGAWFNGMMATYSGYN AMQGWGTGQPATPPGMNSQQQQVNYNARNSGGGHDPKSDNPQLPMPIWTTGGIQQTGSTS TDAIKQPSKGSNLS >gi|241320893|gb|ACQV01000009.1| GENE 190 195557 - 196207 587 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758729|ref|ZP_04756842.1| ## NR: gi|241758729|ref|ZP_04756842.1| hypothetical protein NEIFL0001_1044 [Neisseria flavescens SK114] # 1 216 1 216 216 327 100.0 2e-88 MQDAINWAMDAADRAVTLSNWVTQLQNWRTQLQHWVRGQMEQIPELKELLDKKEENAIKK MFQNRKDRCNRIANQTSKNLCIGTVTLEEKKFSLLREMETKINETFSEINKTSIKKQNSN AQGQSNTAASAEAEVIAKLQQLEIKLKNYQSAINSIDQMLDQYKWARVNLTKDQLSGSNS NNLTKASASLVLQSKVKKFHDEAKAKRAISTGYKLR >gi|241320893|gb|ACQV01000009.1| GENE 191 196439 - 198889 1408 816 aa, chain - ## HITS:1 COG:BMEII0028 KEGG:ns NR:ns ## COG: BMEII0028 COG3451 # Protein_GI_number: 17988372 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Brucella melitensis # 5 802 14 821 831 615 40.0 1e-175 MFTPDASISQFVSLSTHVSPTIVKTTGGDYLTTWHLSGLPFVGREEWELEHKHNTFNRLL QSLRAPDYVNVAFWVHDIRRHRSIDLRPEFQESFNQSLSNRYFSRLSQEKLMNNELYLTM IYRPVVDGKKFVDKSGNIDRLKAEQEQAIGTLNELATNLEAVLKDYHPYRLGMYEGKNGT VFSETLELFGYILNRINEPVPVLPAPVYNYLPLSRHLFSAKTGDYIVRTPEGKNHYGAIL NLKEYPDGTYPGILNGLKYLDVEYVITHSFSPMSRYDAMKTLERTRGMMISSGDKSFTQI AELDHAMDQLASGNFVLGGYHFSLAIYADSQEQLSQNIASARAELSNAGFVTTKEDLAVC AAYYAQLPGNWNYRTRIANLSSLNFLGLCPLHNFAVGKREGNPWGQCVTVLQTTNGQPYY FNFHATLEGEDSEGEKAIANTMVIGKSGTGKTALINFLLSQVQKYDPKPTIFFFDKDRGA EIFVRACGGAYMALESGQPTGFNPFQCENTEANVQFLCGLMKQLGGKAHYSAAEDDDILR AVRAMLDTPPALRSISNFQKSLPNTGDDSLYANIRKWTRGNSLGWVFDNPQDKIDFSGAN IIGFDYTDVIENPQVRDPVIGYLIHRMEELIDGRRFIYIMDEFWKILDGEGGLKEFAKNK QKTIRKQNGMGIFATQSPEDALKSDISAALIEQTATMILLPNPNADKKDYIDGLKLTDSE FQVVKSLDERSRCFLVKQGHASAVCQLNLRGFDDELAVISASTDNIDIMDGIIKQTAERL GVEIDAVRPQDWLQTFYEERKGSGKKAAANVMRNAD >gi|241320893|gb|ACQV01000009.1| GENE 192 198952 - 199158 113 68 aa, chain - ## HITS:1 COG:no KEGG:XAC2615 NR:ns ## KEGG: XAC2615 # Name: virB3 # Def: VirB3 protein # Organism: X.axonopodis # Pathway: Bacterial secretion system [PATH:xac03070] # 3 66 36 99 103 80 64.0 2e-14 MGMYFNLFFLLTIPFIILIMRQMAKRDDMIFRFLGLRLKFRLKARNREEFPDTWCFSPNE YRNNPPKQ >gi|241320893|gb|ACQV01000009.1| GENE 193 199267 - 199656 503 129 aa, chain - ## HITS:1 COG:no KEGG:Smal_2443 NR:ns ## KEGG: Smal_2443 # Name: not_defined # Def: conjugal transfer protein TrbC # Organism: S.maltophilia_R551-3 # Pathway: Bacterial secretion system [PATH:smt03070] # 9 119 10 122 136 101 53.0 8e-21 MKNTQIQKKSRFTAENVATAAFVAAAFLAPAVGMAADDFTSASGGACKFIKNIHTVLNLM SVAVVTIAIIFAGYQIAFAHKRISDVAPILIGGVLIGAAGQIAKMLVGNADSCSAGTTSA MMQVLQFFA >gi|241320893|gb|ACQV01000009.1| GENE 194 199708 - 200346 217 212 aa, chain - ## HITS:1 COG:no KEGG:XAC2617 NR:ns ## KEGG: XAC2617 # Name: virB1 # Def: VirB1 protein # Organism: X.axonopodis # Pathway: Bacterial secretion system [PATH:xac03070] # 2 172 7 172 280 211 63.0 2e-53 MFFSCTDLAVPHDVMHHVVRVESSGNPYAIGVVGGRLQRQPKNLAEAVATAKMLEQKGFN FSLGLAQVNRYNLKKYGLHSYEHAFQVCPNVKAGSHILRECYNRAKDWGKSFSCYYSGNF VTGYKHGYVQKIFSSMRQGRKTLPQNAIPVISNTSNAPRTIVQMTAQQPNRQNSTIATNP QSYPVTVSKNRHNLQDNNTAPSNIYTDSAAVF >gi|241320893|gb|ACQV01000009.1| GENE 195 200514 - 200978 270 154 aa, chain + ## HITS:1 COG:no KEGG:Smlt3007 NR:ns ## KEGG: Smlt3007 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia # Pathway: not_defined # 14 115 16 117 148 89 39.0 3e-17 MFLLRTLLLSVGVGVLVVGCASQSAPDFPKSWKQLNELPDQVTEIPLVRPHVYQVTQLDT TVKGLLERWGEEAKMPVVYDHTLDFTLYKKVLTVRNTNLENALGELSKLYEDRGMVFYIQ NGVIMAHKKMGAAVKNSEKRKHEKSVKTDVKSQN >gi|241320893|gb|ACQV01000009.1| GENE 196 200990 - 201883 550 297 aa, chain + ## HITS:1 COG:BMEII0032 KEGG:ns NR:ns ## COG: BMEII0032 COG3736 # Protein_GI_number: 17988376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, component VirB8 # Organism: Brucella melitensis # 19 241 25 234 239 89 31.0 7e-18 MFNSNKNTTNDKIQKAVKKSLDFETTLVDIRKKSEKRAWVVAGVATFSSLCLLGGLFYIL PLKEKEPYLVMADIYTGQATVAKLAGNWNNFDITKNEAVNKSNISHFIIARESFDSQIIY DNDWATVYSMSVAGVSDSYRNLMNKSNPNSPFNLYGSTQSIRVKILSIVLNNSGKADGRD ASATVRFQRFLLNKSTGISRFIDSNVATLTYTYNSNLKMDEKYRLKNPLGFQVLSYRVDP DASESAIQDLSSDYLSVGALSESQSQQQMQSTPQSEAPTSLDNNVSGTSPISVESGN >gi|241320893|gb|ACQV01000009.1| GENE 197 201886 - 202611 139 241 aa, chain + ## HITS:1 COG:BMEII0033 KEGG:ns NR:ns ## COG: BMEII0033 COG3504 # Protein_GI_number: 17988377 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB9 components # Organism: Brucella melitensis # 37 238 3 214 247 80 26.0 3e-15 MLKKMFLATAVSWLLQGSVYAAAIQEYTFQENMTYPVHTAQGVVTQIELDSREKVKDFGA GLSGGWDLVRRENVFYLRPKSDAVDTNLIVRTQAHQYIFELKVLKNVVGNLAEASDKGVN YQVKFRYPDSTDFSLRASTLAGYSLKYDSSKTYNTNYDVAVSDTSRWLVPLKVYDDGRFT YVHLNKGKFTGDFPTIYGRKSEKGTEFVLNSNVEGSVVIVHGTYPFLVLRHGNDVVGLRR N >gi|241320893|gb|ACQV01000009.1| GENE 198 202614 - 203801 486 395 aa, chain + ## HITS:1 COG:BMEII0034 KEGG:ns NR:ns ## COG: BMEII0034 COG2948 # Protein_GI_number: 17988378 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB10 components # Organism: Brucella melitensis # 164 393 26 259 265 127 35.0 4e-29 MSDKLNNEYHKDSESSQNLYSSQYEQEQLAGLEENAPQLNAPVDRTVNKKAIAFIVAAGF GLAGLGAFAYHQFSGSEEAPPPERPQVVTVPDLPAPEPQVIETQPVDLLEEKKSESETDT STTKPINVSIPSVVETLPPTTPTTPTTPTTPTTPNLPIQPIIPTGDMYANMNNAFVQDGE AAQKESGASTAQTNAVRYMHNRDKLLLQGTYLRCVLETKIVSEVKGFTSCIITEPVYSAS GKYLLLPKGSKVMGQYGSSNPTGPRMEVIWNRIITPEGVDVTLESPGVDNLGAAGHVGKF KSHWGSRLASALLISMISDAFKYAATEYGPQGQTVTTNTSTTTNPYESDTANTLKQQAIS QLERNNARPNTVTINQGTLINIYTAQDIDFSSVMQ >gi|241320893|gb|ACQV01000009.1| GENE 199 204654 - 205823 847 389 aa, chain + ## HITS:1 COG:XFa0016 KEGG:ns NR:ns ## COG: XFa0016 COG3505 # Protein_GI_number: 10956727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Xylella fastidiosa 9a5c # 1 376 160 533 656 285 39.0 1e-76 MTSGYRKEVLGQEVYLFNPFAEDGRTHRWNPFTYVSSDPDQRVSDLMSIAAMLYPDGDSR DKFWVAQARNAFLAFSLYCFDEYEAMADFPVVGKENEPACTLGKIYRLSSGNGTELKEYF TSLSQQPYLSEATKTAFSGLISQEKETFGSIMGTFKEPLNPWINPVIDAATSADDFLLTD VRKKKMTIYIGILPNKLAESRVIVNLFFSQLINQNTKELPQDNPDLKHQCMLLMDEFTSI GKVEIIAHSVSYMAGYNIRLFPIIQSVAQLDAVYGKEYARTIITNHALQIIYTPREQQDA NEYSEMLGYTTVKRKNVSRGRERSVSESEERRALMLPQELKAMSQDKEIILYEGMSHPAQ VGKIRYYQDGTFTKRLMEAVKVASLKGKR >gi|241320893|gb|ACQV01000009.1| GENE 200 206010 - 206540 125 176 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|298370418|ref|ZP_06981734.1| ## NR: gi|298370418|ref|ZP_06981734.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str. F0314] # 1 175 41 211 213 207 58.0 2e-52 MEQVRNRCRSMLHKVENRDDLIKQMYDTAFKDDCLYTMYASELQEIWQIPVIEAYDYMQH NQDIHSSIGMYVVFRHTELKSSLYITQTKEYLDKIGSIFPENAFPKFFPKPMTHEIPEGV YLDFEYSAKRKDDDSIKERLDYYWRESGREIIATNSGGGAILALEFCSNLKMSPMP >gi|241320893|gb|ACQV01000009.1| GENE 201 206633 - 208261 649 542 aa, chain + ## HITS:1 COG:alr0276_3 KEGG:ns NR:ns ## COG: alr0276_3 COG2931 # Protein_GI_number: 17227772 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 236 300 140 209 293 70 52.0 1e-11 MSELDRIKQDSELVEQINHFASKGGHIKPAPKNREGAYYDPKNKSIHFEQDIRYITARTM SHEVGHALGKHQAKSASYYDTAKAYAQARGYGEAEAIFNEARMVAYEERYNGRAYSTGIS GDLYPYVKGKSFGEVKDLIARQNMYGMYPSNGTGSIRMTYYETDIEHFLNTRTNFSKDFK EASISPNSKQVFVKHMANYDTFGNKGNNKIVADGSYSRDSLLIGRAKTYLKSGAYMYGDA GDDILKGTNQNDILLGGSGNDVLIGGNGNDILAGNSGRDKLFGGKGHDKYRADNLDIIRD SDGKGEVSLNGYILQGGVRDLSQPNRFVYRSAGMVYEWDRNTGTLDINGLKIKNFKNGDL GIHLQEKKTGQYSSGVRDSNSIRVHSATGIESTKILHQPKSNIAHAPVPGDWDNMQSVKP LKLEAIPQHAQNIYQQSKQIFTEFCNKKDISYDERSLDNIAMALAAEGYANKMRGASLIN IKENGQILIGDKAPELRTASVDMQKAAVTPIEESIIKVQETAQQFELETQQKQLAQVQAR GI >gi|241320893|gb|ACQV01000009.1| GENE 202 208345 - 209364 194 339 aa, chain + ## HITS:1 COG:BMEII0035 KEGG:ns NR:ns ## COG: BMEII0035 COG0630 # Protein_GI_number: 17988379 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Brucella melitensis # 25 310 31 317 361 270 46.0 3e-72 MDELNSTISADFLDYQYEVLGITSFLKDPDVTEICINRPGEVFLETSQGWKKVEVNTLNF DRARQFCTAVVNESNTGQRITEAEPMVSLTFPTGQRAQFVIPPACDSGKASITIRLPSKH TKSLSQYSKDGFFSQIIELNGELSPQDKELVELKNNRNYEEFFKKAVEYKKNIVVSGATG SGKTTFMKALVNHIPLSERLISIEDARELFIPHENVVHLLYSKGGQGSSNITAKSCMESC LRMKPDRIILAELRGDESFYFIRNCASGHPGSITSCHAGSTEQTWDQLALMVKASPEGSG LEFEVIKNLLRQTIDIVVHIKAHAGQRYITGIDFNPIKT >gi|241320893|gb|ACQV01000009.1| GENE 203 209636 - 209767 112 43 aa, chain + ## HITS:1 COG:no KEGG:NGK_1972 NR:ns ## KEGG: NGK_1972 # Name: not_defined # Def: putative ArsR-family transcriptional regulator # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 31 1 31 103 62 93.0 5e-09 MPQQTMNLMRECIPIFTVLSDENRHQILRVFPVNAWKPRDVPV >gi|241320893|gb|ACQV01000009.1| GENE 204 209740 - 210540 526 266 aa, chain + ## HITS:1 COG:YPO3984_2 KEGG:ns NR:ns ## COG: YPO3984_2 COG3468 # Protein_GI_number: 16124111 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 8 250 223 462 476 80 27.0 4e-15 METEGRSRLDVDSSQYVAQVGYDFNRSEMQNGVPQSLSGVYFAYSRADSRFYDQYRAENG VVAADKYTGKGKTTAANIGVYHLYRAPNNAYVDTVAQFSYLTNKYNFVSNPEVRQHGWSG ALSVEGGHSFALGNSNWRIEPQTQLIYQRLKLQSFHDGVRDVAQGSDNNLRGRIGVRLSH SKDFQRNPNVYFVANVWHDFVKAKSVLIGDTKYGENYSRTWLEGGAGLNVPFGNHAIHAD LRLEHSLGNKGNRSGAKAVLGYSYAW Prediction of potential genes in microbial genomes Time: Thu May 26 11:26:38 2011 Seq name: gi|241320724|gb|ACQV01000010.1| Neisseria flavescens SK114 ctg1118407793881, whole genome shotgun sequence Length of sequence - 137644 bp Number of predicted genes - 132, with homology - 130 Number of transcription units - 69, operones - 37 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 27 - 73 14.8 1 1 Tu 1 . - CDS 88 - 1530 1895 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 1570 - 1629 5.0 2 2 Tu 1 . + CDS 1879 - 2295 206 ## gi|241758990|ref|ZP_04757102.1| conserved hypothetical protein + Term 2304 - 2337 2.1 - Term 2566 - 2630 16.2 3 3 Op 1 . - CDS 2669 - 3511 1185 ## NMCC_0113 periplasmic protein 4 3 Op 2 3/0.100 - CDS 3527 - 5287 1333 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 5 3 Op 3 . - CDS 5284 - 5787 570 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase - Prom 5822 - 5881 4.4 - TRNA 6049 - 6124 83.3 # His GTG 0 0 - TRNA 6134 - 6210 84.3 # Arg TCT 0 0 - TRNA 6238 - 6315 85.4 # Pro TGG 0 0 + Prom 6349 - 6408 6.6 6 4 Op 1 . + CDS 6517 - 7368 1122 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 7382 - 7432 13.1 7 4 Op 2 . + CDS 7453 - 8526 1361 ## COG0628 Predicted permease + Term 8547 - 8603 18.2 + Prom 8570 - 8629 5.3 8 5 Tu 1 . + CDS 8656 - 9897 1949 ## COG0814 Amino acid permeases + Term 9904 - 9953 10.5 + Prom 9910 - 9969 2.4 9 6 Op 1 . + CDS 9991 - 10464 680 ## PSPTO_2613 hypothetical protein 10 6 Op 2 1/0.250 + CDS 10461 - 11522 446 ## COG0438 Glycosyltransferase 11 6 Op 3 4/0.050 + CDS 11543 - 12121 937 ## COG0241 Histidinol phosphatase and related phosphatases 12 6 Op 4 3/0.100 + CDS 12193 - 12924 1238 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 12937 - 12968 1.5 13 7 Op 1 . + CDS 12989 - 13684 870 ## COG1451 Predicted metal-dependent hydrolase + Prom 13767 - 13826 3.9 14 7 Op 2 . + CDS 13858 - 14229 552 ## Asuc_0348 hypothetical protein + Term 14248 - 14293 14.4 + Prom 14297 - 14356 5.8 15 8 Tu 1 . + CDS 14386 - 15861 1958 ## NGO1688 putative outer membrane protein OmpU + Term 16070 - 16117 10.8 + Prom 15956 - 16015 6.8 16 9 Tu 1 . + CDS 16154 - 17650 2370 ## COG0657 Esterase/lipase + Term 17696 - 17747 14.3 + Prom 17691 - 17750 8.8 17 10 Tu 1 . + CDS 17857 - 18534 535 ## Cpin_6784 hypothetical protein + Term 18573 - 18614 12.0 + Prom 18660 - 18719 14.1 18 11 Tu 1 . + CDS 18813 - 19856 1356 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 19866 - 19914 14.3 - Term 19971 - 20026 18.2 19 12 Tu 1 . - CDS 20045 - 22228 2012 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 22306 - 22365 5.5 - Term 22365 - 22416 14.1 20 13 Tu 1 . - CDS 22440 - 23045 892 ## COG0655 Multimeric flavodoxin WrbA - Prom 23133 - 23192 3.3 + Prom 23012 - 23071 3.8 21 14 Op 1 . + CDS 23145 - 24347 942 ## COG1295 Predicted membrane protein + Term 24355 - 24402 1.1 + Prom 24350 - 24409 5.8 22 14 Op 2 . + CDS 24447 - 26228 2681 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Prom 26528 - 26587 4.2 23 15 Op 1 . + CDS 26643 - 26921 668 ## COG0640 Predicted transcriptional regulators + Prom 26974 - 27033 2.0 24 15 Op 2 . + CDS 27089 - 27859 1380 ## COG0708 Exonuclease III + Term 27882 - 27925 10.0 - Term 27973 - 28009 4.1 25 16 Op 1 . - CDS 28243 - 30525 1761 ## COG0457 FOG: TPR repeat 26 16 Op 2 . - CDS 30571 - 33378 4040 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 33407 - 33466 6.2 - Term 33713 - 33755 8.9 27 17 Op 1 42/0.000 - CDS 33770 - 34195 731 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 28 17 Op 2 42/0.000 - CDS 34206 - 35603 2041 ## COG0055 F0F1-type ATP synthase, beta subunit 29 17 Op 3 42/0.000 - CDS 35642 - 36517 977 ## COG0224 F0F1-type ATP synthase, gamma subunit 30 17 Op 4 41/0.000 - CDS 36542 - 38089 2209 ## COG0056 F0F1-type ATP synthase, alpha subunit 31 17 Op 5 38/0.000 - CDS 38100 - 38633 686 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 32 17 Op 6 37/0.000 - CDS 38638 - 39108 586 ## COG0711 F0F1-type ATP synthase, subunit b 33 17 Op 7 40/0.000 - CDS 39182 - 39418 474 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 34 17 Op 8 . - CDS 39482 - 40348 889 ## COG0356 F0F1-type ATP synthase, subunit a - Prom 40411 - 40470 3.5 - Term 40908 - 40953 12.0 35 18 Op 1 . - CDS 40966 - 41826 1438 ## COG1475 Predicted transcriptional regulators - Prom 41861 - 41920 4.3 36 18 Op 2 . - CDS 41928 - 43712 1066 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 43750 - 43809 5.2 + Prom 43578 - 43637 5.2 37 19 Tu 1 . + CDS 43880 - 44809 1502 ## COG2326 Uncharacterized conserved protein + Term 44827 - 44869 9.4 - Term 44816 - 44856 7.4 38 20 Op 1 . - CDS 44863 - 45297 353 ## COG3787 Uncharacterized protein conserved in bacteria 39 20 Op 2 . - CDS 45349 - 45906 557 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase - Prom 45940 - 45999 3.7 - TRNA 45997 - 46082 61.7 # Leu GAG 0 0 - Term 45951 - 45984 3.1 40 21 Op 1 9/0.000 - CDS 46098 - 46457 373 ## COG1314 Preprotein translocase subunit SecG 41 21 Op 2 . - CDS 46465 - 47238 1120 ## COG0149 Triosephosphate isomerase - Prom 47285 - 47344 4.6 + Prom 47328 - 47387 4.0 42 22 Op 1 3/0.100 + CDS 47421 - 48077 1100 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase + Term 48080 - 48123 9.0 43 22 Op 2 . + CDS 48130 - 48459 389 ## COG0607 Rhodanese-related sulfurtransferase + Term 48479 - 48520 10.0 - Term 48467 - 48507 10.6 44 23 Op 1 . - CDS 48526 - 49956 1260 ## COG0531 Amino acid transporters 45 23 Op 2 . - CDS 50055 - 50942 456 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) - Prom 50970 - 51029 4.0 - Term 51036 - 51076 10.6 46 24 Tu 1 . - CDS 51084 - 51776 764 ## PsycPRwf_1483 hypothetical protein - Prom 51845 - 51904 8.1 - Term 51887 - 51936 11.3 47 25 Op 1 27/0.000 - CDS 51958 - 53205 1825 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 53299 - 53358 2.7 - Term 53308 - 53347 4.4 48 25 Op 2 . - CDS 53368 - 53604 403 ## COG0236 Acyl carrier protein - Prom 53787 - 53846 6.8 49 26 Op 1 4/0.050 - CDS 53894 - 56527 2285 ## COG3587 Restriction endonuclease 50 26 Op 2 . - CDS 56597 - 58546 924 ## COG2189 Adenine specific DNA methylase Mod - Prom 58583 - 58642 3.4 - Term 58592 - 58649 13.3 51 27 Tu 1 . - CDS 58719 - 60734 1943 ## COG1505 Serine proteases of the peptidase family S9A - Prom 60761 - 60820 6.0 - Term 60779 - 60820 12.0 52 28 Tu 1 . - CDS 60837 - 62894 2425 ## COG0855 Polyphosphate kinase - Prom 62924 - 62983 5.8 + Prom 63005 - 63064 5.5 53 29 Tu 1 . + CDS 63103 - 63891 1303 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 63909 - 63943 6.2 + Prom 64229 - 64288 7.5 54 30 Tu 1 . + CDS 64340 - 64783 880 ## COG1970 Large-conductance mechanosensitive channel + Term 64816 - 64854 10.2 - Term 64984 - 65020 3.1 55 31 Tu 1 . - CDS 65041 - 67926 3773 ## COG1530 Ribonucleases G and E - Prom 68045 - 68104 2.2 + Prom 68310 - 68369 4.8 56 32 Op 1 3/0.100 + CDS 68451 - 69437 211 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 57 32 Op 2 . + CDS 69448 - 70098 1061 ## COG0546 Predicted phosphatases + Term 70124 - 70165 10.0 - Term 70102 - 70157 4.4 58 33 Tu 1 . - CDS 70164 - 70961 416 ## COG1793 ATP-dependent DNA ligase - Prom 71013 - 71072 7.8 59 34 Op 1 . - CDS 71074 - 71256 205 ## COG2801 Transposase and inactivated derivatives 60 34 Op 2 . - CDS 71327 - 71614 403 ## gi|255067163|ref|ZP_05319018.1| transposase 61 35 Tu 1 . - CDS 71717 - 73756 2580 ## COG5563 Predicted integral membrane proteins containing uncharacterized repeats - Prom 73883 - 73942 5.7 - Term 73790 - 73819 3.5 62 36 Tu 1 . - CDS 74010 - 74651 909 ## COG1045 Serine acetyltransferase + Prom 74753 - 74812 4.0 63 37 Tu 1 . + CDS 74934 - 75572 678 ## COG0491 Zn-dependent hydrolases, including glyoxylases 64 38 Op 1 . + CDS 76032 - 76553 991 ## COG2913 Small protein A (tmRNA-binding) 65 38 Op 2 . + CDS 76562 - 76990 338 ## NMC0324 putative periplasmic protein + Term 77006 - 77056 10.1 66 39 Op 1 . + CDS 77066 - 77296 161 ## gi|241758934|ref|ZP_04757046.1| hypothetical protein NEIFL0001_2160 67 39 Op 2 . + CDS 77293 - 77757 505 ## NGK_2099 hypothetical protein + Term 77766 - 77813 13.0 - Term 77758 - 77794 8.0 68 40 Tu 1 . - CDS 77812 - 78345 540 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 78478 - 78537 7.0 + Prom 78402 - 78461 4.8 69 41 Op 1 . + CDS 78627 - 78842 393 ## PROTEIN SUPPORTED gi|225077118|ref|ZP_03720317.1| hypothetical protein NEIFLAOT_02171 + Term 78861 - 78889 -0.1 + Prom 78902 - 78961 2.2 70 41 Op 2 . + CDS 79078 - 80736 2297 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family + Term 80788 - 80835 10.8 + Prom 80760 - 80819 3.9 71 42 Tu 1 . + CDS 80855 - 81772 1401 ## NT05HA_0643 hypothetical protein + Term 81779 - 81812 1.1 + Prom 81902 - 81961 5.5 72 43 Op 1 23/0.000 + CDS 81995 - 82795 300 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 73 43 Op 2 16/0.000 + CDS 82861 - 83637 1199 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 74 43 Op 3 13/0.000 + CDS 83687 - 84181 756 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 75 43 Op 4 10/0.000 + CDS 84214 - 84804 1084 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 76 43 Op 5 3/0.100 + CDS 84868 - 85146 453 ## COG3113 Predicted NTP binding protein (contains STAS domain) 77 43 Op 6 . + CDS 85143 - 85970 1187 ## COG2853 Surface lipoprotein + Term 85989 - 86021 5.6 + Prom 86003 - 86062 3.6 78 44 Op 1 . + CDS 86085 - 86447 677 ## NGK_2595 VacJ-related protein 79 44 Op 2 3/0.100 + CDS 86447 - 86830 619 ## COG0824 Predicted thioesterase 80 44 Op 3 . + CDS 86827 - 87315 569 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 87322 - 87381 3.8 81 45 Tu 1 . + CDS 87459 - 88607 884 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 + Prom 88614 - 88673 4.2 82 46 Op 1 . + CDS 88760 - 89365 357 ## XCC3622 hypothetical protein 83 46 Op 2 . + CDS 89368 - 90582 354 ## Smal_2435 putative lipase + Prom 90646 - 90705 6.1 84 46 Op 3 . + CDS 90726 - 92159 2028 ## COG0215 Cysteinyl-tRNA synthetase + Term 92360 - 92420 21.0 - Term 92408 - 92439 3.6 85 47 Op 1 2/0.100 - CDS 92462 - 93067 815 ## COG3560 Predicted oxidoreductase related to nitroreductase 86 47 Op 2 . - CDS 93083 - 93478 450 ## COG2259 Predicted membrane protein - Prom 93567 - 93626 3.6 + Prom 93518 - 93577 7.5 87 48 Tu 1 . + CDS 93606 - 94496 1251 ## COG0583 Transcriptional regulator + Term 94504 - 94543 10.0 - Term 94488 - 94536 11.5 88 49 Tu 1 . - CDS 94554 - 94895 364 ## gi|241758984|ref|ZP_04757096.1| hypothetical protein NEIFL0001_2185 - Prom 94934 - 94993 4.0 - Term 95035 - 95077 8.1 89 50 Op 1 . - CDS 95096 - 97369 218 ## PROTEIN SUPPORTED gi|22537308|ref|NP_688159.1| 30S ribosomal protein S1 - Term 95035 - 95077 8.1 90 50 Op 2 . - CDS 95096 - 97369 171 ## PROTEIN SUPPORTED gi|227431694|ref|ZP_03913724.1| ribosomal protein S1 91 50 Op 3 . - CDS 97468 - 100281 3456 ## COG1002 Type II restriction enzyme, methylase subunits 92 50 Op 4 . - CDS 100324 - 101181 452 ## COG2801 Transposase and inactivated derivatives + Prom 101051 - 101110 3.5 93 51 Op 1 . + CDS 101268 - 101357 84 ## 94 51 Op 2 2/0.100 + CDS 101406 - 101951 524 ## COG1087 UDP-glucose 4-epimerase + Term 102019 - 102061 10.2 + Prom 102034 - 102093 9.1 95 52 Op 1 16/0.000 + CDS 102120 - 103187 1300 ## COG1088 dTDP-D-glucose 4,6-dehydratase 96 52 Op 2 13/0.000 + CDS 103261 - 104127 1404 ## COG1209 dTDP-glucose pyrophosphorylase + Term 104135 - 104172 8.7 97 52 Op 3 2/0.100 + CDS 104181 - 104720 823 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Prom 104730 - 104789 2.2 98 53 Op 1 . + CDS 104816 - 105121 82 ## COG3563 Capsule polysaccharide export protein 99 53 Op 2 . + CDS 105109 - 106254 1040 ## COG3563 Capsule polysaccharide export protein + Term 106323 - 106363 3.4 100 54 Op 1 5/0.050 - CDS 106318 - 106659 238 ## COG3039 Transposase and inactivated derivatives, IS5 family 101 54 Op 2 5/0.050 - CDS 106644 - 107120 608 ## COG3039 Transposase and inactivated derivatives, IS5 family 102 54 Op 3 . - CDS 107036 - 107323 104 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 107344 - 107403 3.3 103 55 Op 1 11/0.000 - CDS 107409 - 109175 2770 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 104 55 Op 2 . - CDS 109289 - 111067 2539 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) 105 55 Op 3 . - CDS 111149 - 111364 131 ## gi|241759038|ref|ZP_04757150.1| hypothetical protein NEIFL0001_2199 106 55 Op 4 18/0.000 - CDS 111381 - 112709 2067 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 107 55 Op 5 4/0.050 - CDS 113009 - 113929 1384 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 108 56 Op 1 4/0.050 - CDS 114078 - 114857 1188 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 109 56 Op 2 . - CDS 114869 - 116314 1491 ## COG0007 Uroporphyrinogen-III methylase - Prom 116398 - 116457 6.2 - Term 116793 - 116826 -0.3 110 57 Tu 1 5/0.050 - CDS 116898 - 117287 258 ## COG3039 Transposase and inactivated derivatives, IS5 family - Term 117302 - 117355 2.0 111 58 Op 1 5/0.050 - CDS 117360 - 117806 485 ## COG3039 Transposase and inactivated derivatives, IS5 family 112 58 Op 2 . - CDS 117722 - 118009 155 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 118030 - 118089 3.7 113 59 Tu 1 . + CDS 118076 - 118297 248 ## COG3562 Capsule polysaccharide export protein + Prom 118381 - 118440 7.9 114 60 Op 1 . + CDS 118665 - 120071 1795 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Prom 120073 - 120132 5.7 115 60 Op 2 . + CDS 120289 - 121503 2100 ## COG0786 Na+/glutamate symporter + Term 121522 - 121564 5.1 + Prom 121511 - 121570 5.0 116 61 Op 1 . + CDS 121609 - 122631 1479 ## NMO_1941 hypothetical protein 117 61 Op 2 . + CDS 122686 - 123681 1471 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 123697 - 123743 11.1 - Term 123764 - 123798 2.1 118 62 Tu 1 . - CDS 123866 - 124870 461 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 - Prom 124929 - 124988 3.6 - Term 124944 - 125003 16.1 119 63 Tu 1 . - CDS 125021 - 125557 821 ## COG3038 Cytochrome B561 - Prom 125596 - 125655 3.4 + Prom 125710 - 125769 5.0 120 64 Tu 1 . + CDS 125791 - 127320 1171 ## COG1178 ABC-type Fe3+ transport system, permease component + Prom 127351 - 127410 4.8 121 65 Op 1 2/0.100 + CDS 127435 - 127998 838 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 122 65 Op 2 9/0.000 + CDS 128057 - 128485 792 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 123 65 Op 3 25/0.000 + CDS 128530 - 128799 596 ## COG1925 Phosphotransferase system, HPr-related proteins 124 65 Op 4 . + CDS 128799 - 130562 2708 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 130574 - 130609 4.1 + Prom 130983 - 131042 6.8 125 66 Op 1 33/0.000 + CDS 131079 - 132194 1725 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 132206 - 132256 10.4 126 66 Op 2 35/0.000 + CDS 132283 - 133329 1217 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 127 66 Op 3 1/0.250 + CDS 133340 - 134107 301 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 134194 - 134253 2.8 128 66 Op 4 . + CDS 134278 - 134709 800 ## COG3794 Plastocyanin + Term 134732 - 134771 9.1 + Prom 134766 - 134825 2.2 129 67 Op 1 . + CDS 134848 - 136113 1574 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 130 67 Op 2 . + CDS 136152 - 136958 511 ## COG2801 Transposase and inactivated derivatives + Term 137027 - 137073 2.1 - Term 136995 - 137031 6.4 131 68 Tu 1 . - CDS 137064 - 137156 108 ## - Prom 137230 - 137289 6.2 132 69 Tu 1 . + CDS 137424 - 137643 295 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|241320724|gb|ACQV01000010.1| GENE 1 88 - 1530 1895 480 aa, chain - ## HITS:1 COG:NMB2066 KEGG:ns NR:ns ## COG: NMB2066 COG0312 # Protein_GI_number: 15677888 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Neisseria meningitidis MC58 # 1 480 1 480 480 856 92.0 0 MQQTYAAVQRDLLEANHLSPDLLAQSLSIIGANHVDYADIYCQRTAYESWHLEEGIVKSG SFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSAKAVRVIGAAGGEASVKVPTPAYGKP VHMAIDPIASLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMVYIARLDGKHAAD IRPMVRMNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPA PAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIA DRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRM TNTFMENGGYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVK GATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI >gi|241320724|gb|ACQV01000010.1| GENE 2 1879 - 2295 206 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758990|ref|ZP_04757102.1| ## NR: gi|241758990|ref|ZP_04757102.1| conserved hypothetical protein [Neisseria flavescens SK114] # 58 138 1 81 81 167 98.0 1e-40 MTLVYVNTDTTVIVAHLVTVNKDNLRKLSTSMFLQNTELGQLTLKLVFQVGHSRWIHLLL PQREAIKTCELGGKNKPCKIYAWVRNGCLAVAQDQNGTIFFGSTTPGLAEAEALEKCQRN RKAQCKIIATEGCSMPKF >gi|241320724|gb|ACQV01000010.1| GENE 3 2669 - 3511 1185 280 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0113 NR:ns ## KEGG: NMCC_0113 # Name: not_defined # Def: periplasmic protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 280 1 274 274 177 45.0 4e-43 MKWLFAVLVALNIIVFGSMVAYRTQHKTAKPESALEGGTHELLRPSSLGAPKAEPQQASQ PDWVVVESDGLIMAEPESEEAEALRKKQEAQQLKEKKEKMRREKEAQERRAAEEEMGAAG VERLCTSSATVVMDEDDYHRIKGLLGKWPHAASRSIEKRNGASGGETSSKTFRVVLPADG DTSAQLDALGSRGFSGSIHNGEISIDVTRSRSSAQVLISRLSSAGFGGARIVEQEDRSAP DTGLSVARMTVVFMAVDERDAQDIRNIVGRYGKLNMKTCR >gi|241320724|gb|ACQV01000010.1| GENE 4 3527 - 5287 1333 586 aa, chain - ## HITS:1 COG:NMA0357_1 KEGG:ns NR:ns ## COG: NMA0357_1 COG0340 # Protein_GI_number: 15793366 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Neisseria meningitidis Z2491 # 1 326 1 327 338 451 66.0 1e-126 MTDLNSRHWVLLAALSDGLPQHVSQLARVVGMKPQQLNGFWQQMPGHIRGLLRQHDGQWR LVRPLAVFAEESLQQMAGKQGFRAQLKHECSSSNDEIMALARQSADLAHKALCVAHFQTK GRGRQGRSWVNRQGECLMFSLGWTFDKPQYELGSLALVVALACRRALADIGLDVNIKWPN DLVVANDKLAGILIETARVENKTVAIIGIGINFVLPKEVENATSVQALFQTASKQGVSVK TLLNAVLAQLDALLSEYAQNGFASCVGEYDAANRDTDRPVLLLQEGRVVHEGVVKGVDAQ GALRLLTDKGEKTIVSGEISLRPDNRLAQPAAAKPERFLLLDGGNSQLKWAWVENGTFSE VGRAPYRDLTQLGEEWLQFADDDVKIVGCAVCGSVKKAMVEEQLTRPVEWLSSMPQALGI RNHYRRPEEHGSDRWFNALGSRRFTQNACVVVSCGTAITTDALTEDNHYLGGTIMPGFHL MKEAMALKTANLNRPIGKVYPFPTTTPNAIASGMMDAVCGALMMMHGRLKDKMGGGKPVD IIITGGGAGRVVQALPESFVHDNQVKIVDNLVIHGLLHWIAHRNGQ >gi|241320724|gb|ACQV01000010.1| GENE 5 5284 - 5787 570 167 aa, chain - ## HITS:1 COG:NMA0356 KEGG:ns NR:ns ## COG: NMA0356 COG2870 # Protein_GI_number: 15793365 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 4 167 5 168 168 253 85.0 1e-67 MSEWPAPEFESKICPPEKLAERLAALPRPLVFTNGCFDILHRGHVTYLAQARSAGAALVL ALNTDASVCRQGKGDDRPINPLENRAAVAAALASVDLVTWFDDDTPAALIEMVKPDVLIK GGDWPVDKIVGAAETFARGGKVFSIPFLHQTSTTKTLAKIREAGGGE >gi|241320724|gb|ACQV01000010.1| GENE 6 6517 - 7368 1122 283 aa, chain + ## HITS:1 COG:NMA0354 KEGG:ns NR:ns ## COG: NMA0354 COG0190 # Protein_GI_number: 15793364 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 1 283 1 283 284 468 83.0 1e-132 MAAQLIDGKKISQQRIEAVAQAVKARQEKGLHTPCLAVVLVGDDPASAVYVRNKKLTCQK SGIESRSYELPSETTQDDLLKLVDELNSDPAVDGILVQLPLPAHIDSQAVLERIEPHKDV DGFHPYNVGRLVVKMPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELL LSRATVTICHSATQNLADEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDDGSL CGDVEFDVAKERASMITPVPGGVGPMTIATLLENTVHAASLHD >gi|241320724|gb|ACQV01000010.1| GENE 7 7453 - 8526 1361 357 aa, chain + ## HITS:1 COG:RSp0411 KEGG:ns NR:ns ## COG: RSp0411 COG0628 # Protein_GI_number: 17548632 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Ralstonia solanacearum # 1 357 1 340 341 190 36.0 3e-48 MSLLSSHTDNPTFRNASYILMGLALLIVLHYHFLPLLLSVILTYIFITRTNGVILKLRRR VLPRNTRLHKSLNAHNINLISTTLTLTIVFSIITMMSLGIYHLIHGGHVGFMLAKLAAIL EDTKNSQDLPAAILNMLPNNMAEIKASAIKLIEEYRAALTRISKNSITSFVYILIGIIIG AMLSFHRLKMRKNRHKMPLFKAELMRRIVNFETSFERVFLAQVKISLIDTFLTGLYLYLV LPLFGVDLPFKMTVLIVAFIVGLIPVAGNLISNTIIIILSLGASLYVALASLVFLVVIHK LEYFLNAKIIGSEIESSAWELLVAMVVFERIFGIGGIIVAPVYYAYLKNELKLRKLI >gi|241320724|gb|ACQV01000010.1| GENE 8 8656 - 9897 1949 413 aa, chain + ## HITS:1 COG:NMA0409 KEGG:ns NR:ns ## COG: NMA0409 COG0814 # Protein_GI_number: 15793414 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Neisseria meningitidis Z2491 # 1 413 1 413 413 692 93.0 0 MSTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLIVLLYTWFSMLSSGLMILEV NTHYPHGASFDTMVKDLLGPTWNVINGVAVAFVLYLLTYAYIFVGGDLTAKGIGSAVGGE ISLTVGQLVFFSILAFCVWASARLVDRFTSILIGGMVLTFIWATGGLIADAKMPVLFDTQ APAGTSYWIYVATALPVCLASFGFHGNVSSLLKYFKGDAPKVAKSLWSGTLIALVIYVLW QIAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQTGNMDKVLTLFSYMAIATSFLGVTL GLFDYIADIFKWNDSISGRTKTAALTFLPPLISCLLFPTGFVTAIGYVGLAATIWTGIIP AMLLYRSRHKFGIGKNYKVYGGFWLMVWVFLFGIINIAAQILSQMELVPVFKG >gi|241320724|gb|ACQV01000010.1| GENE 9 9991 - 10464 680 157 aa, chain + ## HITS:1 COG:no KEGG:PSPTO_2613 NR:ns ## KEGG: PSPTO_2613 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae # Pathway: not_defined # 2 149 45 188 191 71 27.0 1e-11 MYDNIRFHLDEDYPDQLPPENAATHIGMYWQWAAQAGLVNPVWQTAPETAADFSAMTSGK ISGRHFLLKHMDGALTEDDFTELGQRFTEFYYTDEEDGYGAFMEDYVLALDTPSLGGFYH VKSTPGTFAKLTPVFQTAFEKWKSSLKVEKYSKESTQ >gi|241320724|gb|ACQV01000010.1| GENE 10 10461 - 11522 446 353 aa, chain + ## HITS:1 COG:MJ1607 KEGG:ns NR:ns ## COG: MJ1607 COG0438 # Protein_GI_number: 15669803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Methanococcus jannaschii # 139 317 152 348 390 70 27.0 3e-12 MKPNYSIDIAINCFRPGGGMESYTFDLVRGLSAHGIKPTVFAAQIDTTVPEYRQVDTHHV NQKKIPKKLRPFFFSMQLAKLRQNRNIPLIACNPSDYADIFVCGGTHLGYLHNMGKTPNL LDRLIIRRNRTNYLTAKLIMAHSHLMQHELINLYGVPSEKIRVIHPPADTARFYTKSEEI PATRARYGFKDDETIFLFPSTGHTRKGLDLLAEFFEHTDLPIKLAVAGSPLPRPMNNVIE LGFCKNMPELYRAADFTIMASLYEPFGLVGIESILCGTRVVFSDNMACTEVMNENAGFFF SRQNPETLAQAITQAVSLKRQGKHKITAPMQALTYNPTLTHHIDQTLNMLKAV >gi|241320724|gb|ACQV01000010.1| GENE 11 11543 - 12121 937 192 aa, chain + ## HITS:1 COG:NMB2033 KEGG:ns NR:ns ## COG: NMB2033 COG0241 # Protein_GI_number: 15677856 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Neisseria meningitidis MC58 # 1 182 1 182 187 329 85.0 2e-90 MKLIILDRDGVINQDRDDFVKSVDEWIPIEGSMDAIAFLTQAGYTIAVATNQSGIGRKYF TVQDLTEMHAKMHRLAVQAGGTIDGIWFCPHTAADNCECRKPKPGMIIDIIERFKANAAE TWLVGDSLRDLQAIDAAGGKSALVLTGKGKKTLAKHEQDLPEHTQVFNNLLAFSQYIMRE NTQIEEATQAIL >gi|241320724|gb|ACQV01000010.1| GENE 12 12193 - 12924 1238 243 aa, chain + ## HITS:1 COG:NMA0404 KEGG:ns NR:ns ## COG: NMA0404 COG0204 # Protein_GI_number: 15793411 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 241 1 241 247 404 79.0 1e-113 MLIIRNLIYWFILSSSIILLFPFMLLALPFQGGAHKMAQIWVRILNWSLKHIIGLNYTLS GAENIPNHPAIICAKHQSGWETLALQEIFPPQVYVAKRELFKIPFFGWGLKLVKTIGIDR SNSREANKQLLEQGLARKNEGYWITIFPEGTRLPPGEKGRYKLGGARMAKMFEMDIVPVA LNSGEFWPRNSFLKYPGTVSVIIGKPIAHNNGNEAELMAQCEQWIESQQPLITGQGPFAP KTK >gi|241320724|gb|ACQV01000010.1| GENE 13 12989 - 13684 870 231 aa, chain + ## HITS:1 COG:NMB0226 KEGG:ns NR:ns ## COG: NMB0226 COG1451 # Protein_GI_number: 15676152 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis MC58 # 6 231 5 230 230 296 68.0 2e-80 MPRLHTHTLSDGLTIHIQLKRSAKKNLILRPVSADTVSINIPPFVTQHTFTQWLNDNEAI LRRTLNKTPARQTPTDSLPEWIWYQGVQTALSVHAANHIQIRPSEILLPEKETTAQLTHL RRFLLERAHEYLLPRLEGHIRTTRLTPSAISLSNAKTFWGVCRHTTGIRLNWRLIGAPEY VADYVCLHELAHLHHPDHSPAFWALTHSLTPHVDQAEQWLKAHGGELFHLG >gi|241320724|gb|ACQV01000010.1| GENE 14 13858 - 14229 552 123 aa, chain + ## HITS:1 COG:no KEGG:Asuc_0348 NR:ns ## KEGG: Asuc_0348 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 4 123 5 124 124 123 56.0 2e-27 MTKAKSLLATGILALFSATAFASPLPSEIYRPDGAHTIKADHQGNGEFEYEAELSGQRNS IPSLAKKVIAHARSKGFHVVESEIKHDDADLKFKRGKQELDVSIEDKGQGRIEYKADLDL DQN >gi|241320724|gb|ACQV01000010.1| GENE 15 14386 - 15861 1958 491 aa, chain + ## HITS:1 COG:no KEGG:NGO1688 NR:ns ## KEGG: NGO1688 # Name: not_defined # Def: putative outer membrane protein OmpU # Organism: N.gonorrhoeae # Pathway: not_defined # 2 491 17 489 489 528 54.0 1e-148 MKKRLLLLAILPLSLHAADVPPDVKPELQVNTAEPQQPETHNIPAEQTNRPSEKIINVDA DTLLANTELLARAMYSAVVAHNIPGIKAVLPIYEQWPKHDRAMARYAKGLLAQSEGRAAE AVGHYRRFIAEKPDASAVRWQLATALFEDKQNEAAADQFDKLQTESLPPALQERIETYRK ALRERDSWQFNAGLNITREQNINQAPGQRRLGNHLSDEQCRAVRLAYPDDDCFRGWTFPE PIDATAVHYQIGAEKKWSLPRGFYTTAGADHYGKIYPKHTNYNDLTTRFSAGIGYADQRN DIGITPFHERRFYGNDPYTYTNGVRFHYNHWWQPKLQTLSAFEAGRLKNGRREHSNNTSQ LLSNSIVYYRNARQYWVAGIDLYRERNRDDKSDSFNRYALRTTWGQEWPKGLSTVLRLSA AQRRYQAPSFFSNEQNRRDKEASASLSVWHRALHFKGITPRLTIAHNKTWSNDKFYEYGK TKMFVELSKTF >gi|241320724|gb|ACQV01000010.1| GENE 16 16154 - 17650 2370 498 aa, chain + ## HITS:1 COG:YPO2336 KEGG:ns NR:ns ## COG: YPO2336 COG0657 # Protein_GI_number: 16122560 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Yersinia pestis # 124 271 103 242 334 65 36.0 3e-10 MNALNKTLLSVSVALGLSACASVKTADTYDLDFSKQKYTEQSIEVNGQAVKFRAYEGVVY VRNPVDTRYEIINIYVPEAYYNGGEIDGFNAETAPIFLPNQIGGYMPAEPGKPALEGKRD EPEDGQKSPNAALVALSKGYVVASPGARGRTESTGKAPAAIVDLKAAVRYLKANDKAMPG DAEKIISNGTSAGGAMSALLGATADQKDYENHLKALGAAEGSDKVFAVSAYCPITDLDHA DMAYEWQFNGINDYKKMNISMLDYRVKRELVAGTLTDDEKKLSDLLKPLYPAYLNSLNLK SPEGKPLTLDAQGNGSFKNHIAGLLAQSAQIQLDAGKDLSDRKWLTVRNGKVVSVDFDAY AKAAGRQKTPPAFDGVDLSAGENQLFGTNTVDKRHFTAFSMQHNTAANAEIADEETIKIM NPLNYIGKPGVSLPQNWRIRVGTNDRDTSLAVSAVLAAKLQNNGQTVDYALPWDVGHGGD YDLDELFAWMNQVSRSAK >gi|241320724|gb|ACQV01000010.1| GENE 17 17857 - 18534 535 225 aa, chain + ## HITS:1 COG:no KEGG:Cpin_6784 NR:ns ## KEGG: Cpin_6784 # Name: not_defined # Def: hypothetical protein # Organism: C.pinensis # Pathway: not_defined # 8 225 12 235 238 165 39.0 1e-39 MRSFLHILKKIGKIALIIPIFALLYFLSAWMLASLPLNEEQPKGEFTLFLVSNGVHTDVV MPLKNDIFDWSDVVNPRDTLTADPQITHIGLGWGERNFYLYTPEWKDLTFSNALGALSGL NRTLIHVTYYPFEPQENSHVVKFLVTPEQYRNLTKSLLAGFQQENGQTILLKGIHHQAND AFYKAKGRYHLFNTCNTWLNDKLVESGLKGVYWTPFSSPLLEQYR >gi|241320724|gb|ACQV01000010.1| GENE 18 18813 - 19856 1356 347 aa, chain + ## HITS:1 COG:NMA2180 KEGG:ns NR:ns ## COG: NMA2180 COG0722 # Protein_GI_number: 15795051 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis Z2491 # 1 342 1 342 351 603 84.0 1e-172 MSQHHPTDDIKIKEVKELLPPIAHLYELPVTPQVANLVYKTRHEISDLVHGRDNRLLVII GPCSIHDTKAAVEYAQKLLPLRKKYEKELLIVMRVYFEKPRTTVGWKGLINDPHLDGTFD INYGLRQARQLLLTLNEMGMPASTEFLDMITPQYYADLISWGAIGARTTESQVHRELASG LSCPVGFKNGTDGNLKIAIDAIGAANHPHHFLSVTKAGHSAIVHTSGNPDCHAILRGGKE PNYSAEHVKDAVAQLQKAGVSSKLMVDCSHANSRKDFRKQMDVARDVAAQLKAGEENIMG VMVESHLVEGRQDKPEVYGQSITDACIGWDTTEELLALLAEAKGYQA >gi|241320724|gb|ACQV01000010.1| GENE 19 20045 - 22228 2012 727 aa, chain - ## HITS:1 COG:NMA0575 KEGG:ns NR:ns ## COG: NMA0575 COG4773 # Protein_GI_number: 15793566 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 30 727 26 724 725 330 32.0 6e-90 MSLPVFPYGKLSFAVSLALCSAYSFATEVENTQPQERVDLPTVTVQGVGKQTTSNYTIPA SSAATGIRLTQRETPQSLSVVTAKQIDDQGLDSLQDVLKQTPGVFHSKMGNNVSGHSEFI SRSQAIDSISVDGAPKFLYDGKAIRRGTNNLDSALYDQVVVVRGASGLSNGGMGEPGGTV ALERKKPTAKPAISVEAGVGSWNHYRFVLDANQPLNADNTLRSRAILVSDHGGDYLPNTS RHNHTFYGTLSYDITPQTHWRLGTEIHRFRNTGSSPFSYLTVAGNPENNQPFEPFAASPR SNSSAKWAYGKENSAEIFTSINHEFENGWTLNGNYSHTYGKSDAVSGMAGPFVINPDYSA QFVAERDQAKYTDQDFSLSLDGDYPLWGRKHEFNAGISYQYNKETPSYYKRNKDGIVPDL RLFDGNFTKPSIPYLRDGFAHMKNLSVYGSTRFKLTDRLALIGGGRLVDWQYRYSSNRNN FADSRHKNKVFIPYLGASYDLNDNLTAYTSYTTIFRPQVRNLDRNGKPLEPQRGKTYELG LKASWFEGRLNASAAAFINKRDHLSKEIYDRKNQQVYYESIDRTTTKGVELSVGGRLSDK WLLNASYAYSKLKNDSGNVVNPSYPAHLFKLFTAYDVTDRLNLGANVNWQSGTNAYDEYQ PFTAAGKEALTQRSYATLDLTTHYKIGKSTRIGLDFENVFNKRYRPMPDIHVYGTPRSVT ATVKHTF >gi|241320724|gb|ACQV01000010.1| GENE 20 22440 - 23045 892 201 aa, chain - ## HITS:1 COG:PA0949 KEGG:ns NR:ns ## COG: PA0949 COG0655 # Protein_GI_number: 15596146 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Pseudomonas aeruginosa # 8 200 6 197 198 239 66.0 2e-63 MNPNPLKILVLFYSQNGSTRNLARQIARGIESVDGCEAVLRTIPKVSTVCEAVEKDIPDE GAPYATADDLKNCAGLALGSPTRFGNMAAAMKYFIDGTIPLWLGAELVGKPATVFTSTSS LHGGQESTLLTMMLPLLHHGMVISGIPYTESALSNTQSGGTPYGASHVSGHDSKPALTAE ENDIAFAQGKRLAELARKLAD >gi|241320724|gb|ACQV01000010.1| GENE 21 23145 - 24347 942 400 aa, chain + ## HITS:1 COG:NMA0700 KEGG:ns NR:ns ## COG: NMA0700 COG1295 # Protein_GI_number: 15793680 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 398 1 405 408 602 79.0 1e-172 MPFSQWWQGFLKSKGVAFVWFVVRRFDEERVPQVAASMTFTTLLALVPVLTVMVVIASAF PVFDQWSGAFVSFINRTIVPQGADMVFDYINAFRDKATNLTAIGSVMLVVTSLMLIRTID NAFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGLSVVIGQVQVVSGSEWLRGITTVS FITLLLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAA VPFFLLWLNLLWTLVLGGAVLTSSLSYWRGEAFRRSLDARGRFDDVLKILLLLDSAQQNG KALPVQEFRRHINMGFDELGELLEKLARHGYVYSGRQGWVLKMGAESIDLAELFKLFVYR PQTLNKDKVNQTVDHIMQPCLETLNMTLAEFRAHTKKQSS >gi|241320724|gb|ACQV01000010.1| GENE 22 24447 - 26228 2681 593 aa, chain + ## HITS:1 COG:RSc1173 KEGG:ns NR:ns ## COG: RSc1173 COG4166 # Protein_GI_number: 17545892 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 30 591 40 619 625 446 42.0 1e-125 MKTPALLSLLGLIPSAAFAAHSVGLGQPPKYPANFTAFEYVNPNAPKGGTFTTPFLGAFD TLNPFTLKGNHEYGISMLTLDTLTEQSMDEPYAVYGLIAEDIALDPDGLSVTFKINPKAK FHNGDPVLAKDVAASFNILTKDKAAAPMYHFYWSDVAKVETPNDRTVVFRFKQRNSELHM ILGSLPVFSHKSYPKGLAAAPNSLPIGSGPYRFAKAENGRISEFVRDKNYWAQNLPVRKG RYNYDHIRIKYVKDEVVRIEGLKGGQYDFVQENVARNWARAYSDEVLKKRNLSKHEWVQN STAGMQGFVINMRHKPLDNIYVRRALIESFDYESVNSRIFYGAYRRTDSFFTNSTMAATG KPDSAETALLKSLGTKLPDGVLDQDVPMPPVTDPKLGVRPNLLEARALLEKGGYQYKNGK AVDKQGKPLTFEFLAPSKNYERITAKWQRDLAKIGITMNVRTADSAVYQKRMNDFDFDVT TGYYGNSESPGNEQYDYFSCAAAKTEGSRNLSGVCHPAVEKLLIHFNSFTNRQELQTTSR ALDRLIRHQYTIVPNWFADRYRVVYRNDVGIPSKLPKYYDPITFAMTAGWKKK >gi|241320724|gb|ACQV01000010.1| GENE 23 26643 - 26921 668 92 aa, chain + ## HITS:1 COG:NMB0398 KEGG:ns NR:ns ## COG: NMB0398 COG0640 # Protein_GI_number: 15676312 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis MC58 # 6 90 6 90 93 98 63.0 3e-21 MEIKRLSTILKLIANPERMAILFLLLDGDRSITELAQALDSSPTGIANHLARLRTEGIID FTRYHRIIEYRLISEEATTILNTLRTLKDQAE >gi|241320724|gb|ACQV01000010.1| GENE 24 27089 - 27859 1380 256 aa, chain + ## HITS:1 COG:NMB0399 KEGG:ns NR:ns ## COG: NMB0399 COG0708 # Protein_GI_number: 15676313 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis MC58 # 1 255 1 255 256 474 87.0 1e-134 MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATINGVRVINVYCINGEALDSPKFQYK EQWFAALTEFVRNEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLL DLGLTDGLRKIHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTVDLETRA QERPSDHAPVIAEFDC >gi|241320724|gb|ACQV01000010.1| GENE 25 28243 - 30525 1761 760 aa, chain - ## HITS:1 COG:PM2006 KEGG:ns NR:ns ## COG: PM2006 COG0457 # Protein_GI_number: 15603871 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Pasteurella multocida # 404 715 449 756 788 84 28.0 9e-16 MSVWSLINEGVELFKNKKFDKAIEKLNQALGEIEDKNSQIQEQNNAQFWLGHCYLEQAMK AQGKESEQLFGRAVEHFQQSLEFAEQLEDKQNSLQQQIYVQSWLGRCYFEQAMKAKGKES EQLFGQAFEHFKQQLRLAKQLEDKQNSLQEQINAQSWLGGCYLEQAKKAKGKESEKLLGQ AFEHFKQQLKLAEQLEDENGIQQQINAQHWLGRCYFEQAMKAKGKESEKLLGQAFEHFKQ QLKLAEQLEDENGIQQQINAQHWLGRCYFEQAKKAEGKASEQLFGQAVEHYQQQLSLAEQ LKDKQNSVQEQNNAEGWLGRCYLEQAIAIKDKKTSQAKKFSKRAEGYFLSVDNRLSQLID KSEREKLKKRINELLRNSYFLQEEKWQSYFDQKKQGIREKLFENKKDDITDAISTILAVL NIPPFELGAIPLSHYTSPSVCERLFGIVSDKTNDKADDNDPVDSNKVSPMRIGSSTYMND PTEGEGLLELLNLQDLELENKADCPVHNAFFTCFSIRVNDLNQFRLYGKENGVEASGCCL VFNQNGDWLKETDISASFGGVTNKQNEDLKEPAEIDIAGLEDENLPLYQVAYIAYYDEYI TKEKCTIWLPDTRKPKFGIRLKPVGKNLKWHKLRIKELKAALWKLMNLSKIKDEDKKALE YIRYLFKDFAFRDEEEFRLLKIEQIGSDKIEYCPTTKSVYLPYADIRDIVDEVILGTNYE KSGKERKAEVFQHLMRKYYPNVKVSRSSLPINANPPIKKD >gi|241320724|gb|ACQV01000010.1| GENE 26 30571 - 33378 4040 935 aa, chain - ## HITS:1 COG:NMA0462_2 KEGG:ns NR:ns ## COG: NMA0462_2 COG0749 # Protein_GI_number: 15793464 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Neisseria meningitidis Z2491 # 300 935 1 638 638 1142 93.0 0 MSNKPTLLLVDGSSYLYRAYHAMAQLTAPDGAPTGALYGVLNMLRRLRADYVHDYCAVVF DAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVEADDVIGTLA AMAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGEKLDIEGVKEKFGVRPDQIRDYLAL MGDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAEVKGKVGENLQAALPQLPLSYDL VTIKTDVDLHTELSDGLESLRRTSPKWSQLAVDFKRWGFRTWLKEAESRMHEAADGDLFG SDTIGEQAALDMETSSERLPEKAVAPEKLDYQAVTTEAQFAALLDKLSQADKIGIDTETT SLDAMNAALVGISIAFQAGEAVYIPVGHSLTAAPEQIDLQDVLGRLKPHLENSALKKIGQ NLKYDQHVFANYGIALNGIALNGIAGDAMLASYIIESHLGHGLDELSERWLGLETITYES LCGKGAKQIGFADVAIGQATEYAAQDADFALRLEAHLRAQMDAKQLEMYEKMELPVAQVL FEMERNGVQIDRAELARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIP TKGLKKTAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMISPKDGRV HTTYAQAVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMA HLSGDKTLIAAFQNGEDVHRRTAAEVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAK SLGIDNISAKNFIDRYFARYPGVAEYMQRTKEQAAAQGFVETLFGRRLYLPDIHNKNANA RAGAERAAINAPMQGTASDLIKRAMIDVSCWLDSDGLKTKLIMQVHDELVLEVPEAELDL VKEKLPQIMAKVDEGMLNVPLVAEVGVGMNWEEAH >gi|241320724|gb|ACQV01000010.1| GENE 27 33770 - 34195 731 141 aa, chain - ## HITS:1 COG:NMB1933 KEGG:ns NR:ns ## COG: NMB1933 COG0355 # Protein_GI_number: 15677763 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Neisseria meningitidis MC58 # 1 139 1 139 140 188 86.0 3e-48 MSTMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEAEE VLVAVSGGVLEVQPDKITVLADVAVRSTEMDQARAEAAKKAAETGVSEARDEKSLAEAHK ALAAAIAQLKTLDYLRSQKNK >gi|241320724|gb|ACQV01000010.1| GENE 28 34206 - 35603 2041 465 aa, chain - ## HITS:1 COG:NMB1934 KEGG:ns NR:ns ## COG: NMB1934 COG0055 # Protein_GI_number: 15677764 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 465 1 465 465 888 98.0 0 MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTLEVQQLLGDGVVRTIAMGSSDG LKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQTAPKFDELSS TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQA VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYD VARGVQSTLQKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSPG KYVSLRDTIAGFKAILNGEYDHLPEQAFYMVGGIEEAAEKAKTLN >gi|241320724|gb|ACQV01000010.1| GENE 29 35642 - 36517 977 291 aa, chain - ## HITS:1 COG:NMA0518 KEGG:ns NR:ns ## COG: NMA0518 COG0224 # Protein_GI_number: 15793516 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 291 1 291 291 499 90.0 1e-141 MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQDRMRLARPYAEKVRTVMSHLAQTN ADHGIKLLAPHREVRRAGFILITSDKGLCGGLNANVLKKFLAQVQEYQEQGIEVEVVCLG SKGLAACQSIGLNVIASATNLGDTPKMELLLGPLTEIFQRYEKHELDRIHMVYSRFVNTM RQEPRMEVLLPIGENVIDDEAGHSSFTWEYRYEPSPIAVLEYLVRRYLESVVYQALSDNM ASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAAITTELSEIVAGAAAV >gi|241320724|gb|ACQV01000010.1| GENE 30 36542 - 38089 2209 515 aa, chain - ## HITS:1 COG:NMB1936 KEGG:ns NR:ns ## COG: NMB1936 COG0056 # Protein_GI_number: 15677766 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 515 1 515 515 943 97.0 0 MQLNPAEISDLIKAKIENLSVDAEVRTRGTVVSVTDGIVRIHGLSDAMQGEMLEFPGNTF GLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPIDGKGP INTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGKTAVAL DAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQYIAPY SGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLER AARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLF NAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQ LQHGEVVTELMKQKQFSTLNTAEMALTLWAINNGSYADVPVSKALAFEAEFLSFVRTQHP EVLEAINASGAMSDESEKALTEAMKSFKSSYAYQA >gi|241320724|gb|ACQV01000010.1| GENE 31 38100 - 38633 686 177 aa, chain - ## HITS:1 COG:NMB1937 KEGG:ns NR:ns ## COG: NMB1937 COG0712 # Protein_GI_number: 15677767 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 225 70.0 3e-59 MAEFATIARPYAKALFSLAQEKNQIESWLGELKELAAVVQDEKVIAFIEQPETGASEKAE TLKGLVGIKNVELANFITVLAEQKRLLVLPEIYAQYQDLTLIHNNTKSAVIYSAYELSSQ QLADVTDILTKRFNSKLDVVTKVAPELIGGIKVEVGDQVLDLSVQGKLNALYATMTN >gi|241320724|gb|ACQV01000010.1| GENE 32 38638 - 39108 586 156 aa, chain - ## HITS:1 COG:NMA0515 KEGG:ns NR:ns ## COG: NMA0515 COG0711 # Protein_GI_number: 15793513 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Neisseria meningitidis Z2491 # 1 156 1 156 156 187 91.0 5e-48 MNINATLFAQILVFFGLVWFTMKFVWPPIAKALDERAAKIAEGLAAAERGKSDFEQAEKK VAELMAEGRNQVTEMVANAEKRAAKIVEEAKEQASHEAARIAAQAKADVEQEVNRAREVL REQVATLAVKGAESILRKEVDASKHADLLSALKQEL >gi|241320724|gb|ACQV01000010.1| GENE 33 39182 - 39418 474 78 aa, chain - ## HITS:1 COG:NMA0514 KEGG:ns NR:ns ## COG: NMA0514 COG0636 # Protein_GI_number: 15793512 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Neisseria meningitidis Z2491 # 1 78 1 78 78 96 97.0 1e-20 MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPLQTKLFLIAGLIDAAFL IGVAIALLFAFVNPFGAA >gi|241320724|gb|ACQV01000010.1| GENE 34 39482 - 40348 889 288 aa, chain - ## HITS:1 COG:NMA0513 KEGG:ns NR:ns ## COG: NMA0513 COG0356 # Protein_GI_number: 15793511 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Neisseria meningitidis Z2491 # 1 288 1 288 288 506 93.0 1e-143 MAGETMTAADYIKHHLQSLTSMSDVTQGQGLKNIADFSFINLDAIFFAVLLGVIGSFLLW RGAKKATAGVPGRFQAAVEILFEFVDNMCKSIIHNEQSRKAVAPLGLTLFVWIFLMNAMD MLPVDLLPMAWQGITGNHHALLRVVPTADLNTTLALAIGVLLVCIYYNIKIKGFGGWIHE LFSAPFGPMLAPANFLLNLVEFLSKTVSHGMRLFGNMYAGELVFLLIALLGGAWASTGSI ETLDPILFVFHLIAGLAWAIFHILVITLQAFIFMALAFVYIGQAHDAH >gi|241320724|gb|ACQV01000010.1| GENE 35 40966 - 41826 1438 286 aa, chain - ## HITS:1 COG:NMA0508 KEGG:ns NR:ns ## COG: NMA0508 COG1475 # Protein_GI_number: 15793507 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 283 1 283 286 442 85.0 1e-124 MAKAKGGLGRGLDSLISNAVDSSSSDRLTTVAIADIQPGRYQARVQIDDEALQELADSIK AQGIIQPVIVRERGLSQYELIAGERRWRASQLAGLTEIPVVIKTISDETALAMGLIENLQ RENLNPIEEAQGLKRLADEFGLTHETIAKAVGKSRSAISNSLRLLSLPEPVQEMLYQRRL EMGHARALLTLHVVDQLELAQKAVKNGWSVREVERRSQLAHQKAKPEAAKAISPDIRRIN DALTERLGVNAEVKTSNQKKGKIVLHFDTPETFEYLLKQLGINQEF >gi|241320724|gb|ACQV01000010.1| GENE 36 41928 - 43712 1066 594 aa, chain - ## HITS:1 COG:NMA0477_1 KEGG:ns NR:ns ## COG: NMA0477_1 COG0147 # Protein_GI_number: 15793478 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Neisseria meningitidis Z2491 # 1 386 6 391 391 664 81.0 0 MPYFALFDDALSGRAKLYQNHAESHRFYHNELDSLTSILQAGWKKGLHAVLFADYEFGLP LMDIPSGRSGSLRLHWFANCSEIDAESWLANHSDGLEAGISTPRFSVSEADYLEHIHQIH EAICRGDTYQINYTARLHLQSYGNPIQLYHRLRQPVPYAVLSCLPDGVGQEAWTLCFSPE LFLKIDSDGLITTEPMKGTAPILHDGQDELRAVELQNDPKNRAENVMIVDLLRNDLGKIA QTGKVRVPEPFKVSRFGSVWQMTSAIEAQALPDVSVADILHAAFPCGSITGAPKRMSMQI IESLESEPRGLYTGSIGFLHPCDTGLGFEGVFNVVIRTLSLKPVSDGLYQGVYGVGSGIV IDSDPEAEYRECGWKARFLNELRPDFGIFETMRVEDKQCRLLDLHLGRLNSSAQALNLTW PQNAAEQIQHYIDALPSGLFRVKAALFSDGLALSHAAVSELDGQQYVILSAHTLSQHDYL RRFKTTRREIFDQAWQTAEGQGAFDSLFFNSDGLLLEGGRSNVFVKYQGQWFTPSLDLDI LNGVMRQAVLRQSQLYLGADTIRETHITRAMLENAEEIRLSNALRGVFAVSLRK >gi|241320724|gb|ACQV01000010.1| GENE 37 43880 - 44809 1502 309 aa, chain + ## HITS:1 COG:PA0141 KEGG:ns NR:ns ## COG: PA0141 COG2326 # Protein_GI_number: 15595339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 35 302 11 277 298 429 77.0 1e-120 MADHQLEPFENVELGEKQDQLQVFEKAVLEHEGRGTDEDSSSAPLPANYPYKQRMRRSVY EKEKQKLQIELLKVQSWVKDSGQRIVSLFEGRDAAGKGGTIKRFMEHLNPRGARVVALEK PTTTERGQWYFQRYIQNLPTAGEMVFFDRSWYNRAGVERVMGFCEPNEYLLFMRQTPELE RMLVASGIHLFKFWFSVSREEQLRRFISRRDDPLKHWKLSPVDIQSLDRWDDYTEAKNAM FFHTHTGDAPWVIIRSDDKKRARLNCIRYFLHQLDYPGKDVKAIGKVDEKIVLVPDTRYK EKTVDLGHD >gi|241320724|gb|ACQV01000010.1| GENE 38 44863 - 45297 353 144 aa, chain - ## HITS:1 COG:STM3270 KEGG:ns NR:ns ## COG: STM3270 COG3787 # Protein_GI_number: 16766568 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 143 1 141 147 116 43.0 1e-26 MQTIPANIVKFLSNHHVVSIAAAEEGEVWAACCFYVFDEANARLIVLTSLKTKHGGMMSR SAKVAGTIAGQPDSIAKISGIQFAATAALIEDEADLKAAQSLYYKAHPAARVMKSNVWAL NLDSVKFTDNKLVFAQKTYWNRED >gi|241320724|gb|ACQV01000010.1| GENE 39 45349 - 45906 557 185 aa, chain - ## HITS:1 COG:NMB1945 KEGG:ns NR:ns ## COG: NMB1945 COG0163 # Protein_GI_number: 15677775 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 185 3 187 190 278 71.0 5e-75 MKRLVVGISGASGFQYGVKALQLLREHQVETHLVVSQGAEMTRALETDYTKEDVYALADV VHSVRNVGASIASGSFLTDGMLIAPCSMKTLASVAHGFADNLLSRAADVTLKERRKLVLM VREAPLNLAHIENMRRVTEMGGIVFPPVPALYQKPESIEDMITHSVSHALDLFGIIQNNV LRWQG >gi|241320724|gb|ACQV01000010.1| GENE 40 46098 - 46457 373 119 aa, chain - ## HITS:1 COG:NMA0569 KEGG:ns NR:ns ## COG: NMA0569 COG1314 # Protein_GI_number: 15793560 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Neisseria meningitidis Z2491 # 1 119 1 115 116 180 87.0 5e-46 MEAFKTLIWIINIISALAVIVLVLLQHGKGADAGATFGSGSGSAQGVFGSAGNANFLSRS TAIAATFFFATCMAMVYIHTHSSKHGLDFSDVKQTQQAPKPATPAQNNTTPVAPNPQQQ >gi|241320724|gb|ACQV01000010.1| GENE 41 46465 - 47238 1120 257 aa, chain - ## HITS:1 COG:NMB1887 KEGG:ns NR:ns ## COG: NMB1887 COG0149 # Protein_GI_number: 15677722 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Neisseria meningitidis MC58 # 1 255 1 255 257 500 96.0 1e-141 MYHQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRVMPTAERVLIGLAAPTVYLLQLHNAM QIVLNNRILTCAQDVSRFPNNGAYTGEVSAEMLADIGTDIVLIGHSERSLYFGEKNEIQR RKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSILQGLNTKNIAIAYEPVWAIGT GKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSVKADNAADIFAVPHVDGALVGGA SLSYDSFTAIINAAQAS >gi|241320724|gb|ACQV01000010.1| GENE 42 47421 - 48077 1100 218 aa, chain + ## HITS:1 COG:NMB1885 KEGG:ns NR:ns ## COG: NMB1885 COG2518 # Protein_GI_number: 15677720 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Neisseria meningitidis MC58 # 1 218 1 218 218 345 82.0 3e-95 MDFEKARFNMVEQQIRPWDVLDFDILDALEEIEREHFVGEAFQGLAYADMELPLTNGHKM LEPKVVARLAQGLKLKKDETVLEIGTGSGYATALLSKLAGKVVTDDIDAQQQQRAKKVLD ELGFTNVDYVQNNGLTEASQGAPFDAIYVGGAVDSVPEILKEQLKDGGRMVVIVGRKPVQ RALLLTRNGNEFSEKVLFDTVVAHLEDKSANPFGDFDF >gi|241320724|gb|ACQV01000010.1| GENE 43 48130 - 48459 389 109 aa, chain + ## HITS:1 COG:NMB1884 KEGG:ns NR:ns ## COG: NMB1884 COG0607 # Protein_GI_number: 15677719 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis MC58 # 3 109 2 107 107 182 79.0 2e-46 MTDIIQLSPTELKQWQNEGRAFHLLDVRTDEERAICTLPTAIHIPMNLIPLRQNELPDDD LPIVVYCHHGIRSLHTAMYLEDAGFENLYNLQGGIDAWAMQVDSKMMRY >gi|241320724|gb|ACQV01000010.1| GENE 44 48526 - 49956 1260 476 aa, chain - ## HITS:1 COG:PM0162 KEGG:ns NR:ns ## COG: PM0162 COG0531 # Protein_GI_number: 15602027 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pasteurella multocida # 1 467 1 460 470 496 61.0 1e-140 MSQKSQIGLAALTALVISSMIGSGIFSLPQNMAAVAGSQALLLGWLITGVGIIFLGLSFS ALSKLKPELDGGIYTYARDGFGDLMGFFSAWGYWLCTTVGIVGYLVVAFEAVGGFVDTPD NVIFGKGNTFAAFVGESVIVWLIYWLVVRGIKEAAGVNLIATAVKVFPLILFIGMAAYFF QTEVFMSDWTGASLATPENPDVSLMTQVKNTMLITLWVFTGIEGAAVLSKHARSRADVGR ATIIGVSLTLAMYVAITVLAQGILPRVDIAAMANPSMAGVLAHMVGPWGKVLISSCLIVS VLSSYLSWTLYATEIPHMGARNGAFPKSFIPLNKNEVPQGSLMFTTLTVQFCLLLVWLKG EDYSALLMVSTSMILIPYLLIGAYLLKLSLIQKAAAKYRLIGAAATLYAAWIVYAAGTEY LLLSVLLYLPGVLLFLYSQKKHYGSCQFNRMEKAVLVLLLILAVPAVQQFVSSLQA >gi|241320724|gb|ACQV01000010.1| GENE 45 50055 - 50942 456 295 aa, chain - ## HITS:1 COG:AGc4290 KEGG:ns NR:ns ## COG: AGc4290 COG2040 # Protein_GI_number: 15889636 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 293 5 302 306 282 51.0 5e-76 MTVTILDGGMGRELHRRGAPFRQPEWSALALMEAPDIVRETHLDFLRAGAQVVTTNSYAL VPFHIGQERFDAQAAEWARLAGRLAREAVEQSGTTAKVAASLPPLFGSYRPDLFDKQVAP DLARPLISGLMPFADIWLAETVSSLEEARFWRSSLPDDGKPFWVSFTLEDTIPHDVPVLR SGENVHEAADFAVEIGAAAMLFNCSQPEVMAEALKVAHEAQGRLKLGVYANAFEPVQGQM NEANDGLDPIRADATPENYLSWARQWADLGAEIIGGCCGIAPEHIRALARGFKAV >gi|241320724|gb|ACQV01000010.1| GENE 46 51084 - 51776 764 230 aa, chain - ## HITS:1 COG:no KEGG:PsycPRwf_1483 NR:ns ## KEGG: PsycPRwf_1483 # Name: not_defined # Def: hypothetical protein # Organism: Psychrobacter_PRwf-1 # Pathway: not_defined # 21 222 59 257 257 139 41.0 6e-32 MKTIRILALAAALAAVPVFASDFGHEQALTIDGKPAHLAETSARILANETLTAPQLVEDI TDGLGSKKIPGYKLMIMGRTYSVAAETKPPKEGQTQWRDNTFIHRGVKLFVGIPVKNGKM DLASARLINIGVVDDNGGAAPHDEGEKIRPVGKQLMSPDTKVENVKLNIAKLTLPNMKLG ETSGGGVKLEASATLDDKPIQTKIDSTFSRFYSAKPTATRPFMADARFVK >gi|241320724|gb|ACQV01000010.1| GENE 47 51958 - 53205 1825 415 aa, chain - ## HITS:1 COG:NMA0044 KEGG:ns NR:ns ## COG: NMA0044 COG0304 # Protein_GI_number: 15793076 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Neisseria meningitidis Z2491 # 1 414 1 414 415 704 91.0 0 MSQRRVVITGLGQVSPVGNDVATAWSNLLAGKSGIGRITRFDASDINSQIAGEVRDFDIG QYISAKEARRMDVFIHYGIAAALQAIDDAGLDALESLDKDRVGVNIGSGIGGLPSIEATG KAVIEGGARKINPFFIPGSLINLIAGHVTILKGYRGPSYGMVSACTTGAHSIGDSARLIK YGDADVMIAGGAEGAIGTLGVGGFAAMKALSTRNDDPATASRPWDKGRDGFVIGEGAGVL VLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNEEGPALAVTRALKDAGLNPEDVDYV NAHGTSTPLGDANETKALKLALGDHARKVIVNSTKSMTGHLLGAAGGVEALYSVLAVHEQ KSPPTINIFEQDVEAGCDLDYCANEARDAKIDVAISNSFGFGGTNGTLVFKRFKD >gi|241320724|gb|ACQV01000010.1| GENE 48 53368 - 53604 403 78 aa, chain - ## HITS:1 COG:NMA0043 KEGG:ns NR:ns ## COG: NMA0043 COG0236 # Protein_GI_number: 15793075 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 78 1 78 78 118 97.0 2e-27 MSNIEQQVKKIVAEQLGVNEAEVKNESSFQDDLGADSLDTVELVMALEEAFGCEIPDEDA EKITTVQLAIDYINAHQG >gi|241320724|gb|ACQV01000010.1| GENE 49 53894 - 56527 2285 877 aa, chain - ## HITS:1 COG:FN0417 KEGG:ns NR:ns ## COG: FN0417 COG3587 # Protein_GI_number: 19703759 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Fusobacterium nucleatum # 1 561 1 596 997 473 48.0 1e-133 MELKFEELPYQLDAVNAVANLFAGQPDHARTFDLTSQGTGRFVGNGLDLDWETLGRNLNA VQKQNGQPETEIGADRWNFSLEMETGTGKTYVYLRTVYELNRRYGWKKFVIVVPGVPIRE GVLKSLEITKAHFDGVFGRPVMRYSEYSSTRLSDLRAFAVNDHIEILVINIQSFEKDGNV INKVNESGEAPIKFIQETCPIVIIDEPQNMETEGRLNALASLNPLFTLRYSATHKKPYHK VYSLNPVQAYNLKLVKQIEVLPVLAENDVNGAFAELLEVKQAAKGRLKADLNIHYQDKKE TKKKKVSVKSGDDLFEKSGGNEAYRHGFIIDGMDFENQELAFSSGKTITRGGDGDAVRDE IMKNQIRETVREHLAKEKRLNPLGIKVLSLFFIDRVENYRAADGTAGKFALWFEEIYREL SGSPDTAGVHGGYFSQDKKGRLKNTDGTTQADNDTYRLIMRDKETLLSFGSPLRFIFSHS ALKEGWDNPNVFQICTLNETRSPLKKRQEIGRGLRIAVNQEGRRVRDEKVNVLTVVPNES YESFAANLQKEYEDECGITFAAENIKDGNKKKKQLFRKDFPLDPEFQAIWDRLKYKTRYR VHFDTEELIKQASAAVAGLPEIQKPKIRIRKAQLKQSQTYGIETVEIASRSRDMDVQWEI PDILGEIQRKTGLTRRTVYEIITQSGRLKDVAGNPQRFIDLAAEAVNRSLYALMAAGIEY EQTGEVYDQKLLADMEREGIEFYENSFTFKVGKPQKTICENYIPLDSGTEQAFAQNCEDY DAKNEGGVVFYFKLPGWFKIPTPLGNYNPDWAVVKQVQDKVYFVAETKNTGKGIQAGVDT DKLRQNEKLKIECGKRHFAALDGLEYRETDDVGSLEK >gi|241320724|gb|ACQV01000010.1| GENE 50 56597 - 58546 924 649 aa, chain - ## HITS:1 COG:HP0593 KEGG:ns NR:ns ## COG: HP0593 COG2189 # Protein_GI_number: 15645218 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Helicobacter pylori 26695 # 45 524 6 494 598 279 37.0 1e-74 MEDAIMATEPNRTEPNRTEPNRTEIIHDLENNFKQNNILKLKQLFPEVFCEDQIDFEKLK LVLGAENLAGAGERYQLDWAGKTAAYLNLQSPTSRTLVPCKEESMDFDGTQNVFIEAENL EALKILQKSYAGSVKMIYIDPPYNTGNDSFIYPDKFSESRKEYARRVGDTDDAGYLKRDG VFQGAWRKNGKDSGHYHSNWLSMMLPRLHLAKTLLREDGVIFISIDDNEQAQLKLLCDEV FGAENFVSNIIWEKRYTRSNNARMFTTLTEQIVCYRKSDNLQELKEPRNEKADSTYTNPD NDPRGVWTSVSCVNPATKEQRPNLSYEIQNPHTGEVITHPTNAWKFEHSKYLSYQEDNRL YWGKNGENKYPRLKKFLTEMDGGMVPVDLWKHDETGTTDAASKELESMIGKGIFTFPKPP SLIKRMLKIASNKKDSIILDFFTGSGTTAHAVMQLNAEDGGSRRFICVQLPEETDEKSEA RKAGFDTIAEIAKERIRRAGRQISDGLQDGSEIDTGFKVFKLAESGFKQWRQPGQADTEA LQRELSLNIDSVLSETSSENLLYELMLRMGLKLTCKVSFSDGVCFVEDEDTGGLYAFLLE RVDQGLIDAVLEKHPVKVAVLDRLFDGDDALKSNTVLQMKDAGVMFECV >gi|241320724|gb|ACQV01000010.1| GENE 51 58719 - 60734 1943 671 aa, chain - ## HITS:1 COG:NMA0579 KEGG:ns NR:ns ## COG: NMA0579 COG1505 # Protein_GI_number: 15793570 # Func_class: E Amino acid transport and metabolism # Function: Serine proteases of the peptidase family S9A # Organism: Neisseria meningitidis Z2491 # 1 671 1 671 671 1325 95.0 0 MKSYPDSYLHFENLESPETQEFAAVAHIETRARFLENDKARALSDGILAQLQDTRQIPFC QEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSVADFDELLGDDVYLGGVSH LVEKPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFPAGKNHVSWRDENSVWVCPAW DERQLTESGYPREVWLVERGKSFEESLPVYQIDKGAMMVNAWRYLDPQGSPIDLIEASDG FYTKTYLQVSSEGEAKPLNLPADCDVVGYLAGYLLLTLRKDWNRANQSYPSGALVAVKLN RGELGAAQLLFAPDETQALESVETTKRFVVASLLENVQGRLKAWRFADGKWQEAELPHLP SGALEMTDQPWGGDMVYLAASDFTTPLTLFALDLNVMELTVMRRQPQQFDSDGINVQQFW TTSADGERIPYFHVGKNATPDTPTLVYAYGGFGIPELPHYLGSVGKYWLEEGNAFVLANI RGGGEFGPRWHQAAQGISKHKSVDDLLAVVRDLSERGMSSPKHIGLQGGSNGGLITAAAF VREPQSIGALVCEVPLTDMIRYPLLSAGSSWTDEYGNPQKYEVCKRWLGELSPYHNLSDG IDYPPALITTSLSDDRVHPAHALKFYAKLRETSPQSWLYSPDGGGHTGNGTQRESADELA CVLLFLKEFLG >gi|241320724|gb|ACQV01000010.1| GENE 52 60837 - 62894 2425 685 aa, chain - ## HITS:1 COG:NMA0555 KEGG:ns NR:ns ## COG: NMA0555 COG0855 # Protein_GI_number: 15793549 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 684 1 684 685 1250 87.0 0 MPEQNRILCRELSLLAFNRRVLAQAQDTKVPLLERLRFLCIVSSNLDEFFEVRMAWLKRE NKLRPHQPLDNGKTAAETIEAVAKEAQALIREQYDLFNKVLQPALSRAGIHFYRRHKWTA AQKKWIENYFDNELLPILTPIGLDPSHPFPRPLNKSLNFAVELEGTDAFGRPSGMAIVQA PRILPRVVPMPSEICGGDAGFVFLSSILHAHVGKLFPGMKVKDCHQFRLTRDSDLTVDEE DLKNLRAAIQNELHDREYGDGVRLEVADTCPAHIYDFLLAQFKLTSAELYQVKGPVNLVR LNAVPDLVDRPDLKFPPRNAGRLKALRKNGSVFKLVKQSPILLHHPYQSFDPVVQMIREA AADPDVLAVKMTIYRTGSNSELVRALMKAALAGKQVTVVVELMARFDEANNVNWAKQLEE AGAHVVYGVFGYKVHAKMALVIRREDGVLKRYAHLGTGNYHQGTSRIYTDFGIITADEQI TADVNILFMEITGLGKPGRLNKLYQSPFTLHKMVIDRIKQETEHAKAGKPARITAKMNSL IEPSVIDALYQASAAGVQIDLIVRSMCTLRPGVKGLSENIRVRSIIGRQLEHSRVYCFHN NGADDTFISSADWMGRNFFRRIEVATPITTPELKERVIREGLEMALEDNTQAWLMQPDGS YVRTQPQDGEPAFGLQEGLWKIYGR >gi|241320724|gb|ACQV01000010.1| GENE 53 63103 - 63891 1303 262 aa, chain + ## HITS:1 COG:NMA2152 KEGG:ns NR:ns ## COG: NMA2152 COG0623 # Protein_GI_number: 15795023 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Neisseria meningitidis Z2491 # 1 260 1 260 261 473 95.0 1e-133 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELGSELV FRCDVASDDEINQVFVDLGKHWDGLDGLVHAIAFAPKEALSGDFLDSISREAFNTAHEIS AYSLPALAKAARPMMQGRNAAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGK EGIRCNGISAGPIKTLAASGIADFSKLLGHVASHNPLGRNVTTEEVGNTAAFLLSDLASG ITGEITYVDGGYSINALNDEED >gi|241320724|gb|ACQV01000010.1| GENE 54 64340 - 64783 880 147 aa, chain + ## HITS:1 COG:PM1564 KEGG:ns NR:ns ## COG: PM1564 COG1970 # Protein_GI_number: 15603429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Pasteurella multocida # 1 146 1 133 133 123 52.0 1e-28 MSIASEFKEFVMRGNVIDLAVGMVVGTAFSGIVKSLVDDVIMPPIGLLIGGVDFSNLFIT LKDGAQAAPAEGYANLAAAQAAGAVTLNIGLFINTVISFLIIAAAIFCVVKAINSVKKTE APAEEAPAEPSEEVLLLREIRDSLNKN >gi|241320724|gb|ACQV01000010.1| GENE 55 65041 - 67926 3773 961 aa, chain - ## HITS:1 COG:NMA0071 KEGG:ns NR:ns ## COG: NMA0071 COG1530 # Protein_GI_number: 15793100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis Z2491 # 1 960 4 918 919 1134 71.0 0 MLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDYGTD RHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISLAGR YLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEWDLN YLKQLWKAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAEFMS YVMPSNVGRLKLYQDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSIDVNS ARATRGSDIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVLRDA LKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHVLRI IQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHYEIN RIRIDDVEEDGEPSYKRVAEPEEDESAKPFGSEKAKASRPEPAVKGVRHTQPAPVVAEQK NGSWWDSFKAWLKRIFGGNTAAETAPVAEVAEKRTSNGDNRNGNSGNRRANNRRQNPRRN NRHDGSKVEVREVNAEAVDSKFEENKSNESRNDERKDNRRNRNRNNRRDDRNDERNRVEE VVEDVNVQEVAALVEMPSENQAEQNGNKRRRNNGRNERNRHQSAENRVEDVNVQADGEQA QVEADDNARSEEGVKNNGRQGRDRNNRQRNNRNDRRSNSKKRNIPSSAKIEQYLNITDTA DKVLFAVAHVLGLNETVEASNATLSSESNQAEPLVIVVSEPEVTSAEPFVFAIESEDEPA VAQTEGADAEQALLASAVSNVKEAISAVLSLNATTTVAPVEAPAETVATPAEAVAQAAPV AIVVPESLGDLIFVETDPQAVAAFAAQPQPEPVAKTRRSDVPKVEVEDVAVEMILVETRK D >gi|241320724|gb|ACQV01000010.1| GENE 56 68451 - 69437 211 328 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 23 309 18 279 285 85 28 9e-16 MHAIRKDSVSLIAVAEHEEGQRLDNYLIKILKGVPKSHIHRIIRAGEVRLNKKRCKPDNR IQAGDTVRIPPIRIAEKQRPSESQAAPAREFDIVYEDDALLVINKPSGIAVHGGSGVSFG VIEQIRRARPEARYLELVHRLDKDTSGLLMIAKKRSALVKLHEAIRNDHPKKIYLALGVG RLPNNRFHVKLPLFKYTGAQGEKMVRVSEDGQSAHTIFRVLNRFSDGLLHQVGLSDLTFV EATLKTGRTHQIRVHLQSQDCPIAGDERYGDYQANKRLQKLGLKRMFLHASELHLAHPLT GEKLILKTPLPQELAQFVLMLENQEKAV >gi|241320724|gb|ACQV01000010.1| GENE 57 69448 - 70098 1061 216 aa, chain + ## HITS:1 COG:NMB1830 KEGG:ns NR:ns ## COG: NMB1830 COG0546 # Protein_GI_number: 15677666 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis MC58 # 3 213 4 214 219 268 64.0 8e-72 MKPKLIIFDWDGTLADTTNPIIHTFQQSFADCGLPVPEADQIRPLIGYSLSGIIRRLAHN VSEHVQETLIETYAAHYLNPNNRNMTLFPEALPCLQRLKQQGYWLAVATGKGRSGLDRSI EQTGTQAFWLETACASEYPSKPAPDMVLALCDRLGVEPEEAVVVGDTTHDLEMAANAKIR AIAVTTGAHTAQQLSALPHVAMLNSLAELPDVLETL >gi|241320724|gb|ACQV01000010.1| GENE 58 70164 - 70961 416 265 aa, chain - ## HITS:1 COG:NMA0388 KEGG:ns NR:ns ## COG: NMA0388 COG1793 # Protein_GI_number: 15793396 # Func_class: L Replication, recombination and repair # Function: ATP-dependent DNA ligase # Organism: Neisseria meningitidis Z2491 # 1 265 9 274 274 454 81.0 1e-127 MIPIFAASFISAAFGADLLLAQEYKNQDIAGWAMSEKLDGVRAYWDGRRLVSRQGYAFTP PKGFTAGFPPFPMDGELYSGRGRFEQISATVRSASGNWDGIRLHVFDVPQAQGNLYQRLE TASKWLKSHPSARFTVIPQVKVRDKQHALDFLKQVEALGGEGVMLRQPEARYASGRNGQL LKLKSEYDDECTVTRHYEGKGRNVGRLGAVGCKNQYGEFRIGSGFKDKDRDHPPKIGALI TYRYRGFTQKGTPKFATFVRVRSDR >gi|241320724|gb|ACQV01000010.1| GENE 59 71074 - 71256 205 60 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 55 159 213 216 62 58.0 2e-10 MESFFAVLKTECFYNAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLTQSA >gi|241320724|gb|ACQV01000010.1| GENE 60 71327 - 71614 403 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 95 251 345 366 194 94.0 1e-48 MSKYILHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMT DHRKNPFIADKPDHEKTQAELIEELCYMRAKVAYL >gi|241320724|gb|ACQV01000010.1| GENE 61 71717 - 73756 2580 679 aa, chain - ## HITS:1 COG:XF2349_1 KEGG:ns NR:ns ## COG: XF2349_1 COG5563 # Protein_GI_number: 15838940 # Func_class: S Function unknown # Function: Predicted integral membrane proteins containing uncharacterized repeats # Organism: Xylella fastidiosa 9a5c # 27 398 48 461 464 173 35.0 9e-43 MQKPFSAHRLLTLAALLAALPAAAAPNNITDLGTLKNDNSGDSSAYAINSDGSMVVGYSY DDRDGQATVWSGSGWGTKTKLGTLRADNSGGGVAIAASDDGSVVVGVASTDDDYYLTQAV VWSGSNWGTKTALGTLKADNSDLSSANAVSRDGSVVAGVARNDNYEERAVVWSGSNWGTK TDLGTLRTDNSGFSSADAISQDGSVVVGSSRWDSLRGRHATVWSGSNWGTKTDLGTLKSD NSGESRADAISQDGSVVGGFAENDNGDSHATVWSGSNWATKTDLGTLKADNSGNSWVKAA SSDGSVVGGVADNDNGERHATVWSGSNWSTKTDLGTLKSDNSGHSEVQGLSADGNFAVGE AENDNGNYRRAVVWNLRGGRAADTANTRASLSLLSADTAAMLVQRARAAENLLGGCRADG GKFCYSAGYRRDIGHGASSRGADFAFGYGFTDNFDAAVSLAVPARAEENGSHRLKSGVGI GLSARLHNGAGWYAVPAAAFETDKTRIRRPHLNGTESPENTVRTKGRAYSLTAGRDYGTS GEKTLGWYAALRRTEAERPSYSEDASLSFPFAYGAAKLKETSLAAGIKGRLPLTGKLAWY GNAEVAQRVGGGKARFTASAPFFGAFEEACETTRTRPSVQTGVDYAFSPSAVLSLGGYVG RNAFSGTDKGIFLKLNGKF >gi|241320724|gb|ACQV01000010.1| GENE 62 74010 - 74651 909 213 aa, chain - ## HITS:1 COG:NMA0742 KEGG:ns NR:ns ## COG: NMA0742 COG1045 # Protein_GI_number: 15793718 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Neisseria meningitidis Z2491 # 1 202 62 262 272 306 73.0 2e-83 MDMRTLYEFYLHALGKEPSIVEAVRADITAYYERDPACDQYCLPLLYFKGYHAIQAHRIN HCLWKEGRKTLAYFLQNRASEVFGVDIHPAARFGQGIMIDHGTGVVIGETAVLGNDISIL HGVTLGGSGKEGGDRHPKIGDGVMIGANASVLGNIRVNECAKIGAGSVVVADVPAYSTVV GVPARVVGNKSQAKPAEEMNQNFYEEMNQDFYI >gi|241320724|gb|ACQV01000010.1| GENE 63 74934 - 75572 678 212 aa, chain + ## HITS:1 COG:NMB2049 KEGG:ns NR:ns ## COG: NMB2049 COG0491 # Protein_GI_number: 15677871 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis MC58 # 1 210 1 210 210 355 79.0 3e-98 MALQFEINAVTPFRQNCTLIWDDETKEAVLTDVGGDVPYLLQQVQNKGLKLTAIWLTHGH LDHAGGVVELLKTCDIPVLGPHKDDEFLLQALPQTTAQYGFPVSPSFTPTRWLEEGESLK VGNHSFQVLHIPGHTPGQVVFYNAENGLLVAGDVLFYETVGRTDFPRGNHDDLINNICAK LLTLPETTQVIAGHGRMTSIGHEKRYNPFLVR >gi|241320724|gb|ACQV01000010.1| GENE 64 76032 - 76553 991 173 aa, chain + ## HITS:1 COG:NMA0557 KEGG:ns NR:ns ## COG: NMA0557 COG2913 # Protein_GI_number: 15793551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis Z2491 # 1 173 3 171 171 241 75.0 6e-64 MKKIAKVGFVLLATGLLAACATKSKITPEGTTDEPRFPKPYSLTFNKGRGTFPTFDELDQ MRPGLTKDDIYKILGRPHYDEGMVGVREWDYLFHFYTPGVGVDPENTSGVEGITTCQYKV IFDKDKFARSFFWNPVFPKDAVCPPPAPTPKPKQEPQVIIREIIKETPKHIRQ >gi|241320724|gb|ACQV01000010.1| GENE 65 76562 - 76990 338 142 aa, chain + ## HITS:1 COG:no KEGG:NMC0324 NR:ns ## KEGG: NMC0324 # Name: not_defined # Def: putative periplasmic protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 4 142 9 147 147 201 66.0 7e-51 MKRILLGIALAAGLNSLAAADAVSDCIQRKKVVVNTAKAELCFADDGQCHPVLIGKTTPK GKFNMTPMMTSKPGYGGEVIGFKEENDFLFALHRVWTLKPQERRMERIVSPHVADRIITN GCINVQSHVYEKLRQYFILEII >gi|241320724|gb|ACQV01000010.1| GENE 66 77066 - 77296 161 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241758934|ref|ZP_04757046.1| ## NR: gi|241758934|ref|ZP_04757046.1| hypothetical protein NEIFL0001_2160 [Neisseria flavescens SK114] # 7 76 1 70 70 114 100.0 1e-24 MFGYIDMVLDSAATLLKLLTQEKKTTSTYRVNLKERPPKSLGSLYCLQTKNMLTYCYRID LIIRNIISQSKKDSIL >gi|241320724|gb|ACQV01000010.1| GENE 67 77293 - 77757 505 154 aa, chain + ## HITS:1 COG:no KEGG:NGK_2099 NR:ns ## KEGG: NGK_2099 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 42 154 39 151 151 113 69.0 2e-24 MNRRQFIGSAAAVSLTAAASFARAHDHAGHAHHAGHAGHAHSAPRAYEAARKAAAHCVEA GQICLAHCIALLSEGDTSMKDCAAGANQMLALCGTLQNLAAQNSRLTPSLAKVCIEACKQ CAAACKEHAGHHAECKACYESCLACIKECQKIAA >gi|241320724|gb|ACQV01000010.1| GENE 68 77812 - 78345 540 177 aa, chain - ## HITS:1 COG:NMA0494 KEGG:ns NR:ns ## COG: NMA0494 COG0110 # Protein_GI_number: 15793493 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Neisseria meningitidis Z2491 # 1 168 2 167 170 215 60.0 3e-56 MWKRILTCILRVWGGMLPPSYCKPFGRIAQKFRAALAACISPNIGKNVNIEKGGYVFPDT VVGDNSGIGVNCEICHGLTLGKNVMMGPECLFYSINHKFNPETRRFEGYTDISPIVIEDD VWIGRRAIIMGGVTIGKGAVIGAGSVVTRDVPPYCVAAGNPAIVRKKLLDEQEFAAE >gi|241320724|gb|ACQV01000010.1| GENE 69 78627 - 78842 393 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225077118|ref|ZP_03720317.1| hypothetical protein NEIFLAOT_02171 [Neisseria flavescens NRL30031/H210] # 1 71 1 71 71 155 100 7e-37 MKQGIHPNYHEINVTCSCGNKFVTKSAMEKDSFNVEVCSLCHPFYTGTQKIVDTTGRVDK FNNKFGNLFKR >gi|241320724|gb|ACQV01000010.1| GENE 70 79078 - 80736 2297 552 aa, chain + ## HITS:1 COG:NMA0497 KEGG:ns NR:ns ## COG: NMA0497 COG1807 # Protein_GI_number: 15793496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Neisseria meningitidis Z2491 # 1 550 1 550 558 710 68.0 0 MLTYTPPDPRRPQKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAEPSLFTASESMKNGGSL LIAQIFGQPDFTISPAFLWAATAFQTLFSPWAADAYDAARFAGVVFTAIGLTACGFAGFN FLGRHHGRSVVLILIGSIGLLPIAHFLNPMSAAFAAFGLILCGFSLAHRRVIIAILLLCG GWVLLSLSSGYLLTAAMMFLALALSFHSTWQSKRYLLTLIGAIVVSLPLLILYPLVLSKT NPEWFDIWFNHYSLGVFGGFHQIQTAFNLPYYLKNLLWFTLPAWPLAAWTLSRTRIHDKN WGILSLSWLVIMTALLAINPQRLQDNLVWLLPPLALLGAAQLDGLRRGAAAFINWFGIMA FGLIAVFLWLGFFAMNYGWPAKLAERAAYFSPYYIPDIDPIPMAVALLFTPLWLWAITRK NIRGRQAVTNWAAGVTLAWALLMTLFLPWLNAAKSHAPVVHQMEAALSSELKQKLSDGLE CISIDGQDQRTRIAWTQYSHIKTTTDNPSCRYRLIRQAANVGAPSGWQTLWQGARPRNKA ETFLLLEKTAAQ >gi|241320724|gb|ACQV01000010.1| GENE 71 80855 - 81772 1401 305 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_0643 NR:ns ## KEGG: NT05HA_0643 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 15 304 7 296 298 399 68.0 1e-110 MALFPYLPKNMKPNRLLPLVLLLTALSAHAKDFIIYDRMDYVGKPDLTADKLSKVFLVYE SELVKPDPTGKRKHGVLNEERIRELAKQSRREGYRTISTDIESWFAEKDGQLLTPDELRT DFARMYQIFREENPRAVISNYGMPSEHLHGIRHYRPNVDNEAILAKWQQVSKRRAPTAAI SDYANPVFYITSPDLVQWEKDVKTAVDDIHQRFPNKKIIGYIWPQYYSATNSPYFKQFID PIRWRKMLEISKKYTDGVIIWSDKRDENNQIVRWNDPRIQATMKATQAFINANTKEIKVE GLQKY >gi|241320724|gb|ACQV01000010.1| GENE 72 81995 - 82795 300 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 236 2 230 245 120 31 5e-26 MSSTPFIEMKDVAFAYGDRPILNNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIHPQS GKVLIEGRDLAAFSAQELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTDLPEAVIR DLVVLKLNAVGLRGIENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGV IAHLISRANKALRSTSVMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPEEMRELDSPWVRQ FVGGLADGPVAYRYPAQTTLKQDLLG >gi|241320724|gb|ACQV01000010.1| GENE 73 82861 - 83637 1199 258 aa, chain + ## HITS:1 COG:NMA0486 KEGG:ns NR:ns ## COG: NMA0486 COG0767 # Protein_GI_number: 15793485 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 419 94.0 1e-117 MNFIRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARPRLSIRQVYFAGVLSVLIVAVS GLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGL MKTTEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDG GIFWSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSS ALTILAVDFMLTAWMFTD >gi|241320724|gb|ACQV01000010.1| GENE 74 83687 - 84181 756 164 aa, chain + ## HITS:1 COG:NMA0487 KEGG:ns NR:ns ## COG: NMA0487 COG1463 # Protein_GI_number: 15793486 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 164 232 83.0 2e-61 MKKNALEFWVGLFVLLGAAAIGFLAFRAAGGQSFGKSSQTYTVYADFSDIGGLKTNAPVK SAGVLVGRVASIQLDPKSYQAKVALNLDSQYQFSSDVSAQILTSGLLGEQYIGLQQGGDT DSLAAGDTITVTSSAMVLENLIGKFMTSFAEKNADSESAGQNEQ >gi|241320724|gb|ACQV01000010.1| GENE 75 84214 - 84804 1084 196 aa, chain + ## HITS:1 COG:NMA0488 KEGG:ns NR:ns ## COG: NMA0488 COG2854 # Protein_GI_number: 15793487 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 318 85.0 5e-87 MKKTSFISALSIGVLSISMAFASPADAVNQVRENSVQVLKILNSGDANTARQKAETYAIP YFDFQRMTALAVGNPWRTATDAQKQALTKEFQTLLIRTYSGTMLKFKNAKVNIKDNPVVN KGGKEIVVRAEINVSGQKPVNMDFTTYQSGNKYRAYNVAVEGASLVTVYRNQFGETIKAK GIDGLIADLKAKNGGK >gi|241320724|gb|ACQV01000010.1| GENE 76 84868 - 85146 453 92 aa, chain + ## HITS:1 COG:NMA0489 KEGG:ns NR:ns ## COG: NMA0489 COG3113 # Protein_GI_number: 15793488 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Neisseria meningitidis Z2491 # 1 92 9 100 100 124 67.0 3e-29 MQTEIRNGTLYISGDVTVKTLTASAFARYEQQCRLKETDRIDFSQVGKADSACVSLLLNA LRRTDKKPTIQNIPDSVRALAELYEIKDWLQS >gi|241320724|gb|ACQV01000010.1| GENE 77 85143 - 85970 1187 275 aa, chain + ## HITS:1 COG:NMB1961 KEGG:ns NR:ns ## COG: NMB1961 COG2853 # Protein_GI_number: 15677791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Neisseria meningitidis MC58 # 1 244 1 244 275 362 74.0 1e-100 MKKTTASLCLIISIASAPVLAERNPADPYEGYNRTVSKFNDKADKYVLSPVARGYRKVTP KPVRTGVSNFFNNLRDVVSFGSNVLRLDVKRASEDLVRVGINTTFGLGGLIDIAGAGGVP SNKNTLGDTFASWGWKNSNYFVVPLLGPSTVRDTVGNAVTTVYPVKNAVFHTSAGRWGTT GLQAINTREELLDLTDSLEGAAIDKYSYTRDLYMKVRSQQTGGTLPQSEDDNIDIDDLVD SNATSEPVAAPPTAPAEIPDTANPQTLYQTPSENP >gi|241320724|gb|ACQV01000010.1| GENE 78 86085 - 86447 677 120 aa, chain + ## HITS:1 COG:no KEGG:NGK_2595 NR:ns ## KEGG: NGK_2595 # Name: not_defined # Def: VacJ-related protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 120 318 437 437 241 93.0 5e-63 MYEVNRSVFLLIPLDPFWNWLKSLPGNHLDGLTLEDIQADANSYLVRPCETADEVWDEIE ARFEDIFAAELADWCEDESEWPDLDADIFNEWFDIQLSTVITDLEHEPIAREEFQPINLN >gi|241320724|gb|ACQV01000010.1| GENE 79 86447 - 86830 619 127 aa, chain + ## HITS:1 COG:NMA0492 KEGG:ns NR:ns ## COG: NMA0492 COG0824 # Protein_GI_number: 15793491 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 127 177 67.0 4e-45 MKLTVRNYHLDGYGHVNNARYLEFLEEARWTFFQEHDLLSELKGIMLVVARVDIRYRRPS LEGDVLTFTGHLKDIGTRHIILSQTATLPNGKAAIEAEVTLMPVSSESGRSISVPQTLAH AIQNLES >gi|241320724|gb|ACQV01000010.1| GENE 80 86827 - 87315 569 162 aa, chain + ## HITS:1 COG:NMA0493 KEGG:ns NR:ns ## COG: NMA0493 COG0526 # Protein_GI_number: 15793492 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 162 1 162 162 253 79.0 1e-67 MKKILTLLVVATIGTLLAFVLIPSSKAAPDFALPDLQGKTITNADLKDKVTLINFWFPSC PGCVSEMPKIIKTAQDYQGKNFQVLGIAQPIDPIESVHQYVKEYGLPFTVMYDADKTAAK AFGTQVYPTSILIDKNGNILKTYVGEPNFTQLYQEIDQALAQ >gi|241320724|gb|ACQV01000010.1| GENE 81 87459 - 88607 884 382 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 362 1 344 345 345 50 9e-94 MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGSVWAEADENTNTLVEYR FVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTDEIVADLTHHGQRVCLAKG GKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLADVGLLGMPNAGKSTLITAVS AARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLIEGAAEGAGLGHRFLKHLSRTGL LLHVVDLAPFDETVNPAEEALAIINELRKYDEELYGKPRWLVLNKLDMLDEEEAQARSAA FLEAIGWDYPKPDDRFQFDMETPRLFQISALTHQGTQELVHQINQYLTEKKRIEAEKAEA EQVEIETTEKQPKTNTEILKAE >gi|241320724|gb|ACQV01000010.1| GENE 82 88760 - 89365 357 201 aa, chain + ## HITS:1 COG:no KEGG:XCC3622 NR:ns ## KEGG: XCC3622 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris # Pathway: not_defined # 23 160 61 194 232 80 36.0 3e-14 MFDSAYDFHGLPKAESDPVVTENPKKHQKYELTVTFKNAPGKFEISRLVENYDAKNCMIT TNRAAGATAYAVYQPEFTLKKISDTVYQGEFYTDRPLNEDYFGQGVCLWENYGVSLEFKA DNNKKSTLFSAYIDDTVWKNMAEKGTTANLIYYHQKADYPIATWLDSETGLVSSGVTAEQ AQQRGIDLKDAFSIELEIRRA >gi|241320724|gb|ACQV01000010.1| GENE 83 89368 - 90582 354 404 aa, chain + ## HITS:1 COG:no KEGG:Smal_2435 NR:ns ## KEGG: Smal_2435 # Name: not_defined # Def: putative lipase # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 3 260 5 273 442 136 36.0 2e-30 MKTQNYLATADLAYKNLKEGQHIRGIDNVEYEVVKSLHTKSGYDGYVLYRKDTNELVVTH RGTWPEKNAKATDILTDLGMAVNQGNNQYPDAKKLTEIAISLTQTRYPGAVIHQSGHSLG GALAQLCGYNYGQRTETFNAYGAANLQEKQPGKQSNAQLITNHVRGMDPVSAASPHLGNV KHYLNKTEQIVLYLGGFGKLNIAPNRTWAVAITGAGYSHGLNNFKNGGLSTEDHTFALDN IQLIKEFRTEFEEEARKVGKDIKFIKDIMNDAINWGKKTLNLSENSNISEDQFARLFANE ATNSNLLAKEQDTINNLASASSATKRPQSKYDEVKGMLRGLINDTDGSYAQRVLAEHPEQ VALFDEKIRQNVALNQDRQQELVAEKSQAFQHEEQQRVFSRSFG >gi|241320724|gb|ACQV01000010.1| GENE 84 90726 - 92159 2028 477 aa, chain + ## HITS:1 COG:NMA0347 KEGG:ns NR:ns ## COG: NMA0347 COG0215 # Protein_GI_number: 15793358 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 473 227 699 699 980 97.0 0 MTTIYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYP LTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQ MIAMIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLD FVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIA QSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQY DPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENANDYTRRF YAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPIEFLQGGAVS DGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWRRGKPKN >gi|241320724|gb|ACQV01000010.1| GENE 85 92462 - 93067 815 201 aa, chain - ## HITS:1 COG:NMB0292 KEGG:ns NR:ns ## COG: NMB0292 COG3560 # Protein_GI_number: 15676214 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Neisseria meningitidis MC58 # 1 201 1 201 201 317 81.0 1e-86 MTYSVLQQAAETRRSIYALNNTLPLSNEEVTKIIEHAVLHTPSSFNSQSARVVVLFGEEH AKVWHFVEEALRAIVPAEQFEATAQKLNLFKAGAATVLFFEDQDVVKGLQEQFPSYAANF PIWADQANAMVQYAVWTTLAAAGIGANLQHYNPLPDAAIAKEWNLPESWLLRAQMVIGGI AAPAGEKAFQPVEGRLKVFGA >gi|241320724|gb|ACQV01000010.1| GENE 86 93083 - 93478 450 131 aa, chain - ## HITS:1 COG:NMA2196 KEGG:ns NR:ns ## COG: NMA2196 COG2259 # Protein_GI_number: 15795065 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 8 130 9 131 132 143 74.0 7e-35 MSALKSFQPVVLSVLRIVTAYLFLLHGTAKFFSFPMSMGGAPEGLMLVAGILEIVGGILL ILGLFTRPAAFVLSGQMAAAYFMAHASSGNVLFPLANHGESAVLFCFVFLYLAVAGGGAW ALDNVFGKDKD >gi|241320724|gb|ACQV01000010.1| GENE 87 93606 - 94496 1251 296 aa, chain + ## HITS:1 COG:NMB0290 KEGG:ns NR:ns ## COG: NMB0290 COG0583 # Protein_GI_number: 15676212 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 294 1 294 303 450 74.0 1e-126 MDTLFSLKVFRQVVQSGSFTRAADQLDISTAMASKHVSHLENTIQAKLLHRNSRNLHLTE AGEEYYRQCSYALDTLDTAAQKAAGGADTPQGMLRVTMPLWFAGGNMSAWLAEYRQRYPK VTLDLVLDNRHIDLIAEGFDLALRVSKTPSPSLIVKPLAKIEFVLLAAPDYLARHGTPDT PEAVMQHQAILPSYTNQQDQEITHRATAEKAILHLSPVIRSDNTLMIRELIKAGAGIGYQ PLWAVQQELKDGTLIQLLPDYTIWADQLNATYVDRAFLSAKVRSFIDFLNEKISEG >gi|241320724|gb|ACQV01000010.1| GENE 88 94554 - 94895 364 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241758984|ref|ZP_04757096.1| ## NR: gi|241758984|ref|ZP_04757096.1| hypothetical protein NEIFL0001_2185 [Neisseria flavescens SK114] # 1 113 1 113 113 192 100.0 7e-48 MKPVLFAALISCFSVAAYAACTDSQQQCVIYKNGNVATEGGCTVSKCQSADAQVLKWKLK NGKGVTVEIGKNGKVLVNKKPGAKANNSNASGMGLTCYAADADKREQFCSTNY >gi|241320724|gb|ACQV01000010.1| GENE 89 95096 - 97369 218 757 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22537308|ref|NP_688159.1| 30S ribosomal protein S1 [Streptococcus agalactiae 2603V/R] # 637 756 276 399 400 88 37 1e-16 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADVLLAEQPQDVEAAAQGYLNENVPDAKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVVEGKETEGEKFSDYFDHREPVRAMPSHRALAVLRGRNEGVLNIALKYQPDD TPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRAKIFLSLELEALNRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPEMGLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASAFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNKFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAVKG NRPSETRHQERRDRKPQRNDHTPTNSAMADAFAKLKR >gi|241320724|gb|ACQV01000010.1| GENE 90 95096 - 97369 171 757 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227431694|ref|ZP_03913724.1| ribosomal protein S1 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] # 531 715 91 270 396 70 28 4e-11 MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQLRQLAERLQYL RELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYLPYKPKRRTKAQIAREHGL QPLADVLLAEQPQDVEAAAQGYLNENVPDAKAALDGARAILMEQFAEDAELIGTLRDKLW NEAEIHAQVVEGKETEGEKFSDYFDHREPVRAMPSHRALAVLRGRNEGVLNIALKYQPDD TPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRAKIFLSLELEALNRLKEAADTDAIT VFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYLHQENNMLATL SRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPEMGLHKIVVSEAGASIYSASELAAR EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSQLAKSLDAVVEDCV NAVGVDVNTASAPLLARISGLNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAA GFLRINGGKEPLDASAVHPEAYPVVAKMLAQQGITAAELIGNRERVKQIKASAFTDERFG LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIG VHQDGLVHISALSNKFVQDPREVVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAVKG NRPSETRHQERRDRKPQRNDHTPTNSAMADAFAKLKR >gi|241320724|gb|ACQV01000010.1| GENE 91 97468 - 100281 3456 937 aa, chain - ## HITS:1 COG:NMA1791 KEGG:ns NR:ns ## COG: NMA1791 COG1002 # Protein_GI_number: 15794682 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Neisseria meningitidis Z2491 # 133 934 1 803 803 928 58.0 0 MTTYTYEHKYRLAAQFARRFQNEKRERAEKDTFWNEFFAIFGLDRFRTATTEYAVKHRSG HTKFADVFWAGRLLCEHKSAGKDLDAAFEQAMGYVEEIRRHNPDDVPRHIIVSDFATMKL YDLKDGTDVFFPLSDLPEHIKLRHFDFMDGITHELRQAQEQANIEAAAAVGSLYQAFRAD GSYDEHSLKQFLIRLLFCFFADDTLIFEPNQFEGYLKKYTREDGEDIGGTLNRLFAVLNT PPERRAQNMNTELRAFPYVNGKLFEEQLGEFYFNAELRELLLQCSARDWAKISPEIFGNL FQSVMDNVERRELGAHYTEEGNILKVIDGLFMDNLRERFQTACKVSGKAKRTAAIHELHQ EIGRLQFLDPACGCGNFLVVAYRELRKLEDDIIGELFAEGQLLDISTMLQTHIGQFHGIE IDEYPAQIAKVAMWLTDHQCNLRTAERFGQTRPSIPLTDSAEIINANSLHTEWPQADYIF GNPPFVGKQYQTPAQKADIQMICGIIKGFGILDYVANWYVKAARIIAQNHNVQAAFVSTN SITQGEQASVLWQYLFKQDIEIHFAHRTFQWTSQASGKAAVHCVIVGFRRPEKHSGEKYL FEYPDIKELPEKHTASNINQYLTDAPSIIINKQRKQICNELPMAFGSMPNDGGNLLLSTA EKQALITAEPLAAQYIRPFFGSEEFLNDKERWCLWFHGISETRLHHDLKQMPQTAQRIES VRQKRSESDRATTKELAATPHLFGEIRQPASGNYLIIPRVSSESRAFIPIGYVDCNTINS DANFMLPNATPYHFGILCSTMHNAFMRAVAGRLESRYRYSNTIVYNNFPFPFAPQSEGRP APAAEQKHRAAIEAAAQTVLDARAFYRREAEQEGLPPPSLADLYRPDAPFTRLHQAHRAL DKAVDAAYGYKGGHDDGSRTAFLFALYQKAAAEADKR >gi|241320724|gb|ACQV01000010.1| GENE 92 100324 - 101181 452 285 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 99 31.0 7e-21 MNMRKNTRLTLHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLSKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKVTDKR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTGHLIDPCPYLIECVYSDNGTKYKGSANH AFGVACYENGIGQKFARVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQASFSTCGVNNAVIFYKKQPALCWLR >gi|241320724|gb|ACQV01000010.1| GENE 93 101268 - 101357 84 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYYDNNVSGSLVLAEEMVRAGVFKIVFS >gi|241320724|gb|ACQV01000010.1| GENE 94 101406 - 101951 524 181 aa, chain + ## HITS:1 COG:NMB0064 KEGG:ns NR:ns ## COG: NMB0064 COG1087 # Protein_GI_number: 15676001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Neisseria meningitidis MC58 # 1 153 141 293 339 294 90.0 5e-80 MQPGDTTSPYGTSKSMVERILTDIQKADPRWSVILLRYFNPIGAHENGLIGEQPNGIPNN LLPYICQVASGKLPQLSVFGDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVSGVHLF NLGSGRAYSVLEIIRAFEVSSGLTIPFQIKPRRDAIWRAFTPTLPTPKRKPVGKPSVIWR R >gi|241320724|gb|ACQV01000010.1| GENE 95 102120 - 103187 1300 355 aa, chain + ## HITS:1 COG:NMB0063 KEGG:ns NR:ns ## COG: NMB0063 COG1088 # Protein_GI_number: 15676000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Neisseria meningitidis MC58 # 1 355 1 355 355 710 94.0 0 MKKILVTGGAGFIGSAVVRHIIQNTQDSVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI CDRAELDRVFAQHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQQMP SEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVV TEGVVGETYNIGGHNEKANIEVVKTICTLLEELVPEKPAGVARYEDLITFVQDRPGHDVR YAIDAAKIGRELGWKPQETFESGIRKTVQWYLDNKTWWQNVLNGSYRLERLGTGK >gi|241320724|gb|ACQV01000010.1| GENE 96 103261 - 104127 1404 288 aa, chain + ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 288 1 288 288 563 93.0 1e-160 MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLAGIRDILVITTPEDNAS FKRLLGNGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNVCLVLGDNIFYGQSFTQTL KQAAAKTHGATVFGYQVKDPERFGVVEFDENFNALSIEEKPQQPKSDWAVTGLYFYDQRV VELAKQIKPSARGELEISDLNQMYLEDGSLSVQLLGRGFAWLDTGTHESLHEAASFVQTV QNIQDLQIACLEEIAWRNGWLSDEKLEELARPMAKNQYGQYLLRLLKK >gi|241320724|gb|ACQV01000010.1| GENE 97 104181 - 104720 823 179 aa, chain + ## HITS:1 COG:NMB0081 KEGG:ns NR:ns ## COG: NMB0081 COG1898 # Protein_GI_number: 15676014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 179 6 184 184 372 98.0 1e-103 MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCDRTFVQENHSKSGKGVLRGL HYQTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILSAENKRQLWVPEGFAHGFY VLSDEAEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQGEPNLSPKDLAGKVLAEAVTF >gi|241320724|gb|ACQV01000010.1| GENE 98 104816 - 105121 82 101 aa, chain + ## HITS:1 COG:NMB0082 KEGG:ns NR:ns ## COG: NMB0082 COG3563 # Protein_GI_number: 15676015 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis MC58 # 1 79 21 99 704 164 94.0 5e-41 MKNAYIPSRGIRKIPHLSTLLPEFHICKDGKGAEAVVGWSLRPTTHKTRAFAAEHQLPFI ALEDGFLRSLGLGVAGYPPTPSSMTTSASTTTPHVLRVWNN >gi|241320724|gb|ACQV01000010.1| GENE 99 105109 - 106254 1040 381 aa, chain + ## HITS:1 COG:NMA0186 KEGG:ns NR:ns ## COG: NMA0186 COG3563 # Protein_GI_number: 15793214 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis Z2491 # 1 380 119 504 704 731 91.0 0 MEQLILAADAMPSETLAQARQAMDFILKHHLSKYNHAPELSDNHPLRSPSKSETVLIIDQ TFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPDVLCGKKQGYLTQLVQQHRVH LLAEDINPISLLQNVDKVYCVTSQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPKIGSL VQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGNLFDVIDYLATVKRKNDKLRGELYCV GMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDNARILAWGNGKEAIVRFAEQHHI PLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAETPSRLEHILQNQNFDDQRPLQKS LFPNSRKLNKGFRLFPSPNTS >gi|241320724|gb|ACQV01000010.1| GENE 100 106318 - 106659 238 113 aa, chain - ## HITS:1 COG:NMA0221 KEGG:ns NR:ns ## COG: NMA0221 COG3039 # Protein_GI_number: 15793244 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 113 223 335 335 210 92.0 6e-55 MLEGIAEGTTVYADKGYDSKENRQHLKEHQLLDGIMRKACRNRPLTEAQTKRNRYLSKTR YVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVCA >gi|241320724|gb|ACQV01000010.1| GENE 101 106644 - 107120 608 158 aa, chain - ## HITS:1 COG:NMA1738 KEGG:ns NR:ns ## COG: NMA1738 COG3039 # Protein_GI_number: 15794631 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 2 144 59 201 283 276 95.0 8e-75 MHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSELLELINRQL TEKNLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDARWTKKNGLY KLGYKQHTRTDEEGYIEKLHITPAIPMSATICHLCWKG >gi|241320724|gb|ACQV01000010.1| GENE 102 107036 - 107323 104 95 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 68 1 68 335 144 98.0 5e-35 MTTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQCTASPIPNSNTASSPASTSTCFAVSTN >gi|241320724|gb|ACQV01000010.1| GENE 103 107409 - 109175 2770 588 aa, chain - ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 1 583 1 569 570 860 70.0 0 MSNPDPRAKLPATPLADNERLKGQSRHLRGTIAQDLGDGLTGGFNGDNFQLIRFHGMYEQ DNRDIRAERNDQKLDNLKNVMLRCRLPGGVITPQQWLGIDQFAGSHTLYGSIRLTNRQTF QYHGILKPDIKAVHQWLHKLGLDSIATAGDVNRNVLCTSNPVESSLHREAWEWAKRISEH LLPKSRAYAEIWLDGEKVETTETAPLAEGVKSGDDTEPVLGASYLPRKFKTTVVIPPHND VDLHANDLNFVAIGENGKLIGFNVLVGGGLSMEHGNTKTYPDTAREFGFIGLDKVLDCAA AVVSVQRDWGNRSDRKAAKTRYTLERVGTEVFIAEVENRMGAKFQPIRPYEFTTRGDRIG WVQGEDKKWHLTIFIENGRITDAPGCPLKTGLREIAKIHKGDFRLTANQNLIVAGVAARD KAKIEKIAREHGLINDKVSKQRENSMACVALPTCPLAMAEAERFLPQFLNHVDEIMAENG LSEEHIVLRANGCPNGCGRTMLSEIGLVGKAVGRYNLYAGGNRQGTRIPRLYKENITEPE ILAILREWIAGWATGREPGEGFGDYAVRTGIVQPVLDPPRDFWKASAA >gi|241320724|gb|ACQV01000010.1| GENE 104 109289 - 111067 2539 592 aa, chain - ## HITS:1 COG:NMA1363 KEGG:ns NR:ns ## COG: NMA1363 COG0369 # Protein_GI_number: 15794284 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Neisseria meningitidis Z2491 # 7 592 19 604 604 641 59.0 0 MNPLPPELAAQIAALNPLQLAWLSGYCWSQAGGQAVQPGIGTPAAAAPAPAAEPLRVAVI SASQTGNARKVAAELQQRLAAAGVNAVHTAAADYKPKNIAGEQLVLLVTSTQGEGEPPEE ALSLYKLLSGKKAPQLSGLKFAVLGLGDSSYPMFCGAGKSFDELLAKLGGERLLERQDCD LEYQAEAAAWLDKIVPLVGSLAAAPAAATGTGNASGSPAPAAPTSAYNKANPFPATLLVR QKITGRDSEKDVRHIEIDLSGSGLQYRAGDALGVWFENDPAVVDEILAAVSLKGDEPVNA GGQGKTVREALLHDWEIGLNTPQFVQGYAEISSNPALKEAAADASAYAAANPIAGIVSQY PAALTAGQLAGLLRPLAPRLYSISSAPEEVGEEVHLTVGVLRYEHNGIPRTGAASGFLGG RLEEEGTVRVFVEENPRFRLPENPDTPVIMIGAGTGVAPFRAFMQQRAANGDSGKNWLIF GNQHFTQDFLYQTEWQSWAKDGLLNKYDFAWSRDQEEKIYVQHKIREEAAELWQWLQQGA HIYVCGDASRMAKDVEQALLDTIAEQGGLSADDADEYLDNLRQEGRYQRDVY >gi|241320724|gb|ACQV01000010.1| GENE 105 111149 - 111364 131 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759038|ref|ZP_04757150.1| ## NR: gi|241759038|ref|ZP_04757150.1| hypothetical protein NEIFL0001_2199 [Neisseria flavescens SK114] # 6 71 1 66 66 87 100.0 2e-16 MGEGGMLQSLHKPQRLPENPTANVQVARRSGINAEQNKQRPSETAAFSRERRLPENLMAK FQVARSKSRSG >gi|241320724|gb|ACQV01000010.1| GENE 106 111381 - 112709 2067 442 aa, chain - ## HITS:1 COG:NMB1153 KEGG:ns NR:ns ## COG: NMB1153 COG2895 # Protein_GI_number: 15677029 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Neisseria meningitidis MC58 # 1 426 1 428 428 569 68.0 1e-162 MTSPHRQAPLRFITAGSVDDGKSTLIGRLLYDSKALLGDQVRRLESSRSQGAIDFSALTD GLEAEREQGITIDVAYRYFATARRKFIIADTPGHEQYTRNMVTGASTAHAAVLLIDAAQL DFSQQPLQLLPQTKRHSAILRHLRCPHIIVAVNKMDLLGFSQEKFNAVAAAYRELADTLG LPETRFIPISALNGDNIVHESAHTPWYQGGSLLQVLESLPAGEGVPEAPQDFHFPVQLVQ RADGSKQDDFRGYQGRIEAGSVRVGDKVRVEPAGLESSVRGIIGLKGSVDQATAGEPATL LLADDIDISRGDTILSSASPLAPQRRLAATLCWFDSRPLNPARRYLLKHTTRTVPAKIAA VRRVWDVHTLSHSAGRNTLEMNDLGEVELTLAQPVVCTPYAANPATGAFILIDEATNHTA AAGMILADAEAAGGTQQAEQAT >gi|241320724|gb|ACQV01000010.1| GENE 107 113009 - 113929 1384 306 aa, chain - ## HITS:1 COG:RSc2422 KEGG:ns NR:ns ## COG: RSc2422 COG0175 # Protein_GI_number: 17547141 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Ralstonia solanacearum # 5 306 15 316 316 494 80.0 1e-140 MSATLQNDHLDWLEAESVHIIREVLAECRNPAILFSGGKDSVVLLALARKAFAVPGRSIP LPFPLVHIDTGHNYPEVIAFRDQTARESGARLIVGSVEDSIAKGTVVLRRETDSRNAAQA VTLLETIEEHGFGALMGGARRDEEKARAKERIFSFRDEFGQWNPKDQRPELWSLYNARLH PGENLRVFPISNWTELDIWQYIEREKLTLPPIYYAHRRQVVRRNGLLVPVTELTPPREGE QTEELSVRFRTVGDISCTCPVASSAATPAEIIAETALADISERSATRMDDQVSEAAMEQR KKQGYF >gi|241320724|gb|ACQV01000010.1| GENE 108 114078 - 114857 1188 259 aa, chain - ## HITS:1 COG:NMB1155 KEGG:ns NR:ns ## COG: NMB1155 COG0175 # Protein_GI_number: 15677031 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Neisseria meningitidis MC58 # 19 259 6 246 246 304 60.0 9e-83 MNIQEIPVVREETASAVSFRPKLWQIPRPISAVYQRLPEKTAALRHRLLEIYRRHSRVKL ASSLAVEDMLITDLLAQQGLRVEVFMLQTGRLNAETLDLADEVRRRYPALDFRLYYPEEK AVEEYVQTHGLNAFYDSVELRKRCCHIRKVEPLNRALADADAWLTGQRRGQSVTRSELAL AEYDNARGIAKYNPIFDWSEQEVWAYTLQQRLPFNELYRQGYPSIGCEPCTMPVKEGEDI RSGRWWWESRDSKECGLHK >gi|241320724|gb|ACQV01000010.1| GENE 109 114869 - 116314 1491 481 aa, chain - ## HITS:1 COG:NMA1367_2 KEGG:ns NR:ns ## COG: NMA1367_2 COG0007 # Protein_GI_number: 15794288 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Neisseria meningitidis Z2491 # 211 462 3 254 277 307 66.0 3e-83 MDYFPLFVDLKGRPVLVVGAGHVALRKIRLLLRCGAVVRIAADRLHPKVAALHGAGRVEW AARAFSPELLDTAFLAVAATDDSDLNERVFQAAQSRRQLVNTVDDPARCNFIFPSIIDRN PIQIAISSGGKAPVLARLLRERLEALLPQGLGVMAQIAGQWRGRVKARLGSTTQRRRFWE RLFASAAFRRLAESRRSREAGQLVWRHLAGEQPQSGEVALVGAGPGDAGLLTLKGLQRIQ EADVVLYDALVSDAVLDLVRRDADKICVGKRAGGGSVPQEETNLLLVRHARAGKRVVRLK GGDPFVFGRGGEELEALREAGIPFEVVPGITAALGAAAYAGIPLTHRDHAHGAMFITGHR KIDAEAPDWPALAQNRQTLVVYMGTIKAAELSRELIAHGRAASTPAAVISCGTLPHQQVF SGSLAELPELAAQAAQPAQLVIGETVALRQDLAWFGAQPGRQDEQGGRYVQQPAAAAGQA A >gi|241320724|gb|ACQV01000010.1| GENE 110 116898 - 117287 258 129 aa, chain - ## HITS:1 COG:NMA0221 KEGG:ns NR:ns ## COG: NMA0221 COG3039 # Protein_GI_number: 15793244 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 129 207 335 335 231 89.0 3e-61 MHITPANTHECNHLSPLLEGIAEDTTVYADKGYDSAENRQHLEEHQLLDGIMRKAHRSRP LTENQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLLKVSAQSHLKAMCLNLLKAA NRLSMPVCA >gi|241320724|gb|ACQV01000010.1| GENE 111 117360 - 117806 485 148 aa, chain - ## HITS:1 COG:NMA1738 KEGG:ns NR:ns ## COG: NMA1738 COG3039 # Protein_GI_number: 15794631 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 2 135 59 192 283 254 94.0 3e-68 MHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSELLELINRQL TEKNLKVEKASAAVIDATIIQTAGSKQRQAIEVDDEGQVSGQTTPSKDKDARWTKKNGLY KLGYKQHTRTDEEGYSGLNLNQDKATKP >gi|241320724|gb|ACQV01000010.1| GENE 112 117722 - 118009 155 95 aa, chain - ## HITS:1 COG:NMA1115 KEGG:ns NR:ns ## COG: NMA1115 COG3039 # Protein_GI_number: 15794062 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 68 1 68 335 142 97.0 2e-34 MSIFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAILLGQCTASPIPNSNTASSPASTSTCFAVSTS >gi|241320724|gb|ACQV01000010.1| GENE 113 118076 - 118297 248 73 aa, chain + ## HITS:1 COG:NMA0185 KEGG:ns NR:ns ## COG: NMA0185 COG3562 # Protein_GI_number: 15793213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis Z2491 # 1 73 347 419 419 143 94.0 6e-35 MPVKVLGRAHYDIPGMTDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNFYSQVFF PNKKTSDSSAPTT >gi|241320724|gb|ACQV01000010.1| GENE 114 118665 - 120071 1795 468 aa, chain + ## HITS:1 COG:NMA0184 KEGG:ns NR:ns ## COG: NMA0184 COG0790 # Protein_GI_number: 15793212 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 652 95.0 0 MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYTEAAFVLGDHLLQNGHPEQALPWL EAAAAQRHPKALFILLQQREHNGTPTGQLLNDYAWLGEQGHLEAQLILMRYHAQRNDPQS LYWAELAAARYAAPAYYHLARHHQRQGDIETAIEQYEKAAALGVTAACWQLGQIYFYGTG VSPNHGQAEHYLEQAAQAGHIAAQTLLADLLAAQRKPEALKWYRRAADKEQAEAQAKLAQ YALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGLGIKADNHIAHDYYHCAAA LGSAAAAQKLISDAALYHPQQYEQIKTTALQQQQTETTYRLAEAQANAIGRPADYNAARK NYMEAAEFHHKNAAAALGRIYHYGLDTAQDPRAAAHWYAIAAEQNHPSAQYHLACFYYHG QGVGCHVPTACYWLQAAISNGHTSAESLTSLLEQWRREAHHAIGQKTV >gi|241320724|gb|ACQV01000010.1| GENE 115 120289 - 121503 2100 404 aa, chain + ## HITS:1 COG:NMA0183 KEGG:ns NR:ns ## COG: NMA0183 COG0786 # Protein_GI_number: 15793211 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Neisseria meningitidis Z2491 # 1 404 1 404 404 656 88.0 0 MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGLVAAIVLFALHEAYGVS FKFEKPLQDAFMLIFFTSIGLSADFSRLKAGGLPLVIFTAVVGAFIIVQNFVGVGLASAL GLDPLIGLITGSITLTGGHGTAGAWGPDFESKFGLTGATGLGMASATFGLVFGGLIGGPV ARRLINKMGRKPVVKTAKSDDNDVADDIFEKAQRTRLITADSAVETLAMFAACLAFAEIV DGYDKAFFDLPKFVWCLFAGVVIRNVLTATFKVNMFDRAIDVFGNASLSLFLAMALLNLK LWELTGLAGPVTIILAVQTVVMILYATFVTYVFMGRDYDAAVLAAGHCGFGLGATPTAVA NMQSITQTFGPSHKAFLIVPMVGAFFVDLLNAAILSGFVSVIKG >gi|241320724|gb|ACQV01000010.1| GENE 116 121609 - 122631 1479 340 aa, chain + ## HITS:1 COG:no KEGG:NMO_1941 NR:ns ## KEGG: NMO_1941 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 19 340 17 338 338 306 51.0 7e-82 MYKKTASVLILSTILLAACSKEEPKAALDCAQPATLQNIRTTIEDTLKQQARSFARNDNR QFVDADKIIAAGLELETLLEDPKETEDNGKAICRANLKIRIPDTILKTAIDNSPLIYGNT PLSDMLEQKLMGSNLTFENNTFSTTLLYTPDKDGKLILEDNTLSTTAQTLSATLLPYGVK SIVMIDGKPVSKEQAIKLLQNQNTEEPPTVDPQDILENNAASQAVGLTDDDDNSDYEVLR PDRETPRNEPPGLSQSELDNARAQNRQADGEINDLWGGMDSDVKQQILGEQRAWIQSKKL NCQQAAASADNAAQAEYLRLQCETRMTRERTQYLRGYSIN >gi|241320724|gb|ACQV01000010.1| GENE 117 122686 - 123681 1471 331 aa, chain + ## HITS:1 COG:NMB2127 KEGG:ns NR:ns ## COG: NMB2127 COG0616 # Protein_GI_number: 15677940 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Neisseria meningitidis MC58 # 1 330 1 327 328 457 66.0 1e-128 MQYRIHREGDAPNTPSSASTPVDNWERNTLREVLLAAYQEQRRARIWRNIWRGIAVLIFL SLIFGLAEEEGKTTSIHARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNAKAII IRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYADPSS IVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLGDIHQ EFIKAVKLGRGTRLKDKQYPDVFSGRIYTGKEAKQVGLIDDFGSIYSVARDVVKAPELVN YTPQDDFSKMLSRRFGAEVKAKVKETLSEIW >gi|241320724|gb|ACQV01000010.1| GENE 118 123866 - 124870 461 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 5 325 8 326 346 182 34 1e-44 MIAPILAITSGEPAGIGPDICLDLAFADLPCRPVVLCDKNLLVQRAGQLGKSVILRDFQA QAADPLPKGELEVLHIPLDAECRAGELNPANAAYVLRLLDTVYQGISDGLFAGMVTAPLH KGIINDAHAGNGFFSGHTEYLAEKSHTEQVVMMLTGGGLRVALVTTHLPLKDISAAITKP LIESVVRILEHDLRHKFGIAKPVILVTGLNPHAGEGGHLGHEEIDTIIPALHALQAEGID ARGPYPADTVFQPFLLKDADAVLAMYHDQGLPVLKYAGFGEGVNITLGLPFIRTSVDHGT ALNLAGTGKADSGSLITAVQAALDMAHNMQKQAV >gi|241320724|gb|ACQV01000010.1| GENE 119 125021 - 125557 821 178 aa, chain - ## HITS:1 COG:NMA0343 KEGG:ns NR:ns ## COG: NMA0343 COG3038 # Protein_GI_number: 15793353 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Neisseria meningitidis Z2491 # 45 174 3 132 134 174 77.0 9e-44 MTTTRPQTYDAVARALHWLTVLGFIGILSTITVWTIYDGEEWVKSLFGVHKSIGFITLLV IAVRIVWALLNASKRPAADSFAAKAGHLALYGLMLAVPVIGMIRQYGGGRGPLKVFGIEV MQGSPEKIEWMSNLGNMAHGKLGWLLFALVAGHIAMVVVHRIQGHDVLYRMIGRRSQV >gi|241320724|gb|ACQV01000010.1| GENE 120 125791 - 127320 1171 509 aa, chain + ## HITS:1 COG:NMB2026 KEGG:ns NR:ns ## COG: NMB2026 COG1178 # Protein_GI_number: 15677851 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Neisseria meningitidis MC58 # 4 507 24 526 531 523 71.0 1e-148 MQVWIRRCALLLLPLGFLAVMVAAPLLSLAFYDGEGAWAEVVADDYMRLRLGWTVAQAVL TCVLVTALGVPAAWVLARMDFAGRSTVLRLLMLPFVMPTLVAGMGVLALFGAHGMLAAGW QDTPWLLIYGNVFFNLPVLVRSAYQGFVRVPQARLLSAQSLGADTWRRFVWVEWPVVRAW VAGGACLVFLYCFSGFGLALLLGGERFATVEVEIYRLVAYELDMARASVLVWLVLAVTAA AGGLYAYWSRRVAVDKSVSPLPPRAPIWAWEKWLTATVLAMLAVCCLLPLVAVWLKAVSA GSSWAVLLEAQTWAAVWNTVRFSAAAVAAATVLGVLYAAAARQMAWLRALMFLPFMVSPV CIAFGVLLLYPQWTASLWLLTATYALLAYPFVAKDVLAAWDGLPKDYAAAARTMGANGFQ TACYVTAPLLKPALRRGLTLASATCIGEFAATLFLSRPEWQTLTTLIYDYLGRAGADNYG RAMVLTAVLTALALTAFLLVDEAEGQKAV >gi|241320724|gb|ACQV01000010.1| GENE 121 127435 - 127998 838 187 aa, chain + ## HITS:1 COG:NMB2047 KEGG:ns NR:ns ## COG: NMB2047 COG0634 # Protein_GI_number: 15677869 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Neisseria meningitidis MC58 # 1 187 1 187 187 354 91.0 4e-98 MTDLETKRLETQAMLDNADLLFDQEQCRTALQKVADDITRDLGDKYPLLLPVMGGAVVFT GQLLPLLRFPLDFDYVHVSRYGDKLAGGAFNWKRMPDPEQIKGRHVVVLDDILDEGHTMA AIQEKLLEMGAASCRAAVFANKLIDKEKPTKADYVGLDVPNRYVFGYGMDAAGCWRNLGE IYALNNK >gi|241320724|gb|ACQV01000010.1| GENE 122 128057 - 128485 792 142 aa, chain + ## HITS:1 COG:NMA0390 KEGG:ns NR:ns ## COG: NMA0390 COG2893 # Protein_GI_number: 15793398 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Neisseria meningitidis Z2491 # 1 142 1 142 145 243 83.0 8e-65 MIGLLIITHETIGEAYRGLADHFFPNGFPENLHILGVQPNEDQNDIINNAIAALQEFPDN RGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMIKAIQYSSQAENLSDFTETVKE AAIRGIFAITSAPEDLVCKENG >gi|241320724|gb|ACQV01000010.1| GENE 123 128530 - 128799 596 89 aa, chain + ## HITS:1 COG:NMA0391 KEGG:ns NR:ns ## COG: NMA0391 COG1925 # Protein_GI_number: 15793399 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Neisseria meningitidis Z2491 # 1 89 1 89 89 139 89.0 2e-33 MLKQEIEIINKLGLHARASSKFTQTASQFQSEVWVTKNGNRVNGKSIMGLMMLAAAKGTV IELETEGADEAAAMQALTDLINDYFGEGE >gi|241320724|gb|ACQV01000010.1| GENE 124 128799 - 130562 2708 587 aa, chain + ## HITS:1 COG:NMA0392 KEGG:ns NR:ns ## COG: NMA0392 COG1080 # Protein_GI_number: 15793400 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Neisseria meningitidis Z2491 # 1 586 1 585 591 992 85.0 0 MSIVLHGVAAGKGIAIGHAHLITRGTTEVPQYDVDPDKLDAEVARFDNAIKATRKELEQL RGAIPENAPTELGAFISLHLMLLTDVTLSREPIDILREQKINAEWALKQQSDKLAAQFDS IDDDYLRERKQDMLQVVRRIHNNLVGQSNEINLAGNLFDDTVLIAHDLSPADTVLFKEQH ITAFVTDAGGPTSHTAILGRSLDIPSVIGLHNARKLITENEIVIVDGINGTLIIDPDEVV LNEYRRLAREYRSHKRELNKIKKTAATTADGINIELLANIESAEDIKTLHNFGADGVGLF RSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSITVRTVDLGVDKNPRWFGQNSTPNGSL NPALGLTGIRLCLAEPVMFRTQMRAILRAAAHGPVRMMWPMITSISEVRQCLIHLDTAQR QLTERGETFGPVSIGCMIEIPSAAMTVGSILKLVDFISVGTNDLIQYLLSVDRGDDSVSH LYQPGHPAVLKTLQHIIRTANRMEKGVSICGEMAGDTVFTRLLLGMGLRRFSMNPNNLLS VKNIILHSHTGHLENDAAKILRCEDPEKTEKLIKILNQSEQAESQAV >gi|241320724|gb|ACQV01000010.1| GENE 125 131079 - 132194 1725 371 aa, chain + ## HITS:1 COG:YPO1343 KEGG:ns NR:ns ## COG: YPO1343 COG0614 # Protein_GI_number: 16121623 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 19 371 31 378 378 256 39.0 4e-68 MKFTQLSALIAAAALSVGSVSAFAKPVQLTDTIGRKVTVDLPAKRVVLGFYYQDYMAIGG KTALDNVVGFSKAVWADWAPPSWAAFSKAVPKLNQLADVGEVEVGTFSVEKVLALKPDLL ILADWQYKALGSDLDRINKAGIPIVVLDYNAQTVAKHVQSTKLIGTLTGQQQKADKLAAD YKRIADTIQARVKKANLPKPKVYIEFGNKGPAEHSVTFGKSMWGSMATLVGSNNISASSV EFYGPINPEKVLAAKPDVIVITGRETELKKSPTAMVMGWGIPKAEAEKRLAGFAKRAGWA NLPAIKNNRLYAAYHANSRTLSDSASIQFMAKAIYPQLFKDFNPEKTYTDFYRQNLPVVP NGTFYLYPKGQ >gi|241320724|gb|ACQV01000010.1| GENE 126 132283 - 133329 1217 348 aa, chain + ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 8 348 12 351 355 270 46.0 2e-72 MNDSVVAEIVKNQRKLEGKRWLIVLMFLIIAAVSFLFDIATGPAMTDTLPVGEVVNVLLG KPGVDEMNRLIVMDLRLPIAVMALVVGAALGVGGAEIQTLLNNPMASPYTLGLAAAAGLG ASMVIAFGGFGLPETVAVPIGAFVMTMLASGILFLFASARRFNSAMLVLVGIALLFLFQS ILSLIQFIAAPEISQQILFWLFGSLNKATWETVIVTAAVTAVCVFLLSRDVWKLTALRLG EERAVGLGINLQLLRLKTLVLVAVMTATAISFVGVIGFIGLVAPHVARILLGEDQRFFLP GAMLAGAAFLSVASVLSKVIIPGALFPVGIVTSFVGVPFFFWIVLTKR >gi|241320724|gb|ACQV01000010.1| GENE 127 133340 - 134107 301 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 233 1 237 245 120 33 3e-26 MLKLENVHIRRGDYVVADSIDLTLEQGKVYSVLGPNGTGKSSLMKTIFGEVAHKGTIRYG DEVLSKIHLQSWRKRIGYMPQDTAAEASLTALEVVLLGRMDALHMHVGDELLHEAASIMA ELGIGHLAHRDVMRLSGGQRQLVMFAQVMLRRPEVLMLDEPVSALDMHHQLNLLERVVQY THEHNLVTLMVLHDLSLAAQFSDGVILLGEGKVQAQGAPQDVLQADMIGRLYKVDIELLY DSKGLPVIRPMRQSA >gi|241320724|gb|ACQV01000010.1| GENE 128 134278 - 134709 800 143 aa, chain + ## HITS:1 COG:BMEII0965 KEGG:ns NR:ns ## COG: BMEII0965 COG3794 # Protein_GI_number: 17989310 # Func_class: C Energy production and conversion # Function: Plastocyanin # Organism: Brucella melitensis # 20 143 25 146 146 84 39.0 8e-17 MKESLFLLMLTASLGAYAANHEVKMLDNGKDGSMVFEPGYVNAKVGDTVTFKATNSGHWV QSKALPDGVADFLSEDGKDFTLKLDKEGVYVYTCPPHRMMNMSGVIQVGKPVNKAKAQAV VDEMENRAMQSKGRLKKYMAQVK >gi|241320724|gb|ACQV01000010.1| GENE 129 134848 - 136113 1574 421 aa, chain + ## HITS:1 COG:NMB0014 KEGG:ns NR:ns ## COG: NMB0014 COG1519 # Protein_GI_number: 15675962 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Neisseria meningitidis MC58 # 1 417 1 417 423 567 64.0 1e-161 MIRRLYATLWHLAPFLIRRHLRRRALKSPAYLEHWGERFGQAYPNPVQRPIWIHAVSVGE TRAAEPLVQALRRHFPDSPFLITQMTPTGRATAQSLFPDAQCRYLPYDKSEWVARFLAEH RPICGILMETEIWPNLMHGCKEAGIPLFLANARLSEKSQRGYLKIRKLVEPAMQTLSGCF AQTAADAERLHLIGASNVHVCGNTKYDIAPPDDSRPLAVAFKERIGARPVVVCASTRVYK GTDEAELLLKAWQGYRGNALLVIVPRHPENFQTAYDTAKSLGYTVQKRSDGQPVSPDTQV WIGDSMGELAAYYLSADIAFVGGSLVDAGCQNIIEPISCRVPTLFGYSNYNFAQACKGAV EAKAAVRVETAEAWYRTTRQYLDDETLRQQLISHTKQFISQHQGASAKIAKAIADCLNCR N >gi|241320724|gb|ACQV01000010.1| GENE 130 136152 - 136958 511 268 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 98 31.0 1e-20 MNMHKNTRLTLHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLSKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKVTDKR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTGHLIDPCPYLIECVYSDNGTKYKGSANH AFGVACYENGIGQKFARVARPQTNGKAERVIRTLMEMWHGKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|241320724|gb|ACQV01000010.1| GENE 131 137064 - 137156 108 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHTTRTGRSWLRLRTVVKIILTLFLLLVN >gi|241320724|gb|ACQV01000010.1| GENE 132 137424 - 137643 295 73 aa, chain + ## HITS:1 COG:NMA1115 KEGG:ns NR:ns ## COG: NMA1115 COG3039 # Protein_GI_number: 15794062 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 73 12 84 335 149 98.0 2e-36 MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSMFKAVLLRQWHS LSDPELEHSLITR Prediction of potential genes in microbial genomes Time: Thu May 26 11:28:18 2011 Seq name: gi|241320655|gb|ACQV01000011.1| Neisseria flavescens SK114 ctg1118407793864, whole genome shotgun sequence Length of sequence - 44115 bp Number of predicted genes - 45, with homology - 45 Number of transcription units - 24, operones - 11 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.625 + CDS 5 - 433 94 ## COG1643 HrpA-like helicases 2 1 Op 2 . + CDS 460 - 2043 1834 ## COG1643 HrpA-like helicases + Term 2247 - 2295 1.1 3 2 Tu 1 . - CDS 2085 - 3071 92 ## BamMC406_3172 RNA-directed DNA polymerase (reverse transcriptase) - Prom 3228 - 3287 8.7 - Term 3291 - 3340 -1.0 4 3 Tu 1 . - CDS 3491 - 4114 -27 ## ECIAI39_4901 hypothetical protein; putative membrane protein - Prom 4172 - 4231 2.8 5 4 Tu 1 . + CDS 4699 - 6204 1071 ## Cpin_0250 zinc finger SWIM domain protein + Term 6338 - 6374 4.1 - Term 6385 - 6432 13.3 6 5 Op 1 15/0.000 - CDS 6454 - 7224 1368 ## COG1192 ATPases involved in chromosome partitioning 7 5 Op 2 . - CDS 7292 - 7921 1100 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 8 5 Op 3 . - CDS 8004 - 8498 672 ## NGO1792 hypothetical protein - Prom 8521 - 8580 3.5 + Prom 8827 - 8886 5.8 9 6 Tu 1 . + CDS 8930 - 10402 2026 ## COG0579 Predicted dehydrogenase + Term 10420 - 10452 5.0 + Prom 10407 - 10466 5.5 10 7 Op 1 . + CDS 10546 - 11328 1172 ## COG0134 Indole-3-glycerol phosphate synthase 11 7 Op 2 . + CDS 11392 - 11763 557 ## COG3189 Uncharacterized conserved protein + Term 11793 - 11836 10.8 - Term 11779 - 11822 10.0 12 8 Tu 1 . - CDS 11836 - 12363 822 ## COG2323 Predicted membrane protein - Prom 12410 - 12469 7.2 - Term 12438 - 12488 15.0 13 9 Tu 1 . - CDS 12522 - 13865 2360 ## COG0137 Argininosuccinate synthase - Prom 13894 - 13953 4.4 + Prom 13795 - 13854 6.1 14 10 Op 1 . + CDS 13976 - 14776 961 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 15 10 Op 2 . + CDS 14776 - 15402 573 ## COG0671 Membrane-associated phospholipid phosphatase 16 10 Op 3 . + CDS 15415 - 16365 851 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold + Term 16416 - 16457 10.0 - Term 16397 - 16450 13.1 17 11 Tu 1 . - CDS 16460 - 16753 638 ## Nmul_A1942 XRE family transcriptional regulator - Prom 16980 - 17039 6.4 - Term 17093 - 17144 9.2 18 12 Op 1 . - CDS 17158 - 17937 1437 ## COG0024 Methionine aminopeptidase 19 12 Op 2 . - CDS 18001 - 18606 728 ## gi|241759054|ref|ZP_04757165.1| conserved hypothetical protein 20 12 Op 3 11/0.000 - CDS 18674 - 19285 1207 ## COG2823 Predicted periplasmic or secreted lipoprotein 21 12 Op 4 11/0.000 - CDS 19359 - 19952 1030 ## COG0279 Phosphoheptose isomerase 22 12 Op 5 . - CDS 19957 - 20304 300 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase - Prom 20413 - 20472 6.9 + Prom 20275 - 20334 4.9 23 13 Tu 1 . + CDS 20370 - 21248 919 ## COG0313 Predicted methyltransferases + Term 21276 - 21318 8.1 - Term 21263 - 21305 8.1 24 14 Tu 1 . - CDS 21406 - 22215 1292 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Term 22248 - 22290 8.1 25 15 Op 1 16/0.000 - CDS 22330 - 23319 1602 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 26 15 Op 2 . - CDS 23316 - 25688 3332 ## COG1452 Organic solvent tolerance protein OstA - Prom 25750 - 25809 3.9 + Prom 25700 - 25759 6.4 27 16 Op 1 . + CDS 25785 - 26789 1400 ## COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases 28 16 Op 2 . + CDS 26872 - 28767 2817 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 28781 - 28825 14.1 - Term 28772 - 28809 9.1 29 17 Op 1 3/0.375 - CDS 28925 - 29512 313 ## PROTEIN SUPPORTED gi|229245482|ref|ZP_04369543.1| acetyltransferase, ribosomal protein N-acetylase 30 17 Op 2 . - CDS 29607 - 30197 756 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Prom 30229 - 30288 5.8 + Prom 30177 - 30236 5.3 31 18 Tu 1 . + CDS 30276 - 30518 299 ## NMB2100 hypothetical protein + Prom 30538 - 30597 6.6 32 19 Op 1 38/0.000 + CDS 30696 - 31424 1227 ## PROTEIN SUPPORTED gi|225373956|ref|ZP_03751177.1| hypothetical protein NEISUBOT_02251 + Term 31439 - 31469 1.8 + Prom 31518 - 31577 2.4 33 19 Op 2 24/0.000 + CDS 31613 - 32401 606 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 32421 - 32461 3.5 + Prom 32432 - 32491 4.1 34 19 Op 3 . + CDS 32621 - 33340 1212 ## COG0528 Uridylate kinase + Term 33345 - 33413 19.6 + Prom 33353 - 33412 2.0 35 20 Tu 1 . + CDS 33504 - 33974 650 ## COG1576 Uncharacterized conserved protein + Term 33992 - 34030 3.0 + Prom 34028 - 34087 7.4 36 21 Op 1 . + CDS 34120 - 34761 851 ## COG0461 Orotate phosphoribosyltransferase + Prom 34773 - 34832 4.4 37 21 Op 2 . + CDS 34859 - 35254 519 ## NMA0581 hypothetical protein 38 21 Op 3 . + CDS 35251 - 36564 1318 ## COG0548 Acetylglutamate kinase 39 21 Op 4 . + CDS 36609 - 37388 1100 ## COG0708 Exonuclease III 40 21 Op 5 . + CDS 37375 - 37719 433 ## NMO_0086 hypothetical protein 41 21 Op 6 . + CDS 37730 - 38263 703 ## NGK_2244 hypothetical protein + Term 38289 - 38335 9.0 + Prom 38341 - 38400 7.2 42 22 Op 1 . + CDS 38423 - 40534 2977 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Prom 40561 - 40620 5.8 43 22 Op 2 . + CDS 40705 - 41400 960 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 41422 - 41465 10.0 - Term 41506 - 41556 11.1 44 23 Tu 1 . - CDS 41567 - 42937 1801 ## COG0541 Signal recognition particle GTPase - Prom 42998 - 43057 8.3 + Prom 42940 - 42999 6.9 45 24 Tu 1 . + CDS 43120 - 43932 668 ## COG4137 ABC-type uncharacterized transport system, permease component + Term 43951 - 43992 10.0 Predicted protein(s) >gi|241320655|gb|ACQV01000011.1| GENE 1 5 - 433 94 142 aa, chain + ## HITS:1 COG:NMA0430 KEGG:ns NR:ns ## COG: NMA0430 COG1643 # Protein_GI_number: 15793435 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis Z2491 # 4 141 338 468 1041 168 68.0 3e-42 MSNGRIAPEEAREIFIRSALVAQECDLKAEFFVHNKKLIKEITELEHKSRKQDVLVDDEA LFAFYNERLPDFYTANAVSDGLHPTNPQQTTPSPVGEGRGEAKQLPHKPTFPQPQQALSL TLSRRRGNRVPQPQRFQAACTT >gi|241320655|gb|ACQV01000011.1| GENE 2 460 - 2043 1834 527 aa, chain + ## HITS:1 COG:NMB2011 KEGG:ns NR:ns ## COG: NMB2011 COG1643 # Protein_GI_number: 15678022 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 12 526 625 1139 1139 911 93.0 0 MREPSSHPLQNVSDDPKPKKQPAPPKGRLKPLPLADIRTFQAWLKTAERDNPRLLFLSRD DLMQHAAAHITEEQFPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEW LVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGD IRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAMGRNLIQIQQQLGKAAATTFRDNT QEFERDNVTAWDIGTLPESIKFARGKQQLTGYLSLQKEKDGRIALRLFDTSAAAEQAHRL GVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPR NEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYTELNGKLGKHPLTHLLRQRLQTLLAA GFATRTPWAQWPRLPIYLKAMTLRLEKYSGNPARDAAREADIQELEQMWQEKTDSLVKQG LPVSDDLTAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIKQL >gi|241320655|gb|ACQV01000011.1| GENE 3 2085 - 3071 92 328 aa, chain - ## HITS:1 COG:no KEGG:BamMC406_3172 NR:ns ## KEGG: BamMC406_3172 # Name: not_defined # Def: RNA-directed DNA polymerase (reverse transcriptase) # Organism: B.ambifaria_MC40-6 # Pathway: not_defined # 3 328 153 466 466 176 34.0 1e-42 MNEIKNQIPDFKIRSLISKALKTPTVGIDKKATSKNIIGIPQGLSISNILAEIYIHRFDT WVKNNFPDSSYFRYVDDMLILFDSKKIQRKTLQASLVEKLSNEFSLTVHDIVELTDMNNE NSKSSCGSLIEHKFCFLGYEFSNYKISVRLSSIQNMEKKIAKFCTQLRYDLEYIERNYSG QKSELDWQKEHKLKKCEYLINLAITGCIYNNKRYGWIFYFSKISDLSILRYLDLSICKIL NRFGLNRKIKVKRFLKAFYTVKGSKLPKKYIVNFDKIALDIEEQKKFLMIFYDYRYLQKK TDDEIEAMFLYRVNKYSSELEEDLGMIS >gi|241320655|gb|ACQV01000011.1| GENE 4 3491 - 4114 -27 207 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_4901 NR:ns ## KEGG: ECIAI39_4901 # Name: not_defined # Def: hypothetical protein; putative membrane protein # Organism: E.coli_IAI39 # Pathway: not_defined # 14 192 52 220 234 99 35.0 1e-19 MTNPPVEPESLQQLENKVWFTYSARIQTHKRLLFNNFWSNFILVLYSLATLIASIVSLKD TTFYGSYTSELIVVISAITLVASLIIVNVNYQTRILRMRDNYILLQKLYEDIKIYRNSQK ESSEDPEKYSDFVRSYMSILEKNENHITLDDIANRCQAKGLKNREPDCREVMLWYSYKFC RFLLILIFLLLPTYLIIRPLLKFIWLC >gi|241320655|gb|ACQV01000011.1| GENE 5 4699 - 6204 1071 501 aa, chain + ## HITS:1 COG:no KEGG:Cpin_0250 NR:ns ## KEGG: Cpin_0250 # Name: not_defined # Def: zinc finger SWIM domain protein # Organism: C.pinensis # Pathway: not_defined # 14 498 15 576 580 138 24.0 5e-31 MPRIHPLHLFPPHIVERGLLYFQQGKVRDVQKTSSGRYRAEVCGSENYSVWLKLDSDLYI KDGGCDCPYGWACKHMAALWYAVRAETPDGQPDESDVQQPKQGGNPYRQQLSRIFSRTRY YDYYEAADLGFRLQNWLEDVAQEGTAALQQALPLLIPRLQDAFEKADDSDGMLGDAMYMA IDLLEEAVMENVPKRLINFLDKCLDDSRYFDFSEAGNKIYQIRARIWRLRGEWQAWQDYV VKRLAVTKSGWEHEFWAFEGWQVLQAKGDTAAAQDYFRRHLHLPKFRQIAVEQAVGQRDW AEAEHLLREGIKIAKAEGTPGTAHKWKLQLFDVLKETGKNVREIAADLAFSTSLSLPHYE AWKATFSAAEWPHEFNRLLARLSGQYSLQAEILEHEQEFDLLLALLQQHLSLYMMERFAP SFPEPYHDQIVACYLKIFAAEINKASNRKQYRQLLNQLKTIRRQYSAQRQAMEDFADEIR ERYSEKPRRPALLEELDRAGF >gi|241320655|gb|ACQV01000011.1| GENE 6 6454 - 7224 1368 256 aa, chain - ## HITS:1 COG:NMA0076 KEGG:ns NR:ns ## COG: NMA0076 COG1192 # Protein_GI_number: 15793105 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis Z2491 # 1 254 1 254 257 409 82.0 1e-114 MSAQILAVANQKGGVGKTTTTVNLAASLASKGRRVLVVDLDPQGNATTGSGINKATIENG VYQVVLGETDIPNAVVRSKEGGYDVLGANRTLAGAEVELVQEIAREIRLKNALQLVADNY DYVLIDCPPSLTLLTLNGLVAANGVIVPMLCEYYALEGISDLVATVRKIRQAINPDLDVT GIVRTMYDSRSRLVVEVSEQLKQHFGNLLFDTVIPRNIRLAEAPSHGLPALAYDAHAKGT QAYLDLADELIARLEK >gi|241320655|gb|ACQV01000011.1| GENE 7 7292 - 7921 1100 209 aa, chain - ## HITS:1 COG:NMB0190 KEGG:ns NR:ns ## COG: NMB0190 COG0357 # Protein_GI_number: 15676117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Neisseria meningitidis MC58 # 1 207 1 207 207 312 74.0 3e-85 MNQAQQLRDGIQALGLDIDDAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSL TLLPYIKHAQTMLDVGSGGGQPGIPTAICRPDLDITLLDANTKKTAFLQQAVIELGLKNV RVISGRVEAAADCRADVITSRAFAELADFVNWTEHLLKDGGYWAAMKGVYPQEEIDKLPE SVAVEKVEALHVPQLNAERHIVIIRKKAV >gi|241320655|gb|ACQV01000011.1| GENE 8 8004 - 8498 672 164 aa, chain - ## HITS:1 COG:no KEGG:NGO1792 NR:ns ## KEGG: NGO1792 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 163 33 191 191 169 55.0 5e-41 MYLTQEKPYRPLLVALMFLTLPLAMILHNIVQIAFSNGQGLLVMVKDGAWVWQSGWQDSV AWFVCGMFAFLNLPIAGGLTKLAYKKMMRRHSRYAIFLAGVAACASAAAGLIFEAILGNA ALAGMRGQGVFYYTLSVWIIAMLTLPKQLTRAPEQPIVFHKMKR >gi|241320655|gb|ACQV01000011.1| GENE 9 8930 - 10402 2026 490 aa, chain + ## HITS:1 COG:NMA0333 KEGG:ns NR:ns ## COG: NMA0333 COG0579 # Protein_GI_number: 15793344 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 488 1 488 488 893 87.0 0 MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALESSNAWNNAGTGHSALC ELNYAPLTADGTIDPTRALNIAEQFHISRQFWATLVEEGKLTDRTFINSVPHMSLVMNAD HCSYLQKRFDVFKNQKLFEKMEFSTDRAKIAEWAPLVVNGRDENQSIAANYSAEGTDVDF GNLTRQMVQYLREKGVKMEFNRHVEDIKRESDGAWVLKTCNTENHEDHLTLRSRFVFLGA GGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPETAAQHNAKVYGQASVGAPPMSVPHL DTRNVDGQRHLMFGPYAGFRPNFLKQGSLMDLPMSIQMDNLYPMLRAGWANMPLTKYLLG ELRKTKEERFNSLLEYYPEANPDNWELITAGQRVQIIKKDPKKGGVLQFGTEIVAHADGS LAALLGASPGASTAVPLMIKLINQCFPGRIESWSGRLKELVPGYGIKLNDNPTLADEIIS HTSAVLGIHH >gi|241320655|gb|ACQV01000011.1| GENE 10 10546 - 11328 1172 260 aa, chain + ## HITS:1 COG:NMA2212 KEGG:ns NR:ns ## COG: NMA2212 COG0134 # Protein_GI_number: 15795081 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 260 1 260 260 421 85.0 1e-118 MTDILNKILATKAEEVAAQKAAVSLEDIKAQAQAAAPVRSFIGSIREKHAQNLPAIIAEV KKASPSKGLIRPDFHPAEIAVAYEKAGAACLSVLTDEPYFQGSPEYLKQARAAVALPVLR KDFIIDEYQIYQARAWGADAVLLIAAALEAEQLERFEAVAHELGMTVLLELHDASELEKC RNMTTPLWGVNNRNLRTFEVTLQQTLDLLPELNGKTVVTESGIRNKEDVDFMRSHGVHTF LIGETFMRADDIEAEVKKLF >gi|241320655|gb|ACQV01000011.1| GENE 11 11392 - 11763 557 123 aa, chain + ## HITS:1 COG:SA0230 KEGG:ns NR:ns ## COG: SA0230 COG3189 # Protein_GI_number: 15925941 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 4 115 5 116 118 84 38.0 4e-17 MFTVQRIYAYQPNPEQTAVFIDRLYPRGVRKEVFATALWLKDITPSANLRRWYHENPAQN FDGFVSRYHEELHNETAQAAIKQLLDLERQHGNILLLTAVKDPRHSHVSALAQFLGARFE YRD >gi|241320655|gb|ACQV01000011.1| GENE 12 11836 - 12363 822 175 aa, chain - ## HITS:1 COG:L163025 KEGG:ns NR:ns ## COG: L163025 COG2323 # Protein_GI_number: 15674091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 173 36 209 211 204 56.0 7e-53 MDQVQNFVLGGIISDVIYSDSIGLLQFFPVLILWTLLVLSLKFIKNHNRWVKSVIDGKSV WIIVNGKVQAEECMKNGISVHDLMFKLRAAGIYEISSVKRAVMEQNGQFTVIQYGDESLR YPLITDGQVDPDILEIIKRDEEWLQQELDRLHLEASQVYIGEYIDGKLVAHRYPS >gi|241320655|gb|ACQV01000011.1| GENE 13 12522 - 13865 2360 447 aa, chain - ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 903 98.0 0 MSQNHTILQNLPIGQKVGIAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIP KKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGMAYFNTTPLGRAVTGTMLVSA MKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPWLDQQFIDELGGRHEMSEFLI ANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIKIVKPIMGVAFWDENVEVKPEEV SVLFEEGVPVALNGKEYADPVELFLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGM ALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAIT GEVTLELRRGNDYSILNTESPNLTYQPERLSMEKVEDAAFTPLDRIGQLTMRNLDITDTR AKLGIYSQSGLLSLGEGSVLPQLGNKK >gi|241320655|gb|ACQV01000011.1| GENE 14 13976 - 14776 961 266 aa, chain + ## HITS:1 COG:NMB2128 KEGG:ns NR:ns ## COG: NMB2128 COG1058 # Protein_GI_number: 15677941 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Neisseria meningitidis MC58 # 1 265 1 265 266 471 86.0 1e-133 MNAFNLIIIGDEILHGSRQDKHFSFFKALLESHGLKLNQVQYLPDEPDLLVKQLRRSFSD GLPTFVTGGIGSTPDDHTRQAAAAALDLPVVRHPEAAKFIEGVTQKRGEPLDSPEHAQRL KMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPMAEWVLDTYYADRFNQTERGS RSVYVFDQPESRITPIMEHLERTYAGIRSYSLPTVGRTDSDGRYTPPHIEFGIKAEGEAC RLLDAAWEDALQGLQAIGATLKETVE >gi|241320655|gb|ACQV01000011.1| GENE 15 14776 - 15402 573 208 aa, chain + ## HITS:1 COG:XF2574 KEGG:ns NR:ns ## COG: XF2574 COG0671 # Protein_GI_number: 15839163 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Xylella fastidiosa 9a5c # 24 208 38 222 227 77 28.0 2e-14 MHLSPAQSRRALTFASLLFLPPTLIIGIWLAQYGGFAFEPPLMHAVHAYAGTWFDPIATV LHYLGKTAIAVPLIGAVAAALYFADKKREALFCVLAALVPTLNMLIVKVWFARERPLLWP RLIEESNFSFPSGHSTFSAAIAVMLILLCRRTRYRRAAWIGGISFALLTGFSRIYLGVHY PTDVWAGWTNGTLTALLVYMLIFRPSEK >gi|241320655|gb|ACQV01000011.1| GENE 16 15415 - 16365 851 316 aa, chain + ## HITS:1 COG:NMB0276 KEGG:ns NR:ns ## COG: NMB0276 COG0429 # Protein_GI_number: 15676200 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Neisseria meningitidis MC58 # 6 315 6 314 318 477 75.0 1e-134 MNTRSPNTPYWLRNGHADTLFAKLLQGKAPDYRRELLPDSTGKTQVAYDFVDSADPDAPL VVLFHGLEGSSESHYAVELMKAVQQRGWNGVVAHFRSCGGIENTAPVFYHLGDTPEIAFM LNTLARRYSTIYAVGVSLGGNALAKYLGEQGSNAVPRASAVVSAPVDAVAAGTRFDQGMT RLIYTRYFLNSLLPKAQAIPQFQTALSQQNCKTLGDFDDRFTAPLHGFADRHDYYRRNSC KPFLKGVDTPLLLLNAVNDPFLPPEALPTGRDVSSAVTLLQPAYGGHVGFVSRDQGRLNL QWLPQTVLDYFKQYQP >gi|241320655|gb|ACQV01000011.1| GENE 17 16460 - 16753 638 97 aa, chain - ## HITS:1 COG:no KEGG:Nmul_A1942 NR:ns ## KEGG: Nmul_A1942 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: N.multiformis # Pathway: not_defined # 1 84 1 84 95 129 76.0 4e-29 MKSFEKIENIRDIRKKLGLNQMDFWSRIGVTQSGGSRYESGRNMPKPVRELLRLVHIERV DLAKVNRDDLAVASLLKNRDPELYASLKKEAKADKGK >gi|241320655|gb|ACQV01000011.1| GENE 18 17158 - 17937 1437 259 aa, chain - ## HITS:1 COG:NMA0337 KEGG:ns NR:ns ## COG: NMA0337 COG0024 # Protein_GI_number: 15793347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 516 95.0 1e-146 MNEVIIKTPEEIEKMRELGRLVAEALDYIGQFVKPGVTTNEIDKLVYDYHVNVQGGYPAP LNYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIVNIDLTIKKDGFHGDSSRMFTVGKV SPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAENAGYSVVQEFCGHGIGRGFH EAPQVVHYGRKGEGLVLKPGMIFTIEPMINQGKRHLRILNDGWTVVTKDRSLSAQWEHEV LVTETGYEILTISPASGKP >gi|241320655|gb|ACQV01000011.1| GENE 19 18001 - 18606 728 201 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759054|ref|ZP_04757165.1| ## NR: gi|241759054|ref|ZP_04757165.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 201 27 227 227 266 100.0 5e-70 MSKNNKTPFQLKPKHLIRALFLVSFIAVAALVAGVFSTLNSGKTDVPEKSPAEQTDTRIE VWRPNGTVEPETVQPAKDGDAKTASGNPVVPQDEKGEKAEEGVKNDRAAAHRGKRTENKR TEADKSENTPSDNSSPAAQNKPKADSQPVENKAASNKPAAQAVENKPEKAKAPESKPTPK AEPGAKPQAKPRNKDNLDNLF >gi|241320655|gb|ACQV01000011.1| GENE 20 18674 - 19285 1207 203 aa, chain - ## HITS:1 COG:NMB2091 KEGG:ns NR:ns ## COG: NMB2091 COG2823 # Protein_GI_number: 15677911 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Neisseria meningitidis MC58 # 5 201 4 200 202 283 81.0 2e-76 MKNIKRYALPVLTATLLSLSLSGCVGALIGGAAVGTKSAVDRRTTGAQTDDNVMALRIET TARSYLRQNNQVQGYTPKLNVVGYNRHLLLLGQVATEGEKQFVERIARSEQAAEGVYNYI TVASQARSLGDVTNDTWGTSKVRASLLGLSPATQARVKIVTYGNVTYVMGILTPDEQARV TQKVSTTVGVQKVVTLYQNYVAN >gi|241320655|gb|ACQV01000011.1| GENE 21 19359 - 19952 1030 197 aa, chain - ## HITS:1 COG:NMA0340 KEGG:ns NR:ns ## COG: NMA0340 COG0279 # Protein_GI_number: 15793350 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Neisseria meningitidis Z2491 # 1 197 1 197 197 355 96.0 2e-98 MTTLQERVSAHFAESIRAKQEAEKVLVEPTVQAAELMLQCLMNDGKILACGNGGSAADAQ HFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVFSKQVRALGRAGDVLVGIS TSGNSANVIEAIKAAHERDMHVIAMTGRDGGKIAAMLKDTDVLLNVPYPRTARIQENHIL LIHAMCDCIDSVLLEGM >gi|241320655|gb|ACQV01000011.1| GENE 22 19957 - 20304 300 115 aa, chain - ## HITS:1 COG:NMA0341 KEGG:ns NR:ns ## COG: NMA0341 COG0792 # Protein_GI_number: 15793351 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Neisseria meningitidis Z2491 # 1 115 1 115 115 203 84.0 7e-53 MRLNHKQGAAAEDAALAFLLGKGCSLLARNWHCAYGEIDLIVKNGGTIVFVEVKYRKNRG FGGAAYSISPSKLLKLQRSVEYYLQKHGLNHAPCRLDAVLIEGDGQPEWIQNITG >gi|241320655|gb|ACQV01000011.1| GENE 23 20370 - 21248 919 292 aa, chain + ## HITS:1 COG:NMB2088 KEGG:ns NR:ns ## COG: NMB2088 COG0313 # Protein_GI_number: 15677908 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 291 1 291 291 454 82.0 1e-128 MYTKHLQKAVDSIEKQTLYVVATPIGNLADITLRALAILQKADIICAEDTRVTAQLLSAY GIQGKLVSVREHNEQQMADKIIAHLSDGLSVAQVSDAGTPAVCDPGAKLAARVREAGFKV VPVVGASAVMGALSVAGVTESDFYFNGFLPPKSGERQKLLAKWAEADFPIVMFETPHRIE ASLADMVAQFPERQLTLAREITKTFETFLSGTVAEIQAALKNDSNQTRGEMVLVLHPAVK EKHSDLPEAAQNTMKILAAELPTKQAAELAAKITGENKKALYDLALEWKKQG >gi|241320655|gb|ACQV01000011.1| GENE 24 21406 - 22215 1292 269 aa, chain - ## HITS:1 COG:NMB1828 KEGG:ns NR:ns ## COG: NMB1828 COG2819 # Protein_GI_number: 15677664 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 7 269 48 310 310 310 57.0 2e-84 MPIRPNWQTATLLQAEETSVTSAHTGRTYRIQAATLGERPAGGYPVLYILDGDAFFPAIL NMAQSLLINPITKSHAACLIVGIGYTGGTIRDLSQRALDYTPPLPDSAPESERKQYGQAD RFSRFIDDELSALLDSKYRIDTQNQAVFGHSFGALYGLYSLFTRPERFRHYLLVSPSIWW QDRRVLDWLPGTLPQGVGIRLGAGEHEGRNNRPDQTSRGMVAQAKILAGTLHHLGADVRF TLYPNANHGNAPFYALTDCIEYLRNAWQR >gi|241320655|gb|ACQV01000011.1| GENE 25 22330 - 23319 1602 329 aa, chain - ## HITS:1 COG:NMB0281 KEGG:ns NR:ns ## COG: NMB0281 COG0760 # Protein_GI_number: 15676205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis MC58 # 46 329 65 348 348 361 70.0 1e-99 MNFKPLILVAALTLAVGAHAAPKAKATKARAAKAAAVSATTMPAVQSGVHLSDGIAAVVD NEVITHRQVAQAVAQARQTMPKGTQMDANELRQQVLAQMINQSLILQAGKRRNIQATDSE IEAVIAHNPNIKNPSAAVRQDIADSIIVEKVRQQAIMQNSRVSDSEVARYIEQAKQQGVT LPEADPVRQYHAQHILIKADNDNAAVGAESTIRKIYSQARSGADFGGLARQYSQDSSAGN GGDLGWFADGMMVAPFEEAVHKLKPGQISAPVRTQFGWHIIKLNDVREAGTPEERQQNAV RQYLSQQKAQQATTNLLRELHSSSYVDVR >gi|241320655|gb|ACQV01000011.1| GENE 26 23316 - 25688 3332 790 aa, chain - ## HITS:1 COG:NMA2207 KEGG:ns NR:ns ## COG: NMA2207 COG1452 # Protein_GI_number: 15795076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Neisseria meningitidis Z2491 # 1 781 10 788 802 1005 61.0 0 MVLALIMGFGATAVRAEDASVPQAEDYTPAHTATSKPAQTSQSEADPLSLGSTCLFCDHE DAKPVETAEIKRSGEPALPADYTRVNADKIEGQTQVGVRAEGDVIVERNADVLNSDWAQY DQATDTVTAGDRFTLYQNGSTVSGDQLVYNLKDQTGSGTAVRLNTEQGGRRLQSVSEKAE LKGKGLYKLINTKFNTCSPGDASWYIQAQSIEADESTGIGVAKHASLVFGGVPVLYTPWA DFPINGNRKSGLLVPTIATGSDGLELSLPYYFNLAPNLDATIRPGIISKRGVQLGGQVRY LQPNYSGEVDGDWMPNDQKSVHNNRYQFKWKHQQQLNSKISGGINYNQVSDDDYYRNFYG REDIARNVNLDRQAWLNYSDKLLGGSFDGSLRVQKYQTLANQDGYKDEPYAIMPRLTGRW QSHIGKAQLNVLGQFTHFDHDTKQDGSRVVLYPSVKWDFHNQWGYIRPKVGVHATYYSLN GFNGQSGRNVSRVLPIINVDSGLTFERRARLFGGEYLQTLEPRLFYNYIPTKSQNDLPNF DSSENSFTYSQLFRENLYSGNDRINSANSLTLATQSRILNPNTGAELFRAGIGQKFYFKK DNVLPDGNVSNYPRSQSDWVAFAHGNLTPSTRIDLDIHYNQNLSRAESYAAGITYNPEPG KVLSARYKYGRNERIYLQANGDYFYDRLSQVDLAAQWPLSKNLYAVARYNYEIEAKKPLE MLIGAEYKSNCGCWSASLVGQRYVTGENSHKNAVFFNLQLKDLSNIGNNPFEKLRLAIPG YSKTNEVVKQ >gi|241320655|gb|ACQV01000011.1| GENE 27 25785 - 26789 1400 334 aa, chain + ## HITS:1 COG:NMA2208 KEGG:ns NR:ns ## COG: NMA2208 COG3178 # Protein_GI_number: 15795077 # Func_class: R General function prediction only # Function: Predicted phosphotransferase related to Ser/Thr protein kinases # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 590 88.0 1e-168 MQRQTELQNWLESVYPNQPFELSFAAADADFRRYFRATFSDGQTVICMDAPPEKMSVAPY LKVQKLFNMVNVPQVLHVDEALGFMVLNDLGNTTFLAAMNQENSATAHKALLLEAIDELI ELQKASQPGKLPEYDREVMLREINLFPEWFVAKELGRELTFKQRQLWQQTVDTLLPPLLA QPKVYVHRDFIVRNLMLAKGRPGVLDFQDALYGPISYDLVSLLRDAFIEWEEEFVLDLVI RYWEKARAAQLPVPAEFDEFYRWFEWMGVQRHLKVAGIFARLYYRDGKDKYRPEIPRFLN YLRRVSRRYNDLAPLYALLVELVGDDELETGYTF >gi|241320655|gb|ACQV01000011.1| GENE 28 26872 - 28767 2817 631 aa, chain + ## HITS:1 COG:NMA0074 KEGG:ns NR:ns ## COG: NMA0074 COG0445 # Protein_GI_number: 15793103 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Neisseria meningitidis Z2491 # 4 631 1 628 628 1169 96.0 0 MTYMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKG HLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQEN LDLFQQAVEDITLDGDRISGVMTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGD PAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNAEMHP RQVSCWITHTNLQTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFL EPEGLTTNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASL ETKTIQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDL ITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGHKIGLVGEEQWRMFNEKREAIEREI QRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGAEPECRLPE NVIEQVEIQVKYQGYIDRQNEEIDSRRDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPE TVGQASRISGITPAAVALLMVHLKRGFKGAK >gi|241320655|gb|ACQV01000011.1| GENE 29 28925 - 29512 313 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229245482|ref|ZP_04369543.1| acetyltransferase, ribosomal protein N-acetylase [Catenulispora acidiphila DSM 44928] # 10 190 11 195 197 125 39 6e-28 MADFSSVPVLSFDRVRLEPLTAAHEAGLREAVCDGEVWKLNVTTAPEPEQVADYIRTAIQ TRLAFAVIDEDTGKIVGSTSLYHIDPAIPRLYIGFTWYALSAQRTHINTACKIMLLDYVF DTLNCRCACWQTDNLNTASQRAIERLGAHQDGILRCHKLRKDGSVRDTVEYSLLREEWPQ ARAKLLKKAAAYDAS >gi|241320655|gb|ACQV01000011.1| GENE 30 29607 - 30197 756 196 aa, chain - ## HITS:1 COG:NMB2099 KEGG:ns NR:ns ## COG: NMB2099 COG0212 # Protein_GI_number: 15677919 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Neisseria meningitidis MC58 # 1 193 1 193 193 284 75.0 7e-77 MRNPDKSALRKQFRRARAQMSADERNAATETISRLLKPYIKKGRKIGVYWPMGKELRLDG FVRAAQKRGAKLYLPYIEPNTRRMWFTPYPAHGTKQERKRGRAKLSVPQFTGKKIRVHQL SLLIVPIVGIDKRGYRLGQAGGYYDATLSAMKYRLQTQTLGAGFDCQLTDTLPTEPHDLP LDGFVSESGVLVFKHH >gi|241320655|gb|ACQV01000011.1| GENE 31 30276 - 30518 299 80 aa, chain + ## HITS:1 COG:no KEGG:NMB2100 NR:ns ## KEGG: NMB2100 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 55 1 55 77 90 87.0 1e-17 MWHIVAIGYLFVAVMFSAAQPSIARALIYLFFWAVLPTVFTVFVVTIRRRNRLMKRQEQA EFEAARQKAVQADEKQDGKV >gi|241320655|gb|ACQV01000011.1| GENE 32 30696 - 31424 1227 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225373956|ref|ZP_03751177.1| hypothetical protein NEISUBOT_02251 [Neisseria subflava NJ9703] # 1 242 1 242 242 477 100 1e-134 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQEAA AE >gi|241320655|gb|ACQV01000011.1| GENE 33 31613 - 32401 606 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 2 257 24 276 283 238 50 4e-67 MQKALVEAEGNFDKAEEILRIKSGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDF VAKDAGFVEFANFVAKTAAEKKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTAN QLVAYIHGALATEGVLVEYKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTE QAIASGKPADIAAKMVEGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVISFVRYK VGDGIEKAVVDYAAEVAAAAKV >gi|241320655|gb|ACQV01000011.1| GENE 34 32621 - 33340 1212 239 aa, chain + ## HITS:1 COG:NMA0326 KEGG:ns NR:ns ## COG: NMA0326 COG0528 # Protein_GI_number: 15793338 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Neisseria meningitidis Z2491 # 1 239 1 239 239 424 99.0 1e-119 MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFR GVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKA IQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSAT RYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVHC >gi|241320655|gb|ACQV01000011.1| GENE 35 33504 - 33974 650 156 aa, chain + ## HITS:1 COG:NMA0418 KEGG:ns NR:ns ## COG: NMA0418 COG1576 # Protein_GI_number: 15793423 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 156 1 156 156 294 94.0 6e-80 MNITVLAVGTKMPRWVDEAVGEYAKRFGRDVNYALKEIKPEKRGAGVNAAQGMAAEEKRL LEAIPQGAFLVVLDERGKAPTSVELAQHLKGWQQNGEHVCFIIGGADGMTDRLKQQANMM MRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE >gi|241320655|gb|ACQV01000011.1| GENE 36 34120 - 34761 851 213 aa, chain + ## HITS:1 COG:NMA0582 KEGG:ns NR:ns ## COG: NMA0582 COG0461 # Protein_GI_number: 15793573 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 213 349 90.0 2e-96 MSDFRQDFLKFALAQNVLKFGEFTTKAGRQSPYFFNAGLFNDGASTLQLAKFYAEAIIAS GVKFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAKDHGEGGVLVGAPLKGRVL IIDDVISAGTSVRESVKLIEAEGATPAAVAIALDRMEKGTGELSAVQEVEKQYGLPVVSI ANLNDLFTLLQNNAEFGGFFEPVKAYRERYGAV >gi|241320655|gb|ACQV01000011.1| GENE 37 34859 - 35254 519 131 aa, chain + ## HITS:1 COG:no KEGG:NMA0581 NR:ns ## KEGG: NMA0581 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 131 1 144 144 137 50.0 1e-31 MPACSCPHCKTPHWVKDAQLNVAQGFVVCTRCSGMFKAKDYLSGNLPADPAHLPVAVTDV RLVHNIGAQILKHSKLSRKEISDLLNSALKEEPKAEEQAAVKMRKDGFNWTLASLIALTV LIMQLFYLALL >gi|241320655|gb|ACQV01000011.1| GENE 38 35251 - 36564 1318 437 aa, chain + ## HITS:1 COG:NMA0580_1 KEGG:ns NR:ns ## COG: NMA0580_1 COG0548 # Protein_GI_number: 15793571 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis Z2491 # 7 283 7 283 283 297 56.0 3e-80 MSAIAHFVASFREAAPYIQYLRGKTMVVGVTDSLLEGETLIRLAADLNLLASLGLRLVLV HGSRHLLDKLASGRNFVPKYSGSRRITDEATLMEVKQVAGIIRSDVEAALFSSVSAQQRS KPPVIACGNFITARPLGVIDGVDMGYTGTVRKIDTEEIRLRLDGGAVVLISPLGHSYSGK TFNLSMCETAQEVAMALQAEKLVFLTEEAGIRRADGSLANTLSVGEVQELVRDNPDAPAD LLHAAVGALENGVSRVQILNGREDGSLLRELFTREGSGTSIAREPFVSIRQARSDDIPHI IALIRPLAEQGILLHRSREYLENHISSFSVLEHDQNIYGCVALKTFSEPDCGELACLVVS PEARDGGYGELLLEHLFQKARALNIKTLFALSTHTGEWFVERGFQTASADDLPAERRQEY NANGRNSKVFVYDLQAV >gi|241320655|gb|ACQV01000011.1| GENE 39 36609 - 37388 1100 259 aa, chain + ## HITS:1 COG:NMA0348 KEGG:ns NR:ns ## COG: NMA0348 COG0708 # Protein_GI_number: 15793359 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 525 98.0 1e-149 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGKLSVISLYLPSGSSAEERQ QVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIG KVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYK DEKFSDHAPLVVEYDYVAE >gi|241320655|gb|ACQV01000011.1| GENE 40 37375 - 37719 433 114 aa, chain + ## HITS:1 COG:no KEGG:NMO_0086 NR:ns ## KEGG: NMO_0086 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 114 3 116 116 154 79.0 9e-37 MLPNKVLGKYDWNVNGKTGVGAAWVVAAFVLPMLVWAVFMLARMSGWVAPTKANPTWALV WLLFSLPCLLIAAKCFAWKGWRLIANIVLCLAICAILSVPAALLIAFTLNDLLK >gi|241320655|gb|ACQV01000011.1| GENE 41 37730 - 38263 703 177 aa, chain + ## HITS:1 COG:no KEGG:NGK_2244 NR:ns ## KEGG: NGK_2244 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 176 1 176 176 233 71.0 3e-60 MQSFELEEMALFLIRDADEAEMWIDRWTVSYPIVHTAEADGRQTISEWQHAIQTAFDHIV SRNIAVVAHGAGVSAFLAWLYQADILTQKRLTNIILVSPRPEAFPEDEIHTFQRVRCPCR TALVISETNGTPRDWAQEQADRWHARLLQSPHSGQLNGALGGWQWGMKLMQEMLLSQ >gi|241320655|gb|ACQV01000011.1| GENE 42 38423 - 40534 2977 703 aa, chain + ## HITS:1 COG:NMB0293 KEGG:ns NR:ns ## COG: NMB0293 COG1629 # Protein_GI_number: 15676215 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 1 703 1 703 703 1330 96.0 0 MQIPFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQSDTSVLKGYINYDEAA VTRNGQLIKETPQTVDTLNIQKNKNYGTNDLSSILEGNAGIDAAYDMRGESIFLRGFQAD ASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTNGGGVINMVSKYANFKQSRNI GAVYGSWANRNLNMDINEVLNKNVAIRLTGEVGRANSFRSGIDSKNVMVSPSITVKLDNG LKWTGQYTYDNVERTPDRSPTKSVYDRFGLSYRMGFAHPNDFVKDKLQVWRSDLEYAFND KWRAQWQLAHRTAAQDFDHFYAGSENGSLIKRNYAWQQTDNKTLSSNFTLNGDYNIGRFE NHLTVGLDYSREHRNPTLGFSRAFSASIDPYDRASWPASGRLQPVLTQNRHKADSYGIFV QNIFSATPDLKFVLGGRYDKYTFNSENKLTGSSRQYSGHSFSPNIGAVWNVTPAHTLYAS YNKGFAPYGGRGGYLSIDTSSAAVFNADPEYTRQYETGVKSSWLDDRLSTTLSAYQIERF NIRYRPDAQNDPYTWAVGGKHRSRGVELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPN RVGIHLDNTSNVTGNLFFRYTPTENLYGEIGVTGTGKRYGYDSRNKEVTTLPGFARVDAM LGWNHKNVNVTFAAANLLNQKYWRSDSMPGNPRGYTARVNYRF >gi|241320655|gb|ACQV01000011.1| GENE 43 40705 - 41400 960 231 aa, chain + ## HITS:1 COG:NMA2191 KEGG:ns NR:ns ## COG: NMA2191 COG0526 # Protein_GI_number: 15795061 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 19 231 19 231 231 370 96.0 1e-102 MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASAPAAPAPLTEGVNYTVLSTPIPQ QQAGKVEVLEFFGYFCPHCAHLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAV EMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAFDGKKVLAAFEAPESQARAAQ MEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ >gi|241320655|gb|ACQV01000011.1| GENE 44 41567 - 42937 1801 456 aa, chain - ## HITS:1 COG:NMB0295 KEGG:ns NR:ns ## COG: NMB0295 COG0541 # Protein_GI_number: 15676217 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 794 95.0 0 MLDNLTNRFSKVLKNIRGQSTLTEDNIKEALREVRLALLEADVALPVVKEFVNTVKEQAL GQEVVGSLTPDQAFIGVVNQALVELMGKENKTLDLSVSPPAIVLMAGLQGAGKTTTVGKL ARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFFPSDTNQKPVEIATAAVDYAK KHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETLFVIDAMLGQDAVNTAQAFNEAL PLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVGEKINGLEPFHPDRLASRILGMGDV LTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDFKEQIQQMRNMGGLENLMSKMPGELGQ ISKQIPEGTAEKAMGKVEAIINSMTPKERANPALLKASRKRRIAMGAGTTVQEVNKLLKQ FEQMQQMMKMFSGNGLGKLMRLAKGMKGMKGMFPGL >gi|241320655|gb|ACQV01000011.1| GENE 45 43120 - 43932 668 270 aa, chain + ## HITS:1 COG:NMB0296 KEGG:ns NR:ns ## COG: NMB0296 COG4137 # Protein_GI_number: 15676218 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 322 71.0 6e-88 MPIVLICLMLVYAGLGAFSWLQHKKHNNKSYPLKTELLILSGALLVHGAALMFPVLQDRV LITGFGYSLSLIVWLMLMMYCLGSFFYCLRGVQLLLYPCAALTLLLGFLFPGDFSGRQIV DLLPLSHIASSLLAYGLFGIVTLFAILILLLDRNLHKRRFSALVSFLPPLLSLEKLMFQG MWAGFVLLTYSVISGTFFAETVFGKPMTFTHKTIFSIMSWLIYGALLLKHSMTAWRGKKA AVWTIVGFVSLIFAYVGSKFVLEIVLQRIG Prediction of potential genes in microbial genomes Time: Thu May 26 11:29:01 2011 Seq name: gi|241320630|gb|ACQV01000012.1| Neisseria flavescens SK114 ctg1118407793867, whole genome shotgun sequence Length of sequence - 9800 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 10, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 253 402 ## gi|255067163|ref|ZP_05319018.1| transposase + Prom 433 - 492 2.6 2 2 Tu 1 . + CDS 591 - 1052 415 ## COG2801 Transposase and inactivated derivatives + Prom 1092 - 1151 4.7 3 3 Tu 1 . + CDS 1256 - 2371 1558 ## COG3203 Outer membrane protein (porin) + Term 2389 - 2428 9.1 - Term 2375 - 2414 9.1 4 4 Tu 1 . - CDS 2435 - 3058 1046 ## NMCC_0636 periplasmic protein - Prom 3146 - 3205 3.1 + Prom 3067 - 3126 5.5 5 5 Op 1 . + CDS 3156 - 3380 303 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 6 5 Op 2 . + CDS 3393 - 3986 636 ## NMO_0568 putative lipoprotein 7 5 Op 3 . + CDS 4084 - 5118 1141 ## COG0418 Dihydroorotase + Term 5144 - 5187 8.5 - Term 5134 - 5171 3.0 8 6 Tu 1 . - CDS 5252 - 5815 741 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold - Prom 5866 - 5925 5.1 9 7 Tu 1 . + CDS 6200 - 6826 726 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 6844 - 6889 9.4 - Term 6838 - 6871 5.1 10 8 Tu 1 . - CDS 6885 - 8465 849 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 8605 - 8664 4.7 11 9 Tu 1 . + CDS 8682 - 9410 1213 ## COG0217 Uncharacterized conserved protein + Prom 9415 - 9474 2.1 12 10 Tu 1 . + CDS 9528 - 9798 381 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|241320630|gb|ACQV01000012.1| GENE 1 2 - 253 402 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 83 284 366 366 157 92.0 3e-37 THLRRWIRAYQEGGIGALEHPQSKTMTEHRKNPFIADKPDHEKTQAELIEELCHMRAKVA YLKELKALSQKQTEKDKAKPSKH >gi|241320630|gb|ACQV01000012.1| GENE 2 591 - 1052 415 153 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 148 66 213 216 148 52.0 3e-36 MTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQ GVLYRTAEYRELLAQHSMIQSMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQ IDDYIDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|241320630|gb|ACQV01000012.1| GENE 3 1256 - 2371 1558 371 aa, chain + ## HITS:1 COG:NMB2039 KEGG:ns NR:ns ## COG: NMB2039 COG3203 # Protein_GI_number: 15677862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis MC58 # 1 371 1 331 331 195 36.0 2e-49 MKKSIIALVIAGLPLAASAEVILYGQIKSSVTVGQVKIKGDAGSETSSTATSINDNTSRI GFKGSENLGGDLKAIWQVEQKTAITGGSQGFANRDSFIGLQGKFGKVRAGKLSNMLNEMD TIDPWMYKTNAAGLGIFTRTGNRNAAVRYDSPDFGGFKFNVSYAPRDNRNPSDKYTHTQA AKDQYTGGVSFSKNGFTANAAYGHYNGAYTDNSGKVKAAQIAKVETYYDKDNLFVGGGVH YAKGHETANDYLGYFTDGFNEYKGSDITADSGKSEAVKVVDAAVTVGYKLGNVTPRITYA HGWPAKGVNSGEKLVDKFDQVVVGGQYTFSKRTGVVAQLAYLKVGNKTRLTAANKGGVEQ KAASVGLYHKF >gi|241320630|gb|ACQV01000012.1| GENE 4 2435 - 3058 1046 207 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0636 NR:ns ## KEGG: NMCC_0636 # Name: cnp1 # Def: periplasmic protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 5 207 1 203 203 297 68.0 1e-79 MELSMRRFALLALSLATTQAFALGFSQKDTLTNTRYQESPEEVAAREFKEHKAELPPLPD TQSGDWFDLYVNETYGKQPKILLSSLQIMPAPDNSIRYILNVRSDKGYDNLSVEGLYCAR TSFTYSNDKRSSYKVFAYGDTVNHRWIEPRKGDWKLIGNAFSRNDALHTALYQAFCIDGM PTTVEGLVQRLKERGGRHGTTLTNHDK >gi|241320630|gb|ACQV01000012.1| GENE 5 3156 - 3380 303 74 aa, chain + ## HITS:1 COG:NMA0882 KEGG:ns NR:ns ## COG: NMA0882 COG0425 # Protein_GI_number: 15793851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis Z2491 # 1 74 1 74 74 128 85.0 3e-30 MNTQTLDVIGLKCPLPILRAKKALAQMQEGEVLTVLATDGGAPGDFEAFCRQTGHVLLES SEADGVFKLVLKHK >gi|241320630|gb|ACQV01000012.1| GENE 6 3393 - 3986 636 197 aa, chain + ## HITS:1 COG:no KEGG:NMO_0568 NR:ns ## KEGG: NMO_0568 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 7 197 14 201 201 146 42.0 5e-34 MSKAVALSAAVLAVCLSACGNEGVSPQNAADYAQNVTDLFRQSCVATDGDAALVGEFANA NKLVLLSKKDIADLPAGMMDLEALSIWKKTVNGADYYLSLTEDSCSVRTAKADDHLIFKQ FLALAENPPQGLNAELRADNLAETPLPMRQISYAWRASGSPKETLLTVKTTSSEHFPVQA VFYLTHHSYDNKAPVLP >gi|241320630|gb|ACQV01000012.1| GENE 7 4084 - 5118 1141 344 aa, chain + ## HITS:1 COG:NMB0682 KEGG:ns NR:ns ## COG: NMB0682 COG0418 # Protein_GI_number: 15676580 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Neisseria meningitidis MC58 # 1 344 1 344 344 643 95.0 0 MQTLTIIRSDDMHLHLRDGDALKAVVSYTARQMGRAVIMPNLKPPVVSVADAQAYKERIM AALPEGSSFQPLMTLYLTDNATPELVREAKAAGIVAFKLYPAGATTNSDSGVTDLFKLIP VLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIERVMKPVLAQVPNLKVVFEHITTAEAA RLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCLPVLKRETHRQALVAAVTGDKAH KFFLGTDSAPHAKTAKENACGCAGMFSAMTAIELYAEVFEKAGALDKLEAFASKNGPRFY GLPENTDTITLVKQTQTVPASVPYGDGELVPMRAGGEIEWTVQY >gi|241320630|gb|ACQV01000012.1| GENE 8 5252 - 5815 741 187 aa, chain - ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 1 181 1 181 190 122 35.0 4e-28 MNRRVYIVHGFEGNPHGNWFDWLCAQVKSTGAQAISLTMPNPDKPSTTAWQFTLDQHIGK PDAHTFLVGHSLGCITLLHFLSRQQPQKIGGLLLAAGFADTLPPLPALDAYIKAASPDFD ILRKIDMPKHCLVSDNDTHVPPELTLDMAAKLKSPVTHIPEGGHLMASDGFTQLPQAWEA LKPMLTD >gi|241320630|gb|ACQV01000012.1| GENE 9 6200 - 6826 726 208 aa, chain + ## HITS:1 COG:NMB1646 KEGG:ns NR:ns ## COG: NMB1646 COG1272 # Protein_GI_number: 15677495 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Neisseria meningitidis MC58 # 1 208 1 208 208 219 65.0 4e-57 MYHGERFNAYSHLAGFLLAVAALVLMLVKAVESADGYRIAGALTYGICLLLLYLGSTLYH SIPQPKAKAILQKVDHCMIYLLIAGSYTPFTLITLHGGWGWSLFSVSWGLALLGIVQELT IGRKSEKRLLSMVIYVLMGWLIVVAVWPLIQSLSAGGLFWLVLGGVLYSVGIYWFINDTK IRHGHGIWHLFVLAGSLTQFISIYFYVL >gi|241320630|gb|ACQV01000012.1| GENE 10 6885 - 8465 849 526 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 55 506 3 445 456 331 40 1e-90 MMTKPVKIVNNLTGIEWQNGLLADVANHEKMSGSSYPYHFIFIVFIKGFIMEEILSALVG AVNQVLWDYLLIYALIGIGLFFTLYLGAPQVTKLGAGFKAVFGGLFSKKDKDHEGKSLSQ FQALAVAISAQIGTGNVAGVATAITAGGPGAIFWMWLSAILGMSTIFAEAVLAQKYRVVS HGKYIGGPAFYITHGLTPKIGRGAARFLSGFFSIALIIALGFIGNATQSNSIASAINLAF DIPPMAVGIALAVFAGLIIIGGINRIAGIAQFVVPFMAVIYILCAVIILFKFSDHIIPMF HNIFVAAFNPEAVLGGAAGIGMREAVRFGVARGLFSNEAGMGSTPHAHATANVKHPVQQG MAAFIGIFIDTLMVCTATALIILLTDANLSGETGAAVTQLAFNKAFPGFGSKLLAVCLTF FAFTTIIGWYYFGESNIRFLFRGKHLGIYRALVLVAIVLGTLGKVDLVWSMSDMFNGFMV LPNLIALFLLRKEIRAVYDDYLAQTKAGKELTYNYEFHEFHDKNPG >gi|241320630|gb|ACQV01000012.1| GENE 11 8682 - 9410 1213 242 aa, chain + ## HITS:1 COG:NMA1902 KEGG:ns NR:ns ## COG: NMA1902 COG0217 # Protein_GI_number: 15794787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 446 98.0 1e-125 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN MPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKN GGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVITNDDGSIEVITAPNDW AAVKSALEAAGYKSVDGDVTMRAQNETELSGEDAVKMQKLIDALEDLDDVQDVYTSAVLN LD >gi|241320630|gb|ACQV01000012.1| GENE 12 9528 - 9798 381 90 aa, chain + ## HITS:1 COG:NMA1115 KEGG:ns NR:ns ## COG: NMA1115 COG3039 # Protein_GI_number: 15794062 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 88 12 99 335 183 97.0 5e-47 MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTHYLRDHRGRPAYPLLSMFKAVLLGQWHS LSDPELEHSLITRIDFNLFCRFDELSDPRL Prediction of potential genes in microbial genomes Time: Thu May 26 11:29:16 2011 Seq name: gi|241320614|gb|ACQV01000013.1| Neisseria flavescens SK114 ctg1118407793874, whole genome shotgun sequence Length of sequence - 11827 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 7, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 705 899 ## COG0207 Thymidylate synthase + Prom 906 - 965 9.4 2 2 Tu 1 . + CDS 1118 - 2452 2197 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 2475 - 2508 6.1 - Term 2463 - 2496 6.1 3 3 Tu 1 . - CDS 2517 - 4556 2259 ## COG1200 RecG-like helicase - Prom 4581 - 4640 4.2 - Term 4593 - 4640 13.7 4 4 Tu 1 . - CDS 4805 - 7576 1222 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 7688 - 7747 2.5 - Term 8045 - 8087 8.1 5 5 Op 1 9/0.000 - CDS 8108 - 8542 835 ## COG1952 Preprotein translocase subunit SecB 6 5 Op 2 . - CDS 8564 - 8848 390 ## COG0695 Glutaredoxin and related proteins - Prom 8960 - 9019 2.9 + Prom 8936 - 8995 5.4 7 6 Tu 1 . + CDS 9059 - 10552 2171 ## COG1530 Ribonucleases G and E + Term 10561 - 10599 10.2 - Term 10546 - 10590 13.2 8 7 Op 1 . - CDS 10610 - 11278 1316 ## NGK_0287 hypothetical protein 9 7 Op 2 . - CDS 11309 - 11686 232 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN Predicted protein(s) >gi|241320614|gb|ACQV01000013.1| GENE 1 3 - 705 899 234 aa, chain - ## HITS:1 COG:NMA1963 KEGG:ns NR:ns ## COG: NMA1963 COG0207 # Protein_GI_number: 15794846 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis Z2491 # 1 231 1 231 264 462 92.0 1e-130 MKAYHDLMRHVLDNGIDKSDRTGTGTRSVFGYQMRFDLSEGFPLLTTKKLHLRSIIHELL WFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWPAPDGRHIDQIANVVEQIK KNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIAS YALLTMMMAQVCGLGAGEFIHTFGDAHLYSNHIEQAQLQLSRDFRSLPAMKSTL >gi|241320614|gb|ACQV01000013.1| GENE 2 1118 - 2452 2197 444 aa, chain + ## HITS:1 COG:NMA1964 KEGG:ns NR:ns ## COG: NMA1964 COG0334 # Protein_GI_number: 15794847 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 444 1 444 444 861 95.0 0 MTDLNTLFTNLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQQSLLERIVEPERVIMF RVAWMDDKGQVQVNRGYRIQMNSAIGPYKGGLRFHPTVDLGVLKFLAFEQVFKNALTTLP MGGGKGGSDFDPKGKSDAEVMRFCQAFMIELYRHIGADTDVPAGDIGVGGREIGYLFGQY KKIRNEFASVLTGKGLEWGGSLIRPEATGYGCVYFAQAMLETRNDSIEGKRVLISGSGNV AQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQLAALIELKEVRRERVATYAKEQGL QYFENQKPWNIAAEVALPCATQNELDADAAKILLANGCYVVAEGANMPSTLGAVEQFIKA GILYAPGKASNAGGVATSGLEMSQNAIRLSWTREEVDSRLFDIMHNIHESCLKYGKVGDK VNYVNGANIAGFVKVADAMLAQGF >gi|241320614|gb|ACQV01000013.1| GENE 3 2517 - 4556 2259 679 aa, chain - ## HITS:1 COG:NMB1788 KEGG:ns NR:ns ## COG: NMB1788 COG1200 # Protein_GI_number: 15677628 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Neisseria meningitidis MC58 # 1 679 2 680 680 1216 93.0 0 MTPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEG EVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQMAAGKRIRAVGEIKHGFYG DEMIHPKIRDAEGSGLAESLTPVYPTVNGLNQSTLRRIIQTALDVTPLHDTLPDALLGRL KLPHLAESLRLLHSPPPSFTIHQLSDGALPAWQRLKFDELLAQQLSMRLARQKRVSGTAA ALGGDGTLTQALRHALPFALTDAQERVVSEIRRDMAQTHPMHRLLQGDVGSGKTIVAALS VLTAIESGAQAAVMAPTEILAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLAD GTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRLALKNKGRDVHQLMMSATPIPR TLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLNICRKGQQAYWVCPLIE ESETLQLQTATETLEQLQTALPELNIGLVHGRMKAAEKAEVMAQFAAGRLNVLVATTVIE VGVDVPNAALMVIEHVERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIY EHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEEDLHLLEQAREIAPMLIEQNPE IVEAHLARWLSSREGYLGV >gi|241320614|gb|ACQV01000013.1| GENE 4 4805 - 7576 1222 923 aa, chain - ## HITS:1 COG:NMA1663 KEGG:ns NR:ns ## COG: NMA1663 COG4773 # Protein_GI_number: 15794557 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Neisseria meningitidis Z2491 # 1 472 117 593 635 712 72.0 0 MKNTTGINVVRDSGLQTRFLSRGFYVDQIGEDGITTNVSGRSGYTAKIDVSPSTDLAVYD HIEVVRGATGLTQSNSEPGGTINLIRKRPTALFKHTGEISTDHRGSKRLALDVSGSLNNE HTVRGRLVGVHEDHRSFKEGVWNKKDMVYGVIDTDLSDNSMLTLGGTYQKNKDIPDFAGV ILPCEDQKTAAFSSSPACNNPLKLPRNTYLGETSWSRLNADKYNIFSGFKHVFDNGWQLN AEISYTRNDSDAKVGQFFLKNEHAAGISASAATGFLTEKGEVIPFEPKDKALAKLKEYRD GVTKTYEEKKADYVAHRFDASAFEQYRSQRAAARRAGFDQCMQDIGLDFLCNDWQDPGVE VDKKEFVDKELAKQGIINNAEGLFPNRLYDSAYNLRYTYNRRYNFMPLHYTKHDVQWGFK LDLTGNYRLLGREHDFFVGYAYNNEKIRSAYTEIYQNRYFVRPQGYAGAGSCGIHPDGPE RNPLEKGIVEPDWHIYNEKGNNKIYVPECSGAHVTKYTPRLDAEGKPVWTVNDNGERVMV QDPVYELDANGNKIQERDEEGNLKWANQYLKTPLWKTVQVADDHVPALYNYSKYLNTNKT HSLTFSTRFNATNRLHLLGGMHYTRYETTQAKEMPVRYGQPATAFQTESSNKIDKEHYTS KMQSHRFTPYAGITYDLTPQQSLYASYTKIFKQQDNVDVTSKSVLPPLIGTNYEIGWKGS FLQGRLNASLALFVLQQKNRTVVDFGFVPDTSRNGGSFQTIAKPVGKVKSSGAELELAGE LSENWRIFVGYTYNKSKYKNAAEVNAERLEKNTTADPYNFSNFTPVHMFRLGTSYRLPQT KLTLGGGISAQSRTSSLYNIRQGGYGLIDGFVQYDFHKHGRISLIGTNLADRTYFENNYN RTRGQNNFYGEPRTVKLKLDWHF >gi|241320614|gb|ACQV01000013.1| GENE 5 8108 - 8542 835 144 aa, chain - ## HITS:1 COG:NMA0674 KEGG:ns NR:ns ## COG: NMA0674 COG1952 # Protein_GI_number: 15793657 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 147 244 89.0 5e-65 MSEELQPVFSVERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSTKLEDGFYSVDVTV TVTAKLNEERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACPNILFPYAREAISNSVTRA GFPPVLLAPINFEAIYEEQQGANA >gi|241320614|gb|ACQV01000013.1| GENE 6 8564 - 8848 390 94 aa, chain - ## HITS:1 COG:NMA0673 KEGG:ns NR:ns ## COG: NMA0673 COG0695 # Protein_GI_number: 15793656 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Neisseria meningitidis Z2491 # 10 94 1 85 85 150 83.0 4e-37 MNIGILEEIMQTVTVYTGPYCPYCTMAKRLLQAVGVKEINEIRIDGNPEVFAEMQQLSGQ RSVPQIFIGDTHVGGFTDLYRLQQEGKLDELLNP >gi|241320614|gb|ACQV01000013.1| GENE 7 9059 - 10552 2171 497 aa, chain + ## HITS:1 COG:NMB1791 KEGG:ns NR:ns ## COG: NMB1791 COG1530 # Protein_GI_number: 15677631 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Neisseria meningitidis MC58 # 1 497 13 509 509 879 92.0 0 MLSGIPIPKDAVRPSETVLVNITPQETRVAVLEENNICELHIERNSGHSLVGNIYLGVVK RVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPDETQRIEHMLFEGQSVLVQVIKDPINT KGARLSTQISLAGRFLVHLPQEDHIGISQRIEDDAERSNLRERLNNLLPENACHGYIIRT NAENASDDQLQSDINYLTKVWEHIQKQAKIQPPETLLYQDLPLSLRVLRDMFSFDTHKIL VDSTENHRRMTQFAEQYVQGALGRIELFKGERPLFETHNIEQEIARALQPRVNLNFGSYL IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMA QEVHREAVLQELAKALAFDRTRVTLNGFTSLGLVELTRKRSRENLSQILCEPCPSCQGRG RLKTPQTVCYEIQREIVREARRYDVQAFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS LAVETAYTQEQYDIVLL >gi|241320614|gb|ACQV01000013.1| GENE 8 10610 - 11278 1316 222 aa, chain - ## HITS:1 COG:no KEGG:NGK_0287 NR:ns ## KEGG: NGK_0287 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 8 222 8 223 223 287 70.0 2e-76 MNPIKTTLLTLSLLTASIGAQAAELPQSAVLQYSGSYGIPATMTFTRSGNQYKIVSTIKV PLYNIRFESGGSINGTTLNPSYYKDVRGGKVYAEAKFSGGNITYGKAGDLKTEKSGPAMD LFTLAWQLAANDMRLPSGLKITNGKKLYTVGSMNKVGSESYKLNGGTTPVSKYRVRRGDD TVTYSFASDIDNIPAQISYTDDGKTYNLKLTSVKINGKVVKP >gi|241320614|gb|ACQV01000013.1| GENE 9 11309 - 11686 232 125 aa, chain - ## HITS:1 COG:NMA1755 KEGG:ns NR:ns ## COG: NMA1755 COG0299 # Protein_GI_number: 15794648 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Neisseria meningitidis Z2491 # 10 125 93 208 208 202 81.0 1e-52 MECWNRKGLEFCAHYENRLINIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTPELDC GPIISQGIVPILDGDTADDVAARVLTVEHQLFPQAVADFVAGRLKIEGNRVLNAQRNAAG QSLLA Prediction of potential genes in microbial genomes Time: Thu May 26 11:29:36 2011 Seq name: gi|241320548|gb|ACQV01000014.1| Neisseria flavescens SK114 ctg1118407793880, whole genome shotgun sequence Length of sequence - 50047 bp Number of predicted genes - 57, with homology - 53 Number of transcription units - 34, operones - 13 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 6 - 476 593 ## COG2954 Uncharacterized protein conserved in bacteria + Term 507 - 537 1.2 - Term 495 - 525 2.0 2 2 Tu 1 . - CDS 634 - 1362 1016 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Prom 1434 - 1493 3.6 - Term 1457 - 1497 9.9 3 3 Tu 1 . - CDS 1510 - 2043 961 ## COG3245 Cytochrome c5 - Prom 2093 - 2152 6.9 - Term 2353 - 2398 5.5 4 4 Op 1 . - CDS 2512 - 2784 279 ## COG2827 Predicted endonuclease containing a URI domain 5 4 Op 2 . - CDS 2781 - 3671 893 ## COG0583 Transcriptional regulator - Prom 3694 - 3753 8.7 + Prom 3651 - 3710 7.3 6 5 Tu 1 . + CDS 3792 - 4448 1059 ## COG2910 Putative NADH-flavin reductase + Term 4464 - 4507 12.0 - Term 4631 - 4671 -0.9 7 6 Tu 1 . - CDS 4686 - 5141 149 ## Psyc_0188 hypothetical protein - Prom 5173 - 5232 6.0 + Prom 5135 - 5194 5.3 8 7 Tu 1 . + CDS 5244 - 5474 243 ## Swoo_4018 XRE family transcriptional regulator + Prom 5518 - 5577 4.5 9 8 Op 1 . + CDS 5600 - 6502 1237 ## COG0486 Predicted GTPase 10 8 Op 2 . + CDS 6550 - 6963 558 ## COG0486 Predicted GTPase + Term 6987 - 7022 7.4 - Term 6969 - 7019 8.1 11 9 Op 1 . - CDS 7047 - 7154 107 ## 12 9 Op 2 . - CDS 7197 - 7301 160 ## 13 9 Op 3 . - CDS 7389 - 7496 163 ## 14 9 Op 4 . - CDS 7513 - 7587 87 ## - Prom 7788 - 7847 5.9 + Prom 7907 - 7966 2.5 15 10 Tu 1 . + CDS 7990 - 9792 2366 ## COG1322 Uncharacterized protein conserved in bacteria 16 11 Tu 1 . - CDS 9829 - 10062 156 ## gi|225077522|ref|ZP_03720721.1| hypothetical protein NEIFLAOT_02585 + Prom 9973 - 10032 1.7 17 12 Op 1 . + CDS 10136 - 10330 196 ## gi|241759170|ref|ZP_04757278.1| glycosyl transferase, family 8 18 12 Op 2 . + CDS 10421 - 10624 186 ## gi|225077521|ref|ZP_03720720.1| hypothetical protein NEIFLAOT_02584 + Term 10730 - 10761 3.4 - Term 10718 - 10749 3.4 19 13 Tu 1 . - CDS 10816 - 11637 1254 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 11703 - 11762 5.5 - Term 11850 - 11889 1.5 20 14 Tu 1 2/0.100 - CDS 11900 - 12646 464 ## COG2360 Leu/Phe-tRNA-protein transferase - Term 12651 - 12705 17.5 21 15 Tu 1 . - CDS 12724 - 13158 717 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 13292 - 13351 5.4 + Prom 13144 - 13203 4.9 22 16 Op 1 3/0.100 + CDS 13331 - 13768 620 ## COG2913 Small protein A (tmRNA-binding) 23 16 Op 2 . + CDS 13778 - 14587 1359 ## COG0289 Dihydrodipicolinate reductase + Term 14619 - 14665 8.3 24 17 Op 1 . + CDS 14677 - 15564 1521 ## PROTEIN SUPPORTED gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase + Term 15586 - 15625 4.0 + Prom 15608 - 15667 4.8 25 17 Op 2 . + CDS 15759 - 18149 3660 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 18154 - 18218 18.1 - Term 18275 - 18342 8.9 26 18 Tu 1 . - CDS 18358 - 19386 1324 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 19410 - 19469 5.5 27 19 Op 1 . + CDS 19742 - 20200 825 ## COG0511 Biotin carboxyl carrier protein + Term 20208 - 20254 11.1 28 19 Op 2 . + CDS 20272 - 20463 371 ## bglu_2g14300 hypothetical protein 29 19 Op 3 . + CDS 20493 - 21854 2072 ## COG0439 Biotin carboxylase + Term 21865 - 21936 12.4 + Prom 21971 - 22030 7.4 30 20 Tu 1 . + CDS 22152 - 23666 2287 ## COG0753 Catalase + Term 23761 - 23810 8.0 - Term 23897 - 23942 9.4 31 21 Op 1 41/0.000 - CDS 23969 - 25603 2079 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 32 21 Op 2 . - CDS 25702 - 25989 468 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 26009 - 26068 2.3 + Prom 26319 - 26378 11.3 33 22 Tu 1 2/0.100 + CDS 26406 - 28478 2846 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 28496 - 28542 3.3 + Prom 28488 - 28547 5.3 34 23 Op 1 6/0.000 + CDS 28594 - 29556 1278 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Term 29563 - 29592 -0.5 + Prom 29663 - 29722 5.5 35 23 Op 2 11/0.000 + CDS 29786 - 30754 1183 ## COG4606 ABC-type enterochelin transport system, permease component 36 23 Op 3 . + CDS 30744 - 31715 1195 ## COG4605 ABC-type enterochelin transport system, permease component 37 23 Op 4 . + CDS 31804 - 32430 1123 ## NMO_0174 hypothetical protein 38 23 Op 5 . + CDS 32511 - 33269 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 33282 - 33331 8.5 - Term 33270 - 33319 12.3 39 24 Tu 1 . - CDS 33338 - 34630 1458 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase - Prom 34664 - 34723 4.7 40 25 Tu 1 . - CDS 35090 - 35518 90 ## gi|298369236|ref|ZP_06980554.1| hypothetical protein HMPREF9016_00906 41 26 Tu 1 . - CDS 35649 - 36068 413 ## gi|241759166|ref|ZP_04757274.1| putative lipoprotein - Prom 36096 - 36155 7.9 - Term 36407 - 36467 9.1 42 27 Op 1 . - CDS 36477 - 36998 402 ## gi|241759171|ref|ZP_04757279.1| hypothetical protein NEIFL0001_2062 43 27 Op 2 . - CDS 37066 - 37890 310 ## MAE_16090 hypothetical protein 44 27 Op 3 . - CDS 37929 - 38384 252 ## gi|241759151|ref|ZP_04757259.1| conserved hypothetical protein 45 27 Op 4 . - CDS 38426 - 38935 177 ## gi|241759150|ref|ZP_04757258.1| hypothetical protein NEIFL0001_2065 - Prom 38996 - 39055 8.2 46 28 Op 1 . - CDS 39506 - 39907 353 ## gi|241759187|ref|ZP_04757295.1| putative lipoprotein 47 28 Op 2 . - CDS 39984 - 40349 209 ## XCV1304 putative secreted protein - Prom 40537 - 40596 10.6 - Term 41360 - 41412 14.2 48 29 Tu 1 . - CDS 41432 - 41731 539 ## COG3203 Outer membrane protein (porin) - Prom 41759 - 41818 5.7 + Prom 41747 - 41806 3.6 49 30 Op 1 . + CDS 41829 - 42656 833 ## COG0388 Predicted amidohydrolase 50 30 Op 2 1/0.300 + CDS 42666 - 43211 748 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Term 43223 - 43274 7.3 + Prom 43223 - 43282 4.3 51 31 Tu 1 1/0.300 + CDS 43305 - 44174 1114 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 44207 - 44242 5.0 + Prom 44789 - 44848 3.2 52 32 Tu 1 . + CDS 44873 - 45667 1155 ## COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB + Term 45705 - 45737 3.0 - Term 45687 - 45731 3.0 53 33 Tu 1 . - CDS 45751 - 46560 425 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase - Term 46919 - 46960 7.3 54 34 Op 1 16/0.000 - CDS 46979 - 47833 1536 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 55 34 Op 2 34/0.000 - CDS 47909 - 48640 310 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 56 34 Op 3 17/0.000 - CDS 48642 - 49310 496 ## COG0765 ABC-type amino acid transport system, permease component 57 34 Op 4 . - CDS 49300 - 49959 746 ## COG0765 ABC-type amino acid transport system, permease component - Prom 49986 - 50045 4.2 Predicted protein(s) >gi|241320548|gb|ACQV01000014.1| GENE 1 6 - 476 593 156 aa, chain + ## HITS:1 COG:NMB0309 KEGG:ns NR:ns ## COG: NMB0309 COG2954 # Protein_GI_number: 15676227 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 154 1 154 158 226 69.0 1e-59 MTVEIERRFLLADDSWREAASEPLVLQQGYLSVEKERTIRVRIIGSQAWLTLKGYISDMT RSEFEYEIPLAHAQAMMADMCPFKMEKYRYRVEFKGFVYEIDEYFGDNAPLIVAEIELPS EDTEFPKPSWLDQEITSDGKFTNAYLSKHPYSSWTE >gi|241320548|gb|ACQV01000014.1| GENE 2 634 - 1362 1016 242 aa, chain - ## HITS:1 COG:NMA0410 KEGG:ns NR:ns ## COG: NMA0410 COG2227 # Protein_GI_number: 15793415 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Neisseria meningitidis Z2491 # 6 242 1 237 238 412 81.0 1e-115 MQEQTMSNQHDNVDAGEIAKFSQIADKWWDKNGEFKPLHDINPLRLDYIDGYAGLAGKRV LDVGCGGGILSESMAKRGAEHVTGIDMAEKSLQTAAAHAASQHVANIDYRCIRVEDLAAE QPHSFDVVTCMEMMEHVPDPSAIVQACAKLVKPDGMVFFSTINRNPKSYLHLIVGAEYLL KFVPKGTHDWKKFITPAELARMCRQAGLDTVGSKGMTYNLLSGRYSLCDSTEVNYMVACR PA >gi|241320548|gb|ACQV01000014.1| GENE 3 1510 - 2043 961 177 aa, chain - ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 60 177 162 279 279 127 61.0 1e-29 MNKLLIAVMMMAGLTACSQEAKQETQEAAQAVASEVKNEVASAADATASAAQEAADKVEA AADKAEEAAKPEEAAKPEEKAEAPAADAKPAEAVKVDGKAVYEANCKTCHGGLIPGAPAV GKKEDWAPRIKQGQDTLHKHAIEGFQAMPAKGGNGSLSDDEVKAAVDYMANESGAKF >gi|241320548|gb|ACQV01000014.1| GENE 4 2512 - 2784 279 90 aa, chain - ## HITS:1 COG:NMB0361 KEGG:ns NR:ns ## COG: NMB0361 COG2827 # Protein_GI_number: 15676276 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 90 1 90 91 123 65.0 8e-29 MNAENWRVYLILCENGAFYCGISNRPQERFAAHLSGKGAKYTRLNKPVEMRIVSDGLSKS EALKREIGIKKLTAEQKRGLWAEAETLAKD >gi|241320548|gb|ACQV01000014.1| GENE 5 2781 - 3671 893 296 aa, chain - ## HITS:1 COG:PA0123 KEGG:ns NR:ns ## COG: PA0123 COG0583 # Protein_GI_number: 15595321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 295 1 298 302 173 37.0 3e-43 MQDIKPLLVFAAVLEHGSMNAAAAALGMTPSAVSQHINRLEALHGIKLLNRSTRSLAPTD AGRALGEYCRRLAATLADTRTVIDNLKTEPVGELRISLTSTVIESRAFQTAFTRLQTEFP KIRPVLNFSDTLDDLQHNQTDIAIRGGDRALDDPNLVARHLVTWPYIICAAPDYLDRHPT ITHPSQLHAHHWLHFLSVRTTLQNGEESYFLDVADSIACTHLAAVRSLTESGFGLSLQVG GEVREKIAQGRLKVVLPEWTLPPISLYLVTPYRVQSAKTEAAVRIFTESFAKEGDL >gi|241320548|gb|ACQV01000014.1| GENE 6 3792 - 4448 1059 218 aa, chain + ## HITS:1 COG:PA0741 KEGG:ns NR:ns ## COG: PA0741 COG2910 # Protein_GI_number: 15595938 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Pseudomonas aeruginosa # 1 216 1 212 213 152 41.0 3e-37 MKIAVIGSTGYVGNAVVQELAGRGHEVTAFARNTDKVFQAQNVAAVSADVNAADFADKLA GFDAVVSAFNPGWNNPNIGADFTHGANNIVEAAKAAQVPYLLIVGGAGSLYVAPGLQLID TPDFPKEIFDGANAARHLLAELLPRRDVNWSFVSPPARLGVTGGFSEDKTGKYRLGKDDL LMDGEIPAGISVADLAVAIADDAENKAHLFERFTVAAV >gi|241320548|gb|ACQV01000014.1| GENE 7 4686 - 5141 149 151 aa, chain - ## HITS:1 COG:no KEGG:Psyc_0188 NR:ns ## KEGG: Psyc_0188 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 1 134 1 152 157 131 49.0 8e-30 MASYIESSLGRGERIVYKAQVSWFSQFWRIFFGILLLMWVIGIVFIVFAILNVMTTELAL TNKRVIAKFGFIRRQTIEININRIESISVNQGFWGRIFNYGSIVVRGTGGSHAPIPYIAR PMEFRQQFNDFIDNEIGEDSKNQIELKPPAV >gi|241320548|gb|ACQV01000014.1| GENE 8 5244 - 5474 243 76 aa, chain + ## HITS:1 COG:no KEGG:Swoo_4018 NR:ns ## KEGG: Swoo_4018 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: S.woodyi # Pathway: not_defined # 1 68 1 68 68 80 58.0 2e-14 MSKISVLIGIKIREIRKQSNINQESLALLADIDRSYMGRIERGEVNITIDKLYQLSSALN CSVHDLLPDDLEIKNT >gi|241320548|gb|ACQV01000014.1| GENE 9 5600 - 6502 1237 300 aa, chain + ## HITS:1 COG:NMB1987 KEGG:ns NR:ns ## COG: NMB1987 COG0486 # Protein_GI_number: 15677815 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis MC58 # 1 284 1 283 448 434 82.0 1e-121 MSATQPTIAAIATAPGRGGVGVIRLSGKNLLPLAQTLSGGKTPKPRTALYTDFLGGDGHP IDNGILLYFAAPASFTGEDVIELQGHGGPVVMDMLLSRCLELGARMAEPGEFTKRAFLNN KLDLAQAESVADLIDASSKSAARMALRSLKGAFSQHIHELVDDLITLRMLVEATLDFPEE DIDFLEAADARGKLQALQGRLKTVLASAEQGAILREGMNVVLVGAPNVGKSSLLNALAGD DIAIVTDIAGTTRDTVREQITLNGVPVHIIDTAGLRETDDVVEQSASSAAAKPSPKPMSP >gi|241320548|gb|ACQV01000014.1| GENE 10 6550 - 6963 558 137 aa, chain + ## HITS:1 COG:NMB1987 KEGG:ns NR:ns ## COG: NMB1987 COG0486 # Protein_GI_number: 15677815 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis MC58 # 1 137 317 448 448 176 69.0 9e-45 MNSLPEGLKKIEIHNKADLTGEPVAVRSDGLTQTGAESVISLSAKTGAGLDLLKHALLQE VGWQGESESLFLARSRHLNALHEAEAELENAALCDNNQIELFAEHLRLAQNACSEITGEF TADDLLGVIFSRFCIGK >gi|241320548|gb|ACQV01000014.1| GENE 11 7047 - 7154 107 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTLIKMAAASLIGMSGLTVGATNIAKNMAEAANK >gi|241320548|gb|ACQV01000014.1| GENE 12 7197 - 7301 160 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTLIKLAAASLIGMSGLTVGATNIAHNMADADK >gi|241320548|gb|ACQV01000014.1| GENE 13 7389 - 7496 163 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGHLITLAAASLIGMSGIPASALGVAYNMETVVHK >gi|241320548|gb|ACQV01000014.1| GENE 14 7513 - 7587 87 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIRPVGSADAGEKMCMLLNNILYL >gi|241320548|gb|ACQV01000014.1| GENE 15 7990 - 9792 2366 600 aa, chain + ## HITS:1 COG:NMA0386 KEGG:ns NR:ns ## COG: NMA0386 COG1322 # Protein_GI_number: 15793394 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 581 1 575 594 563 61.0 1e-160 MNNILILTGAAAFFIGALFAWLITRYQAQSRHFIVLQELAESRRLHEFAEQVQAQTAADL AQSRHTVQELQDELQETGNRFAAAEKQIAYLQDCEAEAEALKHECAKWQQSAQNLQINNE RLNTQLVQEQALSADKNTLLQQQETEKGRLKQDYDTLLEQNHALQVQNERLSTQLTQEKA NIDDKNSLLQQQEAEKGRLKQEYAALLEQNHALQVQNERLNTQSEKDRQAAEEKLSLLAD ARKNLSDQFQNLANTILEEKSRRFTEQNHDHLQQLLNPLNERIHGFSELVQQTYEKEAKE RLTIENELKRLQTLNTQLHHDAKALTTALTGTQNKTQGNWGEMILESVLENSGLQKGREY IVQASSVRHEADGTQRRLQPDVLINLPDNKQIVIDSKVSLTAYVRYTQSTGAEAERELAN HVASIRAHIKSLAAKDYTDLEGVKTLDFVFMFVPVEPAYLLALQHDPNLFQECFDKRIML TGPSTLLATLRTVANIWRNEQQNQNALAIAEAGSKLYDKFVGFVESMDGINKALGQAQSQ FQTAYGRLVSGRGNLISSTEKLRKLGIKAGKQLQRDLLEKAMSENEDHAALPTAQDQEND >gi|241320548|gb|ACQV01000014.1| GENE 16 9829 - 10062 156 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225077522|ref|ZP_03720721.1| ## NR: gi|225077522|ref|ZP_03720721.1| hypothetical protein NEIFLAOT_02585 [Neisseria flavescens NRL30031/H210] # 1 77 61 137 138 120 89.0 3e-26 MGQAAILAEVHLDFGVIQTAAAGYELLVGIVDPFLPEGIVHEVEIDICVVGTDGLHQGMN LLGIAGIGGKDDGDVAH >gi|241320548|gb|ACQV01000014.1| GENE 17 10136 - 10330 196 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759170|ref|ZP_04757278.1| ## NR: gi|241759170|ref|ZP_04757278.1| glycosyl transferase, family 8 [Neisseria flavescens SK114] # 1 64 1 64 64 126 100.0 4e-28 MVVTQSLHDLFNLDMRGYPVAAVQDSVLARIEWKHPIDLHTTPYFNSGMLLADLVQWREH NIAE >gi|241320548|gb|ACQV01000014.1| GENE 18 10421 - 10624 186 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225077521|ref|ZP_03720720.1| ## NR: gi|225077521|ref|ZP_03720720.1| hypothetical protein NEIFLAOT_02584 [Neisseria flavescens NRL30031/H210] # 1 67 48 114 114 132 94.0 6e-30 MNESWNFQTGAVEYFQKRNLGEVFPKPDTVPPVIHYTTRAKPWLCDYGEIPFIEIYWQYY CADWPKA >gi|241320548|gb|ACQV01000014.1| GENE 19 10816 - 11637 1254 273 aa, chain - ## HITS:1 COG:NMA2153 KEGG:ns NR:ns ## COG: NMA2153 COG2171 # Protein_GI_number: 15795024 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Neisseria meningitidis Z2491 # 1 273 1 273 273 519 97.0 1e-147 MSLQNIIETAFENRAEINPNTVTPEVREAVLETIRQLDSGKLRVAERLGVGEWKVNEWAK KAVLLSFRIQDNEILNDGVNKYFDKVPTKFADWSEDEFRSAGFRAVPGAVARRGSFVAKN VVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQASPTIIED NCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRTTGEIYQGRVPAGSVVVSGSMPS KDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI >gi|241320548|gb|ACQV01000014.1| GENE 20 11900 - 12646 464 248 aa, chain - ## HITS:1 COG:NMB0206 KEGG:ns NR:ns ## COG: NMB0206 COG2360 # Protein_GI_number: 15676133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Neisseria meningitidis MC58 # 1 231 1 231 241 374 75.0 1e-104 MKIPFLAPRDYRFPDPSYALDECDGLVGVSGDLDTGRLLSAYRQGIFPWFSRDGWFFWYA VAPRAVIVPENLRIGRSLAKTLRHKPYRVTVNRCFEKVIAHCANVPRPEQDGTWIEPAFQ TAYLKLHHQGHAHSFECWLPDEQGEMQLAGGFYGVQIGCVFYGESMFALRPDASKIAFAC AVPFLSDLGVALIDCQQDTEHMRRFGSQLMDFADFQTALKDLNAKPLKRNIECGVVAENL LKKIGGED >gi|241320548|gb|ACQV01000014.1| GENE 21 12724 - 13158 717 144 aa, chain - ## HITS:1 COG:NMA0064 KEGG:ns NR:ns ## COG: NMA0064 COG0735 # Protein_GI_number: 15793093 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 144 266 96.0 1e-71 MEKFSNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRILLEEGVEIGVATIYRV LTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEEN GYRIVDHALYMYGVCGECQTKTKR >gi|241320548|gb|ACQV01000014.1| GENE 22 13331 - 13768 620 145 aa, chain + ## HITS:1 COG:NMB0204 KEGG:ns NR:ns ## COG: NMB0204 COG2913 # Protein_GI_number: 15676131 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Neisseria meningitidis MC58 # 32 135 18 121 125 167 76.0 8e-42 MINIFPEMTQKGKPVNKALCLAIAAILGLASCSAERVSNFPSYKLKIIQGNELNPRAVVS LRQGMTRDQVQLLLGTPLLRDAFHADRWDYTFNTSRNGIIKEQSNLTLYFENDVLERAEG DAIQKSIEAVQAGQNVVPTTATNAK >gi|241320548|gb|ACQV01000014.1| GENE 23 13778 - 14587 1359 269 aa, chain + ## HITS:1 COG:NMB0203 KEGG:ns NR:ns ## COG: NMB0203 COG0289 # Protein_GI_number: 15676130 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Neisseria meningitidis MC58 # 1 269 1 269 269 467 92.0 1e-132 MSALKIAIAGVNGRMGRVLVEAVNNHPDAVLSGALEHSGSEVLGLDAGFASGLKTGVAIS DDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKGVNIIIGTTGFDDAGKAAIQAAGEKIGV VFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHKVDAPSGTALRMGEVIADALG RDLKECAVYGREGHTGPRDPSTIGFATVRAGDIVGDHTALFATDGERVEITHKASSRMTF AAGAVRAAVWANGKKGLYDMQDVLGLKNR >gi|241320548|gb|ACQV01000014.1| GENE 24 14677 - 15564 1521 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase [Neisseria flavescens SK114] # 1 295 1 295 295 590 100 1e-168 MSYQQITINVNDAVAERLADALMEHGALSAAIEDAYAGTENEQAIFGEPGMPTEQIWQQS KVIALFGESDDAASIIEAAAQECGLNDLKYTGEILEDQDWVRLTQAQFDPIQISDRLWIT PSWHEAPNGNAVNLQLDPGLAFGTGSHPTTRLCLKWLDTQLKGGESVLDYGCGSGILAIA ALKLGAGSAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLPQGQFDVVVANILANPLRM LGEMLAARTKQGGRIVLSGLLDEQVEELSGIYSQWFDIEPAEIEEGWARLSGVKR >gi|241320548|gb|ACQV01000014.1| GENE 25 15759 - 18149 3660 796 aa, chain + ## HITS:1 COG:NMB0212 KEGG:ns NR:ns ## COG: NMB0212 COG0187 # Protein_GI_number: 15676138 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 796 1 796 796 1486 95.0 0 MTDQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGHC DKITVTIHADNSVSVADNGRGMPTGIHPKEGRSAAEVIMTVLHAGGKFDNNSYKISGGLH GVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLRVVGDSDKKGTTVRFLASVETF GNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHESFALSGGVAGFVQYMNRKKTPLH EKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINSYI EANEVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSSEIGPVVNEVINQAL TDFLEENPTEAKIITSKIVDAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPAL SELYLVEGDSAGGSAMQGRDRKFQAILPLKGKILNVEKARFEKMLASQEVATLITALGTG IGKEEFNTEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKA KYGKQERYLKDELEKDQWLLGLALEKAKIVSDGRTIEGEELANTAKQFLLAKTVIEQESR IIDELVLHAMLHASPVDLSTAESANRAVAELSGLLDEKEVALERIEGHEGHQFIKITRKL HGNVMVSYLEPKFLNSKAYQTLTQTAAALKGMVGKGAKLYKGDNEYDIDSFEGALDILMS VAQKGMSIQRYKGLGEMNPEQLWETTMDPTVRRLLKVRIEDAIAADEVFVTLMGDEVEPR RAFIENNALLAQNIDA >gi|241320548|gb|ACQV01000014.1| GENE 26 18358 - 19386 1324 342 aa, chain - ## HITS:1 COG:NMA0599 KEGG:ns NR:ns ## COG: NMA0599 COG0809 # Protein_GI_number: 15793589 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Neisseria meningitidis Z2491 # 1 342 1 342 346 587 86.0 1e-167 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLPIEDKHFGDLPDYVAPGDVLVFNNT KVMKARLFGQKASGGKIEALIERVLDTHTALAHIRSSKSPKPGTELIFEGDIRAVMMERA EELFCLKFEGEQTVYELLEQNGHLPLPPYIERAADDEDDSRYQTVYAKYQGAVAAPTAGL HFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKMHSEWFDVPAETVAAVEAA KARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPGYRFNVADRLITNFHLPKS TLLMLVSAFSGMEHIRSVYRYAVEQEYRFFSYGDAMILGKAE >gi|241320548|gb|ACQV01000014.1| GENE 27 19742 - 20200 825 152 aa, chain + ## HITS:1 COG:NMA0597 KEGG:ns NR:ns ## COG: NMA0597 COG0511 # Protein_GI_number: 15793587 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 151 1 150 151 181 87.0 5e-46 MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTTAAAAPVYAAPAPAAAAPVAVPAAA PAAAAPAAAPAARDLSNAQKSPMVGTFYRAPGPNAAAFVEVGQQVKVGDTLCIIEAMKLM NEIEAEKSGVVKEILVENGTPVEYGEPLFIIE >gi|241320548|gb|ACQV01000014.1| GENE 28 20272 - 20463 371 63 aa, chain + ## HITS:1 COG:no KEGG:bglu_2g14300 NR:ns ## KEGG: bglu_2g14300 # Name: not_defined # Def: hypothetical protein # Organism: B.glumae # Pathway: not_defined # 1 63 1 63 64 97 85.0 1e-19 MRLILAIFLPWLQFFTIGRPIAGIICLILQCTLVGWIPAAMWSVYALSQYKTDQKIRNAL GGR >gi|241320548|gb|ACQV01000014.1| GENE 29 20493 - 21854 2072 453 aa, chain + ## HITS:1 COG:NMA0596 KEGG:ns NR:ns ## COG: NMA0596 COG0439 # Protein_GI_number: 15793586 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Neisseria meningitidis Z2491 # 1 453 1 453 453 858 94.0 0 MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKLADESVCIGPAASAQSY LNIPAIIAAAEVTEADGIHPGYGFLAENANFAEQVEQSGFVFIGPKADTIRLMGDKVSAK HAMIEAGVPCVPGSEGALPDDGEEILKIADKVGYPVIIKASGGGGGRGMRVVEKKEDLLQ SVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADEYGNAIYLAERDCSMQRRHQKVI EEAPAPFITEEERAKIGKACADACKRIGYRGAGTFEFLYEDGEFFFIEMNTRVQVEHPVT ELITGVDIVQEQLRIASGLPLQYKQEDIQVEGHAFECRINAEDPYNFIPSPGLIESCHLP GGFGIRVDSHIYQGYRIPPYYDSLIGKICVIGKDRDQAMAKMRVALAELAITGIKTNTPL HRDLFSDPGFQKGGVSIHYLEHWLEERKAKLDK >gi|241320548|gb|ACQV01000014.1| GENE 30 22152 - 23666 2287 504 aa, chain + ## HITS:1 COG:NMA0050 KEGG:ns NR:ns ## COG: NMA0050 COG0753 # Protein_GI_number: 15793081 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Neisseria meningitidis Z2491 # 1 504 1 504 504 1007 96.0 0 MSISKCPITHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEKLADFVREVIPERRMHA KGSGAFGTFTVTHDITKYTRAKIFSEVGKQTEMFARFTTVAGERGAADAERDIRGFALKF YTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRSATNNWDFWTLLPEALHQV TIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKFHFHTQQGIKNLTNEEAAKIIGD DRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEF ELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNLHQIPVN RPRCPVHSNQRDGQGRADGNYGSLPHYEPNSFGQWQQQPDFAEPPLKINGDAAYWDYRQD DDDYFSQPRALFNLMSEAQKQALFDNTAAAMGDAPDFIKYRHIRNCYRCDPAYGEGVAKA LGLTVEDAQAARANDPALGQPGLL >gi|241320548|gb|ACQV01000014.1| GENE 31 23969 - 25603 2079 544 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 544 1 547 547 805 75 0.0 MAAKDVQFGNEVRQKMVNGVNVLANAVRVTLGPKGRNVVLDRAFGGPHITKDGVSVAKEI ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGI DKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDG KSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNPFVLLFDKKISNIRDLLPILEQV AKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLQDIAILTGGTV IAEEVGLSLEKATLEDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSEY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALL RARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGNYGYNA GSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAMPDMGGMGGM GGMM >gi|241320548|gb|ACQV01000014.1| GENE 32 25702 - 25989 468 95 aa, chain - ## HITS:1 COG:NMB1973 KEGG:ns NR:ns ## COG: NMB1973 COG0234 # Protein_GI_number: 15677803 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Neisseria meningitidis MC58 # 1 95 1 95 96 155 97.0 2e-38 MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGKIGKDGERRPLDVK VGDKVIFGKYSGQTVKADGEELLVMREEDIFGIVE >gi|241320548|gb|ACQV01000014.1| GENE 33 26406 - 28478 2846 690 aa, chain + ## HITS:1 COG:NMA0453 KEGG:ns NR:ns ## COG: NMA0453 COG1629 # Protein_GI_number: 15793456 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 690 1 714 714 1026 77.0 0 MNTPLFRLSLLSLTLAAGFAHAENEAKDNVVLDTVTVKGDRQGSKIKTNIVTLQQKDEST ATDLRGLLKEEPAIDFGGGNGTSQFLTLRGMGQNSVDIKVDNAYSDSQILYHQGRFIIDP ALVKIVSVQKGAGSASAGIGATNGAIITKTVDAEDLLKGLDKNWGVRLNSGYASNDGVSY GASVFGKAGNFDGLFSYSRNDEKNYEPGKGYTNSNSGKTVPFSALDKRSYLAKIGANFGD NRLVLSHMNDQHRGIRTIREEFTLTNDPRLTLANQAPSYRETTQSNTNLEYTGKNLGFVE KLNANAYVLENERYSADDSGSNYAGKVPGPTTTKITTKGANINFDSRLAEKTLLKYGVNY RHQEIKPHAFLNSQYTNTDAALQSLVRGYSLTNPTKTDYGVYVEAIQDIGDVTLTGGLRY DHFEVKTHDGKSVSNGKVNPSLGVIYQPIENLSFSASHNYASRSPRLYDALLTHGRRGIV SIADGTVAERARNTEIGFNYNDGTFAANGSYFWQKISDAIANPQDRHGAAFKETANAGYI KNHGYELGASYRTGGLLAKVGVSHSKPRIYDTHPKNLLSANPEFAVQTGRTWTTSLSYRF QNPNLEIGWRGRYLQKASGSVLVRDKGEVKRKGYGVNDVFANWKPLGKDTLNVNFAVNNV FNKFYYPHSQRGETLPGIGRDVRLGVNYRF >gi|241320548|gb|ACQV01000014.1| GENE 34 28594 - 29556 1278 320 aa, chain + ## HITS:1 COG:NMB1989 KEGG:ns NR:ns ## COG: NMB1989 COG4607 # Protein_GI_number: 15677817 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 320 1 321 321 545 93.0 1e-155 MLRLTALAVCCALALGACSPKDSASNQAQTASASAAQTEGASLTVKTARGDAKVPQNPER IAVYDLGMLDTLNKLGVKTGLSVDKNRLPYLDEYFKTTKPAGTLFEPDYEALNAYKPQLI IIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDALAQIFGKQAEADKLKAEIDAS FDAAKTAAQGKGKGLVVLVNGGKMSAFGPSSRLGGWLHKDIGVPAVDESIKEGSHGQPIS FEYLKEKNPDWLFVLDRGAAIGEEGQAAKDVLDNPLVAETTAWKKGQVVYLVPETYLAAG GAQELLNASKQVSDAFNAAK >gi|241320548|gb|ACQV01000014.1| GENE 35 29786 - 30754 1183 322 aa, chain + ## HITS:1 COG:NMA0451 KEGG:ns NR:ns ## COG: NMA0451 COG4606 # Protein_GI_number: 15793454 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis Z2491 # 23 322 23 322 322 426 94.0 1e-119 MFHKPSFLNAVNGVALLILFAVSLSVGVAEFKWSALFSLSDSQQVMFISRLPRTFAIVLT GASMAVAGMIMQILMRNRFVEPSMVGASQSAALGLLLMTLLLPAAPLLAKMSVAAVAALI GMLVFMLLIRRLPPTAQLMVPLVGIIFGGVIEAVATFIAYENEMLQMLGVWQQGDFSGVL LGRYELLWATGILALFAYLIADQLTILGLGETVSVNLGLNRTAILWSGLIIVALITSLVV VTVGNIPFIGLVVPNIISRLMGDKLRQSLPAVALLGASLVLLCDIVGRVIVFPFEIPVST VFGVMGTALFLWLLLRKPAHAV >gi|241320548|gb|ACQV01000014.1| GENE 36 30744 - 31715 1195 323 aa, chain + ## HITS:1 COG:NMB1991 KEGG:ns NR:ns ## COG: NMB1991 COG4605 # Protein_GI_number: 15677819 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 323 1 323 324 478 93.0 1e-135 MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVLHLRLTKLAALLMVAYA VGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTLGGVGYASLPLTGKFGFELVVM MGGSLLLFYTLIKQGGRDLSRMILIGVIFGILFRSLSSLLSRMIDPEEFTAAQANMFATF NTVHSELLGIGAVVLLISAAVIWRERHRLDVYLLGHNQAINLGVNYTRNTLWLLLWIAAL VATATAVVGPVSFFGLLVAALANYFSPSVKHSVRLPMTFCVGGILLVGGQTIFEHFLGMQ AVLSVVVEFAGGLVFLYLVLKKK >gi|241320548|gb|ACQV01000014.1| GENE 37 31804 - 32430 1123 208 aa, chain + ## HITS:1 COG:no KEGG:NMO_0174 NR:ns ## KEGG: NMO_0174 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 208 1 208 208 344 84.0 1e-93 MTPERLPSFFDDAPTITVQDALADFLGAAENGILTYRYADAVRLCGHSCPTVAGAYLMVI KGLKALYGAELPQRGDIEAFMQGERDEGTTGVTASVVQLLTGAAPETGFGGVGPAGRFAR RHLLSFGTGEINGTLALRRRDTGKTVAVSLNAALQPFAPQMRDIMPKAVSGSASTDELKQ FGELWQERVRAFLIDQADNPEFVTVSEI >gi|241320548|gb|ACQV01000014.1| GENE 38 32511 - 33269 234 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 224 1 227 245 94 28 9e-19 MITIRNVSHTIGSNPILNDVSLDIPEGGITALIGPNGAGKSTLLSFMARLQPLVHGDISY AGKDIKTTPTAELARTLSILTQENSIMSRITVRDLLMFGRYPYHQGRPSENDKTIVEEAL AEFHLQDFADRYLTELSGGQRQRAMIAMVFCQRTDYVLLDEPLNNLDMYHARSLMQILRR LTDEHKRTTVVVLHDINQAAAYADYVVAMKNGQVAMQGKPNDIFTAENIKTLFDMDVNVL DYEGKKLVIHHI >gi|241320548|gb|ACQV01000014.1| GENE 39 33338 - 34630 1458 430 aa, chain - ## HITS:1 COG:NMB1823 KEGG:ns NR:ns ## COG: NMB1823 COG3977 # Protein_GI_number: 15677659 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Neisseria meningitidis MC58 # 1 428 1 428 430 819 91.0 0 MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPAKIAEVNAVFADVFSKLAA EHAVENIGNYSNPQGDAALIAALTEFLNREYGWNLTTDNIALTNGSQNAFFYLFNLFGGK FNLSDGQTAEKAILLPLTPEYIGYADVHVEGQHFISVKPKIENVEHEGEAGFFKYRVDFD ALESLPELKEGKIGAICCSRPTNPTGNVLTDGEMARLDALAQEHGIPLIIDNAYGMPFPN IIYSNVTLNWHENIILCFSLSKIGLPGVRTGIIVAAPEVVKAVSSLNAIVNLSPTRFGAA IAAPLLNDGRLKQLADEVIQPFYRQQAQTAVSLLKRELGAYPLKIHKPEGAIFLWLWFEN LPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQDYPHAHECIRMSIAQDAETLEKGIAAIG RVVRGLYDKK >gi|241320548|gb|ACQV01000014.1| GENE 40 35090 - 35518 90 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298369236|ref|ZP_06980554.1| ## NR: gi|298369236|ref|ZP_06980554.1| hypothetical protein HMPREF9016_00906 [Neisseria sp. oral taxon 014 str. F0314] # 17 142 19 143 143 115 48.0 1e-24 MKKLLPLSLVLLSLFSAGCEANKHVKYSQTHSSVQKGKKDIPTQSPMLNEILSIKRTDIP RWEPFDVSYIVSKYLPIGSSREQVISSLNKMHQDYKEEGNFIYAGYFKQGLPLVPSPRIS IALQFNETAHLEKIDATLNYVE >gi|241320548|gb|ACQV01000014.1| GENE 41 35649 - 36068 413 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759166|ref|ZP_04757274.1| ## NR: gi|241759166|ref|ZP_04757274.1| putative lipoprotein [Neisseria flavescens SK114] # 1 139 1 139 139 236 100.0 3e-61 MKKLAILLSLSLLLAACDLGFPKMTVNYDNLPHGKIKEYITKTFPNEPEKEALSKMIYAQ LSGDKSADNIRKTVSQMGMTCEVEKEICEYSGYIKTKVAGISSGSGQAKRIYHIVIFPKK GMDSLKTEYQIVEDTEKVN >gi|241320548|gb|ACQV01000014.1| GENE 42 36477 - 36998 402 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759171|ref|ZP_04757279.1| ## NR: gi|241759171|ref|ZP_04757279.1| hypothetical protein NEIFL0001_2062 [Neisseria flavescens SK114] # 1 173 1 173 173 303 100.0 4e-81 MNNNELEQAHNLLLETAEVMTQFRQSTHQIVQNLEDKLDKSLYDQRKMITEMVRAEVTKE MSNSVAGYVRDMEKARNQMADQVREFNAYLNKVNEENQKISSRLVWIISLAMATLVIGGL ALSFFYTMLIDQKRQDADMVGRINRANIVRCGDELCAKTGKSVENGYRVIQHR >gi|241320548|gb|ACQV01000014.1| GENE 43 37066 - 37890 310 274 aa, chain - ## HITS:1 COG:no KEGG:MAE_16090 NR:ns ## KEGG: MAE_16090 # Name: not_defined # Def: hypothetical protein # Organism: M.aeruginosa # Pathway: not_defined # 25 192 6 168 616 63 30.0 6e-09 MDTNKTGNHKQENQRDQVREQVINDYIENLRKYNGYTEKGKDNTIFGAHYGMQGQYWCDM YVDYVMEESFGKQNAKKMLGGFSAGTELSKANYQKIGNWHDAKDYIPQKGDQIFFLNSTK DKKRTVNHTGVVIDVDLEKGIVYTIEGNTSAKPGDSNGTTVREKQYPLDKNTIKGYGTPD WNIEVDKRIQEIEINKSSTVNELSSKDKLQNLINGFKHDKDGTFTAKALAENADVVANFR DELRENLKQNQVQEVAQNTPQVQEERSYGGRSFG >gi|241320548|gb|ACQV01000014.1| GENE 44 37929 - 38384 252 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759151|ref|ZP_04757259.1| ## NR: gi|241759151|ref|ZP_04757259.1| conserved hypothetical protein [Neisseria flavescens SK114] # 22 151 1 130 130 271 100.0 1e-71 MQKLFILISLTLSVSACAVSPMEETEDVINSGLYNIDFRAGNGKIYCGGDAKVSDLAQGV SCLTEIKGKPVLPRPNDCELEWGGTFFLGKTGKADMVCHSDFPFNPKARILKNGETVKGN GWQCTASGSEVTCINQDKHGFKISQEVQKLF >gi|241320548|gb|ACQV01000014.1| GENE 45 38426 - 38935 177 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759150|ref|ZP_04757258.1| ## NR: gi|241759150|ref|ZP_04757258.1| hypothetical protein NEIFL0001_2065 [Neisseria flavescens SK114] # 1 169 64 232 232 291 100.0 9e-78 MQAKVFIADIGNQYGAKVNEALVKFIAQTEKDNGVTLPGNRTVKVHGQLDMEDLKNFRMS TVYGIKHPADAKRRDENIERITAPTRQQEHSKSSEGNDRPADKLQALIQGFKNDKDGTFT AKALADNADVVANFRDELRETLKQNQAQEVAQNTPQVQEERSYGGRSFS >gi|241320548|gb|ACQV01000014.1| GENE 46 39506 - 39907 353 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759187|ref|ZP_04757295.1| ## NR: gi|241759187|ref|ZP_04757295.1| putative lipoprotein [Neisseria flavescens SK114] # 1 133 1 133 133 254 100.0 8e-67 MKKALFLSVCLLGAGSCFAQENIEHKKEVCPKSALENIENVSYDCLDVWDSRLEKKIDEK YKMIYRRVKQKDMALHALPSSYFIKVRKTWNAYREQLCSDPTNNTDLKSASDWYILQCRI EQSQAHLKALERF >gi|241320548|gb|ACQV01000014.1| GENE 47 39984 - 40349 209 121 aa, chain - ## HITS:1 COG:no KEGG:XCV1304 NR:ns ## KEGG: XCV1304 # Name: not_defined # Def: putative secreted protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 3 117 75 190 195 84 33.0 8e-16 MDYQAIITNKKTKKIQIIESMSHPPLTADNLVQIQDLNNDGYPDIILKGFPVAASAINGN ELYMFNPETKQFEETKDITQLGEIHASGKNCIYVDYRKNSMEYSQDHYCWRNGKWHFIEN R >gi|241320548|gb|ACQV01000014.1| GENE 48 41432 - 41731 539 99 aa, chain - ## HITS:1 COG:NMA0398 KEGG:ns NR:ns ## COG: NMA0398 COG3203 # Protein_GI_number: 15793406 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis Z2491 # 4 98 3 99 329 60 39.0 9e-10 MNLKLLLTAALSPAALAAHADVQLYGSIKSGIETSQTRFGGQTYSRTAVADQGSHIGLRG SHPIGGGTNFIWEVEQDTPVSKSGSIRQDWRERRDNFGR >gi|241320548|gb|ACQV01000014.1| GENE 49 41829 - 42656 833 275 aa, chain + ## HITS:1 COG:NMB0441 KEGG:ns NR:ns ## COG: NMB0441 COG0388 # Protein_GI_number: 15676353 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Neisseria meningitidis MC58 # 1 275 1 267 270 440 77.0 1e-123 MRSLRAAAVQMVSSTDPETNIATMKRLVREAAEQGADWVLLPEYWPLMGKNDTDKLAFAE PLDDGRVGKTCHTRFQTALSKTARKCSVVLFGGTVPLQSKNAGKVMNTMLVYDRDGNRVG LYHKMHLFGFSGLGERYAEADTILAGNDVPKLSVDDVPLAAGVCYDLRFPEFFRAQQPFD VLLLPAAFTYTTGKAHWELLLRARAVENQCYVIASAQGGPHESGRRTFGHSMIIDPWGDV LATLPEGEGVICADLDTARLQSVRTRLPALKHRLL >gi|241320548|gb|ACQV01000014.1| GENE 50 42666 - 43211 748 181 aa, chain + ## HITS:1 COG:NMA1631 KEGG:ns NR:ns ## COG: NMA1631 COG0817 # Protein_GI_number: 15794525 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Neisseria meningitidis Z2491 # 1 180 1 180 180 271 81.0 5e-73 MSQFQPTRILGIDPGSRVTGFGVIDVHGREHHYVASGCIKTPTGASLSERIAVIVRHIDE IIRHYQPHQAAIEQVFVNVNPAATLMLGQARGAAIAALVMHDLPVFEYTALQVKQAVVGK GKAAKEQVQHMVVQMLALSGTPQADAADGLAVALTHALRNHGLASQLNPDGLQVKRGRFQ W >gi|241320548|gb|ACQV01000014.1| GENE 51 43305 - 44174 1114 289 aa, chain + ## HITS:1 COG:NMA1630 KEGG:ns NR:ns ## COG: NMA1630 COG1560 # Protein_GI_number: 15794524 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 289 1 289 289 466 76.0 1e-131 MKAAFLFLYLIRLLPFCVLHKIADAIGILAYYAVKPRRKVGEVNLKKCFPELNDGQRTAL LKRHFQHMAKLMLEYGLYWYAPADKLRSLVRYQDKHHLDEALAAGEKVIILYPHFTAFEM AVYTLNQDVPLTSMYSYQKNKALDEQILKGRHRYNNVFLIGRTEGLRAIIKHLRKSDAPF LYLPDQDFGRNDSIFVNFFGIQTATITGLSRIAGMTKAKIIPAIPTREADNTVTLRFYPA WDNFPTENVEADTQRMNDFIEERVREHPEQYFWLHKRFKTRPEGESSFY >gi|241320548|gb|ACQV01000014.1| GENE 52 44873 - 45667 1155 264 aa, chain + ## HITS:1 COG:NMB1417 KEGG:ns NR:ns ## COG: NMB1417 COG3298 # Protein_GI_number: 15677276 # Func_class: L Replication, recombination and repair # Function: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB # Organism: Neisseria meningitidis MC58 # 1 263 1 263 264 473 82.0 1e-133 MTPILAFDIETIPDVNGIRQLYDLPADLPDNEVVLFAQQQRRAKTGSDFMQHHLHQVVAI SCCMRWGQDKIRVSTIGDPEDSEEVMIAKFFEVIENYTPQLVSWNGGGFDLPVLHYRALI HGISAARYWDMGDGDFGDSRDFKWNNYISRYHTRHCDLMDLLALYQPRASVPLDDMAKLC GFPGKLGMDGSKVWDAYHAGRLKDIRDYCETDAANTYLMYQRFRMMSGALDADEYEVEIK RIKHYLVAQAEEKQHWAEFVAAWH >gi|241320548|gb|ACQV01000014.1| GENE 53 45751 - 46560 425 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 8 266 30 289 294 168 40 6e-41 MFDEWLGLSKLPKNEARMLLKYASGYTRVQLLTRGGEEIPDEVRQRADRLAQRRLKGEPM AYLLGEREFYGRRFAVNPHVLIPRPETEHLVEAVLKRLPPQGRVWDLGTGSGAIAVTVAL ERVDADVRASDISTGALDTARQNAAELGAKVEFAQGSWFDTDRPSEGRYDVIVSNPPYIE NGDEHLSQGDLRFEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRN IMLKNGFAEVATEQDLAGLDRVTLGRLPA >gi|241320548|gb|ACQV01000014.1| GENE 54 46979 - 47833 1536 284 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 13 284 10 275 279 290 54.0 2e-78 MQLNAKFKALLASAAIAVGLTACGGSSGDAQSSQSSGAATVASIKEKGVIRIGVFGDKPP FGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTK TPERAEAVDFADPYMKVALGVVSPKGKPITDVAQLKDQTLLVNKGTTADAFFTKSHPEVK LLKFDQNTETFDALKDGRGAALAHDNALLWAWAKENPDFEVAIGNLGPAEFIAPAVQKGN ADLLNWVNSEIAAMKKDGRLKAAYEKTLLPVYGEKVKPEALLAE >gi|241320548|gb|ACQV01000014.1| GENE 55 47909 - 48640 310 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 4 217 9 219 309 124 34 1e-27 MALLSIRKLHKQYGSVTAIQSLDLDLEKGEVIVLLGPSGCGKSTLLRCVNGLEPHQGGSI VMDGVGEFGKDVSWQTARQKVGMVFQSYELFAHMTVIENILLGPVKVQNRNRAEAEVQAD KLLERVGLLDRKNAYPRELSGGQKQRIAIVRALCLNPEVILLDEITAALDPEMVREVLEV VLELAHEGMSMLIVTHEMGFARKVADRIVFMDKGGIVESSDPETFFSAPKSERARQFLAG MDY >gi|241320548|gb|ACQV01000014.1| GENE 56 48642 - 49310 496 222 aa, chain - ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 6 222 9 225 225 216 53.0 3e-56 MAFDWLFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRLIGRFYLE TIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFTLWGIAEMGDLVRGALESIEKHQV ESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQII ENSLLTQPNASFWVYGLIFMLYFLCCWPLSLLATKLEQKWEH >gi|241320548|gb|ACQV01000014.1| GENE 57 49300 - 49959 746 219 aa, chain - ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 21 218 1 198 206 189 54.0 4e-48 MNWPYLIDAIPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELS RNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMAEAVRAGILAVPKGQVEAG KAVGLSRFQVFRYVELPQAWAVAFPAVAANVLFLMKETSVVSAVGIAELLFVTKDVIGMD YKTNEALFLLFAAYLIILLPVSLLVRRLENRIRRAKYGV Prediction of potential genes in microbial genomes Time: Thu May 26 11:31:11 2011 Seq name: gi|241320510|gb|ACQV01000015.1| Neisseria flavescens SK114 ctg1118407793857, whole genome shotgun sequence Length of sequence - 24377 bp Number of predicted genes - 21, with homology - 20 Number of transcription units - 12, operones - 6 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 387 262 ## PROTEIN SUPPORTED gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase - Prom 511 - 570 4.1 + Prom 496 - 555 4.4 2 2 Tu 1 . + CDS 584 - 1666 1121 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 1725 - 1764 4.1 3 3 Tu 1 . - CDS 1673 - 2653 652 ## COG4255 Uncharacterized protein conserved in bacteria - Prom 2673 - 2732 3.1 + Prom 2729 - 2788 5.2 4 4 Op 1 . + CDS 3018 - 4742 570 ## COG0739 Membrane proteins related to metalloendopeptidases 5 4 Op 2 . + CDS 4412 - 5632 1720 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 5640 - 5677 9.1 - Term 5627 - 5664 9.1 6 5 Op 1 3/0.000 - CDS 5672 - 6373 1086 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 7 5 Op 2 . - CDS 6376 - 7185 1014 ## COG0169 Shikimate 5-dehydrogenase - Prom 7307 - 7366 14.9 + Prom 7285 - 7344 16.5 8 6 Op 1 . + CDS 7406 - 7786 276 ## gi|241759194|ref|ZP_04757301.1| conserved hypothetical protein + Term 7806 - 7852 14.4 + Prom 7882 - 7941 5.4 9 6 Op 2 . + CDS 8025 - 9443 2026 ## COG0174 Glutamine synthetase + Term 9477 - 9522 10.5 + Prom 9562 - 9621 6.1 10 7 Op 1 . + CDS 9653 - 10897 911 ## gi|241759213|ref|ZP_04757320.1| putative lipoprotein + Term 10906 - 10952 5.7 11 7 Op 2 . + CDS 10960 - 11610 931 ## COG1994 Zn-dependent proteases + Term 11627 - 11667 7.5 + Prom 11660 - 11719 5.7 12 8 Op 1 . + CDS 11742 - 12746 757 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 13 8 Op 2 . + CDS 12785 - 13156 210 ## gi|241759203|ref|ZP_04757310.1| hypothetical protein NEIFL0001_0241 + Prom 13274 - 13333 5.5 14 9 Op 1 . + CDS 13408 - 13647 321 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator 15 9 Op 2 . + CDS 13691 - 14425 930 ## COG0518 GMP synthase - Glutamine amidotransferase domain 16 9 Op 3 . + CDS 14500 - 15375 785 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 17 9 Op 4 . + CDS 15442 - 16260 855 ## gi|241759191|ref|ZP_04757298.1| hypothetical protein NEIFL0001_0246 18 9 Op 5 2/0.250 + CDS 16312 - 17538 1067 ## COG0038 Chloride channel protein EriC + Term 17551 - 17591 12.2 + Prom 17545 - 17604 2.8 19 10 Tu 1 . + CDS 17702 - 19282 2276 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 19302 - 19364 1.7 + Prom 19333 - 19392 2.2 20 11 Tu 1 . + CDS 19483 - 19611 223 ## + Term 19671 - 19701 1.2 21 12 Tu 1 . + CDS 20368 - 24376 13844 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|241320510|gb|ACQV01000015.1| GENE 1 1 - 387 262 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP9-BS68] # 57 124 7 74 114 105 69 3e-22 MSRNNEELQGISLLGNQKTQYPSEYAPEILEAFDNKHPDNDYFVKFVCPEFTSLCPMTGQ PDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNIIMKDLIALMDPKYIEVFG EFKPFRFQP >gi|241320510|gb|ACQV01000015.1| GENE 2 584 - 1666 1121 360 aa, chain + ## HITS:1 COG:YPO0416 KEGG:ns NR:ns ## COG: YPO0416 COG0859 # Protein_GI_number: 16120749 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 11 351 1 337 346 235 40.0 9e-62 MSLAQPKRILIIKLRHHSDVLLSTPVVDALKTRFPDCEIDMLVYAGTGQLIADNPQIAQI FTIDRNWKKLGVFKQLACEKNLLSKLKARDYDWAFNLSDQWRAAIIAKLCARCSVGLDCI KRDGFWWRFCHDFINHELDTSHHIVENQLNILAPLIQPEDVADAKVRLWVAQDARESMRQ KLREQGWNGEDYVLLHPGARWHFKCWEDGKNAAIVQLLLNSGQNVVLTASHNTVEQYMLQ EIIGRLNIPEGRKVYVLSGCLSLRELAAAIEGAKLFVGVDSAPMHIAAALDKPQIALFGA SWVDKWRPYSEQAEVIYAGDYAELPHPDSIDTNDPTRLLKAIPLQDVWDKILAKLEALEA >gi|241320510|gb|ACQV01000015.1| GENE 3 1673 - 2653 652 326 aa, chain - ## HITS:1 COG:NMA2173 KEGG:ns NR:ns ## COG: NMA2173 COG4255 # Protein_GI_number: 15795044 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 326 1 322 322 289 44.0 6e-78 MKLTLALPSLNRFADESVPALALPAFNRLLRYGILRKETLRPSQFYGRHLWSGSLITQVQ RLRHTSPNRTAAFASPVWQQMGMHHVNIISGEFIGIQKEEAQRLCADLSAFYQDKDWQFE PLCESMWLLSMPKIEDWGAECVLDVCGQLEMDGQAHGKDAVSWLAMQTEIQMFLHTHPIN QAREQQGLPEINGLWLWNDADGTQSADIVASDSAWARFSDKPKLDAPYDLKAWFEMVQET GNAVSDGLIFLDDLVSTLQTGDVWAYKDILESWENRWFAPLWDALASGRLKTVCIATDGE NGGTLEIGRRSKWAFWRKAKTFNGSW >gi|241320510|gb|ACQV01000015.1| GENE 4 3018 - 4742 570 574 aa, chain + ## HITS:1 COG:NMB0315 KEGG:ns NR:ns ## COG: NMB0315 COG0739 # Protein_GI_number: 15676232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 43 345 42 344 430 379 58.0 1e-104 MIKNKYSTRFKATLLAFLLPASGIMTAYAITDPQPAHTDFKVERISEELPAVYVETNTYQ SSYWVQEVVQAGDSLADVLTRMGVNQEDIKQIMAKNNANLDMKNLRTNQSVNIRIDSSGQ VTDVQFFTDEELERNLVALEKVKGKWRISNAEIDMKTMPTLRSVKIRTSAIGDMLRAEIP SEVYIQLKEIFADSFNMSDLGEGDTVRLLYNSMYFRGQQMAVGDILAAEVVKDGKTYQAY YYSQGKGDEESGSYYDQNGKSLQQKAGFNTEPVAYTRISSPFGYRVHPVLHTVRMHTGID YAAPTGTPIKAAADGEVIFKGWKGGYGNTVMIRHANGVETLYGHMRRVQPCRRQSPCRRS DWFCRYNRPFDRSAPALRSTRQRSAGQPDYRRLADAEIDPNQYGRIPQTAKRCQHDVVCH PFFAGFRSAVGLNKDKGRLNKVSFRRPFLLKSIPSSSPRLLRENLCPLISPLSNPCLIPT CTNSPCCKSCCTNFRKPTASTNSVAATKRWCIRWPIFKKILNANSIPCASCALHMTNLPI CAACVLSKATLSIISNFSNSNAASSKSAQMTKAV >gi|241320510|gb|ACQV01000015.1| GENE 5 4412 - 5632 1720 406 aa, chain + ## HITS:1 COG:NMA1706 KEGG:ns NR:ns ## COG: NMA1706 COG1488 # Protein_GI_number: 15794599 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 7 403 21 417 419 759 92.0 0 MSAYQPIIQSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNKEMVYPLADIQEDFEREL DSLCQLRFTHDELAYLRSLRFIKSDFVDYLELFQLQRRFVQVSPDDQGRLNIRIEGPMIQ AMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAQQLKEIAATQNPNDPPFLISDFG TRRRYTLAWQEHVIRTLLEAAPDIVRGTSNVYLAKKIGITPIGTMAHEFLQAFQALDVRL RNFQKAALESWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYVWGDK AYEHYKKLKIDSRTKMLTFSDGLDIERSWALHQYFKDRFKTSFGIGTNLTNDLGHTPLNI VLKLVECNGQSVAKLSDSPGKTMTTNNTFLAYLRQVFDVPEPEEKA >gi|241320510|gb|ACQV01000015.1| GENE 6 5672 - 6373 1086 233 aa, chain - ## HITS:1 COG:NMA2130 KEGG:ns NR:ns ## COG: NMA2130 COG0744 # Protein_GI_number: 15795001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Neisseria meningitidis Z2491 # 1 233 1 233 233 404 85.0 1e-112 MFRIIKWLIALPIGIFIFFNAYVYGNIITYRAVAPSKTAFMSMRMSQFAKEGRDVELDYR WVPYDQISVNLKKALIASEDANFAEHSGFDWNGIKYAMKRNKQSGEVKAGGSTISQQLAK NLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSIEWHYGVFGAEAASQYFYKKP ASALTRQQAAKLTARVPAPLFYADHPKSKRMHNKTNIILRRMGSAELPESDMD >gi|241320510|gb|ACQV01000015.1| GENE 7 6376 - 7185 1014 269 aa, chain - ## HITS:1 COG:NMA2129 KEGG:ns NR:ns ## COG: NMA2129 COG0169 # Protein_GI_number: 15795000 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 269 3 271 271 434 81.0 1e-122 MTTLPRYAVFGNPVAHSKSPQIHQQFALQEGAAIEYGRICAEIGGFAEAIAAFRAEGGQG ANVTVPFKQEAFALADEHSDRALAAGAVNTLVWLEDGRIRGDNTDGIGLANDIMQVKNIA IEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTHAKAEELAQLFDIEAVPIEDLNGS FDIIINGTSGGLSGQLPAVSPEIFRNCRLAYDMVYGEAAQAFLNFAQSNGAAEVSDGLGM LVGQAAASYHIWRGFTPDIRPVIEYMKAL >gi|241320510|gb|ACQV01000015.1| GENE 8 7406 - 7786 276 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759194|ref|ZP_04757301.1| ## NR: gi|241759194|ref|ZP_04757301.1| conserved hypothetical protein [Neisseria flavescens SK114] # 21 126 1 106 106 211 99.0 9e-54 MLCLAVFALGLAPPAVAEDWVLLGINSNNTTIFGDADSRTDNSAWFETRYTKPKKMISNG KFYNTAKALEEMDCSGKRFRALTVTWYSESGNPIGSYTPSYAEWSYVIPGTGGESVYKFV CNHDPR >gi|241320510|gb|ACQV01000015.1| GENE 9 8025 - 9443 2026 472 aa, chain + ## HITS:1 COG:NMB0359 KEGG:ns NR:ns ## COG: NMB0359 COG0174 # Protein_GI_number: 15676274 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Neisseria meningitidis MC58 # 1 472 1 472 472 954 97.0 0 MSIKDAVKLIEESEARFVDLRFTDTKGKQHHFTIPARIVLDDPEEWFENGQAFDGSSIGG WKGIQASDMQLRPDASTAFVDPFYDDTTVVFTCDVIDPADGQGYDRDPRSIARRAEAYLK SSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESGAWSSGLHMDGQNTGHRPTVK GGYAPVAPIDCGQDLRSAMVNVLEELGIEVEVHHSEVGTGSQMEIGTRFATLVKRADQTQ DMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQSIWKDGQNLFSGDCYAGLSDTALY YIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPTKLAYSAKNRSASIRIPSVNSSKARRI EARFPDPTANPYLAFAALLMAGLDGIQNKIHPGDPADKNLYDLPPEEDALVPTVCASLEE ALAALKADHEFLLRGGVFSKDWIDSYIAFKEEDVRRIRMAPHPLEFEMYYSL >gi|241320510|gb|ACQV01000015.1| GENE 10 9653 - 10897 911 414 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759213|ref|ZP_04757320.1| ## NR: gi|241759213|ref|ZP_04757320.1| putative lipoprotein [Neisseria flavescens SK114] # 1 414 1 414 414 748 100.0 0 MNKIIGLAIAAVFGLSACSNLDHKTAHEVMSISNDRILKEDRSFNITGSSRIYISPLAEA VLADEKVEKKAEAKAKDAKAKEGEAASSMKVAQEDDAALKQEFSEREEAEFRNAMLDALP DGNIAQVAVDYLDKYPAISSYMEGVHLNYESAVDLSTRQFEMIPELVINNHNEKLSIKLP MKLDAEKWEIYVDLPASVSAIVNVYTDEKIGKRLIKEPLKVSLKEIGDSKHMPFDHIAEA GVRAFLSANKAMPADAYVFKEMDAFGKANHARYRVRHVMKPEYDSVVMKAMAKAFDEELS KLQKTPQPGSTEEDYKNAREFFSMSVNISDNQPLSFQRIFGNNLVVDYYLDRKGRMLASR MYMQINGTHKAINIIGDSVYSNYGKPVFKLNPQGKGITWKELKEFFSSNKKEDD >gi|241320510|gb|ACQV01000015.1| GENE 11 10960 - 11610 931 216 aa, chain + ## HITS:1 COG:NMB1731 KEGG:ns NR:ns ## COG: NMB1731 COG1994 # Protein_GI_number: 15677577 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Neisseria meningitidis MC58 # 1 212 1 212 212 280 70.0 1e-75 MFANFDLGVFLLAVLPVLLAVTVREVARGYTARYWGDHTGEQFGRLTLNPLPHIDPVGTI VVPLVCLMIGSFLFGWARPMPIDSRNFRDPRRAWRWVSISGPIANLILAFFWGFVVVLSA YVPESYQAPLVQMAGYGVMVNSIWVAFSLIPILPWDGGIFIDTFLNAKQSMQFRKIEPYG TWIILILLFTGLLAKLIWPIIAMIQAAVQMVVMLFI >gi|241320510|gb|ACQV01000015.1| GENE 12 11742 - 12746 757 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 1 323 28 350 353 296 48 1e-79 MHIGGYFIDNPIALAPMAGITDKPFRRICREFGAGWAVCEMLTSDPSLRHTKKTLRRSDF EGEGGVVVVQIAGSDPQQMAEAARYNVGLGAQVIDINMGCPAKKVCNVQAGSALMQNEPL VGEILEAVVNAVDVPVTLKTRLGWHDEHQNLPTIAKIAEESGIAALAIHGRTRTQMYKGE ARYELIAETKGRLNIPVWVNGDITSPQKAVAVLKQTAADGIMIGRGAQGRPWLFRDLKHY AEHGVLPPALSLAECNATILNHIRAMHEFYGEVAGVRIARKHIGWYIDEMPDGEQTRRDI NLLDSVAAQYDTLAAYLETLSEKTDRWVCHYREG >gi|241320510|gb|ACQV01000015.1| GENE 13 12785 - 13156 210 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759203|ref|ZP_04757310.1| ## NR: gi|241759203|ref|ZP_04757310.1| hypothetical protein NEIFL0001_0241 [Neisseria flavescens SK114] # 1 123 1 123 123 261 100.0 1e-68 MKLPLRFKRFGIAILVLTGFGIYAYDYNLIACKLMDRYWNEDKGRCMNPDCRQHDACMLS AGKDKATCETIHPGDSLDKAWYVLGKPWYEEDGRFFWSNKDGTHVAEIEPDGEKVGKITC FEE >gi|241320510|gb|ACQV01000015.1| GENE 14 13408 - 13647 321 79 aa, chain + ## HITS:1 COG:NMA1632 KEGG:ns NR:ns ## COG: NMA1632 COG2901 # Protein_GI_number: 15794526 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Neisseria meningitidis Z2491 # 1 79 1 79 79 129 82.0 2e-30 MNQTTTDIAQCIEQNLRQYFKDLDGTEPCGVYDMVLHQVEKPMLACVMEQCGGNQSKAAV ILGLNRNTLRKKLQQHGML >gi|241320510|gb|ACQV01000015.1| GENE 15 13691 - 14425 930 244 aa, chain + ## HITS:1 COG:STM2437 KEGG:ns NR:ns ## COG: STM2437 COG0518 # Protein_GI_number: 16765757 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Salmonella typhimurium LT2 # 7 241 1 233 239 230 47.0 2e-60 MQNPNKLNIHFILHEAFEVPGAYLKWAQWRGHNISATKVYEREALPDNVDNIDFLIVMGG PQSPDEDRQAFPYYDPQSELRLMCQAMAADKYIVGVCLGAQLLSVAYGARHTRSPEREIG IYPIELTAEGLADAHVSLLGKTLNTGHWHGDMPGLTNEAVVLATSKGCPRQIIRFAPKHY AFQAHLEFDREAVGLLIAADGRENVAEQSQAQTYVQHPDKIEAADFSEMNAKLFDFLDSL TQSK >gi|241320510|gb|ACQV01000015.1| GENE 16 14500 - 15375 785 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 286 1 288 290 306 51 7e-83 MLYQILALLIWGSSFIAAKYSYEMLDPTLMVEARLLIAALMVLPSCRRHLGRIPRSEWKP LLWISFVNYVVVLMLQFIGLKYTSAASAVTMVGLEPLLVVFVGHFFFNDKAKLYHWICCA VAFAGVGMMVMGGAEEGGTIDWFGCLLILLAGLGFAGVIRPSQQMIARIGVPAFTAASMA AAAVLCLPFSLVLADSYQINWSWGGTLSILYMGIGCSWLAYLLWNKGMNTVPANVSGLLI SLEPVIGVIMAVLILGEHLSAMSAMGITVVIVSTFVAGMLARVSNKHKKAV >gi|241320510|gb|ACQV01000015.1| GENE 17 15442 - 16260 855 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759191|ref|ZP_04757298.1| ## NR: gi|241759191|ref|ZP_04757298.1| hypothetical protein NEIFL0001_0246 [Neisseria flavescens SK114] # 1 272 1 272 272 552 100.0 1e-156 MKRIISLLLLACPILASAAPDNDKASVQAVIAKYYNRPLAAHKCQLAKPPKDSETASDNI MYCMKPVADHTVTRNGKATRYVLYTGFAYDMEKKVKQDAHASSGLAELFVLEKAGSKWAI KLHGRDEIGAWGDVPENKDWRFVQMGEQNWGYTVESGYTGQGETTTGENFLFTDNSNRVR KSLIINGNDNGAYFGDCDELKGREKRNCKDRYTSLEAKIAFDKSRPAVSGVWALAAKLSG VSGKKNYKNQKYIFPYNGKTHVAPQNYPLGGQ >gi|241320510|gb|ACQV01000015.1| GENE 18 16312 - 17538 1067 408 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 29 408 1 380 380 593 86.0 1e-169 MKETHKLWAALIITGIIGGMVGIVLTEIMHAIQHLAYGYGSDGLYISFREGVSQASPARR IGVMVFCGAVVGLGWWLLKRHGRPQPSIKAVVKNPLAGFPFFETVSHALLQIITVGLGSP LGREVAPREMTAAFASVGVNRFGLSEDDARLVIACASGAGLAAVYNVPLASTLFILEVML GLWTQQAVAAALLTSVIATAVARIGLGDVQQYHPTNLSINTSLLWFSAIIGPILGATAVF FQRTAQKFPLIKRDNVKIIPLAVCMFALIGVISIWFPEILGNGKAGNQLTFGGLTDWQHS LELTAVKWLVVLMALAVGAYGGLITPSMMLGSTIAFAAATAWNSVFPEMSSESAAIVGAA VFLGVSLKMPLTAIAFILELTYAPVALLMPLCTGMAGAVWVAKKMGFK >gi|241320510|gb|ACQV01000015.1| GENE 19 17702 - 19282 2276 526 aa, chain + ## HITS:1 COG:NMA1182 KEGG:ns NR:ns ## COG: NMA1182 COG0138 # Protein_GI_number: 15794127 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Neisseria meningitidis Z2491 # 1 526 1 530 530 1017 96.0 0 MSSIKRALISLSDKTGAVEFAQALTKLGVEILSTGGTAKLLADAGVPVIEVADYTGFPEM LDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCVNLYPFAATIAKPNCTLED AIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAEMEANNGALSDKTRFNLSRKAFS HTAQYDGMISNYLTSLSDDVLSGQPQIGEFPSQFNQSWIKVQDMRYGENPHQRAAFYRDI YPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSFDAPACVIVKHANPCGVAVAADTLT AYKLAYATDTTSAFGGIIAFNREVDGATVKQITDNQFMEVLMAPKFTAEALEIAAAKKNV RVLEVPLEAGANRFELKRVGGGLLVQTPDIHRLSRADLKVVSKRQPTEQEWNDLLFVWNV AKYVKSNAIVFGKGGQTYGIGAGQMSRVDSTRIAARKAQDAGLDLNGACAASDAFFPFRD GVDVIAEQGIKAIIHPAGSMRDQEVFDAADEHGIAMVVTGIRHFRH >gi|241320510|gb|ACQV01000015.1| GENE 20 19483 - 19611 223 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHILLILTLATLTACAFSHTGGYGYAGNNGASAGVTQTFRW >gi|241320510|gb|ACQV01000015.1| GENE 21 20368 - 24376 13844 1336 aa, chain + ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 366 1 384 1588 71 32.0 1e-11 MNKVFKVIWNHSTQTWTAVSEISHAHGKKSASDKRKAVAAVVAVAGALMASSAAQAGAEL GGGSATGTNAVAVGAASKATGTASFAGGTSANAAGESSVAVGGSMTAAEAAQAVGNNSIA VGFKSSASQTADIAVGYNAKANGTSTGSDGDGVVNNAGSAMAIGTDSQATGIVATAIGQR SQALANGAVALGGDAQAKQGSDVAIGRGSVADGISASAFGPAAQATGKYAVALGVQSQAT SEQAIALGRLSQANGKFATALGNGAQATAQNTLALGTEAKSTIENSVALGNGSTTSAFVP TNTATVGSYTYSGFAGATSGLGNGAVLSVGSAGNERQIQNVAAGRINATSTDAINGSQLF AVANRIENLNPFVFSGHNGSGSSPAAGTFTYNPNSAGNPLKLIAGEGLKMTSNGTNEYTL SVIGGGATGPKGEKGDTGPAGPKGEKGDTGAAGEKGEKGDTGATGAKGDTGATGATGATG ATGATGATGATGAKGDTGATGAATGATGATGATGATGATGATGATGAKGDTGATGATGAT GATGAKGDTGAKGDTGATGAKGDTGATGAKGDTGATGAKGDTGAKGDTGAKGDTGATGDK GEKGDTGVTGATGATGATGAKGDTGATGAKGDTGATGATGATGATGAKGDTGATGATGAK GDTGATGAKGDTGAKGDTGATGAKGDTGAKGDTGAKGDTGATGDKGEKGDTGVTGATGAT GATGAKGDTGATGAKGDTGATGATGATGATGATGATGAKGDTGATGATGATGATGATGAK GDTGATGATGATGATGATGAKGDTGATGAKGDTGAKGDTGAKGDTGATGATGATGATGAT GATGATGAKGDTGATGAKGDTGAKGDTGAKGDTGATGATGATGATGATGATGAKGDTGAT GATGAKGDTGATGATGAKGDTGAKGDTGATGATGATGATGATGATGATGATGAKGDTGAT GAKGDTGATGATGATGAKGDTGATGATGATGATGATGATGATGAKGDTGATGATGAKGDT GATGATGAKGDTGATGATGATGATGATGATGATGATGAKVDTGAKGDTGATGATGATGAT GATGATGAKGDTGATGATGATGATGAKGDTGATGATGATGAKGDTGATGATGAKGDTGAK GDTGATGDKGEKGDTGVTGATGAKGDTGATGATGATGATGATGATGATGATGAKGDTGAT GATGATGATGATGAKGDTGATGATGATGATGATGATGATGAKGDTGATGATGAKGDTGAT GAKGDTGAKGDTGATGAKGDTGAKGDTGAKGDTGATGEKGDTGVTGATGATGATGAKGDT GATGATGATGATGATG Prediction of potential genes in microbial genomes Time: Thu May 26 11:32:36 2011 Seq name: gi|241320352|gb|ACQV01000016.1| Neisseria flavescens SK114 ctg1118407793878, whole genome shotgun sequence Length of sequence - 132412 bp Number of predicted genes - 135, with homology - 132 Number of transcription units - 72, operones - 29 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 31 - 120 69 ## 2 2 Tu 1 . + CDS 324 - 920 471 ## COG2801 Transposase and inactivated derivatives + Prom 993 - 1052 4.8 3 3 Tu 1 . + CDS 1081 - 2334 1620 ## COG0373 Glutamyl-tRNA reductase + Prom 2394 - 2453 7.0 4 4 Tu 1 . + CDS 2580 - 4079 1849 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 4122 - 4161 4.0 + Prom 4099 - 4158 3.4 5 5 Op 1 2/0.250 + CDS 4213 - 5733 2099 ## COG1757 Na+/H+ antiporter + Prom 5740 - 5799 3.1 6 5 Op 2 . + CDS 5831 - 6916 1527 ## COG1472 Beta-glucosidase-related glycosidases + Term 6954 - 6987 4.0 - Term 6935 - 6984 7.5 7 6 Tu 1 . - CDS 6995 - 7702 1038 ## COG0765 ABC-type amino acid transport system, permease component - Prom 7795 - 7854 6.3 + Prom 7797 - 7856 6.4 8 7 Tu 1 . + CDS 8069 - 9424 2308 ## COG0826 Collagenase and related proteases + Term 9441 - 9478 9.1 - Term 9428 - 9465 9.1 9 8 Tu 1 . - CDS 9488 - 10423 1313 ## COG0181 Porphobilinogen deaminase - Prom 10670 - 10729 7.3 + Prom 10636 - 10695 7.0 10 9 Tu 1 . + CDS 10716 - 11981 1340 ## COG5295 Autotransporter adhesin + Term 12010 - 12073 5.1 - Term 12010 - 12042 2.5 11 10 Tu 1 . - CDS 12063 - 12200 160 ## COG0563 Adenylate kinase and related kinases - Prom 12258 - 12317 2.2 + Prom 12196 - 12255 4.5 12 11 Op 1 11/0.000 + CDS 12279 - 12794 649 ## COG0319 Predicted metal-dependent hydrolase 13 11 Op 2 . + CDS 12796 - 13638 1293 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 14 11 Op 3 32/0.000 + CDS 13635 - 14372 381 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 15 11 Op 4 22/0.000 + CDS 14374 - 15060 1050 ## COG2011 ABC-type metal ion transport system, permease component + Term 15067 - 15119 11.2 + Prom 15127 - 15186 5.6 16 11 Op 5 . + CDS 15260 - 16171 1586 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 16181 - 16230 16.3 17 12 Tu 1 . - CDS 16762 - 17787 934 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Term 17854 - 17892 10.2 18 13 Op 1 4/0.042 - CDS 17906 - 18400 647 ## COG4314 Predicted lipoprotein involved in nitrous oxide reduction 19 13 Op 2 24/0.000 - CDS 18397 - 19227 1457 ## COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 20 13 Op 3 6/0.000 - CDS 19224 - 20117 1344 ## COG1131 ABC-type multidrug transport system, ATPase component 21 13 Op 4 3/0.125 - CDS 20177 - 21538 1351 ## COG3420 Nitrous oxidase accessory protein - Prom 21567 - 21626 2.0 - Term 21667 - 21710 10.7 22 14 Op 1 . - CDS 21737 - 23704 2662 ## COG4263 Nitrous oxide reductase - Prom 23729 - 23788 2.1 23 14 Op 2 . - CDS 23813 - 26086 1940 ## COG3901 Regulator of nitric oxide reductase transcription - Prom 26241 - 26300 6.8 - Term 26505 - 26550 7.3 24 15 Tu 1 . - CDS 26570 - 27643 1295 ## COG3203 Outer membrane protein (porin) - Prom 27878 - 27937 5.8 - Term 27760 - 27812 3.4 25 16 Tu 1 . - CDS 27956 - 28801 154 ## COG0101 Pseudouridylate synthase - Prom 28937 - 28996 5.3 - Term 28975 - 29013 7.0 26 17 Tu 1 . - CDS 29027 - 31060 2198 ## COG3170 Tfp pilus assembly protein FimV - Prom 31120 - 31179 3.5 27 18 Tu 1 . - CDS 31186 - 31269 74 ## - Prom 31410 - 31469 3.3 + Prom 31240 - 31299 5.7 28 19 Op 1 3/0.125 + CDS 31366 - 31899 685 ## COG2917 Intracellular septation protein A 29 19 Op 2 2/0.250 + CDS 31899 - 32189 615 ## COG2350 Uncharacterized protein conserved in bacteria 30 19 Op 3 3/0.125 + CDS 32186 - 32458 310 ## COG0271 Stress-induced morphogen (activity unknown) 31 19 Op 4 3/0.125 + CDS 32528 - 33397 1399 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 32 19 Op 5 2/0.250 + CDS 33442 - 34206 1022 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 34217 - 34251 3.0 33 19 Op 6 . + CDS 34303 - 34764 425 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 34773 - 34822 12.2 - Term 34765 - 34804 9.1 34 20 Tu 1 . - CDS 34824 - 35141 435 ## COG3265 Gluconate kinase - Prom 35265 - 35324 3.8 - Term 35270 - 35309 9.1 35 21 Op 1 28/0.000 - CDS 35335 - 36093 956 ## COG0805 Sec-independent protein secretion pathway component TatC 36 21 Op 2 16/0.000 - CDS 36109 - 36771 742 ## COG1826 Sec-independent protein secretion pathway components 37 21 Op 3 2/0.250 - CDS 36775 - 36978 528 ## COG1826 Sec-independent protein secretion pathway components 38 21 Op 4 2/0.250 - CDS 37014 - 37337 379 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 37358 - 37417 1.9 39 22 Op 1 4/0.042 - CDS 37456 - 37779 605 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 40 22 Op 2 24/0.000 - CDS 37812 - 38219 368 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 41 22 Op 3 . - CDS 38264 - 39031 1028 ## COG0107 Imidazoleglycerol-phosphate synthase 42 22 Op 4 . - CDS 39072 - 39389 327 ## gi|241759361|ref|ZP_04757467.1| hypothetical protein NEIFL0001_1772 - Prom 39439 - 39498 7.7 43 23 Op 1 25/0.000 - CDS 39567 - 40304 1033 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 44 23 Op 2 18/0.000 - CDS 40379 - 41023 287 ## COG0118 Glutamine amidotransferase - Prom 41072 - 41131 6.9 - Term 41119 - 41175 12.2 45 24 Op 1 13/0.000 - CDS 41193 - 42149 1245 ## COG0131 Imidazoleglycerol-phosphate dehydratase 46 24 Op 2 . - CDS 42169 - 43254 746 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Prom 43320 - 43379 7.6 + Prom 43383 - 43442 6.1 47 25 Op 1 2/0.250 + CDS 43473 - 43829 358 ## COG3308 Predicted membrane protein 48 25 Op 2 1/0.250 + CDS 43826 - 45658 1800 ## COG3307 Lipid A core - O-antigen ligase and related enzymes + Prom 45738 - 45797 3.0 49 26 Op 1 40/0.000 + CDS 45866 - 46543 1184 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 50 26 Op 2 3/0.125 + CDS 46559 - 47956 1549 ## COG0642 Signal transduction histidine kinase 51 26 Op 3 2/0.250 + CDS 48013 - 50403 2409 ## COG1042 Acyl-CoA synthetase (NDP forming) 52 26 Op 4 12/0.000 + CDS 50479 - 50727 418 ## PROTEIN SUPPORTED gi|225373729|ref|ZP_03750950.1| hypothetical protein NEISUBOT_02020 53 26 Op 5 30/0.000 + CDS 50743 - 51252 175 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 54 26 Op 6 33/0.000 + CDS 51252 - 52001 485 ## COG0336 tRNA-(guanine-N1)-methyltransferase 55 26 Op 7 . + CDS 52016 - 52381 595 ## PROTEIN SUPPORTED gi|225075461|ref|ZP_03718660.1| hypothetical protein NEIFLAOT_00466 + Term 52392 - 52435 10.6 - Term 52533 - 52573 6.1 56 27 Tu 1 . - CDS 52593 - 54002 1487 ## COG3182 Uncharacterized iron-regulated membrane protein - Prom 54218 - 54277 7.1 + Prom 54268 - 54327 1.5 57 28 Op 1 . + CDS 54347 - 54823 868 ## COG0782 Transcription elongation factor + Term 54834 - 54873 10.0 58 28 Op 2 . + CDS 54919 - 55347 262 ## NMB1284 hypothetical protein + Term 55358 - 55411 16.1 - Term 55425 - 55473 14.2 59 29 Tu 1 . - CDS 55482 - 56243 1092 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 56348 - 56407 4.0 + Prom 56515 - 56574 4.5 60 30 Tu 1 . + CDS 56686 - 57636 860 ## COG0583 Transcriptional regulator - Term 57679 - 57716 8.7 61 31 Tu 1 . - CDS 57723 - 58430 634 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 58541 - 58600 5.4 + Prom 58487 - 58546 3.3 62 32 Tu 1 . + CDS 58619 - 60040 1745 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 60049 - 60099 13.1 + Prom 60061 - 60120 8.7 63 33 Tu 1 . + CDS 60172 - 60504 330 ## DP2299 hypothetical protein + Prom 60634 - 60693 3.5 64 34 Op 1 . + CDS 60808 - 61053 318 ## COG3313 Predicted Fe-S protein 65 34 Op 2 . + CDS 61092 - 61859 685 ## gi|241759263|ref|ZP_04757369.1| GumN family protein 66 34 Op 3 . + CDS 61762 - 62079 349 ## gi|225075369|ref|ZP_03718568.1| hypothetical protein NEIFLAOT_00374 + Term 62098 - 62141 12.0 - Term 62082 - 62132 12.2 67 35 Op 1 . - CDS 62179 - 63174 1153 ## COG0078 Ornithine carbamoyltransferase 68 35 Op 2 . - CDS 63318 - 64073 663 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Term 64118 - 64150 -0.2 69 36 Tu 1 . - CDS 64242 - 64598 100 ## gi|241759312|ref|ZP_04757418.1| putative lipoprotein - Prom 64626 - 64685 2.0 70 37 Tu 1 . - CDS 64836 - 65969 1385 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 66009 - 66068 2.9 - Term 66034 - 66073 6.4 71 38 Op 1 . - CDS 66081 - 66701 662 ## NMCC_1439 hypothetical protein 72 38 Op 2 . - CDS 66736 - 67245 788 ## NMA1732 hypothetical protein - Prom 67268 - 67327 8.6 - Term 67270 - 67311 6.1 73 39 Tu 1 . - CDS 67331 - 67909 1005 ## COG3241 Azurin - Prom 67939 - 67998 4.7 74 40 Tu 1 . - CDS 68201 - 68623 406 ## NGK_0793 hypothetical protein - Prom 68745 - 68804 6.2 + Prom 68683 - 68742 7.4 75 41 Tu 1 . + CDS 68778 - 71531 4521 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 76 42 Tu 1 . + CDS 71664 - 72764 1335 ## COG0082 Chorismate synthase + Prom 72767 - 72826 2.8 77 43 Tu 1 . + CDS 72882 - 73319 729 ## NGK_1557 hypothetical protein + Term 73361 - 73412 6.4 - Term 73596 - 73652 11.1 78 44 Tu 1 . - CDS 73667 - 75241 1918 ## COG0306 Phosphate/sulphate permeases - Prom 75361 - 75420 5.6 + Prom 75312 - 75371 5.6 79 45 Tu 1 . + CDS 75395 - 76498 945 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases + Term 76516 - 76553 8.7 - Term 76496 - 76548 13.2 80 46 Op 1 . - CDS 76562 - 78121 1783 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 78277 - 78336 4.9 - Term 78137 - 78183 4.0 81 46 Op 2 . - CDS 78382 - 79173 323 ## NMO_1315 putative fimbrial assembly protein - Prom 79208 - 79267 8.7 - TRNA 79372 - 79447 84.9 # Asn GTT 0 0 - Term 79360 - 79403 0.1 82 47 Op 1 . - CDS 79498 - 80190 203 ## COG3676 Transposase and inactivated derivatives - Prom 80210 - 80269 1.8 83 47 Op 2 . - CDS 80274 - 80633 578 ## COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid 84 47 Op 3 . - CDS 80673 - 81314 618 ## NMC1670 hypothetical protein 85 47 Op 4 . - CDS 81316 - 81852 614 ## COG2229 Predicted GTPase 86 47 Op 5 . - CDS 81863 - 82966 625 ## NMB0476 hypothetical protein 87 47 Op 6 . - CDS 82990 - 84465 1336 ## NMA2010 hypothetical protein - Prom 84517 - 84576 5.3 88 48 Tu 1 . - CDS 84590 - 85873 365 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 86021 - 86080 3.7 + Prom 85960 - 86019 4.8 89 49 Tu 1 . + CDS 86055 - 87116 1226 ## COG1376 Uncharacterized protein conserved in bacteria + Term 87140 - 87181 9.6 - Term 87128 - 87169 9.6 90 50 Tu 1 . - CDS 87212 - 87871 586 ## COG0603 Predicted PP-loop superfamily ATPase - Prom 87927 - 87986 5.8 + Prom 87905 - 87964 5.5 91 51 Tu 1 . + CDS 87992 - 88591 617 ## COG0558 Phosphatidylglycerophosphate synthase + Term 88670 - 88720 19.4 - Term 88650 - 88715 23.4 92 52 Op 1 . - CDS 88732 - 90594 1897 ## CAP2UW1_2831 hypothetical protein - Prom 90652 - 90711 8.5 - Term 90695 - 90745 13.3 93 52 Op 2 . - CDS 90760 - 91044 569 ## NMC1683 hypothetical protein - Prom 91082 - 91141 3.8 + Prom 91012 - 91071 3.8 94 53 Op 1 . + CDS 91276 - 92076 629 ## COG0631 Serine/threonine protein phosphatase + Prom 92089 - 92148 3.0 95 53 Op 2 . + CDS 92175 - 93176 917 ## COG2267 Lysophospholipase 96 53 Op 3 5/0.000 + CDS 93092 - 93913 1019 ## COG0500 SAM-dependent methyltransferases + Term 93922 - 93966 4.0 97 53 Op 4 . + CDS 93967 - 95265 836 ## COG0671 Membrane-associated phospholipid phosphatase 98 53 Op 5 . + CDS 95268 - 95642 429 ## NT05HA_1516 hypothetical protein 99 53 Op 6 5/0.000 + CDS 95706 - 96413 941 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 100 53 Op 7 . + CDS 96410 - 97399 1399 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase + Term 97462 - 97500 -0.4 + Prom 97425 - 97484 4.7 101 54 Tu 1 . + CDS 97507 - 98127 714 ## COG3647 Predicted membrane protein + Term 98143 - 98196 13.4 - Term 98597 - 98643 8.8 102 55 Tu 1 3/0.125 - CDS 98660 - 99916 1875 ## COG2010 Cytochrome c, mono- and diheme variants - Prom 100036 - 100095 6.3 103 56 Op 1 12/0.000 - CDS 100119 - 100730 946 ## COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit 104 56 Op 2 . - CDS 100754 - 102187 1846 ## COG3278 Cbb3-type cytochrome oxidase, subunit 1 - Prom 102211 - 102270 5.7 + Prom 102428 - 102487 6.5 105 57 Op 1 2/0.250 + CDS 102520 - 104271 2125 ## COG3975 Predicted protease with the C-terminal PDZ domain 106 57 Op 2 . + CDS 104350 - 104790 668 ## COG3453 Uncharacterized protein conserved in bacteria + Term 104826 - 104875 9.2 + Prom 105068 - 105127 6.2 107 58 Op 1 2/0.250 + CDS 105226 - 105522 455 ## COG1396 Predicted transcriptional regulators 108 58 Op 2 . + CDS 105542 - 108100 3028 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase + Prom 108796 - 108855 5.0 109 59 Op 1 4/0.042 + CDS 108890 - 109441 664 ## COG4969 Tfp pilus assembly protein, major pilin PilA + Term 109475 - 109516 10.3 + Prom 109461 - 109520 9.0 110 59 Op 2 . + CDS 109541 - 109999 397 ## COG4969 Tfp pilus assembly protein, major pilin PilA + Term 110149 - 110188 8.0 + Prom 110266 - 110325 10.7 111 60 Tu 1 . + CDS 110393 - 110875 502 ## COG1522 Transcriptional regulators + Term 110894 - 110928 5.9 + Prom 110910 - 110969 9.4 112 61 Op 1 2/0.250 + CDS 110993 - 111589 801 ## COG3310 Uncharacterized protein conserved in bacteria 113 61 Op 2 . + CDS 111604 - 111963 77 ## COG2832 Uncharacterized protein conserved in bacteria + Term 111971 - 112006 4.2 114 62 Tu 1 . - CDS 112095 - 112208 113 ## - Prom 112382 - 112441 2.8 115 63 Tu 1 . + CDS 112408 - 113826 1498 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases + Term 113832 - 113870 9.3 + Prom 113960 - 114019 4.5 116 64 Op 1 7/0.000 + CDS 114164 - 115507 1786 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 117 64 Op 2 9/0.000 + CDS 115510 - 116742 1803 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 118 64 Op 3 9/0.000 + CDS 116735 - 117511 1133 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 119 64 Op 4 9/0.000 + CDS 117511 - 118137 916 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 120 64 Op 5 7/0.000 + CDS 118141 - 118734 1013 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 121 64 Op 6 7/0.000 + CDS 118748 - 119965 1966 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF + Term 119976 - 120009 4.0 + Prom 119978 - 120037 5.6 122 64 Op 7 7/0.000 + CDS 120098 - 121168 972 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 123 64 Op 8 . + CDS 121186 - 121407 464 ## COG2991 Uncharacterized protein conserved in bacteria + Term 121592 - 121623 2.1 - Term 121575 - 121616 7.1 124 65 Op 1 16/0.000 - CDS 121632 - 121787 265 ## PROTEIN SUPPORTED gi|225368008|ref|ZP_03747866.1| hypothetical protein NEIMUCOT_01871 125 65 Op 2 . - CDS 121818 - 122051 395 ## PROTEIN SUPPORTED gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 - Prom 122202 - 122261 8.5 - Term 122254 - 122294 12.2 126 66 Op 1 . - CDS 122302 - 123630 1316 ## COG1114 Branched-chain amino acid permeases 127 66 Op 2 . - CDS 123632 - 124528 892 ## COG1354 Uncharacterized conserved protein - Prom 124558 - 124617 2.3 128 67 Op 1 . - CDS 124621 - 125088 431 ## gi|241759322|ref|ZP_04757428.1| hypothetical protein NEIFL0001_1874 129 67 Op 2 . - CDS 125102 - 125878 634 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Prom 126013 - 126072 5.3 + Prom 125938 - 125997 5.9 130 68 Tu 1 . + CDS 126065 - 126529 853 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 126552 - 126596 11.5 - Term 126539 - 126588 2.1 131 69 Tu 1 . - CDS 126612 - 127895 1930 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 127934 - 127993 4.3 + Prom 128008 - 128067 6.2 132 70 Op 1 . + CDS 128094 - 128489 532 ## gi|241759325|ref|ZP_04757431.1| hypothetical protein NEIFL0001_1879 + Term 128493 - 128540 6.5 133 70 Op 2 . + CDS 128563 - 129885 522 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 + Term 129901 - 129940 9.1 + Prom 129948 - 130007 4.7 134 71 Tu 1 . + CDS 130113 - 131423 2064 ## COG2252 Permeases + Term 131435 - 131482 15.0 - Term 131426 - 131467 12.0 135 72 Tu 1 . - CDS 131506 - 132063 872 ## gi|241759356|ref|ZP_04757462.1| hypothetical protein NEIFL0001_1882 - Prom 132201 - 132260 10.1 Predicted protein(s) >gi|241320352|gb|ACQV01000016.1| GENE 1 31 - 120 69 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241320352|gb|ACQV01000016.1| GENE 2 324 - 920 471 198 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 193 20 213 216 190 52.0 2e-48 MKQLGLKAKIRAKKAYRHPTMGAISEHLLKRRFTAKKPNEKWLTDVTELKGKDGKLYLSP ILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAE HSMIQSMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQIDDYIDYYNRERCSL KLKKPSPVAYRTQLAQSA >gi|241320352|gb|ACQV01000016.1| GENE 3 1081 - 2334 1620 417 aa, chain + ## HITS:1 COG:NMA0760 KEGG:ns NR:ns ## COG: NMA0760 COG0373 # Protein_GI_number: 15793735 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Neisseria meningitidis Z2491 # 1 415 1 415 415 647 83.0 0 MQLTVVGLNHQTAPLSIREKLAFAAANLPDAVSNLARSEAAEEAVILSTCNRTELYCVGE TEKIIDWLAQYHDLPAEEIRPYLYTLDNNETVRHAFRVACGLDSMVLGEPQILGQIKDAV RVAQEQESINTHLNALFQKTFAVAKEVRTDTAVGENSVSMASASVKMAEQIFPSISDLNV LFIGAGEMIELVATYFAAKNPKLITVANRTHQRAQELCDKLGVNAEACLLNELPDILHDY DVVVSSTASQLPLVGKGMVERALKKRHNMPVFLLDLAVPRDIEAEVGELEDAYLYTVDDM MDIVQSGKDARKKAAAAAESMVEEKVSEFIRLQKNRQSVPLIRALRDEGERARRQVLENA MKQLAKGVSAEDVLERLSIQLTNKLLHSPTRTLNKAGSDNSELIDAVAQIYHLDQHD >gi|241320352|gb|ACQV01000016.1| GENE 4 2580 - 4079 1849 499 aa, chain + ## HITS:1 COG:NMB0532 KEGG:ns NR:ns ## COG: NMB0532 COG0265 # Protein_GI_number: 15677994 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 21 499 20 499 499 672 72.0 0 MNIKTNTYLALAVLSASLLSGCDKVSTFFGKDENKELVQRIETNTDDGKVGMLLPDFAQL VQNEGQAVVNIQATPAKRTATPDDDHSMDLSQFPDNDPFYEFFKRLVPNMPDMPQEDTES DALNFGSGFIISKDGYILTNTHVVAGMGNIKVLLNDKREYTAKLVGSDAQSDVALLKIEP QEDLPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTSGIVSAKGRSLPNENYTPFIQTDVA INPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKANGKVQRGQ LGVVIQEVSYDLAKSFGLDKASGALIAKIMPNSAAQQAGLQVGDIVRKVNGEEVRASSDL PVMVGSIMPGKEVTLSIWRGGKQTDVKVKLGSAAEQTETSAKEAEHPQHEGSHDGFTVEN AGVTLQVENADGKQRLIVLRVSGAAERAGLKRGDEIIAVSQISVNDESTFRSALESSGKN VPLLVQRDGNTLFLALNLQ >gi|241320352|gb|ACQV01000016.1| GENE 5 4213 - 5733 2099 506 aa, chain + ## HITS:1 COG:NMB0531 KEGG:ns NR:ns ## COG: NMB0531 COG1757 # Protein_GI_number: 15676438 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis MC58 # 1 506 1 506 506 759 83.0 0 MQLINYSNSILSIVPAAIALALAIATRRVLLSLGVGIIVGSFLLVGGNPLDALVHLKDMA VSLTWADGNWSLGKPKILLFLVLLGIFTSLLTHSGSNQAFADWAKQHIKGRRGAKLLTAC LVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDSTAAPMCVLMPVSSWGASIIA TLAGLLVTYNITDYTPMGAFVAMSLMNYYAVFALIMVFVVAWFSFDIGSMARLERAALNE IHDETVETGHPNGRVFALIVPVLVLIITTVSAMIYTGAQASETFSLLSAFENTDVNTSLV FGGTCGVLAVILCTIGTIKTSDYPKAIWQGIISMRGAITILILAWIISTVVSEMHTGEYL STLVAGNIHAGFLPVILFMLAGVMAFATGTSWGTFGIMLPIAAAMAVKVEPSLIIPCMSA VMAGAVFGDHCSPISDTTILSSTGAHCNHIDHVTSQFPYALTVAASAASGYLALGMTGSA PLGFVVTGIVMVILIFILKDKKKATA >gi|241320352|gb|ACQV01000016.1| GENE 6 5831 - 6916 1527 361 aa, chain + ## HITS:1 COG:NMA0708 KEGG:ns NR:ns ## COG: NMA0708 COG1472 # Protein_GI_number: 15793686 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Neisseria meningitidis Z2491 # 1 361 1 361 361 578 77.0 1e-165 MNTPHLPRGPVMADVAAYHLTEEEKQRLLDPAVGGVILFRRNFENVSQLKALVQEIKAVR TPELIIAVDHEGGRVQRFIDGFTRLPAMNVLGEIWDNEGKEAACAQAEQVGWVLATELSA CGIDLSFTPVLDLDWGQCAVIGNRSFHRDANIVTQLALALQKGLNKGGMKSCGKHFPGHG FVEGDSHHVLPCDERSREALEAADLIPFRALSQAGMAAVMPAHVVYPQTDNQPAGFSEKW LKQILRQEIGFNGVIFSDDLTMEGACGVGGIKERARLSFEAGCDIVLVCNRPDLVDELRD GFHAPANADLAARWQYMANTLTVQEAADIMATEEFQAAQQATAKLATPKDISGGIKVGEA F >gi|241320352|gb|ACQV01000016.1| GENE 7 6995 - 7702 1038 235 aa, chain - ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 1 235 14 248 248 358 89.0 7e-99 MFLYGVLTTLGLTVVATAGGSILGLLLALARLINPEKAGVPMRALAWVLRKISFWYVTLF RGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAIDLRRSYGALIAGSLALIANSGAYIC EIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASEFITLLKDSSLLS VIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFLRLESRYNPQHR >gi|241320352|gb|ACQV01000016.1| GENE 8 8069 - 9424 2308 451 aa, chain + ## HITS:1 COG:NMB1664 KEGG:ns NR:ns ## COG: NMB1664 COG0826 # Protein_GI_number: 15677513 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Neisseria meningitidis MC58 # 1 451 1 451 451 923 98.0 0 MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFAKLDVLEQGIKEAHERN KKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLIMTVREKWPEMPIHLSVQA NTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDIELEVFIHGALCIAYSGRCLL SGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLLQGFNFEKAQEEANQNFEGINGQ KRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNSKDLRGIEVVEKLAKIGVDSLKVEG RTKSLYYVARVAQSYRKAIDDAVAGRPFDYGLLSELEGLANRGYTSGFLERHQTQDYQNY LSGHSIAKQSQYVGHVTEIDENGWATIEVKNRFAVGDSLEIIHPSGNQTIKLEQMTRKGQ PVDVAPGNGIQVKIPNMQGKEKALIARIMNP >gi|241320352|gb|ACQV01000016.1| GENE 9 9488 - 10423 1313 311 aa, chain - ## HITS:1 COG:NMA0718 KEGG:ns NR:ns ## COG: NMA0718 COG0181 # Protein_GI_number: 15793695 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Neisseria meningitidis Z2491 # 1 310 1 310 311 556 94.0 1e-158 MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTRGDQILDRTLSKVGGKG LFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMP KGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELD ERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGG SCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDGAE ELIAAVLQEQT >gi|241320352|gb|ACQV01000016.1| GENE 10 10716 - 11981 1340 421 aa, chain + ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 69 421 837 1190 1190 75 30.0 2e-13 MKLSTAAVVLLSALGVSTLANAADVFISSSSGTEAAKTGHSKDIAVGLNARANENNTDVS IGGATSVGVDTVAKGNGATALGYAAKADGANASALGNGANATGLATTAVGVSTQATGAYS VAVGSNAKATGFGSVSIGLASIPDTGATKNYAVSVGAFSGADVENGVALGSYSKATVNKG AKGYDPSTQTATTETNEVWKATHAAVSVGDVDNADPTKKVTRQITSVAAGTKDTDAVNVA QLKSLDGKVEKNKTDIATNKADIATNKTNIATNTGNIATNTANIATNTANIATNTANIAT NTGNIATNTANIQTNANNIAAINTQLADNNDSINELRGNVNLLNKDLRGGVASAIAHASV PQSTKAGAIGVGVGTGFYGGQSAVSLGVSGVTPNENWVFKASVSTNSRGNYGVGAGAFYQ W >gi|241320352|gb|ACQV01000016.1| GENE 11 12063 - 12200 160 45 aa, chain - ## HITS:1 COG:PM0284 KEGG:ns NR:ns ## COG: PM0284 COG0563 # Protein_GI_number: 15602149 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Pasteurella multocida # 1 45 170 214 214 77 82.0 4e-15 MYHNTTKPLVDYYQAEAKAGNTQYFRLDGTQKVEDVSKALDKILA >gi|241320352|gb|ACQV01000016.1| GENE 12 12279 - 12794 649 171 aa, chain + ## HITS:1 COG:NMB0538 KEGG:ns NR:ns ## COG: NMB0538 COG0319 # Protein_GI_number: 15676444 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Neisseria meningitidis MC58 # 1 169 1 169 169 289 91.0 2e-78 MKRAKQYPFLSLQRQRFHLNFENASSAANLPSERDFYRWTWSALKNEYRRAGISLILLDE EEARDYNRDYRGKDYATNVLSFALNEGEILPDQFSDGLYGDLVICPQVVLKEAAEQGKTP EQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAAGFPNPYQEDEY >gi|241320352|gb|ACQV01000016.1| GENE 13 12796 - 13638 1293 280 aa, chain + ## HITS:1 COG:NMB0537 KEGG:ns NR:ns ## COG: NMB0537 COG4535 # Protein_GI_number: 15676443 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Neisseria meningitidis MC58 # 1 274 1 274 274 467 94.0 1e-131 MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAETLTRLEKVLDFAELEV RDAMITRSRMNVLKENDSIERITAYVIETAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP EQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVG EIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFFGTEYSSEEADTIGGLVIQELGH LPVRGEKVIIGSLQFTVARADNRRLHTLMATRIKENTDKP >gi|241320352|gb|ACQV01000016.1| GENE 14 13635 - 14372 381 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 236 11 259 329 151 35 2e-35 MIILDHVSKHYQTRDNKDFVAIEPTSLEIKQGEIFGLMGYSGAGKSTLLRLINLLERPDT GTVSVCGQELTALNATQLRHARQNIGMVFQQFNLLSNRTVAKNVAFPLEIAKWPSKKIQA RVEECLEIVDLQDRANHYPSQLSGGQKQRVGIARALAPQPQVILADEPTSALDPATTRSV LKCLEDINRRFNVTIVIVTHEMSVIRRLCDRAALLDKGRLLEIVEVHGNQIHAQSEIGQE LIRED >gi|241320352|gb|ACQV01000016.1| GENE 15 14374 - 15060 1050 228 aa, chain + ## HITS:1 COG:NMB1947 KEGG:ns NR:ns ## COG: NMB1947 COG2011 # Protein_GI_number: 15677777 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Neisseria meningitidis MC58 # 1 228 1 228 228 287 87.0 1e-77 MANLTFESAVETIVSMKGEIIQALGETFIMVGLSTTFAVIFGTILGVLLFVTSSHQLHYN KQLNLFLDNLVNLMRAFPFVILMIAMIPVTRAIIGTTIGPVAASLVLSVSGLFYFARLVE QNLREVPKGVIEAASAMGASTMSIICKVLLNEARAGMVSSITVLAIGLLSYSAAAGMIGG GGLGDLAIRYGYYRYQMEVIIFIVAILVLLVILIQGIGNRLARKLDKR >gi|241320352|gb|ACQV01000016.1| GENE 16 15260 - 16171 1586 303 aa, chain + ## HITS:1 COG:NMA0506 KEGG:ns NR:ns ## COG: NMA0506 COG1464 # Protein_GI_number: 15793505 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Neisseria meningitidis Z2491 # 3 288 1 286 287 441 87.0 1e-123 MQINTFFKTLSAAALAIVLAACGGQKDSAPAASAASSADNGAEKKEIVFGTTVGDFGDMV KDQIQPALEKKGYKVKLIEFTDYVRPNLALAEGELDINIFQHKPYLDDFKKEHKLDIVEA FQVPTAPLGLYPGKLKSLDEVKDGVSVSAPNDPSNFARALVMLNELGWIKLKADVDPLTA SKNDIAENPKNIQIVELEAAQLPRSRADVDFAVVNGNYAMSSGMKLTEALFQEPSFAYVN WSAVRTADKDSQWLKDVTEAYNSDEFKAYSQKRFAGYKYPAAWGENAAAGAQAEAASTAS ATK >gi|241320352|gb|ACQV01000016.1| GENE 17 16762 - 17787 934 341 aa, chain - ## HITS:1 COG:SMa1188 KEGG:ns NR:ns ## COG: SMa1188 COG1477 # Protein_GI_number: 16263101 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Sinorhizobium meliloti # 1 321 1 311 334 229 40.0 5e-60 MSTPLTRRRFLAIAATLAAGVGIPFAISRKTNQPTHPVSPNQEEQPVIWRGIALGSGAEL RLFGVERKQAEILVNKVLAEVSRLEKIFSLYRDDSLISRLNREGRLKNPPSDFLQLLSIS RDIHQLTQGAFDPSIQPLWNLYADHFRRNPKTETPPSERSIKDTLKLVDFNKVDFDTKEI RFAQKGMGLSLNGIAQGYITDKVVELLKQQGVTQALIDMGEIYGFDNANRREWNVSIRNP DQEDQILTTIAMKNQAFATSGGYGTVMDEAAKFTHLFDPRTGGSQPRYKSMSVMAESAAV ADAFSTAFSIMDEAAIRTAAQVKKAQVWLVMPNNELKKIGS >gi|241320352|gb|ACQV01000016.1| GENE 18 17906 - 18400 647 164 aa, chain - ## HITS:1 COG:NMA0765 KEGG:ns NR:ns ## COG: NMA0765 COG4314 # Protein_GI_number: 15793740 # Func_class: C Energy production and conversion # Function: Predicted lipoprotein involved in nitrous oxide reduction # Organism: Neisseria meningitidis Z2491 # 1 164 1 164 164 265 76.0 3e-71 MRKILFTAFTILALSACSKEENTPPPTPQQISDSAVGHYCSMNLTEHNGPKAQIFLNGKP DKPVWFSTIKQMFGYTKLPEEPKGINAIYVTDMGKVKDWEKPNADAEWIDAKKAYYVIES SFIGGMGAEDALPFADKAQAEKFAKEKGGRVVGFAEMPDEYIFK >gi|241320352|gb|ACQV01000016.1| GENE 19 18397 - 19227 1457 276 aa, chain - ## HITS:1 COG:SMa1185 KEGG:ns NR:ns ## COG: SMa1185 COG1277 # Protein_GI_number: 16263099 # Func_class: R General function prediction only # Function: ABC-type transport system involved in multi-copper enzyme maturation, permease component # Organism: Sinorhizobium meliloti # 1 276 1 275 275 221 52.0 8e-58 MNPVWIITGKEVRDSLRNRWVLAAALLLAALALSLGFLGSSPTGTVKVDPLTVTVVSLSS LSIFLIPLIAMLLSYDALIGEIERGTMALLLSYPISRNQILAGKFIGHLIILALATTAGY GLAGITLQLANGGFDLAAWKPFALLIVASVILGAAFLSMGYLISAKVKERGTAAGIAIGV WLFFVVIFDMALLGILVADTEQVITAPVVETILLFNPSDIYRLLNLTGYENTAMYAGMAG LSDQISLTMPVLLTAQVLWVIIPLVLAAWIFGKRQI >gi|241320352|gb|ACQV01000016.1| GENE 20 19224 - 20117 1344 297 aa, chain - ## HITS:1 COG:NMA0763 KEGG:ns NR:ns ## COG: NMA0763 COG1131 # Protein_GI_number: 15793738 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Neisseria meningitidis Z2491 # 2 204 13 215 216 359 94.0 4e-99 MTNHVELRNVTKQFGSQKAVNQVDLVLKAGESVGMAGHNGAGKSTIMKLILGLITPTEGE VMLLGERTGSKAGALLRSQIGYLPETVALHPSLTGIETMDFYAKLKKQPLSKNRELLERV GISQAARRRVGTYSKGMRQRLALAQALLGEPKVLLFDEPTTGLDPASRQMFYEVVRELNG RGATVLLSTHALAELDGHADRIIVMKNGVKVADGSMDELHVQSGLPLTVNVRLKEARPLS ERWQPLSDGLSYKAQCKAEERMGLLSELGDLGNLAYIDIHTPTLDDMYAQFLKREDV >gi|241320352|gb|ACQV01000016.1| GENE 21 20177 - 21538 1351 453 aa, chain - ## HITS:1 COG:NMB0578 KEGG:ns NR:ns ## COG: NMB0578 COG3420 # Protein_GI_number: 15676483 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrous oxidase accessory protein # Organism: Neisseria meningitidis MC58 # 110 453 1 344 344 607 87.0 1e-173 MTHTPSHRSKWQRAAFVLLLGSMVQTAFAAVINVSAQDNLNDALARAQAGDTLKLASGTY KTKLYIDKPITIEGPADRSAKIVGDRSGRTIAVHAPDVTLRNLTVSNSGLSLPAMDAGIY LEETAPRALIEHNNVLDNSVGVYIHGAAESMVLENKIVGEATLRVNERGNGVTVWNAPGA QVVDNDISKGRDGIFSNTSTNNTYKGNRFSDLRFAVHYMYTNDSEVSNNISVGNNMGYVL MFSERLKVYGNIAVGSRDQGIMLNYVNYSDINDNIINKAGKCVFAYNANFNKIFDNHFEN CQIGIHFTAAIEGTSLFNNSFINNESQVKYVSTRFLDWGEGGRGNYWSDNSAFDLDGDGF GDNAYRPNGIIDQIIWRAPVSRLLMNSPAVSIVKWAQSQFPAILPGGVIDSKPLMKPISN KTSTKYEAMKDELLHEANTRQSNWSNAENGSLN >gi|241320352|gb|ACQV01000016.1| GENE 22 21737 - 23704 2662 655 aa, chain - ## HITS:1 COG:SMa1182 KEGG:ns NR:ns ## COG: SMa1182 COG4263 # Protein_GI_number: 16263096 # Func_class: C Energy production and conversion # Function: Nitrous oxide reductase # Organism: Sinorhizobium meliloti # 1 655 1 637 639 871 64.0 0 MSDEKLEQNGLSRRSFLGTAAASGAGIAGAGLLGLAGCSNGEGDKAAASGAAPAEKAAAH SAEPGKMTSEVGPGELDQYYGFLSGGQSGEMRLIGLPSMRELMRIPVFNMDSATGWGRTN ESLKVLNGNITEETRKFLQDSGLRCYPNGDLHHPHLSFTDQTYDGRYAYANDKANTRVCR IRLDVMKTDKIIDIPNASGIHGLRPQRYPKTGYVFANGEHIVPVDGVGKWDDAKTWNAVY TAIDGETMEIAWQVLVDGNLDNGDADYQGKYSFSTCYNSERALTVQGASSNEQDWCVVFN LAAIEEGIKKGDFKEVNGVKMLDGRAEANSPYTRYIPVPNSPHGCNASPDGKYIMLNGKL SPTVTVLDVSKLDDLFAGKIKERDVVVAEPQLGLGPLHTAFDGRGNAYTTLFIDSQMVKW NIDDAIKAYKGEKIDPIKQKLDVHYQPGHNHTTMGETKEADGKWLVSLNKFSKDRFLNAG PLKPECDQLIDISGDEMRLVHDNPTFAEPHDFCLVSASKVNPSKTWDRKDPWFWKDALEQ AQKDGVELEKAAKVVREGNKVRVYMTAVAPAFSIPQFEVNQGDEVTVYVTNVETIEDLTH GFTLEGYGIAMEISPQATSSVTFKAVRPGVHWYYCQWFCHALHMEMSGQMIVKPK >gi|241320352|gb|ACQV01000016.1| GENE 23 23813 - 26086 1940 757 aa, chain - ## HITS:1 COG:BMEII0975_1 KEGG:ns NR:ns ## COG: BMEII0975_1 COG3901 # Protein_GI_number: 17989320 # Func_class: K Transcription # Function: Regulator of nitric oxide reductase transcription # Organism: Brucella melitensis # 1 491 1 470 470 355 39.0 3e-97 MIVSLPAYAERLPDFLAKIQPSEIFPGADRYGKPEGKPLVARVYKGEEQLGLVYITTDVV NTRGYSSKPIDTMIALANDGTIAGAKLVEHHEPIMLIGIPQSRVDKFIDKYIGLNFIKNP PQPGVAPADIISGATVTLMVINDSIQRSVKSVIHQYHLGTDKATQAGAAAASGEQAANEP AVQTRPRRAVNPDKQDIQSWNALLEQKAVGHLHISVDDINKLFEKGGKAGVADHAEQGDG NDTFVDLYVALVSQPSIGKSLLGEAGWNNLQKRLQPGQQAIMVAGEGRYSWKGSGYVRGG IFDRIEMIQGDTSFRFTDAQHERVVALAAEGAPAFKEVSWFTIPEGVEFDAAEPWRLQLM IQRVLSVNDKAFVTADLDYELPKGYYVDDPKAPPVEISAPVEQVAAVASAPESTGIAEDA TAGDDGVSNQLWKQVWKAKQGQIIVVGIALTILLLVFLFQDWIVRYEKWYDRFRLCFLTF TLVYIGWYAQAQLSVVNTLTLFSAILTEFHWEFFLMDPLVFILWLFTAATMLLWNRGTFC GWLCPFGSLQELTNRVAKKLGVKQITVPHLLHTRLTAIKYVIFFGLLAISLYDLGTAEKF AEVEPFKTAIILKFMREWWFVLFAAALLIAGLFIERFFCRYLCPLGAGIALPGRFRVFDW LRRYKMCGNPCQICTHECPVQAIAPEGDIHPNECIQCLHCQVMYHHDTRCPQVVATNKKK QKQAAAKSEQYDAAATKNAQEQVVQFVKKESAISVDK >gi|241320352|gb|ACQV01000016.1| GENE 24 26570 - 27643 1295 357 aa, chain - ## HITS:1 COG:NMA0398 KEGG:ns NR:ns ## COG: NMA0398 COG3203 # Protein_GI_number: 15793406 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Neisseria meningitidis Z2491 # 1 357 1 329 329 320 53.0 2e-87 MKKSLIALTLAALPVAAMADVTLYGQIKAGVEISQTKEKVAGQTTKSKTATEIADFGSRI GFKGHEHLGSNLNAIWQVEQNTSIAGGDSGFANRESFLGLEGGFGKVRVGNLDTALNDSS DSFDPWESSDANADALQLGKIKRVDSRKVSVRYDTPVFGGFSASVQYQPRDNANPSDKYD HAVKSRASYDLGLNYENSGFFGRYAGSFAKHAVLDAGYLDTFNGNTTLTAGTYKDHQAHR LTAGYDANNLMVAVVGQYEGFKEDVANAKKNERVEVGATAAYRFGNVTPRVSYAHGFKAK EKGVKQENSVYNQVIVGADYDFSKRTSALLSAGWLKEGKGDNTYEKTAGTVGLRHKF >gi|241320352|gb|ACQV01000016.1| GENE 25 27956 - 28801 154 281 aa, chain - ## HITS:1 COG:NMB2036 KEGG:ns NR:ns ## COG: NMB2036 COG0101 # Protein_GI_number: 15677859 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Neisseria meningitidis MC58 # 13 271 7 265 265 412 75.0 1e-115 MTEQANTTGHLMQRWALTLSYDGSRFYGWQKQAGDLPTVQTALEQALSSIAGEQINTIVA GRTDTGVHATAQVVHFDTSVSRPEQAWVRGVNAHLPDGVAVLVAQKVAPHFHARFDAYGR HYRYLLESSPVRSPLLVGRVGWTHLKLDLNLMRQAAALLEGEHDFSSFRAAECQAKSPIK TLYRTSISGTSRYLCLDLHGNAFLHHMVRNIMGALVYVGSGRISVDEFESVFHAKSRLKA PPTFMSDGLYLTGVDYPDKFGVTQLSLPEWMSVLGNDFQTV >gi|241320352|gb|ACQV01000016.1| GENE 26 29027 - 31060 2198 677 aa, chain - ## HITS:1 COG:NMB0341 KEGG:ns NR:ns ## COG: NMB0341 COG3170 # Protein_GI_number: 15676256 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimV # Organism: Neisseria meningitidis MC58 # 1 531 35 547 875 209 37.0 1e-53 MKKHHNIKLITASIALMTSLSASAGLGGLNVQSHLGEPFTGSITVTGEEAQALLNGGKAT ISNGNLRAAVRKSGDKAVVTIRSSKAIKDPVLVFQVGVGAQSREYTAIIDPAGYDSKDAA SVRIRPVTESQSSEPTRNAQQPATKNNKAAGNQTARARKDVQRKAEKKQVQTASAKNDTA ARSGRQHLVRTGETLIAIASSIRPQGMTLDQTIQALVNANPDVFIDNNANRMLAGKVLNI PNRSELQRLAASAPVKTNTAAEKGNETANATETKTEKPVVQPEAQTEAQVKDAGVNTQQQ EEVKQASAEQTEQAASAAVNENAASTVPASDGQEAMASDAQENVVASEPVATTDSVAEQT ESESDGNLWKWLLAGGAALIAAWLLLKAAGKRNDELEEAPVSRKDEEKVVQKNVAASAVA VAATKVTSSEKTQDGLFIEDDFEDDVVINEVEESSNIDDVKLDLGKIDNSQAGILSGAVT HDVETEQRRHADWDSIESTESVYEPEPENPYQPVSVVMPERKEEQVNTFAEFDLAAEKKV SESRNEEPLEFTVETPEASDGHVLPFDVKQDQDLQIQETKEEVEKEEAASEFVIEEGALE WGAEDVSVAADKSNSERGFVSESVGMTAPLEAKYDLAKMYIEIGDPEAARETLQGLIEEA EGDILHKAQKLMKELGA >gi|241320352|gb|ACQV01000016.1| GENE 27 31186 - 31269 74 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKYLFWVGEICKKETQACKSNRFAKEF >gi|241320352|gb|ACQV01000016.1| GENE 28 31366 - 31899 685 177 aa, chain + ## HITS:1 COG:NMA2145 KEGG:ns NR:ns ## COG: NMA2145 COG2917 # Protein_GI_number: 15795016 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Neisseria meningitidis Z2491 # 1 176 1 176 176 204 64.0 8e-53 MKILSDLFAVFLFFITYIITKDMIAATTVAVIVGIAQAALTFWKHRKLDTMQWVSLILIV FFGGATILLKDNRFIMWKPTVLFWIGAIVMLFSHLAGKNGLKAVIGKEMQLPDFVWTRLT YAWIGFLIFMGAANLFVFTYFPDQWVNYKLFGTLGFTIIFSIAQGMYLMRFQPKEDQ >gi|241320352|gb|ACQV01000016.1| GENE 29 31899 - 32189 615 96 aa, chain + ## HITS:1 COG:NMA2144 KEGG:ns NR:ns ## COG: NMA2144 COG2350 # Protein_GI_number: 15795015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 148 81.0 2e-36 MEYFMLLATDAEDVHEARMAARPAHLARLEELKAQGRLLTAGPNPLPDNPERVSGSLIVA QFESLDDAQEWAEQDPYVDAGVYAEVLIKPFKAVFK >gi|241320352|gb|ACQV01000016.1| GENE 30 32186 - 32458 310 90 aa, chain + ## HITS:1 COG:NMA2143 KEGG:ns NR:ns ## COG: NMA2143 COG0271 # Protein_GI_number: 15795014 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Neisseria meningitidis Z2491 # 7 90 6 89 92 119 65.0 1e-27 MSNMRQIIEERLWTLEPEFFDFEDESHLHAGHAGNKGGGHYAIVVVSNAFENIGRLQRQR MIKQLLQDLFSDGLIHALSIKAATPDEYFH >gi|241320352|gb|ACQV01000016.1| GENE 31 32528 - 33397 1399 289 aa, chain + ## HITS:1 COG:NMA2142 KEGG:ns NR:ns ## COG: NMA2142 COG0760 # Protein_GI_number: 15795013 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis Z2491 # 1 289 1 288 288 286 57.0 4e-77 MKKTYFASALMLALTSGTLFAQTLVTVNGQAIDSSVIDDQVASVRASNPNVQDTPELRQM LTERQIISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAVFENDLL GQAFAAHIVRQYPVQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSNAQKAIADLDAKKS FVSVLNQYSIDEAAKKAGGIPKAYIPLKDLQESAPPLYAAVKDLKKGAHTKTPLQNGNLY AVFYVNDRRNVTVPSYEAAKNEIGSDLQAARVDAAIQSLLKKASIKVNK >gi|241320352|gb|ACQV01000016.1| GENE 32 33442 - 34206 1022 254 aa, chain + ## HITS:1 COG:NMA2141 KEGG:ns NR:ns ## COG: NMA2141 COG0760 # Protein_GI_number: 15795012 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Neisseria meningitidis Z2491 # 19 254 4 239 239 269 62.0 5e-72 MNIKPKTAVLAILALSTVGLATAKAPEIDPARIDSMVAEVLRQADQHPNQTAKPDGQAIR KDVVTRLQTLEILKNEAIKAGLDKDAEVQNQFKNVEAEFYANQYAAYLERQTAVDDAELR RFYDQQTRIIKLQQVSFASAEEVRAAQELLLKGLSFEELMKRYPNPEQEFDGFISPQQLS PQLATAFADMNRGDVTHEPIQMGNRFYLFKLSAVERNPNAEPFELVRNQIAQAVKRQKVE NQIERILKENGINP >gi|241320352|gb|ACQV01000016.1| GENE 33 34303 - 34764 425 153 aa, chain + ## HITS:1 COG:NMA2140 KEGG:ns NR:ns ## COG: NMA2140 COG1490 # Protein_GI_number: 15795011 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Neisseria meningitidis Z2491 # 1 152 1 152 163 237 75.0 6e-63 MRTVIQKVTQAKVDVLSENSCETCGEINNGFMILLGVTHSDTEADAKYIADKTANLRIFE DENGKLNLSLKDVGGSILLVSQFTLYADARSGRRPSFSNAAPAELADKLYQYTAQLLREH GLTVETGRFQTHMQVSLCNDGPVTLLLDSQKTF >gi|241320352|gb|ACQV01000016.1| GENE 34 34824 - 35141 435 105 aa, chain - ## HITS:1 COG:NMA0412 KEGG:ns NR:ns ## COG: NMA0412 COG3265 # Protein_GI_number: 15793417 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Neisseria meningitidis Z2491 # 1 105 68 172 172 159 79.0 1e-39 MTEQAKNGEKYSIVTCSALKRQYRDILRGAEGKVAFIHLTPPQAINLERMLSRQGHYMKA GMLDSQLEILEELGADEYGVKIDNPGSPEAVEADIVNWVKAQGLI >gi|241320352|gb|ACQV01000016.1| GENE 35 35335 - 36093 956 252 aa, chain - ## HITS:1 COG:NMB0599 KEGG:ns NR:ns ## COG: NMB0599 COG0805 # Protein_GI_number: 15676504 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Neisseria meningitidis MC58 # 1 252 1 252 256 378 84.0 1e-105 MSEPQHEQPVQPLIEHLLELRRRMMWIVIGIVVCFLGMMPFAQQLYTFVAEPLMANLPKD TSMIATDVIAPFFVPVKVTLMAAFLLSLPHTLYQVWAFVAPALYQNEKRLITPLVLSSVT LFFVGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLSFILGMFVAFGTTFEVPVVVV LLAKMGIVSTAQLKNARPYVIVGAFVVAAIITPPDVISQTLLAVPLILLYEAGIWFSRFA KVKTQQEDEDTP >gi|241320352|gb|ACQV01000016.1| GENE 36 36109 - 36771 742 220 aa, chain - ## HITS:1 COG:NMB0600 KEGG:ns NR:ns ## COG: NMB0600 COG1826 # Protein_GI_number: 15676505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis MC58 # 1 220 1 227 228 253 64.0 2e-67 MFDFGLGELLLVGVVALIVLGPERLPQAARTAGRLVGKLQGFVNNVKQELNTQAELDELR KVKQEFETAASEFRDGIKDLGNDAQKKLSDISDGLKPWERLPEQKTPADFGVDELGNPLP DLASNSTEHESAIQTSERGEAVQTQELVEAENAESEQDRAWREYLTASVLPAPAVEVSYI ESPVADVPPLHTTSLRKQAMSRKRDMRPKFHAKPKLRVRK >gi|241320352|gb|ACQV01000016.1| GENE 37 36775 - 36978 528 67 aa, chain - ## HITS:1 COG:NMA0805 KEGG:ns NR:ns ## COG: NMA0805 COG1826 # Protein_GI_number: 15793779 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis Z2491 # 1 67 1 67 67 89 92.0 1e-18 MGSFSLWHWIIVLIIVVLVFGTKKLRNVGKDLGGAVHDFKQGLNEGTDGKDAKKDEVIEH KKDEDKA >gi|241320352|gb|ACQV01000016.1| GENE 38 37014 - 37337 379 107 aa, chain - ## HITS:1 COG:NMB0602 KEGG:ns NR:ns ## COG: NMB0602 COG0537 # Protein_GI_number: 15676506 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 1 106 1 106 107 187 88.0 3e-48 MDNCIFCKIATKDIPAQTVYEDDEMLCFKDIRPATPVHLLLIPKVHFDSLAHATVEHQTL LGKMMLKVPQIAHEAGLTDGFKTLINTGKGGGQEVFHLHIHIMGTPT >gi|241320352|gb|ACQV01000016.1| GENE 39 37456 - 37779 605 107 aa, chain - ## HITS:1 COG:NMB0603 KEGG:ns NR:ns ## COG: NMB0603 COG0140 # Protein_GI_number: 15676507 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Neisseria meningitidis MC58 # 1 107 1 107 107 149 74.0 2e-36 MTDTILTQIQNVIDSRKGGDPDASYVAQLLHKGEDKILKKVIEEAGETLMASKDGGGEHL VYEVADLWFHTMVLLAHHGLRAEDVVNELARRQGLSGLVEKASRKES >gi|241320352|gb|ACQV01000016.1| GENE 40 37812 - 38219 368 135 aa, chain - ## HITS:1 COG:NMA0837 KEGG:ns NR:ns ## COG: NMA0837 COG0139 # Protein_GI_number: 15793807 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Neisseria meningitidis Z2491 # 4 134 1 131 131 219 82.0 7e-58 MSNINETLLNAVKFDEKGLVCAIAQDWQTRRVLMVAWMNAEALQKTIETGFAHYYSRSRQ KQWMKGEASGHRQKVHELRLDCDGDAVVMLIEQNGGIACHTGRESCFYKVWQEGAWQTVD AVLKDEEAIYGHKHP >gi|241320352|gb|ACQV01000016.1| GENE 41 38264 - 39031 1028 255 aa, chain - ## HITS:1 COG:NMA0838 KEGG:ns NR:ns ## COG: NMA0838 COG0107 # Protein_GI_number: 15793808 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 255 1 255 255 429 89.0 1e-120 MALSKRIIPCLDVKDGRVVKGVNFLGLRDAGNPVDVAKRYNDEGADELTFLDITASSDNR DTILHVIEAVASQVFIPLTVGGGVRTVADIRRLLNAGADKASINTAAVTNPDLVNEAAGF FGSQAIVVAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEWAVEMQRRGAGEILLTSMDRD GTKQGFNLPLTRAVSEAVDIPVIASGGVGSVQHLVDGIKEGKADAVLAASIFHFGEASIR EAKLAMREAGIEVRL >gi|241320352|gb|ACQV01000016.1| GENE 42 39072 - 39389 327 105 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759361|ref|ZP_04757467.1| ## NR: gi|241759361|ref|ZP_04757467.1| hypothetical protein NEIFL0001_1772 [Neisseria flavescens SK114] # 1 105 1 105 105 168 100.0 9e-41 MLEAFVLGFWIIWSSDREVYPLSESLWFTLIAVILRQLTAFDLPIIDTYWMIFNGIVWAF AGLIFSIVGRIDSNFIISCILAMIAGIGYFQLLQHLPDWLSKFLA >gi|241320352|gb|ACQV01000016.1| GENE 43 39567 - 40304 1033 245 aa, chain - ## HITS:1 COG:NMB0629 KEGG:ns NR:ns ## COG: NMB0629 COG0106 # Protein_GI_number: 15676531 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Neisseria meningitidis MC58 # 1 244 1 244 245 419 88.0 1e-117 MLLIPAIDLKEGRCVRLKQGLMEQATVFSDSPAEMALHWRNQGARRLHLVDLNGAFAGVP QNFPAIKEILAAVAKDIPVQLGGGIRDLGTIEKYLDLGLTDVIIGTAAVKNPEFVREACK AFPGQIIVGLDAKDGMVAIDGWATVTEHYVVDLAKRFEDDGVNSIIYTDIGRDGMMSGVN IEATVKLAQSVNIPIIASGGLTNLDDIHALCAVEKEGVNGAITGRAIYEGSIDFAQAQKL ADSLA >gi|241320352|gb|ACQV01000016.1| GENE 44 40379 - 41023 287 214 aa, chain - ## HITS:1 COG:NMB0630 KEGG:ns NR:ns ## COG: NMB0630 COG0118 # Protein_GI_number: 15676532 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 212 1 212 212 339 73.0 2e-93 MKVAIVDYGMGNLHSVLKSVQAAQVLSNQNAEVYLTSWPEEVMAADKVIFPGQGAMPDCM SALKASGLGEAVSDGLKNKPFFGICVGAQLLFEHSEEGDTDGLGWFEGQVKRFLPNQTDA QGGRLKVPHMGWNTVRQTRPHPLFQDIGQNEYFYFVHSYYFAPKNEEVVLGVSEYPNEFA CIVGKDNVFATQFHTEKSHQAGLLLLRNFLNWQI >gi|241320352|gb|ACQV01000016.1| GENE 45 41193 - 42149 1245 318 aa, chain - ## HITS:1 COG:NMA1772 KEGG:ns NR:ns ## COG: NMA1772 COG0131 # Protein_GI_number: 15794665 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 304 3 304 305 434 72.0 1e-121 MNKAQLHLTNFLLLVEEAGSLTKLARACGYENSASLSQLKRRLEQQAGDESARGIRPSLA AKLESGMRKRKGWLNRDHSKDQEKAAAVEAARLEKQTVEAAEAGVSTEGRFVTVTRNTCE TQITVSLNLDGTGKYRLDTGVPFLEHMLAQVARHGLIDLDITCKGDLHIDDHHTVEDIGI VLGQALKQALGNKVGITRYGHAYVPLDEALSRVVIDLSGRPGLVYNIDFTRALIGRFDVD LFEEFFHGLVNHSMMTLHIDNLSGRNAHHQAETVFKAFGRALRMAVEYDSRMMGQTPSTK GTLSEESVQEEAEAASEE >gi|241320352|gb|ACQV01000016.1| GENE 46 42169 - 43254 746 361 aa, chain - ## HITS:1 COG:NMA1771 KEGG:ns NR:ns ## COG: NMA1771 COG0079 # Protein_GI_number: 15794664 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 358 1 358 365 521 69.0 1e-148 MNRVADVIRDDIKVMTAYQVADLPEGFMKLDAMECPHHPFAGYESLLSEWADLAKQAPIH LYPHAAKSGIYEELREVFGIPDKAEIALGNGSDELIQFLTMLVAKPNARVLGIEPSFVMY RHNAALYGMEYVGVPLNPDFSLNLPAVLTAIEQHQPSLIFIAYPNNPTGVCFKREEVEAI IRAATGIVVVDEAYGAFHHDSFLPWAGEVENLVVMRTISKIGFAGLRMGYAAASPSIIGE LAKILPPYNMNQLSLAAAKFSLKHHQIIQQNIDTLKNERSRVMNELLKLNRLQVFPSEAN FITVRVPDANELFETLKQNRILIKKLHGSHPLLKQCVRITIGSAAQNDAVLAVIKNLYPN L >gi|241320352|gb|ACQV01000016.1| GENE 47 43473 - 43829 358 118 aa, chain + ## HITS:1 COG:NMB0597 KEGG:ns NR:ns ## COG: NMB0597 COG3308 # Protein_GI_number: 15676502 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 10 117 7 114 117 139 72.0 2e-33 MNNTRSPLPYLATSVSLILLILLSLSWELWIAPLREGGSWLALKALPLCLPLTGILKKRI YTYQYSSMLILIYFAESCMRLADTTVASRICAAVSVLLCITFFLGCLAFIKQQKHTSK >gi|241320352|gb|ACQV01000016.1| GENE 48 43826 - 45658 1800 610 aa, chain + ## HITS:1 COG:NMB0596 KEGG:ns NR:ns ## COG: NMB0596 COG3307 # Protein_GI_number: 15676501 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Neisseria meningitidis MC58 # 25 607 24 603 604 574 52.0 1e-163 MTYHTLSDGLTESSVKTFWPLWLSFLWICAVPFLSLYRVGPLPSFYLEAISLSGSLVLTL ISAHKGLLNIRLPALSIGLFAMAAFWSLQARLMHSTYPGMSDITAWTFVILALGAWSVRG WIAAYGQERVVSIFAWSLLIGATIQAVIVWLQFKGWSNVEWLNGIIARSSGTVNGQLGQR NHLGHYLMWGILAASYLWTVRKMSNAAGFLFVLALTATLGLVNSRTILGYIAALFLITPL WFWRTRFQHKRALCIFLLTAILAAAFQFGMGSLLDLFGNIKYETAVERAGTSGFEGSMRQ IEWSKAWIAFQSAPWFGHGWNSFAQQTFLINAQQQYFPNNILGVLFTHSHNIVMQLLSEM GIAGTLLATLTLLAAVWRLLGRNQTPASLFLLTAAAVSLCHSMLEYPLWYIYFLTVFSLI LSLTPSYPKDVSDGPLSTRIRQWAGGIAALSILIGMANLSWEYQNLTQYSRVGETDNPQT VQNKIDGLQQLSKESPMLAYYADLSLSKRADPTDAYIRPWAEEAALKALTYRPYSSAYQV GLYLYRQGKKEEGAQWMQAVQYYYPYMMYFYADKIRSHPVFAPLLPKLLSDCKDFINAPK HQTAKSCDKP >gi|241320352|gb|ACQV01000016.1| GENE 49 45866 - 46543 1184 225 aa, chain + ## HITS:1 COG:NMA0798 KEGG:ns NR:ns ## COG: NMA0798 COG0745 # Protein_GI_number: 15793772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 1 225 1 225 225 385 95.0 1e-107 MSRVLLVDDDALLTELLTEYLTAEGLNVHSVPDGEAGVQEILTGQYDVIVLDSMMPKMNG LDVLKNVRIQSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKPCTPRELLARINAILRRAQ HSNEQNNAPNSISVSDVILYPAKRQASIKDIPLELTSTEFNLLEVLMRHAGQVVSKETLS IEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGLGYLFVKN >gi|241320352|gb|ACQV01000016.1| GENE 50 46559 - 47956 1549 465 aa, chain + ## HITS:1 COG:NMB0594 KEGG:ns NR:ns ## COG: NMB0594 COG0642 # Protein_GI_number: 15676499 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis MC58 # 1 464 1 464 468 816 84.0 0 MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTIETTLMSSIVSAFNSRG DSGAREILSEWKNNPVSNAVYVITGDDKKDILGRDIDSLSIERARIFAINNPESDLAHIE YDRFGEEYLFFIKGWDNHQAQRLPSPLFIPGLPLSPIWHEFIILSFIIVVGLLMAYILAN NITKPIKILGGGMDRVANGELETRISQQVDDRDDELSHLAVQFDKMAEKLEKLVAKERHL LHHVSHEMRSPLARMQAIVGLIQSQPQKQEQYLKRLEGELVRMDTLVGELLTLSRLETSN IPLEKENLKLVPFLTNLIEDNQSIAHQNNQSVTLSIDPKIPENAVVSANEGYLYRAFDNV IRNAINYSPEGSTIQTHIGQDGKNWIIDVTDNGPGVDEMQLPHIFTAFYRADSSVHKPGT GLGLALTQHIMKQHCGKIIAENVKPNGLRMRFILPKKKAGDKKEV >gi|241320352|gb|ACQV01000016.1| GENE 51 48013 - 50403 2409 796 aa, chain + ## HITS:1 COG:NMB0593_1 KEGG:ns NR:ns ## COG: NMB0593_1 COG1042 # Protein_GI_number: 15676498 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Neisseria meningitidis MC58 # 1 619 1 620 620 627 57.0 1e-179 MSATVQTGYFFMPEHIILVGASERPHSLGERIFSHLLGSSYQGKITPVNLRHSSVAGIPS YSSLSKIPGQADLVVAVIPPDHYDSLFKACRKKDLRHIILIQDWENLPPESCKNARSIIQ KHHGDELNITVCNSAGIQLPSLNLNIGTQTDYPAGHIALLTGHSTISRDINHLLNTLHQG VSRHISLNYDLSPTTSADWLNRFGHNRHTKVAVIHYNPAENQRELFSAIRHFTRHTPLIL LSTHHTDDTDKAILRSLSRHCNFQPLFNNAELEAALKAHLSGIPVITNPTILSDTPIEWL RTTANACELTLDLPTDVPSIRQGCIGSNPTPARIHRLALEQLQNPHTQALLGIISPDTPD AYSIHQTLDNLAQKTSKPILVSYRFSDGLTRFNTPEEALLTLYFRNQTAYLQQVQNTPAP AKTGRLKTPKSKSIDKAIASGQTELMAEALYLPPCQTQKHNAVQFRFSRHAIYGNILTAH YNGQTEAALPPFTTLDIQRLSQFVELDNTSVLNQFLHSLNTLIHNNQHIGDIILNYNGSQ YSSTIIPEIVEKPAAPTTKIPKKAVQTLEQAAAKMQSAAAYLQQKNPAAAEFLRNTGEAA SELLHPKTETPKIQNVLAPYPSQTDTFTLPDGNTLHIRALEPEDAEAKQKFVRQLPVADR YTRFMTHTNELPLPTLARLTRPDFHTECAWAAFASDGRIVAVSRYSRINRNECEFGITLA PEARKTGLAGKMMSLIIQTATQQGYQTMNAEILKENTPMLKLAEKSGFTVTPSETDRGLY QASLDLNEWQNSNKNK >gi|241320352|gb|ACQV01000016.1| GENE 52 50479 - 50727 418 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225373729|ref|ZP_03750950.1| hypothetical protein NEISUBOT_02020 [Neisseria subflava NJ9703] # 1 82 1 82 82 165 100 9e-40 MVVIRLARGGSKHRPFFNVVVTDSRNRRDGRFIERVGFYNPVANEKQERVRFDADRINHW VAQGAKVSDAVAKLIKEQKIAA >gi|241320352|gb|ACQV01000016.1| GENE 53 50743 - 51252 175 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 7 164 4 160 179 72 26 1e-11 MTDTQKRVAMGYIKGVFGIKGWLKIAANTEYTDSLLDYPEWQLCKDGKTLNVVLEAGKIV NGELQVKFEGIDDRDQAFALRGYTIEIPRESFAPTEEDEYYWADLVGMTVINKENIVLGK VSNLMETGANDVLMIKGEHGQILIPFVSNYIESVDTDSKTIITDWGLDY >gi|241320352|gb|ACQV01000016.1| GENE 54 51252 - 52001 485 249 aa, chain + ## HITS:1 COG:NMA0793 KEGG:ns NR:ns ## COG: NMA0793 COG0336 # Protein_GI_number: 15793767 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Neisseria meningitidis Z2491 # 1 249 1 249 249 436 87.0 1e-122 MLIQAITIFPEMFDSIVEYGVTGRARKQNLWQFQAINPRKFADNKLGYIDDRPFGGGPGM IMMAPPLQAAIEEAKANSQKPAKVIYLSPQGQPLTHKKAAELAELPHLILLCGRYEGIDE RLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVLGDIQSAEQDSFSDGLLDCPH YTKPVEFQGMMVPDVLRSGNHGLIAEWRLKQSLRRTLERRPDLLEKRSLIPKESRLLKEI LQEQQEIQS >gi|241320352|gb|ACQV01000016.1| GENE 55 52016 - 52381 595 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075461|ref|ZP_03718660.1| hypothetical protein NEIFLAOT_00466 [Neisseria flavescens NRL30031/H210] # 1 121 1 121 121 233 100 3e-60 MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGSRSRLQAYEGVVIARRNRGLNSN FIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYLRGLTGKAARIKEKLPARK G >gi|241320352|gb|ACQV01000016.1| GENE 56 52593 - 54002 1487 469 aa, chain - ## HITS:1 COG:NMA1975 KEGG:ns NR:ns ## COG: NMA1975 COG3182 # Protein_GI_number: 15794858 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Neisseria meningitidis Z2491 # 1 469 1 469 469 793 84.0 0 METKPTSQNEQRANRRYLTVWRWHFYAGLLVAPFLTLLAVTGLGMLLFANITGKEGERIH ITPQAVVQPLSAQAEAARQFVNPETASVVQYIAPRADDMVAVFRVNNDDKATMVAVDPYT AKVVNTMPRGQGWYHTMDEIHGDMMIGPVGDYLLETTASLTILMIITGIYLWWAKQRSLK SMLVPKAGKGRTWWRSMHGAFGTWVSLILLLFCLSGIAWAGIWGGKVVQAWSQFPAGKWG VEPNPVSSVPTHGDVLNDGKSKEVPWILELTPMPVSGTTMGENGINPSEPMTLETVDRFA REIGFKGRYQLNLPKGETGVWTLSQDSMSYDMISPTADRTVHIDQYSGKILADIHFDDYN WFGKFMAASIALHMGTLGWWSVLANVLFCLAIIFICVSGCVMWWKRRPSEARGLVPPAQK IKLPVWWAMAVPLLILAVIFPTAIAAIAVIWILDTLLLSRIPALARWFK >gi|241320352|gb|ACQV01000016.1| GENE 57 54347 - 54823 868 158 aa, chain + ## HITS:1 COG:NMA1643 KEGG:ns NR:ns ## COG: NMA1643 COG0782 # Protein_GI_number: 15794537 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 158 1 158 158 240 93.0 8e-64 MQKIPLTVRGAELLKQELQHLKSVARPEVIEAIAEARSHGDLSENAEYEAAKERQGFIEG RIAELEHKLSMAHIINPAEIHAEGKIVFGTTVTLEDLETEEQVTYQIVGEDEADIKERKI YVGSPIARALIGKEEGDVAEVQAPGGVREYDIIAVQYI >gi|241320352|gb|ACQV01000016.1| GENE 58 54919 - 55347 262 142 aa, chain + ## HITS:1 COG:no KEGG:NMB1284 NR:ns ## KEGG: NMB1284 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 137 2 139 146 113 50.0 3e-24 MNLLYKIIQTAAAMWLGMQLTAGYVTAPILFRLLPKMQAGEIAGISFAITALCGLVIFGA AYAFFRRQLASLSWWILVLWLLLACNHLLVTPVIEAHKYGLDNWLLSLVGGTFGVWHGLS SIIFLICTILAAICVWKWPKPN >gi|241320352|gb|ACQV01000016.1| GENE 59 55482 - 56243 1092 253 aa, chain - ## HITS:1 COG:NMB0382 KEGG:ns NR:ns ## COG: NMB0382 COG2885 # Protein_GI_number: 15676296 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Neisseria meningitidis MC58 # 1 224 1 237 242 315 74.0 7e-86 MTKQLKLSALFVALVASGTAMASEAHTKHGYTVSSQSQEIVRNNYGECWKNSYFDKATQG RVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSNKNVE TVRVEGHTDFMGSEQYNQALSERRANVVANYLVGRGVASSKISAVGLGESQARMTATCEA EVAKLGKKVSKAKKRAALIACIEPDRRVDVKIRSIVTRQVAPGQTIEGQGELPASDEGWI PAPYNGVHGYAKP >gi|241320352|gb|ACQV01000016.1| GENE 60 56686 - 57636 860 316 aa, chain + ## HITS:1 COG:NMB0381 KEGG:ns NR:ns ## COG: NMB0381 COG0583 # Protein_GI_number: 15676295 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 316 1 316 316 561 86.0 1e-160 MKLQQLRYALEVYRHNLNVSEAADALFTSQPGISKQIRLLEEELGIQIFIRSGKRVVSVS QPGKAVLEISERILRDVQNIKNIGSEFTDHDSGSLTIATTHTQARYALPKIVAEFVKNYP KVNLTIKQGSPSAIAQMVSSGEADLAIITERIDDHPELGKLPCYEWNHAVIVPHDHPLLD CRNPLSLEDLASFPLVTYEFAFNSGSSIARTFNKAHIEQPDVALSAADTDVLKTYVRLGL GVGLMAKMAYDPIVDQDLQLIDAAHLFEPSPTWIALRTDTYLRGYAYDFIQMFAPKLTRE VVDRILYTPVVEDFSI >gi|241320352|gb|ACQV01000016.1| GENE 61 57723 - 58430 634 235 aa, chain - ## HITS:1 COG:NMA2107 KEGG:ns NR:ns ## COG: NMA2107 COG0664 # Protein_GI_number: 15794981 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Neisseria meningitidis Z2491 # 1 235 10 244 244 430 92.0 1e-120 MKTLCSTCSLRELCLPVGLMPNEFSQLDAVIRQSRRLKKGEYLFRAGEPFTSLFAIRAGF FKTTVASQDGRDQVTGFFMSGELVGMDGICSHIHSCDAVALEDSEVCELPFTHIEELGQD IPSLRSHFFRLMSREIVRDQGVMLLLGNMRAEERLAAFLLNLSQRLYSRGFAANDFILRM SREEIGSYLGLKLETVSRTLSKFHHEGLISVEHKHIKILDATTLKKMVSGCSHAI >gi|241320352|gb|ACQV01000016.1| GENE 62 58619 - 60040 1745 473 aa, chain + ## HITS:1 COG:NMA2108 KEGG:ns NR:ns ## COG: NMA2108 COG0635 # Protein_GI_number: 15794982 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 473 1 473 473 872 88.0 0 MKIIPISNNTNTNNELPEFDRELIASLPSSGPRYTSYPTADRFHEGFKEAEYIQALSLRN TGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMELLAPHLGGRHQ LAQLHFGGGTPTFLSDDQLERVFDMIRKYFQLIPNGEYSIEIDPRKVSRETVLKLGKLGF NRMSVGIQDFDPKVQEAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQNTESIKT TIDTVLSLDPDRLALYHYAHLPHIFKPQRRIDTNVVPGSEEKLDMLQYCVQTLTERGYVF IGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIGSTYSQNERDID AYYAALDAGHLPIMRGYQLNQDDILRRNIIQDLMCRFSLDYQIYESVFGIPFSRHFAAEL EDMKQLETLGLVRLKPNSLTVTPKGRFLIRNIAMVFDYHLRHKETKAKYSQTV >gi|241320352|gb|ACQV01000016.1| GENE 63 60172 - 60504 330 110 aa, chain + ## HITS:1 COG:no KEGG:DP2299 NR:ns ## KEGG: DP2299 # Name: not_defined # Def: hypothetical protein # Organism: D.psychrophila # Pathway: not_defined # 8 109 9 110 110 86 50.0 3e-16 MITEQQNDILSINQVQLLLAEKRTALAIMRTGIAVFALPLSIFSALIATSKWYEAVDVWP LLALVSLMNISLIIFSIYLITRSLRRMHQYDRMIADIKYNNQSLRKLIKS >gi|241320352|gb|ACQV01000016.1| GENE 64 60808 - 61053 318 81 aa, chain + ## HITS:1 COG:ECs2358 KEGG:ns NR:ns ## COG: ECs2358 COG3313 # Protein_GI_number: 15831611 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli O157:H7 # 2 76 49 121 125 75 41.0 3e-14 MEQPDFFPIPSPCIGVCEANAKGYCKGCLRSREERLYWLQMTDSQKHQVMHLLSLRKAKI RNRKLEKPETGEHPVQNLLDF >gi|241320352|gb|ACQV01000016.1| GENE 65 61092 - 61859 685 255 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759263|ref|ZP_04757369.1| ## NR: gi|241759263|ref|ZP_04757369.1| GumN family protein [Neisseria flavescens SK114] # 1 255 1 255 255 476 100.0 1e-133 MKKLLACLLVPLTALALGACKPAATSTDNKPAELNWQQPKLTSNVWKISKEGQPNSYLLG TIHMGQTNQTLSSDAVKLLQSTDQLTTEVDPLPDSSPETKKMYQKYFKEVMSTEPLSRKL GKTDFRLLQEIYSQNEESQPIAQMADKLHPWAAFIFAGSTFPKGYSSETGADMLLTNAAV GINKPRGSLESLDDVTAIFKAQPEETMLNFLKASIKTNKEETEDVKKLHQAYSDGRFEEL IPLVGRNRTTHPQTC >gi|241320352|gb|ACQV01000016.1| GENE 66 61762 - 62079 349 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225075369|ref|ZP_03718568.1| ## NR: gi|225075369|ref|ZP_03718568.1| hypothetical protein NEIFLAOT_00374 [Neisseria flavescens NRL30031/H210] # 20 105 243 328 328 159 98.0 6e-38 MSKNSIKPIQTAALKNSSHLLEETEQRTLKLVDTKYAKAMSNWLKNDLLIRRNLAWLPEI RKQSAKQSTLFAVGIAHLPSEKGLIELLRQEGYQVTPEPKVLIWQ >gi|241320352|gb|ACQV01000016.1| GENE 67 62179 - 63174 1153 331 aa, chain - ## HITS:1 COG:NMB1573 KEGG:ns NR:ns ## COG: NMB1573 COG0078 # Protein_GI_number: 15677423 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Neisseria meningitidis MC58 # 1 331 1 331 331 588 90.0 1e-168 MSLKNRHFLKLLDFTPEEITTYLDLAAELKAAKKAGREVQRMKGKNIALIFEKTSTRTRC AFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDVVEELAKYA GVPVFNGLTNEFHPTQMLADALTMREHSDKPLNQIAFAYVGDARYNMANSLLVLAAKLGM DVRIGAPKSLWPSENIIETVQAVAKETGGRILLTENVKEAVKGVDFIHTDVWVSMGEPKE AWQERIDLLKGYRVTPELMAAAENPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTE EVFESEASIVFDQAENRMHTIKAVMVSALGD >gi|241320352|gb|ACQV01000016.1| GENE 68 63318 - 64073 663 251 aa, chain - ## HITS:1 COG:NMB1528 KEGG:ns NR:ns ## COG: NMB1528 COG0350 # Protein_GI_number: 15677380 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Neisseria meningitidis MC58 # 1 251 20 269 269 407 81.0 1e-114 MITLPFLNNLPSKWNEIREQLETDFSVDLEALLHERLTEHEAKQFEQDFIDCIGCTPEEY VRIRRAIRLLETRYPDSPNELTVAAVATPLGEMLAVFGSKGLCLLEFVGQKHMEQEIMAV QKALRGQFIFQENEQTQLLRQELDLYFQGRLKVFATPLETIGTAFQQQVWDALLTIPYGE TRSYKEQAQQLGNPKAIRAVAAANGQNKVSILIPCHRVIGSDGKLTGYAGGLNRKQSLLA LERGEVQTALF >gi|241320352|gb|ACQV01000016.1| GENE 69 64242 - 64598 100 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759312|ref|ZP_04757418.1| ## NR: gi|241759312|ref|ZP_04757418.1| putative lipoprotein [Neisseria flavescens SK114] # 1 118 44 161 161 241 99.0 1e-62 MGLWHIDELPMDTPQNAYYLSRVETAGSDNRIYGTHIEFDKDGRFSSSYSAECGNEYFPH SEGLYRFVSDDEVILQATKVEQRGYCGENGEFKKSGEWVLGKFKIEKDKEFVVLKKIL >gi|241320352|gb|ACQV01000016.1| GENE 70 64836 - 65969 1385 377 aa, chain - ## HITS:1 COG:NMA1730 KEGG:ns NR:ns ## COG: NMA1730 COG0624 # Protein_GI_number: 15794623 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Neisseria meningitidis Z2491 # 1 376 1 376 381 729 92.0 0 MTETQSLELAKELISRPSVTPDDQNCQQLLAERLQKIGFAVEELHFGDTKNVWLRRGAQA PVFCFAGHTDVVPAGPVRKWDSSPFEPTEREGRLYGRGAADMKTSIACFVTACERFAAEN PDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYCIVGEPTAVDKLGDMLKNGRR GSLSGNLTVKGKQGHIAYPHLAINPVHTFSPALLELTQEVWDEGNEYFPPTSFQISNING GTGATNVIPGELNVKFNFRFSTQSTEEGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAG KLTDVAREAIAEICGVEAELSTTGGTSDGRFIKAIAKELIELGPSNATIHQINENVRLDD IPKLSAVYEGMLKRLLK >gi|241320352|gb|ACQV01000016.1| GENE 71 66081 - 66701 662 206 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1439 NR:ns ## KEGG: NMCC_1439 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 206 1 206 206 377 94.0 1e-103 MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQVWQQLIQQVAAELGAPFAPP HIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSVSLDWHCYKADVSPIALPD YNRWLDNFDTEKYASFDMWHGAESEYDDYRIVAQQSDGDRKLRDDKDFFCIGKHIERDDL GKQDVAKWIVETVEELLPLYEACHGK >gi|241320352|gb|ACQV01000016.1| GENE 72 66736 - 67245 788 169 aa, chain - ## HITS:1 COG:no KEGG:NMA1732 NR:ns ## KEGG: NMA1732 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 169 1 169 169 325 95.0 4e-88 MNPFETKSVTFAEPIEMLYACHGKVRRFCNQVAMLSDYIAENGCNQIVLQTIRQIAQYFN VAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLHGNWDGVAAEFAKLEADNAYI PDAEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIGEIMAARRRK >gi|241320352|gb|ACQV01000016.1| GENE 73 67331 - 67909 1005 192 aa, chain - ## HITS:1 COG:NMA1733 KEGG:ns NR:ns ## COG: NMA1733 COG3241 # Protein_GI_number: 15794626 # Func_class: C Energy production and conversion # Function: Azurin # Organism: Neisseria meningitidis Z2491 # 1 192 1 183 183 246 84.0 2e-65 MKAYLALISAAVIGLAACSQEAAKPAEAPAASAASEAAPAETTAPADAAPASEAAPADAA AAPAAGNCATTVEANDAMQFNTKEIQVSKACKEFTITLKHTGTQPKTSMGHNIVIGKAED MDGIFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADGEYKFACTFPGH GALMNGKVTLVD >gi|241320352|gb|ACQV01000016.1| GENE 74 68201 - 68623 406 140 aa, chain - ## HITS:1 COG:no KEGG:NGK_0793 NR:ns ## KEGG: NGK_0793 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 138 1 138 140 173 71.0 2e-42 MDLAQLGKRDHLLAGLLQQSQQWRKLDAKIKTVLPANLHPHFQIACVEDGRLVLLAANNM AASRLKMILPAMLPKLQTLHAGVREVVVRVVPKPPTQPKTNSLRLSEAALDSFDEAAAKL EGKHPELAAALAELVRKHSR >gi|241320352|gb|ACQV01000016.1| GENE 75 68778 - 71531 4521 917 aa, chain + ## HITS:1 COG:NMA1735 KEGG:ns NR:ns ## COG: NMA1735 COG0653 # Protein_GI_number: 15794628 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Neisseria meningitidis Z2491 # 1 916 1 915 916 1597 88.0 0 MLTNIAKKIFGSRNDRLLKQYRKSVAKINALEKQMQALSDAELQAKTAEFKQRLADGQSL DDILVEAFAVCREASSRVLGMRHFDVQLIGGMVLHNGKIAEMRTGEGKTLVATLAVYLNA LSGKGVHVVTVNDYLASRDASIMEPLYNFLGLSVGVIVADLQPFERQTAYGADITYGTNN EFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDEARTPLIISGQADDNIQLYRVMN SIPAHLIRQETEEGEGDYWVDEKAHQVILSEAGHEHAEQILTQMGLLQENDSLYSAANIS LMHHLMAALRAHTLFHKDQHYVIQDGEIVIVDEFTGRLMAGRRWSEGLHQAVEAKEGVEI KRENQTLASITFQNYFRLYNKLSGMTGTADTEAFEFQSIYNLETVIIPTNRPVQRKDFND QIFRSAEEKFEAVVKDIAECHKNGQPVLVGTTSIENSELVSRLLHEAGLPHNVLNAKEHE REALIVAQAGKVGAITVATNMAGRGTDIVLGGNLKHQIEAIRADETLSEQQKQAQISALE SGWQAEHDQVVAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSFEDPLLRLF ALDRAAAILNRLAPERGVAIEHGLLTRQIEGAQRKVEGRNFDMRKQVLEYDDVANDQRKV IYHQRNEILTSKDVSDLTREIRADVISDLVDYHIPPDSMEEQWAIPALEHQLAADFRLHV DIKGWLKEDSTLDNQDIKERLIKRIEDEYAEKVELVGKQAMSDFERNVMLQVIDNQWREH LAAMDYLRQGIHLRSYAQKNPKQEYKREAFAMFENLWRSIKQNIAALLTAVQIERNSEYD HTAAQSVSDVQTVHSDAPDMEELLGQSQTDLVTEAFDPDGTDFSPEALAQNGLIVHRNDP CPCGSGLKYKQCHGKLN >gi|241320352|gb|ACQV01000016.1| GENE 76 71664 - 72764 1335 366 aa, chain + ## HITS:1 COG:NMA1939 KEGG:ns NR:ns ## COG: NMA1939 COG0082 # Protein_GI_number: 15794822 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Neisseria meningitidis Z2491 # 1 361 1 361 366 682 96.0 0 MAGNTFGQIFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQYDLDRRKPGTSRHVTQRR EADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSFRPGHADYTYWHKYGTRDY RGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQVGEKEIQFEGYEYISQNPFFA ANQSQIEDLENYMDSVRKSLDSVGAKLHIEAANVPVGLGEPVFDRLDAEIAYAMMGINAV KGVEIGAGFDSITQRGSEHGDELTPQGFLSNHSGGILGGISTGQDIHVNIAIKPTSSIAT PRRSINIEGNPVELATHGRHDPCVGLRAAPIAEAMLALVLIDHALRHRAQNADVQVNTPD IAKLGK >gi|241320352|gb|ACQV01000016.1| GENE 77 72882 - 73319 729 145 aa, chain + ## HITS:1 COG:no KEGG:NGK_1557 NR:ns ## KEGG: NGK_1557 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 112 1 112 141 188 90.0 5e-47 MAQETALGAALKSAVQTMSKKKQTDMIADHIYGKYDVFKRFKPLAVGIDQDLVAALPQYD PTLIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVSAEEQTIAQQHPAVQQALAAQA ERQAAKATTEAEAAPAQAEINEAAE >gi|241320352|gb|ACQV01000016.1| GENE 78 73667 - 75241 1918 524 aa, chain - ## HITS:1 COG:NMA2109 KEGG:ns NR:ns ## COG: NMA2109 COG0306 # Protein_GI_number: 15794983 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Neisseria meningitidis Z2491 # 1 524 1 524 524 842 86.0 0 MAQTQSSANLKLINTVFAAMLVSMVGYFIYWGLGYTHYNHSGLFILATFFGVFMAFNVGG NDIANSFGTSVGSGTLTIPQALLIAAVFEVSGAVIAGGEVTDTIRKGIVDLNGMHLDPMQ FVFIMMSALLAAALWLLFASHKGLPVSTTHAIIGGIVGSALCMAALNGVDSVALIQWDKL GEIALSWILSPVLGGIVSYLLFSRIKKNVLDYNSWADNTLKGIKLEKKTYKEEHRLFFEA LSESEKVEYATKMAHDAQIYDEPDFDPEELQSEYYRGLHRFDSRKGEVDSYKALHSWVPF IASVGGMMIAAMLIFKGLKNLHLGMSNVNSFLTIFMIGAAIWMGTFVFAKSLKRKDLDKS TFQMFSWMQVFTACGFAFSHGANDIANAIGPFAAIMDVLRTNSITAQNAVPPIAMLTFGI ALIVGLWFVGKEVIKTVGTSLAEMHPASGFSAELSAAAVVMAASFMGLPVSSTHILVGAV LGIGLVNRNANWKLMKPIGLAWVITLPAAAILSVVSYLILQAVF >gi|241320352|gb|ACQV01000016.1| GENE 79 75395 - 76498 945 367 aa, chain + ## HITS:1 COG:NMB0377 KEGG:ns NR:ns ## COG: NMB0377 COG2377 # Protein_GI_number: 15676291 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Neisseria meningitidis MC58 # 1 365 11 375 376 504 69.0 1e-143 MQPQYYIGIMSGTSMDGADAVLIQMQGKQWQRAVAHSFLPYSDGLRQELLALQNIGENEL HRSNILAQTLSRLYAQTVQQLLAEQNLSAKDIAAIGCHGQTIRHAPEHGYSIQLVNLPLL AELTGIFTVGDFRSRDLACNGQGAPLVPAFHEALFQDANETRAVLNIGGISNISILPPDT PSFGFDTGPGNMLMDAWMQHIWQQPYDKNGEKAAQGEVLPDLLASLLDHPYFSRPYPKST GRELFSLSWLQGRLKGNEKPEDVIRTLVFYTAQTIFDATKQAAPAIHNLYICGGGIRNPV LMQDLETLFSPDTKLHSTAKLHLDPQWVEAAAFAWLAACWCNQVPSNPHHATGAYSHRIL GSGHYGN >gi|241320352|gb|ACQV01000016.1| GENE 80 76562 - 78121 1783 519 aa, chain - ## HITS:1 COG:NMA1694_2 KEGG:ns NR:ns ## COG: NMA1694_2 COG1253 # Protein_GI_number: 15794587 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Neisseria meningitidis Z2491 # 243 518 1 276 276 449 86.0 1e-126 MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVKPSQRDKARITGLGLAVVIR IFMLGFMAHIMTLTRPLFELGGLEISGKDMIMFAGGIFLLYKATTELHERLEGHNQFAVA EGQKKHSAFWGVVAQILILDAVFSIDSVITAVAMVDHIVVAMGAVVVAMTVMISASKPLT AFVDKHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYLYAAIGFSILIELFNQVSQKNAR KNDYISTSWRKRTAENVLGMMGIRESILAKAGDNGGDDEHFEENEKSMIRSVLTLAERPI MGVMIPRREIEKLDISQSREEQNAQLKNTPYSRLLVVGKAGVDEPLGYISKKDLLNQLLE SGEINIQTALRQPLILPDSTTALNAIELFRQSSADYALVVDEFGAVLGMVTMKDLLETIA GEFPEEFEREEEEAAPASQDETLSVDGALEYVELASQLNLPAQEEDADFHTVAGLIMEEL QSIPDVGDFIDYHGWRFEVVEKDGQRIARVKINRLPEEE >gi|241320352|gb|ACQV01000016.1| GENE 81 78382 - 79173 323 263 aa, chain - ## HITS:1 COG:no KEGG:NMO_1315 NR:ns ## KEGG: NMO_1315 # Name: not_defined # Def: putative fimbrial assembly protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 262 2 259 262 351 68.0 2e-95 MENSHTLHSSSRFRFALKNAAWHLLISLILAGLAALLVFGVWYPYPYAELTGGLALYKLV ISVDIVCGPLLTLILASPSKKLKERIVDFSLIGMIQLAALIYGLYSVSLARPVVAAFETD RINVVTAAEIDVNDLSHAPKDLQDLSWFGARRVGLREATGPDEANQSLDLSLKGVEPSMR PSWWLPDSQQEREKIRKAMKPLFVLAKARGMSEESIFKQASLENDGKELYFLPFTSARSK EWVVILNDQADFLGYAPIDGFIK >gi|241320352|gb|ACQV01000016.1| GENE 82 79498 - 80190 203 230 aa, chain - ## HITS:1 COG:NMA1907 KEGG:ns NR:ns ## COG: NMA1907 COG3676 # Protein_GI_number: 15794793 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 150 1 150 151 268 86.0 5e-72 MRRSRLSQYKQNKLIELFIAGVTARTAAQLVSVNKNTSAYYFHRLRVLIFHNSPHLEMFD GEVEVDESYFGGQRKGKRGRGAASKVVVFGLLKRNGKVYTVAVPNTQTATLLPIIREQVK PDSIVYTDCYKSYDVLDVSEFSHFRINHSTHFADRQNHINGIENFWNQAKRHLRKFNGIP KEHFELYLKECEWRFNHGEIKVQISILKQLVKQNLFWLSSTVPKNIFVFI >gi|241320352|gb|ACQV01000016.1| GENE 83 80274 - 80633 578 119 aa, chain - ## HITS:1 COG:NMA2006 KEGG:ns NR:ns ## COG: NMA2006 COG2018 # Protein_GI_number: 15794886 # Func_class: R General function prediction only # Function: Uncharacterized distant relative of homeotic protein bithoraxoid # Organism: Neisseria meningitidis Z2491 # 1 119 1 119 119 159 81.0 1e-39 MQQLLISVLSDLNNTSADITASAVISTDGLPIATMLPSHLNADRVGAMSATLLALGNRSV RELACGELDQVMVKGKNGYILLSQAGEKAVLALMAKESGKLGLILLDAKRAAKQIAEIL >gi|241320352|gb|ACQV01000016.1| GENE 84 80673 - 81314 618 213 aa, chain - ## HITS:1 COG:no KEGG:NMC1670 NR:ns ## KEGG: NMC1670 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 213 1 213 214 328 76.0 8e-89 MEATLSLQANLYPKITPAGAYYAVSSDTPSASRTLLYGLLRAEPSETISSEKILAWADTS DINTALNLLYRLQRLEFLYGDEEISTDDIHLTDEQLPTLLEQLSNSGKALLADENGLYFA NANFHHEAAEELGLLASEVAKMEDNHRLLIRNNLHINNSAWGICDPSGQSELTFFPLYIG MTKLILVIGGMPDLNKEAFVTLVKVLYHRYGSR >gi|241320352|gb|ACQV01000016.1| GENE 85 81316 - 81852 614 178 aa, chain - ## HITS:1 COG:NMA2008 KEGG:ns NR:ns ## COG: NMA2008 COG2229 # Protein_GI_number: 15794888 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 296 82.0 1e-80 MKENKIIFTGPVGVGKTTAISALSDEPPVQTDASASDITLVRKGYTTVAMDYGVIHLDEE TKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNTRSNPLKDLQFFLDAFRELLKKAPLV VGVTKMDIRSLPSVDVYQKYLAQNNFNVPVFEIDARRKDDVRQLVTAMLFSIDPGLEV >gi|241320352|gb|ACQV01000016.1| GENE 86 81863 - 82966 625 367 aa, chain - ## HITS:1 COG:no KEGG:NMB0476 NR:ns ## KEGG: NMB0476 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 365 1 364 365 424 59.0 1e-117 MNNHLPKIKTIRVMLQEMGEQQQAVFRMAFKMHNTTNYVIVSPDSDEKPDLVLVDTDTPA GLEAWKESKKTYPEVPVAMFSSELPTVTTPYLAKPVKFDTLFPVLRSLAQGGNVFEPSEQ QAAEENKRQSNSDGTRKATIRRFNPNKGLLGALKFASQGHQDIAVLHEGKPILIVFPSIQ RVLLTVSANELEKLCKNDNLAVVCKAVPDNPQWKEKAKVTIMSCLWQMAIWTASGRLIYP MTPQTVFTLKRWPNLTRLAHVPESMRLSAFLTKTSVNLNILYKVMPLEMPDILNYLSATY MTGFLATDTEFATDANNTPSLNEQIDVNSKDVPETAMSKEAQKIAGPSKEQPRGLLQRLM RKLLGKS >gi|241320352|gb|ACQV01000016.1| GENE 87 82990 - 84465 1336 491 aa, chain - ## HITS:1 COG:no KEGG:NMA2010 NR:ns ## KEGG: NMA2010 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 28 491 1 457 463 466 53.0 1e-130 MQFAAQDREVFLNYQLLTIFLLVLFLLVLVFVRHKQSNNSDKQSAHASKSGRTSAAHTAS SEDGNDWIEKVNQTVSNADNQDWEWGGSGSNDATASVSAQEVDPLTEYQVYKQFGYESKA AESLAGYLNTLEDGAPEKLVHELIGLNLRVGNIDMLADTLERHSASLSEDSVAEYLKAGL ALDSTNLRLRVFAEHHLGWNMQEVDRQIGEQSGLEVASDEHIAFENDSVERIVVPGMGKR APIVLGKKDFGEISPEEMGAVIGFAKPERSAKILKDKISYETALHQYNKAIQTSAKPAGL IIDALRLDYQNEEVGQFAKHLWKLYHSLGQYGRQVKERMLGWGYNLGYHEIFDDLEKGPS EQQIKEIGLKRGYIQPSSLQMKAKYRELVQKDSSVISASSSPADEALKEVESLLAYGQLD LAIGTLEQAVLQYPQESQLYIILFDLYERVEDWGRLEQFLRLLRERVVSLPEEVVLAMSR LLQRMNQYSKK >gi|241320352|gb|ACQV01000016.1| GENE 88 84590 - 85873 365 427 aa, chain - ## HITS:1 COG:RSc1209 KEGG:ns NR:ns ## COG: RSc1209 COG2265 # Protein_GI_number: 17545928 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Ralstonia solanacearum # 1 426 12 448 450 364 42.0 1e-100 MDYEGRGVARVDGKTVFIGGALPGERVTFVRHKEKKQFAEAQVEKVLKASSERVEPACCY FDTCGGCSLQHVSFGAQVALKQRILEEQLERIGKVKPEIILPPLYGYSWYYRDRARLSVS VDKQGRLKLGFQAKKSHDVVNIRHCHILPKHVSDRLPDVRNLLQKLHDDGVKVKFVEFYC GKNVTVLNIRFVNQPFEQILSELCNWFDKILSGAEKAWQIWLQDHAESLPFYPENAPTLN YTFAQFDVEMPYKPGDFTQINAQLNEVMVARAVRLLNPQKGERIADLFCGLGNFSVPLAK SGASVVGIEGADYLVDRARENARLNRCAENMTFSVADLFDTDEKTVESWGRFDKMLLDPP RNGAYAVVKSLHKPFLPQKIVYVSCNPSTFARDAGVLVDKGYKFKAAGIMNMFAQTSHVE SIGVFEL >gi|241320352|gb|ACQV01000016.1| GENE 89 86055 - 87116 1226 353 aa, chain + ## HITS:1 COG:NMB0471 KEGG:ns NR:ns ## COG: NMB0471 COG1376 # Protein_GI_number: 15676382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 353 15 344 358 384 62.0 1e-106 MKKILFGLTAALLTSAAAANTLIPDVSPASSGQHVVINITQQRLFLYDNGKLSKIYPVAV GKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKERNDGVKSVPAGPNNPLGPVFVRLGDPKL SLGIHGTNAPASVPGVRSHGCVRMKSPDALEFAKTIATGSPASVIYQMASLNEDANQNLW LAAYRDPYDKKNLDTAALKKSIAAWAKAHGKTIPAARVDAILKGRTGAANCLTCAKGVKL KSPLKSLAWTSGTDAYSKPKVMPKPAPAKDVVLPQGTEIEVDATDDTNKAASEPKQSVRP TPVKPAKPAAKPVTTPADAPASAPKAASEPATAPASSPVKDAPASSEPTDLLF >gi|241320352|gb|ACQV01000016.1| GENE 90 87212 - 87871 586 219 aa, chain - ## HITS:1 COG:NMA0702 KEGG:ns NR:ns ## COG: NMA0702 COG0603 # Protein_GI_number: 15793681 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 219 414 91.0 1e-116 MEKQQALVIFSGGQDSTTCLIQAIQTYGCENVQAITFQYGQRHAIELEQARWIAQDLGVK QTVLDLSLMQQITHNALMDDTAYIETAPDGLPNTFVDGRNALFLLYAAIYAKGQRIRHII AGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWALADEMGALDY ICEHTHTCYNGVVGGCHECPSCILRERGLSEYLESKKVV >gi|241320352|gb|ACQV01000016.1| GENE 91 87992 - 88591 617 199 aa, chain + ## HITS:1 COG:PM2000 KEGG:ns NR:ns ## COG: PM2000 COG0558 # Protein_GI_number: 15603865 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Pasteurella multocida # 1 196 1 196 218 238 62.0 4e-63 MSIYALKPKFQNLLHPIVKRLYQKGITANQVTLFACAVSILIGLLLALFAGVSTLFWLLP IWLFVRMALNAMDGMLAREFGQQSALGGYLNEITDIVADAALYLPFAFIAPFGGVQIALF IWLAAMTEFCGVLGQVHGNGRRYDGPFGKSDRAFFIGALAVWYAIDGSFHSTFYILMWLA YAALVYTCYKRVINGLKAV >gi|241320352|gb|ACQV01000016.1| GENE 92 88732 - 90594 1897 620 aa, chain - ## HITS:1 COG:no KEGG:CAP2UW1_2831 NR:ns ## KEGG: CAP2UW1_2831 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 326 617 12 304 308 164 33.0 7e-39 MSLNNWKENGQPKQMGDQEKPLNDGVSAESQQDVDFWDHNQNGVVENEVEVVADAVEIQE TVEGQEVVEHPEMPSEKNEKKAKRKKDKAKKKKNKAEDLNAPDLLGTNKGVETMFRNAVR SEMELLALAATKANIMISLNGFIVSALMISGAFIFSSSPEFLIPASTFMITAAASIVFAL LSASPERIGKMQAARTWLKDFVRGRSKLRDLKTRLSSTETRFFGGSQPNILIYEDRVKLQ KDQYWEMMQEIMGDRKQIYEKMSDHLYWLGLLADKQFKYINLSYAVFRWGLLASLAAFIG VKTLPSLLTSPANNAAELRSLGINMFNGVFEPSAVQQLPDGKLLIAEDEPNHAFSIISID KTGRFVEDEALDTRVITGFKRRLSDLEALARDDEGFIYALTSHSRTRKGNRSPDREHLMR FKIQDGNVLGLTSYDNLTQVLETDHKLHDLIRERTKAEVSFEEINIEGMAFDPVKKRLVL GFRDPEFNNMALVAFISNPKDVFERNAKPEFDEVAVIDIDGGGIRSLNYDPVLKTYVIAN EVKDENGQKFSQLWTWSGNPTDEPQKISLPNLQHITNVEAVDSITVNGKPQMILMGDEGN ASQKITAKYMLVDYSQLGKQ >gi|241320352|gb|ACQV01000016.1| GENE 93 90760 - 91044 569 94 aa, chain - ## HITS:1 COG:no KEGG:NMC1683 NR:ns ## KEGG: NMC1683 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 93 1 93 94 132 77.0 3e-30 MKKFLLTAIVALSAATAGASDYIEHKIYSDKNFEQNRAKAVKMLEQRGYQVHDVEADSRR GQPVLDIEAFKDGREYDIVLSYPDLKIIKERIDY >gi|241320352|gb|ACQV01000016.1| GENE 94 91276 - 92076 629 266 aa, chain + ## HITS:1 COG:BH2505 KEGG:ns NR:ns ## COG: BH2505 COG0631 # Protein_GI_number: 15615068 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Bacillus halodurans # 8 211 4 202 249 68 30.0 2e-11 MNKFCEITFCQQIGSNQQHNQDALFNGEQVFQYKLKTAETRLETRPRFIIGIADGISNSN HPEKASKSAMHLLSRTAKLSRQTINHVQAALSQELAEDYFGSSTTFVAAEIDQTTGKTKI ISVGDSRAYLIDTQGKWKQLTQDHSILSELLDGLSDKKEEEFATIYGGVSSYLVADYSEF QDKMCHIKLTLKAGESLLLCSDGLSDALSEEIREKIWQQYDNDKSRLTVFRKLIAKQRVY DDMSVVVCKIIQTPSIQPFNNHCHPF >gi|241320352|gb|ACQV01000016.1| GENE 95 92175 - 93176 917 333 aa, chain + ## HITS:1 COG:PA2540_1 KEGG:ns NR:ns ## COG: PA2540_1 COG2267 # Protein_GI_number: 15597736 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Pseudomonas aeruginosa # 4 267 5 271 274 358 66.0 6e-99 MSEQQKYFSTQDGTSLFYRYRPADDGSSDKAIVLFHRGHEHSGRMMFVADELGFNDFAYF AWDARGHGYSPGERGDSPSIGTSVADVDDFIRHIQHEYGIKPENICVITQSVGAVLVSTW LHDYAPKIRCAVLASPAFKVKLYFPFARTGLKIMQKWRGNFFVNSYVKAHYLTHNKERQT SYDNDPLIARAISVRILLGLYEAAERVVADAQAITTPVQLLISGSDWVVHHKPQHDFYNR LGSRIKERHILPGFYHDTLGEQNREIAFVEMRRFIRERFNQPLYQVDLTQAHLHGAAAKL TNWQRLCLFVRHAAHFGRLTALPSILARAGVRV >gi|241320352|gb|ACQV01000016.1| GENE 96 93092 - 93913 1019 273 aa, chain + ## HITS:1 COG:PA2540_2 KEGG:ns NR:ns ## COG: PA2540_2 COG0500 # Protein_GI_number: 15597736 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 5 272 42 309 312 322 58.0 5e-88 MSICSPRGAFWAAYRASLDLGARWSEGLKIGKETGYDSGSTLDYVYRNQPQGSNAFGVAV DKHYLNAIGWRGIRQRKINIGKAIQTASAKLREAGKPVHVLDIASGHGRYVLDALTADTL PDSVRLRDYSPINVEAGRKLIAERGLQETVTFNEVNAYDRANYQDLQPRPTLGIVSGLHE LFADNDLILNSLYGFGDAIETGGYLIYTGQPWHPQLEMIARALTSHKAGSPNWVMRRRSQ QEMDQLVEKAGFEKIHQWIDEDGIFTVSLAVKK >gi|241320352|gb|ACQV01000016.1| GENE 97 93967 - 95265 836 432 aa, chain + ## HITS:1 COG:PA2539_1 KEGG:ns NR:ns ## COG: PA2539_1 COG0671 # Protein_GI_number: 15597735 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Pseudomonas aeruginosa # 13 340 1 336 336 204 42.0 3e-52 MYLSMKPSLKTSLLKLILVGILFYTSYGLSNHYAASLDYVPEIAFSWESNIPFWAWTIVP YWSLNLIYATAFFLCRDTHEQNRYVAHLVAAQLIATVCFVLFPLRFGWPKPPADELSGWL FDSLAAFDLPYNQAPSLHIALAIIVGAFYWTRFPKIRLPLFLWQSLIALSVLTTYQHHFI DMPTGALLGWLVLWAFPRQMTSPLRLDSSDVRSRKIALLYLLGACLMALPALLGGAWLWL IWISVSLLMVAFAYLTGNANVFQKQANGKLSAAATVLLLPYLVGVRLNMAYWLRGKAKTA QVRNDVWIGSVLGISNHLPAVLDVCAEYPCRSYQGEYRSLPLLDMVTPSKNDLVQTALIL ETLRQKHGKVLVCCALGYGRSAAVVLTWLLVYGGCQDLTQAKAELKQARPQMVLSPATAQ AVEAAANRLKQG >gi|241320352|gb|ACQV01000016.1| GENE 98 95268 - 95642 429 124 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1516 NR:ns ## KEGG: NT05HA_1516 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 4 123 2 121 121 89 38.0 3e-17 MDNATDSRITAHLLSTAHYVAACNALLLALSAKYGGAWFAVQLFLAAVLLYCHIRIHFDH RVFQDFADNRYSPEDFDQSLQQNGLRQISGSRTLTQRINGTLTLWRKSLYLTAAQFLILL IQSI >gi|241320352|gb|ACQV01000016.1| GENE 99 95706 - 96413 941 235 aa, chain + ## HITS:1 COG:PM2001 KEGG:ns NR:ns ## COG: PM2001 COG0204 # Protein_GI_number: 15603866 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Pasteurella multocida # 9 212 2 204 209 234 55.0 1e-61 MKNFLKKQLAWLTDQALCLSVSFLTGVRPKSPRELTFNQHQKVYYANHGSHGDFVLVWIS LPRRWRLSTRPVAGSDYWLTSKLKRFIIQNVFNALLIPRHSDNPQAITEQMKDALNAGDS LIIFPEGTRNTDDNTILLPFKSGIYHLAKSKPNTEFVPIWIDNINRVLPKGKILPIPLLC EVHIGQPLTLQENEDKDSFLTRIREALLALRPSENDRSEPRQNEPEVQQNKGGQA >gi|241320352|gb|ACQV01000016.1| GENE 100 96410 - 97399 1399 329 aa, chain + ## HITS:1 COG:PM2002 KEGG:ns NR:ns ## COG: PM2002 COG4589 # Protein_GI_number: 15603867 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Pasteurella multocida # 26 327 6 308 309 335 59.0 6e-92 MSLSTTSQQIIVEQAAAHLTPQASYIFVGVFAVLCFASIIGQWLKRKNGADNATIANLNA RIYAWWLMMLVLLGAFWFGKIGTVVLFFLISFAALREFMTLVYRRRSDYYSMVVCFYLLL PVQYYFVYDDWYGMFSIFIPVYGFLILPIIASLSGQTAHFLERAAKTQWMAMICIFCLSH VPALMFLDLDGFDNSNNILLLIFLIGVVQVSDVLQYVWGKLIGGAKIMPSLSPSKTISGT VGGILSATAIAALMAPITPFSHDQAAIIGFIVCLMGFFGGLVMSAIKRDYGVKDWGNMIR GHGGMLDRVDSICFAAPVFFHITRYFWNG >gi|241320352|gb|ACQV01000016.1| GENE 101 97507 - 98127 714 206 aa, chain + ## HITS:1 COG:PM1879 KEGG:ns NR:ns ## COG: PM1879 COG3647 # Protein_GI_number: 15603744 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 7 201 8 202 205 244 62.0 8e-65 MNKPSPIFPIFLAAIIFTLIVWSGINPHDRAVWYAEIVPVASVFFLLVATYRIFRFSNLA YLFMSFWLIMHSIGAYYTFADVPFESINRFVEPILGENRNHYDRIAHYIIGFYAYPMAEW LLRRKLCNLPLALFFSLFFIMSVAAAYEIIEWQYAVIDGGEAGLEFLGSQGDIWDAQKDM LADTLGALTALFILVFTRPDKRLGFS >gi|241320352|gb|ACQV01000016.1| GENE 102 98660 - 99916 1875 418 aa, chain - ## HITS:1 COG:NMB1723 KEGG:ns NR:ns ## COG: NMB1723 COG2010 # Protein_GI_number: 15677569 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Neisseria meningitidis MC58 # 1 316 1 315 365 560 85.0 1e-159 MNTTSQFTSNFWNIYIAVIVVLSFIGLAWLLLSQNVVKRPKKGEEVKTTGHEWDGIEEYN NPLPRWWFWLYVCTWTFGIGYLVMYPGVGDFKGIWGWTSHGQYEEEVAKAEQKYGQVYAK FAKMPIDQVAKNPEAQAIGQNLFNTYCIQCHGSDAKGSKGFPNLTDDDWLWGGEPEKIQE TIEKGRTAAMPAWGPALGEEGVKNVTQYVMSLSKPKGQYDEERAERGKALFSGPPANCFT CHGDKGQGIQGLGPNLTDDVWLWGGTQKAITETITNGRSSQMPAWGHFLDKDKLHIMTAY VWGMSNKDGKKAPAKKAEPAQAAPAAEAKPEEASAKVDGKAVFEANCKTCHGGLIPGAPV VGKKEDWAPRIKQGKDTLHKHAIEGFNSMPAKGGNGSLSDDEVKAAVDFMANESGAKF >gi|241320352|gb|ACQV01000016.1| GENE 103 100119 - 100730 946 203 aa, chain - ## HITS:1 COG:NMA1979 KEGG:ns NR:ns ## COG: NMA1979 COG2993 # Protein_GI_number: 15794861 # Func_class: C Energy production and conversion # Function: Cbb3-type cytochrome oxidase, cytochrome c subunit # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 203 396 93.0 1e-110 MKLQQLAEEKVGVLIVFTLLVVSVGLLIEAVPLFFSKAVTQPIEGVKPYNALQVAGRDIY VREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGSKRTGPDLARVGGRYSDEW HRIHLLNPRDVVPESNMPAFPWLARNKVDAEATVAHMKALRKVGTPYSDEEIEKAPEALA NKSELDAVIAYLQGLGLALKNVR >gi|241320352|gb|ACQV01000016.1| GENE 104 100754 - 102187 1846 477 aa, chain - ## HITS:1 COG:NMA1980 KEGG:ns NR:ns ## COG: NMA1980 COG3278 # Protein_GI_number: 15794862 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cbb3-type cytochrome oxidase, subunit 1 # Organism: Neisseria meningitidis Z2491 # 1 477 5 481 481 850 96.0 0 MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPSLDLSEIGPWFHFGRLRPLHT NAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQAVIVAAAISLPMGYTQGK EYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVANWFYGGFILAVALLHIVNNIS IPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAGRPIYSYRLSV VHFWALIFTYMWAGSHHLHYTALPDWTQSLGMVLSLILFAPSWGGMINGIMTLSGAWDKL RTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTVAHVHAGALGWVGFVTIGS VYYMIPRLFGKNEMYSTKLVEAHFWIATIGVVLYIAAMWIAGVMQGLMWGSLNADGTLTY SFVESVKRTMPYYMIRFAGGLLYLSGMCIMAYNVYRTAISGKAVDAEIPAVSQTQHH >gi|241320352|gb|ACQV01000016.1| GENE 105 102520 - 104271 2125 583 aa, chain + ## HITS:1 COG:NMB1726 KEGG:ns NR:ns ## COG: NMB1726 COG3975 # Protein_GI_number: 15677572 # Func_class: R General function prediction only # Function: Predicted protease with the C-terminal PDZ domain # Organism: Neisseria meningitidis MC58 # 1 581 1 581 582 893 71.0 0 MINYKITPNFLSHEWHITLSFTQPNDYETEISLPNWVPGSYLIRDFARHITHISACCDDK AQPLTQTSKNHWQTPALSGAWEIYYTVYAFDLSVRGSFLSTERGFFDGACLFLKVHGQEE QPHQVEFPTLPHTWQIATTLPQISATTFQTASYTELIDHPVETGIIEFLDFAAQGIPHRI ALSGIYPDFDRTRFLADIQKICETELAMFPSPAPFTEYLFLLHLGDNLYGGLEHISSTAL LADRHSLPSYDMGEADKAYTELLGLFSHEYFHAWNVKSIKPAVFAPYNLDQENYTEQLWA FEGITSYYDDLFLARSKTISPEAYLTLLAQGITRVQQTQGRLKQTLAQSSFSAWDKFYKQ DENSPNAIVSYYQKGALAALCLDLIVREKSQGKYTLDSVMQQHYRDWCNTHQGIPEKHWQ SRCQEMTGLDLETFFQTALYSTEDLPLAECLQSVGVKLDFIPLPRQHGGAFASEPQSVAP TNDLGARFKQNGDHAVLTHVFNGGSAENAGLCPQDKIIALGGYACNDLAAQWGKLPIGTR TTIHFFRQGLLRETSITVQAAEANTALLHITDRQKLEHWLYNH >gi|241320352|gb|ACQV01000016.1| GENE 106 104350 - 104790 668 146 aa, chain + ## HITS:1 COG:NMB1727 KEGG:ns NR:ns ## COG: NMB1727 COG3453 # Protein_GI_number: 15677573 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 141 1 141 142 160 53.0 6e-40 MPIRKLTDSLYIAPQLTEADVQEAVRLGIQTVICNRPDGEEENQPTFAEVQNWFKEAGIN QFSHQPVVAPQINAADVAAFQNLLQQSPAPILAFCRTGTRCSLLWGYHQVQHGASVAEVV AAAEQAGVNLSNFEARLQEAKDKGLA >gi|241320352|gb|ACQV01000016.1| GENE 107 105226 - 105522 455 98 aa, chain + ## HITS:1 COG:NMA1375 KEGG:ns NR:ns ## COG: NMA1375 COG1396 # Protein_GI_number: 15794296 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 97 2 98 106 146 79.0 1e-35 MVNKLTPPPNLPDPQDLRAVIAYNMRLYRVNHGWSQEELARQCGLDRTYVSAVERKRWNI ALSNIEKIASALKIAPYKLLLPPQEMLRQMTEPADTQA >gi|241320352|gb|ACQV01000016.1| GENE 108 105542 - 108100 3028 852 aa, chain + ## HITS:1 COG:NMB1203 KEGG:ns NR:ns ## COG: NMB1203 COG2844 # Protein_GI_number: 15677076 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Neisseria meningitidis MC58 # 7 851 8 852 852 1114 65.0 0 MTAAQQAIQTYQQQKAAAETAYHQNNRPTVYFRDHIAAAETLLQTIWQIHFPDSNDISLI AIGGFGRCELYPHSDWDLAIISSAPFSDGLQQQTAQFIQTLWDAHLNPAIKSGSIEEILQ STQNDITGETAFLEARHLQGNTDLTAQLLNKLNTRRDTAAFIEAKLLEMEQRHTKSQGTG AQLEPNIKTCPGGLRDIHTLIWTAKAQGIDSNPTALVTAGVLTRTEAGMLAHGYRRLANI RIHLHLTADRPEDRLLFDYQSQVAESLGYTQPDIRGRSEALMHTFYRATKTIKQLNGILI PVLKNHQTSSRPQHIHPIDSRYKRIGHQIAANDLALFEQNPEHIFTIIQTMQEQNITTIE PQTLRAWWAATRKINTRFTQNPENRRRFIQFFKHGTGLTQTLRFLNLYGVLGRYIPAWEK ITGLLQHDLFHIYPVDDHILTVVRNMRRLAIETHSHEMPEASAIMQAYPRPHVLYTAALL HDIAKGRGGDHAKEGIKDAQQFAANHYYTEEESHLLAWLVENHLLMSTVAQKEDIQDPHV LQAFCRRIPTREYLDALYLLTIADIRGTNPKLWNTWRASLLQTLYHSTAAVLNSKNHDPE RLPNRREQAAADQLTRAAVPLKNQQKLRRILGSAYYVRHQTREILWHTANLAYDTQSPAV RSRILPQSNSLQVMVFMPNGDRLFARLCRIFSSHRFDIQAARAFITEHDYILDTFILQLP DNLPPEEYPDRQSALEAELNSFIHGNTTVQKQSGRPHISRRIRHIPIPPTVIITPEEDYP GWHTIDITAVNRPHLLADIAETFFAHNISLRYAKITTLDQRIEDSFITYSPSLQDPQTQN TLKQALIEVLAP >gi|241320352|gb|ACQV01000016.1| GENE 109 108890 - 109441 664 183 aa, chain + ## HITS:1 COG:NMA0264 KEGG:ns NR:ns ## COG: NMA0264 COG4969 # Protein_GI_number: 15793282 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis Z2491 # 1 165 1 168 170 146 54.0 2e-35 MKAIQKGFSLIELMIVIAILGILAVIALPAYQDYTARAQVSEAILLMEGQKSAVVEYYAD KGKWPTSNTEAGIATNKSIQGKYVEQVDIGGNGVITATMKKKDVNKEIEGKTVSLTPTAT TATTATAGGTPGATANGSFTWTCKPGATNGVATKFLPSSCRPDATTSSSGTGGSGTGGSG TGS >gi|241320352|gb|ACQV01000016.1| GENE 110 109541 - 109999 397 152 aa, chain + ## HITS:1 COG:NMA0264 KEGG:ns NR:ns ## COG: NMA0264 COG4969 # Protein_GI_number: 15793282 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Neisseria meningitidis Z2491 # 8 136 5 128 170 86 42.0 2e-17 MKNLRKAQIGFSLIELMIVIGIIGILAVAALPAYQNYVARAQVAEGIMLAGSMKSYVEEA YADKGSLPLNLNIKQLASDDNKVGNYVKIVRIEDNGTIVVAIGNQAAVPVKNTEIHLTPS FAKTGATKGTTVWSCGGTMDTHFLPVSCKQSL >gi|241320352|gb|ACQV01000016.1| GENE 111 110393 - 110875 502 160 aa, chain + ## HITS:1 COG:NMB0573 KEGG:ns NR:ns ## COG: NMB0573 COG1522 # Protein_GI_number: 15676478 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 1 160 28 187 187 271 85.0 4e-73 MPHLNLDKTDLKILQVLQENGRLSNVELSEKVALSPSPCLRRLKQLEDAGIIQKYAAQLS PVSLGLGLQAFIRVSISKAKDAREDFSESVRAWPEVLSCFALTGETDYLLHAFFTDMNAF SHFVLDTLLSHHGVQDAQSSFVLKEIKNTTALPLVHLVQD >gi|241320352|gb|ACQV01000016.1| GENE 112 110993 - 111589 801 198 aa, chain + ## HITS:1 COG:NMB0572 KEGG:ns NR:ns ## COG: NMB0572 COG3310 # Protein_GI_number: 15676477 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 10 198 13 201 201 322 83.0 4e-88 MTDTAHLDIDTVSEHTKQWLEKAVIGLNLCPFAKAPHVKNLVRIVVSEARHLDGFLEDLD RELQLLGNTPASELETTLLVHPTLFPDFETFNQMLEITDDAVVENELEGIVQIAPFHPDF QFEGTEADDISNYTNRSPYPTLHLIREDSIAKAAEAFPDASAIFDRNIALLEKMGHEGWD KLDIPRCPFPHHKPSENK >gi|241320352|gb|ACQV01000016.1| GENE 113 111604 - 111963 77 119 aa, chain + ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 119 1 119 119 179 78.0 1e-45 MVRYLLIFCGALSLILGIIGIFLPLLPTTPFILLTAACWAKASPRFHNWLYHHRHFGPII QNWENNGAVPRKAKFFAIGMMALSCLFMFWQFPERWWIGAVSSVFCSCVAVWMWLRPEA >gi|241320352|gb|ACQV01000016.1| GENE 114 112095 - 112208 113 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGVVGSSKKMVLKQELETLKIILSKKCFELILAKIYI >gi|241320352|gb|ACQV01000016.1| GENE 115 112408 - 113826 1498 472 aa, chain + ## HITS:1 COG:NMB0570 KEGG:ns NR:ns ## COG: NMB0570 COG1055 # Protein_GI_number: 15676475 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Neisseria meningitidis MC58 # 1 472 1 473 473 683 80.0 0 MRYLSFSLLLAALPAAASDFNGSSASLLWGLPFALILLSIALGPLFFSHIWHHHFGKITA FWTLLFLTPFIVTFGFGAGVHTVAHALVEEYIPFILLLLALYTISGGIFVSGDLHGSPKL NTTLLAVGTALSSIMGTTGAAMLMIRPLLKANHKRHYRVHIVIFFIFLVANIGGGLTPLG DPPLFLGFLKGVDFMWTVKHMLMPVLISSVILLAVFYIIDSRHFNREQSEHLAPAPSDKE DKVKIYGKWNFLLLAGVVGAVLLSGLWKPNHPGFEILGSHYALQNLMRDGILLALTAVSW IITPKQVRAGNEFNFEPIAEVGKLFLGIFITISPVLAILKAGETGALASVVSLVHDAAGN PINVMYFWMSGILSAFLDNAPTYLVFFNMAGGDAQALMTGHLFHSLLAVSMGSVFMGALT YIGNAPNFMVKAIAEQRGVPMPSFFGYMAWSVIVLVPLFALHTMVFFVWQLF >gi|241320352|gb|ACQV01000016.1| GENE 116 114164 - 115507 1786 447 aa, chain + ## HITS:1 COG:NMA0752 KEGG:ns NR:ns ## COG: NMA0752 COG1726 # Protein_GI_number: 15793727 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 862 95.0 0 MIKIKKGLDLPIAGRPEQVIYDGPAITEVALLGEEYVGMRPSMKIKEGEAVKKGQVLFED KKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEFECYAPEALAKLSSEEVRR NLIQSGLWTALRTRPFSKTPAVDAEPFAIFVNAMDTNPLAADPTVIITEAAEDFKRGLLV LSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPAGLSGTHIHFIEPVGANKTVWTI NYQDVIAIGRLFVTGRLNTERVVALGGPQVNKPRLLRTVLGAKVSQITAGELVGADNRVI SGSVLNGVIAQGAHDYLGRYHNQISVIEEGRSKELFGWVAPQPDKYSITRTTLGHFLKNK LFKFTTAVNGGDRAMVPIGTYERVMPLDILPTLLLRDLIVGDTDSAQALGCLELDEEDLA LCSFVCPGKYEYGPLLRKVLETIEKEG >gi|241320352|gb|ACQV01000016.1| GENE 117 115510 - 116742 1803 410 aa, chain + ## HITS:1 COG:NMA0751 KEGG:ns NR:ns ## COG: NMA0751 COG1805 # Protein_GI_number: 15793726 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Neisseria meningitidis Z2491 # 1 410 1 410 410 733 96.0 0 MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKAAHVRDALDSKRMMILV WLALFPAMFYGMYNVGVQAFGALTPDLLQQNIANDWHYALANALGINMSSEAGVLGKMLF GAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSILFALIVPPTLPLWQAALGIT FGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANITGDTVWTAVDGYSGATALAQWAAH GADGLQNAVTGKSITWMDAFIGNLPGSIGEVSTLALLIGGAFIVFVRIASWRIIAGVMIG MIAMSSLFNVIGSDTNAMFSMPWYWHLVVGGFAIGMLFMATDPVSASFTNVGKWWYGALI GVMCVLIRVVNPAYPEGMMLAILFANLFAPIFDYFVAQANIKRRKARSNG >gi|241320352|gb|ACQV01000016.1| GENE 118 116735 - 117511 1133 258 aa, chain + ## HITS:1 COG:NMA0750 KEGG:ns NR:ns ## COG: NMA0750 COG2869 # Protein_GI_number: 15793725 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 464 93.0 1e-131 MAKKFDKDSFSGTLIVVLVVSLICSIIVAGAVVGLKPIQEKQKLQDKQGYILSVAGLMDK NTDISKTFAERIEQRVVDLATGEYVADAPKDFSARVAGKDPAQSIQIKPEDDLAGIKSRA KYTEVYLVKGDDGKVSQIILPMHGNGLWSVMYGFVAIQPDGNTINGITYYDQGETPGLGG EIGNPLWQKKFVGKKLFDEQGKFALHVGKGASSDKEHGVDALSGASLTSKGVQGSFDYWF GENGYIPYLNKLKSAGAQ >gi|241320352|gb|ACQV01000016.1| GENE 119 117511 - 118137 916 208 aa, chain + ## HITS:1 COG:NMA0749 KEGG:ns NR:ns ## COG: NMA0749 COG1347 # Protein_GI_number: 15793724 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Neisseria meningitidis Z2491 # 1 208 1 208 208 372 94.0 1e-103 MADMKRLKYLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVMGISVALVTGFSSFFIS LVRNYIPNSIRIIVQMAIVASLVTLVDQLLQAFAYELSKQLSVFVGLIITNCIVMGRAEA FAMKEPPLESLVDGIGNGAGYGMMLIIIATIRELIGSGKLFGYTIFQTVQDGGWYQTNGL FLLAPSAFFIIGFLVWGLRTWKPEQAEK >gi|241320352|gb|ACQV01000016.1| GENE 120 118141 - 118734 1013 197 aa, chain + ## HITS:1 COG:NMB0565 KEGG:ns NR:ns ## COG: NMB0565 COG2209 # Protein_GI_number: 15676470 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Neisseria meningitidis MC58 # 1 197 1 197 197 303 95.0 1e-82 MEHYLSLFVKSVFLENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLGLSVPANQLVY SLLKDGALVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVPALYNALGIYLPLITVNCA IFGAVSFMAQREYNFGESVVYGFGAGLGWLLAIVALAGITEKMKYSDVPKGLKGLGITFI AAGLMAMAFMSFSGIQL >gi|241320352|gb|ACQV01000016.1| GENE 121 118748 - 119965 1966 405 aa, chain + ## HITS:1 COG:NMB0564 KEGG:ns NR:ns ## COG: NMB0564 COG2871 # Protein_GI_number: 15676469 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 785 98.0 0 MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKELTMPAGGKLLGALASQG IFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREAREGCRLSCQVNVKTDMDIEV PEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFRAGGYIQIEAPPHTVAYKDFD IPKEYHEDWDKYNLWQYVSTVDEPILRAYSMASYPEEKGIIMLNVRIATPPPRVPDAPPG QMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLNSKR KITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIHNVVYENH LKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENILLDDFGG >gi|241320352|gb|ACQV01000016.1| GENE 122 120098 - 121168 972 356 aa, chain + ## HITS:1 COG:NMB0563 KEGG:ns NR:ns ## COG: NMB0563 COG1477 # Protein_GI_number: 15676468 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Neisseria meningitidis MC58 # 20 355 18 350 351 484 73.0 1e-136 MPFLSNSFYRPIIGCTVAILSALTLSACQPEKQQQTITLQGETMGTTYTVKYLSDGQDKL PPPAEIQKRIDDTLKEVNRQMSTYQTDSEISQFNQLRTVNQAMPISQDFAYVTGEALRLN KLTHGALDVTVGPLVNLWGFGPQKEITHEPTAQEIQHASEMVGTDKLKLSQDGQQPTLAK THPEVYLDLSSIAKGFGVDKTAAELEKLNIGNYLVEIGGELHGKGHNAQGNPWRIGIEQP NIVQGGATQITIPLDNKSLATSGDYRIFHVDKSGRRLSHIINPKTKQPISHNLASISVVA ENATLADGLSTGLFVLGETEALKLAEQENLAVFLIIRTPQGGYHTKMSSTFKKLLN >gi|241320352|gb|ACQV01000016.1| GENE 123 121186 - 121407 464 73 aa, chain + ## HITS:1 COG:NMA0745 KEGG:ns NR:ns ## COG: NMA0745 COG2991 # Protein_GI_number: 15793720 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 72 1 70 71 105 77.0 2e-23 MKTLLLTFGIFIIVILGMAVGYIFSKRTIKGSCGGISSLGMKKMCDCDTPCDTLQKELDK KQHSDNQGIKVDH >gi|241320352|gb|ACQV01000016.1| GENE 124 121632 - 121787 265 51 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225368008|ref|ZP_03747866.1| hypothetical protein NEIMUCOT_01871 [Neisseria mucosa ATCC 25996] # 1 51 1 51 51 106 100 5e-22 MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVIYKETKLK >gi|241320352|gb|ACQV01000016.1| GENE 125 121818 - 122051 395 77 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58] # 1 77 1 77 77 156 100 4e-37 MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID KVGIDVVLADLRARGEA >gi|241320352|gb|ACQV01000016.1| GENE 126 122302 - 123630 1316 442 aa, chain - ## HITS:1 COG:BS_brnQ KEGG:ns NR:ns ## COG: BS_brnQ COG1114 # Protein_GI_number: 16079722 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 15 435 13 433 440 320 45.0 3e-87 MDSTTSHTKASLWAVGLMLFALFFGAGNLIFPAFLGQQAGENWLSAMFGFLLTGAGLPLL GVIAVGYSGSRDVEALASRVAPWYGVTFATALYLAIGPLFAMPRTATVSFETAISPFIGE SWKNIALAVFSLVFFGMTYWLSISPGKLVDRIGKILTPVLLLSIAILVGYAAINPMGVPQ AAQGDFASYPLVKGILEGYGTMDALASLVFAIIVIDAVRAMGVDNRADLLKTTTISGVLA ASCLAVVYLFIGYMGATGVAGIGLQENGASVLSKTAQHYFGTAGIVLLGVMVLLACLSTA VGLITSCAEYFNRLCPGISYKAFVILNTVVSILLANKGLSAILQFSIPMLMLLYPLTIVI ILLALTDKLFGGGRIVYFCTMMAALLVGLIDAYKAAFGFNADTAAAIERALPFYNIGLGW VVPSLACFILGCILNAALKKKA >gi|241320352|gb|ACQV01000016.1| GENE 127 123632 - 124528 892 298 aa, chain - ## HITS:1 COG:NMB1504 KEGG:ns NR:ns ## COG: NMB1504 COG1354 # Protein_GI_number: 15677357 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 16 268 12 264 284 449 90.0 1e-126 MPSEHLISSTAATPSEHTVAWVFGQPVTDVPQDLFIPPDALKVVLSSFQGPLDLLLYLIR KQNIDVLDIPMVKITEQYLHYIAQMEAYQFDLAAEYLLMAAMLIEIKSRLLLPRPEEVED EEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLEIAVEAKLPEVYVADLT QAWLGILSRAKHTRSHEVVRETISVRAQMTAILRRLNESGISKFSDLFKPEQGATYVVVN FIALLELAKEGLVRIVQPENYGEIEISLKDGLETNEAEMLSDGLEADETDNENLNKEN >gi|241320352|gb|ACQV01000016.1| GENE 128 124621 - 125088 431 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759322|ref|ZP_04757428.1| ## NR: gi|241759322|ref|ZP_04757428.1| hypothetical protein NEIFL0001_1874 [Neisseria flavescens SK114] # 1 155 1 155 155 275 100.0 5e-73 MVKSRFFKAYFIASLIYAVWFGVLMYAVDPMFLDVMECNTLPGDYLCVQSGYDRPFTTFL YPFLSIVIFSLLHASIMKWRKRRSVKMIWFLVGCESLLLLALIVAMLARDGFVLSQDVGS VLAGTVFASLPLLGMALAQTFAVAIVSLQINREKR >gi|241320352|gb|ACQV01000016.1| GENE 129 125102 - 125878 634 258 aa, chain - ## HITS:1 COG:NMB1501 KEGG:ns NR:ns ## COG: NMB1501 COG1179 # Protein_GI_number: 15677354 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Neisseria meningitidis MC58 # 1 258 1 258 258 441 87.0 1e-124 MQDAAFLSSRRFGGIARLYGDEALARFSRAHVCVVGVGGVGSWAVEALARSGIGRLTLID LDNVAESNVNRQLHALTDDFGKAKVTALRERIAQINPQCEVTEIEDFVTEDNLDELFRRP FDFVIDAIDQIRVKAAMAAYFVQHKQPFIISGGAGGQKNPALIQTADLSRVTHDPLLSNL RYTLRKRYGFSRDTKEKMRVPCVYSIENITPPQSGEACSTDVAPQGLSCAGYGASMLVTA SFGLYCAQAAVEHITGRK >gi|241320352|gb|ACQV01000016.1| GENE 130 126065 - 126529 853 154 aa, chain + ## HITS:1 COG:NMA1703 KEGG:ns NR:ns ## COG: NMA1703 COG0589 # Protein_GI_number: 15794596 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 154 1 154 154 243 93.0 9e-65 MYKHLVVAVDGSETSLNALKHAAELASLNKAQLTLVHVANPAEYMALAPEFLQHESYEAA AVAQGNEVLDFAEKTARESGVENIVKHLLVANKGAREMAQDLVDYADKNGADLLVLGTHG RTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA >gi|241320352|gb|ACQV01000016.1| GENE 131 126612 - 127895 1930 427 aa, chain - ## HITS:1 COG:NMA0592 KEGG:ns NR:ns ## COG: NMA0592 COG0001 # Protein_GI_number: 15793583 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 426 1 426 427 773 93.0 0 MNRNESLFNRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYVWDENGTRYTDYVGSWG PAIVGHAHPEVIEAVREAALGGLSFGAPTEGEIVIAEEIAKIMPSVEQLRLVSSGTEATM TAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTFGNPSSAGVPADFTKHTLVLE YNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEAFVKALRELTEKHGAVLIYDEVM TGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAFGGRKDIMECISPLGGVYQAGTLSG NPIAVAAGLKTLEIIQREGFYENLTALTQRLANGIADAAKAHGVEFTADSVGGMFGLYFA SHTPQNYADMARSNIDGFKHFFHGMLDRNVAFGPSAYEAGFVSAAHTPELIDETIAVAHE VFKEMAK >gi|241320352|gb|ACQV01000016.1| GENE 132 128094 - 128489 532 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759325|ref|ZP_04757431.1| ## NR: gi|241759325|ref|ZP_04757431.1| hypothetical protein NEIFL0001_1879 [Neisseria flavescens SK114] # 1 131 1 131 131 233 100.0 3e-60 MLRGFILSLALLASSLVHAQRSLPDDMDVAVLKTVDLAYLKVSKGGFSWTRLLTLGIVDG NAAKLQITRFTKIHDENDRFIPMGRLLNQTGKAVAFKYNEESRLVREIWILTDAEADRFI EHAKKQKKAEE >gi|241320352|gb|ACQV01000016.1| GENE 133 128563 - 129885 522 440 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 430 1 426 451 205 32 8e-52 MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVF SDLGRVRPLKEKNPDLIIGVAGCVASQEGENIVKRAPYVDVVFGPQTLHRLPKLIVDKET TGLSQIDISFPEIEKFDHLPPARVEGGSAFISIMEGCSKYCSYCVVPYTRGEEFSRPLND VLTEIAGLAQQGVKEINLLGQNVNAYRGEMENGEICDFATLLRIVHEIPGIERLRFTTSH PREFTDAIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDL CLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLHDDTPHEEKVR RLEALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTPDMIN QMIDLEITEAYTFSLKGKPV >gi|241320352|gb|ACQV01000016.1| GENE 134 130113 - 131423 2064 436 aa, chain + ## HITS:1 COG:NMA2056 KEGG:ns NR:ns ## COG: NMA2056 COG2252 # Protein_GI_number: 15794934 # Func_class: R General function prediction only # Function: Permeases # Organism: Neisseria meningitidis Z2491 # 1 435 1 435 436 655 87.0 0 MSSSNQSVLERLFNLNANQTNVRTEIMAGVTTFLAMCYIIIVNPLILGETGMDMGAVFVA TCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGVDWRVALSAVFISGIIFIL FSFFKVREMLVNALPMGLKMSIAAGIGLFLALIALKGAGVIVANPATLVGLGDIHQPTAL LAMAGFVMVVALGHFRVKGSIIITILTLTAISTILGLSEFKGVVGEIPSIAPTFMQMDFK GLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLLQDGKLPRLKRALLADSTAIIAGAA LGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLMLACLIFSPLVQSIPAFATAPALLYVGA QMLRSAREIDWDDMTEAAPAFLTIVFMPFTYSIADGIAFGFISYALIKLLCNRTQDVPPM VWIVAVLWALKFWFLS >gi|241320352|gb|ACQV01000016.1| GENE 135 131506 - 132063 872 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759356|ref|ZP_04757462.1| ## NR: gi|241759356|ref|ZP_04757462.1| hypothetical protein NEIFL0001_1882 [Neisseria flavescens SK114] # 1 166 17 182 201 244 100.0 2e-63 MNMNVKLIVPAVLAAVALTACSSGSKAKPETKAAPTAQQQTQAQAQQAQAPVPNTLKVDS IDGTKEVHYKCGKDGKEPLSVMYGFKGNEVVAAQVKYKGQLTENLFRITDSSKDVNAFWG GNVAWVAEAATAANVDKVDGNMLTIRGTTEVNGKQEVVDQIVTRFCALDKGAKAAAKPAA KKVKK Prediction of potential genes in microbial genomes Time: Thu May 26 11:34:37 2011 Seq name: gi|241320312|gb|ACQV01000017.1| Neisseria flavescens SK114 ctg1118407793876, whole genome shotgun sequence Length of sequence - 22238 bp Number of predicted genes - 19, with homology - 17 Number of transcription units - 12, operones - 5 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 82 - 1080 1275 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 1113 - 1172 6.2 + Prom 1061 - 1120 5.8 2 2 Op 1 3/0.000 + CDS 1295 - 1618 542 ## COG5416 Uncharacterized integral membrane protein 3 2 Op 2 . + CDS 1644 - 2813 1821 ## COG2956 Predicted N-acetylglucosaminyl transferase + Term 2836 - 2874 10.2 - Term 2824 - 2862 10.2 4 3 Op 1 . - CDS 2928 - 3434 645 ## MS1692 hypothetical protein 5 3 Op 2 . - CDS 3438 - 6737 2604 ## COG1330 Exonuclease V gamma subunit - Prom 6760 - 6819 6.1 - Term 6934 - 6977 9.6 6 4 Tu 1 . - CDS 6989 - 7864 649 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 7885 - 7944 4.8 + Prom 8139 - 8198 6.0 7 5 Tu 1 . + CDS 8257 - 9426 1912 ## COG0192 S-adenosylmethionine synthetase + Term 9439 - 9488 12.2 + Prom 9438 - 9497 6.4 8 6 Op 1 4/0.000 + CDS 9536 - 9856 703 ## COG2960 Uncharacterized protein conserved in bacteria 9 6 Op 2 2/0.333 + CDS 9870 - 11366 2000 ## COG0606 Predicted ATPase with chaperone activity + Prom 11405 - 11464 4.9 10 7 Op 1 3/0.000 + CDS 11521 - 12459 1455 ## COG3087 Cell division protein 11 7 Op 2 2/0.333 + CDS 12471 - 13112 754 ## COG0526 Thiol-disulfide isomerase and thioredoxins 12 7 Op 3 . + CDS 13157 - 13981 815 ## COG1968 Uncharacterized bacitracin resistance protein + Term 14001 - 14032 -0.7 13 8 Tu 1 . - CDS 14064 - 14558 100 ## COG4968 Tfp pilus assembly protein PilE - Prom 14685 - 14744 3.8 14 9 Op 1 5/0.000 - CDS 14755 - 15144 328 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 15239 - 15298 2.3 - Term 15159 - 15212 2.0 15 9 Op 2 5/0.000 - CDS 15325 - 15507 170 ## COG3039 Transposase and inactivated derivatives, IS5 family 16 9 Op 3 . - CDS 15661 - 15834 198 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 15945 - 16004 4.2 - Term 15990 - 16028 3.3 17 10 Tu 1 . - CDS 16070 - 16357 370 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 16392 - 16451 3.6 + Prom 16325 - 16384 4.4 18 11 Tu 1 . + CDS 16409 - 16564 71 ## - Term 16467 - 16498 -1.0 19 12 Tu 1 . - CDS 16529 - 16708 64 ## - Prom 16957 - 17016 80.4 - 5S_RRNA 16735 - 16843 98.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. - LSU_RRNA 16940 - 19676 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. - TRNA 20178 - 20253 93.7 # Ala TGC 0 0 - TRNA 20259 - 20335 96.8 # Ile GAT 0 0 - SSU_RRNA 20442 - 21974 99.0 # FJ983092 [D:1..1534] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Predicted protein(s) >gi|241320312|gb|ACQV01000017.1| GENE 1 82 - 1080 1275 332 aa, chain - ## HITS:1 COG:NMB0337 KEGG:ns NR:ns ## COG: NMB0337 COG0115 # Protein_GI_number: 15676252 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Neisseria meningitidis MC58 # 1 332 1 332 332 647 94.0 0 MSRPVPAVFGSVFHAEMPVIAYREGKWQPVEWQSSKDLTIAPGAHALHYGSECFEGLKAF RQANGKIVMFRPTANIARMQQSADILHLPRPETEAYLDALIELVKRSAEEIPDAPAALYL RPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKAGSPVKILVETEHIRCAPHMGRVKC GGNYASAMPWVLKAKAEYGANQVLFCPNGDVQETGASNFILINGDEIITKPLTDEFLHGV TRDSVLTVAKDLGYTVTERNFTVDELKAAVENGAEAILTGTAAVISPVTSFVIDGKEIEV KSQERGYAIRKAITDIQYGLIEDKHGWLVEVC >gi|241320312|gb|ACQV01000017.1| GENE 2 1295 - 1618 542 107 aa, chain + ## HITS:1 COG:NMB0338 KEGG:ns NR:ns ## COG: NMB0338 COG5416 # Protein_GI_number: 15676253 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Neisseria meningitidis MC58 # 1 102 57 159 160 112 66.0 2e-25 MKLISTIIKILILLVFLLLAITNTHTVSFFYLPGQNINLPLIVVLFGAFIIGIVFGMFAL FGRLLFLRSENNRLRAEVKKHAHLSEKDLTPVKTETPATTSEATPKA >gi|241320312|gb|ACQV01000017.1| GENE 3 1644 - 2813 1821 389 aa, chain + ## HITS:1 COG:NMB0339 KEGG:ns NR:ns ## COG: NMB0339 COG2956 # Protein_GI_number: 15676254 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Neisseria meningitidis MC58 # 1 389 1 389 389 702 89.0 0 MDNELWVILLPIVLLPVFFAMGWFAARVDMKTVLKQAKSIPAGFYKSLDALVDRNSGRAA RELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHRALLDSPDTVNEKRARVLFELAQ NYQSAGLVDRAEQIFLGLQEGDMAREARQHLLSIYQQDRDWEKAIEMAQLLSHDEQTYQF EIAQFYCEIAQAALFKSNFDAARYNIGKALEANKKCTRANIILGDIEYRQGNFPAAVEAY SAIEQQNHAYLSMVGEKLYEAYAAQGKQEEGLNRLIGYMQTFPDLDLINVIYEKALLLKG ETEAAQIAVELVRQKPDLNGVYRLLGLKLSSMNPEWKADTDMIRSIIGRQLQKSVMYRCR NCHFKSQVFFWHCPACNKWQTFTPNKIEI >gi|241320312|gb|ACQV01000017.1| GENE 4 2928 - 3434 645 168 aa, chain - ## HITS:1 COG:no KEGG:MS1692 NR:ns ## KEGG: MS1692 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 1 158 1 158 163 131 40.0 1e-29 MATYAEYLDFDTEEDKLKQQQLYQATELSAQTVAAVEKISRPQNWLLAAAPYCPDCRVFV PFIQKMAELNPNIRVNYIARNDFDDSSRFENPRQQEIVRANQKIPALFLMGYEEDGPAFN EFPQVVLNQIAADETRRTELRDAYRAGEFNADIEAQIVAALAWAEQRC >gi|241320312|gb|ACQV01000017.1| GENE 5 3438 - 6737 2604 1099 aa, chain - ## HITS:1 COG:NMA1974 KEGG:ns NR:ns ## COG: NMA1974 COG1330 # Protein_GI_number: 15794857 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Neisseria meningitidis Z2491 # 1 1077 1 1049 1069 1415 65.0 0 MFYLFQSDRLESLAEMCARIHQASPLDSVLAQEEVVVQSQGMRRYLNVFFARELGVAANL KFSLPAGLAWQLMRKLVPDVPPLSPFSPEVMRWRLLDLFRSEMFQTAPEYENVRLKLESY LYSSASADYQLAGQMADIFDQYLVYRPDWIDAWQAGKLLGLGDDEDWQARLWRYLDDGSQ SALHRVALWEKLLAQLDKSVLPQRLFVFGISTMAPMYLQLLHQISKHCDVFVFALNPSSQ YWGEVIDEAQILKRGDEADLSQAGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDD TLLHCLQKDIQNLIMPSERLYQQEEGEAGGQQALVQVHDADGNPVCVEPDKLLNDGSVKI VAAHSPLRELQILKEELSLVLQNNPDWQPHDIAVLTPNIEPYSPFIEAVFGQAHAGSQAL PYSISDVKLSRRQPLLYALAQTLDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHE TVAGLNVHWGLDQTMRDGKDNLFTWQQAVERLALGWMLPEGGNGMWRGVSAWYSNVNQLD VFSGFAEFIRTLADMAAQWQAPANVEIWVQRCRDLLEKLFAPDTDDQYAKQQFEQSLAKW QEEAQLAEFDGLLPCKTVIRHIRRFLDSESQAGFLSGGITFCSMVPMRSLPFKMVCLLGL NDGDFPRNTKAAVFDLIAKHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDA EFAPSSLISELLDTIAAMTGKSGRELSEKWVKHHPLQAFSRRYFQKDALSDGLFSTRQDY ADALNQPPAEAQPFFLEALSQEEPGKTIHQGELVSFWRNPVKVWLKKNLSWDQPYLDGAW ESAEPFEPQHEGRIADAYLDARRKGEDFEDTAIRLNAESLMPVGELGGLWQKQYQISAKN VDTELIRSNKRPSEPYEESFGDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIF CAVAPKSVANRQTHIVSLGQTETYAAIGQEAARELLKEWLVYFRIGQNTPLPFFAKTSLA AAEEYNKKEDWDAALRKAHEVFNGNKMSKGQKEYTEVKLVFGHLEESPLDEPLFENLVVN LLVPLLTGVAGKTDTTEQE >gi|241320312|gb|ACQV01000017.1| GENE 6 6989 - 7864 649 291 aa, chain - ## HITS:1 COG:NMB1801 KEGG:ns NR:ns ## COG: NMB1801 COG1560 # Protein_GI_number: 15677639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 21 283 36 298 298 423 78.0 1e-118 MQTLVTFVFKFLAALPLAWLHKLGNLLGSLGFRLLSKDRRRVFENMKLAGLNPTDEAVKK VFRETAKGGLELPVAFFRRPEEIENLFVSVNGWEHVQTALNTGEGLLFITPHIGSYDLAG RYISQQLPFPLTAMYKPPKIKAFDAVMQAGRVRGKGKTAPTSIQGVKQIIKALRGGEATI VLPDHVPSPEEGGDGVWVDFFGKPAYTMTLAGKLAQVKGVKALFFCGERLPDGKGFVLHI EPLRGELNGDKENDARVINENTEYWIRRFPEQYLFMYNRYKHPEGAPLPPA >gi|241320312|gb|ACQV01000017.1| GENE 7 8257 - 9426 1912 389 aa, chain + ## HITS:1 COG:NMB1799 KEGG:ns NR:ns ## COG: NMB1799 COG0192 # Protein_GI_number: 15677637 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Neisseria meningitidis MC58 # 1 389 1 389 389 734 98.0 0 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDLKARVAAETLVNTGLCVLAGEITTT AQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVNEGEGIDLNQGAG DQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSKTG KVKRIDTVVLSTQHDPSIGYEELKNAVIEHIIKPVLPSEMLTDETKYLINPTGRFVIGGP QGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQ IQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVREHFDLRPKGIVQMLDLLRPIYSKSA AYGHFGREEPEFTWERTDKAAALKAAAGV >gi|241320312|gb|ACQV01000017.1| GENE 8 9536 - 9856 703 106 aa, chain + ## HITS:1 COG:NMA2081 KEGG:ns NR:ns ## COG: NMA2081 COG2960 # Protein_GI_number: 15794957 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 106 12 117 117 119 90.0 1e-27 MFGKQLFEEVSSKISETIANSPAKDMEKNVKAMLGSAFNRMDLVTREEFDIQQQVLIKTR TKLAELEARLAKLEAAQEPEEAALKAAEAAAEEAVAEIKQQTEAAE >gi|241320312|gb|ACQV01000017.1| GENE 9 9870 - 11366 2000 498 aa, chain + ## HITS:1 COG:NMA2080 KEGG:ns NR:ns ## COG: NMA2080 COG0606 # Protein_GI_number: 15794956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Neisseria meningitidis Z2491 # 1 498 1 498 498 854 91.0 0 MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFDF PAKKITVNLAPADLPKESGRFDLPIALGILAASGQINPEKLSQYEFAGELALSGLLRPVR GALAMAWQGMQAGRSFVLPQENAEQAAVMRGIAVYGARSLGEVAAHLNDIEPLTQTECKL TQRPSEQSKIPDLADVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL TEDVLVEVWALRSLLPNHQQQLDSNRPFRSPHHSASSAAMVGGGSDPRPGEISLAHHGVL FLDELPEFDRKVLEVLREPLENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPSKP CRCTPESVARYRNKISGPLLDRIDLTIEVPSLSAAELMQQEAGESSAAVLERVTAARKIQ YNRQGKVNAELNVGELDGKARIQKEAQEALGTMLEKLSLSARSFHRIMRVARTLADLAGD EEVSKTHVMKAIGFRRAL >gi|241320312|gb|ACQV01000017.1| GENE 10 11521 - 12459 1455 312 aa, chain + ## HITS:1 COG:NMA2079 KEGG:ns NR:ns ## COG: NMA2079 COG3087 # Protein_GI_number: 15794955 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis Z2491 # 1 312 3 287 289 114 40.0 3e-25 MKKSTQYGKGLAGFFFGLILATGIIASILFFLNQGKQNVFKELTQPKQSEEPEILKPQDK AEKRPATDTSSTQADEEKAKAEKEAAEKEAKAKEEAEKAAKEAEEKAQAEKEAQEKAAKA EAEKEATKKKLAEKKAELEKKRAEKVKAENEAANKAAKDKKAADQLTDKQKERAERKLAE KKAAEAKKQNKPTPEQILNSGSIEKARKAANASATKESSNAVSKQSAEKAETAANSGKKA FLQLGSYADRSSADSQRAKLAILGVSSKVVESQNGDKTIYRVQSNTMPQEAAVKLQKNLQ GHNINSLIRSTK >gi|241320312|gb|ACQV01000017.1| GENE 11 12471 - 13112 754 213 aa, chain + ## HITS:1 COG:NMB0407 KEGG:ns NR:ns ## COG: NMB0407 COG0526 # Protein_GI_number: 15676320 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 15 211 13 208 214 255 63.0 5e-68 MKQSIKQTIAALGLSLLSLSAQAATEGVDYTVLSRPIPQQQAGKIEVLEFFGYFCVHCYH LDPVLLQHSKTFAKDVSLRTEHVVWMPEMLGLAKIAAAVNLSGLKYQANPVIFKAVYEQK INLADTNVFRSWVGKQTSFDSKKLLQTYNSPAAASAAAKMQQLTETYRIENTPTVIVGGK YKVNFNGTDWKAGMKTIDELIVKVRREQSSKPL >gi|241320312|gb|ACQV01000017.1| GENE 12 13157 - 13981 815 274 aa, chain + ## HITS:1 COG:NMB0408 KEGG:ns NR:ns ## COG: NMB0408 COG1968 # Protein_GI_number: 15676321 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Neisseria meningitidis MC58 # 1 272 1 272 273 391 73.0 1e-109 MDILILFKTLILGIIEGLTEFLPISSTGHLIVLGDLMNFQSNGKVFEIAIQLGAVLAVVF EYRQRFTHIIKGLGKERTANRFVLNLFIAFIPAAIVGLLFSKQIKLHLFNPITVATMLVL GGFFILWVEKRQAKTKPKVNHVDDMRPIDAFVVGCAQICALIPGTSRSGSTIMGGMLWGL ERKTATEFSFFLAVPMMIAATGYDILKNYKLFTLQDVGQIAIGFIAAFIAGLLAVKALLK FVSSKNYVPFAYYRIVFGGLILLTWMLGWVSWSE >gi|241320312|gb|ACQV01000017.1| GENE 13 14064 - 14558 100 164 aa, chain - ## HITS:1 COG:NMB2016 KEGG:ns NR:ns ## COG: NMB2016 COG4968 # Protein_GI_number: 15677841 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Neisseria meningitidis MC58 # 14 160 2 146 149 162 49.0 3e-40 MYLNVFDGKRNRATVQRGYSLIQLLVVMLLVSILVTVAFTVYRESVRSANLRAAHAALLE NARFMEQFYTKKGSFKLTSTKWPELPVKEAGGFCIRMSGQAKGILEGKFTLKAVALDREA EPRVLRLNESLTAVVCGKMKVKGSCTDGEEIFRGNDTECKPFGA >gi|241320312|gb|ACQV01000017.1| GENE 14 14755 - 15144 328 129 aa, chain - ## HITS:1 COG:NMA1253 KEGG:ns NR:ns ## COG: NMA1253 COG3039 # Protein_GI_number: 15794187 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 129 207 335 335 237 92.0 4e-63 MHITPANTHECKHLSPLLESIAEGTTVYADKGYDSAENRQHLEEHQLLDGIMRKAHRNRP LTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAA NRLSVPVAA >gi|241320312|gb|ACQV01000017.1| GENE 15 15325 - 15507 170 60 aa, chain - ## HITS:1 COG:NMA1738 KEGG:ns NR:ns ## COG: NMA1738 COG3039 # Protein_GI_number: 15794631 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 60 110 169 283 114 96.0 5e-26 MELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDAR >gi|241320312|gb|ACQV01000017.1| GENE 16 15661 - 15834 198 57 aa, chain - ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 57 12 68 335 114 94.0 4e-26 MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTHYLRDHRGRPTYPLLSMFKAVLRGQ >gi|241320312|gb|ACQV01000017.1| GENE 17 16070 - 16357 370 95 aa, chain - ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 81 107 187 205 94 66.0 5e-20 MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEE LKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK >gi|241320312|gb|ACQV01000017.1| GENE 18 16409 - 16564 71 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLFQAVNTVTYADRATAHTHINAYAILTQISFDFKYSKQLTVTFSTFVQE >gi|241320312|gb|ACQV01000017.1| GENE 19 16529 - 16708 64 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGAFYMPVGSIGLAIGDGVRGARILMNRYLLSVRAFLVFGLCMITLLLFLNKSTESYG Prediction of potential genes in microbial genomes Time: Thu May 26 11:35:29 2011 Seq name: gi|241320168|gb|ACQV01000018.1| Neisseria flavescens SK114 ctg1118407793879, whole genome shotgun sequence Length of sequence - 126707 bp Number of predicted genes - 122, with homology - 121 Number of transcription units - 61, operones - 35 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 92 - 166 64.3 # Glu TTC 0 0 - TRNA 179 - 255 81.7 # Arg ACG 0 0 - Term 1758 - 1796 8.5 2 1 Op 2 . - CDS 1803 - 3062 1830 ## COG1158 Transcription termination factor - Prom 3156 - 3215 5.5 - Term 3189 - 3237 -0.9 3 2 Tu 1 2/0.267 - CDS 3307 - 4209 659 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 4216 - 4267 16.1 4 3 Op 1 1/0.400 - CDS 4293 - 5981 2561 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 5 3 Op 2 . - CDS 6087 - 6866 1041 ## COG1349 Transcriptional regulators of sugar metabolism - Term 6878 - 6923 11.1 6 3 Op 3 1/0.400 - CDS 6939 - 7652 881 ## COG1802 Transcriptional regulators - Prom 7809 - 7868 7.0 - Term 7815 - 7862 8.0 7 4 Tu 1 . - CDS 7915 - 8334 583 ## COG1765 Predicted redox protein, regulator of disulfide bond formation - Prom 8364 - 8423 4.4 8 5 Tu 1 . - CDS 8447 - 9256 893 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 9398 - 9457 5.1 - Term 9404 - 9461 11.4 9 6 Op 1 . - CDS 9481 - 12333 3797 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 10 6 Op 2 . - CDS 12389 - 12940 241 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Prom 12974 - 13033 2.7 - Term 12955 - 12995 8.2 11 7 Op 1 . - CDS 13048 - 13431 739 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 12 7 Op 2 . - CDS 13483 - 14100 479 ## NGO1405 hypothetical protein 13 7 Op 3 . - CDS 14170 - 15270 1688 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) + Prom 15629 - 15688 4.9 14 8 Tu 1 . + CDS 15785 - 17296 2071 ## COG0661 Predicted unusual protein kinase + Term 17328 - 17371 11.1 - Term 17312 - 17362 13.1 15 9 Op 1 2/0.267 - CDS 17372 - 18742 1060 ## COG0038 Chloride channel protein EriC 16 9 Op 2 2/0.267 - CDS 18820 - 20040 1533 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 17 9 Op 3 23/0.000 - CDS 20083 - 20781 735 ## COG1346 Putative effector of murein hydrolase 18 9 Op 4 . - CDS 20781 - 21125 269 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 21176 - 21235 5.5 - Term 21212 - 21251 -0.6 19 10 Op 1 . - CDS 21311 - 22057 653 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Term 22058 - 22097 6.2 20 10 Op 2 . - CDS 22107 - 22571 644 ## COG0315 Molybdenum cofactor biosynthesis enzyme - Prom 22595 - 22654 4.2 + Prom 22661 - 22720 4.3 21 11 Tu 1 . + CDS 22759 - 25461 4236 ## COG2352 Phosphoenolpyruvate carboxylase + Term 25477 - 25516 10.0 + Prom 25514 - 25573 5.6 22 12 Op 1 . + CDS 25601 - 26692 1833 ## COG0012 Predicted GTPase, probable translation factor + Term 26697 - 26746 0.5 23 12 Op 2 . + CDS 26756 - 27577 173 ## gi|241759437|ref|ZP_04757541.1| hypothetical protein NEIFL0001_1910 24 12 Op 3 . + CDS 27640 - 28938 820 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 28974 - 29024 4.4 - Term 29034 - 29072 6.9 25 13 Tu 1 . - CDS 29111 - 30007 1012 ## COG1281 Disulfide bond chaperones of the HSP33 family - Prom 30181 - 30240 3.3 + Prom 30117 - 30176 4.3 26 14 Op 1 . + CDS 30268 - 30897 240 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 27 14 Op 2 . + CDS 30906 - 31127 371 ## NMC1979 hypothetical protein + Term 31149 - 31187 10.2 - Term 31132 - 31180 15.8 28 15 Op 1 . - CDS 31207 - 32607 2033 ## COG1760 L-serine deaminase - Term 32620 - 32657 9.1 29 15 Op 2 . - CDS 32673 - 34562 2401 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 34589 - 34648 6.3 + Prom 34612 - 34671 5.1 30 16 Op 1 . + CDS 34696 - 35253 790 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) 31 16 Op 2 2/0.267 + CDS 35317 - 35739 495 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 32 16 Op 3 2/0.267 + CDS 35813 - 36184 567 ## COG3759 Predicted membrane protein 33 16 Op 4 . + CDS 36291 - 36926 214 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 + Term 37022 - 37065 10.0 + Prom 37047 - 37106 4.3 34 17 Tu 1 . + CDS 37260 - 38846 2246 ## COG1620 L-lactate permease + Term 38863 - 38899 2.2 + Prom 39018 - 39077 4.3 35 18 Tu 1 . + CDS 39144 - 39506 542 ## DNO_0725 potential adhesin complex protein + Term 39551 - 39592 11.3 - Term 39590 - 39623 5.1 36 19 Op 1 16/0.000 - CDS 39646 - 40749 1611 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 40780 - 40839 4.6 37 19 Op 2 . - CDS 40856 - 42424 2071 ## COG0593 ATPase involved in DNA replication initiation - Prom 42607 - 42666 5.1 + Prom 42650 - 42709 6.2 38 20 Op 1 . + CDS 42740 - 42874 218 ## PROTEIN SUPPORTED gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 39 20 Op 2 16/0.000 + CDS 42943 - 43218 156 ## COG0594 RNase P protein component 40 20 Op 3 18/0.000 + CDS 43215 - 43436 145 ## COG0759 Uncharacterized conserved protein + Prom 43446 - 43505 3.6 41 20 Op 4 . + CDS 43555 - 45201 2555 ## COG0706 Preprotein translocase subunit YidC + Term 45223 - 45258 6.1 - Term 45211 - 45245 5.9 42 21 Op 1 3/0.200 - CDS 45297 - 46007 449 ## COG0313 Predicted methyltransferases - Term 46016 - 46060 9.0 43 21 Op 2 . - CDS 46062 - 46670 364 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 46690 - 46749 1.7 + Prom 46629 - 46688 5.4 44 22 Op 1 20/0.000 + CDS 46708 - 47211 555 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 45 22 Op 2 2/0.267 + CDS 47245 - 47424 309 ## PROTEIN SUPPORTED gi|225077262|ref|ZP_03720461.1| hypothetical protein NEIFLAOT_02317 + Prom 47432 - 47491 2.6 46 22 Op 3 2/0.267 + CDS 47517 - 48041 932 ## COG2236 Predicted phosphoribosyltransferases + Term 48067 - 48127 7.1 47 23 Op 1 16/0.000 + CDS 48164 - 49225 1577 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme + Term 49238 - 49286 10.4 + Prom 49232 - 49291 4.0 48 23 Op 2 2/0.267 + CDS 49378 - 50340 1321 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III + Term 50345 - 50389 9.8 49 24 Op 1 2/0.267 + CDS 50392 - 50739 324 ## COG3326 Predicted membrane protein 50 24 Op 2 . + CDS 50749 - 51675 1661 ## COG0331 (acyl-carrier-protein) S-malonyltransferase + Term 51686 - 51722 4.8 + Prom 52287 - 52346 1.5 51 25 Op 1 . + CDS 52368 - 52466 118 ## 52 25 Op 2 . + CDS 52514 - 53023 60 ## Coch_0966 hypothetical protein + Prom 53059 - 53118 7.5 53 26 Tu 1 . + CDS 53145 - 53993 197 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 54099 - 54143 1.4 + Prom 54069 - 54128 4.6 54 27 Op 1 . + CDS 54213 - 54824 199 ## gi|241759408|ref|ZP_04757512.1| hypothetical protein NEIFL0001_1941 + Term 54834 - 54873 -0.9 + Prom 54826 - 54885 1.6 55 27 Op 2 . + CDS 54906 - 55652 256 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 55671 - 55708 9.1 + Prom 55693 - 55752 6.2 56 28 Tu 1 . + CDS 55921 - 57903 766 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 57911 - 57955 3.1 + TRNA 57973 - 58048 95.7 # Val TAC 0 0 + TRNA 58082 - 58158 93.9 # Asp GTC 0 0 + TRNA 58198 - 58273 95.7 # Val TAC 0 0 + TRNA 58306 - 58382 93.9 # Asp GTC 0 0 - Term 58612 - 58659 15.0 57 29 Op 1 . - CDS 58672 - 60084 1568 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 58 29 Op 2 . - CDS 60154 - 61581 1471 ## COG0477 Permeases of the major facilitator superfamily - Prom 61684 - 61743 5.4 + Prom 61624 - 61683 5.0 59 30 Tu 1 . + CDS 61717 - 62283 934 ## COG0431 Predicted flavoprotein + Term 62302 - 62346 9.8 + Prom 62347 - 62406 3.3 60 31 Op 1 40/0.000 + CDS 62430 - 63107 1209 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 61 31 Op 2 . + CDS 63137 - 64450 1830 ## COG0642 Signal transduction histidine kinase + Term 64518 - 64559 10.0 - Term 64492 - 64562 17.0 62 32 Op 1 20/0.000 - CDS 64580 - 65659 1443 ## COG0337 3-dehydroquinate synthetase 63 32 Op 2 8/0.000 - CDS 65682 - 66194 757 ## COG0703 Shikimate kinase - Term 66268 - 66314 9.5 64 32 Op 3 6/0.133 - CDS 66327 - 68459 2782 ## COG4796 Type II secretory pathway, component HofQ 65 32 Op 4 6/0.133 - CDS 68480 - 69022 500 ## COG3168 Tfp pilus assembly protein PilP 66 32 Op 5 6/0.133 - CDS 69038 - 69709 967 ## COG3167 Tfp pilus assembly protein PilO 67 32 Op 6 8/0.000 - CDS 69709 - 70332 664 ## COG3166 Tfp pilus assembly protein PilN 68 32 Op 7 . - CDS 70337 - 71428 1170 ## COG4972 Tfp pilus assembly protein, ATPase PilM - Prom 71561 - 71620 6.6 69 33 Op 1 . + CDS 71609 - 73978 3150 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Term 73992 - 74028 8.9 70 33 Op 2 . + CDS 74044 - 74880 1008 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 71 34 Tu 1 . + CDS 74953 - 75318 445 ## gi|241759420|ref|ZP_04757524.1| conserved hypothetical protein + Term 75442 - 75473 -0.8 72 35 Tu 1 . - CDS 75365 - 76426 519 ## COG2931 RTX toxins and related Ca2+-binding proteins 73 36 Op 1 . - CDS 76679 - 77191 125 ## gi|241759445|ref|ZP_04757549.1| hypothetical protein NEIFL0001_1965 74 36 Op 2 . - CDS 77231 - 78010 342 ## gi|241759422|ref|ZP_04757526.1| hypothetical protein NEIFL0001_1966 - Prom 78182 - 78241 2.0 - Term 78190 - 78238 11.6 75 37 Tu 1 . - CDS 78265 - 79479 1402 ## COG0477 Permeases of the major facilitator superfamily - Prom 79527 - 79586 3.4 - Term 79668 - 79726 20.2 76 38 Op 1 . - CDS 79918 - 80046 159 ## gi|261365136|ref|ZP_05978019.1| conserved hypothetical protein 77 38 Op 2 . - CDS 80068 - 80700 1122 ## plu3514 hypothetical protein 78 38 Op 3 . - CDS 80724 - 81182 432 ## gi|261365136|ref|ZP_05978019.1| conserved hypothetical protein - Term 81238 - 81266 1.0 79 39 Tu 1 . - CDS 81290 - 82030 1206 ## PAU_01244 hypothetical protein - Prom 82191 - 82250 3.7 + Prom 82150 - 82209 3.7 80 40 Tu 1 . + CDS 82314 - 83156 1193 ## COG0121 Predicted glutamine amidotransferase + Prom 83186 - 83245 8.3 81 41 Op 1 14/0.000 + CDS 83356 - 83808 564 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 82 41 Op 2 . + CDS 83823 - 84926 1107 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis + Prom 85311 - 85370 7.0 83 42 Tu 1 . + CDS 85500 - 86807 1972 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 84 43 Op 1 . + CDS 86976 - 88403 1260 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 85 43 Op 2 . + CDS 88491 - 89756 1229 ## MS1493 hypothetical protein 86 43 Op 3 25/0.000 + CDS 89753 - 90823 1517 ## COG0438 Glycosyltransferase 87 43 Op 4 12/0.000 + CDS 90837 - 92009 1723 ## COG0438 Glycosyltransferase 88 43 Op 5 . + CDS 92002 - 92619 792 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 89 43 Op 6 . + CDS 92606 - 93580 1295 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 90 43 Op 7 . + CDS 93573 - 94265 572 ## COG1011 Predicted hydrolase (HAD superfamily) 91 43 Op 8 . + CDS 94279 - 95058 1119 ## COG0223 Methionyl-tRNA formyltransferase 92 43 Op 9 7/0.067 + CDS 95051 - 96226 1612 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 93 44 Op 1 1/0.400 + CDS 96335 - 98236 2504 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 94 44 Op 2 6/0.133 + CDS 98280 - 99407 1548 ## COG1596 Periplasmic protein involved in polysaccharide export + Prom 99413 - 99472 2.2 95 45 Op 1 3/0.200 + CDS 99579 - 100028 538 ## COG0394 Protein-tyrosine-phosphatase 96 45 Op 2 . + CDS 100055 - 102214 3262 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis + Term 102222 - 102265 7.0 + Prom 102269 - 102328 3.8 97 46 Op 1 . + CDS 102350 - 103339 1386 ## COG0240 Glycerol-3-phosphate dehydrogenase 98 46 Op 2 . + CDS 103414 - 103737 566 ## NGK_2214 hypothetical protein 99 46 Op 3 2/0.267 + CDS 103749 - 104051 532 ## COG3027 Uncharacterized protein conserved in bacteria + Term 104249 - 104280 2.5 + Prom 104333 - 104392 7.7 100 47 Op 1 59/0.000 + CDS 104419 - 104850 755 ## PROTEIN SUPPORTED gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 101 47 Op 2 . + CDS 104863 - 105255 654 ## PROTEIN SUPPORTED gi|225076946|ref|ZP_03720145.1| hypothetical protein NEIFLAOT_01998 + Term 105271 - 105316 3.7 + Prom 105260 - 105319 3.1 102 48 Tu 1 1/0.400 + CDS 105339 - 105848 299 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 105886 - 105945 8.0 103 49 Op 1 2/0.267 + CDS 106188 - 106625 735 ## COG1846 Transcriptional regulators 104 49 Op 2 2/0.267 + CDS 106636 - 107136 447 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 105 49 Op 3 . + CDS 107222 - 107917 850 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) + Term 107925 - 107957 4.0 - Term 107947 - 107999 11.4 106 50 Op 1 . - CDS 108011 - 108913 628 ## COG2962 Predicted permeases 107 50 Op 2 2/0.267 - CDS 108953 - 110023 669 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase - Term 110046 - 110101 7.1 108 51 Op 1 8/0.000 - CDS 110123 - 111310 1388 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 109 51 Op 2 3/0.200 - CDS 111303 - 113318 2261 ## COG1333 ResB protein required for cytochrome c biosynthesis - Prom 113392 - 113451 3.9 110 52 Tu 1 . - CDS 113523 - 114146 1006 ## COG2863 Cytochrome c553 - Prom 114227 - 114286 6.5 + Prom 114146 - 114205 5.9 111 53 Tu 1 . + CDS 114362 - 115003 873 ## COG0218 Predicted GTPase + Term 115015 - 115069 4.2 + Prom 115348 - 115407 5.9 112 54 Tu 1 . + CDS 115456 - 115809 422 ## gi|284800141|ref|ZP_05985805.2| peptidase propeptide and YPEB domain protein + Term 115826 - 115873 17.0 - Term 115812 - 115860 17.2 113 55 Op 1 . - CDS 115911 - 116129 169 ## NMA0634 hypothetical protein 114 55 Op 2 . - CDS 116107 - 116340 513 ## COG2501 Uncharacterized conserved protein - Prom 116361 - 116420 5.5 + Prom 116360 - 116419 4.7 115 56 Tu 1 . + CDS 116507 - 119941 4305 ## COG0587 DNA polymerase III, alpha subunit + Term 119949 - 119991 8.1 - Term 120209 - 120239 -1.0 116 57 Tu 1 . - CDS 120286 - 120621 539 ## FTN_0764 hypothetical protein - Prom 120698 - 120757 7.1 + Prom 120741 - 120800 11.7 117 58 Op 1 . + CDS 120912 - 121406 448 ## COG4127 Uncharacterized conserved protein 118 58 Op 2 . + CDS 121428 - 122279 961 ## COG0668 Small-conductance mechanosensitive channel 119 58 Op 3 . + CDS 122349 - 123215 1201 ## Vapar_0507 hypothetical protein + Term 123286 - 123330 2.0 + Prom 123228 - 123287 2.1 120 59 Tu 1 . + CDS 123337 - 125373 3352 ## COG0339 Zn-dependent oligopeptidases + Term 125414 - 125453 9.1 - Term 125661 - 125718 7.0 121 60 Tu 1 . - CDS 125732 - 125995 340 ## NMO_1729 hypothetical protein - Prom 126021 - 126080 6.7 + Prom 125970 - 126029 8.4 122 61 Tu 1 . + CDS 126230 - 126649 475 ## COG1981 Predicted membrane protein Predicted protein(s) >gi|241320168|gb|ACQV01000018.1| GENE 1 388 - 1746 1162 452 aa, chain - ## HITS:1 COG:PA3043 KEGG:ns NR:ns ## COG: PA3043 COG0232 # Protein_GI_number: 15598239 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Pseudomonas aeruginosa # 5 447 1 438 443 348 42.0 1e-95 MTIRMNWQNLLSTQRFRTKNGEIVPTVTPSTQEGADALRTDFHIDYDRVVFSGAFRRLGR KTQVHPLAQHDLTHNRLTHSVEVASVGRSLGNRVGVMLHNGGFLPQGNTPSDIGAVVQVA CLAHDLGNPPFGHTGEDALRDWFRRPEHQIYLNALNEAERNDIQTYEGNAHSLRIVASLE MYPEAGGMRLTAAAIGALLKYPWTTQHPNGRKKFNIYQTELPFIRQVADELGLVSAGVDS WARHPLSYLMEAADDICYALLDLEDAVELDLLTDTEVESILSELTFAESAWHASSSRQRC AMLRGIAIGKAIDDVAQTFMLHQSDLLDGTFKGKDLLALCSPQVQNTLAKAKELAQTRIF RHHTKLLTEIATFPCLGSILDLLVPAAYALIAEKQLATRQSLALELLKKYNPILPEDSLY QAYMKILDFVGGMTDNSAAKMAQDLSGVGILR >gi|241320168|gb|ACQV01000018.1| GENE 2 1803 - 3062 1830 419 aa, chain - ## HITS:1 COG:NMB0617 KEGG:ns NR:ns ## COG: NMB0617 COG1158 # Protein_GI_number: 15676520 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 419 1 419 419 795 95.0 0 MHVSELQTLHISKLLEMAEEHGIENANRFRKQDLVFAIVRQMMKQNVSFTCSGTLEILPD GFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDTIN GDQPEVCKHKILFENLTPLFPTEQFKLERDIKAEENLTGRAIDLVSPIGKGQRALLVAPP KTGKTVMLQNIAHAITANYPDVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPAQRHV QVAEMVIEKAKRMVEHKKDVVILLDSITRLARAYNTVVPTSGKILTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAISI NKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEATEFLVGKLKDSKNNDDFFELMRGK >gi|241320168|gb|ACQV01000018.1| GENE 3 3307 - 4209 659 300 aa, chain - ## HITS:1 COG:BS_yyaM KEGG:ns NR:ns ## COG: BS_yyaM COG0697 # Protein_GI_number: 16081133 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 290 1 285 305 103 26.0 4e-22 MERYSVHLKLLGMAVLWGASWPMGRMLGQSLPPLTGGAVRFVLASVLLLGWLFARSRFAT LAALSARQWLGLAVAASVGVCGYAVFFMLGLQAMPAGKAAVVVAVNPVLTLLLAAWLFGE RLNAKILAGMLLAVSGAIVAVTQGQPLAVLSGGIKEGEWLIFGCVVCWAAYTLIGRAVLR GIDALTVTAATSLIGALMLSVVALWVDGLPFEAMAAMDGRGWTALAWLVIGATVLAYAWY FEGVKTLGAGSAAAYITLVPIFGVLSSAWFLGEPLHISLVAGCAAAVGGMTLMRYGQKAV >gi|241320168|gb|ACQV01000018.1| GENE 4 4293 - 5981 2561 562 aa, chain - ## HITS:1 COG:NMA1748 KEGG:ns NR:ns ## COG: NMA1748 COG0008 # Protein_GI_number: 15794641 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 562 12 573 573 1129 96.0 0 MLNKDQFADNHFIRTIIEEDLKSGKHEAIQTRFPPEPNGYLHIGHAKSICLNFGLAYIYD GLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWSGEPRFASNYFDQLYDYAVGLIKDGK AYVDDLTPEEMREYRGTLTEAGKNSPYRDRSVEENLDLFTRMKNGEFPDGSKTLRLKIDM ASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISDAIEGITHSLCTLEFEAHRP LYDWVLDNIPAPHATRPRQYEFSRLELLYSITSKRKLNQLVSDGHVAGWDDPRMPTISGM RRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGAIREELENSAPRLMAVLNPLKVTLTNF EAGKTQSRRAAFHPNHEEMGEREIPVSQTIYIEADDFAENPPKGFKRLTPGGEVRLRHGY VIKCDEVVKDAAGNVVELKCSIDHDTLGKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLF TVERPDAVRGEDGEYLPFTDFLNPESAKEITAYAEPAAKNLPAESRWQFERLGYFVTDRK DHRPEQPVFNRTVTLKDSWQPK >gi|241320168|gb|ACQV01000018.1| GENE 5 6087 - 6866 1041 259 aa, chain - ## HITS:1 COG:NMB1561 KEGG:ns NR:ns ## COG: NMB1561 COG1349 # Protein_GI_number: 15677412 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Neisseria meningitidis MC58 # 1 257 1 257 257 364 74.0 1e-101 MKPKIQRHEHILTLVREHNFMTVEELAANLDVTPQTIRRDVQELSETGQLKRYHGGAALG DVSVVTAGQERRNHQQQEKNAIARLIASTIPDNASLFISIGTTMEAVAAELVRQRKNLRI ITNNIYAASITAARTDYTVIIASGVVRPLDGGITGVATVDFINQFKVDYAIMSTHGIEND GSLLDDDYKEVSVMQAMMNNARVRYLGVDHSKFNSNALVRLGDIGAFDKLFTDRPPSAAM QKTLNERGVAWQVADPVSK >gi|241320168|gb|ACQV01000018.1| GENE 6 6939 - 7652 881 237 aa, chain - ## HITS:1 COG:NMA1751 KEGG:ns NR:ns ## COG: NMA1751 COG1802 # Protein_GI_number: 15794644 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 236 1 237 238 360 80.0 1e-100 MDYENNTNVAPATSSLILEERHDSELFRVYALILDGITDHLLLPGKKLTESELCRQMVCS RNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMKDVFNTRIEMESMILSVLIDMPDLE TRLQPLYAMIEQEGAASESGDRVGWNRLSNAFHVELARLLDNDVLFEIMNTLCARSSLIV AVSDPLRKEKRNIDSNSHHEHREILDLLLAGKRNRVTKVIRRHLGACMERLEQKLEM >gi|241320168|gb|ACQV01000018.1| GENE 7 7915 - 8334 583 139 aa, chain - ## HITS:1 COG:NMB1564 KEGG:ns NR:ns ## COG: NMB1564 COG1765 # Protein_GI_number: 15677415 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis MC58 # 1 135 1 135 140 228 88.0 3e-60 MQVTSKWIDGMCFVGTTANGHSVVMEGAAAEGEVKRGPSPMEMLLLGVAGCSSIDVVMIA EKQRQKITDCRAEVTAKRADTAPRVFTEIHIHFKVYGRGLQESAIERAVQMSAEKYCSAS IMLGKAAKMSHSFEIVETE >gi|241320168|gb|ACQV01000018.1| GENE 8 8447 - 9256 893 269 aa, chain - ## HITS:1 COG:NMA1815 KEGG:ns NR:ns ## COG: NMA1815 COG0351 # Protein_GI_number: 15794705 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Neisseria meningitidis Z2491 # 1 268 1 268 268 407 79.0 1e-113 MDELFIQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTSVLTAVTAQNTLGVSAVHPIPTD IIAAQIAAIQEDFQIRAYKIGMLGTVEIIECVAEQTAECDFGKRVLDPVMIAKGGAPLLE NSAVEAMKRLLLPHTDVLTPNLPEAQALTGINIENRQDAERAAKILQDWGVKNVVIKGGH LADSQSEYCTDWLFMPYETIELNSKRFPTPHTHGTGCTFSACITAELAKGFSVPEAVQTA KNYIAAAISHPLGIGAGNGPVNHWAYRDE >gi|241320168|gb|ACQV01000018.1| GENE 9 9481 - 12333 3797 950 aa, chain - ## HITS:1 COG:NMA1934_2 KEGG:ns NR:ns ## COG: NMA1934_2 COG1003 # Protein_GI_number: 15794817 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Neisseria meningitidis Z2491 # 446 950 1 505 505 957 93.0 0 MKLSELFNPNEFAARHLSFGDEAALLEALGEKSMDDFVGNTVPQSIRMPSELDLPEALTE ADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENPGWYTAYTPYQAEIAQGRL EALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRVGKVKTERFFVDARVYPQTLD VMKTRAKYFGFELVVGDFAQADEGEYFGALLQYVGKDGDVQDLQDVIGRLKAKGTIVAVA ADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGPHAAYFAFKDEFKRSAPGRIIGVSK DASGKPALRMALSTREQHIRREKATSNICTAQALLANLAGMYAVYHGPEGVKRIANRIHA LASAFADALVSDGLNVVHKVFFDTVTVDFGSKEKADQVFAAALESGYNLRRVNDTQVAAA FHETSAYEDLVDLYRAFTGKDTFTFADDVKGRLNAELLRQDDILQHPVFNSYHTEHEMLR YLKKLEDRDLAMNRSMISLGSCTMKLNATAEMLPITWAEFTDIHPYAPEAQTAGYRELLA DMENSLKAITGFDAISFQPNSGAQGEYSGMLSIRRYQEANGEGHRNICLIPKSAHGTNPA TAAMLGLKVVVVDTDEHGNVNIDDLKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRI IHENGGQVYMDGANLNAQIGIMQPAEVGADVLHMNLHKTFCIPHGGGGPGIGPIGLKAHL APFAPGHVVTDMHNASADQTAVAAAAYGSASILPITWMYLTMMGKQGMEQATRWALLNAN YVAKRLSEDYPILYTGKNGRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFP VAGTLMIEPTESESKAELDRFIAALKQIKQEVLKVERGEWPKEDNPLVNAPHTASDVTGE WTHPYSREEAVFPLPFVREHKFWPSVKRVDEVYGDRNLICSCLPIDAYED >gi|241320168|gb|ACQV01000018.1| GENE 10 12389 - 12940 241 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 18 166 13 179 185 97 33 3e-19 MNYCEFVDTLPDDTDNPNKHYHDTQYGFPIEDDNELFERLVLEINQAGLSWTLMLKKQQA FQTAFKGFDIDTVAAFDETDIERLLADAGIVRNRLKINAAIYNARQIKQIQQEYGSFKNW LDANHPLDKAEWVKLFKKHFKFVGGEIVGEFLMSTGYLSGAHIESCPVYREILACRPKWA EAV >gi|241320168|gb|ACQV01000018.1| GENE 11 13048 - 13431 739 127 aa, chain - ## HITS:1 COG:NMB0575 KEGG:ns NR:ns ## COG: NMB0575 COG0509 # Protein_GI_number: 15676480 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Neisseria meningitidis MC58 # 2 126 3 127 128 214 96.0 4e-56 MSNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFVELPEVGANLVAEEQAGV VESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGWFFKIKPANPADYDGLLTAE QYAGEVA >gi|241320168|gb|ACQV01000018.1| GENE 12 13483 - 14100 479 205 aa, chain - ## HITS:1 COG:no KEGG:NGO1405 NR:ns ## KEGG: NGO1405 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 27 205 1 179 179 303 90.0 2e-81 MKATFGSLLLLLMLSACASSAGERGLMFFDTEGKSRTTTFMKTVGGNGKIASEVMIDGEY ALDIIRMNDDLSIAVQDNKGRSRAADLKSLSQAKSFTLFAFSRYAGTVEVDKVSAVTGIC ADYRSKGLKVAVADNMSSKQGIVVFRASGVMASNKRKINEAYLDYSASPKLPSAQKQKLE QDKNNMIAVHYGRLEELIARGICAR >gi|241320168|gb|ACQV01000018.1| GENE 13 14170 - 15270 1688 366 aa, chain - ## HITS:1 COG:NMB0574 KEGG:ns NR:ns ## COG: NMB0574 COG0404 # Protein_GI_number: 15676479 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Neisseria meningitidis MC58 # 1 366 1 366 366 715 99.0 0 MTALKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRTDAGMFDVSHMLVTDVA GANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLIVYRTNEAETQYRIVSNGA TREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKLLTVKPEWADVVHNLKPFQGA DLGNDWFVARTGYTGEDGVEVILPDTEAVAFFKALQAAGVQPCGLGARDTLRMEAGMNLY GNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLALKEKGVAVKQVGLLLEKGGILRAH MEVLTDKGQGETTSGVFSPSLKQSIAIARVPKDFDGDTAKVLMRGKEVDVRVLKLPFVRN GQKQFD >gi|241320168|gb|ACQV01000018.1| GENE 14 15785 - 17296 2071 503 aa, chain + ## HITS:1 COG:NMB0559 KEGG:ns NR:ns ## COG: NMB0559 COG0661 # Protein_GI_number: 15676464 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Neisseria meningitidis MC58 # 1 488 1 488 503 924 93.0 0 MNRLKRIKTILCTLYRYRLAELIASLVRPGWARTFLNMLPQSSKFKHETPAVRLRLALES LGPIFIKFGQVLSTRPDLIPHDYAVELARLQDKVPPFDAQLSRSQIEKSLGQSIDTLYAE FETEPVASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVERLFSDGK RLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTRDVLTIEW MDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIAL DFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPADTRAEELEAAVRAVCEP VFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTA KPFLVRWMNEQVGPKALWRNLKNEAPDWAQIIPSLPRKISALIDENRQQEMRDAYVHLVK VQQRQSLWLGVIAVVLLLILLFK >gi|241320168|gb|ACQV01000018.1| GENE 15 17372 - 18742 1060 456 aa, chain - ## HITS:1 COG:NMA0434 KEGG:ns NR:ns ## COG: NMA0434 COG0038 # Protein_GI_number: 15793439 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis Z2491 # 6 448 4 446 469 613 78.0 1e-175 MKFPQTWAARLAHKIRQTKRLSKKSIALLFLLAGSALVALTALMFAYLADLALEWNALLV GKYPWFAWVALPLGLPLLAWFTRKFAPYTSGSGIPQVIASLSLPYGAQKTRLIRLGETFF KIPLAFCAMLLGASVGREGPSVQVGAAVMNAWGAWCKKHGLAFRGMQENDLIAAGAAGGL AAAFNAPLAGVVFAIEELGRGVLLRWERQILMGVLAAGFIQVAIQGNNPYFSGFQGHELP NMLMWAAVSGIVCGVAGGLFSSFLYRGAAAFAPVRWRSFIRRHLLVVAFAMGILLALLGT FYQGKTYGTGYHEAAAALKGAYEAPFGLAAAKWAATVFSYWAGIPGGIFTPSLTIGAMIG EHIASFAQLGDASNVAVLLCMAAFLAAATQSPLTAAVVVMEMTGGQNLLFWMLLTCIFAS QVSRQFSPHPFYHAAGLRFRRHIEAESGHVQHEKKE >gi|241320168|gb|ACQV01000018.1| GENE 16 18820 - 20040 1533 406 aa, chain - ## HITS:1 COG:NMA0435 KEGG:ns NR:ns ## COG: NMA0435 COG1364 # Protein_GI_number: 15793440 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Neisseria meningitidis Z2491 # 1 406 1 406 406 604 79.0 1e-173 MAVNLTEKRADELLEIDGIRLFTGRAGIKQQDSDDLTLMVLGGGHTVGAVFTQNRFCAAP VHIAKSHLFDQDGVCALVVNTGNANAGTGAQGRLDAIKVCAAAAEQVGCQSNQIMPFSTG VILEPLPVDKIVAALPQVRPAFWSDAARAIMTTDTVPKAASRTGLVGEKHTVRATGIAKG SGMIHPNMATMLSFIATDAKVSQPILQLMTQEIADESFNTITVDGDTSTNDSFVIMATGR CGQSEIDNTADPRYAQLKALLGSLALELAQAIVRDGEGATKFITVEVQNAKTREEARKVA YAVAHSPLVKTAFFASDPNLGRLLAAVGYAGIEDLDVDALKMWLDDVLVAENGSRAESYT EEAGQAVMNRPEITVRIDLQRGDTTAAVYTCDLSHEYVSINADYRS >gi|241320168|gb|ACQV01000018.1| GENE 17 20083 - 20781 735 232 aa, chain - ## HITS:1 COG:NMB2004 KEGG:ns NR:ns ## COG: NMB2004 COG1346 # Protein_GI_number: 15677832 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Neisseria meningitidis MC58 # 3 231 1 229 230 312 77.0 4e-85 MNIDGLLRMPSVMLFLTLAVYALAVQIRARTGNVLCNPVLISTLVLMGYLKVFTIDYELY HSASQFIDFWLKPAVVLLAVPLYRNWDRIRSQWLPVVLSQLAGSVTGIVTGVYFAKWLGA SREVILSLASKSVTNPIAIEITASIGGIPAITAATVIIAGLFGQMAGYKVLKGALYMPSS VGMSLGTASHAMGIAASLEYGRRMAAYAGLGLTLNGVLTAILVPILIPLLGV >gi|241320168|gb|ACQV01000018.1| GENE 18 20781 - 21125 269 114 aa, chain - ## HITS:1 COG:NMB2003 KEGG:ns NR:ns ## COG: NMB2003 COG1380 # Protein_GI_number: 15677831 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Neisseria meningitidis MC58 # 1 111 1 111 115 137 72.0 3e-33 MNIIRALLVVLGCLALGEATVWILGLKLPGSIVGMALLFTALQAGWVKLSWVGELADILM ANLTLFLVPPCVAVISYLDVIANDWFSILTATIGSTICVLLVTGKVHEWVRRWM >gi|241320168|gb|ACQV01000018.1| GENE 19 21311 - 22057 653 248 aa, chain - ## HITS:1 COG:NMB2062 KEGG:ns NR:ns ## COG: NMB2062 COG0476 # Protein_GI_number: 15677884 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Neisseria meningitidis MC58 # 2 247 9 254 256 351 68.0 7e-97 MNDQQLLRFSRHILLDEIGIEGQEKLLSAHVLVVGCGGLGAAALPYLAAAGIGSLTIADA DTIDETNLQRQITFTEADIGKNKALVMQGRLKQINSQTHITAIAEFLDEARLVELANAAD IILDCSDNYPTRQAVNRAAVATRTPLVSAAAVGFDGQIAVYRPDLPDTPCYACLFDGEQA SDGACALFGVFSPLVGVIGTTQAAEALKVLIGIGTPSHGKLSTYNALSGKWQQYGVRRNP ECPVCGSR >gi|241320168|gb|ACQV01000018.1| GENE 20 22107 - 22571 644 154 aa, chain - ## HITS:1 COG:RSc0560 KEGG:ns NR:ns ## COG: RSc0560 COG0315 # Protein_GI_number: 17545279 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Ralstonia solanacearum # 13 132 25 144 158 86 35.0 1e-17 MIEFPNQPDFPEQHTAVAVGTVNMSQQAIRVLIENASEKASILTIARVAAIQSIKQTANL IPLHLPGRIIGVQVDFDINVELACLKATLTVQAHSNGSIATEALTGLNLALLSVYDMMKD VDRNMMLSGIRLESETSSEGRPFLFDNAYENINF >gi|241320168|gb|ACQV01000018.1| GENE 21 22759 - 25461 4236 900 aa, chain + ## HITS:1 COG:NMA0374 KEGG:ns NR:ns ## COG: NMA0374 COG2352 # Protein_GI_number: 15793382 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Neisseria meningitidis Z2491 # 1 900 18 917 917 1679 95.0 0 MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLLSTSDDSAALIEKVLPQ LDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGHNSAEGSLTETVRKLKAGKVN GKAVQQQLDNTVVTAVLTAHPTEVQRQTVLSFNRRIRALLPQRERCTNPEALAQLRREID TVLLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEALPKLYRTMERDFQTAYPGVRVPN ILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFRFYRGELDKLYRELPLSIRRVKVND DVMALAALSPDEEIARTEEPYRRAIAYIMARAMGKARSLGLGMGCKFGFLEPYATVEEFL TDLKKLQRSLHENGSQLLAEGRLANIIRSVSVFGFHMMPLDLRQHAGKHADVVAELFQHA GLEDYNSLNEEQKQAALLRELSHQRPLYSPFITYSDHTRHELAIFNEARKIKDEFGEDAV TQSIISNCEQPSDLLALALLLKESGLLVVENGKPHSRINIVPLFETIEALENACPVMETM FRLDWYDALLESRGNIQEIMLGYSDSNKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLF HGRGGSVGRGGGPSYQAILAQPAGSVAGQIRITEQGEVITAKYADPGNAQRNLETLVAAT LEASILPDKKDPDAKLMQDLSEVSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPA SRKTLARIQDLRAIPWVFSWMQNRLMLPAWYGFGSAVETLCEGNPDTLAALREHAQSNPF FQAMLSNMEQVMAKTDITLAENYAGLSESPDKAKIIFGMIKEEYQRSRKALLDLLQTEEL LRDNRSLARSLALRIPYLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG >gi|241320168|gb|ACQV01000018.1| GENE 22 25601 - 26692 1833 363 aa, chain + ## HITS:1 COG:NMA0618 KEGG:ns NR:ns ## COG: NMA0618 COG0012 # Protein_GI_number: 15793608 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Neisseria meningitidis Z2491 # 1 363 1 363 363 697 98.0 0 MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNP QKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVSGKVD PIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVELCKKLLPHLDEGKPIRS FGLDAEELAMLKPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAEKENAPVVAVCAAM ESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIHKGDT APQAAGVIHTDFERGFIRAQVISYDDFVSLGGEAKAKEAGKMRVEGKEYIVQDGDVMHFL FNV >gi|241320168|gb|ACQV01000018.1| GENE 23 26756 - 27577 173 273 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759437|ref|ZP_04757541.1| ## NR: gi|241759437|ref|ZP_04757541.1| hypothetical protein NEIFL0001_1910 [Neisseria flavescens SK114] # 1 273 1 273 273 458 100.0 1e-127 MKQSYIALITGLIFPTIVAIFAWSLGWITIPDDKLSIDYSYSTKPLFPSENNELLKSLKV SFQGKETQNLNISTIEFINQSPKNLDNLDIQIKWPKNYTLLSSSKNIPIGYSEKSIHDLY NPNESQITYNLQKFDRSNLDSDREIISFTLLFLGDAPLKEEIYISTSTKSIQFTDFDEKR EKINTKTKIFLLIFFIVYLIVLIISLFYANKKSKQKEIEYKEKMENYIKNTIIPRYKILN NSIDQEVDQTFNELKMISLSIYNPKKFKKMNKI >gi|241320168|gb|ACQV01000018.1| GENE 24 27640 - 28938 820 432 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 8 386 13 384 418 320 43 2e-86 MTSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFEGENAAIM ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGA VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL AEEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETL VKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVR RGKRNHALLVWK >gi|241320168|gb|ACQV01000018.1| GENE 25 29111 - 30007 1012 298 aa, chain - ## HITS:1 COG:NMA0441 KEGG:ns NR:ns ## COG: NMA0441 COG1281 # Protein_GI_number: 15793446 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Neisseria meningitidis Z2491 # 4 291 33 320 328 462 80.0 1e-130 MTQNHSDIRTRFIFDDMPIRGMHIRLEKVWHHIVNQKHYPVAIRRALGELLAAGALLSAN LKNEGALIVQVQGQGRLKMLVVEATSENTVHATARWDETAEIRDDESLTELLGENSVFVL THQPKDADPWQGVVPLEGDSIAQMLVNYMKRSEQLDTYITLAADDQAAGALLLQRLPEEE LDDAAWEHVTTLAQTLTSQELTGLDAHHALYRLYHETPPRVFEPETIEFACTCSRGKVSD MLLMLGGQEVGGVVAEQGSIQIDCDFCHTKYVFDETDVNALFGADVVNAVRQENERLQ >gi|241320168|gb|ACQV01000018.1| GENE 26 30268 - 30897 240 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 42 199 24 174 175 97 34 4e-19 MNFLLRLAAVWTSVAMLASVNFSYADDLENLITTRQHVLNQFNDNANVYDNTRQATPVHP VNTHPAPSNNTRAPSGNADELIGSAMGLLGVAYRYGGTSASTGFDCSGFMQHIFKRAMGV NLPRTSAEQAQMGVAVSRSELQPGDMVFFRTMGPGRISHVGLYIGNNNFIHAPRTGKRIE ITSLGHKYWSAKYAFGRRVKKNDPSRFLN >gi|241320168|gb|ACQV01000018.1| GENE 27 30906 - 31127 371 73 aa, chain + ## HITS:1 COG:no KEGG:NMC1979 NR:ns ## KEGG: NMC1979 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 71 1 71 72 114 78.0 1e-24 MAMPQMPKWYDDDGQIVSCTEKVKVMTENLNELYQIAQDAFEDALLMGCSEKQLREYFCD LMAGLENPYQKNG >gi|241320168|gb|ACQV01000018.1| GENE 28 31207 - 32607 2033 466 aa, chain - ## HITS:1 COG:NMB0211 KEGG:ns NR:ns ## COG: NMB0211 COG1760 # Protein_GI_number: 15676137 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Neisseria meningitidis MC58 # 1 466 1 461 461 778 84.0 0 MISIFDIFKIGIGPSSSHTVGPMKAAAAFADLLYAENLDTQVARIVIEVYGSLALTGIGH GTFDALLLGLEGSLPHDIPLADIPQRLERIRTQHVLKLNGREMAFNPEKDLDIRGDKVLP KHPNGLNFIAYNSDGLKLKEQIYYSVGGGFIVTDEGFAQEAQENSDVPYPYKNCDELLAQ CRLNQLNISEVVLANEAALAGCDEAEVRRRVAAVADVMENCIKRGLGAEGQLPGGLNVRR RAPQLAAKLKVLRESEIVNTQLWPMVYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLHYF RKFNPHANQSRVEDFLLTAGAIGILYKTNASISGADVGCQGEVGVACSMAAGAYAEVIGG TPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNGIAAEKALKLATLALLEDGTDKKV SLDEVIQTMLQTGRDMKATYKETSLAGLAITLQKKAVPVSVRVVEC >gi|241320168|gb|ACQV01000018.1| GENE 29 32673 - 34562 2401 629 aa, chain - ## HITS:1 COG:NMA0589 KEGG:ns NR:ns ## COG: NMA0589 COG1154 # Protein_GI_number: 15793580 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 626 1 630 637 1131 87.0 0 MNPSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALH YVYDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSS TSIGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMS ISPNVGALPKYLASNVVRDMHGLLSTIKAQSSKVLDKLPGAMELAQKVENKIKTLAGEAE HAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRGRKGPQLLHVITKKGNGYKFAEND PVKYHAVAKLPSEVPAQEVQPAVVKPTYTQVFGQWLCDQAAADERLIAITPAMREGSGLV EFEQQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLP VLFAIDRAGIVGSDGPTHAGLYDLSFLRCVPNMIIAAPSDENECRLLLSTCYQTNSPSAV RYPRGTGTGATVSDGLETVEIGKGIIRREGEKIAVIAFGSMVAPSLTAADNLNATVADMR FVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLEVLAKHGICKPVLLLGVEDKVTE HGDPKKLLADLGLNAEAVEKHIGGWIETV >gi|241320168|gb|ACQV01000018.1| GENE 30 34696 - 35253 790 185 aa, chain + ## HITS:1 COG:NMA0594 KEGG:ns NR:ns ## COG: NMA0594 COG1949 # Protein_GI_number: 15793584 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Neisseria meningitidis Z2491 # 3 179 2 178 187 311 88.0 4e-85 MTQNANNLCWLDMEMTGLNPEHDRIIEVAMIITDSNLNVLAQSDVYVIHQSDELLNGMDE WNTTTHGRTGLTQRVRESKLTEAEVEQNLLGFMSAWIPEKSTPMCGNSIHQDRRFMVKYM PRLEAYFHYRNLDVSTLKELAKRWNPAVAKSVVKRGSHKALDDILESIEEMRHYREHFLK LPSEQ >gi|241320168|gb|ACQV01000018.1| GENE 31 35317 - 35739 495 140 aa, chain + ## HITS:1 COG:NMB0527 KEGG:ns NR:ns ## COG: NMB0527 COG0720 # Protein_GI_number: 15676434 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Neisseria meningitidis MC58 # 1 140 1 140 140 272 91.0 1e-73 MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSAPVIQGGAKDGMVMDFTDLKAIV KQHITDPFDHAFIYHGNNERESQIAALLEDWNMKTLRLPCRTTAENMSVEMYGRLKNAGV KVCSVKLWETPTSCAEYEGE >gi|241320168|gb|ACQV01000018.1| GENE 32 35813 - 36184 567 123 aa, chain + ## HITS:1 COG:NMA0706 KEGG:ns NR:ns ## COG: NMA0706 COG3759 # Protein_GI_number: 15793684 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 123 182 88.0 9e-47 MKLLSTLLVLFVAVEHFYIAWLEMTQIPSEKASELFNMPYEFMEQKRVQTLFSNQGLYNG FLAIGLVWARFAAPDNAVYGATILFLGFVLIAAAWGAFSSGNKGILLKQGLPAFLAAAAV ITA >gi|241320168|gb|ACQV01000018.1| GENE 33 36291 - 36926 214 211 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 14 211 20 225 225 87 29 4e-16 MTIQITPNNPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLACGWCDTDYLKFGMMSLS DILGRLKTYTARNVIITGGEPTIQPHLNTLLDALKAEGYFLCIETNGLNPAPPQIDYVAT SPKACYAAKYESSCIEKADEVRIVADGDVVAFCQEMERKIRAQHYYLSPCEQDGVMNIYD TIRQIGVLNSRPDAPVHWQLSVQTHKWAGIE >gi|241320168|gb|ACQV01000018.1| GENE 34 37260 - 38846 2246 528 aa, chain + ## HITS:1 COG:NMA0722 KEGG:ns NR:ns ## COG: NMA0722 COG1620 # Protein_GI_number: 15793699 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Neisseria meningitidis Z2491 # 1 528 1 528 528 864 90.0 0 MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAALIYAIKLFYFGNDAMLLNATAASGLV STLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPIAQLMIIGWSFAFMIEGASGF GTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGTPTWFGFAPLGLDQKSIMEIG MRTGVMHFFAGFIIPVIGLSFIVPWAEIRKNLGFIGIAVFSCTLPYVALAMVNEEFPSLV AGAIGLMVSVFAANRGWGLSKDYAKDPNAEKVPFAQVAKALAPLGMLIGMLVITRIKQLG IKGLLTSKEEWFSFQLPFDLSKITVSDSLTITFGNIFGQGVNASYQTLYVPAWIPFVFTV WICILLYKTKFKDAWSFYAATFNQTKKPLLALMGALIMVQLMMVGGDDSMVKIIGKEFAN AAGEHWVYFSPYLGAIGAFFSGSNTVSNLTFGPIQQQIALDTGLSVTLILALQSVGGAMG NMVCINNIIAVCSVLNVNNAEGAIIKKTVIPMSIYGIIAVTVAAIFFF >gi|241320168|gb|ACQV01000018.1| GENE 35 39144 - 39506 542 120 aa, chain + ## HITS:1 COG:no KEGG:DNO_0725 NR:ns ## KEGG: DNO_0725 # Name: not_defined # Def: potential adhesin complex protein # Organism: D.nodosus # Pathway: not_defined # 9 115 8 112 230 66 35.0 2e-10 MKLLSVITAAALATVSFSAAAAPAGFVSYRCDGGKSLNVMYGFDRSGRAVTADVNAGGKK ASLVVDKKRSDSTGTTFTNRRGYAMSAGFIDKNTHTTSEVVGVNAPNGSFLVKNCEPRPR >gi|241320168|gb|ACQV01000018.1| GENE 36 39646 - 40749 1611 367 aa, chain - ## HITS:1 COG:NMB1902 KEGG:ns NR:ns ## COG: NMB1902 COG0592 # Protein_GI_number: 15677733 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Neisseria meningitidis MC58 # 1 367 1 367 367 626 89.0 1e-179 MLILQADRDSLLKPLQAVTGIVERRHTLPILSNVLLESKDGQTKLLATDLEIQINTAGPE SQAGDFRITTNAKKFQDILRALPDSALVSLDWADNRLTLRAGKSRFALQTLPAEDFPLMS VGSDVSATFSLTQETFKTMLSQVQYSMAVQDIRYYLNGLLMQVEGNQLRLVATDGHRLAY AASQIEAELPKTEVILPRKTVLELFKLLNNPSESITVELLDNQVRFQCNGTTIVSKVIDG KFPDFNRVIPLDNDKIFLVSRTQLLGALERAAILANEKFRGARLFLQPGLLSVVCSNNEQ EEAREELEIAYQGGELEVGFNIGYLMDVLRNIHSDDMQLAFGDANRSTLFTVPNNPNFKY IVMPMRI >gi|241320168|gb|ACQV01000018.1| GENE 37 40856 - 42424 2071 522 aa, chain - ## HITS:1 COG:NMA0552 KEGG:ns NR:ns ## COG: NMA0552 COG0593 # Protein_GI_number: 15793546 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis Z2491 # 1 522 1 518 518 852 83.0 0 MTLAEFWPLCLCRLHEMLPAGQFAQWIAPLTVGEENGVWVVYGKNQFACNMLKSQFAAKI DAVRAELVPQQAAFAFKPGVGTHYEMAAQTVAPVQVQEVIEVEECVEPVQMPLQTAAPME ENRPSETVSKPAAAMTAAEILAQRMKNLPHEPQVQTTAPAESKAVVKAKTDAQHDAEEAR YEQTNLSRDYTFETLVEGKGNRLAAAAAQAIAENPGQGYNPFFLYGSTGLGKTHLVQAIG NELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRT MEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRVAIL QKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVSASSRFMNRPAIDMDLARTALQD IIAEKHKVITADIIIDATAKYYRIKISDILGKKRTRNIARPRQVAMSLTKELTTLSLPSI GDAFGGRDHTTVMHGVKAVAKLREEDPELAQDYEKLLILIQN >gi|241320168|gb|ACQV01000018.1| GENE 38 42740 - 42874 218 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15677735|ref|NP_274898.1| 50S ribosomal protein L34 [Neisseria meningitidis MC58] # 1 44 1 44 44 88 100 1e-16 MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV >gi|241320168|gb|ACQV01000018.1| GENE 39 42943 - 43218 156 91 aa, chain + ## HITS:1 COG:NMB1905 KEGG:ns NR:ns ## COG: NMB1905 COG0594 # Protein_GI_number: 15677736 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Neisseria meningitidis MC58 # 2 87 24 109 121 107 73.0 5e-24 MKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHDRNYMKRVIRDWFRLNQHQLSP HDFVVRVRQAFNRETAPEARDQLAQLMKKRR >gi|241320168|gb|ACQV01000018.1| GENE 40 43215 - 43436 145 73 aa, chain + ## HITS:1 COG:NMA0549 KEGG:ns NR:ns ## COG: NMA0549 COG0759 # Protein_GI_number: 15793543 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 13 73 36 96 96 123 98.0 9e-29 MNTLLSKLFLALIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGWLAIKRIAR CHPFGGHGHDPVP >gi|241320168|gb|ACQV01000018.1| GENE 41 43555 - 45201 2555 548 aa, chain + ## HITS:1 COG:NMA0548 KEGG:ns NR:ns ## COG: NMA0548 COG0706 # Protein_GI_number: 15793542 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Neisseria meningitidis Z2491 # 1 548 1 545 545 963 87.0 0 MDFKRLMAFFAISVAIFAGWEHFFPSPKPNPAQQAAQQQTAAAPAKAAAEAALAPASPIT VTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFVLFNDGKEYTYVAQSELLDAQGNNV LKGISFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYLVNIRFDITNSNGQP VNLSADYRIVRDNSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDLDDDAKSGKSEAEYI RKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNLYSASVSVPLATIQA GTKAETAINLYAGPQATSVIANIADKLQLAKDYGKVHWFASPLFWLLNQLHNIIGNWGWA IIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGDDRMVQQQAMMQLYKDEKI NPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRPDPFYILPLIMAVTMFA QTYLNPPSTDPMQAKMMKIMPLVFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIEKQ RAQGEVIS >gi|241320168|gb|ACQV01000018.1| GENE 42 45297 - 46007 449 236 aa, chain - ## HITS:1 COG:NMB1908 KEGG:ns NR:ns ## COG: NMB1908 COG0313 # Protein_GI_number: 15677739 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 236 6 241 241 426 93.0 1e-119 MKPVLYLIPTPLGAPDTPCLLPHEQQAIVGLTDFVVEAEKTARAHLKHLGVTTPIRELNL QTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGP SSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQRSRQQNETQLFIETPYRNDAL LADAVENLHPEARLCVATDLTLPTQEIISQTIAQWRKRKEMPNLKKRPTIFVLHAA >gi|241320168|gb|ACQV01000018.1| GENE 43 46062 - 46670 364 202 aa, chain - ## HITS:1 COG:NMA0546 KEGG:ns NR:ns ## COG: NMA0546 COG0424 # Protein_GI_number: 15793540 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 7 202 1 196 196 291 72.0 5e-79 MFLSKNMEVKLPLVLGSRSVFRCGQLRRLGVDFQTASPDFDETPIEGEHACETALRLAEG KARSLAAAFPAALIIGADQVAWCEGRQLGKPMNVANAQQMLADLSGKRIEFYSAIVLLNT ATGKVQHHVDHTVVTMRRLTQEQISRYLEREPDAVYCAGAAKSEGLGAALLEQIESTDPN ALIGLPIFRLIDFLKNEGVEVL >gi|241320168|gb|ACQV01000018.1| GENE 44 46708 - 47211 555 167 aa, chain + ## HITS:1 COG:NMA0545 KEGG:ns NR:ns ## COG: NMA0545 COG1399 # Protein_GI_number: 15793539 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Neisseria meningitidis Z2491 # 1 167 1 167 167 283 88.0 9e-77 MSYPNLIDPEVFAAEGQNLQGSFLLEELDERVSSHDYPADKQTRVSFTLQGGRDRLQRLF LDLNVKADMPLFCQRCITPMPFLLDETSRIVLFADEESLDEAMLADEELEGMLLEKELDV RTLVEDQILMSLPFSPRHEDCGNNGTLDEVNRDKPNPFAVLAGLKSS >gi|241320168|gb|ACQV01000018.1| GENE 45 47245 - 47424 309 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225077262|ref|ZP_03720461.1| hypothetical protein NEIFLAOT_02317 [Neisseria flavescens NRL30031/H210] # 1 59 1 59 59 123 100 4e-27 MAVQQNKKSPSKRGMHRSHDALTAPSLSVDSATGEVHRPHHISPNGMYRGRKVVKAKGE >gi|241320168|gb|ACQV01000018.1| GENE 46 47517 - 48041 932 174 aa, chain + ## HITS:1 COG:NMA0543 KEGG:ns NR:ns ## COG: NMA0543 COG2236 # Protein_GI_number: 15793537 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 1 174 1 174 175 328 90.0 3e-90 MKRKIWYTYDDIHRVIKGLAEKIQNSGTKYDAMIAIGGGGFIPARMLRCFLEIPIYAVTT AYYDSDNEGQVTEEVKKVQWLDPVPDALKGKNVLVVDEVDDSRVTMEFCLNELLKEDFGT VGVAVLHEKIKAKVGKIPEGIPYFSGITVEDWWINYPWDALDIDEHNKLAAQNQ >gi|241320168|gb|ACQV01000018.1| GENE 47 48164 - 49225 1577 353 aa, chain + ## HITS:1 COG:NMA0542 KEGG:ns NR:ns ## COG: NMA0542 COG0416 # Protein_GI_number: 15793536 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Neisseria meningitidis Z2491 # 1 342 1 342 351 538 86.0 1e-153 MITLAVDAMGGDAGLAMTVPGAVDFLKQQSDVHLIMVGDEAAVRQALSSAGAPMDRITVC HAAQVVEMDEAPQSALKNKKESSMRIAINQVKEGNAQAAVSAGNTGALMATARFVLKTIP GIERPAIAKFLPSDSEHVTLALDLGANVDCTPEQLVQFAIIGSELVHALHPEKGSPRVAL LNVGTEDIKGTDAVKQTFQLLSSSKLNFIGNIESNSVLYGEADVVVADGFVGNVMLKTIE GAVKFMSGAIRREFQSTLFNKLAAIAALPALKGLKGKLDPRKFNGAILLGLRGIVIKSHG GTDEVGFRYALEEAYHEAKSAGLAQIEQGVATQLAALEAAKAELEAAAPTTET >gi|241320168|gb|ACQV01000018.1| GENE 48 49378 - 50340 1321 320 aa, chain + ## HITS:1 COG:NMB1916 KEGG:ns NR:ns ## COG: NMB1916 COG0332 # Protein_GI_number: 15677747 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Neisseria meningitidis MC58 # 1 320 1 320 320 563 89.0 1e-160 MQYAKISGTGSYLPANRVSNDDLAKKVDTSDEWITTRTGIKFRHIADDSEKTSDLAAESA RRALADADLQADDIDLIIVATATPDMQFPSTATIVQQKLGIANGCPAFDVQAVCAGFMYA LTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLSASDEPGIIHSK LKADGNYLNLLNVPGQIANGQICGSPYISMDGPGVFKFAVKMLAKIADDVIEEAGYTTDQ IDWLVPHQANKRIIDSTAKHLGLSMDKVILTVQDHGNTSAASIPLALDVGIKNGQIKRGQ NLLLEGIGGGFAWGAVLVKY >gi|241320168|gb|ACQV01000018.1| GENE 49 50392 - 50739 324 115 aa, chain + ## HITS:1 COG:NMA0537_1 KEGG:ns NR:ns ## COG: NMA0537_1 COG3326 # Protein_GI_number: 15793532 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 6 91 7 92 92 72 50.0 1e-13 MKSLTFALCISSLFLSITAAILPKLATAYLALSAYIFLLYCLDKQRARNHGRRIPEAKLH LLNLLGGWPGGYCGSLAFRHKTSKPNFVRTFRLTAATNTVATLLLLADTLKHSNQ >gi|241320168|gb|ACQV01000018.1| GENE 50 50749 - 51675 1661 308 aa, chain + ## HITS:1 COG:NMA0536 KEGG:ns NR:ns ## COG: NMA0536 COG0331 # Protein_GI_number: 15793531 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 461 89.0 1e-129 MSFAFFFPGQGSQSLGMMNGFAEQAIVKATFDETSAVLGQDLWAMINGEDAELIGQTVNT QPIMLAAGIATYRAYLEAGGKIPSVVAGHSLGEYTALVAAGALDFADAVKLVRLRAELMQ SAVPQGVGAMAAILGLEDEQVKAICAEAAQGEVVEAVNFNSPGQVVIAGNTAAVERAMAA AKEAGAKRALPLPVSVPSHCSLMKPAAEELAEALKDITIKQPQIRVIHNADVASYDDADK IKDALVRQLYSPVHWTETVNALVSEGITESAECGPGKVLAGLAKRINKEAACSALTNADQ VATFIEAH >gi|241320168|gb|ACQV01000018.1| GENE 51 52368 - 52466 118 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLIDVMFLIQMIYTIQNTISFLQQISILTMS >gi|241320168|gb|ACQV01000018.1| GENE 52 52514 - 53023 60 169 aa, chain + ## HITS:1 COG:no KEGG:Coch_0966 NR:ns ## KEGG: Coch_0966 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 45 149 223 327 327 95 47.0 7e-19 MDSRAKVIANFGRYAKTRNKSTDINIFWKRYADGRKIYPDESITLIDKTISFEENIKRAQ HAKVLIDFVIDKHNGLSFRTFEALGNKQKLITTNTQVKYYDFYHPNNFLVWDGYDFAQLD EFLAKPYVDIDEKIRQKYSFKNWISYILQIQPYKEIKLPNPIEDIKVKP >gi|241320168|gb|ACQV01000018.1| GENE 53 53145 - 53993 197 282 aa, chain + ## HITS:1 COG:PA1390 KEGG:ns NR:ns ## COG: PA1390 COG0463 # Protein_GI_number: 15596587 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Pseudomonas aeruginosa # 10 213 1 208 344 120 34.0 3e-27 MHKHQPLISIIIPCYNSANYIKETLSSIYHQSYQNFEIIAIDDGSNDNTLEILYEEAKKE SRLKVLSQENTYCVKARIHAIQYARGDYLVCLDSDDLLGIDYLKVCVDAAEADKKLAIVY TDAFLFGARNEPWKLPKFALPDFLLQNCIYITALIRKKDYDAVGGFDSNMTFIEDWELFI SIIKNGGKVKQIHQPLFYYRQRLDESSVSNLASDIKVSDNLLKIYNKHYDFYKENGIFLQ LLTSYTLKQYELKRKKYNNPLRKYFYKWFNPRRYQKIQPYLE >gi|241320168|gb|ACQV01000018.1| GENE 54 54213 - 54824 199 203 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759408|ref|ZP_04757512.1| ## NR: gi|241759408|ref|ZP_04757512.1| hypothetical protein NEIFL0001_1941 [Neisseria flavescens SK114] # 1 203 72 274 274 420 100.0 1e-116 MSESRQSHFELLKLVAGVEVVLITPNNLSEYILPEYPLHHAFKYLSLVHKADYLRCYFMH HYGGGYSDIKAAQYNWSPVFDTLDCSNAYFIGYPEIKAEDLAPVEGKIGEDMQCYFSIIA GNCAYIFRKQTPFTQEWYNELLNRMDNYAEQLENNPGNVLGNNPGYPIPWTNILGDIFHP LCLKYTDKILLDNTLRPNLENYR >gi|241320168|gb|ACQV01000018.1| GENE 55 54906 - 55652 256 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 243 4 238 242 103 32 5e-21 MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESGAAAISERLAQWGGEGR ALNSAEPETIENLIADIEKEFGKLDILVNNAGITRDNLLMRMKEEEWDDIMQVNLKSVFR ASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKAGLIGFSKSMAREVGSRGITV NCVAPGFIDTDMTRALPEETRKTFEAQTSLGKFGEAQDIADAVLFLASDQAKYITGQTLH VNGGMLMP >gi|241320168|gb|ACQV01000018.1| GENE 56 55921 - 57903 766 660 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 10 557 12 558 618 299 33 4e-80 MHEFSLGPIVIVLLVSVITVICCRKFNIPSMLGYLLVGFIAGPGMFKLIPQSHATDYLGE IGIVFLMFSIGLEFSLPKLKAMRRLVFGLGGLQVIITMLSIMGILMAMGTPFNWAFATAG ALTMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVVPLMILIPALAGGSEGNLWVE LGLAGLKMLLTLGILFVIGSRVMSRWFRLVAKRKSSELFMINVLLVTLGVAYLTELEGLS MALGAFVAGMLLSETEYRIQVEDDIRPFRDILLGFFFITVGMKLDIQALIGNWQQILILL AILLVLKALVVFIIALRMKNPVGDSLKSALYLAQGGEFGFVMLAISSKINMVSPELEQAA TAAVLLSMIAAPFILGSSDAIVSRFVKSDWDMKALDLHSMLVETMSKSEHVLIIGFGRGG QSVARVLAQEGIPYFALDLDIARVQVARNAGEPVSFGDAKRREVLEAAGLGRAKMVVITL NNMHETQHVLGNIMSMHPSMPVYVRATNDDYVKTFTEMGAEETVSDTKETSLVLASYAML GHGLSYNHVYQTITHIRHSRYASLQDLFVGSDDDSFSDEDSKAVCRHAFPLQGEAHAIGK TIRELPLAAHYLKLLFIRRNTGKIQDLDPDFVLENGDILVVAGKQEEIISFENWCLQGDI >gi|241320168|gb|ACQV01000018.1| GENE 57 58672 - 60084 1568 470 aa, chain - ## HITS:1 COG:NMA0665 KEGG:ns NR:ns ## COG: NMA0665 COG2027 # Protein_GI_number: 15793650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Neisseria meningitidis Z2491 # 22 467 23 467 469 507 56.0 1e-143 MKLKSILSVGLMMAVCPSWALDFGRIPENEISVYVQELDSGKVIAEHRADELRNPASTMK LVTAFTAFRMLGGDYRWKTEFKTNGAIKGDTLKGNVYWVGSGDPVFDQHNLVQMQQQMRD KGIRHIDGHLILDRSLWGDVKNPDDFASDSAESFMTPPDPNMLAYKTVELRTEKGEDGNL VIRTNPPLPNLNIQNKLTLENKAGKCSVLKNHMKTSYKNNTLTVSGKLPESCLGQELYLN MYSMKEYVGKSFVNQWRQQDGTVSDDLTTGVAPHDAHVLASHLSKPLTDILTDMNKHSNN LIARSVFLKFAGNMSDYKLAQAKAASIVKSELAVAGINTEGLVLENGSGLSRVERLNARM MAQMLEKAYFSPFKNEFINTLPIAGKDGTLKTRLKQPGENLRLKTGTLKDVRALAGYWLG EKPLLVVVIINSQKSTDYLRDLDKLVSKIVQPGGEHWIDAKASCMIRYQA >gi|241320168|gb|ACQV01000018.1| GENE 58 60154 - 61581 1471 475 aa, chain - ## HITS:1 COG:BS_lmrB KEGG:ns NR:ns ## COG: BS_lmrB COG0477 # Protein_GI_number: 16077336 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 27 471 18 473 479 258 36.0 1e-68 MHDSDSQEGETAHEYYADNPDFPAKTIVATLFIGAFFGYLNDTLLNVALTPIMKDFGVDK TTVQWLTTGFLLVMGAFTPITAGVIQWFETRKMVLFTQATFLAGSLICAFAPTFGVLVVG RMVQAVSAAFFVPLLFNGVLSIFPPNRRGTAMGVITMMFTAAPAMGPTLSGIIIDHTHWR VLFGFTAPFMLAAMVLVGRYLTVNLSNISRPKIDMLSAVLSIAGFGGLVYASSNFAHMPL LEFILLFAASVVLVGWFAHRQFRLATPLLNLRAFEYKQFGYCVVILAGAVFLFLGLELMV PMYTQQVLMLTGTATGLILMPASIAQAVAAPLFGKLLDKKGGRFVVLPATVMLVVSLAVL WLFLRIDTQVVMLTAMFTLLALSVSACVTGETHGLNALPKTLNPHGAAILTTINPIAGAI GAAFFVGATNIGEKLSSADMPQQAMLDGIHLAMGCALVVGVVVVMFALRLKAHQK >gi|241320168|gb|ACQV01000018.1| GENE 59 61717 - 62283 934 188 aa, chain + ## HITS:1 COG:NMB1796 KEGG:ns NR:ns ## COG: NMB1796 COG0431 # Protein_GI_number: 15677635 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis MC58 # 1 188 3 190 190 324 81.0 5e-89 MSKKVSILVGSLRKGSFARKIAQNVISMFPEGYEAQIVEIGHLPLYNFDYDDPAVTDFPT PSSYTEFRETIKASAGVLFVTSENNRTVPACLKNAIDIGSKPNADVAWKKTPAGIISHSV GKMGGYSAQKNLRLALSYFDMPLTGQPEVFLGNSPTLFDDNGQLIESAREFVQGYIDQLV ALIEKNPK >gi|241320168|gb|ACQV01000018.1| GENE 60 62430 - 63107 1209 225 aa, chain + ## HITS:1 COG:RSc3404 KEGG:ns NR:ns ## COG: RSc3404 COG0745 # Protein_GI_number: 17548121 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 1 220 1 219 221 246 62.0 3e-65 MRVLLVEDDAMIAQAVSANLKDTGYAVDWVSRGSEVAAVVAAQAYDLLLLDLGLPGKDGL DVLAQIRNGGCTVPVLIVTARDDLHSRLNGLDGGADDYIVKPFDMAELQARMRAVLRRHG GQAQTLLSNGIITLNPSTHQAEVVGQEQAIMLSNKEFAVLQALLLRPGMILSRSDLEDKI YGWGEEVESNAVDFLIHALRKKLGKEAIQNVRGVGWLVAQNNQTV >gi|241320168|gb|ACQV01000018.1| GENE 61 63137 - 64450 1830 437 aa, chain + ## HITS:1 COG:NMA0670 KEGG:ns NR:ns ## COG: NMA0670 COG0642 # Protein_GI_number: 15793653 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 23 437 1 415 416 514 65.0 1e-145 MQRLIHTIKQSLQVKISLALICMLLPLSILAGIFSYYDTYHETQEVQDDLLRQVANYLDP SDADDENHSLDNDNKISVQFPNTPNPIVSLPKQISDGLHTIQADDDDDYYRVYTRNTKQG RIAVMQESDYREELAEMAAVQSILPMLLSLPLIILLTVWITHRAMRSIKTLSNDLEQRQI NDLSPMDTQDIPSEIQGFVVAINNLLQRTDENVRQQQRFIADAAHELRSPMTALSLQAER LNNMQLSAEAREQSALLQQSIQRNRHLLEQLLSLARVQAPETQRSKTLISLQNQFRRVLQ ELMPLALAKGQDIGVAVENDCQIHADDTEIYTLIKTFTDNAIRYTPKGGRIDLGFDETAE YLNIWVEDDGPGIPPSERQRAIDPFYRILGTEQQGTGLGLSIANTIVKRHQGRLKLADSR RFDSGLLIIAELDKKTL >gi|241320168|gb|ACQV01000018.1| GENE 62 64580 - 65659 1443 359 aa, chain - ## HITS:1 COG:NMB1814 KEGG:ns NR:ns ## COG: NMB1814 COG0337 # Protein_GI_number: 15677650 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Neisseria meningitidis MC58 # 1 359 1 359 359 580 81.0 1e-165 MRTLTVQTPSHQYPIFIGHKLIEQADTLLQPYLGKKAAIITNETVAPLYLKQLQTALDRL GVPHFSIILTDGEEYKNWQTLNLIYDGLMQNRAERKTTLIALGGGVIGDMVGFAAATYQR GAPFIQVPTTLLSQVDSSVGGKTAINHSLGKNMIGAFYQPQAVLADLTALQTLPQRELSA GMAEVIKYGALGDAEFFAWLEENMADLMAQHQEKMAEAVYHCCKMKADIVAQDETEQGIR AWLNLGHTFGHAIEAEMGYGVWLHGEAVAAGCVLASRLSQILGKTQQADTDRIAALMEAA SLPSAPPVFSFEKWIEHMSHDKKVSSGIMRFVGLEYLGKANITEITDMEILRQTLQPYL >gi|241320168|gb|ACQV01000018.1| GENE 63 65682 - 66194 757 170 aa, chain - ## HITS:1 COG:NMA0648 KEGG:ns NR:ns ## COG: NMA0648 COG0703 # Protein_GI_number: 15793634 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Neisseria meningitidis Z2491 # 1 168 1 168 170 222 65.0 3e-58 MEKINGNLILIGLMGAGKTTLGKQLAQMFECPFYDSDYEICTSSGVTIPTIFEMEGEEGF RNRETNMLKKLASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRYDSN RPLLQVANPLAKLQELYDQRDTLYRQTAHLVIESDSCHKTLKRLIQALGE >gi|241320168|gb|ACQV01000018.1| GENE 64 66327 - 68459 2782 710 aa, chain - ## HITS:1 COG:NMA0650 KEGG:ns NR:ns ## COG: NMA0650 COG4796 # Protein_GI_number: 15793635 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Neisseria meningitidis Z2491 # 1 710 1 761 761 822 61.0 0 MKTKHMTKLFAGFSVALAVQTAFAGNITDINVSTLPDNQKIIKIRFDKDVTTPHGFVTST PARIALDFANTNIRLPQPVLEYADPLLNQITAAQNNDRARVVLGLNKISQYNTEIRGNEV WVFVNESTDQTNAAVANERAATPSTARAAQTYQAVSAANIDFRKGARNSGIIELSAPGFS GQPDIKQQRDRVVVTLKNHTLPTQAQRSLDVADFNTPVQNVTLKRIGNSTQLIIRNNNAN WDINTKASSGRFVFEVSPKAANTESGGLNHNANKSFKGRKISLDFQDVEVRTILQILAKE SGMNIVASDTVKGTMTLSLKDVPWDQALDLVMQARNLDMRRQGNIINIAPRDELLAKDKA FLQAEKEIAELGPLYSQTFQLKYKNVDEFRKILRLEEYDSNNSNTRNTLLSNRGSALIDP ATNTLIVTDNRGVIEKFRKLIDELDVPTRQVMVEARIVEAEDTFFRNLGVKFGSGGAIGR TAWGSNWSNAQTNYKTNASFNRGEVGYRTWTLDPNVSLPTAAAVNSIALVRAFSSGALGL EISASEEQGKSKTISNPRVLTQDRKEAKIESGTEIPYQEASSSGATSITFKKAVLGLTVT PNITPDGQIIMTVKINRDTPIDCTVDSLMTKCINTKHLNTQAMVEDGGTLIVGGIYEEES TNAVNKVPVLGDIPVVGNLFKSRGKRENRRELLIFITPRIMDNVGNNLRY >gi|241320168|gb|ACQV01000018.1| GENE 65 68480 - 69022 500 180 aa, chain - ## HITS:1 COG:NMA0651 KEGG:ns NR:ns ## COG: NMA0651 COG3168 # Protein_GI_number: 15793636 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilP # Organism: Neisseria meningitidis Z2491 # 1 170 1 170 181 204 60.0 8e-53 MKKIILLLSLLPLAACTQSYEDLTQWMTQTRQEAKSKIIPFEEPTVTLPKPYSPPNFKGM NAFDSRRLDTAPKGGNAPDVNRPKETLEAFSLENMAFVGTLQSGGKVSGFIKVNDHVYTV YPGNYIGQNYGRIQSITEDKIILTEQVEDSYGNWVYRKAELPLSSKEADSSNSSDSSNSN >gi|241320168|gb|ACQV01000018.1| GENE 66 69038 - 69709 967 223 aa, chain - ## HITS:1 COG:NMA0652 KEGG:ns NR:ns ## COG: NMA0652 COG3167 # Protein_GI_number: 15793637 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilO # Organism: Neisseria meningitidis Z2491 # 20 197 21 199 215 210 65.0 2e-54 MASKNLKQLDVQNLYLLNMPSKLLLGGLLIVGMLALGYVGVFKDQIETLNTQEAKEAELK ETFTRKSIQAASLNNLKAELASIRSAFDVLLKQLPTDAEIPNLIQELHQAGSTNGLRLDS VAPLQPENDGPIQKLPYQISITGKYSQISQFTRDVGDLSRIITLDSLKLVNAGEDKEGKG NKGELTLSAIATTYKARPAEEIAAELAAQQAQEEGKPAENEQK >gi|241320168|gb|ACQV01000018.1| GENE 67 69709 - 70332 664 207 aa, chain - ## HITS:1 COG:NMA0653 KEGG:ns NR:ns ## COG: NMA0653 COG3166 # Protein_GI_number: 15793638 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Neisseria meningitidis Z2491 # 1 197 1 197 199 189 55.0 2e-48 MIELTRINLLPYREEIKQRKQQQFKVLMLGAFVVGLGLAAATYLGIDSAISNQEGRNNFL QTEIDRLDRELGEIDKLQQEKEAFLAKKLKVEELQEKRYQAAYVLDSLNALTPDNTYLTA LEAESPTSYKISGHAVSDNKIAVMMRSLPSTGIFLQPELLSIKKVDNYQEFTLKSSINQV NTPAPAPTAQSSSEIAEPVAEPAPEAQ >gi|241320168|gb|ACQV01000018.1| GENE 68 70337 - 71428 1170 363 aa, chain - ## HITS:1 COG:NMB1808 KEGG:ns NR:ns ## COG: NMB1808 COG4972 # Protein_GI_number: 15677646 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Neisseria meningitidis MC58 # 1 363 1 371 371 405 59.0 1e-113 MRLFKSTKDTKTGKASSGLNNRSAIGVDISQHAIKMVQLTGRSLNQIQLEKYVITKLPKN IVKGNKIQDYDQLATYIQHTYTQLRSSCKNIVAAVPQNLATVEQIIYNPRDTDLDLEEFV EAEVGQFAPIEEMNYDFQAEEVGSGQHVLAVAAKKDDVEPRIEMFENVGLPLSALDLDLL AQRNAFVYWMNTHAPEMAEEKVAVFGIHATQMYALILQNGRILYKQETPVSTEQLNQLIQ RTYRVTEEKAAQMMASQNKPSDYQSQIADRFNVQVAQEVQRVLQFYYTTQATDSFANIKH ILLTGFTAQQAGLAESIFSQTNTATEYLHPISYVERSAKVELPQFQIDAPSLTLAFGLAL RGL >gi|241320168|gb|ACQV01000018.1| GENE 69 71609 - 73978 3150 789 aa, chain + ## HITS:1 COG:NMA0655 KEGG:ns NR:ns ## COG: NMA0655 COG5009 # Protein_GI_number: 15793640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Neisseria meningitidis Z2491 # 2 789 11 798 798 1293 82.0 0 MGLLLGLALFGVGLIAIAILVTYPKLPSLDSLQHYKPKMPLTIYSSDGQVIGVYGEQRRE FTKIGDFPKILKDAVIAAEDKRFYDHWGVDVWGVARAAIGNVMAGGVQSGASTITQQVAK NFYLSSERSFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQIYFNKN VNELTLAEAAMLAGLPKAPSAYNPIVNPERAKLRQAYILNNMLEEGMITLQQRDQALKEE LHYERFVQNIDQNALYVAEMVRQELFEKYGEDAYTQGFKVYTTVDTAHQRVATEALRKVL RNFDRGSSYRGAENYIDLSKSDNVEETVSQYLSTLYTVDKMIPAVVLEASRKGVQIQLPS GRKVTLNSHALGFAARAVNNEKMGDDRIRRGSVIRVKGSGDTFTVVQEPLLQGALVSLDA KTGAVRALVGGYDYHSKTFNRATQAMRQPGSTFKPFVYSAALAKGMTASTMINDAPISLP GKGANGKAWNPKNSDGRYAGYITLRQALTASKNMVSIRILMSIGIGYAQQYIQRFGFKPS EIPASLSMALGTGETTPLRIAEGYSVFANGGYKVSAHVIDKIYDSQGRLRAQMQPLVAGE NAPQAIDPRNAYIMYKIMQDVVRVGTARGAAALGRSDIAGKTGTTNDNKDAWFVGFTPSV VTAVYIGFDKPRSMGSAGYGGTIAVPVWVEYMRFALKGTSVKPMKAPEGVVTNGGEVYMR ERMTTSSDLALDNSGVAPRPAQPARRAVPNENRRSAESNTAPAREESDETPVLPSNTGNN NRQQLDSLF >gi|241320168|gb|ACQV01000018.1| GENE 70 74044 - 74880 1008 278 aa, chain + ## HITS:1 COG:NMB1824 KEGG:ns NR:ns ## COG: NMB1824 COG0613 # Protein_GI_number: 15677660 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Neisseria meningitidis MC58 # 1 275 1 275 278 496 86.0 1e-140 MIDLHCHSTVSDGMLSPTEVVRLARQNGCTLLALTDHDHTGGLAEARTEADTLGLPFVNG VEISVTWHGRTIHIVGLDFDEHNEALQNLLAEVRKGRLKRLESIVAKLEKKGITGAYEGA LALAANKEMASRTHIAEFLIRKGHVKNKQQAFTKYLGDGKSCSVRHEWATLEDCVAAITG AGGMAIIAHPMSYELSATAKRNLFQEFKNLGGAGIEVHSGNCCKNDRLNYALLADRFDFL ASAGSDFHRPNDFSGGILGACPDLPEQCRPVWKHFKAV >gi|241320168|gb|ACQV01000018.1| GENE 71 74953 - 75318 445 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759420|ref|ZP_04757524.1| ## NR: gi|241759420|ref|ZP_04757524.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 121 1 121 121 249 100.0 3e-65 MCDYCADLRPTVRIKTPQKLSQMLLRAADRLADGTLADITLAYAKVRRISPDYVQTFARS GYIIDTDPQGNRRLHGWYDFLTHYFQCTHCKAVFEIDAETYHGSGGEWKMLEEAAKRFQA T >gi|241320168|gb|ACQV01000018.1| GENE 72 75365 - 76426 519 353 aa, chain - ## HITS:1 COG:XF0668 KEGG:ns NR:ns ## COG: XF0668 COG2931 # Protein_GI_number: 15837270 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Xylella fastidiosa 9a5c # 143 272 179 308 1208 110 40.0 5e-24 MLMVVFVPANSRLADCTVTTAARTALYYSSGGKQGAIEFGIGSAGKSVSFNDNLVNYSKS AYAALITSASRLHSNAVNRLAALVEQQKSEQASGKGKEIHNENEALKALQDLLNKANISL DLQGGVDNLQQNFDQIAKNYHTPLAIELYGEELLTTSVEDGVSFDMDGDGMAEQTAWLKK GSGFLVWDKNGDGMVNDGTEMFGEATVMSDGKRAENGVEALKDLDSDNNNIINQYDELWG ELRIWHDENSNGKTEEGELSLLSDWDIQSISLDFAEINLKDEADNKILFESEVVLENGER RKVADIDFQNDKGIYNELAGEISAETAADVVYPTEISTSVILPGENTAYIPAV >gi|241320168|gb|ACQV01000018.1| GENE 73 76679 - 77191 125 170 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759445|ref|ZP_04757549.1| ## NR: gi|241759445|ref|ZP_04757549.1| hypothetical protein NEIFL0001_1965 [Neisseria flavescens SK114] # 1 170 1 170 170 318 100.0 6e-86 MATVQNAQIRQHFIRMGMPKKEIDSITRDNVIMQKTHIFINKWGLSSIRVDHHVPATYTT RKLKGDIEYREMVFGKDYLTASDYAHEIEHGISDTLYRLDLADKRNPTKNLTANEYARRF LYEEGKAEYNRFQFDLRNNPKETKYGSDTAAIKAMNQQQAVDYFAHKMKT >gi|241320168|gb|ACQV01000018.1| GENE 74 77231 - 78010 342 259 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759422|ref|ZP_04757526.1| ## NR: gi|241759422|ref|ZP_04757526.1| hypothetical protein NEIFL0001_1966 [Neisseria flavescens SK114] # 13 259 1 247 247 513 99.0 1e-144 MQVIIFIKKEMSVKFLAALLWPAMLLPILSHADSGIQTVSVSQAYADDATGCGQLYPVDS FENLFRQMAGTLHSACLLDMPPEDLAKKWQIPVYRRYLQLSGRLRPDGEKQAVLRWKDKA ERQKWLKHRRRKLKRPTDGFTVVHQTDYDGSTFLEIEATPDYLKHYRSLFPDNRYPEDLP LPRIGWHLMFRPIFCSDSAVSFEKSLEAIDNNGHIKDFHARLSIHDSVSLYFMHDNQENM RCSKEISYIQYKKNYLITN >gi|241320168|gb|ACQV01000018.1| GENE 75 78265 - 79479 1402 404 aa, chain - ## HITS:1 COG:NMA0047 KEGG:ns NR:ns ## COG: NMA0047 COG0477 # Protein_GI_number: 15793078 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 404 1 404 405 576 81.0 1e-164 MTHTQQKSPNLWLVITAAAAILLITIGMRMTMGLFVRPVVDSTELSIQEFSLIIAVFQLM WGLSQPLSGALADRFGAFKVLGGGALLLASACLMVPQMPTYWGLMLAIGLLFAFGTGAGG FSIIMGQVAAKVPPHKRGLASGLVNAGGSAGQFLFAPLVQGLLILPAVGWTGTFYVWGGI ALLILPISWWLAGSKNAVATHHTSSENGQTLGQTVKAAFKDRSYILLHLGFFTCGFHIAF LVTHLPNEIALCGLPASVASTSIAIIGLANIAGCIFSGWCTGRFLGKYVLFGLYASRVAM VLIYLASPRTDVNFYIFAAALGFTWLATVAPTAAITGKLFGTRYLATLFGLTMLSHQIGG FLGSYIGGIVIYQFNDYGWMWYADAVLAGAAALLNLPIREKKTA >gi|241320168|gb|ACQV01000018.1| GENE 76 79918 - 80046 159 42 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365136|ref|ZP_05978019.1| ## NR: gi|261365136|ref|ZP_05978019.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 42 380 421 479 80 95.0 3e-14 MDSYRLISARLGAAKMFEAGFDASVSATFGIRSHREENAVLE >gi|241320168|gb|ACQV01000018.1| GENE 77 80068 - 80700 1122 210 aa, chain - ## HITS:1 COG:no KEGG:plu3514 NR:ns ## KEGG: plu3514 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 2 210 180 391 499 139 35.0 9e-32 MRLQNEDLPEAVKENIAHFRDSLNQRQSWQGSLSVGAVHNSNINEASGKVWCKTEIDGEC WEEFSGDKPISANGIKYEAAAVRRWQVKGHHGIVARALGYGRFYRDHKDFNEHTLNLSAG YQFENHRHTFALAPIIEWNGSGSKTLNRAYGVRSEWNLDKGSWTWNTEAEWKHLSYSDKT RLLDGSLFSVYNTLSYFPRNDLMLYGGIDW >gi|241320168|gb|ACQV01000018.1| GENE 78 80724 - 81182 432 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261365136|ref|ZP_05978019.1| ## NR: gi|261365136|ref|ZP_05978019.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 1 108 1 108 479 222 97.0 7e-57 MYKPSACLILFLAAPVLAAPRSDFSDNRTAQRLWQDTRQTMQEQEQKVREYRLDIPAENI GQTAETDPEADQGEALFNAVNHSDWQTVRPLLERYTQQTEYDPDIALLPAPRSPAAKADR KPPNKNTKPCCNAIPTSHADGLITHACFLKAV >gi|241320168|gb|ACQV01000018.1| GENE 79 81290 - 82030 1206 246 aa, chain - ## HITS:1 COG:no KEGG:PAU_01244 NR:ns ## KEGG: PAU_01244 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 77 245 81 246 248 128 43.0 2e-28 MKLNLQKTTAAVLAVVFSAGAFAANNAYNPFEYGYKNHKYGKKWGKPASEAEGEKVMKNA AYRSGVYYTNVNRIPAKADRNGVKTVQVNDAYTRQNLGRYAFDTIKSGGSEVYYGEWVGK EYAKGTNRGVFYSGDKRATSMPVSGVANYAVKGINNYTGNNPLTGTLRADFGQKVLTGSM KNNAMQLDIHSRIKPSSASFEGYARANGHFGTTEGHFFGNGASALAGVAKFKTNRNLDTA FGGVKR >gi|241320168|gb|ACQV01000018.1| GENE 80 82314 - 83156 1193 280 aa, chain + ## HITS:1 COG:NMB1815 KEGG:ns NR:ns ## COG: NMB1815 COG0121 # Protein_GI_number: 15677651 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Neisseria meningitidis MC58 # 1 280 1 280 280 523 87.0 1e-148 MCQLLGMNCNTPTDIMFSFEGFRRRGGITDYHADGFGIGFFEGKGVRLFHDDKPSANSPV ADLVRAYQIKSENVIAHIRKASQGQTSLANTHPFMREMWGEYWLFAHNGHLIDFFPEQGE YYHAVGSTDSERAFCFILNRLRSRFATKPEPEVLFDAIAGLTHEIRRHGLFNFVMSNGDC LFAHASTLLHYIVRKAPFGKARLLDDDVMVDFSKVTTPNDKVSVIATLPLTRDETWSQLA VNELVMFQDGDIVRSDRPENPVYMSAEEGLEIARAVGVSV >gi|241320168|gb|ACQV01000018.1| GENE 81 83356 - 83808 564 150 aa, chain + ## HITS:1 COG:VC2272 KEGG:ns NR:ns ## COG: VC2272 COG1327 # Protein_GI_number: 15642270 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Vibrio cholerae # 1 146 8 153 156 152 49.0 3e-37 MKCPFCQHPNTQVTDSRWLEDTNSIRRRRKCLECGQRFSTFETVEMRMPQVIKSDSTRVP FNPHKLQTSLERALHKRPVTQEQIDETVALIEQRLYRLGKKEVASHIVGEMAMEELAKID QVAYVRFASVYKSFKDVSEFTQVIAECKAQ >gi|241320168|gb|ACQV01000018.1| GENE 82 83823 - 84926 1107 367 aa, chain + ## HITS:1 COG:NMA0644_2 KEGG:ns NR:ns ## COG: NMA0644_2 COG1985 # Protein_GI_number: 15793630 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Neisseria meningitidis Z2491 # 147 364 1 218 223 290 68.0 2e-78 MFSALDTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGEPHAEVHALR QAGAAAKGATAYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLSMLEA AGIRTESGLLEAQARELNRGFLSRIERGRPFVRLKCAASLDGKTALSDGRSFWITGEAAR EDVQILRAESCAVLTGIGTVLADNPKLNVRSFPTLRQPARIVLDSRLQIPLDCHLVTDTE SPTVIVTLSSDEQRLQALRTFEHIRIIRPSEHINGRINLLSLMPQLAEFGFGEVLVEAGS TLASAFLKDDLVDEIVLYQAPKLLGAGKPLFSLSENPAVLLSDSPWQSQSVEIIGQDIKW VLRKKSI >gi|241320168|gb|ACQV01000018.1| GENE 83 85500 - 86807 1972 435 aa, chain + ## HITS:1 COG:PA3159 KEGG:ns NR:ns ## COG: PA3159 COG0677 # Protein_GI_number: 15598355 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pseudomonas aeruginosa # 3 435 5 436 436 658 73.0 0 MKNITIQKFADKTAKIGIVGLGYVGLPLMLRYVDIGYQVLGFDIDTNKVDKLNKGESYIE HIPSDKIAAASNSLFEATTDFSRIGEVEAVILCVPTPLNKYREPDMSFVIDTTDAVKPYL RAGQVLSLESTTYPGTTEEELLPRMEEGGLKVGQDVFLVYSPEREDPGNPNFETRTIPKV IGGHTPACLEVGLALYQPAIDKVVPVSSTKAAELTKLLENIHRAVNIGLVNEMKIVADKM GIDIHEVINAAATKPFGFVAYYPGPGLGGHCIPIDPFYLTWKAREYGVNTRFIELAGEVN SHMPDYVIEKVGLALNDHNRSIKDSKILVLGIAYKKNVDDMRESPSVEVMDRLHKLGAVV SYSDPHVPEFPHVPGHHYFDLKSEALTPETVAQYDCVVLTTDHDKFDYDMITEHAKLIVD TRGKFPVKNPKVIKA >gi|241320168|gb|ACQV01000018.1| GENE 84 86976 - 88403 1260 475 aa, chain + ## HITS:1 COG:NMB1818 KEGG:ns NR:ns ## COG: NMB1818 COG2244 # Protein_GI_number: 15677654 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Neisseria meningitidis MC58 # 1 465 1 468 473 349 48.0 7e-96 MNAKKILGYALGPVGSAAFGLLSLPLISWYFPAEDIGRIVLLQTIAGLSILLLGLGLDQS YIRDYYAVKDKAELFKSVFLSPLILTVAVVVSVLLINASWPSEIIFDIPSANLGILFLIF LATTLITRFLALILRMKEQALTFSVSQLAPKFLILVLVFAVIASGLPTNTTSLVFTYTAA QVLTVLLLIYQLRRDLQAVSHAKWSSELHRDGLRYGLPLAFGNLAYWGLTSIDRFVLKNI SGLDELGIYSMAVSFGAVALIFQSVFSTIWAPLVFKWVEEKTNLDKIGDITLSMTVLISA MICLIGIFSPMATWILPEKYTQVQFILLSCMLFPLFYTLTEVSGIGLNVVRSTWLITVIN IVAFIANTALLYLLVPKFGAKGAAMASATAFWLFFIFKTEFSSRLWQPLPRLKIYTNSTL CLIICLAYTWLGTRDNYIWFALVWTVGLGFLFLKYKHALFAAAEKIKAKLNRSAK >gi|241320168|gb|ACQV01000018.1| GENE 85 88491 - 89756 1229 421 aa, chain + ## HITS:1 COG:no KEGG:MS1493 NR:ns ## KEGG: MS1493 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 6 402 21 421 428 175 31.0 4e-42 MLAAYMLGPALSFKVGVPRIDNPLTLIFVLLGFVVFFLESKHIPRKIFAMLCALTAMCIW PAIHMGITSLTPTQYMDILFFMAIPAFFYLFYQVSKRADDPLGTIQKFLIVFTLFIAVPP FAELATGIQFVSASDELAIDEGSLKGLFFNPNNLAATAVCLAPAILFFFQLQGRKHKEKL LGWGLFLLLGMAIFASVSRTAIGCYLLILLVYTAYRKNGFITVGVAGLLALVLSMIPSRA IAEFLLSLNGNQFLERFSSRVYLFLYDLGSDNSVSYRQEIYNYFWNNPPLLLTGYGPKNF REYFGGHLSNSVGFENPHSFIIELYLGFGIISLLGFIAFVAFYFLYTASSRALTNKSRVL AWVTLGIFLLAGFIPSTILRMPFIWLPCLLIFIYSVFVAPKLKDMAAYAYNETLYDTKKP S >gi|241320168|gb|ACQV01000018.1| GENE 86 89753 - 90823 1517 356 aa, chain + ## HITS:1 COG:RC0575 KEGG:ns NR:ns ## COG: RC0575 COG0438 # Protein_GI_number: 15892498 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Rickettsia conorii # 134 323 118 303 338 83 28.0 6e-16 MKIILTTSMSGLGGTENATFRLGRLLKQRGHDIVLASSDGPLIQEAQALGIRWQPIDFYQ GGLLGYVKGMFAYMKLLKKEKPDVIHCQMARIVPACAIAAKLASPKTKVFYHARGLDPET YPKIAKLFNKLGVYIIGNCKHEREKLIRYGFPANRITYTYNALHKADFVPEKTVKDYVQL GTLSRLDTVRAVHLMLDILKKMVDRGMPVRLNVAGIGEEMDNLKAQAKRLGIEDKVTFLG GVRDLTGYFKEVDILVNTPHCVGDHGAGVGNNILEAGLYDTPVVTYNMAGISEMVITGQT GYCIPFGDDEAFIEAVDTLIKHPELRGQMGKALHKHVETLCSDDEIYRTTMAAYEM >gi|241320168|gb|ACQV01000018.1| GENE 87 90837 - 92009 1723 390 aa, chain + ## HITS:1 COG:NMA0640 KEGG:ns NR:ns ## COG: NMA0640 COG0438 # Protein_GI_number: 15793628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 390 1 387 387 626 78.0 1e-179 MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHYDKSFRRPEDAEAASQG RLKVMLLEESGYSKNVSLDRVKSHHVFVKNFEQWLKNCRPGEQDVVFSAYPLIATNLLLG KHKARLGYKLIIDVQDVWPESFSSVVPFLKKIPHNLLPFSSRANRAYRYADALVAVSQTY LDRAKEANPNVPGEVVYIGADFPKLDAAPAKDFGDNKTRFFYLGTLSYSYDVETVCKGVR KLLDAGENVELHIMGGGPDLDRLKQYACDGIRFYGYIPYAEMMSVAKGCDISVNAIHSYA MQSITNKLSDYMALQKPILNSQVNDEVAEVLTLLPHADYRSGDVGSFVRAAKDILARKND PVQSEEIVRRFKRDVAYQKIVNLIERLAHE >gi|241320168|gb|ACQV01000018.1| GENE 88 92002 - 92619 792 205 aa, chain + ## HITS:1 COG:NMB1820_1 KEGG:ns NR:ns ## COG: NMB1820_1 COG2148 # Protein_GI_number: 15677656 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Neisseria meningitidis MC58 # 1 200 1 200 223 359 85.0 2e-99 MNKFFKRLFDIVASASGLIILSPVFLILVYLIRKNLGSPVFFIQERPGKDGKPFKMIKFR SMRDAIDKDGNPLPDSERLTDFGKKLRATSLDELPELWNVLKGEMSLVGPRPLLMHYLPL YNDFQNRRHEMKPGVTGWAQVNGRNAISWDEKFAHDVWYIDNFSFWLDIKILFLTVKKIF VKEGISAEGEATMPYFTGNKTDEKK >gi|241320168|gb|ACQV01000018.1| GENE 89 92606 - 93580 1295 324 aa, chain + ## HITS:1 COG:CAC2189 KEGG:ns NR:ns ## COG: CAC2189 COG0458 # Protein_GI_number: 15895458 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Clostridium acetobutylicum # 5 320 2 315 315 146 30.0 5e-35 MKKNNILILSAGRRVELVQDFQTEAARFSDGIGVFATDLNPHMSSACHVADRAFSVPRID AAEYIDSILELAQQHDIGLIVPTIDTELLKLAEARDRFEAEGIHIVISDAKLITLCCDKR LTAGLFAQYSIRSPEIYERDHLVFPCFAKPYDGSRAIGAKKINTPADLTVDITEDPKMMF TQYIDIENTFSEFTVDMYYDRQGRLKCAIPRERLEVRTGEVSKGATRRNALYEELVEKMA VLEGARGCITAQFFVSKTDSTTYGVEINPRFGGGFPLTYAAGGNYPGWLIQEYIGGQDVP FSDDWENNLIMLRYDAKVLVREHD >gi|241320168|gb|ACQV01000018.1| GENE 90 93573 - 94265 572 230 aa, chain + ## HITS:1 COG:MJ1437 KEGG:ns NR:ns ## COG: MJ1437 COG1011 # Protein_GI_number: 15669628 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanococcus jannaschii # 9 220 5 221 228 58 25.0 7e-09 MIKPEESVIVFDLDDTLYSEYDYKCSGIQAVVGIITSLYPQYDADVLNEIADNKSKDWLD NLCHHCKLNELEKQSLLWQYRLHRPVIRPYVEPSFLRKLMRPFAARALITDGRSLTQRLK IQVLGLTDLFDDILISEAMQSEKPDNKRFVFLQNKYPAAKRFIYIGDNIKKDFVVPNKLG WLSIGIMPKPHNIHQADPEQYGREYQPTLWINTLEELTTLTTSATEKANA >gi|241320168|gb|ACQV01000018.1| GENE 91 94279 - 95058 1119 259 aa, chain + ## HITS:1 COG:lin1937 KEGG:ns NR:ns ## COG: lin1937 COG0223 # Protein_GI_number: 16801003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Listeria innocua # 2 235 3 244 312 77 28.0 3e-14 MKILFMGRKQVSANLLRFLTKQDHIEIVGVLTDSHLQGSPTTAAAQELGLPLYTFDTALE AMREGRLKYDLGLSVLYWRKLRDEFLSIPTLGTINFHPALLPEYKGTGGYNLAIMDELNE WGNTAHYVDASIDTGEIIEVDRFPIEAETETAQSLERKTMQALEDFARHIITRAIESKTK LPTTPNTGGRYVSRDEMEAMKQIRDGDNIEKKIRAFWFPPYDGAYVEINGQKYTLINRQL LEEIAPKGSTSLFAGKTNA >gi|241320168|gb|ACQV01000018.1| GENE 92 95051 - 96226 1612 391 aa, chain + ## HITS:1 COG:NMA0638 KEGG:ns NR:ns ## COG: NMA0638 COG0399 # Protein_GI_number: 15793626 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Neisseria meningitidis Z2491 # 1 389 14 402 404 764 94.0 0 MLNISLSPWPSFTQEEADAVSKVLLSNKVNYWTGTECREFEKEFAAFVGTQYAVALSNGT LALDVALKAMGIGQGDDVIVTSRTFLASASCIVTAGANPVFADVDLNSQNISAETIKAAL TPNTKAIIVVHLAGMPAEMDDIMALAKEHNLWVIEDCAQAHGAKYKGKSVGSIGHVGAWS FCQDKIMTTGGEGGMVTTNDKELWSKMWSYKDHGKSYDAVYHREHAPGFRWLHESFGTNW RMMEMQAVIGRIQLKRMPEWTARRQAHAAKLAESLGKFASIRLVEVADYIEHAQYKFYVF VKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEVYLEKAFDNTPWRPKERLKNAVELGDT SLMFLVHPTLTDEEIAFCKENIEAVLTEATA >gi|241320168|gb|ACQV01000018.1| GENE 93 96335 - 98236 2504 633 aa, chain + ## HITS:1 COG:NMA0637 KEGG:ns NR:ns ## COG: NMA0637 COG1086 # Protein_GI_number: 15793625 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Neisseria meningitidis Z2491 # 1 626 1 626 636 926 73.0 0 MNLETLLALPRNLKKTFFVIHDILMIFVAFWFAQSLKVQYSDEWLSIANWLAFGSTAVLT IILFIRIGLYRAVTRFVSIRVLTAAAFGSIISAVLFCLTTLIFEQKLHLALPIVYFLVLV VGVTSSRMILRAILTDHHRKQMTPVIIYGAGQSGRQLLEAIKQVNEYSAIAFVDDNPKIQ RTVIYDLAVHNPNEIPMLISRYGVRKILLAIPSSTPEERKDIIRRLEAYKCEVLTIPGMK DLVDGKINVSSLKKISVVDLLGRAPVAPRPELMSADISDKVVMVTGAGGSIGSELCRQIL NCRPTKLLLFELSEFALYSIDKELRETQAAQGSQVEVVPLLGSVQNKERLSSIMKAYHVD TVYHAAAYKHVPMVEFNTIEGIQNNVFGTLCCAQAAVDAGVSTFVLISTDKAVRPTNTMG ASKRMAELCLQALAAEPEQKTRFCMVRFGNVLGSSGSVVPVFEKQIAEGGPITLTHQDIT RYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIIDLARQMIVLSGLKVKDEQHPHGD IEIKITGLRPGEKLYEELLIGNEVQKTTHPRIMTASEVMLPWTQLSDILSELHTACLQSD QNSLRQLLLRAPTGFVSKDGICDLVWQQNNKAV >gi|241320168|gb|ACQV01000018.1| GENE 94 98280 - 99407 1548 375 aa, chain + ## HITS:1 COG:STM2118 KEGG:ns NR:ns ## COG: STM2118 COG1596 # Protein_GI_number: 16765448 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Salmonella typhimurium LT2 # 1 373 2 372 379 311 43.0 1e-84 MKKTLSLLTLFALTACNSTTVIPGSTIKTRTKTIVYTDTDTAADTNLDSRVAVYPITPNL IEKMRKPPVLSQNNQGLEQSKSAYRYRIGSGDVLNIMVWAHSDLNSPIQQSNPQTNQVSR GAWVDEGGYITYPLAGKIQAKDKTLDELQNTLTNLLKRYIKNPQVAINVTEFRSQRISVS GAINQAGQLPITNIPMTILDAINQAGGVTQSADTQHIKWTHNGVDRTISLQDMLQYGDMS QNHLLSHGDIVYVPNSSNNKIYIMGEVGKQATLPIGNHGLNLTQALGEVGGMNQNYADAT GVFVIRRAPEDAAKPIHIYQLNLKDATSYALGSEFKLRSEDTVYVTAAPVTRWNRVMSQI TNSISNVNTLDNTFR >gi|241320168|gb|ACQV01000018.1| GENE 95 99579 - 100028 538 149 aa, chain + ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 145 1 145 147 141 45.0 4e-34 MYHNILIVCLGNICRSPTAERIMQKKLPGHQINSAGIKALAGKDADFQAIKTALKHGVIV AGHTPRQLTAPMCEQADLILVMEPSQIDMVADIHPPARSKTMLFAQWLPKKTIPDPYKQS SEMFEAVFEQLNAAADTWKTKLNGKTQPV >gi|241320168|gb|ACQV01000018.1| GENE 96 100055 - 102214 3262 719 aa, chain + ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 13 478 27 492 492 313 38.0 5e-85 MKKTTYTPYSADNDEIDFGQQLRVIWTNKYKILAALLAGGILGAAFSLASTPQYRADAML EIETRQNQILTEINSIFNNQTTPSEAEVELVQSRLVLGKTVDNLQLDQEVKAKYTPVIGS LMHNVSGDPDPKLTVGSFTVQDEWFNKTFTLTAKSNKAYTLTLPDKRVVEGKVGVPLKIN NQTTLKIDQILANPGQEFALTKFSRISAIENIQNKLAVISKGKTSPIINLTFTGTDPKRT SVILNSIADNYVAQNRERDVQVASSGLAFISEELPRLKETLQDAENKLNAYRQQSGSLDI PLESKGALESLTGIETQITLLKTEEAGLAELYTPEHPSYKAVLDKLAVLERAKNKINQQI AELPNTQQEVIRLTRDVETNQATYVQLLSKQQELNIMKASAQGNVRIVDYAYVPENPVAP RKAVITLLSALAAGSLTALWLMIRNRMKNGITSSEEIENLNLEVVALVPHSKTQQKRDFF KSKFKKTGGRSNYLLASEDRTDTAVEAIRALRTNIYFSMLDAPNNVLMITGAAPEAGKSF ISANLATVMAQSGKRVLLIDTDMRKGYLDRLFSLTPEFGLSDILNGKAAPAKAVQETGIE NLHLISSGSYPSNPSELLMDNRFNELLANASQRYDYVILDTPPVLAVTDAVIIGQHAGTV LMISRYAHTRARELEASVERLKQNHINIKGVVLNGMKREANNSYDYYAYDAYHSGNNKS >gi|241320168|gb|ACQV01000018.1| GENE 97 102350 - 103339 1386 329 aa, chain + ## HITS:1 COG:NMA0375 KEGG:ns NR:ns ## COG: NMA0375 COG0240 # Protein_GI_number: 15793383 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 329 1 329 329 560 88.0 1e-159 MKITVIGAGSWGTALALHFAHHNNEVALWTRNPDQIRTLQADRENKRGLPGFPFPESLTV HADLGEALKDSQLALIVTSVAGLRSSAELLKQHNAADIPVLAACKGFEQDTGLLTFQVLK EVLPNNKKIGVLSGPSFAQELAAQLPCAIVLASENKDWVEETTAHLNTNVMRLYGSTDVI GVAVGGAVKNIMAIATGLSDGLEYGLNARAALVTRGLAEITRLAIAMGAQPKTMMGLAGI GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTAAKYQIDMPI TQTLLQLIRKEMTPQQVVERLMERSARFE >gi|241320168|gb|ACQV01000018.1| GENE 98 103414 - 103737 566 107 aa, chain + ## HITS:1 COG:no KEGG:NGK_2214 NR:ns ## KEGG: NGK_2214 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 106 15 120 123 85 62.0 8e-16 MNQSLNNLEINVYQLVQKFETLVSENRRLNEEIDRLKLEQEQQKNQHEAAIDELSEALLV QVGKLKEDLQSKIDNLTAEKENYRNALAQSADQIRSLIARLPQETQQ >gi|241320168|gb|ACQV01000018.1| GENE 99 103749 - 104051 532 100 aa, chain + ## HITS:1 COG:NMA0377 KEGG:ns NR:ns ## COG: NMA0377 COG3027 # Protein_GI_number: 15793385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 99 1 100 101 115 64.0 1e-26 MSIEQVNLDIINVNFTINTPSEEKATLLQAVEMLNKKSDAIKESGRIVGTDKIVVMAALN VVHDLLKATLNDDLAIGEFERRITDMNNACQKALARLEQN >gi|241320168|gb|ACQV01000018.1| GENE 100 104419 - 104850 755 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225374042|ref|ZP_03751263.1| hypothetical protein NEISUBOT_02339 [Neisseria subflava NJ9703] # 1 143 1 143 143 295 100 7e-79 MKTFSAKPHEVKREWFVIDAEDKVLGRVAAEVAHRLRGKHKPEYTPHVDTGDYIIVINAD KLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALEQAVKGMLPKGPLGYAMIK KLKVYAGAEHGHAAQQPKVLELK >gi|241320168|gb|ACQV01000018.1| GENE 101 104863 - 105255 654 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076946|ref|ZP_03720145.1| hypothetical protein NEIFLAOT_01998 [Neisseria flavescens NRL30031/H210] # 1 130 1 130 130 256 100 4e-67 MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAES FDIKVNVTGGGETGQSGAIRHGITRALIDFDAALKPALSQAGFVTRDAREVERKKPGLRK ARRAKQFSKR >gi|241320168|gb|ACQV01000018.1| GENE 102 105339 - 105848 299 169 aa, chain + ## HITS:1 COG:NMB1845 KEGG:ns NR:ns ## COG: NMB1845 COG0526 # Protein_GI_number: 15677681 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 168 1 168 169 173 45.0 2e-43 MMKTLLHYAKSLLQAVIIFIFLSLIVDWVRKPDQPLQSAAQTLTLTDGQTTSLQSFSQNR VAVVYFWGSWCRICSYTSSTIEKLHQDNIPTLGIALRSGSNADIARHMQENNLSFPNFND SDGLMAQKWNIAVTPTIIILKDGKMIHHTSGLSSYIGLKIRIYLANIFS >gi|241320168|gb|ACQV01000018.1| GENE 103 106188 - 106625 735 145 aa, chain + ## HITS:1 COG:NMA0613 KEGG:ns NR:ns ## COG: NMA0613 COG1846 # Protein_GI_number: 15793603 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 146 220 90.0 8e-58 MPNQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGTLDFQDLANQA CILRPSLTGILTRLEKAGLAVRLKPSNDQRRVYLKLTPEGEKLYESIGALVDERYDAIEK VLSKEKMAQLKELLAELAKIEQALK >gi|241320168|gb|ACQV01000018.1| GENE 104 106636 - 107136 447 166 aa, chain + ## HITS:1 COG:NMA0614 KEGG:ns NR:ns ## COG: NMA0614 COG1853 # Protein_GI_number: 15793604 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Neisseria meningitidis Z2491 # 1 165 1 165 166 261 75.0 3e-70 MTDSTHTLKRSFRDAMASCAAGVHVITTDGEAGRYGITMTAVTAVTDEPPTVMLCINRQS AIIPILQGNHDLCINTLNDSQQDIAEHFAGLTDLSPEERFEYHIWHRGQTGQLEVEGALA HLHGSIVDQREIGTHYVFFVQLNEIRNTDTQAPALLYFRRQFKYLA >gi|241320168|gb|ACQV01000018.1| GENE 105 107222 - 107917 850 231 aa, chain + ## HITS:1 COG:NMB1841 KEGG:ns NR:ns ## COG: NMB1841 COG1208 # Protein_GI_number: 15677677 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Neisseria meningitidis MC58 # 1 231 1 230 231 317 70.0 1e-86 MKAMILAAGRGERMRPLTDHTPKPLLEVAGTPLIGWHLRRLQQAGFTEIIINHAWLGQQI EDTLKDGSDYGVRIAYSPERAGGLETAGGIATALPLLGDEPFLVVNGDVLTDIDFQAAQL AAKRMQEHNLLAHLWLVDNPPHHPEGDFGLLSDGLVSASSTDGQALTFSGVGVYHPALFK DTSAHQAAKLAPLLRQAMSQSKISGEHHNGLWLDVGTVERLQEADRIAQSW >gi|241320168|gb|ACQV01000018.1| GENE 106 108011 - 108913 628 300 aa, chain - ## HITS:1 COG:HI0223 KEGG:ns NR:ns ## COG: HI0223 COG2962 # Protein_GI_number: 16272186 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Haemophilus influenzae # 1 293 5 298 300 214 42.0 2e-55 MTNLSKGLLAAITSNALFAMLFLYGVWMQPMSGTEIFAWRMVAMLSALCVLMTMVNGWQA AARFANNIGRDWKRWLLIVLPTPIFASQLWLFVWGPVNGEGVNIAMGYFLFPLAMMLGGR IWFKECLNRLQRVAVALACAGVACELVRSGAFSWTTVWVFGTYPFYYLLRRKLGVPSLIG LAFDLMMITPFALAYILLATDTPAMIAAKPVLIFFIVLLGFNSAISMHLNLKANQLLPVA MFGMLSYLEPVLLFIVSIVWLDEPVQKGALIGYGLIWSGLCVMIVNGLLGMKKEKKLAKA >gi|241320168|gb|ACQV01000018.1| GENE 107 108953 - 110023 669 356 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 2 331 479 797 832 262 45 7e-69 MLVLGIESSCDETGVALYDTERGLLAHHLHTQMAMHAEYGGVVPELASRDHIRRVVPLTQ GCLKEAGVGYADIDAVAFTQGPGLGGALLAGSGFANALAFAIGKPVIPVHHLEGHLLSPL LADDKPEFPFVALLVSGGHTQFMAVRGIGDYTLLGESVDDAAGEAFDKTAKLLGLPYPGG AKLSDLAKLGTPDTFTFPRPMLHSHDLQMSFSGLKTAVLTAVEKVRAETGSDEIPEQTRN DICRAFQDAVVDVLAAKAKKALLDTGFRTLVVAGGVGANWKLRDEFSHLTVKVPSAKGKP KPQEEKINVYFPPMAYCTDNGAMIAFAGAMRLAERQAVGAFNVKPRWPLSDIVKQG >gi|241320168|gb|ACQV01000018.1| GENE 108 110123 - 111310 1388 395 aa, chain - ## HITS:1 COG:NMB1803 KEGG:ns NR:ns ## COG: NMB1803 COG0755 # Protein_GI_number: 15677641 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Neisseria meningitidis MC58 # 1 395 1 395 395 581 83.0 1e-166 MNNKHQALPEHELLTHKSFIRNLNLFDWAFALLIAIGAFIAQTQAGLHMDIYEMVILWVS GGIAVFLGWFFKPMRWFIPLGVCLAYLAVDLYGGDIKHADGFLLKYLLSSQSAIMWQCAF VFFALFAYIVGAIAAVRKNVPSNTLLGMGTVFAWVSAVAGFVGLLVRWHESYLLRPDAGH IPVSNLYEVFILFLVITALMYLYYEGRFAVQKLGGFVFSFMAIVVGFVLWYSVSREAHAI QPLIPALQSWWMKIHVPANFIGYGAFCIAAMLGIAELLALRKEDTGKKAWLPHSQVIEEV MYKAIAVGFLFFTIATILGALWAADAWGRYWSWDPKETWAFIVWLNYAVWLHLRLVTGWR GRVLAWWAVIGLIITAFAFIGVNMFLSGLHSYGTL >gi|241320168|gb|ACQV01000018.1| GENE 109 111303 - 113318 2261 671 aa, chain - ## HITS:1 COG:NMB1804 KEGG:ns NR:ns ## COG: NMB1804 COG1333 # Protein_GI_number: 15677642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Neisseria meningitidis MC58 # 1 671 1 671 671 1154 81.0 0 MSKSSSSVPLIRRPWFAFFSSMRFAVALLSLLGVASIIGTVLQQNQPQVDYLVKFGPFWS QIFGFLGLYDVYASAWFVVIMMFLVISTGLCLIRNVPPFLREIRSFRENAKEKSLAAMRH SIVLDGQVTPEIAQRYLEVQGYGCKTVTREDGSVLVAAKKGAMNKWGYIFAHAALIVICL GGLIDSNILLKIGMLTGRIVPDNTAVYAKDFKPESVLGESNLSFRGNVNIAEGQSADVVF LNADNGMLVQDLPFSVKLKKFHIDFYDTGMPRDFASDLEVTDKATGKVSEHTIRVNHPLT LHGITVYQASFADGGSDLTFKAWNLADADRTPVKLKATSMREFPLDLGKTSYKLEFDQFT SMNVEDMSEPSEKEQNLKSALNDVRSVRQEGKKYTNIGPSIVYRIRDKAGQAVEYKNYML PVKQDEDYFFITGTRSGLAQQYRWLRIPMDKNGQIDTFMALRQYLKDDAARRKTVANAVK GAPAEIREQFMAAAENTLSIFAKGGYLALDEFVTTNIPKEQQEKMQGYFYEMLYGVMNAA LEDTISTYNLPAWPQDEKRNRFLLHAMDAYTGLTEYPAPMLLQLESFTEVRSSGLQMTRS PGAFLVYLGSVLLVLGTVFMFYIREKRAWLLFSDGRIRFAMSSSRNERDLQKEFPQHTRQ LQQLAKDLNHE >gi|241320168|gb|ACQV01000018.1| GENE 110 113523 - 114146 1006 207 aa, chain - ## HITS:1 COG:NMA0658 KEGG:ns NR:ns ## COG: NMA0658 COG2863 # Protein_GI_number: 15793642 # Func_class: C Energy production and conversion # Function: Cytochrome c553 # Organism: Neisseria meningitidis Z2491 # 1 206 1 206 207 306 80.0 1e-83 MKRLTLLALVLAAGAVSAAPKADAEKGKQVATTICAACHAADGNSGIATYPKLAGQAAAY TYGQTMAIKDGTRTHGAAGVMKPMVMNLSEQDIRDAAAYYAKQQGKPGEANPKENPELGA KIYRGGLSAKKLPACMSCHGPSGAGIPGGGTEIQAYPRLGGQHKAYVVEQMKAYQSGQRK NAIMADIANRLSEEELNAVANFIQGLH >gi|241320168|gb|ACQV01000018.1| GENE 111 114362 - 115003 873 213 aa, chain + ## HITS:1 COG:NMA0656 KEGG:ns NR:ns ## COG: NMA0656 COG0218 # Protein_GI_number: 15793641 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 209 360 88.0 1e-99 MNLFQNAKFFTTVNHLKDLPDTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQ HINFFELENGNFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLILIMDSRHPLK ALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTERQKISVQLFSSL KKQGMDEVNQVVGSWFDAHREEIENLAGETSPE >gi|241320168|gb|ACQV01000018.1| GENE 112 115456 - 115809 422 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|284800141|ref|ZP_05985805.2| ## NR: gi|284800141|ref|ZP_05985805.2| peptidase propeptide and YPEB domain protein [Neisseria subflava NJ9703] # 1 117 50 169 169 164 93.0 1e-39 MFAKVSGQQAAAAAVAEVGGVVKDVDYKYKQHLGGRYKVEILKDGVEYEALVDAQNGKVL AVAQDDDQDKRHFGKHDKHHKHDNAEPSSSQNTDYQAPADAAPGTPENATASEVTQS >gi|241320168|gb|ACQV01000018.1| GENE 113 115911 - 116129 169 72 aa, chain - ## HITS:1 COG:no KEGG:NMA0634 NR:ns ## KEGG: NMA0634 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 67 3 69 71 111 86.0 9e-24 MDTTLKNKAEAILGEPLLDEPVRPESWECCGSECGDACIQTMYWAEKARYDAQRRKLKEA GWVGGEDETKAV >gi|241320168|gb|ACQV01000018.1| GENE 114 116107 - 116340 513 77 aa, chain - ## HITS:1 COG:NMB1826 KEGG:ns NR:ns ## COG: NMB1826 COG2501 # Protein_GI_number: 15677662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 76 47 122 123 137 98.0 4e-33 MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI EFDGARLEIADGYDPEE >gi|241320168|gb|ACQV01000018.1| GENE 115 116507 - 119941 4305 1144 aa, chain + ## HITS:1 COG:NMB1827 KEGG:ns NR:ns ## COG: NMB1827 COG0587 # Protein_GI_number: 15677663 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 1144 1 1144 1144 2259 95.0 0 MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGA GIKPIGAVDVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTEAYVGKDRNIHHAELNPE WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPNAFYLELQRLPERPE WEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEARVCIAGGWVLTDKKRPRDFTPS QFFIPPETMAERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLVKLS NEGLQERMVQLYPDEAERAEKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE YVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLGLDDA MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGKIPLDDQAAYQI FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN NADQKAANANQGGLFDMMEDAIEPVQLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGQTLE NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI TRLAAILTAHRLPDTSHIPLQLSYSNGKASGKLKIAPKWMVTPSTALFDELETLLGSRAV RVNW >gi|241320168|gb|ACQV01000018.1| GENE 116 120286 - 120621 539 111 aa, chain - ## HITS:1 COG:no KEGG:FTN_0764 NR:ns ## KEGG: FTN_0764 # Name: not_defined # Def: hypothetical protein # Organism: F.tularensis_U112 # Pathway: not_defined # 3 111 4 113 117 106 74.0 2e-22 MTCKTHEHHDHVHGANCGHTAIKHEGHVDYLHDGHLHHEHNGHYDEHALSVNETNPDGCH PVDTCHGHVHGEGCGHEAVPHGDHVDYIVNGRLHHQHGDHCDDHGPVEIVK >gi|241320168|gb|ACQV01000018.1| GENE 117 120912 - 121406 448 164 aa, chain + ## HITS:1 COG:STM4490 KEGG:ns NR:ns ## COG: STM4490 COG4127 # Protein_GI_number: 16767734 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 9 157 1 150 329 108 38.0 4e-24 MGKQARLYMVRSTQGALYDVFFERGVAALAWPMLAEAAAKGFGREELTDIYRSAVPDVKL RTAQSGAAQMWRFVNELADGDAVLTYSPALRRYRVGRITGRAVHCPQWDDEKMSLVRPVE WLGEVCRDDLSVAAQRALGSVTTLFAVSEACAAEIFERVGFQTA >gi|241320168|gb|ACQV01000018.1| GENE 118 121428 - 122279 961 283 aa, chain + ## HITS:1 COG:NMA0055 KEGG:ns NR:ns ## COG: NMA0055 COG0668 # Protein_GI_number: 15793086 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis Z2491 # 1 280 41 320 328 410 76.0 1e-114 MWNTIQDWLNALPVSEEIIKSALMIVAIIAGRSILLSAHFRSHPDLSIENKRRSLVVSRN ITMLLLLFGLAMIWAAQIQTLALSMFAVAAAIVVATKELIMCLSGSILRSVTKQYSIGDY IEINGLRGRVVDINMLNTLMMQIGPNPLVGQLSGKTLSFPNSLLLSHPVRRDNILGDYVI HTVEIPVPIHLDSDEIIGRLKDVLEPLCEPYVPAIKQHLENVQTQKLFITPAAQPRVSRV PHDDKVYNIIVRFASPVAKRLEIQQAVLDEFLRTQYQLINKLK >gi|241320168|gb|ACQV01000018.1| GENE 119 122349 - 123215 1201 288 aa, chain + ## HITS:1 COG:no KEGG:Vapar_0507 NR:ns ## KEGG: Vapar_0507 # Name: not_defined # Def: hypothetical protein # Organism: V.paradoxus # Pathway: not_defined # 1 256 1 254 267 249 45.0 1e-64 MLPESALAEMYPVIMTPSHDGKYFHNYTLSLLNIVHTNASLGLPLQVMMQRGESLITRAR NNCVARFLENKEWTHLFWIDSDIGFSPDSFYRLLLADKDVVAGIYPLKRENWPEEGVPAG TTQADFERMYTSYTVNTSEKNENGEIVLKVDEDGFMKVHDAPTGFMVIKRSVFEKMMAAY PELNYISDSDYNREDKGLHYRFFDCMVDPESKRYLSEDYTFCHLWRQIGGDVYVDVQSNL THQGAKVYRGSFAESLQTNIANAVFAPKGTPMRLELAAPLHANPRGAE >gi|241320168|gb|ACQV01000018.1| GENE 120 123337 - 125373 3352 678 aa, chain + ## HITS:1 COG:NMB0214 KEGG:ns NR:ns ## COG: NMB0214 COG0339 # Protein_GI_number: 15676140 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Neisseria meningitidis MC58 # 1 677 1 677 678 1200 88.0 0 MSDNVLLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQTHTDWANTVEKLTDIT ERVGRIWSVVSHLNSVVDTPELRAVYNELMPEITIFFTEIGQDIELYNRFKIIKNSAEFN TLSQAQQTKLNHDLRDFVLSGAELPPEQQAELAQLQTEGAQLGAKFAQNIQDATDAFGIY FDDAAPLAGIPEDSIAMFAAAAQSEGKTGYKIGLQIPHYLAVIQYADNRELREQIYRAYV TRASELSDEGKFDNTANVEQTLANALKTAKLLGFKNYAELSLATKMADTPEQVLNFLHDL ARRAKPFAEKDFAEIKAFARESLNIEDPQSWDLSYAAEKLRQAKYAFSETEVKKYFPISK VLAGLFAQIKKLYGIELAEKTVPVWHKDVRYFELKQDGQTIGGVYMDLYAREGKRGGAWM DGYKGRRRFADGTLQLPTAYLVCNFTPPVGDKEARLSHDEIITLFHETGHGLHHLLTQVD EVGVSGINGVEWDAVELPSQFMENFVWEYDVLAQMSSHEETGAVLPKELFDKMHAAKNFQ RGMFLVRQMEFALFDMEIYHQEDEGRLKEWPQILDKVRQEVAVTQPPAYNRFALSFSHIF AGGYSAGYYSYAWAEVLSADAYAAFEESDDVAETGRRFWKEILAVGGSRSAAESFKAFRG REPSLDALLRHSGFDNAA >gi|241320168|gb|ACQV01000018.1| GENE 121 125732 - 125995 340 87 aa, chain - ## HITS:1 COG:no KEGG:NMO_1729 NR:ns ## KEGG: NMO_1729 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 78 2 79 81 77 43.0 1e-13 MKQFEISNSVRKELSNYLNTHNLSLKSAMDNEITNGEVAAIVHAGLPAMIRKIYSLEKMK TFFWTKKDLMMEFINMRLVAGDKKGKN >gi|241320168|gb|ACQV01000018.1| GENE 122 126230 - 126649 475 139 aa, chain + ## HITS:1 COG:NMB0310 KEGG:ns NR:ns ## COG: NMB0310 COG1981 # Protein_GI_number: 15676228 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 139 2 142 142 175 70.0 2e-44 MYLWFKLLHVFFVISWFAGLFYLPRIYVNLAQLEPGSVEYIRLTDMSRRLYRFMSPLGWG TLIFGAAIGFVNNWWGNGWLAVKLLCGLLLLAYQLYCGLLLRRFQNGSNVYSHRWYRVFN ELPVLMMVAALYMVVFKPF Prediction of potential genes in microbial genomes Time: Thu May 26 11:37:37 2011 Seq name: gi|241320074|gb|ACQV01000019.1| Neisseria flavescens SK114 ctg1118407793854, whole genome shotgun sequence Length of sequence - 58444 bp Number of predicted genes - 59, with homology - 52 Number of transcription units - 35, operones - 16 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 265 - 1797 99.0 # FJ983092 [D:1..1534] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + TRNA 1904 - 1980 96.8 # Ile GAT 0 0 + TRNA 1986 - 2061 93.7 # Ala TGC 0 0 + LSU_RRNA 2563 - 5299 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 5396 - 5504 98.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 5253 - 5312 50.8 1 1 Tu 1 . + CDS 5531 - 5710 64 ## + Term 5741 - 5772 -1.0 2 2 Tu 1 . - CDS 5675 - 5830 71 ## - Prom 5855 - 5914 4.4 + Prom 5788 - 5847 3.6 3 3 Tu 1 . + CDS 5882 - 6169 370 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 6211 - 6249 3.3 4 4 Tu 1 . - CDS 6556 - 6816 128 ## - Prom 6908 - 6967 5.2 + Prom 6976 - 7035 5.3 5 5 Op 1 . + CDS 7063 - 9096 3117 ## COG0556 Helicase subunit of the DNA excision repair complex 6 5 Op 2 . + CDS 9125 - 9949 423 ## gi|241759538|ref|ZP_04757641.1| hypothetical protein NEIFL0001_0016 + Term 10017 - 10059 7.1 - Term 10534 - 10577 10.0 7 6 Tu 1 . - CDS 10716 - 12923 3360 ## COG0210 Superfamily I DNA and RNA helicases - Prom 12951 - 13010 5.9 - Term 12961 - 13012 14.2 8 7 Tu 1 . - CDS 13024 - 14052 1529 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 14222 - 14281 8.4 + Prom 14610 - 14669 7.9 9 8 Op 1 . + CDS 14829 - 16364 1998 ## COG0733 Na+-dependent transporters of the SNF family 10 8 Op 2 . + CDS 16364 - 16456 207 ## + Term 16475 - 16516 11.3 + Prom 16495 - 16554 2.8 11 9 Op 1 . + CDS 16689 - 18161 2136 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 18209 - 18253 8.1 + Prom 18179 - 18238 2.9 12 9 Op 2 . + CDS 18284 - 18901 808 ## COG0352 Thiamine monophosphate synthase + Term 19097 - 19145 7.1 - Term 18889 - 18931 9.1 13 10 Tu 1 . - CDS 19034 - 20053 1259 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 20080 - 20139 3.6 + Prom 20078 - 20137 6.0 14 11 Op 1 . + CDS 20158 - 20511 507 ## COG1733 Predicted transcriptional regulators 15 11 Op 2 16/0.000 + CDS 20542 - 20736 292 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 16 11 Op 3 . + CDS 20797 - 21585 1009 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis + Term 21595 - 21625 4.3 - Term 21581 - 21613 4.7 17 12 Op 1 3/0.100 - CDS 21657 - 22418 848 ## COG1573 Uracil-DNA glycosylase 18 12 Op 2 20/0.000 - CDS 22412 - 22855 186 ## PROTEIN SUPPORTED gi|114319714|ref|YP_741397.1| SSU ribosomal protein S18P alanine acetyltransferase 19 12 Op 3 . - CDS 22852 - 23526 1036 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone - Prom 23547 - 23606 3.0 20 13 Op 1 . - CDS 23689 - 24363 971 ## COG0625 Glutathione S-transferase 21 13 Op 2 . - CDS 24372 - 24767 541 ## NT05HA_1738 hypothetical protein 22 13 Op 3 . - CDS 24768 - 25934 1236 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 23 13 Op 4 . - CDS 25954 - 26199 432 ## gi|241759530|ref|ZP_04757633.1| protein gtlf3b 24 14 Op 1 . - CDS 26315 - 26734 569 ## CCV52592_1561 hypothetical protein 25 14 Op 2 . - CDS 26772 - 27680 1015 ## NT05HA_1736 dialkylrecorsinol condensing enzyme - Prom 27716 - 27775 3.2 - TRNA 27989 - 28064 97.8 # Phe GAA 0 0 + Prom 28129 - 28188 7.8 26 15 Tu 1 . + CDS 28270 - 28830 629 ## gi|225077464|ref|ZP_03720663.1| hypothetical protein NEIFLAOT_02527 + Term 28844 - 28885 8.8 27 16 Tu 1 . - CDS 28877 - 29389 896 ## COG0669 Phosphopantetheine adenylyltransferase - Prom 29415 - 29474 2.8 - Term 29443 - 29490 10.3 28 17 Tu 1 . - CDS 29497 - 30183 1068 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 30218 - 30277 3.9 - Term 30291 - 30332 9.6 29 18 Tu 1 . - CDS 30348 - 30623 625 ## COG2924 Fe-S cluster protector protein - Prom 30652 - 30711 4.2 + Prom 30671 - 30730 4.2 30 19 Tu 1 . + CDS 30753 - 33437 3316 ## COG1391 Glutamine synthetase adenylyltransferase + Term 33497 - 33554 15.2 - Term 33493 - 33532 9.1 31 20 Op 1 . - CDS 33544 - 33798 316 ## gi|284799431|ref|ZP_05983967.2| cell division ABC efflux transporter, permease protein FtsX 32 20 Op 2 . - CDS 33873 - 35300 1422 ## COG1808 Predicted membrane protein 33 20 Op 3 . - CDS 35288 - 35350 58 ## - Prom 35573 - 35632 6.5 + Prom 35317 - 35376 6.1 34 21 Op 1 . + CDS 35603 - 36697 1241 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 36716 - 36745 -0.7 + Prom 36726 - 36785 3.3 35 21 Op 2 . + CDS 36866 - 38929 2959 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 38953 - 38999 9.2 + Prom 38975 - 39034 3.6 36 22 Tu 1 . + CDS 39092 - 40171 1300 ## COG0489 ATPases involved in chromosome partitioning + Term 40308 - 40355 7.5 + TRNA 40230 - 40305 91.3 # Lys TTT 0 0 - Term 40446 - 40480 1.1 37 23 Tu 1 . - CDS 40483 - 41163 815 ## COG0842 ABC-type multidrug transport system, permease component 38 24 Op 1 . - CDS 41326 - 41736 617 ## NT05HA_1741 hypothetical protein 39 24 Op 2 . - CDS 41733 - 42647 354 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 40 24 Op 3 . - CDS 42676 - 43419 879 ## gi|241759520|ref|ZP_04757623.1| hypothetical protein NEIFL0001_0058 41 24 Op 4 . - CDS 43500 - 44498 1043 ## NT05HA_1739 hypothetical protein 42 24 Op 5 . - CDS 44570 - 45418 1194 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB - Prom 45439 - 45498 5.5 + Prom 45523 - 45582 6.2 43 25 Op 1 . + CDS 45614 - 46081 179 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 + Term 46091 - 46134 9.0 44 25 Op 2 . + CDS 46169 - 46267 93 ## - Term 46130 - 46172 5.1 45 26 Tu 1 . - CDS 46346 - 46963 945 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Prom 47128 - 47187 5.3 46 27 Tu 1 . + CDS 47302 - 48027 796 ## COG1385 Uncharacterized protein conserved in bacteria - Term 47780 - 47819 -0.8 47 28 Tu 1 . - CDS 47931 - 48110 125 ## 48 29 Tu 1 . + CDS 48135 - 48425 526 ## NT05HA_1742 acyl-carrier protein + Term 48625 - 48668 0.5 + Prom 48630 - 48689 1.9 49 30 Op 1 . + CDS 48851 - 49480 442 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 50 30 Op 2 . + CDS 49462 - 50151 424 ## NT05HA_1744 hypothetical protein + Term 50215 - 50254 10.0 - Term 50203 - 50242 10.0 51 31 Tu 1 . - CDS 50262 - 51659 1011 ## gi|241759533|ref|ZP_04757636.1| hypothetical protein NEIFL0001_0070 - Prom 51689 - 51748 5.2 52 32 Op 1 . - CDS 51846 - 52352 984 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 53 32 Op 2 . - CDS 52407 - 52727 615 ## COG1965 Protein implicated in iron transport, frataxin homolog - Prom 52757 - 52816 3.0 + Prom 52706 - 52765 2.3 54 33 Op 1 . + CDS 52802 - 52972 278 ## NMO_0186 putative lipoprotein 55 33 Op 2 . + CDS 52989 - 54209 1768 ## COG0019 Diaminopimelate decarboxylase + Term 54227 - 54273 12.5 - Term 54267 - 54299 2.3 56 34 Op 1 2/0.200 - CDS 54311 - 54538 277 ## COG2900 Uncharacterized protein conserved in bacteria 57 34 Op 2 . - CDS 54540 - 55913 1979 ## COG2056 Predicted permease - Prom 55980 - 56039 6.9 + Prom 56132 - 56191 5.2 58 35 Op 1 5/0.000 + CDS 56267 - 57586 1582 ## COG0477 Permeases of the major facilitator superfamily + Term 57598 - 57650 16.9 + Prom 57634 - 57693 6.1 59 35 Op 2 . + CDS 57841 - 58443 237 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P Predicted protein(s) >gi|241320074|gb|ACQV01000019.1| GENE 1 5531 - 5710 64 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGAFYMPVGSIGLAIGDGVRGARILMNRYLLSVRAFLVFGLCMITLLLFLNKSTESYG >gi|241320074|gb|ACQV01000019.1| GENE 2 5675 - 5830 71 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLFQAVNTVTYADRATAHTHINAYAILTQISFDFKYSKQLTVTFSTFVQE >gi|241320074|gb|ACQV01000019.1| GENE 3 5882 - 6169 370 95 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 81 107 187 205 94 66.0 5e-20 MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEE LKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK >gi|241320074|gb|ACQV01000019.1| GENE 4 6556 - 6816 128 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLNISSPSVQLPFPFIFPHTTAVNDSFKRNTLGSASLSNATAFRVNFPSKIPLAWPLIL IQKPPASFTGSSGHFVDVSLKLPFFV >gi|241320074|gb|ACQV01000019.1| GENE 5 7063 - 9096 3117 677 aa, chain + ## HITS:1 COG:NMB1331 KEGG:ns NR:ns ## COG: NMB1331 COG0556 # Protein_GI_number: 15677197 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Neisseria meningitidis MC58 # 1 677 1 675 675 1285 98.0 0 MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA INEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIA TLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL HQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGD ASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSATPAKYEEEHAGQVVEQVVRP TGLVDPKIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL IQTIGRAARNVNGVAILYADKITDSMKAAIDETERRREKQIKFNEEHGIVPQQIKKQVKD IIDGVYHEEDGGKGRLKGKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAV LRDRIRDIKENLLFGAE >gi|241320074|gb|ACQV01000019.1| GENE 6 9125 - 9949 423 274 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759538|ref|ZP_04757641.1| ## NR: gi|241759538|ref|ZP_04757641.1| hypothetical protein NEIFL0001_0016 [Neisseria flavescens SK114] # 1 274 15 288 288 525 100.0 1e-147 MKYLQRYLTLEKFKWLCEDKGFFLAPLSRQSDPKEGIYDSQIPLDSVRDIVRDLFPSSKN SNPENLEAVKSTVNKWQNEMMKDNRDNVFISSWFIGEEESKEMWDNYSDNNGVILFSRTD LLYIESPEYLRKLGDSFVCKDVIYGDKEKSKINYQPAYYKNEEFLGEKEHRIIFDLNLFK MLTGQAECTAYIDNVPAHEYFQNSGAISKVNLDDCKEVLIPKGNGYIIKYNLSCVIKEVR VNAKASEQTKKEIQKLCKLNNLNFQESKLDYKYD >gi|241320074|gb|ACQV01000019.1| GENE 7 10716 - 12923 3360 735 aa, chain - ## HITS:1 COG:NMA0027 KEGG:ns NR:ns ## COG: NMA0027 COG0210 # Protein_GI_number: 15793060 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 735 1 735 735 1432 96.0 0 MFPNESAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQSGQTSVHS IMAVTFTNKAAKEMQTRLGAMIPVNVRAMWLGTFHGLCHRFLRLHHRDAGLPSSFQILDS GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRASVLSAPDPHTRRMIECYAEY DKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLIA GNHAAVFAVGDDDQSIYRFRGANVGNMTALMNEFHIDAPVKLEQNYRSVGNILAAANAVI ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALERDGWDLDEIAVLYRSN AQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINFPPRG IGARTIENLQTASSEQGITLWQAACNAGAKAAKVAAFVRLIEALRNQVGQMPLPEIIVGI LKDSGLTEHYETQKGDNQDRLDNLDELVNAAIEFKPEDSNFETLPENISDDPAFPILAFL SNAALESGENQAGAGEKAIQLMTVHAAKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLSVKKPAYDSYG SPRQTAAPKDKIIDDYKQPQTYAGFRIGQNVRHAKFGTGVIIDAVDKGESARLTINFGKQ GVKELDTKFAKLEEM >gi|241320074|gb|ACQV01000019.1| GENE 8 13024 - 14052 1529 342 aa, chain - ## HITS:1 COG:NMB0207 KEGG:ns NR:ns ## COG: NMB0207 COG0057 # Protein_GI_number: 15676134 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 342 1 342 343 607 87.0 1e-174 MGIKVAINGYGRIGRQVVRAIFDYKLQDQLDIVAINASGSIETNAHLTKFDTVHGRFNSE VSHDEKHLIIDGKKIPYFSTRNPAELPWGELGVDLVMECTGAFTSKEKAKIHLESGAKKV LISAPGGDDVDATVVYGVNDDVITDDMTVISNASCTTNCLAPVAKVLNENIGIVNGVMTT IHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKAVGLVLPDLKGKLDGLAIRVPTV NVSLVDLSFQAGRDTSAEEINALMKAASEEGRLKGVLAYNTLPLVSMDFNHTTQASTFDS TLTKVTAGKMVKVFAWYDNEWGFSCQMLNTARRMFGLEVRPF >gi|241320074|gb|ACQV01000019.1| GENE 9 14829 - 16364 1998 511 aa, chain + ## HITS:1 COG:NMA0470 KEGG:ns NR:ns ## COG: NMA0470 COG0733 # Protein_GI_number: 15793471 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 511 1 510 511 788 82.0 0 MSNSQSSERATFSSRRAFMFAAIGSAVGLGNIWRFPYIAFDNGGGAFILPYLVALLTAGI PLLLLDYAIGHRYRGSPPLAFRRLGRLFEPMGWWNFLTNVIICIYYAVIVGWAASYAYYS LTSAWGADPQTFFFKDFLQMADAKDLGLDFVGKVAGPLIAVWVFTLAIMALGVQKGVAGA STFFMPLLVVMFVIMVGIALTLPGAAKGLDALFTPDWNRLADPKVWVAAYGQIFFSLSIC FGIMITYSSYLKKKTDLGGTGLVVGFANSSFELLAGIGVFAALGFMAHAAGKEVSEVASS GIGLAFIAFPTIINQAPMGALIGVLFFGSLVFAGVTSMISIVEVIVAAIQDKMNIGRVSA TLIAGVPMAIISTLLFGTTTGLPVLDVLDKFINTYGIVASGFVYVLAIVLLHKLPELRNH LNALSSIRVGKVWTASVVVTVAMLGYMLYQDTAGLLKENYSGYPDSFLNIFGWGMVGALL VLSVLLSFLPWKHGQNFNVKDEHEHEREGDE >gi|241320074|gb|ACQV01000019.1| GENE 10 16364 - 16456 207 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTSAIIMMLVALIVIWGGFIVSVLRLPKE >gi|241320074|gb|ACQV01000019.1| GENE 11 16689 - 18161 2136 490 aa, chain + ## HITS:1 COG:NMB1999 KEGG:ns NR:ns ## COG: NMB1999 COG2239 # Protein_GI_number: 15677827 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Neisseria meningitidis MC58 # 1 490 1 484 484 797 89.0 0 MSIEQTPPNLDNTPDNDVVEDHISDDRISDDIDRIHALCEILEPSFEQIEAGVPIEDASL RDKFTELTVLLAELHPADVAAVLESLPPRERNIVWLLVAPEDDGEVLLEVSDAVRETLIE SMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEEREQVKAAMSYEDNQVGAI MDFELVSIRADVTCEVVLRYLRRFDSLPDHTDKIFVVDENDVLQGVLPIRKLLVADPEDM VADVMATEVVRFRPEDDVEEAAQAFERYDLVTAPVVDENKKLIGRITIDEMVDVIREESE ADMLNMAGLQEEEDLFAPVWDSVKNRWMWLAINLCTAFIASRVIGAFEGSIEKIVALAAL MPIVAGIGGNSGNQTITMIVRAMAMGQMTSTQAGRLLKKEIGVALVNGIIWGTVMGVISW LLYGNIGIGLVMVAAMTLNLLLAATVGVLIPVMMDKAGRDPALGSSVLITAVTDSGGFLI FLGLATMFLL >gi|241320074|gb|ACQV01000019.1| GENE 12 18284 - 18901 808 205 aa, chain + ## HITS:1 COG:NMA0363 KEGG:ns NR:ns ## COG: NMA0363 COG0352 # Protein_GI_number: 15793371 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 204 1 204 205 358 94.0 5e-99 MTFLPLKSPLKFYAVVPTADWVERMVKAGADTVQLRCKTLHGDELKREIARCVAACRGGR TQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAADLRLGLSTHSVAELDRALSVHP SYVASGAIFPTTTKQMPTAPQGLDKLREYVKQAGGTPVVAIGGIDLNNAEDVLATGVSSL AVVRAVTEAENPEAVVKAFQALWDE >gi|241320074|gb|ACQV01000019.1| GENE 13 19034 - 20053 1259 339 aa, chain - ## HITS:1 COG:mlr7750 KEGG:ns NR:ns ## COG: mlr7750 COG0604 # Protein_GI_number: 13476432 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mesorhizobium loti # 1 337 27 363 363 390 58.0 1e-108 MKAIGFNRPLPVSNPEALLNINLPEPELRPHDILVAVQAVSVNPVDVKVRAAHTPAAGQY RVLGYDAAGIVQAVGSEVRNFKVGDEVYYAGAINRQGSNAQLQAVDARIAAKKPRSLDFA QAAALPLTAITAWETLFDRLDVNKPVAGGANALLLIGGAGGVGSLAIQLLKKLTDIQVIA TASRPESRAWVKELGADFVINHHENMAERVAALNIGAPSFVFSTNHTDRHLPQIVELIAP QGRIALIDDPETLDVNPLKGKSLSLHWEFMFTRPLRETADIERQGEILAETARLVDEGII RPTATQILHGINAANLRRAHEMLERGDMIGKLVVEGWDN >gi|241320074|gb|ACQV01000019.1| GENE 14 20158 - 20511 507 117 aa, chain + ## HITS:1 COG:mll7749 KEGG:ns NR:ns ## COG: mll7749 COG1733 # Protein_GI_number: 13476431 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 108 1 107 120 142 62.0 1e-34 MPRTPHPSYDCAEGCSVEAALSVIGGKWKGTILYRLHTDGTLRFNQIRRILPDVSQRTLT AQLRALEADGIILRTVYPEVPPRVEYRLTDYGKTLAPVLTALKEWGDGFKQEQAHRE >gi|241320074|gb|ACQV01000019.1| GENE 15 20542 - 20736 292 64 aa, chain + ## HITS:1 COG:NMB2070 KEGG:ns NR:ns ## COG: NMB2070 COG2104 # Protein_GI_number: 15677892 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Neisseria meningitidis MC58 # 1 64 1 64 64 103 93.0 6e-23 MNIILNGEPAELHGTTVADLIAQTAPQKPFAVAVNTGFVAKGAYAETVLNENDKVDIVRP VVGG >gi|241320074|gb|ACQV01000019.1| GENE 16 20797 - 21585 1009 262 aa, chain + ## HITS:1 COG:NMB2071 KEGG:ns NR:ns ## COG: NMB2071 COG2022 # Protein_GI_number: 15677893 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Neisseria meningitidis MC58 # 1 262 1 262 262 490 95.0 1e-138 MLTLYGETFPSRLLLGTAAYPTPEILKQSVQTARPAMITVSLRRAGSGGEAHGQGFWSLL EEIGIPVLPNTAGCQSVQEAVTTAQMAREVFDTDWIKLELIGDDDTLQPDVFQLVEAAEI LIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTGLGTVHAYALKVLRERLPDTP LIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSSDPVNMARAFALAVESGRLAYEAEPVE AREKARASTPTVGQPFWHSAEY >gi|241320074|gb|ACQV01000019.1| GENE 17 21657 - 22418 848 253 aa, chain - ## HITS:1 COG:NMB1873 KEGG:ns NR:ns ## COG: NMB1873 COG1573 # Protein_GI_number: 15677708 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 252 1 242 245 168 43.0 8e-42 MLSSRYLHLHEALGLGPMWLNQNAKIIHAAPQAAAASVRPKTIVADTAQAVRTLSAGAHQ ARTAAIATAQTAKPAVRVPEAAPKTIVETPAKTEKAAHSDNLPRLDVTIRPSEIMVVSIC PSTEDSLHGTLFSGDVGTLLDNILAAIGLKPEQAHKTAWVKTAPVFTALPDAEHIRSELA EMQNELTTSQARAVLFLGKIFDSPDMIGLMNELCAERPHFVIPHPARLLMQPQLKAQAWQ ILKPLKQLLAKAV >gi|241320074|gb|ACQV01000019.1| GENE 18 22412 - 22855 186 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|114319714|ref|YP_741397.1| SSU ribosomal protein S18P alanine acetyltransferase [Alkalilimnicola ehrlichii MLHE-1] # 1 145 5 152 161 76 32 4e-13 MNPRPAVLADCPTLAAIDAQGNPSSWTVKQFESAVQHHPDSIWLSQADNQITGFIVWQTV FDESELHLIAVAPEYRRQGIASALLQHWQNAVQQQGANRLLLEVRASNETAQQLYRKHGF QTCGRRKNYYALPDGGSEDAVLMEKSC >gi|241320074|gb|ACQV01000019.1| GENE 19 22852 - 23526 1036 224 aa, chain - ## HITS:1 COG:NMB1871 KEGG:ns NR:ns ## COG: NMB1871 COG1214 # Protein_GI_number: 15677706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Neisseria meningitidis MC58 # 5 224 6 225 225 293 71.0 2e-79 MPTDNRPTLAIDTSTSFLSIALEHQGEIRLFHENVGTKQSEQILPQIERLFKEAGITAAD LGYIVYAQGPGAFTGLRIGAAVAQGLATPFDTPMIGIPCLDAAASLLPPSSCVLAATDAR MGEVFYAWFDTQNHVRLSDYTVGKAAAITAPEGKTPSGGIGNAFALADKPPFDGQADMPT ATDYLKLARSGRYVATDAAHAELLYVRNKIALTAQEQAQQKAKP >gi|241320074|gb|ACQV01000019.1| GENE 20 23689 - 24363 971 224 aa, chain - ## HITS:1 COG:CC2843 KEGG:ns NR:ns ## COG: CC2843 COG0625 # Protein_GI_number: 16127075 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Caulobacter vibrioides # 1 216 1 215 220 199 46.0 3e-51 MITLHSLDQSRALRIVWLLEILGTPYRLQTYRRNPDTLLAPDELKAIHPLGKSPLLDDDG FILAESGAITDYLIQTYGNGRLMPERGSREYWQYQRWLHYTEGSLMPLLLLGLVFRRIES APMPFFVKPIARKISGSVKSSFIHPQAALHLAHIDSELENREWLVGNSLSGADIMMSYPL QAAADRFDFADYPNIRAYLQLIEAHEAYRRAVEKAGSPLLKLDQ >gi|241320074|gb|ACQV01000019.1| GENE 21 24372 - 24767 541 131 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1738 NR:ns ## KEGG: NT05HA_1738 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 127 1 127 129 147 52.0 1e-34 MKIDDIPQDNSASYHGHRKVIYGTRDGHYEAATSNGWQDEAYATEMAVCELDTQTQTARE AVEKGEYSPLYYHMFRCRYDETGLAMAAGVWKWQLRRHFRPEVFAKLPAKTLQKYADACQ ISIDDLKQTNI >gi|241320074|gb|ACQV01000019.1| GENE 22 24768 - 25934 1236 388 aa, chain - ## HITS:1 COG:CC0865 KEGG:ns NR:ns ## COG: CC0865 COG0332 # Protein_GI_number: 16125118 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Caulobacter vibrioides # 1 385 21 398 399 251 40.0 2e-66 MTSNNTLKDVYLNRVSAFLPNAPVGNDEMEAVLGMAGDVPSRVRRMILRSNGILSRHYAI DPESRRTTHTNAELAAEAVNGLFAQGVPAEAIGSLACATSYPDQTMPGHGVMVHGLLDMP PCEVFSMAGVCAAGMAAMKHAYNAVRTGEHAHAVSVASENASAVMRGEVFQSETDHKKLE NASPEIGFEKDFLRWMLSDGAGAVYLSDRPNSDGLSLKIHWIDLLSYANEMPPCMYAGAE FRDGVFEGWKHADADYGRRHSLMAVKQDVKLLNENIVRYTVEKPLSQIATKHGIRAEEID WFLPHYSSGFFRDRLSDGLKNIGFDIPQEKWFTNLHSKGNTGSASIYIILEEFLRTFPIE HGQKILCYVPESGRFSTCFMLLEAVKAV >gi|241320074|gb|ACQV01000019.1| GENE 23 25954 - 26199 432 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759530|ref|ZP_04757633.1| ## NR: gi|241759530|ref|ZP_04757633.1| protein gtlf3b [Neisseria flavescens SK114] # 1 81 1 81 81 166 100.0 4e-40 MPEVIHYPERRRFQIDIDGLEAGYISYTEHNGGWDINHTEVSPNFRHRGIAKLLVDALME YAETHYIPLTASCDYAARFIG >gi|241320074|gb|ACQV01000019.1| GENE 24 26315 - 26734 569 139 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1561 NR:ns ## KEGG: CCV52592_1561 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 7 131 10 135 140 165 61.0 4e-40 MDDFERIYRDWHEYAKNRDTDALIALYADDAVFESPLVLAIMNTDSGILCGKAEILRFLQ EGTRRRPNDLVRWYRDGRYFVAGDTLVWEYPRQTPDGDQVDILEVMRLEGGKIKHHRIYW GWFGTQMLTASALAKAVKA >gi|241320074|gb|ACQV01000019.1| GENE 25 26772 - 27680 1015 302 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1736 NR:ns ## KEGG: NT05HA_1736 # Name: not_defined # Def: dialkylrecorsinol condensing enzyme # Organism: A.aphrophilus # Pathway: not_defined # 2 301 6 304 305 321 55.0 2e-86 MKKVLIVHYSQTGQLSSLARNFAAPLQTAGIQVDCVNIVPEQAFPFPWPFWRFFDTFPET VHLKPAPILPPQIPSEDYDVVVIAYTVWFLSPSQPMTAFLQREETRHLLDGKPVITLIGC RNMWLGAQEKMKSLLKQNGAKLIGNIVKIDACNSAASFITTPAWMLTGDKRYFRSLPSAG IAEEELVDAARFGTKLRDTLLNQQPLDETLFQNMGAVTVNEKLIFSERAAGRSFFVWGKL LMAAGRISPLLRRALLCFYIVFLLAMILVVLPVSVILKKLLHPLLKGRLKKLADYYGQPS GG >gi|241320074|gb|ACQV01000019.1| GENE 26 28270 - 28830 629 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225077464|ref|ZP_03720663.1| ## NR: gi|225077464|ref|ZP_03720663.1| hypothetical protein NEIFLAOT_02527 [Neisseria flavescens NRL30031/H210] # 1 186 27 212 212 260 98.0 3e-68 MLYVFVRDMWDVLRLRYRSPETYLYSPLVMAAVLLLLGVVNAASMSPLFGSGAAAVCLSV ILVIVKWLVLSRSMRKVLHYYGAPQLPLWGFILVSEALLLPLLLVLYVPALAAFALLWQA WVFVVQVRGLMWMGNATVGRVLVGYLLYGIGVLCVGTVILMLFIAAGWLDMETLNQNLQA LMSARK >gi|241320074|gb|ACQV01000019.1| GENE 27 28877 - 29389 896 170 aa, chain - ## HITS:1 COG:NMA0421 KEGG:ns NR:ns ## COG: NMA0421 COG0669 # Protein_GI_number: 15793426 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheine adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 1 167 1 167 170 263 77.0 1e-70 MTTTTPRRAVYAGSFDPPTLGHLWMIQEAQSLFDELIVAIGTNPEKRSTYTIEERRAMLD AITHPFPNVRISVFENRFLVDYAREANANFIVRGIRSAADYEYERSMRYINSDIAPEIST VFLMPPREIAEVSSTMVKGLVGPQGWRDMIGRYLPDPVYQKILQDHETNA >gi|241320074|gb|ACQV01000019.1| GENE 28 29497 - 30183 1068 228 aa, chain - ## HITS:1 COG:NMA0420 KEGG:ns NR:ns ## COG: NMA0420 COG0670 # Protein_GI_number: 15793425 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Neisseria meningitidis Z2491 # 1 228 1 227 227 253 71.0 3e-67 MQNDVYDYTSQGSVAKNTVLQKTYRLLGLSFIPAVAGAFFSAKTGFNIFAMFGSYYVALA AFFGFFYGMTFLIEKNRYSNVGVALLMIFTFGMGLAISPMLQYALAINNGAQIVGTAAAM TAGVFFTMSAMARRTTMNMNKLGSFLGAGAIVLMIAVVANIFLNIPALSLTIAAGFVVFS SLMIMWQVRTVIDGGEDSHISAALTIFISIYNIFSSLLRILISISGDD >gi|241320074|gb|ACQV01000019.1| GENE 29 30348 - 30623 625 91 aa, chain - ## HITS:1 COG:NMA0419 KEGG:ns NR:ns ## COG: NMA0419 COG2924 # Protein_GI_number: 15793424 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 88 166 95.0 8e-42 MTRMVHCVKLGKEAEGMKFPPLPNELGKRIFENVSQEAWMAWTRHQTMLINENRLSLADP RAREYLAQQMEQYFFGDGADAVQGYVPQEPK >gi|241320074|gb|ACQV01000019.1| GENE 30 30753 - 33437 3316 894 aa, chain + ## HITS:1 COG:NMA0035 KEGG:ns NR:ns ## COG: NMA0035 COG1391 # Protein_GI_number: 15793067 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Neisseria meningitidis Z2491 # 2 890 4 892 896 1665 94.0 0 MNRLDTARRYSLFLARNLDSGKLKPEIFLPMLDKVLTEADFQAFADWDKIRAEENEEELA RQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAVNTALDFSYAYYQDMYGTPIG RYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESGDTDGRRERGNQEFFTKVGQKLI ALLNDITADGQVFRVDMRLRPDGDSGALVLSETALEQYLITQGREWERYAWCKGRVVTPH PNDIKALVRPFVFRKYLDYSAYEAMRNLHRQIRSEVSKKGMADNIKLGAGGIREVEFIAQ IFQMIRGGQMRALQLKGTQETLKKLAELGIMPSENVETLLAAYRFLRDVEHRLQYWDDQQ TQTLPSSPEQQQLLAESMGFDSYAAFSDGLNVHRNKVNQLFNEILSEPEEQTQSNSEWQW AWQEKTDEEERQGRLKEHGFDAETIAARLDQIRNGHKYRHLSVHAQPRFDAIVPLLVQAA AEQPNPTDTLMRLFDFLENISRRSAYLAFLNEHPQTLAQLAEIMSQSSWVAAYLSKYPIL LDELISAQLLDTAFDWQTLAAALSNDLKACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGL WTVESLSDQLSALADTILAAALPCAWADMPKKHRDTPQFAIIGYGKLGGKELSYSSDLDL VYLYDDPHSDAGDVYSRLARRLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEK YQRENAWTWEHQSLTRARFICGTPGIQTAFDRIRTEILTAERDQTALADEIIEMREKMFP THPPVDSNVKYARGGVVDVEFIVQYLILAHARRYPQLLDNYGNIALLNIAADCGLIDKTL AEQSRTAYRFYRQQQHNTKLRDAKKTEVTDELLTHYGNVRKLWQEVFGAEVKFG >gi|241320074|gb|ACQV01000019.1| GENE 31 33544 - 33798 316 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284799431|ref|ZP_05983967.2| ## NR: gi|284799431|ref|ZP_05983967.2| cell division ABC efflux transporter, permease protein FtsX [Neisseria subflava NJ9703] # 25 74 15 64 76 97 96.0 3e-19 MRRYAEVKPKFAFFQEQRKRFAIDLAFGLNYMNAIPKVLAWIYEWVEDTALWIKAGITGS GALLWLAGNFLEKPAETEQEEEEE >gi|241320074|gb|ACQV01000019.1| GENE 32 33873 - 35300 1422 475 aa, chain - ## HITS:1 COG:SP1264 KEGG:ns NR:ns ## COG: SP1264 COG1808 # Protein_GI_number: 15901124 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 49 306 22 277 347 214 43.0 3e-55 MQELEQENSKKQEVADNVAMTKLQDVFNLAHDQAHPDKIDSVIRANTRVSGTNMWVLIFA IAVASIGLNVNSTAVVIGAMLISPLMGPIVGMGYGLAVGDTTLIRQAARNIIIFVVISLI TATLYFLLTPLKEAQSELLARTQPTLWDVLIAFFGGSAGIVAQTRKEGGNAIPGVAIATA LMPPLCTAGYGLAHGNWQYFFGAFYLFAINCVFITFSTLLFSKLLKLPRRGLVTESKRRL QSIIITAVVLAVMIPSGYMASGLVRQEIFNTKANSAIATAQQQEGFFVLRKILNHRENMV GLIVNGTGNAEKISALLVKSLEVSGVKAPKVNVVYAGGDDAKIEELLASRNNSAQQQNEL KEQQAYIDTVLAGKTAGADDAAVLKELKAQYPEAEKIVVGRGLVWEKAQTAPTTQEQPES SQNKQADISNDIVVVSLEFKEPLPAKDHERLQAWLNQRYEGTAVRLLVNAKVLDK >gi|241320074|gb|ACQV01000019.1| GENE 33 35288 - 35350 58 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSLGSTLFILGIKVRTCKN >gi|241320074|gb|ACQV01000019.1| GENE 34 35603 - 36697 1241 364 aa, chain + ## HITS:1 COG:NMA0364 KEGG:ns NR:ns ## COG: NMA0364 COG0665 # Protein_GI_number: 15793372 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 361 1 363 366 529 78.0 1e-150 MSKVAVLGGGLSGRLMAFQMAEQGISVELFEKGERNGAQAAAYVAAAMLAPSAEAVEATP EVIRLGKQSIALWRAIVGRLNTPVMMQENGSLIVWHTQDKPLSAEFARHLKRGGVAEHET IRWNADEIAANEPQLAGRFSDGLYLPTEGQLDGRQVLNALADALESMNVACHWSCEREVE DLAAQYDWVIDCRGYGAKSAWNRPSESVLRGIRGEVARVYAPEIELSRPVRLLHPRYPLY IAPKENHIFVIGATQIESESQAPASVRSGLELLSALYAVHPAFGEANLLELATGLRPTLN HHNPEIRFNRERRLIEVNGLFRHGFMISPAVTGAAVRLVGALFAGNDIPESDETSGLPYI RAAN >gi|241320074|gb|ACQV01000019.1| GENE 35 36866 - 38929 2959 687 aa, chain + ## HITS:1 COG:NMB1930 KEGG:ns NR:ns ## COG: NMB1930 COG0751 # Protein_GI_number: 15677760 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 687 1 687 687 1131 95.0 0 MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIDGAAEFTAYASPRRLAVQV KNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAKIEDLTIINDGKQDVYAYE YVQTGKPLGELLVDIINQAVKKLPIPKVMRWGSSTFTFVRPVHGLIVLHGSDIVNVSVLG LQSGNKTLGHRFLSSGEIAIENADSYAAQMREQGKVEASFAERKAAIQTALNEQAGRLKA TVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMN RFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFFYKQDQKATLESRLPKLSSVVYHNKIG SQAERIERLQSIAAHTAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARL NGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYA LRRSALGILRMLMQYGLDVNELIQTAFNSFPKGLLNEKTPSETADFMQARLAVLLQNDYP QDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLLKKADAELGAVNE SLLQQDEEKALYAAAQGLQPKISAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAA VKQNRLNLLNRLAEQMNAVADIALLSE >gi|241320074|gb|ACQV01000019.1| GENE 36 39092 - 40171 1300 359 aa, chain + ## HITS:1 COG:NMA0611 KEGG:ns NR:ns ## COG: NMA0611 COG0489 # Protein_GI_number: 15793601 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Neisseria meningitidis Z2491 # 1 359 17 375 375 573 83.0 1e-163 MNIPAIRTALDAVLIPHTMRTLGSEKAVTLLEERSDGLHIGLKFAFPVAHIAVDIANALQ EAVMAHTGDTHIHLSIDTEIGTHKVQPGVATIKGVKNIIAVASGKGGVGKSTTTANLATA MARMGARVGVLDADLYGPSQPTMLGVQDRKPDQQNKKLIPVEAESGIQVMSIGFLVDTDQ AVVWRGPMVSQALQQLMFQSEWDNVDYLFIDLPPGTGDIQLTLSQKIPVTGSVVVTTPQD IALIDARKAVDMFNKVNIPILGVLENMSVHICSNCGHTEAIFGAEGGKNLAERLNVPLLG QLPLSLPVREAMDSGTSSALFENNQAIADIYTEAAFQIALAIADKGKDFSSRFPKIVVE >gi|241320074|gb|ACQV01000019.1| GENE 37 40483 - 41163 815 226 aa, chain - ## HITS:1 COG:BS_yfiM KEGG:ns NR:ns ## COG: BS_yfiM COG0842 # Protein_GI_number: 16077899 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Bacillus subtilis # 8 223 195 396 396 64 25.0 1e-10 MLEEHYLSAGSGKVEKPNAVQHSVPAWLIFGMFFIMIPLSNVMALERQTNTITRLRLARA SASGLIAAKLIPYFLINQLQFVGMLLLGRYLLPEIGVPALILNGSLVPYALLSAAVSAAA LGYALLISVCAKSTEHAVVLGGGGIILMAAIGGIMVPAHVMPETMQQLTWISPMAWGLKA FQELLLNRSGLDGIGRYLLFLSAFSFATLTAAVLVYRRQLQTQVRF >gi|241320074|gb|ACQV01000019.1| GENE 38 41326 - 41736 617 136 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1741 NR:ns ## KEGG: NT05HA_1741 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: ABC transporters [PATH:aap02010] # 1 136 1 135 413 106 43.0 3e-22 MTTSSLLKELKLLCRDLHGLAVLFVMPIAFMLIMSLALSRDQDPHTDSRIALVGSTDDSI NTTLAAALEKEQIHVTLMPSEKLTDAQNGLHDKRFQLVLHNPNAASGKIADNKALQIYVP PDTEPSWLAAVKGVLQ >gi|241320074|gb|ACQV01000019.1| GENE 39 41733 - 42647 354 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 2 293 9 307 309 140 31 1e-32 MIQIQSLSHRYPKTETAALDNVSFDIADGECLGLLGHNGAGKTTLMSLLAGLQEVRQGEI LFDGKPLRLLGRSERQKIGLVPQDFAFYPQLSVWDNLLFFASLYKVRDKGRLNALLEQTN LTAHKNKAAKHLSGGLKRRLNFAIGLINTPQLVFLDEITVGIDPQSRRFILDSVADLTRQ GVTVVYTSHYLSEIEQLCGKIALLQHGKLVYHGGLDELLSTQTGVVRFTVEPPLPPQTLT ALGAKQVDSRGMMETAHDAAAVYAALQQSGAQIRYFQQGHGSLETFYLDFLRKDEPATDK QNPQ >gi|241320074|gb|ACQV01000019.1| GENE 40 42676 - 43419 879 247 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759520|ref|ZP_04757623.1| ## NR: gi|241759520|ref|ZP_04757623.1| hypothetical protein NEIFL0001_0058 [Neisseria flavescens SK114] # 1 247 1 247 247 505 100.0 1e-142 MRYLATVLFLCSALTHAAPPDGFALVHDADGHTNLRESPDLNARVLAKIPNGTPLKCLGD GGEGSLSFCTAQLQQPAAEDYGFIHYSRLIFPASDKSFARLREQSGHDDTLTLSGSGQKV HIVARRIHPKLSDFSGINKDKYTARLYRGKPFYGTDYDIPKSVFALERITLNGQAVPAAE LQGLFSPDFASTARGSNVYQGWEAYYRRSDKTLYLFGRQGSDGAPFDVCFIFKDGKFQRR YLWSGVI >gi|241320074|gb|ACQV01000019.1| GENE 41 43500 - 44498 1043 332 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1739 NR:ns ## KEGG: NT05HA_1739 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 6 330 4 326 329 474 67.0 1e-132 MTTQEFPHQHTAHCESGVMSTLLKYHGHNLDEAMIFGIAHALTFVWMPLIKLNGMPLVSY RTAPRSIIKNTCKALGLKLSVRKFSDAQSGQAALDAALSSGKLAGLQTSVFWLPYFPPQM RFHFNAHNLLVYGKDGNDYLISDPVFETVQRCAAEDLQRARFAKGVLAAKGMMYTLEDNR PSEKIMADLPAIIRKAIRKNAKHMLAPVFFIGVKGIRTLAKKIESLPAKQNDKYQKLFLG HLVRMQEEIGTGGAGFRYIYAYFLEQAAHICNEPAFQTASEQMTAIGDQWRQFAAICVKQ CKKPSENGCRNIAEFLRKIADNEEALWRGLLK >gi|241320074|gb|ACQV01000019.1| GENE 42 44570 - 45418 1194 282 aa, chain - ## HITS:1 COG:NMB0208 KEGG:ns NR:ns ## COG: NMB0208 COG2878 # Protein_GI_number: 15676135 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Neisseria meningitidis MC58 # 1 279 1 275 279 319 68.0 3e-87 MTIPIQSISRLLPQTQCRECGYEGCLPYARALSTGEAPVNLCTPGGETVMKDIADLLGKP YLAPAKTQIKAVALIDEAICIGCTACIRACPVDAIMGASKLMHTVISDECTGCGLCVTPC PVDCIDMVPVSQSFLPSARRFSTSAEPRFAAAEHAQSRFERHTARKQRDDAERKALLAQR EAAVKAKQAAQAQTQTAAPSAAFNPMDLIAKAMAKAQSQQDKLVSSGNREDFKARQIEEA KERAELRRAQRDAKYGNEAEKAAAIEFLRRYKAEQEAAKEAR >gi|241320074|gb|ACQV01000019.1| GENE 43 45614 - 46081 179 155 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 130 2 134 134 73 35 2e-12 MTATLCPCQSGRVYTECCAPFHAREAAAATAEELMRSRYSAYVLQEIDYIVDTTVPEQQN LLDKQDLAVWSKQTQWSGLKVIRHVPFGKLHALVEFEAYFEENGQTECHHELSAFVKIDG RWYFIDPTVALPTMKQPCLCGSGKKFKACCGQFFK >gi|241320074|gb|ACQV01000019.1| GENE 44 46169 - 46267 93 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MANTLRENVLLAAPPKRDERAVLCQRLVFYRF >gi|241320074|gb|ACQV01000019.1| GENE 45 46346 - 46963 945 205 aa, chain - ## HITS:1 COG:NMA0529 KEGG:ns NR:ns ## COG: NMA0529 COG0483 # Protein_GI_number: 15793526 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis Z2491 # 1 205 58 264 264 370 85.0 1e-103 MLGEEMSVQEQTRLWNEHSDGLWIVDPIDGTNNFVNGLPHFAVSVALVKNGHAELGVIYN PVSGECFYAERGKGAFLNGTPLPLRSENKKLNESIAGVEIKYLRSGKLASRMNTLAPFGT IRSMGSSTLDWCYLASGRYDIYIHGGQKLWDYAAGALIFEEAGGCLTTLEGDDFWSGEHV FKRSVIAALQPELFQQWVKWIRENQ >gi|241320074|gb|ACQV01000019.1| GENE 46 47302 - 48027 796 241 aa, chain + ## HITS:1 COG:NMA0528 KEGG:ns NR:ns ## COG: NMA0528 COG1385 # Protein_GI_number: 15793525 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 241 1 241 241 340 70.0 1e-93 MPRFYVDFALSPDSVVELPDNVVRHLNVLRVKNTEEIVLFNGNGKAYPALPEVLEKRCAS VRILREEATDNESPLNITLVQAVSAAERMDFTLQKSVELGVAEIRPVISERCVVRLSGER AEKRVARWQEIVVSACEQSGRNIVPKVLPLMTYAQALQQLPQETAKLLMSLNRAQKLSDV RPQSGKVVFMVGPEGGWTEKEEQQAFDAGFQSVTLGKRVLRTETASLAAIATMQTLWGDF A >gi|241320074|gb|ACQV01000019.1| GENE 47 47931 - 48110 125 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQQLVLAKLATLVLAKLATLVFRRPELYAKSPQSVCMVAMAASEAVSVRNTRFPSVTD >gi|241320074|gb|ACQV01000019.1| GENE 48 48135 - 48425 526 96 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1742 NR:ns ## KEGG: NT05HA_1742 # Name: not_defined # Def: acyl-carrier protein # Organism: A.aphrophilus # Pathway: not_defined # 1 94 1 93 96 103 65.0 1e-21 MSYTFTLAEYELEAELKKLIVQEADKADDVDMDDFTDDALLFGDDSPVGLDSLDALQISV ALQQYFQVRLQGDRMVRKHMMCVRDLAAFIRAEHGA >gi|241320074|gb|ACQV01000019.1| GENE 49 48851 - 49480 442 209 aa, chain + ## HITS:1 COG:HP0558 KEGG:ns NR:ns ## COG: HP0558 COG0304 # Protein_GI_number: 15645183 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Helicobacter pylori 26695 # 3 206 184 410 412 80 29.0 2e-15 MRDGAERAFVLGIENLNRLTLLHFHSLGLLAEQYRPFGRNGLILGEGVAALALSSAAPES SSGRLKLIGHAANTGNDLIQSDGQAQEQVMRRALDIAGIAPESITAVKTHGIGTADSDAA ELVALENIFGTLPPLMAFKPKIGHTLGATAALETALLLSALKQGGSSDYQGREICFSECA ASQEGGFFCLANQFGFGGSNTSLVWQWQP >gi|241320074|gb|ACQV01000019.1| GENE 50 49462 - 50151 424 229 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1744 NR:ns ## KEGG: NT05HA_1744 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 27 178 19 165 202 96 38.0 7e-19 MAMATVNPNIRITAAVRFDTDAGTGGKILKQTLKQQSGIDTRRLSRLSLIAALGAGQLKE QSEIHSDCAVFLGTPFSSPSVFEKMADNVLNHHAAMPFDFIANLHNSPVFHAAQALGTHG ATLVVAADNNIDTCFHPLLLAMQSVQNGGQAAVGWAYEHQAAHADTHEGSIWIVLEAGAE QGVPIVLNDEVMQADRPSEKPQYYWQNIADWIEEVMAHEGRDVKKYTLA >gi|241320074|gb|ACQV01000019.1| GENE 51 50262 - 51659 1011 465 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759533|ref|ZP_04757636.1| ## NR: gi|241759533|ref|ZP_04757636.1| hypothetical protein NEIFL0001_0070 [Neisseria flavescens SK114] # 1 465 1 465 465 614 100.0 1e-174 MKPFFCKTAIALSLTLPAAANAAEYVCNVEGITVYASYQINNTCRVVDTNTTTESGIVAE PNVFTESEPTNKSVTNGSAILNDMSTLKTVQTTEFKASTADYIHASQATPEVQTPVVVTR NEYGIPAPISIPIAQARLTSQIDKNAADGLAILSDTAVLDTAPTIKSEIDTTDVLNVMSA TTQPQTMAVQTPNNTPTPITQTLPTTSAIQLPQTIIQNPVVLPQTPDKTTAKQNNQTVIT SDEAIDKTPIKVETKRKGKAYTKTSTRYNAKNTNTGKTTVANTANEQTIKTVVAPTVESN VPNKPATTVSPVDQSKTSAQTPFPKAYTPAANIPFDPSNVYNDIKILPHIPITSVTNTAE AANPRLNITLRNHQNKSRSSSYSKYKAPVIRTAPVVTPAPKPSPKETRKQILQTEVRNEQ AAITHLQTQLNAAKQKGDQIKIQQLTRTINARKANIRAIQGEMSR >gi|241320074|gb|ACQV01000019.1| GENE 52 51846 - 52352 984 168 aa, chain - ## HITS:1 COG:NMA0463 KEGG:ns NR:ns ## COG: NMA0463 COG1854 # Protein_GI_number: 15793465 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Neisseria meningitidis Z2491 # 1 168 1 168 168 330 94.0 9e-91 MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPNQEILPEKGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQKVADAWLASMQDVLTVQDQSKI PELNEYQCGTYLMHSLAEAHEIAQNVLARKVAVNKNEELTLDESLLNA >gi|241320074|gb|ACQV01000019.1| GENE 53 52407 - 52727 615 106 aa, chain - ## HITS:1 COG:NMA0466 KEGG:ns NR:ns ## COG: NMA0466 COG1965 # Protein_GI_number: 15793468 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Neisseria meningitidis Z2491 # 1 106 2 107 107 187 93.0 5e-48 MTESEFIRMSEELFEHIEDQIDENGWDFDCQFAGNVLTIEAENGTQIIVNRHTPNQELWI AAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSEASGEAVEIAEL >gi|241320074|gb|ACQV01000019.1| GENE 54 52802 - 52972 278 56 aa, chain + ## HITS:1 COG:no KEGG:NMO_0186 NR:ns ## KEGG: NMO_0186 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 54 8 61 63 70 81.0 2e-11 MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLKFDTAKEPTTQTND >gi|241320074|gb|ACQV01000019.1| GENE 55 52989 - 54209 1768 406 aa, chain + ## HITS:1 COG:NMB1976 KEGG:ns NR:ns ## COG: NMB1976 COG0019 # Protein_GI_number: 15677805 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 406 1 406 414 743 91.0 0 MTLFCEQLPYTHLAEEFGTPLYVYSKSALTEAFENYQTAFAALNPLVCYAVKANGNLSII KYFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIP EIDRIRKVAARLGKVAPVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQ SHLKIVGIDCHIGSQLTDLSPLVEACERILALVDQLVAEGIVLEHLDLGGGVGIVYQDEN VPDLGAYAKEVQKLIGTRRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMN DLMRPALYDAYHHIEAVETKDIEPLTANIVGPICETGDFLGKDRTIACEEGDLLLIRSAG AYGSSMASNYNTRNRAAEVLVDGSECKLIRQRETIEQQMANELACL >gi|241320074|gb|ACQV01000019.1| GENE 56 54311 - 54538 277 75 aa, chain - ## HITS:1 COG:NMA0371 KEGG:ns NR:ns ## COG: NMA0371 COG2900 # Protein_GI_number: 15793379 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 75 1 74 74 82 68.0 2e-16 MSDIQELEHRITELEIQTALQEDLIGSLNNTIAKMQQALDLQQGQLRLLYQRMQDKGANG EREPYSLRDEIPPHY >gi|241320074|gb|ACQV01000019.1| GENE 57 54540 - 55913 1979 457 aa, chain - ## HITS:1 COG:NMB2064 KEGG:ns NR:ns ## COG: NMB2064 COG2056 # Protein_GI_number: 15677886 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis MC58 # 1 457 1 462 462 623 82.0 1e-178 MNAVVIAVIIMLVLSLSRVHVVLSLAVGAFVGGLVAGMPLENVTNTAGDVVQQGIIPVFN EGLKGGAQIALSYAMLGAFAMAITHSGLPQQLAGVIIRKLNGGEGNAKGEGAVKWLLLAI ILCMGVMSQNVVPIHIAFIPMIIPPLLLVFNRLKLDRRLVACVITFGLVTTYMFLPYGFG AIFLNDIMLGNIRSAGMDTSGINVMHAMAIPALGMVFGLLLAFLHYRKPRIYQNNTTDTE DNRAAAQQQEPSTYRSLVAAVAIAVCFAIQLLYDGSLVLGAMLGFAVFMMLGVMNRSAAS DVFGEGIKMMAMVGFIMIAAQGFAAVMNATGEIQPLVEHSMALFGGNKGMAALTMLCVGL LVTMGIGSSFSTLPIITAIYVPLCISLGFSPMATVAIVGTAGALGDAGSPASDSTLGPTM GLNADGQHDHIRDSVIPTFIHYNIPLMAAGWIAAMVL >gi|241320074|gb|ACQV01000019.1| GENE 58 56267 - 57586 1582 439 aa, chain + ## HITS:1 COG:BS_yceI KEGG:ns NR:ns ## COG: BS_yceI COG0477 # Protein_GI_number: 16077364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 18 435 11 400 400 322 45.0 1e-87 MDILTRLHNLPPSRFHYKLLVLVGIGWLFDAMDTGLVSFVLPALGKDWALAPAQLGWIVS IAFVGMALGAVFSGWLADRFGRKTVFAGTMVVYSIATGLCALAPDLAVLLVCRFFVGVGL GGQLPVAVSLVSEYAPPKVRGRFIVLLESFWGLGWLSAALVSYFFIPQTGWHSAFLFGAL PLFYVPLVLKFIPESVPYLLSRGKTNEAHRLVSALETQSGITPPTEAVAAPAAPRERIRF VQLWQHPFARRTLMLWLVWFGIVFSYYGIFTWLPKLLVEQGNTMVKTFEYVLVMIVAQLP GYIAAAALVERIGRKATLAGFLAACAVCAWFFGQSTTAAEVMIWGSLMSFFNLGAWGVLY TYTPELYPLRFRAFASGWAGAIGRVGGILAPMVVAAMVGNSGGFGNIFMMFALVMLLIVA VILVLGEETKGRTLEDISQ >gi|241320074|gb|ACQV01000019.1| GENE 59 57841 - 58443 237 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 3 192 224 401 477 95 33 5e-19 MATGGNAMVEAAYSCSKPALGVGAGNVPAYVEKTANIQQAAHDIVMSKAFDNGMICASEQ AVIADKEIYKELVEEFKSYGVYFANKKEKAMLEDFIFGVTANCANCGGAKLNAAVVGKPA AWIAEQAGFKVPEKTNIIIAECREVGPNEPLTREKLSPVLAMIKADSTEQGLQFAEEMVA FDGLGHSAAIHTADEELVKTF Prediction of potential genes in microbial genomes Time: Thu May 26 11:39:28 2011 Seq name: gi|241320046|gb|ACQV01000020.1| Neisseria flavescens SK114 ctg1118407793860, whole genome shotgun sequence Length of sequence - 13307 bp Number of predicted genes - 14, with homology - 12 Number of transcription units - 10, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 1368 2007 ## COG5295 Autotransporter adhesin + Term 1404 - 1439 5.1 2 1 Op 2 . + CDS 1447 - 3024 631 ## COG0457 FOG: TPR repeat 3 1 Op 3 . + CDS 3039 - 4970 341 ## MS2246 hypothetical protein + Term 4971 - 5009 0.2 - Term 5098 - 5158 9.2 4 2 Tu 1 . - CDS 5170 - 5292 110 ## COG3055 Uncharacterized protein conserved in bacteria - Prom 5334 - 5393 5.3 - Term 5367 - 5410 10.1 5 3 Tu 1 . - CDS 5433 - 6905 2312 ## COG0469 Pyruvate kinase - Prom 6943 - 7002 5.1 + Prom 6997 - 7056 4.4 6 4 Tu 1 . + CDS 7119 - 7622 621 ## NMCC_2050 integral membrane protein + Term 7637 - 7684 11.9 - Term 7623 - 7672 16.1 7 5 Op 1 . - CDS 7688 - 7813 147 ## 8 5 Op 2 . - CDS 7837 - 8700 1021 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 8864 - 8923 6.6 - Term 8910 - 8962 13.4 9 6 Tu 1 . - CDS 8976 - 9641 366 ## NMC0100 putative inner membrane protein - Prom 9795 - 9854 6.6 + Prom 9621 - 9680 6.0 10 7 Tu 1 . + CDS 9789 - 10442 415 ## COG3676 Transposase and inactivated derivatives - Term 10499 - 10546 -0.5 11 8 Tu 1 . - CDS 10580 - 11386 601 ## COG2801 Transposase and inactivated derivatives 12 9 Op 1 19/0.000 - CDS 11439 - 11897 509 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 13 9 Op 2 . - CDS 11908 - 12828 590 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 13044 - 13103 3.8 - Term 13089 - 13127 3.3 14 10 Tu 1 . - CDS 13169 - 13306 114 ## Predicted protein(s) >gi|241320046|gb|ACQV01000020.1| GENE 1 1 - 1368 2007 455 aa, chain + ## HITS:1 COG:NMB0992 KEGG:ns NR:ns ## COG: NMB0992 COG5295 # Protein_GI_number: 15676883 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Neisseria meningitidis MC58 # 263 455 417 591 591 63 33.0 7e-10 AYNLASQADTKADGAVAKAEAADAKAVAADTKAGKAAEAAQAADAKAVAADTKADGAVAK AEAADAKAVAADTKADGAVAKAEAADAKAVAADAKAVAADTKADGAVAKAEAADAKAVAA DTKAGKAATDAADALAKAGEAKDAAKAADDKAVAAADAAKAADDKAVAADTKADGAVAKA EAADAKAVAADAKADGAVAKAEAADAKAVAADTKAGKAATDAANALTTANGIDGKVSKAL QAVDKGWTLQTEPGTETTINAANNVVRFKAGDNIKISQTGGNITAALTNDINVTKVTAGT VVASNLTAKNATLGGAGHTVKVENGTNVDMGGNQIHNVGDGVKDSDAATVGQLNRALDQV AGSPAKINELNNRVDKMNKEMRGYAANAMAVTALPQVYTAGDSMISAAVGSQGGAASVAV GYSRASDNGKVVIKLNMAASSSGEKGVAAGVGYKW >gi|241320046|gb|ACQV01000020.1| GENE 2 1447 - 3024 631 525 aa, chain + ## HITS:1 COG:RSc3164 KEGG:ns NR:ns ## COG: RSc3164 COG0457 # Protein_GI_number: 17547883 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Ralstonia solanacearum # 241 495 117 364 387 95 28.0 2e-19 MENTQTSFETTEKMTALLLCDPTFLSNFDKNYIANLNKINWTPEMGEPHQLHGLPSNHFD IILVDETYSLNYSSFICCLRVLKNNGIIVMPKKCHLQFDKFKKRVAEFVEIFPSSDEIPI LILSKVVQNKSYEVYEQELSYFLETRAFDMALQWIDKMEILSPFAIEPIMYRCNIYQTLG LVEGVEASWASFQQRFNHQGIEIYKALSVITAGDYCKGFKMRQPLVSDARRTKTPPKAVH QIKKWQGQNLLGKHFVIWTEFGLGDELMFAQLAYALKKQLNVRKITLIAQTPVVKLLKSH LDIDVVIDSKKIDLELDDSFDYWSFPHDIMAYIDLPFYQIVKRHPYLFIDQQSIDNAKKK ISQMPDKLNIGIVWRGNPTHENDAFRSIHQPELLRLLFDIEGANWYCLQKECNLEEKKLL AEYQIPNLAKNAKTLWETATYLVNLDYLVTVDTSVAHLAGALGVKTLLLLPFIGDWRWGY GSGNNLWYPNITSIRIDSLTSSFEKVIHEVGIHLNVLIHNHLTRN >gi|241320046|gb|ACQV01000020.1| GENE 3 3039 - 4970 341 643 aa, chain + ## HITS:1 COG:no KEGG:MS2246 NR:ns ## KEGG: MS2246 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 7 634 2 628 631 932 68.0 0 MNKKATAEQAEVISPNIELLEQAVEQKDYERACSILLAILTELDDNFGLLGQIEFSYPEQ YQAETLDMDLVVYFCHRMANVITKLFTDQELTISDIGMQRFFSFQRWMAMIFASSSYINA DHILQVYNKNPVPGSLEVELESNRDSLVKFCIMYFPESNLNLNLDMLWNIAPDVCASLCF ALQSGRFIGTPAAFSKRAAILQWFPEKLATLSDLNSVPNSICHDVYMHCSYDVAPNKHDV KKALNTVIRRNHFLCGWKDLDVSQIGYRDGKPVMVVILEHFNMAHSIYRTHSTSMIAARE HFYLIGIGSERIDEQGRAVFDEFVLSPHDDHIYSRMGLVRDICEKNQAAILYMPSIGMDL LSIFLSNTRVAPIQAIALGHPATTYSDFIEYVVVEDDYVGSEDCFSETLLRLPKDALPYV PSAFAPTNVEYVLRENPAVINIGIAATTMKLNPYFLEILRIIRDKAAVKIHFHFMLGQSY GITHPYVARFIKSYLGDDATAHQQTPYQEYLGLIKDCDMMLNPLPFGNTNGIIDMVTMGL VGICKTGAEVHEHIDEGLFRRLGLPDWLIANTIDEYIERAIRLAENHEERLALRHQIIKN NGLNTLFSGNPRPMGEVFLKKLKAWAKKNGVKIKPKRKTKKPA >gi|241320046|gb|ACQV01000020.1| GENE 4 5170 - 5292 110 40 aa, chain - ## HITS:1 COG:HI0148 KEGG:ns NR:ns ## COG: HI0148 COG3055 # Protein_GI_number: 16272115 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 3 40 342 379 379 62 78.0 3e-10 MKFSVSYDNKVLLIGGETEGGKALTSVQTMSYDGKQLKVE >gi|241320046|gb|ACQV01000020.1| GENE 5 5433 - 6905 2312 490 aa, chain - ## HITS:1 COG:NMB0089 KEGG:ns NR:ns ## COG: NMB0089 COG0469 # Protein_GI_number: 15676021 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Neisseria meningitidis MC58 # 1 490 1 490 490 839 92.0 0 MSELQRDLTRISHNTKIVATLGPGSNNVQLLEDMIRVGGLNVIRFNFSHGTPEFHEENAL IVREAAKRAGQEVAILADLQGPKIRVGKIAGGSIELNKDETLILDAALEGEGTREAVGLD YRDLPNDVVAGDVLWLDDGLLTLTVEAVEGSRIITRVENSHVLKSNKGINKRGGGLSAGA LTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKVEEEMKGSTAVRPGLVSKIERVE AIENLDEIILASDGIMVARGDLAVEVGHAAVPALQKRMIRRARELRRFSITATQMMESMI TNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGAYPFETVSQMAVICAAAEKEQDSLNGV IEPVEFQDPLSTNLAIARGAVTVARAVHAKAIVALTESGSTAFEISRHNITLPIFALTPS ISAQRRMAMYRGVRPMILATSTDHDTALNEVEAVLIEHQILCSGDQYIITSGSKMRESGS TNTLEVLQVK >gi|241320046|gb|ACQV01000020.1| GENE 6 7119 - 7622 621 167 aa, chain + ## HITS:1 COG:no KEGG:NMCC_2050 NR:ns ## KEGG: NMCC_2050 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 155 24 178 195 175 58.0 4e-43 MKRFLTPLPIGIVLADLIYGFVLNVMQGLNLQQTASNQSGTISVTPDIAFNSLQIVANGG MVCIIGFGLIVLFQLNRAVLRQQILPIGIFRTLGLLAVLAFSISSLWEWLHAALSLLSGH NVLNFSNPRYLVTAACMPIIAFLCILRLYNWYRLHRTVATDDTSTTL >gi|241320046|gb|ACQV01000020.1| GENE 7 7688 - 7813 147 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKILTAAVLTLSLAACASGSGGSSQMYGEIKAGVETSHQR >gi|241320046|gb|ACQV01000020.1| GENE 8 7837 - 8700 1021 287 aa, chain - ## HITS:1 COG:NMA0169 KEGG:ns NR:ns ## COG: NMA0169 COG0454 # Protein_GI_number: 15793196 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 1 287 1 280 280 457 81.0 1e-129 MLVCNPYEVVIHGTTSKGKIFRPSDWAERLCGILSSFTKDNRLSYSNWVRPILVDNVRCV AVDKKLEEDNPQMFRFLMDFAADNDLRVIDCKALLKEQESKQQGEVPVERVLLAQAIEEK HAAERAEAANVQPEPQAAAPVVGVLREIQPEETATAFAALSVLRSSLTDIHRFVEQINEH QRKTGYRLLGIFEEGKQNAVAVCGFHTAHNLASGYHIHIDDLVTMPQCRQKGYASRLLEE VRKIGAETGATKIHLNVHVNHDRADAHRLYFKNGFEICAYHFRCDPK >gi|241320046|gb|ACQV01000020.1| GENE 9 8976 - 9641 366 221 aa, chain - ## HITS:1 COG:no KEGG:NMC0100 NR:ns ## KEGG: NMC0100 # Name: not_defined # Def: putative inner membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 216 3 218 221 244 56.0 1e-63 MHSSIQSRFAPILYVLIFFAGFLAAQVWFNQQAYLTNLPLLVTAISAVALVWLIWAVVSA RSKAKSKILHREQLIQKESIHPVLHATLQRSDGQTDLLVLIVRNSGKGLAKNVRFEVESL PDNLPSKLVADAVMRLEMFSGGVDMLASGELYGGVFASMLALAAELPDQTFGGVLKLKAT YENAFGDQCTSESILDLSILNFNLSEIKSSGEQKPRKKLLY >gi|241320046|gb|ACQV01000020.1| GENE 10 9789 - 10442 415 217 aa, chain + ## HITS:1 COG:NMB1411 KEGG:ns NR:ns ## COG: NMB1411 COG3676 # Protein_GI_number: 15677271 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 217 1 217 217 370 91.0 1e-102 MQITNCKLSKRVQKKLLEFFVLQVTSRSAADILGIQPNSAILFYRKIRMVISHYLALVAD EVFEGPVELDESYFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK KKTMPDSIVYTDSLSSYDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY NGIDRKSFPLFLKECEFRFNFGTPSQQLKILRDWCGI >gi|241320046|gb|ACQV01000020.1| GENE 11 10580 - 11386 601 268 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 95 31.0 8e-20 MNMHKNTRLTPHHRQAIWLAYTQGKESVTSLARHYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLCTERLPLLKGQKATGKR VYLFVAIDDFSRELYAAILPDKTADSAAKFLTGHLVDPCPYLIECVYSDNGTEYKGSANH AFGVACYENGIGQKFTRVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|241320046|gb|ACQV01000020.1| GENE 12 11439 - 11897 509 152 aa, chain - ## HITS:1 COG:NMA0167 KEGG:ns NR:ns ## COG: NMA0167 COG1781 # Protein_GI_number: 15793194 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Neisseria meningitidis Z2491 # 1 152 1 152 152 273 84.0 1e-73 MENSKLSVEAIEQGTVIDHIPAGKGLAILRQFKLLHYGSAVTVGFNLPSKTQGSKDIIKV SGVWLDANAANRLALFAPEAVVNKIDQFKVIDKQHLSLPDEISEVFRCPNTNCASHGEPV ISRFYVRSHNGQTRLKCHYCEKTFSRDSVAEA >gi|241320046|gb|ACQV01000020.1| GENE 13 11908 - 12828 590 306 aa, chain - ## HITS:1 COG:NMA0168 KEGG:ns NR:ns ## COG: NMA0168 COG0540 # Protein_GI_number: 15793195 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Neisseria meningitidis Z2491 # 1 306 1 306 306 582 93.0 1e-166 MPNPLYRQHIISISDLTTEQLELLLQTALKLKKQPREDLLEGKLIGSCFFEPSTRTRLSF ETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISSYTDAIIQRHPKDGAARVAAEFSS VPVINAGDGTNQHPSQTLLDLVTIYETQGSLSNLKIAMAGDLKYGRTVHSLCQALKRWGC EFAFVSPPSLAMPDYITEELEEAGCPYQVLSSLEEAVEWADILYMTRVQRERFDEQEFAK IQGKFNLDASMLANAKPNLRVLHPLPRVDEIHPDVDKTPHAYYFEQATNGVYARMAILSL VLNEEV >gi|241320046|gb|ACQV01000020.1| GENE 14 13169 - 13306 114 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no KNGAFKSVEELKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK Prediction of potential genes in microbial genomes Time: Thu May 26 11:41:52 2011 Seq name: gi|241319972|gb|ACQV01000021.1| Neisseria flavescens SK114 ctg1118407793863, whole genome shotgun sequence Length of sequence - 53693 bp Number of predicted genes - 65, with homology - 64 Number of transcription units - 22, operones - 12 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 30/0.000 + CDS 1 - 222 289 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 2 1 Op 2 30/0.000 + CDS 182 - 697 650 ## COG0480 Translation elongation factors (GTPases) + Term 706 - 753 7.1 + Prom 702 - 761 3.2 3 2 Op 1 16/0.000 + CDS 783 - 1967 1589 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 4 2 Op 2 40/0.000 + CDS 1985 - 2296 517 ## PROTEIN SUPPORTED gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 + Term 2300 - 2351 10.4 + Prom 2405 - 2464 5.0 5 3 Op 1 58/0.000 + CDS 2547 - 3191 1071 ## PROTEIN SUPPORTED gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 6 3 Op 2 61/0.000 + CDS 3191 - 3811 1016 ## PROTEIN SUPPORTED gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 7 3 Op 3 61/0.000 + CDS 3808 - 4122 500 ## PROTEIN SUPPORTED gi|241759637|ref|ZP_04757738.1| ribosomal protein L23 8 3 Op 4 60/0.000 + CDS 4128 - 4961 1451 ## PROTEIN SUPPORTED gi|225373859|ref|ZP_03751080.1| hypothetical protein NEISUBOT_02153 9 3 Op 5 59/0.000 + CDS 4967 - 5245 477 ## PROTEIN SUPPORTED gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 10 3 Op 6 61/0.000 + CDS 5254 - 5583 536 ## PROTEIN SUPPORTED gi|241759608|ref|ZP_04757709.1| ribosomal protein L22 11 3 Op 7 50/0.000 + CDS 5593 - 6285 1170 ## PROTEIN SUPPORTED gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 12 3 Op 8 50/0.000 + CDS 6236 - 6685 708 ## PROTEIN SUPPORTED gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 13 3 Op 9 50/0.000 + CDS 6685 - 6876 303 ## PROTEIN SUPPORTED gi|225076403|ref|ZP_03719602.1| hypothetical protein NEIFLAOT_01448 14 3 Op 10 50/0.000 + CDS 6876 - 7139 435 ## PROTEIN SUPPORTED gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 + Term 7179 - 7218 1.1 + Prom 7288 - 7347 4.5 15 3 Op 11 57/0.000 + CDS 7367 - 7735 604 ## PROTEIN SUPPORTED gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 16 3 Op 12 48/0.000 + CDS 7747 - 8070 536 ## PROTEIN SUPPORTED gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 17 3 Op 13 50/0.000 + CDS 8080 - 8619 905 ## PROTEIN SUPPORTED gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 18 3 Op 14 50/0.000 + CDS 8622 - 8927 504 ## PROTEIN SUPPORTED gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 19 3 Op 15 55/0.000 + CDS 8942 - 9334 640 ## PROTEIN SUPPORTED gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 20 3 Op 16 46/0.000 + CDS 9348 - 9881 883 ## PROTEIN SUPPORTED gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 21 3 Op 17 56/0.000 + CDS 9895 - 10248 569 ## PROTEIN SUPPORTED gi|225121149|ref|ZP_03721549.1| hypothetical protein NEILACOT_00835 22 3 Op 18 50/0.000 + CDS 10266 - 10784 874 ## PROTEIN SUPPORTED gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 23 3 Op 19 48/0.000 + CDS 10777 - 10962 303 ## PROTEIN SUPPORTED gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 24 3 Op 20 53/0.000 + CDS 10964 - 11398 707 ## PROTEIN SUPPORTED gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 25 3 Op 21 3/0.000 + CDS 11412 - 12725 1089 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 26 3 Op 22 . + CDS 12730 - 12948 237 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 27 3 Op 23 . + CDS 12967 - 13080 195 ## PROTEIN SUPPORTED gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 28 3 Op 24 48/0.000 + CDS 13148 - 13510 613 ## PROTEIN SUPPORTED gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 29 3 Op 25 36/0.000 + CDS 13530 - 13925 666 ## PROTEIN SUPPORTED gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 30 3 Op 26 26/0.000 + CDS 13945 - 14565 1033 ## PROTEIN SUPPORTED gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 31 3 Op 27 50/0.000 + CDS 14591 - 15577 956 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 32 3 Op 28 . + CDS 15602 - 15976 623 ## PROTEIN SUPPORTED gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 + Term 15989 - 16030 8.1 33 4 Tu 1 . - CDS 16668 - 16919 81 ## gi|269213792|ref|ZP_05982863.2| conserved hypothetical protein 34 5 Tu 1 . - CDS 17934 - 18116 259 ## - Prom 18159 - 18218 1.8 - Term 18623 - 18675 10.6 35 6 Op 1 4/0.000 - CDS 18696 - 19022 205 ## COG3512 Uncharacterized protein conserved in bacteria 36 6 Op 2 5/0.000 - CDS 19015 - 19929 566 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Term 19946 - 19986 8.2 37 6 Op 3 . - CDS 19996 - 23241 2780 ## COG3513 Uncharacterized protein conserved in bacteria - Prom 23269 - 23328 5.3 - Term 23468 - 23503 7.4 38 7 Tu 1 . - CDS 23511 - 24935 744 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 25044 - 25103 5.4 - Term 25131 - 25178 14.2 39 8 Op 1 . - CDS 25198 - 26709 2678 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 26775 - 26834 3.1 - Term 26804 - 26864 19.1 40 8 Op 2 . - CDS 26889 - 28331 2126 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 28362 - 28421 2.8 - TRNA 28631 - 28706 91.3 # Lys TTT 0 0 + Prom 28710 - 28769 6.8 41 9 Tu 1 . + CDS 28889 - 29287 825 ## gi|261380590|ref|ZP_05985163.1| outer membrane protein + Term 29293 - 29361 17.2 - Term 29297 - 29334 9.1 42 10 Op 1 2/0.000 - CDS 29351 - 30325 1477 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 43 10 Op 2 . - CDS 30360 - 30809 565 ## COG3399 Uncharacterized protein conserved in bacteria - Prom 30962 - 31021 7.9 + Prom 30857 - 30916 6.0 44 11 Tu 1 . + CDS 31065 - 31277 430 ## gi|225076349|ref|ZP_03719548.1| hypothetical protein NEIFLAOT_01393 + Term 31304 - 31340 2.2 - Term 31284 - 31337 8.2 45 12 Op 1 2/0.000 - CDS 31342 - 32262 1348 ## COG0583 Transcriptional regulator 46 12 Op 2 22/0.000 - CDS 32266 - 32529 473 ## COG0851 Septum formation topological specificity factor 47 12 Op 3 22/0.000 - CDS 32533 - 33348 1365 ## COG2894 Septum formation inhibitor-activating ATPase 48 12 Op 4 . - CDS 33375 - 34100 1140 ## COG0850 Septum formation inhibitor - Prom 34121 - 34180 4.7 49 13 Tu 1 . - CDS 34242 - 35477 1195 ## COG0415 Deoxyribodipyrimidine photolyase - Prom 35501 - 35560 5.1 50 14 Tu 1 . + CDS 35604 - 36461 1092 ## APP7_1882 hypothetical protein + Term 36483 - 36536 19.3 51 15 Op 1 4/0.000 + CDS 36832 - 38223 1166 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 + Term 38231 - 38275 5.5 52 15 Op 2 2/0.000 + CDS 38307 - 39557 1651 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 39599 - 39649 13.7 + Prom 39616 - 39675 7.3 53 16 Op 1 2/0.000 + CDS 39758 - 40552 831 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 40557 - 40613 10.3 + Prom 40556 - 40615 5.0 54 16 Op 2 . + CDS 40649 - 43645 4223 ## COG0525 Valyl-tRNA synthetase + Prom 43694 - 43753 6.3 55 17 Tu 1 . + CDS 43774 - 44553 263 ## gi|241759620|ref|ZP_04757721.1| hypothetical protein NEIFL0001_0397 + Term 44639 - 44683 2.6 - Term 44806 - 44835 2.1 56 18 Op 1 2/0.000 - CDS 44891 - 45832 1588 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 57 18 Op 2 . - CDS 45848 - 46738 792 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 46765 - 46824 6.0 + Prom 46778 - 46837 4.8 58 19 Op 1 2/0.000 + CDS 46859 - 47443 909 ## COG0288 Carbonic anhydrase 59 19 Op 2 14/0.000 + CDS 47462 - 48067 857 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 60 19 Op 3 . + CDS 48126 - 48512 686 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 48532 - 48585 16.2 + Prom 48535 - 48594 4.8 61 20 Tu 1 . + CDS 48621 - 50015 1756 ## COG1643 HrpA-like helicases + Term 50252 - 50289 0.2 + Prom 50223 - 50282 3.8 62 21 Op 1 . + CDS 50489 - 50707 253 ## gi|241759659|ref|ZP_04757760.1| conserved hypothetical protein 63 21 Op 2 . + CDS 50762 - 51049 296 ## Pecwa_1396 transcriptional regulator, XRE family 64 21 Op 3 . + CDS 51042 - 51998 250 ## COG3344 Retron-type reverse transcriptase 65 22 Tu 1 . + CDS 52115 - 53482 1149 ## COG1643 HrpA-like helicases Predicted protein(s) >gi|241319972|gb|ACQV01000021.1| GENE 1 1 - 222 289 73 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 67 328 394 407 115 79 4e-25 EEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGLR FAIREGGVGTERV >gi|241319972|gb|ACQV01000021.1| GENE 2 182 - 697 650 171 aa, chain + ## HITS:1 COG:NMB0138 KEGG:ns NR:ns ## COG: NMB0138 COG0480 # Protein_GI_number: 15676066 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Neisseria meningitidis MC58 # 14 171 544 701 701 298 95.0 2e-81 MRFAKVVLEPKGFEFIPSVDKGIRDTLPNGIVAGYPVVDVRVRLIFGSSHDVDSSQLAFE LAASQAFKEGMRKANPALLEPIMAVEVETPEEYMGDVMGDLNRRRGVVLGMDDDGIGGKK VRAEVPLAEMFGYSTDLRSATQGRATYSMEFKKYAEAPAHVAAAVTEARKG >gi|241319972|gb|ACQV01000021.1| GENE 3 783 - 1967 1589 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 616 74 1e-176 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTIT VELIAPIAMEEGLRFAIREGGRTVGAGVVSSIIA >gi|241319972|gb|ACQV01000021.1| GENE 4 1985 - 2296 517 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225024696|ref|ZP_03713888.1| hypothetical protein EIKCOROL_01578 [Eikenella corrodens ATCC 23834] # 1 103 1 103 103 203 100 1e-51 MANQKIRIRLKAYDYSLIDRSAQEIVETAKRTGAVVKGPIPLPTKIERFNILRSPHVNKT SREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKVQ >gi|241319972|gb|ACQV01000021.1| GENE 5 2547 - 3191 1071 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114] # 1 214 1 214 214 417 100 1e-116 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV VRVDAERQLLLVKGAVPGSVNSDVVVRPSVKVGA >gi|241319972|gb|ACQV01000021.1| GENE 6 3191 - 3811 1016 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676070|ref|NP_273201.1| 50S ribosomal protein L4 [Neisseria meningitidis MC58] # 1 206 1 206 206 395 97 1e-109 MELKVIDAKGQVSGSLAVSDALFAREYNEALVHQLVTAYLANARSGNRAQKTRAEVNHST KKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVNRKMYRAGMATILSQLARD ERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDENVYLASRNLPNVLVLEAQQV DPYSLLRYKKVVITKDAVAQLEEQWV >gi|241319972|gb|ACQV01000021.1| GENE 7 3808 - 4122 500 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759637|ref|ZP_04757738.1| ribosomal protein L23 [Neisseria flavescens SK114] # 1 104 1 104 104 197 100 1e-49 MNQQRLTQVILAPIVSEKSNVLAEKCNQMTFKVLANATKPEIKAAVELLFGVQVADVTTV TIKGKVKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAADKE >gi|241319972|gb|ACQV01000021.1| GENE 8 4128 - 4961 1451 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225373859|ref|ZP_03751080.1| hypothetical protein NEISUBOT_02153 [Neisseria subflava NJ9703] # 1 277 1 277 277 563 100 1e-160 MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRNNNGHITTRHKGGGHKH HYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERRYIIAPRGIQAGAVLVSGA EAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLAKEGAYAQVRLRSGE VRKISVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRPTVRGVVMNPVDHPHGGGEGRTG EAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNKG >gi|241319972|gb|ACQV01000021.1| GENE 9 4967 - 5245 477 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676073|ref|NP_273204.1| 30S ribosomal protein S19 [Neisseria meningitidis MC58] # 1 92 1 92 92 188 100 6e-47 MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDFIGLTIAVHNGRTHVPV FISDNMVGHKLGEFSLTRTFKGHLADKKAKKK >gi|241319972|gb|ACQV01000021.1| GENE 10 5254 - 5583 536 109 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759608|ref|ZP_04757709.1| ribosomal protein L22 [Neisseria flavescens SK114] # 1 109 1 109 109 211 100 9e-54 MRVSAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGAELIKKVLESAIANAEH NNGADIDELKVVTIFVDKGSSLKRFQARAKGRGNRIEKQTCHINVTVGN >gi|241319972|gb|ACQV01000021.1| GENE 11 5593 - 6285 1170 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens NRL30031/H210] # 1 230 1 230 230 455 100 1e-127 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRKKLANASVGRVVIERP AKSARITIHSARPGVVIGKKGEDIEILKRDLQALMGVPVHVNIEEIRRPELDAQIIADGI AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHEKKQRKAGGRNAAAN >gi|241319972|gb|ACQV01000021.1| GENE 12 6236 - 6685 708 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076402|ref|ZP_03719601.1| hypothetical protein NEIFLAOT_01447 [Neisseria flavescens NRL30031/H210] # 12 149 1 138 138 277 100 1e-73 MRRNKERQVDVMLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTARQIEA ARRTMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEVKPGKVLYEMDGV PESLAREAFELAAAKLPIPTTFVVRQVGQ >gi|241319972|gb|ACQV01000021.1| GENE 13 6685 - 6876 303 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076403|ref|ZP_03719602.1| hypothetical protein NEIFLAOT_01448 [Neisseria flavescens NRL30031/H210] # 1 63 1 63 63 121 100 1e-26 MKANELKDKSIEQLNSDLLDLLKAQFGLRMQNATGQLGKSSELKRVRRDIARIKTILTEK GAK >gi|241319972|gb|ACQV01000021.1| GENE 14 6876 - 7139 435 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076404|ref|ZP_03719603.1| hypothetical protein NEIFLAOT_01449 [Neisseria flavescens NRL30031/H210] # 1 87 1 87 87 172 100 5e-42 MSEAKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLSTKIHAHDENNQYGIGDV VVIEESRPLSKTKSWVVKELVEKARTV >gi|241319972|gb|ACQV01000021.1| GENE 15 7367 - 7735 604 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676079|ref|NP_273210.1| 50S ribosomal protein L14 [Neisseria meningitidis MC58] # 1 122 1 122 122 237 100 1e-61 MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVKDAAPRGRVKKGDVYNA VVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPVTRELRTERFMKIVSLAPE VL >gi|241319972|gb|ACQV01000021.1| GENE 16 7747 - 8070 536 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076406|ref|ZP_03719605.1| hypothetical protein NEIFLAOT_01451 [Neisseria flavescens NRL30031/H210] # 1 107 1 107 107 211 100 9e-54 MNKIIKGDQVVVITGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQKPNPMRGIEGGIITKE MPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNGSIIGA >gi|241319972|gb|ACQV01000021.1| GENE 17 8080 - 8619 905 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076407|ref|ZP_03719606.1| hypothetical protein NEIFLAOT_01452 [Neisseria flavescens NRL30031/H210] # 1 179 1 179 179 353 100 1e-96 MARLREFYKDTVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAVADKKVMEHAVSDLEKI AGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDRLITIALPRVRDFRGVSGK SFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTAKTDEEAKALLSLFKFPFKG >gi|241319972|gb|ACQV01000021.1| GENE 18 8622 - 8927 504 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076408|ref|ZP_03719607.1| hypothetical protein NEIFLAOT_01453 [Neisseria flavescens NRL30031/H210] # 1 101 1 101 101 198 100 5e-50 MAKKALINRELKRQALAKKFAAKREAIFAVINDANATEEERFEARLKFQSIPRNAAPVRQ RRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW >gi|241319972|gb|ACQV01000021.1| GENE 19 8942 - 9334 640 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076409|ref|ZP_03719608.1| hypothetical protein NEIFLAOT_01454 [Neisseria flavescens NRL30031/H210] # 1 130 1 130 130 251 100 8e-66 MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEGYIEDFAVSADAKPVLE IQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGVAIVSTSKGVMTDRKARSEG VGGELLCIVA >gi|241319972|gb|ACQV01000021.1| GENE 20 9348 - 9881 883 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759663|ref|ZP_04757764.1| ribosomal protein L6 [Neisseria flavescens SK114] # 1 177 1 177 177 344 100 5e-94 MSRVAKNPVTVPAGVEVKFGTDTLVIKGKNGELSFPLHSDVAIELNDGKLTFAAKNDSKQ ANAMSGTARALVNNMVKGVSEGFEKKLQLIGVGYRAQAQGKVLNLSLGFSHPIVYEMPEG VSVQTPSQTEIVLTGADKQVVGQVAAEIRAFRSPEPYKGKGVRYVGEVVVMKEAKKK >gi|241319972|gb|ACQV01000021.1| GENE 21 9895 - 10248 569 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225121149|ref|ZP_03721549.1| hypothetical protein NEILACOT_00835 [Neisseria lactamica ATCC 23970] # 1 117 1 117 117 223 100 1e-57 MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRS SLKSGSNVEAAAVVGKRIAEKAKAAGVEKVAFDRSGFQYHGRVKALAEAARENGLSF >gi|241319972|gb|ACQV01000021.1| GENE 22 10266 - 10784 874 172 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076412|ref|ZP_03719611.1| hypothetical protein NEIFLAOT_01457 [Neisseria flavescens NRL30031/H210] # 1 172 1 172 172 341 100 6e-93 MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDGDGRIGMGKGKSKEVPV AVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAKEGSGVKAGGPMRLVFDAM GIHNISAKVHGSTNPYNIVRATLDGLSKLYTPADIAAKRGLTVEDILGANHD >gi|241319972|gb|ACQV01000021.1| GENE 23 10777 - 10962 303 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076413|ref|ZP_03719612.1| hypothetical protein NEIFLAOT_01458 [Neisseria flavescens NRL30031/H210] # 1 61 1 61 61 121 100 1e-26 MTEQKKIKVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTPENRGMINKISYLLKVE S >gi|241319972|gb|ACQV01000021.1| GENE 24 10964 - 11398 707 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759618|ref|ZP_04757719.1| ribosomal protein L15 [Neisseria flavescens SK114] # 1 144 1 144 144 276 100 1e-73 MFLNTIQPAEGATRASRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR LPKRGFKSLTAAANAEVRLSELNLIAVNEIDVLVLKQAGLIPATVSNVKVIASGEISKAV TLKGVKATKGAKAAIEAAGGKVEE >gi|241319972|gb|ACQV01000021.1| GENE 25 11412 - 12725 1089 437 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 1 432 8 443 447 424 49 1e-118 MANQQSLSGLSKFGDLKKRLAFLLGALVVFRIGAHIPVPGVDAVALAKLYEGAANGIFGM LNMFSGGSLERFSIFAIGIMPYISASIIVQLASEIVPSLKALKKEGEAGRKIITKYTRYG TVLLAVLQSFGVATFVYQQGVVVTSSLEFHISTVVCLVTGTMFLMWLGEQITERGIGNGI SLIITAGIVSGIPSGIVRLLTLTEQGSMSMLMAVSIVIGILLLIYAVVYFESAQRKVPVH YAKRQFGSGMMPGQSIHMPFKLNMAGVIPPIFASSIILFPSTLLGWFGSNSTNSVLHKVA AMLQHGQPLYIVLFATTIIFFCYFYTALVFSPKEMAENLKKSGAFVPGIRPGEQTSRYLE KVVLRLTLFGALYITTICLIPEFLTTALKVPFYLGGTSLLILVVVTMDFRTQINSYRMSS QYEDLMSRPDMKSLSRK >gi|241319972|gb|ACQV01000021.1| GENE 26 12730 - 12948 237 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 70 1 71 73 95 63 4e-19 MAKEDTIQMQGEILETLPNATFKVKLENDHVVLGHISGKMRMHYIRISPGDKVTVELTPY DLTRARIVFRAR >gi|241319972|gb|ACQV01000021.1| GENE 27 12967 - 13080 195 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34499619|ref|NP_903834.1| 50S ribosomal protein L36 [Chromobacterium violaceum ATCC 12472] # 1 37 1 37 37 79 97 3e-14 MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG >gi|241319972|gb|ACQV01000021.1| GENE 28 13148 - 13510 613 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] # 1 120 1 120 120 240 100 1e-62 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPSTKAKDLDEAQLDALREQV AKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGKK >gi|241319972|gb|ACQV01000021.1| GENE 29 13530 - 13925 666 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676093|ref|NP_273224.1| 30S ribosomal protein S11 [Neisseria meningitidis MC58] # 1 131 1 131 131 261 100 8e-69 MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKS TPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRALNALGFKITSITDVTPLPH NGCRPPKKRRI >gi|241319972|gb|ACQV01000021.1| GENE 30 13945 - 14565 1033 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759655|ref|ZP_04757756.1| ribosomal protein S4 [Neisseria flavescens SK114] # 1 206 1 206 206 402 100 1e-111 MARYIGPKCKLARREGTDLFLKSARRSLDSKCKMDSAPGQHGAKKPRLSDYGLQLREKQK IRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVVYRMGFGSTRAEARQLVSH KAIIVNGQVVNIPSFQVKAGDVVAVREKAKKQVRIQEALSLATQIGLPSWVSVDADKLEG VFKNMPDRSELSGDINEQLVVEFYSK >gi|241319972|gb|ACQV01000021.1| GENE 31 14591 - 15577 956 328 aa, chain + ## HITS:1 COG:NMA0103 KEGG:ns NR:ns ## COG: NMA0103 COG0202 # Protein_GI_number: 15793131 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 328 1 328 328 597 92.0 1e-170 MQNSTTEFLKPRQIDVDTLSSTRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVV ISGVLHEYSTIDGVQEDVVDVLLNIKGIVFKLHGRNQVQLTLKKTGAGAVVAGDIDLPHD VEIINPEHVICHLADNGQIDMEIKVEQGRGYQSVSGRRVLRDENKQIGAIQLDASFSPIS RVSFEVEPARVEQRTDLDKLVLDIETNGSIDPEEAVRSAARILIDQMSIFADLQGTPVEE VEEKAPPIDPILLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN EIKEVLASKGLTLGSKLEAWPPVGLEKP >gi|241319972|gb|ACQV01000021.1| GENE 32 15602 - 15976 623 124 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241759652|ref|ZP_04757753.1| ribosomal protein L17 [Neisseria flavescens SK114] # 1 124 1 124 124 244 100 8e-64 MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKELRRVVEPLITLGKKPSL ANRRLAFDRTRDRDVVVKLFDELGPRFAARNGGYVRVLKYGFRKGDNAPLALVELVDKAA DSAE >gi|241319972|gb|ACQV01000021.1| GENE 33 16668 - 16919 81 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|269213792|ref|ZP_05982863.2| ## NR: gi|269213792|ref|ZP_05982863.2| conserved hypothetical protein [Neisseria cinerea ATCC 14685] # 2 79 18 95 184 80 61.0 4e-14 MIVALRNEKGSYNVDTKGWQLFGIVALRNEKGSYNRNGQTKPSPPIVALRNEKGSYNSAH LPLSFPQIVALRNEKGSYNLVDR >gi|241319972|gb|ACQV01000021.1| GENE 34 17934 - 18116 259 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEALIVALRNEKGSYNQALIYQRQQEIVALRNEKGSYNFKRINACPVYIVALRNEKGSYN >gi|241319972|gb|ACQV01000021.1| GENE 35 18696 - 19022 205 108 aa, chain - ## HITS:1 COG:NMA0629 KEGG:ns NR:ns ## COG: NMA0629 COG3512 # Protein_GI_number: 15793616 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 108 1 108 108 186 95.0 1e-47 MSEAKFMRIIVFFDLPVTTAAKRKAANQFRQFLLKDGYQMLQLSVYSRIVKGRDSLQKHH NRLCANLPQEGSIRSLEVTEKQYATMKLLLGELKTQEKRVNSDQLLLF >gi|241319972|gb|ACQV01000021.1| GENE 36 19015 - 19929 566 304 aa, chain - ## HITS:1 COG:NMA0630 KEGG:ns NR:ns ## COG: NMA0630 COG1518 # Protein_GI_number: 15793617 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 304 1 304 304 532 94.0 1e-151 MTWRSLLIQNGGKLSLQCRRLLIQQNGESHTVPLEDIAVIIIENRETLITAPLLSALAEH GSTLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKKQLWQHIIRQKILNQAFVA DETGNDLAAKRLRTLAVEVRSGDTGNREAQAAALYFQALFGEKFTRNDNNAVNAALNYTY AVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFIEPLRPLADLVVIHLHEQGRLKT DLTPNIKQNLIKTLHCQICIERQYFSTLAAIDKMISSFQASVTDKNAKQLKLPEILPLKE YQYE >gi|241319972|gb|ACQV01000021.1| GENE 37 19996 - 23241 2780 1081 aa, chain - ## HITS:1 COG:NMA0631 KEGG:ns NR:ns ## COG: NMA0631 COG3513 # Protein_GI_number: 15793618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 1081 1 1082 1082 1686 83.0 0 MTAFKPNPINYILGLDIGIASVGWAMVEIDEEENPIRLIDLGVRVFERAEVPKTGDSLAA ARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGLIKSLPNTPWQLRAAALDR KLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLKGVADNAHALQTGDFRTPAEL AVNKFEKESGHIRNQRGDYSHTFSRKDLQAELVLLFEKQKEFGNPHISDGLKEGIETLLM AQRPALSGDAVQKMLGYCTFEPTEPKAAKNTYTAERFIWLTKLNNLRILEQGSERPLTDT ERATLIDMPYKNKLTYAKARELLGLDDTAFFKGLRYGKDNAESATLMEMKAYHAIRRALE KEGLKDKKSPLSLSPELQDEIGTAFSLFKTDEDITGRLKGCLQPEILDALLKHINFDKFV QISLKALRRIVPLMEQGKRYDEACAETYGDHYGEKNSEEMLYLPPIPADEIRNPVVLRAL SQARKVINGVVRRYGSPARIHIETAREVGKSFKDRKEIEKRQEENRKDREKAAAKFREYF PNFVGEPKSKDILKLRLYEQQHGKCLYSGKAIDIRRLNGKGYVEIDHALPFSRTWDDSFN NKVLVLGSENQNKGNRTPYEYLNGKDNSREWLEFKARVETSRFPHSKKQRVLLQKFDEKG FKERNLNDTRYVNRFLCQFVADHMQLTGKGKRRVFASNGQITNLLRGFWGLHKVRAENDR HHALDAVVVACSTVAMQQKITCFVRYKEMNAFDGKTVDKETGEVLHQKTHFPQPWEFFAQ EVMIRVFGKPDGKPEFEEADTPEKLRALLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGA HKDTLRSAKRFVKHNEKISVKRVWLTEIKLADLENMVNYKNGREIELYEALKARLGAYGG NAKQAFDPKDNPFYKKGGQLVKAVRVEKTQESGVLLNKKNAYTIADNGDMVRVDVFCKVD KKGKNQYFIVPIYAWQVAENILPDIDCKGYRIDDSYTFCFSLHKYDLIAFQKDEKSKVEF AYYINCDSSNGRFYLAWHDKGSKEQQFRISTQNLVLMQKYQIDELGKEIRPCRLKKRPPV R >gi|241319972|gb|ACQV01000021.1| GENE 38 23511 - 24935 744 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 12 451 7 446 456 291 37 7e-78 MDQFFEQLHGWVNAINDPMWSGLVYMLLGAGLFFTVTTGFVQFRLFGRSIKEMLGGRKQG DDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKLGGPGAVFWMWVTALIGMSSAFVESSL AQLFKIRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSLIFCFGFVFEAVQTNTIADTTK AAWGWDQHYVGVALVILTAPIIFGGIRRVSKAAEIIVPLMAVLYLVIALFIIVTNISLIP EVFGQIFSNAFNFDSAAGGFLGGLISTTMMQGIKRGLYSNEAGMGSAPNAAAAAEVKHPV SQGMIQMLGVFVDTIIVCSCTAFIILTYQQPYGDLSGAALTQAAIVSQVGEWGAGFLAVI LFMFAFSTVIGNYAYAESNVQFIKSHWLVTAVFRMLVLAWVYFGAVANVPLVWDMADMAM GIMAWINLVAILLLSPLAFLLLKDYTAKLKVGKDPEFKLSEHPGLKRKIKSDIW >gi|241319972|gb|ACQV01000021.1| GENE 39 25198 - 26709 2678 503 aa, chain - ## HITS:1 COG:NMB1425 KEGG:ns NR:ns ## COG: NMB1425 COG1190 # Protein_GI_number: 15677284 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Neisseria meningitidis MC58 # 1 503 1 503 503 980 95.0 0 MSEQNNPQIEPQLDENQIIALRREKLHNIRKERNAYPNDFKRDSFAADLHARYGDIGKEE LDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFNHWDLGDI VGTEGTLFKTNHGELTVRVSNIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESR NTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPE LYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNA SRAVNGTAKISYNGKEVDLESPFERLTILGAIKKYNPHYTDEQLNDEEWLKKEIVKHGES LPPSPGIGSLQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDSKPGLTERFELFVVGR ELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDR LVMLLTDSQTIRDVILFPQMRPE >gi|241319972|gb|ACQV01000021.1| GENE 40 26889 - 28331 2126 480 aa, chain - ## HITS:1 COG:NMB1968 KEGG:ns NR:ns ## COG: NMB1968 COG1012 # Protein_GI_number: 15677798 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 480 1 480 480 899 95.0 0 MKQLSMYINGRFETDFNGTWRDVLNPATEEVIAREPKGGKADVDRAVAAARDAQTAWERL PAVERGAYLRKIAQGIRERADDLTDTIVAEGGKTKDLARVEVMFTADYLDYQAEWARRYE GEIIQSDRPRENILLFKRPLGVVAGILPWNFPFFLIARKMGPALVTGNTIVVKPSSVTPI NCHIFAEIVHASGLPAGVFNVVNGPGAEIGNALASHPQVDMVSLTGSVDAGRQVMEAAAT NITKVSLELGGKAPAIILKDADLDLAVKSILASRVGNTGQICNCAERVYVHSSLKDAFIE KMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVKSVAEKVERAVKQGATLVCGGKRAEGR GYFFEPTLLTDTDNSMDIMKEETFGPVLPVATFDTLDQVIALANDSEFGLTSSVYTTNLN EAFYVTRRLRFGETYINRENFEAMQGFHAGWKKSGIGGADGKHGLEEYLQTQVVYLETDI >gi|241319972|gb|ACQV01000021.1| GENE 41 28889 - 29287 825 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261380590|ref|ZP_05985163.1| ## NR: gi|261380590|ref|ZP_05985163.1| outer membrane protein [Neisseria subflava NJ9703] # 1 132 1 132 132 84 97.0 2e-15 MKKLLIAAMMVAGLAACTQEAKKETQEAASAVASDVNAAAENAASAVDAAASEAKGAAEQ AVSDVKDAAADAKATADKAVSDAKDAAGKAVEEAKDAVSDAKDAAKDAAKDAMGKAADAT QEAADKLKDAAK >gi|241319972|gb|ACQV01000021.1| GENE 42 29351 - 30325 1477 324 aa, chain - ## HITS:1 COG:NMB0012 KEGG:ns NR:ns ## COG: NMB0012 COG0861 # Protein_GI_number: 15675960 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Neisseria meningitidis MC58 # 1 320 1 320 323 492 82.0 1e-139 MTQYPSVGSPMFYGIFFIAVLIMIAIDMVSLKKNGAHKVSIKEALAWSGIWVAVSCAFAG WLYFELAGNPTYGAVVAKEKVLEFFTGYVLEKSLAVDNIFVFLMIFGYFKVEPKFQHRVL LYGVFGAIVLRAIMIFIGAALVQQFEWILYLFGAFLLYTGIHMMKPEAEAEEDLSQNKIL TLLKKVIPTSQQFDGEKFFTLENGKRIATPLLLVLIMIELSDVIFAVDSIPAIFAVTTDP FIVLTSNIFAILGLRAMYFLLADFAERFIFLKYGLAFVLSFIGIKMLIMHWVHIPISISL SVVFGALSASILTSLVYTRQQEKK >gi|241319972|gb|ACQV01000021.1| GENE 43 30360 - 30809 565 149 aa, chain - ## HITS:1 COG:NMB0013 KEGG:ns NR:ns ## COG: NMB0013 COG3399 # Protein_GI_number: 15675961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 149 1 149 149 176 78.0 1e-44 MSIYALAHIIHVYCAIAFVGGVFFEMLVLSVLHTGRVSRESRREVERAMSHRAVRVMPIV VITLFISGIVMVYNRYLPMLHHPLDSAFSIMLSVKILLAVSVLVHFAIAVVKMARHTLTV GWSKYIHAVVFSHMLFIVFFAKAMFYLSW >gi|241319972|gb|ACQV01000021.1| GENE 44 31065 - 31277 430 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225076349|ref|ZP_03719548.1| ## NR: gi|225076349|ref|ZP_03719548.1| hypothetical protein NEIFLAOT_01393 [Neisseria flavescens NRL30031/H210] # 1 70 6 75 75 85 100.0 8e-16 MKKTFAKTVTLIMLAASLGACANMTQTQRNTAAGAVLGGVAGNLIGGDTGSTLGGAALGG VIGSQVHTRY >gi|241319972|gb|ACQV01000021.1| GENE 45 31342 - 32262 1348 306 aa, chain - ## HITS:1 COG:NMB0173 KEGG:ns NR:ns ## COG: NMB0173 COG0583 # Protein_GI_number: 15676100 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 304 1 304 306 530 90.0 1e-150 MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELSVSLFDRSSNDIITTEA GERIVAQARRVLEEAELIKHLANEEQNELEGAFKLGLIFTVAPYLLPKLITALRETAPKM PLMLEENYTHILTESLKRGDVDAIVVAEPFQEPGIVTEPLYDEPFFVIVPKGHHFEELDA VTPQLLSEEQVLLLSEGNCMRDQVLASCSELASKQKIQGLTNTLQGSSINTIRHMVASGL AISVMPATALTENDHMLFSIIPFEGNAPHRRVVLAYRRNFVRPKALTALRTAILQSQLTG VTFVNE >gi|241319972|gb|ACQV01000021.1| GENE 46 32266 - 32529 473 87 aa, chain - ## HITS:1 COG:NMB0172 KEGG:ns NR:ns ## COG: NMB0172 COG0851 # Protein_GI_number: 15676099 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Neisseria meningitidis MC58 # 1 86 1 86 87 133 91.0 9e-32 MSLLDMLFGRKPKTATVARDRLQIIIAQERAQEGQAPDYLPTLRKELLEVLSKYVNVSLD DIRISQEKQDGLDVLELNITLPEQKKA >gi|241319972|gb|ACQV01000021.1| GENE 47 32533 - 33348 1365 271 aa, chain - ## HITS:1 COG:NMA0100 KEGG:ns NR:ns ## COG: NMA0100 COG2894 # Protein_GI_number: 15793128 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Neisseria meningitidis Z2491 # 1 271 1 271 271 491 92.0 1e-139 MSKIIVVTSGKGGVGKTTTSASIATGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDL INVIHGEATLNQALIKDKNCENLYILPASQTRDKDALTREGVDNVMKELASEKMGFEFII CDSPAGIEQGALMALYFADEAIITTNPEVSSVRDSDRILGILQSKSRKAEQGSTVKEHLL ITRYSPERVAKGEMLSVQDICDILRIPLIGVIPESQNVLQASNSGEPVIHQDNAAAAEAY KDVIARLLGENREMRFLEAEKKSFLKRLFGG >gi|241319972|gb|ACQV01000021.1| GENE 48 33375 - 34100 1140 241 aa, chain - ## HITS:1 COG:NMB0170 KEGG:ns NR:ns ## COG: NMB0170 COG0850 # Protein_GI_number: 15676097 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Neisseria meningitidis MC58 # 6 241 8 237 237 301 65.0 8e-82 MTMKPAFDIKTSRLDVLSIHLHTADLTELEEFLRQLAGQSQDEFVPFILDVQDFDHPESI DLGGMISLFARYGMQILGLHHTSDTWAAAAARYHLVFKQGNSTQAADTQAAPASRQAPQP QDVQATVINNPTVLVSTPVRTGQQVYAENGDLIVTGIVSQGAELIADGNIHIYAPMRGRA LAGAKGNTNARIFIHSMQAELVSVAGIYRNFEQDLPEHLHKKPVQVSLQDNRLVISAIDA E >gi|241319972|gb|ACQV01000021.1| GENE 49 34242 - 35477 1195 411 aa, chain - ## HITS:1 COG:NMA2198 KEGG:ns NR:ns ## COG: NMA2198 COG0415 # Protein_GI_number: 15795067 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Neisseria meningitidis Z2491 # 3 406 15 425 433 332 44.0 6e-91 MKSAHVLVWFRRNLRLHDNAALNAAVASGLPIACVWVSQRPSENHNPRQSLFHYQAAQEL HTRLATHHIPLYVVASDEDLLPLAAAFNAHTVITDEAYTEAEIRQDNHLWHNFDRAGITL QHANDRGILAKFPLMDANGLPYTDFAAYKQAWLQAYSGQRPSETELPVQTRQNVPLFPAH TGAVLPAYQQGGETAALTQWHAFKQNLVHYPITQNFPARKNTSLLNAYLSAGCISPRLLA AEGLANRHFEWLDKLIFRDYCYQLAYHRRLPETTDAAPVREYWRLGQTGVPIIDASIRGL EATGHLHPVLQQLCAHYFCHALNFDPNQGIAWAASVQTGTDPALNQANWHLAAQDTATVR YAHRSHQIDPDGSYIRSYVPELAHLPSTLIHTPWAAADDIDTHGYPFPKAV >gi|241319972|gb|ACQV01000021.1| GENE 50 35604 - 36461 1092 285 aa, chain + ## HITS:1 COG:no KEGG:APP7_1882 NR:ns ## KEGG: APP7_1882 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae_AP76 # Pathway: not_defined # 7 277 5 278 283 291 54.0 3e-77 MTEQTVLALITCQTYPEPSDNLKTLAACLETIGVKTVFDAWQNYPSAPFLLPLCAWDYAA EPEAFRQWLEQAERAGQRFINPPELMAWNMEKTYLCDLAERGARVIPSVFVPPQKAELAD ILNQQGWTEAVIKPAFGQSGKGVVKVYAETLDVNMADYPQGVIVQPYIREIETAGETSLV FFNGAFSHAVRRQPPQGEWRANSAYGVSVFGIDPPEFVIRAAQDVLAALPQMPVYARVDG TLVGDTFLLNELELIEPALYLHTSEGAPERFARVLAQLLGQHSST >gi|241319972|gb|ACQV01000021.1| GENE 51 36832 - 38223 1166 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 8 457 3 445 456 453 52 1e-127 MQFFLDNLKAFFETISGWVWGPIMLMLLVGTGILLTVLLKGLQFTMLGYALKQAFVPSKK HEDGEDHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGPGAVFWMWMTAIFGMATKY GEGVLAVKYRVTNSKGEMSGGPMYYIEKGLGKNWKWMAVAFALFGTFASFGIGSSVQSNS VAQAVQTSFGVEPAYTGLILTVLTAIVLLGGIKGIAKAASFIVPAMAVFYVVGGIAIIVI NSDVLMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVARGVFSNEAGMGSAPIAAAAAKTDH PVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGAGGEFVKPELSGAALTTVTFQKMLPGI GGWIVTIGLIFFAYSTILGWCYYGEKCAVYVFGEKFAGLYRVGYVSSVMLGTVLSLDLVW LASDTFNGLMALPNLIALLLMAKVIVNETRDFKQKIKNGELPH >gi|241319972|gb|ACQV01000021.1| GENE 52 38307 - 39557 1651 416 aa, chain + ## HITS:1 COG:NMB0176 KEGG:ns NR:ns ## COG: NMB0176 COG0665 # Protein_GI_number: 15676103 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis MC58 # 1 416 1 416 418 817 94.0 0 MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANAGQLSYGYTTPWAAPGI PTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAARYQTNKERMVRISEYSREMFR RFEAQTGMNFEGRKKGTLQIFRQAKEVEAAEQDIAVLERYGVPYRRLKPEECAEFEPALA CVTAKIAGGLHLPADATGDCHLFTQNLYQLCLEKGVQFQFNQTIRRIEHNGQRISAVETE KERFEADAFVCALGCFSRTVLAQLDLNLPIYPVKGYSLTLPVTNSDGAPVSTVLDESYKV AITRFDNRIRVGGMAELSGYEIKLLEKRRETLALVVNDLFPEGGDLSQALFWSGLRPMTP DSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSAKLTADIVSGKDTEIRSDDLSLSRY >gi|241319972|gb|ACQV01000021.1| GENE 53 39758 - 40552 831 264 aa, chain + ## HITS:1 COG:NMB0175 KEGG:ns NR:ns ## COG: NMB0175 COG0428 # Protein_GI_number: 15676102 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Neisseria meningitidis MC58 # 1 264 6 269 269 457 99.0 1e-129 MSNLAIAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFGLAFAGGAMVYVSLTEIFSKSS EAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNPHETLDAQDPSFQESKRRHIARVG MMAAFAITAHNFPEGLATFFATLENPAVGMPLALAIAIHNIPEGISIAAPVYFATRSRKK TVWACLLSGLAEPLGAALGYLILQPFLSPAVFGSVFGVIAGVMVFLALDELLPAAKRYSD GHETVYGLTTGMAVIAVSLVLFHF >gi|241319972|gb|ACQV01000021.1| GENE 54 40649 - 43645 4223 998 aa, chain + ## HITS:1 COG:NMB0174 KEGG:ns NR:ns ## COG: NMB0174 COG0525 # Protein_GI_number: 15676101 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 997 1 944 945 1666 81.0 0 MLDKYNPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMD GLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRHDLGREKFLEKVWEWKEVS GGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLFEQGLIYRGKRLVNWDPVLGT AVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRPETLLGDVAVAVNPEDERYTHLI GKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAHDFNDYEVGKRHRLPLIVIFGLDAK ILKQAEQYSFQQFGLQGGDGEKFAPISIPQKYAGLDRFVARKQMVADLQEQGFLVEIKPH TLMTPKGDRTGSVIEPMLTSQWFVAMSDKPNNPDNPRMYEVHEDKNQQPKCPEPDSEFKG LSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYGSNGRTF VARTENEAYKQYIETLPNLRRELSIDKDNITEADIKLVKSKGYILTREEDVLDTWFSSAL VPFSTLGWPSETDELKAFLPSNVLVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIV RDHEGKKMSKSEGNVIDPVDLIDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIP SMGADALRFTMASYASLGRSVNFDFKRAEGYRNFCNKLWNATNFVLMNTENQDCGQDEMQ PLAFTFADQWIIGKLQQAEAAVAEAFETYRFDLAAQTLYEFVWNEYCDWYIELAKVQIQT GCPTTQRTTRRTLVRVLETILRLLHPIMPFITEELWQVVAPLANAKTADSIMLAAYPQAD KEKIVQTAFDKMAALKDLVEEVRKLRGEMGIAPNVKAPLFVEGSAELEGLLKYLPSLTRL TEAKLVDSLPEAEDAPVAVCNGARLMLKVEIDKAAETVRLSKEAEKLQKALDKLSAKLGK PGYVDKAPAHLVEKDKAELAELADKMGKVEGQLAKLKA >gi|241319972|gb|ACQV01000021.1| GENE 55 43774 - 44553 263 259 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759620|ref|ZP_04757721.1| ## NR: gi|241759620|ref|ZP_04757721.1| hypothetical protein NEIFL0001_0397 [Neisseria flavescens SK114] # 1 259 14 272 272 471 100.0 1e-131 MKNEIYSLQEKIDEFVDTNGINSTISKLREYLDLSEHDNAKLKYCIGNTLIGKFIPDHLK HSIICCIAKSLEFQNIPHENIYSKNELIEFDPAKEGKNILKHGIHFNEIISYLDDKASLI SEQRTKAGEKRVVYFMGLHKKNIVFIAAENKPDSNDLYLDQEIRDKCRPYEQDFANASRE EKIEIIRKIMEENKELGKLSNKPKPIRIISARYFGSSEAEIKATIREVIKDGDLDQNAID GLRDSIQEFLEEYGYKNEP >gi|241319972|gb|ACQV01000021.1| GENE 56 44891 - 45832 1588 313 aa, chain - ## HITS:1 COG:NMB2042 KEGG:ns NR:ns ## COG: NMB2042 COG3842 # Protein_GI_number: 15677865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 312 1 311 312 379 60.0 1e-105 MLQLKNINKRFGSKTVAQDINLNVEAGKILAVLGRSGCGKSTLLKTIVGLVHPDSGEVWL NGDNITDTPSEKRNISLMFQDYALLPHLTALDNVGFGLKMRRLPKAEIEEQSMQALRDIG LEHEAQRKPESLSGGEQQRLALARALITRPSLLLLDEAFSSLDTHLRHHLRTLTAERIRS QNIPAILVTHSAEEACTMADTIAIMHEGRILQHGTPETLIRRPVNAQAALLLGLANTGDT RYIPQHAIRFDPNGTAVRISEAVPLAEGTRLTLAHPQYGDLIWYPHADHDTDKLQTGQEI RISVDESQIVWFD >gi|241319972|gb|ACQV01000021.1| GENE 57 45848 - 46738 792 296 aa, chain - ## HITS:1 COG:NMA0394 KEGG:ns NR:ns ## COG: NMA0394 COG0494 # Protein_GI_number: 15793402 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 4 291 3 290 291 371 63.0 1e-102 MSQSFRFEQVFTPDVHDALWDWAQTSYGASDDWCILYLNGLPLGRLNPLWRERLRQDWTG RQSTLSDGLNLETDSWPEMGDSLQTLAQQWRECGWLKGWRGEKFDICDQSGKPLCALERA AFRPFGLMSQAVHLNGLVETEDGLRFWIGRRSPHKAVDPNKLDNLTGGGISSGERPSEAV CREGEEEAGIPASLTPHIRPTAQIYSLRPVNRGVHNEILYIFDIVLPEGFQPANQDGEVA GFELMDIPTLLDAMLGGHMMHDAQLVTIEACRRYGLIDPKHPLSAWLDSIRCRPHF >gi|241319972|gb|ACQV01000021.1| GENE 58 46859 - 47443 909 194 aa, chain + ## HITS:1 COG:NMA0415 KEGG:ns NR:ns ## COG: NMA0415 COG0288 # Protein_GI_number: 15793420 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Neisseria meningitidis Z2491 # 1 194 1 192 199 325 81.0 5e-89 MSELSEILAYNQHFVETGEYEKYFTNKYPGRELAILSCMDARIIELLPNALGLKNGDAKL IKNAGALVTHPWGSVMRSLLVAVFELKVKEIMVIAHHDCGMRGLHAEEFLQRVHDSNIPD DRIETLRNAGIDLDGWLTGFDNVEDSVRHTVELIRKHPLMPNNIAIHGLVIHPTTGKLNL IVDGSLPASDGQNI >gi|241319972|gb|ACQV01000021.1| GENE 59 47462 - 48067 857 201 aa, chain + ## HITS:1 COG:NMB2024 KEGG:ns NR:ns ## COG: NMB2024 COG1057 # Protein_GI_number: 15677849 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Neisseria meningitidis MC58 # 1 201 1 201 201 320 76.0 1e-87 MKNIGLFGGTFDPIHNGHLHIARAFADEIGLDLVVFLPAGDPYHKDSTRTPAQERLNMVE LAIADEPKFAASDCDIVRDGATYTFDTVQIFRQQFPGAQLWWLMGSDSLMQLHTWKKWQT LVRQTHIAIAMRQGDNLNKTPRELHAWLGEALQNGSVRILNAPLHNTSSTQIRADLAKTH HSDGLPQPVAQYIRQHKLYEK >gi|241319972|gb|ACQV01000021.1| GENE 60 48126 - 48512 686 128 aa, chain + ## HITS:1 COG:NMA0417 KEGG:ns NR:ns ## COG: NMA0417 COG0799 # Protein_GI_number: 15793422 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Neisseria meningitidis Z2491 # 1 128 1 128 128 234 98.0 3e-62 MNEQELQDLQKMVEVAVNALEDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANN VAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWGGEKPSFHAGM QKPWHAAD >gi|241319972|gb|ACQV01000021.1| GENE 61 48621 - 50015 1756 464 aa, chain + ## HITS:1 COG:NMB2007 KEGG:ns NR:ns ## COG: NMB2007 COG1643 # Protein_GI_number: 15678020 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis MC58 # 4 464 3 463 463 868 96.0 0 MPQPDFAQTLSKDRHFLRSAFKNPNKYGGLAKVEEKYKKSHDLYLQRLSKLPKPEFDNTL PVHEKLDEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIID EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVE ILYRPLTSKDEDDAEVELTDAIVDAADELARHGEGDILVFLPGEREIREAAEALRKSTLR RNDEILPLFARLSHAEQHKIFHPSGVKRRIVLATNIAETSLTVPGIKYVIDTGLARVKRY SARAKVEQLHIEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRPEFTDPEIVRSNLA AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEAV >gi|241319972|gb|ACQV01000021.1| GENE 62 50489 - 50707 253 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759659|ref|ZP_04757760.1| ## NR: gi|241759659|ref|ZP_04757760.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 72 1 72 72 94 100.0 2e-18 MKILLKNTIDTLKQLKMEMHDVMDSSTQAKLDQVIQDLEQHNDLTKSKLLQILGEILEWL PVIRGIMQLLDK >gi|241319972|gb|ACQV01000021.1| GENE 63 50762 - 51049 296 95 aa, chain + ## HITS:1 COG:no KEGG:Pecwa_1396 NR:ns ## KEGG: Pecwa_1396 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: P.wasabiae # Pathway: not_defined # 1 93 1 93 96 79 46.0 4e-14 MNIGRAIKLCRNQKGFTKTKLAENSGLSVSYLTLLEQGKRDPNLSTLEKICLALQIPSTV LMFLAADADEKAGMSTELSEKLSALALSAIGDNDE >gi|241319972|gb|ACQV01000021.1| GENE 64 51042 - 51998 250 318 aa, chain + ## HITS:1 COG:MA2102 KEGG:ns NR:ns ## COG: MA2102 COG3344 # Protein_GI_number: 20090946 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Methanosarcina acetivorans str.C2A # 50 264 88 295 563 88 30.0 2e-17 MNKPVSFCYPHKPIASLEKLAICLGITLEELLYLRQYSDSFYFLHEHKAKPDGTFRDTYN VRDRLKIIHEKIAKKFFKILDYPEYLQGGIQKRSSITNAKEHIGMNILIKEDISNFFPSI SKKIVHQVWAGFFHFPHDVADCLAELVTYQGYLVQGSKVSGFLCNLIWWQREADLVAEFQ KQGLVYTRFVDDVTVSAKRNLSKAEMQKIIGKIYSLFHSVDAKPNRKKHKVMHKGHQQTV NNMNVSVDKPTLPKEKRKEIRSIVFKCEQAFQNKEIHVTTYEKLFNSAKGKILHLKQFHV AQAEKLLQRLENIQPKYF >gi|241319972|gb|ACQV01000021.1| GENE 65 52115 - 53482 1149 455 aa, chain + ## HITS:1 COG:NMA0430 KEGG:ns NR:ns ## COG: NMA0430 COG1643 # Protein_GI_number: 15793435 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Neisseria meningitidis Z2491 # 40 447 38 445 1041 723 92.0 0 MLDLRIMQNTKNHHNTPSVPLSGSLLPRPNKPSLSEPPPRYRLTKLGEQMARLPIDPKIA RILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWD SFQRERDKGLSNKQLVQWCRQCFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPPE VRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKS PDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAAIQPEWIEQEAPH LVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAREIFIRSALVAQE CDLKAEFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPDFYTANAVSDGLHP TNPQQTTPSPVGEGWGEAKQLPHKPTFRNRSKPSP Prediction of potential genes in microbial genomes Time: Thu May 26 11:44:03 2011 Seq name: gi|241319676|gb|ACQV01000022.1| Neisseria flavescens SK114 ctg1118407793866, whole genome shotgun sequence Length of sequence - 262951 bp Number of predicted genes - 256, with homology - 252 Number of transcription units - 156, operones - 62 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 5 - 64 1.7 2 2 Tu 1 . + CDS 271 - 876 559 ## COG2186 Transcriptional regulators + Term 890 - 932 13.5 + Prom 899 - 958 5.7 3 3 Tu 1 . + CDS 987 - 2180 1477 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 2228 - 2273 9.2 - TRNA 2272 - 2347 77.2 # Arg CCG 0 0 + Prom 2538 - 2597 3.4 4 4 Tu 1 . + CDS 2633 - 3490 1427 ## COG3245 Cytochrome c5 + Term 3518 - 3552 4.0 + Prom 3522 - 3581 6.0 5 5 Tu 1 . + CDS 3690 - 5027 1915 ## COG1109 Phosphomannomutase + Term 5057 - 5102 9.6 - Term 5045 - 5090 9.6 6 6 Tu 1 . - CDS 5104 - 5724 978 ## COG2834 Outer membrane lipoprotein-sorting protein - Prom 5940 - 5999 5.2 + Prom 5933 - 5992 6.6 7 7 Op 1 . + CDS 6014 - 6844 883 ## COG2833 Uncharacterized protein conserved in bacteria 8 7 Op 2 . + CDS 6861 - 7805 994 ## COG1230 Co/Zn/Cd efflux system component + Term 7815 - 7861 5.1 9 8 Op 1 . + CDS 7875 - 8525 813 ## COG0546 Predicted phosphatases + Prom 8538 - 8597 2.8 10 8 Op 2 . + CDS 8625 - 9818 1947 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 9828 - 9886 14.9 - Term 9822 - 9866 13.2 11 9 Tu 1 . - CDS 9883 - 10296 352 ## COG1238 Predicted membrane protein - Prom 10342 - 10401 6.3 + Prom 10362 - 10421 5.9 12 10 Op 1 . + CDS 10636 - 11793 1317 ## COG0738 Fucose permease + Term 11804 - 11861 14.1 + Prom 11807 - 11866 5.3 13 10 Op 2 . + CDS 11886 - 12509 616 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold + Term 12612 - 12657 13.1 + Prom 12553 - 12612 6.5 14 11 Tu 1 . + CDS 12690 - 14069 1845 ## COG1757 Na+/H+ antiporter + Term 14102 - 14148 13.2 + Prom 14124 - 14183 5.3 15 12 Tu 1 . + CDS 14207 - 14836 738 ## COG0177 Predicted EndoIII-related endonuclease + Term 14854 - 14888 7.6 - Term 14840 - 14876 8.0 16 13 Tu 1 . - CDS 14893 - 18501 5446 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase - Prom 18580 - 18639 3.6 - Term 18673 - 18715 12.0 17 14 Tu 1 . - CDS 18726 - 20252 2098 ## COG0591 Na+/proline symporter - Prom 20431 - 20490 8.9 - Term 20624 - 20661 1.0 18 15 Tu 1 . - CDS 20708 - 21502 1065 ## COG2116 Formate/nitrite family of transporters - Prom 21587 - 21646 3.3 - Term 21687 - 21729 10.2 19 16 Tu 1 . - CDS 21755 - 23968 3202 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 24107 - 24166 5.2 + Prom 24049 - 24108 4.0 20 17 Tu 1 . + CDS 24132 - 24767 880 ## COG2999 Glutaredoxin 2 + Term 24790 - 24828 8.5 - Term 24778 - 24816 8.5 21 18 Op 1 8/0.053 - CDS 24824 - 25342 802 ## COG3009 Uncharacterized protein conserved in bacteria 22 18 Op 2 11/0.035 - CDS 25342 - 27003 2406 ## COG3008 Paraquat-inducible protein B 23 18 Op 3 . - CDS 27000 - 28310 900 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 28342 - 28401 4.8 + Prom 28484 - 28543 7.7 24 19 Tu 1 . + CDS 28714 - 29337 944 ## COG3230 Heme oxygenase 25 20 Tu 1 . - CDS 29458 - 31002 1143 ## NGK_2582 hypothetical protein - Prom 31183 - 31242 8.7 + Prom 31135 - 31194 8.2 26 21 Op 1 . + CDS 31372 - 32367 1011 ## NMC1946 haemoglobin-haptoglobin-utilization protein 27 21 Op 2 . + CDS 32422 - 34839 3151 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 34992 - 35038 13.5 - Term 34980 - 35026 12.7 28 22 Tu 1 . - CDS 35049 - 36659 1684 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 36683 - 36742 4.6 + Prom 36688 - 36747 4.8 29 23 Tu 1 . + CDS 36785 - 37375 668 ## COG2365 Protein tyrosine/serine phosphatase + Term 37398 - 37442 13.1 - Term 37381 - 37435 18.5 30 24 Tu 1 . - CDS 37449 - 38267 959 ## COG1045 Serine acetyltransferase - Prom 38296 - 38355 4.1 + Prom 38255 - 38314 6.3 31 25 Tu 1 . + CDS 38427 - 38990 863 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Prom 39137 - 39196 4.3 32 26 Tu 1 . + CDS 39295 - 41223 3334 ## COG0443 Molecular chaperone + Term 41242 - 41275 4.5 + Prom 41300 - 41359 3.4 33 27 Tu 1 . + CDS 41490 - 41708 387 ## + Term 41732 - 41780 13.0 - Term 41717 - 41772 17.4 34 28 Tu 1 . - CDS 41782 - 43122 1311 ## NMB1645 hypothetical protein - Prom 43212 - 43271 5.8 - TRNA 43286 - 43370 74.1 # Leu TAG 0 0 + Prom 43405 - 43464 4.6 35 29 Op 1 . + CDS 43565 - 44197 746 ## NMB1253 hypothetical protein 36 29 Op 2 . + CDS 44253 - 44783 313 ## COG0807 GTP cyclohydrolase II + Term 44930 - 44996 30.0 + TRNA 44908 - 44983 95.7 # Val TAC 0 0 + TRNA 45016 - 45092 93.9 # Asp GTC 0 0 - Term 45222 - 45266 14.8 37 30 Op 1 2/0.316 - CDS 45289 - 47274 3260 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Term 47299 - 47340 9.1 38 30 Op 2 . - CDS 47343 - 47864 760 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 47889 - 47948 3.3 39 31 Tu 1 . + CDS 48208 - 49353 1640 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 49372 - 49424 18.1 + Prom 49367 - 49426 7.9 40 32 Op 1 9/0.053 + CDS 49461 - 49733 452 ## COG3830 ACT domain-containing protein 41 32 Op 2 . + CDS 49749 - 51104 1804 ## COG2848 Uncharacterized conserved protein + Term 51123 - 51163 9.8 - Term 51110 - 51151 10.0 42 33 Op 1 . - CDS 51154 - 51642 478 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 43 33 Op 2 . - CDS 51773 - 53302 2570 ## COG0433 Predicted ATPase - Prom 53350 - 53409 6.6 + Prom 53411 - 53470 4.9 44 34 Op 1 . + CDS 53543 - 54772 1238 ## COG0477 Permeases of the major facilitator superfamily + Term 54775 - 54825 9.1 45 34 Op 2 . + CDS 54834 - 55643 1247 ## COG0796 Glutamate racemase 46 35 Tu 1 . + CDS 56033 - 56551 205 ## LBF_2143 hypothetical protein + Term 56640 - 56683 1.8 - Term 56894 - 56937 10.0 47 36 Op 1 11/0.035 - CDS 56957 - 57622 1067 ## COG0637 Predicted phosphatase/phosphohexomutase 48 36 Op 2 . - CDS 57635 - 59893 3541 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 49 36 Op 3 . - CDS 59968 - 61320 1448 ## COG0477 Permeases of the major facilitator superfamily - Prom 61425 - 61484 5.0 + Prom 61428 - 61487 4.8 50 37 Tu 1 . + CDS 61661 - 63337 2264 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 63355 - 63400 12.2 - Term 63343 - 63387 11.4 51 38 Tu 1 . - CDS 63403 - 64038 698 ## COG1309 Transcriptional regulator - Prom 64067 - 64126 11.6 + Prom 64105 - 64164 11.0 52 39 Op 1 27/0.000 + CDS 64265 - 65533 1732 ## COG0845 Membrane-fusion protein 53 39 Op 2 9/0.053 + CDS 65545 - 68757 4012 ## COG0841 Cation/multidrug efflux pump 54 39 Op 3 . + CDS 68814 - 70220 544 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 70238 - 70293 11.4 - Term 70232 - 70275 10.0 55 40 Tu 1 . - CDS 70295 - 71632 1641 ## NMCC_1544 integral membrane protein - Term 72142 - 72188 7.1 56 41 Tu 1 . - CDS 72207 - 72692 696 ## COG1522 Transcriptional regulators - Prom 72723 - 72782 5.2 + Prom 72771 - 72830 3.0 57 42 Tu 1 . + CDS 72885 - 73943 1207 ## COG0787 Alanine racemase + Term 73958 - 73999 10.0 - Term 73944 - 73986 10.2 58 43 Tu 1 . - CDS 74003 - 74746 1243 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 74772 - 74831 5.1 + Prom 74931 - 74990 6.9 59 44 Op 1 9/0.053 + CDS 75077 - 77158 3123 ## COG1966 Carbon starvation protein, predicted membrane protein 60 44 Op 2 . + CDS 77124 - 77342 160 ## COG2879 Uncharacterized small protein + Term 77357 - 77396 10.0 - Term 77392 - 77439 -0.7 61 45 Op 1 . - CDS 77460 - 77750 484 ## NT05HA_1184 hypothetical protein 62 45 Op 2 . - CDS 77766 - 78746 1251 ## COG2214 DnaJ-class molecular chaperone - Prom 78778 - 78837 7.5 - Term 78866 - 78917 10.1 63 46 Tu 1 . - CDS 78931 - 79413 716 ## TERTU_0073 hypothetical protein - Prom 79445 - 79504 6.2 - Term 79522 - 79577 17.7 64 47 Op 1 . - CDS 79586 - 80290 982 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 80434 - 80493 3.8 - Term 80494 - 80553 8.3 65 47 Op 2 . - CDS 80561 - 82945 3474 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 83182 - 83241 13.4 + Prom 83159 - 83218 8.6 66 48 Tu 1 . + CDS 83363 - 84184 991 ## COG1806 Uncharacterized protein conserved in bacteria + Term 84192 - 84240 14.3 - Term 84179 - 84230 8.4 67 49 Tu 1 . - CDS 84241 - 84807 1009 ## COG0717 Deoxycytidine deaminase 68 50 Op 1 . - CDS 84934 - 85362 705 ## COG4642 Uncharacterized protein conserved in bacteria 69 50 Op 2 . - CDS 85388 - 86170 996 ## COG1397 ADP-ribosylglycohydrolase 70 50 Op 3 . - CDS 86249 - 87148 1476 ## COG2974 DNA recombination-dependent growth factor C - Prom 87301 - 87360 79.9 + TRNA 87282 - 87357 55.4 # Glu TTC 0 0 + Prom 87282 - 87341 78.7 71 51 Op 1 . + CDS 87483 - 88778 1713 ## COG0172 Seryl-tRNA synthetase + Prom 88785 - 88844 3.3 72 51 Op 2 . + CDS 88865 - 89872 1366 ## COG3039 Transposase and inactivated derivatives, IS5 family - Term 89950 - 89988 3.5 73 52 Op 1 . - CDS 90072 - 90875 1459 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 74 52 Op 2 . - CDS 90952 - 91203 571 ## NGK_2005 hypothetical protein - Prom 91228 - 91287 3.4 + Prom 91208 - 91267 6.1 75 53 Tu 1 . + CDS 91366 - 92166 970 ## NGK_2004 hypothetical protein + Prom 92190 - 92249 6.8 76 54 Tu 1 . + CDS 92288 - 92848 683 ## Shew_1881 hypothetical protein + Prom 92871 - 92930 1.6 77 55 Op 1 . + CDS 92962 - 94131 1458 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 78 55 Op 2 . + CDS 94218 - 94424 334 ## NGK_2001 hypothetical protein + Term 94442 - 94496 15.1 - Term 94437 - 94476 8.3 79 56 Op 1 . - CDS 94497 - 95288 1084 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 95393 - 95452 4.4 - Term 95437 - 95479 11.1 80 56 Op 2 . - CDS 95485 - 96876 1370 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 97009 - 97068 79.6 + TRNA 96992 - 97068 81.7 # Arg ACG 0 0 + TRNA 97081 - 97155 64.3 # Glu TTC 0 0 + Prom 97083 - 97142 80.4 81 57 Op 1 . + CDS 97325 - 99550 1372 ## COG0658 Predicted membrane metal-binding protein + Term 99562 - 99602 10.6 + Prom 99870 - 99929 3.4 82 57 Op 2 . + CDS 99955 - 100575 735 ## COG0135 Phosphoribosylanthranilate isomerase 83 57 Op 3 . + CDS 100612 - 101214 421 ## COG3663 G:T/U mismatch-specific DNA glycosylase 84 57 Op 4 . + CDS 101219 - 101629 295 ## gi|261380440|ref|ZP_05985013.1| conserved hypothetical protein + Prom 101644 - 101703 2.7 85 58 Tu 1 . + CDS 101741 - 102943 2071 ## COG0133 Tryptophan synthase beta chain + Term 102962 - 103021 5.7 + Prom 102982 - 103041 3.0 86 59 Op 1 1/0.316 + CDS 103138 - 104043 686 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 87 59 Op 2 12/0.018 + CDS 104096 - 105385 1045 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 88 59 Op 3 . + CDS 105382 - 105591 298 ## COG0132 Dethiobiotin synthetase 89 59 Op 4 2/0.316 + CDS 105594 - 106037 517 ## COG0132 Dethiobiotin synthetase 90 59 Op 5 6/0.070 + CDS 106027 - 106521 100 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) + Prom 106523 - 106582 8.9 91 60 Tu 1 2/0.316 + CDS 106696 - 107616 945 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 107650 - 107691 6.3 + Prom 107800 - 107859 8.5 92 61 Op 1 3/0.088 + CDS 107886 - 108335 714 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 93 61 Op 2 3/0.088 + CDS 108339 - 109301 1150 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 94 61 Op 3 . + CDS 109282 - 110136 1081 ## COG1660 Predicted P-loop-containing kinase 95 61 Op 4 . + CDS 110171 - 110407 316 ## gi|241759689|ref|ZP_04757789.1| putative lipoprotein 96 61 Op 5 . + CDS 110500 - 111441 1191 ## COG1161 Predicted GTPases + Term 111449 - 111489 9.8 - Term 111436 - 111477 10.0 97 62 Op 1 . - CDS 111497 - 112090 892 ## D11S_0531 outer membrane lipoprotein carrier protein LolA 98 62 Op 2 . - CDS 112149 - 114371 3616 ## COG2838 Monomeric isocitrate dehydrogenase - Prom 114470 - 114529 2.5 - Term 114499 - 114530 2.5 99 63 Op 1 . - CDS 114545 - 115747 1191 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 100 63 Op 2 . - CDS 115751 - 116269 613 ## D11S_0529 lipoprotein, putative 101 63 Op 3 . - CDS 116361 - 117599 1572 ## COG0644 Dehydrogenases (flavoproteins) - Prom 117645 - 117704 2.0 102 64 Op 1 . - CDS 117734 - 120052 2396 ## COG4258 Predicted exporter - Prom 120084 - 120143 1.8 103 64 Op 2 . - CDS 120146 - 120763 191 ## DNO_0905 4'-phosphopantetheinyl transferase domain-containing protein - Term 120764 - 120802 7.0 104 64 Op 3 . - CDS 120816 - 121328 628 ## NMO_1485 hypothetical protein - Prom 121562 - 121621 80.3 + TRNA 121528 - 121620 67.0 # Ser GCT 0 0 + Prom 121545 - 121604 80.4 105 65 Tu 1 . + CDS 121701 - 122261 372 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 122276 - 122311 7.4 - Term 122254 - 122307 9.5 106 66 Tu 1 . - CDS 122316 - 123122 1086 ## COG5266 ABC-type Co2+ transport system, periplasmic component - Prom 123169 - 123228 7.3 - Term 123193 - 123232 9.1 107 67 Op 1 . - CDS 123273 - 124649 1899 ## COG1066 Predicted ATP-dependent serine protease - Term 124673 - 124721 15.8 108 67 Op 2 8/0.053 - CDS 124745 - 126217 2578 ## COG0793 Periplasmic protease - Prom 126304 - 126363 2.4 - Term 126374 - 126429 17.1 109 68 Tu 1 . - CDS 126433 - 128307 2701 ## COG4942 Membrane-bound metallopeptidase - Prom 128339 - 128398 4.6 + Prom 128431 - 128490 4.1 110 69 Op 1 2/0.316 + CDS 128515 - 129027 557 ## COG3045 Uncharacterized protein conserved in bacteria 111 69 Op 2 8/0.053 + CDS 129055 - 129603 839 ## COG1678 Putative transcriptional regulator 112 69 Op 3 . + CDS 129596 - 130051 458 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 130064 - 130114 16.2 + Prom 130124 - 130183 7.3 113 70 Tu 1 . + CDS 130216 - 130638 808 ## COG3753 Uncharacterized protein conserved in bacteria + Term 130652 - 130702 13.4 + Prom 130699 - 130758 5.3 114 71 Tu 1 . + CDS 130788 - 131336 1004 ## COG2128 Uncharacterized conserved protein + Term 131347 - 131382 7.4 + Prom 131344 - 131403 3.7 115 72 Op 1 2/0.316 + CDS 131462 - 132553 1709 ## COG1960 Acyl-CoA dehydrogenases + Term 132585 - 132626 9.6 116 72 Op 2 . + CDS 132638 - 132808 368 ## COG1773 Rubredoxin + Term 132820 - 132866 9.1 - Term 132814 - 132849 7.4 117 73 Tu 1 . - CDS 132856 - 134046 1653 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 134070 - 134129 3.3 118 74 Tu 1 . - CDS 134209 - 134415 91 ## gi|288576054|ref|ZP_06394140.1| hypothetical protein NEIMUCOT_05597 + Prom 134163 - 134222 3.9 119 75 Op 1 . + CDS 134368 - 134544 268 ## gi|255067163|ref|ZP_05319018.1| transposase 120 75 Op 2 . + CDS 134747 - 135343 563 ## COG2801 Transposase and inactivated derivatives + Term 135380 - 135431 13.4 - Term 135374 - 135410 8.9 121 76 Tu 1 . - CDS 135429 - 136601 1811 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 136829 - 136888 5.1 - Term 136877 - 136912 7.4 122 77 Tu 1 . - CDS 136942 - 137622 204 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 - Prom 137663 - 137722 3.4 123 78 Tu 1 . - CDS 137843 - 138577 820 ## CV_0489 hypothetical protein - Prom 138746 - 138805 5.4 + Prom 138694 - 138753 4.0 124 79 Tu 1 . + CDS 138877 - 139266 714 ## APL_0356 hypothetical protein + Term 139279 - 139339 8.0 + Prom 139304 - 139363 4.0 125 80 Op 1 16/0.000 + CDS 139388 - 140314 382 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Prom 140349 - 140408 5.3 126 80 Op 2 . + CDS 140454 - 143243 3787 ## COG0060 Isoleucyl-tRNA synthetase + Term 143257 - 143319 19.5 + Prom 143458 - 143517 4.7 127 81 Tu 1 . + CDS 143551 - 143925 312 ## gi|261380482|ref|ZP_05985055.1| hypothetical protein NEISUBOT_04482 + Term 144074 - 144124 4.4 - Term 144064 - 144110 7.4 128 82 Tu 1 . - CDS 144135 - 144542 563 ## NGO1063 hypothetical protein - Prom 144647 - 144706 3.0 - Term 144700 - 144744 5.1 129 83 Op 1 . - CDS 144784 - 144909 211 ## PROTEIN SUPPORTED gi|225075655|ref|ZP_03718854.1| hypothetical protein NEIFLAOT_00671 130 83 Op 2 . - CDS 144909 - 145184 493 ## PROTEIN SUPPORTED gi|241759775|ref|ZP_04757875.1| ribosomal protein L31 - Prom 145208 - 145267 6.3 + Prom 145170 - 145229 6.2 131 84 Tu 1 . + CDS 145359 - 146852 1406 ## COG0168 Trk-type K+ transport systems, membrane components + Term 146865 - 146902 6.2 - Term 146842 - 146897 3.8 132 85 Tu 1 . - CDS 146907 - 147770 1344 ## COG1210 UDP-glucose pyrophosphorylase - Prom 147828 - 147887 5.9 - Term 147830 - 147864 -0.1 133 86 Tu 1 . - CDS 147890 - 150358 3001 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Prom 150431 - 150490 4.9 + Prom 150222 - 150281 1.7 134 87 Tu 1 . + CDS 150417 - 150572 142 ## - Term 150442 - 150480 6.1 135 88 Tu 1 . - CDS 150498 - 151766 1849 ## NMCC_0620 hypothetical protein - Prom 151870 - 151929 8.2 136 89 Tu 1 . - CDS 151944 - 152510 403 ## COG3023 Negative regulator of beta-lactamase expression - Prom 152611 - 152670 3.7 + Prom 152538 - 152597 4.2 137 90 Op 1 10/0.053 + CDS 152626 - 153621 1222 ## COG1559 Predicted periplasmic solute-binding protein + Term 153630 - 153680 0.6 138 90 Op 2 2/0.316 + CDS 153689 - 154315 870 ## COG0125 Thymidylate kinase + Term 154516 - 154550 4.6 + Prom 154409 - 154468 4.2 139 91 Tu 1 . + CDS 154579 - 155859 1741 ## COG0281 Malic enzyme + Term 155881 - 155932 15.2 - Term 156096 - 156145 14.6 140 92 Op 1 2/0.316 - CDS 156160 - 157503 1520 ## COG1012 NAD-dependent aldehyde dehydrogenases 141 92 Op 2 . - CDS 157583 - 158242 969 ## COG2095 Multiple antibiotic transporter 142 92 Op 3 19/0.000 - CDS 158244 - 159392 1334 ## COG0772 Bacterial cell division membrane protein 143 92 Op 4 3/0.088 - CDS 159385 - 161433 2450 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 144 92 Op 5 19/0.000 - CDS 161438 - 161938 486 ## COG2891 Cell shape-determining protein 145 92 Op 6 22/0.000 - CDS 161943 - 162785 1048 ## COG1792 Cell shape-determining protein 146 92 Op 7 . - CDS 162797 - 163834 1160 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 164005 - 164064 4.9 + Prom 163932 - 163991 5.4 147 93 Op 1 31/0.000 + CDS 164059 - 164349 526 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit + Term 164392 - 164436 10.8 + Prom 164421 - 164480 3.9 148 93 Op 2 2/0.316 + CDS 164561 - 166009 466 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 149 93 Op 3 . + CDS 166025 - 166900 579 ## COG2990 Uncharacterized protein conserved in bacteria 150 93 Op 4 . + CDS 166929 - 167549 706 ## COG2860 Predicted membrane protein 151 94 Op 1 2/0.316 + CDS 167651 - 169081 2205 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 169093 - 169138 10.5 152 94 Op 2 . + CDS 169161 - 170165 814 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases + Term 170236 - 170275 6.1 - Term 170228 - 170259 1.0 153 95 Tu 1 . - CDS 170431 - 170637 91 ## gi|288576054|ref|ZP_06394140.1| hypothetical protein NEIMUCOT_05597 + Prom 170289 - 170348 5.1 154 96 Op 1 . + CDS 170590 - 170766 268 ## gi|255067163|ref|ZP_05319018.1| transposase + Prom 170946 - 171005 2.4 155 96 Op 2 . + CDS 171029 - 171565 529 ## COG2801 Transposase and inactivated derivatives + Term 171604 - 171648 14.8 - Term 171596 - 171632 8.9 156 97 Tu 1 . - CDS 171651 - 173759 2624 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 173797 - 173856 3.8 + Prom 173734 - 173793 6.3 157 98 Op 1 2/0.316 + CDS 173931 - 174575 390 ## COG0500 SAM-dependent methyltransferases 158 98 Op 2 3/0.088 + CDS 174619 - 175446 582 ## COG0266 Formamidopyrimidine-DNA glycosylase 159 98 Op 3 . + CDS 175511 - 176296 672 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 176359 - 176396 -0.2 + Prom 176342 - 176401 5.8 160 99 Tu 1 . + CDS 176485 - 177222 1144 ## COG0678 Peroxiredoxin + Term 177272 - 177335 5.3 + Prom 177285 - 177344 6.3 161 100 Tu 1 . + CDS 177476 - 178882 340 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 178896 - 178952 12.4 + Prom 178892 - 178951 2.8 162 101 Op 1 . + CDS 179017 - 179247 341 ## NGK_2000 hypothetical protein 163 101 Op 2 . + CDS 179228 - 180589 574 ## COG2946 Putative phage replication protein RstA 164 101 Op 3 . + CDS 180582 - 180893 361 ## NGK_1998 putative phage associated protein 165 101 Op 4 . + CDS 180907 - 181110 264 ## NGK_1997 putative phage associated protein 166 101 Op 5 . + CDS 181197 - 181415 367 ## NMC0953 putative integral membrane protein + Term 181428 - 181470 6.2 167 102 Tu 1 . + CDS 181483 - 181761 209 ## NMA0778 hypothetical protein + Term 181802 - 181833 -0.9 + Prom 181796 - 181855 3.2 168 103 Tu 1 . + CDS 181883 - 182188 159 ## gi|241759865|ref|ZP_04757965.1| hypothetical protein NEIFL0001_0676 + Prom 182205 - 182264 4.0 169 104 Op 1 . + CDS 182297 - 183685 686 ## NMB1747 putative TspB protein 170 104 Op 2 . + CDS 183689 - 183985 287 ## NMB1748 hypothetical protein 171 104 Op 3 . + CDS 183982 - 185145 587 ## NMB1749 hypothetical protein + Term 185208 - 185240 1.0 + Prom 185522 - 185581 3.0 172 105 Tu 1 . + CDS 185605 - 186399 -94 ## COG3547 Transposase and inactivated derivatives + Term 186415 - 186458 4.1 - Term 186405 - 186440 5.1 173 106 Tu 1 . - CDS 186560 - 187690 1324 ## COG5008 Tfp pilus assembly protein, ATPase PilU - Prom 187726 - 187785 6.6 + Prom 187682 - 187741 7.0 174 107 Tu 1 . + CDS 187894 - 188595 690 ## COG0775 Nucleoside phosphorylase + Term 188610 - 188656 3.2 + Prom 188599 - 188658 3.1 175 108 Op 1 14/0.018 + CDS 188728 - 190521 2512 ## COG0481 Membrane GTPase LepA 176 108 Op 2 . + CDS 190521 - 191540 1110 ## COG0681 Signal peptidase I + Term 191550 - 191605 13.2 - Term 191544 - 191583 9.1 177 109 Tu 1 . - CDS 191593 - 192471 948 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 192523 - 192582 3.7 + Prom 192594 - 192653 4.2 178 110 Op 1 . + CDS 192709 - 193248 539 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 179 110 Op 2 . + CDS 193263 - 193862 766 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Prom 193867 - 193926 3.2 180 111 Op 1 . + CDS 193951 - 194730 850 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 181 111 Op 2 . + CDS 194746 - 195411 901 ## PM1667 hypothetical protein 182 111 Op 3 . + CDS 195414 - 196142 611 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 183 111 Op 4 . + CDS 196206 - 196565 521 ## NMC0646 hypothetical protein 184 111 Op 5 . + CDS 196639 - 197022 347 ## NMCC_0653 transcriptional regulator + Term 197025 - 197053 -0.2 185 111 Op 6 . + CDS 197061 - 198344 1229 ## COG0285 Folylpolyglutamate synthase 186 111 Op 7 . + CDS 198358 - 199506 1455 ## NGK_0408 Tpc + Term 199558 - 199589 0.2 187 111 Op 8 18/0.000 + CDS 199598 - 200032 364 ## COG1286 Uncharacterized membrane protein, required for colicin V production + Term 200037 - 200086 15.2 + Prom 200090 - 200149 5.7 188 112 Op 1 2/0.316 + CDS 200185 - 201735 2071 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Term 201753 - 201802 13.1 189 112 Op 2 . + CDS 201810 - 202301 679 ## COG0782 Transcription elongation factor + Term 202327 - 202385 6.4 - Term 202317 - 202370 11.3 190 113 Tu 1 . - CDS 202389 - 203000 938 ## COG0344 Predicted membrane protein - Prom 203025 - 203084 6.0 + Prom 202969 - 203028 6.8 191 114 Op 1 . + CDS 203058 - 203408 473 ## COG1539 Dihydroneopterin aldolase 192 114 Op 2 . + CDS 203455 - 204102 228 ## MS2110 hypothetical protein + Prom 204109 - 204168 4.1 193 114 Op 3 . + CDS 204188 - 204724 864 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 204794 - 204850 16.6 - Term 204787 - 204833 13.1 194 115 Op 1 2/0.316 - CDS 204854 - 205492 1048 ## COG2945 Predicted hydrolase of the alpha/beta superfamily 195 115 Op 2 . - CDS 205534 - 206328 1055 ## COG0421 Spermidine synthase - Prom 206561 - 206620 79.3 + TRNA 206544 - 206619 92.9 # Thr TGT 0 0 + TRNA 206656 - 206731 92.9 # Thr TGT 0 0 196 116 Op 1 19/0.000 + CDS 206860 - 207651 909 ## COG0413 Ketopantoate hydroxymethyltransferase + Term 207663 - 207702 10.0 + Prom 207667 - 207726 3.4 197 116 Op 2 . + CDS 207771 - 208607 1170 ## COG0414 Panthothenate synthetase + Term 208626 - 208669 10.0 + Prom 208615 - 208674 4.5 198 117 Op 1 . + CDS 208697 - 211297 3362 ## COG0249 Mismatch repair ATPase (MutS family) 199 117 Op 2 . + CDS 211335 - 212186 618 ## Pnuc_1803 hypothetical protein + Term 212192 - 212227 7.4 - Term 212180 - 212215 7.4 200 118 Tu 1 . - CDS 212230 - 213060 1138 ## COG5266 ABC-type Co2+ transport system, periplasmic component - Prom 213132 - 213191 13.5 201 119 Op 1 . + CDS 213442 - 214497 1421 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 214510 - 214549 9.1 202 119 Op 2 . + CDS 214575 - 215633 1000 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Term 215717 - 215755 10.2 - Term 215705 - 215743 10.2 203 120 Op 1 . - CDS 215771 - 217936 1971 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 204 120 Op 2 . - CDS 217741 - 219426 1328 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) - Prom 219451 - 219510 4.7 205 121 Tu 1 . - CDS 219849 - 220340 519 ## gi|241759741|ref|ZP_04757841.1| hypothetical protein NEIFL0001_0718 206 122 Op 1 . - CDS 220471 - 220671 210 ## gi|241759808|ref|ZP_04757908.1| conserved hypothetical protein 207 122 Op 2 . - CDS 220705 - 221043 329 ## CGSHiGG_04715 hypothetical protein 208 122 Op 3 . - CDS 221046 - 221372 406 ## Psyc_0442 hypothetical protein - Prom 221397 - 221456 1.8 + Prom 221086 - 221145 3.6 209 123 Op 1 . + CDS 221387 - 222739 407 ## COG5410 Uncharacterized protein conserved in bacteria 210 123 Op 2 . + CDS 222736 - 223395 235 ## NGK_1439 putative phage associated protein + Term 223534 - 223567 5.2 + Prom 223587 - 223646 4.7 211 124 Tu 1 . + CDS 223682 - 224488 643 ## COG2801 Transposase and inactivated derivatives + Prom 224732 - 224791 5.4 212 125 Tu 1 . + CDS 224814 - 225530 574 ## COG2932 Predicted transcriptional regulator 213 126 Tu 1 . - CDS 225553 - 225666 56 ## - Prom 225763 - 225822 2.0 214 127 Op 1 . + CDS 225608 - 225904 320 ## NGK_1457 hypothetical protein 215 127 Op 2 . + CDS 225936 - 226166 223 ## NGK_1457 hypothetical protein 216 128 Tu 1 . + CDS 226325 - 227140 655 ## NGK_1458 putative phage associated protein + Term 227251 - 227288 0.3 217 129 Tu 1 . + CDS 227575 - 228051 22 ## NGK_0656 putative phage associated protein + Term 228061 - 228092 3.4 - Term 228049 - 228080 3.4 218 130 Tu 1 . - CDS 228106 - 229014 1501 ## COG2837 Predicted iron-dependent peroxidase - Prom 229048 - 229107 5.4 + Prom 228980 - 229039 3.4 219 131 Tu 1 . + CDS 229118 - 230206 981 ## COG1408 Predicted phosphohydrolases + Term 230226 - 230262 8.0 + Prom 230240 - 230299 4.6 220 132 Tu 1 . + CDS 230347 - 230937 586 ## gi|241759747|ref|ZP_04757847.1| hypothetical protein NEIFL0001_0734 + Term 230974 - 231015 11.3 - Term 230956 - 231008 17.1 221 133 Op 1 2/0.316 - CDS 231046 - 232158 1430 ## COG2755 Lysophospholipase L1 and related esterases 222 133 Op 2 4/0.070 - CDS 232155 - 233183 1232 ## COG2845 Uncharacterized protein conserved in bacteria 223 133 Op 3 . - CDS 233194 - 234618 2018 ## COG1696 Predicted membrane protein involved in D-alanine export 224 133 Op 4 . - CDS 234665 - 235303 747 ## COG0586 Uncharacterized membrane-associated protein - Prom 235327 - 235386 4.9 225 134 Tu 1 . - CDS 235423 - 235638 137 ## gi|241759742|ref|ZP_04757842.1| hypothetical protein NEIFL0001_0739 - Prom 235842 - 235901 1.9 + Prom 235449 - 235508 3.8 226 135 Op 1 3/0.088 + CDS 235534 - 236202 702 ## COG0593 ATPase involved in DNA replication initiation 227 135 Op 2 . + CDS 236199 - 236867 874 ## COG0560 Phosphoserine phosphatase 228 136 Op 1 . + CDS 237054 - 237242 209 ## gi|261380272|ref|ZP_05984845.1| TonB domain protein 229 136 Op 2 . + CDS 237318 - 237863 172 ## COG1573 Uracil-DNA glycosylase + Term 237993 - 238039 10.5 + Prom 237929 - 237988 5.6 230 137 Tu 1 . + CDS 238120 - 238905 961 ## COG3568 Metal-dependent hydrolase + Term 238982 - 239023 12.0 - Term 239482 - 239529 3.8 231 138 Op 1 2/0.316 - CDS 239544 - 240758 1795 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 240782 - 240841 2.7 232 138 Op 2 . - CDS 240844 - 241059 477 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Prom 241081 - 241140 5.7 + Prom 241026 - 241085 6.7 233 139 Tu 1 . + CDS 241225 - 241824 731 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component + Term 241841 - 241876 7.4 - Term 241829 - 241864 7.4 234 140 Op 1 4/0.070 - CDS 241884 - 242444 859 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 235 140 Op 2 . - CDS 242487 - 243644 937 ## COG4394 Uncharacterized protein conserved in bacteria 236 140 Op 3 . - CDS 243676 - 243954 449 ## NMCC_0878 membrane protein - Prom 243975 - 244034 8.1 + Prom 243971 - 244030 5.3 237 141 Tu 1 . + CDS 244057 - 244845 1093 ## COG0171 NAD synthase + Term 244856 - 244917 20.1 - Term 244849 - 244899 14.2 238 142 Tu 1 . - CDS 244914 - 245114 269 ## NMO_0837 hypothetical protein - Prom 245187 - 245246 6.9 239 143 Op 1 8/0.053 + CDS 245231 - 246370 1471 ## COG2021 Homoserine acetyltransferase 240 143 Op 2 . + CDS 246367 - 246948 691 ## COG0500 SAM-dependent methyltransferases + Term 246970 - 247034 5.2 - Term 246956 - 247020 5.2 241 144 Op 1 . - CDS 247044 - 247454 651 ## COG0394 Protein-tyrosine-phosphatase - Prom 247485 - 247544 2.4 242 144 Op 2 . - CDS 247595 - 248695 1320 ## NMB1269 hypothetical protein - Prom 248723 - 248782 6.5 + Prom 248744 - 248803 5.2 243 145 Tu 1 . + CDS 248901 - 249314 244 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase + Term 249329 - 249373 10.4 - Term 249322 - 249357 7.4 244 146 Op 1 3/0.088 - CDS 249366 - 250115 896 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 245 146 Op 2 . - CDS 250175 - 250930 1062 ## COG3176 Putative hemolysin - Prom 251141 - 251200 7.9 + Prom 251115 - 251174 10.8 246 147 Op 1 . + CDS 251239 - 252570 1182 ## COG5295 Autotransporter adhesin + Term 252577 - 252619 9.4 + Prom 252585 - 252644 5.3 247 147 Op 2 . + CDS 252664 - 253596 855 ## COG0679 Predicted permeases + Term 253602 - 253660 15.1 + Prom 253628 - 253687 5.9 248 148 Tu 1 . + CDS 253779 - 254252 811 ## COG2846 Regulator of cell morphogenesis and NO signaling + Term 254267 - 254307 8.2 + Prom 254284 - 254343 3.1 249 149 Tu 1 . + CDS 254410 - 255135 611 ## Asuc_0744 hypothetical protein + Term 255146 - 255182 8.0 - Term 255134 - 255168 7.6 250 150 Tu 1 . - CDS 255177 - 256142 1081 ## COG0042 tRNA-dihydrouridine synthase - Prom 256169 - 256228 6.7 + Prom 256149 - 256208 4.2 251 151 Tu 1 . + CDS 256229 - 257800 1311 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 257824 - 257865 10.4 + Prom 257911 - 257970 9.5 252 152 Tu 1 . + CDS 258023 - 259351 1714 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 259368 - 259408 11.5 - Term 259356 - 259396 11.5 253 153 Tu 1 . - CDS 259421 - 259846 605 ## NMCC_1263 hypothetical protein - Prom 259937 - 259996 5.6 + Prom 259947 - 260006 4.6 254 154 Tu 1 . + CDS 260036 - 261499 2473 ## COG0516 IMP dehydrogenase/GMP reductase + Term 261507 - 261557 10.8 255 155 Tu 1 . + CDS 261565 - 261636 88 ## + Prom 261713 - 261772 3.2 256 156 Tu 1 . + CDS 261793 - 262812 711 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 262838 - 262878 5.2 Predicted protein(s) >gi|241319676|gb|ACQV01000022.1| GENE 1 3 - 204 172 67 aa, chain - ## HITS:1 COG:NMB0981 KEGG:ns NR:ns ## COG: NMB0981 COG0560 # Protein_GI_number: 15676873 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 60 191 250 277 99 78.0 1e-21 MENGKLTGRLKERIIDAQAKTDLLREYRERLGLAPWQVVAMGDGANDIPMIREAGFGIAY RAKPKTE >gi|241319676|gb|ACQV01000022.1| GENE 2 271 - 876 559 201 aa, chain + ## HITS:1 COG:NMA1965 KEGG:ns NR:ns ## COG: NMA1965 COG2186 # Protein_GI_number: 15794848 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 201 57 258 260 329 79.0 2e-90 MIAKQVLEARQGDGYYVSVKPQQDFLQSWQDLLGKHTNWETDVFDFSCHVEGCMAALAAE RRTDADLKRIDFWRQKFETACESGNLEHQAEADVSFHQTIADAAHNILFSHLSSSLLKML YQQTRSGIIYIHQTEDPRPTLIAQHRAIFEAVAQAKPAEAAEAAKLHLNYVARRILQDRE YQSRSEHADVLAQNDLKRVDW >gi|241319676|gb|ACQV01000022.1| GENE 3 987 - 2180 1477 397 aa, chain + ## HITS:1 COG:NMB1678 KEGG:ns NR:ns ## COG: NMB1678 COG1448 # Protein_GI_number: 15677526 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 397 1 397 397 708 88.0 0 MYHHVEYYPGDPILSLVETFKRDERPEKVNLSIGIYFDDEGKMPVLESVRRAEAERAAVP RPSPYLPMEGLDTYRSAVQRLLFGKDNLALAEGRVATVQTLGGSGALKVGADFLHRWFPD AKAYVSDPTWDNHKGIFEGAGFEVGTYPYYNPETVGVKFEEMTAFFKTLPENSVLILHPC CQNPTGVDMSQAQWDEVLDIIKTHKLIPFMDIAYQGFGEDLDSDAYAIRKAVEMGLPLFV SNSFSKNLSLYGERVGGLSVVCPNKEEAELVFGQLKFTVRRIYSSPAAHGAYIASDVMNS DDLRALWENEVYAMRDRIRAMRQKLYDVLTAKIPNRDFSYFIKQRGMFSYTGLTVEQVHR LRDEFAVYLLDSGRMCVAGLNASNIDYVAEAFAKVLQ >gi|241319676|gb|ACQV01000022.1| GENE 4 2633 - 3490 1427 285 aa, chain + ## HITS:1 COG:NMA1936 KEGG:ns NR:ns ## COG: NMA1936 COG3245 # Protein_GI_number: 15794819 # Func_class: C Energy production and conversion # Function: Cytochrome c5 # Organism: Neisseria meningitidis Z2491 # 1 285 1 279 279 409 80.0 1e-114 MKQLRDHKAQGSALFTLVSGIVIVIAVIFFLIKLAGSGSFGDVNETTEAATQTRIQPVGQ LKLGDGIPVGERQGDQIFNKICIQCHAADSIVPNAPKFENKGDWAPRIAQGFDTLFQHAL NGFNAMPAKGGAADLTDQELKRVITYMANKAGGTFPDPDAAAPADAAASGEAASAPAAEG AAPADAPKADAAKAEDKGAAAGGADGKKVYEASCQACHGGAVPGIPHVGKKEDWAPRIKQ GKDTLHKHAIEGFNAMPAKGGNGSLSDDEVKAAVDYMANQSGAKF >gi|241319676|gb|ACQV01000022.1| GENE 5 3690 - 5027 1915 445 aa, chain + ## HITS:1 COG:NMA1949 KEGG:ns NR:ns ## COG: NMA1949 COG1109 # Protein_GI_number: 15794832 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Neisseria meningitidis Z2491 # 1 441 1 441 444 810 92.0 0 MAKKYFGTDGVRGEVGQFPINPDFVLKLGYAAGQVLVQHEGEIKPTVLIGKDTRISGYML EAALIAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMISASHNVYSDNGIKFFAEGG VKLSDEIELEIEAKIDEEMKAQPSGRLGRARRINGADDRYIEFCKSTFPSHLDLRGLKLV VDTANGAGYAVAPKVFHELGAQVVSIGDEPNGYNINEKCGATHPKALQAAVLQNEADYGI ALDGDGDRLMMVDRNGKVYDGDSLIYVIAKARAHEGVEIGGVVGTVMTNMAMEIALKEQG VDFCRAKVGDRYVLEQLHQRGWLIGGEASGHILCMDKHNTGDGIISALQVLAALQTLNQD LATVCADWQPYPQTMINVRIKKGQNWQDASKEALAEVEKELEGKGRVVLRASGTEPVVRV MVEAKQADWAKKGAEKIAAAIQGQK >gi|241319676|gb|ACQV01000022.1| GENE 6 5104 - 5724 978 206 aa, chain - ## HITS:1 COG:NMB0622 KEGG:ns NR:ns ## COG: NMB0622 COG2834 # Protein_GI_number: 15676525 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Neisseria meningitidis MC58 # 1 206 2 207 207 325 83.0 4e-89 MKTTRLFTLTAATLLSSAIGFAQAGAVDALKKFNNDADGISGNFSQTVHSKKKTQTTHGT FKILRPGLFKWEYTKPYKQTIVGDGKTIWLYDVDLAQVTKSSQDQTIGDSPAAILSNKTA LDSSYTLKEDGSANGIDYVLATPKKNNAGYQYIRIGFKGDNLAAMQLKDSFGNQTSISFS GLNTKPNLSSGMFKFTPPKGVDVLSN >gi|241319676|gb|ACQV01000022.1| GENE 7 6014 - 6844 883 276 aa, chain + ## HITS:1 COG:NMB0621 KEGG:ns NR:ns ## COG: NMB0621 COG2833 # Protein_GI_number: 15676524 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 6 276 6 275 275 446 81.0 1e-125 MYLNPYPLLEQALLSDNPDEKGRLTQTLFAQLGEAEGLTVDESKPVDCRFAGHPLRPRLV APSEVTPRKMNTVEGYAAMLHAIAHIEFNAINLALDAAYRFRNMPFQFVRDWVRVAKEEV FHFGLMRGRLNSLGYDYGDFEAHGHLWDMAYKTAYDPLLRMALVPRVLEARGLDVTPGIR AKVAQRGDMETCDVLDIIYRDEVGHVAIGNHWYQHLCRERGLEPVALFRSLIARYDMFIF RGYVNIEARERAGFSRFELDMLEDFEKSLKQDKKAV >gi|241319676|gb|ACQV01000022.1| GENE 8 6861 - 7805 994 314 aa, chain + ## HITS:1 COG:BS_czcD KEGG:ns NR:ns ## COG: BS_czcD COG1230 # Protein_GI_number: 16079718 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Bacillus subtilis # 9 314 3 311 311 338 55.0 1e-92 MAHHHDHSHAHTHTANKQVLRISFFVIAGFMLVEAVGGWLTNSLALLSDAGHMFSDAFSL GVALWAFKLGEKQTTLQKTFGYKRFEILTAMFNGLSLVLIAAMIFYEAVKRLFYPPEILM GGMLVVSIIGLLVNIGVAVYMLKNSDTEENVNMRGAYLHVISDLFGSIGAIVAAVLMMAY GWQWADTVASVLVAALVGRSGWKLFKQTLHILMEGAPENIHTDELLSVIRNTEGVKSVHD LHVWTITSNIHVLSCHIVVNGNMTVAESEQIAYRIEHELAHHNIGHCTIQIESEQHPHKD EVLCSQEMHEHHHH >gi|241319676|gb|ACQV01000022.1| GENE 9 7875 - 8525 813 216 aa, chain + ## HITS:1 COG:NMB0620 KEGG:ns NR:ns ## COG: NMB0620 COG0546 # Protein_GI_number: 15676523 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis MC58 # 1 215 1 215 220 339 75.0 2e-93 MTQAVLFDLDGTLADTALDLGGALNTVLRRHGLPEKSMDEIRPQASHGASGLFKLGAGIT PDHPDYMQWRKEFLDEYSRCYADQTILFDGVNEMLEALVQHGIQWGIITNKPMRFTDVLV PKLGFTVPPAVIVSGDTCDEPKPSVKPMFYACEQIGVEAQRCFYVGDAERDMQAGKNAGM TTVLADWGYISAEDQTENWLADFRIATPLDLLAILR >gi|241319676|gb|ACQV01000022.1| GENE 10 8625 - 9818 1947 397 aa, chain + ## HITS:1 COG:NMA0719 KEGG:ns NR:ns ## COG: NMA0719 COG1448 # Protein_GI_number: 15793696 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 397 1 397 397 801 98.0 0 MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGATPIVKAVKEAEKRLLES ETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSLGGTGALRIAAEFAKRQLN AQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDWDGMIEDLSQAQKGDIVLLHG CCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGFGNGLEEDAYGLRTFLKYNKELL IASSYSKNFGMYNERVGAFTLVAEDEATAARAHSQVKTIIRTLYSNPASHGANTIALVLK NDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKGASQDFDFIIEQNGMFSFSGLTPEQVD RLKNEFAIYAVRSGRINVAGITDDNIDYLCESIVKVL >gi|241319676|gb|ACQV01000022.1| GENE 11 9883 - 10296 352 137 aa, chain - ## HITS:1 COG:NMA0712 KEGG:ns NR:ns ## COG: NMA0712 COG1238 # Protein_GI_number: 15793690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 5 137 5 137 137 150 65.0 5e-37 MSLLYAYLALIASAFTSATLLPGTSEAAYAAFVSQYPQHTLGACLCASLANGLGSMVSYY MGRMFPAKKRPSEKVLARIQRWGIWPLLFAWLPIIGDALPLAAGWLRLNALHCTIILITG KLLRYAMIYWGMNAVAG >gi|241319676|gb|ACQV01000022.1| GENE 12 10636 - 11793 1317 385 aa, chain + ## HITS:1 COG:NMB0535 KEGG:ns NR:ns ## COG: NMB0535 COG0738 # Protein_GI_number: 15676441 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Neisseria meningitidis MC58 # 1 385 42 426 426 609 88.0 1e-174 MGFITCMNDILIPHLKDIFELTYVQAMLIQFCFFTAYAIMSIPMGYLVGKIGYKNGVIGG FLLTAIGCLLFYPAAGSHSYSTFLGALFILASGVTLLQVAGNPYVTLLSKPGKESATLTL VQAFNSLGTTIAPQIGAFLILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRL PDARKIAEEESEHNHDGKHSVWQYRHLVFGAAGIFCYVGAEVSIGSLLVNVLGYLKGMDH SSAAKYLSFYWGGAMVGRFLGSAIMAKIAPNRYLAFNATAAVALLGVAMLAGKASADVAM WALLAIGFFNSIMFPTIFSLATKGLGRFTSSASGVLCTAIVGGAIVPVVQGWAADTYGLM ISFVVSAICYVYIVFFAIKGYKADE >gi|241319676|gb|ACQV01000022.1| GENE 13 11886 - 12509 616 207 aa, chain + ## HITS:1 COG:VCA0092 KEGG:ns NR:ns ## COG: VCA0092 COG1075 # Protein_GI_number: 15600863 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Vibrio cholerae # 3 207 2 205 209 92 32.0 6e-19 MAKIILLHGLHMHSWVMRPLAYLLEQEGFEVALFDYCSVLHSMNRHVEDLARWIDENHTD ETLHFVGHSLGGLVLRNFAAAYPDKVSGRIVTMGTPHQGSRAAQRVFNMGLQKPVLGGSY KGALDGGMPELPEGVELGSIAGNKPYGLGRVLGLHGEHDGTVLVSETHCPNMRDHVVLPV SHSGMLFNRKTVEQVVAFLHDGCFKKQ >gi|241319676|gb|ACQV01000022.1| GENE 14 12690 - 14069 1845 459 aa, chain + ## HITS:1 COG:NMB0536 KEGG:ns NR:ns ## COG: NMB0536 COG1757 # Protein_GI_number: 15676442 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis MC58 # 1 459 1 459 459 740 90.0 0 MFAFKSLLNMPRFEAIAVALALVAAMGYTIISLEWLPHMSIVTAIVVLLLYGLMRGLKYH DMQNGMIGAVGQGMGAIYLFFFIGLMVSALMMSGAIPTLMYYGFGLISPTYFYFSAFALC SIIGISIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIVSGAFFGDKMSPLSDTTGISA SIVGIDLFEHIKNMMYTTVPAWLISAALMLWLLPNVAAHDMNSVEAFRAQLEATGLVHAY SLIPFALLVVLALMRVNAIVAMLFTVIVALIVTYFHSTPDLKQLGAWFYSGYKLEGEAFK DIARLISRGGLESMFFTQTIVILGMSLGGLLFSIGVIPSLLEAIRAFLTNTGRATFSVAM TSVGVNFLIGEQYLSILLSGETFKPVYDKLGLHSRNLARTLEDAGTVINPLVPWSVCGVF ISHALGVPVWEYLPYAFFCYLSLALTLVFGWTGLTLSKK >gi|241319676|gb|ACQV01000022.1| GENE 15 14207 - 14836 738 209 aa, chain + ## HITS:1 COG:NMB0533 KEGG:ns NR:ns ## COG: NMB0533 COG0177 # Protein_GI_number: 15676439 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Neisseria meningitidis MC58 # 1 208 1 208 209 416 95.0 1e-116 MNKQIRQEIFERFRAANPHPTTELNFSSPFELLIAVLLSAQATDVGVNKATAKLFPVANT PQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNGEVPADREALESLPGVGRK TANVVLNTAFGQPVMAVDTHIFRVSNRTKIAPGKDVREVEDKLMRFIPKEFLMDAHHWLI LHGRYTCKALKPQCSKCLINDLCEYPAKM >gi|241319676|gb|ACQV01000022.1| GENE 16 14893 - 18501 5446 1202 aa, chain - ## HITS:1 COG:NMA2084_2 KEGG:ns NR:ns ## COG: NMA2084_2 COG4230 # Protein_GI_number: 15794959 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 439 1202 1 764 764 1326 88.0 0 MFNFAFPTQTPLRQAVTDAYRRDEIEAVQDMLQRAQMTDEERNAASELARRLVTQVRSSR TKASGVDALMHEFSLSSEEGVALMCLAEALLRIPDNATRDRLIADKISEGNWKSHLNNSP SLFVNAAAWGLLITGKLTTNTSEKNMGSALSRIISKGGAPLIRQGVNYAMRLLGKQFVTG QTIEEALQNGKEREKMGYRFSFDMLGEAAYTEEDANRYYNDYVQAIHAIGKDAAGQGVYE GNGISVKLSAIHPRYSRAQHERVMSELLPRLKELFLLGKKYDIGINIDAEEANRLELSLD LMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYLIDLARRNNQKLMIRLVKGAYWDSEV KWAQVDGMEGYPTYTRKVHTDISYLACARKLLDAQDAVFPQFATHNAYTLGAIYQMGKGK DFEHQCLHGMGETLYDQVVGPQNLGRRVRVYAPVGTHETLLAYLVRRLLENGANSSFVNQ IVDENISIDRLIKSPFDTIAEQGIHLHPALPLPRDLYGKDRLNSQGVDFSNETVLQNLQE KLNQASSEDFHAASIVNGEARNVGEAQPVRNPADHNDVVGTVSFADAALAQEAIGAAVAA LPEWSAKPASERADCLRRFADLLEQHTPALMMLAVREAGKTLNNAVAEVREAVDFCRYYA NEAENTLPKDAKAVGAIVAISPWNFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIATYAI SLMHQAGIPTSALQLVLGAGDVGSALTGDARIGGVIFTGSTEVARLINKALSKRDDNPVL IAETGGQNAMIVDSTALPEQVCLDVLNSAFDSAGQRCSALRILCVQEDVADKMINIIKGA MDELVVGKPTQLTTDIGPVIDAEAQQNLLAHINRMKGVAKAYHEIKTAADVDSNNSTFVR PILFELNNLNELQREVFGPVLHVVRYRASELDQLIDQINAKGYALTSGVHSRIEGTVDHI RDRIEAGNIYVNRNIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQRLVRTPEWVAPTLSRI GQADEDALKRLETLVHKLPFNAEEKKTAAAALGHARVRTLRKAETVLVGPTGERNSLSWR SPKRVWVHGGNLLQAFSALTELAAAGIQTVVEPNSPLVAYSADLDGLLQVNSKPENAGIS HVAAIEPLSSERKQELAGHDGALIRILPSEQGLDILQVFEEISCSINTTAAGGNASLMAV AD >gi|241319676|gb|ACQV01000022.1| GENE 17 18726 - 20252 2098 508 aa, chain - ## HITS:1 COG:NMA2083 KEGG:ns NR:ns ## COG: NMA2083 COG0591 # Protein_GI_number: 15794958 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Neisseria meningitidis Z2491 # 1 508 1 508 508 826 90.0 0 MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVTAMSAGASDMSGWLLMG LPGAIYLSGLNEAWIAIGLIVGAYLNWLLVAGRLRVHTEYANNALTLPDYFFHRFGAGGH LMKVVSALIILFFFTIYCASGIVAGATLFQSLFHDLSYTQAMWLGAGATIAYTFLGGFLA VSWTDTLQASLMIFALVLTPIMVYLGLGGADQMNAAIQQVAASTGKEYGSLFAGTTFIGI ISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIGMTWMILCMAGAVAVGYFGIAYFGA NPAHVEEMNGNHERIFIALATLLFNPWIAGIILSAILAAVMSTLSCQLLVCSSAITEDFY KGFLRKNAQQAELVWIGRVMVLAIAVISILIASDPESKVLGLVAYAWAGFGAAFGPVVIL SVLWKRITAYGALSGMIAGALTVVVWAEWIKKPALAAQETGFSTVYEIVPGFIACTLVIV LVSLIDKKPSRELQERFEKADAEYRASK >gi|241319676|gb|ACQV01000022.1| GENE 18 20708 - 21502 1065 264 aa, chain - ## HITS:1 COG:lin0912 KEGG:ns NR:ns ## COG: lin0912 COG2116 # Protein_GI_number: 16799984 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 8 255 6 252 270 240 52.0 2e-63 MDTRDLYPHEILQEAIGKSCAKSEFSIKMLVILSFLGGGYVGFGYLACLRVISGIPAEWN GLAALLGASVFPIALICILIGGGELATGNMMIMALGRLTGRVSTYKLVRNWLIVSLGNLA GAVAMAYFLGHYVGLAEGATAAKTIAIAEAKVNMDFGRAFVSAIACNWMVCMGIWFYFGS RHTSGRILATWFPVMIFVLIGFQHFVANMFIIPAGIWAGANVSWGQFFYNMIPVFLGNVL GGSSFVAAFYLFAYKHLLKDDFSI >gi|241319676|gb|ACQV01000022.1| GENE 19 21755 - 23968 3202 737 aa, chain - ## HITS:1 COG:NMB1735 KEGG:ns NR:ns ## COG: NMB1735 COG0317 # Protein_GI_number: 15677581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis MC58 # 1 737 1 737 737 1374 89.0 0 MTTIRQTPQTSSATLEGLLAWFDGYVAALPDSDKNLIQTAFDLAKEHYPADALTTYGEPL LEHFLGSMQIVSELDLLPDAVAATILSDIGKYVPTWHELVTERCNSTVCELVKGVDEVQK LTQFARVDSLATPEERGQQAETMRKMLLAMVTDIRVVLIKLAMRTRTLQFLSNVPDNPEK RAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPEKYREIALLLDEKRTERLEYIEN FLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKKLTFDGLFDIRAVRILVDTIPECYT TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTFDMHQFNEFGV AAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKEDLAAAFKTELFNDTIYVLTPH GKVLSLPTGATPIDFAYALHSSVGDRCRGAKVEGQIVPLSTPLENGQRVEIITAKEGNPS VNWLYEGWVKSNRAISKIRAYIRQQNADTVREEGRAQLDKQLSKIFPKPNLQALAEKLGF KKTDELYTAIGQGEVSNRAIHKACGALNEPPPVPIDETNIVKQSKIKKGGKNGILIDGED GLMTTLAKCCKPAPPDDIIGFVTRDRGISVHRNTCPSFRHLAEQSPEKVLNASWAALQEG QVFAVDVEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSRDLEASMRFTLEVRQVNDLPR VLASLGDIKGVLSVTRL >gi|241319676|gb|ACQV01000022.1| GENE 20 24132 - 24767 880 211 aa, chain + ## HITS:1 COG:NMA1990 KEGG:ns NR:ns ## COG: NMA1990 COG2999 # Protein_GI_number: 15794872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Neisseria meningitidis Z2491 # 1 211 1 213 213 323 74.0 1e-88 MKLYIYDHCPFCVRARMIYGLRDVAVEEVVLANDDEATPIGMIGSKQVPILQKEDGSFMG ESLDIVRYIDQGRLKEEVRPEVQAWLDKVGEYNNKLVQPRMVKIGLPEFETDEAKKYFID KKERSIGNFETNLNKTAQYLERLHQDLAELEALVCEGEGLGGEISLEDILTFPILRNLTV VRGIQWPKKLMDYLLTMSERSGVALYFDRAL >gi|241319676|gb|ACQV01000022.1| GENE 21 24824 - 25342 802 172 aa, chain - ## HITS:1 COG:NMA1930 KEGG:ns NR:ns ## COG: NMA1930 COG3009 # Protein_GI_number: 15794813 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 170 1 170 172 213 63.0 1e-55 MRLFPIAAALTLAACGTAQSTQYFVLPDSQYIRPAAHGNEIAVKVNLAEPLANGGLVYQT DAYHVNLAKNHLWAAPLDGALAANFSNKLNRLNPRHTFVPASRSQSSQTLKIYVEAFQGS YQGQTTVSGYALWPDGRSKPFNAVTPQQGDGYTAMLESLENGLSQVADTIAY >gi|241319676|gb|ACQV01000022.1| GENE 22 25342 - 27003 2406 553 aa, chain - ## HITS:1 COG:NMA1929 KEGG:ns NR:ns ## COG: NMA1929 COG3008 # Protein_GI_number: 15794812 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Neisseria meningitidis Z2491 # 1 553 1 553 553 977 92.0 0 MKKHDSSPNYHAPARVKKTNVFTSIVWLIPLIALIAGGWLLVKDIRNRGPVVTLLMDSAE GIEVNNTVIKVLNVDVGRVTRIKLRDDQKGVEVTAQLSADAKDLIRSDTQFWVVKPRIDQ SGVTGLGTLLSGSYIAFTPGKSQETKDVFVVQDIPPIAAIGQSGLRLNLIGKNDRILNVS SPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLINSASRFWLESGINIETTGSGV KLNSAPLPALLSGAISFDSPKTSDSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQ SVRGLSAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQS KEHWKQQFQTALNKGLTATISNNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQG GGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSANAALSSIDKLVGKPQTQ NIPNELNQTLKELRQTLQGVSPQSPIYGDVQNTLQSLDKTLKDVQPVINTLKEKPNALIF NSSSKDPIPKGSR >gi|241319676|gb|ACQV01000022.1| GENE 23 27000 - 28310 900 436 aa, chain - ## HITS:1 COG:NMA1928 KEGG:ns NR:ns ## COG: NMA1928 COG2995 # Protein_GI_number: 15794811 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Neisseria meningitidis Z2491 # 19 433 18 430 434 588 73.0 1e-168 MKRIPAYHRWWRYKSYLPDATLPAHTVECPDCGCRMDIPRLRQGQEAHCPVCNHEIVEVE NNPYIAPIAYALTTLILMAFAYNMVYIRVDLFGVTSILSLPQMMRLLISLDYGFLAEVMF ILTFGAPLLFLLLCLYVYTALIREKAYPALRFATRVLVRLRHWIMVDVFFISTLVAYIKL SSVATVEFGSAFYLMFPLSVMLIRTSVSIPQHWVYYKIHRLTGGHAVQTATEDKICCSRC LYFRNKDEQPCGVCGADLYRRRPKSLSISLAFLMAAFILYFPANILPIMISSNPTALEIN TIFNGIVYMWDDGDRLIAVIIFSASIMVPVLKIIAMAVLIYSAYFKPVMSADKMSVLYRI TESVGRWSMIDIFVIIILMSSFHTNMARVVPGGAAIYFCLVVILTMLSAYYFDPRLIWDK QQQLSDGLDSDQTLTQ >gi|241319676|gb|ACQV01000022.1| GENE 24 28714 - 29337 944 207 aa, chain + ## HITS:1 COG:NMA1927 KEGG:ns NR:ns ## COG: NMA1927 COG3230 # Protein_GI_number: 15794810 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Neisseria meningitidis Z2491 # 2 206 25 229 230 364 90.0 1e-101 MSETQELTFAKRLKEQTTTTHDSVDNLVMSVQPFSSKENYIKFLKLQSVFHKAVDHIYKD AELNKAIPELEYMARYDAVTQDLKDLGEEPYQFDKELPHETGNKAIGWLYCAEGSNLGAA FLFKHAQKLEYTGEFGARHLAPHPNGRGKHWRAFVEHLNALNLTPEAEAEAIQGAREAFA FYKVILRETFGLPEGAEAPEGMTPHRL >gi|241319676|gb|ACQV01000022.1| GENE 25 29458 - 31002 1143 514 aa, chain - ## HITS:1 COG:no KEGG:NGK_2582 NR:ns ## KEGG: NGK_2582 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 66 514 88 538 538 515 58.0 1e-144 MLKIKQKIVSASLCYLLPSAVFAEFPEEGVRQNISSQNTAVQVQQKQWLDILSEEERSPE KNENIGRPTLINDDFLASNPHILEDALVQALNGNSADLVSSLVALYRKQQPNHNPKLIAR ADALLAKLKGRTSEAVERYRTLYESDVSDDRILLDLAAAEFQDYRLGEATMHFRHAAQRD IPAPVLENVKRFQEAVKRQTEWKWSGGISPVHNDNANNAAPRYCIETRGQTACSVTLPVS ANGLNYELNTEKLTPLYGHHAIKFRANLSGTSYFFDRQSAYDDAFGRAYLGWQRKDGKQT VSVLPFYQAQLAGSSEFDSKKENKRRAAPYMLAHGVGVQLSHMVNLSNATQLYYSLERYR QNYRETDRALRNDGWHDSTYLSLARRFGRTTLFGGWQYNRFVPENKSIHNAVNNAAYHRN GFNIGWIQQWQVLGELNSRLTASFANRHYKGIMAFGTEPQHNREHSLSINLSHNKLSYKG ITPTLNYSYSHIRSNAPYAMRNIHQWSLGGEWNF >gi|241319676|gb|ACQV01000022.1| GENE 26 31372 - 32367 1011 331 aa, chain + ## HITS:1 COG:no KEGG:NMC1946 NR:ns ## KEGG: NMC1946 # Name: hpuA # Def: haemoglobin-haptoglobin-utilization protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 26 331 25 341 341 271 51.0 2e-71 MKINVFIVSIATTSILTACAGGGASEPKVPVAIPTAQPIANVKLSDESSAIQTINTLSGK GGSLHEAELEVKTSWGSYTDKQYVYQTPSGNYYNISSYSDPIVPSYSSPSYALRTRHEGQ PLSEGGKLFVCCSSSGQFTNAPATKHDHLKFGAWISSDGTADLFVGGKPVGTAKPSYYTP SDSTVAKGKTTYEVWAVRVRNGNIVTSTYDPGKSSGLSEKNTPKLSLLTANFNTNKLGGT ILGNADYGPDVVMKDVGINGVDFSGTAESDGKNGKVEGKFFGQFNSGYKTEVSIGGKVTF DADKSLDTVFGGVENSSDRNTTDTSLTPVSK >gi|241319676|gb|ACQV01000022.1| GENE 27 32422 - 34839 3151 805 aa, chain + ## HITS:1 COG:NMA0474 KEGG:ns NR:ns ## COG: NMA0474 COG1629 # Protein_GI_number: 15793475 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 1 805 1 810 810 1182 76.0 0 MSFHFKPVLLAAIVSQTFPALAADPIPQAYQELNEVKVIGGRKVQKLGEEKIRRQALDKQ MVSDESDLVRYDPGISVVEGGRSGSNGFTIRGVDKDRVAINVDGLAQAESRSSEAFQELF GAYGNFNANRNTSEPENFSEVTLTKGADSLKSGSGALGGAVNYKTKSASDYVSEEKPYHL GIKGGYIGRNSQKFSSITAAGTWLGLDALMVYTRRFGKETKNNSDAADTVITDNKQSWNP NAGSTNYGSRGVARSKPDPQDWVNKSTLFKLGYNFNDKNRIGWIYEDSRTDRTTTELSNM WAANWKGEALGDTRSRQDISYRKRIGFEYKNQLDQGPWDSLNLRYDRQTIDMSTWTWDLP TDYASNGVNSDVYHMFRNIRQKTAQYSVDTEKQIDFSKSVWAMQYGLGGSKNDNGNSDHS YWVRLYDPKYQTSNNQELTMLVESSSKNRFAYWNNTFQFGDSSQYRLNAGVRYDNSSSKA KDNPNYTPAIRGQIPYLGSERKHSGFSYGLGLDWKFTPHLNLLAKYSTGFRAPTSDETWL LFPHPDFYLKANPNLKAETAKNFELGLAGSGKAGNFKLSGFQTRYRNFIELTYMGVSSDN PNSPNYAPISDGTALVSSPVWQNQNRSSAWVKGLEFNGTWNLDSIGLPQGTHAGVNVSYI KGKAKQTNEQETPINALSPWSAVYNLGYDAPSKRWGINAYLTHTAAKKPSDTVHSSDDLN NPWPFAKHSKAYTLFDLTGYVNLGKYFTVRAGAYNIGNKKYYTWESLRSIREFGTVNRVD NKTHAGIERFSSPGRSYNFTLEAKF >gi|241319676|gb|ACQV01000022.1| GENE 28 35049 - 36659 1684 536 aa, chain - ## HITS:1 COG:NMA0954 KEGG:ns NR:ns ## COG: NMA0954 COG0665 # Protein_GI_number: 15793911 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 533 1 537 539 667 63.0 0 MTCLAWNTTPSLATLCRTIEQHTVPLYLIVCLPENRIPDFPLSNHPSELEGRLNNRLAQA MKCLQFNSVNVLENLLSDVHLWLVPPHRADRLHEHFHHIEWQTEAIPQSAPIPLKPWFRR PEHQAAPEHILIIGAGIAGAATARKLAEHGVRVTVLEAGKAAQAGSGNRQGLLYAKISPH DTEQTELLLTGYGYTRRLLEDLLPDSDVWGGDGVLHLNFDDSERKRNQALGLQHQHKHLY RSVSAEEAASIAGIDVFSDGLYWPQGVWLNPSAVVHTLLNHPLIELHEHAPLTAVSHDGT QWTAHTPDAHFNASHIVYCMGAHSPTAADTNVSALPFRQIRGQTGVVSANPFSQKLRCAI SGESYISPSWQGCHCYGATFVLNSNDETWYPQEETENRTALQQLNPPLAQSLFEQDSFSD GLQNTQGHAALRCDSLDHLPVVGALGDITAMQSAYAKLALDKNYRLDNIPCPYLPNAYIN TAHGTRGLATAPICAAAIAAEILGLPHPLSQRLRTALHPNRAIIRAIVRQQPLLSV >gi|241319676|gb|ACQV01000022.1| GENE 29 36785 - 37375 668 196 aa, chain + ## HITS:1 COG:PA3885 KEGG:ns NR:ns ## COG: PA3885 COG2365 # Protein_GI_number: 15599080 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Pseudomonas aeruginosa # 26 165 31 168 218 97 35.0 2e-20 MRRLLLCLLASGLPIACSSTPPDNGSQAVQSERWATPVKHDANLYRIDDKLYRSEQPVAE DGEAIVKLGIQSVINLRFFDRNDDDYLKAYGLTLLNRPLLSWSIKPKEIAEILYLIEKQQ QNGAVLIHCYHGADRTGLIAGMYRIIYQGWTVEEAKAEMQHGPYGYHSIWKNIANLFTEE KVKQVKTHLEASRKRG >gi|241319676|gb|ACQV01000022.1| GENE 30 37449 - 38267 959 272 aa, chain - ## HITS:1 COG:NMA0742 KEGG:ns NR:ns ## COG: NMA0742 COG1045 # Protein_GI_number: 15793718 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Neisseria meningitidis Z2491 # 1 272 1 272 272 495 89.0 1e-140 MKKDHLNSTDFNLWHTIREETETAAAAEPMLASFLHQTVLRHDSLDSVLAYHLSSKLGSP IMDVRALFEIYQQALSVDTRISKCVEADLKAIYERDPACDEYSLPLLYFKGFHAVQAHRI NHWLYQNGRKTLAYFLQNRMSEVFGVDIHPAARFGHGLMLDHATGFVAGETAVLGNNISI LHGVTLGGSGKESGDRHPKIGDGVMIGANASILGNIRIGENAKIGAGSVVVADVPSSITV VGVPAKPVGRSSKTPSADMDQNIQLSTTDFVI >gi|241319676|gb|ACQV01000022.1| GENE 31 38427 - 38990 863 187 aa, chain + ## HITS:1 COG:NMA0744 KEGG:ns NR:ns ## COG: NMA0744 COG0576 # Protein_GI_number: 15793719 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Neisseria meningitidis Z2491 # 7 186 6 191 192 223 80.0 2e-58 MTDRNEQHQNAAEEAAAVETAEAVETEQAEAQAEPTYEDLQARIAELEGQLKDSELRGLA NEQNLRRRHQQEIADTHKFAGQKFAAEMLPVKDYLEMALLDQSGNFDALKMGVQMTLNEL QKAFDATHIKEINPQAGEKLDPHYHQAMQTVVSEQEPNTIVSVMKKGYTLSDRVLRPAMV VVAKKED >gi|241319676|gb|ACQV01000022.1| GENE 32 39295 - 41223 3334 642 aa, chain + ## HITS:1 COG:NMA0736 KEGG:ns NR:ns ## COG: NMA0736 COG0443 # Protein_GI_number: 15793712 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 642 1 642 642 1041 97.0 0 MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEVLVGAPAKRQAVT NAKNTIYAVKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWVKAQGKELSPPQVSAEVL RKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFG MDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFEVLATNGDTFLGGEDFDQRLIDY IIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQTEINLPYITMDATGPKHLAMK ITRAKFESLVEDLIQRSIEPCKVALKDAGLSTSDIDDVILVGGQSRMPKVQEAVKAFFGK EPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLLLDVTPLSLGIETMGGVMTKLIQKNTTIP TKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLTDIAPAPRGMPQIEVTFDID ANGILHVSAKDKGTGKAANITIQGSSGLSEEEIERMVKDAEANAEEDKKLTELVASRNQA EALIHSVKKSLADYGDKLDAAEKEKIEAALKEAEEAVKGDDKAAIDAKAEALGAASQKLG EMVYAQAQAEAQAGEGAQAESSAKKDDDVVDADFEEVKDDKK >gi|241319676|gb|ACQV01000022.1| GENE 33 41490 - 41708 387 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKLIQMTSLMVAAAGLVLASVASAHGKYEMHPKQERMHKKAKPQKMKKPAPKAKHHATK PKHHQEHRHDHH >gi|241319676|gb|ACQV01000022.1| GENE 34 41782 - 43122 1311 446 aa, chain - ## HITS:1 COG:no KEGG:NMB1645 NR:ns ## KEGG: NMB1645 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 442 1 442 446 595 70.0 1e-168 MLNPSQKLVELVRILEERAYIFPGDPVQATEALRHIDGGNEEKLIRRAQIIDRDQHLKYV LQQVETGSFWLWIVAATLLFTVGFSSTYLLMDNQGLNFFLVLAGILGMNTVMLLVWLATL FLRLKNVHFISSPATWFRGKDPVNQAILRLYVDEWRKPQTRWLIGATSHGLWLCTLSGML VSVLLLLLVRQYTFNWESTLLSNTALVKTVEALSWLPERLGFPVPDSQAVIAGRLNNHIE DARAWAGLLIGSIICYGILPRLLAWLACKITLKTLRERLDLNQPYYQNILRTWQTKIVDA DDFQENIIPVSSKITLNNAPKWAVTLETEWPEPLWFSGVLAQEWIDKGVAAGRKDLEQLE AELKQTPAQLLIGVRTQTVPDRGILRQISRLAEATDGGVIIQLLNQDSFSEDLDTKLDYW RNALAERNIAWLEPTRLAQEKRQTSI >gi|241319676|gb|ACQV01000022.1| GENE 35 43565 - 44197 746 210 aa, chain + ## HITS:1 COG:no KEGG:NMB1253 NR:ns ## KEGG: NMB1253 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 2 210 13 224 225 207 53.0 1e-52 MQGLKLPADEIHVAYLTAQAVIKMGNASVERSILWPSEDGWQLADYVDAEHELLLKQIFM ALDSVAERTEHLKSAAVYTAFPKDGALSLVRLSRWGVPLENMIPIDEQAGQAFLAVRTAQ SGWMNVCQNVAYWQKIGELSGERNHPGLSQISVPVCMPSGAVLGVVHAEFDVKDGVSDEV LVAWIALALALSDSLKNLLGVAENEEAENE >gi|241319676|gb|ACQV01000022.1| GENE 36 44253 - 44783 313 176 aa, chain + ## HITS:1 COG:NMA1425 KEGG:ns NR:ns ## COG: NMA1425 COG0807 # Protein_GI_number: 15794336 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Neisseria meningitidis Z2491 # 1 174 22 195 197 307 85.0 6e-84 MHGFEEEGGQEHVALTMGDVSDGLPVLSRIHSECLTGDALFSVKCDCGPQLQAAMQAVQK EGRGVIVYLRQEGRGIGLINKIRAYRLQDQGLDTVEANVALGLPVDARDFTLAKQIYDYL HIREVRLLTNNPEKIQTLKDSGINVVERIALHVGENVENERYLHTKADKLGHLIFD >gi|241319676|gb|ACQV01000022.1| GENE 37 45289 - 47274 3260 661 aa, chain - ## HITS:1 COG:NMB1682 KEGG:ns NR:ns ## COG: NMB1682 COG0187 # Protein_GI_number: 15677530 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Neisseria meningitidis MC58 # 1 661 1 661 661 1310 97.0 0 MTKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNAADEALGGFATEIDVR IHDDGSLSVHDNGRGIPVGLHPVEGVPVVELVFTRLHAGGKFNKKDGGSAYAFSGGLHGV GVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAEVGKCAVKDSGTEVRVWPDGKYF ESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEAHTQTWHYPDGLKSYLTDLIADA QEAVPLFSCENYISDDHNGDFSIGEGAAFALTWLEEGSCANESYVNLIPTPLGGTHEAGL KQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTAFVLSARVLDPQFQGQTKDKLTNRDAL KLVAAVSGDPLELWLNQNVDFGKKIAELAIRQAQARMRSVKKIEKKKGSGVAVLPGKLTD CESEDIRENELFLVEGDSAGGSAKLARDKATQAILPLRGKVLNSFEVHPDQLFGNAEIHD ISVAIGVDPHGINDNPDLSGLRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLVADGHI YVAQPPLFRVDVNAQGKSKPARKFYALDQNELDSILERLQKEGVKETAYSISRFKGLGEM NPDQLKDTTMHPDTRRLLQVQIPEGADDETHDIFVKLMGKGEAAARRAWMEKEGDTAELD I >gi|241319676|gb|ACQV01000022.1| GENE 38 47343 - 47864 760 173 aa, chain - ## HITS:1 COG:NMA1942 KEGG:ns NR:ns ## COG: NMA1942 COG0494 # Protein_GI_number: 15794825 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis Z2491 # 1 172 1 173 174 292 89.0 2e-79 MLDREGYRPNVGIILINERNEVFWGKRVREHSWQFPQGGIKPGESPETAMYRELYEEVGL LPQHIKIVGRTRDWLRYDVPSHWVRREWRGSYRGQKQIWYLLRLVGRDSDVNLRACHHPE FDGWRWHQYWAPVDEVIDFKRGVYLDALTELSRFLRGIESYEDFIRRNPIENL >gi|241319676|gb|ACQV01000022.1| GENE 39 48208 - 49353 1640 381 aa, chain + ## HITS:1 COG:NMA0831 KEGG:ns NR:ns ## COG: NMA0831 COG0687 # Protein_GI_number: 15793802 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis Z2491 # 1 381 1 379 379 614 80.0 1e-176 MKKSLMAAAILSLVLTACSGGQGTAAESSASQTQTSSSQTDKLNIYNWSDYVDPATLSAF EKNTNINVRYDYYDSNEALEAKLLTGKSGYDLVAPSIANVGRQIKAGAYQKIDKSQIPDY ANIDPDLLKMMETVDPGNEYAVPYFWGINTLAINKQQVQKALGTDKLPENEWDLVFNPEY TQKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPDDIKAAVEMMKKVRPDIKRFTSSGY IDDMAAGNLCVSVGYGGDLNIAKTRAKEAGNGVEVEVLAPKSGVGIWVDSLMIPRDAQNV ANAHKYINHTLNPETAAKNGNYVTYAPASRPARDLMDEKYTSDESIFPSKELMEKSFIVS PKSTDASKLSVRLWQALKAGR >gi|241319676|gb|ACQV01000022.1| GENE 40 49461 - 49733 452 90 aa, chain + ## HITS:1 COG:NMB1653 KEGG:ns NR:ns ## COG: NMB1653 COG3830 # Protein_GI_number: 15677502 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Neisseria meningitidis MC58 # 1 90 1 90 90 144 98.0 5e-35 MNNSVITVIGKDRVGIVYDVSKILAENQINILNISQQLMDDFFTMIILVDTSKCTKSRQE VLDLFAEESKKLALDIRMQNEEIFQAMHRI >gi|241319676|gb|ACQV01000022.1| GENE 41 49749 - 51104 1804 451 aa, chain + ## HITS:1 COG:NMB1652 KEGG:ns NR:ns ## COG: NMB1652 COG2848 # Protein_GI_number: 15677501 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 451 1 451 451 777 98.0 0 MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQNIYNKINTVGKDLVAT AKYLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLDKAAKAIGVSFIGGFSALV QKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINMDAVRLAGETIKRTAEITPEG FGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVSGPGVVKAALENSDATTLTEVAE VVKKTAFKITRVGELIGREASKMLNIPFGILDLSLAPTPAVGDSVARILEEMGLSVCGTH GTTAALALLNDAVKKGGMMASSAVGGLSGAFIPVSEDEGMIAAAEAGVLTLDKLEAMTAV CSVGLDMIAVPGDTPAHTISGIIADEAAIGMINSKTTAVRIIPVTGKTVGNSVEFGGLLG HAPVMPVKEGSCEVFVNRGGRIPAPVQSMKN >gi|241319676|gb|ACQV01000022.1| GENE 42 51154 - 51642 478 162 aa, chain - ## HITS:1 COG:PM0530 KEGG:ns NR:ns ## COG: PM0530 COG0454 # Protein_GI_number: 15602395 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pasteurella multocida # 5 158 2 154 163 124 42.0 5e-29 MPQTVTLVLYDPAHAADLDYRLHGEQAQYSVSPQERLQNGRFAAPDCLAVTILCQNRPIG FFILDKGSDRLTYSANPRAVLLRSMSVNPAYQGQGCARAALADDKLAPLIRSILPDCDEI VFGVHHANRAAIGLYQSCGFADTGRTFMGTKGLQYIYSKTIR >gi|241319676|gb|ACQV01000022.1| GENE 43 51773 - 53302 2570 509 aa, chain - ## HITS:1 COG:PM1435 KEGG:ns NR:ns ## COG: PM1435 COG0433 # Protein_GI_number: 15603300 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pasteurella multocida # 11 505 11 498 499 609 64.0 1e-174 MTTFQIARADGKTLEIQGKMANRHGLIAGATGTGKTVTLRRMAEAFSSEGVPVFLVDVKG DLSGIAQAGANSGKVGERIAEFGLGEQWLQNFPVRFWDVYGETGIPVRVTVSEMGPMLLA RLMNLNDTQEGLLNLVFKVADDRGWHILDLKDLRSMLKHVSDHASEYRTQYGNVSAASIG AIQRQLLTLENEGAEKFFGEPSLNLQDWMQTDNGKGIINILNSEKLMRSPRMYSAFLLWM LAELFETLPEVGDLDKPKFVMFFDEAHLMFDNAANALVEQIEQVVRLIRSKGVGVYFVTQ NPLDLPDTILGQLGNRVQHALRAFTPRDQKAVKAAAETFRSNPNIKVAEAIAELGVGEAL VSFLDEKGMPEPVERALILPPQSALTPLAAEERNRLFQNDDLYPTYKDMVDNYSAFEALA EVDSQAAAEKEAANAAKEQEKAQKAAEKEAANADPGILGGLIGGLSGGRKKSGQGLGYNV ADAIGSQINRQVTNAISRSVMGIIKNMFK >gi|241319676|gb|ACQV01000022.1| GENE 44 53543 - 54772 1238 409 aa, chain + ## HITS:1 COG:NMA2040 KEGG:ns NR:ns ## COG: NMA2040 COG0477 # Protein_GI_number: 15794920 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 2 409 3 410 410 572 76.0 1e-163 MTAQQAPLGEKTMAVLMAMLVALMPFSVDAYLPAIPEMAKSLGSDIHRIEQSLSFFMFGV AFGQVVGGSISDIKGRKPVALVGLSIYFAAVVGLTMVNNVEQLLNLRALQAFGAGMTVVI SGALVRDYYSGRKAAQMFALIGIILMIVPLMAPMIGAGLQNLGGWRMIFGFLACYSLLLW GLMWYFLPKPHQKGKISMDVFGVVAGRFKRVLRTRAAMGYLFFQAFSFGSMFAFLTESSF VYQHLYHVSPNQYAWIFALNIITMMSFNRVTAWRLKTGTHPQNILKWGIIVQFAANLLMT VLVLSLSLPPLWALVPCVMFSVGTQGLVGANTQACFMSYFSAEGGSANAVLGVFQSLIGA SVGMATTWLHNGSALVMTGMMLSSTVCGIVLLWICSHQAWMENDKKEYV >gi|241319676|gb|ACQV01000022.1| GENE 45 54834 - 55643 1247 269 aa, chain + ## HITS:1 COG:NMA2026 KEGG:ns NR:ns ## COG: NMA2026 COG0796 # Protein_GI_number: 15794906 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Neisseria meningitidis Z2491 # 5 269 6 270 270 460 87.0 1e-129 MSTSKQRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQI VDFLLENDVKALVIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGIIA TNTTVNSNAYARAIHSKNNDTLVRTQAAPLLVPLVEEGWLDHEVTRLTVREYLKPLLADD IDTLVLGCTHFPLLKPLISHEAQNVTLVDSAITTAEATAKALAQAGLLNTENDNPDYRFY VSDIPLRFRTIGERFLGRSMEQIEMVTLG >gi|241319676|gb|ACQV01000022.1| GENE 46 56033 - 56551 205 172 aa, chain + ## HITS:1 COG:no KEGG:LBF_2143 NR:ns ## KEGG: LBF_2143 # Name: not_defined # Def: hypothetical protein # Organism: L.biflexa_Patoc1_Ames # Pathway: not_defined # 5 152 25 178 198 79 32.0 6e-14 MPAYLTEQNLGNIFSTLLPDTPFIHNKTVPNSGVKMRPDFRFETLKLIVEFDGSQHYQDV NVLFRDKEKDRIYQAMGYRIVRIPYFIQMTQELLHILFQQEFSYQQCYPHGFIDDNAVLP ANFCELGIMQFQADLGRFDIYRLDIISSLRKKITIKKEINLVLPPSLHDLID >gi|241319676|gb|ACQV01000022.1| GENE 47 56957 - 57622 1067 221 aa, chain - ## HITS:1 COG:NMB0391 KEGG:ns NR:ns ## COG: NMB0391 COG0637 # Protein_GI_number: 15676305 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Neisseria meningitidis MC58 # 1 221 1 221 221 389 97.0 1e-108 MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELDISIDRKFNEQLKGVSRDDSLKRILAHG GKTVSEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLEALRANGKKIALASASKNGP FLLERMGLTHFFDAIADPAAVAHSKPAPDIFLAAAEGVGADIRQCIGIEDAAAGVAAIKA AGALPIGVGKAEDLGSYIALVSGTAELTYAYLQNVWAQSGR >gi|241319676|gb|ACQV01000022.1| GENE 48 57635 - 59893 3541 752 aa, chain - ## HITS:1 COG:NMA2098 KEGG:ns NR:ns ## COG: NMA2098 COG1554 # Protein_GI_number: 15794973 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Neisseria meningitidis Z2491 # 1 752 1 752 752 1495 97.0 0 MYTRIMEISPWTLRSVKLEKEHKRLQESLTSLGNGYMGMRGSFEETYSADSHLGTYIAGV WFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDLAKNDVTNFSVELDMQHGV LRRSFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTHQVRIDSIIDADVKNEDSNYE EKFWQVLDKGVSDGLSYIATQTVANPFGVEQFIVNAEQTFAGSFKALCGSQTDWQVSNSF EAEVGGTPETFEKRVIVTTSRDYQGLEAVKAAGRALSEKVAGVAFETLLEAHKAGWLRRW EIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEKYGGATYWDTEAYAV PLYLALAEPEVTRNLLQYRRNQLPQAQHNAREQGLAGALYPMVTFTGIECHNEWEITFEE IHRNGAIPYAIYNYTNYTGDESYLAKEGLEVLVEVSRFWADRVHFSKRNGKYMIHGVTGP NEYENNINNNWYTNTLAAWVLDYTREALAKYPRPDLNVSAAELEKWADISANMYRPHDEE LGVFVQHDGFLDKDIRPVSALSPDDLPLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFN IDEKRRNFDFYEPMTVHESSLSPCIHAILAAELGKEEKAVEMYQRTARLDLDNYNNDTED GLHITSMTGSWLAIVQGFAQMKTWGGKLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKEN VVFTLLKGEPLDLQVYGKDITLNGSHTVALEK >gi|241319676|gb|ACQV01000022.1| GENE 49 59968 - 61320 1448 450 aa, chain - ## HITS:1 COG:NMB0388 KEGG:ns NR:ns ## COG: NMB0388 COG0477 # Protein_GI_number: 15676302 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 1 448 1 448 451 773 94.0 0 MSEHTQKTAKQGLPSLAKSTIWMLSFGYLGVQTAFTLQSSQMSRIFQTLGADPHNLGWFF ILPPLAGMLVQPIVGYYSDRTWMPRLGGRRLPYLLYGTLIAVIVMILMPNSGSFGFGYAS LAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSYAYGIQSFLANTGAVVAAILP FVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAFTIFKVKEYDPETYARYHGIDVA ANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYMWTYSAGAIAENVWQTTDASSVGYQ EAGNWYGVLAAVQSIAAVICSFILAKVPNQYHKVGYFGCLALGALGFFSIFFIHDQYALI LSYTLIGIAWAGIITYPLTIVTNALSGKHMGTYLGLFNGSICMPQIVASLLSFILFPMLG SHQATMFLVAGAVLLLGAFSVCLIKETHRE >gi|241319676|gb|ACQV01000022.1| GENE 50 61661 - 63337 2264 558 aa, chain + ## HITS:1 COG:NMB0387 KEGG:ns NR:ns ## COG: NMB0387 COG0488 # Protein_GI_number: 15676301 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Neisseria meningitidis MC58 # 1 558 1 558 558 1076 99.0 0 MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGAGKSTVLRIMAGVDKEF EGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQKRLEEVYAEYANPDADFD ALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWDAKIGNLSGGEKRRVALCKLL LSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHG IPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQELEWVRQNAKGRQAKSKARLARFEEM SNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSKSFGDKVLIDDLSFKVPAGAIVGIIGP NGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMSLIDQSREGLQNDKTVFDNIAEGRDILQV GQFEIPARQYLGRFNFKGSDQSKIAGQLSGGERGRLHLAKTLLSGGNVLLLDEPSNDLDV ETLRALEDALLEFAGSVMVISHDRWFLDRIATHILACEGDSKWVFFDGNYQEYEADKKRR LGEEGAKPKRIRYKPVTR >gi|241319676|gb|ACQV01000022.1| GENE 51 63403 - 64038 698 211 aa, chain - ## HITS:1 COG:NMB1717 KEGG:ns NR:ns ## COG: NMB1717 COG1309 # Protein_GI_number: 15677564 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 210 1 210 210 310 73.0 2e-84 MRRTKTEALKTKEYLMLAALDMFYQKGIARTSLNEIAQATGVTRGALYWHFKNKEDLFDA LFQRICDDIESCIKEDSNNNNEQAWSSFRLTLTRFFERLQHNELHYKFHSILFLKCEHTE QNEAVIAIAKKHQALWREKIVAVLTDAVQQKALADNLDTDMAVIFIKSSLDGLIWRWLSS GQGFDLAQTAPRMIEIIIDTLENHLQLRKQS >gi|241319676|gb|ACQV01000022.1| GENE 52 64265 - 65533 1732 422 aa, chain + ## HITS:1 COG:NMA1970 KEGG:ns NR:ns ## COG: NMA1970 COG0845 # Protein_GI_number: 15794853 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Neisseria meningitidis Z2491 # 1 417 1 411 412 529 80.0 1e-150 MALYASKMMRVAAIAAATALALSACGKGDEKAAGQQAQGSQQQQKQPAPEVRVVTVHPET VALTTELPGRLESLRTAEIRAQVGGILQKRLFQEGSYVQAGQPLYQIDSSSYEANLESAR AQLASAQATLAKANADLARYKPLVAADAISQQEYDAAVTAKRSAEAGVKSAQAAIKSAGI SLSRSRITAPISGFIGQSKVSEGTLLNSGDTTVLATIQQTNPMYVNVTQSASEVMKLRQQ VAEGKLLAANGAIAVDIKFDDGTVYPEKGRLLFADPTVNETTGQITLRAAIPNDRNILMP GLYVRVLMEQVAVDNAFVVPQQAVTRGSQDTVMVVNDKSEMEARVVTVAQQQGTNWVITD GLKDGDKVIVEGISIAAMSGAKQVTPKEWTPPANAAAATPAVSDGQAASEAKPEAKAASE AK >gi|241319676|gb|ACQV01000022.1| GENE 53 65545 - 68757 4012 1070 aa, chain + ## HITS:1 COG:NMA1969 KEGG:ns NR:ns ## COG: NMA1969 COG0841 # Protein_GI_number: 15794852 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Neisseria meningitidis Z2491 # 1 1065 1 1067 1067 1761 88.0 0 MSKFFIDRPIFAWVIAIFIIAAGIFGIQKLPISQYPSVAAPTITLTATYPGASAQVMEDS VLAVIERNMYGVEGLDYMTTSANSSGSGSVSLTFTPETNENLAQVDVQNKLSEVLSTLPS TVQQYGVTVSKARSNFLQVVMLSSERQSIEEMNDYAQRNIVPELQRIDGVGQVRLFGAQR AMRIWVDPKKLQNYNLSFATVTNALATQNIQISAGSIGSLPAAAGQTISATVTAQGQLST AEEFGNIILVSNTDGSNVYLKDVAKVSLGMQDYSSSTRLNGVNTTGMAVMLSNSGNALAT ATAVKEKMAVLQKYFPDGMSWKVPYDTSKFVEISIEKVIHTLLEAIVLVFLVMYLFLQNI RYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMVLVIGIVVDDAIVVVENVERIMAS EGLSPKAATKKAMGQISGAVIGITAVLMSVFVPLAMFSGATGNIYKQFALTMAASIGFSA FLALTLTPALCATMLKPIQKGHHEEKKGFFGWFNKKFDNWTHGYEGWVAKVLRKTLRMMV VYIGLTVVGVFLFMRLPTSFLPTEDQGNLMLSVQLPAGATKERTDATLAQITQLAKSIPE IENIITVSGFSFSGSGQNMALGFVILKDWSERTAPGSDATSISGKLTGMMMATLKDGFGL AIVPPAIMELGTGSGLTIYLQDRNNSGHAALLAKRNELIDKMRKSGLFNPSTVRASGLED APQLKIDINRSAAAAQGISFSDIRTALASALGSSYVNDFPNQGRLQRVMVQADASARMQP ADILNLTVPNKSGVAVPLSTIATVSWENGMEQSVRFNGYPAMELSGSPVNGVSSGQAMAA VQQMVDDMGGGYSLEWGGQSREEAKGSSQTVVLYALAAAAVFLVLAALYESWSIPLAVIL VIPLGLIGAALGVTGRNMFEALLGSIPAYANDIYFQVGFVTVMGLSAKNAILIIEFAKDL QAQGKSALEAALAAAHLRFRPIIMTSFAFILGVVPLYVASGASSASQRAIGTTVFWGMLI GTILSVFLVPLFYVVVRKFFKETAHEHEMAAKHAAEAGMIEDGKHDSDKH >gi|241319676|gb|ACQV01000022.1| GENE 54 68814 - 70220 544 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 16 461 11 457 460 214 32 4e-54 MKKITFKPVLTAVAAAVALSACTMMPKYEQPQVAVADTFKYDTVDDSIRAAELGWQDYFA DPRLHRLIDIALERNTDLRTAALNAEIYRKQYMIARNNLLPTVNASGTGSRQGSLSGGSV SSQYSVGLGATSYELDLFGRVRSTSEAALQGYFNVAANRNAAHLTLISTVAKAYFNERYA EESMALAQRVLQTREATYKLSQLRHKAGVISAVDLRQQEALIESAKADYASAVKNREQAR NSLAMLINQPLPEDLPVGLPLSKQFKMTKLPAGLSSDVLLNRPDIRAAEHALKQANANIG AARAAFFPRISLTGSVGTASGELSGLFKSGTGIWAFAPSITLPIFDWGTNKANLDVAKLR QQAQIVAYEAAVQSAFKDVSNALVAREQLDKSYAALSKQSRAYNDSLRLINLRYKHGVSN ALDLLDAERSSYGAETALLANQLTRLENLADLYKALGGGLKRETKAAE >gi|241319676|gb|ACQV01000022.1| GENE 55 70295 - 71632 1641 445 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1544 NR:ns ## KEGG: NMCC_1544 # Name: not_defined # Def: integral membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 5 443 6 443 464 681 81.0 0 MTAQLSLAVVGHTNTGKTSLLRTLLRDSTFGEVKNAPSTTRHVEEALINDGDDSLVCLYD TPGLEDAGGVLDWLETHTSARDDGIERIQQFLSNHEAHHEFNQEAKVLRQVMQSDMAMYV IDAREPVLDKYKDELTILSWCAKPIMPVFNFTQNQDLTAWTNMLARRTLHVYAGFDTVAF DFEGEIRLWDNLATMLPKRDILDRLINMRRREWQRLDTEARREIADFLLDAAAFTQEIAE NDDPAPTLEVMQSEIRQLERQMQQRLFTLYRFYHDEVGNDSTWMPKAFKQDPFDSELLKH YGIRTGTGATAGALIGLGLDIATLGGSLGLGTAIGGLLGGILPNAQDITDKINGRQTLHI DPETLTLLAARALDLLHVLQTRGHAAQSHIELKERKAPWNAAKLPSELNKARSNRKWSSL NTHQPEASRNERAAYVATLSEKLKA >gi|241319676|gb|ACQV01000022.1| GENE 56 72207 - 72692 696 161 aa, chain - ## HITS:1 COG:NMB1650 KEGG:ns NR:ns ## COG: NMB1650 COG1522 # Protein_GI_number: 15677499 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 9 161 1 153 154 253 88.0 9e-68 MKTTDIKAMKELDKTDLKILKLLQQNARIPMTELAEKVGLSTTPVTERVRRLERDNLITG YHAHLNPHALGQSLLVFVELKLRSKSGNIFEDFKREVLKIPQILECHLVSGEYDYLIKVR LPNMSAYRDMLGNILLQLPAASESRSYVVMEEVKEEVVLDI >gi|241319676|gb|ACQV01000022.1| GENE 57 72885 - 73943 1207 352 aa, chain + ## HITS:1 COG:NMA1906 KEGG:ns NR:ns ## COG: NMA1906 COG0787 # Protein_GI_number: 15794791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Neisseria meningitidis Z2491 # 1 352 1 352 352 615 80.0 1e-176 MRPLNAQIRLDNLRQNYRFLKELHGNKLLAVIKADAYGHGAVRCAHALADIADGFAVATV DEGVELRQNGIKNPIVLLEGVFEAAEYADVDRYDLWPAIGSQWQLEAFVHHEWQRPTTVW LKMDSGMHRAGFFPHNYAAAYTALKQSESVENIVKFSHFACADEPENGMTEMQLEAFDLA CEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFGER VLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRASTNSPVAVDGKRSRIIGRVSMDM ITVELEASKEGLGAEVELWGDVININEVSEVAGMIPYEILCNIKRAKFTYIE >gi|241319676|gb|ACQV01000022.1| GENE 58 74003 - 74746 1243 247 aa, chain - ## HITS:1 COG:NMB0806 KEGG:ns NR:ns ## COG: NMB0806 COG1187 # Protein_GI_number: 15676704 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 3 247 8 252 252 402 86.0 1e-112 MQNNDSETMRLSKRMAQLGLCSRREADSYIEQGWVKVNGQTAVLGQKVTERDRIDLNKQA HEKQAARVTILLNKPVGYVSAQAEKGYKSAAELITADNHWEDDDSRIPFSEKHKFGLAPA GRLDIDSVGLLVLTQDGRIAKQLIGENSSSEKEYLVRVRGKLDDKGLALLNHGLSLDGEK LRPAKVEWQNEDQLRFILRQGKKRQIRRMCELVGLRVVGLKRIRMGKVKLGRLPPGKWRY LRTDESF >gi|241319676|gb|ACQV01000022.1| GENE 59 75077 - 77158 3123 693 aa, chain + ## HITS:1 COG:NMA1698 KEGG:ns NR:ns ## COG: NMA1698 COG1966 # Protein_GI_number: 15794591 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 693 1 693 693 1223 95.0 0 MKSLKSFLIWGIVVLVGLASFTTLALSRDEHVSAIWMVTAAISVYCIAYRFYSLYIANRV MQLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWI IFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPGVIASIGILMIMVIIMAVLAL IVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKIGEISIVGFILLMLAVIYGEDVA HSSFGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLTPRDYLSTFLKIGTIAALALGIVIV NPTLQMPAVTHFIDGSGPVFSGALFPFLFITIACGAVSGFHALISSGTTPKMLENETHVR MIGYGGMIMESFVAIMALAAAASLEPGVYFAMNSPAALIGTDANTAAEVITTKLNFPVDA ATLLHTAKEVGENTILSRAGGAPTLAVGMAHIMSRLIPGEAMMAFWYHFALLFEALFILT AVDAGTRVARFMIQDLGSIFYKPFGNTDSIPANLVATFLAVALWGYFLYTGVTDPLGGIN SLWPLFGIANQMLAGVALIMCTVVLVKMKRDRYVWVTLVPAFGVLFVTCYAGLQKLFHSD PRVSFLAHAGKYRDALASGKVLAPAKDIGEMSQIIFNDQINAGLTALFLAVVVIVTVYGF RTAMKARKVGWPTAKEIPAVYRDGKQPEAQSEA >gi|241319676|gb|ACQV01000022.1| GENE 60 77124 - 77342 160 72 aa, chain + ## HITS:1 COG:NMA1699 KEGG:ns NR:ns ## COG: NMA1699 COG2879 # Protein_GI_number: 15794592 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Neisseria meningitidis Z2491 # 9 72 1 64 64 122 93.0 2e-28 MENSRRLRVKHKLASWWKTIKLTANLMAGVPDYENYVARQRRHNPNAPVMTELQFQDYCR KRRCGANGGRCC >gi|241319676|gb|ACQV01000022.1| GENE 61 77460 - 77750 484 96 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_1184 NR:ns ## KEGG: NT05HA_1184 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 95 2 96 97 106 62.0 2e-22 MIQSSDITLTFEEIVAASRCRRDWLLELIAEDIISIDGAPEKSTFSGFHLARIRRAQRLS RDFEAGIPALGLIMRLLDEVEELRKIQRPLVLLEEE >gi|241319676|gb|ACQV01000022.1| GENE 62 77766 - 78746 1251 326 aa, chain - ## HITS:1 COG:STM1112 KEGG:ns NR:ns ## COG: STM1112 COG2214 # Protein_GI_number: 16764470 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Salmonella typhimurium LT2 # 8 319 1 292 306 212 40.0 8e-55 MSSQRNNMAEKNYYEILGVAKDADEAEIKKAYRKLVRKYHPDVSKEPDAAERTVEINRAY ETLSDKEKRTEYDEMLANPYGRSAEGNPFGQGGNPFGNGFNGGGFHYERHEDEPFGAGDF NFEDLFSSFRQSHTRSEQPRGPIKGEDQHAELSIDIYAAYVGAERSMTLNVPTLDEYGRA VYQNKTLNVKIPKGIAEGQQIRLAGQGLPGYNGGENGDLYLKIKFHDQPDLYVKNRKDVY QTIDVKPWEAVLGGKIIVPTASGRLQVNLPANSQSGKSIRLKGKGIPAKEAGDLYLNIRI NVPPVESEADRAAWEKLAEHFAAKQA >gi|241319676|gb|ACQV01000022.1| GENE 63 78931 - 79413 716 160 aa, chain - ## HITS:1 COG:no KEGG:TERTU_0073 NR:ns ## KEGG: TERTU_0073 # Name: not_defined # Def: hypothetical protein # Organism: T.turnerae # Pathway: not_defined # 22 157 22 161 164 100 39.0 2e-20 MSPNRILATAFLFASAFASADVHIDESIPYRDKEEIDTRIVSECLEVGSIMSKSLQETAA KSDVTVVRDGKKQGTYADIAITSAMSAGNAFIGHAKGMAVSAALYVDGKQVNKKTFTRNS SGGMFGAYKSSCAVLNRTSKVLGSDIAQWVVREQKNAQDK >gi|241319676|gb|ACQV01000022.1| GENE 64 79586 - 80290 982 234 aa, chain - ## HITS:1 COG:ygeR KEGG:ns NR:ns ## COG: ygeR COG0739 # Protein_GI_number: 16130767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 10 230 16 250 259 152 39.0 4e-37 MNTNFISTFQTALKRLALISTIAVLAACAGNNTSSNRAVPDGYYKVRPGDTLTQIAKRYG QNVNILVAWNNLPNASQIEVGQVLRVLRHVAPRSTATQQHQTTAVTPINQLNLQWPTDNA LSSIIQRYNGTTSKGIDIAGTQGQQIRSAAAGTVIYVGEEVRGYGKLILISHNDYTITAY AHNDTLLVQKDQKVQAGQVIATMGSSDSDNVKLHFEVRLNGKAVDPLPYLTRTN >gi|241319676|gb|ACQV01000022.1| GENE 65 80561 - 82945 3474 794 aa, chain - ## HITS:1 COG:NMA0826 KEGG:ns NR:ns ## COG: NMA0826 COG0574 # Protein_GI_number: 15793797 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Neisseria meningitidis Z2491 # 1 794 1 794 794 1566 96.0 0 MAENYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHNG LSERISEALKQLDVEDVAELARVGKEIRQWILDTPFPEQLDAEIETAWNKMVADAGGADI SVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHHVFASLYNDRAISYRVHKGFE HDIVALSAGVQRMVRSDSGASGVMFTIDTESGYDQVVFVTSSYGLGENVVQGAVNPDEFY VFKPTLKAGKPAILRKTMGSKQIKMIFTDKAEAGKSVTNVDVPAEDRQRFSITDAEVTEL AHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPETVKSQEDSSRNLRRFSINGEKVVL CEGRAIGQKVGQGKVRLVKDASEMDSVEAGDVLVTDMTDPDWEPVMKRASAIVTNRGGRT CHAAIIARELGIPAVVGCGNATDLLSEGQEVTVSCAEGDTGFIYSGLLDVQITDVALDNM PKAPVKVMMNVGNPELAFSFANLPSEGIGLARMEFIINRQIGIHPKALLEFDKQDDEVKA EITRRIAGYASPVDFYVDKIAEGVATLAASVYPRKTIVRMSDFKSNEYANLVGGSIYEPH EENPMLGFRGAARYVADNFKDCFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVK ALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLV SDSFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDT VIETWLYLANELNK >gi|241319676|gb|ACQV01000022.1| GENE 66 83363 - 84184 991 273 aa, chain + ## HITS:1 COG:NMA0827 KEGG:ns NR:ns ## COG: NMA0827 COG1806 # Protein_GI_number: 15793798 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 273 1 273 273 496 88.0 1e-140 MTDPRQVFYISDRTGLTAENIGEALLNQFGNVEFKRHTYPFIDTPEKARAVVDKVNQSAE KFGVRPIAFVSVVNDEIREIIKKANAFHINFFETFLGLLEKELNTEAVAAQQGHHSIGNT QRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKTPTCLYLALQYGIRAANYPL IPDDLESTDLPRMVKPYKDKLFGLTIQPERLQAIRHERRPNSTYAKIDTCRSEIADAQNM FKRHGVPFTNTTDKSVEELAVHILQACKLKRRF >gi|241319676|gb|ACQV01000022.1| GENE 67 84241 - 84807 1009 188 aa, chain - ## HITS:1 COG:NMA1060 KEGG:ns NR:ns ## COG: NMA1060 COG0717 # Protein_GI_number: 15794009 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Neisseria meningitidis Z2491 # 1 187 1 187 188 374 96.0 1e-104 MSIKSDKWIRRMAEEHGMIEPFEPNQIKEANGQRIISYGTSSYGYDIRCANEFKIFTNIN STIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGII VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEVCETSYKDRNGKYMGQ TGVTLPKT >gi|241319676|gb|ACQV01000022.1| GENE 68 84934 - 85362 705 142 aa, chain - ## HITS:1 COG:NMA1061 KEGG:ns NR:ns ## COG: NMA1061 COG4642 # Protein_GI_number: 15794010 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 135 2 136 138 191 68.0 4e-49 MKYLALLPIAFMLGTPAIAETINPYQEKGCAYDGDVGKDGKPSGKGTWKCQDGRSYVGTF KNGKFDGKGAYTVSGNRETFIEPFSSNSAKLRNMTLEGMFKKGKAHGNFTASQNGIPVFI MKCEDGMIKEVKLPKKSASKTK >gi|241319676|gb|ACQV01000022.1| GENE 69 85388 - 86170 996 260 aa, chain - ## HITS:1 COG:SP1044 KEGG:ns NR:ns ## COG: SP1044 COG1397 # Protein_GI_number: 15900915 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Streptococcus pneumoniae TIGR4 # 1 259 1 283 284 234 45.0 9e-62 MLGAVIGDIAGSRFKFDNYRHTDFDIFSPDSDFTDDTICTVAIADWVLQGCNDNLASILQ GWCRAYPCPKGAYGGRFSQWIEWKDPEPYNSWGNGSAMRVSAVGWAFATLEETLHFAKQS AIVTHNHPEGIKGAQAVAAAIFWARTSIGKAQIKENITRQFGYDLSQSCDQIRPYYHFNE SCQETVPQAITAFLESDDFEHAIRLAVSLGGDSDTLAAITGSIAEAYHGIPTAMREHALA ILPRRIAETLLTFESQYQAV >gi|241319676|gb|ACQV01000022.1| GENE 70 86249 - 87148 1476 299 aa, chain - ## HITS:1 COG:NMB0851 KEGG:ns NR:ns ## COG: NMB0851 COG2974 # Protein_GI_number: 15676747 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Neisseria meningitidis MC58 # 1 299 1 299 299 548 92.0 1e-156 MWFKQISFYPLNKDKLPELEVLADKLAQSEFAHCQGLDWFSEGFAAPVSFSPELVFPADY TWRVALKKEEKVLPAGVIRDILDEKVLEIQNNEARNVGRKEKQELKEQITDDLLPRAFTR SSRTQAIFDTRHGYLLVNNAASAKAENILTKLREALGGLEAALPNTKQSPSSLMTSWLLQ GHCEGGFELDSDCELKGVGDVVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF ILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQILMTEAISTMLEELVSYLGGWQE >gi|241319676|gb|ACQV01000022.1| GENE 71 87483 - 88778 1713 431 aa, chain + ## HITS:1 COG:NMA1943 KEGG:ns NR:ns ## COG: NMA1943 COG0172 # Protein_GI_number: 15794826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 431 1 431 431 815 94.0 0 MLDIQLLRSNTAAVAERLAARGYEFDTARFNALEEQRKAVQVKTEELQASRNSISKQIGA LKGQGKHEEAQAAMDQVAQIKVDLEQAAADLDAVQKELDAWLLTIPNLPHESVPAGKDET ENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSGARFTVMKGQIARLHRALAQF MLDTHTLKHGYTEHYTPYIVDDLTLQGTGQLPKFAEDLFHVTRGGDESKKTQYLIPTAEV TLTNTVADSIVAGSDLPLKLTAHSPCFRSEAGAYGKDVRGLIRQHQFDKVEMVQIVHPEK SYEALEEMVGHAENILKALELPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSCS NCEDFQARRMKARFKDENGKNRLVHTLNGSGLAVGRTLVAVLENHQNADGSINVPAALQP YMGGVTKLEIK >gi|241319676|gb|ACQV01000022.1| GENE 72 88865 - 89872 1366 335 aa, chain + ## HITS:1 COG:NMB1539 KEGG:ns NR:ns ## COG: NMB1539 COG3039 # Protein_GI_number: 15677391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 335 1 335 335 626 93.0 1e-179 MTTFFQQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTHYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIADYSTLCRYRNWLAQDNTLSEL LELINRQLTEKNLKIEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDAR WTKKNGLYKLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGYD SKENRQHLKEHQLLDGIMRKACRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA >gi|241319676|gb|ACQV01000022.1| GENE 73 90072 - 90875 1459 267 aa, chain - ## HITS:1 COG:NMB1612 KEGG:ns NR:ns ## COG: NMB1612 COG0834 # Protein_GI_number: 15677462 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis MC58 # 1 263 1 266 268 414 86.0 1e-115 MNIKKWLATALACSALALTACGGQSNNASAPTDKVYRVGSNAEFAPFESLDSAGKVEGFD VDLMNAMAKAGNFKVEFKHQPWESLFPSLNNGDVDIVMSGVTITDDRKQSMLFSDPYFEI TQVVLVPKGKKVASSEDLKNMAKVGVVTGYTGDFSVSKLLGNDNPKIARFESVPLIIKEL ENGGLDSVVSDSAVIANYVKNNPTKGLDFISLPDFTIENYGIAARKGDEATIKMLNDALK KVRESGEYDKIYAKYFAKEGEKAETAK >gi|241319676|gb|ACQV01000022.1| GENE 74 90952 - 91203 571 83 aa, chain - ## HITS:1 COG:no KEGG:NGK_2005 NR:ns ## KEGG: NGK_2005 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 82 1 82 83 120 85.0 1e-26 MSSIEQRLEYLEEANDALRMQNHVLATALKGLIRSLPSDMANDAVESIQLTFEDALAELS YEDSPHTDLFHDVTYAFFREKDH >gi|241319676|gb|ACQV01000022.1| GENE 75 91366 - 92166 970 266 aa, chain + ## HITS:1 COG:no KEGG:NGK_2004 NR:ns ## KEGG: NGK_2004 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 12 266 6 256 256 243 54.0 6e-63 MENNRLDPTALKEEDLNWEKRLERLRQARQFNTAPTHAPLVKKSDDAVEAAPKTAPKKEY KLDADNREKVLEEYLYRWQLEHNTALADEGEAVETDAMVVLQDNWLSAQSALQAEASERH IESTRTVRLNPKSGAVDFDVPEVEETEKPENDDTKAAEEAVSDGLEQEPAINVHINVLNP QAIGRREVFCVSEKELTERLIKRLRPHVVDAVNGMIRIAVQKQMALFTYQLQQMLNEQAP GLVEDVLEHNVKRILDDMKTEMKYRR >gi|241319676|gb|ACQV01000022.1| GENE 76 92288 - 92848 683 186 aa, chain + ## HITS:1 COG:no KEGG:Shew_1881 NR:ns ## KEGG: Shew_1881 # Name: not_defined # Def: hypothetical protein # Organism: S.loihica # Pathway: not_defined # 78 186 25 133 133 162 66.0 7e-39 MPDAESGIFFEIVMNKNKIIVLLIALVAVFAYNKMQNKQLVQSQNQQQIEVVQKQNNTGK KNADTAQQQIGSGKESAEAVLKQAFENEQSDIQVEGEGTVWKTLPDDNKGTRHQRFILKL SSGQTLLVAHNIDLADKIKGLKKGDKVAFYGEYEWSEQGGVIHWTHHDPAGRHEDGWLKH GGQVYQ >gi|241319676|gb|ACQV01000022.1| GENE 77 92962 - 94131 1458 389 aa, chain + ## HITS:1 COG:NMA1808 KEGG:ns NR:ns ## COG: NMA1808 COG0626 # Protein_GI_number: 15794698 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 734 94.0 0 MSKKLHPQTLAIRSGKEQTEYYEHNQALFLTSSFMWENAQHAADLFSKKIKGFTYTRTAN PTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLKAGDHVISSRSLFGTTVGFINNI VTKFGIEVSHVSPVDVDEWKAAIKPNTKLFFLETPSNPLGEVADLEALAELAHSIGALLV VDNSLLSPAGSQPLKHGADISVSSATKAIDGHGRVMGGVLAGSEELMTQVAVYCNSCGLA MSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQAQPQVQAVYYTGLPDHPQAELIRKQ QNGGGIVIGFEVADQEAAWKVVDSVELFSRTANLGDVRSTITHPWTTTHGRMQPEEKLAA NIRPGLVRLSVGLEYVDDLIEDLKQVLNK >gi|241319676|gb|ACQV01000022.1| GENE 78 94218 - 94424 334 68 aa, chain + ## HITS:1 COG:no KEGG:NGK_2001 NR:ns ## KEGG: NGK_2001 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 68 31 98 98 96 88.0 2e-19 MTEAEFASWAMKILLSGLIIFLGFIVWNLGKESKAGKFGIAMLFLVLGLGVFGFVFKELL ISFLVLPK >gi|241319676|gb|ACQV01000022.1| GENE 79 94497 - 95288 1084 263 aa, chain - ## HITS:1 COG:NMB1663 KEGG:ns NR:ns ## COG: NMB1663 COG0561 # Protein_GI_number: 15677512 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Neisseria meningitidis MC58 # 3 263 2 262 262 298 56.0 6e-81 MNNPEIIFFDIDDTLYRKYTDTLRPSVAQAMHALKAKGILTAIATGRPEAAMPAKVKALI QECGIDMLVTINGQYISFRGEPLQSYPLDIADIETAINLLEQHKIDYAFVNNQEIAVSSH SPRVIEGLSHILPNFLTDKEYFRKQPVYQMLVFVDKEEEKILQPLTQQHGFKSARWHEYA VDLLRKEGSKARGIAHAVEKLGIDMSKVMAFGDSFNDLEMLSTVGFGVAMGNGEEAAKAA AQFVCPSVDEDGVLRGLQELGVI >gi|241319676|gb|ACQV01000022.1| GENE 80 95485 - 96876 1370 463 aa, chain - ## HITS:1 COG:NMB1451_1 KEGG:ns NR:ns ## COG: NMB1451_1 COG0847 # Protein_GI_number: 15677307 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Neisseria meningitidis MC58 # 5 168 14 177 177 237 66.0 4e-62 MSDFARWPLLSEAFSRLGRPVVVVDLETTGGNSYQDRITEVALVRFEQGRTTHYEQLVNP CRSIPEFVARLTEIHDETVKNAPVFADIAGDLLPLLQGAVVVAHNSRFDYTFLRHEFARI HTDFAAPSLCTVQLSRRLYPEFYKHSLDSIIERTGIQTANRHRAMTDVVALCDYLELSLA EKNHQQWDEHVRVLMNPKMLPTWLPNSLAQQLYALPDSYGVLVWLDHFGKAQAIEAHERA YSETATLLHSKKLPPHIKAAASIRFIPAVGQLHTLWLKAQTMQEYQLMPSEKSTSFSTVR FIADEHGSLQARIVLLNSGTRNWRPYGLFAHKKAAKRALTQWSQEHKLCPDSLNILPTSY AKGEPCPVEAVGKCNGNCRQPNGIKHQNQRITELAALLPVTDWGKAHEIEITETDPLTGN SITLLCAGGALALPDGSWYFDSSLPIVIKNKFRQDKENIRLIA >gi|241319676|gb|ACQV01000022.1| GENE 81 97325 - 99550 1372 741 aa, chain + ## HITS:1 COG:NMA0906_1 KEGG:ns NR:ns ## COG: NMA0906_1 COG0658 # Protein_GI_number: 15793872 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Neisseria meningitidis Z2491 # 49 488 1 438 440 521 73.0 1e-147 MVWRFVLPAWVVGVVLSFALPFVPSWWIWLSVIIVTLALCRRFAVAWLVLAVCMGMAFGV WRTGLVLAGQWPLGEAVAKVLTVEVADMPRDDGRRVQFAARAWDERGQAFDLMLSDYQRR DWAVGSRWSVSARVRPVIGEVNVRGLNRETWALANGIDGMGTLGRDRKLVRQGGGFGLAD MRDAVSRSWQRTGGKYPEFSDGIGLMRALSIGEQSALRPPLWQAFRPLGLTHLVSISGLH VTMVAVLFAWLIKRIFRYLPWIPAKPRVWVLAGGVAGALFYALLAGFSVPTQRSVLMLAA FAWAWWRGSGGSGRTAWWQALAVVLLLDPLAVLGVGTWLSFGLVAALIWASSGRLKESGW RLAVRGQWAATVLSVVLLGYLFASLPLLSPLVNALAIPWFSWVLTPLALLGSVFPFELVQ LVAAFLAEYTLRGLVWLATVSPEFAVAAAPVPLLVLAIMAALLLLLPKGMGLKPWACLVL LGFVFYHPAKLEEGVARVTVMDAGQGLSVLVQTRNRNLLFDTGTEQVAQTGIVPSLNAMG VRRLDSLILSHHDIDHDGGFQSIAAVGTDKLLAGQPEFYPNAEFCQEDKWRWDGVDFELL RPSENTGKEDNDQSCVLRVVANGKALLITGDLGVKGEAGLIEKYGNALYSQVLILGHHGS STASSGSFLHTVSPQYAVASSGYANAYKHPTVAVQNRVRAHGITLLRTDLSGALVFALGQ GNIFQGRLKKDKFYWQKKPFE >gi|241319676|gb|ACQV01000022.1| GENE 82 99955 - 100575 735 206 aa, chain + ## HITS:1 COG:NMA0890 KEGG:ns NR:ns ## COG: NMA0890 COG0135 # Protein_GI_number: 15793859 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Neisseria meningitidis Z2491 # 1 200 1 200 208 279 69.0 2e-75 MNTIRTKICGITRPEDALAAAELGADAIGLVFYAKSKRAVNIEQAQAVVKNLPPFVSVVA LFVNENEQTIREILRQVPIDVIQFHGDEDDDFCRRFDRPYLKAVRVQSAADIQTACAKFP NARALLFDAYHPTEYGGTGQSFDWTMLHGNIGKPWILAGGLTAENVAEAVKISGAAAVDV SGGVEISGGIKSREKMAAFIQAVKAV >gi|241319676|gb|ACQV01000022.1| GENE 83 100612 - 101214 421 200 aa, chain + ## HITS:1 COG:NMA0903 KEGG:ns NR:ns ## COG: NMA0903 COG3663 # Protein_GI_number: 15793869 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Neisseria meningitidis Z2491 # 6 195 37 226 231 339 84.0 2e-93 MQEPIVESHPFAALLPPQATVMMMGTFPPKEEKHAMQFHYPNFQNDMWRVYGLVFFGDVA HFQKQGEKAFDADKIKAFLSEKEIASCPTVLKAIREHGNASDKFLKVIETVDLAAVLAQM PECRHLCTTGGKATEVLLEIQGSGMKMPKTGETVPFPYAGRELTLTRLPSTSRAYPLSLA KKAAAYRAFFEMAGLTVFQE >gi|241319676|gb|ACQV01000022.1| GENE 84 101219 - 101629 295 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261380440|ref|ZP_05985013.1| ## NR: gi|261380440|ref|ZP_05985013.1| conserved hypothetical protein [Neisseria subflava NJ9703] # 1 123 1 123 136 175 92.0 8e-43 MDRYEISVMVFMALWWLFNVVSVWLKAKQWHIKVLLGGTLLYVIQISAVIMSVNGLNWIF LNISTINTNELIIALLVLNFLGWWLLALWLGMLVLKLCLRNKNKEKYIAPPLGTALVATS SCTLLFLFCLLILLFN >gi|241319676|gb|ACQV01000022.1| GENE 85 101741 - 102943 2071 400 aa, chain + ## HITS:1 COG:NMB0699 KEGG:ns NR:ns ## COG: NMB0699 COG0133 # Protein_GI_number: 15676597 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Neisseria meningitidis MC58 # 1 400 1 400 400 782 96.0 0 MKNYHAPDENGFFGEHGGLYVSETLIPALQELVEAYKAAKEDPSFWEEFRHDLKHYVGRP SPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALLARRMGKKRVIAETGAGQH GVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGANVVSVDSGSRTLKDAMNEAMR EWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAKAQMQEAIGRQPDVAVACVGGGS NAIGLFHPYIGEENVRLVGVEAGGLGVDTPDHAAPITSKAPIGVLHGFRSYLMQDENGQV LGTHSVSAGLDYPGIGPEHSHLNDIKRVEYTVAKDDEALEAFDLLCRFEGIIPALESSHA LAWAVANAPKMGKDQVILVNLSGRGDKDINTVAKLKGIEL >gi|241319676|gb|ACQV01000022.1| GENE 86 103138 - 104043 686 301 aa, chain + ## HITS:1 COG:BS_yyaM KEGG:ns NR:ns ## COG: BS_yyaM COG0697 # Protein_GI_number: 16081133 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 291 1 285 305 91 25.0 2e-18 MKHLAIHLKLLGMAAFWGASWPMGRMLGQALPPLTGGMLRFLTAAILLLGWLFTRYRLRT LAVLSRKQWLGLALAAAFGVFGFTVLSMLGLQRIPASRATVLVTFNPVLTMFFAALLFGE KLNGKIVSGMLLAVAGSIWAVTHGEIAAFLSGGGIGWGEVLVFCSLCCLVTYTMIGRAVL RGIDALTVTVATAWLGAMMLLPPALISDGLPFGMLAEMDGRGWFSLIGLSIGATVLSYAW YFEGVKTLGAGSAAAYITLVPVFGILCSAWFLGEALHVSLVAGCLAAVGGLALMQYGRRA V >gi|241319676|gb|ACQV01000022.1| GENE 87 104096 - 105385 1045 429 aa, chain + ## HITS:1 COG:NMB0732 KEGG:ns NR:ns ## COG: NMB0732 COG0161 # Protein_GI_number: 15676630 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Neisseria meningitidis MC58 # 2 429 3 433 433 857 94.0 0 MSEHSSLLDFDRAHLLHPYTSMTDPLSVYPVRRAEGVHIELADGTRLIDGMSSWWCAIHG YNHPVLNQAVEAQIKQMSHVMFGGLTHEPAVELGKLLVGILPQGLDRIFYADSGSVSVEV ALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMSICDPETGMHHIFGSALPQRYFVDN PKSRFDDEWDEADLQPVRALFEAHHADIAAFILEPVVQGAGGMYFYHPQYLRGLRDLCDA FDIVLIFDEIATGFGRTGKMFACEHADVVPDIMCIGKGLSGGYMTLAAAITSQKVTETIS CGEAGVFMHGPTFMANPLACAVACASVKLLLSQDWQANIRRIESILKGRLKAAWDIRGVK DVRVLSAIGVIELEKGVDMARFQADCVAQGIWVRPFGRLVYLMPPYIISDDLLTELADKT VQILKEHSK >gi|241319676|gb|ACQV01000022.1| GENE 88 105382 - 105591 298 69 aa, chain + ## HITS:1 COG:NMA0943 KEGG:ns NR:ns ## COG: NMA0943 COG0132 # Protein_GI_number: 15793901 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Neisseria meningitidis Z2491 # 1 69 1 69 215 134 97.0 4e-32 MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGCQNIADDIAVHRKIMGI PMQEADKQG >gi|241319676|gb|ACQV01000022.1| GENE 89 105594 - 106037 517 147 aa, chain + ## HITS:1 COG:NMA0943 KEGG:ns NR:ns ## COG: NMA0943 COG0132 # Protein_GI_number: 15793901 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Neisseria meningitidis Z2491 # 1 142 72 213 215 246 85.0 1e-65 MPEIFSYPASPHLAARLDGRDLDLEKIRTATQELAAQYEIVLVESAGGLMVPLTENLLTI DYIQQQAYPVILVTSGRLGSINHTLLSFAALKQYGLQLHSLIFNHIHDSKDETVAGDTLE YLKGRLKDEFPEAKWQELAKTEVSDGA >gi|241319676|gb|ACQV01000022.1| GENE 90 106027 - 106521 100 164 aa, chain + ## HITS:1 COG:NMA0944 KEGG:ns NR:ns ## COG: NMA0944 COG3161 # Protein_GI_number: 15793902 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Neisseria meningitidis Z2491 # 27 159 27 153 158 100 50.0 1e-21 MELDIPRGTLCSHAEASSLLPSKAGHLLTVSSLTAALRASGKDFSVEPVYLGLTKGADNS DEIFVRDVLLKLDGETVIQARSACRPDSRLWTELLDCGTQPLGERLFDGTLPLKRSDFEF LRFEDSDYPSFRRPVTARRSYFDWNGETLELTEYFLLKLIDLYR >gi|241319676|gb|ACQV01000022.1| GENE 91 106696 - 107616 945 306 aa, chain + ## HITS:1 COG:NMB0735 KEGG:ns NR:ns ## COG: NMB0735 COG0382 # Protein_GI_number: 15676633 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Neisseria meningitidis MC58 # 18 299 14 295 296 387 73.0 1e-107 MNIRRFFLQILPRYAVGRMVIYAKLMRVDKPIGTLLLLWPTYWALWIASKGVPDADIFIA FTAGTFLMRSAGCVVNDFADRNFDGAVERTKNRPFAKGLVSKTEALLLTVMLCLMAALCL VPLNRFTWLMSLPALFLAVTYPFTKRFFPLPQFYLGLAFSFGIPMAFAAVQDRVPPEAWL MFTANALWTLAYDTIYAMADKEDDLKIGIKTSAITFGHHDITASMLCHFWFTVLMAVLGI KIGATWPYWLVLPVTVYWQYQQYAAIRTRDRQLCFQTFLANNRIGLAWFCGLVCHYFWSF LVSKLF >gi|241319676|gb|ACQV01000022.1| GENE 92 107886 - 108335 714 149 aa, chain + ## HITS:1 COG:NMB0736 KEGG:ns NR:ns ## COG: NMB0736 COG1762 # Protein_GI_number: 15676634 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Neisseria meningitidis MC58 # 1 149 1 149 149 233 83.0 9e-62 MSLIGEILPLSHIVLDLEVSSKKRLFEEAAQLLENEAELPNTNVFDCLFAREKLGSTGLG QGVAIPHGRHACVKKATGAFIRTKEPVAFDAPDGKPVSLIFILLVPENATGEHLEVLSKL AGRFSQKAIREALMAATSAEEVRTLLSEE >gi|241319676|gb|ACQV01000022.1| GENE 93 108339 - 109301 1150 320 aa, chain + ## HITS:1 COG:NMA0947 KEGG:ns NR:ns ## COG: NMA0947 COG1493 # Protein_GI_number: 15793905 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Neisseria meningitidis Z2491 # 1 320 1 320 320 569 89.0 1e-162 MPSISVRRLFSDNQHKLELAWAAGNSGADNRIGVEADKPVLALVGHLNFIHPNQIQVVGV AEAEYLRRLETGELNYDFGELFDIPMSLVIVANGLPVSPKLRDYCHTNSIPLLTSKQESP HLMDVLRIYLQRTLATSTIKHGVFLDVFEVGVLITGQSGLGKSELALELISRGHSLIADD AVELFRTGPEMLEGRCPPMLRDFLEVRGLGILNIRHIFGETSIRPKKILQLIINLVPADD GYMKQLDRLSIRTETASILNVSVRSVTLPVAIGRNLAVLVEAAVRNYILQLRGKDSTKEF LERHQTQLKENEQNHENRPD >gi|241319676|gb|ACQV01000022.1| GENE 94 109282 - 110136 1081 284 aa, chain + ## HITS:1 COG:NMB0738 KEGG:ns NR:ns ## COG: NMB0738 COG1660 # Protein_GI_number: 15676636 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Neisseria meningitidis MC58 # 1 284 1 284 284 479 81.0 1e-135 MKIVLISGLSGSGKSVALKQLEDLGYYCVDNLPLEMLPSLVLYHIERGEETQLGVSVDIR SGINIQEAQEQIQYLRDEGHQVEVLFVEAEEGVLVRRFSETRRGHPLSGQNLTLLESLQK EREWLFPLRDIAYCIDTSKMNAQQLRYAVQQWLNIERVGLLVILESFGFKYGVPNNADFM FDMRSLPNPYYDPELRPFTGMDKPIQDYLGQQPLAQEMVDDIDHFISRWLPRLQQESRSY VTIAIGCTGGQHRSVYVVEKLAERLKDRYELLVRHRQAQSLAGR >gi|241319676|gb|ACQV01000022.1| GENE 95 110171 - 110407 316 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759689|ref|ZP_04757789.1| ## NR: gi|241759689|ref|ZP_04757789.1| putative lipoprotein [Neisseria flavescens SK114] # 1 78 1 78 78 141 100.0 1e-32 MKKISLTALSLLILTACATEPVTAYRWHRTGASEAEVSRQINTCKSQVQNGTKRGNTSKT FEQCMDEAGYYSYEHGNL >gi|241319676|gb|ACQV01000022.1| GENE 96 110500 - 111441 1191 313 aa, chain + ## HITS:1 COG:NMB0739_1 KEGG:ns NR:ns ## COG: NMB0739_1 COG1161 # Protein_GI_number: 15676637 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 309 1 309 342 585 96.0 1e-167 MAIQWFPGHMNKAKKAIAERIKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ DLADPERTKVWLEHYNSRQDTRAIALDSSETGAHGKITQACRAMIPHRQGIEKPLRVLIC GIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPKIIVEEGG YNLAAGGAVGRNALDEEEVALELLDYLRRHYLALLQERYQADKDPSSHWDDTSWLEWIAK KRGAVLSGGRINYQKAAENILTDFREGKIGRITLETPNQWETWLKKARQKEAELKAIREA RKAERKGQQSSAE >gi|241319676|gb|ACQV01000022.1| GENE 97 111497 - 112090 892 197 aa, chain - ## HITS:1 COG:no KEGG:D11S_0531 NR:ns ## KEGG: D11S_0531 # Name: not_defined # Def: outer membrane lipoprotein carrier protein LolA # Organism: A.actinomycetemcomitans # Pathway: not_defined # 3 197 2 193 194 191 54.0 2e-47 MKKTILSLTLLISAPALWAFSPAELAQTLQKPQNVQGNFVQQRQLKSLSKPMTTSGSFTL VPQKGLLWKMQKPFETTLRVRSDGIMQWNGSQWVNPNASKLNGQSRQIKLFLDLLGGNTQ GLEKQFDLKLNGNEKKWTLTLTPKTAITRQIFNRIEINGDTLVRKIELDEKQGDKTIMQF NQIQTDKTLDSFSRTAL >gi|241319676|gb|ACQV01000022.1| GENE 98 112149 - 114371 3616 740 aa, chain - ## HITS:1 COG:NMB0920 KEGG:ns NR:ns ## COG: NMB0920 COG2838 # Protein_GI_number: 15676815 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Neisseria meningitidis MC58 # 3 740 4 741 741 1377 97.0 0 MTKSTIIYTYTDEAPALATQSLLPIVQAFTRHADIDVKTSDISLSGRILAAFPEYLTEAQ RVPDALTELGELVKQPDANVIKLPNISASVPQLTAAIKELQSKGFAVPDYPADPQTDEEK AVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKHPHSMGAWTKDSKTHVATMQSGD FFHNEQSVTVPEATSVSIVFTDKQGNKKELREPVALKAGEIIDATVMSKKALLAFLAEQV KDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFFAPVFEKFGDKLAAAGVNVNNGFGNL LANLDKLDADTRAAVEAEIAAIYATNPDLAMVDSDKGITNLHVPSDVIVDASMPAMIRNS GRMWDKDGKAQDTKAVIPDSSYAGVYQATIDFCREHGAFDPTTMGTVPNVGLMAQAAEEY GSHNKTFEIEADGQVQVIDAAGNVLMQHDVEAGDIWRMCQTKDAPVKDWVQLAVNRARLS NTPAVFWLDENRPHDKSLLAKVKAYLAELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTIS VTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLR WDSLGEFLALAVSFEHLAQKTGNAKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSH FYLTLYWAQELAAQDKDAELKAAFAPLAAALTADEAKIVEELSAVQGKAVDIGGYYAANP EKAAQAMRPSATFNQALSAL >gi|241319676|gb|ACQV01000022.1| GENE 99 114545 - 115747 1191 400 aa, chain - ## HITS:1 COG:ECs4338 KEGG:ns NR:ns ## COG: ECs4338 COG0304 # Protein_GI_number: 15833592 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 5 400 2 386 389 268 43.0 2e-71 MNTPVYLSRPALTSALGSGLQIHADALLRPSENTPLTFSDQWVKGKTHAFGAVKETLMPL PDNIPEAHRSRNNQLILHALSQIDGLIQTAIARYGKERVAVVTGTSTSGADENIPLFQHV VQGGEWTDVPFKQLQHTMVSPSEFIAQVYGLDGLRYTVSTACTSGARALISAARLLRAGL CDAVICGGADTLSALTINGFASLEVLSDGIAKPFSANRNGINIGEAAAFFVMTRDADFDG EMQLLGYGASSDAYHMSSPRPDGLGAAQSFQAALDKAGLKAEDIGWINLHGTGTQHNDSM ESRAVAEVFGSHTLCTSTKPSTGHTLGAAGAIEAAFAWLMANCQYNPEGKLPPQQWDNVP DSGLPNIALTDENSRWPSEKRIAASSSFAFGGSNAVLIIG >gi|241319676|gb|ACQV01000022.1| GENE 100 115751 - 116269 613 172 aa, chain - ## HITS:1 COG:no KEGG:D11S_0529 NR:ns ## KEGG: D11S_0529 # Name: not_defined # Def: lipoprotein, putative # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 169 31 188 189 97 34.0 2e-19 MRFIPLLAALLLPACTTSLPHPQTLPPLSKEGQWFKLEQTNAAGQTVQTNLLAVEPHSDG IRFVQTDALGAPVSRQSVSTKGWKNDGFVMPNAASRRLFAALLPLLAAEHAATLYPEARQ QNATHQGFCPDGKGAVFSYRERDLWCVAHHSEQFLIGFPDQTFWTVSPIAED >gi|241319676|gb|ACQV01000022.1| GENE 101 116361 - 117599 1572 412 aa, chain - ## HITS:1 COG:RSp0354 KEGG:ns NR:ns ## COG: RSp0354 COG0644 # Protein_GI_number: 17548575 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Ralstonia solanacearum # 6 402 15 410 419 389 52.0 1e-108 MSVEFDVAVIGAGPSGSVASALLNKQGFKVCVLEKQHFPRFVIGESLLPHCMEMLEEAGF ADAVHAEPSFQFKDGAAFSWGSRYTDFNFTEKFSDGPGTIYQVRRGIFDKILIDEAAKQG IDVRFGHGVTAFDNSGDVARLSVATDTGENYELTAKFVLDASGYGRVLPRLLNLESPSEL PPRQAHFTHIDDNITSPKFDRNKILINTHPEHRDVWIWLIPFGDNRCSIGVVGTPDKLAG ESEAVLKKFVYECPMLAEILDKAVWENDFPFRSIQGYSANVKTLYGKHFALLGNAAEFLD PVFSSGVTIALHSAKLAADLLGKQLKGEAVDWQTEFADQLMIGVNAFRTYVNGWYDFRFQ NAIYAPNRSPEISRMISSILAGYAWDTNNPFVEKSEQRLSTLAALVGDLKVE >gi|241319676|gb|ACQV01000022.1| GENE 102 117734 - 120052 2396 772 aa, chain - ## HITS:1 COG:RSp0362 KEGG:ns NR:ns ## COG: RSp0362 COG4258 # Protein_GI_number: 17548583 # Func_class: R General function prediction only # Function: Predicted exporter # Organism: Ralstonia solanacearum # 9 766 21 793 805 192 27.0 2e-48 MNLRLLNRLYTALILFLTLFLVYAFASQARIQTDLTALLPSEQQPDALLTAADKAAEAQL NSQVILLAGSTDAETAFQTASQIADAWRKSGVFEQVDSSMTPNLDKVRADMQKLSLAVLP QDEIRQLFEQPQAYFQARAEAAANPFAAPSPLSLEQDWLGFGRFVADKANPQSRLQWDMD NGMLFAEDKGKTWVFLRGRLAGGDQFSGNDALLPLMTQSRQIASENGAETLSAGGALFAA VSKAAAEKESRLMSMVGLGLTFALLLWVFRSGRVFLLSLPLAAGMLTGLAVALLTFGEVH ILTIVIGTSLVGMLVDFPLHWLAPSVFGPSEKTVWQAESAMKHVLPSFAVSLTITVLGYA LLWFTPLPVLRQTAVFSGFALFGAFGATVLWLPPLFRRYRAKTVPFAALTEKLYSLSGRL KNRLHKRGWLIVGGILLAVGLWRSDWRDDIRQWVNMPTAMLTEVQQIGQLSGTDFGGKYL VAEAQSEDALLKKTAELGRALQPLIAQGKLSGIQSPDQFILPTTEQQKLQNRLRELTKLP DSWKPLTEIGIPRKTVRDALLQAANTQPLSLSDGLNTDLAEAWRSLYLGEVEPGRFAAVV RLNGMTDETAVRAVAQHVSGVHWADKRAHLNELFHHTRNQAAWLKLASYALAWLLLWKMF GFKRGSKILAVPLAAAICTVAVLGLAGIPVSLFAMFGLLLVSAIGVDYAVYAATAHHSAP AKLGGMLLAAATTAISFALLAISSTPAVAAFGMTVTIGVAFNIWLAGTLLKN >gi|241319676|gb|ACQV01000022.1| GENE 103 120146 - 120763 191 205 aa, chain - ## HITS:1 COG:no KEGG:DNO_0905 NR:ns ## KEGG: DNO_0905 # Name: not_defined # Def: 4'-phosphopantetheinyl transferase domain-containing protein # Organism: D.nodosus # Pathway: not_defined # 9 180 7 180 219 99 35.0 1e-19 MDTTPLQCLLADPSFAACYDHASLNAADSRRLATTPQLAQRQDWQVSRALKQQTDLATVS LSHSQGFAALLCAPQSLTAGVDIEFIRPRDFKALSALVCTQEEQNYLETANWPSETFYRL WCFKEALIKATNLDFPSDMKLVGYVFDSGQLVGLRAGKQTDWYGTSAILADTMALACVWK GKAVALQWQFFGSLKPNDLTDRQTI >gi|241319676|gb|ACQV01000022.1| GENE 104 120816 - 121328 628 170 aa, chain - ## HITS:1 COG:no KEGG:NMO_1485 NR:ns ## KEGG: NMO_1485 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 14 168 1 155 158 73 33.0 2e-12 MLRFSALVAVSALMLAACSQSGNSQPSTSSSQTSTQKTTAAGSACRSMGEGHKVNGKGQN DIYMCKVDVALNSAEAKSALNPSIRVHYGSTSGATLTSRQISNSVGKTPDETCQRAFLSA VKRFQSTALRKKAKSVHLVSYFDKVTKGGNEYECHIATFNSRVVLKGSFH >gi|241319676|gb|ACQV01000022.1| GENE 105 121701 - 122261 372 186 aa, chain + ## HITS:1 COG:NMB1496 KEGG:ns NR:ns ## COG: NMB1496 COG1187 # Protein_GI_number: 15677349 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 186 1 186 186 301 74.0 6e-82 MNDLIILNKPYGVICQFSAHEKHQCLKDFVEKPGFYPAGRLDTDSEGLLLLTNNGRLQAQ IADPKFKQIKTYWAQVEGSPDEAKLDLLRRGVDLGDFVTHPAEVRVLEEGEADVLWPRVP PIRVRKSVPDFWVEIKISEGKNRQVRRMTAKAGFPCLRLVRVAIGRLNLFDLNLELGQWQ FAPHRP >gi|241319676|gb|ACQV01000022.1| GENE 106 122316 - 123122 1086 268 aa, chain - ## HITS:1 COG:NMB1475 KEGG:ns NR:ns ## COG: NMB1475 COG5266 # Protein_GI_number: 15677329 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 268 1 268 268 500 90.0 1e-141 MKKTALLIASAFLFSTAAHAHRVWVETAHTHGGEYLEAELGYGEFPELEPIAKDRLHIFS KPMQLVTEKGKENMIQKGTYNYQYRSKLPVKDGSYLVTAEYQPTFWSKNSAGWKQASIKE MPDASYCEQTRMFGKNIVNVGHESADTAIITKQVGQHLEIVPLDNPANVHVGERFKVRVL FNGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTTDDKGEVSIIPLRQGFWKASVEH KADFPDQSVCQKQANYTTLTFQIGHSHH >gi|241319676|gb|ACQV01000022.1| GENE 107 123273 - 124649 1899 458 aa, chain - ## HITS:1 COG:NMB0782 KEGG:ns NR:ns ## COG: NMB0782 COG1066 # Protein_GI_number: 15676680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Neisseria meningitidis MC58 # 1 456 1 456 459 888 98.0 0 MAKAPKTIYQCSECGGTSPKWQGKCPHCGEWNTLQESLAAPEPKNARFQSWAADTSTVQS LSTVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIGKSTLLLQTIAKMAQSRKV LYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTALKQHQPEVVVIDSIQTMYSD QITSAPGSVSQVRECAAQLTRMAKQMSIAMILVGHVTKDGAIAGPRVLEHMVDTVLYFEG DQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVSNPSAIFLASYRDDTPGSCVLVTQE GSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLAMLLAVLNRHGGIACFDQDVFLNAVGG VKIGEPAADLAVILAMLSSFRNRPMPEKTVVFGEIGLSGEVRPVARGQERLKEAEKLGFK RAIVPKANMPRNAKEFPNLKIYGVSSLQEAIDVCRDVD >gi|241319676|gb|ACQV01000022.1| GENE 108 124745 - 126217 2578 490 aa, chain - ## HITS:1 COG:NMA1546 KEGG:ns NR:ns ## COG: NMA1546 COG0793 # Protein_GI_number: 15794439 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Neisseria meningitidis Z2491 # 3 478 2 481 494 716 83.0 0 MSTKSTLKKVAIYTLGAFSGITLSLSVQSFAAEKDKKDNEALPVQTIRTMAEVYGQIKAN YYQDKPDAELFEGAMKGMVSDLDPHSEYMDKKGYAEMKESTSGEFGGLGMEIGQEDGFVK VVAPIEDTPAERAGVKSGDFIVKIDNTSTRGLTVSEAVKKMRGKPGTKITLTLSRKNADK PIVVNLTRAIIKVKSVRHHLLEKDYGYIRVSQFQERTVAALNEAAQALVKENKGPLKGII LDLRDDPGGLLNGAVGVSAAFLQPDVTVVSTKGRNKKEGMVLKATAEDYITTSGKDPLAG LPAELKTIPMTVLINAGSASASEIVAGALQDHKRAVVVGTQSFGKGSVQTLIPLSGGSAV KLTTALYYTPNDRSIQAQGIVPDVEVKDKDRAFESREADLVGHIGNPLGGQDVNSSTETP ANAETKADKDKSKKDKDEDISSRRIPNPAKDDQLRKALDLVKNPAEWQKSLGLAAKKPAP KKDADKDSKK >gi|241319676|gb|ACQV01000022.1| GENE 109 126433 - 128307 2701 624 aa, chain - ## HITS:1 COG:NMA1547_2 KEGG:ns NR:ns ## COG: NMA1547_2 COG4942 # Protein_GI_number: 15794440 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Neisseria meningitidis Z2491 # 265 623 1 355 356 367 64.0 1e-101 MRYKPLILALLLSFSLPTYAAKDAPKEKAATVKKAAPVKKEKEAAKADVKKETSKKQAVK EKEEDKKAVKAKASKEKETADKNERASAKNKTAKAAEANADNKKASRKAEEPKETAKDKK AAAAKSGKAKEQDKKPAEDKKDSKAKEPAKKAAEDKKDGKKTKEPVKKAAEDKKADAKEA KETANKAVEDKKDAKKNTKAKEQNKKAEPKVEPKAASSAENDFKAAVTAAANDMETKKSF AKRNEGFIIHVNATLKQLQQTRNNLSGINRKQRDAWEKFQKLNADANQLKAEVSNTRAQI SRFVSGNYKNSQPNAVALFLKNADAGQKTRFLRYTRYINNANDQVMRDLEKQQKELAAQE QKINNELAYLKKLQANIQASLRQQGITNTAEQAESRRQNAQMAKEAQKKINHRENEQRLN NLLKDLEKRKAEQRKAEAEARKKAAEARLAAAEKARKEQAAAQQKAEAERAAMSTLTDED MKLQAPNTQGFTVSNANSFSRMQGRLKKPVNGTLAGLFGQDRGDGEVWKGVFYNTVPTPV SSIASGTVTFAGELEGYGKVVVLDHGDGYVSIYSGLNEIDTAQNYAVNAGSKIGTSGTLP SGETGLYLEVRYNGQVMNPLSWIN >gi|241319676|gb|ACQV01000022.1| GENE 110 128515 - 129027 557 170 aa, chain + ## HITS:1 COG:NMB1335 KEGG:ns NR:ns ## COG: NMB1335 COG3045 # Protein_GI_number: 15677201 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 6 170 16 185 186 227 70.0 8e-60 MVLAACGDNTDKIGRASTVFHMLGKNDRIEVEGFDDPDVQGVACYISYAKKGGLKETVNL EEDASDASVSCVQSAEVIRYNESAVLKPRQVFKRSASIAFKSQQIIRYYDPKRKSFAYLV YSDKIVQGSPKNSLSAVSCFAHAKTDTPIPAGGAVYGACVVDAPVADGQK >gi|241319676|gb|ACQV01000022.1| GENE 111 129055 - 129603 839 182 aa, chain + ## HITS:1 COG:NMB1336 KEGG:ns NR:ns ## COG: NMB1336 COG1678 # Protein_GI_number: 15677202 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 182 1 182 182 309 76.0 2e-84 MNLANHFLIAMPHMDDPFFTDTVIYVCEHDEEGALGIIINKPSPITMDMIFAAADRNIPL RLQHENVMMGGPVQIERGYVVHTPIGRWQNSMVVTDNVALTSSRDVIENLSKEGAVDKAL ISIGYSKWGKGQLERELAENVWLTVPADEHILFDVPYELRYTAAFEKLGVNPNALISGVG HA >gi|241319676|gb|ACQV01000022.1| GENE 112 129596 - 130051 458 151 aa, chain + ## HITS:1 COG:NMA1551 KEGG:ns NR:ns ## COG: NMA1551 COG0816 # Protein_GI_number: 15794444 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Neisseria meningitidis Z2491 # 1 150 1 150 151 257 83.0 5e-69 MPDAPKGTVLAFDFGETRIGVVQGDAELGMTHPLATVTGNSNDEKFEAIAKLVKEWQPKY FVVGLPTHTDGTEHELTRLSRKFGRRLHGRFNLPVYWVDERMSSLYAESLLAEAQVFGRK QKSVLDQVAAQAILQGFFEGGAAEYFNGREE >gi|241319676|gb|ACQV01000022.1| GENE 113 130216 - 130638 808 140 aa, chain + ## HITS:1 COG:ECs4633 KEGG:ns NR:ns ## COG: ECs4633 COG3753 # Protein_GI_number: 15833887 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 32 117 26 111 135 75 47.0 3e-14 MALMDNLLNAATQMLGGNSENGAQGSLTDMAMDLVKQQGGVGNLINQLQQGGLGDALSSW VSNQSSNLPVSGSDLQNALGSDTVNQIAQKFGVDAGQAGDLLAKVLPDLVDKATPNGTAQ DADGFGLDDIASMLLKNFMK >gi|241319676|gb|ACQV01000022.1| GENE 114 130788 - 131336 1004 182 aa, chain + ## HITS:1 COG:NMB0995 KEGG:ns NR:ns ## COG: NMB0995 COG2128 # Protein_GI_number: 15676886 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 182 46 227 227 301 91.0 3e-82 MSRLTIHTVETAPEAAKPRIEAVLKNNGFIPNLIGVLANAPEALAFYQEVGKLNAANSLT DGEVEVVQIIAARTNECGFCVAGHTKLATLKKLLSEQSIKAARALAAGEFDDAKLGALAT FTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALATLCNYVNNLAKTEINPELQA FA >gi|241319676|gb|ACQV01000022.1| GENE 115 131462 - 132553 1709 363 aa, chain + ## HITS:1 COG:NMA1202 KEGG:ns NR:ns ## COG: NMA1202 COG1960 # Protein_GI_number: 15794146 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 363 1 363 363 610 84.0 1e-174 MTRKALLNNVAELVKSKLKPLVDDIDRKGLYPKEFMLELGKIGGFAATGTVEEGGNGLGL ATQIAVLREIGKECGATSFSAWCQAACAWYLHQSPNQAVKDKYLADILQGKVLAGTGMSN TVKHLAGIEKHNLQAERVEGGYKVNGALPWVSNIGEDHIWANTAQVGDSYVMFITGGQWE GVTLQDCPEFCGLEGTRTYSLNFKDVFIPDEDVIASPEQFQSYIPTIKAGFILLQIGIGA GVIDGALGIIRMANVVNAEVNSYLDHSYDDLKAALDGAWAETERLADDAWNNKPDTLATL KLREAAAVLALNATQSAALHAGAKGYLMRSPAQRRVREAMFVAIVTPAIKHLRKEIAALE AAQ >gi|241319676|gb|ACQV01000022.1| GENE 116 132638 - 132808 368 56 aa, chain + ## HITS:1 COG:NMA1201 KEGG:ns NR:ns ## COG: NMA1201 COG1773 # Protein_GI_number: 15794145 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Neisseria meningitidis Z2491 # 1 56 1 56 56 99 91.0 2e-21 MAQYMCGPCGWIYDEDLGDPEHGLPAGTKFEDIPDDWKCPECGVGKEDFYLLDFVI >gi|241319676|gb|ACQV01000022.1| GENE 117 132856 - 134046 1653 396 aa, chain - ## HITS:1 COG:NMB0894 KEGG:ns NR:ns ## COG: NMB0894 COG0436 # Protein_GI_number: 15676790 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 395 1 395 395 726 85.0 0 MNPLLNHLKPYPFARLREAMQGIDAPEGVTPIHLQIGEPKHPTPKVITDALTASLHELEK YPLTAGLPELRQACAEWVARRYDGLSLNPDNEILPVLGSREALFSFIQTVLNPASDGPKP VVISPNPFYQIYEGATILGGGEIHFANCPAPSFNPDWSSLPEDVWQRTKVLIVCSPNNPS GSVLQLEDWKEIFDLQDKYGFVIASDECYSEIYFDGNKPIGGLQAAAQLGRGTRNIIMFT SLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWNDEEHVIDNRR LYQEKFDRVIPILQQAFDVKLPDASFYIWLKVPNGDDLAFTRNLWQKAAIQVLPGRFLAR DTEQGNPGEGYVRIALVADVESCVKAAETMVALYRR >gi|241319676|gb|ACQV01000022.1| GENE 118 134209 - 134415 91 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576054|ref|ZP_06394140.1| ## NR: gi|288576054|ref|ZP_06394140.1| hypothetical protein NEIMUCOT_05597 [Neisseria mucosa ATCC 25996] # 1 68 1 68 68 95 92.0 1e-18 MVGFVGDEGVFAVFGHGFGLGMFECADAAFLIGAYPSSQVGSGNAVVVCGTLLAAYVQVV EYGLVFEV >gi|241319676|gb|ACQV01000022.1| GENE 119 134368 - 134544 268 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 58 309 366 366 103 89.0 4e-21 MTEHRKNPFIADKPDHEKTQAELIEELCHMRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241319676|gb|ACQV01000022.1| GENE 120 134747 - 135343 563 198 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 193 20 213 216 190 51.0 2e-48 MRQLGLKAKIRAKKAYRHPAMGKISEHLLKRLFTAKKPNKKWLTDVTELKGSDGKLYLSP ILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAE HSMIQSMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQIDDYMDYYNRERCSL KLKKLSPVAYRTQLAQSA >gi|241319676|gb|ACQV01000022.1| GENE 121 135429 - 136601 1811 390 aa, chain - ## HITS:1 COG:NMA1666 KEGG:ns NR:ns ## COG: NMA1666 COG2070 # Protein_GI_number: 15794560 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Neisseria meningitidis Z2491 # 1 385 1 385 391 707 91.0 0 MQNNFDPLIIRGKSLIPVVQGGMGVGVSASKLSSAVARENGVGTIASVDLRHLHEDLLAE SKINSSEEKYTRLNCIALDREIKKAKADSEGKGMIAVNVMKAVKDHTAYVRQACESGADA IVMGAGLPLDLPEMAEGYHKDVALFPILSESRGINIVLKRWMKKGILPDAIVIEHPAHAA GHLGAATVDGVNDAKFEFKRVIEETFEVFKNLGLESEKIPLVLAGGMANFEKVKTALKNW GASAVQIGTAFAVTEEGDAHINFKKTLAGAETEKVVEFMSVAGLPARGVRTKFLDSYIKR EAKLQANAKNDPRRCTQGLNCLTSCGLRDGLAKAGQFCIDIQLSAAFRGEVDKGLFFRGK DPLPFGNAIRTVQETIHYLLNGSLPAVPAK >gi|241319676|gb|ACQV01000022.1| GENE 122 136942 - 137622 204 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 109 210 243 344 347 83 37 1e-14 MKFLKPLTVIATAIPLALTGCVTDPATGQQSASKTAMYGLGGAAVCGIVGALTHGGKGAR NSALACGAVGAGIGGYMDYQEKKLRQSLANTNIEVERQGNQIKLVMPENVTFATGSAALS GQAQSALSVAAQTLVQYPDTTLTINGHTDNTGNDAINEPLSRNRAESVAIFLQSRGVSST RLSTFGYGSRQPIASNATVEGRAQNRRVEILINPDQRAIDAAKKQM >gi|241319676|gb|ACQV01000022.1| GENE 123 137843 - 138577 820 244 aa, chain - ## HITS:1 COG:no KEGG:CV_0489 NR:ns ## KEGG: CV_0489 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 1 225 53 272 293 164 48.0 3e-39 MAFLAGAINAGGYFAFSRYTSHVTGSMSLLADVLYLQEWSVAIIATISVLCFVAGAAHSG WVILWTQQMRFRGSFGFSMWLEAVYLLIFGLFGIAAMEWDFGGPDFIMPSLALFLLCFIM GMHNTVITLLSGSAIRSTHMTGTATDLGIEISRALYYSKQHHPRLPHVRVNKPKMWLLSG LMLSFLLGGIVGVWGYHLVGHHFALPVSAVLFILGAGSVGYDVKVRLKWTFVSWYRRKKE KRKK >gi|241319676|gb|ACQV01000022.1| GENE 124 138877 - 139266 714 129 aa, chain + ## HITS:1 COG:no KEGG:APL_0356 NR:ns ## KEGG: APL_0356 # Name: not_defined # Def: hypothetical protein # Organism: A.pleuropneumoniae # Pathway: not_defined # 1 127 1 121 128 79 43.0 5e-14 MNPIRLTLMIGVAALLAACATTPEQKAARAQAQKRYEQDLQVNLAAQCDQETATLIRRKF DEEGKPGVATAEQKAFRLKYIDKVSDPMFQACYKMAWQNYISQEQLREARYYRYYDDWGY PFGRYPWWW >gi|241319676|gb|ACQV01000022.1| GENE 125 139388 - 140314 382 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 18 306 19 311 317 151 33 2e-35 MNIWLGQRHAPKFPQGAAVTIGNFDGVHLGHKHILQKLKREADQRGLPVVVVVFEPQPKE FFARKAGKKLPYRISPLRTKLRLLRETGCVDAVWVLRFNQAFSDMSAQAFIDQLLRQTLN TRYLLIGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVEDIRTSSTAVRQALSDGRLEY AKKLLGHDYVLSGKVKHGQKLGRTINAPTANVQLPPYHYALSGVFVVEADGTFGTRRGVA SFGFNPTVSNNRSQKLEVHLFDFNGDLYGQRIFVRFLHKLRDEKKFESIEALKTQILQDM EDARVWEA >gi|241319676|gb|ACQV01000022.1| GENE 126 140454 - 143243 3787 929 aa, chain + ## HITS:1 COG:NMA0622 KEGG:ns NR:ns ## COG: NMA0622 COG0060 # Protein_GI_number: 15793612 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 929 1 929 929 1859 95.0 0 MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREIAKGRPKFILHDGPPYA NGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPIEVMVEKLHGKDMPKARFR ELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEADTVRMLGEIYKSGYLYRGAK PVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAALAAAFGLSGIEGKAFAVIWTTT PWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAEDALKRYGFSDGIAILAETTGDKLE NLHMNHPFLERDIPMLNGDHVTTDAGTGLVHTAPAHGLEDYAVCNKYGIELYNPVNAEGK YISETPRVAGMSVWEANPVILQWLEETGNLLASSKIEHSYAHCWRHKTPLIYRATGQWFV GMDKAGSDGKTLRDKAIKAVDDTEFFPSWGRARLEAMIEGRPDWVVSRQRYWGTPMTFFV HKETGELHPNSAELLEKVAQKIEGKGIEAWFSLDKSELLSAEDCENYDKLSDTMDVWFDS GSTHYSVVKQREELEWPADLYLEGSDQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVD QNGRKMSKSIGNVVAPQEVYNEFGADILRLWAASTDYSGELAISKEILKRVTESYRRIRN TLSFLFANLSDFNPIEDAVQQADMVEIDRYAVVLARQLQERLAGDYYPRYAFHFSVKDIV SFCSEDLGAFYLDILKDRLYTTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWD IIGGGEEDSVLFHTWHEFPSINEKAEAELVKKWTAVREAREAVTAAIEPLRTDKTVGSSL QAEAEITAPEEIADYLNTLGEELRFALLVSKAEVKVGDELAVTAKASDGEKCERCWHYTH DVGVVAGHETICKRCADNVDGKGEDRHYA >gi|241319676|gb|ACQV01000022.1| GENE 127 143551 - 143925 312 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261380482|ref|ZP_05985055.1| ## NR: gi|261380482|ref|ZP_05985055.1| hypothetical protein NEISUBOT_04482 [Neisseria subflava NJ9703] # 1 124 1 124 124 227 97.0 2e-58 MRPKDKFDIKACKKIKDCNDEELIEMGEWLSGWLGDANFPVFSEIVEIFVERQDILLPFV SNIFYSNDSICIYWVLLELYPKLSYQNQVALTIDLEHCLHNISEKLTLDEDDENLKEILE KVLN >gi|241319676|gb|ACQV01000022.1| GENE 128 144135 - 144542 563 135 aa, chain - ## HITS:1 COG:no KEGG:NGO1063 NR:ns ## KEGG: NGO1063 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 135 1 126 126 130 52.0 1e-29 MKVKALLAIATAMSLAACAAPEAHRHDHGQHHEHNHAHEHGHQHHDMHSHDRVQSFSCEN GLSVQVRNLSTNQVELRLDDKVATLSSAVAGSGERYVANQGLFGKGAEWHQKGSEAFFGF TDPYGNKVETSCSAR >gi|241319676|gb|ACQV01000022.1| GENE 129 144784 - 144909 211 41 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225075655|ref|ZP_03718854.1| hypothetical protein NEIFLAOT_00671 [Neisseria flavescens NRL30031/H210] # 1 41 1 41 41 85 100 2e-15 MQVLSSLKTAKKRHRDCQIVRRKGKVYVICKSNPRFKARQR >gi|241319676|gb|ACQV01000022.1| GENE 130 144909 - 145184 493 91 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241759775|ref|ZP_04757875.1| ribosomal protein L31 [Neisseria flavescens SK114] # 1 91 1 91 91 194 100 3e-48 MKPDIHPDNYRTVLFYDSGADQGWLIRSCANAHGKTMVWKDGVEYPLFSLDTSSASHPVY TGKQRNVNVEGRASKFNQRYQSMMSSFRKDK >gi|241319676|gb|ACQV01000022.1| GENE 131 145359 - 146852 1406 497 aa, chain + ## HITS:1 COG:NMB0661_2 KEGG:ns NR:ns ## COG: NMB0661_2 COG0168 # Protein_GI_number: 15677999 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Neisseria meningitidis MC58 # 15 497 1 483 483 642 71.0 0 MYLYKGFRLGGAVSKVMPIIHVLSKLGLLFSLLLAVPTLMSYFYHDSAFIVFAYTALTVL LVSCVTWVLTLRFNRELRPRDGFTLVLMLWLAFAIVAAMPIYFYMPSMSFTDAFFEAMSG LTTTGATVISGLDTLDPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQLFKAEIPGM DKESKMAPRISQVAKRLWFAYALTTAAAFVSLHIAGMGWFDALCHAMSAVALGGFSTHDD SVAYFDSVAVEWTLMFFTVWGGINFASHFTALGNRSLQVYWKDEECRSMLLVLSGSILIS ALYLWQQDVYQSLGEALRFVSFNFVSIGLASGFSNADFAQWPLIVSLWMFFLSNVLASSG SMGGGIKNVRALVLFKFSLREMLILLHPRAVRTVKVNNRSIPDRMALTVMSFIFIYFMTV IVFSFLLMAAGLDFLSAFTAVIACITNAGPGLGAVGPSHNYAALSDVQKWLCTAVMLLGR LEIFTVLILLTPAYWKK >gi|241319676|gb|ACQV01000022.1| GENE 132 146907 - 147770 1344 287 aa, chain - ## HITS:1 COG:NMB0638 KEGG:ns NR:ns ## COG: NMB0638 COG1210 # Protein_GI_number: 15676538 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 286 1 286 289 522 89.0 1e-148 MKPIKKCVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEEAVEAGCTEMVFITGRN KRSIEDHFDKAYELETELELRQKDKLLAHVRDILPPNITCLYIRQTEALGLGHAVLCAQA AVGDEPFAVILADDLIDAPKGALKQMVDVYNQSGNSVLGVETVDPSQTGSYGIVEVEKLK SYQRITNIVEKPKPEEAPSNLAVVGRYILTPRIFDLLTNLPRGAGNEIQLTDGIARLLDH EFVLAHAFDGKRYDCGSKLGYLEATVAYGLKHPETGEQFKELLKQYA >gi|241319676|gb|ACQV01000022.1| GENE 133 147890 - 150358 3001 822 aa, chain - ## HITS:1 COG:NMB0666 KEGG:ns NR:ns ## COG: NMB0666 COG0272 # Protein_GI_number: 15676564 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Neisseria meningitidis MC58 # 5 822 27 841 841 1389 86.0 0 MNPTAQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQ RVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGLNGEKPEYVI EPKFDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIRG EVLMLKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQG GFIAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVKV NSLAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGV TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQDD LFAETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHFA SRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASANEEEPSNSEI EDFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKTLA QAFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGVAPQSQAVT IPPLRHAEPQRWIARLPDFKISETKALALWELAGQSIEGLQTDKALPADWQTWRNKPQNA TLLENMKTFFAQTRSNLQDETISDGINEAVAGKTFVLTGTLPTLKRDQAQAMIEAAGGKV SGSVSKKTDYVVAGEAAGSKLEKAQTLGVAVLTEEELLTLLG >gi|241319676|gb|ACQV01000022.1| GENE 134 150417 - 150572 142 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNIEDEGILPEKSGYAVIAYPLFDWGSLREQAQGLFTAGFDADFKHFFLTG >gi|241319676|gb|ACQV01000022.1| GENE 135 150498 - 151766 1849 422 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0620 NR:ns ## KEGG: NMCC_0620 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 422 4 431 431 535 63.0 1e-150 MIFIVLALAALLAVIGYNMYQENQYRKQVREQFGHSDKDALLTSKTKHVRDSKETGGQGL FIKKNKKTEEALRNLQEQDEIYAAKAKLAHPTQIKTDVELTVEDDFSAEEKVQHTVIGLN NEITVSPAEAASAPVETATEPVAQVPLISLDELSQVELPWFDPRFDYMAYISLKQAQELH ALPRLSGTHRFQIIGCTMDDHFRVAEPIPGVYYQGFVMGLQAVSRNGLAAREELQHFDQQ VDAFAQLMDGKVLHTDLDAFTEVAQALDQFCARVDQTIAIHLVSHSNISGVELRAAVEDT GFKLGEDGAFHFGDNNNPQLFSIHTLDNKPFTNPLLDNQAYRGFSMLLDIPHVPAREKTF DKFMDLAVKLSGQLSLDLVNDQMEEVSTQWLKDVRNYVLARQEEMLKVGIKPGSKQALRL FS >gi|241319676|gb|ACQV01000022.1| GENE 136 151944 - 152510 403 188 aa, chain - ## HITS:1 COG:NMB0668 KEGG:ns NR:ns ## COG: NMB0668 COG3023 # Protein_GI_number: 15676566 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Neisseria meningitidis MC58 # 1 187 1 187 190 289 73.0 3e-78 MNSPSKNIWQNGRWLNARQTHSPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTN QINPDEHPFFSIIHTLRVSSHFFISRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIG IELEGCDFEPFTEAQYTSLQALLTAISEHYPIQAVTGHQDIAPDRKTDPGHFFDWPRLQK AGFPVRRG >gi|241319676|gb|ACQV01000022.1| GENE 137 152626 - 153621 1222 331 aa, chain + ## HITS:1 COG:NMA0868 KEGG:ns NR:ns ## COG: NMA0868 COG1559 # Protein_GI_number: 15793837 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Neisseria meningitidis Z2491 # 1 331 1 331 331 544 79.0 1e-154 MLKKLLKWLAVFLTAFAAVVAALLFVPKDNGKPYRITITKNQGISSVSRKLAQDGIVYNR YVLVAAAYVMGVHNQLNAGSYRLFSKVSAWDILKRIKKGRPDSVSVQILEGARFAQMRRI IDNTADIAHDTRGWSDEKLMAEVAPDALSSNPEGQFFPDSYEIDAGGSDLQIYKIAYRKM RENLQEAWDDRQSGLPYKNPYEMLIMASLIEKETAHEDDRAHVAAVFVNRLNIGMRLQTD PTVIYGMGDAYKGRIRKADLQRDTPYNTYTRSGLPPTPIALPGKAALEAAGHPSDEKYLY FVSKMDGTGLSEFSHNLSEHNAAVRKYILKK >gi|241319676|gb|ACQV01000022.1| GENE 138 153689 - 154315 870 208 aa, chain + ## HITS:1 COG:NMA0869 KEGG:ns NR:ns ## COG: NMA0869 COG0125 # Protein_GI_number: 15793838 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Neisseria meningitidis Z2491 # 1 205 1 205 206 332 79.0 3e-91 MKPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPVTQV SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH WVQGDFRPDLTLLLDVPLEVSMARINQTREKDRFEQEEAEFFNRVREVYLQRANEQPERY AVIDSSQSLDAVKNQIETALDSHFGLNV >gi|241319676|gb|ACQV01000022.1| GENE 139 154579 - 155859 1741 426 aa, chain + ## HITS:1 COG:NMB0671 KEGG:ns NR:ns ## COG: NMB0671 COG0281 # Protein_GI_number: 15676569 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Neisseria meningitidis MC58 # 1 426 1 426 426 805 96.0 0 MENSLKEAALQFHEFPVPGKISVTPTKSLATSKDLALAYSPGVAAPCMEIHADPQTAYKY TAKGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGVDVFDIEIDEKDPQKLV DIIAALEPTFGGINLEDIKAPECFYVERELRKRCKIPVFHDDQHGTAIITAAAVLNALRF TGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRKNVTVCDSKGVIYKTREDKDRMDESKQ FYAIEDNGQRVLADAVKDKDIFLGLSGANLLTPEMLNTMNEKPIVFAMANPNPEILPPLA KETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGALDVGAITINEEMKRACVYALADLAMEE VTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPRVASATAKAAMESGVATRPIADLDAYAAK LAEWKL >gi|241319676|gb|ACQV01000022.1| GENE 140 156160 - 157503 1520 447 aa, chain - ## HITS:1 COG:NMA1565 KEGG:ns NR:ns ## COG: NMA1565 COG1012 # Protein_GI_number: 15794458 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 447 1 447 447 741 77.0 0 MFHSTHVFTGETIYRRPAQSYTEFTDELNRLQTLQQTFAQSSITERTALLQQFADSLTQN QERLAEMVCEEVGRCLHECRAEISKSIELIRYYVRLAPELLAHKTIATQASLSQVRFEPL GVVLAVMPWNYPVWQILRFAIPALCAGNACAVKPAPSVARISETLFSLVPKGLPLIGAWL SHEDTLKAIEDTDAMAFTGSTHTGRLLAAHAGKHLKKTVLELGGSNPFIILPDADLQRAA IDACYSRFRDAGQSCNAAKRIVVTQDIAEQFIPLFLAECAKLQTGNLKDPNTTLAPLHRQ DLRQTVHEQVQDAIAHGAQCLSGGYIPEGESWFYPATVLDQVNPNCRVWHEEVFGPVAMI LRADNPDHAVALANDTPFGLGACIYTADTANAWQYAERIQAGSVFINRHTSSDLRLPFGG VKASGYGRELSEFGLYEFVNVKTYWQK >gi|241319676|gb|ACQV01000022.1| GENE 141 157583 - 158242 969 219 aa, chain - ## HITS:1 COG:NMA1566 KEGG:ns NR:ns ## COG: NMA1566 COG2095 # Protein_GI_number: 15794459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Neisseria meningitidis Z2491 # 1 217 21 235 237 245 76.0 5e-65 MELGVEIGKLLVAFLVLINPFSALSIYLDLTQNHSTKEKRRIARTAALAVFIVIIVFALS GGILLKVLGISVGSFQVGGGILVLLIAISLMNGNDNPAKPKIDPHSEEHQNAQQVRRNEK AIAVVPIAIPITIGPGGISTVIIYSSAAKNYSDIALIIISGFLVSLICYFILVVAGRISK RLGTTGLTILNRIMGMMLAAISVEIIVAGLKSIFPQLVA >gi|241319676|gb|ACQV01000022.1| GENE 142 158244 - 159392 1334 382 aa, chain - ## HITS:1 COG:HI0031 KEGG:ns NR:ns ## COG: HI0031 COG0772 # Protein_GI_number: 16272006 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Haemophilus influenzae # 18 368 17 366 371 340 52.0 3e-93 MNNTSAWKNFKSTITAPIDPWLFFAMLAIYIMSLFLLYSADGQEFGQLENKTIHTVLGFA LLWIIAVFKPQTAAKVALPIYIVGVLLLIGVEVAGVTVNGSTRWLSLGFTRIQPSEIMKI GIPMTVAWYFQRYEGRLKWIHYIVALVLILVPVVLILKQPDLGTAALIMASGIFVIFFAG LPWKAIFAAIIAFVAALPLLWNYGMHDYQKTRVLTLLDPTKDPLGAGYHIIQSMIAIGSG GVWGKGWLNGTQTHLDYIPESTTDFIFAVFGEEFGLIGNILLLLVYLIILARGLWIAAQA QSLYSRSLAGALTMTFFCYAFVNMGMVSGILPVVGVPLPLVSYGGTATLSIMVVLALLMG IANEHKNRRRNADNDDLTESEE >gi|241319676|gb|ACQV01000022.1| GENE 143 159385 - 161433 2450 682 aa, chain - ## HITS:1 COG:RSc0062 KEGG:ns NR:ns ## COG: RSc0062 COG0768 # Protein_GI_number: 17544781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Ralstonia solanacearum # 29 639 16 635 801 540 45.0 1e-153 MKPTLPRRLSGGQHTKKPSAQAAQADALLRLLVAFILIITFFSILLVRFFYLQVTQHNEF SGQASSNRITLIPTPPVRGEIVDINGVPLAKNYPVFSLEVIPSRIEGKMEDVIEALKKYV DITPTDLKRFKKYRESYRKFENIPLKLRLTDEEAARLSVHLREFKGVEVNSRTFREYPYG KLTSHFLGYIGRISDKDKEMLEEEGLTALYRGSTHIGKSGLEKYYEHQLHGIPGYQEVEK DAYGNIVRVLKNVPSKMGQTLRLGMDIRMQQEADRILGDRRGALVAINPQDGTVLAFVSK PSFDPNLFIDGIDSDTWKMLNDDWKKPLINRVTQGLYPPGSTFKPFMGMALLESGKITQN TIIPAPGAWSIPGSRHIFRDSVRSGHGSANLSKAIQVSSDTFFYRLGYEMGIDKASSYLA QFGFGQKTGIDLPSEYAGVLPSREWKAKRFAKSSDPTAKEWRAGEMVSVSIGQGYNAYTP LQMAHATASLANNGVVYQPHLVKEVLDFGARKITRINPNPERQIPFKADNFEYVKRAMEK VLKPGGTAHRIGGGLAYTMGGKTGTAQVVQIKQGGRYNAAALREQHRDHAWFISFAPLEK PEIAIAVILENGGWGAYAAPLAREMTDFYMLHVKPQQFSDGLESDSAKTETTNKHQPITS IFQSAYGLTPTSPAPQPEVHHE >gi|241319676|gb|ACQV01000022.1| GENE 144 161438 - 161938 486 166 aa, chain - ## HITS:1 COG:RSc0061 KEGG:ns NR:ns ## COG: RSc0061 COG2891 # Protein_GI_number: 17544780 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Ralstonia solanacearum # 1 161 1 159 170 78 32.0 5e-15 MNDFDDSYRAVPLHIMAASLIVMMILDFMPFSFDGFFWLPEMTALMLLYWTLHQPQRAGM GLAFAIGLIVDAATAATLGLHALSYVVMTYFILNRRRQIMLYGHIMQLAAVLAALLLNQA VLTVARLFLNHQVITLQGFVAPFVGALLWPILSQLMLIVTRIYRSR >gi|241319676|gb|ACQV01000022.1| GENE 145 161943 - 162785 1048 280 aa, chain - ## HITS:1 COG:PA4480 KEGG:ns NR:ns ## COG: PA4480 COG1792 # Protein_GI_number: 15599676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Pseudomonas aeruginosa # 26 279 5 260 330 151 35.0 1e-36 MERSSLRFDEAKGPKLLPRFVVYIALAAGLMVADYRFSLMQPVRAAVMPMLYPAQWLANQ PVQLYQYFADLSQSKSELLEQNRQLLEENGRLKIDLQRDKVNTDELRELKKLYGLQQKGI HNVIGAEVISNGKDPLSERLIIGKGSQDGLKVGDAVIDQSGLIGLLTQVHTQSAEIGLIS GGQSIVPIAVSRTGERNLAYGNGNGLDLRYFPTGSDLKPGDVLLTSGLDGTYPAGIPVAT VSKVVRASGTPYYDTQLTPLAALRSSRFVLVLSSAPSSPR >gi|241319676|gb|ACQV01000022.1| GENE 146 162797 - 163834 1160 345 aa, chain - ## HITS:1 COG:RSc0059 KEGG:ns NR:ns ## COG: RSc0059 COG1077 # Protein_GI_number: 17544778 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Ralstonia solanacearum # 1 342 1 345 347 373 60.0 1e-103 MFRLLSRFLSNDIAIDLGTANTLIFVRGKGIVLDEPSMVAIQSGAGNKSKIIAVGTEAKK MQGRAPRNIEIVRPMRDGVIADFVITERMLGMLIKKATEGRSLVPPRVVICVPGGSTQVE RKAILDSAFAAGAASVHLIEEPMAAALGAGLPIEDAAGSMIVDIGGGTTEIGILSLGGMA YSASVRAAGDEFDKSIIHYLRRHRGVLIGEATAEELKKQIGSASGFETETAMRIKGRNLA EGTPKSLAVTSTEIREALSETVNQIIRAVRLALEQAPPELAGDIADRGIMLTGGGALLHG IDTVLADATGLPVGIADQPLNCVAYGAGKALDYIGKWDTVFTENP >gi|241319676|gb|ACQV01000022.1| GENE 147 164059 - 164349 526 96 aa, chain + ## HITS:1 COG:NMA1567 KEGG:ns NR:ns ## COG: NMA1567 COG0721 # Protein_GI_number: 15794460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Neisseria meningitidis Z2491 # 1 96 1 96 96 131 84.0 3e-31 MALSLNDVEKIAKLSRLTLTDEEKNKTLAELNDIFAMVENMQSVNTDGIEPMAHPHEAAL RLREDKVTETDHAAEYQAVAPEVRNRLYIVPQVIEE >gi|241319676|gb|ACQV01000022.1| GENE 148 164561 - 166009 466 482 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 8 471 11 452 468 184 33 4e-45 MTAYTLKQASSLLQSKQISAVELATEYLAAIAAKNPAINGYVTIDQDKTLAEAKAADARI AAGNTTALTGVPVAYKDIFCQTGWRSACSSKMLDNFVSPYTATVVQNLLDAGMVTLGRTN MDEFAMGSTNETSFYGATKNPWNLEHVPGGSSGGSAAVIAARLAPVALGSDTGGSIRQPA SHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMASFDERDSTSLER DKEDYTRDLDKPLKGLKIGLPKEYFDEGADTDVQTALQSVIDLLKAQGAETVEVSLPQTS LSIPAYYVLASAEASTNLSRFDGVRYGHRAAQFSDLEEMYSNTRAEGFGSEVKRRIMIGT YVLSHGYYDAYYLKAQKLRRLVANDFQTAFGQCDFILAPTAPTAAPKLGSDIHDPVQMYL SDIYTIAVNLAGLPALTLPAGFSANGLPIGVQFIGNYFSEAKILGAAHQVQLNSDWHTKA PK >gi|241319676|gb|ACQV01000022.1| GENE 149 166025 - 166900 579 291 aa, chain + ## HITS:1 COG:NMA1569 KEGG:ns NR:ns ## COG: NMA1569 COG2990 # Protein_GI_number: 15794462 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 5 287 7 289 310 369 63.0 1e-102 MPEKFSFPGFKTVYQNAPKFKTQHLKFTLRTLWYRKEIKAFEQFVNASEICQSFFSQMPQ DAYPLIHEFVDKKLSGQDRLKIMQSDFEAAEKLFGKERVMGMKTRSFHIVLAKPSDGLEI WLNRNDNCVDEGMWSLSLRESNGRRLYMTTFAFVNNMLLAASLQGPAGEEAKDTVRVLTK KLHGLRPQQLMVHALQYFAIALKLDGVIGITQDRQVKLRWRLKKRVKMNYDQFWQEHGAQ KGVDGLWHLPKEPVRKDFEEIESKKRSMYRKRYQMLDEIEEQIRNGLAPIK >gi|241319676|gb|ACQV01000022.1| GENE 150 166929 - 167549 706 206 aa, chain + ## HITS:1 COG:PA1037 KEGG:ns NR:ns ## COG: PA1037 COG2860 # Protein_GI_number: 15596234 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 7 201 6 198 206 102 33.0 4e-22 MNTTDFIQIIGTAAFAISGYLVGYNKQLDVLGVVITALLTAVDGGMIRDGLVGRIPQVFL KTDALIVVFATLAIAWLIRVQRYRSTYLAAVFIIADAIGLAAFSITGAQIGMALQLDLFG VISLAFVTAVGGGIARDILVNDVPMILRTDLYGSVAILIGGLIYLFGHLGWINIFTLNLL FAGGLLFRLTAYRFHWQLPGFQRRRK >gi|241319676|gb|ACQV01000022.1| GENE 151 167651 - 169081 2205 476 aa, chain + ## HITS:1 COG:NMA1570 KEGG:ns NR:ns ## COG: NMA1570 COG0064 # Protein_GI_number: 15794463 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Neisseria meningitidis Z2491 # 1 476 1 476 476 847 94.0 0 MTWETVIGLEIHVQLNTQSKIFSGASTAFGAEPNAHASVVECALPGVLPVMNREVVEKAI KLGLALDAKINQKNVFDRKNYFYPDLPKGYQISQLDLPIVEHGKLEIVVGDEVKTINVTR AHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMRSAAEAVAYAKALHGLVTWLD ICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNSFRFLEQAINYEVEAQIEILEDG GKVQQATMLFDPEKGETRVMRLKEDAHDYRYFPDPDLLPVIISDGQLQKAKEQMPELPHE MAARFVADYGVSDYDARLLTASRAQAAYFEEAAKACGQGKLTANWMNGELAATLNKEGLE LAESPITAPRLAELVAKVADGTLSSKLAKKAFEAMWAEPEAGIAEIIEKHGLQQITDTGA IEAMVDEVLANNAKAIEQFRSGNEKALNAIVGQVMKASKGKANPAQVQELIKAKLA >gi|241319676|gb|ACQV01000022.1| GENE 152 169161 - 170165 814 334 aa, chain + ## HITS:1 COG:NMB1359 KEGG:ns NR:ns ## COG: NMB1359 COG0543 # Protein_GI_number: 15677224 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 334 1 334 336 521 72.0 1e-148 MTHTITLSDQITFMANEDETVLAAATRQNLNLPHSCKSGACGQCKAELMSGEFEMGDHID KAISAEEKAQGKVLLCCTTAKSNLKINVPGFNPNALLVRTLPVRIETIEIKHDVALLRLA LPKVPSFTFYAGQYIDLLLPGNISRSYSIANSPDQEGVLELHIRKRENGVCSEMIFGAEP KVKEKGIVRVKGPLGTFTLQKDSDKPIVLLATGTGYSPIRSILLDLIHQNSERPVHFYWG ARQQEDLYALEEAEALIGRLKNAKFSPVLSKPDSDWKGENGYVQNVAAQNYSDLSQYEVY ACGSPAMTESAQSLLTQKCALPEDAFFCDAFSPA >gi|241319676|gb|ACQV01000022.1| GENE 153 170431 - 170637 91 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288576054|ref|ZP_06394140.1| ## NR: gi|288576054|ref|ZP_06394140.1| hypothetical protein NEIMUCOT_05597 [Neisseria mucosa ATCC 25996] # 1 68 1 68 68 95 92.0 1e-18 MVGFVGDEGVFAVFGHGFGLGMFECADAAFLIGAYPSSQVGSGNAVVVCGTLLAAYVQVV EYGLVFEV >gi|241319676|gb|ACQV01000022.1| GENE 154 170590 - 170766 268 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 58 309 366 366 103 89.0 4e-21 MTEHRKNPFIADKPDHEKTQAELIEELCHMRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241319676|gb|ACQV01000022.1| GENE 155 171029 - 171565 529 178 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 173 41 213 216 184 53.0 9e-47 MGKISEHLLKRLFTAKKPNKKWLTDVTELKGSDGKLYLSPILDLFNREIVAYAMSRNANS EMVKEMLEKAAPRLTDKGTMLHSDQGVLYRTAGYRELLAEHSMIQSMSRKANCWDNAPME SFFAVLKTECFYNAGELTVDELMKQIDDYMDYYNRERCSLKLKKLSPVAYRTQLAQSA >gi|241319676|gb|ACQV01000022.1| GENE 156 171651 - 173759 2624 702 aa, chain - ## HITS:1 COG:NMB1297 KEGG:ns NR:ns ## COG: NMB1297 COG0741 # Protein_GI_number: 15677164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis MC58 # 1 702 1 658 658 661 55.0 0 MAKLKTIALTVSSLSAVSATAYAQNATPNQVGMAMMRLNSSLLDQAKAQTFGSGSLWASL RKDFRINEVNTELVRRHENKFAANSAYFDRTISRSKPYMYHIANEVKKRNMPAEIALLPF IESAFVTKAKSHVGASGLWQFMPATGRHFGLEKTPLYDGRHDVYAATDAALNYLQYLHGM FGDWSLALAAYNWGEGNVGRAVNRARAQGLEPTYENLRMPNETRNYVPKLLAVRNIVANP QTFGMNISEISNQPYFKSVSIDKPIDNSTIARFANISESELLALNPGFNAPVFIPKNNRR LLLPVSAVSAFEKNYRNANPDTLISWDIYTSLGNKKLNAIANDTGMSVAELKRLNGLSGS AISEGRSILVAKNSATQSQDIINFIDKDNTPDTYQSNMPAMSPIIASNVAEPVKVAQNTV TNIVSPIVPQSSKPVDFIARSKAENVTSVAVTETKAQPQVANADVAAPVVAMPHTTSDPA ATNVAEAPKAAIPADLTAPTVAANDVAPALAVESVAAAPVQEEHDDLMALVQSRPAEEPA ATVAEATPEAKQVQTVVTAESARAARIAANTAKQQRRINARLARVNGQQNTQTAALEAGT HRVADGDTLFNISKRYNLSVADLIIANNIKGNNIKKGQILRVTAAPAKVRSNPIQNVSYT VRKGDTLNTIANRFNVDVNDIRRWNRNTRTVTPGQRLKLIGS >gi|241319676|gb|ACQV01000022.1| GENE 157 173931 - 174575 390 214 aa, chain + ## HITS:1 COG:NMB1296 KEGG:ns NR:ns ## COG: NMB1296 COG0500 # Protein_GI_number: 15677163 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 3 202 8 205 221 236 58.0 2e-62 MQTPMGQYLAQKEADFFRRHLQYLNGQVAVQLGGIWQRPSENMIVVPRDVRMDAEMLAFE THSVDVLLMPHLLEISSADLVLQEAFRILKPEGRLILTGFNPKSLWGLSSWFDGKRLPMK SQCLALAELKRRIADIGFEMEYGQFMDYLPAVNSPSALKFWRFMEKAGDRWWPQCAAVYG VVLTKHLIGVHPLPELESAFDGNTVALSTARLAE >gi|241319676|gb|ACQV01000022.1| GENE 158 174619 - 175446 582 275 aa, chain + ## HITS:1 COG:NMB1295 KEGG:ns NR:ns ## COG: NMB1295 COG0266 # Protein_GI_number: 15677162 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 275 1 275 275 485 81.0 1e-137 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPDLAQILAGCKVLACNRRAKYL IITFETGILLIHLGMSGSLRIFTADDERIATPDKHDHLDFVFDDGTVLRYHDPRKFGAVL WYEGIAEHHPLLEKLGPEPLSDDFDANYLYQKLKNQKRAVKLALMDNAVVVGVGNIYANE SLFKAGISPLRPANKLTKKEYALLVETVKAVLQRAIETGGSTLRDFVNSDGKSGYFQQEY TVYSRHNEPCVQCGGLIFKETLGQRGTFYCPNCQK >gi|241319676|gb|ACQV01000022.1| GENE 159 175511 - 176296 672 261 aa, chain + ## HITS:1 COG:NMB1294 KEGG:ns NR:ns ## COG: NMB1294 COG0204 # Protein_GI_number: 15677161 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis MC58 # 1 255 1 253 255 336 67.0 2e-92 MSKQKAPFFKRLGRLCRLAAWLFRTGRDLRAIDGNNAEERNHAVVVLGKGALDALDIELE IGVPPQGNVSGTLVVANHVSWLDIFAMSAVYPSSFIAKQEISGWPVLGKMGKNAGTVFIK RNSRRDIEPINQAICAALKAGQNVSFFPEARTSSGLGILPFKAALFQSAIDAKAPIQAVT LRYYDGEGQRTDLPSYAEVNLFQSLWRIVSMKKIRIRLDFSPQYKPTDMPDKDRYVLKDI AETAIGEIVASDSPVQPLPKK >gi|241319676|gb|ACQV01000022.1| GENE 160 176485 - 177222 1144 245 aa, chain + ## HITS:1 COG:NMB0946_1 KEGG:ns NR:ns ## COG: NMB0946_1 COG0678 # Protein_GI_number: 15676839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Neisseria meningitidis MC58 # 1 172 1 172 172 351 97.0 7e-97 MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLPGAFTPTCSSSHLPRYN ELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEEADNIYMIPDGNGEFTEGMGMLVGKEDL GFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTMLKFIAPEWKAQESVAIFTKP GCQFCAKAKKALQDKGLSYEEIVLGKDATVTSVRAITGKMTAPQVFIGGKYIGGSEDLEA YLAKN >gi|241319676|gb|ACQV01000022.1| GENE 161 177476 - 178882 340 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 461 5 451 458 135 25 2e-30 MKKIQADVVVLGGGTAGMGAFRNARLHTDNVYLIENNVFGTTCARVGCMPSKLLIAAAEA RHHALHTDPFGVHLDKDSVTVNGEEVMHRVKSERDRFVGFVVSDVEEWPADKRIMGTAKF VDEHTVQIDDHTQITAKSFVIATGSRPVIFPQWEVLGDRLIVNDDVFSWDTLPKSVAVFG PGVIGLELGQALHRLGVKVEIFGVAGAIGGISDPVVAEEAKTVFGEELTLHLDAKTEVKL DAEGNVEVHWEQDGEKGVFHAEYALAAAGRRPNVDNIGLENLNIEKDARGVPVADPLTMQ TSIPHIFIAGDASNQLPLLHEASDQGKIAGHNAAIFPNIEGGLRRSVIGVVFTSPQIATI GLKYAQVTAKYQPDEFVIGEVSFRNQGRSRVMLVNKGHMRLYAEKATGRFIGAEVVGPAA EHLAHLMAWAHQMKMTIPQMLDMPFYHPVIEEGLRTALRDADAKLKQA >gi|241319676|gb|ACQV01000022.1| GENE 162 179017 - 179247 341 76 aa, chain + ## HITS:1 COG:no KEGG:NGK_2000 NR:ns ## KEGG: NGK_2000 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 74 1 74 74 104 77.0 1e-21 MFIFYTVNPEPSSFPKAYILKVFRDKDNESQCIKTLCFPIRNPTLKQKTENEAHECGRLF VKQLMDKEYNRESLGR >gi|241319676|gb|ACQV01000022.1| GENE 163 179228 - 180589 574 453 aa, chain + ## HITS:1 COG:NMA0782 KEGG:ns NR:ns ## COG: NMA0782 COG2946 # Protein_GI_number: 15793757 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Neisseria meningitidis Z2491 # 27 445 24 443 449 607 68.0 1e-173 MKAWEGKAVAVVADMADASADGKAATTAEGSPPRLIGGEQNKTLNPKGAEKSDNQDFEFE YFSHFVSDGKGKFIEIPLRRGRDDGAFIDQITFTIHEDSLPKVTGKGLVSDTEFVVKYSE LLEEIFGFGITQKLPFKGKFFYKSCYQLGPDNVEYGKVHYGGQRETMLVELNGTGCQAAI PGWENRLHEFLSKCFRPKITRVDVAHDFFNGEYTPDQALLDHDNGHFDVHNMRPKSECRG TAWRNDDGSGKTFYVGKRGNSKFTRVYEKGKQFGDVNSPWVRFETEFRAGDIEIPLDVLL YAGSYLGGAYPICKAIFKTEAKRMDAKTETVNLSFDHKLFHARNQVGKMVNFLRDIGWDD TKIVDELVKGVEGYPKGLQPEQYDCRDQTQKIQYIHEEQKAIDDLKMQTLLDDLLDEKET AFPQDREKQHIRDIELEEKIISNFLNSKGNSNV >gi|241319676|gb|ACQV01000022.1| GENE 164 180582 - 180893 361 103 aa, chain + ## HITS:1 COG:no KEGG:NGK_1998 NR:ns ## KEGG: NGK_1998 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 103 1 103 103 177 91.0 8e-44 MFDQSQVTTYSATLLGAKQFKGEIDGNKIDSCTVLVASPMPSNGNAVGFTAASMKFGDSH NFEKLKNLKFPCAVDVTVAMESTGKGLVPKLLDFQVKGAPPKA >gi|241319676|gb|ACQV01000022.1| GENE 165 180907 - 181110 264 67 aa, chain + ## HITS:1 COG:no KEGG:NGK_1997 NR:ns ## KEGG: NGK_1997 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 67 1 67 67 97 85.0 2e-19 MSKYQQKFIVQELENHEFIYPDPFGDIGFTPNIKSAGQYESYEDAFNSAIEEIGGEFLIF SFYAKED >gi|241319676|gb|ACQV01000022.1| GENE 166 181197 - 181415 367 72 aa, chain + ## HITS:1 COG:no KEGG:NMC0953 NR:ns ## KEGG: NMC0953 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 72 23 94 94 72 54.0 5e-12 MKFMNTCRKYGAKLAVVAAAPLAFATQAWAEVPESVKTDLNTAKTDALSVAAIVLGIIAS IFAVQLIRRVLR >gi|241319676|gb|ACQV01000022.1| GENE 167 181483 - 181761 209 92 aa, chain + ## HITS:1 COG:no KEGG:NMA0778 NR:ns ## KEGG: NMA0778 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 1 92 1 91 91 90 50.0 1e-17 MGYQVGNNCYATRQDAENVYFSLVPPKIGDDGKLYQLNFTKFGWKYGEQILKAELPECNP IDSMKDGSYIGWSVVAIMAAVWGIRLIWQKLR >gi|241319676|gb|ACQV01000022.1| GENE 168 181883 - 182188 159 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759865|ref|ZP_04757965.1| ## NR: gi|241759865|ref|ZP_04757965.1| hypothetical protein NEIFL0001_0676 [Neisseria flavescens SK114] # 1 101 1 101 101 159 100.0 7e-38 MFIRIFNLVIFILYTFHFLNIIFIPNEIRYSILVLYLVINLLGFIQKKSKSNIKFSDNDD FYLMDTTPKKPSPKDPDMVKFMSDLNESIENKKEKIKVKNE >gi|241319676|gb|ACQV01000022.1| GENE 169 182297 - 183685 686 462 aa, chain + ## HITS:1 COG:no KEGG:NMB1747 NR:ns ## KEGG: NMB1747 # Name: not_defined # Def: putative TspB protein # Organism: N.meningitidis # Pathway: not_defined # 29 461 47 499 501 285 37.0 4e-75 MGKKPWSRSVSDNSYRKFQTEAMKARYEGYLSKQTVSATVEAQVSRKTVLSGAFGLVKRG AALGTRLSGWGTAAYLAYEAYQAVKGDIESQGYKWNEVSEEFLKEWPARNCIINDGQKVA CYGIDSSVLSAYRKGGQSRIDAEQLMKSKMEKLAGSFWDKQKIELDKGRGEKFWEFYSLD ACFFNMNGGNCSVTYGGDGRSPISFQLFMRDTVVLDQETFLQIATSSIDGNPNPFIKGTG YPEYKENIKVPAGTSITIGPITPENGKPVQITITFGQDSSGNTTTNVETTQRPDLDPGSP EAPNKKPDGNPNGNTDGKPDKKPDDKPDSDGKPDKRPDHKPDPDDDPSDKRKEDKKDDKK EESKGLLCNVFPDILACSEKGDVEEQEEPFKIPHTNNETTFSPDFFLPDNGVCPAPRTAT YLGITMEFKYDMICNFAQMIRYLVIGIAAVAAAFIMFSSRKD >gi|241319676|gb|ACQV01000022.1| GENE 170 183689 - 183985 287 98 aa, chain + ## HITS:1 COG:no KEGG:NMB1748 NR:ns ## KEGG: NMB1748 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 16 91 18 93 96 66 42.0 3e-10 MKAAFFAILQRLLTYIVAKVFIALGISFVTFTGFTVGLGFIKDYVKNQFNSMPSDIIQIV MMAGFGHALGLIFGAFAFNVAMQSISKLSFIPGGGKNK >gi|241319676|gb|ACQV01000022.1| GENE 171 183982 - 185145 587 387 aa, chain + ## HITS:1 COG:no KEGG:NMB1749 NR:ns ## KEGG: NMB1749 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 360 1 360 361 299 44.0 1e-79 MIILQTGVPGSGKTSSVVNMLMTDESYTHFTDKDGVKKKRPLFVNGIPELKIEHEELTDE QIKEKPFQDFLPYGSLVIIDEAQRLLGTRSAASKVPPFIEALALHRHHGLDIVLITQHPS FLDSFVRKLVQRHMHVSIKPVGRKLYEWNECVDQPDSSVNIARAIERTFVVPKKSFGMYK SAEVHTKPKRRIPKSLIFLALFLPLLIGFAVYTINGMSKRFNQEEKQQTAALTQTDTTDE VTTPENSIPPQPTSSLKPEDFVPRLAEKPESKPIYDNVRQVKTFEYIAGCVEGGNSGCTC YSSQGTPLKEVTKAMCKDYVKNGLPFNPYKDEQQTVQQPQTTPQTAYTHETGQVLTMGGK SPQNLMYDGYVEAGETTGFQNGAKVGS >gi|241319676|gb|ACQV01000022.1| GENE 172 185605 - 186399 -94 264 aa, chain + ## HITS:1 COG:NMA1800 KEGG:ns NR:ns ## COG: NMA1800 COG3547 # Protein_GI_number: 15794691 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 1 262 55 315 318 287 57.0 1e-77 MEATGIYYEQAAEYLSALYTVYVINPLKIKEYAKSQFSHTKTDKADSKLIAEFANRHLDK LTPFRPSENPTLYKLINLLQQLKEQQKETQNRLHTAKDIYIKSTHEAIIELLEEKIDQTS KRIEGMIKQKESLNIEYQNLQTIPAIGKETAVILLRHLTDKNFETANKFVAFAGLSPKIE QSGTSVKKNGRLSRYGHRQLKRALFMPVLVAYRMNAFPQLVSNLEAAKKPKMIIIVALMR KLAKIAFYIHKTKKPFDKALHQTV >gi|241319676|gb|ACQV01000022.1| GENE 173 186560 - 187690 1324 376 aa, chain - ## HITS:1 COG:NMA0979 KEGG:ns NR:ns ## COG: NMA0979 COG5008 # Protein_GI_number: 15793936 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Neisseria meningitidis Z2491 # 9 376 3 370 370 645 83.0 0 MFDENTPGAKKELFAWLHHMNTYKGSDLFITTNFPPAMKVDGKITRLSDEPLSAEKCMEI AFSIMSSKQIEEFSSTNECNFAISLPDTSRFRVNAMVQRGATALVFRSITSNIPKFETLN LPPILKDIALRKRGLIIFVGGTGSGKSTSLASLIDYRNENSFDHIITIEDPIEFIHQHKN CIITQREIGVDTENWPIALKNTLRQAPDVILIGEIRDRETMDYAISFAETGHLCMATLHA NNTNQALDRIINFFPEERRTQLLTDLSLNLQAFISQRLIPRESGRGRVAAVEVLLNSPII ADLIQKGEVHNIKEMMKKSTGMGMITFDQALYDLYENGDISYKDAIKNADSPHDLRLDIQ LRSRRAQNAGPDLELI >gi|241319676|gb|ACQV01000022.1| GENE 174 187894 - 188595 690 233 aa, chain + ## HITS:1 COG:NMA0978 KEGG:ns NR:ns ## COG: NMA0978 COG0775 # Protein_GI_number: 15793935 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Neisseria meningitidis Z2491 # 1 233 1 233 233 338 84.0 6e-93 MSVQTIAVVGAMEQEIELLRESMPNVKHVSFGKFSAYEGELAGKRMVLVLSGIGKVNAAV STSWVIHQFAPDCVINTGSAGGLGKGLKIGDVVIGETVAHHDVDVTAFGYVWGQVPQLPA VFASDENLIRQAEKAAQVFEGASVTQGLIVSGDRFVHSSEGVAEIRSHFPEVKAVEMEAA AIAQTCHQLEVPFVIIRAVSDSADEKADISFEEFLKTAAVSSAKMVTEIVKSL >gi|241319676|gb|ACQV01000022.1| GENE 175 188728 - 190521 2512 597 aa, chain + ## HITS:1 COG:NMA0977 KEGG:ns NR:ns ## COG: NMA0977 COG0481 # Protein_GI_number: 15793934 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Neisseria meningitidis Z2491 # 1 597 1 597 597 1129 96.0 0 MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSMDIEKERGITIKAQTAA LNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAI DLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQCSAKSGIGVEDVLEEIVAKI PAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIKLKDKVRFMSTKAETQVEQLGVF TPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTLVANPASEPLPGFKEVQSQVFAGLY PVESHDYEALRDALEKLQLNDASLKFEPEVSQALGFGFRCGFLGLLHLEIVQERLEREFD MDLITTAPTVVYEVILKNGEKIDVENPSKLPDIATIDTIMEPIITATILVPQDYVGNVMT LCNQKRGVQRNMQYMGRQVMLTYDLPMNEVVMDFFDKLKSTSRGYASLDYEFKEFMPSDL VKLDIMVNGDKVDALSLIVHRQTSVQRGRELAAKMRELIPRQMFDIAVQAAIGGQIIARE NVKALRKNVLAKCYGGDITRKKKLLEKQKAGKKRMKQVGNVEIPQSAFLAILQVSDK >gi|241319676|gb|ACQV01000022.1| GENE 176 190521 - 191540 1110 339 aa, chain + ## HITS:1 COG:NMB0765 KEGG:ns NR:ns ## COG: NMB0765 COG0681 # Protein_GI_number: 15676663 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Neisseria meningitidis MC58 # 21 339 21 339 339 471 67.0 1e-132 MSINLTLGAIVVLLAGLVLNFKSSKERQENGEWSSSLQWSYLLCMVGVFGILSEFMSFTA VLLAFVVFTCIVWAIHKGRLKKSETGEDNAHFTDYMGGFFPIILVIFVLRSFIAEPFQIP SSSMRPGLVKGDFILVNKFSYGIRLPILNKVIIPVGNIARGDVVVFNYPLQPEMNYIKRI VGIPGDVVEYRDKVLTVNGEIISEKPNGNYQYADDTDPSMIHTLERFHTALNGKNFDVVK EAGQPSVSIAVLNKYISEVMPESNYSLETSGLENCEYAEDGNGFICKVPEGRYFAMGDNR DNSADSRYWGFVDDKLIVGKAFFVWMNFGELSRIGTSIQ >gi|241319676|gb|ACQV01000022.1| GENE 177 191593 - 192471 948 292 aa, chain - ## HITS:1 COG:NMB0764 KEGG:ns NR:ns ## COG: NMB0764 COG0697 # Protein_GI_number: 15676662 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis MC58 # 8 289 15 296 301 345 73.0 7e-95 METRSGNYAAPLLVVGCVVFGLGSLIVKFVDVGSYAIAFWRLLIAAPIFFLLGRFFRQKM PTKRKTVGYAILSGVFLAFDLALWHESIHAVGPGISTLLNSLQIFFLAAIGFFFYSERLS VLQILSLILATIGVALIGSPEFSHNNNAAWGFVSGVVSGAMLALSMVFVRKTHEQEKVGL FPLMMILSFGGAMALVIPSLLFDATHLYPRTLNDVILVSIYGIVMQCFAWALIAYAIPLL SLSLTGLLLLSEPVAAMLIDYFWLDKPINTVQWSGATLTLLAIYLGSLKDKK >gi|241319676|gb|ACQV01000022.1| GENE 178 192709 - 193248 539 179 aa, chain + ## HITS:1 COG:NMA0833 KEGG:ns NR:ns ## COG: NMA0833 COG0663 # Protein_GI_number: 15793804 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Neisseria meningitidis Z2491 # 3 175 2 174 176 275 75.0 4e-74 MANPIRAFLDYVPSVDESCFVDETSVVIGEVSLAEDVSIWPYAVLRGDVNSISIGKRSNV QDGSVLHVSHKNAVKPDGSPLIIGDDVTIGHKVMLHGCRIGNRVLVGMGSIILDDTVVED DVMIGAGSLVPPRKRLESGFLYVGSPVKQVRPLTDEEKEFLTYSSAHYVRLSGQHKISK >gi|241319676|gb|ACQV01000022.1| GENE 179 193263 - 193862 766 199 aa, chain + ## HITS:1 COG:NMA0802 KEGG:ns NR:ns ## COG: NMA0802 COG0424 # Protein_GI_number: 15793776 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 1 198 1 198 201 225 53.0 4e-59 MNAIYLASGSPRRREILENLGFTVRRLPADIDETPKEGEAAVEYVRRMACEKNEAAVAQW FTAHDQEPEFAVLTADTTVADGAAILGKPESEADAVDMLERLSGRTHQVLTAVCVYWQGV RHDVVQASEVRFKTLTAEEIAAYVASGEPMDKAGAYGIQGLGGVFVEHLQGSFTGVMGLP VYETAQLLKSLGLEAPPFA >gi|241319676|gb|ACQV01000022.1| GENE 180 193951 - 194730 850 259 aa, chain + ## HITS:1 COG:NMA0902 KEGG:ns NR:ns ## COG: NMA0902 COG0030 # Protein_GI_number: 15793868 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 464 92.0 1e-131 MKEHKARKRFGQNFLQDTRIISDIVNAVRPQPDDIVIEIGPGLAAITEPLVKKLNRLHVC EIDRDIVRRLKTLPFADKLVIHEGDVLQFDFNSIEGKKKIVGNLPYNISTPLLFRLSEVA DDVIDMHFMLQKEVVERMVAQPKTNDYGRLGVMLQYFFDMEMLIEVPPESFDPAPKVDSA VVRMIPVKHRIGKAEDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGINPQDRAE HIAAEKYVELSNYLVQKAV >gi|241319676|gb|ACQV01000022.1| GENE 181 194746 - 195411 901 221 aa, chain + ## HITS:1 COG:no KEGG:PM1667 NR:ns ## KEGG: PM1667 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 8 221 5 226 226 171 44.0 2e-41 MLKKYVWCGLAVLITGTAFALGTGGEENLRRKAKAGDAEAQYLLAMQLEMTTDPVNLKES EFYYWLKKAAENGEGAAQDLLDDIEAEYDKTALEDELAPNGSQKLMNEVFKLENQKQKNY PLIKEKLFKAAALSNYAALADTAWLFGNRDNAQKYGVPFHPLKACILSVYTNNRYGDLNK DALDILCRGIYTKDNSEKIEHYAKQIKNRPSKIWSILENVK >gi|241319676|gb|ACQV01000022.1| GENE 182 195414 - 196142 611 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 239 47 6e-62 MIKFKNVHKHFKDLHVINGVNLEVKQGEVVVVCGPSGSGKSTLIRTVNQLECIESGEIWV DGINVADPKTDLNKVREEVGFVFQGFNLYPHLSVLENIILSPMKVKNQSREEAEKKAMEL LERVGLAHKKDALPGQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMK DLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEEFFTNPKHERAKQFLQQVM TH >gi|241319676|gb|ACQV01000022.1| GENE 183 196206 - 196565 521 119 aa, chain + ## HITS:1 COG:no KEGG:NMC0646 NR:ns ## KEGG: NMC0646 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 119 6 124 124 204 89.0 1e-51 MYFVDRTAVVLKPTARFWEWLKSADENMPDLTVEQLRTNCSVFLVPQFDEPESVISYFDE RYQQIFEAELAGWDIDKSKWPQDMSLKAFWEFFDTEIHDMVLDMEEAELNIAPVFDNMM >gi|241319676|gb|ACQV01000022.1| GENE 184 196639 - 197022 347 127 aa, chain + ## HITS:1 COG:no KEGG:NMCC_0653 NR:ns ## KEGG: NMCC_0653 # Name: folI # Def: transcriptional regulator # Organism: N.meningitidis_053442 # Pathway: not_defined # 2 121 25 141 146 114 50.0 1e-24 MALALCLVEFYGWMMWLGLVALAGSFAYAWRSVNFQTRNAVRKIIIDRQYRATVYLNGEE EGRSALLQDSSMLTVYTLFLQWNVDGKMVKHCILLDMADRDAYRRLKVWARWCREKEDKA ELAADMD >gi|241319676|gb|ACQV01000022.1| GENE 185 197061 - 198344 1229 427 aa, chain + ## HITS:1 COG:NMA0896 KEGG:ns NR:ns ## COG: NMA0896 COG0285 # Protein_GI_number: 15793864 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Neisseria meningitidis Z2491 # 1 424 1 424 424 774 87.0 0 MKTLQDWLSHLETAHSSGLIDMGLERVGEVKKRMNLVPQCPVVVVAGTNGKGSVCAYLSH IYKEAGFKVGTLTSPHLLRYNERIAINTQPVSDELIVSSFERIEAARGEISLTYFEFNAL AAVDIFMHENVDVMILEVGLGGRLDAVNVFDGDCSVVTSVDLDHQAFLGDTVEQVGFEKA GVFRSGKPAVCGQNPAPESLVKHTEEIGAKLLMVQRDFDFASMESVQWNYRFHPQSSDGQ SRNRNSLPFPALRGAYQLSNAACALTVLECLNEQLPVDIGAIKRGLLLVENPGRFQVLPG RPLVVLDVGHNPHAARALRRSLINLAFAQKRTAVFSMLSDKDIDGVLEIVKDQFDEWNIA PLDVPRGMTVEALQDKLAEHGIDNVNVFETVAAAYRAALAKATENDRIVVFGSFHTVADV MAVLKEH >gi|241319676|gb|ACQV01000022.1| GENE 186 198358 - 199506 1455 382 aa, chain + ## HITS:1 COG:no KEGG:NGK_0408 NR:ns ## KEGG: NGK_0408 # Name: not_defined # Def: Tpc # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 382 1 346 346 120 45.0 7e-26 MSDNKQKETPNGYDLDGYERLKRRNRRRLVLASGLVVASGMLFGLALTSGDDKNSPFKEA PVGQSQVKTADEPSKAVVLEPNKEDVAAAEEAARHADAEASNKPQNAGDEEDNAPVEVLK PSRESAPEDVGEPLVLINDTLDDGNIKGLEESERIQRVEAAKREAAERRAEERRQRQAEQ RAAAARKTQAQQEAAEKENALAAKKRALQARAEKAEREAAAERNKLAQLEKAEKAIAERK SAKNSKDSVKDKAEPAKKAEAKVEKPKNEKAKPETAKAEKADKVKTAEKPSEKAKPKAEK ETAEAKPAKKAAIQAGYAEKERAQSLQRKMKAAGIDSTITEVMTDKGKVYRVKSASYKNA RDAERDLNKLRVHGIAGQVTSE >gi|241319676|gb|ACQV01000022.1| GENE 187 199598 - 200032 364 144 aa, chain + ## HITS:1 COG:NMB0691 KEGG:ns NR:ns ## COG: NMB0691 COG1286 # Protein_GI_number: 15676589 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Neisseria meningitidis MC58 # 1 124 34 157 165 124 55.0 7e-29 MVAWVVSFIAARTLAVPFADVVFKSVEPHSLAVAMGFAAVFFLAWLLQKLARSLLSSLMS AVGLGSINRLLGGVFGAVKGVILVTLAVMVFSHTDLPKTEEWQSSYTIPYFESLADAAMP YLPGKDSAMPHLSGKAAEVEELDD >gi|241319676|gb|ACQV01000022.1| GENE 188 200185 - 201735 2071 516 aa, chain + ## HITS:1 COG:NMA0892 KEGG:ns NR:ns ## COG: NMA0892 COG0034 # Protein_GI_number: 15793861 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Neisseria meningitidis Z2491 # 1 516 1 514 514 939 91.0 0 MCGVLGLVSHEPVNQMLYDGLQMLQHRGQDAAGIVTAEGNIFHMHKGKGMVREVFRTRNM RDLIGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHNGNLTNTEELYENVCNKHL RHVNTSSDSEVLLNVFAHELRREVSKNTAPYQLTIDNIFNAVSEVHRIVRGAYGVVAMIA GYGMVAFRDPHGIRPLVLGSQTDESGKKSYAVASESVAFNALAYDLERDIQPGEAVFVSF DGSIVSRQCSDKVKLSPCLFEYVYFARPDSIIDGVSIYQARLDMGVSLAEKIKRELPVDD IDVVMPIPDTSRPSAMELAVHLEKPYREGLIKNRYIGRTFIMPGQATRKKSVRQKLSPME TEFNGKSVLLVDDSIVRGTTSREIVEMVRAAGARKVYIASAAPEVRYPNVYGIDMPTREE LIANGRSAAEISAEIGADGIVFQNLEDLEAVVKALNPKIESFDSSCFNGVYQTGDIDEAY LNRLSTEKSGCGGLKVHPSKMEHSISISDSDSDDEE >gi|241319676|gb|ACQV01000022.1| GENE 189 201810 - 202301 679 163 aa, chain + ## HITS:1 COG:NMA0891 KEGG:ns NR:ns ## COG: NMA0891 COG0782 # Protein_GI_number: 15793860 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 286 93.0 1e-77 MSTETKNYITPTGWQALKDELYHLVNKERPEIVQIVNWAASNGDRSENGDYLYGKRRMRE IDRRIRFLTKRLEAAVVVDPEAREATDQIFFSATVGLLRGDGREQTVKIVGVDEIDTAKN KISWISPLARSLIKAREGDEVVLDTPEGREVIEILSVEYIKID >gi|241319676|gb|ACQV01000022.1| GENE 190 202389 - 203000 938 203 aa, chain - ## HITS:1 COG:NMA1261 KEGG:ns NR:ns ## COG: NMA1261 COG0344 # Protein_GI_number: 15794194 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 199 1 199 200 263 80.0 1e-70 MFNVLAIIAAYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNVLRSGKKKAAALTLLGD ALKGLIAVILARCLQDALNLSDATIALVAIAALVGHMWPIFFNFKGGKGVATALGVLLAL SPATALLCTLIWLVMAFGFKVSSLAALVATVCAPIFAFFMMPHTSWAWATVFIAALVLYR HKSNIQNLIQGKESKIGDKAGKS >gi|241319676|gb|ACQV01000022.1| GENE 191 203058 - 203408 473 116 aa, chain + ## HITS:1 COG:NMB1063 KEGG:ns NR:ns ## COG: NMB1063 COG1539 # Protein_GI_number: 15676947 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Neisseria meningitidis MC58 # 1 115 1 115 118 158 70.0 2e-39 MDKIFLYGMKADTLIGLYDWERERKQTLILDLEISVPERTGTSDDIGDTIHYGEVCEVVR RSLAEQDFLLLETLAEYIAQLILNDFGAAKVRVRIVKPGILPDVAQVGIEIERTRE >gi|241319676|gb|ACQV01000022.1| GENE 192 203455 - 204102 228 215 aa, chain + ## HITS:1 COG:no KEGG:MS2110 NR:ns ## KEGG: MS2110 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 1 214 1 217 220 221 53.0 1e-56 MIEQILGSMSGIFWVFLIIIPLLLLKALLKNPKIKGSMGEIAVRSVIGKNLDEKTYSEFH DLIIPSRDGTTQIDHIYVSIFGIFVIETKNYTGWIFGSEKQSKWTQIIYKQKHYFQNPLR QNYAHIKALSELLQFPEEKFHSMVVFLGDCELKSKMPLNVCRIRQAAAYIKNFQTAVLLP HEVEAIVAVLSSSDYQANSEKLRTHTERLQQRHQR >gi|241319676|gb|ACQV01000022.1| GENE 193 204188 - 204724 864 178 aa, chain + ## HITS:1 COG:NMB1064 KEGG:ns NR:ns ## COG: NMB1064 COG0494 # Protein_GI_number: 15676948 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 178 1 178 178 300 84.0 1e-81 MDLKETKLSSESIYEGSFVTISRDRVRLPNGNESQRIVIRHPGAACVLAETEDGKVVLVR QWRYAADQATLELPAGKLDVADEDPAECALRELAEETPYVADSVKLLYSFYTAVGFCDEK MYLYQAQGVRLGSELSNDEDEITETVLMSKEEVRNALANDEIKDGKTLIGLQYWLTQN >gi|241319676|gb|ACQV01000022.1| GENE 194 204854 - 205492 1048 212 aa, chain - ## HITS:1 COG:NMB0868 KEGG:ns NR:ns ## COG: NMB0868 COG2945 # Protein_GI_number: 15676764 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Neisseria meningitidis MC58 # 1 211 1 211 213 360 84.0 1e-99 MLKPDIIQIPGPAGLLETIYLPSTQESARGVAVINHPNPLQGGTNTNKVIQTAAKALSQL GFHCYLPNLRGVGNSEGEHDYGRGETQDCIAVIDYARAQHPDTPQFVLAGFSFGGYVSTF AAQARTPDLLLLMGAAVHHYTDRPEPSNVPDVAKTLMIHGAEDEVVEINKALTWAEPQGL PVVTIAGSSHFFHGKLIVLRDTITRFAPALLG >gi|241319676|gb|ACQV01000022.1| GENE 195 205534 - 206328 1055 264 aa, chain - ## HITS:1 COG:NMA1087 KEGG:ns NR:ns ## COG: NMA1087 COG0421 # Protein_GI_number: 15794035 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Neisseria meningitidis Z2491 # 4 264 3 263 263 480 86.0 1e-135 MPPRHPYRRLRPAKSHLPEVGISEEGNIRSLHLGSDTIQSSMNVDHPSELVLSYSRAMMG WLLFAETPPKHITQIGLGGGSFARWIDSYLPHTKQTAIDINPQVIAVARSLFELPHEGEN FEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPFFQDCRNALSPDGVFVTNWW SGDQRYQRFVERLLNVFDGRVLELPAESHGNVAVMAFQSSPKEQNLDNLKKRAEKLSEKY GLDFKRMLADLKANNQNNGKNFYL >gi|241319676|gb|ACQV01000022.1| GENE 196 206860 - 207651 909 263 aa, chain + ## HITS:1 COG:NMA1088 KEGG:ns NR:ns ## COG: NMA1088 COG0413 # Protein_GI_number: 15794036 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Neisseria meningitidis Z2491 # 1 262 1 262 263 441 93.0 1e-124 MITVNTLQKMKAEGEKIAMLTAYESSFAALMDNAGVDVLLVGDSLGMAVQGRQSTLPVSL QDMCYHTECVARGTKNAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGVWMAE TTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGDKAEALLNDAKAHDVAGAAIVLMEC VPAELAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLGIFPGKTAKFVKNFMQGKDSVQA AVKAYVDEVKAKTFPSVEHTFAG >gi|241319676|gb|ACQV01000022.1| GENE 197 207771 - 208607 1170 278 aa, chain + ## HITS:1 COG:NMB0871 KEGG:ns NR:ns ## COG: NMB0871 COG0414 # Protein_GI_number: 15676767 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Neisseria meningitidis MC58 # 1 277 1 277 278 468 82.0 1e-132 MQIIHTIKELREWRKTAGKVAFVPTMGNLHEGHLALVREAKKRADNVVVSIFVNRLQFGQ GEDFDKYPRTLQQDADKLVGEGVAVVFAPDEKELYPNVEQRFNVEPPHLQNELCGKFRPG HFRGVATVVTKLFNIVQPDTACFGKKDYQQLAIIKGFVEDLNFNIDIVPVDTGRASDGLA LSSRNQYLSEAERAEAPRLYQELQNIAAALKNGNLDYAQLEAECIRRLTDAGWVVDYVEI RHAHSLAVAHVGDKELVVLAAARLGTTRLIDNLEVALA >gi|241319676|gb|ACQV01000022.1| GENE 198 208697 - 211297 3362 866 aa, chain + ## HITS:1 COG:NMB2160 KEGG:ns NR:ns ## COG: NMB2160 COG0249 # Protein_GI_number: 15677973 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Neisseria meningitidis MC58 # 1 866 1 864 864 1394 84.0 0 MSKSAVSPMMQQYLAIKSQHADKLVFYRMGDFYELFLDDAVEAAKLLDITLTTRGQMDGV PIKMAGVPFHAAEQYLARLVKMGKSVAVCEQVGEVGAGKGPVERKVVRIVTPGTLTDAAF LEDKETNRIAAVNADKKHIAIAWASLQSGEFKTKLTTADKLADELARLQAAEILLPEGKS LPDGFQTTSANITRLNSWQFAADAGAKLLTEYFGCQDLHGFGLDGKEHEAAVGAAGALLN YIRLTQNLMPQHLDGISLETDSQYIGMDAATRRNLEITQTLSGKKSPTLFSILDGCATHM GSRLLALWLHHPLRSRAHIRARQEAVAALGSQYEALQGRLKNIADIERIAARIAVGNARP RDLAALRDSLFALSEVELSAEGSSLLETLKAVFPETLPVAETLKAAVMPEPAVWLKDGGV INQGYSAELDELRHIQNHGDEFLLDLEARERERTGLSTLKVEFNRVHGFYIELSKVQAEQ APADYQRRQTLKNAERFITPELKTFEDKVLTAQEQALALEKRLFEALLKDIQTTLPQLQK AAKAAAALDVLSTFAATAAERGFVCPEFADYPVIHIENGRHPVVEQQVRHFTANHTRLDH KHRLMLLTGPNMGGKSTYMRQVAHIVLMAHTGSFVPANSAQIGPIDQIFTRIGASDDLAS NRSTFMVEMSETAYILHHATDQSLVLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLF ATHYFELTKLPEAHATAANMHLSALEQGQDIVFLHHIEPGPASKSYGIAVAKLAGLPNRA LKAAQKHLNDLENQAAANRPQLDIFSAMPSENGTEEEGKEQEVEPVDNLQNNELAEALAQ IQPDNLTPREALDALYRLKDMCNKAS >gi|241319676|gb|ACQV01000022.1| GENE 199 211335 - 212186 618 283 aa, chain + ## HITS:1 COG:no KEGG:Pnuc_1803 NR:ns ## KEGG: Pnuc_1803 # Name: not_defined # Def: hypothetical protein # Organism: Polynucleobacter # Pathway: not_defined # 3 226 4 202 267 141 38.0 3e-32 MSFTDITVVGITGADSYTEGTMYAIIRSCAELPGSRGLLISPSCPQGLPENIRHQPCRKF GYLEYNLFVLYQLMYYIDTDYCLIVQNDGWVLNGQNWQDTYREYDYIGAPLPILLETEAD GQFFLKGTDQYLAKQHLIQTSPNLDEPQNGGFSLRSRRLLAMPRQLGLNVEIRPPLPPKD EKIADMEWLVKLHHEDMFLTAQHRYRLQDLGLKFAPPNIATQFSLEVPFINQMRNVPLER VFGAHWMGNVVLTGCNRVRFAQLNEDKLETYSRFFRNLGYEWE >gi|241319676|gb|ACQV01000022.1| GENE 200 212230 - 213060 1138 276 aa, chain - ## HITS:1 COG:HI1427 KEGG:ns NR:ns ## COG: HI1427 COG5266 # Protein_GI_number: 16273332 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Haemophilus influenzae # 1 264 1 263 278 282 51.0 4e-76 MKQWMLLGLLGLGAVAQAHDVWVAAPTHQPAGQILHADLGYSHDFPNVEKIADDRVHIFK PLQLTGSSKKTVDLVNKGENYQYVSKAALPEGSYWVSATYKPTFWSKNQDGWKQQTLKQL AGSTYCEQSQMFGKSFVQVGNGAVDEAVLTRPIGQELELVPLKNPNEVKAGGILPVKVLY KGEPLVKATVTASSDTLAEMDLESTHDHREPQGFSGKTDKNGVVNVITLIDGLWKIKVVN ETDYSDKSVCQQDKAYATLIVPVGTKRAAARHAHQH >gi|241319676|gb|ACQV01000022.1| GENE 201 213442 - 214497 1421 351 aa, chain + ## HITS:1 COG:NMA1243 KEGG:ns NR:ns ## COG: NMA1243 COG1613 # Protein_GI_number: 15794178 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 3 351 1 351 351 488 70.0 1e-137 MNIRTLSFAALTAALALSACSPKAEQSADNASQAAGGKGGEVKLLNVSYDVARDFYKEYN PLFVKEFAAKNGGQSVEVQQSHGGSSKQALAVANGLAADVVTMNQTSDIELLVKKGLVKA DWNTRLPDNAVPYTSNVVFLVRKGNPKHIQDWGDLAKDGVQIVLANPKTTGNGRYAFLGA YGYGLKVNNGDEGKTKDFVAALLKNTPVFENGGRAATTTFSQRNIGDVLVTFENEANYVS KKLTQDQFEIVYPSYTILSEAPVAVVDSVVDKKGTRATAEAYLQNLWSEPAQELAANLYL RPRNAEVLAKHKADFPEIDTFNPNEKFGSWEEIMKKFFADGGLFDQLSSKK >gi|241319676|gb|ACQV01000022.1| GENE 202 214575 - 215633 1000 352 aa, chain + ## HITS:1 COG:NMA1661 KEGG:ns NR:ns ## COG: NMA1661 COG0389 # Protein_GI_number: 15794555 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 1 351 1 351 352 634 88.0 0 MSQRKIIHIDMDAFYASVELREQPHLKGLPVVVAWDGTRSVICAASYEARKFGLHSAMSV ATAKRLCPQAVFVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTQNFENVPYA SEVAKRIRAEIFEETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPQKIMAFLESLPLG KIPGVGKVTLKKMNALGIQTAGDLRRFERGELLNHFGRYGYRLYDLARGIDERPVKAERE RLQISTEITLPEDLSLAQVSSHLPHLAEDLWRQIERKNVEAKGVTLKLKTHDFRIITRSL TYSSVLPDSTSLLQAAHTLLQRIPPQREDAFRLIGIGVSHLLPKNQQQTLWL >gi|241319676|gb|ACQV01000022.1| GENE 203 215771 - 217936 1971 721 aa, chain - ## HITS:1 COG:NMA0995 KEGG:ns NR:ns ## COG: NMA0995 COG1074 # Protein_GI_number: 15793952 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Neisseria meningitidis Z2491 # 1 711 492 1200 1204 859 60.0 0 MENIDYSDVSASRAKSRLSPHRPAIQVRWLNTDDQTGKEILRGRAAEYCADEIAFALNEA AEGRLNFKGRALESGDIAVLVRTNNEAAMIAGKLKQRRIQSVLLSRQSVFDSAEADSLSA LIGFWLNPRQTDWLRFVLTGVLFGYTAKEIYELNHNEHQLLKWLESSAEAMEKWRKGGIF AAVQQFAALHDIETRLLKGGNERSLTNYYQILELLAEEDSQSRNPAALHKWLNEQIGRAR SGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTENH ETELLATSQTSEAELSHLTDEKTAEDLRLLYVALTRAEEQLNIYAAANKYCTPNNPFAYL LEGLPDADRESVNQSYKSATDVVEMLKLNWQRFIKNAPENTEFAFTEEAPPETVYQYSRQ QDQAFGAHSIKRRDFDFIRHTSFTGLSRHTKSTDEQHEPLQPAIDPAESADRAMPSENLP PPLSDGLDIHHFPRGTNAGVCLHEMLEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVS AMLDTCRLTPLIGESLSQIPPTRRLPEMGFTLYMDDFKLDNLRRWFASSEANLPTECVQA AQLLDFHDLQGYLNGFIDMVCQDSDGNVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYY LQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDQGIWKWDIDTALLSTFVERKTN S >gi|241319676|gb|ACQV01000022.1| GENE 204 217741 - 219426 1328 561 aa, chain - ## HITS:1 COG:NMB0785 KEGG:ns NR:ns ## COG: NMB0785 COG1074 # Protein_GI_number: 15676683 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Neisseria meningitidis MC58 # 2 492 3 486 1204 571 60.0 1e-162 MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIVLEKKDIEKILVVTFTKAAT AELKTRLRARLDEVLQVLNEIQTLGGEPEHISDGLNTYYDKEKKSPDDFLNRLIPLALGE QDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDYAFLCGAPLDVELSDDSRERL LIPAQDFWRQKVATDTTLAQLVFDRKCTPEEMLAEIKSYTGRPYLKFRRPEGSLKEAQAN LQETWQKVCGQLEDLEKAFWTILPKLNGQTYKRNTFENVFIDLKTNAESSHLPRLGKQTL GKLNHFSIDTLNSKLKKEYKADADAPEIIQLQALANLGRDLQAMESAEEAVFICLQLDLL SYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALAKVAAANWEIALIDEFQDTDP LQYEIFRQIFIEQGCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK LINGISALFKQKNIHSYWKTSITAMSPPAAPKAGCRHTAPPSKCAGSIRTTKPAKKFCAA VPPNIAPMKLPLRSMKQPKAV >gi|241319676|gb|ACQV01000022.1| GENE 205 219849 - 220340 519 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759741|ref|ZP_04757841.1| ## NR: gi|241759741|ref|ZP_04757841.1| hypothetical protein NEIFL0001_0718 [Neisseria flavescens SK114] # 1 163 1 163 163 167 100.0 1e-40 MNANLNVNYADENKKESTAVKGDMNATNVVINAKDSAEIASNITANNNVNITAGNGVTFT ESANTASNQGTAVNVGIGAGTTINVETGVAVPHVNGSVGVNKTDNASFTATGANVAAGND IKINANNGDVNLHGTNLVSNNSVEVEGNKVNTSGTISSVNKKT >gi|241319676|gb|ACQV01000022.1| GENE 206 220471 - 220671 210 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759808|ref|ZP_04757908.1| ## NR: gi|241759808|ref|ZP_04757908.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 66 1 66 66 132 100.0 6e-30 MRRRRGRCGNTRSELPAYLDLVAELHLPGWECFADSQTFTVSSTINRNSSYDDHLIYKFC RQAAKQ >gi|241319676|gb|ACQV01000022.1| GENE 207 220705 - 221043 329 112 aa, chain - ## HITS:1 COG:no KEGG:CGSHiGG_04715 NR:ns ## KEGG: CGSHiGG_04715 # Name: not_defined # Def: hypothetical protein # Organism: H.influenzae_PittGG # Pathway: not_defined # 4 78 5 76 152 70 53.0 2e-11 MKPRYYLALYKGHRGGSGWRVWCARATDWLTRILTRGQYSHAEIAYGPVEGGGYDCISSS VRDGGVRAKTMLLPADKWFYSEWYAAALGLPDCWRWSPNDLAAIVSVLKRQA >gi|241319676|gb|ACQV01000022.1| GENE 208 221046 - 221372 406 108 aa, chain - ## HITS:1 COG:no KEGG:Psyc_0442 NR:ns ## KEGG: Psyc_0442 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 4 94 90 182 183 76 43.0 3e-13 MIPGVFVKSVGKWFHTNDESCTQYILLRTMKELPVGLRWKTMENDFILMTRELLDEMTTQ MVLDEQADFANAERHKAAMLKAENPLEYDYSDGWTANYEQPAAELEEA >gi|241319676|gb|ACQV01000022.1| GENE 209 221387 - 222739 407 450 aa, chain + ## HITS:1 COG:XF1569 KEGG:ns NR:ns ## COG: XF1569 COG5410 # Protein_GI_number: 15838170 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 2 265 25 316 316 187 37.0 5e-47 MFTRWMFYQRRGYIWQRANHHALICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAW AMGRVPDCEFIHASYSATLAVNNSVQIRNLVQHEEYRAIFPNVELESESSSHWKTTEGGV MYAIGAGGTITGFGAGKHRDGFGGCIIIDDPHKADEARSEVRRQNIIDWFQNTVESRKNS PDTPIILIMQRLHEKDLAGWLLDGGNGEEWEHLCLPAIQDDGTVLWPERHDIETLRRMEQ AAPYVFAGQYLQKPAPPDGGTFKPDNLQFVKALPAGNIRWIRAWDLASTANDGDYTAGGR LGVTEDGRYIIANVVRGQYGADERDRILKNTAQKDGVKTKISIPQDPGQAGKSQTLYLTR QLAGFSVSASPESGDKVTRAEPFAAQVNIGNVMVLDDGTWDTDALISEMRMFPNGQHDDQ IDCLSRAFGELLDTRTGMIDYLRSQVEANK >gi|241319676|gb|ACQV01000022.1| GENE 210 222736 - 223395 235 219 aa, chain + ## HITS:1 COG:no KEGG:NGK_1439 NR:ns ## KEGG: NGK_1439 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 205 1 205 715 395 91.0 1e-109 MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDVGEPLAPVAQQAEGRRFDYEPFYNVGHS KPREREAIGFAQLRALADNYDVLRLVIETRKDQMECLKWIIQKRDVESTANNESQRKDRK IDEAIAFFQSPDKEHTWADWLRILLEDLFVIDAQCIYPRKTLGGDLYALEVIDGATIKRV LDNTGRLPAPPDTAYQQILHGMAAVSQFQPTYSTLPAFF >gi|241319676|gb|ACQV01000022.1| GENE 211 223682 - 224488 643 268 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 98 33.0 1e-20 MNMHQNTRLTPHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKVTDNR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTEYLIDPCPYLIECVYSDNGTKYKGSANY AFGVACYENGIGQKFARVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|241319676|gb|ACQV01000022.1| GENE 212 224814 - 225530 574 238 aa, chain + ## HITS:1 COG:NMB0910 KEGG:ns NR:ns ## COG: NMB0910 COG2932 # Protein_GI_number: 15676805 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 238 1 238 238 472 94.0 1e-133 MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGIAAKALPEVARVFGVSE TWLRTGEGSRTVPVLIDPGLPHEVKDIHSPMMWSSNDPLPEDDYTFVPYLKESCFKGGTG AYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRD GKIYAFAQDGMFRVKYLIRQPGGNVLIRSHNSGFYPDETAPLDSLTVIGRVFWWSVLD >gi|241319676|gb|ACQV01000022.1| GENE 213 225553 - 225666 56 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNGEVMPCSARSIIVCICNISFPYENYTLCKSVNPTF >gi|241319676|gb|ACQV01000022.1| GENE 214 225608 - 225904 320 98 aa, chain + ## HITS:1 COG:no KEGG:NGK_1457 NR:ns ## KEGG: NGK_1457 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 8 93 1 86 232 170 90.0 1e-41 MLQIQTIMDRAEQGITSPFICMAENSLEYFVKGLHATRASQINEWIGGNIAQALSLPVAP FDLLEVGEELYEELPARMKEIGKGICFGSQTQKRLRIA >gi|241319676|gb|ACQV01000022.1| GENE 215 225936 - 226166 223 76 aa, chain + ## HITS:1 COG:no KEGG:NGK_1457 NR:ns ## KEGG: NGK_1457 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 76 103 178 232 153 89.0 2e-36 MQRQIATFDWFIRNEDRTIGNPNLLYRNCDNPLIVIDHNCAFDTGFNPKNFLQNHIFSSA FKQVLEDWVLQEEMEL >gi|241319676|gb|ACQV01000022.1| GENE 216 226325 - 227140 655 271 aa, chain + ## HITS:1 COG:no KEGG:NGK_1458 NR:ns ## KEGG: NGK_1458 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 269 1 270 272 455 90.0 1e-127 MNQYAMRFAVIRFMPYVQTREFANIGIIITHPQSGYFDFKIEQRYSRLSRFFRHFEPFVY KAATHAFAEELQRIRKLAAHSAPDQIRAMLDHLTRPREALIMATQPGVTLASDREQELNR LFDYFVAHSFAKSQPEAELTRQIQAMLKPLQTIYPFKESTIGDPSGFHASIPLVQKAENG EIRKIIKPIYFGQKDPADIYHKSDKWIASIKRLRRSGYIDRSEILFAYEPPEYPDKAQQK ALLDVLGDLKEQRIQLARNKDDAIIRNFASA >gi|241319676|gb|ACQV01000022.1| GENE 217 227575 - 228051 22 158 aa, chain + ## HITS:1 COG:no KEGG:NGK_0656 NR:ns ## KEGG: NGK_0656 # Name: not_defined # Def: putative phage associated protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 128 2 177 354 216 63.0 2e-55 MKPSEMLRVAGKPIAYYPELAKPLGGVNASILFSYFFYWHDKTRHELGIYRTAEEIEIET GLSVQEQRTVRNKLKERGVLTETEKRIEHRVYYKLNLDAFDDLMLQHSGSEESTAVIRTE DLTVYTPLSVFIVVCNQGLLRNDRINFYDDTIKNIKGI >gi|241319676|gb|ACQV01000022.1| GENE 218 228106 - 229014 1501 302 aa, chain - ## HITS:1 COG:NMA0996 KEGG:ns NR:ns ## COG: NMA0996 COG2837 # Protein_GI_number: 15793953 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis Z2491 # 1 302 1 302 302 521 83.0 1e-148 MSQPQSAIIPDHAQAGIFIEADISDGRNEDIKSACRLSLEFLAKLKTRFPNDILGLTIAF GSRAWQSFGHTDEGREIKPFPELGNGLAPSTQHDLYIHIQATEQKAAYALAQSVLGTFGD SIRVATEEHGLRLYEDRGLDGFVDGTENPQGDDNVRNVAIIPEGKSDAGGSYVLLQKYLH DLKKWDAVPTAEQEASVGRSKETNDEFSKDVRLPDSHLGRVNVKENGIGLKIVRRSLPFG KLSGEHGLMFTSYCNTLHNIEVQLLNMFGDADGKTDLLLKHLSKAVSGAYYYAPSVERLQ NL >gi|241319676|gb|ACQV01000022.1| GENE 219 229118 - 230206 981 362 aa, chain + ## HITS:1 COG:CAC3027 KEGG:ns NR:ns ## COG: CAC3027 COG1408 # Protein_GI_number: 15896279 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 39 358 57 388 392 142 25.0 1e-33 MFGKMFFVSVILLQVFTFGLGRSLQWLFAPWIGKIGRRWLMGISYFITNGLLVGLLLELG HIMFRVVAFWMVILLFVMYAALATFILYLLLRRFVARQPLSRSLRLFAPLFVAGLLGFGM YNAYTPVVRHQTVFINKKMDKPLRIGVASDLHLGILFGARQLDKLTDIMKREQVDMVLLP GDLMDDTVDAYLKENMKPHLQKLTAPMGVYATLGNHDWFRDQKRIKHELEAAGLTVLANQ VLEVNGVLLVGRSDDLDRKRPSAEQLLEGQNTELPVLLMDHRPTSIEAHARLPIDVQVSG HVHNGQVAPANLIVRTLYRLAYGYEAIGNGHFFTTSGYGFWGIPLRLGSQSEVWVIDIKS RY >gi|241319676|gb|ACQV01000022.1| GENE 220 230347 - 230937 586 196 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241759747|ref|ZP_04757847.1| ## NR: gi|241759747|ref|ZP_04757847.1| hypothetical protein NEIFL0001_0734 [Neisseria flavescens SK114] # 1 196 1 196 196 356 100.0 4e-97 MGIISLALIFVSIAAVLLYFKQQLKDRKKDCRESFVSLRIALDCRHQAVRHVLDAYSKHL QEQGIASDPNVQQMCAEVETALAQTAKTFSESKIKHLCEAETALNHALKKLQTAVNGLLK QYPDEKLAGLMEMLDAAEAEVTSARRTYNRRAGSYNHHLNKLPNRLVAKPLGFDKQARLV RFTENQTQRMSSNMLA >gi|241319676|gb|ACQV01000022.1| GENE 221 231046 - 232158 1430 370 aa, chain - ## HITS:1 COG:NMA1480 KEGG:ns NR:ns ## COG: NMA1480 COG2755 # Protein_GI_number: 15794380 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Neisseria meningitidis Z2491 # 8 365 28 386 397 421 59.0 1e-117 MKFNKTLLLTLLALPITACATNDGLLSNYGSNHPAWLNKLQQLNNTSDGKFRIIQVGDSH TAGDYFTDRLRRRLQQKWGNGGIGWVYPNAVKGQRMATVRYNGSGWNTISSRKSHSDFSF GGIEARADGGSVTLSAADGSMDMQQISIFGKPVWSEQTLTVNGREIPATQNGWQLLRTNA SLPMTLSSSMPWQIGFINIERPGRGVTVSAMGINGAQLSQWSKWRSGMWEDLAQTKADLI ILAYGTNEAFSGNLDISSTERTWRNYIRQIKNTLPNAGILILGAPESLKTAYGSCGNRPV LLSEVQQMQQRVARDEKIMFWSWQDAMGGPCSMKSWMAQGLAAKDGVHFSAQGYETAADK LADSLIRFAQ >gi|241319676|gb|ACQV01000022.1| GENE 222 232155 - 233183 1232 342 aa, chain - ## HITS:1 COG:NMB1274 KEGG:ns NR:ns ## COG: NMB1274 COG2845 # Protein_GI_number: 15677142 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 342 1 322 327 399 61.0 1e-111 MKRFISLFVSILLSAVALTWFAQNSINAYWQQTYHESSPLEPLSEYAWWRIGADWQQKAY EFSDGLKASLETEDALASEDSGIETARPSENTENIEVSDKQKDSAASDAANHTDTAASEP GNQANPSTTQVVLKKGNKVFFAGDSLMQGVAPFVQKHLKQEYGVQSVNLSKQSTGLSYPN FFDWPKTIEQTLQKEPDIRVLVVFLGPNDPWDFPMGKKYLKFASPEWEAEYLNRVRRILD AASAHDVQVIWLGIPYMKKAKLNEQMRYLDKILSGTVSPQAIWLPTDKLLSNGAEEYADS VKVDGKIIRYRSKDGIHFSAEGQKLLAGKIMEKINFTHDTQP >gi|241319676|gb|ACQV01000022.1| GENE 223 233194 - 234618 2018 474 aa, chain - ## HITS:1 COG:NMA1478 KEGG:ns NR:ns ## COG: NMA1478 COG1696 # Protein_GI_number: 15794378 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Neisseria meningitidis Z2491 # 1 474 1 478 478 674 73.0 0 MPLLSIEFAVFFIAFLPLYWAFARLPQVQNVLLLVAGLGWLYRIDPIFAALILVYSSVVY LISVLMFSENEHIRKFWLGCGISAALTVLCFFKYFDFFRPIIQQYTGQSAVIDILLPLGL SYYTFQSLAYLVYCYREPKGDRFEWHELLLHLSFFPTITSGPIIRASIDGEQAGALAQIR TKQARQLIYPALAVGLIVLGIAKKWWLAGVLAEGWVSPVFENPAQFDGWGVLSAIYGYTF QLFFDFSGYTDLVIGLAMLLGFQLPKNFAAPLRAINIRDFWNRWHISLSTWIRDYIYIPL GGSKKGFGRTQLNLMIAMLLSGIWHGYGWSFLIWGALHGVALVFLNCGDKIVGRNALGRL KIGKPLAWLFTFHFVCFAFVVFNSATLADTEMLFSALFANDKGWNAPLPTDLILLGAFAM MLLLYPYLLRLFEASVKGLDKLPAWLWFIPITLILALIIVFAPSGIPGFIYANF >gi|241319676|gb|ACQV01000022.1| GENE 224 234665 - 235303 747 212 aa, chain - ## HITS:1 COG:NMA1250 KEGG:ns NR:ns ## COG: NMA1250 COG0586 # Protein_GI_number: 15794185 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 214 293 77.0 1e-79 MISTFIDFILHIDQHLVHLSAQYGPWIYAILFVVIFCETGLVVTPFLPGDSLLFAAGGIA AIGGMNIHVMVLLLLAAAILGDAANFMIGKYFGQKLFANPNSKIFRRSYLEKTHAFYEKH GGKTIIIARFVPIVRTFAPFVAGMGDMHYGTFIRYNIIGAVLWVLSFSYAGYFFANIPVV KNNLGLVMAAIIVISILPAVVEVIRAKLNAKK >gi|241319676|gb|ACQV01000022.1| GENE 225 235423 - 235638 137 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241759742|ref|ZP_04757842.1| ## NR: gi|241759742|ref|ZP_04757842.1| hypothetical protein NEIFL0001_0739 [Neisseria flavescens SK114] # 25 71 1 47 47 92 100.0 8e-18 MFVLQHIHQLGIFCSQKFVEAGIIMTGKIEDELVHKGAPVRLKSALFYVVLPSTIKDKGR LKPIPATYLHF >gi|241319676|gb|ACQV01000022.1| GENE 226 235534 - 236202 702 222 aa, chain + ## HITS:1 COG:NMA1279 KEGG:ns NR:ns ## COG: NMA1279 COG0593 # Protein_GI_number: 15794209 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Neisseria meningitidis Z2491 # 1 222 22 243 243 400 88.0 1e-111 MNQLIFDFASHDYPGFDKFLGTENAELVYVLQHKHGQFIYVWGEEGAGKSHLLRAWVAQA LDAGRNALYIDAAATPLTEAALDAEYLAIDQIEKLNNEEQALLFAIFNRFRNSGKGFLLL SSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDREKIDALVSMAAARQVTIDPEIFEYLLN HWRRDMDSLMQMLDTLDNYAVMMGKRITLPLLRQLLKQQETQ >gi|241319676|gb|ACQV01000022.1| GENE 227 236199 - 236867 874 222 aa, chain + ## HITS:1 COG:NMB1075 KEGG:ns NR:ns ## COG: NMB1075 COG0560 # Protein_GI_number: 15676959 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 222 1 222 222 435 92.0 1e-122 MKNLAIFDLDNTLINTDSDHSWPQYLIKKGIVDAAETEAQNEKFYQDYQNGCLDIDAFLK FHLAPLARFSKEELAEFHREFMAEYIVPYISPMQRMLVQSHQMAGDEMLVISSTNEFIIT PICHLFGIHNIIGTQLETGEDGRYTGNYIGTPSLKEGKITRLNQWLAERGETFESYGKVY FYSDSKNDLPLLRIVDEPVAVNPDAELEKEAKAKGWPILNFK >gi|241319676|gb|ACQV01000022.1| GENE 228 237054 - 237242 209 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261380272|ref|ZP_05984845.1| ## NR: gi|261380272|ref|ZP_05984845.1| TonB domain protein [Neisseria subflava NJ9703] # 1 62 43 104 104 105 98.0 9e-22 MDVFTTPAGNVDRVNIIQSSGNPEMDERAVKSVSKYPYPKRKTASKYQHTVTFETNVEVI NN >gi|241319676|gb|ACQV01000022.1| GENE 229 237318 - 237863 172 181 aa, chain + ## HITS:1 COG:alr3018 KEGG:ns NR:ns ## COG: alr3018 COG1573 # Protein_GI_number: 17230510 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Nostoc sp. PCC 7120 # 6 178 53 222 227 114 39.0 1e-25 MRGDPLEYTGNKLVISRGNSKAKLLIIGEAPGPIENEEGEPFRGPAGILLDEMLESEKFK LDQDIYIINAVFRMPPGRNGKKFGQPSDKVIEYYRPYVLKFIRLIEPKIIVLLGNSACKS VLDKVGITKLRGEWKCEKDICHFIMPTYHPSYVRRMKNDQYLNLVKNDIKMIRKKFDEPT M >gi|241319676|gb|ACQV01000022.1| GENE 230 238120 - 238905 961 261 aa, chain + ## HITS:1 COG:STM0813 KEGG:ns NR:ns ## COG: STM0813 COG3568 # Protein_GI_number: 16764176 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 8 247 12 250 252 193 40.0 2e-49 MSPRPVTITSYNMHKGMSALNRKVQVNRMADALGALGSDVLFLQEVQGQHLNRSHRTNFP DAPHYDIIGDSLDYHRSYGKNAVYPKRHHGNAILSRLPLKTENNLNISVNKLEQRGLLHC EVVPEGWEDPLVCLCVHLNLREPDRLKQYRAISDYVGRYIRPESPLIIAGDFNDWRQKSA RELGRALDLNEVFVDNTGKRPKTFPSRLPILSLDRIYTRNLDVIDSEIHNSKDWQHLSDH LPLSVTVRPHRKMNMKSDRKM >gi|241319676|gb|ACQV01000022.1| GENE 231 239544 - 240758 1795 404 aa, chain - ## HITS:1 COG:NMB1473 KEGG:ns NR:ns ## COG: NMB1473 COG0436 # Protein_GI_number: 15677327 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Neisseria meningitidis MC58 # 1 404 1 404 404 813 94.0 0 MEKFPKSSKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPAPFGFEAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIVHYYQTKGLLDVTVNDVYIGNGVSELITMSMQALLNDGD EILIPAPDYPLWTAAATLAGGNVRHYLCDEENDWFPNLADIEAKITPKTKAIVVINPNNP TGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGAVHHHIAALAPDLLTITFNGLSK AYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRLCANTPMQHAIQTALGGYQSINEFI LPGGRLLEQRNKAWELINQIPGVSCVKPMGAMYMFPKIDTEMYGIHDDMKFVYDLLVREK VLFVQGTGFNWIRPDHFRIVTLPPVHQIEEAMDKLKRFLQNYHQ >gi|241319676|gb|ACQV01000022.1| GENE 232 240844 - 241059 477 71 aa, chain - ## HITS:1 COG:NMA1685 KEGG:ns NR:ns ## COG: NMA1685 COG1942 # Protein_GI_number: 15794578 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Neisseria meningitidis Z2491 # 1 69 1 69 69 101 82.0 3e-22 MPYVNIKVTGGSEAPSAEQKAELIRGVTELLSRVLNKNPETTVVVIDEIDMDNWGIGGKS VTIRRAEVRNK >gi|241319676|gb|ACQV01000022.1| GENE 233 241225 - 241824 731 199 aa, chain + ## HITS:1 COG:NMB1963 KEGG:ns NR:ns ## COG: NMB1963 COG2854 # Protein_GI_number: 15677793 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Neisseria meningitidis MC58 # 9 194 14 192 196 118 39.0 6e-27 MNRFLQSLIVAAPMVIAAPYVAAETHPAQKQMQQNIDAVLKIARNTSLTEAQRVKQVEQY ANRYLDYERISALAVGAPWREFSAKQKADFIRAFKDMVIAMYSHSALIGAADANVRLLPK MTANGNKFDVFSEIQTKKGTKYEVAYQLYQSGGVYKIYNIRVDGTSLVTVYRNQFGELIK SKGIDGTIATVAAKGLKKQ >gi|241319676|gb|ACQV01000022.1| GENE 234 241884 - 242444 859 186 aa, chain - ## HITS:1 COG:NMA1133 KEGG:ns NR:ns ## COG: NMA1133 COG0231 # Protein_GI_number: 15794079 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Neisseria meningitidis Z2491 # 1 186 1 186 186 347 98.0 5e-96 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLSGAASETIYKADDKF DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDVCEVTFYEGN PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTEIQVMSYIENGDKVEIDTRTG EFRKRA >gi|241319676|gb|ACQV01000022.1| GENE 235 242487 - 243644 937 385 aa, chain - ## HITS:1 COG:NMA1132 KEGG:ns NR:ns ## COG: NMA1132 COG4394 # Protein_GI_number: 15794078 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 4 385 3 382 382 582 73.0 1e-166 MNTTPPYTCWIFCNVIDNFGDIGVSWRLARILQRELGWQVHLWTDDFPSLQALCPDLASI PNIHQGIGIHAWQANHAEDTDTAPTPDIVIETFACELPDNVQTIIRRHRPLWLNWEYLSA EDSNERLHLMPSPQVGGIQKYFWFMGFSEKSGGLLRERDYAESAGFDTETLRRQLKLPAK NAPEWLLFGYQSDIWAKWLTMWQQAGQPITLLLAGTQIIASLKNSGLVPQNALLEDGDMY QSEHVTLIKIPFVPQQDFDKLLNLADGAVIRGEDSFVRAQLAGKPFFWHIYPQEENIHLD KLHAFWDKAHQVYPDVVATAHRRLSDELNNGEALSDSQRLQAWQTLTAHQNEWRQSAAKW RDGLFAQKSAVEKLAAFISKHKKIR >gi|241319676|gb|ACQV01000022.1| GENE 236 243676 - 243954 449 92 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0878 NR:ns ## KEGG: NMCC_0878 # Name: not_defined # Def: membrane protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 92 1 92 92 128 79.0 6e-29 MSKPILLRWLVVCLIPLATLLWFALNPLEDKTQHLINGIILACEATFLFKFVLFDVIKHH LKQEPELKRQSIWMFIPIVLLIVYLFHYFGAF >gi|241319676|gb|ACQV01000022.1| GENE 237 244057 - 244845 1093 262 aa, chain + ## HITS:1 COG:NMA1576 KEGG:ns NR:ns ## COG: NMA1576 COG0171 # Protein_GI_number: 15794469 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Neisseria meningitidis Z2491 # 1 262 11 272 273 408 76.0 1e-114 MQTQAIIRHIVQWLKDYAEQARAKGFVVGVSGGIDSAVVSTLAAQTGLSVLLLEMPIRQK SDQVNRAQEHMGRLKQRYPNVKAQSVDLTQTFDTFADTVDVSETEFPNKQLALANARSRL RMTTLYYYGQLHGLLVAGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYALAAELD VSEDIQKAVPTDGLWDTERTDEEQMGASYPELEWAMSVYDSHKPEDFEGRQREVLAIYTR LHKAMQHKVNPIPVCKIPEELF >gi|241319676|gb|ACQV01000022.1| GENE 238 244914 - 245114 269 66 aa, chain - ## HITS:1 COG:no KEGG:NMO_0837 NR:ns ## KEGG: NMO_0837 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 66 49 114 114 95 78.0 4e-19 MIGRLLRFFFFCAIAALIVNRLFSRKQKRTIREIAKISAWVLLGAAAATLFWYLMMLFFK HIPNSY >gi|241319676|gb|ACQV01000022.1| GENE 239 245231 - 246370 1471 379 aa, chain + ## HITS:1 COG:NMB0940 KEGG:ns NR:ns ## COG: NMB0940 COG2021 # Protein_GI_number: 15676833 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Neisseria meningitidis MC58 # 1 379 1 379 379 722 89.0 0 MTTNASVGIVTPQKIPFDTPLALENGKTLSRFDLMIETYGTLNADKSNAVLICHALSGNH HVAGKHSAEDKYAGWWDNMVGPGKPIDTERFFVVGLNNLGGCDGSTGPLSENPETGHEYG ADFPVVTVKDWVKSQSMLADYLGIQKWAAIVGGSLGGMQALQWTISLPERVAHALVIASA PKLSTQNIAFNDVARQAILTDPDFHEGNYRSHHTVPSRGLRIARMMGHITYLAEDGLGKK FGRDLKSDGYQYGYGVEFEVESYLRYQGDKFVGRFDANTYLLMTKALDYFDPAADYGHNL TRAVENVQAKFFVASFSTDWRFSPQRSHELVKALIAAQKSVQYIEVKSNHGHDAFLMEDE AYIRAVAAYMNNVYKDCQK >gi|241319676|gb|ACQV01000022.1| GENE 240 246367 - 246948 691 193 aa, chain + ## HITS:1 COG:NMB0939 KEGG:ns NR:ns ## COG: NMB0939 COG0500 # Protein_GI_number: 15676832 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 193 1 193 193 389 92.0 1e-108 MNLRDDLQLIYDWIPEGSRVLDLGCGDGELLAALVEHKNCTGYGVEIDTDSVIAAISRGV NVIQADLEEGLVAFGDQSFDVIVLSQTIQAMQNTEKILRCLMRVAKQAIVSFPNFGYWRN RFQIAIGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAKNKIRVLERAVMTGNKQIKHL PNLLGSLAFYRVG >gi|241319676|gb|ACQV01000022.1| GENE 241 247044 - 247454 651 136 aa, chain - ## HITS:1 COG:NMB1267 KEGG:ns NR:ns ## COG: NMB1267 COG0394 # Protein_GI_number: 15677135 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Neisseria meningitidis MC58 # 1 135 19 151 151 183 66.0 9e-47 MAEYVLRHRAREAGMGNAVITASAGTSGWHDGEDMHEGTRRALKQHGIDPSGFTSSKIKP SDAEHFDYIIVMDDNNLRETEKQLGFHPGKIFKLTDLIPDSGYNHVPDPWYTGDFDETYR LVDAGSLALLEKLKQA >gi|241319676|gb|ACQV01000022.1| GENE 242 247595 - 248695 1320 366 aa, chain - ## HITS:1 COG:no KEGG:NMB1269 NR:ns ## KEGG: NMB1269 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 2 363 3 364 365 561 75.0 1e-158 MKTFVLPDTRPYPQSPIKNYLLLNAYQLAHNSSSASRKLSAGQLQTEIRTMLSQNHYINL SLAMTMAPDVGTYTSLIQSVGEVLKAENDNEAQWFALPVVLVAGCKKEQTLPLTLPTEAL FACLQNYPNLRTLTQNTQWLPYLVQSTDLSSVTPGEWFQAKQNDEAAGAFLQKFEYKPLT LPEGQSVHVVYALGYGNKDIQTALGLNLQQAGLPLMQVWQEHLALDGVTLFTNPLSPNTP LDALTDGSHTRQRMAMDVFATNAIRAIRMQSPRVGVVAAAKADGKLQFSFNATDSAFEIV PQTFTWELASTDNIAIVQQNFLDLMAECRIEHLYLLHNPLGENENIPTYAQALKLEGHNP FFSNVN >gi|241319676|gb|ACQV01000022.1| GENE 243 248901 - 249314 244 137 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 98 42 2e-19 MRLLHTMLRVGNLERSLDFYQNVLNMQLLRRRDYPEGRFTLAFVGYGDEADHTVLELTHN WDTESYDLGDAYGHIAIEVDDAYAACERVKEMGGKVVREAGPMKHGTTVIAFVEDPDGYK IEFIQKKSGSDSVQYSS >gi|241319676|gb|ACQV01000022.1| GENE 244 249366 - 250115 896 249 aa, chain - ## HITS:1 COG:RSc0680 KEGG:ns NR:ns ## COG: RSc0680 COG0204 # Protein_GI_number: 17545399 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Ralstonia solanacearum # 6 236 22 253 266 139 35.0 6e-33 MTAKIRFIFRLLCIAGCLLYGMAEMFFLFPFYSSKRKLRAIQLWSLRVLASCGMKLQTFG TPPQEGRGQMLISNHISWLDIMAVNGAFPGRFVAKDDVAKWPVVGYLATQAQTVYVSRNR GIKGNSAKIAGVTEALKNGDTVTIFPEGTSTEGREILPFKPSFFQTAYDAGVPIIPALCR YPNPDGSSPNPHTAYYGDISLWQSICMVISQPSSTVELHFLDPIEAGEDRYATALHIHAL LSEKQKQLG >gi|241319676|gb|ACQV01000022.1| GENE 245 250175 - 250930 1062 251 aa, chain - ## HITS:1 COG:RSc1538 KEGG:ns NR:ns ## COG: RSc1538 COG3176 # Protein_GI_number: 17546257 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Ralstonia solanacearum # 15 245 43 275 278 195 43.0 8e-50 MSPSRFNQTGPKIGLSVRLAETQAEIEAAQRLRYQVFAQELGAEIESDDGRDVDPYDEHC HHLLAFDDATGEVIGCYRLITEETAKKVGGWYSEHEFDLEPLKDILPQTVELGRACTHPD YRNGGLVMLLWTGLVKFMKDENLRFMIGCGSIEMRDGGNDAASLYHALKDKYLAPEQWRV KPLNPLKWDSITPSENPPVPALIKGYLKAGAWFCGEPCVDEAFNCADVLIMMDISHLSDR YLQRFAPKTDS >gi|241319676|gb|ACQV01000022.1| GENE 246 251239 - 252570 1182 443 aa, chain + ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 12 443 797 1190 1190 99 31.0 1e-20 MKLNVSLRPLCLALALFFGTAYADGGIVAGTMHKTGSLAVGKESVSGENATAVGDKAKAG GYKAAALGYDSAASGLSATALGGESKAEALRSVAVGFRAHAKGTNDVAVGGAAAASGGQS VAVGLLSKASALRAVAVGNGAQASNIDAVAIGRDSEADALSATALGDRAKARGTQSLALA SAAEAEGYQAMAVGTRAVSNAVNSVALGVESSATALNGLAVGTSSSVRKEGGTAVGGGAS ALEEKSLALGFQAKGKAEKAVALGAQSIADSAAGQAGYDFATQSASQSEETAWKSTLGAV SVGNEKDSRQITHVAAGTQDTDAVNVAQVKRLAERWQADSQQKESVVAAQINQIRAETRV EMKKLEDRADAGSAAAIAVGNLGQAYQPGQGAVSIGSGVWRGKAGFAVGVSKVSASGKWL VKGSAVGASKGGAGGGASVTYLW >gi|241319676|gb|ACQV01000022.1| GENE 247 252664 - 253596 855 310 aa, chain + ## HITS:1 COG:CAC2949 KEGG:ns NR:ns ## COG: CAC2949 COG0679 # Protein_GI_number: 15896202 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 71 305 70 303 305 82 26.0 1e-15 METSFLLAGKITELTLIVLMGVALVKAGLLKSENSYTLSVIALYLISPSVMIHAFQMDNT PQIIEGLKLSVMLAVFFHVVLIVLGRLFKHLFKLDALEHAATVYSNSGNLIIPLVMSVFG AEWVIYTSGFIMVQTFLFWTHLRLLICGRGNVAWKTIFTNINILSMLVGLLMFTFQIKLP HIVDNTLATVGGMIGPVAMLVAGMLLASLPLRSIMWTPRLYLVAFLRLILIPILLLFAVK VCGFAHHDAHADTVVLISFLATTSPAASTVTQMAVVYGKNAQKASAIYGLTTLLCVVTMP VMIALYRWII >gi|241319676|gb|ACQV01000022.1| GENE 248 253779 - 254252 811 157 aa, chain + ## HITS:1 COG:NMA1577 KEGG:ns NR:ns ## COG: NMA1577 COG2846 # Protein_GI_number: 15794470 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Neisseria meningitidis Z2491 # 1 157 1 157 157 270 87.0 9e-73 MTDFTLWETAPFNSTIDHILQRYHNVHRAQFEELVPLAQKVAQVHADTFPAEVADLLAYM QNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHDQAIARLEELTNNFELPEG ACGSWTRLYTLAKEMVDDLKDHIHLENEIFFPRVLAS >gi|241319676|gb|ACQV01000022.1| GENE 249 254410 - 255135 611 241 aa, chain + ## HITS:1 COG:no KEGG:Asuc_0744 NR:ns ## KEGG: Asuc_0744 # Name: not_defined # Def: hypothetical protein # Organism: A.succinogenes # Pathway: not_defined # 1 160 1 164 237 83 34.0 6e-15 MKHSKVLLSGILFAAVTACAQTTGGDWSALQDTKTGVQSRPYYEFGNVVQEISFKKTGNP ENGLKKPVLTVYRQGKLLGEAYNLEASHGSPLLPTLFLVNGKSLNINDGNDRKLLASAKR IDFYDFGRSRIGHAVFTAPNGICQDMKHGKGVSYKLVTNYIDFPDYPSPENILIITAQGK YEQDGFMLDSTESRVTSANKEFARKYGEALKSKNGPETRQVNMANAASAEKGRLLADYVC R >gi|241319676|gb|ACQV01000022.1| GENE 250 255177 - 256142 1081 321 aa, chain - ## HITS:1 COG:NMA1207 KEGG:ns NR:ns ## COG: NMA1207 COG0042 # Protein_GI_number: 15794151 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Neisseria meningitidis Z2491 # 2 320 14 332 333 582 82.0 1e-166 MQLILAPMQGLVDDVMRDLLTRIGGFDECVSEFVRITHTVHSRATWLKYVPEIAHANRTT AGTPCTVQLLGSDAENMAVNALEAVRFGADKIDLNFGCPAPTVNKHKGGAVLLKEPDLIY HIVHTLRQRLPQHIPLTAKMRLGYEDKSLALECASAIENGGACALTVHARTKVEGYEPPA HWEWVRKIRDAVNIPVTANGDVFNLQDYLDIKSVSGCNSVMLGRGAVIRPDLARQIKQYE NGETVKDTDFAEVSSWIVQFFDLCLAKEASNKYPVSRLKQWLGMMKKEFEQAQVLFDRIR AIKEADEVKQILLSFEQEMHS >gi|241319676|gb|ACQV01000022.1| GENE 251 256229 - 257800 1311 523 aa, chain + ## HITS:1 COG:Cj1135 KEGG:ns NR:ns ## COG: Cj1135 COG0463 # Protein_GI_number: 15792460 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Campylobacter jejuni # 7 504 7 511 515 435 44.0 1e-121 MHTIPATAAMLVKNSERYLSEVLSALKDFDEVLLLDNGSTDRTFEIAKGFPNVSYYKHDF IGFGPMKNLAARLAQNDWIFSIDSDEVADEALIESIRAAVLENEKEHIFSLSRLNHYHGR LIKGCGWYPDIIPRLYHRRFTRFSDRQVHESLVLPQEAKVRQLDGRLKHYSFENAEGLIQ KMQQYSSLYAEENRFKKDSSPFKALLHGGVSFVKNYLLKRGFAYGADGLTISVSNAQGSY YKYVKLYERNRTITVSLIITTYNRPDALELVLKSALSQTRLPDEIIVADDGSRQETAEVV DFIRRRTSIPVKHSWQPDRGFRAAESRNRALAQAQSDYIVLIDGDMVLDPSFIADHLKIA RKGRLIQGSRVILTEDKTQDILDEGDLPALSMFSSGIEKRLSALRCRCLAKLAGRKGNRK HKGIKTCNMGFFRSDALAVNGFDNSFVGWGREDSEFVARCYHNGMKRHNLKFAGIAYHLW HNEAERDSLPQNDALLEATLSERKIRCVHGVSDFIKDEEVAGK >gi|241319676|gb|ACQV01000022.1| GENE 252 258023 - 259351 1714 442 aa, chain + ## HITS:1 COG:PM1434 KEGG:ns NR:ns ## COG: PM1434 COG2704 # Protein_GI_number: 15603299 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Pasteurella multocida # 1 440 1 435 437 537 76.0 1e-152 MFFIQFAIVLLCILIGAQVGGIGLGVLGGIGLAVLSFGFHLQPTSPPIDVMLMIMAVVSA AAAMQASGGLDYMIKIATRVLHRNPKYITFIAPAVTYTFTVLAGTGHVAYSVLPVIAEVS RRNGIRPSRPLTMAVIASQFAIVASPIAAAVVACVTMLEPQHITMADVLKVTVPSTILGI GLACVFVNKLGKELKDDPHYQALLQDPNYVKEYIDVEEQQTDVAISPKAKLSVGIFLTAA LLVVVMGALPELRPAFEHDGAIKPMGMAHTIEIVMLSASALIILACKPNGDAITRGSVFH AGMRAVIAVFGVAWLGDTLMSGHLTEVESTVSHLVESAPWTFAFALFVLSVLVNSQGATV ATLFPIAIKLGIPAPIIIGTFVAVNGYFFIPNYGPIIAAIDFDTTGSTKIGKFIFNHSFM IPGLLSMAFSLAFGLLLVQLYY >gi|241319676|gb|ACQV01000022.1| GENE 253 259421 - 259846 605 141 aa, chain - ## HITS:1 COG:no KEGG:NMCC_1263 NR:ns ## KEGG: NMCC_1263 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 22 140 86 208 209 108 45.0 7e-23 MKSSVLKTCLTAALLSSAALTGAAEVYTWKGTSGNSYSDTPNRLQPKRSSVVNIRTHNVK PAVAPAVSASEPVAEQPNEQVAEQNKQIEERNKKIEEQNRQNKLENCKIAKINRQVAESA RLANRDSLIKQYQNDVNKYCN >gi|241319676|gb|ACQV01000022.1| GENE 254 260036 - 261499 2473 487 aa, chain + ## HITS:1 COG:NMB1201_3 KEGG:ns NR:ns ## COG: NMB1201_3 COG0516 # Protein_GI_number: 15677074 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Neisseria meningitidis MC58 # 242 487 1 246 246 475 99.0 1e-133 MRIVEKAYTFDDVLLVPAHSNVLPRDVKLQTKLTRDITLNLPLLSAAMDTVTEARLAISM AQEGGIGIIHKNMTPELQARAVSKVKRHESGVVKDPVTVAPTALIREVLEMRAQRKRKMS GLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRDRLVTVPEGTSIDEAREIMHAHKV ERVLVLNDQDELKGLITVKDILKTTEFPNANKDAEGRLRVGAAVGTGGDTEERVKALVEA GVDVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGGNIATAKAALDLVAAGADAVKVGIG PGSICTTRIVAGVGVPQLTAIHNVSEALKGTGVPLIADGGIRFSGDIAKALAAGAYSVML GGMFAGTEEAPGEIELYQGRSYKSYRGMGSLGAMSQGSADRYFQDKTDSTDKYVPEGIEG RVPYKGPIVNIIHQLTGGLRSSMGYLGCANIAEMHEKAEFVEITSAGMSESHVHDVQITK EAPNYHR >gi|241319676|gb|ACQV01000022.1| GENE 255 261565 - 261636 88 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKQILLVVVMFGILGVVFAEFAE >gi|241319676|gb|ACQV01000022.1| GENE 256 261793 - 262812 711 339 aa, chain + ## HITS:1 COG:NMB1527 KEGG:ns NR:ns ## COG: NMB1527 COG0859 # Protein_GI_number: 15677379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis MC58 # 1 334 1 334 336 576 78.0 1e-164 MSKKILIITPSWIGDCVMTQPLYRRLHELYPGCTIDAFAPKWSMAVFERMPEINRVMENP FGHGALELKKRWRIGRELGKEGYDQVIVLPGSLKSAIIALATGIKQRTGYVGESRYFLLN DIRKLDKAALPLMVDRYTALAHPTQADFNGHSDNPCFTIDPESRQAALSKHGLATDKPIL AFCPGAEYGPAKRWPARHFAELGRRYLAEGWQVWLFGSQKDFDIADEINRLSDGLCTNLC GKTNLPEAIDLLSCADTVVCNDSGLMHLAAALDRKLVAVYGSSSPDHTPPLSQKAKIVSL NLGCSPCFKRECPLGHTDCLNKLTPDRVQKAAEELARSA Prediction of potential genes in microbial genomes Time: Thu May 26 11:48:18 2011 Seq name: gi|241319636|gb|ACQV01000023.1| Neisseria flavescens SK114 ctg1118407793865, whole genome shotgun sequence Length of sequence - 19175 bp Number of predicted genes - 19, with homology - 13 Number of transcription units - 13, operones - 4 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 265 - 1797 99.0 # FJ983092 [D:1..1534] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + TRNA 1904 - 1980 96.8 # Ile GAT 0 0 + TRNA 1986 - 2061 93.7 # Ala TGC 0 0 + LSU_RRNA 2563 - 5298 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 5395 - 5503 98.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 5253 - 5312 48.8 1 1 Tu 1 . + CDS 5530 - 5709 64 ## + Term 5740 - 5771 -1.0 2 2 Tu 1 . - CDS 5674 - 5829 71 ## - Prom 5854 - 5913 4.4 + Prom 5787 - 5846 3.6 3 3 Tu 1 . + CDS 5881 - 6168 370 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 6210 - 6248 3.3 + Prom 6259 - 6318 4.9 4 4 Tu 1 . + CDS 6352 - 6462 79 ## + Term 6470 - 6521 8.8 5 5 Tu 1 . + CDS 6825 - 7451 508 ## COG1562 Phytoene/squalene synthetase + Term 7471 - 7509 -0.1 6 6 Tu 1 . - CDS 7376 - 7651 99 ## - Prom 7865 - 7924 2.0 + Prom 8135 - 8194 2.7 7 7 Op 1 3/0.000 + CDS 8300 - 8755 375 ## COG2907 Predicted NAD/FAD-binding protein + Term 8759 - 8798 9.1 + Prom 8768 - 8827 4.7 8 7 Op 2 . + CDS 8851 - 9570 860 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 9582 - 9624 -1.0 + Prom 9656 - 9715 4.0 9 8 Op 1 12/0.000 + CDS 9887 - 10714 424 ## COG0611 Thiamine monophosphate kinase 10 8 Op 2 . + CDS 10707 - 11195 559 ## COG1267 Phosphatidylglycerophosphatase A and related proteins + Prom 11198 - 11257 4.6 11 8 Op 3 . + CDS 11292 - 11660 729 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport + Term 11675 - 11722 8.6 - Term 11662 - 11708 5.4 12 9 Tu 1 . - CDS 11727 - 12023 464 ## COG5626 Uncharacterized conserved small protein - Prom 12043 - 12102 5.6 + Prom 12077 - 12136 8.5 13 10 Op 1 42/0.000 + CDS 12294 - 13019 579 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 14 10 Op 2 12/0.000 + CDS 13096 - 13971 1181 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 15 10 Op 3 . + CDS 14012 - 14956 1398 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 14964 - 15037 17.1 + Prom 14988 - 15047 6.2 16 11 Op 1 . + CDS 15069 - 15227 61 ## 17 11 Op 2 . + CDS 15224 - 16561 1462 ## COG0733 Na+-dependent transporters of the SNF family + Term 16574 - 16624 11.4 - Term 16627 - 16665 10.2 18 12 Tu 1 . - CDS 16690 - 18666 2776 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 18728 - 18787 10.0 + Prom 18858 - 18917 5.3 19 13 Tu 1 . + CDS 19096 - 19174 74 ## Predicted protein(s) >gi|241319636|gb|ACQV01000023.1| GENE 1 5530 - 5709 64 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGAFYMPVGSIGLAIGDGVRGARILMNRYLLSVRAFLVFGLCMITLLLFLNKSTESYG >gi|241319636|gb|ACQV01000023.1| GENE 2 5674 - 5829 71 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLFQAVNTVTYADRATAHTHINAYAILTQISFDFKYSKQLTVTFSTFVQE >gi|241319636|gb|ACQV01000023.1| GENE 3 5881 - 6168 370 95 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 81 107 187 205 94 66.0 5e-20 MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEE LKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK >gi|241319636|gb|ACQV01000023.1| GENE 4 6352 - 6462 79 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYLNVFDGKRNRATVQRGYSLIQLLVVMLLVSILAT >gi|241319636|gb|ACQV01000023.1| GENE 5 6825 - 7451 508 208 aa, chain + ## HITS:1 COG:NMB1130 KEGG:ns NR:ns ## COG: NMB1130 COG1562 # Protein_GI_number: 15677007 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis MC58 # 1 208 75 282 290 354 81.0 6e-98 MPEHPVHQALKDIRSNFDLPKNEFEALIDGMQMDLEQARYGGFDELKLYCYRVAGVVGCL IARILGFSNPKTLEYADKMGLALQLTNIIRDVGEDARQGRIYLPIEEMQKFDVPANVIMQ CKPTDNFAKLMQFQVNRARETYREAMLLLPAEDKKSQKVGLIMAAIYYALLNEIDRDGAQ NVLIYKIAIPSPRKKRIALKTWLFGFKP >gi|241319636|gb|ACQV01000023.1| GENE 6 7376 - 7651 99 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIRTQQDVLPIIQKAESIIFPSQGTRPTASLSPGLKQRNISSMNQRNRRRQTCPTGTNHS NFWTLSIHGLNPNSQVFKAIRFLRGEGIAIL >gi|241319636|gb|ACQV01000023.1| GENE 7 8300 - 8755 375 151 aa, chain + ## HITS:1 COG:NMA1338 KEGG:ns NR:ns ## COG: NMA1338 COG2907 # Protein_GI_number: 15794262 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Neisseria meningitidis Z2491 # 1 148 288 433 437 202 69.0 1e-52 MYYHAITTVYLRYAQAVKLPAPLTGFSDGTAQWVLHRGALGLPDNEVAVVISVSDCTEAW KDKDLAEKVHADIKRICPDLGKPEAVRIITEKRATTAATVDFVQPDFSWLHHRRIYPAGD YLHPRYPATLEAAVQSGFAAAEKLMLDLQVE >gi|241319636|gb|ACQV01000023.1| GENE 8 8851 - 9570 860 239 aa, chain + ## HITS:1 COG:NMB1127 KEGG:ns NR:ns ## COG: NMB1127 COG1028 # Protein_GI_number: 15677004 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Neisseria meningitidis MC58 # 1 239 1 239 239 412 87.0 1e-115 MTTLANKTILITGASQGLGEQVAKAYAAAGATVILVARHQKRLEKVYDAIVAAGSPEPFA ICFDLMSAEEKEFKQFAETIDEATGGKLDGVVHCASYFYALSPLDFQTVSEWVNQYRINT VAPMGLTRALFPLLKQSEDASVIFVGESHGEKPQAYWGGFGASKAALNYLCKVAADEWER FDNLRANVLVPGAINSPQRIKSHPGESKSERKNYEDVLPQFIWWASQESRGRTGEIVYL >gi|241319636|gb|ACQV01000023.1| GENE 9 9887 - 10714 424 275 aa, chain + ## HITS:1 COG:NMA2103 KEGG:ns NR:ns ## COG: NMA2103 COG0611 # Protein_GI_number: 15794978 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 275 44 318 318 381 70.0 1e-106 MLVKGRHFFEDVLPEDLAWKMLSVNLSDMAAMGAKPRWVLLSAALPELNQDWLKRFCDSF FALAVRFDTVLIGGDTTKGDLVFNVTIVGEVPTGCALRRDAAEVGDDIWVSGRLGLAAAA LNKHLGHYQLPSEIMAVCDDKLLRPEPRVSLGQALLPFAHAAQDVSDGLAQDVGHILKAS AVGAEIFADCVPSLPELKNVLSREQWLSAVLAGGDDYELIFTAAPKDRERVCQAAEQSGV PVARIGKITDSGRLNILDAEGGVLELTSLGFDHFG >gi|241319636|gb|ACQV01000023.1| GENE 10 10707 - 11195 559 162 aa, chain + ## HITS:1 COG:NMA2102 KEGG:ns NR:ns ## COG: NMA2102 COG1267 # Protein_GI_number: 15794977 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Neisseria meningitidis Z2491 # 1 155 1 155 161 192 73.0 2e-49 MAERKPTFSWLLQKPLCFLGFGFGSGLSPVAPGTAGTLAALPLAFVLCLLGIDGWILLLL CIALFFWGIRICGYTERELGIQDYGGIVWDEIVAMLLVLSLIPFKWSWWLAAFVIFRLFD ALKPWPIKWFDRRIHGGLGIMLDDLIAAAMTLMVLGLFYWIA >gi|241319636|gb|ACQV01000023.1| GENE 11 11292 - 11660 729 122 aa, chain + ## HITS:1 COG:mll5649 KEGG:ns NR:ns ## COG: mll5649 COG2967 # Protein_GI_number: 13474703 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Mesorhizobium loti # 4 111 9 116 130 97 43.0 7e-21 MNEIEINVEPRYMAGQSDVYRDRYTFNYLITICNRSDEIITLRQRFWEITDGHGETEQVG HAGLIEEQPVLYPGEAYEYNSGSQISTPWGSIEGAYEFEDSIGKRFVIGVPKLEFKAGFT LQ >gi|241319636|gb|ACQV01000023.1| GENE 12 11727 - 12023 464 98 aa, chain - ## HITS:1 COG:PA1075 KEGG:ns NR:ns ## COG: PA1075 COG5626 # Protein_GI_number: 15596272 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Pseudomonas aeruginosa # 6 76 8 78 105 57 46.0 9e-09 MSIPLLNEKLNTETARISWEELQPHFARGAAVYVAPDLDLIAVARHVAEDEAAPLKQWME QGKFGTVSDDMARTFLADKQEMWAVVVAPWVLVQPCKD >gi|241319636|gb|ACQV01000023.1| GENE 13 12294 - 13019 579 241 aa, chain + ## HITS:1 COG:NMB0588 KEGG:ns NR:ns ## COG: NMB0588 COG1121 # Protein_GI_number: 15676493 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Neisseria meningitidis MC58 # 1 240 11 250 251 382 76.0 1e-106 MSIVVENLTVSYQRRPVVHHVDMVFEDGKMWTIFGPNGAGKSTLLKAIMGLQKTDTGSVR YENMARKDIAYLPQQSDIDRSQPMTVFELAAMGLWYEIGFFGRVNAAQKKRVMAALERVE MQDFATRQIAHLSNGQFQRVLFARMLVQDAKFLLLDEPFNAVDARTTYALLEVLRQCHQD GQAVIAVLHDYEQVRAYFANTLLLAREKVTAGATENVLTDEFLAQANRMMQKQEAADWCA V >gi|241319636|gb|ACQV01000023.1| GENE 14 13096 - 13971 1181 291 aa, chain + ## HITS:1 COG:NMA0790 KEGG:ns NR:ns ## COG: NMA0790 COG1108 # Protein_GI_number: 15793764 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Neisseria meningitidis Z2491 # 1 290 1 290 291 393 83.0 1e-109 MDLYDLVVAPFAEFDFMRYALASIFCLALSAAPVGVFLVMRRMSLVGDALSHAVLPGAAI GYMFAGLSLPAMSVGGFAAGLLMALLAGLVSRFTSLKEDANFAAFYLSSLAIGVVLVSKN GSSVDLLHLLFGSVLAVDIPALQLIAVSASVTILLMAVMFRPLVLESIDPLFLKAVGGKG GFWHVLFLVLVVMNLVAGFQALGTLMSVGLMMLPAITARLWAKSMGWLMILSVALALLCG LAGLLFSYHIEIPSGPAIILCCGTLYLISVVFGWEGGILAKWLRRKKHRTA >gi|241319636|gb|ACQV01000023.1| GENE 15 14012 - 14956 1398 314 aa, chain + ## HITS:1 COG:NMB0586 KEGG:ns NR:ns ## COG: NMB0586 COG0803 # Protein_GI_number: 15676491 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Neisseria meningitidis MC58 # 14 314 1 304 304 448 85.0 1e-126 MMMLMLRYITGENMKHWKLGIVAALLTGAAYAAPLPVVTSFSILGDVAKQIGGDRVAVQS LVGPNQDSHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVPFAEATKGIQAL KAEEGGHHHDHDHEGHHHDHGEFDPHVWTDPVLMGTYAQNVANALIQADPEGKTYYQQRL GNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYNIEFIAPQGVSSEAEPSA KQVASIIRQIKREGIKAVFTENIKDTRMIDRIAKETGVNVSGRLYSDALGGAPANSYIGM YRYNVKVLTDAMKK >gi|241319636|gb|ACQV01000023.1| GENE 16 15069 - 15227 61 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLKVQLSKIHANLLGKYAPSVRITYRLSVSHSRLDFTLLQFGIFTFLNITS >gi|241319636|gb|ACQV01000023.1| GENE 17 15224 - 16561 1462 445 aa, chain + ## HITS:1 COG:NMA1961 KEGG:ns NR:ns ## COG: NMA1961 COG0733 # Protein_GI_number: 15794844 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 445 1 445 445 696 87.0 0 MSNHSSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFLLFLIFTILVALPVQLA EFYIGRTGGKNAIDSFKVLRPGSQWPWVGRMGVAACFILLSFYSVVGGWVLNYVVHSFTG EIHVGADFKALFENTISSPFGSLFYQGLFMLITIWVVKGGVSDGIEKANRVLMPGLFILF IALAIRSLTLPGAMEGVAFLLKPDWSYLKPGTMLTALGQAFFALSIGVSAMITYASYLGK DQDMFRSGHMIMWMNLFVSLLAGLVIFPAVFAFGFEPGQGPGLIFVVLPAVFMKMPMGTY LFAVFMLLVVFATLTSAFSMLETVIAATIRQDEKKRSSHAWVTGIAIFIVGIPSALSFGV WSEFKIFGKTIFDLWDFIISAVIMPIGALSVAVFTSWVQDKQSVLRDAGMGSTIPKQLLY LWLGTLRYLAPIAIIVVFINSLGLI >gi|241319636|gb|ACQV01000023.1| GENE 18 16690 - 18666 2776 658 aa, chain - ## HITS:1 COG:PA3790 KEGG:ns NR:ns ## COG: PA3790 COG1629 # Protein_GI_number: 15598985 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 27 658 61 723 723 416 37.0 1e-116 MKYPPLLILPIVLAVSQAWADTDPVPEETVTLSPVTVTGTQQEKANRVTFNPKAALQPLP AGDGADLLQSVPNMSIIRKGGSSGDPLFRGLGGSRLSVNADDQFIYGGCGMRMDPPTAYI HPNSFDQVVVTKGPQTVTQGMGLVSGSVQFIRKDPDFTEKPYNINATLTAGSNDRLDGSL EAEFGGKYGYVRTNISHNEADDYKDGDGNRIHSNFKRDSQMLQLGVTPTENTTIAGTYER SRAKVAYADRMMDGSKFDRDAWNIRFTQRNLTPWFSELELRYGKSEIDHVMDTYSLRTIY DRSGKQIKNANNPKRNTDTGRLKATFDWDKLNLQTGLDYLDDVHVARMERGGDGYSHKPY MPNQSFKQWGIFTEASWQQTDNQRWVAGLRHDQVKAHYDTARVTNPVLKHQKFNLNSGFL RWERNTDNGLKYYAGFGIAERAPDYWERLQSENKAIRAEQNRQIDAGIIWKRPNLHASVS VFGSDIKDFIMMERQGKNFGVRNINASRFGGEAEVKWTFAPNWEVGTSLAYTHGKNRTDG KPLAQTPPLEWNNTLAFDNGKFSAGALWRVVAKQNRYSKGQGNIVGQDIGASSGFGVLSL NAGWKFSKYATLQGGVDNVFNKTYAEFVSRGGDPSAGTQTMRVNEPGRTAWLRLQAKF >gi|241319636|gb|ACQV01000023.1| GENE 19 19096 - 19174 74 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKLVRPQKISDQVLAVLEERIATGI Prediction of potential genes in microbial genomes Time: Thu May 26 11:49:41 2011 Seq name: gi|241319421|gb|ACQV01000024.1| Neisseria flavescens SK114 ctg1118407793871, whole genome shotgun sequence Length of sequence - 194026 bp Number of predicted genes - 189, with homology - 183 Number of transcription units - 107, operones - 48 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 12 - 545 205 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 558 - 603 7.8 + Prom 641 - 700 6.2 2 2 Tu 1 . + CDS 742 - 1650 918 ## COG0408 Coproporphyrinogen III oxidase + Term 1668 - 1731 11.2 + Prom 1757 - 1816 4.0 3 3 Tu 1 . + CDS 1843 - 2682 1409 ## COG0501 Zn-dependent protease with chaperone function + Term 2697 - 2740 10.0 - Term 2685 - 2726 10.4 4 4 Op 1 . - CDS 2732 - 3547 926 ## COG1562 Phytoene/squalene synthetase 5 4 Op 2 2/0.225 - CDS 3601 - 4323 591 ## COG0590 Cytosine/adenosine deaminases 6 4 Op 3 . - CDS 4327 - 5268 996 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase - Prom 5288 - 5347 6.4 + Prom 5316 - 5375 4.8 7 5 Tu 1 . + CDS 5485 - 6537 1563 ## COG0502 Biotin synthase and related enzymes + Term 6552 - 6590 10.2 - Term 6540 - 6578 10.2 8 6 Op 1 . - CDS 6584 - 7594 948 ## COG1816 Adenosine deaminase - Term 7615 - 7661 6.6 9 6 Op 2 . - CDS 7672 - 8451 905 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 8488 - 8547 8.7 - Term 8492 - 8547 11.0 10 7 Op 1 . - CDS 8550 - 8993 527 ## gi|241760133|ref|ZP_04758231.1| putative lipoprotein - Term 9006 - 9051 10.6 11 7 Op 2 . - CDS 9064 - 10221 1425 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 10250 - 10309 4.3 + Prom 10266 - 10325 5.5 12 8 Op 1 . + CDS 10400 - 11173 1147 ## COG1469 Uncharacterized conserved protein + Term 11198 - 11232 6.9 + Prom 11306 - 11365 3.8 13 8 Op 2 . + CDS 11391 - 13196 2058 ## COG4232 Thiol:disulfide interchange protein + Term 13202 - 13261 22.2 - Term 13198 - 13239 11.3 14 9 Tu 1 . - CDS 13258 - 14430 1144 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - Prom 14490 - 14549 6.2 + Prom 14574 - 14633 3.7 15 10 Op 1 13/0.025 + CDS 14789 - 15235 562 ## COG1959 Predicted transcriptional regulator 16 10 Op 2 . + CDS 15287 - 16501 1870 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes + Prom 16537 - 16596 7.9 17 11 Tu 1 . + CDS 16755 - 16865 105 ## + Prom 16897 - 16956 1.5 18 12 Op 1 . + CDS 16979 - 17107 343 ## 19 12 Op 2 . + CDS 17176 - 17562 752 ## COG0822 NifU homolog involved in Fe-S cluster formation + Prom 17733 - 17792 3.2 20 13 Op 1 . + CDS 17825 - 18070 216 ## D11S_0049 hypothetical protein 21 13 Op 2 . + CDS 18140 - 18460 563 ## COG0316 Uncharacterized conserved protein + Term 18465 - 18521 8.6 22 14 Tu 1 . - CDS 18457 - 18642 217 ## COG3036 Uncharacterized protein conserved in bacteria - Prom 18667 - 18726 2.4 + Prom 18636 - 18695 4.2 23 15 Tu 1 . + CDS 18722 - 19222 563 ## COG1076 DnaJ-domain-containing proteins 1 + Term 19286 - 19321 6.0 - Term 19269 - 19314 11.6 24 16 Op 1 9/0.025 - CDS 19331 - 19903 944 ## PROTEIN SUPPORTED gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form 25 16 Op 2 13/0.025 - CDS 19969 - 20994 1008 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 21029 - 21088 7.5 - TRNA 21129 - 21204 71.6 # Gln TTG 0 0 - TRNA 21216 - 21291 71.6 # Gln TTG 0 0 - TRNA 21302 - 21377 71.6 # Gln TTG 0 0 26 17 Op 1 13/0.025 - CDS 21383 - 22258 565 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 27 17 Op 2 5/0.025 - CDS 22240 - 22824 418 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 28 17 Op 3 . - CDS 22881 - 24743 1482 ## COG0457 FOG: TPR repeat - Prom 24764 - 24823 4.8 + Prom 24771 - 24830 4.0 29 18 Tu 1 . + CDS 24919 - 25524 461 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 25695 - 25754 6.8 30 19 Op 1 . + CDS 25787 - 27079 1686 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Prom 27127 - 27186 10.3 31 19 Op 2 . + CDS 27227 - 28273 1611 ## COG0468 RecA/RadA recombinase + Term 28312 - 28364 18.0 - Term 28290 - 28361 25.0 32 20 Tu 1 . - CDS 28369 - 29217 473 ## COG0627 Predicted esterase + Prom 29470 - 29529 7.3 33 21 Tu 1 . + CDS 29718 - 31430 2431 ## COG0442 Prolyl-tRNA synthetase + Term 31446 - 31503 17.9 - Term 31439 - 31486 12.3 34 22 Op 1 . - CDS 31497 - 32303 811 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 32338 - 32397 3.5 - Term 32385 - 32427 2.4 35 22 Op 2 . - CDS 32442 - 34727 3076 ## COG1882 Pyruvate-formate lyase - Prom 34912 - 34971 7.0 + Prom 34761 - 34820 4.1 36 23 Tu 1 . + CDS 34842 - 34940 59 ## + Term 34977 - 35028 2.6 + Prom 34952 - 35011 2.0 37 24 Tu 1 . + CDS 35046 - 35129 78 ## + Term 35137 - 35169 2.0 - Term 35122 - 35158 -0.1 38 25 Op 1 4/0.025 - CDS 35209 - 36507 1856 ## COG0104 Adenylosuccinate synthase 39 25 Op 2 . - CDS 36551 - 37708 1055 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis - Prom 37905 - 37964 5.5 - Term 37945 - 38003 16.2 40 26 Tu 1 . - CDS 38030 - 38833 1190 ## COG4105 DNA uptake lipoprotein - Prom 39023 - 39082 5.6 + Prom 38633 - 38692 5.1 41 27 Op 1 . + CDS 38832 - 39956 1506 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 39959 - 40018 4.3 42 27 Op 2 . + CDS 40047 - 40631 322 ## ECDH10B_1343 hypothetical protein 43 27 Op 3 2/0.225 + CDS 40628 - 41398 1085 ## COG1496 Uncharacterized conserved protein + Prom 41427 - 41486 4.5 44 28 Op 1 12/0.025 + CDS 41519 - 41998 780 ## COG2980 Rare lipoprotein B 45 28 Op 2 . + CDS 41998 - 42999 1555 ## COG1466 DNA polymerase III, delta subunit + Prom 43012 - 43071 3.5 46 29 Op 1 . + CDS 43146 - 43565 559 ## NMC0659 hypothetical protein + Term 43578 - 43628 10.1 + Prom 43571 - 43630 2.0 47 29 Op 2 . + CDS 43657 - 44181 576 ## COG1714 Predicted membrane protein/domain + Term 44213 - 44268 18.1 - Term 44200 - 44255 18.1 48 30 Op 1 11/0.025 - CDS 44276 - 45397 1453 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 45433 - 45492 1.9 49 30 Op 2 4/0.025 - CDS 45505 - 46233 207 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 50 30 Op 3 . - CDS 46299 - 46787 405 ## COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase - Prom 46818 - 46877 6.2 + Prom 46768 - 46827 4.0 51 31 Op 1 . + CDS 46898 - 47659 524 ## NGO1349 hypothetical protein 52 31 Op 2 4/0.025 + CDS 47656 - 48414 829 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 53 31 Op 3 4/0.025 + CDS 48411 - 48671 550 ## COG0236 Acyl carrier protein 54 31 Op 4 3/0.050 + CDS 48684 - 48935 662 ## COG0236 Acyl carrier protein 55 31 Op 5 . + CDS 49008 - 49547 586 ## COG4648 Predicted membrane protein 56 31 Op 6 . + CDS 49587 - 50342 318 ## gi|241760160|ref|ZP_04758258.1| putative lipoprotein 57 31 Op 7 . + CDS 50358 - 52061 1719 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 58 31 Op 8 . + CDS 52098 - 53186 1406 ## COG0500 SAM-dependent methyltransferases + Term 53213 - 53263 2.7 - Term 53203 - 53249 13.2 59 32 Tu 1 . - CDS 53278 - 53934 669 ## COG3658 Cytochrome b - Prom 53963 - 54022 1.8 + Prom 53907 - 53966 8.8 60 33 Tu 1 . + CDS 53988 - 54869 435 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 + Term 54899 - 54946 7.1 + Prom 54930 - 54989 8.3 61 34 Tu 1 . + CDS 55019 - 55966 1240 ## COG0385 Predicted Na+-dependent transporter + Term 55983 - 56025 10.1 - Term 55971 - 56013 13.3 62 35 Tu 1 . - CDS 56036 - 56599 825 ## COG2353 Uncharacterized conserved protein - Prom 56626 - 56685 4.0 + Prom 56584 - 56643 5.2 63 36 Tu 1 . + CDS 56878 - 58737 2955 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 58752 - 58798 13.1 64 37 Op 1 . + CDS 58806 - 58937 113 ## 65 37 Op 2 . + CDS 59006 - 60295 1449 ## NGO0683 hypothetical protein 66 37 Op 3 . + CDS 60372 - 60605 271 ## gi|284799805|ref|ZP_05984917.2| putative membrane protein 67 37 Op 4 . + CDS 60607 - 61038 585 ## COG3536 Uncharacterized protein conserved in bacteria 68 37 Op 5 . + CDS 61121 - 61423 363 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 69 37 Op 6 . + CDS 61453 - 62190 326 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 + Term 62209 - 62253 8.1 - Term 62195 - 62239 8.1 70 38 Tu 1 . - CDS 62357 - 63487 1362 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 63518 - 63577 4.5 + Prom 63611 - 63670 4.5 71 39 Tu 1 . + CDS 63738 - 66362 3929 ## COG0013 Alanyl-tRNA synthetase + Term 66365 - 66426 13.1 72 40 Tu 1 . + CDS 66434 - 68047 820 ## COG3472 Uncharacterized conserved protein + Term 68192 - 68226 1.0 - Term 68293 - 68338 12.4 73 41 Tu 1 . - CDS 68386 - 69243 1100 ## COG0354 Predicted aminomethyltransferase related to GcvT - Prom 69265 - 69324 5.6 - Term 69301 - 69341 12.2 74 42 Op 1 . - CDS 69366 - 69929 843 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 69999 - 70058 4.5 - Term 70028 - 70098 10.6 75 42 Op 2 . - CDS 70127 - 72385 3040 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 72493 - 72552 8.1 + Prom 72514 - 72573 6.7 76 43 Tu 1 . + CDS 72636 - 74402 2046 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components + Prom 74463 - 74522 3.7 77 44 Op 1 . + CDS 74549 - 75274 733 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 78 44 Op 2 2/0.225 + CDS 75279 - 76208 790 ## COG4261 Predicted acyltransferase 79 44 Op 3 . + CDS 76235 - 76672 550 ## COG0824 Predicted thioesterase + Prom 76675 - 76734 7.3 80 45 Op 1 2/0.225 + CDS 76776 - 78155 1555 ## COG0534 Na+-driven multidrug efflux pump 81 45 Op 2 2/0.225 + CDS 78226 - 79266 980 ## COG0812 UDP-N-acetylmuramate dehydrogenase 82 45 Op 3 2/0.225 + CDS 79285 - 79926 1101 ## COG1309 Transcriptional regulator + Term 79941 - 80005 10.1 83 46 Op 1 2/0.225 + CDS 80016 - 80789 653 ## COG0451 Nucleoside-diphosphate-sugar epimerases 84 46 Op 2 2/0.225 + CDS 80840 - 81412 768 ## COG3165 Uncharacterized protein conserved in bacteria 85 46 Op 3 . + CDS 81440 - 82330 1316 ## COG0061 Predicted sugar kinase 86 46 Op 4 . + CDS 82355 - 82660 301 ## NGK_0684 hypothetical protein + Term 82697 - 82754 20.2 + Prom 82749 - 82808 13.1 87 47 Tu 1 . + CDS 82946 - 85390 2873 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 85408 - 85446 -0.6 - Term 85390 - 85439 8.1 88 48 Tu 1 . - CDS 85563 - 86864 1401 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 86890 - 86949 4.4 - Term 86886 - 86921 3.5 89 49 Tu 1 . - CDS 86966 - 88273 1286 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 88309 - 88368 4.8 + Prom 88314 - 88373 4.5 90 50 Op 1 . + CDS 88425 - 88799 433 ## NGK_1216 lipoprotein + Term 88803 - 88850 9.2 91 50 Op 2 . + CDS 88886 - 90295 2179 ## COG0498 Threonine synthase + Prom 90380 - 90439 6.8 92 51 Op 1 . + CDS 90599 - 92290 246 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 92292 - 92351 3.8 93 51 Op 2 . + CDS 92376 - 93152 1232 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 94 51 Op 3 11/0.025 + CDS 93224 - 95347 1921 ## COG2959 Uncharacterized enzyme of heme biosynthesis 95 51 Op 4 1/0.275 + CDS 95344 - 96567 1799 ## COG3071 Uncharacterized enzyme of heme biosynthesis + Term 96629 - 96678 7.1 + Prom 96576 - 96635 2.3 96 52 Tu 1 . + CDS 96703 - 97764 1740 ## COG0407 Uroporphyrinogen-III decarboxylase + Term 97782 - 97842 5.2 + Prom 97792 - 97851 10.0 97 53 Tu 1 . + CDS 97910 - 99403 1395 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 99418 - 99459 11.3 + Prom 99432 - 99491 9.5 98 54 Op 1 . + CDS 99667 - 99861 436 ## Bpet3250 putative transmembrane protein 99 54 Op 2 7/0.025 + CDS 99874 - 100395 421 ## COG0607 Rhodanese-related sulfurtransferase 100 54 Op 3 . + CDS 100475 - 100777 284 ## COG0640 Predicted transcriptional regulators + Term 100824 - 100872 11.1 - Term 100811 - 100859 13.2 101 55 Op 1 . - CDS 100868 - 101206 336 ## gi|241760057|ref|ZP_04758155.1| putative lipoprotein 102 55 Op 2 . - CDS 101282 - 104686 4253 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 104732 - 104791 1.9 - Term 104708 - 104760 14.2 103 56 Tu 1 . - CDS 104819 - 105553 580 ## COG1814 Uncharacterized membrane protein - Prom 105800 - 105859 3.8 + Prom 105501 - 105560 7.0 104 57 Tu 1 . + CDS 105810 - 105956 302 ## + Term 105977 - 106023 15.2 + Prom 106039 - 106098 3.2 105 58 Op 1 . + CDS 106147 - 106347 428 ## NMO_0909 hypothetical protein + Prom 106349 - 106408 4.3 106 58 Op 2 . + CDS 106437 - 107834 2209 ## COG1027 Aspartate ammonia-lyase + Term 107853 - 107905 19.1 + Prom 107970 - 108029 3.0 107 59 Tu 1 . + CDS 108089 - 108751 994 ## COG0778 Nitroreductase + Term 108987 - 109023 -0.1 - Term 108841 - 108912 12.2 108 60 Tu 1 . - CDS 108932 - 111133 2816 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 111180 - 111239 8.9 - Term 111277 - 111349 11.0 109 61 Tu 1 . - CDS 111365 - 111583 552 ## COG2841 Uncharacterized protein conserved in bacteria - Prom 111607 - 111666 6.9 + Prom 111558 - 111617 5.9 110 62 Op 1 . + CDS 111855 - 112178 278 ## gi|241760156|ref|ZP_04758254.1| hypothetical protein NEIFL0001_1299 + Prom 112231 - 112290 4.7 111 62 Op 2 . + CDS 112312 - 113562 2056 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 113579 - 113632 14.1 112 63 Tu 1 . - CDS 113956 - 114870 800 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 114931 - 114990 8.9 + Prom 114881 - 114940 2.7 113 64 Op 1 . + CDS 114966 - 115478 587 ## COG1846 Transcriptional regulators 114 64 Op 2 . + CDS 115490 - 116359 1009 ## NGO1245 hypothetical protein 115 64 Op 3 . + CDS 116387 - 116710 363 ## COG2076 Membrane transporters of cations and cationic drugs + Prom 116954 - 117013 7.2 116 65 Op 1 . + CDS 117236 - 117742 773 ## NGK_1264 hypothetical protein 117 65 Op 2 . + CDS 117833 - 118420 739 ## NMCC_1281 membrane lipoprotein + Term 118461 - 118512 17.2 - Term 118452 - 118496 13.2 118 66 Tu 1 . - CDS 118548 - 118784 283 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) - Prom 118873 - 118932 2.1 - Term 118878 - 118918 8.1 119 67 Op 1 2/0.225 - CDS 118943 - 119476 912 ## COG0221 Inorganic pyrophosphatase - Prom 119496 - 119555 1.5 120 67 Op 2 . - CDS 119561 - 120025 505 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 120065 - 120124 1.7 - Term 120103 - 120162 8.1 121 68 Tu 1 . - CDS 120163 - 120816 648 ## COG4186 Predicted phosphoesterase or phosphohydrolase - Prom 120965 - 121024 2.5 + Prom 120851 - 120910 4.0 122 69 Tu 1 . + CDS 120936 - 121376 478 ## COG0698 Ribose 5-phosphate isomerase RpiB + Term 121397 - 121452 14.4 123 70 Op 1 . - CDS 121453 - 122013 655 ## RPE_3533 hypothetical protein 124 70 Op 2 . - CDS 122097 - 123575 1716 ## PM0531 hypothetical protein - Term 123606 - 123657 10.1 125 71 Tu 1 . - CDS 123664 - 125220 1650 ## Pfl01_1945 TROVE - Prom 125385 - 125444 3.4 + Prom 126120 - 126179 10.2 126 72 Tu 1 . + CDS 126345 - 127973 1809 ## COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain + Term 128067 - 128105 8.1 - Term 128055 - 128093 8.1 127 73 Op 1 12/0.025 - CDS 128164 - 128991 440 ## COG0627 Predicted esterase 128 73 Op 2 . - CDS 129000 - 130136 746 ## COG1062 Zn-dependent alcohol dehydrogenases, class III - Prom 130157 - 130216 5.5 129 74 Tu 1 . + CDS 131570 - 132166 -115 ## gi|288575679|ref|ZP_05977412.2| conserved hypothetical protein + Term 132403 - 132443 2.7 - Term 132795 - 132854 14.1 130 75 Op 1 13/0.025 - CDS 132930 - 133223 433 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 131 75 Op 2 . - CDS 133298 - 134311 869 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Prom 134403 - 134462 4.2 - Term 134522 - 134558 4.1 132 76 Op 1 . - CDS 134655 - 135212 427 ## gi|241760157|ref|ZP_04758255.1| conserved hypothetical protein 133 76 Op 2 2/0.225 - CDS 135217 - 135873 580 ## COG1468 RecB family exonuclease 134 76 Op 3 . - CDS 135888 - 136754 1335 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 135 76 Op 4 . - CDS 136766 - 138544 1653 ## NT05HA_0331 crispr-associated protein, Csd1 family 136 76 Op 5 . - CDS 138541 - 139215 402 ## NT05HA_0330 crispr-associated protein Cas5, dvulg subtype 137 76 Op 6 . - CDS 139301 - 139933 278 ## ASA_1617 hypothetical protein - Prom 139973 - 140032 1.6 138 77 Tu 1 . - CDS 140785 - 143073 1715 ## COG1203 Predicted helicases - Prom 143103 - 143162 4.4 - Term 143135 - 143182 11.0 139 78 Tu 1 . - CDS 143195 - 144124 995 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 144149 - 144208 6.5 + Prom 144169 - 144228 4.0 140 79 Tu 1 . + CDS 144249 - 144683 498 ## COG1607 Acyl-CoA hydrolase + Term 144703 - 144745 6.1 + Prom 144711 - 144770 6.0 141 80 Op 1 . + CDS 144930 - 145262 412 ## COG2116 Formate/nitrite family of transporters 142 80 Op 2 . + CDS 145275 - 145721 588 ## COG2116 Formate/nitrite family of transporters + Term 145747 - 145778 3.1 - TRNA 145879 - 145955 82.1 # Pro GGG 0 0 - Term 146050 - 146089 9.1 143 81 Tu 1 . - CDS 146110 - 147633 1838 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 147865 - 147924 6.1 144 82 Op 1 . + CDS 148488 - 149126 797 ## AZC_0123 4Fe-4S ferredoxin 145 82 Op 2 . + CDS 149126 - 149314 286 ## gi|241760131|ref|ZP_04758229.1| hypothetical protein NEIFL0001_1344 146 82 Op 3 . + CDS 149316 - 150755 2142 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 147 82 Op 4 . + CDS 150752 - 151993 1673 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 148 83 Tu 1 . + CDS 152453 - 153880 2275 ## COG0471 Di- and tricarboxylate transporters + Term 153928 - 153970 9.4 + Prom 153918 - 153977 3.5 149 84 Tu 1 . + CDS 154000 - 155412 2251 ## COG0569 K+ transport systems, NAD-binding component + Term 155437 - 155497 13.0 - Term 155433 - 155472 10.0 150 85 Op 1 2/0.225 - CDS 155490 - 156350 1256 ## COG0682 Prolipoprotein diacylglyceryltransferase - Term 156361 - 156404 12.4 151 85 Op 2 . - CDS 156425 - 157552 1670 ## COG2866 Predicted carboxypeptidase - Prom 157591 - 157650 4.5 + Prom 157645 - 157704 4.5 152 86 Tu 1 . + CDS 157730 - 158617 1365 ## COG0548 Acetylglutamate kinase + Term 158619 - 158647 -0.9 + Prom 158637 - 158696 4.3 153 87 Op 1 11/0.025 + CDS 158879 - 160165 2091 ## COG0148 Enolase 154 87 Op 2 . + CDS 160189 - 160464 437 ## COG2919 Septum formation initiator + Term 160481 - 160521 9.1 + Prom 160484 - 160543 3.7 155 88 Op 1 . + CDS 160566 - 161057 560 ## NMCC_1426 hypothetical protein + Prom 161086 - 161145 3.3 156 88 Op 2 . + CDS 161170 - 161877 1026 ## COG3471 Predicted periplasmic/secreted protein + Term 161897 - 161949 11.1 + Prom 162349 - 162408 12.2 157 89 Op 1 . + CDS 162437 - 164203 615 ## COG4928 Predicted P-loop ATPase 158 89 Op 2 . + CDS 164207 - 164947 254 ## NT05HA_2218 hypothetical protein 159 89 Op 3 . + CDS 164947 - 166263 364 ## NT05HA_2217 hypothetical protein 160 89 Op 4 . + CDS 166269 - 166991 -115 ## COG0084 Mg-dependent DNase 161 90 Tu 1 2/0.225 - CDS 167004 - 167834 614 ## COG2801 Transposase and inactivated derivatives - Prom 168033 - 168092 5.9 - Term 168041 - 168092 4.7 162 91 Op 1 4/0.025 - CDS 168106 - 168633 768 ## COG0629 Single-stranded DNA-binding protein 163 91 Op 2 4/0.025 - CDS 168635 - 170017 1794 ## COG0477 Permeases of the major facilitator superfamily - Prom 170079 - 170138 5.4 164 92 Tu 1 . - CDS 170218 - 170841 733 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 170901 - 170960 7.5 + Prom 170865 - 170924 6.1 165 93 Op 1 . + CDS 171015 - 172523 2181 ## COG0248 Exopolyphosphatase 166 93 Op 2 26/0.000 + CDS 172611 - 172982 753 ## COG0858 Ribosome-binding factor A + Term 172996 - 173042 8.6 167 93 Op 3 . + CDS 173050 - 173964 1338 ## COG0130 Pseudouridine synthase 168 93 Op 4 . + CDS 173987 - 174613 228 ## PROTEIN SUPPORTED gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 + Term 174631 - 174666 4.1 - Term 174614 - 174655 7.1 169 94 Op 1 2/0.225 - CDS 174663 - 175022 296 ## COG0239 Integral membrane protein possibly involved in chromosome condensation - Prom 175045 - 175104 2.2 170 94 Op 2 . - CDS 175106 - 175783 380 ## COG3235 Predicted membrane protein - Prom 175807 - 175866 5.2 + Prom 175860 - 175919 7.6 171 95 Tu 1 . + CDS 175948 - 179001 4020 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 179023 - 179061 10.2 + Prom 179029 - 179088 3.5 172 96 Tu 1 . + CDS 179116 - 179850 1018 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 179918 - 179964 11.2 + Prom 179916 - 179975 3.6 173 97 Op 1 . + CDS 179998 - 180330 402 ## NGK_0618 hypothetical protein 174 97 Op 2 . + CDS 180318 - 180596 413 ## gi|241760128|ref|ZP_04758226.1| hypothetical protein NEIFL0001_1377 + Term 180600 - 180660 13.7 - Term 180586 - 180646 17.5 175 98 Op 1 . - CDS 180656 - 181330 707 ## COG2003 DNA repair proteins 176 98 Op 2 . - CDS 181368 - 182021 361 ## COG3676 Transposase and inactivated derivatives - Prom 182157 - 182216 7.0 177 99 Op 1 30/0.000 + CDS 182552 - 183676 1372 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 178 99 Op 2 36/0.000 + CDS 183692 - 184657 1352 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 179 99 Op 3 2/0.225 + CDS 184657 - 185544 1464 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Term 185551 - 185598 9.8 + Prom 185554 - 185613 1.7 180 100 Tu 1 . + CDS 185692 - 186987 1665 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Prom 187015 - 187074 2.4 181 101 Tu 1 . + CDS 187096 - 188046 712 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 188140 - 188182 0.1 - Term 188074 - 188109 7.4 182 102 Tu 1 . - CDS 188256 - 188492 141 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 188516 - 188575 1.8 183 103 Tu 1 . + CDS 188596 - 188871 75 ## gi|619505|emb|CAA77880.1| IS1106 ORF2 + Term 188932 - 188967 6.7 - Term 188918 - 188955 7.1 184 104 Tu 1 . - CDS 188976 - 190991 2818 ## BC1280 hypothetical protein - Prom 191067 - 191126 5.3 - Term 191091 - 191133 1.6 185 105 Tu 1 . - CDS 191204 - 191827 899 ## COG3230 Heme oxygenase - Prom 192000 - 192059 5.9 186 106 Op 1 . + CDS 192280 - 192807 906 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 187 106 Op 2 . + CDS 192856 - 193455 750 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 188 106 Op 3 . + CDS 193481 - 193753 184 ## gi|241760031|ref|ZP_04758129.1| putative lipoprotein + Term 193943 - 193971 -0.2 189 107 Tu 1 . - CDS 193816 - 193974 103 ## COG3039 Transposase and inactivated derivatives, IS5 family Predicted protein(s) >gi|241319421|gb|ACQV01000024.1| GENE 1 12 - 545 205 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 18 175 42 175 175 83 34 6e-15 MSRLICKTLFVCTTGLLLASCGTTGKHKSHKPQTTARKVQPVRISHIDHTQGSQELMLHS LGLIGTPYKWGGSTTATGFDCSGMIQFVYKNALNVNLPRTARDMAAASRKIPDGKLKAGD LVFFNTGGTHKYSHVGLYIGNGEFIHAPSSGKTIKTEKLSTPFYAKNYLGAHTFFTE >gi|241319421|gb|ACQV01000024.1| GENE 2 742 - 1650 918 302 aa, chain + ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 6 297 8 299 299 447 72.0 1e-126 MHTESVLTLLKTLQNQICAALEQEDGEAKFVHEAWTGKLGIGETRVLKNGAVFEQAGVNF SHVKGTKMPASATAHRPELAGAAFEAMGVSLVIHPKNPYVPTSHANVRFFIAYPENAEPV WWFGGGFDLTPFYPFEEDIVHWHTVARNVCAPFGESVYPEFKQWCDEYFYLKHRNETRGV GGLFFDDLNRWDFDTCLNFIKAVGEGYIAAYLPIVAKRKNTPYGERERDFQLYRRGRYVE FNLVWDRGTLFGLQSGGRTESILMSMPPLVRFEYQYAPEEGSPEAALNQFLVARDWLKEF GK >gi|241319421|gb|ACQV01000024.1| GENE 3 1843 - 2682 1409 279 aa, chain + ## HITS:1 COG:NMB0822 KEGG:ns NR:ns ## COG: NMB0822 COG0501 # Protein_GI_number: 15676720 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis MC58 # 1 278 69 346 347 451 82.0 1e-127 MKRIFLFIATNIAVLVVIRVILAILGINSTDQVGSLLAYSAVVGFSGSIVSLLMSKTIAK HSVGAVVIDQPQSEEEAWLLATVEAQARQWNLKTPEVAIYDSPEPNAFATGATKNSSLVA VSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGIVNTFVVFLARIVSSMVARNND GSTSQGTYFMVSMVLQIVFGFLASIIVMWFSRQREYRADAGAAKLVGAPKMIAALQRLKG STSDLPQTMTAMGIASEAKDSWFSTHPSLDNRINRLKNR >gi|241319421|gb|ACQV01000024.1| GENE 4 2732 - 3547 926 271 aa, chain - ## HITS:1 COG:NMB1521 KEGG:ns NR:ns ## COG: NMB1521 COG1562 # Protein_GI_number: 15677374 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Neisseria meningitidis MC58 # 1 270 6 275 275 415 73.0 1e-116 MSVNHYENFPVGSIVLPRRLRKPVHAVYAFARTADDIADEGNAEAAERLRQLDKLKAELD CIAQGGKPQTALMQCLHNEAIEPFQLPLQPFYDLLAAFSQDVVKTRYENFGELIAYCRLS ANPVGRIMLHLYGQTDEVSMAQSDGICTALQLINFWQDVAVDWQKGRVYIPQEDLQKFKV SEEQIAVGKVDFAFQRLMAHECQRAFQMLKAGSPLGKTLKGRIGFELRMIIVGGQLILQK LDGCKYDVFNQRPLLDKKDWMIIIKRALMKK >gi|241319421|gb|ACQV01000024.1| GENE 5 3601 - 4323 591 240 aa, chain - ## HITS:1 COG:NMB0933_2 KEGG:ns NR:ns ## COG: NMB0933_2 COG0590 # Protein_GI_number: 15676827 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Neisseria meningitidis MC58 # 89 239 2 152 152 219 72.0 5e-57 MLTTPPLAPKTLSTLKELGIRTLEDLQEIGAVRAFLLLKASGLTVTKSTLWQLDALVLGV DVRHISEERKTELGEALKNHPPVAVFPSQSDMEAFMRLAIEQARQSAALGEVPVGAVIVY QGEAIAAAHNTCIGDHNVSHHAEINALATAGKALQNYRLEDCDVYITLEPCSMCASALIQ ARVGRVIYGAAEPKTGGAGSVVDLFADKRLNKHTAILGGILAEECQSVLQDFFAAKRKAV >gi|241319421|gb|ACQV01000024.1| GENE 6 4327 - 5268 996 313 aa, chain - ## HITS:1 COG:NMA1130 KEGG:ns NR:ns ## COG: NMA1130 COG0324 # Protein_GI_number: 15794076 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Neisseria meningitidis Z2491 # 1 311 1 311 313 405 65.0 1e-113 MNAPKAFAVLGPTAGGKTALALNIAQSLPVEIISLDSALVYRGMDIGTAKPTAEELAAVP HHLIDIISPLESYSAADFVGDCVRLVNEIHARGRYPFIVGGTMMYFHALTEGLNDLPSAD AAVRAQLQAEKNEHGLAGLYRRLQEVDPITAGRLKANDSQRIERALEVYLLTGKPLNEHF TEQKQAAPLLDLCTVALIPEDRHLLHRQIEKRFLNMLEHGFLDEMHGLRRDYPQLHADMP SMRCVGYRQAWDYLEGETDYDTFVEKGIVATRQLAKRQLTWLRKIPLAHTLDPYADSDYV QTALALARQHFQE >gi|241319421|gb|ACQV01000024.1| GENE 7 5485 - 6537 1563 350 aa, chain + ## HITS:1 COG:NMA1358 KEGG:ns NR:ns ## COG: NMA1358 COG0502 # Protein_GI_number: 15794279 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 350 1 350 350 673 90.0 0 MTVSPVALRRQTDRKPHPTARYWKKCDVEALFGLPFLDLVFQAAEIHRQNFNPREIQLST LLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAKIAQSRGASRFCMGAAWRG PKPKDVAVVSEIISAVKGLGMEVCGTFGMLEDGMAEDFKKAGLDYYNHNLDTDPERYNDI IHTRKHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAERAGLIASLANLDPQPESVPINQL VKVEGTPLADAEDLDWTEFVRTIAVARITMPHSYVRLSAGRSNMPESMQAMCFMAGANSI FYGDKLLTTGNPDEDGDRLLMEKLNLYPLRFELEEEYKAAQETPKIKVDY >gi|241319421|gb|ACQV01000024.1| GENE 8 6584 - 7594 948 336 aa, chain - ## HITS:1 COG:PA0148 KEGG:ns NR:ns ## COG: PA0148 COG1816 # Protein_GI_number: 15595346 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Pseudomonas aeruginosa # 5 317 3 315 316 408 62.0 1e-114 MNIKQFIQALPKAELHVHIEGTFEPELMFEIAKRNHIAIPYENVDAVRQAYDFHNLQSFL DIYYAGAGVLLHEADFYDLTRAYLERCREDNVVHTEIFFDPQTHTARGVAFETVMNGIVC ACREAGQQWGISTRLIMCFLRHLSEESAFETLNQALPYKEHIIGVGLDSSELGHPPSKFE RVFAQARAEGLLTVAHAGEEGPPEYVYEALELLHVRRIDHGVRAEEDEALMARLIAEQMP LTVCPLSNLKLKVFPEMAKHNLRRMLQRGVLVTVNSDDPAYFGGYMNRNFEALAEALDLS AEEIKTLCANSFRASFLSEAEKEEWIRKIESFNVES >gi|241319421|gb|ACQV01000024.1| GENE 9 7672 - 8451 905 259 aa, chain - ## HITS:1 COG:NMA1664 KEGG:ns NR:ns ## COG: NMA1664 COG1018 # Protein_GI_number: 15794558 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis Z2491 # 1 259 1 259 259 429 79.0 1e-120 MAASPEAKFTEEKVLWIKHHTPKLMTFAISRPESYRFSAGQFSRLGFRDGEGFIWRAYSV VSAEYADTLEYFAVLIEGGPMSARFAAMKEGDTILLDKTATGFLLPERFPDGKDLVMLCT GSGIAPFLSIIEQPEIWQRFDRLVLAHSVSYADELIFNQRLANLKGHPLIEEYFHKFTFV PVTTREETEGALSGKRIPELLKNGGLEEKVGFKFTKADTRFMVCGNPAMVKDTFQALMDL GYAMHRNRIPGEIMMENGF >gi|241319421|gb|ACQV01000024.1| GENE 10 8550 - 8993 527 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760133|ref|ZP_04758231.1| ## NR: gi|241760133|ref|ZP_04758231.1| putative lipoprotein [Neisseria flavescens SK114] # 1 147 1 147 147 276 100.0 4e-73 MKTLFGALMGMVVLAACTSPSVSQPEQASKAQVQTQQTAQPTLAAKWRVVAFNKFTEKDL AGTDAYLDLSEMPKAYGKMGCNGMMFQANTIGSDKIDFGHIAVSMMLCEDMKLEDAFLRK QSVWNYRFDGNDLILEQKGISIRLRRE >gi|241319421|gb|ACQV01000024.1| GENE 11 9064 - 10221 1425 385 aa, chain - ## HITS:1 COG:NMB0802 KEGG:ns NR:ns ## COG: NMB0802 COG0626 # Protein_GI_number: 15676700 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Neisseria meningitidis MC58 # 1 385 1 385 385 753 96.0 0 MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRYSRLSNPTRQVLEDTVA DLEHGAAGFAFSSGMAGIDAVWRTFMRPGDTIVAVADIYGGAYDLLVDVYQKWGVNVVFA DLGNPDNLDELLKAHNVKLVWLETPSNPLLRLVDIKALAAKAKAAGALVGIDNTFATPYL QRPLDMGCDFVFHSATKYLCGHSDVLMGVVVAKTKELAQPLHDMMVHTGAIAGPMDCWLV LRGIKTLALRMNAHCQNALEIARRLEAHPAIEKVFYPGLPSHEHYELAQAQMPKGIGGVV TVYLKNDTREAANGVIKNMKLVKMASSLGGVESLVNHCYSQSHSGVPHDVKMEMGIKVGL LRFSVGIEDVDDIWNDISKALDTTL >gi|241319421|gb|ACQV01000024.1| GENE 12 10400 - 11173 1147 257 aa, chain + ## HITS:1 COG:NMA1013 KEGG:ns NR:ns ## COG: NMA1013 COG1469 # Protein_GI_number: 15793969 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 257 1 257 257 449 87.0 1e-126 MNAIADVQSSRDLRNLPINQVGIKDLRFPISLKSKEGEQSTVARLTMTVFLPADQKGTHM SRFVALMEKQTDALDFDTLHKLTADMVALLDSHSGKISVSFPFFRKKSAPVSGIQSLLDY DVTLTGEIKNGTYSHSLKVMVPVTSLCPCSKEISQYGAHNQRSHVTVSLIANADVGIEEI IDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATVLIADKRIESFVVESE NFESIHNHSAYAYIAYP >gi|241319421|gb|ACQV01000024.1| GENE 13 11391 - 13196 2058 601 aa, chain + ## HITS:1 COG:NMA1719 KEGG:ns NR:ns ## COG: NMA1719 COG4232 # Protein_GI_number: 15794612 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Neisseria meningitidis Z2491 # 1 599 13 612 613 948 77.0 0 MKKFLYFLIAFLGLSSFAFAVDANDLLPPEQAFVPQVNVTDQGISVQFKIADGYYMYQSK IVAATNPDKVLAEPKFSKGEEKEDEFFGKQTVYHHTAQVDLPYKQAAPQYKLTLTYQGCA EVGVCYPPVDTEFDVKGNGVYQPQSDEPVSAKDRFLQPSASSDGQMPTQPSTNNPDSSRF KLSWDTLNANLLAFFVAGLGLSFTACMYPLLPIVSSIVVGDKKAGKGRAFTLSMVYVQGL ALTYTLVGVIAGLTGALLTVWLQQPWVVLAAAALMVVLALSMFGLFNIQLPNSVQSYFQN QSNKLSGGKIISVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTG VPLIIIGTFGGHILPKAGDWMNGIKYAFGFILLAVAVYLATPHLPYFAVVGLYTLLMIVP ALMLLAKSGKQKGRLKTVAAVLGFLLLIGGSWFGWQSFNKQTTALHHFLTLVPPSEAGQE TDHGKMFTDVGELKAAMDAALKADPSKPVMIDFYADWCVSCKEMAAYTLNQPQVHEAVDM QRFFQIDVTANTPDHQALLKEYGLFGPPGVFVVRADGSHSEALLGFVKPDAFIEWYRKNE K >gi|241319421|gb|ACQV01000024.1| GENE 14 13258 - 14430 1144 390 aa, chain - ## HITS:1 COG:NMA1592 KEGG:ns NR:ns ## COG: NMA1592 COG1304 # Protein_GI_number: 15794485 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 388 1 388 390 754 96.0 0 MKSDLSKITCIEDLRLVAKRKMPRMFYDYIDSGSWTETTYRENTSDFKDIRFRQKVLVDM EGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAEKFGIPFTLSTMSICSIED VAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLTADLQVLGQRHKDIKNGLSAP PKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKNVGDLSSLSSWTSEQFDPRLSWD DVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALVVSNHGGRQLDDTVSAIKALPDVVS AVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIGRAFLYGLGAYGEEGVTRALEILYKEM DISMAFTGHRNIQDVDSSILRSTRWHQDEF >gi|241319421|gb|ACQV01000024.1| GENE 15 14789 - 15235 562 148 aa, chain + ## HITS:1 COG:NMA1593 KEGG:ns NR:ns ## COG: NMA1593 COG1959 # Protein_GI_number: 15794486 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 148 247 91.0 6e-66 MRLTTKGRFAVTAMIDLAMNAQTGAVKLSAISERQSISLSYLEQLFSKLRRAGLVESLRG PGGGYILAAPAEQINIAQIISAAEDRLDATQCGSKANCNHGAPCLTHDLWENLNKTINDY LSSVTLQSIIEQKNCSDSSHVVTFTHIH >gi|241319421|gb|ACQV01000024.1| GENE 16 15287 - 16501 1870 404 aa, chain + ## HITS:1 COG:NMB1379 KEGG:ns NR:ns ## COG: NMB1379 COG1104 # Protein_GI_number: 15677242 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 404 1 404 404 777 95.0 0 MTVKTPVYLDYAATTPVDRRVAEKMIPYLSDIFGNPASNSHSFGWEAEEAVEKARADIAA LINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKTEHKAVLDTMRELERQGFE VTYLGVQENGLIDLEELKAAIRDDTILISVMWVNNEIGVVQDIPAIGEICRERKIIFHVD AAQACGKVPVDVEAAKIDLLSMSGHKVYGPKGIGALYVRRKPRVRLEAQMHGGGHERGFR SGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDIFLKGIEGIEEVYINGDLEHRAPNN LNVSFNFVEGESLIMAVKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSLRITFGRM TTEEEVQFAAELIKSKIGKLRELSPLWEMFKDGIDLNSIEWAAH >gi|241319421|gb|ACQV01000024.1| GENE 17 16755 - 16865 105 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKKVVIKPKFQKWVVGLVIALMLGSGEFHTRPYVS >gi|241319421|gb|ACQV01000024.1| GENE 18 16979 - 17107 343 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEQDLDLDNLDNLLEDFDGVTVEGGVDSENDEGCEGGACKI >gi|241319421|gb|ACQV01000024.1| GENE 19 17176 - 17562 752 128 aa, chain + ## HITS:1 COG:NMA1596 KEGG:ns NR:ns ## COG: NMA1596 COG0822 # Protein_GI_number: 15794489 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Neisseria meningitidis Z2491 # 1 128 1 128 128 243 99.0 5e-65 MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQIKVNDEGIIEDAKFKT YGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPVKIHCSILAEDAVKAAVAD YRKRQENK >gi|241319421|gb|ACQV01000024.1| GENE 20 17825 - 18070 216 81 aa, chain + ## HITS:1 COG:no KEGG:D11S_0049 NR:ns ## KEGG: D11S_0049 # Name: not_defined # Def: hypothetical protein # Organism: A.actinomycetemcomitans # Pathway: not_defined # 1 75 15 89 92 97 61.0 1e-19 MPFTDEEVQSLLAVEGIGKTILQRLQQMGLDDIAKLAAADLDDILEQGAQLTGSTCWRNS PQAKAAIAAAIEWAKQRFQTA >gi|241319421|gb|ACQV01000024.1| GENE 21 18140 - 18460 563 106 aa, chain + ## HITS:1 COG:NMB1381 KEGG:ns NR:ns ## COG: NMB1381 COG0316 # Protein_GI_number: 15677244 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 106 21 126 126 202 92.0 9e-53 MITITENAAKHINSYLTKRGKGLGVRLGVKTSGCSGMAYNLEFVDEVNEDDLIFEEHGAR VYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGESFHV >gi|241319421|gb|ACQV01000024.1| GENE 22 18457 - 18642 217 61 aa, chain - ## HITS:1 COG:NMB1382 KEGG:ns NR:ns ## COG: NMB1382 COG3036 # Protein_GI_number: 15677245 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 59 1 59 73 97 94.0 5e-21 MTGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQEAKKWRDGFDTFPPFFI F >gi|241319421|gb|ACQV01000024.1| GENE 23 18722 - 19222 563 166 aa, chain + ## HITS:1 COG:NMB1383 KEGG:ns NR:ns ## COG: NMB1383 COG1076 # Protein_GI_number: 15677246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Neisseria meningitidis MC58 # 1 166 1 166 166 218 73.0 4e-57 MSQYFNLFQLEPSFNIDTEALEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR TLKSPIDRAAYLLKSQNIDADAPEHTSFSPEFLMQQMEWRETLMDAQMEQNHDAIRALDQ EIQEVQSNLYQDLQQAFENQDYESAAQWVRHGRFLNKLRNEIASIL >gi|241319421|gb|ACQV01000024.1| GENE 24 19331 - 19903 944 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114] # 1 190 1 190 190 368 100 1e-100 MTYEIQASVREAQGTGASRRLRREGQIPSILYGEGQEPVAIAVDHKTVFYALEKESFHTA LIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKL QGGRVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENL AVATVTGKKR >gi|241319421|gb|ACQV01000024.1| GENE 25 19969 - 20994 1008 341 aa, chain - ## HITS:1 COG:NMA1093 KEGG:ns NR:ns ## COG: NMA1093 COG0462 # Protein_GI_number: 15794041 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Neisseria meningitidis Z2491 # 15 341 1 327 327 589 96.0 1e-168 MFSARKSNLESGEDMAAYDSLMVFTGNANPELAQRVVKHLDISLGEATVSKFSDGEVAIE LLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITAAIPYFGYARQDRRPRS VRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIKQQRIEN LTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTCLIVDDMID TANTLCKAAVALKERGADRVLAYASHAVFSGEAVNRIASSEIDQVVVTDTIPLSEAAKKC ERIRQVTIAGLLAETVRRISNEESVSYLFNEDVMTGGMLLP >gi|241319421|gb|ACQV01000024.1| GENE 26 21383 - 22258 565 291 aa, chain - ## HITS:1 COG:NMA1092 KEGG:ns NR:ns ## COG: NMA1092 COG1947 # Protein_GI_number: 15794040 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Neisseria meningitidis Z2491 # 10 288 1 279 281 444 73.0 1e-124 MRSTQIEDAMSVSEEIQAFPAPAKLNLDLRITGRRSDGYHNLESIFCLTGLYDTVHLKMR TDGQIILHTPVEGLEPEQDLTYRAAKLLLPYANVPHGVEIWLDKVIPTGGGLGGGSSDAA TVLMVLNQWWQCGLSRQQLIDLGVSLGADVPFFIFGRSAFAKGVGEKLAEIDVPKQWYVI VKPPVHVATAKIFAHEGLTRDSKPSIMPTFQSLQPFQNDMQAVVFQEYPEVWKAYVELSQ YGYTLMTGSGACLFIASASHQEANTIYQQVSQSYEAYCVEGLDIHPLFHMI >gi|241319421|gb|ACQV01000024.1| GENE 27 22240 - 22824 418 194 aa, chain - ## HITS:1 COG:NMB0873 KEGG:ns NR:ns ## COG: NMB0873 COG3017 # Protein_GI_number: 15676769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Neisseria meningitidis MC58 # 3 193 1 191 193 254 64.0 7e-68 MNLKQLSSIAALLLLAACAQPNLPQQNSWQAAEQVQDFSADGRLAVKVEGKGSYANFDWT YQNAVQTIDVNTPLGNTVGQLCQDSEGVLAVDSKGKVYQAETAEELSRQLLGFALPVQYL HIWADGRRVANAPYKILPDGRLEQFDWTISRTLNSSGQPKTLQLENAKFNIRLVFDTVNH SLDKNGQTRCAARK >gi|241319421|gb|ACQV01000024.1| GENE 28 22881 - 24743 1482 620 aa, chain - ## HITS:1 COG:NMB0872 KEGG:ns NR:ns ## COG: NMB0872 COG0457 # Protein_GI_number: 15676768 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Neisseria meningitidis MC58 # 4 620 2 614 614 572 49.0 1e-162 MLFFPSRIRVAAAAVMMLFATQTFAAPGDSNAVFESAKIIKKKSRADRFSPEEREQERIR LLGIQNRTSQVFTLLNSELALQKGDAASALFTYILTLHRTKSPEVAERALEMAVSLNAFE QAEAIYQKWREIEPEPGEAQKRMTWLRNLLLGKADKNLSGLDKVIAGGSEDEQKRVFLLL AQTAAQQPNLTSDAVKQVHKTALNYKDFPEAAIADAIFSAKDGQKKHAIAALQRLAKLDN EILPPTFVTLRLMAQRHPDILDGFFKETDTKTLSPIWQELDIANLIAHGQNDQAFKRLQT LLEENPNPDLYIQAALLSASKTENISAVNSYLEKAYKAGTEEQRSRAALIGAVSYNDAEE FAKAKQWLDKVTATAYTFDKTILAASIEAKQGNHKEAWALVQRAQKMPEQRGRYFEASDL LNTALLVLSKNTNLQESLNALNSLVNSTEKSLKTQASPELLANVLYQRSMVYEKLNQPGK AIADLRRVVELYPDNPHGWNALGYTLLSNGKDLEEAFKMVQTAYQMEPESAAINDSVGWA YYLKGDAQMALPYIQYAYEKEPEAEVAAHLGEVLWTLGDQDKAKEIWNDGLKRGSNLRVL KETMSKFGITSSKPHTQKHK >gi|241319421|gb|ACQV01000024.1| GENE 29 24919 - 25524 461 201 aa, chain + ## HITS:1 COG:BMEI0462 KEGG:ns NR:ns ## COG: BMEI0462 COG0494 # Protein_GI_number: 17986745 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Brucella melitensis # 20 192 32 204 207 118 39.0 9e-27 MNTDHLIHFLTQASRFSSRMQAERNQLVTPKTVKETAVLVGIVLHEGAWQILLTKRAETL RQHTGQIAFAGGRKDTQDDSLTATALREAYEETAIPITTWQTFAPLPFYDTPSGYRVTPV PAVCTHSVNPKANPDEVAEIFYLPLSFALNLRNYTFRQLHHNNQTLALPALPFRHYDIWG LTAIILYGLAERYQQYCQAFK >gi|241319421|gb|ACQV01000024.1| GENE 30 25787 - 27079 1686 430 aa, chain + ## HITS:1 COG:NMB1432 KEGG:ns NR:ns ## COG: NMB1432 COG0128 # Protein_GI_number: 15677291 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Neisseria meningitidis MC58 # 1 429 1 429 433 774 89.0 0 MTESIRLPASTLKPSTVALPGSKSISNRTLLLAALSDNVCEIHSLLKSDDTDRMLEALDK LGVHIESLPEGRLKVHGTGGRFPNQTADLFLGNAGTAFRPLTAALAVLGGDYHLHGVPRM HERPIGDLVDALRIAGADVQYLGNENYPPLQISKRQDNGERVIPIKGNVSSQFLTALLMA LPLTGQAFEIHMVGELISKPYIDITLKLMAQFGVDIINEDYRVFKIPAGANYHAPEHLYV EGDASSASYFLGAGLIAGTPIRVTGIGAHSIQGDVAFARELEKIGADVIWGENFVEISRP AERKIQAFDLDANHIPDAAMTLAIVALATKQPCTLRNIGSWRVKETDRITAMATELRKLG ADVIEEAEAIHITPPETLTSDAVIDTYDDHRMAMSFSLASLLGIPVIINDPKCTHKTFPD YFQVFTSLTN >gi|241319421|gb|ACQV01000024.1| GENE 31 27227 - 28273 1611 348 aa, chain + ## HITS:1 COG:NMB1445 KEGG:ns NR:ns ## COG: NMB1445 COG0468 # Protein_GI_number: 15677302 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Neisseria meningitidis MC58 # 1 348 1 348 348 611 90.0 1e-175 MSDEKSKALAAALAQIEKNFGKGSIMKMDGSQQEENLDVISTGSLGVDLALGVGGLPRGR VVEIFGPESSGKTTLCLEAIAQCQKNGGICAFIDAEHAFDPIYARKLGVKVEELYLSQPD TGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTG HIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGN ETKVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDLGVKHDIVEKSGAWYSYNGAKIGQ GKDNVRVWLKENPDIANEIDAKIRAAVGINVDITEGKLDDTDGERPEE >gi|241319421|gb|ACQV01000024.1| GENE 32 28369 - 29217 473 282 aa, chain - ## HITS:1 COG:PA3628 KEGG:ns NR:ns ## COG: PA3628 COG0627 # Protein_GI_number: 15598824 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Pseudomonas aeruginosa # 1 280 1 281 283 263 47.0 2e-70 MKNSELHLLERRKMFNGHQERYRHLSQTCRTDMVFDVYLPPQVLKGYPAPVLYFLSGLNS DGSELVRQSGIQRFAAQWNIIVVFPDTSPRGQHVADSEEHYLGQGAGFYVNATEAPWAQH YQMESYISQELPDLIGHNFLVTKERSIAGFSMGGHGALHLALNYPGRYAAVSAFAPLCHP IDTEGGRQAFSAYLGQNVETWKRYDSTELLQTASHKLPVLIDVGSEDALYPDVLQPEAFV RSAREKGFNIQYKVRPGYGHDYFFIASFIDSHIEFHAQALGL >gi|241319421|gb|ACQV01000024.1| GENE 33 29718 - 31430 2431 570 aa, chain + ## HITS:1 COG:NMB1339 KEGG:ns NR:ns ## COG: NMB1339 COG0442 # Protein_GI_number: 15677205 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 570 1 570 570 1103 95.0 0 MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMPMGLRVLRKVENIVREE MARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDRDFCMGPTCEEVIADIVRK EVNSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDAYSFHADYASLQTTYQNMYDA YCRIFTRLGLKFRPVAADTGSIGGTGSHEFQVLAESGEDVIAYSDTSDYAANIELAPTLP LKGERAAAQAELTKVHTPNVKTIESLVEFLNIPVEQTLKSIVVEGENEGELILLLLRGDH EFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGGSLGPVNFKGKVYADFATEKGADWVIG ANEDDYHYTGFNFGRDAAEPEFVDLRNVIEGDISPDEQGRLKLARGIEVGHVFQLRDKYT QAMNVSFLDNNGKSQIMEMGCYGIGITRVVAAAIEQNNDEKGIVWTKAMAPFEVVIVPMN YKKSEAVREAADKIYAELLAAGADVLLDDRDERAGVLLNDSELLGIPHRIVIGDRALKEG NVEYAERRDNQAQAVAVSEVVAKVLTALNA >gi|241319421|gb|ACQV01000024.1| GENE 34 31497 - 32303 811 268 aa, chain - ## HITS:1 COG:YPO1381 KEGG:ns NR:ns ## COG: YPO1381 COG1180 # Protein_GI_number: 16121661 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Yersinia pestis # 25 268 3 244 244 343 62.0 2e-94 MSTTFAITPEPELKDLGHRHYNGKGIIHSIESCGAVDGPGLRYVLFLQGCLMRCLYCHNR DTWDLHTEQAQELDVATVMKQVMTYRHYLRATGGGVTATGGEPLLQYEFVRDWFTACREH DIHTCLDSNGYALHYDSILDDLLDHTNLVMLDLKQIDPEIHKVLVGIPNTKTLKFARYLA ERNQPMRVRYVVVPGYTDDERSAHLLGEFIGDMDNVEMVELLPYHELGAHKWALCGDEYK LKGVHPPPKETILKIKEILESYGKNIIY >gi|241319421|gb|ACQV01000024.1| GENE 35 32442 - 34727 3076 761 aa, chain - ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 1 761 3 772 772 1308 80.0 0 MSNDVQQRPAAWEGFTGGNWETNVDVRDFIQKNYTPYEGDASFLAPATEATTKLWADVLE GIKVENRTHEPYKIDAQIISGITSHAPGYINKDLETIVGLQTDEPLKRSIMPFGGLKMVQ DACKVYNVELNPEVSEIFTKYRKTHNQGVFDVYTPDIRRCRKSGVITGLPDAYGRGRIIG DYRRVALYGIDFLMKDKFNQFNSLQADLENGVDLEEVIRRREEINEQYKALGQMKEMAAS YGYDISGPAKNAQEAIQWTYFAYLAAVKSQNGAAMSFGRVSSFLDIYIERDLKNGVITET QAQEFIDHLVMKLRMVRFLRTPEYDQLFSGDPIWATESIGGMGLDGRTLVTRTNFRVLHT LYNMGPSPEPNITVLWSEQLPQGFKEYCAKVSIDTSSIQYENDDLMRPDFNSDDYAIACC VSPMIVGKQMQFFGARANLAKTLLYAINGGVDEKSKEQVGPKTEPIMDEVLDYDTVFARM DKFMDWLATQYVTALNIIHYMHDKYSYEAALMALHDRDVIRTMACGIAGLSVAADSLSAI KYAKVKPIRDENGIAVDFEIEGEYPQFGNNDDRVDDIACDLVERFMKKVATHKTYRNATP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDVNGAVASLTSVAKLPFEFA KDGISYTFSIIPGALGKDEHSRERNLAGLMDGYFHHEDGILEGGQHLNVNVLNRETLEDA MHHPEKYPQLTIRVSGYAVRFNSLTREQQLDVITRTFTETM >gi|241319421|gb|ACQV01000024.1| GENE 36 34842 - 34940 59 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTYVNENNCYLALHLGFQTLAFKNGVEYKIQP >gi|241319421|gb|ACQV01000024.1| GENE 37 35046 - 35129 78 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLNLIFKMQNLSDFSYFLLDIRKVLVN >gi|241319421|gb|ACQV01000024.1| GENE 38 35209 - 36507 1856 432 aa, chain - ## HITS:1 COG:NMA1024 KEGG:ns NR:ns ## COG: NMA1024 COG0104 # Protein_GI_number: 15793980 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 1 432 1 432 432 809 94.0 0 MAKNVVVIGAQWGDEGKGKIVDWLAEETSGVVRFQGGHNAGHTLVVGGKKTILRLIPSGI LHETLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIAPTCPLILPYHIALDQARE ASRGKSKIGTTGRGIGPAYEDKVARRAIRVVDLLYPEKLIEKLEAVLAYYNVQLQHLHNA EPVKVEDVMAVIEKVAPRITPMITDVSRVLNEKNRKGESLLFEGAQGTLLDIDYGTYPFV TSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVGSGPFPTELFDEVGAGLAERGHEFG SVTGRARRCGWFDAAALKRSIQVNGISGMCITKLDVMDGIENINICVGYELPDGSKTDIL PCGSDAVETCKPIYETMPGWSESTFGVKEYDKLPENAKAYLKRIEEVCGAPVAIVSTGPD REETIVLHHPFA >gi|241319421|gb|ACQV01000024.1| GENE 39 36551 - 37708 1055 385 aa, chain - ## HITS:1 COG:NMB0814 KEGG:ns NR:ns ## COG: NMB0814 COG3705 # Protein_GI_number: 15676712 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Neisseria meningitidis MC58 # 1 381 1 381 383 613 82.0 1e-175 MKSWQLPEHVADVLPTNARQLESARERLLALFRVHGYELVQPPLMEYSHSLLTHIDAGLS LKTILVVDQLSGRQLGIRADITPQVARIDAHLLSANQGINRLCYAGSVLHARPDGLLNMR EPLQAGAEMYGLEGIEADIELIDLMLKSMKIADMGEVLLSLGHIGVFRALANAAHLNEQQ SATLLSSMQDKDAEAVSQLVKEWKLDGMWAKAFSLLPRLYGGREVLTLAREKLPELSAVS VALDELQAVCDAFPNQKVHIDLSELRVDNYHTGLLYAAYGSNRHDAVARGGRYDGLGGYF GRARPAAGFSFDLRSFIGRLPAIGRESVVAVDVKDMPAAQEAVDALREQGQCVVIDYGIG YNGSEEVTGRLKQVDGVWKVIALND >gi|241319421|gb|ACQV01000024.1| GENE 40 38030 - 38833 1190 267 aa, chain - ## HITS:1 COG:NMB0703 KEGG:ns NR:ns ## COG: NMB0703 COG4105 # Protein_GI_number: 15676601 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Neisseria meningitidis MC58 # 1 266 1 266 267 443 88.0 1e-124 MKKILLVVSLGLALSACANKGTIDKDAQITQDWSVEKLYAEAQDELNSNNYTRAVKLYEI LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKGLVLF NEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDALGGN EMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEEALAMMELAYKKLDKPQLAADTRRV LETNFPQSPFLQHEWRSDDMPWWRYWR >gi|241319421|gb|ACQV01000024.1| GENE 41 38832 - 39956 1506 374 aa, chain + ## HITS:1 COG:NMB0704 KEGG:ns NR:ns ## COG: NMB0704 COG0564 # Protein_GI_number: 15676602 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis MC58 # 1 374 1 374 374 665 89.0 0 MQNTSFDNEADYSDDLDFPSSPETESCVNLTVPLEMAGGRLDAVLAKLMPDYSRSRLSSW IKEGAVIVNDKPAQPKDKMIGGELIAVTVRPSEENLAFTPEPMDLDIIYEDDAVIVINKP AGLVVHPAAGNWSGTLLNGLLAHCPELSQVPRAGIVHRLDKETSGLMVVAKTLPAQNSLV QQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRLKMAVVKFGGKPAITHVKVLERY LSHSYIECSLETGRTHQIRVHMREANHPLAADPVYGNLRHPCSDAVKEAIKALGARQALH AYRLSFVHPKTGETVAFEAPMPDDMYHLLSVLRLEAGLDSSLSNEEEWQEKFGMDDDDNW NEDDYDVEVVYVRD >gi|241319421|gb|ACQV01000024.1| GENE 42 40047 - 40631 322 194 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1343 NR:ns ## KEGG: ECDH10B_1343 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 24 179 22 171 204 68 25.0 9e-11 MNIEMFNLLFSKLMTENLGTIEDGLKTNDEIGAVLRIHLICEQFLELYICSICNQEKMFW FQEKEDKEEQKITISFDHKLKMAKTLGLPDWGYKIFTNVNKIRNRLAHRVGQQIDQGKFE SIQNTVKSDIEPLQIFNIPLEQVGIATQSETGQMSSKLDWDECSTPHQKLLMYIYYTLMS LTGYLNLPKTPTTT >gi|241319421|gb|ACQV01000024.1| GENE 43 40628 - 41398 1085 256 aa, chain + ## HITS:1 COG:NMB0706 KEGG:ns NR:ns ## COG: NMB0706 COG1496 # Protein_GI_number: 15676604 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 255 1 255 259 421 83.0 1e-118 MKTITDTLNLAPQGKNFLTADWPAPANIKTLITTRNGGVSEGVYRSLNVGSHVGDKLEAV LRNREIVQEQVGLPVAYLNQIHSSIVVNATEALGNTPDADASVDTTGTVACASMTADCLP VLFCDKAGTVVAAAHAGWRGLAGGVLQNTIAAMNVEPLEIMAYLAPAIGPDAFEVGQDVF DAFCTPMPEAANAFEDIGGGKYLADIYALARMVLHREGVNMIYGGTHCTVLERDTFFSYR RDGQTGRMVSLIWLEK >gi|241319421|gb|ACQV01000024.1| GENE 44 41519 - 41998 780 159 aa, chain + ## HITS:1 COG:NMA0912 KEGG:ns NR:ns ## COG: NMA0912 COG2980 # Protein_GI_number: 15793877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 177 54.0 7e-45 MKKILLPALALLLASCGFHLKGTGVTSQPLPYQNWHVEGGAVMQKALENALRRADGHPVS EAESQITLRVVDFQKRRDIYTITRAAAINEYLLAMTVKVQAFRNGEPVGEPIEVKVHRTM DYADSEVLGKQEEEETIWSEMRIDAADQIVRRLTFLKAQ >gi|241319421|gb|ACQV01000024.1| GENE 45 41998 - 42999 1555 333 aa, chain + ## HITS:1 COG:NMA0913 KEGG:ns NR:ns ## COG: NMA0913 COG1466 # Protein_GI_number: 15793878 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis Z2491 # 3 332 2 331 332 496 80.0 1e-140 MAAAPIESLRPDTPLKPLYIIHGEEDLLRIEALDTLRAAAKKQGYLNREVYTAENNFDWN ELLQSAGSAGLFADLKLLEIHIPNGKPGKNGGDALQTFAERLPEDTVTLILLPKLEKAQI QSKWFSALAGKGIVLEAKAVAPYALPQWIQGRLKQQGLDIEPEALALFAERVEGNLLAAR QEIEKLALLHPQGHLINIADAEAAVATVARFDVFQLAGAWMKGDALRVSRLLDGLEEEGE EPVLLLWAVAEDIRTLIRLTAALKQGQNIQSLRNSLRLWGDKQTLAPMAAKRISINRLLD ALKTCAKIDRIIKGAEEGDAWTEFKQLVTSLAA >gi|241319421|gb|ACQV01000024.1| GENE 46 43146 - 43565 559 139 aa, chain + ## HITS:1 COG:no KEGG:NMC0659 NR:ns ## KEGG: NMC0659 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 139 1 139 139 229 92.0 2e-59 MDNKTKLRIGGLALLTTAVLSLIIVLIVDSWPLAILLAVIIVAAAAGGFVWTSRRQQRQF LERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLVCLSQKCSVDEAHAIFKKRPTR QEMNQIAAQQARGQKRPHR >gi|241319421|gb|ACQV01000024.1| GENE 47 43657 - 44181 576 174 aa, chain + ## HITS:1 COG:NMA0915 KEGG:ns NR:ns ## COG: NMA0915 COG1714 # Protein_GI_number: 15793880 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis Z2491 # 4 170 3 169 170 226 73.0 2e-59 MTHLPTAPLKRRLAALVYELLLTGAVTSIAALAAGIVAIFLNPVSIRLSMLTTCLILFYA WWLYFRANWHKKGQTLAMQTWKIGLADKNDTQPPLPQLRLRFIWASIFIVFIPLFAYAGL RHLLNIPPKGAFGAALIWLILPWGFALFHPDRQFLYDFLAGTRLVDLNQKKTNE >gi|241319421|gb|ACQV01000024.1| GENE 48 44276 - 45397 1453 373 aa, chain - ## HITS:1 COG:NMB1703 KEGG:ns NR:ns ## COG: NMB1703 COG0304 # Protein_GI_number: 15677551 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Neisseria meningitidis MC58 # 1 367 39 414 416 480 68.0 1e-135 MDWSERFPELEAQLGAPIEGYSPPEHWTRKQLRSMGRVSHLCVDAAEQALTDAGLLGDER ITDGRMGVACGSSVGSTKDIGDMGELLLTGTSRNFNANTYVRMMPHTTAANIGIFFGLKG RIIPTSSACSSGSQGIGYAYEAIKYGMIDMMLAGGGEEFCPSEVYVFDSLYAASRRNGEP ELTPRPYDNARDGLVIGEGAGIFVLEELEHARARGAKIYAELVGYGANSDGSHVTQPQKE TMQKCMELALKDAGITPDKVGYVSGHGTATEKGDIAETLATEAVFGFVPMSSQKSYLGHT LGACGALEAWFTIEMMNNGWFAPTVNLENIDPRCGKVDYIQTGGREIQTDYVVSNNFAFG GVNTSLVFKRWQE >gi|241319421|gb|ACQV01000024.1| GENE 49 45505 - 46233 207 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 209 3 211 259 84 30 4e-15 MSETILITGSNRGIGKAVALGLAQDGFDIVVHCRSRRDEAEAVAEEIRTLGRNARVLQFD VSDREACREILTADIEANGTYYGVVLNAGLTRDNAFPAFTDDDWDLVLRTNLDGFYNVLH PLTMPMIRRRKAGRIVCMASVSGLTGNRGQVNYSASKAGLIGAAKALAVELAKRKITVNC VAPGLIDTDIIDENVPVEEILKAVPAARMGLPEEVAHAVRFLMDEKAAYITRQVIAVNGG LC >gi|241319421|gb|ACQV01000024.1| GENE 50 46299 - 46787 405 162 aa, chain - ## HITS:1 COG:NMB1701 KEGG:ns NR:ns ## COG: NMB1701 COG4706 # Protein_GI_number: 15677549 # Func_class: I Lipid transport and metabolism # Function: Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase # Organism: Neisseria meningitidis MC58 # 1 157 1 157 166 200 63.0 8e-52 MPSIPSAPIYDVASLLPHSGHMVLIDCVKEFGDDYTVCRAPVGDKHILLKDGVLPSMAYM ELMAQGIGAFAGIEALKAGEPVRLGFLLGTRKLDLFADSVPVGTELEVRAHVSIQDLGGM GVFDCELRWTDAPEDVKHLLPPDGLLAKASLNVYSPKDGQII >gi|241319421|gb|ACQV01000024.1| GENE 51 46898 - 47659 524 253 aa, chain + ## HITS:1 COG:no KEGG:NGO1349 NR:ns ## KEGG: NGO1349 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 27 250 6 227 249 254 61.0 3e-66 MPQNVCRFSFNIAAWQASSSKISTPEQWQDWAQGKLDTASLPECKPALSFLPPMQRRRLG KAARLVCDAAWNLADQYPESVPVYVSHDGESNRSFELWQELLNTHTVSPTSFGLSVHNAT IGQWSMLRKDMSEHTALAVAADSFETALAEAFALLQDGAPSVLIIVADDPLSEDYPVLAT RAPFAYALALVITKGEDYTLSLETTSERPSENPNDTTVEPYWSSLEWVRFLLSDGRQHTQ HYAGRNWHWQKNT >gi|241319421|gb|ACQV01000024.1| GENE 52 47656 - 48414 829 252 aa, chain + ## HITS:1 COG:NMB1698 KEGG:ns NR:ns ## COG: NMB1698 COG0204 # Protein_GI_number: 15677546 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis MC58 # 1 251 1 251 252 402 74.0 1e-112 MKTLDYFRRFFATLFGFILFGVAGVLFKIALLPYTLKSTKGDIKRQLEARRMIGRVWRFF VGYLQWSGVLSVRFNGLEKLGRPGQLILANHPSLLDIVLLISHYSEPNVLVKKDLLNNPS MKSQIIASGYIPNDESMEMLEEIDAVFKSGQSMLIFPEGTRTGWDGQVKMHRGAVSLGLR SASVITPVCIKMTPPNFKKGQPWYKIPPHKIHYEITVGDDILPEEWLAEKPLPIAARRLN EYLQDYFTRKTT >gi|241319421|gb|ACQV01000024.1| GENE 53 48411 - 48671 550 86 aa, chain + ## HITS:1 COG:NMB1697 KEGG:ns NR:ns ## COG: NMB1697 COG0236 # Protein_GI_number: 15677545 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis MC58 # 1 86 1 86 86 124 84.0 3e-29 MNNLENQIKELIIDSLGLEDITPADIGSEDPLFGDEGLGLDSVDALELGLAVQKTFGFQL DGENDNLRDNFANVKTLAEFVKSRQA >gi|241319421|gb|ACQV01000024.1| GENE 54 48684 - 48935 662 83 aa, chain + ## HITS:1 COG:NMB1696 KEGG:ns NR:ns ## COG: NMB1696 COG0236 # Protein_GI_number: 15677544 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis MC58 # 1 80 1 80 81 103 85.0 8e-23 MTEQEVRTLLTDALVNLFEIEPERIKPETNLYEDLEIDSIDAIDLIDHIKRETGRKLQAE DFRNVRTVEDVVQAVLKVQAQDS >gi|241319421|gb|ACQV01000024.1| GENE 55 49008 - 49547 586 179 aa, chain + ## HITS:1 COG:NMA1954 KEGG:ns NR:ns ## COG: NMA1954 COG4648 # Protein_GI_number: 15794837 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 36 179 1 144 144 181 70.0 4e-46 MKILGKLLLTLASIAYPLLWYYGRENGAFFWLAAAMCVLWLIRAAMPQTTAQRITAIILA AFFAAVLVFRRPDSMYWYPVAVNALMLAVFGGSLFAKQTVIERLARLQHPDLPPEGVRHT RRVTQIWCGFFILNGATAAILAGLQYYDWWAAYTGVVSYVLMGILFAGEWVYRKLVLKV >gi|241319421|gb|ACQV01000024.1| GENE 56 49587 - 50342 318 251 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760160|ref|ZP_04758258.1| ## NR: gi|241760160|ref|ZP_04758258.1| putative lipoprotein [Neisseria flavescens SK114] # 1 251 1 251 251 472 100.0 1e-132 MKKIILLTLISFTFTACSSTSKTPLHPEEKAEAEYKKNYTEVASHTIKTRSGNLTVIDRI HNSYSDDTTASSMNLMIIRKSNTVKARAAQTAVFTATFALLILARNSNHFGYEGPDLLDK HNLSGKPIKPNFANPAFEQFSPKVRDWAAKRSFKGNSANKKLFVQPGRFYLVYEKFNKRD RFLLNNEVSLFVDGQNGKTDRLLHCFKRSESHSLEEWQANDYELVRQTTNKQYDECLAQF KEDTKANTSKL >gi|241319421|gb|ACQV01000024.1| GENE 57 50358 - 52061 1719 567 aa, chain + ## HITS:1 COG:RSp0367_1 KEGG:ns NR:ns ## COG: RSp0367_1 COG0365 # Protein_GI_number: 17548588 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 48 441 51 438 438 169 34.0 2e-41 MHLTRILSPDLPQHDLIATHPNWTRADFNRAVFHLSGRLKQAGVQTAALWFDDAALFACA VLAVWHSGGKVLLLPNLAQDNLDWGKTAEAFLTDSTDKKLSSDGLNIWHLPDILAKTDLE GLNTYPENHLIPDHAEAWLKTSGSSGEAQIIVKTTAQMQAEALTLANTLPFGRHGETVIG SVIPQHLYGFTFRFALALTMGWTMERQQAVYPENLLSSTAAHDKVVWIASPAVLNRLGEN RNWQSIGHKIAGIVSAGGALPAATADLLQQAAVRPFEVYGSTETGVIASRCERQEWQPFN GVEIGQNEEGALWASSPWSPERRQTADLIEPQDDGFLLLGRQDRIIKFEDKRVSLTQIEH ELLQHPWIADAHCGRHPQHQRIAIWAALNADGIAALREKGRAAVADTLKRHLAATQDTIA LPRYWRFTDSLPRNAQAKIAAADFQTAFTVAQTSPVWSKTSSDDETNTETFIGRVPLDLV YFGGHFATFPLVPGVVELQWVRNLIAPQPWGKQSIIRIENLKYQQFIRPHDEVSVALKYD EGKNKLSFKINNGEHPCASGRIVFEAV >gi|241319421|gb|ACQV01000024.1| GENE 58 52098 - 53186 1406 362 aa, chain + ## HITS:1 COG:Z4850 KEGG:ns NR:ns ## COG: Z4850 COG0500 # Protein_GI_number: 15803988 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 11 360 2 351 352 337 47.0 3e-92 MQLFPALEQRYSHEHQSAGEAQRLAQEIAFAPIVFQVSRLMVKFGILDLLNDHPDGLTQA EIAEKAKISNYAAQVLLEASLSIGTVLTRDNRYFISKAGWFVLKDKMARVNMDFTQEICY QGMFDLEKTLQTGKPEGLKVFGDWPTIYEGLSSLPSIAQEKWFAFDHYYSDNSFAEALNT VFAKPVKKLLDVGGNTGRWAEQCVNHNAEVEVTIMDLPQQIGLMREATKGKNGADRIHAH PANLLDPEIPFPTGFDAIWMSQFLDCFTEEQATSILQRAAASMSENTSLYIMEPFWDRQR YETAAYCLTMTSLYFTAMANGNSKIFHSEDLIRCVEKAGLKVAEISDGIGRGHSILRCVK AV >gi|241319421|gb|ACQV01000024.1| GENE 59 53278 - 53934 669 218 aa, chain - ## HITS:1 COG:NMA1368 KEGG:ns NR:ns ## COG: NMA1368 COG3658 # Protein_GI_number: 15794289 # Func_class: C Energy production and conversion # Function: Cytochrome b # Organism: Neisseria meningitidis Z2491 # 1 189 1 189 218 251 66.0 7e-67 MKQKIKVWDAPTRLFHWLLVLMMGFMWYSATQGGDMLVWHLRGGLLMLALVVFRMCWGIW GSDTAKFSRFVRPFSEIRRYTQGQMSEDELVGHNPLGALMVIALLAVLFFQMATGLFAAD ENTFTNSGFLNHLVSEHAGTLARKIHVNFFNVLAVLAGVHIAAVLLYRFVKKQDLITPMI NGFKTIDAKQPKLAGVGQLLAALSVAIALVCAVWMLRG >gi|241319421|gb|ACQV01000024.1| GENE 60 53988 - 54869 435 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 27 288 242 500 500 172 41 1e-41 MQPIYMLPESLQAFQTALAFPDVFRPRAQESHKGTYGTLAIIGGATGMSGAVVLAATAAM YQGCGKVWAGFNQATLPFAIIPERPEIMLATAAQLMERNDVSARVIGCGFGLDGLSGQLL PQILSTHHNQPLLLDADALTLLARSSELAERLKSYTHIVLTPHPAEAARLLGADTQSVQA DRQKAVTEISRKYGATVVLKGHHTLVATADGIVYTNTSGNAGLATAGSGDVLSGIIGSLL AQGIPTFQAACAGVWLHGAAADVIKYSSQIETGMLAGEIAPVARWLRNILSKE >gi|241319421|gb|ACQV01000024.1| GENE 61 55019 - 55966 1240 315 aa, chain + ## HITS:1 COG:NMA0909 KEGG:ns NR:ns ## COG: NMA0909 COG0385 # Protein_GI_number: 15793875 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Neisseria meningitidis Z2491 # 1 314 1 314 315 459 93.0 1e-129 MNTLNKISNFIGKTFSLWAALFAGIAFFAPDTFKWVGPYIPWLLGVIMFGMGLTLKPSDF DILFKHPKAVIIGVIAQFAIMPATAYLLAKLLNLPAEIAVGVILVGCCPGGTASNVITYL ARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAGGMLMSIVKMVLLPIVLGLIV HKILGNKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIIESGLLIFAVVVLHNGIGYLLG FFAAKWTGLLYDAQKTLAIEVGMQNSGLGAALAAAHFAAAPVVAVPSALFSVWHNISGSL LATYWAAKADKNKES >gi|241319421|gb|ACQV01000024.1| GENE 62 56036 - 56599 825 187 aa, chain - ## HITS:1 COG:NMB1030 KEGG:ns NR:ns ## COG: NMB1030 COG2353 # Protein_GI_number: 15676917 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 187 1 187 187 285 77.0 4e-77 MKKIMFALCSAMLASAASAAVYKVDEFHANARFAIDHFNTSTNVGGIYGLTGNLEFDRAK RQGSIDIVLPLSKLQTSSDHFTQHLKSADIFNADKYPEIRFVSTKFNFNGKKLLSVDGNL TMNGKTAPVKLKADKFNCYQSPMAKAEVCGGDFSTSIDRTKWGLDYLVSAGMSKKVNINI QIEAVKQ >gi|241319421|gb|ACQV01000024.1| GENE 63 56878 - 58737 2955 619 aa, chain + ## HITS:1 COG:NMA1361 KEGG:ns NR:ns ## COG: NMA1361 COG0129 # Protein_GI_number: 15794282 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis Z2491 # 1 619 1 619 619 1222 97.0 0 MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAIANSFTQFVPGHVHLHNMGQLV AREIEKAGGIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIADSIEYMVNAHCADALVCIS NCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLIDAMIESADDNIT DKQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSYLATHAGRKELFLEAGR MIVEITRRYYEQDDETVLPRSIANKKAFENAMTMDIAMGGSTNTILHLLAVANEAGVDFK MADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGGIFAILKELDKAGKLHTDVYTIHAPTL KDAIEKWDVTNPENTHAIERFKAAPGGVRTTQAFSQNRMWKTLDLDREKGCIRNVEHAYS QDGGLAVLFGNIAERGCVVKTAGVDESILKFTGRARVFESQEAAVEGILGNQIVAGDIVI IRYEGPKGGPGMQEMLYPTSYLKSKGLGKACALLTDGRFSGGTSGLSIGHASPEAAEGGA IGLVHEGDTIEIDIPNRSIHLVISDEELAARRAEMEARGSKAWKPENRDRYVSAALRAYG AMATSADKGAVRDVSQIER >gi|241319421|gb|ACQV01000024.1| GENE 64 58806 - 58937 113 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKFILAMIGMAIALLIIIGGGFIAVEYFKSHPEAFQVKPLSK >gi|241319421|gb|ACQV01000024.1| GENE 65 59006 - 60295 1449 429 aa, chain + ## HITS:1 COG:no KEGG:NGO0683 NR:ns ## KEGG: NGO0683 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 427 1 424 426 422 50.0 1e-116 MKHILYWLGGFAVALGIFQYYETHRYSEDQLIYAQPPQNRSAVADFDALAYLNFLRSSAN LPALAHSDTLERAARNHARYLLQNPDDGHDEHNTRNPFYTGPRPSDRTRKAGYAYKGVHE NVSTGQHPPNEKINDHLPAQHQLDNLMTAIYHRLSLLDQNIDEAGAAFESQGKQIALSIN QGDSRFNNLCQKNRPLSDLSRSFYQDACHGHAIIYADEISNRKLRPYITYPQGNFASPVF HGERPDPMPHYEMTGNPVSIAFSEQSPPVKMRSFKLYQDTKEIRDVKILDKDNDPNRLLT ERQFALFPLQPLEYDTDYRAVFEYRQNGKDKTAEWTFSTQKPDYPYFIVKGGETLAIESG QKYFIHWQDFWCLKQCERYNYRMNHDTQLDIIERQAGGIIIRVNGSKGSSIRLMPEGEDR RAITLYLWK >gi|241319421|gb|ACQV01000024.1| GENE 66 60372 - 60605 271 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|284799805|ref|ZP_05984917.2| ## NR: gi|284799805|ref|ZP_05984917.2| putative membrane protein [Neisseria subflava NJ9703] # 1 77 30 106 106 124 97.0 3e-27 MTKHPQTAANTRYAFASIAAMLAAFLLFVAVMLLPLGLTADTQVSLIRFSLYAIVLFAVL GGIFSVRVAYLRKKNGA >gi|241319421|gb|ACQV01000024.1| GENE 67 60607 - 61038 585 143 aa, chain + ## HITS:1 COG:NMA0955 KEGG:ns NR:ns ## COG: NMA0955 COG3536 # Protein_GI_number: 15793912 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 5 124 10 129 130 174 71.0 3e-44 MTQADKIPQEIRLQQERRVLTLVYVDGAKSLPAEYLRVYSPSAEVRGHGPGQDVLQTGKA EVSITDLDPVGQYALKITFSDGHDSGLYDWDYLYRLAHNKDALWQDYLDRLEKAGASRTP SAEDLKPKHTHSCGSGGCGGKAV >gi|241319421|gb|ACQV01000024.1| GENE 68 61121 - 61423 363 100 aa, chain + ## HITS:1 COG:elaC KEGG:ns NR:ns ## COG: elaC COG1234 # Protein_GI_number: 16130203 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli K12 # 1 100 213 311 311 79 40.0 2e-15 MAIFSDTKACPQAVRAAQNTGVLVHEASFAADDEETAERVFHSTASDAAKLALQANVKQL YLTHISARYTEEGQRLMLERQAQTIFPASKVVGDFDVFDI >gi|241319421|gb|ACQV01000024.1| GENE 69 61453 - 62190 326 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 25 244 1 221 221 130 35 6e-29 MSDHKTHFGFTTVDEDEKAGKVAEVFHSVAKNYDIMNDVMSGGLHRVWKHFTINTARLKK GDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGRDRLLNEGMILPVSLADAE KLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGTLLVLEFSKVYKPLEGVYDLY SFKLLPIMGKLIAKDADSYQYLAESIRMHPDQETLKQMMLDAGFDNVDYHNMSAGIVALH KGVKF >gi|241319421|gb|ACQV01000024.1| GENE 70 62357 - 63487 1362 376 aa, chain - ## HITS:1 COG:NMB1594 KEGG:ns NR:ns ## COG: NMB1594 COG0687 # Protein_GI_number: 15677444 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis MC58 # 1 375 1 375 376 658 89.0 0 MTKHLPLIVLTALALAGCGGSDKTSADKAAQTDNQKVLSIYNWSEYVDPETVAAFEKKHG IAVTYDVYDSDETLESKVLTGKSGYDIVGPSNAFVGRQIKAGAYQKIDKSLIPNYKNLNP QLMKLMEGVDPGHEYAVPFYWGTNTFAINTERVKKALGTDQLPDNQWDLVFNPEYTSKLK QCGISYLDSAAEIYPMVLNYMGKNPNSSETADIKAATEVLKKNRPYIKRFTSSGFIDDLA RGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPKEGVGIWVDSFVIPKDAKHVANAHA YINDFLDPEVAAKNGNFVTYAPSSKPAQELMDEEFRNDNTIFPTDEDLKNSFIMVPIQPA ALKFMVRQWQSVKAGT >gi|241319421|gb|ACQV01000024.1| GENE 71 63738 - 66362 3929 874 aa, chain + ## HITS:1 COG:NMB1595 KEGG:ns NR:ns ## COG: NMB1595 COG0013 # Protein_GI_number: 15677445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 873 1 873 874 1659 97.0 0 MKTTELRQKFLKFFESKGHTIVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRPYNRA TTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLN IPKDKLLATVYAEDDEAYNIWLNEIGMPAERIVRIGDNKGAKYASDNFWQMGDTGPCGPC SEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKPSVDTGMGLE RMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSMEEPSLKVIADHIRSCSFLIADGVLP SNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLVADLVKEMGDAYPELKEKQAQIEEALK NEESRFAQTLETGMALLENALAKGSKKLDGEIIFKLYDTYGFPYDLTADICRERNIELDE AGFEREMEAQRARARAAQSFKANAQLPYDGQDTEFKGYSERQTESKVLALYKDGEQVNEL NEGDEGAVVIDFTPFYAESGGQVGDVGYIFAGENRFEVHDTQKIKAAVFGQFGVQTSGRL KVGDSVTAKVDDEIRNANMRNHSATHLMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQ AVTAEEIAEVERRVNEAILANVAVNAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFS TELCGGTHVSRTGDIGLFKIISEGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETK AQTEKDVLAKIQAGAAHAKALEKELARAKAELAVHAGAKLLDNAKDLGAAKLVAAQIEAD AAALREIVTDLTGKSDNAVILLAAVNDGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGK GGGRPDLAQAGGTDAAKLPEVLNSVKDWVGAKLA >gi|241319421|gb|ACQV01000024.1| GENE 72 66434 - 68047 820 537 aa, chain + ## HITS:1 COG:VNG6097C KEGG:ns NR:ns ## COG: VNG6097C COG3472 # Protein_GI_number: 16120058 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Halobacterium sp. NRC-1 # 226 529 9 311 465 140 26.0 6e-33 MGTKMYLPKPSSQSYPSLLQEIEKGQIKIPQFQRNFVWSVSDSAKLMDSIIKGYPIGTFI FWRTKEQLRSVRNLGNITLPNSEDGEYVDYVLDGQQRLTSLLACLRGAIIKRDNKEDDFS KIYIDLTADYNQDIVITDVSKLDATNYISILDLLNADLVKLVSEYASHVGKIDKYRNSIK TYEFSIVQFKEAPIEIATEVFTRINTGGKSLTLFEIMVAKTFDEKQNFDLSEKFEKLLEE LSEVGYETISDASILQIMSLILQDECTRHDILKIPRQKFIDTWNDLVEAVKNAVDYFRSS YRIPVSQLLPYNALLVPFSYFFYKEPNAKPSKEQAKYLQDFFWRCALAERYSSAVESKLA QDIKRINKIIKNEKPNYDWDVDSSVKAIEENGWFSAGKSYIKAILCIYAYQQPKSFSNNA NINIGNDWLKQANSKNYHHFFPKSYLNKQGAEEFYINHILNITIVDDFLNKREIGAQKPS KYMKKFQQENDELDQTMKTHLIPDLEKFGIWDDDYDTFFEERAKLVSKEIKKRLLDK >gi|241319421|gb|ACQV01000024.1| GENE 73 68386 - 69243 1100 285 aa, chain - ## HITS:1 COG:NMA1464 KEGG:ns NR:ns ## COG: NMA1464 COG0354 # Protein_GI_number: 15794366 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Neisseria meningitidis Z2491 # 1 283 2 285 288 371 67.0 1e-102 MQTRLPFFGVVRVSGEDRASFLHGQLSNDINNLASGQACYATYNTPKGRVLANMLVVNRG EDLLLVMAQDLTEAIVKRLRMFVLRAKVVFELMPDLVVSGELADNAEPHPATEPQLSFPA QIQENAVEIALPHTGRLKISAAENAAEYQAGAENAWNLHEIRSGYPWICAATKEAAVAQM LNQHIIGAVHFRKGCYPGQEIIARAQYRGQVKRGLAVLSGDSLEAAGIAVKVGEEEAGVI LNTALTEQGSLSLAVIKFSAAEAALTDADGNALKQEELFFTVEKD >gi|241319421|gb|ACQV01000024.1| GENE 74 69366 - 69929 843 187 aa, chain - ## HITS:1 COG:NMA1469 KEGG:ns NR:ns ## COG: NMA1469 COG0652 # Protein_GI_number: 15794370 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Neisseria meningitidis Z2491 # 1 186 1 183 185 228 63.0 4e-60 MKKSIKLTLCALALSLSVQAQAVTHAVIETNMGNIQLELDEVKAPKTVANFVNYAKKGFY DNTIFHRVIDNFMIQGGGFTENMVQKPTDKAITNEAYNGLKNNIGTIAMARIGDPNSATS QFFINTADNDFLNFKSKTPQGYGYAVFGKVTSGMDVVRKISKVKTATRGFHQDVPTEAVI IRKVSIK >gi|241319421|gb|ACQV01000024.1| GENE 75 70127 - 72385 3040 752 aa, chain - ## HITS:1 COG:NMA1558 KEGG:ns NR:ns ## COG: NMA1558 COG1629 # Protein_GI_number: 15794451 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis Z2491 # 68 752 1 706 706 1160 86.0 0 MNSKLALMPLLIMSAFSYAADEATPETPVQQQLQEVNVRADAKRVKAARSYSIASDGDLR DRVNLGVLGKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGGESNTLTGL YFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMDPEGAVSGSVNIE TKKAADEGNRKIGLGWFSNNRAQGTFDLGQRFGENKEFGVRANGKLRHGDTPRHGYSEDN KEFALNADYRGEKLRVALDSIYAKRKTNGGRARMQDIQNADGRLFDAPDGKVNLLPSWNW QNTVGQTNMLTFEWDAFENAQITGGIGYNKARYYGTLISPTICGKKGASSQTATCSSADQ YHTGTARLTDQYFRTLSMNLSARGEFETGPVTHNWSTAFDRIIRQRATVRGSAAGKSRVE VDANGNIENQLASFVPNYATDWEGSANLDANIKVNSLALSDTLGFADNKYRLTLGGRFQA VEYTNKKEGQSGDSKRFSPMLMAAWVPQPDLVVYGNYMEDLEPADIKTDDSGETTMSKPR VSRQFEVGVRKNWGNFVTTLNAFQIKRPGYWRGSTTSKTDFAAYKAQGGAAGDEQGMERS RGIEFNTYANLLNNTLRPSLGLMYLQSTVKDYPNSRDMLVNGVQVANPRVIAKAGVEWDT PFVKGLTLNGNVSYFGKSYQDTQKQYAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFN KNYWQVQRGQYDRSFAVVGMPRTYWLKAELDF >gi|241319421|gb|ACQV01000024.1| GENE 76 72636 - 74402 2046 588 aa, chain + ## HITS:1 COG:HI1467 KEGG:ns NR:ns ## COG: HI1467 COG4178 # Protein_GI_number: 16273371 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Haemophilus influenzae # 4 583 3 583 589 592 50.0 1e-169 MQKWQIELYSTPSWLLQTLLMVAAASAVILFFARNTRFGREFSYILRLCLKPKSTIKVLL LITAMIALLLTEVRLNVLSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLVRAFNNVVND FLDQGLAIKWSERLNEVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFV RGMVNSVVTSLEFAVVLWGLAGILTVFGFDIPHGIVWFVYMFVILATFIAMWIGNPLIRY NYENEKLNGDYRYSLIRVRDHAESVAFYSGEKHEHDQLSDRFKAIIRNRWRIARQSVCLS GFNDMFTNGIKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYR ARLERLYGFLLSTEEKHTARQPDLTEVSDGLILENVALYRHNGEVLLDGININLKSGNSL LIRGPSGCGKTSLLRTLAGLWPFGSSGKVSHPPHQDILFLPQRPYTAQGSLRDAICYPDI DKQHPELAEAMNTCRLGYLVDKLDKTDDWQHKLSPGELQRVAFVRALLSQPKVILLDEAT AALDEPTEAMLYRALKHKLPDTIIISIGHRSTLNEFHDLCLDVGHVQC >gi|241319421|gb|ACQV01000024.1| GENE 77 74549 - 75274 733 241 aa, chain + ## HITS:1 COG:Z4858_1 KEGG:ns NR:ns ## COG: Z4858_1 COG0463 # Protein_GI_number: 15803996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 6 229 10 235 246 238 50.0 6e-63 MNTLALIPHYNHPTTISRVAQTMCGFGLNVLIVDDGSREECKPVLQALVSDGIDVLYRPI NGGKGAAVKTGLEYAEEHGYTHVLQVDADGQHCLSDTPKLLAAAEQNPEAVVCGWPQYGD DAPKARLYGRKITDFWNMLHTWSCDIKDGMCGFRLYPLAPALSVVREETVGDRMDFDTEI LIRLYWRDVKPVWIKTPVQYAADGVSHFDAFADNVRISKMHTRLFFGMLKHRLGKVFGKA V >gi|241319421|gb|ACQV01000024.1| GENE 78 75279 - 76208 790 309 aa, chain + ## HITS:1 COG:Z4858_2 KEGG:ns NR:ns ## COG: Z4858_2 COG4261 # Protein_GI_number: 15803996 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 8 304 3 303 312 166 32.0 4e-41 MTDNKQTHWVAQPERGSRLFLTLTTLMVRYLPAFFMRPCIWFVVLYFYATAPKPRRHVLR YQTRLQTTFPHIVLPKHSVFKQFVAFGEAVCDRFAVWQRKIRYEDLVIEDPDDIYSQIKR NERGQIFACSHLGNTEVCRALVSHHKNFRLNVLVHSKHAQAFNEALQKAGADHIRLIQVT DLDTTLMMELNSRIENGEWIAIAADRVPVRGEKTADINFLGHTASMPQGAWLLAALLKTQ VNTLFCVKQNGRYHLKLRRFTDTSSWKRGNREAAVKDAMQGFADILAQECAQNPLQWFNF YDFWGEDAV >gi|241319421|gb|ACQV01000024.1| GENE 79 76235 - 76672 550 145 aa, chain + ## HITS:1 COG:RSp0364 KEGG:ns NR:ns ## COG: RSp0364 COG0824 # Protein_GI_number: 17548585 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Ralstonia solanacearum # 10 138 12 140 144 125 45.0 2e-29 MKKHIYCQHSFETEVPFFDVDAMHIVWHGNYVKYLETARCAFLSSIGYDYNEMGRQGYSW PIVQMNLKYIRPARFGQKIRVDMDIVEIESCLRIDYTIYDAETNEKLTRASTTQAAVSLS DGLMQFQTPDSWLEAVKKHPTFKTV >gi|241319421|gb|ACQV01000024.1| GENE 80 76776 - 78155 1555 459 aa, chain + ## HITS:1 COG:NMB0812 KEGG:ns NR:ns ## COG: NMB0812 COG0534 # Protein_GI_number: 15676710 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Neisseria meningitidis MC58 # 1 459 1 459 459 715 86.0 0 MLLNLNRFAFPVFLKETRLLTALALPMLLAQVAQVGIGFVDTVMAGGAGKEDLAAVALGS SAFSTIYITFMGVMAALNPMIAQLYGAGKTEEVGKTGMQGIWFGLCLGVFGMLLMWAMIM PFRHWLTLSDYVEDTMAQYMFFTSLAMPAAMIHRALHAYASSLNRPRVIMLVSFAAFVLN VPLNYVFVYGKFGMPALGGAGCGVATAAVFWFSALALWLYIAKEKFFRPFGLTAKIGKPD LAAFKQIWKIGAPIGLSYFLEASAFSFIVFLVAPFGEDYVAAQQVVISLSGILYMVPQSV GSASTVRVGFSLGRREFLRARYISGVSLVLGWVLATCTALLLVIFRFQLAGMYTNDVAVL GIAATVLFFASLFQLADATQCIASYALRGYKVTKMPMFIHAAAFWGCGLLPGYLLAYHVD MGIYGFWTALTVSLTIAAIALIWCLELCSKEMIKSHKAV >gi|241319421|gb|ACQV01000024.1| GENE 81 78226 - 79266 980 346 aa, chain + ## HITS:1 COG:NMA1021 KEGG:ns NR:ns ## COG: NMA1021 COG0812 # Protein_GI_number: 15793977 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 346 1 346 346 642 88.0 0 MQPIQYQTDLTPYNTFGLKAQAQAFVALKHADELRDIVRLPEFNQDTVLWLGGGSNILLM EDYAGLIVHMENKGIREIERSDGLVYIEAQAGEIWHDFVLHTVELGLSGLENLSLIPGTV GASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVELSNTDCDFAYRESLFKQEGKGRYVIV SVVFALKEHFVPNLGYGDLAAAVAELSQGREATAKDVSDAVCAIRNSKLPNPNVLGNVGS FFKNPVVSAEKAADLLQQYPNMPCYPQPDGSIKLAAGWLIDQCRLKGHQIGGAAVHDRQA LVLVNKNKASAQDVHQLAQYVCNTVFTQFQVELHAEPNWLPTSYSL >gi|241319421|gb|ACQV01000024.1| GENE 82 79285 - 79926 1101 213 aa, chain + ## HITS:1 COG:NMB0810 KEGG:ns NR:ns ## COG: NMB0810 COG1309 # Protein_GI_number: 15676708 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis MC58 # 3 213 5 215 216 387 92.0 1e-108 MPRIAKVNTYTRIINASLALFNEEGERNISTNHIAAHLGISPGNLYYHFRNKDEIIVQLF KRYSEALLVYLNEAVLPSNVEDSINYMAGIYDVMWEYRFLFSDVNTLLARSAELLGEHNT FTQAKVSPLLVNLLTQLNGLNIINADQTAMNDLAVNMWMVTKYWFDFDSSLRGRAKLTED SKVRGISRTLSLLRPYLLPEHRAEFDQKIGSNH >gi|241319421|gb|ACQV01000024.1| GENE 83 80016 - 80789 653 257 aa, chain + ## HITS:1 COG:NMB0809 KEGG:ns NR:ns ## COG: NMB0809 COG0451 # Protein_GI_number: 15676707 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 4 257 7 265 265 369 68.0 1e-102 MHLPDISILGLSYLGLPLAQKFYEQGSQVAAIKRNLTSDDINLPIELDIIDLNQDDIFHD STLWQNHINKPTWFCLLPPSSLNHYADTLKKWIQLAEQSKVQHIIFTSSTSVYGDQARIC DETTSPDPQTESARQILAVEQALFESAVPHIDILRLGGLYSADRHPVTKLVQKTRIQGGN QPVNILHKDLAVQVLFQTACQANGKRIRNIVEPRHPSRAEFYTAEAAKLGLPAPDFIVDD KSNGKIVNTVCADGLSL >gi|241319421|gb|ACQV01000024.1| GENE 84 80840 - 81412 768 190 aa, chain + ## HITS:1 COG:NMA1018 KEGG:ns NR:ns ## COG: NMA1018 COG3165 # Protein_GI_number: 15793974 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 190 1 188 188 212 60.0 3e-55 MSALFPLINHLIQQNPEQQRELSEFAGSIICISLTGFRLTGRISEQGFLETANETADTNI TFHNSAIQKILQGGQPGVGDISLEGDLVLGMSVLPILGGLRYYPSDDLARVFGHVAAESI SSRAGDIGRTMKKIGKSIAEQISDFSREPESPVIDQATLAAWLEEVDKLRDDVARLNERL DRLERDIWID >gi|241319421|gb|ACQV01000024.1| GENE 85 81440 - 82330 1316 296 aa, chain + ## HITS:1 COG:NMA1017 KEGG:ns NR:ns ## COG: NMA1017 COG0061 # Protein_GI_number: 15793973 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Neisseria meningitidis Z2491 # 1 296 1 296 296 508 79.0 1e-144 MKSPFKNIGIVTRPNTPEIQDTVHTLVSFLRENGFTIYLDELSVEEHCVYIQDSAYCEIV NKAQLGKYCDLVVVLGGDGTFLSAAREVAPRAVPIIGINQGHLGFLTQISRDTMVEGIRP VLEGKYLPEERILIEASIIRDGETIERALALNDTVLSRGGAGQMIEFEVFINQEFVYTQR SDGLIISTPTGSTAYALAAGGPIMQAGLHAFTLVPICPQSMTNRPIAISDTSVIEILITK SGDARAHFDGQSHIDVQNFDRIIIRRYHNPLRVLHPTDYQYFKTLRQKLHWGEQLI >gi|241319421|gb|ACQV01000024.1| GENE 86 82355 - 82660 301 101 aa, chain + ## HITS:1 COG:no KEGG:NGK_0684 NR:ns ## KEGG: NGK_0684 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 7 101 6 100 100 129 64.0 2e-29 MKNISKTLIIALCALSSLSVSAHGMHKSKPLSFEELPKICQQYFTRADACYQKAGDKASF QRDNTKYLRQILPAADVGQRERMCQIAMDTFAEKTKNLSCE >gi|241319421|gb|ACQV01000024.1| GENE 87 82946 - 85390 2873 814 aa, chain + ## HITS:1 COG:PM1282 KEGG:ns NR:ns ## COG: PM1282 COG1629 # Protein_GI_number: 15603147 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pasteurella multocida # 53 814 49 778 778 320 29.0 7e-87 MLCAILAVFSGQSFAEELPQVDIPEVKVVGNAPSSNWRLQPGAKDYLRDGEVLTTNDLKT KRAVSLGQTVEQVSGVQNNAYGPNTGVPQIRSLSGSRVYVSENGLGISDAASISPDLPLM VNPFMAEKITVLKSSAAVLYGGNAIGGAVDVDTGVIATELPEKDLNGKVEVSSGYNTPRV AAFKLNGKVGNLAWHLSGADTHANDYRIPGDSKPAACYDHANIYSSRLMWACQVTPDITE TLNKGYYRYVAKDIPAFIEQWKRYNDGSEPDESELYKLNKPSWGDWVENPLYDGSPNFRN KVINAMKDDMPVEKGRLKNSHLSNQNFAFGLSHIGERSYAGVSVSRFLSKSGIAGFGYYN FAKSGDHHGGTRKAPVREYASVRAQQTRWQAEAMYRPLTPWIENIKFQAAYTQNPTSEYL GDTKMQTLDSKTFQSRLEFNHKADSWLKGTLGADWKQRSTESSGINGKRTGNYAYLPDTD SKEYGIFALENFKWKNWNASLGWRHGEVRHSVDIGDYKPGRNSSTVKGLEERGRLKYSLN HYHTGLGVDLFDFLKLGARYSRSQRAPEVNELYAGGDHYALMASESHWGADVLRPETAGT WEVNGEIGWKDGRFRASWYKTQFKDYTFLVDAAHDGGQRLPTKYWRSGDTQLHGVELEVN QWFDLNKYGTLEARLFGDFVHNRADLDDERNSTLGNGNRVRNNGYYMPNMPVSRYGAGLT WNKGNWQLGTSLTRYRPAKHTGHMAANYKEPVLGGYTIWDMYMSHTTKHGKSTAEWFLDA RNLANRTARPQNSMLKYIAPLPGRSVRAGIRLTF >gi|241319421|gb|ACQV01000024.1| GENE 88 85563 - 86864 1401 433 aa, chain - ## HITS:1 COG:PM1677 KEGG:ns NR:ns ## COG: PM1677 COG1253 # Protein_GI_number: 15603542 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Pasteurella multocida # 1 424 16 440 449 520 64.0 1e-147 MNIFEALLLLCLLIVISAFVSCSELALASARKIKLQVMAKDGGDTRALDVINMQQQPGSF ITVVQIGLNAVAILAGIVGEAAIRPYFGKLLENAGSWGSTVASLLTFSLVTGSFILIADL MPKRMAMTHPEAVAVRIVRPMMFLIFILKPLVWVFDGLANAIFKLFKISTVRQEQLTSED IYAVVDAGAQAGVLKEQEHYLIENIFDMQERTVTSTMSTREYIVYFDKHDDSDTVLEMMS EKPHNKFLVCDGDLERVIGYIESHTLLTLFLKEKDVRLTDKRVLRKALFIPDTLSLYDVL ETFKTSGEDFAVVVNEYALVVGVVTLKDVMSIVMGELVNTEEEPQIIRRTEDTWLVDGAT PLTDVMRALDIEEFPNSENYETIAGFMMYSLRKIPKRTDFLVYAGYKFEIIDTENLKIDQ LLVSKQGNMVGKI >gi|241319421|gb|ACQV01000024.1| GENE 89 86966 - 88273 1286 435 aa, chain - ## HITS:1 COG:NMB1258 KEGG:ns NR:ns ## COG: NMB1258 COG2256 # Protein_GI_number: 15677127 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Neisseria meningitidis MC58 # 1 433 1 433 436 796 95.0 0 MSDLFARQPDAPLAERLRPHSLDDVIGQQHLIGEGKPLRVAVEGGKPHSMLLWGPPGVGK TTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQGRTTILFVDEVHRFNKAQQ DAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQSLSSDDLKKLIAKVLALPEY QEFTIDVDAQELLVNTADGDARRLLNLIEQLLRAADTRRLKTLTAEFLADSLGAQIRRFD KGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARRIVRMAWEDIGLADPR ALTIANDAATTYERLGSPEGELALAQAVLYLAAAAKSNAGYKAYNQMRRFVKENASDEVP VHLRNAPTKLMKELGYGREYRYAHDEPNAYAAGESYMPDGLDEPDFYQPVPRGLEIKIGE KLKWLKSLDEEALDD >gi|241319421|gb|ACQV01000024.1| GENE 90 88425 - 88799 433 124 aa, chain + ## HITS:1 COG:no KEGG:NGK_1216 NR:ns ## KEGG: NGK_1216 # Name: not_defined # Def: lipoprotein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 7 124 5 122 122 150 65.0 1e-35 MTSKTLLAAITSVFLLGACATGGESFGGLGSGTGIGSSVVKMAVDSQCRTELNKRNEWRV IALAMSAEKQAEWENKICGCASEEAPNQLTATEMMQVLSPATREQAIASVTAKTVTACFK RLYK >gi|241319421|gb|ACQV01000024.1| GENE 91 88886 - 90295 2179 469 aa, chain + ## HITS:1 COG:NMB1046 KEGG:ns NR:ns ## COG: NMB1046 COG0498 # Protein_GI_number: 15676932 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Neisseria meningitidis MC58 # 1 469 1 469 469 834 85.0 0 MKYISTRGATARKQFSEVLLMGLAPDGGLMLPEQYPQIDCATLDQWRTLSYPELAFEVMS LFATDIPADDLRDIINLTYTEKVFGTQAITPVRTLSDGIKIQALSNGPTLAFKDMAMQFL GNAFEYVLNKEGKELNILGATSGDTGSAAEYALRGKKGVNVFMLSPEGKMSAFQRAQMFS LQDANIHNIAVEGMFDDCQDIVKAVQNDAEFKAKYHIGTVNSINWGRIVAQVVYYFAGYF NATSSNDEKVSFCVPSGNFGNVCAGHIARQMGLPIHRLIVATNENDVLDEFFKTGAYRPR NSEHTHVTSSPSMDISKASNFERFVFDLMDRDADEIKTLWAEVGSGKGFNLEFVLNKVHQ QYGFVSGKSTHANRLATIKQIYEQDCELIDPHTADGIKVAREVREAGETIVCLETALAAK FEATIHEAVGEVSIPRPAALEGLENLPQRVRVVPNNATTVKDIIKEALA >gi|241319421|gb|ACQV01000024.1| GENE 92 90599 - 92290 246 563 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 334 542 17 228 245 99 33 1e-19 MFIVSVVAMLIVAGTMPAFGYLLKPLINEGFVDKNMKSMSWLPLAIVALFFVRGLFNFIN EYCTTYLSSHLVQRLRGEMFNKMMHLPTSYFSSNTGGRLMSRILNDVNQITDAGFNVITV IAKDGVSVVGLLGLLTYLNWRLTLITFIILPVVAVCIQTVSKRLRKLSANNQIYIGQLMQ VLGESINGERVVKIYGGQDYENRRFNRIADDVRRNLLKQVSASSAGTGITQLMASVALAA IIYAAARQAGLSGFSAGDFMSFLSSMIMMFDPIKRMTGVMQSLQRGLAAAESVFTFLDQP EESNEGKQILSPNPGDIEFCDVVHRYPEAERNSLNHINLLVPQGKVTALVGASGCGKTTL ANMLPRFLNPDEGKVLIGGINIKEYTLESLRSRMAFVGQNVILFNGTIAENIAYAQADKF SEEEIINAAKAANAWEFIQKMPQGLHTEVGENGLKLSGGQRQRLAIARALLKNAPILILD EATSALDNESERLVQTALENLMQNRTTLVIAHRLSTIEKADNIVVMHEGNVVEQGTHHEL INAGGRYSNLHSLSEKSAKPASK >gi|241319421|gb|ACQV01000024.1| GENE 93 92376 - 93152 1232 258 aa, chain + ## HITS:1 COG:NMA1442 KEGG:ns NR:ns ## COG: NMA1442 COG1018 # Protein_GI_number: 15794347 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 520 96.0 1e-148 MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMVDGKPLMRAYSVASANW EEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAGDLNPGKHLYLLSTGTGIA PFLSITKDPDVYEQFEKIILVHGVRYKKDLAYYDRFTKELPEHEYLGDLVKEKLIYYPIV SREEYVHQGRLTDLMRSGKLFEDIGLPKINPQNDRAMLCGSPAMLKDTCNVLDEFGLTVS PKTGVRGDYLIERAFVDQ >gi|241319421|gb|ACQV01000024.1| GENE 94 93224 - 95347 1921 707 aa, chain + ## HITS:1 COG:NMB0778 KEGG:ns NR:ns ## COG: NMB0778 COG2959 # Protein_GI_number: 15676676 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis MC58 # 269 707 2 424 424 500 64.0 1e-141 MPTLLIIRPSNRPQQDIQTCHTAGWQAQVLSPIEIEVDRSAQKKLPEQFKQADVVFWVSP TAIETAAPHLNFSDGHKAHITVGQTSQHTLAQFSPYPVFSPEDGNDSEAVLRMPIWKNLP PNARVLIIRGHGGRDFLADKLTELGFQIDIAEIYFRRPHAIDWQNFKTEDIAAAYVTSGE LAREFFHQIPPQFSRFFESLLYFTHHPRIADALRIVGAKHVETVTSLSAALSSMPQRSQA VNPVEDNKDTQQVANTAAPVPERSENTRPSEQIKPTQPQRVEASMPESNNLPQNNAPVII KQSGGKALAAGATVLALLGLGASGFLFVQGQNVLKNQELEFNQKIDKAALGESENASLLK DNLNRQTAIQAELDRLNNGQKNNSDQILQLQKAYQELFKGRINWLVDEAESMLNTASQQL MLSGNLQGAVSVLEHIDSRLSRFEQPELIPIKQAISNDLAALKNRPYVDISATALRLDRL ESGISGLPLVLDGVLKPGAAPVEAANSGTWWENTWEKSLNALKGLVEVRHLDSNDAMLIS PDQTYFIRENLRLRLLDARIALLQHNGEVYQSDLNNVEATVKQYFDSKSPATQSWLKELA ELKALDVRMISDDSLKASLSAVRAFQEGSRIQMTTEEAAQTQAAEKTASAPAATIEQTTT SAPAAASAPQSLEAPALPSENKKEPAAEAAKPQNQTKPAAKIKGEQA >gi|241319421|gb|ACQV01000024.1| GENE 95 95344 - 96567 1799 407 aa, chain + ## HITS:1 COG:NMA0990 KEGG:ns NR:ns ## COG: NMA0990 COG3071 # Protein_GI_number: 15793947 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Neisseria meningitidis Z2491 # 1 402 1 402 405 571 77.0 1e-162 MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFLIK FVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEATKVLQNKEAGDNR TLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALSRRDYPTAAQNLE AAAKINSNLSRLVRLQLRYAFDHGDAADVLAKAEKLVKAGAINDYEAEQYQNWAYRRLLS EATDAGSLKACLKHIPESIKSGELCVAIAEKYERLGLYADAVKWVKTYYPQTRQPELLEA FVESVRFLSEREQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKAQGYLEASIAL QPSVSAHLVLARVFDETDQPQKAQEQRNLVLESVAEEEHPAALPQPN >gi|241319421|gb|ACQV01000024.1| GENE 96 96703 - 97764 1740 353 aa, chain + ## HITS:1 COG:NMA0991 KEGG:ns NR:ns ## COG: NMA0991 COG0407 # Protein_GI_number: 15793948 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 352 1 352 354 712 97.0 0 MTALKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVT IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERTLQHEVDIAKLQVPDMEKL QYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKI LDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGR RVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFGTP ESIRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHELSRQYHR >gi|241319421|gb|ACQV01000024.1| GENE 97 97910 - 99403 1395 497 aa, chain + ## HITS:1 COG:YPO2188 KEGG:ns NR:ns ## COG: YPO2188 COG1502 # Protein_GI_number: 16122418 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Yersinia pestis # 3 497 4 486 486 357 37.0 4e-98 MNFLKDITWTEIFIFAHTCAALVCMLRVLYKQKNIGSTFAWLIILFLFPVFGTIAYILIG EPRLGIARAKRTGEMNRFYSNFAATHLADIYLDIAGQVKSRYHGISKVAEKGTGLGATKG NAMSLLSTTDAIIDSMLADIRAATHSCLLAFYIIEPKGRIEEILNEILIAVDRGVDCAIL ADAVGSRSFFESDWVEILCQAGVEVHTSLPVGIWRTLFTRTDLRNHRKILVIDSKIGYTG SFNLVDPRYFKQNSGVGEWVDVMMRCTGPMVLELSAVFFADLAVETDENLQNVQTYLNQA QSLLPQILPEKMQQGDIVAQIIPSAPEQGSFVIYETIISAIYAATKQITITTPYFVPDEP LLMALTVAAKRGVKVTLILPAKVDSLMVRYASRAYYPMLLEAGVKIAMFEGGLLHAKTMT IDEDYSLFGTVNMDMRSFFLNLEISLAIYDRDTTKQICHLQRNYLKNSSYIAIKSWQQRS KLRGLVENAVRLMSPLL >gi|241319421|gb|ACQV01000024.1| GENE 98 99667 - 99861 436 64 aa, chain + ## HITS:1 COG:no KEGG:Bpet3250 NR:ns ## KEGG: Bpet3250 # Name: not_defined # Def: putative transmembrane protein # Organism: B.petrii # Pathway: not_defined # 1 64 1 64 67 70 60.0 2e-11 MKRNLGTLDRVIRIVIGVALIAAAATGQIGWWGWLGIIPLGTALIGNCALYSLLGINTCR INKK >gi|241319421|gb|ACQV01000024.1| GENE 99 99874 - 100395 421 173 aa, chain + ## HITS:1 COG:PM1480 KEGG:ns NR:ns ## COG: PM1480 COG0607 # Protein_GI_number: 15603345 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pasteurella multocida # 18 172 14 172 174 142 51.0 3e-34 MSTVGQLPQIKPSEAMAKIREGALAVDIRSQAEYRGGHIGGALSLPPEQQQDKLPDDTAP CLIFYCLSGKRTTRAETILSALGQGRECYILEGGLLAWKAAGLPIVADRAAPDIIRQVQT IAGSLILLGVLAGWLVSPWFYLIDVMVGAGLLTAGLTGFCGMARLLAKMPWNH >gi|241319421|gb|ACQV01000024.1| GENE 100 100475 - 100777 284 100 aa, chain + ## HITS:1 COG:PM1481 KEGG:ns NR:ns ## COG: PM1481 COG0640 # Protein_GI_number: 15603346 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pasteurella multocida # 11 96 9 94 95 103 58.0 8e-23 MTIADNQPPYEEATAFLKLLANPNRLAVLCKLHERPHNVTELAESSGLPQAAMSSQLALL REAGLVSFEVNHRERQYYIADPRVTEMIQLLYSFFCAEKP >gi|241319421|gb|ACQV01000024.1| GENE 101 100868 - 101206 336 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760057|ref|ZP_04758155.1| ## NR: gi|241760057|ref|ZP_04758155.1| putative lipoprotein [Neisseria flavescens SK114] # 1 112 1 112 112 203 100.0 3e-51 MKMRVMMLGVTGLILSGCFFTDEIKLEDIQNFKITVNEAKGNRQVYLTGLLGSSAMGISD IKTTSRNEELNITLFQKLAGLEYSGTLDKEIALESNIKKITYGSKHEIIWQD >gi|241319421|gb|ACQV01000024.1| GENE 102 101282 - 104686 4253 1134 aa, chain - ## HITS:1 COG:NMB1281 KEGG:ns NR:ns ## COG: NMB1281 COG1197 # Protein_GI_number: 15677148 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Neisseria meningitidis MC58 # 428 1134 672 1379 1379 1343 97.0 0 MTYPIPKPREKSRWLNLSQGSLPLALARYLPHKQLKVVLTQDAEQALRLQTAWRFFRPHD TAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLFVPVATAMQKLPPVPFLAG RTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSEMPYRIDLF DDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVY KAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDALFVSLGDVHAEANRFWSDVKSRYAM AQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLPDVSGKEHTLPDLAVNRQSDEPLQALK DFQTVFDGRILLCAESLGRRETMLGFLQQNGLKAKSVPDWQGFLSAHEPLMITVAPLAYG FKLEDQNIAVITESDLYQYVARSRKHHRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGR YMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENVALHKLGSGAWNK AKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAV IKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADR FADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDEEH RFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKP FSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQ VMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYS YLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTL YTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCE TVQQINAIHEELVDRFGLPEQPVKTLIESHYIRLVAKELGIDAIDATSEAVTVTFGKNNN VDPTEIILLIQSDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLKDRVMVK >gi|241319421|gb|ACQV01000024.1| GENE 103 104819 - 105553 580 244 aa, chain - ## HITS:1 COG:CC0717 KEGG:ns NR:ns ## COG: CC0717 COG1814 # Protein_GI_number: 16124970 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Caulobacter vibrioides # 19 244 7 233 233 184 55.0 1e-46 MLSSSGNSQFIGVYMYSYHSERHFSERNNWLRASVLGANDGLISTASLLTGVAAAAPDFQ TLLLTGVSALIGGAVSMAAGEYVSVSSQSDTEKADLHKERYELANNPDAELEELTEIYRR RGLADPLAAAVAKALMEHDALAAHARDEIGITEISTAQPMQAALASAASFCAGAILPLLV ALTASTTIVPALAVSTLYGLAGLGYVSAKLGGAPVVPAVLRVCLWGVAALVITGFIGKLA GVAV >gi|241319421|gb|ACQV01000024.1| GENE 104 105810 - 105956 302 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEENKIKVNDLPEDKKEQTEETELPVINNEEKRGGHSEGGCCGACGG >gi|241319421|gb|ACQV01000024.1| GENE 105 106147 - 106347 428 66 aa, chain + ## HITS:1 COG:no KEGG:NMO_0909 NR:ns ## KEGG: NMO_0909 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 52 1 52 60 88 75.0 8e-17 MFWYIVGFFAIIVSLLALWVNASAFGMQEDGTPQSEYEKMLGLGAKLKDKDTVAKEREAA RFHPDD >gi|241319421|gb|ACQV01000024.1| GENE 106 106437 - 107834 2209 465 aa, chain + ## HITS:1 COG:NMB1029 KEGG:ns NR:ns ## COG: NMB1029 COG1027 # Protein_GI_number: 15676916 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Neisseria meningitidis MC58 # 1 465 1 465 465 896 96.0 0 MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQFVRSMVMVKKATAQAN GALGAIKPEIAAAIEKACDEVLVKGRCLDQFPSDVYQGGAGTSVNMNTNEVIANLALEVL GHEKGHYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGELLDKLTILKNAFAAKAEEFK DVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDRTRSLLLEVNLGATAIGTGVNTP KGYAALVVEKLSEVSGLPCKLTENLIEATSDCGAYVMVHGALKRTAVKLSKICNDLRLLS SGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVVNQVCFKVIGNDTTITFAAEAGQLQLN VMEPVIAQCMFETISLLGNAAVNLSDKCVKGITVNSEICEHYVFNSIGLVTYLNPYIGHR NGDLVGKICAQTGKGVREVVLERGLLSEEELNRILSPENLMNPHL >gi|241319421|gb|ACQV01000024.1| GENE 107 108089 - 108751 994 220 aa, chain + ## HITS:1 COG:HI1278 KEGG:ns NR:ns ## COG: HI1278 COG0778 # Protein_GI_number: 16273193 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Haemophilus influenzae # 1 219 1 219 220 330 71.0 1e-90 MNQITREQMLQVFENRCSTRYYDPNKKISQEDFAAILEFARLSPSSVGSEPWKFLVIQNK ALREKIKPFSWGMQFQLDDCSHLVIILAKKNARYDTPFFRSVAERRGLQGEQLEKALAKY KSFQETDIKIADDQRALFDWSGKQTYIALANMLTGAAAIGIDSCPIEGFNYDKMNEVLAA EGLFDANEWGVSVAATFGYRAKEITKKSRKPIEEMVTWVE >gi|241319421|gb|ACQV01000024.1| GENE 108 108932 - 111133 2816 733 aa, chain - ## HITS:1 COG:PA0931 KEGG:ns NR:ns ## COG: PA0931 COG4771 # Protein_GI_number: 15596128 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 24 733 41 742 742 687 51.0 0 MKTFTLAILPLALISAFSHAAEEKAIEQAEVDTVYVTAEKQLQQSLGVSRISKDDIDKRP VANDISEFVRTMPGVNLTGNTATGQRGNKRQIDLRGMGPENTLILIDGKPVNSRQSERIS MRGERNTRGDSNWVPVEEIESITVLRGPAATRYGSGAMGGVVNIVTKKVSKEFKGQVNLY ANQPQDSKEGATRRIGFNLSAPIIQDTLGFRIYGNLNKTDADAADINAGHGNDSAAGVEG VRNKDIAGRLQWKISPAQTLILDSSYSRQGNIYNGDTQNSNPRSALVNSLADSKAETARL YRSAYSLTHDGAWEWGDTKNVISYERTINSHLPEGLAGGPEGSYTGLDFVQSRLKNLRFS SEANIPFKLGVDNVLTVGAEFTDSKLDDPASNTQGFKDQGKTDAFNGISATRGGKASQRN WAAYVEDNISLTDKTHLIPAIRFDHNSDSGSNWSPALNFSHQIGENWLVKGGVARAYKAP NLYQTNPDFILYTRGQGCPLNAPNSVRCYYMGNGNLKPETSINKEIGLEFNKNGWQASAT YFHNAYRNKIVIGDQLIATSNIGNWLLQWENTPKATISGIEGNLVIPLHDTLKWSNNFTY MHKSEDYQGNPLSLVPKHTINSTLSWTPNERFDANLTFTHYGRTKPRGVAINRLERDGNP RAGVAALSSEHSQTQVSSYGIWGINAGYNWNKRVAVRGGISNLFDKKLYRTTAGAQTYNE HGRAFYGSLKVSF >gi|241319421|gb|ACQV01000024.1| GENE 109 111365 - 111583 552 72 aa, chain - ## HITS:1 COG:NMA1258 KEGG:ns NR:ns ## COG: NMA1258 COG2841 # Protein_GI_number: 15794191 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 72 1 72 72 98 91.0 4e-21 MFPEYRDLISKLKQEDAHFARLFDEHNELDDKITGLVNNPVTSGAEEIEELKKAKLKLKD ELYALLQKAAGK >gi|241319421|gb|ACQV01000024.1| GENE 110 111855 - 112178 278 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760156|ref|ZP_04758254.1| ## NR: gi|241760156|ref|ZP_04758254.1| hypothetical protein NEIFL0001_1299 [Neisseria flavescens SK114] # 1 107 1 107 107 184 100.0 1e-45 MDGQFILLENHPSWMPVNDADFNHAAPLPDGLAVHEESFYPFEKINAESADNIKIFSEEA LRLEKERLNAVALVELAKNLKAAQAEADLATLLEKMDFHLKQDDIFK >gi|241319421|gb|ACQV01000024.1| GENE 111 112312 - 113562 2056 416 aa, chain + ## HITS:1 COG:NMB1055 KEGG:ns NR:ns ## COG: NMB1055 COG0112 # Protein_GI_number: 15676940 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Neisseria meningitidis MC58 # 1 416 1 416 416 807 98.0 0 MFSKSVTLAQYDPDLAAAIAQEDKRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP GKRYYGGCEYVDIVEQLAIDRVKELFGAAYANVQPHSGSQANQAVYASVLKPGDTILGMS LAHGGHLTHGASVNISGKLYNAITYGLDENEVLDYAEVERLALEHKPKMIVAGASAYALQ IDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVPFCDFVTTTTHKTLRGPRGGVIL CRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKEALQPEFKQYAKQVKINAAAMAEEL VKRGLRIVSGRTESHVFLVDLQPMKITGKTAEAALGKAHITVNKNAIPNDPEKPFVTSGI RIGSAAMTTRGFNEADARVLANLVADVLANPEDEANLAKVREQVTALCNKYPVYGA >gi|241319421|gb|ACQV01000024.1| GENE 112 113956 - 114870 800 304 aa, chain - ## HITS:1 COG:RSc2109 KEGG:ns NR:ns ## COG: RSc2109 COG0697 # Protein_GI_number: 17546828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 10 302 3 295 316 274 49.0 2e-73 MIHFLSQNISSKQATAIGLLAVALWSFVISLIRSLSLHMGAVGGAAMMYTLSTVLIWLIF GRPHLRNYNRSYLFWASVFFVGCELCLSLSVGFAQNARQAVEIGMVNYLWPTFTIVGVVY FNKQPSKWWIVIGFVLSFFGIATVLGGDVGLSVSGIYHNVRTNPGGYIMAFVDAVLWAAY CTLTARVKAEGSSVGFFFALVSILLWIEYFLSGANTLNFDAVSLGYAVAAAACMGLGYAV WNIGISRGNLTVLAGASYFIPVLSAVVSSFVISAPLSMTFWQGAGMVCLGSIVCWLATRG KQMA >gi|241319421|gb|ACQV01000024.1| GENE 113 114966 - 115478 587 170 aa, chain + ## HITS:1 COG:NMB1585 KEGG:ns NR:ns ## COG: NMB1585 COG1846 # Protein_GI_number: 15677435 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis MC58 # 30 168 1 139 143 193 69.0 1e-49 MIVSDGLLFAISPKHDYNPHPISQYRDQFMNQLDQLGMRISHIDSAFDQWIKQQNTNYNT FAVLYTLATEGSRTQKYIGEEWSLPKQTVSGTCKTLAEQGLLTFHESEQDKRERLLSLTE QGKESAAPLVQNMQEFSKRIFTAFGEKRAARLFADLDALAELMAQTLNTK >gi|241319421|gb|ACQV01000024.1| GENE 114 115490 - 116359 1009 289 aa, chain + ## HITS:1 COG:no KEGG:NGO1245 NR:ns ## KEGG: NGO1245 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 283 1 283 288 465 82.0 1e-129 MWKMLKHIGQTHRRKLITTFSLVGLDNLLLLVYPVFGGWAINAVMEGNVWQAMLYGVVVL LMWIIGAARRAADTRTFTQIYTEIAVPVVLEQRKREVPHSAITARVALSREFVSFFEEHL PIAATSLVSIFGACMMLLILEFWVGVLAVAILALFLWLLPRFAAISENLYFRLNNRLERD NHLIRDGNEHQLYRHYGWVAKLRVLISNREALGYLSIGMAMSVLFGFAFIHMTLKGYGSA GHIYFVSTYLWMFAMSLDDVPRLVEQYSNLKDIGQRVELSEENNLSKAV >gi|241319421|gb|ACQV01000024.1| GENE 115 116387 - 116710 363 107 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 154 155 75 41.0 2e-14 MSWFYLILAGMMEIGWPLGLKLAQQEGYRWHGFAAALACIVGSGYLLYLAQKSIPMGTAY AVWTGIGAAGAFLVGVVFFNDAANFGRWLGAFLIISGVVVMKLSSGN >gi|241319421|gb|ACQV01000024.1| GENE 116 117236 - 117742 773 168 aa, chain + ## HITS:1 COG:no KEGG:NGK_1264 NR:ns ## KEGG: NGK_1264 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 168 1 166 166 156 54.0 2e-37 MTASTKIHSQTQMLHTCRMVVDSNSHHSMLNMHTLPDSPDSLISEALIPQVRTIATLIAA ERHDFNQSSPNVFTDEADFFAARILVLGVRRFHLDITLLPMLKTANKRAEAFAKRHHMPF SPAEMQMSLHTRRPANLLIIETEHEMPALGNLAANSRAFAAQLSNIIL >gi|241319421|gb|ACQV01000024.1| GENE 117 117833 - 118420 739 195 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1281 NR:ns ## KEGG: NMCC_1281 # Name: not_defined # Def: membrane lipoprotein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 195 22 205 205 209 76.0 6e-53 MKKLIALAALSTFALAACKDNTQAQLEQQQKQIEALQQQLAQQNGQQEDNTVYQLTPKAV KDTIPAEAQANGNNGQPVTGTDGQQYIYDQSTGSWLLQSLVGAAAGAFIGNALANKFTQA RNQNSPIARQARANYYQTARPNGRTSQQLNTRTLRAQQQNAQQQNAQQQQRYRETARQPS NYRRPSMGRGFGRRR >gi|241319421|gb|ACQV01000024.1| GENE 118 118548 - 118784 283 78 aa, chain - ## HITS:1 COG:NMB1151 KEGG:ns NR:ns ## COG: NMB1151 COG0155 # Protein_GI_number: 15677027 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Neisseria meningitidis MC58 # 1 77 502 578 589 110 66.0 6e-25 MVGKAIGLYNLYAGGNREGTRIPRLFKENITEPEILEIVEGWVADWSQNRLDDEGFGDFA IRTGIVKPVLDAPRDFWA >gi|241319421|gb|ACQV01000024.1| GENE 119 118943 - 119476 912 177 aa, chain - ## HITS:1 COG:NMB0641 KEGG:ns NR:ns ## COG: NMB0641 COG0221 # Protein_GI_number: 15676541 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Neisseria meningitidis MC58 # 1 177 1 177 177 341 97.0 4e-94 MADFNKILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLDRVEPAIFAKPTNYGFI PQTLDEDGDELDVLLVTEQPLATGIFLEARVIGVMKFVDDGEVDDKIVCVPADDRNNGNA YKTLADLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDVEEAKQVIKESIERWNKQA >gi|241319421|gb|ACQV01000024.1| GENE 120 119561 - 120025 505 154 aa, chain - ## HITS:1 COG:NMB0642 KEGG:ns NR:ns ## COG: NMB0642 COG0494 # Protein_GI_number: 15676542 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 3 151 4 152 152 240 79.0 8e-64 MSGKPLKYPVSALVVLHDKDGNILLIERTAPQGFWQSVTGSLEEGERIEETAWREVWEET GIRLADGQLENWHDSTVYEIYHHWRHRYPKGVFENREHIFSAQIPRDTPIMLQPDEHVAY GWFSAEEAAEKVFSPSNKRAILELVKRLNAKKAV >gi|241319421|gb|ACQV01000024.1| GENE 121 120163 - 120816 648 217 aa, chain - ## HITS:1 COG:SMb20398 KEGG:ns NR:ns ## COG: SMb20398 COG4186 # Protein_GI_number: 16264132 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Sinorhizobium meliloti # 4 169 2 149 164 88 37.0 1e-17 MSKIFFTSDLHFSHKNIAKFCPQFRPFDNIADMDEYLIETWNNTVSPDDDVYNLGDLSFA HDIKKIAAVLSRLNGKHHLIYGNHDDIIRRHNKYLFETVKHDGHPLLSSARTYRKLELDE IDNTLILFHYPINEWDGCHRGWYHLYGHLHDRVAAIKGRALNVGFDLHGRFLTAQDVDKF LCDLPKISYFGEVGLKANSPEEAAELVSWKLAQLNQV >gi|241319421|gb|ACQV01000024.1| GENE 122 120936 - 121376 478 146 aa, chain + ## HITS:1 COG:BS_ywlF KEGG:ns NR:ns ## COG: BS_ywlF COG0698 # Protein_GI_number: 16080745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Bacillus subtilis # 1 144 1 145 149 92 34.0 3e-19 MRLVIAAPANGAILKDALKAHLQNDPRVGSLVDLSSPKGTYPQLSFAAAQEVAAGRADRA LLICGTGVGTAIAANKVRGIRAATAHDLLTVRGSVENYDAQVLCMGQNVIAAPAAWALVD IWLDLRHDTSSGYAPKVGEIEAFERG >gi|241319421|gb|ACQV01000024.1| GENE 123 121453 - 122013 655 186 aa, chain - ## HITS:1 COG:no KEGG:RPE_3533 NR:ns ## KEGG: RPE_3533 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris_BisA53 # Pathway: not_defined # 11 186 8 182 182 109 36.0 5e-23 MKKTNIVKSLMLMAALLPLTAQAAQNTELSSFGKPPKGFKVGYQTEQNGMMMIELVPQKQ TVDNWTQMVTLQTMQGANPGIADFRNAVFAGWQNACPKSSTLTVREGEENGYPFALWQLI CESNPQTGKPEYTWMKAVQGENAFYVKQYAFRYAPNKAEVGNAMGHLRDLAVCDNSAKHP CGKSGK >gi|241319421|gb|ACQV01000024.1| GENE 124 122097 - 123575 1716 492 aa, chain - ## HITS:1 COG:no KEGG:PM0531 NR:ns ## KEGG: PM0531 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 1 173 1 172 179 120 38.0 1e-25 MQKFILIRGHQGSGKSTFAEQKAAEFKAQYPDAEVVHIENDLFITDEYGEYRWSGEAVDK AQKRGNALMTETLRLGRQNPNRNILIINSNTNQKASRCRHLLDQVEKSGFETEVYRLHNF YPNLHGVKEHDVLAAYIKLNQNRVANEIHIEAVQPANAEQLEKIEQMQAIEHKPLVFDEA QQTFVTDHYLQHGSRNFTAKASKRYPELRVLKYARSVFYDNRFDDALLEMRGLIIDAHNR IIVRPFKKVFNYSERIAKGSRYPIRVGDERLVDAVVKVNGFLGCCTFVSLSDDHPSHGAA FDGKVLYSTTGSLDSAFADMTVAHCAQYETLFRAYPNHTFLFEITDAKDVHIIREELGET LIGCIDVATGRQFTEAELDEIGKQYGVRRPETLKNITFRELKGRLKNVEHEGFMVFDAQN GEMLFKLKSPYYLISKFLGRSNEGNIGRKLDKRHVDEEFYPLIDHIHDHREAFNAMPELD KIEFVQAFLRQL >gi|241319421|gb|ACQV01000024.1| GENE 125 123664 - 125220 1650 518 aa, chain - ## HITS:1 COG:no KEGG:Pfl01_1945 NR:ns ## KEGG: Pfl01_1945 # Name: not_defined # Def: TROVE # Organism: P.fluorescens_PfO1 # Pathway: not_defined # 1 511 1 513 515 545 55.0 1e-153 MANTTLFQSIKNRFTKTDTHNEAGGIAYTLTPKQQLAQLAATGCLNNTYYADAQSQLDQV LKLAESLDAEFISKTAVYARQKGFMKDMPALLLAVLAQKDVNMLARVFDQVADNGKMLRN FAQIIRSGAVGRKSFGNRPKKLMQTWLLTATEKQLLNAAIGNSPSLADVVKMVHPKPREA WRAAWFAWLIGKPYDHEALPPITRAFEDYKQSREGALPNVPFQMLTALDLNSGDWAQIAR NGSWQQVRQNLNTFLRHEVFAKSKNIKMVAEKLRDETTIARARVLPYQLLTAYQATSEQM PFEIHEALQDAMETAVQNVPAIQGKVVVCPDVSGSMHSPATGYRGSATTKTRCIDIAAAM LRTNPQARVIPFEQITVNVKLNPRDSIMTNAEKLANIGGGGTACSAPLAMLNREKADVDL VVIVSDNESWADDSQRWGATTSLMKEWNILKRRCPEAKLVCLDIQPYTKAQARNRQDILN IGGFSDQVFSLIGSFAERGMGTDFWVEEIEKTPLAAVN >gi|241319421|gb|ACQV01000024.1| GENE 126 126345 - 127973 1809 542 aa, chain + ## HITS:1 COG:STM3522 KEGG:ns NR:ns ## COG: STM3522 COG4650 # Protein_GI_number: 16766809 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 6 539 2 522 527 590 57.0 1e-168 MNTTPKKQVAISFLGTVLDKGFGQGRWLKWRPNVAMNQRQDFHLDRMELFYAEKYRELAD HVKADIQQVSPHTVVNLVPMELANPWDFSEVYTKLHDWAASYPFDTEEETYLTHITTGTH VAQICLFLLVESRQIPGVLLQTAPPKNQRRSMEDGNVGSYEIIDLDLARYDVLAERLAAV RDDAVRYLKSGISTQNTAFNRMIAEIEQVALNSPSPILLSGPTGAGKSMLARRIFELKKA RHLIKGTFVDVNCATLRGDGAASALFGHKKGAFTGAAEKREGYLKTADGGVLFLDEIGEL GLDEQAMLLKAIEEKHFYPVGSDSEVKSDFQLIAGTNRDLRHEIRAGRFREDLFARINIW NYPLPALANRREDIEPNVEHQLALASQELGRTTRFNKEALAAYLDFAHSNQAPWRGNFRD LAASIMRLATLAPQGRIQVEQVQAEIERLKWLWSEEPFSDGLLHKRPSEKTQDYPDKIDW DTLDLFDKLQLQHVIDECRKHPNMAAAGRALFNVSRTERAKVNDSDRLRKYLQRFGLEWG DI >gi|241319421|gb|ACQV01000024.1| GENE 127 128164 - 128991 440 275 aa, chain - ## HITS:1 COG:NMB1305 KEGG:ns NR:ns ## COG: NMB1305 COG0627 # Protein_GI_number: 15677171 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Neisseria meningitidis MC58 # 1 275 1 275 275 542 95.0 1e-154 MKLIKQHQIFGGLQQVWAHHAQTLQCEMKFAVYLPDNQENRPLGVIYWLSGLTCTEQNFI TKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQGAGFYLNATEQPWATNYQMYDY ILNELPSLIEEKFPTNGKRSIMGHSMGGHGALVLALRNRERYQSVSAFSPILSPSLVPWG EKAFSAYLGKDREKWQQYDANALIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA NQPADVRFHKGYDHSYYFIASFIGEHIAYHAAFLK >gi|241319421|gb|ACQV01000024.1| GENE 128 129000 - 130136 746 378 aa, chain - ## HITS:1 COG:NMA1518 KEGG:ns NR:ns ## COG: NMA1518 COG1062 # Protein_GI_number: 15794412 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Neisseria meningitidis Z2491 # 1 378 1 378 378 730 97.0 0 MENKQTNSTIKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSD PEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRE TQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGV TTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKHFG ATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAG AGQEISTRPFQLVTGRVWKGTAFGGVKGRSELPKMVEDSMKGDIELEPFVTHTMTLDQIN EAFDLMHEGKSIRAVIHY >gi|241319421|gb|ACQV01000024.1| GENE 129 131570 - 132166 -115 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288575679|ref|ZP_05977412.2| ## NR: gi|288575679|ref|ZP_05977412.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996] # 4 169 1 169 180 102 41.0 9e-21 MPNLFQHTAARRRLAKRLQDVRTWVSFNTQPPEDGWFTVFFRSSDGTCFNTQPPEDGWEN STATPSKICHVSTHSRPKTAGFSHRRGFIIKQVSTHSRPKTAGLDLSAFLRRRFCFNTQP PEDGWTSTFFSLYGLKGFNTQPPEDGWVISQASASISGLFQHTAARRRLAPVGGQLVNHV WFQHTAARRRLGESRGHS >gi|241319421|gb|ACQV01000024.1| GENE 130 132930 - 133223 433 97 aa, chain - ## HITS:1 COG:SPy1561 KEGG:ns NR:ns ## COG: SPy1561 COG1343 # Protein_GI_number: 15675453 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 97 1 97 97 96 47.0 9e-21 MLMLITYDISLEDAEGQARLRRVAKLCLDYGVRVQYSVFECDIAPDQWVVLKDKLLKTYN PETDSLRFYHLGSKWRRKVEHHGAKPAVDVFKDTLIV >gi|241319421|gb|ACQV01000024.1| GENE 131 133298 - 134311 869 337 aa, chain - ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 337 1 343 343 326 47.0 5e-89 MRKLQNTLYITTQSSYLHKERETLVVEQERKKVAQLPVHSIGHIFCFGNVLVSPFLLGFC GENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRVSEQNPVPIARNIIAAKIQASKRV LQRQIRNYGENAAIQSAVNALNISLRQLKGAAELDVVRGIEGDAAARYFGVFGQLLSEKS GFTFDGRNRRPPRDGVNALLSFVYSILGKDISGALQGVGLDPQVGFLHADRPGRDSLAQD ILEEFRAWWADRLVLSLINRGQIKPQDFVTEASGAVSLKADARKLLFQALQAKKQEKIVH PFLGEEVEIGLLPYIQAMLLARHLRGDLAEYPPFLMR >gi|241319421|gb|ACQV01000024.1| GENE 132 134655 - 135212 427 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760157|ref|ZP_04758255.1| ## NR: gi|241760157|ref|ZP_04758255.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 185 1 185 185 269 100.0 5e-71 MNIFFDMNNNFQWGSIAALVALIAAIMQMFNNKKSIDANLKAKSRVEWIQNVRKLSADFI RISYEYKGLMDKYIEIDNEKNILFIDKEIENDDKDKIDMKWAEFLYTYNLLLLYFQKGEN IDEFNKISNNKIIQSARELRNQVKNYRYKVNGMKGNPFYEQGVKPFRDNMREYLKGEWDR AKSGK >gi|241319421|gb|ACQV01000024.1| GENE 133 135217 - 135873 580 218 aa, chain - ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 20 212 11 214 224 144 41.0 8e-35 MTALLTETQRENQDTRLIPLSALQHYAFCPRQCALIHNEQAWAENYLTAQGKALHERVDS GEPETRKGVRFERTVHVSAEKLGINGVLDLVEVDTKTGRLKPVEYKRGKPKLDPMDEIQL CAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDDLRTQTLATIAAVLELLNSGQTPPP NYGKRCKACSLVEICQPELLGKRDRSVGYVINLFNNME >gi|241319421|gb|ACQV01000024.1| GENE 134 135888 - 136754 1335 288 aa, chain - ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 285 1 278 283 132 33.0 6e-31 MSAIQNRYEFVYFFDVTNGNPNGDPDAGNMPRLDPESSKGLVTDVCLKRKIRNFVEISSE NEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKDEAKARDITAWMCKNFFDIRTFG AVMTTEVNSGQVRGPVQLAFAQSIDPIVPLEVSITRMAVTNEKDLEKERTMGRKYIVPYA LYRVHGFISANLAAKTGFSDDDLAKLWQALALMFEHDRSAARGEMAARKLIVFKHDSALG SQPAHKLFDAVKVERVNGESGTPASGFDDYKISVVSDGLNGVSVEELL >gi|241319421|gb|ACQV01000024.1| GENE 135 136766 - 138544 1653 592 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_0331 NR:ns ## KEGG: NT05HA_0331 # Name: not_defined # Def: crispr-associated protein, Csd1 family # Organism: A.aphrophilus # Pathway: not_defined # 1 592 1 596 596 1141 95.0 0 MILASLARYYRRLAAENDEMGNPKVPPYGFSEEKIGWILVLDKEGRLKTVVPNLTADKKP QPKLMSVPRPEKRTSGIKPNFLWDKTAYALGVEANKNKAEAKEKPFTPSEKTFDAFKQYH LDLLQNSEDEGLQALCRFLQIWQPAHFAAENLPAEILDANIAFSLEKPTALIHKREAAQS LWAGCLKSDEALEGLCLISGDTAPIARLHPAIKGVFGGQSSGGSIISFNKEAFASFGKEQ GANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDASTVFWAEADDNATAQAAEGFFAHVF TPPDDEQESAKIFNVLEQIGKGRPLQEIAPELSANTRFYVLGLAPNAARISVRFWLDTTF GQLAENLAQHWQDLALEPCAWKTPPSIWRLLLQTAVLGKSENISPVLAGEMTRAVICGTP YPLSLLSQLITRIRADGDVNGLRVAMMKAVLERRFRKGFIEEGVPMSLNNESPNCAYLLG RLFAVLERIQYQALGELNAGIADRYYGSASAVPFSVFPRLLSGAKHHLSRLRKDKAGMAV NLDKDLGEIIAKLPETFPRHLSIDEQGRFAIGYYHQKQSYFAKKETAETIEN >gi|241319421|gb|ACQV01000024.1| GENE 136 138541 - 139215 402 224 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_0330 NR:ns ## KEGG: NT05HA_0330 # Name: not_defined # Def: crispr-associated protein Cas5, dvulg subtype # Organism: A.aphrophilus # Pathway: not_defined # 1 224 1 224 224 450 97.0 1e-125 MNQIRLHVWGDYACFTRPEMKVERVSYDVITPSAARGILAAVHWKPAIRWVIDRIYVLKP IRFESVRRNELGGKISAGKVSGAMKRKSVADLYTLIEDDRQQRAATVLKNVAYVIEAHAV LTAKAGADETVTKHIEMFKRRAKKGQCFQQPCLGVREFPADFALIDEGELLPLSALSESE ANRDLGWMLHDIDFDHGNTPHFFRAQMKDGVIDVPPFYAEEVKA >gi|241319421|gb|ACQV01000024.1| GENE 137 139301 - 139933 278 210 aa, chain - ## HITS:1 COG:no KEGG:ASA_1617 NR:ns ## KEGG: ASA_1617 # Name: not_defined # Def: hypothetical protein # Organism: A.salmonicida # Pathway: not_defined # 1 210 277 487 491 258 59.0 1e-67 MQRSVALALLQVYAEELARDQERGQTKPFYLFIDEPELCLHPKGQTKLLEALLEISKTKQ VFLTTHSPYFLVTPHLRNVGLFIFRKDGISNIVEDASLEPMFPWSPTWGEINFKAYKLPT VELHNELYGRLQDKNGKFSERDFEQWINAQGIQFSKHWARVNSDGTVRQPYPVSLQTFIR NHIHHPENRQNTLYTEDELKQSIEEMIRLL >gi|241319421|gb|ACQV01000024.1| GENE 138 140785 - 143073 1715 762 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 25 720 14 765 800 316 30.0 9e-86 MKPLIYYAHSAQDKLGNLLPYEHWQTLQSHLVNVGEMAAEFARVFGAQEIACQTGQLHDL GKYSEPFDRRLHGGPSVDHATAGAKIAVERWGNVIGKLMAFCIAGHHAGLANGNGEGDNR RTLKQRLALQFGADIPALDNLWQQEIKLPQNLSAPPLKADAHHPFFSYAFFTRMLYSCLV DADYLDTEAFYSNLENKTVERGGYPDLNALQHNFNQFINAFRRRIAQAPEQTEAEKRNAA LNRLRSEILDHAVEQAAQAQGLFTLTVPTGGGKTFTSMAFALEHAKRHDMRRVIYVIPFT SIIEQNAAEFRKAFGELGEQAVLEHHSTFDDGKLQNEATKDKLRLASENWDAPIVVTTAV QFFESLFADRSSRCRKLHNIAGSVIILDEAQMLPLNLLLPIMQAIKELAQNYRCSVVMCT ATQPAVQAENGFYRGFENVREIAPKPTALFDKLRRTTVQHIGTQTDADLLAKLAEHPQML VIVNNRRHARSLYDQAKHLDGTFHLTTLMCAKHRSQKLDEIRGRLKNGEPCRVIATSLIE AGVDVDFPLVMRAEAGLDSVAQAAGRCNREGKRPSENSFVWIFAPEEQWKAPPELAAQAA VMRLTTNSFSDDLLSTQAVAAYFAELYQLKGSELDNKKILKMHNDTGQSLDFPFQTIADK FRMIESHMQPLIIPFDVDAENLISSLHHADHIGGLLRKLQPYTVQIPEKALAALYKAGRI ELINEKNFGKQFYTLIGLDLYDDVAGLSWEDTEFLKGESLVF >gi|241319421|gb|ACQV01000024.1| GENE 139 143195 - 144124 995 309 aa, chain - ## HITS:1 COG:NMB0927 KEGG:ns NR:ns ## COG: NMB0927 COG0596 # Protein_GI_number: 15676821 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis MC58 # 1 309 1 309 310 531 80.0 1e-151 MHPIQEPRNSGLLRVSDIHEIYWEESGNPDGHPVIFLHGGPGAGASPACRGFFNPEHFRI VIIDQRGCGRSKPYACIEDNTTWDLVADIEKVREMLGIQKWLVFGGSWGSTLSLTYAETH PERVSGLVLRGIFLCRPSEMAWLNEAGGVSQIYPAQWQKFIAPVAENKRQALIKAYHEML FSEDEATRLKAAKSWADWESYLIQFEPKDVDEDPQASLAIARMENHYFVNEGWLQGDKAI LANIGKIRHIPTIIVQGRYDLCTPMQSAWELSQAFPEAELRIVQAGHSSFDPSLSEALVK AVEDIRSKL >gi|241319421|gb|ACQV01000024.1| GENE 140 144249 - 144683 498 144 aa, chain + ## HITS:1 COG:NMB0925 KEGG:ns NR:ns ## COG: NMB0925 COG1607 # Protein_GI_number: 15676820 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 3 144 6 144 148 255 88.0 2e-68 MAGNKQTHAAPEGQLLLRTVAMPRDTNPNQDIFGGWIMSQMDLGGGILAAEIAQGRIVTV AVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKIEVWVKTLMNDMVTEDRQLVTEAVFT YVAIDSQGNPRPIPREGNAKLAHL >gi|241319421|gb|ACQV01000024.1| GENE 141 144930 - 145262 412 110 aa, chain + ## HITS:1 COG:lin0912 KEGG:ns NR:ns ## COG: lin0912 COG2116 # Protein_GI_number: 16799984 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 8 110 6 108 270 111 49.0 3e-25 MASRDLYPQEILQVVLDKSCAKAQSSIPTLAILSVLAGGYIGFGYLAYLKVVSGIPHEWS DFATLLGAAVFPIALICILLGGGELVTSNMMIMSLGRLAGRISSKMLLRN >gi|241319421|gb|ACQV01000024.1| GENE 142 145275 - 145721 588 148 aa, chain + ## HITS:1 COG:BS_yrhG KEGG:ns NR:ns ## COG: BS_yrhG COG2116 # Protein_GI_number: 16079774 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Bacillus subtilis # 3 139 116 252 266 149 55.0 2e-36 MGNLVGTLAMAFLLGYYVGMIEGSVAEKTIVVAEAKVHMDFGRAFVSAVACNWMVCMSAW LHFAAKNTTGRMLAIWFPVMIFVLNGFQHLVANMFVIPAGILAGANITWGQFFFNMIPVF LGNVVGGASFVGASYLYTYKDTLKDSTK >gi|241319421|gb|ACQV01000024.1| GENE 143 146110 - 147633 1838 507 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 2 505 3 502 508 712 67 0.0 MTVIKQEDFIQSIFDAFQFISYYHPKDYIQALYKAYQKEENPAAKDAMAQILVNSRMCAE GHRPICQDTGIATVFLKVGMDVQWDAEMSVQEMVNEGVRRAYTYPDNKLRASVLADPAGK RQNTKDNTPAVVHMEIVKGDKVEVTCAAKGGGSENKTKVAMLNPSDNIVDWVLKTVPQMG AGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELKEKADSGAELSTTEALRLELYKK VNALGIGAQGLGGLSTVLDVKILDYPTHAASKPIAMIPNCAATRHIEFELDGSGPAKLEA PSLEDWPDLTYSPDNGKRVDVNNLTKEEVATWKIGDVLLLNGKILTGRDAAHKRLIDMLN KGEELPVDFTNKLIYYVGPVDPVRDEVVGPAGPTTSTRMDKFTRQMLEQTGLLGMIGKSE RGAATCQAIADNKAVYLMAVGGAAYLVAKAIKASKVLAFPELGMEAIYEFEVKDMPVTVA VDSNGESVHAIAPKQWQAKIGIIPVEA >gi|241319421|gb|ACQV01000024.1| GENE 144 148488 - 149126 797 212 aa, chain + ## HITS:1 COG:no KEGG:AZC_0123 NR:ns ## KEGG: AZC_0123 # Name: not_defined # Def: 4Fe-4S ferredoxin # Organism: A.caulinodans # Pathway: not_defined # 8 211 60 263 272 266 64.0 3e-70 MSENLLTLTIDGHEVKASADSSIIQTYAHAGSAITANVGCMGQGVCGSCRCMIRKEGERE VTTALACETKVEEGMQVSFLDYFIPEHIQYYDVSEVGDGWNWLDDTAKAFPEAQHCRHCG GCNRACPKGLEVENGVAQVVSEDFGAAALTFDQCVMCNLCTLSCPEHIRPNHLGLFARRM RAARTLRPVDLMRRLREIDSGKMKVEFEEEAM >gi|241319421|gb|ACQV01000024.1| GENE 145 149126 - 149314 286 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760131|ref|ZP_04758229.1| ## NR: gi|241760131|ref|ZP_04758229.1| hypothetical protein NEIFL0001_1344 [Neisseria flavescens SK114] # 1 62 1 62 62 111 100.0 2e-23 MANEIQGIDYETALANLRASSLELRGDLPEKNELLSQFHPDYQAKCARQTAHRSEHGRLL PS >gi|241319421|gb|ACQV01000024.1| GENE 146 149316 - 150755 2142 479 aa, chain + ## HITS:1 COG:MK0828 KEGG:ns NR:ns ## COG: MK0828 COG1053 # Protein_GI_number: 20094264 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Methanopyrus kandleri AV19 # 20 428 2 409 556 246 41.0 8e-65 MAKLLISHPLIDDYDLSGAEHLNTDVLVIGGGGAGAAAALSATEAGARVIMANKLRIGDS NTVMAEGGIQAAVGAEDSLQQHFDDTIKGGHNAGKKELVAQMVTDAPSAIRWLIGLGMTF DLAKGADSNGMLSRKRAGGTTVPRILSYRDFTGLEMMRVLREAVELDENIIQLNRHPAIE LLSDEHGRCVGAILYDLEKRSLVLVHAKAVVLATGGSGRLHLQGFATSNHYGATADGLVM AYRIGAKLRDIDSFQYHPTGVAHPPHLAGALISEAVRSAGIKLVNGLGERFVDELQPRDV VAAAILRECREGRGVVRDGQVGVFLDTPRLIENDPDVLNRLVTLGHVAHKCGIDPAVEPV MIHPTLHYQNGGVEINGDGATCVEGLYCAGEVTGGIHGRNRLMGNALLDIISFGRRAGKA AAGCGLPLKKVRGGVGHVHDLQREMTRAGLTSDIKAPVLYPDYGKFDLREHAGLQEQQS >gi|241319421|gb|ACQV01000024.1| GENE 147 150752 - 151993 1673 413 aa, chain + ## HITS:1 COG:STM2324 KEGG:ns NR:ns ## COG: STM2324 COG1894 # Protein_GI_number: 16765651 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Salmonella typhimurium LT2 # 19 406 26 419 445 285 43.0 1e-76 MNQANQNLLHPSRQVGADLAAWRKVGGGEGLLAALADPQSIVSKLQDANLCGMGGAGFPT WHKWEAAVAAQSKHGDKYVVCNANEDEPGTFKDRVLLAKTPHQVIEGVLIAAVACRANKA IMYQTESIAAIVPAIEQWKKSDLFIRIENYLGKPLDLKLVETSGRYIGGEETAVISWLEG GFPFPRRKPPFPAESGVAGEPTLINNTETFANIPQILAKGAEWYKSLGLGDAAGTKLYSL SGDVLNPGLYELPMGTTLQSLIFDHGGGMLEGRTFKAVFTGGPSNTLLTAKDLDVPLDFV SVRERKSSLGTGAMIVISEGTSVVRKVAEYVEFFASNSCGQCPPCKGGTFQLSRLLNRVD TGIGTSDDLRALQSLCQLLPRSGRCGLIDGAVTVLQSSLRTFPEEYGLPAEQD >gi|241319421|gb|ACQV01000024.1| GENE 148 152453 - 153880 2275 475 aa, chain + ## HITS:1 COG:NMB0470 KEGG:ns NR:ns ## COG: NMB0470 COG0471 # Protein_GI_number: 15676381 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 1 473 4 478 488 496 63.0 1e-140 MGFKPIPAAVALVLTLLIWFVIPVPQGVSPDAWHLLALFVGIIAGIIGKAMPIGAMAILG ITLVALTGVTNEKAADATKDALSSLNNSLIWMIGIAIIISRGLLKTGLGMRIGYLLISLF GKRTLGVGYSLALADLVISPVTPSNTARGGAIVHPIMRSIALSFDSDPEKGTEGKIGKYL ALVNYHANIITCCIFITATAPNPLVVELVAKATDSQIHLSWGTWFAAMVVPGLVAMFLMP LVLYFLYPPEIKQTPNATALAKEKLKEMGAMKRDEKIMLGIFVILLLLWAGVPEMLFGVK VDATATTFLGLSLCLLTGVLTWDDALKEKGAWDTIVWFAALVMMANFLNKLGLIAWLSES MQGGIAHMGLSWEAGCALLMLAYLYAHYVFASGTAHVTAMFGAFYGAGLALGAPPMLFAL VMASATGIMMSLTHYATGSAPVIYCSNYVTMTEWWKAGFIMSVLEILIFGTVGIL >gi|241319421|gb|ACQV01000024.1| GENE 149 154000 - 155412 2251 470 aa, chain + ## HITS:1 COG:NMA1813 KEGG:ns NR:ns ## COG: NMA1813 COG0569 # Protein_GI_number: 15794703 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Neisseria meningitidis Z2491 # 1 470 1 470 470 755 81.0 0 MKILILGSGQVGSTVAQNLASVPSNDVTIIDIDEKALNRISSRLDVQTIVGNGASPFTLE QAGAADSDLLLALTRSDETNIVASKIAADLFNIPSRIARVRSSEYLEYPVAGSDKPEEGS LNIFGITETISPEQLVTEQLVGLLNYTSSLQVLSFANDQVRMVIVQARKGGLLIGREITD INQHLPEGVDCQICAVYRNNRLIVPTPQTVIIEGDEVLFAADINSVEAIMRELRPKEART RRIMIAGGGNIGYRLAKQLESKYDIKIIEYKPHRAEWLAENLDNTLVLQGSATDETLLDE EYIDEIDVFCALTNDDENNIMSSLLAKNLGAKRVITIVNRSSYVDLLEGNKIDIVVSPHL ITIGSILAHIRRGDIVAVHPLRRGTAEAIEVVVHGDKNTSAIVGRRISGIKWPSDCHIAA IVRGETGEVIMGHHTETILQDGDHIIFFVSRRRVLPELEKLIQVKMGFFG >gi|241319421|gb|ACQV01000024.1| GENE 150 155490 - 156350 1256 286 aa, chain - ## HITS:1 COG:NMA1273 KEGG:ns NR:ns ## COG: NMA1273 COG0682 # Protein_GI_number: 15794204 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Neisseria meningitidis Z2491 # 1 280 1 280 283 488 89.0 1e-138 MIIHPQFDPVLISIGPLAIRWYALSYIVGFILFTILGRRRIAQGNSVFTKEMLDDFLTWG ILGVILGGRIGYVLFYKFSDYLANPLDIFKVWEGGMSFHGGFLGVVVAMWLFGRKHNISI LKLMDTVAPLVPLGLASGRIGNFINGELWGRVTELNAFWAMGFPQAHYEDAEAAAHNPLW AEWLQQYGMLPRHPSQLYQFALEGICLFVIVWIFSKKPRPAGQTAALFLGGYGLFRFIAE FARQPDDYLGLLTLGLSMGQWLSVPMIVLGAIGFVWFGRKNSVAKA >gi|241319421|gb|ACQV01000024.1| GENE 151 156425 - 157552 1670 375 aa, chain - ## HITS:1 COG:NMA1274 KEGG:ns NR:ns ## COG: NMA1274 COG2866 # Protein_GI_number: 15794205 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 1 375 2 376 376 723 90.0 0 MKISTQFDAGSVVVKDLSNPADIRLALRPDNASEFAQWFYFRLQGAAYQNCVMHFENAAD AAYPLGWEDYQACASYDRQNWFRVPTSYENGVLTINHTPLSNSVYYAYFEPYSHEQHLNL LGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDMKVWIIARQHPGETMAEWFVEGLL GRLLDPQDPTARMLLDRATFYIVPNMNPDGSVLGNLRTNAAGANLNREWETPTLERSPEV FTVREKMMETGVDLFLDIHGDEGLPFVFVAGTEGVPNYNERIEALEDQFKLALLNASPDF QDDYGYDKDAPGQANMTLATNWVGNHFNCLAYTLEMPFKDNANLPDDDFGWNGQRSLRLG EAMLSAILNVVGDLR >gi|241319421|gb|ACQV01000024.1| GENE 152 157730 - 158617 1365 295 aa, chain + ## HITS:1 COG:NMA1275 KEGG:ns NR:ns ## COG: NMA1275 COG0548 # Protein_GI_number: 15794206 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Neisseria meningitidis Z2491 # 1 295 1 295 298 454 83.0 1e-127 MTQQQSVSPAIKARVLAESLPYIRRFSGSIIVIKYGGNAMTEPALKEGFARDVVLLKLIG LHPVIVHGGGPQINEMLEKVGKKGEFVQGMRVTDSETMDIVEMVLGGHVNKEIVSMITTF GGRAVGITGRDNHFIKAEKLLIDTPEQKGVDIGQVGTVADIDTRLVEGLVERGCIPVIAP IGVGQNGEAFNINADLVAGKLAEKLQAEKLLMMTNIPGVMDKEGKLLTTLTPSRIDELIE DGTLYGGMLPKIASAVEAAKSGVKATHIIDGRVPNALLLEVLTDDGVGSMILGAG >gi|241319421|gb|ACQV01000024.1| GENE 153 158879 - 160165 2091 428 aa, chain + ## HITS:1 COG:NMB1285 KEGG:ns NR:ns ## COG: NMB1285 COG0148 # Protein_GI_number: 15677152 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Neisseria meningitidis MC58 # 1 428 1 428 428 806 96.0 0 MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTGQKEALELRDGDKSRYL GKGVLKAVDHVNNQIAQALIGIDANEQSYIDQIMIELDGTENKGNLGANATLAVSMAVAR AAAEDAGLPLYRYLGGAGPMALPVPMMNVINGGEHANNSLNIQEFMIMPVGAKSFREALR CGAEIFHALKKLCDAKGFPTTVGDEGGFAPNLNSHKEALQLIVEATEAAGYKAGEDVLFA LDCASSEFYKDGQYHLEAEGRSYTSAEFAEYLEGLINEFPIVSIEDGMDENDWEGWKLLT EKLGGRVQLVGDDLFVTNPKILAEGIEKGVANALLVKVNQIGTLSETLKAVDLAKRNRYT SVMSHRSGETEDSTIADLAVATNCMQIKTGSLSRSDRMAKYNQLLRIEEELAEAAYYPGK AAFYQLGK >gi|241319421|gb|ACQV01000024.1| GENE 154 160189 - 160464 437 91 aa, chain + ## HITS:1 COG:NMA1496 KEGG:ns NR:ns ## COG: NMA1496 COG2919 # Protein_GI_number: 15794396 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 92 129 72.0 1e-30 MKWVTFVLTFALLCCQYSLWFGKGSVGHTEELQEQLVRQEEKNQTLTLRNNFLNAEVEDL AHGQEAIAEIARVELGYVQDGEVYYRIIDRR >gi|241319421|gb|ACQV01000024.1| GENE 155 160566 - 161057 560 163 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1426 NR:ns ## KEGG: NMCC_1426 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 158 1 156 156 231 74.0 7e-60 MYDVNTHDVRRFFAHVWQHRLAPLQLDGLQQKALRIIEAHPEYGHYLEDIEQYLDKEWLP EDGESNPFLHMSLHLSLQEQSAIDQPPGIRAIHQQLCARYNGDWVKAEHDMMEALAETIW EAQRYERGLDVNAYMTRLRKLVGLGQEEKARLNPHEVGLMDTK >gi|241319421|gb|ACQV01000024.1| GENE 156 161170 - 161877 1026 235 aa, chain + ## HITS:1 COG:NMA1059 KEGG:ns NR:ns ## COG: NMA1059 COG3471 # Protein_GI_number: 15794008 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Neisseria meningitidis Z2491 # 1 234 1 233 234 253 59.0 3e-67 MLRPALTALLLATSLPVAAESLNYNIVEFSESANMEVPRDTMTAHFSVNAEGKDRQAVNQ AFMKKFNQFNKISQNSKFKAELMERNASPRYQYTNGKRTQTGWEEHAYFKVESKDFEALN RLIADSINIAVLENSSFSVSKEKREETVDQLSKAVILRFKDRAQNLAQTLGFSSYKIVKL NLGHIGNRQVGGDFAHAKMLRAIPAAEMAAGIEDGIPASPGSEEISLTVSGSVQM >gi|241319421|gb|ACQV01000024.1| GENE 157 162437 - 164203 615 588 aa, chain + ## HITS:1 COG:AGpA30 KEGG:ns NR:ns ## COG: AGpA30 COG4928 # Protein_GI_number: 16119253 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 585 1 602 632 318 32.0 2e-86 MWSDTESKEDYLNFGEVSQIVTEILETEAMLPVSIGVFGNWGAGKSSLLNLIEQQIKPDE WIIIKFDAWLYQGFDDARAALLETIASHLIQAAKDEETILQKSKNLFARINGLRLLGLMA EGAALAAGVPTFGLISKTFETAKESLDGVQNETESKQIVEVGKNLVDSGKNLIKPKEKQT PPQQIDEFRKEYGEILQDLGKNLVIVIDNLDRCLPANAIQTLEAIRLFLFLNRTAFIIAA DEEMIRHSVAEHYKDLSYRHQIDYLDKLIQIPIRVPKAGVLEIRAYLYMLYAIHQKIPTA KLASLRQFLETHLQQSWKSQSLNPEDVTKTIEEQHNQVLLSDFERANRIAPLLANSPNVY GNPRIVKRILNTIKMRTKIADKRQMPLDEAIITKLVIFERCVDSDVVTKFYQLVNEGEGK PELLKELENNNEQNLSKLSENKSIQTFITEWVKLEPKLSNVDLRAAIYLSRETILLNTYT AQLSQKAQDVLSILLVTKSKTGSQNTQTAIQGLTIDEQISVMEALIEQLRKLDNWDESPD GFIGACLLAANSEDGAKILTRFIAELRNKGVNQPWFNTRLKRETWYQE >gi|241319421|gb|ACQV01000024.1| GENE 158 164207 - 164947 254 246 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_2218 NR:ns ## KEGG: NT05HA_2218 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 246 1 246 246 441 89.0 1e-123 MGTSQSSVGPNGRSPLLPAWVDDNQATTQTPDPQRLRGLRQAIGRAVRGGGRGDVRKALG HYARKASGGKHTAVQKLGKITQAGSDLFGIFSGGRQQQYSVNLHSLNGQPCEQVINQITE LLAGHHGDSDKIRSAMNIALSEALEGMTTFDENSITTEVIGRMMVCYLTESIFLQIAHDA GKAWKKGDDPVQIARAENDLRQLIREVVDINLAPKFTDDVCQLTIEQMQDIQNQAILEIW EEWEEY >gi|241319421|gb|ACQV01000024.1| GENE 159 164947 - 166263 364 438 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_2217 NR:ns ## KEGG: NT05HA_2217 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 1 438 1 438 438 817 91.0 0 MTQLVFHHDINQLNNLQNGTIPVHLYGMGNKNLQIAHIGNMVLDRVRRLGIRLNNQVMDF LTIAMAVTAADTFVLRKDTANGWCRSFSITLPLCQPAIWQANKVHLEHILHFLSGDIWQF DFQENGQNPPQPYSQNGRTKLVDLRNKDCVCLFSGGLDSSIGAIDLLEQGHSPVLVSHSY KGDKSRQQAIIQQLNQNGYINQFSQFNAIAQPHLNNGRATEITMRTRSLNFLAFAIISAY ALQEFVQEEIDVFVPENGVISINAPLTVRRVGALSTRTTHPYFIQEIQRLFTAVNIPFTL RNPYQFKTKGQMIAECENLPLLQQIIPDTVSCSHWKRKNQQCGVCVPCLIRRASLHYAGI TNDAQYEFNDIRQILTNQDRRDDLFALISAIRQKSHRNINQWVLQSGPLPTQQLNQFANV FRSGLDEVEQLLIVNQIL >gi|241319421|gb|ACQV01000024.1| GENE 160 166269 - 166991 -115 240 aa, chain + ## HITS:1 COG:DRC0006 KEGG:ns NR:ns ## COG: DRC0006 COG0084 # Protein_GI_number: 10957545 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Deinococcus radiodurans # 2 236 5 240 244 234 47.0 1e-61 MHCHLDLYTNPQYVAKRCKDENIYVLSVTTTPKAWYGTSSLAKDCPRIRTALGLHPQLAH ERWQELDLFDELLNQTRYVGEIGLDGGKDFKTHWETQLKVFRHILRSSAKSGGKILSIHS RMSANAVLDELIQVNGNLPILHWFSGTKQQLKRAIEIGCYFSVGPAMLSSKKGYELVQLM PIEKILVETDGPFGNFKTQALLPWNANIAIAILADIWGMNISEAENILRQNLISLVSKHI >gi|241319421|gb|ACQV01000024.1| GENE 161 167004 - 167834 614 276 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 97 33.0 3e-20 MNMHKNTRLTPHHRQAIWLAYTQGKESVTSLAHRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKATDKR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTEYLIDPCPYLIECVYSDNGTKYKGSANH AFGVACYENGIGQKFARVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQASFSTCGVNNATFSYT >gi|241319421|gb|ACQV01000024.1| GENE 162 168106 - 168633 768 175 aa, chain - ## HITS:1 COG:NMA1672 KEGG:ns NR:ns ## COG: NMA1672 COG0629 # Protein_GI_number: 15794566 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Neisseria meningitidis Z2491 # 1 175 1 174 174 253 79.0 1e-67 MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSIATSETWNDRNGQRVERTEWHNITMYRKL AEIAGQYLRKGSQVYLEGRIQSRKYQGKDGIERTAYDIIANEMKMLGSRNDNSGGAPYDD GYNQGGHSSQSSYQQAPQQQYQSAPAQEPPAAPARRPAPAQPTAPVDDIDDDIPF >gi|241319421|gb|ACQV01000024.1| GENE 163 168635 - 170017 1794 460 aa, chain - ## HITS:1 COG:NMA1673 KEGG:ns NR:ns ## COG: NMA1673 COG0477 # Protein_GI_number: 15794567 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 460 2 461 461 708 86.0 0 MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAMYAASLPGAENNKALVGMAMG IYGLTQALLQLPLGMASDKFGRKKVIYAGLIVFAAGSFLAAVADSLQMLVAARAIQGAGA VSAAVTALLADLTRNEVRTRAMAMIGLSIGLTFSVSLVLAPMIASFIGVSGLFALTGILT VISIGVVAWMTPDPEVSKMHEDTQAQPSRMGEVLKNRQLLNLDFGIFALHAAQMALFTAL PFAMTQLGLEKIHHWQVYLPSTITGLIIMVPLIIVGETRNKLKQVFILGIVCIAAAQIGL LFGMHSVWLITAYLIVYFIGFNVLEASLPSMVSKIAPSDLKGTAMGVYNTMQSVGLFVGG ATGGLLFQKYGFVGVFAFCSVLMLLWLVLAVISPAPKPVKNLSYPLNAEWQQNPDLLYQK LTEIEGVESISFSADKQTIYIKALQKGFDQEAAEKIITGV >gi|241319421|gb|ACQV01000024.1| GENE 164 170218 - 170841 733 207 aa, chain - ## HITS:1 COG:NMA1674 KEGG:ns NR:ns ## COG: NMA1674 COG0741 # Protein_GI_number: 15794568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis Z2491 # 11 206 12 206 207 312 84.0 2e-85 MKSENQDSLFLSRRRLLQVGGAMLLTPATAWAGAQREETLADDVASVMRSSINSASPARL VFADSREGERWLAAMSSRLARFIPDEGERRRLLVNIQYESSRAGLNTQVILGLIEVESAF RQYAISGVGARGLMQVMPFWKNYIGNPSHNLFDIRTNLRYGCTILRHYNNIEKGNIVRSL ARFNGSLGSNKYPNAVLGAWRNRWQWG >gi|241319421|gb|ACQV01000024.1| GENE 165 171015 - 172523 2181 502 aa, chain + ## HITS:1 COG:NMB1467 KEGG:ns NR:ns ## COG: NMB1467 COG0248 # Protein_GI_number: 15677321 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Neisseria meningitidis MC58 # 1 501 1 501 502 864 85.0 0 MTTTPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFAAGLDEQKNLSEASQEQ ALECLAKFGERLRGFQPENVRVVATNTFRVAKNIAQFLPRAEAALGFPIEVIAGREEARL IYTGVVHTLPPKGDKMLVIDIGGGSTEFVIGSDLQPLTTESLPLGCVTYSMRFFQNKVTA KDFQAAVSAARIEIQRISKMMKRTGWDFAIGTSGSAKSIRDVLAAELPQEADITAQGMRY LADRIIEAGSVKKAKFENLKPERIEVFAGGLAVMMAAFEELSLTKMTVTEAALRDGVFYD LIGRSLNVDMREQTTAEFQKRYHVSLNQAKRVADTAQAFMNSLCHAKNVTVQELALWNQY LSRAGRLHEIGLDIAHTGYHKHSAYILENADMPGFSRKEQTILAQLVIGHRGDLKKMADI IGNNEIMWCAVLSLRLAALFCRSRLPLDLPPQTQLRVDENNHSFILRINAQWLEQHPLIA DALDYESAQWQKIDMPFSVQAQ >gi|241319421|gb|ACQV01000024.1| GENE 166 172611 - 172982 753 123 aa, chain + ## HITS:1 COG:NMB1373 KEGG:ns NR:ns ## COG: NMB1373 COG0858 # Protein_GI_number: 15677238 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Neisseria meningitidis MC58 # 1 123 1 123 123 200 89.0 6e-52 MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVEVTRDYSHATVFYTVLD DSTRDITEEALEHAKGHLRSELAKRIKLFKTPELHFKYDESLERGMSISSLIDQVAAEKP VED >gi|241319421|gb|ACQV01000024.1| GENE 167 173050 - 173964 1338 304 aa, chain + ## HITS:1 COG:NMA1588 KEGG:ns NR:ns ## COG: NMA1588 COG0130 # Protein_GI_number: 15794481 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Neisseria meningitidis Z2491 # 1 302 1 302 306 530 88.0 1e-150 MTNKPTKRPVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHTGVLDPLATGLLPVCFGE ATKFAQYLIDADKAYTATLKLGEASSTGDAEGEIVATARADISLSEFQTACQALTGDIRQ VPPMFSALKHEGKPLYEYARKGIVIERKARDITIYSIDITEFDAPKAVIDVRCSKGTYIR TLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEALAKLDEAERDALLLPCDVLVQHF PKLELNDYAVTMLKHGQRPQFTEDISAEQPIRVYSRDGTFIGLVEYQKEIGRLKALRLMN TADK >gi|241319421|gb|ACQV01000024.1| GENE 168 173987 - 174613 228 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 [Vibrio harveyi HY01] # 1 208 7 214 512 92 30 1e-17 MKVYTAAQMREREQAAVDKGTSFDQLMENAGNSAAQDLMQRHPQAGRALIVCGKGNNGGD GLVMARYMQAQGWHIDILFSLGENLSPLAQTNRERLNGLPYIEFITKQELEGRLKKGYDI IIEGIFGTGFSGALPTEITALCRQLNHSDGLKVALDIPTGLNCDTAEADPDTFRADLTYT FAAYKPAHLSESGKTYCQETVCLPIGID >gi|241319421|gb|ACQV01000024.1| GENE 169 174663 - 175022 296 119 aa, chain - ## HITS:1 COG:NMB1065 KEGG:ns NR:ns ## COG: NMB1065 COG0239 # Protein_GI_number: 15676949 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Neisseria meningitidis MC58 # 1 115 1 115 119 94 53.0 3e-20 MFAYIFPIVCGAAVGAVLRWLFGLLLVSSAPFSIGTLAANWLGALLIGVLAELLTDPQWR LLWITGFLGSLTTFSGFSVEMVGLMQAQRWGMALMASCLHVFGSFGLTALGIKLAQIWK >gi|241319421|gb|ACQV01000024.1| GENE 170 175106 - 175783 380 225 aa, chain - ## HITS:1 COG:NMA1265 KEGG:ns NR:ns ## COG: NMA1265 COG3235 # Protein_GI_number: 15794198 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 225 1 226 226 193 55.0 2e-49 MIFQNGWFPVGVVMAAWPVLLVIFALCAKQAWVSVSQHRSAFLVAAVMLPLAWSLNASPE SGQLAGMSYHLLALNLTALMLGTSAAFCLGVLLFFPYLWLWGDWHMFSINALSVLLPPLL VNLGFRHWVSRLPANIFIFIFLNGFWAAAVGMVFTGVILVGLLDWVDVFDTAVLWKTAFP VFFLIAWAEAFLSGISTAIFIALKPQWICTFDDDRYLKSAPKIWQ >gi|241319421|gb|ACQV01000024.1| GENE 171 175948 - 179001 4020 1017 aa, chain + ## HITS:1 COG:NMB1067 KEGG:ns NR:ns ## COG: NMB1067 COG1674 # Protein_GI_number: 15676951 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Neisseria meningitidis MC58 # 130 1009 150 1008 1014 868 60.0 0 MLWTILALILLAVIAGLFWWRQKQEQKWRHELARLSGDEQEINEEDSPVGFFDQLDSLKR LFSMNKRTADNHKIARIRLLSVLEHNKMKRAETNEEHAAEPFTEELEHITATEEEIKVAP KTRKSAKPERIPKITPFAQMETPEYSPSLVQNSNFEEITLEEATRSLHEAAVEEWNEHLA EKNAPIYKDEVETPLLRASSLPMTGMEIIDYNDPILRRTRERALARANNVRVAEANAPHI ETVQTALRTAEKEAILPYTSMQAFPSEIQAEDIHNNLARRTAARHKLAEAVAPLRGYSPR TIENDEILANLGQISRPASLRRQVRYTEAAAERWARKQAATEAVAPRPAAPATPSRPKPA APVKKSPYISRPATPNATVVEPPAVPVVPMAKTDIPEPPVFQTSIAPIDIPEPPAFGHKI QVPIFDAQVNAHVSNQPERSIHDYLISESAVEETEFDSEPEATVQPEAEAIQAVEAIEPV ESVETISRPSEYTQTAVETPVQTVEPSVQESTPSVVHPTSATLTDARLPTTALLLPPQFD PSASQTEEQLLENSITIEEKLAEFKVKVKVMDSYSGPVITRYEIEPDVGVRGSAVLNLEK DLARSLGVASIRVVETIPGKTCMGLELPNPKRQMIRLSEIFNSPAFTESKSKLTLALGQD ITGQPVVTDLAKAPHLLVAGTTGSGKSVGVNAMILSMLFKATPEDVRMIMIDPKMLELSI YEGIPHLLAPVVTDMKLAANALNWCVNEMEKRYRLMSFMGVRNLAGFNQKIAEAVARGEK IGSPFSLTPENPEPLEKLPFIVVVVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILA TQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTGYPQ RVHGAFASDNEVHRVVEYLKQFGAPNYIDDILSSGSTEDFTGTSRSNDSDLDPMYDEAVS VVLKSRKASISNIQRQLRIGYNRAARLIDQMEADGIVSPAENNGNRTILAQSSEHLD >gi|241319421|gb|ACQV01000024.1| GENE 172 179116 - 179850 1018 244 aa, chain + ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 15 243 3 231 231 287 72.0 1e-77 MPSATPHPLRGKTNKKYFAEFFGTFWLVFGGCGSAVLAAAYPELGIGFTGVALAFGLTVL TMAYAVGHISGGHFNPAVSVGLFIGGRFNGKDLLPYIVSQVIGAIAAAGVLYLIASGKTG FDAVASGFASNGFGEHSPNGYDMMAALLIEFVLTTFFLIIIMGSTDKLAPAGFAPITIGL GLTLIHLISIPVTNTSVNPARSTGVALFQGGWAVEQLWLFWLAPIAGAAVGAAIYRFVLA NDDK >gi|241319421|gb|ACQV01000024.1| GENE 173 179998 - 180330 402 110 aa, chain + ## HITS:1 COG:no KEGG:NGK_0618 NR:ns ## KEGG: NGK_0618 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 110 1 110 110 146 71.0 2e-34 MQTLPFQTDIADRMLVNTENETIHPDAVFVQTQNGYWIAWHDQQAALLAPDTPPDIPCFW VEGAESLEELVSMVENGEFDEVEEFDGDDDAWQEALGCGHHHEGHCGCSH >gi|241319421|gb|ACQV01000024.1| GENE 174 180318 - 180596 413 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760128|ref|ZP_04758226.1| ## NR: gi|241760128|ref|ZP_04758226.1| hypothetical protein NEIFL0001_1377 [Neisseria flavescens SK114] # 1 92 1 92 92 118 100.0 1e-25 MQSLRCTNRLIPALALCLTLNGCVVGAAVDLAATTVLTAGKLVVKGTGAVIDAAIPDGKK DKDKEKEKEKSKEKPKSEEIVYKEESSDEVTQ >gi|241319421|gb|ACQV01000024.1| GENE 175 180656 - 181330 707 224 aa, chain - ## HITS:1 COG:NMB1038 KEGG:ns NR:ns ## COG: NMB1038 COG2003 # Protein_GI_number: 15676925 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Neisseria meningitidis MC58 # 1 224 1 224 225 344 79.0 8e-95 MSIKEWPEGERPREKLLAHGAAALSDAELLAILLRVGTRGMSAVDLARYLLSEFGSLGKL MSADAKTLAAYKGMGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHE KIEVSVALLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSA RPSESDVQFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM >gi|241319421|gb|ACQV01000024.1| GENE 176 181368 - 182021 361 217 aa, chain - ## HITS:1 COG:NMB1411 KEGG:ns NR:ns ## COG: NMB1411 COG3676 # Protein_GI_number: 15677271 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 217 1 217 217 365 90.0 1e-101 MQITNCKLSKRVQKKLLEFFVLQVTSRSAADILGIQPNSAILFYRKIRMVISHYLALVAD EVFEGPVELDESYFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK KKTMPDSIVYTDSLSSYDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY NGIDRKSFPLFLKECEFRFNFGTPSQQLKTLRYWCGI >gi|241319421|gb|ACQV01000024.1| GENE 177 182552 - 183676 1372 374 aa, chain + ## HITS:1 COG:NMB0610 KEGG:ns NR:ns ## COG: NMB0610 COG3842 # Protein_GI_number: 15676514 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Neisseria meningitidis MC58 # 1 373 46 418 419 728 92.0 0 MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAG MESPNQGKIILDGQDITKLAPYERPINMMFQSYALFPHMSVEQNIAFGLKQDKMPKGEID ARVEEMLRLVQMTKYAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQ TQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSDGQLRQVGTPSDVYDYPNSRFTA EFIGETNIFDGVVVDDRADFSIVKCDGLENHVRIDHGLGVPNDHEIWISIRPEDIDLHKE KPEHLGAHNWAQGTVKEIAYLGSFAIYHIKLANGRVVKSQVPAPYWYVRNITPPTWDETV YISWPENQPTPLFS >gi|241319421|gb|ACQV01000024.1| GENE 178 183692 - 184657 1352 321 aa, chain + ## HITS:1 COG:NMB0611 KEGG:ns NR:ns ## COG: NMB0611 COG1176 # Protein_GI_number: 15676515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Neisseria meningitidis MC58 # 1 321 1 321 321 555 95.0 1e-158 MNLKKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFAEQEIAIPPFTPLTTID EDLGRLNIAISYQNYADIFQNFWNTLNPFGDSENSNIYLMTYWSSIKTALTTTIICLLIG YPTAYAISRANPAARNGLLLAIRLPFWTSFLLRVYAWMGLLGHNGIINNFLIKYGIISEP LDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLLEAASDLGAGPIKSFFTITLPLS KTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKVLWQAFFDQNNWPLASAVAVVMVAL LVVPIALFQHYENRELEEGGK >gi|241319421|gb|ACQV01000024.1| GENE 179 184657 - 185544 1464 295 aa, chain + ## HITS:1 COG:NMB0612 KEGG:ns NR:ns ## COG: NMB0612 COG1177 # Protein_GI_number: 15676516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Neisseria meningitidis MC58 # 1 294 1 294 295 493 96.0 1e-139 MQKTKLSWFLKLMLLLSLAFLYIPLVVLVIYSFNESKLVTVWGGFSTKWYGALMENDTIL EAAWLSLRIAIVSSLAAVALGTLAGYAMARIKRFRGSTLFAGMISAPMVMPDVITGLSML LLIIQVQMFLQGSELLQSLYFDRGFFTIFLGHTTLCMAYITVVIRSRLVELDQSLEEAAM DLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLVITSFLSGPGSSTLPQVIFSKIK LGLDPQMNVLATILIGIIGTLVIVVNYWMMRQATKREREAAEAYRQEKLAAEKAA >gi|241319421|gb|ACQV01000024.1| GENE 180 185692 - 186987 1665 431 aa, chain + ## HITS:1 COG:NMA0819 KEGG:ns NR:ns ## COG: NMA0819 COG0665 # Protein_GI_number: 15793792 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Neisseria meningitidis Z2491 # 1 430 1 430 431 789 84.0 0 MINPSFKEYLPSYYVSTANPHPSYPTLEGRLKTETCVIGGGLSGLCTALPLAENGHEVIV LEAARIGFGASGRSGGQVISDFACGMEEIEKQVGLEQAQWFWQQSLQAVELVDSRIQKHN IQCDWQRGYATVAVRPQHWEELQQWHEHAQKHYGASHYQLWDKATLKQQLASDMYQGAQF DPLSGHLHPLNYTLGIAKAAADAGAQLFEQSPMTRIEPCDNGWLVHTPNGSVECKNLVYA VNTYAGLHPKFKVLEQKAIAVSTFIIATEPLGERAKDLIRNNMAICDNRHVLDYYRLSAD GRLLFGGKDNEFIDDPDRMTELVRQDMLKVFPQLADVRIEHSWGGECDITRNLAPHFGRL APTVFYAQGYSGHGMAITGIAGLAIAEAIMGDDGRLKPFEQLRHSNIITQPFLRKLGSFL GSKYYQWKDSH >gi|241319421|gb|ACQV01000024.1| GENE 181 187096 - 188046 712 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 8 312 5 304 306 278 47 1e-73 MSNHHKLIILGSGPAGYTAAVYAARANLNPVIITGVEQGGQLMTTTEVDNWPADAGGVQG PELMARFQAHAERFGTEMIFDQIHTVDLQNRPFTLKGDMGEYTCDALIVATGASAKYLGL PSEETFAGKGVSACATCDGFFYKKQDVAVVGGGNTAVEEALYLANIANTVTLIHRRDSFR AEKIMVDKLMQRVEEGKIILKLNSSVDEILGDESGVTGARLKHNDGSTEEIAVKGVFIAI GHKPNTDIFKGQLDMDETGYLKTKGGTGDNVGATNIEGVWAAGDVKDHTYRQAITSAASG CQAALDAERWLDRHGV >gi|241319421|gb|ACQV01000024.1| GENE 182 188256 - 188492 141 78 aa, chain - ## HITS:1 COG:NMB1399 KEGG:ns NR:ns ## COG: NMB1399 COG3039 # Protein_GI_number: 15677260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 78 247 324 324 140 93.0 5e-34 MRKAHRNCPLTEAQTKRNRYLSKTHYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKA MCLNLLKAANRLSAPIAA >gi|241319421|gb|ACQV01000024.1| GENE 183 188596 - 188871 75 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|619505|emb|CAA77880.1| ## NR: gi|619505|emb|CAA77880.1| IS1106 ORF2 [Neisseria meningitidis] # 1 86 96 181 181 132 90.0 7e-30 MFALMGIGGGNVQFLDIAFRIGTGMLFVTEFVEAVFLCPTGIFVFAWCGLAADLSFFIDF YGLTLFAAGGLNNGGVNDGGGCFLYLRPFSG >gi|241319421|gb|ACQV01000024.1| GENE 184 188976 - 190991 2818 671 aa, chain - ## HITS:1 COG:no KEGG:BC1280 NR:ns ## KEGG: BC1280 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus # Pathway: not_defined # 54 146 187 279 279 104 69.0 1e-20 MKESFKLSMLAIACSIALSACGSSGGGTPSAQSAPTPQQPGNNSGSGGGGDSKQTEDAKK AEEAKKAEEAKKAEEARKAEEAKKAEEAKKAEEAKKAEEAKKAEEAKKAEEAKKAEEAKK AEEAKKAEEAKKAEDAKKAEEAKKAEDAKKANEANSGQGFGGEGKVMGKALDGGVLVAKK RETGDLEYAKTEAPTASDKNSVVLDGVAINTKDVKAGEFTLGEKSMNGGKADAAQYAVHS GDLLPDVRYGGVADVSDLRDVKQALFVQGTPSGSDTVAAQRGDATYKGIGLHFQNGLPIN TRDLQEIFETGSQAKLANLYPAAKATDVTAKVNFDQKTINVSINRYSDQTVGGGSGGNRI AGVVKSNARDMAENLSFNGDLHGNTFSNKQGTMQGGFFGAKADQLAGTYSAAGKNQRNED VVARGVFGAKRQDAAAQAGGQPDAPAAKPDAPVTQPKVDAAATELKKGETGEQYFLSNIA DLTKVVINGTTIALAPVTNKLYRTELGSDYKSFVASGNLSNVVFGVAKLADNAYSLFVQG VMSTSLPSGTAKYAGDVLNFRARNLDNKENWVGDTGGYRTTGSFTADVNFDTKTIAGKIN SGDRWFMNERAFTADITGSSFNGKWTSSDAQGSVTGGFYGDKAAEMAGRYSYHDKKDTSN NAFGVFGGKKQ >gi|241319421|gb|ACQV01000024.1| GENE 185 191204 - 191827 899 207 aa, chain - ## HITS:1 COG:NMB1669 KEGG:ns NR:ns ## COG: NMB1669 COG3230 # Protein_GI_number: 15677518 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Neisseria meningitidis MC58 # 2 207 4 209 209 365 88.0 1e-101 MSETQELTFAKRLKEQTTTIHDSVDNLVMSVEPFTNKENYIKFLKLQSVFHKAVDHIYKD SELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHETGNKAIGWLYCAEGSNLGAA FLFKHAQKLDYTGEHGARHLAPHPNGRGKHWRAFVGHLNALGLSPEAEAEAIQGAKDAFA FYKVVLRETFDLPAGAEAPEGFVPHRH >gi|241319421|gb|ACQV01000024.1| GENE 186 192280 - 192807 906 175 aa, chain + ## HITS:1 COG:NMA0833 KEGG:ns NR:ns ## COG: NMA0833 COG0663 # Protein_GI_number: 15793804 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Neisseria meningitidis Z2491 # 1 174 1 174 176 290 80.0 1e-78 MNPIRPFLDHTPQIHESCLIDETSVIIGEVSLAEDVSVWPYAVLRGDVNSISIGARSNVQ DGSVLHVSHKNAEKPEGSPLIIGEDVTVGHKVMLHGCRIGDRVLIGMGTIILDDTVIEDD VMIGAGSLVPPRKRLESGYLYVGSPVKQVRPLTEKEKEFLKYSSAHYVRLSGQHK >gi|241319421|gb|ACQV01000024.1| GENE 187 192856 - 193455 750 199 aa, chain + ## HITS:1 COG:NMA0802 KEGG:ns NR:ns ## COG: NMA0802 COG0424 # Protein_GI_number: 15793776 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Neisseria meningitidis Z2491 # 1 198 1 198 201 229 54.0 2e-60 MHTLYLASGSPRRREILENLRFKVIRIPVDIDETPHSDEKAADYVQRMAQEKNAAAVEQW LATHDASPEYPILTADTTVAYQNHILGKPETEAQAAEILARLSGQTHQVLTAVCVYWQGK THGVLQTSDVRFKTLSAEEISAYIRSGEPMDKAGAYGIQGLGGVFVEHLQGSFTGVMGLP VYETVGLLEQFGLSIPPFA >gi|241319421|gb|ACQV01000024.1| GENE 188 193481 - 193753 184 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760031|ref|ZP_04758129.1| ## NR: gi|241760031|ref|ZP_04758129.1| putative lipoprotein [Neisseria flavescens SK114] # 1 90 1 90 90 171 100.0 2e-41 MKTYVFPFLSAVFLLAGCTTFSDDGTPAIRKGNDSILSFGKLGSAIEDASAGGWVMLDDQ YTYETFAKKSFPRQPKPKHSFSAVFAPNHS >gi|241319421|gb|ACQV01000024.1| GENE 189 193816 - 193974 103 52 aa, chain - ## HITS:1 COG:NMB1054 KEGG:ns NR:ns ## COG: NMB1054 COG3039 # Protein_GI_number: 15678004 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 52 260 311 311 102 94.0 2e-22 MVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA Prediction of potential genes in microbial genomes Time: Thu May 26 11:53:05 2011 Seq name: gi|241319370|gb|ACQV01000025.1| Neisseria flavescens SK114 ctg1118407793859, whole genome shotgun sequence Length of sequence - 30816 bp Number of predicted genes - 22, with homology - 20 Number of transcription units - 12, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 234 - 277 14.0 1 1 Tu 1 . - CDS 330 - 2951 2978 ## COG0308 Aminopeptidase N - Prom 2980 - 3039 4.1 - Term 3020 - 3068 13.1 2 2 Op 1 . - CDS 3108 - 5417 3408 ## COG5295 Autotransporter adhesin 3 2 Op 2 . - CDS 5468 - 7807 2011 ## Smon_0171 YadA domain protein + Prom 7751 - 7810 3.7 4 3 Op 1 . + CDS 7951 - 8418 495 ## gi|241760177|ref|ZP_04758274.1| transposase 5 3 Op 2 . + CDS 8318 - 8755 75 ## COG2801 Transposase and inactivated derivatives + Term 8927 - 8967 -0.9 - Term 9004 - 9049 8.4 6 4 Op 1 2/0.200 - CDS 9067 - 10080 1668 ## COG0059 Ketol-acid reductoisomerase 7 4 Op 2 2/0.200 - CDS 10142 - 10435 526 ## COG1359 Uncharacterized conserved protein 8 4 Op 3 32/0.000 - CDS 10502 - 10993 962 ## COG0440 Acetolactate synthase, small (regulatory) subunit 9 4 Op 4 . - CDS 11004 - 12731 2696 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 12980 - 13039 10.1 - TRNA 13121 - 13205 78.6 # Leu CAA 0 0 + Prom 13233 - 13292 7.6 10 5 Op 1 2/0.200 + CDS 13490 - 14152 897 ## COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems + Term 14165 - 14211 10.3 11 5 Op 2 1/0.200 + CDS 14236 - 14889 829 ## COG0040 ATP phosphoribosyltransferase 12 5 Op 3 . + CDS 14941 - 15663 553 ## COG0778 Nitroreductase 13 5 Op 4 . + CDS 15735 - 17027 1404 ## COG0141 Histidinol dehydrogenase + Term 17060 - 17091 3.4 - Term 17041 - 17088 8.2 14 6 Tu 1 . - CDS 17136 - 18017 891 ## COG0287 Prephenate dehydrogenase - Prom 18253 - 18312 5.4 + Prom 18217 - 18276 8.7 15 7 Op 1 2/0.200 + CDS 18313 - 18807 685 ## COG1846 Transcriptional regulators 16 7 Op 2 4/0.000 + CDS 18857 - 20263 340 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 20282 - 20321 10.0 + Prom 20326 - 20385 3.6 17 8 Op 1 19/0.000 + CDS 20487 - 21677 1384 ## COG1566 Multidrug resistance efflux pump + Term 21681 - 21740 21.1 18 8 Op 2 . + CDS 21779 - 23305 1451 ## COG0477 Permeases of the major facilitator superfamily + Term 23307 - 23351 14.1 - Term 23298 - 23334 8.0 19 9 Tu 1 . - CDS 23348 - 24265 532 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Prom 24441 - 24500 5.7 + SSU_RRNA 24798 - 26330 99.0 # FJ983092 [D:1..1534] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + TRNA 26437 - 26513 96.8 # Ile GAT 0 0 + TRNA 26519 - 26594 93.7 # Ala TGC 0 0 + LSU_RRNA 27096 - 29830 98.0 # CP001050 [R:1263410..1266299] # 23S ribosomal RNA # Neisseria gonorrhoeae NCCP11945 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + 5S_RRNA 29927 - 30035 98.0 # CP000381 [D:61720..61828] # 5S ribosomal RNA # Neisseria meningitidis 053442 # Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria. + Prom 29786 - 29845 47.1 20 10 Tu 1 . + CDS 30062 - 30241 64 ## + Term 30272 - 30303 -1.0 21 11 Tu 1 . - CDS 30206 - 30361 71 ## - Prom 30386 - 30445 4.4 + Prom 30319 - 30378 3.6 22 12 Tu 1 . + CDS 30413 - 30700 370 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 30742 - 30780 3.3 Predicted protein(s) >gi|241319370|gb|ACQV01000025.1| GENE 1 330 - 2951 2978 873 aa, chain - ## HITS:1 COG:NMB1416 KEGG:ns NR:ns ## COG: NMB1416 COG0308 # Protein_GI_number: 15677275 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Neisseria meningitidis MC58 # 1 871 1 867 867 1480 82.0 0 MSKTIHYLKDYAAPAYRILKTDLHFDILKPQTIVKSSLTVQPERAGEPLVLDGSAKLLSV KVNGRAVDYVLEDEKLTIAGVPSENFTLEVETEILPAENKSLMGLYASGGNLFTQCEPEG FRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFAKPS YLFALVAGDLAVTEDYFTTMSGRKVKIEFYTTETDKPKVGFAVESLKNAMKWDETRFGLE YDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLANSRTATDTDFEGIESVVGHEYFHNWT GNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRVVRRIDNVRMLRLFQFPEDAGPTAHPV RPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAA MADANGINLDQFALWYSQAGTPVLDAQGRLKDGAFELTIKQTIPATPDMADKQPMMIPVK TGLMNEKGEAVEFEYQGKRVKEAVLVLTEAEQTFVLGGVNEPVIPSVLRDFSAPVTLNYP YSEQELATLLAADENEFARWEAAQTLYHRAINANRQALAEGRPLPEHKALMDALALVVSG DFDPAFRAILLQMPSETDVWAEEENIDPIQVHQAREALLNAVAVKFLPQWRELNRQATEQ ENQADAAVRYEYSPELAGWRTLRNACRAFILRADAAHIEHVAENYEAMAQNMTHEWGILS AINSNESEIRDRLLTQFADKFADDALVMDKYFALIASSRRKDTLQQVQTALNHPKFSIEN PNKARSLLMSFSRNIPHFHAEDGSGYRFVADKVMEIDRFNPQVAARLVQAFNICNKLEAN RKAVMTKELQRIHAQEVLSKDVGEIVGKILNEK >gi|241319370|gb|ACQV01000025.1| GENE 2 3108 - 5417 3408 769 aa, chain - ## HITS:1 COG:XF1981 KEGG:ns NR:ns ## COG: XF1981 COG5295 # Protein_GI_number: 15838575 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 42 769 454 1190 1190 129 29.0 2e-29 MTYVDTAGTPATTPSNKVNLVGTGGPVTLGNVAAGAVNATSTDAVNGSQLFATNQNVANN AANIAKGINFGGTTGSKNYALGDTINVKGDSNIISETVAGGAQLKLADVLNVGQAAPVKI DGNKGEVSGLSNTTLGGSDFAQGKRAATEEQLNAAQDQLVNVLGGNAANNGGNISMTDIG GTGENNIHDAIKAVNATANLPLTFGGDSGKDVERKPGTKLNIVGGQTDAAKLSDGNIGVV ANGSDKLEVKLAKDLAVDSVKAGDTTVNTDGVKVGDVNLTKAGLNNGGNKITNVAAGTDD TDAVNVAQLNKAAAAAKTEVVQGDNIVVTQNVGANGQTIYKVATDKNLKVDSVTAGDTVM NNDGVKVGDDVALNKDGLKAGDVNLTKAGLNNGGNKITNVAAGTDDTDAVNVSQLKQAAA ASKTEVVQGKNIVVTEKTGDKGQTVYEVATDKDLDVDSVKAGDTTVNNDGVKVGDDVALN KDGLKAGKVNLTKDGLDNAGNKVTNVADGDINANSKDAVNGSQLYATNQNVANNAATIAK GINFGGTTGSNNYALGSTINVKGDSNIISETVAGGAQLKLADEISVKTVNADTFKAGDTV MNNDGMKVGDKVALNKDGLTAGNTVVNNDGVTIAAPTENNPNNQVKLSPVGLNNGGQRIT NVAPGKDGTDAANVNQLIGLGTELQNNINQVGKKAYAGVAGAIAQGSIPQVTHPGETGIG VGSGYYGGQSAMAIGVSAMSDGGNWIVKGNFSANTDGHVGVGVGALYKW >gi|241319370|gb|ACQV01000025.1| GENE 3 5468 - 7807 2011 779 aa, chain - ## HITS:1 COG:no KEGG:Smon_0171 NR:ns ## KEGG: Smon_0171 # Name: not_defined # Def: YadA domain protein # Organism: S.moniliformis # Pathway: not_defined # 8 443 365 807 1212 115 31.0 6e-24 MNYTYVGDSANSSVTVGNRQIKQVGAGEVSAASTDAINGSQLYATQNVIGNIGKGVATNL GGGAALKPDGTFTAPTYNLTDANGNAVSKNNVGDALNVLDSRLNNVGGGFQVAATTGTTQ NVKPGNTLKFIDGTNTTTEVSTDGAGVTTVKINATGGGAAVPLTSNAATGQVNAPAAADA NKAATAGSVATAINTAVSKSGFNVQGGSVAGGSVTGAATTKVNNGSTVKLQAGKNIALSQ SGADFTFATAENLSVTSVTATDAAGNKTVTNGSGVTITPAAAGSSPVRLTTSGLDNGGNK ITNLTSGNVAAGDNSAVTGGAVNTAINTAINTAVTDLKDAGFKIGADSGADDTVKLGETV KYAGDANIKTTVTNNQIGFKLADSITVGPASGGSPVTVDGTAGTVIGLTNKTWNPAGIVS GRAATEDQLKAVTNQVNSSATHYYSVNDGGGAHGGNFNNDGATGLNALAAGVGASAQDND AVAIGSGTIAQGNGSIAIGAAAEVSGATGAGGIAIGAAATAKNGGTAVGSGADTGNGTAL IPGLPNRLNNNLALGDSARVKNDTNFNVALGSLSTAGDADLTAAAYKPNATSVIAGDINE AGVKYGEVSLGGDTSHFMSGSKMYRRLTNLAAGSADTDAVNVSQLKAVQAALQDQAPVAY TKADGTKVYKHTDGNFYDAPNGAGNQVAAADVITSLQNAAGSTTAPTTLANVKDNLADTA AAVTNPTGNDRTTLSANKGHNAATVNDVLNAASPYKATGLTKILSPMAIPLILLTAKVP >gi|241319370|gb|ACQV01000025.1| GENE 4 7951 - 8418 495 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760177|ref|ZP_04758274.1| ## NR: gi|241760177|ref|ZP_04758274.1| transposase [Neisseria flavescens SK114] # 1 155 1 155 155 269 100.0 4e-71 MQSSLSPERWHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTSTN NRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLDTERLPLLKGQKATGKRV YLFVAIDDFSRELYAAIFAGQNRRQCRQVSDWTPG >gi|241319370|gb|ACQV01000025.1| GENE 5 8318 - 8755 75 145 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 16 136 132 251 263 73 34.0 1e-13 MSPLTISQGSYTPPFLPDKTADSAAKFLTGHLVDPCPYLIECVYSDNGTEYKGSANHAFG VACYENGIGQKFTRVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNFYNT VKPHRSLNGDTPFEVLQAYFSQPVV >gi|241319370|gb|ACQV01000025.1| GENE 6 9067 - 10080 1668 337 aa, chain - ## HITS:1 COG:NMB1574 KEGG:ns NR:ns ## COG: NMB1574 COG0059 # Protein_GI_number: 15677424 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Neisseria meningitidis MC58 # 1 337 1 337 337 574 89.0 1e-164 MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVIGLRQGGSWKKAEAAGH DVRTVAEATKAADVVMILLPDENQPIVYKNEIEPNLKEGAVLAFAHGFNVHYNQIVPRAD LDVIMIAPKGPGHTVRSEFLKGGGVPSLIAVYQDKSGKAKDIALSYATANGGTKGGVIET NFREETETDLFGEQAVLCGGVVELIKTGFETLTEAGYAPEMAYFECLHEMKLIVDLIYEG GIANMNYSISNNAEYGEYVTGVEVINDKSREAMRNALKRIQTGEYAKMFIQEGAVNYASM TARRRLTADHQIEKVGAQLRSMMPWIAKNKLVDQDKN >gi|241319370|gb|ACQV01000025.1| GENE 7 10142 - 10435 526 97 aa, chain - ## HITS:1 COG:NMA1764 KEGG:ns NR:ns ## COG: NMA1764 COG1359 # Protein_GI_number: 15794657 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 97 1 97 97 147 86.0 4e-36 MSSIQIVALVTVKPEYTEALAAQFKELVKASRAEEGNISYDLHQEIGNPNHFVFVESWKS QAAIDEHNASEHFQNFVKSIEGKTEALEIVLMNQVPA >gi|241319370|gb|ACQV01000025.1| GENE 8 10502 - 10993 962 163 aa, chain - ## HITS:1 COG:NMA1765 KEGG:ns NR:ns ## COG: NMA1765 COG0440 # Protein_GI_number: 15794658 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Neisseria meningitidis Z2491 # 1 163 1 163 163 267 96.0 7e-72 MRHILSILMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEHVIEQI TKQLNKLIEVIKVVDLNESRFVERELMLVKVRAVGKDRDEFLRLTEIYRGSVIDVTDRSY TIEITGSTEKLDSFLETVGRAQILETVRTGAAGIGRGERILKI >gi|241319370|gb|ACQV01000025.1| GENE 9 11004 - 12731 2696 575 aa, chain - ## HITS:1 COG:NMB1577 KEGG:ns NR:ns ## COG: NMB1577 COG0028 # Protein_GI_number: 15677427 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Neisseria meningitidis MC58 # 1 570 1 570 575 1069 93.0 0 MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKHILVRHEQAAVHAADAY ARVSGKVGVALVTSGPGVTNALTGIATAYSDSIPLVVISGQVGNSLIGTDAFQEVDTVGI TRPCVKHNFLVTNIAELADTIKKAFQIAASGRPGPVVVDVPKDVTQAMAKFSYPQEDIFI RSYQPVVQGHIGQIKKAVQMLASAKRPIIYFGGGVVLGNASEEMTKFVRMIGAPCTGTLM GLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLAIGARFDDRVISVPSKFFEKAKKII HIDVDPSSIAKRVKVDIPIVGDVKNVLSEMIQLWGKQESAPAADSLDKWWKSIEEWRSRN CLWFDNESEIIKPQYVIQKLAEITNNSAIITSDVGQHQMFTAQYYPFERPRQWLNSGGLG TMGVGLPYAIGAKLAAPDQDVFCITGEGSIQMNIQELSTCFQYRVPVNVVTLNNGYLGMV RQWQELYYGNRESETYFDSLPDFVKLAEAYGHIGIRVDKKSDVEGALLEALNQKDRLVFL DFLTDKKQNVLPMVGNGKGLDEMVLPPHMRETLSA >gi|241319370|gb|ACQV01000025.1| GENE 10 13490 - 14152 897 220 aa, chain + ## HITS:1 COG:NMA1767 KEGG:ns NR:ns ## COG: NMA1767 COG1999 # Protein_GI_number: 15794660 # Func_class: R General function prediction only # Function: Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems # Organism: Neisseria meningitidis Z2491 # 1 220 1 217 217 342 82.0 4e-94 MLSVTRTFLLSAFALAALAACQPKEEAKEASSTPAASAAPAASGESAPKVQARGTDMRKE DIGGDFTLTDGDGKPFSLSDLKGKVVILSFGYTHCPDVCPTELLTYSDTLKQLGDQAKDV KVVFVSIDPERDTPEVIGKYAKQFNPDFIGLTATGDQSLPVIKQQYRVVSAKVNQKEDSE NYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVKTLL >gi|241319370|gb|ACQV01000025.1| GENE 11 14236 - 14889 829 217 aa, chain + ## HITS:1 COG:NMA1768 KEGG:ns NR:ns ## COG: NMA1768 COG0040 # Protein_GI_number: 15794661 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 216 1 216 217 364 88.0 1e-101 MTDTLLTIALSKGRIFEETLPLLAAAGIVPAEEPEKSRKLIIGTNHDNIRLVIVRATDVP TYVQYGAADFGIAGKDVLIEHGGDGLYQPLDLHIASCRMMVAVKKGFDYAAASKPGSRLR IATKYPDIAAEHFADKGVHVDIIKLYGSMELAPLVGLSDAIVDLVSSGNTLKANGLEAVE HVADISSRLVVNKAALKTKYALLNPIIQAFENAAKAV >gi|241319370|gb|ACQV01000025.1| GENE 12 14941 - 15663 553 240 aa, chain + ## HITS:1 COG:VC0715 KEGG:ns NR:ns ## COG: VC0715 COG0778 # Protein_GI_number: 15640734 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Vibrio cholerae # 5 237 3 237 240 229 50.0 3e-60 MQSKPTLDTILSHRSIRRFTSEPIADEILDTLVRAGQQASTSNNLQCVSIIRVSDLALRQ GIHEAAGSAPYIVHCAEFLLFCIDFSKHKAMFPDAQIDWAEVTLIGAVDAGIMAQNVLLA AESLGLGGVYIGALRNDAQKVSDVLNLPDYCVPLVGLCLGYPDQDPPLKPRLPKEMVYAE NACPSLNADAVEAYNQAVADYYELRKGRPIPWKESLAKTLGNPVRPHMLAFLQKKGFLKR >gi|241319370|gb|ACQV01000025.1| GENE 13 15735 - 17027 1404 430 aa, chain + ## HITS:1 COG:NMA1770 KEGG:ns NR:ns ## COG: NMA1770 COG0141 # Protein_GI_number: 15794663 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 429 1 429 429 769 91.0 0 MKKLDTQSPDFQAELKALLAFETAQNPEIDRIVADICADVQKRGDAALIEYTNRFDGTSA QTIDDLILTQDDLQSAFERLPENIQTALKTAARRVESYHKHQKMESWTYEDEDGTLLGQQ IMPLDRVGIYVPGGKAAYPSSVIMNAIPAHVAGVKEIIMVVPTPKGERNDIVLAAAFVAG VTKVFTVGGAQAVAALAYGTESVLQVDKITGPGNAFVAAAKRRVFGVVGIDMVAGPSEIL VIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQTYLDEVQTAMNRLIETMPRRAIIEA SLGNRGAMILAKDLDEACEIANYISPEHLELSVENPQEWAKKIRHAGAIFMGRYTSESLG DYCAGPNHVLPTSRTARFSSPLGTYDFQKRSSLIQVSEQGAQKLGKTASVLAHGESLTAH ARAAEFRLKD >gi|241319370|gb|ACQV01000025.1| GENE 14 17136 - 18017 891 293 aa, chain - ## HITS:1 COG:NMB0440 KEGG:ns NR:ns ## COG: NMB0440 COG0287 # Protein_GI_number: 15676352 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Neisseria meningitidis MC58 # 9 290 6 287 290 355 60.0 8e-98 MNTSAFFPHITLIGVGLIGGSFMLDLKRLGLVQTVTGIDTNADNLNYALECGIIDHAYPN ICAESISNADLVLIATPVSVLPDVCRDIKPFLKDTACVSDVGSTKQSALNAFRTHLSDRL PQCFAAHPIAGSDQSGAKSARCGLFQNSRLIITPHGQEASDGLRRLKSLWQAVGSQISTM SAEEHDNIFAAVSHLPHLAAFAYVHALVDHPHGKDYLPYAATGFRDFTRIASSHPAVWTD ICMANRPALLKLTSDLKEQLSKLEQLLSDGNKTELYRYFEEAAQMRNDWLKNR >gi|241319370|gb|ACQV01000025.1| GENE 15 18313 - 18807 685 164 aa, chain + ## HITS:1 COG:STM2813 KEGG:ns NR:ns ## COG: STM2813 COG1846 # Protein_GI_number: 16766124 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 162 1 162 176 94 35.0 1e-19 MSFSQTELVNAMRLLSTRLPQFPEQQNQVSRMLRIVTERLSSHLNENLKAFGINENLWFS LMAVYVSPNSEILPSRLSDLMDLTRTSATRLSDDMVGRGWVERYINQKDRRQIVLKLTLS GETFIHEVWPQIARQSGQAWEDFTKEDYDTLQHLLGKLLNRLGN >gi|241319370|gb|ACQV01000025.1| GENE 16 18857 - 20263 340 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 48 467 42 460 460 135 26 3e-31 MKLGLVKSSVCVAAVSLLAACAPFGKQSPLDETTAYPLPQGQSAATAQDGWWMKLKDKKL NNLIASAIQTSTNLRVVKARFEQAQAQLGVVGAANKPQLGLGVTGIGTYVSPKPQAGMVD TDHTLVLAHAALQGSLVFDFWGKNREQIQAVLGKSRAAVYEAHHIRTELAHAVTAQYFAW QMATEQLALLDTRIELADKALKLMQQRVKAQLAPADALHALEMAQQQLQLEKSAWTQKNE KIRNSLAVLTGRVPGALNGQVPEKMAAVPSLPVSRIEADLLAARPDIAAQKALLEEKWHI VKSTEAEFYPNIELKVLAGMTHIDAFNLIRGRTSGMLGIVPALNLPLFTSGALQSKLAGK RAQYNEQVAVYDQTVLNAMRSAADAVVDYQSLKSRQDTWNKMVNIADKSVQNAKGRVRAG LDNGLTALQKQDEAARTKMSAVQYHAEYLTAWSDLNAQLGGGFQLNKK >gi|241319370|gb|ACQV01000025.1| GENE 17 20487 - 21677 1384 396 aa, chain + ## HITS:1 COG:NMA2169 KEGG:ns NR:ns ## COG: NMA2169 COG1566 # Protein_GI_number: 15795040 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Neisseria meningitidis Z2491 # 50 395 52 393 394 395 67.0 1e-109 MDTQSEKNNVQKEPEVAASGAKTHRKRNLVIVTLLFLIAAAGVALAYFLFWQHEEETEDA YVAGHLVMITPQVNGTVRKVMYDDTDVVKKGDVLVALDDSDFQLAYDRAQNELIQAIRQN KQQAAVNSKAKAQVLLRKADLARVQADLRRRESLAGTEAVSGEELSHARAAVVQAQAAVK AVEAEEVSAQVALGNNIPLRQQPAVQTAISHIKDAWLNLQRTQIRSPISGQIAKRNVQVG QRIAQGTPMMAVVPLSELWVDANFKESQLRKMKIGQPVEMTADLYGSKVVYHGKVMGLSA GTGSAFSLLPAQNATGNWIKVVQRVPVRISLDAKELQQNPLRVGLSMTVKVDIAEKGSGK AMTAEAERNTALPETESVDWKAADALVDKIFEQYAK >gi|241319370|gb|ACQV01000025.1| GENE 18 21779 - 23305 1451 508 aa, chain + ## HITS:1 COG:NMA2168 KEGG:ns NR:ns ## COG: NMA2168 COG0477 # Protein_GI_number: 15795039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 508 9 516 516 766 78.0 0 MNYPPLQGFKLVLATLALSLAVFMEVLDSTIANVAVPVIAGDLGAATTQGTWVITSFAVA NAISVPLTGFLAKRFGEVKIFIAAVIGFVVTSWLCGIAHNLQALVFFRVLQGFIAGPLIP LSQSLLMASYPPEKRTLALALWAMTVVVAPVLGPILGGWISDNWHWGWIFFINIPIGVLS ATIAWKQLRHRETEIVRAPIDYVGLVLMIVGIGALQMMLDRGKELDWFASGEIIVLGVTA LVFITYFIVWELGEKYPIVDLSLFKNRNFTIGVVATSLGFMVYMGTLTLLPLVLQSNLGY TATWAGLAAAPVGFLPIILSPIIGKFGNRVDMRLFVSASFLVFAYTFHWRTDFYAGMDMS NVVWPQFWQGLGVAMFFLPLTSITLSHMKGNQIASASSLSNFLRVFMGGVGVSVVSTMWE RREALHHTQLTEHVNLLSSISNQSIQGMMANGLSKEQALEAINSTISQQGFIIGSNEIFL AGSIIFISMIPIIWLARPPFSGSGGGGH >gi|241319370|gb|ACQV01000025.1| GENE 19 23348 - 24265 532 305 aa, chain - ## HITS:1 COG:NMA0411 KEGG:ns NR:ns ## COG: NMA0411 COG2334 # Protein_GI_number: 15793416 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Neisseria meningitidis Z2491 # 1 304 3 306 307 523 81.0 1e-148 MSVYTSVSDAQMRDFLLQYDLGDFVSLQGIAQGITNSNYFLTTSTGRYVLTVFEVLKSEE LPFFLELNQHLSLNGVACAAPIARKDGGLHSILAGKPACLVTCLNGSDTGWPTEAQCFHT GAMLAKMHLAGQDFPLKMKNPRYDDWWHDACTQLLPVLDSEDAALLQSEIAALDENLGEH LPSGTIHADLFKDNVLLNGDEVSGFIDFYYACNGNFMYDLAIAVNDWARTADNKLDPVLY DAFIHGYESVRPLSDEERAYFPTAQRAGCIRFWVSRLLDFHFPQSGEMTFIKDPNAFRDL LLSLK >gi|241319370|gb|ACQV01000025.1| GENE 20 30062 - 30241 64 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGAFYMPVGSIGLAIGDGVRGARILMNRYLLSVRAFLVFGLCMITLLLFLNKSTESYG >gi|241319370|gb|ACQV01000025.1| GENE 21 30206 - 30361 71 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLFQAVNTVTYADRATAHTHINAYAILTQISFDFKYSKQLTVTFSTFVQE >gi|241319370|gb|ACQV01000025.1| GENE 22 30413 - 30700 370 95 aa, chain + ## HITS:1 COG:NMB1657 KEGG:ns NR:ns ## COG: NMB1657 COG1555 # Protein_GI_number: 15677506 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 1 81 107 187 205 94 66.0 5e-20 MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEE LKNVKGIGDAVLNKLKAEATVSSAAPKAAQPAVKK Prediction of potential genes in microbial genomes Time: Thu May 26 11:53:53 2011 Seq name: gi|241319308|gb|ACQV01000026.1| Neisseria flavescens SK114 ctg1118407793855, whole genome shotgun sequence Length of sequence - 55168 bp Number of predicted genes - 51, with homology - 51 Number of transcription units - 23, operones - 13 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 1606 - 1649 10.0 2 2 Tu 1 . - CDS 1681 - 4311 3975 ## COG0495 Leucyl-tRNA synthetase - Prom 4352 - 4411 5.5 - Term 4454 - 4497 10.0 3 3 Tu 1 . - CDS 4512 - 4847 420 ## HSM_0579 hypothetical protein - Prom 4893 - 4952 3.4 + Prom 4816 - 4875 4.9 4 4 Tu 1 . + CDS 5049 - 6200 1535 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 6208 - 6271 18.4 + Prom 6246 - 6305 5.4 5 5 Op 1 . + CDS 6498 - 7076 655 ## COG2119 Predicted membrane protein 6 5 Op 2 . + CDS 7078 - 7728 210 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Term 7759 - 7813 12.0 - Term 7746 - 7801 12.2 7 6 Tu 1 . - CDS 7810 - 8736 1375 ## COG0583 Transcriptional regulator - Prom 8763 - 8822 3.8 + Prom 8821 - 8880 7.0 8 7 Tu 1 . + CDS 8912 - 9661 817 ## COG0327 Uncharacterized conserved protein + Prom 9682 - 9741 5.5 9 8 Op 1 28/0.000 + CDS 9784 - 10365 643 ## COG0723 Rieske Fe-S protein 10 8 Op 2 16/0.000 + CDS 10384 - 11733 2026 ## COG1290 Cytochrome b subunit of the bc complex 11 8 Op 3 4/0.000 + CDS 11748 - 12533 1005 ## COG2857 Cytochrome c1 + Term 12551 - 12586 7.1 + Prom 12633 - 12692 6.0 12 9 Op 1 13/0.000 + CDS 12747 - 13352 360 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase 13 9 Op 2 . + CDS 13442 - 13768 461 ## COG2969 Stringent starvation protein B + Term 13777 - 13823 12.6 - TRNA 13909 - 13984 90.1 # Ala GGC 0 0 - TRNA 13991 - 14067 87.8 # Met CAT 0 0 14 10 Tu 1 . - CDS 14174 - 15325 1168 ## COG1565 Uncharacterized conserved protein - Prom 15471 - 15530 7.1 + Prom 15461 - 15520 6.2 15 11 Op 1 29/0.000 + CDS 15728 - 16183 635 ## COG2001 Uncharacterized protein conserved in bacteria 16 11 Op 2 2/0.333 + CDS 16180 - 17142 443 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 17 11 Op 3 2/0.333 + CDS 17206 - 17469 260 ## COG3117 Uncharacterized protein conserved in bacteria 18 12 Op 1 26/0.000 + CDS 17578 - 19296 2446 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 19 12 Op 2 . + CDS 19323 - 20801 1717 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase + Prom 20818 - 20877 2.6 20 13 Op 1 . + CDS 20982 - 21503 474 ## COG0739 Membrane proteins related to metalloendopeptidases 21 13 Op 2 . + CDS 21528 - 22388 720 ## Hore_13500 hypothetical protein 22 13 Op 3 . + CDS 22429 - 23160 89 ## CGSHiEE_00205 glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) 23 13 Op 4 . + CDS 23211 - 24575 1323 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 24 13 Op 5 . + CDS 24592 - 24741 145 ## NMB0417 hypothetical protein 25 14 Tu 1 . + CDS 24843 - 25925 1470 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Term 25935 - 25972 9.1 + Prom 25952 - 26011 2.8 26 15 Op 1 . + CDS 26041 - 26520 760 ## COG2346 Truncated hemoglobins 27 15 Op 2 . + CDS 26575 - 27183 872 ## gi|241760227|ref|ZP_04758323.1| hypothetical protein NEIFL0001_0110 + Term 27214 - 27258 3.0 + Prom 27492 - 27551 5.0 28 16 Op 1 . + CDS 27681 - 28172 227 ## gi|241760202|ref|ZP_04758298.1| hypothetical protein NEIFL0001_0111 29 16 Op 2 . + CDS 28195 - 29268 460 ## gi|241760199|ref|ZP_04758295.1| hypothetical protein NEIFL0001_0112 30 16 Op 3 . + CDS 29293 - 29817 189 ## XCV1302 hypothetical protein 31 16 Op 4 . + CDS 29852 - 31189 1702 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 32 16 Op 5 . + CDS 31203 - 31763 660 ## COG3034 Uncharacterized protein conserved in bacteria + Term 31787 - 31834 7.5 + Prom 31791 - 31850 1.6 33 17 Tu 1 . + CDS 31966 - 33462 1726 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 33516 - 33563 13.4 + Prom 33598 - 33657 6.7 34 18 Op 1 31/0.000 + CDS 33752 - 34996 1331 ## COG0772 Bacterial cell division membrane protein 35 18 Op 2 . + CDS 35001 - 36068 1306 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase + Term 36093 - 36145 9.4 + Prom 36118 - 36177 3.9 36 19 Tu 1 . + CDS 36203 - 37030 762 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis + Term 37038 - 37082 12.5 + Prom 37203 - 37262 5.9 37 20 Op 1 11/0.000 + CDS 37296 - 38705 1932 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 38738 - 38776 8.6 38 20 Op 2 18/0.000 + CDS 38793 - 39707 927 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 39 20 Op 3 25/0.000 + CDS 39697 - 40416 357 ## COG1589 Cell division septal protein 40 20 Op 4 35/0.000 + CDS 40491 - 41738 1554 ## COG0849 Actin-like ATPase involved in cell division + Term 41747 - 41794 11.0 + Prom 41793 - 41852 6.7 41 20 Op 5 . + CDS 41991 - 43190 1599 ## COG0206 Cell division GTPase + Term 43205 - 43246 8.4 - Term 43238 - 43286 16.1 42 21 Op 1 6/0.000 - CDS 43312 - 44280 441 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 43 21 Op 2 1/0.333 - CDS 44294 - 44800 527 ## COG0597 Lipoprotein signal peptidase - Prom 44825 - 44884 3.1 - Term 44886 - 44930 5.0 44 22 Op 1 . - CDS 44949 - 45848 1373 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 45 22 Op 2 5/0.000 - CDS 45930 - 46112 217 ## COG3024 Uncharacterized protein conserved in bacteria 46 22 Op 3 7/0.000 - CDS 46109 - 46729 517 ## COG0237 Dephospho-CoA kinase 47 22 Op 4 7/0.000 - CDS 46729 - 47616 823 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 48 22 Op 5 24/0.000 - CDS 47618 - 48859 1483 ## COG1459 Type II secretory pathway, component PulF - Term 48872 - 48913 2.2 49 22 Op 6 . - CDS 48939 - 50618 2058 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 50768 - 50827 7.4 - Term 50939 - 50999 15.4 50 23 Op 1 . - CDS 51022 - 54237 4558 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 51 23 Op 2 . - CDS 54244 - 54840 150 ## gi|241760231|ref|ZP_04758327.1| hypothetical protein NEIFL0001_0136 - Prom 54867 - 54926 2.7 Predicted protein(s) >gi|241319308|gb|ACQV01000026.1| GENE 1 3 - 1418 1909 471 aa, chain + ## HITS:1 COG:PM1453_2 KEGG:ns NR:ns ## COG: PM1453_2 COG1454 # Protein_GI_number: 15603318 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Pasteurella multocida # 61 470 1 408 414 685 78.0 0 RAKALRVIWNSPSTFGGIGDVYNAFLPSLTLGCGSYGKNAVGGNVSAVNLLNIKKVGRRR NNMQWFKVPAKIYFERDSIQYLQDIKDCEKVMIVTDRSMVDLGFVDKITHQLHQRKNKVT IQLFTDVEADPSVQTVYKGTDLMRSFQPDTIIALGGGSPMDAAKAMWLFYEQPQVDFEDL VQKFMDIRKRAFRFPELGRKAKFIGIPTTSGTGSEVTPFTVISDGDKKYPIADYSLPPTI AIVDPAFTMTVPAGVTADTGLDVLTHAVEAYVSVLANDFTDGLALQAIKLVFQYLERSYK HGAADPEAREHMHNASTIAGMAFSNAFLGINHSMAHKIGGKYHVLHGRANAILLPHVIRY NGTRPQKTATWPKYNYYKADLKYQEIARTLGLPCATPAEGVESFARACHELAVNVGIKMS FKEQGIDEKTFIDGRKELAMLSFEDQCTPANLRLAMVADMEEILTKAYYGE >gi|241319308|gb|ACQV01000026.1| GENE 2 1681 - 4311 3975 876 aa, chain - ## HITS:1 COG:NMB1897 KEGG:ns NR:ns ## COG: NMB1897 COG0495 # Protein_GI_number: 15677729 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 876 1 876 876 1733 96.0 0 MQEQYQPAAIEPAAQKKWEDERIFNVSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGD VLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGFAID WEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDPVDQTVLANEQVIDGRGWRSG ALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKTMQRNWIGKSRGMTVRFAVSDDS KQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPLATAAAADKPELQAFIAECKAGSVA EADMATMEKKGVPTGRYVVNPLNGDKLEVWIANYVLWGYGDGAVMAVPAHDERDFEFATK YNLPKKQVIAVGDNAFDANQWQEWYADKENGVLVNSGDLDGMNFQTAFDAIAAKLQSQDA GEPKTQYRLRDWGISRQRYWGCPIPIVHCEKCGDVPVPADQLPVVLPENVVPDGMGSPLA KMPEFYETTCPCCGGAAKRETDTMDTFMESSWYFFRYMSPKFAEGMVSAEAAKYWGAVDQ YIGGIEHAILHLLYARFFTKLMRDEGLVNVDEPFERLLTQGMVVCETYYRENDKGGKDWI NPADVELTFDDKGRPVSAVLKADGLPVVISGTEKMSKSKNNGVDPQELINAYGADTARLF MMFAAPPEQSLEWSDSGVEGAHRFLRRLWRTVYEYLKQGEAVKAFAGNQDGLSKELKDLR HKLHSTIAKVSDEYGRRQQFNTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLETAVRLLW PIVPHICETLWSELNGVKLWEAGWPTVDDAALVKSEIEVMVQVNGKLRGKITVAADASKA DLEAAALANEGAVKFMEGKPAKKIIVVPGRLVNIVV >gi|241319308|gb|ACQV01000026.1| GENE 3 4512 - 4847 420 111 aa, chain - ## HITS:1 COG:no KEGG:HSM_0579 NR:ns ## KEGG: HSM_0579 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus_2336 # Pathway: not_defined # 59 110 42 93 94 65 51.0 7e-10 MMKKTASFLCLMLMAAAVQAAPSDSERIAALERQVAELTAQVNRLLSERLDERSARRNNE VHVCALSAFTDTFRTENVNRGRARLDVIQQCRRQHAEMFCKEEAVRCQTYR >gi|241319308|gb|ACQV01000026.1| GENE 4 5049 - 6200 1535 383 aa, chain + ## HITS:1 COG:NMA0209 KEGG:ns NR:ns ## COG: NMA0209 COG0484 # Protein_GI_number: 15793233 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Neisseria meningitidis Z2491 # 1 372 1 368 373 565 80.0 1e-161 MSTQDYYETLGVARSASDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYDTLSDK EKRTMYDQYGHAAFEQGAGAGGFGGFGGFGGAQGFDFSDIFSQMFGGGGSAGGRQPDYSG ADLQVGIEISLEEAAKGVKKRINIPTYEECDVCHGSGAKPGTSASTCSTCHGSGTVHVRQ AIFQMQQTCPTCHGTGKEIKDPCVKCRGEGRTKTSKTVEVNIPAGIDDGQRIRLSGEGEP GQHGAPAGDLYVNVRVRQHKIFERNGLDLHCELPISFAIAALGGEVEVPTLDGKVKLHIP KETQTGRRMRVKGKGIKSLRSSSTGDLYCHILVETPVNLTDRQKELLEEFEKISSGLNLS QTPRKKSFWEKVGEKVGDLFSDN >gi|241319308|gb|ACQV01000026.1| GENE 5 6498 - 7076 655 192 aa, chain + ## HITS:1 COG:CC2370 KEGG:ns NR:ns ## COG: CC2370 COG2119 # Protein_GI_number: 16126609 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Caulobacter vibrioides # 1 179 17 196 207 156 52.0 2e-38 MEAFFSSTLGVAIAEIGDKTQLLALFLAARFAHKNAIVAGIFIATLLNHLVSAALGVWLA SAISPEVMKWLVGGSFIAVGLWLLLPDKDEDPDGNWLKYGAFTATVVLFFLAEIGDKTQI ATVLLAAKYQSILLVVVGSIAGLMIASVPAVYLGEMLMRKIPAKAVRIAACILFCLLGIL TLLGDGIVLKAV >gi|241319308|gb|ACQV01000026.1| GENE 6 7078 - 7728 210 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 4 202 83 286 287 85 30 6e-16 MWDIVFEHKDFVVINKPCGVSVHSELEEDVCLTASLTQQLGVERVWLVHRLDKATSGLLL FALNRDSAAALSAQFAEKTVRKTYLALGTHKPAKKQGWVKGGMARSWRGTWKLTRDEDNF AVTRFSSQSLQPGLRLFVLQPFTGKTHQLRVAIKSIGSPILGDTLYGGDEAEHLFLHAWR LVFDYRGEHFDIRVAPDKTWPSEIDLSACLGSDESE >gi|241319308|gb|ACQV01000026.1| GENE 7 7810 - 8736 1375 308 aa, chain - ## HITS:1 COG:NMA0381 KEGG:ns NR:ns ## COG: NMA0381 COG0583 # Protein_GI_number: 15793389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 307 1 307 309 548 87.0 1e-156 MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRSLENYYETPLFERKSTPLR FTPAGMRLLQLARELLPQVAAAERDLVRIIEGEAGELRLAVECHTCFDWLMPAMGEFRPL WPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEPLNGISYRPLFAYEMVGICAEDHPLA DKDVWEAEDFIDETLITYPVPDEMLDLPKKVLLPKGINPPRRHSELTIAIIQLVASKRGI AALPYWTVMPYLEKGYVVHRKITSDGLQSKLYAAIRTEDANKGYLDNFCQITHDRCFADL PGLNELEM >gi|241319308|gb|ACQV01000026.1| GENE 8 8912 - 9661 817 249 aa, chain + ## HITS:1 COG:NMA0382 KEGG:ns NR:ns ## COG: NMA0382 COG0327 # Protein_GI_number: 15793390 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 249 1 249 249 393 76.0 1e-109 MALRREILAWCDETLQVGLFKDYAPNGLQVEGKEEIAKIATSVTASKAAIDFVVEQGADL LLVHHGMFWKSEPVTITGWKKARIETLLHHQINMAGYHLPLDAHPQLGNNAQLAEKLDWA LEKQFGEQNLLNTGRLKTTQTLAQLSERIEAVFGRKPTVIGDFEREIKRIAWCSGGAQGF FQTAVDEGVDAYLTGEISEAQYHLANETGVAFISAGHHATERYGVRALGDAVAEKFGIEV VHFDENNPA >gi|241319308|gb|ACQV01000026.1| GENE 9 9784 - 10365 643 193 aa, chain + ## HITS:1 COG:NMA0383 KEGG:ns NR:ns ## COG: NMA0383 COG0723 # Protein_GI_number: 15793391 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Neisseria meningitidis Z2491 # 1 193 1 193 193 373 92.0 1e-103 MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKAAGAAVEVDVSKIEAG QMLTAEWQGKPIWLVNRTDQQLKDLKSLDGAVTDPNSEVDQQPEYAKNEHRSIKPNLLVA IGICTHLGCSPTYRPDIAPADLGADWKGGFFCPCHGSKFDIAGRVYKGVPAPTNLVVPPY KYLSDTTVLVGED >gi|241319308|gb|ACQV01000026.1| GENE 10 10384 - 11733 2026 449 aa, chain + ## HITS:1 COG:NMA0384 KEGG:ns NR:ns ## COG: NMA0384 COG1290 # Protein_GI_number: 15793392 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Neisseria meningitidis Z2491 # 1 449 1 449 449 821 97.0 0 MANQTNSKAKALLGWMDDRFPLSKMWNEHLAQYYAPKNFNFWYYFGSLALLVLVIQIVSG IFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMHSTGASFFFIVVYLHMFRG LIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMSFWGAQVIINLFSAIPVIGPD LSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKKNKD ENGIPRDGIPFHPYYTVKDILGVVVFLIVFCSVLFFAPEGGGYFLEAPNFDAANALKTPP HIAPVWYFTPFYAILRAIPSFAGTQVWGVIGMGAAVVLIALLPWLDKGEVKSVRYRGPIF KTALVLFIIAFIGLGILGAMVATDTRTLVARVLSFVYFAFFLGMPFYTKLDTNKPVPERV TMSTTKQKIMFFVYVGITVVGAYLFATNI >gi|241319308|gb|ACQV01000026.1| GENE 11 11748 - 12533 1005 261 aa, chain + ## HITS:1 COG:NMB2051 KEGG:ns NR:ns ## COG: NMB2051 COG2857 # Protein_GI_number: 15677873 # Func_class: C Energy production and conversion # Function: Cytochrome c1 # Organism: Neisseria meningitidis MC58 # 1 261 6 266 266 499 90.0 1e-141 MKQTLKNWFAALLLAVPMSAAVASGGGHYEKVDIDLRDQVSLQHGAQIFTNYCLSCHSAS GMRFNRLKDIGLTEDEIKKNLMFTTDNVGDVMVAAMDPKDASKWLGAPPPDLTLIARSKG ADYLYAYMRGFYKDPTRPTGWNNTVLAGASMPHPLWEQQGVQAVELDAKGQPVMIKDEHG NLTPKLYWESTGLQSRRLPNGKVIQKEYDTYVRDLVNYLVYMGEPAQLQRHRIGYMVLAF LFAVMLPLAYFLKKEFWKDVH >gi|241319308|gb|ACQV01000026.1| GENE 12 12747 - 13352 360 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 195 10 203 212 143 37 2e-33 MMTLYSGITCPFSQRCRFVLYEKGMDFEIKDVDVFNKPEDLALMNPYNQVPVLVERDLIL HESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELFSLVQVLENPESTNKEQAK AREAIGNGLTLLAPSFAKNKYILGDDFSMIDVALSPLLWRLDYYDIKLGKSAAPLLKYAE RIFQREAFIEALTPAEKAMRR >gi|241319308|gb|ACQV01000026.1| GENE 13 13442 - 13768 461 108 aa, chain + ## HITS:1 COG:NMA0499 KEGG:ns NR:ns ## COG: NMA0499 COG2969 # Protein_GI_number: 15793498 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Neisseria meningitidis Z2491 # 1 108 27 130 130 149 64.0 9e-37 MAWVNEHTRVPMQYVRDNEIVLNIGPTASHNLNIDNEWVNFSARFSGVAHEIWIPVGHIV SIFGRESGEGMGFEVEPYQPASVEAAEAEDKKAESAEDKPKKVLKLVK >gi|241319308|gb|ACQV01000026.1| GENE 14 14174 - 15325 1168 383 aa, chain - ## HITS:1 COG:NMA2076 KEGG:ns NR:ns ## COG: NMA2076 COG1565 # Protein_GI_number: 15794952 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 5 383 26 405 405 518 69.0 1e-147 MKPQLPLPSTDAQASSAHLTKLIKNEIEQHQNWISFSRFMELALYTPQYGYYSGGSHKIG TDGDFITGPTLTPLFGQTLAKQLAELLPQTAGNIYEFGAGTGHLAATLLQNLSDGLNHYY IIELSAELAERQRQHIIEHTSPEAAAKVIHLTALPEHFDGIIIGNEVLDAMPVERLIYQE ERFQQIGVSLENDGLIEAIRPLAQAELTQTAALYFPPLPSYTSELHPAQYAFIQTLAAKL QRGGMIFIDYGFDAAQYYHPQRKEGTFIGHYRHHTIHDPFFNIGLTDLTAHVNFTDIARA STESGLDLIGYLPQSYFLLNLGITDLLAQIGSPDSVEYIQAASAVQKLIHQHEMGELFKV IAFGKDIDIDWTGFSHGDICHKL >gi|241319308|gb|ACQV01000026.1| GENE 15 15728 - 16183 635 151 aa, chain + ## HITS:1 COG:NMA2075 KEGG:ns NR:ns ## COG: NMA2075 COG2001 # Protein_GI_number: 15794951 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 151 1 151 151 228 78.0 4e-60 MFGGAHELSMDGKGRLAIPAKFRDILLRRYTPAIVVTLDSRKKLLMYPEPVWEEKAEQIL KLKVAGNESLQRYQNLLLHNAEILEWDSAGRVLIPANLRKRVDFEKEVTLVGRANRMELW GREHWEEEMNQALDIDPDELAFQLSQTDLQL >gi|241319308|gb|ACQV01000026.1| GENE 16 16180 - 17142 443 320 aa, chain + ## HITS:1 COG:NMA2074 KEGG:ns NR:ns ## COG: NMA2074 COG0275 # Protein_GI_number: 15794950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Neisseria meningitidis Z2491 # 1 314 1 314 328 516 85.0 1e-146 MSKVENYQHVTVLLHEAVDALAIRKDGIYVDGTFGRGGHSRLILSRLSEQGRLVVFDKDP EAIAVANELAKQDKRVSVVHNGFETFQTALDELGIDKIDGALFDLGISSPQIDDGSRGFS FRFDAPLDMRMDPTRGMSAAEWIATASEQDLHEVIKNYGEERFSRQIARAIVAQREESPI DTTRKLAQLVAQNVRTRERGQDPATRTFQAVRIFINRELEEVEAVLPQVAGRLKEGGRLA VIAFHSLEDRIVKQFIKKYSQHAPLPRWAVVKEADLPQPPLKAVGKAIKPGSTETEANPR ARSAVLRVAERSSGEFLVIE >gi|241319308|gb|ACQV01000026.1| GENE 17 17206 - 17469 260 87 aa, chain + ## HITS:1 COG:NMA2073 KEGG:ns NR:ns ## COG: NMA2073 COG3117 # Protein_GI_number: 15794949 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 87 3 89 89 90 62.0 8e-19 MGKLNILLLVLVTVSAFAVVFKQNQSRLHFIELDKAQKREIQLEQDYARLKLEQARLANH KLIKVAAEKQHLLPPGAHNTAMLERKK >gi|241319308|gb|ACQV01000026.1| GENE 18 17578 - 19296 2446 572 aa, chain + ## HITS:1 COG:NMA2072 KEGG:ns NR:ns ## COG: NMA2072 COG0768 # Protein_GI_number: 15794948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Neisseria meningitidis Z2491 # 1 572 11 581 581 887 77.0 0 MLSGTTKTKKPLTSNGRIGLVLGAVALAFTGLLVRGVYLQTSQHEFLKNQGDQRFVRTLP LPASRGMITDRNGATLALSAPTESLYAMPSGMEEMPTAEQLEKLSAFADVPVEVLKNKLS KKDKGFIYLKRQLSYEKAEEIKALGIKGIAFQKELKRHYPMGNLFAHVIGFTNIDGKGQE GLELSREDSLRGEDGAKVVLRDNKGNIVDSLDSPRNSVPKNGQDMILSLDQRIQTLAYDE LNKAVAYHKAKAGAVVVLDAQTGEILALVNSPAYDPNQPGQANSEQRRNRAVTDMIEPGS AMKPFTIAKALDSGKVDATDTFNTLPYKIGPATVQDTHVYPTLDVRGIMQKSSNVGTSKL SAMFTPKEMYDFYHDLGVGVRMHSGFPGETAGLLRSWRRWQKIEQATMSFGYGLQLSLLQ LARAYTVLTHDGELLPVSFEKQAVAPKGKRVIKASTAKKVRELMVSVTEAGGTGTAGAVD GFDVGAKTGTARKLVNGRYVDNKHVGTFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVAG PVFKEVMSGSLNILGVSPTKPLSNTATVKVPS >gi|241319308|gb|ACQV01000026.1| GENE 19 19323 - 20801 1717 492 aa, chain + ## HITS:1 COG:NMA2071 KEGG:ns NR:ns ## COG: NMA2071 COG0769 # Protein_GI_number: 15794947 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Neisseria meningitidis Z2491 # 1 491 1 491 492 939 91.0 0 MFSKLTPLAETNFPPLLCENAAGRLLHSDSRQIKQGDIFVACQGEYTDGRSYIPAAIANG ATFVFWDDDGKFTWNPEWNVPNQGIKDLKHRAGMLAAQVYGNVSDGLKVWGVTGTNGKTS ITQWLAQAADLLGEKTTIIGTVGNGFWGALEETTHTTPAPVDVQTLLYRFRQQGATAAAM EVSSHGLDQSRVNGVPFCSAIFTNLTRDHLDYHGTMEAYGAIKSRLFYWHGLQHAIINVD DEYGAELVGRLKKDCPDLAVYGYGFSEQADICITDFTASSDGMEAVFQTPWGEGKCRTRL LGRFNAQNLAACVALLCANGYPLNNVLEVLAKIRPASGRMDCIMNSGKPLVVVDYAHTPD ALEKALSTLQEIKPQSAALWCVFGCGGNRDRGKRPLMGAAAVQGADKVVVTSDNPRLENP QDIINDILPAVPAPEYVEADRAAAIRYAVERAATNDIILIAGKGHENYQDVQGVKHHFSD FEIAEKALAERG >gi|241319308|gb|ACQV01000026.1| GENE 20 20982 - 21503 474 173 aa, chain + ## HITS:1 COG:DR0598 KEGG:ns NR:ns ## COG: DR0598 COG0739 # Protein_GI_number: 15805625 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Deinococcus radiodurans # 2 173 22 196 197 155 46.0 5e-38 MLKMPIKTLLISAAVVLFAGCTTKQLPRPTAEIEQLRAQQPPVEQSLPNPVKGKRFDDTW GAARSQGRRHEGVDIFAKKNTPIRSTTPGIVTKIGRNRLGGKVIGIQGPGAWHYYAHLNK FARIRLYERVKEGQVIGYVGKTGNARTTPAHLHYGVYLPSGAVNPYPLINQSR >gi|241319308|gb|ACQV01000026.1| GENE 21 21528 - 22388 720 286 aa, chain + ## HITS:1 COG:no KEGG:Hore_13500 NR:ns ## KEGG: Hore_13500 # Name: not_defined # Def: hypothetical protein # Organism: H.orenii # Pathway: not_defined # 1 286 1 265 265 160 35.0 5e-38 MNAKKLVKATNIVGMVAVVLLVYWVFALILIQVFGLKVFREYITEIFLMSILGIFAVMGG TLMLNIMLNLTRIAERGQEEESKGGRKTLSLLLAVFPLLAALLFGGNYLTIQQKRDILIQ SSERIVKDNPAQIDALADYRFDLAYIRKTSEILDLMAKDNSSFKSAVIIVPDKIDNKPVY LAFSADSSRLTLSDEVVPATNQNAEGSDNFVVNRNGEKVAVKKTDYVYSPDLKEREYLQK VFARQTQEMRYEAEDGHYSLCHPYRKNGKTIILCFSDYQEYGKIGS >gi|241319308|gb|ACQV01000026.1| GENE 22 22429 - 23160 89 243 aa, chain + ## HITS:1 COG:no KEGG:CGSHiEE_00205 NR:ns ## KEGG: CGSHiEE_00205 # Name: not_defined # Def: glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) # Organism: H.influenzae_PittEE # Pathway: not_defined # 3 233 15 250 260 172 45.0 1e-41 MNDLQELLLNKYVEILNKPEHQNLLRAISNKDNKLSNIHLGFVPEHYESAEHKILIVGRE TRSWYDSKKFDEYHAENVRQLMSLSKDFIWRNLTGDLKRNTKGATFFNFVRNVAKRSGNE GILWANIFAVDYKTKHPKHSDWFEDIKTLSCKLLRAQIEILKPQIILFVSGDGGVAARRE CFPDLSGSGQGINGLNKGKLEKFSFEGDKEIICYRAPHPSTRNREGRRALKVLVEELLPS AKV >gi|241319308|gb|ACQV01000026.1| GENE 23 23211 - 24575 1323 454 aa, chain + ## HITS:1 COG:NMB0416 KEGG:ns NR:ns ## COG: NMB0416 COG0770 # Protein_GI_number: 15676328 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Neisseria meningitidis MC58 # 1 449 1 452 455 726 86.0 0 MKPLDLNFICQTLGLPMPSENQPVSRIVTDSRDIQEGDVFFALAGERFDAHDFVEDVLAA GATAVVVSREDCAALKGALKVGDTLVALQKLAKAWRENVNPFVFGITGSSGKTTVKEMLA GVLRHRFGDEAVLATAGNFNNHIGLPLTLLKLNEKHRYAVIEMGMNHFGELSLLTRIAGP NVALVNNALRAHVGCGFDGVADIAKAKSEIYEGLLSDGIALIPCEDANIATFEASTAQLN AQTFGVASGDIHAENIELKPLSCEFDLVRGNERVAVVLPVPGRHNVHNAVAAAALALAAG LSLAEVSDGLKNFSNIKGRLNIKQGIKGATLIDDTYNANPDSMKVAIDVLAAMPAPRIFV MGDMGELGEDEAAAMHAEVGAYARDKGIEAAYFVGDNSVEAAETFGAEGLWFADKDPLIQ VLSHDLPERATVLVKGSRFMKMEEVVEALAATTA >gi|241319308|gb|ACQV01000026.1| GENE 24 24592 - 24741 145 49 aa, chain + ## HITS:1 COG:no KEGG:NMB0417 NR:ns ## KEGG: NMB0417 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 3 49 8 54 58 73 70.0 2e-12 MKKIFLLAGLLIAAFYAGMKVQAFIYEDTCLDLGGGKNPGNYPICVVEK >gi|241319308|gb|ACQV01000026.1| GENE 25 24843 - 25925 1470 360 aa, chain + ## HITS:1 COG:NMA2066 KEGG:ns NR:ns ## COG: NMA2066 COG0472 # Protein_GI_number: 15794944 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Neisseria meningitidis Z2491 # 1 360 1 360 360 615 96.0 1e-176 MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALVFSLLLGPWTIRKLTALKVGQAVRTDG PQTHLIKNGTPTMGGSLILTAITVSTILWGNWANPYIWILLGVLLATGALGFYDDWRKVV YKDPNGVSAKFKMVWQSSVAIIAGLALFYLATNSANNILIVPFFKQVALPLGVVGFLVLS YLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYASGHSQFAQYLQLPYVAGANEVV IFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAALGTVAVIIRQEFVLVIMGGLFVVE AISVMLQVGWYKRTKKRIFLMAPIHHHYEQKGWKETQVVVRFWIITIVLVLIGLSTLKIR >gi|241319308|gb|ACQV01000026.1| GENE 26 26041 - 26520 760 159 aa, chain + ## HITS:1 COG:RSc2090 KEGG:ns NR:ns ## COG: RSc2090 COG2346 # Protein_GI_number: 17546809 # Func_class: R General function prediction only # Function: Truncated hemoglobins # Organism: Ralstonia solanacearum # 2 120 13 131 134 122 45.0 2e-28 MYQSFGGATGIRTLTDRFYDLMELEPQYQALRQMHGEDMTLIREKLYEFFSGWLGGPQLF VEKYGHPQLRARHMPFAVNVQVRNEWIACFAQAMSELDIDKALAEPVLIQIFAMADWCRN QNEDGIEPPMPPMAVDPTIRIPELKNVLKQYGVDGYFEA >gi|241319308|gb|ACQV01000026.1| GENE 27 26575 - 27183 872 202 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760227|ref|ZP_04758323.1| ## NR: gi|241760227|ref|ZP_04758323.1| hypothetical protein NEIFL0001_0110 [Neisseria flavescens SK114] # 1 202 1 202 202 377 100.0 1e-103 MQITETLALADLTAVISITIAAIVAITGYRNTKHSARQTFDNFTLRFIETENADPHLYNA RQWLGQAAMQSDTDLADYADIAAYFKKHGLSGNLSIRSRADGGIESYTVSQNPAAQNLLH GYLQGSHSLTTLVEARNTAAEALLHGLLEENAYRLVRRRAFLHDYARIQNFIRAKQKHDA GYAQAFCELVRQWGADSEGGMK >gi|241319308|gb|ACQV01000026.1| GENE 28 27681 - 28172 227 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760202|ref|ZP_04758298.1| ## NR: gi|241760202|ref|ZP_04758298.1| hypothetical protein NEIFL0001_0111 [Neisseria flavescens SK114] # 1 163 16 178 178 306 100.0 2e-82 MNMNTYFAKNAKKLDEVIQIPSEGVKSIDVYALYGFVESFSPISTAEQIKQRVGEGLGYK DLFGTKSVHYRLEPKDYSHFFSDFNRIKSTLNPYDQFDSVYLILIEIKYNTHSVQILTRE AAVGEAFLFSKIIKNDERFLILLDSKGLKELFNMIDPNQNILK >gi|241319308|gb|ACQV01000026.1| GENE 29 28195 - 29268 460 357 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760199|ref|ZP_04758295.1| ## NR: gi|241760199|ref|ZP_04758295.1| hypothetical protein NEIFL0001_0112 [Neisseria flavescens SK114] # 1 357 1 357 357 635 100.0 1e-180 MTSSVDFNKKGFVASVQNKETFGRVLIENNAYSNKSKEFDKTKVNALMPADLDDVKKLDL ALQYLQQNEKANSLIQKASDMGVHIVIFKEGDNTFYPLRPNNTDGIIFWNPNQSAEIFSE INGKKVSLGVQSAANVLFHELVHATDPNLAKSDVEMDSYNKPFASGDEKHKFYNAPEYLA VTMSNEIVSKFHNEPIRPDYIGESMFVSVPNPINSQTNHYDQDGNLIGKTVKTYDEKNET IKTVNTDYLRQDERGLPVESETVTDINGEPIKQIQDESSFNYNLPDWNNLNGSDLYAAVL SADSSQLDMLGKSLAQSEEGQRMLRQGENLLAEYKEQQELERQQELVHSSRAMVRTL >gi|241319308|gb|ACQV01000026.1| GENE 30 29293 - 29817 189 174 aa, chain + ## HITS:1 COG:no KEGG:XCV1302 NR:ns ## KEGG: XCV1302 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 10 174 18 187 188 80 29.0 2e-14 MDDKKFDEAIKVLVMLRADVIEQGRKIDGRINEQQRALSEESDRFRRQVGNIVDNAGKTI RQETEQSLGLASEGYKKAVDELNREVGKLNKIIKSWYIGIGVVLAIAVIILFVVVRYTVV DLADRRAELESYEHAIETAKAFAESDAYICEGRICINTGKNVGNGYRQAKPRKK >gi|241319308|gb|ACQV01000026.1| GENE 31 29852 - 31189 1702 445 aa, chain + ## HITS:1 COG:NMA2064 KEGG:ns NR:ns ## COG: NMA2064 COG0771 # Protein_GI_number: 15794942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Neisseria meningitidis Z2491 # 1 445 1 445 445 857 96.0 0 MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVSQIGKMFDGLVFYTGRL KDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVIAITGSNG KTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQREGKKADVWVLELSSFQLENTESLR PTAATVLNISEDHLDRYDDLLDYAHTKDKIFRGDGVQVLNADDVFCHAMKRAGREVKWFS LEHKADFWLERETGRLKQGNEDLIATQDIPLQGLHNAANVMAAVALCEAVGLPREALLEH VKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGATAAAIAGLQNPLFVILGGMGKGQDFTP LRDALAGKAKGVFLIGVDAPQIRRDLDGCDLNMTDCATLEEAVQTAYAQAEVGDIVLLSP ACASFDMFKGYAHRSEVFTEAFKAL >gi|241319308|gb|ACQV01000026.1| GENE 32 31203 - 31763 660 186 aa, chain + ## HITS:1 COG:mlr7497 KEGG:ns NR:ns ## COG: mlr7497 COG3034 # Protein_GI_number: 13476231 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 48 184 25 161 163 134 45.0 1e-31 MKVGLKISLAAVVLLAVAASVFWFAAPIRSTTTVTTPSETPLPEDAVIDRLVVHKSKRTM SAYSQGRLLKTYPISLGKQPVGHKQFEGDGKTPEGKYRINERNPNSGYHKNLGVSYPNEA DKAYAAAQGKSPGGLIKIHGMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYRSVKHNA EIEILP >gi|241319308|gb|ACQV01000026.1| GENE 33 31966 - 33462 1726 498 aa, chain + ## HITS:1 COG:DR0235 KEGG:ns NR:ns ## COG: DR0235 COG0154 # Protein_GI_number: 15805271 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Deinococcus radiodurans # 1 491 45 540 561 253 39.0 7e-67 MNFQDYIHYDAVGLAELIRKKEVSADEVLQAALNRLDEVNPKLNLLAHDLRERAAAWQGS SENADTPLSGVPFLLKDLLADWEGAPTWSGSRMMQHYIAKQNSDLTQAYLDAGLRVFGKT TTPEWGAYPVTETEIYGITRNPWHLDYTAGGSSGGAAAAVASGVVPAAHGNDGGGSIRLP AHNCGVFGLKPTRGRSSYAPNASEAWQGLVCDHVLTRSVRDSAVLLDIAAQTQARALYAC PPPPENGFADSLKLETGRLKIAFWKQAWFGGGNDEGTEAAFAHSLKLMQDAGHELEEATP DFAPPEQLNRAARIIVMGETAKLFYQYQYETGQKLPHRLLEPTTWAMIVQGRQISAGEMA WARDVMLAQERAAKAFFTRYDVLMTPVCPRTTPKIGEMMPPPAAQKAMRLLFGTLRLGFL LKNNPFLEKEAAAALQYVGYTSPLNMSGNPAMSVPLYRHHRLPVGTQFAAAHGREDTLLS LAAQLEQIQPWAEIPQLA >gi|241319308|gb|ACQV01000026.1| GENE 34 33752 - 34996 1331 414 aa, chain + ## HITS:1 COG:NMB0421 KEGG:ns NR:ns ## COG: NMB0421 COG0772 # Protein_GI_number: 15676333 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Neisseria meningitidis MC58 # 1 414 9 423 423 533 69.0 1e-151 MLDRPIARDGRKFDVSLLWMVVLMTVFSLIMIYSASIAYAASEGGSQFSFVSKQAMFILF TVAICLPLFLLKMSFWRRIIPFYFAVSGLLLLLVLFVGREINGATRWIHIGPLNLQPTEF FKLATVLYLSSLFTRREEMLRDLDSLGWSSLFTGIGDLVCSPFKSEARVRVKERFRKFKT LILPIMLVAVGLVLIMGQPDFGSFVVIVGITMGMLFLAGFPWKYFAVLVATVVSGMGLLI LAAPYRMARVAAFLDPWSDPLGKGYQLTHSLMAIARGGWFGEGLGASLEKRFYLPEAHTD FIFAVIGEEFGFVGMLVLVFCYGWLVWRAFSIGKQARDSGLMFSAYIANGIGIWIGIQSF FNIGVNIGILPTKGLTLPFMSYGGSAVFIMLVCVTLLLRIDYENRQKMRGYSVE >gi|241319308|gb|ACQV01000026.1| GENE 35 35001 - 36068 1306 355 aa, chain + ## HITS:1 COG:NMA2062 KEGG:ns NR:ns ## COG: NMA2062 COG0707 # Protein_GI_number: 15794940 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Neisseria meningitidis Z2491 # 1 346 1 346 355 637 91.0 0 MSGKTFMLMAGGTGGHIFPALAVAESLQKRGHHVIWLGSQDSMEERIVPQYGIRLETLAI KGIRGNGIKRKLMLPFTLYKTVRAAQQIIKKHRVECVIGFGGFVTFPGGLAAKISGVPIV IHEQNAVAGLSNRQLSRWAKRVLYAFPKAFQHEGGLVGNPVRADIAALPVPEERFENRQG RLKVLVVGGSLGADVLNKTVPQALALLPEAARPQMYHQSGRNKLGNLQADYDALGVQAEC VEFITDMVSAYRDADLVICRAGALTIAELTVAGLGALLVPYPHAVDDHQTANARFMVQAE AGLLLPQTQLTAEKLAEILGGLNREKCLKWAKNARTLALPHSADDVAEAAIACTA >gi|241319308|gb|ACQV01000026.1| GENE 36 36203 - 37030 762 275 aa, chain + ## HITS:1 COG:PM1322 KEGG:ns NR:ns ## COG: PM1322 COG3315 # Protein_GI_number: 15603187 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Pasteurella multocida # 1 270 1 272 276 315 55.0 4e-86 MSEKISPETVSALSSTMLIPLWAKAVEQGRAQPLLRDDEAVRMLDKIDYDFSKFAKVKAS QVGCCGRAKLLDDMTRHFIAKHPDAVVVQIGAGLDARYERLGKPRITAWYDLDLPEVIEV RRMLLPESDNHYLGASMFDEAWMNTVAAYGKPVLLVIEGVLMYFEETQVQDFFKQVARRL PNAQLAFDTIPKAYIGQSKHHDALGKMDKPPEFRWAISGVDDILRLMPGVEIIEEAGLSS VCKPCYPWLLRLLYATAWGRRKLDMRLMRIQVPSS >gi|241319308|gb|ACQV01000026.1| GENE 37 37296 - 38705 1932 469 aa, chain + ## HITS:1 COG:NMA2061 KEGG:ns NR:ns ## COG: NMA2061 COG0773 # Protein_GI_number: 15794939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 468 38 505 506 902 97.0 0 MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAVTEHLSALGIQVYPGHTA EHVNGADVVVTSTAVKKDNPEVVAALEQQIPVIPRALMLAELMRFRDGIAIAGTHGKTTT TSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVAEADESDASFLYLTPIMSVVT NIDEDHMDTYGHSVEKLHQAFVDFIHRMPFYGKAFLCIDSEHVRAILPKVSKPYATYGLD DTADIYATDIENIGAQMKFTVHVQMKGHEQEPFEVVLNMPGRHNVLNALAAIGVALEVGA SVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTALLVDDYGHHPVEMAATLSAARGAYPEK RLVLAFQPHRYTRTRDLFEDFTKVLNTVDALVLTEVYAAGEEPIAAADSRALARAIRVLG KLEPIYCENVVDLPQMLLNVLQDGDVVLNMGAGSINRVPSALVELSKQS >gi|241319308|gb|ACQV01000026.1| GENE 38 38793 - 39707 927 304 aa, chain + ## HITS:1 COG:NMB0424 KEGG:ns NR:ns ## COG: NMB0424 COG1181 # Protein_GI_number: 15676336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Neisseria meningitidis MC58 # 1 304 1 304 304 543 91.0 1e-154 MQNFGKVAVLMGGFSSEREVSLDSGAAILAALKSKGVDAHAFDPKETPLSELKTQGFQTA FNILHGTFGEDGAIQGALELMGIPYTGSGVAASALGMDKYRCKLIWQAVGLPVPEFVVLH DDSDFDAVEEKLGLPMFVKPASEGSSVGVVKVKEKGRLKSVYEELKHLQGEIIAERFIGG GEYSCPVLNGKGLPSIHIIPVTEFYDYEAKYNRDDTVYQCPSEDLSEAEENLMRELAVRG AQAIGADGCSRVDFLKDTDGKLYLLEINTLPGMTSHSLVPKSAGHTGVDFADLCIEILKT AHVG >gi|241319308|gb|ACQV01000026.1| GENE 39 39697 - 40416 357 239 aa, chain + ## HITS:1 COG:NMA2059 KEGG:ns NR:ns ## COG: NMA2059 COG1589 # Protein_GI_number: 15794937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Neisseria meningitidis Z2491 # 1 235 1 236 242 274 55.0 1e-73 MWDDAGALGRLTRRLLVLMTFLLIGSGIAWLYNSKYFPVKQIAIQGKLKYASNKELQTVA REHIRGNMFRADIDSAQAAFQELPWIDSAMVRRRFPETVEIILTERVPVAHWRAGGLVDS KGNVFAASLKQDLPIFEGQQGTGKDMVKHYADFSGILSPLKLTIKELIYTPRSAWLLVLN NGITVRLGRENEIKRLQQFAQIWPSLLREKQSRIEYVDMRYKDGFSVRYRPSENPSDSE >gi|241319308|gb|ACQV01000026.1| GENE 40 40491 - 41738 1554 415 aa, chain + ## HITS:1 COG:NMB0426 KEGG:ns NR:ns ## COG: NMB0426 COG0849 # Protein_GI_number: 15676338 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Neisseria meningitidis MC58 # 1 415 1 414 414 564 72.0 1e-160 MEQQQNKYISALDIGTSKVIALIGEIREDNEIHIVGLGQSPSRGLRAGMVTNIDATAQAI RQAVEDAELMADTKISRVVTGIAGNHIRSMNSQGVVKIKDGEVSQTDIDRAIETAKAINI PPDHNILHTVVQEYIIDNQPGVKEPIGMSGVRLDTRVHIITGANTALQNIQKCIQRCGLQ MDQIMLQPLASGHAVLTEDEKDLGVCVIDIGGGTTDIAVYTNGAIRHTAVIPVAGDLITK DLAQALRTPHSAAEYIKIHYGAAIPTMDGLDEMIEVPSVGDRQSRQISRRVLAEIIGPRV EEILELTLNELRRSGFPEEVLTSGIVLTGGASMLTGIVELAEEVFNLPARIGVPQEMGGV SERIRNPRYSTAIGLLQAARGEEDGAPVTGAIVVHDQAEKISLWARLMKFVKENF >gi|241319308|gb|ACQV01000026.1| GENE 41 41991 - 43190 1599 399 aa, chain + ## HITS:1 COG:NMA2057 KEGG:ns NR:ns ## COG: NMA2057 COG0206 # Protein_GI_number: 15794935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Neisseria meningitidis Z2491 # 1 399 1 392 392 587 85.0 1e-167 MEFVYDVAESATSPAVIKVIGLGGGGCNAINNMVANTIHGVEFISANTDAQSLAKNNAAK RIQLGTNLTRGLGAGANPEIGRAAAQEDREAIEDAIRGANMLFITTGMGGGTGTGSAPVV AEIAKEMGILTVAVVTRPFAYEGKRVHIAQAGLDQLKERVDSLIIIPNDKLMTALGEDVT MREAFRAADNVLRDAVAGISEVVTCPSDMINLDFADVKTVMSNRGIAMMGSGFAQGIDRA RLATDQAISSPLLDNVTLDGARGVLVNITTAPGCLKMSEFNEIMRIVNQNAHPEVECKFG AAEDESMSEDAIRITIIATGLKENGTDNQLRAAARTQQLVRGAAEVPQAQSQSSAESLVR TNRNIRSMNLTAADFSNQSVLDDFEIPAILRRQQHTSDK >gi|241319308|gb|ACQV01000026.1| GENE 42 43312 - 44280 441 322 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 6 304 3 301 632 174 34 1e-42 MTQKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVHNKFVVDNLRAKGAVFV DNLADVPKGATLIYSAHGVSKAVQEEAAQRGFRVFDATCPLVTKVHKEVARLDEQDYEII MIGHKGHVEVEGTMGQLPPGKMFLVETVEDVAGLNVKNPDKLAYVSQTTLSIDETKDIIA ALNQRFPNIRNPHKEDICYATTNRQTAVKELAEECDLVIVVGSPNSSNSNRLREVAALRG VDAYMVDNASYLKKEWFENKTKVGVTAGASAPEVLVREVLQTIQDWGHETIREGEGAEES IVFVLPKELRREGENKQILNKG >gi|241319308|gb|ACQV01000026.1| GENE 43 44294 - 44800 527 168 aa, chain - ## HITS:1 COG:NMB1832 KEGG:ns NR:ns ## COG: NMB1832 COG0597 # Protein_GI_number: 15677668 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Neisseria meningitidis MC58 # 1 160 11 170 175 241 74.0 4e-64 MSSSSSAKIPFFLLSLVAIILDQLSKWEILKHFTEGERLNIIPGFFDLTLAYNPGAAFSF LADQGGWQKFFFLGLAVVISLYLARAILRDEFGRWGKPGAAMIIGGAIGNVVDRLIHGHV VDFLLFYWQNWFYPAFNIADSFICVGAVCLVIDGLLHKKTPSNDTKAV >gi|241319308|gb|ACQV01000026.1| GENE 44 44949 - 45848 1373 299 aa, chain - ## HITS:1 COG:NMA0521 KEGG:ns NR:ns ## COG: NMA0521 COG0752 # Protein_GI_number: 15793519 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 297 1 297 301 600 95.0 1e-171 MLTFQQIIFKLQNYWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP KDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPT LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCSPVLGEITYGIERLAMYLQGVENVYDLVW AKTLDGNIVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEEQAKRLLAVEDTSLALP AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRIVAQKFVESREKLGFPLLKNQ >gi|241319308|gb|ACQV01000026.1| GENE 45 45930 - 46112 217 60 aa, chain - ## HITS:1 COG:NMA2158 KEGG:ns NR:ns ## COG: NMA2158 COG3024 # Protein_GI_number: 15795029 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 6 56 11 61 69 66 56.0 2e-11 MTAPVVKCPTCHKEVVWNTDSPYRPFCSKRCKLIDLGEWAQEKYTVSSEDDPFSDLLDGK >gi|241319308|gb|ACQV01000026.1| GENE 46 46109 - 46729 517 206 aa, chain - ## HITS:1 COG:NMA2157 KEGG:ns NR:ns ## COG: NMA2157 COG0237 # Protein_GI_number: 15795028 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Neisseria meningitidis Z2491 # 1 201 1 201 210 189 48.0 4e-48 MTLWIGLTGGIGSGKSSIAQMFAELGAPIIDADAISRSLTAENGEALPAIRQLFGDEVFD SEGRLNRMALREEVFRRPQSKKQLENLLLPLILNKIQQQKQQLASSAYGIVDVPLLIENP AFKAETDRILVVDVPESVQIERVHQRNGFSEEQTRQIMATQASRCDRLLHADDVLDNTHN MEEAKIKVARLHQYYQSIAQSLKETA >gi|241319308|gb|ACQV01000026.1| GENE 47 46729 - 47616 823 295 aa, chain - ## HITS:1 COG:NMB0332 KEGG:ns NR:ns ## COG: NMB0332 COG1989 # Protein_GI_number: 15676247 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Neisseria meningitidis MC58 # 12 291 4 283 286 388 70.0 1e-108 MLDSIYSAIDALSVLAPFAIPLAVILGLLIGSFLNVVIYRTPIMMEREWTQFSKEHLGIK LTDEEKQPFNLCKPNSRCPKCKNPVKPWQNIPILSYVLLGGKCHSCKTAIGIRYPLIELL TSVLFGIVAWQYGWSCTTIGGLILTAILIALTFIDADTQYLPDSLTQPLIWIGLLFNLND TFVPLHSAVLGAIAGYMSLYTLCAVYKLLTGKIGMGNGDFKLLAALGAWLGVGILPVLIF MAALVGLVGALIARVGKGQYFAFGPSLAVAGWIILVANAPITQLVQWWLVQSGFR >gi|241319308|gb|ACQV01000026.1| GENE 48 47618 - 48859 1483 413 aa, chain - ## HITS:1 COG:NMA2155 KEGG:ns NR:ns ## COG: NMA2155 COG1459 # Protein_GI_number: 15795026 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Neisseria meningitidis Z2491 # 9 413 8 410 410 561 71.0 1e-159 MAQAEQKRSLFGSRSKGKRFTFEGKNTETERLVHGEVVAKDEEEARKKLQRRGIRPLRIS KVKTARKRRITQEDITVFTRQLATMMKAGLPLMQAFEIVARGHSNPSMTEMLMQVRSDVE QGSALGKSFSKYPKYFDRFYCNLVSAGESGGVLESLLDKLAVYKEKTQAIKKKVKTALTY PIAIIVVAIALIFIMMMFVLPAFKEVYANMGAELPSLTQLVMSLSDLFVDYGWIMIILLI VSAFGLYKLHEKSPTFQKRIDALILRLPVFGAIVRKATIARWARTTSTLFAAGVPLVEVL DSVAGASGNILYEEATQDIRAKVTQGLSLTSSMQSTDMFPNMVIQMAAIGEESGSLDDML NKAAEFYEDEVDNSVSRLSHLMESIIMVVLGSIIGILLIAMYLPLFKLGNVVG >gi|241319308|gb|ACQV01000026.1| GENE 49 48939 - 50618 2058 559 aa, chain - ## HITS:1 COG:NMA2159 KEGG:ns NR:ns ## COG: NMA2159 COG2804 # Protein_GI_number: 15795030 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Neisseria meningitidis Z2491 # 1 559 1 558 558 902 77.0 0 MSVGLLRVLVQSQTISNQQAEHYNSLLQSGKEILPNLFSDGIISPKALGELVARVFSYPL LDLRYYPRNNVVSDILTEEQMVQNRCIPIFKRGRKVYFAVSDPTQIQKFQKIAFASGLSV DLVVVPDDQLSSLLEWLGQRSTTILKEINDEHEATQQSQSLYIDNEEAEDGPIPRFIHKT LSDALNAGASDIHFEFYEQMARVRFRVDGQLREVVQPPVAVRGQLASRIKVMARLDISEK RIPQDGRIQIAFHKHGRPIDFRVSTLPTLFGEKVVMRILNSDGTSLNIDQLGLEPFQKEM LLEAINRPYGMVLVTGPTGSGKTVSLYTCLSILNTEDVNISTAEDPAEINLPGVNQVNVN EKQGLTFAAALRSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHTNNAPATLS RLLNMGVAPFNIASSVSLIMAQRLLRRLCPNCKREVERPPVPALKKAGFTDTDLAQDWKL YRPVGCDSCRGKGFKGRVGIYEVMPVSDEMQKVIMNNGTEVDIMNMAYQEGMVDLRRAGL MKVMQGLTSLEEVTAHTND >gi|241319308|gb|ACQV01000026.1| GENE 50 51022 - 54237 4558 1071 aa, chain - ## HITS:1 COG:NMA0602 KEGG:ns NR:ns ## COG: NMA0602 COG0458 # Protein_GI_number: 15793592 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Neisseria meningitidis Z2491 # 1 1071 1 1071 1071 2093 95.0 0 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIICSIENFDPM GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIP RFAFEKFPAADNRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSSDKAEIR RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLVKEEQQVSAGCLQDLD FAALRRLKRKGFSDKRIAQLLGVKEKEVREHRYALKLHPVYKRVDTCAAEFATETAYLYS TYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETV STDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSA DSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQ VVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAG IHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRA SRTVPFVSKATGVPLAKVGARCMAGISLQEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTI LGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLAVRDEDKPLIVKTAQNFQA LGYGVCATRGTAEYLKEHGIIVQAVNKVQEGRPHIVDAIKNGEIALVVNTVSSSAQSIAD SHSIRRTSLTQRVPQYTTIAGGEAMSEGAKSRDHLGVYSVQELHGRLKNKA >gi|241319308|gb|ACQV01000026.1| GENE 51 54244 - 54840 150 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760231|ref|ZP_04758327.1| ## NR: gi|241760231|ref|ZP_04758327.1| hypothetical protein NEIFL0001_0136 [Neisseria flavescens SK114] # 52 198 1 147 147 238 100.0 2e-61 MSQKTWEIYAGLHLIGIIILAIFFTYLTLSSIPLGKYHYIVSSLSGIFAASMLNFLKKDV PYFKKNKYLKLLYSFIFKLILGYLLIWVTFKITNDFPQDKFLFIGYCSFWFWFANILTGE VINFVNNETNLNNEESAFLFDFISYYRKDFNDNFHAKNKPISKELKKLKPSADINEHKTL SSIEDKLKTTVVKIVNRE Prediction of potential genes in microbial genomes Time: Thu May 26 11:55:33 2011 Seq name: gi|241319131|gb|ACQV01000027.1| Neisseria flavescens SK114 ctg1118407793875, whole genome shotgun sequence Length of sequence - 147299 bp Number of predicted genes - 147, with homology - 141 Number of transcription units - 87, operones - 38 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.360 - CDS 1 - 262 466 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN - Term 278 - 320 9.4 2 1 Op 2 . - CDS 359 - 1174 1545 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 1202 - 1261 8.3 - Term 1270 - 1310 9.8 3 2 Tu 1 . - CDS 1335 - 2600 1844 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 2621 - 2680 1.9 4 3 Tu 1 1/0.440 + CDS 3004 - 3735 997 ## COG0546 Predicted phosphatases + Prom 3742 - 3801 2.8 5 4 Op 1 . + CDS 3836 - 4297 657 ## COG2137 Uncharacterized protein conserved in bacteria 6 4 Op 2 . + CDS 4373 - 4534 242 ## NMB1480 hypothetical protein + Term 4610 - 4649 10.0 - Term 4598 - 4637 10.0 7 5 Op 1 18/0.000 - CDS 4654 - 6810 2476 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 8 5 Op 2 25/0.000 - CDS 6915 - 7121 347 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 9 5 Op 3 . - CDS 7175 - 7792 581 ## COG0194 Guanylate kinase - Prom 7816 - 7875 7.7 + Prom 7872 - 7931 5.6 10 6 Tu 1 . + CDS 7961 - 8521 733 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Term 8517 - 8550 4.5 11 7 Tu 1 . - CDS 8567 - 9304 636 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 9463 - 9522 8.1 - Term 9453 - 9517 20.0 12 8 Op 1 . - CDS 9530 - 10429 1551 ## PROTEIN SUPPORTED gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific - Prom 10456 - 10515 7.3 - Term 10461 - 10505 13.2 13 8 Op 2 . - CDS 10525 - 12780 2977 ## COG3256 Nitric oxide reductase large subunit - Prom 12843 - 12902 6.6 + Prom 12975 - 13034 8.9 14 9 Tu 1 . + CDS 13181 - 14338 1816 ## COG2132 Putative multicopper oxidases + Term 14436 - 14489 0.2 15 10 Tu 1 . - CDS 14269 - 14400 83 ## - Prom 14454 - 14513 3.7 + Prom 14407 - 14466 6.3 16 11 Tu 1 . + CDS 14512 - 15267 885 ## COG1262 Uncharacterized conserved protein + Term 15297 - 15331 3.1 + Prom 15321 - 15380 6.6 17 12 Op 1 . + CDS 15478 - 15747 449 ## PROTEIN SUPPORTED gi|225075799|ref|ZP_03718998.1| hypothetical protein NEIFLAOT_00815 + Term 15764 - 15794 3.0 + Prom 15783 - 15842 7.6 18 12 Op 2 . + CDS 15926 - 18019 2103 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 18034 - 18078 11.4 - Term 18022 - 18066 13.0 19 13 Op 1 . - CDS 18098 - 18250 58 ## gi|261379811|ref|ZP_05984384.1| putative diacylglycerol kinase 20 13 Op 2 . - CDS 18287 - 19765 2019 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 19830 - 19889 3.3 + Prom 19914 - 19973 4.6 21 14 Op 1 2/0.360 + CDS 20015 - 20677 717 ## COG0586 Uncharacterized membrane-associated protein 22 14 Op 2 2/0.360 + CDS 20744 - 21727 1345 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 23 14 Op 3 . + CDS 21741 - 22508 906 ## COG0084 Mg-dependent DNase + Prom 22695 - 22754 8.3 24 15 Tu 1 . + CDS 22796 - 24064 1851 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 24080 - 24127 11.6 + Prom 24112 - 24171 6.1 25 16 Op 1 . + CDS 24221 - 25297 1638 ## COG0216 Protein chain release factor A + Prom 25302 - 25361 4.6 26 16 Op 2 . + CDS 25446 - 26948 2234 ## COG0280 Phosphotransacetylase + Term 26972 - 27022 15.1 + Prom 26984 - 27043 3.8 27 17 Tu 1 . + CDS 27066 - 28148 1203 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 28162 - 28197 7.4 - Term 28150 - 28185 7.4 28 18 Tu 1 . - CDS 28218 - 29258 1438 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 29362 - 29421 8.7 + Prom 29331 - 29390 9.9 29 19 Tu 1 . + CDS 29421 - 30455 660 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase - Term 30343 - 30381 8.5 30 20 Op 1 . - CDS 30462 - 30812 250 ## gi|241760385|ref|ZP_04758480.1| hypothetical protein NEIFL0001_1563 31 20 Op 2 . - CDS 30822 - 31019 281 ## COG4391 Uncharacterized protein conserved in bacteria - Prom 31088 - 31147 4.3 + Prom 30957 - 31016 1.9 32 21 Tu 1 . + CDS 31127 - 31627 576 ## NMA0720 hypothetical protein - Term 31624 - 31676 13.1 33 22 Tu 1 . - CDS 31691 - 32464 1128 ## COG0501 Zn-dependent protease with chaperone function - Prom 32493 - 32552 5.2 - Term 32521 - 32558 8.7 34 23 Tu 1 . - CDS 32573 - 33529 1143 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 33677 - 33736 4.8 + Prom 33490 - 33549 6.7 35 24 Tu 1 . + CDS 33795 - 35060 247 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 35070 - 35119 6.2 - Term 35144 - 35200 19.3 36 25 Tu 1 . - CDS 35267 - 35599 509 ## gi|241760262|ref|ZP_04758357.1| putative lipoprotein - Prom 35837 - 35896 3.6 37 26 Tu 1 . - CDS 35908 - 36000 68 ## + Prom 35903 - 35962 5.5 38 27 Tu 1 . + CDS 36033 - 37424 1738 ## COG0513 Superfamily II DNA and RNA helicases + Term 37469 - 37512 10.0 - Term 37499 - 37551 5.0 39 28 Op 1 . - CDS 37608 - 40193 3798 ## COG1049 Aconitase B - Prom 40320 - 40379 8.1 40 28 Op 2 . - CDS 40394 - 41317 599 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 41501 - 41560 8.8 + Prom 41430 - 41489 5.4 41 29 Tu 1 . + CDS 41525 - 42904 1961 ## COG0165 Argininosuccinate lyase + Term 42928 - 42967 9.1 - Term 42906 - 42962 19.5 42 30 Tu 1 . - CDS 43108 - 43215 87 ## - Prom 43410 - 43469 3.2 + Prom 42923 - 42982 4.8 43 31 Tu 1 . + CDS 43198 - 43596 344 ## gi|241760371|ref|ZP_04758466.1| hypothetical protein NEIFL0001_1576 + Term 43599 - 43642 12.6 - Term 43574 - 43638 15.6 44 32 Tu 1 . - CDS 43646 - 45034 2204 ## COG0114 Fumarase + Prom 45277 - 45336 8.4 45 33 Op 1 1/0.440 + CDS 45359 - 47275 2135 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 46 33 Op 2 . + CDS 47332 - 48309 1309 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 47 33 Op 3 . + CDS 48392 - 49189 463 ## gi|241760284|ref|ZP_04758379.1| hypothetical protein NEIFL0001_1580 48 33 Op 4 . + CDS 49205 - 50179 985 ## H16_B2313 RTX toxin exported protein 49 33 Op 5 . + CDS 50218 - 50775 425 ## gi|241760288|ref|ZP_04758383.1| hypothetical protein NEIFL0001_1582 + Term 50822 - 50866 -0.7 50 34 Op 1 7/0.040 + CDS 50886 - 51683 835 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 51 34 Op 2 . + CDS 51683 - 52375 178 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 52570 - 52598 2.3 + Prom 52428 - 52487 3.9 52 35 Tu 1 . + CDS 52673 - 53299 423 ## COG4300 Predicted permease, cadmium resistance protein + Term 53499 - 53527 2.3 + Prom 53357 - 53416 2.9 53 36 Tu 1 . + CDS 53619 - 54692 1082 ## COG3213 Uncharacterized protein involved in response to NO + Term 54695 - 54740 13.3 - Term 54682 - 54729 12.1 54 37 Op 1 . - CDS 54744 - 56387 2646 ## COG0166 Glucose-6-phosphate isomerase 55 37 Op 2 2/0.360 - CDS 56531 - 57379 1126 ## COG1737 Transcriptional regulators 56 37 Op 3 6/0.080 - CDS 57457 - 58437 1275 ## COG0837 Glucokinase 57 37 Op 4 15/0.000 - CDS 58418 - 59128 179 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 58 37 Op 5 . - CDS 59177 - 60622 1915 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 59 38 Op 1 8/0.040 + CDS 61104 - 62939 2920 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 60 38 Op 2 . + CDS 62985 - 63668 1180 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 63691 - 63732 9.1 - Term 63668 - 63728 12.8 61 39 Op 1 . - CDS 63731 - 65335 1429 ## Rpic_4119 amine oxidase 62 39 Op 2 . - CDS 65402 - 65617 156 ## gi|241760312|ref|ZP_04758407.1| hypothetical protein NEIFL0001_1596 63 39 Op 3 . - CDS 65664 - 66047 340 ## COG1586 S-adenosylmethionine decarboxylase 64 39 Op 4 . - CDS 66044 - 67738 1388 ## Rpic_4123 putative transmembrane protein - Prom 67793 - 67852 2.9 65 40 Op 1 1/0.440 - CDS 67942 - 68955 1252 ## COG4260 Putative virion core protein (lumpy skin disease virus) 66 40 Op 2 . - CDS 69006 - 69404 561 ## COG3766 Predicted membrane protein - Prom 69534 - 69593 5.2 + Prom 69511 - 69570 6.5 67 41 Tu 1 . + CDS 69610 - 70362 1141 ## SSA_1740 hypothetical protein + Term 70377 - 70438 12.1 - Term 70374 - 70418 9.8 68 42 Tu 1 . - CDS 70436 - 70783 389 ## Vpar_1838 hypothetical protein - Prom 70805 - 70864 6.3 + Prom 70866 - 70925 6.0 69 43 Op 1 . + CDS 70957 - 71847 1343 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 70 43 Op 2 . + CDS 71866 - 72222 707 ## CV_1536 hypothetical protein + Term 72317 - 72369 16.7 - Term 72303 - 72357 17.1 71 44 Tu 1 . - CDS 72380 - 74098 2513 ## COG0018 Arginyl-tRNA synthetase - Prom 74125 - 74184 4.4 + Prom 74148 - 74207 2.2 72 45 Op 1 . + CDS 74252 - 74788 589 ## COG1335 Amidases related to nicotinamidase 73 45 Op 2 . + CDS 74802 - 75302 746 ## COG1247 Sortase and related acyltransferases + Term 75313 - 75353 8.1 - Term 75301 - 75341 8.1 74 46 Op 1 . - CDS 75359 - 76228 1238 ## COG0500 SAM-dependent methyltransferases 75 46 Op 2 . - CDS 76241 - 76630 459 ## SSU05_1576 superfamily I DNA/RNA helicase - Prom 76661 - 76720 5.2 + Prom 76670 - 76729 5.1 76 47 Op 1 . + CDS 76750 - 77187 694 ## COG0328 Ribonuclease HI 77 47 Op 2 . + CDS 77198 - 77296 58 ## + Prom 77299 - 77358 2.4 78 48 Op 1 2/0.360 + CDS 77436 - 77834 524 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 79 48 Op 2 . + CDS 77908 - 79101 1898 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Term 79114 - 79166 17.6 - Term 79107 - 79148 10.0 80 49 Tu 1 . - CDS 79164 - 80270 1226 ## COG1932 Phosphoserine aminotransferase - Prom 80299 - 80358 4.1 + Prom 80489 - 80548 7.4 81 50 Op 1 32/0.000 + CDS 80595 - 81044 698 ## COG0779 Uncharacterized protein conserved in bacteria 82 50 Op 2 20/0.000 + CDS 81073 - 82578 998 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 83 50 Op 3 . + CDS 82590 - 85484 4771 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 85496 - 85564 24.2 + Prom 85686 - 85745 4.3 84 51 Op 1 . + CDS 85834 - 86022 254 ## gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain protein 85 51 Op 2 . + CDS 86019 - 86198 226 ## gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain protein + Term 86203 - 86252 9.5 + Prom 86223 - 86282 3.9 86 52 Tu 1 . + CDS 86309 - 86866 781 ## COG0778 Nitroreductase + Term 86883 - 86935 10.1 87 53 Tu 1 . - CDS 86946 - 87827 1053 ## COG0524 Sugar kinases, ribokinase family - Prom 88051 - 88110 5.4 - Term 88074 - 88138 21.1 88 54 Op 1 31/0.000 - CDS 88153 - 89088 1298 ## COG0341 Preprotein translocase subunit SecF 89 54 Op 2 25/0.000 - CDS 89092 - 90945 2352 ## COG0342 Preprotein translocase subunit SecD - Term 90960 - 91007 3.0 90 54 Op 3 . - CDS 91021 - 91287 494 ## COG1862 Preprotein translocase subunit YajC - Prom 91367 - 91426 7.5 + Prom 91172 - 91231 5.2 91 55 Tu 1 . + CDS 91465 - 92523 1260 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Prom 92600 - 92659 9.2 92 56 Op 1 . + CDS 92756 - 93820 1928 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 93838 - 93888 12.7 + Prom 93857 - 93916 3.0 93 56 Op 2 . + CDS 93939 - 95081 1698 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 95097 - 95142 14.6 + Prom 95121 - 95180 6.7 94 57 Tu 1 . + CDS 95295 - 96890 2159 ## COG4108 Peptide chain release factor RF-3 + Term 96894 - 96939 11.7 - Term 96887 - 96923 8.9 95 58 Tu 1 . - CDS 96940 - 97710 662 ## COG0730 Predicted permeases - Prom 97730 - 97789 4.0 - Term 97761 - 97803 7.7 96 59 Tu 1 . - CDS 97830 - 98780 1439 ## COG0385 Predicted Na+-dependent transporter - Prom 98818 - 98877 3.5 - Term 98924 - 98962 10.2 97 60 Tu 1 . - CDS 98987 - 99874 1371 ## COG1561 Uncharacterized stress-induced protein - Prom 99907 - 99966 3.2 + Prom 99921 - 99980 4.5 98 61 Tu 1 . + CDS 100013 - 100741 1003 ## COG0689 RNase PH + Term 100749 - 100786 8.7 + Prom 100804 - 100863 4.5 99 62 Tu 1 . + CDS 100913 - 102133 1745 ## COG0527 Aspartokinases + Term 102151 - 102196 12.0 - Term 102137 - 102182 12.0 100 63 Op 1 . - CDS 102213 - 102653 437 ## COG2927 DNA polymerase III, chi subunit 101 63 Op 2 . - CDS 102691 - 105177 2646 ## COG2217 Cation transport ATPase - Prom 105285 - 105344 7.2 + Prom 105301 - 105360 6.3 102 64 Tu 1 . + CDS 105538 - 105663 211 ## + Term 105687 - 105728 10.4 103 65 Op 1 . - CDS 105732 - 106892 711 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 104 65 Op 2 . - CDS 106937 - 108172 1480 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Term 108216 - 108263 13.1 105 66 Op 1 22/0.000 - CDS 108277 - 109347 1307 ## COG0795 Predicted permeases 106 66 Op 2 . - CDS 109344 - 110459 1308 ## COG0795 Predicted permeases - Prom 110615 - 110674 3.5 + Prom 110428 - 110487 3.9 107 67 Op 1 . + CDS 110618 - 112027 2012 ## COG0260 Leucyl aminopeptidase 108 67 Op 2 . + CDS 112123 - 112596 648 ## COG0662 Mannose-6-phosphate isomerase + Term 112709 - 112756 12.5 + Prom 112740 - 112799 5.2 109 68 Tu 1 . + CDS 112825 - 115113 2657 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 115136 - 115173 7.3 - Term 115119 - 115167 14.3 110 69 Tu 1 . - CDS 115198 - 116013 1081 ## COG0688 Phosphatidylserine decarboxylase - Prom 116118 - 116177 3.8 - Term 116167 - 116193 -1.0 111 70 Op 1 . - CDS 116239 - 116505 195 ## gi|241760324|ref|ZP_04758419.1| hypothetical protein NEIFL0001_1649 112 70 Op 2 . - CDS 116486 - 116893 469 ## gi|241760370|ref|ZP_04758465.1| hypothetical protein NEIFL0001_1650 - Prom 116917 - 116976 2.3 113 71 Tu 1 . - CDS 117004 - 117438 785 ## gi|241760344|ref|ZP_04758439.1| conserved hypothetical protein - Prom 117486 - 117545 9.1 - Term 117553 - 117612 15.1 114 72 Op 1 39/0.000 - CDS 117631 - 118521 1591 ## COG0074 Succinyl-CoA synthetase, alpha subunit 115 72 Op 2 . - CDS 118532 - 119698 1800 ## COG0045 Succinyl-CoA synthetase, beta subunit 116 72 Op 3 . - CDS 119770 - 120057 342 ## NMO_0854 hypothetical protein - Prom 120085 - 120144 5.4 117 73 Tu 1 30/0.000 - CDS 120182 - 121615 827 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 121639 - 121698 6.5 - Term 121817 - 121870 15.2 118 74 Op 1 21/0.000 - CDS 121875 - 123056 1583 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 119 74 Op 2 2/0.360 - CDS 123156 - 125984 3529 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 126125 - 126184 4.2 - Term 126008 - 126050 -0.8 120 75 Tu 1 2/0.360 - CDS 126194 - 127477 1394 ## COG0372 Citrate synthase - Term 127548 - 127592 8.2 121 76 Op 1 4/0.120 - CDS 127602 - 127850 282 ## COG2938 Uncharacterized conserved protein 122 76 Op 2 36/0.000 - CDS 127854 - 128561 1054 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit - Prom 128589 - 128648 2.7 123 76 Op 3 22/0.000 - CDS 128681 - 130444 2550 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 124 76 Op 4 24/0.000 - CDS 130447 - 130788 432 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 125 76 Op 5 . - CDS 130782 - 131159 650 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 126 77 Tu 1 . - CDS 131786 - 132058 153 ## NMC0454 hypothetical protein - Prom 132252 - 132311 4.4 + Prom 132184 - 132243 2.8 127 78 Tu 1 . + CDS 132266 - 132649 679 ## COG3339 Uncharacterized conserved protein + Term 132685 - 132732 15.5 - Term 132671 - 132719 14.1 128 79 Op 1 . - CDS 132734 - 133234 371 ## NGO1251 hypothetical protein 129 79 Op 2 . - CDS 133243 - 133341 61 ## 130 79 Op 3 . - CDS 133387 - 134355 821 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 131 79 Op 4 . - CDS 134425 - 135024 393 ## NMC0714 putative integral membrane protein 132 79 Op 5 . - CDS 135024 - 135875 698 ## COG0253 Diaminopimelate epimerase - Prom 135907 - 135966 4.7 + Prom 135810 - 135869 2.9 133 80 Tu 1 . + CDS 136056 - 136547 953 ## gi|225075131|ref|ZP_03718330.1| hypothetical protein NEIFLAOT_00130 + Term 136773 - 136804 3.4 + TRNA 136687 - 136762 84.9 # Asn GTT 0 0 - Term 137180 - 137228 7.9 134 81 Op 1 30/0.000 - CDS 137252 - 137587 177 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 135 81 Op 2 . - CDS 137678 - 139678 2195 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 139754 - 139813 6.4 + Prom 139713 - 139772 4.9 136 82 Tu 1 . + CDS 139996 - 140589 520 ## Apre_1390 aldose 1-epimerase + Term 140622 - 140650 1.0 - Term 140603 - 140645 2.3 137 83 Op 1 . - CDS 140650 - 141477 709 ## COG2951 Membrane-bound lytic murein transglycosylase B 138 83 Op 2 . - CDS 141407 - 141730 368 ## COG2951 Membrane-bound lytic murein transglycosylase B - Term 141867 - 141928 18.2 139 84 Op 1 27/0.000 - CDS 141939 - 142391 723 ## PROTEIN SUPPORTED gi|241760409|ref|ZP_04758504.1| ribosomal protein L9 140 84 Op 2 10/0.040 - CDS 142408 - 142638 388 ## PROTEIN SUPPORTED gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 141 84 Op 3 10/0.040 - CDS 142645 - 142941 112 ## COG2965 Primosomal replication protein N 142 84 Op 4 . - CDS 142944 - 143315 632 ## PROTEIN SUPPORTED gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 - Prom 143378 - 143437 5.0 + Prom 143466 - 143525 4.7 143 85 Tu 1 . + CDS 143561 - 145420 2888 ## COG0443 Molecular chaperone + Prom 145422 - 145481 7.1 144 86 Op 1 . + CDS 145503 - 146132 460 ## NMB1132 hypothetical protein 145 86 Op 2 . + CDS 146129 - 146491 307 ## SZO_07190 hypothetical protein 146 86 Op 3 . + CDS 146584 - 146925 497 ## COG0633 Ferredoxin + Term 146948 - 146994 6.1 - Term 146933 - 146983 15.4 147 87 Tu 1 . - CDS 147002 - 147298 343 ## gi|225077221|ref|ZP_03720420.1| hypothetical protein NEIFLAOT_02276 Predicted protein(s) >gi|241319131|gb|ACQV01000027.1| GENE 1 1 - 262 466 87 aa, chain - ## HITS:1 COG:NMA1755 KEGG:ns NR:ns ## COG: NMA1755 COG0299 # Protein_GI_number: 15794648 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Neisseria meningitidis Z2491 # 1 86 1 86 208 137 81.0 5e-33 MKNIVILISGRGSNMQAIVNANIPDANITAVLSNSETAAGLAWAAERGIATDSLNHKNFD SRLAFDQAMMEKIDAYQPDLGCIGGLY >gi|241319131|gb|ACQV01000027.1| GENE 2 359 - 1174 1545 271 aa, chain - ## HITS:1 COG:NMB1567 KEGG:ns NR:ns ## COG: NMB1567 COG0545 # Protein_GI_number: 15677418 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis MC58 # 1 270 1 271 272 329 77.0 3e-90 MNKTFKFSALALSALLALTACNQKDTAAKDAPAASAASNATADASAIGSTAQQASYAMGV DIGRSLKQMKDQGTEIDLKVFTEAMEAMFEGKEVKMTEAQAQEVMMKFLQEQQEKATAKR AEDAKVNLEKGEAFLKENATKEGVKTSASGLQYKIIKEGEGKKPTKDDIVTVEYEGRLID GTVFDSSKNSGEPVSFPVSQVIPGWTEGIQLLKEGGEATFYIPAKLAYREVGAGDKIGPN ATLVFDVKLVKVGAPDAAAQQPVQVDVQKVQ >gi|241319131|gb|ACQV01000027.1| GENE 3 1335 - 2600 1844 421 aa, chain - ## HITS:1 COG:NMA1687 KEGG:ns NR:ns ## COG: NMA1687 COG0334 # Protein_GI_number: 15794580 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 421 1 421 421 798 93.0 0 MSASAVKETLNPFEIAQKQVKTACDRLNADPAVFEILKKPQRVLEVNFPVKLDNGTVENF TGYRSQHNNAVGPYKGGVRFHPNVNMDEVKALSIWMTIKCCVAGIPYGGGKGGITLDPRN YSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMSWMVDAYENVVKHSAPGVFTG KPVEFGGSLARTEATGYGVNFAAVQALEKLGKDVKGATYAIQGFGNVGYHTGYYAHKAGA KIVAVSTVDVAIYNENGLDMEAIIKEFQTKGFITNEAGYGKEISNAELLALDVDVLAPCA LENQLTSENAGKVRAKIVVEGANGPTTPEADVILRQNGVLVVPDILANCGGVVVSYFEWV QNLQGYYWEFDEVQEKETVVLRRAFRDIWNLAQEYDVDLRTASYMMSIRRVEKAMKLRGW Y >gi|241319131|gb|ACQV01000027.1| GENE 4 3004 - 3735 997 243 aa, chain + ## HITS:1 COG:NMA1688 KEGG:ns NR:ns ## COG: NMA1688 COG0546 # Protein_GI_number: 15794581 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis Z2491 # 10 242 3 235 235 381 82.0 1e-106 MTESYSMTTAALEHVQAVAFDLDGTLCDSVPDLAAAVQAMCAYLGLPVLPTQTVESYVGD GISKLVHRVITNDREKEADPEIWEKGFVFFMKYYREHLSDFTRPYPETEAGLGLLKSLGI PLVVITNKNEILAAELLKQLNLDGYFSLVLGGDSLTEKKPSPLPLQHAAEVLGIDVANML MVGDSKNDIIAAKAAGCFSVGVTFGYGDMTLLSQDKATKPDLLIRALPEIYENLQPQKNK DEE >gi|241319131|gb|ACQV01000027.1| GENE 5 3836 - 4297 657 153 aa, chain + ## HITS:1 COG:NMA1689 KEGG:ns NR:ns ## COG: NMA1689 COG2137 # Protein_GI_number: 15794582 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 153 171 77.0 6e-43 MKLPKTLRARALDILSRQEVSRVGLKRKLAPHAESEEELEKVLDEFAERNWQSDQRYAEA YIHSKSNRYGTLRLKQALAQQGIDADDCREFLPDREDELQIAISVLRKKFKQEAQDLKEK QKQARFLAYRGFDADTIQTALKTAWNKDKDFYQ >gi|241319131|gb|ACQV01000027.1| GENE 6 4373 - 4534 242 53 aa, chain + ## HITS:1 COG:no KEGG:NMB1480 NR:ns ## KEGG: NMB1480 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 53 1 53 53 87 81.0 2e-16 MSDKPHDTPNPLIEDERKNPVYRLGQAVAGFMLLVWAGVLALVFFLVFRFWLS >gi|241319131|gb|ACQV01000027.1| GENE 7 4654 - 6810 2476 718 aa, chain - ## HITS:1 COG:NMA1917 KEGG:ns NR:ns ## COG: NMA1917 COG0317 # Protein_GI_number: 15794802 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Neisseria meningitidis Z2491 # 1 717 8 724 725 1280 86.0 0 MPAPLPTAPYDPLTAEARELLFRTASYLNTNEQAELERAVAYAFHAHDGQTRKSGEPYIT HPLAVATQLAIWHMDVQGLCAGVMHDVLEDTGVTKVEMAAEFGDTIAEMVDGLSKLEKLK FEDHAEHQAESFRKLILAMTKDVRVIVIKLADRLHNMRTLGSMRPEKRRRIAKETLEIYA QIANRIGLNNAYQELQDLSFQNLHPRRYETLKKAMDNSRKNRRDVVGKVLRAFGQRLVGV NIEAKIKGREKNLYSIHQKMLAKKLRFAEVMDIYGFRVIVNNIPACYAALGALHNLYHPK PGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQIRTREMDAVAEGGIAGHWIYKSGENT PDQAVLHMNRWMKNILDLQASSSNAIEFLEHVKVDLFPNEVYIVTPKGDILTLPKGATPI DFAYAVHTNIGHKTVAARINNVMMPLRTKLKTGDTVEIITSEHAKPNVAWLNFAVSSRAR SAIRQYIKNLNRHDAVVLGENLLQKALSSLLPKDILLSDDLKEKYLADLNTKQTSFEEVL YNVGMGHTLPVHVAMHIAELAGQHFGSAVKLSPIKVNDQETGRIHFAECCHPIPGDAIRA LLVKDKGMIIHRDTCQTLVKADPEEQLDAGWDSLRNQTYRTILNVKSEDAHGLLASMAQA ISNSGADIESVDTPTKAQAGTEGFVEFKFTIKVKDLEQVNQIIHAMHANPSIRKVIRG >gi|241319131|gb|ACQV01000027.1| GENE 8 6915 - 7121 347 68 aa, chain - ## HITS:1 COG:NMA1918 KEGG:ns NR:ns ## COG: NMA1918 COG1758 # Protein_GI_number: 15794803 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Neisseria meningitidis Z2491 # 1 68 1 68 68 113 95.0 8e-26 MARITTEDCTGKIPNHFDLTLVAARRARQLENGNTPLVDDIRNNKPTVTALREIAAGQIG TELLTRNK >gi|241319131|gb|ACQV01000027.1| GENE 9 7175 - 7792 581 205 aa, chain - ## HITS:1 COG:NMA1919 KEGG:ns NR:ns ## COG: NMA1919 COG0194 # Protein_GI_number: 15794804 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Neisseria meningitidis Z2491 # 1 205 1 205 205 311 78.0 4e-85 MQNHKKGNIYIISAASGTGKTTLVSRLLKNHDDIRVSISHTTRQPREGEAHGVHYHFVPK EEFESLIEQRAFLEHANVFGNYYGTSIAGVNSLSEEGYDVILEIDVQGAAQVRKSLPEAS SIFILPPSFEVLAQRLIGRGTDSEEVIQTRLSKARHEIEQSVLFDYVVVNDDLDRAEADL FHIIKAGRLKKSSQQGFISNLLENS >gi|241319131|gb|ACQV01000027.1| GENE 10 7961 - 8521 733 186 aa, chain + ## HITS:1 COG:NMA1920 KEGG:ns NR:ns ## COG: NMA1920 COG0503 # Protein_GI_number: 15794805 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Neisseria meningitidis Z2491 # 1 186 12 197 199 332 89.0 2e-91 MLIHPEVMGVEALADKIRKIENWPQKGILFHDITPVLQSAEYFRLLVDLLVYRYMGQKID VVAGLDARGFIIGAALAYQLNVGFVPIRKKGKLPFDTVSQSYALEYGEATVEIHTDAIKP GARVLLVDDLVATGGTMLAGVELIRKLGGEVIEAAAILEFTDLDGGKKIRESGAPLFTLC QNKGCM >gi|241319131|gb|ACQV01000027.1| GENE 11 8567 - 9304 636 245 aa, chain - ## HITS:1 COG:NMB1654 KEGG:ns NR:ns ## COG: NMB1654 COG2849 # Protein_GI_number: 15677503 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 9 245 8 244 245 330 67.0 1e-90 MNNYLKSGLLAAALFSMPVAAFAQQHTVYFNQNGKLTATMPSVAYVRQYKIEAGKAQVQD FYYPSMKKYSDPYEVPAGQIKVFVPALDNGTLTLWHFNGQKKMVGSYRNGKPHGEWVNWY PNGKKSAVMPYQNGLSEGVGSRYYRNGVKESEIQFKHDKANGHWKQWYSDGSPKTEMMMS NDKPTEIISWDENGRIVSELSIRNGKRSGIILDWYDDGAKKSELVYKDDQLVKKTFWDTD GYVLE >gi|241319131|gb|ACQV01000027.1| GENE 12 9530 - 10429 1551 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Neisseria flavescens SK114] # 1 299 1 299 299 602 100 1e-171 MFNQAAQELTTVRDLLRFAVSRFNDAGLFFGHGSDNAHDEAAYLILHTLNLPLDTLEPYL DAKLLQSEKEEVLSIIERRAVEHIPAAYLTHQAWQGEFDFYVDERVIVPRSFIYELLGDG IRPWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLE DRISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYLHEPKLALGSGEDGLDATRQ IILQAAKYLNPKGVLLVEIGHNREVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE >gi|241319131|gb|ACQV01000027.1| GENE 13 10525 - 12780 2977 751 aa, chain - ## HITS:1 COG:NMB1622 KEGG:ns NR:ns ## COG: NMB1622 COG3256 # Protein_GI_number: 15677472 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Neisseria meningitidis MC58 # 1 751 1 751 751 1348 96.0 0 MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSASGKVLMTKDDILAGQSA WQTIGGMEVGSVLGHGAYQAPDWTADWLHRELVAWLDLTAQETYGKKFDEVSPEEQAVLK TRLADEYRNQSRVKEDGSVVVSETRVKAIESILPYYHGVYSDDPKFQTTREHFAMKNNTL PSPEAREKLFNFFFWTSWSASTNRPDETFTYTNNWPHEPLINNVPTTENYMWSFTSVVLL LMGIGLLMWGYSFLTKHEEVEVPTEDPISKVQLTPSQKALGKYVFLTVALFVVQVLLGGL TAHYTVEGQGFYGIDTALGFEMADWFPYALTRTWHIQSAIFWIATGFLTAGLFLAPIVNG GKDPKFQRAGVNFLYIALFIVVGGSYAGNFFALTHIIPPELNFWFGHQGYEYLDLGRFWQ LLLMVGLLLWLFLMLRCTISAFKEKGTDKNLLAIFVASMVGVGVFYAPGLFYGEKSPIAV MEYWRWWVVHLWVEGFFEVFATAAFAFIFYNMGFVRRSTATASTLAAAAIFMLGGIPGTL HHLYFSGSTSASMAIGACFSALEVVPLVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAV AFWNMIGAGVFGFLINPPISLFYIQGLNTTAVHAHAALFGVYGFLALGFVLLVARYLKPN VQFDDKLMTWGFWLLNGGLVGMIAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTL RWVRTAADLIFIGGAVCVAIQATKIVFSRDK >gi|241319131|gb|ACQV01000027.1| GENE 14 13181 - 14338 1816 385 aa, chain + ## HITS:1 COG:NMB1623 KEGG:ns NR:ns ## COG: NMB1623 COG2132 # Protein_GI_number: 15677473 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis MC58 # 1 368 1 367 390 580 87.0 1e-165 MKRQTLAALIASVFALAACGEQAAKPAETPAATASAEAPAASDSQAAAETPSSELPVIDA IVTHAPEVPPPTDRDHPAKVRVKMETVEKTMTMEDGVEYHYWTFNGDVPGQMIRVREGDT VEVEFSNNPSSTVPHNVDFHAATGQGGGAEATFTAPGHTSTFSFKALQAGLYIYHCAVAP VGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAIAEQPE YVVFNGHVGSIAGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEAGKLINE NVQSTLIPAGGAAIIEFKADIPGSYTLVDHSIFRAFNKGALGQLKVEGDENPEIMTKKLS DTVYQPAGAAASAPAAASAASEAAK >gi|241319131|gb|ACQV01000027.1| GENE 15 14269 - 14400 83 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEATAALKSRAAVAWRIKPRDYLAASEAADAAAGAEAAAPAGW >gi|241319131|gb|ACQV01000027.1| GENE 16 14512 - 15267 885 251 aa, chain + ## HITS:1 COG:NMB1624 KEGG:ns NR:ns ## COG: NMB1624 COG1262 # Protein_GI_number: 15677474 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 251 1 251 251 419 81.0 1e-117 MKLIRLLFLGSALICGNTFAAEMVKIEGGSYRPLYLKKETSLIKVKPFQLDKYPVTNVEF AEFVKTHPQWQKDKISSKHAEKAYLKHWVKNGSNSFAPKASELKHPVTNVSWFAANAYCV SKGKRLPTIDEWEFAGLASATQKDGSSEPGYNRTILDWYADGGRNGLHDIGKNKPNYWGV YDMHGLIWEWTEDFNSSQLSAGSSNTQMFCSGASVGSSDPSNYAAFLRYGIRTSLQSKYV LNNLGFRCASK >gi|241319131|gb|ACQV01000027.1| GENE 17 15478 - 15747 449 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225075799|ref|ZP_03718998.1| hypothetical protein NEIFLAOT_00815 [Neisseria flavescens NRL30031/H210] # 1 89 1 89 89 177 100 2e-43 MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFKANPKDHHSRRGLLKMV SQRRRLLSYLRRTQPDTYRTLITRLGLRK >gi|241319131|gb|ACQV01000027.1| GENE 18 15926 - 18019 2103 697 aa, chain + ## HITS:1 COG:NMA1951 KEGG:ns NR:ns ## COG: NMA1951 COG2982 # Protein_GI_number: 15794834 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Neisseria meningitidis Z2491 # 6 697 45 738 740 640 49.0 0 MLHSGKFWLKTLVFSIAVLLCLAAVLSALMFRIFNTENIDAFIQKNFSAHGCQVKYNANI SRKWLPRPTLILKDLSLSSSEPDTPTLSIAESKISFGWSSLWSDAPIIEKWILSNPSLTL GPKNHLPACLQQNHTSKESFQLNRVIINSGNIRYHNKEQDIALNDLQFSLRRADSDGRPF DISGTLQNIGNPISWQGAGHLVQDDAGWSVPSLKLNLQTVLLKNKLDAQIAGSLNWQNQT ALFRDFNLQAESNYQNLHINARSPLLQFKNGYLHLNTLNGALTAGSENNQWDGSFKLDKA NLYPTVLTAANFELKGSHKNDRLQTNFTFSSPLVWQKGKGIDAPKLHLSTLQDTINRLPR PRFISTLEGQANFSLNTWEGRLKGAFDRQALALAFKYQRDAQPRPHLDAGIALQKLNLTP YLEDLKTQPSLNFPSLLAKSWLPDIEANLQIGSIQTAGLQLENIESLLTADKEHIALHRF KAGLYGGKTEGGLSIAATQPASYHLQQNAKGIQIQPLLQDLFGFHSFSGSGDAVIDIKTT GNDRAQMIQALNGSLLLDITNGAWHGIDMDSILKNGISSEKIDNSNLKTPFHHFTLNSEI EKGISHHINTELFSDSLHVVSSGYTDLNTQKLSENLLISNVLQPKNKPIPLKIGGTVQNP SITLDYSRLTNGMNTPAEKQKALQETIQEQWKWLKPR >gi|241319131|gb|ACQV01000027.1| GENE 19 18098 - 18250 58 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261379811|ref|ZP_05984384.1| ## NR: gi|261379811|ref|ZP_05984384.1| putative diacylglycerol kinase [Neisseria subflava NJ9703] # 1 50 13 62 62 70 98.0 4e-11 MEIIGSMFEGTVEILRLDWRKRKLSKKGLIMLAIWFAIIVALIVYMVIPQ >gi|241319131|gb|ACQV01000027.1| GENE 20 18287 - 19765 2019 492 aa, chain - ## HITS:1 COG:NMA1952 KEGG:ns NR:ns ## COG: NMA1952 COG0043 # Protein_GI_number: 15794835 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Neisseria meningitidis Z2491 # 1 492 1 492 492 969 97.0 0 MKYRDLREFIAGLEADGKLKRIQHPVSPHLEMTEIADRVLRAEGPALLFENPIKPDGTRY DYPVLANLFGTPERVALGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSKLPLLKDIW SMAPNVVKNAPCQEIVWEGEDVDLYKLPIQHCWPEDVAPLVTWGLTVTRGPNKKRQNLGI YRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYPVAVVLGCDPATILGAVTPVPDT LSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLEGVIHPNETALEGPYGDHTGYYNEQ DHFPVFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEITDFYLPP EGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVDVRDWKEVIWAVT TRMDPVRDTVLVENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVT AKIDEIWESLGL >gi|241319131|gb|ACQV01000027.1| GENE 21 20015 - 20677 717 220 aa, chain + ## HITS:1 COG:NMB1689 KEGG:ns NR:ns ## COG: NMB1689 COG0586 # Protein_GI_number: 15677537 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Neisseria meningitidis MC58 # 1 208 1 208 227 347 85.0 1e-95 MFAFLESFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGLGYTNSHWMVVVGMLG VLAGDGFMFVAGRVWGQKILKFKPIARVMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRT AVFVTAGISRKVSYLRFILMDGLAALISVPVWIYLGEYGARNTDWLMEKMHSLQSGIFAV LGIGAVIVGWIWWRKHRRHTFFREKLHEKRAAKAKKQANQ >gi|241319131|gb|ACQV01000027.1| GENE 22 20744 - 21727 1345 327 aa, chain + ## HITS:1 COG:NMA1947 KEGG:ns NR:ns ## COG: NMA1947 COG0252 # Protein_GI_number: 15794830 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Neisseria meningitidis Z2491 # 1 326 1 329 329 479 73.0 1e-135 MKQKIFVLYTGGTIGMTQSSAGLRPDTALVDKALAPFSDGLDFEWHVCQPLIDSSAVTLQ NQRDWLELIIAKLPDYDGILVLHGTDTMAYTANLFALSLQGLDKPVILTGSQWPYDAANS DAPRNLATAVSAFSLKLKQVAIAFDGKLFPAVGSSKVSTQTAAGFDNLHFGALAEWEENT GWHNIRTAPTQHSDGLKPRLPSPEAKVSVRTLIPGYAAQELSDGLPHLSAQALILQSYGH GNAPSNDAFVRTVQAFTQQGKLLLNISQVPQGCAAAVYAQGDALRQAGIINGGKCNLETA TALMTLAVSHDWNADKVQQELQQLNLL >gi|241319131|gb|ACQV01000027.1| GENE 23 21741 - 22508 906 255 aa, chain + ## HITS:1 COG:NMB1687 KEGG:ns NR:ns ## COG: NMB1687 COG0084 # Protein_GI_number: 15677535 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Neisseria meningitidis MC58 # 1 251 1 254 256 337 69.0 1e-92 MTFTDTHCHLADPKLANTLPTVLAEAQAVGVARFIVPATSLNDWQAVAQLERSSENIHIA LGIHPWFSDGIDETAFQQLETELIQHPQAWVGEIGLDFYGKEQTQAQRDTQTDVFIRQLI LAQNLNRRVIIHNLKATAAIAAAVKTAGFTQGGIVHAFSGSVEEAQILVKLGFKIGIGSL LLNPNAKKVRAALQALNDTDFVLETDSPFMLGHETNTPANIRRIAEIAAELRGVPLAQLA EITEQNVDSLLHTSP >gi|241319131|gb|ACQV01000027.1| GENE 24 22796 - 24064 1851 422 aa, chain + ## HITS:1 COG:NMA1639 KEGG:ns NR:ns ## COG: NMA1639 COG1914 # Protein_GI_number: 15794533 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Neisseria meningitidis Z2491 # 1 418 1 416 417 676 88.0 0 MAEQHTHSSTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGWQLALIIILTNLFKY PFFRFSAHYTLDMGKSLIEGYAEKSRVYLWVFLILCVVSATINAGAVAIVTAAIVKMAIP SLTLDTGIVSALIMASCLLILASGRYKALDNVSKIIIVSLTIATVAAAAVAMSRGMQMKP DFIEPTPWTLTGLGFLIALMGWMPAPIEISAINSLWVTEKQRINPSSYRDGIFDFNVGYI TSAVLAVVFLALGAYVQYGNGEEVQMAGGKYVGQLINMYAVTIGDWSRPLVAFIAFACMY GTTITVVDGYARAIAEPVRLLRGKDKTGNAELFAWNVWVAGSGLAVIFWFNSAMAELLKF AMITAFVSAPVFAWLNYRLVKGDKRHKLTMGMNFLAILGLIYLTGFTVLFLLNQTGILAA PK >gi|241319131|gb|ACQV01000027.1| GENE 25 24221 - 25297 1638 358 aa, chain + ## HITS:1 COG:NMB1686 KEGG:ns NR:ns ## COG: NMB1686 COG0216 # Protein_GI_number: 15677534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Neisseria meningitidis MC58 # 1 358 1 358 358 613 96.0 1e-175 MKPSILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQN DMAEAQEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTG GDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESG GHRVQRVPATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKT DSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGS GDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQAELLAAMGD >gi|241319131|gb|ACQV01000027.1| GENE 26 25446 - 26948 2234 500 aa, chain + ## HITS:1 COG:NMA0841_2 KEGG:ns NR:ns ## COG: NMA0841_2 COG0280 # Protein_GI_number: 15793811 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Neisseria meningitidis Z2491 # 177 500 1 324 324 563 94.0 1e-160 MAKILIAPVSAGLSADAAAKAFAAALNAQVFQAVDPAAETLLAQGKSDDWFDALVGKVAA LNADNLVIEGITPDADKLFLAGKNVELALSLDAGVVLALKSDNTDAAAVTQQLNLAKQLY TNSPGLLEGFIIDGAAAALGAQVAEQTGLTFFGSSDKLQDVSALAKREAKRLSPAQFRYN LIDFARKADMRIVLPEGAEPRTVAAAAICHEKGIARCVLLATREEVEAVAKERGISLPDS LEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQDTVVLGTMMMAQNDVDGLVSGAVH TTANTIRPALQLIKTAPGASLVSSVFFMLLPNQVLAFADCAVNPNPTPEQLADIAIQSAD SAKAFGIDPKVAMISYSTINSGSGPDVDAVIEATKLANEKRPDLAIEGPLQYDAATVPSI GQSKAPGSAVAGQATVLVFPDLNTGNCTYKAVQRSANVLSVGPLLQGLRKPVNDLSRGAL IEDIVFTIALTAVQAKQMQG >gi|241319131|gb|ACQV01000027.1| GENE 27 27066 - 28148 1203 360 aa, chain + ## HITS:1 COG:NMB1679 KEGG:ns NR:ns ## COG: NMB1679 COG2265 # Protein_GI_number: 15677527 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Neisseria meningitidis MC58 # 1 360 1 360 362 569 76.0 1e-162 MTAYQQQLADKKQYLQQLFQGLDFPEIEVFESPEQHYRMRAEFRIWHEGGEMFYAMFERG QKASGASLIRCDQFPAASESINALMPKLIEAASNHPELKNRWYAVEFLSTLSGEMLVTMI YHKKLNEAWQQAAQELAHNLGIHIIGRSRGQKIVLSQDFVTEALEVNGKTFRYRQIEGSF TQPNAQVCQKMLTWACDAAQNLGKDLLELYCGNGNFTLPLSQHFTQVLATEVSKTSVNAA QWNIEANQITNLKIARLSAEEFTEAYTQNREFRRLQEQGIDLKNYDFSTIFVDPPRAGVD DETLKLVARFDNVLYISCNPETLRTNLDTLCQTHTIERAALFDQFPFTHHIESGVWLKKK >gi|241319131|gb|ACQV01000027.1| GENE 28 28218 - 29258 1438 346 aa, chain - ## HITS:1 COG:NMB1395 KEGG:ns NR:ns ## COG: NMB1395 COG1063 # Protein_GI_number: 15677256 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 346 1 346 346 679 96.0 0 MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGIWKGKNPEVADGRILGH EGIGIVEEVGDAVKNIKVGDKVIISCVSKCCTCDNCKIQLYSHCRNGGWILGYMIDGTQA EYVRTPYADNSLVPLPDNVNEEVALLLSDALPTAHEIGVQYGDVKPGDTVFIAGAGPVGM SALLTAQLYNPAAIIVCDMDENRLKLAKELGATHTISSASGDVSKQVAAIVGEDGVDCAI EAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKLEKLWIKNLAITTGLVNTNTTEMLM KAISSSSVDYTKMMTHHFKFSELEKAYDVFKHAAENQAMKVVLEAD >gi|241319131|gb|ACQV01000027.1| GENE 29 29421 - 30455 660 344 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 1 310 7 310 378 258 45 8e-68 MNTPSSFARRLIDWQRQHGRNNLPWQVKDPYSVWLSEIMLQQTQVATVLDYYPRFLAKFP TVQSLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVGQFGGIFPSERKDLETLCGVGRS TAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESLLPSENADMP AYTQGLMDLGATVCKRTKPLCHQCPMAEICEAKKQNRIDELPRKKTAPEVQTLPLYWLII HHTDGALLLEKRPAKGIWGGLYCVPCFEKLDDLYTYAEHFGIVSDGLEEQTTFTHRLTHR LLMITPFQTQQRPSEHLSDGLWVSLEHLADYGLPKPLIKYLAKG >gi|241319131|gb|ACQV01000027.1| GENE 30 30462 - 30812 250 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760385|ref|ZP_04758480.1| ## NR: gi|241760385|ref|ZP_04758480.1| hypothetical protein NEIFL0001_1563 [Neisseria flavescens SK114] # 1 116 1 116 116 226 100.0 3e-58 MLNKIICALCVSLCAACGSYKAVRPDAPLPVIAQAQTYSVRYQSAQGRTITAIYINSHSP MMVELREGNTVEKLVQVRLRSQGVEYANPSSRWQIGDGFAVLIRGGKEVVFKEIVE >gi|241319131|gb|ACQV01000027.1| GENE 31 30822 - 31019 281 65 aa, chain - ## HITS:1 COG:NMA0721 KEGG:ns NR:ns ## COG: NMA0721 COG4391 # Protein_GI_number: 15793698 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 10 65 9 66 67 78 60.0 2e-15 MSTQTEKNVVVIKPQDLPLHCSGPNHETWNGHPRVFLPIQSNSEIECPYCGTYYRLDGEI PHHHY >gi|241319131|gb|ACQV01000027.1| GENE 32 31127 - 31627 576 166 aa, chain + ## HITS:1 COG:no KEGG:NMA0720 NR:ns ## KEGG: NMA0720 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_A # Pathway: not_defined # 3 164 1 162 165 207 61.0 1e-52 MIMTTLLRLQDFDTSDSASFLYTLSAAYLDHTEQAGDEEMSGLNDEQHTLTALCYLDSQV QEGGFVQLTASGYGEYIFGNPVADSLRRWRIKPIPKILDKAKALYEKHGEAIEKMADEQR DFDEIRKAFPDFEELDGDYYDVADEDLETAAAYVQANWDKFAKLSG >gi|241319131|gb|ACQV01000027.1| GENE 33 31691 - 32464 1128 257 aa, chain - ## HITS:1 COG:NMA0562 KEGG:ns NR:ns ## COG: NMA0562 COG0501 # Protein_GI_number: 15793554 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis Z2491 # 14 257 28 282 293 254 52.0 1e-67 MLKKWNKKYWAGMGVILALTGCTSVADMVGYDTATLNEDAAKSYSQVIQKARGQKALDVS SPTAQRVQRVFARLRPHAERANKTGVPFNWQMNVIRSDEMNAWAMPGGKMAVYTGIVEKL KLTDDEIAAVVGHEMTHALLEHSKKALGGQVLTGLGGSILASSTGVDGDLVGLGADLLAT KPFSRYQESEADAGGVRLMAEAGYNPEAAVSVWEKMNKVQGGSSLAILSTHPTNQARINA IRKMLPEVMPIYQKNKR >gi|241319131|gb|ACQV01000027.1| GENE 34 32573 - 33529 1143 318 aa, chain - ## HITS:1 COG:NMA0962 KEGG:ns NR:ns ## COG: NMA0962 COG1686 # Protein_GI_number: 15793919 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Neisseria meningitidis Z2491 # 35 318 29 312 312 421 79.0 1e-117 MYFFELADMKFYKTLGMVWTGVALAFASAPAVADDMDVLGQFLEQNFPVQNDPMEAFALS HADQVEAQAALAGPLLSSQSALIFNNKTGEVLYQKNPDRVMPIASISKLMSAMVVLDAHL DMNEPITITEAEIDRLKGTGSRLSIGTTLTRGELLHLSLMSSENRATHALGRTYPGGMSA FVAAMNAKAQSLGMTSSRFYEPTGLNFQNVSTARDLNRMVAAASKYPLIRKNSTSNYGSV WTANGRQNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPSST TRVNDARKIESWMLQRRS >gi|241319131|gb|ACQV01000027.1| GENE 35 33795 - 35060 247 421 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 158 390 258 436 466 99 30 6e-20 MSEEKRTCSFCGKSENDVKNLIEGEHAFICNECVETCGMMLQDNESGEIENELAKAKEEN AEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRHPKAEGKVELSKSNILLIG PTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRG IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVD TTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDENADISALFETVEPEDLIKFGL IPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLFAMEDVGLEFEEDALRSIAK LAMERKTGARGLRSIVERCLLDTMYTLPDLKDVAKVVINKEVVEKGEQPKLFREDGSEYK Q >gi|241319131|gb|ACQV01000027.1| GENE 36 35267 - 35599 509 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760262|ref|ZP_04758357.1| ## NR: gi|241760262|ref|ZP_04758357.1| putative lipoprotein [Neisseria flavescens SK114] # 1 85 1 85 110 87 100.0 2e-16 MKTLLIALATGSLMLAACSSSKTEEAAAPRITVEEAMTQCQQASGENADRAVFDACMKGK GYQRTAESAASEPAASEPVAAPEITAPEAAASEPADKAAPAKKAAKKAKK >gi|241319131|gb|ACQV01000027.1| GENE 37 35908 - 36000 68 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGRLKNLILKWTNRSMILILRFEKKWGAE >gi|241319131|gb|ACQV01000027.1| GENE 38 36033 - 37424 1738 463 aa, chain + ## HITS:1 COG:NMB1422 KEGG:ns NR:ns ## COG: NMB1422 COG0513 # Protein_GI_number: 15677281 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 2 463 3 457 457 723 81.0 0 MNPFSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS LELLKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMDK QTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQML PKQRQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRSLLE RLIVDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTLR VLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMF EAIKELTGSDLNVERIEGFEPHWWDNDNQNEAEAQPVQHNDSRSRRDDRNKRNEYANKSD KNSKKAEEKNDPGIVCGKIAGRTRRSRHERQPCALLQPGFGIK >gi|241319131|gb|ACQV01000027.1| GENE 39 37608 - 40193 3798 861 aa, chain - ## HITS:1 COG:NMA1761 KEGG:ns NR:ns ## COG: NMA1761 COG1049 # Protein_GI_number: 15794654 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Neisseria meningitidis Z2491 # 1 861 1 861 861 1681 97.0 0 MLEAYRKAAAERAALGIPPLPLTAQQTADLVELLKNPPAGEGEFLVELLAHRVPPGVDDA AKVKASFLAAVAEGSVSSPLISPEYATELLGTMLGGYNIHALIELLDNDKLAPIAANGLK HTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFTSRAKVPEKITVTVFKVDGETNTD DLSPAPDAWSRPDIPLHALAMLKNPRDGINPDKPGEVGPIKLLEELKAKGYPVAYVGDVV GTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGGKIAPIFFNTQEDSGALPIEVDVSA LKMGDVVDILPYEGKIVKNGETVAEFSLKSQVLLDEVQAGGRINLIIGRGLTAKAREALK LPASTEFRLPQAPAESKAGFTLAQKMVGRACGLPEGKGVRPGTYCEPRMTTVGSQDTTGP MTRDELKDLACLGFSADMVMQSFCHTAAYPKPVDVRTHKELPAFISTRGGVSLRPGDGVI HSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGK LQPGVTLRDLVNAIPLYAIKQGLLTVAKAGKKNIFSGRILEIEGLPDLKVEQAFELTDAS AERSAAGCTVKLNKEPIIEYMKSNIVLMKNMIADGYQDSRTLERRIKAMEAWLANPELLE ADKDAEYAAVIEINMDDIKEPIIACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRA ASKLLEGKTDIPVRLWMAPPTKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVH EGATVMSTSTRNFPNRLGKNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDQI YRYMNFNEIDSYNEVAEKVNV >gi|241319131|gb|ACQV01000027.1| GENE 40 40394 - 41317 599 307 aa, chain - ## HITS:1 COG:XF1625 KEGG:ns NR:ns ## COG: XF1625 COG2972 # Protein_GI_number: 15838226 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Xylella fastidiosa 9a5c # 103 294 156 344 346 123 38.0 5e-28 MTVSGVPYPEQIFQHFSWACPVILLILLKVYFLQAFAPSLLRSQYSVVVSYVSNLLIFLF VDLVILKTDIWSLIQHFFLLTFFCFSFMYIEAARRNSLAPSISEARLSALTARIRPHFLF NSLNAAISLIRLRPYDAETLLENLANLFRAQLRDGSQNSTLGQEIEWAQEYIAIEQIRMG HMRVQVMWQHHAPDDAETPHLLLQPLLENAVFHGVESIHRPGIITVLTKLEKSSIFISIE NPCGKEPNENTKPHKGNSMALRNLKERLTLMYDTDAKIRNIQSDGLFRVEIILPYRKKSA EVSRLFG >gi|241319131|gb|ACQV01000027.1| GENE 41 41525 - 42904 1961 459 aa, chain + ## HITS:1 COG:NMB0637 KEGG:ns NR:ns ## COG: NMB0637 COG0165 # Protein_GI_number: 15676537 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Neisseria meningitidis MC58 # 4 459 3 458 458 855 92.0 0 MSKDKTWSGRFNEPVSELVKKYTGSIDFDKRLAEWDIQGSLAHAQMLTQSGVLSEDDLSA IRQGMAEIIAEIKEGTISWSLDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATDIR LWLRDQITVIQSLIQNLQTALVDLAEQNAETVMPGFTHLQVAQPVSFGHHMLAYVEMLGR DFERMADCRKRVNRMPLGAAALAGTTYPIQREITAELLGFEQICQNSLDAVSDRDFAIEF TAAASLIMVHLSRLSEELILWMSPRFGFIDIADRFCTGSSIMPQKKNPDVPELVRGKSGR VIGHLIGLVTLMKSQPLAYNKDNQEDKEPLFDTADTLIDTLRIYADMMRGVTVKPNNMRA AVMQGFATATDLADYLVKKGMPFRDSHEVVAQAVRHADETGVDLSELPLEVLQGFSNLIS EDVYSVLTPEGSLNARNHLGGTAPEQVRFQVKRWRELLA >gi|241319131|gb|ACQV01000027.1| GENE 42 43108 - 43215 87 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVCAHAVALYCLKIMELAESAIFPGDEYGIASAA >gi|241319131|gb|ACQV01000027.1| GENE 43 43198 - 43596 344 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760371|ref|ZP_04758466.1| ## NR: gi|241760371|ref|ZP_04758466.1| hypothetical protein NEIFL0001_1576 [Neisseria flavescens SK114] # 1 132 43 174 174 255 100.0 8e-67 MSAYLHQTSSAAMQAEKSELSILQNNQNSLASCVGIESLCEHAKPGIWVEHAKFLQHKDT GKLLVLSLDYLENNDTAKTLHNRYTASLLPQADRTEAWLYAWRTFLSSIMFLMIINLTPM IFALFEQKTTSA >gi|241319131|gb|ACQV01000027.1| GENE 44 43646 - 45034 2204 462 aa, chain - ## HITS:1 COG:NMA1670 KEGG:ns NR:ns ## COG: NMA1670 COG0114 # Protein_GI_number: 15794564 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Neisseria meningitidis Z2491 # 1 462 1 462 462 873 99.0 0 MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLIYALALVKKAAAATNVS LGRIKPEQADLITQAADDVLNGKLDGQFPLVVWQTGSGTQSNMNMNEVLANRANEIAGTG LAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLIPAVKALRDTLDKKAQEFAPI VKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDALKDLYELALGGTAVGTGLNSHPE YAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAASGALKTLAASLNKIANDIRWLASG PRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTMVCCQVFGNDVTIGMAGASGNFELNVY MPVIAYNLLQSIRLLGDACNSFNEHCAVGIEPVPEKIDYFLHHSLMLVTALNRKIGYENA AKVAKTAYKNDKSLRETAIELGLLTGEEFDELVVPADMVHPR >gi|241319131|gb|ACQV01000027.1| GENE 45 45359 - 47275 2135 638 aa, chain + ## HITS:1 COG:BMEII0297 KEGG:ns NR:ns ## COG: BMEII0297 COG1629 # Protein_GI_number: 17988642 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Brucella melitensis # 109 631 183 642 649 103 24.0 1e-21 MKQNHLICLLMSSFAAANGFAETLADSDEIQPVKTFSPPKPIAPTAAQGYFPENQFDRTD RSDHYFVTENIDQAFRPLKANSGFYGKSFYNSVTAQARGAKVYGVANLNHTKANGYKDGD GNQTDWKYSRFNQALVLGFVPSENQEYRLTYLHDDINNDRQPQFVNDALDTERHIAKLNA RWGNADLSNTVSAEAGVIKLKRRADNYSLRQNNTPQQVFVELDRKVYDFSLKHDADFGKF HNTAAVSYRNDSQNGERNAHTPMRDFLNGYRFADVHIDRWRIADTLSYKFDDRHKLGLGL SYELNEADVRKNTVQPAHPMNRNLAFASAQQIWKTHYGYDFNGKVRRHALSGELKYDFTP SETQKYSVSLAHLERIGDNTERFNSLAAIVQNRMNGALMNQTPAAIAGNPLLKTERHNRI KLTADSRNDYYNGYMNSLAGAGWNVGGTLVADKVKDLIIFDRARGQSGISSNSGGIITRN VDARLFTAQAYARYNFNPHWAAGIKATYNYGYNETDGRPLYQIRPFEAAVQADYKNYFAH GSYNIGAATRFVAKQTRGDFDAANGLGIDKREAAKGFTVADVYAGVNIKDKYGLRLGVNN VFNKKYAEHISGDHVLALSPSVVYAPGRTYWLSLHAAF >gi|241319131|gb|ACQV01000027.1| GENE 46 47332 - 48309 1309 325 aa, chain + ## HITS:1 COG:AGl928 KEGG:ns NR:ns ## COG: AGl928 COG0715 # Protein_GI_number: 15890581 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 324 6 326 327 163 34.0 4e-40 MDMKRRDFLKMTAALAAAGVSPSLLAAGKEQFTVYGAPAMPSVTIAVAALQGKLAKQADV SLKIWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGMVNILTNGITQLMCKGSAI ASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVGITYTATPPEAVGLFLSKDYHA AILPEPMASAVMLKGKTMGVNVVRGFDLVKAWGQAFDTKPLIPMAGIIANEEYFHTHKAQ FDIFHQDLKNALNWILANRQSAAKIGKNYLPAPEPALVMGLDGARLTVTKGSEVKNEILK FYEILMQFNPKLLGGKMPDNGFFLA >gi|241319131|gb|ACQV01000027.1| GENE 47 48392 - 49189 463 265 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760284|ref|ZP_04758379.1| ## NR: gi|241760284|ref|ZP_04758379.1| hypothetical protein NEIFL0001_1580 [Neisseria flavescens SK114] # 1 265 1 265 265 540 100.0 1e-152 MPIKNLYWFAVLFLPLVACAPNSNVSEYKEDPSIYTAPDTVGTLGGQQVRLSDYQTDGVN YEDTPSAFDERWKTYKSPPRTLESKLEDLWIYVNVETGKINDLRKTSVDRFLNERDQPNT PWVSIRIVGLDFQPEEDWLDKDLESDLKGMGRGIERHGYKETNNTKYSLQIYANDGVDSI TGHSSTVYIARNVKGHVRTHIRCFNGNVPNPPCEHEYFISLPNKRIVFYISYNRNRLKDW RRIEDLAKHYLDTFIDNAKHPKRKI >gi|241319131|gb|ACQV01000027.1| GENE 48 49205 - 50179 985 324 aa, chain + ## HITS:1 COG:no KEGG:H16_B2313 NR:ns ## KEGG: H16_B2313 # Name: rtxA1 # Def: RTX toxin exported protein # Organism: R.eutropha_H16 # Pathway: not_defined # 28 158 27 159 2426 92 39.0 2e-17 MRQTITQKDIDRYSSMINQNKVQGAVAVYEELRQKGYGYAGWAHGVATGESVTGRAALGF LTDTANRELTQAEMDGIRIGMANGYLNALSANIKKGHGKTQTDITFEQMRNFHKDVFEKH HLSINNWTLETPMYLLGKYGGGKKAQEEVWQRLAATEGYGMDALMASMSLYNMTVEFSGG SITVNRQGRFIAHNPWDPSINLARELEKISGSGREVTISPEDKKRASSWLYHAAQYKAMG AMFAEAQQEDLQGISVHAQNTRPDLKSELSERDMDKMLEDMYASDYGQMLLENVEKQYED AVALEEQQRMQEMAQQQSRGFSRC >gi|241319131|gb|ACQV01000027.1| GENE 49 50218 - 50775 425 185 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760288|ref|ZP_04758383.1| ## NR: gi|241760288|ref|ZP_04758383.1| hypothetical protein NEIFL0001_1582 [Neisseria flavescens SK114] # 1 185 1 185 185 328 100.0 7e-89 MDDKQTNQSLMMAVHAKKRLDEAAQRMDMNSNRLLARADQIGVVVENTLDKHTSLLRDTA AEEVRKGTQEGINEFNTRLDALLKQMEDFSSFSGLAQARLEKASKSILAKAGYGLLAVLV LTAIILSGLIFYYKGVISEYRMEAELLKKYQQSAIFTCGDNLCVKTQKTNAEFRKQGLLL VAPKN >gi|241319131|gb|ACQV01000027.1| GENE 50 50886 - 51683 835 265 aa, chain + ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 264 14 259 269 135 34.0 9e-32 MIKTDKIRKPQPAVFYIIDYLWSGFAGLSVAMVVVALWAWGSAVFGEFMLPAPVEVFQKS LDLLKHFQENEIGISLWRSVVGISVALAAGLAAGLVAGSFKTAMALLKPVITILLAMPPI IWVVMALFWFGFGNPSVLFTIIVLVAPLTFASAAVGMASVNKQHEELFDAYKLGRLKKIR YLYIPHLTGYVISSIGVAVAMGVKVVIMAELLGASEGVGARIADARAMLETSTVMAYVVL VIVFVSLFEYLITKPLEILFMPWRR >gi|241319131|gb|ACQV01000027.1| GENE 51 51683 - 52375 178 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 191 1 213 245 73 27 7e-12 MLCLENVRFEILRDPIVRDFSLNLQHGEVKALFGPSGCGKTTVLRLIAGLETPKSGTIRN AFRKTGFLFQENRLPGNLTAMQNIAIFMDKPDEGEIIALAAKVGLTAGDLNKYPTELSGG MAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAMLVEKIERQGMACMLVTHDRFEA ARLSHEIMLLSTKGMNVQNVITLPTPLSERDSAFEEAVVAREFQGIHYYE >gi|241319131|gb|ACQV01000027.1| GENE 52 52673 - 53299 423 208 aa, chain + ## HITS:1 COG:SAP005 KEGG:ns NR:ns ## COG: SAP005 COG4300 # Protein_GI_number: 16119205 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted permease, cadmium resistance protein # Organism: Staphylococcus aureus N315 # 5 208 1 204 205 277 84.0 1e-74 MRCFMFSTVITAAVLYIATAVDLLVILLIFFARANTRKEYRDIYIGQYLGSVILILVSLF LAFVLHYVPEKWVLGLLGLIPIYLGIKVAIYDDCEGEKRAKKELDEKGLSKLVGIVALVT VASCGADNIGLFVPYFVTLDLVDLLVTLLVFLILIFVLVYTAQRLANISGVGEIVEKFSR WIMAAIYIGLGLFIIIENNTIRTIISII >gi|241319131|gb|ACQV01000027.1| GENE 53 53619 - 54692 1082 357 aa, chain + ## HITS:1 COG:NMA0732 KEGG:ns NR:ns ## COG: NMA0732 COG3213 # Protein_GI_number: 15793708 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 1 357 1 357 357 548 92.0 1e-156 MRPFFVGAAMLAILGALVFFISPGAIVLHRQIFLELMLPAAYGGFLTAAMLEWTGYQGRL KPVATLMAALLLAASAILPFSPQTASFFVAVYWLVLLLFCTWLIWLDRNTDNFALLMLLA AFTVFQTSYAATGDLNLLRAQVHLNMAAVMFVSVRVSILLGAEALKECRLKDPVFIPNIV YKSIAITFLLLHAAAELWLPAQTAGFTALAVGFILLAKLRELHHHELLRKHYVRTYYLLQ LFAAAGYLWAGAAKLQNLPASAPLHLITLGGMMGGVMMVWLTAGLWHSGFTKLDYPKLCR IAVPLLFIAAVSRAFLMNVNPIFFITVPAILTTAIFVLYLFTFVPIFRENAFTDDPE >gi|241319131|gb|ACQV01000027.1| GENE 54 54744 - 56387 2646 547 aa, chain - ## HITS:1 COG:NMB1388 KEGG:ns NR:ns ## COG: NMB1388 COG0166 # Protein_GI_number: 15677249 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Neisseria meningitidis MC58 # 1 547 1 547 548 1072 94.0 0 MKQLHDLPAWSKLWIHFDETKEQHMREMFEQDPERAERYWLQVGGLTLDYSKNRINDETM SLLFELAREAGVPERMQQMFHGEKINTTENRAVLHVALRNRTNAPIVVDGEDVMPKVNHV LQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPLMMCTALKPFGHPRLNMHFVS NVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNALTARKWFLDHAGDESAVAKHFVA VSTNQKAVAEFGIDTVNMFEFWDWVGGRYSLWSAIGLPIMLYLGEENFIEMLNGAHLMDQ HFINTPLERNLPVILALIGIWYINYYGGGSHVIAPYDQHLHRLPKFIQQLDMESNGKQVT LDGKAVGYETSPIIWGETGINGQHAFFQLLHQGTHITPIDLIASLEKRSNLRGHHEILLA NVFAQAEAFMRGKTPDEVRTELQAQGMDEARIEELVPHKTFSGNRPTNLILMDKINPRNM GSLIAMYEHKTFVQGIIWGINSFDQWGVELGKQLAKTILAELTGETEVQKHDSSTTRLIN LYLNANK >gi|241319131|gb|ACQV01000027.1| GENE 55 56531 - 57379 1126 282 aa, chain - ## HITS:1 COG:NMA1605 KEGG:ns NR:ns ## COG: NMA1605 COG1737 # Protein_GI_number: 15794500 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Neisseria meningitidis Z2491 # 1 282 1 282 282 491 94.0 1e-139 MLSKISESLSNLSGAERKVAESSLAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG LPEFKLALSASIGHEGMPYVHEELNADDNMSSVVEKVLGNAAASLLGERRFLKESELENA IAILMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLTEQDVLVA ISNTGSSIELLDAASIAKENGAAVIALTRNDSPLAQMADCVLSIATQENAELYTPMVSRL LQLAVIDILAIGLALRLGDTASIQLQKSKKSIHNKHIEYDKD >gi|241319131|gb|ACQV01000027.1| GENE 56 57457 - 58437 1275 326 aa, chain - ## HITS:1 COG:NMA1607 KEGG:ns NR:ns ## COG: NMA1607 COG0837 # Protein_GI_number: 15794501 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Neisseria meningitidis Z2491 # 8 326 10 328 328 560 86.0 1e-159 MSTMHTEAYPRLIADIGGTNARFALETAPQVIEKAEVLPCKDYDTIVDAAKTYLERAGSP KVLHAAFAIANPILGDWVQMTNHHWAFSIETTRQALGFETLILLNDFTAQALAVTQTDKK DLIQIGGQKPIEFAPKAVIGPGTGLGVSGLVHSAAGWVALAGEGGHASFPPFDDMEVLIW QYAKNKYGHVSAERFLSGAGLSLIYEALAKRDNIKQCRLKPSEITDKALSGTSPICRQTL DIFCAMLGTVASNLALTLGARGGMYLCGGIIPRVLDYFKTSPFRSRFENKGRFEAYLAAI PVYVVLSEFPGIVGAAAALDNHLNNV >gi|241319131|gb|ACQV01000027.1| GENE 57 58418 - 59128 179 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 19 228 14 207 228 73 29 5e-12 MKGRNMFVWLEQENAATAAQALADAVAVALQAALNEKGHAVLAVSGGRSPIAFFEALSKK DLNWQNVGITLVDERIVPTTHADSNTGLVREYLLKNNAAVATWIPVVEDGKSETELQPEV VVAYALKHYKQPDVLVLGMGGDGHTASLFPQAPQLQAAINEANDPTLIHTTPVTAPHERV SMTLGAIAKTPNVFLAIQGAEKKAVFDKAAARADTEYPTSLILNHQGINCHVYYAH >gi|241319131|gb|ACQV01000027.1| GENE 58 59177 - 60622 1915 481 aa, chain - ## HITS:1 COG:NMB1392 KEGG:ns NR:ns ## COG: NMB1392 COG0364 # Protein_GI_number: 15677253 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 481 1 481 481 895 90.0 0 MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILGVSRSELDTAGFLSKVE TNSKIHVKQNFSDEAWASFIQRIEYLKVDVTEKGDFIALGDLVKARKNTENVVIYLSTAP KFFAQACENLAEIGLNADNVRVVLEKPLGTDLASSQQINTDVARYFKEEQIYRIDHYLGK ESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGVEERGEFYDITGALRDMVQNHLM QMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTIESVNENVIRGQYVAANGMNGYLEEV NVPQDSFTETYVAIKAEIENERWKGVPFYLRTGKRMAGKVAEIVLNFRPLQNHIFDNSQP APNRLVIELQPTESIRLYTQVKTPGAGNKVEVTPIGVDLGTAVEGRRAEAYERLLLDVIN GKLALFNRRDELEAAWEYVMPILENWANNTTPPHAYEAHSWGPEAARALLARDGNKWHEE Q >gi|241319131|gb|ACQV01000027.1| GENE 59 61104 - 62939 2920 611 aa, chain + ## HITS:1 COG:NMB1393 KEGG:ns NR:ns ## COG: NMB1393 COG0129 # Protein_GI_number: 15677254 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Neisseria meningitidis MC58 # 1 611 1 611 611 1207 97.0 0 MTPTPIHPKLAEITERIIERSRPTREKYLAKIRSAKQMGRLERNQLGCSNLAHGYAAMPK SIKIEMLQDTVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQKNGATAQVAGGTPAMCDG ITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVCDKIVPGLMIGALSFGHIPGI FVPAGPMSSGIGNKEKARTRQLFAEGKVGRDALLESEMGSYHSPGTCTFYGTANSNQMMM EMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIKNGTIKPLGEMLTEKSFINALIGLM ATGGSTNHTMHLVAMARAAGVILNWDDFDEISSIIPLLIRVYPNGKADVNHFTAAGGLPF VIRELLDAGLLHDDVDTVVGYGMRHYTKEPFLIDGKLEWREAPETSGNDDILRKADNPFS PDGGLRLMKGNIGRGVIKVSAVREGCRIIEAPAIVFNDQREVLAAFERGELERDFVCVVR YQGPRANGMPELHKLTPPLGILQDRGFKVALLTDGRMSGASGKVPASIHMTPEALMGGNI AKIRTGDLIRFDSVTGELNVLIDEAEWNAREVERIDLSANQQGCGRELFANFRSMTSSAE TGAMSFGGEFA >gi|241319131|gb|ACQV01000027.1| GENE 60 62985 - 63668 1180 227 aa, chain + ## HITS:1 COG:NMA1611 KEGG:ns NR:ns ## COG: NMA1611 COG0800 # Protein_GI_number: 15794505 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Neisseria meningitidis Z2491 # 16 227 1 212 212 369 96.0 1e-102 MLMTLLRYSPQRRPKMSKLTPREILTAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEIT LRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVENAGAVFAISPGLHESLAKASHTS GIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTGGISLA TAPEYLALPNVLCVGGSWLTPKEAIKNKDWDTITRLAREAAALKPKA >gi|241319131|gb|ACQV01000027.1| GENE 61 63731 - 65335 1429 534 aa, chain - ## HITS:1 COG:no KEGG:Rpic_4119 NR:ns ## KEGG: Rpic_4119 # Name: not_defined # Def: amine oxidase # Organism: R.pickettii # Pathway: not_defined # 1 534 1 539 540 409 43.0 1e-112 MLTRRQFLSYTATLGAASAFSWQTYKYLNRKPPVSINRVGLPLGHLLRDGELLNQPTRRY ECNTLILGGGAAGLGALWYLVKHHHRDVLLAEGFERNGNNAAYTSSDGLKAPSGAHYLAL PSKESVYVREMLADFGILQPDGSFRETDLVYAPESRLLYQDKWVGHLLPKEDADSKRFFD LIGRLKQAYGNDGKKIFAIPIALSSADETWRKLDNLTFKQWLEQEGYTSPELLWYLDYCC RDDYGQGIGQVSAFAGLHYFAARNSAETVLTWPEGLAHLSESLRRHAGLQEGWQWPSESS IRLEKPASVNASAVKIKPLSDGRIEVWLHDNAKGETVAVTAQHVISAMPLMVAARIIESP EQFGLDIPEYAPWLVSNFELHSFPKEKNNSELAWDNVVYGSQGLGYVVATNQLIRVARPE RTIFTAYAALNHDTPQAVRRQLLEASDEELLQLAAQDLLTAYGEGFWWHVSHVDITVRGH GMSVPKPGYLSNEALLKIRNRNSGLLFAHSDLSSYSVFEEALYWGVEAARKVLA >gi|241319131|gb|ACQV01000027.1| GENE 62 65402 - 65617 156 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760312|ref|ZP_04758407.1| ## NR: gi|241760312|ref|ZP_04758407.1| hypothetical protein NEIFL0001_1596 [Neisseria flavescens SK114] # 1 71 1 71 71 83 100.0 5e-15 MAVSLCALVWIWVSDRYKNDRDYEEERVGTIIFFAFIIFLTVLFNYVQAEDSDSSHSGSG GSYHGYSAGHK >gi|241319131|gb|ACQV01000027.1| GENE 63 65664 - 66047 340 127 aa, chain - ## HITS:1 COG:RSp1293 KEGG:ns NR:ns ## COG: RSp1293 COG1586 # Protein_GI_number: 17549512 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Ralstonia solanacearum # 6 114 19 136 140 99 51.0 2e-21 MTHMPGNHGLLDLYGCDEAILKDEGRLKTALAAAAQAAEATILTEHFHTFGGAGGVTGVL LLAESHISIHTWPEHHFAAIDAFICGGMKLEKVKEILRRELAAERAVWTVARRGEGILGD IQPAVEQ >gi|241319131|gb|ACQV01000027.1| GENE 64 66044 - 67738 1388 564 aa, chain - ## HITS:1 COG:no KEGG:Rpic_4123 NR:ns ## KEGG: Rpic_4123 # Name: not_defined # Def: putative transmembrane protein # Organism: R.pickettii # Pathway: not_defined # 7 478 2 451 481 312 37.0 2e-83 MSQTPFFKTDCPSCGAPVEAHSASAVTLVCGYCNSMLVRQDNGVVDSGRDSALLEDFSPL QIGTSGTFVAQRFTLVGRLQVQYDDGAWNEWYALFDDGRAGWLSEAGDLYVMTMPVEVDN PPKFEDTRAGFSELTFQDKRYIASDVRKISLKRAAAQGELPFVLKEDTENRVSDWRCENL FITLDYNNKTPEAFFGRMVNLDDLKLENTRHEDEIKESAGRLKGSITSENCPNCGSSIHW VNGLTSHLNCQSCGSELAVGKDKAELITANNLRLSQNTLFTLPIGSTGRLKNKEFHVIGA IRYLETDAQETFDNLFKGAKHTLAPEGQWTEYLLYNPTQGFLWLVEADEGWNISETLNDW PRLDRNRQPQGYGKLYDYGGRVRIASGAFYWRVRNGDLNYYSDYRDGQSRKLGSELNSHE MAWSRSTPIAYREIADAFNLTNKISSYTVKMSADDIDEKLRLLMIAILVIVNIPSLFMNG FDILFDIFLIGWGVYALFIVGRKRDENGEQSISRVGYVICAMALIVFVTMMNYADLSDLD DDGSRVHSGGSYGGYSSGYSGGHK >gi|241319131|gb|ACQV01000027.1| GENE 65 67942 - 68955 1252 337 aa, chain - ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 3 337 5 340 343 360 59.0 2e-99 MFNFIKKQFIDVIQWPNPDDSLLMWRFPIADEEIQNGASLTVREAQMAMFVDEGVTADVF GPGRYTLNTQTLPVLTNLKNWDKLFESPFKSDVYFFNTKQQLARKWGTSQPVTVRDAEFG AVQLRSFGMYSYRISDPAKFFKEVSGVAAQYSGVDLENQLRNIAVTQLAAAFGSSGIPFL DMAANQVLLSQKIGELLGAEFTKLGLALENFTVESITLPASIQAALDKKISMGVIGDLGR YTQYQTAESIPLAAQNEGGLAGIGAGLGVGAGIGQVMAGAMSGMMQPNAQQAQQNVQPAT EDPQAKLVKLKSLLDGGLISQEDFDKAKAEVLKQLIG >gi|241319131|gb|ACQV01000027.1| GENE 66 69006 - 69404 561 132 aa, chain - ## HITS:1 COG:STM4374 KEGG:ns NR:ns ## COG: STM4374 COG3766 # Protein_GI_number: 16767620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 5 132 4 131 132 82 39.0 1e-16 MSISLSQYLLYLQYMLAGVAMTVVFGAVYLRITPAEELRLIKNGNLACALSFGGALVGFC LTLASSIAHSVSFIDFILWGLAAAVIQIFVYFAATMMIKGATAELIGNNVAVGALFGAVS ISIGILNAACLT >gi|241319131|gb|ACQV01000027.1| GENE 67 69610 - 70362 1141 250 aa, chain + ## HITS:1 COG:no KEGG:SSA_1740 NR:ns ## KEGG: SSA_1740 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 248 11 257 261 286 62.0 7e-76 MSILAAIRPKEPLLHLRWFDMLIVTAILFGQFAYRSTQLYIASLMPQVETASATEEVRDT AVTGVAYSENMSLQLTLLAIALVYLVIRRFDFKQLPIRFNLGVLFWTPVIFILMGLTADA VTSLSGGYNYFTTEIFQYIKPLSIFDKFAALAPMAILYGLLNGFYEEFCFLGLLTCVEDK YKWQALAYSTLVRVSFHTYQGMLWATVIGVVFGLMYYFFYKYKVKNLLPFFLIHALADIF GSGFIYLICA >gi|241319131|gb|ACQV01000027.1| GENE 68 70436 - 70783 389 115 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1838 NR:ns ## KEGG: Vpar_1838 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 25 114 3 91 95 74 44.0 1e-12 MKVSNISAVLLSALFSVAVSAAPLGEVSSENGKIFSGENYMVVKKDMKKGEQIKPHDHPG FKTLIFAVGKGSFDVTLNQTEKHTVGAGSVLRFGGDAVIEAVATEDADVAITLIK >gi|241319131|gb|ACQV01000027.1| GENE 69 70957 - 71847 1343 296 aa, chain + ## HITS:1 COG:NMA1785 KEGG:ns NR:ns ## COG: NMA1785 COG0697 # Protein_GI_number: 15794678 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Neisseria meningitidis Z2491 # 1 293 1 293 300 325 64.0 5e-89 METVRKDPLGSAWVVIAALSFTVMNLSVKAASTHFGFSSGELVFWRMLVSTLFLGIMAKA QGNTFSTPHWKTHLNRSVIGTLAMMCTLYSVIHLPLATGVTLNYTSSIWLAIFSFFILKE RITLYTQAILVMGFIGVILLLNPSFQGGQEFAALVSLAGGAMSGWAYLQVRELSLLGEPG WRVVFYLSLTGLIMSAIWSCFTGWHPLTASSLPYLAGIGISAMIAQLAMTRAYKVGKKFT VASLSYLTVVFSALSGVLLFGDKITWQEAAGMVIIVAGGVFSSFTPASIKKFLMKQ >gi|241319131|gb|ACQV01000027.1| GENE 70 71866 - 72222 707 118 aa, chain + ## HITS:1 COG:no KEGG:CV_1536 NR:ns ## KEGG: CV_1536 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 1 112 1 112 118 124 56.0 1e-27 MISIREQSYGLNVALYNEFTLDDFRQLEEALLAAKQKVHLPDILLDLSMLKDFTIDMAVE QIKFLNQHETDFGRVAVITDDIWIKLGARLSSLLTNQHPKYFSDATEAQAWLLASNLK >gi|241319131|gb|ACQV01000027.1| GENE 71 72380 - 74098 2513 572 aa, chain - ## HITS:1 COG:NMB1506 KEGG:ns NR:ns ## COG: NMB1506 COG0018 # Protein_GI_number: 15677359 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Neisseria meningitidis MC58 # 1 572 1 572 572 1053 95.0 0 MNLYQTVEREAQAAFAAAGLSDSPVVLQAAKNPDFGDFQINGVMGAAKKAKQNPRELAQK VAEALADNAVIESAEVAGPGFINLRLRPDFLAQNIQTALNDARFGIAKTAQPQTVVIDYS SPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDN AAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQA VYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAA FIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPED AKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG KTVGIGAVKYADLSKNRTSDYVFDWDAMLSFEGNTAPYLQYAYTRVQSVFRKAGEWDTNE PTVLTEPLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRFYEACPILKSEG ATRNSRLQLAKLTGDTLKQGLGLLGIDVLNVM >gi|241319131|gb|ACQV01000027.1| GENE 72 74252 - 74788 589 178 aa, chain + ## HITS:1 COG:AF2335 KEGG:ns NR:ns ## COG: AF2335 COG1335 # Protein_GI_number: 11499916 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Archaeoglobus fulgidus # 9 178 4 169 170 112 38.0 3e-25 MNPKNTLCLIVDIQERLLPALSGADEMLERCRLLIQGLTALDVPFAVTEQYPKGLGNTVS AVSLLLPEGTPVVEKTRFSAFLPEIQEILRKNDIKNVILVGAEAHICMLQTALDLKAQGY AVSLPFECTASRTTANRDNGLAQLSRQGIIISNVESILFQLLGDAKHPAFKTISKLIQ >gi|241319131|gb|ACQV01000027.1| GENE 73 74802 - 75302 746 166 aa, chain + ## HITS:1 COG:BS_ywnH KEGG:ns NR:ns ## COG: BS_ywnH COG1247 # Protein_GI_number: 16080709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Bacillus subtilis # 4 164 2 162 163 158 46.0 4e-39 MQYTIRPALRQDLPAIVDIYNSTVATRQSTADLSPTTVAEREIWFAAHTDKRPIYALYDT DGTVLAWGSFSDYHPRYAYHISAEVSIYVRHDMRGAGVGKILLRHMLEHAPSLDIHNVIA LVFGHNYPSLNLFHRFGFKEWGRLPQVCDLETMLTDVVILGKRIVD >gi|241319131|gb|ACQV01000027.1| GENE 74 75359 - 76228 1238 289 aa, chain - ## HITS:1 COG:NMB1617_2 KEGG:ns NR:ns ## COG: NMB1617_2 COG0500 # Protein_GI_number: 15677467 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 99 289 1 191 191 317 79.0 1e-86 MNEQQELFCYKQMPVWTADEIPEALLSKHNTAAGTWGCLNVLQGRLNFNEVDEAGNITAT HELTPESDDWIIHPQAWHFIAPQTQDTEIQLSFYCEAADYFNKKYGMSATHSAVRAAEGI VPVGKVLDMGCGQGRNALYLGLKGFDVTAVDNNPNAVQNVEELARIEELNVRAFEYDLNA ANIQENFDYMVATVVFMFLMPRYVPDVIANMKEHTNPGGYNLIVSAMDTEDFPCPMPFPF KFGEGELREYYKDWELVEYKEELGSMHAKDEFGNPIQFKFVTMLAKKPE >gi|241319131|gb|ACQV01000027.1| GENE 75 76241 - 76630 459 129 aa, chain - ## HITS:1 COG:no KEGG:SSU05_1576 NR:ns ## KEGG: SSU05_1576 # Name: not_defined # Def: superfamily I DNA/RNA helicase # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 125 14 138 140 199 80.0 2e-50 MGLFSGLLGNASQKDADAVERDLANILIDGEQVKMAFSLVRDLIVFTEYRLVLVDKQGLT GKKVSYRSIPYRSVSRFSVETSGHFDLDAELKIWVSSGEAPTETLQFKSDKSVIAIQKAL AEAVLKPLK >gi|241319131|gb|ACQV01000027.1| GENE 76 76750 - 77187 694 145 aa, chain + ## HITS:1 COG:NMA1817 KEGG:ns NR:ns ## COG: NMA1817 COG0328 # Protein_GI_number: 15794707 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Neisseria meningitidis Z2491 # 1 145 1 145 145 248 84.0 3e-66 MDKPVYLYTDGACKGNPGAGGWGVFMRYGTHEKELFGGEAETTNNRMELTAVIEGLKSLK RRCQVVICTDSQYVKNGMESWIHGWKKNGWKTAAKKPVKNDDLWKELDSLVQQHDVRWTW VKGHAGHPENEKADELANQGAAKFA >gi|241319131|gb|ACQV01000027.1| GENE 77 77198 - 77296 58 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTALRHLKPLFGIAVIALICVTTLRVPKNVTT >gi|241319131|gb|ACQV01000027.1| GENE 78 77436 - 77834 524 132 aa, chain + ## HITS:1 COG:NMB1619 KEGG:ns NR:ns ## COG: NMB1619 COG0537 # Protein_GI_number: 15677469 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis MC58 # 3 131 6 134 134 220 80.0 5e-58 MTCPICTADNEDILLQTPNLRVIAVHNEAGAPAFCRVIWNDHVSEMTDLSPAERNEIMEM VYQVEAAMRQVFRPAKINLASLGNVVPHLHWHVIARFENDANFPAPIWAAPVREHGMALP ENWPQQIKNLIA >gi|241319131|gb|ACQV01000027.1| GENE 79 77908 - 79101 1898 397 aa, chain + ## HITS:1 COG:NMA1819 KEGG:ns NR:ns ## COG: NMA1819 COG1619 # Protein_GI_number: 15794709 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Neisseria meningitidis Z2491 # 4 397 5 394 394 575 74.0 1e-164 MNSTTRRHFLRTCSAAAGAGLLQACGTGTTTTPQTKTTSTTAKAQTVQPKQPHPPRSGDN LLRVVAPSGFAEDPNRVTTGLTRLYNAGFTVTNQQAGSRRYQRFAGSDAQRAADFQDVAS GRVETPKVLMGLRGGYGAARILPQIDFASLGARMRERGTLFFGFSDVCAVQLALLAKGNM MSFAGPMVYSEFGKADPSVFTMDSFIRGTTNNVNIVDVPTIQRADVNVEGTLWGGNLSVL ASLAGTPYMPDIQGGILFIEDVSEQPYRIERMLNTLYLSGVLQKQRAIIFGDFRMGTIRD VYDSSYDFSAVVNHISRTAKIPVLTGFPFGHITNKTTFPLGAHAKVRSTGNGGYSVTFSS YPTLNPSALTLNNLLPPPVPTYDSTIYRDSITEEVTE >gi|241319131|gb|ACQV01000027.1| GENE 80 79164 - 80270 1226 368 aa, chain - ## HITS:1 COG:NMA1894 KEGG:ns NR:ns ## COG: NMA1894 COG1932 # Protein_GI_number: 15794779 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 368 1 368 368 689 88.0 0 MSAHPIYNFSAGPAVLPEAVLRTAQQEMLDYNDTGFPVMAMSHRSDMFLSILHHAEQDLR QLLNIPSNYKILFLQGGATTQFNMVAMNLAHGFATADAVVTGNWSRIAYEQMSRLSNAEI RLAAHGGEQYAYKNLPAVEDWDVNPNSAFVHFAINETVNGLQYQNVPKLSDGLPPLVCDM SSEILSREFDVSDYGLIYAGAQKNIGPAGATVVIIRDDLLERCPNDIPDVFNYRSHINRD GMYNTPSTYAIYMSGLVFRWLQTQGGVKKIEAVNRIKAQTLYETIDGSGGFYINDIHPDA RSKMNVVFKTASEDLDRRFVLEAELQGLCLLKGYKTVGGMRASIYNAMPLEGVNTLADFM KDFQRRYG >gi|241319131|gb|ACQV01000027.1| GENE 81 80595 - 81044 698 149 aa, chain + ## HITS:1 COG:NMA1895 KEGG:ns NR:ns ## COG: NMA1895 COG0779 # Protein_GI_number: 15794780 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 149 1 149 149 272 91.0 2e-73 MYFWRSMDIQSILDKTLPGLGYELVDFELTAQGDLRVFIDKEGGITVEDCATVSNHLSRV FMVEDIDYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCEND IVTVSFDGKTAQIELSNIDKARLRPEFKF >gi|241319131|gb|ACQV01000027.1| GENE 82 81073 - 82578 998 501 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 499 9 516 537 389 43 1e-107 MSREMLQLAEALASEKNVETEVVFKALEFALSTAAKKKADREHMDVRVEIDRDTGEYQTF RRWLIVADEDYTYPEVEKTIEEIQEEIPGTTIQIGEYYEEQLPNEGFGRQAAQTAKQIIL QRIRDAEREQNLNEFLASKEDIVSGTVKRVERHGIIVEVVAGKLDALIPREEMIPRENFR SGDRIRALFLRVDEIGNTGRKQVILSRTSGDFLAKLYANEVPEIADGLLEIREVARDPGQ RAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSGERIDIVLWSPEPAQFVMNALSPAE VSRIVIDEDKHAVDVIVDENQLALAIGRGGQNVRLASILTGWQLNIMTVEEADERNAAED AVIRNLFTTHLNIDDETADILVEEGFATLEEVAYVPAAELLSIDGFDEEIVETLRNRARD AILTITIAAEEKLGEVSEDMRNLDGVDSDMLRKLAEAGVTQRDDLAELSVDELVEITGVD EEEAKKVILAAREHWFTEENN >gi|241319131|gb|ACQV01000027.1| GENE 83 82590 - 85484 4771 964 aa, chain + ## HITS:1 COG:NMA1897 KEGG:ns NR:ns ## COG: NMA1897 COG0532 # Protein_GI_number: 15794782 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Neisseria meningitidis Z2491 # 1 964 1 962 962 1235 85.0 0 MSNTTVAQFAAELNRPVDDLLKQLKEAGVNKNSGNDSITTDDKQLLTAYLQKKNGSNSGT ISIRRKKTEISTVDGVKVETRRRSRAVTIPSSEELAAEAKAKVAAKNQKAEAEKVAAQAA EEKAKTEAEAAAKADARAKAEAEAARLKAAKAAPKAEDKPVAAKKEEAKPVEAVEAKAEA KVEAKADNKPSEKSVEAEKPVEAKKPAKAKQDKGGKGKEAKKAAKPAAPAVPQPVVSEEE QAQRDEEARRAAALRAHQEALLKEKQERQARREAIKQQAVQDSKPTKEAKSGERHKPAEK AKAASGEGKSEHNARGKKEDRRDRDEENQGRNAKGKGGKGGRDRNNARNGDDERVRGGKK GKKLKLEPNQHAFQAPTEPVVHEVLVPETITVADLAHKMAVKGVEVVKALMKMGMMVTIN QSIDQDTALIVVEELGHIGKPAAADDPEAFLDEGVEAVEAEALPRPPVVTVMGHVDHGKT SLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITFLDTPGHEAFTAMRARGAKATDIV ILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDKEAANPERIRQELTAHEVVPDEWG GDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVDAPAKGIIVEARLDKGRGAVATLL VQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGPSIPVEILGLSDVPNAGEDAMVLA DEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGENQAQSLSVIIKADVQGSYEALA GSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAFIIGFNVRADASARKLAENENVEI RYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRD SHVRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECGLMIKGYNEIMEGDQLECFDIVEV ARTL >gi|241319131|gb|ACQV01000027.1| GENE 84 85834 - 86022 254 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261379743|ref|ZP_05984316.1| ## NR: gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain protein [Neisseria subflava NJ9703] # 1 62 1 62 912 115 95.0 1e-24 MTIEKAMRIRNAQFELRHLEQLQPSPLAQATTGTSGDDVYYVTRSDDKIIENPNGRDDTV YS >gi|241319131|gb|ACQV01000027.1| GENE 85 86019 - 86198 226 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261379743|ref|ZP_05984316.1| ## NR: gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain protein [Neisseria subflava NJ9703] # 1 59 854 912 912 92 93.0 8e-18 MKTGDDWVLTIKDTGDTLTIHDIANNNVDSFVFENGKSYTADEINKALITENTQNNSIL >gi|241319131|gb|ACQV01000027.1| GENE 86 86309 - 86866 781 185 aa, chain + ## HITS:1 COG:NMA1891 KEGG:ns NR:ns ## COG: NMA1891 COG0778 # Protein_GI_number: 15794777 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 317 81.0 7e-87 MDALNLLTTRRSSKKLTAPAPNAEQLEQMLQAATQVPDHGNMRPYRFTVIQSETGLQRFR ELLSNTVTELNFGDDAMKKAERVGNMAPMIIGVTFTPNREVAKPKPEWEQMLTAGCAAYA LQLAASAQGFDNVWITGMWVNSPLLREAFECADKDKIIGLMMIGSPTEEGGGPKNTNLEC FTTYW >gi|241319131|gb|ACQV01000027.1| GENE 87 86946 - 87827 1053 293 aa, chain - ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 1 284 29 317 326 147 33.0 2e-35 MKVTSFGEVLWDDFPNGKVLGGAPLNVTVRLQSLGIDTAIISRRGDDADGEELLRQIQSK NVNTDYLQVCHECATSLVKVHLDKCGSASYEIVYPCAWDRIAVDDAAIKRVAESDAFVFG SLATRDEVSHKSLAVLLKEAKFKIFDVNLRKPHYDIDRLLETMKQSDMVKLNDDELYELA AAYGSPYHSIEQNISYLVELTGVKILCVTLGSHGAVLYKDGELYRHCGFRVKVVDTVGSG DSFLGGLTYKLLNNAPPQEAIAFACALGALVASRHGATADISLEEIEAFMYPA >gi|241319131|gb|ACQV01000027.1| GENE 88 88153 - 89088 1298 311 aa, chain - ## HITS:1 COG:NMA0813 KEGG:ns NR:ns ## COG: NMA0813 COG0341 # Protein_GI_number: 15793786 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Neisseria meningitidis Z2491 # 1 311 1 311 311 557 95.0 1e-158 MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTKGLNFSVEFTGGTVMEVQYQQGVD VNKTRERLDTLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQLSNQVMDLLKKDNPDVTLR QVEFIGPQVGEELVTNGLMALGFVVAGIIIYLSMRFEWRFAVSAIIANMHDIVIILGCFA FFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRKPHMRGHTVPEVIDNAITATMSR TIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVFGIYSSVLVASPLLLMFGLSRENIA KEVKKKEEVVV >gi|241319131|gb|ACQV01000027.1| GENE 89 89092 - 90945 2352 617 aa, chain - ## HITS:1 COG:NMA0812 KEGG:ns NR:ns ## COG: NMA0812 COG0342 # Protein_GI_number: 15793785 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Neisseria meningitidis Z2491 # 1 617 2 618 618 1114 92.0 0 MNRYPLWKYLLIAFTIVVAAVYSLPNLFGETPAVQVSTNRQAIVINEQTQSKVSSALQSA GIQTDGMFIVDNSLKVRFKDTETQLKARDVIENTLGEGYITALNLLADSPEWMAKIKANP MFLGLDLRGGVHFTMQVDMKAAMQKTFERYAGDIRRELRREKIRTGTVHQAENGLTVPLQ DAADVQKALPQLQKMFPEATLVADGNNIVLTLSEEAINKVRSDAVKQNINTLHNRVNELG VAEPVIQQSGLDRIVVQLPGVQDTAKAKDIIGRTATLEVRMVEDDPIKLQEALNGNVPTG YELLSSGGDHPETILVNKQVELTGDNINDAQPSFDQMGAPAVSLSLDSAGGSIFGELTSA NVGKRMAMVLIDQGKSEVVTAPVIRSAITGGRVEISGSMTTAEANDTSLLLRAGSLAAPM QIVEERTIGPSLGKENIEKGFNSTLWGFAAVAAFMVIYYRLMGFFSTIALSTNILFLVGI LSAMQATLTLPGIAALALTLGMAIDSNVLINERIREELRGGIPPQQAINLGFQHAWATIV DSNLTSLIAGIALLVFGSGPVRGFAVVHCIGILTSMYSSVVVFRALVNLWYGRRRKLRNI SIGAVWKPKAEMAEGKE >gi|241319131|gb|ACQV01000027.1| GENE 90 91021 - 91287 494 88 aa, chain - ## HITS:1 COG:NMA0811 KEGG:ns NR:ns ## COG: NMA0811 COG1862 # Protein_GI_number: 15793784 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Neisseria meningitidis Z2491 # 1 88 1 88 88 135 89.0 3e-32 MNQAVAQFAPLLLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGDKVVLAAGFKGRVTKVG EQFYTVDIGQGARIEVEVERNAIAAKAE >gi|241319131|gb|ACQV01000027.1| GENE 91 91465 - 92523 1260 352 aa, chain + ## HITS:1 COG:NMA0810 KEGG:ns NR:ns ## COG: NMA0810 COG0123 # Protein_GI_number: 15793783 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Neisseria meningitidis Z2491 # 2 352 19 379 385 497 65.0 1e-140 MLKKIIWRVRTLLRRLLGKNARTVWISHPIFLQHQPGTNHPDKPERISAIQAALKKEGIW RHLQTAEALEIKDAQLALVHSRNYLHELEAAQPLPGKIHRIDDDTVICHDSLKAARFAAG AVVKAVDMVMNKKAWHAFCAIRPPGHHAHSNSASGFCLVNNTAAGVMHAIAQYRLQRIAV IDFDAHFGDGTAEILRDDPRVMFFNLFETDIFPFPEAEQYAGSKNMLHTPLKPGTGSRIF RTTIREQWLPKLEAFRPELVLLSAGFDGHKQDETGRLNLHEADFAWLTHKIVQATASCQG RVVSVLEGGYTLESMSKSAAAHIRVLAGLSKADYVIAYQKHLKRGKSNNPTQ >gi|241319131|gb|ACQV01000027.1| GENE 92 92756 - 93820 1928 354 aa, chain + ## HITS:1 COG:NMA0808 KEGG:ns NR:ns ## COG: NMA0808 COG1063 # Protein_GI_number: 15793782 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 354 1 354 354 664 98.0 0 MKAARFYNKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEFMEGPIFIPPCGHPHPI SGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRDDVPTGEGSNYHLSKDMNF IGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLSVGHHAYVRSGAKAGDVALVG GAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGVADYILDPSEVDVVEEVKKLTNG EGVDVAFECTSVNKVLDTLVEACKPTANLVIVSIWSHPATINVHSVVMKELDVRGTIAYC NDHAETIKLVEEGKINLEPFITQRIKLDELISEGFERLIHNNESAVKIIVNPNL >gi|241319131|gb|ACQV01000027.1| GENE 93 93939 - 95081 1698 380 aa, chain + ## HITS:1 COG:BS_yqiG KEGG:ns NR:ns ## COG: BS_yqiG COG1902 # Protein_GI_number: 16079477 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Bacillus subtilis # 1 368 1 369 372 350 47.0 3e-96 MNPKYATLFQTYTLNNGVTIKNRLVVAPMTHFGSQADGLISDQERTFLSNRAGDMGMFIT AATLVQKDGKAFHGQPEATGEHCLDSLKETAQILQQQGAKAILQIHHGGSKAMDDLLDGL DKISASASEAEHAREATAEEVEALIASYAQAADLALRAGFDGVEIHGANTYLIQQFYSAQ SNRRNDQWGGSLENRMRFPLAVIDAVVAVREKHQRDDFIIGYRFSPEEPGDDGLTMTETG ALIDALVQKPLQYLHVSLWEFDKKIRRGGDTAQTRMQFIHERINGKLPLIGVGNLFTADQ ILAAYETGWAEFIALGKTVMINPHIATQIREGREDEIETQLNPTRADHYGLPDTLWGFAS SGTQSWLPPVKGAEWKPMDI >gi|241319131|gb|ACQV01000027.1| GENE 94 95295 - 96890 2159 531 aa, chain + ## HITS:1 COG:NMB0626 KEGG:ns NR:ns ## COG: NMB0626 COG4108 # Protein_GI_number: 15676528 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Neisseria meningitidis MC58 # 1 531 1 531 531 1082 99.0 0 MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWME IEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEA QTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENILKIRCAPVTWPIGMGKNFKG VYHILNDEIYLFDAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFN LDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEPKFSGFIFK IQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAG DIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEE GAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCEDKKKL AEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPNIVFHETREHSVKL >gi|241319131|gb|ACQV01000027.1| GENE 95 96940 - 97710 662 256 aa, chain - ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 7 253 3 248 252 179 44.0 6e-45 MLADSFFYYLVLVGFAAGLMDAVVGGGGLLQIPGLFNLLPNATPVASVMGVNKFASCCGT LTATGQYLRRIPVPWKMLLPAAALAFAASYLGAKTVVYFPVQYMKPAMLVIMIAMCLYTF LKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGVFGPGTGSLLAFVFVRFYGYDFLAAN ASAKVINSTTNLAALTFFIPQGHVVWAWAIPLAVANLCGGVVGARLAIRGGTKLLRYGFM LLLCLTIGKFAWDLLG >gi|241319131|gb|ACQV01000027.1| GENE 96 97830 - 98780 1439 316 aa, chain - ## HITS:1 COG:NMA0046 KEGG:ns NR:ns ## COG: NMA0046 COG0385 # Protein_GI_number: 15793077 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Neisseria meningitidis Z2491 # 1 315 2 316 318 442 84.0 1e-124 MNFLTAISRQMTRFTALIIVLASIIAFIEPATFSWVKGDTQVVVLGIIMLGMGMTLGKED YQILAQRPLDIFIGAIAQYTIMPLLAIGIARTFDLSPGLTLGLVLVGTCPGGVSSNIMSF LAKGDVAFSVGMTTVSTVLAPVMTPLWMTYLVGQTVEMDGWGMFKFMLLVTLLPVVIGSA ANILLHKKHWFEDVRAIMPAVAVVAFACIVGGVAAVHGHRFAESAFVMVLAIAAHNIGGY ILGYYSGALTGMNTAKKRTLAIEVGVQNAGLATGLSAKFFPGNAESAVAAAVACVWHSVS GTVLGNLFAWWDKRKQ >gi|241319131|gb|ACQV01000027.1| GENE 97 98987 - 99874 1371 295 aa, chain - ## HITS:1 COG:NMB0711 KEGG:ns NR:ns ## COG: NMB0711 COG1561 # Protein_GI_number: 15676609 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Neisseria meningitidis MC58 # 7 295 6 294 294 408 76.0 1e-114 MATRRTIQIHSMTGFANAAGECGGKRINLEIRAVNHRYLDVQFRMPEELRYLEGALREQI AAAVARGKLECRVQLQDAASGGQTLEVNQDLVAQLAHLNKEWRKEHNFGKLSVADVLRFP GVLAGQSEDSEALAKGVKDLLTDALKEFTAARKREGKKLGEHLLQRLTAMEEIVDALNEL FPSLLQAHMDKVKARLAEAVGNIDNDRLQQEFALFIQKSDVDEEFSRLRTHIAEVRRIVT EGKGSAGKRLDFLMQELNREANTLGSKAIAAECTQASVELKVLIEQMREQVQNIE >gi|241319131|gb|ACQV01000027.1| GENE 98 100013 - 100741 1003 242 aa, chain + ## HITS:1 COG:NMA1702 KEGG:ns NR:ns ## COG: NMA1702 COG0689 # Protein_GI_number: 15794595 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Neisseria meningitidis Z2491 # 1 241 1 241 242 402 89.0 1e-112 MSDYTRTGRAADSLRNIKITPNFLPHADGSCLIECGNTKVICTASIDENVPPFLRGKEQG WVTAEYGMLPASTASRMRREAAAGKQSGRTQEIQRLIGRSLRAVVDMEKLGERQILIDCD VIQADGGTRTASITGAYVALQIAVDKLLSDGLISENPIREAVAAVSAGVVGGVPLLDLDY PEDSGCDSDVNIIMTASGKIIEIQGTAEGAPFSIEELGKLIALAHKGIAELVQHQQAALL AR >gi|241319131|gb|ACQV01000027.1| GENE 99 100913 - 102133 1745 406 aa, chain + ## HITS:1 COG:NMB1498 KEGG:ns NR:ns ## COG: NMB1498 COG0527 # Protein_GI_number: 15677351 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Neisseria meningitidis MC58 # 1 405 1 405 405 709 96.0 0 MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMSGETNRLVALAHEMQEH PDPRELDVVLATGEQVTIGLLAMALKDIGVDAKSYTGWQVALQTDTSHTKARIENIDNEK MRADLAAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAIAAALKADECQIYTDVDGVYT TDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEFAGKYKVRLRVLSSLQDGGNGTL ITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVG SEGTTDFSFTVPRGDYKQTIELLQQRQDSIGAACIDGDDTVCKVSAVGLGMRSHVGVAAK IFRTLAEEGINIQMISTSEIKVSVLIDEKYMELATRVLHKAFDLGN >gi|241319131|gb|ACQV01000027.1| GENE 100 102213 - 102653 437 146 aa, chain - ## HITS:1 COG:NMB1568 KEGG:ns NR:ns ## COG: NMB1568 COG2927 # Protein_GI_number: 15677419 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Neisseria meningitidis MC58 # 1 145 1 145 146 196 66.0 1e-50 MPKATFYTHVAQPAAFACRLITRAIRDGGQILVWSDSAAAVQQLDVDLWQQIPESFIPHE VWLPTDPMPSETPVLLAFGNALPNIPQDCTVLNLSADFWSQAPAIPNRILEIVGNSLEDL AEARDRFRAYRQSGFEIEHFSREGKD >gi|241319131|gb|ACQV01000027.1| GENE 101 102691 - 105177 2646 828 aa, chain - ## HITS:1 COG:NMB1042 KEGG:ns NR:ns ## COG: NMB1042 COG2217 # Protein_GI_number: 15676928 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Neisseria meningitidis MC58 # 8 826 2 813 823 1224 74.0 0 MTSPTHPQKNCFHCGLEVPEHLHLTVRFEDEEHETCCAGCQAVAQSIIDAGLGNYYKQRT ADAEKSELPPPEVLSQLKLYDLPEVQADFVEVGAGDEREAVLMLGGITCAACVWLIEQQL LRMKGVVRVDLNYSTHRCRVVWDSAHIELSDILLKIRQTGYTAAPYDAQKIEAQAQKERK QFIVRLAVAGLGMMQTMMFALPTYFYGGDIEPLYLEILHWGGFLMVLPVVFYSALPFYRG AWRDWKNRRVGMDTPIAIAIVMTFIAGIYSLATNAGQGMYFESIAMLLFFLLGGRFMEQI ARRKAGDAAERLVKLVPAFCHRLPSYPESDAIEEAAVVRLNIGDTIVVKPGEVIPVDGTV LSGESEVNEAMLTGESLPIVKRPSEKVTAGTLNTSSPLIIRTDHTGGNTRLSHIVKLLDR ALAQKPRAAELAEKYASSFVFGELLLAIPVFIGWAWYADAHTALWITVALLVITCPCALS LATPTALAASTGALAKDGILISGKQSLETLAQIDDVVFDKTGTLTKGQLSVSRMLHAGRL NEAQALAIAQALEQQSEHPIAHAILNHMLLDGPVSALDVKVQQRVNRIGHGVSAQIEFDG ETQVWALGKAAFVSEIAGNLPEAFAHTDHTGGIIFLSNQSGFQTAFLLEDQIKDSAAEML HNLKQHGIRLHLLSGDRQAAVAQVAQELGLDAYRAEATPEDKLAYVENLQKQGRKVMMIG DGINDAPVLAQADVSAAVATSADVARDGSDVVLLNDDLNVLPVMMEQARRTHQIIRQNLT WASAYNLVAVPLAVFGYVTPWIAALGMSFSSLLVLGNALRLLKTKKAV >gi|241319131|gb|ACQV01000027.1| GENE 102 105538 - 105663 211 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIDRLMPIFAVIGILSSTVYLSLAAWMLYESVFKKKSPLSA >gi|241319131|gb|ACQV01000027.1| GENE 103 105732 - 106892 711 386 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 34 351 20 341 425 278 48 1e-73 MSKRNLFSVDKSLEQPERVLLVGVMLTADYSGANETRERGFQTALTEAAELVSAAGGDLV SIETSRRDKPHPALFVGTGKAEELAAVVKQHDVGLVVFNHELTPTQERNLEKELQCRVLD RVGLILAIFAKRAQSQEGKLQVELAQLNHLSGRLVRGYGHLQSQKGGIGLKGPGETQLET DRRLIGQKITALKKQLADVRKQRATRRKSRMSGRLKTFAIVGYTNAGKSSLFNRLTKADV LAKDQLFATLDTTARRLFLSHEASVILTDTVGFVRDLPHKLVSAFSATLEETAMADVLLH VVDVSNPDFERQMDDVNVVLEEIGAHEIPQLVVYNKIDLLPSGMREAGILRDNSGHAVGV NVSVAESLGLDGLREAMIELAVQPSD >gi|241319131|gb|ACQV01000027.1| GENE 104 106937 - 108172 1480 411 aa, chain - ## HITS:1 COG:mll0582_1 KEGG:ns NR:ns ## COG: mll0582_1 COG0463 # Protein_GI_number: 13470787 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Mesorhizobium loti # 9 224 3 221 225 131 37.0 2e-30 MRLLKMSQTICLNMIVKNEAAIIEETLANITDHIKLDYYVISDTGSTDDTVGVIRRFFDA KGIAGEIHQDGWQNFAYNRNQALKHAKGKTDYVLIFDADDRFEGKLELPELTADRYRLRM RNAMGGVVYYRPLLLRNDGTFYWRGVLHEFIETDKQDTSEATLHGDYTVLSGRFGARSNM ANKYLLDAVSLEKAFYSPEDEDLKPRYAFYAARSYWDSDMPERASEWFKKRIELGGWIEE VTVSYQQLGECYKLMGKRDEALVTWLAGYDYNPRRAECLYLAQTMLRQEGKYRISHAIGL MAKRIPFPKDDILFVQSNVYQLDIDYELSVTAYAAGDLRQGYESCRHLLLLNVREALTTV TMQNMWLYREHAQTETREVLEQLVAVMQPYAAQGGRLAEVTEYFADILKNR >gi|241319131|gb|ACQV01000027.1| GENE 105 108277 - 109347 1307 356 aa, chain - ## HITS:1 COG:NMA1760 KEGG:ns NR:ns ## COG: NMA1760 COG0795 # Protein_GI_number: 15794653 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 614 89.0 1e-176 MNLISRYIIRQMAVMAVYALLAFLALYSFFEIINEVGDLGKGSYNSAKLGQYVLMQMPAR AYELMPLAVLIGGLISLSQLASGSELTVIKASGMSTKKLLLILSQFGLIFAIATVALGEW VAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVREMLPDHTLLGIKIWQRNDKN ELTQAAEAESAVLNPDGSWQLKNIRRSILGEDKVEVSTAAEENWPISVKRNLMDVLLVKP DQMSVGELTTYIDHLEKNNQNTQVYAIAWWRKLVYPVAAWVMALVAFAFTPQTTRHGNMG LKLFGGICLGLLFHFAGRLFGFTSQLYGVPPFLAGALPTVLFALLAVYLIRRQEKR >gi|241319131|gb|ACQV01000027.1| GENE 106 109344 - 110459 1308 371 aa, chain - ## HITS:1 COG:NMA1759 KEGG:ns NR:ns ## COG: NMA1759 COG0795 # Protein_GI_number: 15794652 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 667 94.0 0 MIYQRNFIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVAIDAVLALVGFWVIGMT PLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPVMQFAVPFAILIAVMQLWV MPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVYFVETFDTESGIMKNLFLREQ DKNGNDNIVFAKEGNFSLTDNKRTLELRDGYRYSGTPGKADYNRVSFQHLSLIISTTPKL IDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVSVLLLCLLAVPLSYFNPRSGHTYNI LIAIGLFLVYQNGLTFLRNAVEDGKIHFWLGLLPMHIIMFVIAVVLLRVRSMPSQPFWQA VAKSLTLKGGK >gi|241319131|gb|ACQV01000027.1| GENE 107 110618 - 112027 2012 469 aa, chain + ## HITS:1 COG:NMA1758 KEGG:ns NR:ns ## COG: NMA1758 COG0260 # Protein_GI_number: 15794651 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Neisseria meningitidis Z2491 # 1 468 1 468 468 797 94.0 0 MKFSTKAETLQAQQAGAQLFVCAEASQLSNPTALALFASLEEGQNFADTKIPTDNGLQAI AVARLAKTDRAALNKAAAEAAKWAQNQETVNVDVHAFDEAQAAAVAEAFAIVFGNAAYRF DRYKKEAKPAKFAEAVFHSAHEAAVKEALRVAEAQVYGQSLCRDLGNAAPNECTPEFLAR TAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVEDPYLVELSYFGAADKEAAPVVLV GKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTFCAAVKLQLPINLIAIVATCENMPS GAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDALTYAEQFKPKAVIDVATLTGACIIAL GHDVSGVMGNNQDLVDSLLAASRNVDDKAWQLPLFETYKDQLKSNFADIPNIGTPGAGTI TAATFLSYFTEDYPWAHLDIAGTAWKSGGEKGATGRPVPLLLNYLRNVK >gi|241319131|gb|ACQV01000027.1| GENE 108 112123 - 112596 648 157 aa, chain + ## HITS:1 COG:FN0550 KEGG:ns NR:ns ## COG: FN0550 COG0662 # Protein_GI_number: 19703885 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Fusobacterium nucleatum # 34 156 17 139 141 143 58.0 1e-34 MKPLFAALSVALLLGTSISAQAAEQTAPTDRSIQVYKKADLAEWNRENAAGGQGPLLGSF AFTRHQTADQDAFKEIGWLTLPPGASIGQHKHTGNEDVYIIVSGKGLFTDSEGKQTEVGA GDITIARPGQSHALKNIGKKPLVFLDLIAETAGAKAA >gi|241319131|gb|ACQV01000027.1| GENE 109 112825 - 115113 2657 762 aa, chain + ## HITS:1 COG:NMB0964 KEGG:ns NR:ns ## COG: NMB0964 COG1629 # Protein_GI_number: 15676857 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 1 762 1 758 758 1458 94.0 0 MTQTTLKPIVLSILLISTPILSQAHETEQSVDLDEVTVVGKSRPRATSGLLHTSTASDKI ISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRIKVLNHHGETGDMADF SPDHALMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRL SSGNLEKLTSAGINIGLGNNFVLHTEGLYRKSGDYAVPRYQKEEGRLKRLPDSHADSKTG SIGLSWVGDKGFLGVAYSDRRDRYGLPAHSHLYDDCHADIIWQKSLINKRYLQLYPHLLT EEDVDYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKRYELRAEWKQPFPGFEALRVHLN RNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGRLKGSWGVQYLGQKSSALSAIPETV QQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNQPLPD LGAHRQTARSFALSGNWYFTPQHKLSLTASHQERLPSTQELYAHGKHVATNTFEVGNKHL NKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQILNDGRGPKSIEDDSEMKLVRYN QSGADFYGAEGEIFFKPTPRYRIGLSGDYVRGRLKNLPSLPGREDAYGNRPLIAQADQNA PRVPAARLGFHLNAALTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRY GEWNWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKF >gi|241319131|gb|ACQV01000027.1| GENE 110 115198 - 116013 1081 271 aa, chain - ## HITS:1 COG:NMA1160 KEGG:ns NR:ns ## COG: NMA1160 COG0688 # Protein_GI_number: 15794106 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Neisseria meningitidis Z2491 # 1 271 1 265 265 486 92.0 1e-137 MNRLYPHPIIAREGWPIIGGGLALSLLISMCCGWWSLPFWVFTVFALQFFRDPAREIPQN PEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKF VNADLDKASTENERNAVLATTASGREITFVQVAGLVARRILCYTQAGAKLSRGERYGFIR FGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAPQTESEPKAAAAPQAAPTSQAAP VETVASQSTEQQQIEAAAAKIQAAVQDVLKD >gi|241319131|gb|ACQV01000027.1| GENE 111 116239 - 116505 195 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760324|ref|ZP_04758419.1| ## NR: gi|241760324|ref|ZP_04758419.1| hypothetical protein NEIFL0001_1649 [Neisseria flavescens SK114] # 1 88 1 88 88 101 100.0 1e-20 MKQQEYEEARELLLLEAKLVRLRIEAENLKLRKAEESNARQTNRLVMLADVAYQLSQTRL LSQRALFSTSRRRHWIWLVLAVILGLSR >gi|241319131|gb|ACQV01000027.1| GENE 112 116486 - 116893 469 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760370|ref|ZP_04758465.1| ## NR: gi|241760370|ref|ZP_04758465.1| hypothetical protein NEIFL0001_1650 [Neisseria flavescens SK114] # 1 135 1 135 135 199 100.0 5e-50 MGIRQRFEHGKALLNQGVDLLLLRLQVLSLDLTRQAENVFRLAIWLVLSGALLMVGLVGL LFGLNRVLSDVAALWVFFGIFFVSLLIIAVLFRKVSADYREQGSRVAETLQDIRSDIAYL RGEIDKDADDEATGV >gi|241319131|gb|ACQV01000027.1| GENE 113 117004 - 117438 785 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760344|ref|ZP_04758439.1| ## NR: gi|241760344|ref|ZP_04758439.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 144 1 144 144 174 100.0 2e-42 MKKHDFEARREALLKDIREVMDDVEELYRNGVEAGSEEGSKARAKLEEKLAVAKERLSRF EEEAGERLRHHAERAREKYEQFEEAAQERLKEGKERFAEFEADAGARLKRGAKHADEVVH EKPYYAMGFAALAGLVVGVLLNRR >gi|241319131|gb|ACQV01000027.1| GENE 114 117631 - 118521 1591 296 aa, chain - ## HITS:1 COG:NMB0960 KEGG:ns NR:ns ## COG: NMB0960 COG0074 # Protein_GI_number: 15676853 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 296 1 296 296 522 99.0 1e-148 MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKGGQTHLDLPVFNTMKEA VKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPTLDMLKAKRYLETNGNGTR LVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLTYEAVAQTTKLGLGQSTCIGI GGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEEEAAEYIQSNVTKPVVGYIAGVT APKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYTRSPAELGTTMLEVLKAKGLA >gi|241319131|gb|ACQV01000027.1| GENE 115 118532 - 119698 1800 388 aa, chain - ## HITS:1 COG:NMB0959 KEGG:ns NR:ns ## COG: NMB0959 COG0045 # Protein_GI_number: 15676852 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 388 1 388 388 706 98.0 0 MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGV KVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTR RVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVK LMTGAYKAFVDNDFALFEVNPLAVRENGDLACVDGKIGIDSNALYRLPKIAELRDKSQEN ERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVV EAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRLEGNNAELGAK ILNESGLKLTSADGLNDAAEKIVAAVNA >gi|241319131|gb|ACQV01000027.1| GENE 116 119770 - 120057 342 95 aa, chain - ## HITS:1 COG:no KEGG:NMO_0854 NR:ns ## KEGG: NMO_0854 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 95 1 95 95 165 100.0 5e-40 MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKELVWRVALLFISFSLAVY LLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK >gi|241319131|gb|ACQV01000027.1| GENE 117 120182 - 121615 827 477 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 476 1 457 458 323 39 4e-87 MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPALGGTCLNVGCIPSKAL LQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVTKLTGGVKFLFQKNKVTSLFG TASFAGKNGDAYQIEVDNKDEKTVIEAKHVIVATGSVPRPLPQVAIDNVNVLDNEGALNL TEVPAKLGVIGSGVIGLEMGSVWNRVGSEVTILEAAPTFLAAADQQIAKEAFKYFTKEQG LSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFDKLIVAIGRIPNTKGLNAEAVGLEK DERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHKASDEGVAVAERIAGQKPHIDFNNVPF VIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALAMGKAKGTVKVLADAKTDRIL GVHMIGPVVSELVTEGVTALEFFASSEDIARIIHAHPTLSEVVHEAALAADKRALHG >gi|241319131|gb|ACQV01000027.1| GENE 118 121875 - 123056 1583 393 aa, chain - ## HITS:1 COG:NMB0956 KEGG:ns NR:ns ## COG: NMB0956 COG0508 # Protein_GI_number: 15676849 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Neisseria meningitidis MC58 # 1 393 1 393 393 597 98.0 1e-171 MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKVVLEVPSPQAGVLVEIV AQDGETVVADQVLARIDTAATAAAEVPAAAPAEAAPAASPAAAQNNAAMPAAAKLAAETG VDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAGARPEERVPMSRLRARVAERL LASQQENAILTTFNEVNMKPIMDLRAKYKDKFEKEHGVKLGFMSFFVKAAVAALKKYPVV NASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIADIEQAIVDYAKKAKDGKIA IEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHATKERAVVENGQVVVRPMMYLAL SYDHRIIDGREAVLTLVAIKDALEDPARLLLDL >gi|241319131|gb|ACQV01000027.1| GENE 119 123156 - 125984 3529 942 aa, chain - ## HITS:1 COG:NMA1149 KEGG:ns NR:ns ## COG: NMA1149 COG0567 # Protein_GI_number: 15794095 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 1 942 1 942 942 1899 96.0 0 MMDEKLNFSYLFGSNAPYIEELYEKFLDNPESVDEKWKQYFTDLSKQPGAVAVDVAHTPI RESFATLAKKKIAAAVSGGVDEAMMKKQVSVLRLISAYRIQGVGAAQLDPLKRIPPQNIE ALDPKFHGLSDADMALQFNMGEGDFSGQGKLPLSQIISNLKQTYCGHIAVEYIYIPNTEE RRWVRNYFESVLSTPSYNVEQKRRILKEMTAAETLERYLHTKYVGQKRFGVEGGESAIAG LNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKKPSDLFAEFEGRAEIKLPSGDVKYH MGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEGSARAKQKRLGENGRDKVLPVLIHGDS AFIGLGVNQATFNLSKTRGYTTGGTVHIVINNQIGFTTSDTRDTRSTVYCTDIAKMVSAP VIHVNGDDPERVCFAIQAALDYRKKFHKDIVVDVVCYRKWGHNEGDDPTLTQPMMYKKVS QHPGARALYTEQLIAEGVVTQAEADGYIQAYRNALDKGEHVEQTTLSNFQRTQIDWSKYQ GKDWREHIETGLPAADIERLTEKFTAVPEGFALHPTAKRVIEARKAMASGKQAIDWGMAE TLAYASLLTKGHGVRISGEDSGRGTFSHRHAVLHDQNREKWDDGTYVPLRHMGEGMGEFL VIDSILNEEAVMAFEYGFACSAPDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCG LTTILPHGYDGQGPEHSSARVERWLQLCSENNMQVIMPSEASQMFHILQRQVLGSYRKPL VIFMSKRLLRFKGAMSSLENFTKGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAG RAERKLEDDVAIVRVEQLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIE DVISEEQKLSYAGRPSSASPAVGYSSKHIAQLKQLVEDALAL >gi|241319131|gb|ACQV01000027.1| GENE 120 126194 - 127477 1394 427 aa, chain - ## HITS:1 COG:NMA1148 KEGG:ns NR:ns ## COG: NMA1148 COG0372 # Protein_GI_number: 15794094 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 1 427 1 427 427 862 94.0 0 MSKSVKLTTPNQETLELPVLEASIGHDVVDIRTLTKNTGLFSFDPGFVSTASCESKITYI DGDEGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKKEFDATVSRHTMLHEQLTW FFRGFRRDAHPMAMMVGVVGALSAFYQDSLDIANPEHRKIAIYRLISKIPTIAAMCYRYS NGLPFNYPKNNLSYAENFLHMMFATPCEEYKPNPVLARALDRIFILHADHEQNASTSTVR LAGSSGANPFACIAAGIACLWGASHGGANEAVLKMLDEIGDVSNVAAYMEGVKQRKYRLM GFGHRVYRNMDPRANIMRETCYEVLKELGLEDSPKFKLAMELEQIALKDPFFVERKLYPN VDFYSGIVLSALGIPTEMFTVIFALSRSVGWISHWHEMISDPALKIGRPRQLYTGAERRD YVPVDKR >gi|241319131|gb|ACQV01000027.1| GENE 121 127602 - 127850 282 82 aa, chain - ## HITS:1 COG:NMA1147 KEGG:ns NR:ns ## COG: NMA1147 COG2938 # Protein_GI_number: 15794093 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 82 1 82 82 125 95.0 3e-29 MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDQELSEFSEILEFQDQELLAL INGHSATDKKHLIPMLEKIRQA >gi|241319131|gb|ACQV01000027.1| GENE 122 127854 - 128561 1054 235 aa, chain - ## HITS:1 COG:NMA1146 KEGG:ns NR:ns ## COG: NMA1146 COG0479 # Protein_GI_number: 15794092 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Neisseria meningitidis Z2491 # 1 235 1 235 235 484 99.0 1e-137 MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKAQDDTLSFRRSCREGIC GSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIVDMTQFFKQYHSIKPYVVN DNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFWWNPDKFVGPSGLLNAYRFIA DSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLNPTRAIGKIKEIMLKRAV >gi|241319131|gb|ACQV01000027.1| GENE 123 128681 - 130444 2550 587 aa, chain - ## HITS:1 COG:NMB0950 KEGG:ns NR:ns ## COG: NMB0950 COG1053 # Protein_GI_number: 15676843 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Neisseria meningitidis MC58 # 1 587 1 587 587 1175 99.0 0 MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRSHTVAAQGGISASLGNV QEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHMGMPFDRVESGKIYQRPFG GHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQFFVEWTAQDLIRDENGDVVGV TAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMNTGDGLGICARAGIPLEDMEFWQ FHPTGVAGAGVLITEGVRGEGGILLNADGERFMERYAPTVKDLASRDVVSRAMAMEIYEG RGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISIQFAGIDPIKDPIPVVPTTHYMMGGIP TNYHGEVVVPQGEDYEVPVKGLYAAGECACASVHGANRLGTNSLLDLVVFGKAAGDSMIK FIKEQSDWKPLPANAGELTRQRIERLDNQTDGENVDALRRELQRSVQLHAGVFRTDEILS KGVREIMAIAERVKRTEIKDKSKVWNTARIEALELDNLIEVAKATLVSAEARKESRGAHA SDDHPERDDENWMKHTLYHSDTNTLSYKPVHTKPLSVEYIKPAKRVY >gi|241319131|gb|ACQV01000027.1| GENE 124 130447 - 130788 432 113 aa, chain - ## HITS:1 COG:NMA1144 KEGG:ns NR:ns ## COG: NMA1144 COG2142 # Protein_GI_number: 15794090 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 174 93.0 4e-44 MVERKLTGAHYGLRDWAMQRATAVIMLVYTVVLLVVLFTLPKEYSAWQAFFDQTWVKVFT QVSFLAVFLHAWVGIRDLWMDYIKPFGLRLFLQVATIVWLVGCLVYSVKVIWG >gi|241319131|gb|ACQV01000027.1| GENE 125 130782 - 131159 650 125 aa, chain - ## HITS:1 COG:NMA1143 KEGG:ns NR:ns ## COG: NMA1143 COG2009 # Protein_GI_number: 15794089 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 125 181 80.0 4e-46 MSAKSRPVFLEIPNIRLPIPGIVSILHRISGVGLFVMLPVLLYFFSGTLDREASFEAYRS AISNPFVKLILIGLLWAYLHHFFAGIRFLFLDVHKGLELNTARATAKVVFASALILTVVL GALLW >gi|241319131|gb|ACQV01000027.1| GENE 126 131786 - 132058 153 90 aa, chain - ## HITS:1 COG:no KEGG:NMC0454 NR:ns ## KEGG: NMC0454 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 90 1 90 90 167 94.0 1e-40 MNKRIKICPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGVNIFYGEYEKDFYSYVPFM ESQGITDECIWEGELFDHPYYEDENSNDMD >gi|241319131|gb|ACQV01000027.1| GENE 127 132266 - 132649 679 127 aa, chain + ## HITS:1 COG:BMEI1865 KEGG:ns NR:ns ## COG: BMEI1865 COG3339 # Protein_GI_number: 17988148 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 19 122 18 120 127 68 37.0 2e-12 MTHSPHQNTPDPEDYIPSFRRRNLDTSGFMKKLGRFAGRLGKPVVRQLYALYYLWESEHT PKRAKMIIVGALVYFLSPIDSIPDLLIPFGFSDDIAVIALVYSQMKNYLTKDIQEKARQA ADKLFGS >gi|241319131|gb|ACQV01000027.1| GENE 128 132734 - 133234 371 166 aa, chain - ## HITS:1 COG:no KEGG:NGO1251 NR:ns ## KEGG: NGO1251 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 166 31 192 192 245 71.0 4e-64 MKKYILPILAVAVLAGCESIYVPTLKEVPVRPTNVKKPKADSQVSATSYHLAPSHWADVS KIHDEARRLSTQVSQGSLTKVQAAQYLNRFRIQQVGRNSVDDSMYEVYLRSAVDSQRGEI TTEQSKQYIQGALRGWQQRWKNMDTKPSNPAFTNFLMEVMGMQPLK >gi|241319131|gb|ACQV01000027.1| GENE 129 133243 - 133341 61 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGLRYSMKSVVIQLMSFEYRYSKVGFFNESCL >gi|241319131|gb|ACQV01000027.1| GENE 130 133387 - 134355 821 322 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 13 318 1 304 308 320 56 2e-86 MQAISHLNLEQEMKIANNITELIGNTPLVKLNRLTEGLKAQIAVKLEFFNPGSSVKDRIA EAMIEAAEQAGKINKDTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKERKMLLRA FGAELILTPAAEGMAGAIAKAQSLVDEHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDTD GQVDIFVAGVGTGGTITGVGEVLKKYKPEVQIVAVEPEASPVLSGGEKGPHPIQGLGAGF IPSVLNTTVYDSIVKVPNEAAFETARAMAEKEGILVGISSGAAVWSALQLAKKTENEGKL IVVLLPSYGERYLSTPLFADLA >gi|241319131|gb|ACQV01000027.1| GENE 131 134425 - 135024 393 199 aa, chain - ## HITS:1 COG:no KEGG:NMC0714 NR:ns ## KEGG: NMC0714 # Name: not_defined # Def: putative integral membrane protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 197 3 200 201 167 53.0 2e-40 MVSLDFWFAIAYAVVSLAFIFRAQRFQWLWAAVLLWLGISALGARLLPGMWGFTHTGPLF IPHFYLTIASIFFFIDDCSKTEDKKFWSAGEYAGLTLFAVSNVVMTLAFVFLAGVVYFIL PLAGAVFAWAALLKIYALKPIYWFVLQGVLMLVFYLHRVVVCRQSAALFSTTQLQMGWLV AVVMQVVVAMALIFERGGY >gi|241319131|gb|ACQV01000027.1| GENE 132 135024 - 135875 698 283 aa, chain - ## HITS:1 COG:NMA0972 KEGG:ns NR:ns ## COG: NMA0972 COG0253 # Protein_GI_number: 15793929 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Neisseria meningitidis Z2491 # 1 283 1 283 283 419 73.0 1e-117 MKTLKFTKMHGLGNDFMVVNAINQDFDPLAAPLAQWADRYRGVGFDQFLVVEKPSSDAVD FRYRIFNADGREVEQCGNGARCFARFVADKGLTDKTEILVETAKGIIVPKLLDNGLVTVN MGKPRFMPSEIPFVPAHGENKDALTHIVLVGLESVPVSCVNMGNPHAVILVDDVETAPVE HWGGAIESHEQFPERVNVGFVQVEDELSVRLRVFERGVGETQACGTGACAAVVAGVRNGL LKEGAPVRVTLPGGELFISWEECGDVQMTGPAETVFEGELQYS >gi|241319131|gb|ACQV01000027.1| GENE 133 136056 - 136547 953 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225075131|ref|ZP_03718330.1| ## NR: gi|225075131|ref|ZP_03718330.1| hypothetical protein NEIFLAOT_00130 [Neisseria flavescens NRL30031/H210] # 1 163 1 163 163 275 98.0 5e-73 MKKVLLPALLAASLSACTVGTPGVSVGLGVGTSIGRHVGLGTSINIPVGLDKTKTTKDTD SDGIRITEEQIVTYFDAHGTPSNSAVKGGFHRQLISKRNNEYVVQDFYSDNSQKRTDPYI LSRNQLMQFRATPSNGSLTTYAYNGTVMQQQVFQNGKLVNAKY >gi|241319131|gb|ACQV01000027.1| GENE 134 137252 - 137587 177 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 10 102 14 104 114 72 40 8e-12 MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEVEGEAGNGLVKVVMTCSHVVRKLEISPD LIQEAADDKEMLEDLVLAAINAASEKAEETTNKTMGAFTQGLPAGMGDFFR >gi|241319131|gb|ACQV01000027.1| GENE 135 137678 - 139678 2195 666 aa, chain - ## HITS:1 COG:NMB1443 KEGG:ns NR:ns ## COG: NMB1443 COG2812 # Protein_GI_number: 15678010 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Neisseria meningitidis MC58 # 1 665 1 702 704 769 63.0 0 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK SLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTT QQVAEHLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQM IGAVDKQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPS ALANDDPERETLLRLSQALSGEQIQLYYQCAIHGKQDLPLAPDEYAGFVMTLLRMLAFAP LAASGCDTQSQIEHTDLHSDHQKAEAEKKPFQLPKSEPIAAPAVEKEAAPAKQDTVERSS EETVQSVQQQADVPPWEEMPSQVSVESPQTQAAQMQEATEPLPVAKVQKAPAPEEYPHMD EEIPPPYFDEAYTYEDSHHADVMEVPQPVASAESEEEEGDEEELQFAPLPEFKTENWHSI IERFARKLGAAQMLAQNAAWTSYDAEAGLIMLSLTDEAKATANKERLDKICQTLSEAYHL GNLRLQTEPWQDDKGWETPVMRRKHIQEEGRQQAQELLEADTTAQKILQTFEAQWLPDSL ELAGHS >gi|241319131|gb|ACQV01000027.1| GENE 136 139996 - 140589 520 197 aa, chain + ## HITS:1 COG:no KEGG:Apre_1390 NR:ns ## KEGG: Apre_1390 # Name: not_defined # Def: aldose 1-epimerase # Organism: A.prevotii # Pathway: not_defined # 1 172 39 209 235 85 31.0 1e-15 MGDDTKLRGGMHVYLPQFGPDSKNHLAQHDFGRTSDWEIRHQNESDIGLKLISTEKGYEH VEWLLDYSLPNENEAIAILTVCNYGESPVRTSPGFHPYFTAVGTQFDFNSAPYDADYISH TEFVSSNQDARVAFDGLKLDIRTHNLPVYALWSDRNGQYTCAEPTAEGNAFLSPARGGQF VSGHSKKRYAMKIRLMA >gi|241319131|gb|ACQV01000027.1| GENE 137 140650 - 141477 709 275 aa, chain - ## HITS:1 COG:NMB1279 KEGG:ns NR:ns ## COG: NMB1279 COG2951 # Protein_GI_number: 15677146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Neisseria meningitidis MC58 # 22 275 116 369 369 420 79.0 1e-117 MAWCIKAISLPLYTVQALRVHWFEFRTGNSGAAKFNGGRQFYAANRAVIDDVARKYGVPA ELIVAILGIETNYGKNTGSFRVADALSTLAFDYPRRAEFFQNELSELLQMAKEEKENVFD FKGSYAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWNNVGDVAASVANYMKQHGWQTGGKM VVPVSLTITPHLQAIIDEKTALTRTVADFKALGVVPQAAVADNEKAVLYALETSPGVFEY YLGLNNFYTVWQYNHSRMYVTAVRDIANAINDNGL >gi|241319131|gb|ACQV01000027.1| GENE 138 141407 - 141730 368 107 aa, chain - ## HITS:1 COG:NMB1279 KEGG:ns NR:ns ## COG: NMB1279 COG2951 # Protein_GI_number: 15677146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Neisseria meningitidis MC58 # 1 105 1 115 369 62 38.0 2e-10 MNKIKIFGMGLAALALASCSTPQKPAVDTAKPVEPVSSAKRPVFDAAAESVASSGFNENV NVQQFIQYEVKNRRFSAEELRNFFNGVVYKGNIITIIYRPSTSRPLV >gi|241319131|gb|ACQV01000027.1| GENE 139 141939 - 142391 723 150 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241760409|ref|ZP_04758504.1| ribosomal protein L9 [Neisseria flavescens SK114] # 1 150 1 150 150 283 100 4e-75 MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANMKEFEARRAELEVKQAE ILADAKARQEKLEGQTITVAQKAGVDGRLFGSVTNADIAEAIVAAGIQAAKANVRLPNGP LKAVGEYEVEVALHTDAVAKITVAVVAAAE >gi|241319131|gb|ACQV01000027.1| GENE 140 142408 - 142638 388 76 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens NRL30031/H210] # 1 76 1 76 76 154 100 3e-36 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV KRARFLALLPYTDQHK >gi|241319131|gb|ACQV01000027.1| GENE 141 142645 - 142941 112 98 aa, chain - ## HITS:1 COG:NMB1322 KEGG:ns NR:ns ## COG: NMB1322 COG2965 # Protein_GI_number: 15677188 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N # Organism: Neisseria meningitidis MC58 # 2 98 4 100 100 137 70.0 5e-33 MNNLIKLTARILQVQPLRYTPAGVPVLDVVLQHESWQEENGQKCLVKFEIPARILGKQAE EWQYRQDAIIESEGFLAQRSQRFPKPVLRIQNIKEYKG >gi|241319131|gb|ACQV01000027.1| GENE 142 142944 - 143315 632 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 [Neisseria flavescens SK114] # 1 123 1 123 123 248 100 1e-64 MRHYEIVFIVHPDQSEQVPAMVERYKTMITEASGKIHRLEDWGRRQLAYPINKIHKAHYV LMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPMLGGEKAKNLLNGAAEEVA AAE >gi|241319131|gb|ACQV01000027.1| GENE 143 143561 - 145420 2888 619 aa, chain + ## HITS:1 COG:NMA1340 KEGG:ns NR:ns ## COG: NMA1340 COG0443 # Protein_GI_number: 15794264 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Neisseria meningitidis Z2491 # 1 619 1 620 620 990 89.0 0 MALLQISEPGMSAAPHQHRLAVGIDLGTTNSLVATVRSGSAVCLPDSDGRSTLPSVVRYL DGEVEVGKNALSAQKTDPLNTISSAKRLIGRTLTDLAQEAQYLPYRFTPNERVVELNTRQ GAKTPIEVSAEILKALKLRAEETLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLNVLR LLNEPTAAAIAYGLDNSSEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGNSALGGDDF DHRLFCHLLEQNDLSKLNEQDSQLLLSLVRTAKEKLTTQTEAVIETSLSDGHKVHTVITR QEFHNLTQNLVQKTIEPVKQALKDAGVTKADVKGVIMVGGSTRMLHVQQAVATFFGQTPL NNLNPDEVVALGAAIQANVLAGNKTDGEWLLLDVTPLSLGLETYGGLAEKIIPRNSTIPT ARAQDFTTFKDGQTAMTIHVVQGERELVSDCRSLAKFTLRGIPPMAAGAARIRVTFQVDA DGLLSVSAQEQSTGVQTQIEVKPSYGLDDSTITQMLKDSMSNAAEDMAARARAEAVVEAE SLTDAVNTALELDRDLLDTEELAQIQQDIADLQGRLKDGKAEDIRAAVAKLSHSTDNFAA KRMNRNIQRALTGQSVDNI >gi|241319131|gb|ACQV01000027.1| GENE 144 145503 - 146132 460 209 aa, chain + ## HITS:1 COG:no KEGG:NMB1132 NR:ns ## KEGG: NMB1132 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 209 1 209 218 261 67.0 9e-69 MEKAGIVYLMKTVIKGVYKIGITDENNFEIRMRHLENNGYANVAGLERILAIKTDNYKEK ETLLHEIFGKSQIGETELFAIDENLVKRLFLSLRGEIVFPKNEIAELGFEKTVKEHHQEK IFEVNRSAFISFIKEKHQQNPSILRNLISSENAYKPKNSKVRLYKDEYFGKSGTKLTTEI EEGLHIYTTYSKKDLKIAYEDYSELFESQ >gi|241319131|gb|ACQV01000027.1| GENE 145 146129 - 146491 307 120 aa, chain + ## HITS:1 COG:no KEGG:SZO_07190 NR:ns ## KEGG: SZO_07190 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 120 1 120 122 168 69.0 5e-41 MRLWHQTLIPLLPRAQLLGQHRECAALRGAGWGRPHATVNYVFTHSPYKLYLYHALIMKE MERRGYKPDALWKDPLYRGKAVVPYHSHAAETATSPIYAEHDDAYLDECLKNLRNKGIML >gi|241319131|gb|ACQV01000027.1| GENE 146 146584 - 146925 497 113 aa, chain + ## HITS:1 COG:NMA1344 KEGG:ns NR:ns ## COG: NMA1344 COG0633 # Protein_GI_number: 15794267 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis Z2491 # 1 113 1 113 113 195 93.0 2e-50 MPKITVLPHATLCPEGAVIEDAPEGQTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGF DSLEEPTELEEDLLDQAWGLEADSRLSCQAVVADEDLVVEIPKYTINHAREDH >gi|241319131|gb|ACQV01000027.1| GENE 147 147002 - 147298 343 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225077221|ref|ZP_03720420.1| ## NR: gi|225077221|ref|ZP_03720420.1| hypothetical protein NEIFLAOT_02276 [Neisseria flavescens NRL30031/H210] # 1 98 110 207 207 159 86.0 7e-38 AVLENGADKSHYIDEANAIIERFGLVRDEAALSAIEAAEALKAEQELQATSEPKKSAPKH HGNLHQIRIQEKIENYSATQKVVAMQISRMRFIFPHIK Prediction of potential genes in microbial genomes Time: Thu May 26 11:58:31 2011 Seq name: gi|241319087|gb|ACQV01000028.1| Neisseria flavescens SK114 ctg1118407793861, whole genome shotgun sequence Length of sequence - 32538 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 14, operones - 7 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1375 681 ## gi|241760426|ref|ZP_04758520.1| hypothetical protein NEIFL0001_0302 - Prom 1478 - 1537 6.4 + Prom 1634 - 1693 8.3 2 2 Tu 1 . + CDS 1784 - 2221 356 ## APJL_0964 DNA repair ATPase - Term 2073 - 2110 -0.8 3 3 Tu 1 . - CDS 2236 - 2610 209 ## HD1609 hypothetical protein - Prom 2683 - 2742 4.8 + Prom 2584 - 2643 5.0 4 4 Tu 1 . + CDS 2822 - 4237 2058 ## COG2067 Long-chain fatty acid transport protein + Term 4262 - 4299 9.1 - Term 4580 - 4622 11.1 5 5 Tu 1 . - CDS 4656 - 5891 2154 ## COG1652 Uncharacterized protein containing LysM domain - Prom 6051 - 6110 5.5 + Prom 5857 - 5916 4.6 6 6 Op 1 26/0.000 + CDS 6156 - 6659 889 ## COG0242 N-formylmethionyl-tRNA deformylase 7 6 Op 2 . + CDS 6795 - 7721 1279 ## COG0223 Methionyl-tRNA formyltransferase 8 6 Op 3 . + CDS 7755 - 8273 596 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 9 6 Op 4 . + CDS 8320 - 9579 922 ## COG0144 tRNA and rRNA cytosine-C5-methylases 10 6 Op 5 . + CDS 9545 - 10138 637 ## NMO_1924 hypothetical protein 11 6 Op 6 8/0.000 + CDS 10142 - 12268 1991 ## COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 12 6 Op 7 2/0.500 + CDS 12255 - 13529 1751 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 13590 - 13619 0.5 + Prom 13611 - 13670 4.9 13 7 Op 1 8/0.000 + CDS 13764 - 14954 894 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 14 7 Op 2 2/0.500 + CDS 14979 - 15434 668 ## COG2922 Uncharacterized protein conserved in bacteria 15 7 Op 3 . + CDS 15514 - 17820 2999 ## COG0550 Topoisomerase IA + Term 17839 - 17892 14.4 - Term 17834 - 17872 4.1 16 8 Tu 1 . - CDS 17894 - 18586 697 ## NMC0111 hypothetical protein - Prom 18619 - 18678 4.6 + Prom 18572 - 18631 9.0 17 9 Op 1 . + CDS 18852 - 19424 237 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 + Prom 19449 - 19508 6.1 18 9 Op 2 . + CDS 19547 - 19798 459 ## COG1145 Ferredoxin + Term 19927 - 19995 30.4 + TRNA 19897 - 19980 67.7 # Tyr GTA 0 0 + TRNA 20013 - 20086 83.4 # Gly TCC 0 0 + TRNA 20096 - 20170 89.4 # Thr GGT 0 0 19 10 Tu 1 14/0.000 + CDS 20221 - 21405 1588 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 21486 - 21547 9.0 + TRNA 21412 - 21487 79.2 # Trp CCA 0 0 + Prom 21414 - 21473 80.0 20 11 Op 1 46/0.000 + CDS 21619 - 21894 122 ## COG0690 Preprotein translocase subunit SecE 21 11 Op 2 45/0.000 + CDS 21897 - 22430 522 ## COG0250 Transcription antiterminator + Term 22431 - 22490 6.0 + Prom 22450 - 22509 6.1 22 12 Op 1 55/0.000 + CDS 22535 - 22969 718 ## PROTEIN SUPPORTED gi|241760423|ref|ZP_04758517.1| ribosomal protein L11 23 12 Op 2 43/0.000 + CDS 22969 - 23664 1128 ## PROTEIN SUPPORTED gi|241760440|ref|ZP_04758534.1| ribosomal protein L1 + Term 23672 - 23713 8.8 + Prom 23799 - 23858 5.4 24 13 Op 1 47/0.000 + CDS 23888 - 24388 787 ## PROTEIN SUPPORTED gi|225076431|ref|ZP_03719630.1| hypothetical protein NEIFLAOT_01477 25 13 Op 2 28/0.000 + CDS 24447 - 24818 584 ## PROTEIN SUPPORTED gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 + Term 24837 - 24870 6.1 + Prom 24869 - 24928 7.7 26 14 Op 1 58/0.000 + CDS 25008 - 29186 4016 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Term 29193 - 29242 8.4 + Prom 29188 - 29247 1.9 27 14 Op 2 . + CDS 29343 - 32538 4336 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Predicted protein(s) >gi|241319087|gb|ACQV01000028.1| GENE 1 1 - 1375 681 458 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760426|ref|ZP_04758520.1| ## NR: gi|241760426|ref|ZP_04758520.1| hypothetical protein NEIFL0001_0302 [Neisseria flavescens SK114] # 1 458 1 458 458 664 100.0 0 MVEEEGSASSTLYSLGKAAANAMVIGGVAVTLFSLSQTAQAANSYETHETPVVAEQGTRE KSKNRDHNALLALGYDTKAGGRSTVVIGESSRLNGTFAMSLGNGINIDHGIAPQSVFLGK SIDDRYNQNKPRGHQSKYERSQVIGSNIYFGGLTNNKVDGLKQATLMGNDIQHSSEEQSN SMMTASNFVFKGIKAQDSAVNGHGITVNLTSPAKRAVLNRSSITGTNININSTGDINEML VSGTTISVTRQNNALGGALVGNNINFDSTGATVNTEKVNYVGQDINVTASSTSNPLFGQG IALHNSTLSGAPTFGQNIKSSNSTISNTLTQGYNTTFNEATVNDSVLTVNNATITGSLTN ATLMGRDINTIGNVVDTQVVGNRNTVTAWNTQVLGSGITANVNNSVYLGDASEVETVAGK ASTAGVGNYASGAMQDGVTANFSGGDNVVGAVTVGNAT >gi|241319087|gb|ACQV01000028.1| GENE 2 1784 - 2221 356 145 aa, chain + ## HITS:1 COG:no KEGG:APJL_0964 NR:ns ## KEGG: APJL_0964 # Name: not_defined # Def: DNA repair ATPase # Organism: A.pleuropneumoniae_JL03 # Pathway: not_defined # 1 143 1 143 144 177 67.0 8e-44 MGNKIYFSQIQAKIDRLQRERTQVLEHLELVERKIKKLNDALEVMEDEALTDEYDTEVYS YRTYKHRFRGKLRPMVLAVLKAQPDHYFTVNEITEIVLIKDRQDPIVRPKHMVSVRGALK HWLTKGVVERLERGVTDVKWRLKQK >gi|241319087|gb|ACQV01000028.1| GENE 3 2236 - 2610 209 124 aa, chain - ## HITS:1 COG:no KEGG:HD1609 NR:ns ## KEGG: HD1609 # Name: not_defined # Def: hypothetical protein # Organism: H.ducreyi # Pathway: not_defined # 1 123 1 123 123 118 59.0 6e-26 MAQKLLKYELVERLLKLKEKQDELTVQMQCLSQEINALAQPYIPKEPKPQPLITMRLVAQ VLRENPDWMFCGEIAEKSLALLGKPQFVDMGDKHYKTVNRILVKLRKRGIVESGLKFWRL KPLK >gi|241319087|gb|ACQV01000028.1| GENE 4 2822 - 4237 2058 471 aa, chain + ## HITS:1 COG:NMA0178 KEGG:ns NR:ns ## COG: NMA0178 COG2067 # Protein_GI_number: 15793206 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Neisseria meningitidis Z2491 # 6 471 6 464 464 660 76.0 0 MIHFNLKKTAFILSTALLSTAVQASGYHFGTQSVNAQGTANAAAAEAADASTIFYNPAGL TKLDSSQISVNANIVFPSIHYEAESAKHFRTGADVSGSTSGKITETTVAPHVYGAYKASD DVTLGLGVYVPFGSATEYEKDSVLRHNINKLGLTTIAIEPVVAWKLNEQHAVGAGLIAQY SKAELRKYSDWDASGAISQLASGLASRQAGRPIAVDATGKADGHADVKGHDWGFGYQLAW MWDINDRARVGVNYRSKVSHTLKGTADWEADGAYAKRAWDLGAMAARGYVPNEKASVKIV TPESLSVHGMYRATDKTNLFGDVTWTRHSRFNKAELVFENTKNVVNGKSNRTVITPNWRN TYKVAFGGSYQVTEPLQLRAGIAFDKSPVKSAEDRMNSLPDGNRIWFSVGAKYQLGKNHV IDAAYSHIHINDTVYRTGKASGNDVDSRGTSSARFKNKADILGLQYTYKFK >gi|241319087|gb|ACQV01000028.1| GENE 5 4656 - 5891 2154 411 aa, chain - ## HITS:1 COG:NMB0109 KEGG:ns NR:ns ## COG: NMB0109 COG1652 # Protein_GI_number: 15676037 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Neisseria meningitidis MC58 # 2 390 50 430 443 529 64.0 1e-150 MAGMAISAHTQAASLKIRPNAPQRYVVKNGDTLWGISGKYLYSPWQWNRLWGANRNAIRN PHLIYPGQVLVLRYINGQPRLGFEHAQTRSDGIPVIKLHPRVRETSGYGIPTVNVNLYRM FMKHPQIIAPEETANAPRLIAGPDNRVLYTQGNRVYAYGLTEPGRYLTYRVNKNITDPET GKFLGQEVVFSGIANTLPYTDSALENRTRASDEKLKSNEYYTQVNKAMKLRTQSAQPLVI EEAVSEIRKDDYLLKLPEGLDSFNVMPHAPARPIQAKVVSIFDGVGEAGQFQTITLDKGE LDGLDKGTVVSLYKRGRQVRVNLSNNLIRKPKDKDTVELVSIPAEEIGLAMVYRTSDHLA SAIILESLNSVSIGDTASEPGRDLDNMADEKTMDKPAEDEQEREIELEVRS >gi|241319087|gb|ACQV01000028.1| GENE 6 6156 - 6659 889 167 aa, chain + ## HITS:1 COG:NMA0164 KEGG:ns NR:ns ## COG: NMA0164 COG0242 # Protein_GI_number: 15793191 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Neisseria meningitidis Z2491 # 1 167 1 167 167 295 94.0 2e-80 MALLNILQYPDERLHTVAKPVEKIDERIQTLVADMFETMYEARGIGLAATQVDVHERIVV MDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVTRAERVKVEALNEKGEKFT LEADGLLAICVQHELDHLMGIVFVEHLSQLKQGRIKTKLKKRQKHAI >gi|241319087|gb|ACQV01000028.1| GENE 7 6795 - 7721 1279 308 aa, chain + ## HITS:1 COG:NMA0163 KEGG:ns NR:ns ## COG: NMA0163 COG0223 # Protein_GI_number: 15793190 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Neisseria meningitidis Z2491 # 1 308 1 308 308 495 87.0 1e-140 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKGRGMQLTASPVKQAALELSLTVA QPEKLRNNAEALQMLKDMGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAAP IQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVAD LQRLQAEGCLNAVKQPEEGVTYAQKLSKEEARIDWNESADIIERKIRAFNPVPAAWVEYQ DKPMKIWRAEVVAKQGKAGEVLSCTSDGLLVACGENALNITELQPSGSKRMSIQAFAAGR TIEVGTVL >gi|241319087|gb|ACQV01000028.1| GENE 8 7755 - 8273 596 172 aa, chain + ## HITS:1 COG:RSc0334 KEGG:ns NR:ns ## COG: RSc0334 COG2110 # Protein_GI_number: 17545053 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Ralstonia solanacearum # 4 166 8 167 171 194 60.0 5e-50 MAVFEVIEGDITRLAVDAIVNAANSSLLGGGGVDGAIHRAAGKELLDECRTLGGCRTGEA KITKGYRLPARYVIHTVGPVWFGGKQNEEAKLAQSYANSLLLAQKHNLHSIAFPCISTGV YRFPAEAAARIALESLKQTLPQCPAVEKIIFCCFSKTDAEYYRALLAAEQAV >gi|241319087|gb|ACQV01000028.1| GENE 9 8320 - 9579 922 419 aa, chain + ## HITS:1 COG:NMB0112 KEGG:ns NR:ns ## COG: NMB0112 COG0144 # Protein_GI_number: 15676040 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis MC58 # 1 419 1 419 419 766 90.0 0 MSMSLAQKLAADSVAAVAEGRNLQDVLAEIRAAHPQLTAQENGALQDIAYGCQRYLGSLK HMLGQMLKKPIDNPQLESLLLAAMYQLHYTRNAPHAVVNEAVESIAKIGRGQFRSFANAI LRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLRNHYPKHWHNITTALQSHPPMTLRVNR RHGNAESYLEKLAAEGIPARALDEYAVMLEEAVPVSRLPGFSDGLVSVQDFGAQRAAYLL NPKDGERILDACAAPGGKTGHILELADCHVTALDIDEGRLNRVKSNLDRLGFQTASLTCA DAQDLTAWYDGKAFDAVLADVPCTASGVARRNPDVKWLRRPTDAVKTARQQEALLDALWQ TLTKNGRMLLATCSVFVEENDGQLQKFLNRHADAELIESRVLLPNKHQDGFYYALIKKQ >gi|241319087|gb|ACQV01000028.1| GENE 10 9545 - 10138 637 197 aa, chain + ## HITS:1 COG:no KEGG:NMO_1924 NR:ns ## KEGG: NMO_1924 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 195 19 214 217 269 68.0 5e-71 MAFITRLLKSSKTLIVPLLLAVSLNAAGEGISATRAEAKLTHAGQLSVSSRFRTDLPDQL KEALKQGVPLHFNLSWQLSAPSMSSYKFKFDQLLNNDSTIQYKLSFHPLTNRYRVTVGTF STEYDTLETALRAVGAVVNWKVLSKGALSDVAAKDTKAEIRLLLTTAKLPKPFQINALTS KNWHLDSGWKSLSVVQE >gi|241319087|gb|ACQV01000028.1| GENE 11 10142 - 12268 1991 708 aa, chain + ## HITS:1 COG:NMB0114 KEGG:ns NR:ns ## COG: NMB0114 COG5000 # Protein_GI_number: 15676042 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation # Organism: Neisseria meningitidis MC58 # 1 706 1 706 706 1034 76.0 0 MRRFLLIAAVFAVVLLYGLTVATGSSNVLSDYFWWIVALCGLLLLVLAAVLVRYVVLLIR DNSKSVFGSQIARRLSGMFTLVAVLPGVFLFGISAQFINGTINSWFGNDTHEALERSLNL SKSALSLAVDNAVSNATPVQIDLISAASLDGNLGQTLVQSALTADFAQLALYNATTHKAE KSINPLKLNQPELNKEGWEQLEQTGSVRSLENIGGVLYAQGWMLIGTHKNQDYALFFRQP IPKDVAQDATLIEAARAKYAELSYTKKGLQTFFLSTLLVATLLAIFLALVMALYFARRFV APVLSLAEGARAVAQGDFSQTRPVFRNDEFGRLTQLFNHMTEQLAIAKEADERNRLREEA ARHYLECVLESLTTGVITLDADGRLKTFNKAAERILGVSLVSLWGSNWHQWHGKSPQQTL LADVFAAINETADSDKPVQVEYAAPDDARILLGKATILPEDNDNGVVMVIDDITVLMRAQ KEAAWGEVAKRLAHEIRNPLTPIQLSAERLAWKLHDKLDEQDAQILSRSTDTIVKQVAAL KEMVEAFRNYARAPSLNLEKQNLNGLVSEVLVLYEAGVCKFNARLSADTLPIVADTTAMR QVLHNLFKNAAEAAESDETPQVNVETGREGGQVFLTVCNNGKSFSKEMLHNAFEPYVTDK PTGTGLGLPVVKKIIEEHGGRISLSNQNSGGACVKIALPEMAETYAKQ >gi|241319087|gb|ACQV01000028.1| GENE 12 12255 - 13529 1751 424 aa, chain + ## HITS:1 COG:NMA0159 KEGG:ns NR:ns ## COG: NMA0159 COG2204 # Protein_GI_number: 15793186 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Neisseria meningitidis Z2491 # 1 424 1 425 425 558 69.0 1e-159 MRSSDILIVDDEVGIRDLLSEILQDEGYTVTLAENAEEARQLRYQTRPAMVLLDIWMPDC DGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDFLEKPIALQKLLSAVERAL KHGEVQTVSGMTLDKLGNSSVIQEMNGSIEAAAKHNRPLLFAGEAGSPFEIAARYLHKSG TPWVATDRVEHIVDMPMELLQKASGGILYVGDIARYSKNIQNGIAFLLEKADRYNVRVIA SCGFKRGESADDVVTGRLAELLKERIDVPSLCSQPDDIVFLINRIMTDLAESQKIQPVRF SDSALVVLRQYDWPGNYDQLAETVKNIMLESDGKEVDEQAVAVALGQKENATATEIIGGF NFNMPLRELREEVERRYFEYHIAQEGQNMSRVAQKVGLERTHLYRKLKQLGISVSRRSAD KSEE >gi|241319087|gb|ACQV01000028.1| GENE 13 13764 - 14954 894 396 aa, chain + ## HITS:1 COG:NMB0116 KEGG:ns NR:ns ## COG: NMB0116 COG0758 # Protein_GI_number: 15676044 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Neisseria meningitidis MC58 # 1 395 1 396 397 570 77.0 1e-162 MTENERFAWLQLAFTPYIGAESFLVLLQQFGSAQAALNAPADKIAALVRHKQAAESWRNA DKRALAQQSAEAALQWEMQDGCRLLLLQDDNFPEMLTQGITAPPVLFLRGNAELLHTPSA AIVGSRHATPQAMRIAKDFGRALSEKGIPVVSGMASGIDTAAHQGALQADGGTIAVWGTG IDRIYPPSNKNLAYEIAERGLIVSEFPLDTRPFAGNFPRRNRLIAALSQLTLVVEAALES GSLITAKLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILHECPQLLQNTP VPSYSINKTVKPKNDQTKRLQPKTIVDEPQRPSENLPAAPLTSALLEAMGYDPIHPDILA QQTNTAAADVYAQLLEYELDGIVAALPGGRYQRVKA >gi|241319087|gb|ACQV01000028.1| GENE 14 14979 - 15434 668 151 aa, chain + ## HITS:1 COG:NMA0157 KEGG:ns NR:ns ## COG: NMA0157 COG2922 # Protein_GI_number: 15793184 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 148 1 148 153 215 76.0 3e-56 MTEVIAYLIEHFQDFDNCPPPEDLGRLLEDAGFDATEIGNTLMMMEVLFNTSEFYAEPFN SDSLRVFCREEAENLPQEVMGLMQYLVTEHAITYEQREIVIHALMHIPSDEITLDTAKVL VLLVLWMHKSELPVLIGDDLMSALTGQNVMH >gi|241319087|gb|ACQV01000028.1| GENE 15 15514 - 17820 2999 768 aa, chain + ## HITS:1 COG:NMB0118_1 KEGG:ns NR:ns ## COG: NMB0118_1 COG0550 # Protein_GI_number: 15676046 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Neisseria meningitidis MC58 # 1 570 1 570 570 1101 99.0 0 MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAVDPDNGFAMKYQLISRN SKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKRGLKNIKPQRVVFHEITKN AVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSSAKQYKTKSKNAQEAHEAIRPTSVY RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW NPPIAETCPKCAWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE >gi|241319087|gb|ACQV01000028.1| GENE 16 17894 - 18586 697 230 aa, chain - ## HITS:1 COG:no KEGG:NMC0111 NR:ns ## KEGG: NMC0111 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 230 2 231 231 456 94.0 1e-127 MSDLNLSNSIFQGYNDKHGLMICGYEWGWSKADEAAYLAGEYKLPKNKIDHTFANKSLYF GEQAKKWRYDNTIKIWFEMWGHPLDENGLGGAFEKSLVQTNWAATQGNTIDNPDKFTQPE HIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQLVGKQTKPLETVQKEFNGTRF KIRFQSFENCEVVCLPHPSASRGLSYDYIALFEPEMNRILSDFKTTRGFK >gi|241319087|gb|ACQV01000028.1| GENE 17 18852 - 19424 237 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 159 1 165 199 95 32 3e-19 MANNKHSKHTNQVRIIGGQCRGRKLTFLSADGLRPTPDSVREKLFNWLGQDLTGKTVLDL FSGSGALGMEAASRNAAKVVMVDNHRQTVQTLQKNIRELGLKQVEIVCSDGMAYLARPSE KFDVVFLDPPFAWEDWQNLFIRLQSHLKNGAMVYIEAGKLPEKPDWLEVYREGKAGMSRF ELLLYSQVAE >gi|241319087|gb|ACQV01000028.1| GENE 18 19547 - 19798 459 83 aa, chain + ## HITS:1 COG:NMB0123 KEGG:ns NR:ns ## COG: NMB0123 COG1145 # Protein_GI_number: 15676051 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Neisseria meningitidis MC58 # 1 83 1 83 83 132 98.0 2e-31 MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGHYDEPQCQQVCPVDCIL IDEEHPETHEELMAKYEKIIQFK >gi|241319087|gb|ACQV01000028.1| GENE 19 20221 - 21405 1588 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 616 74 1e-176 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE GDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVG DEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTIT PHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTIT VELIAPIAMEEGLRFAIREGGRTVGAGVVSSVIA >gi|241319087|gb|ACQV01000028.1| GENE 20 21619 - 21894 122 91 aa, chain + ## HITS:1 COG:NMB0125 KEGG:ns NR:ns ## COG: NMB0125 COG0690 # Protein_GI_number: 15676053 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Neisseria meningitidis MC58 # 1 91 1 92 92 104 63.0 4e-23 MTEHPSGRKEDHQKKEVVVSNKPAPKKKEGLFAYFKSSWTEFKKVVWPSRDEAVKMTVFV IIFVAVLAAFIYAADTIISWLFFDVLLNRKG >gi|241319087|gb|ACQV01000028.1| GENE 21 21897 - 22430 522 177 aa, chain + ## HITS:1 COG:NMA0147 KEGG:ns NR:ns ## COG: NMA0147 COG0250 # Protein_GI_number: 15793175 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Neisseria meningitidis Z2491 # 1 177 1 177 178 286 85.0 1e-77 MSKRWYVVQAYSGFEKNVQKTLKERIARENMEEYFGQILVPVEEVVDIKNGRKTISERKF YPGYVLVEMEMTDDSWHLVKSTPRVNGFVGGSGNRPIPISQKDADAILQQAKTGVEKPKP KVEFEVGQQVRVNEGPFADFNGIVDEVNYERNRLRVSVQIFGRETPVELEFGQVEKI >gi|241319087|gb|ACQV01000028.1| GENE 22 22535 - 22969 718 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241760423|ref|ZP_04758517.1| ribosomal protein L11 [Neisseria flavescens SK114] # 1 144 1 144 144 281 100 5e-75 MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAATQGMEPGLPIPVVIT AFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLARAQLEEIAKTKEPDLTAA DLDAAVRTIAGSARSMGLDVEGVV >gi|241319087|gb|ACQV01000028.1| GENE 23 22969 - 23664 1128 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241760440|ref|ZP_04758534.1| ribosomal protein L1 [Neisseria flavescens SK114] # 1 231 1 231 231 439 100 1e-122 MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDVSFNLGVDPRKSDQVIR GSVVLPKGTGKTTRVAVFTQGANADAAKEAGADIVGFEDLAAEIKAGNLNFDVVIASPDA MRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVQYRTDKAGIVHATIGRASF VEADLKENFNALLDAIVKAKPAAAKGQYLKKVAVSSTMGLGVRVDTASVNN >gi|241319087|gb|ACQV01000028.1| GENE 24 23888 - 24388 787 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076431|ref|ZP_03719630.1| hypothetical protein NEIFLAOT_01477 [Neisseria flavescens NRL30031/H210] # 1 166 1 166 166 307 99 5e-83 MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRANARKEGVYLRVLKNTLA RRAVEGTSFAGLADQMVGPLVYAASEDAVAAAKVLHQFAKKDDKIIVKAGSYNGEVMNPA QVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKKAGEEAA >gi|241319087|gb|ACQV01000028.1| GENE 25 24447 - 24818 584 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225076432|ref|ZP_03719631.1| hypothetical protein NEIFLAOT_01478 [Neisseria flavescens NRL30031/H210] # 1 123 1 123 123 229 100 2e-59 MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPAGAGAAAAEEKTEFDVV LASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTLKEGVSKAEAEDIQKQLEEAGAKV EIK >gi|241319087|gb|ACQV01000028.1| GENE 26 25008 - 29186 4016 1392 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 4 1391 8 1389 1392 1551 56 0.0 MSYSFTEKKRIRKSFAKRENVLDVPFLLATQIDSYAKFLQLENAFDQRTDDGLQAAFNSI FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSNG VQTDLIAGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPENLIGK ALAVDLIDPETGEVLASANDEITEELLAKLDIHGVKEITTLYINELDQGGYISSTLRTDE TADQQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS EAQQNSWYGRLLNETLAGVAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN SLSVYARTNDYGFLETPYRRVVDGKVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDL VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVVRVHDDEATAGEVGVDIYNL VKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYE DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV FTREGIQRDKRAQSIIDSELKRYRQDLGDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK GSEITTEYLASLSSKHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQG DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNSSGKKEDLD SLTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQI TLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEI RSLGLDIDLERY >gi|241319087|gb|ACQV01000028.1| GENE 27 29343 - 32538 4336 1065 aa, chain + ## HITS:1 COG:NMA0141 KEGG:ns NR:ns ## COG: NMA0141 COG0086 # Protein_GI_number: 15793169 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 1065 1 1065 1391 2092 99.0 0 MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA KMGAEGIRELLRTLDITGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYINKALKK KEISKLINASFRLCGLRETVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRER ILGRVTASDVVDPSTGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGEAIKAGQTL ATWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVI Prediction of potential genes in microbial genomes Time: Thu May 26 11:59:33 2011 Seq name: gi|241318952|gb|ACQV01000029.1| Neisseria flavescens SK114 ctg1118407793870, whole genome shotgun sequence Length of sequence - 114922 bp Number of predicted genes - 110, with homology - 106 Number of transcription units - 70, operones - 31 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 71 - 130 3.4 1 1 Tu 1 . + CDS 226 - 537 217 ## gi|241760520|ref|ZP_04758613.1| conserved hypothetical protein + Prom 561 - 620 2.4 2 2 Op 1 . + CDS 736 - 813 57 ## 3 2 Op 2 . + CDS 810 - 1154 422 ## NGK_1971 FMN oxidoreductase CC3083 - Term 1229 - 1288 0.9 4 3 Op 1 . - CDS 1388 - 1456 62 ## 5 3 Op 2 . - CDS 1437 - 1790 259 ## COG0406 Fructose-2,6-bisphosphatase - Prom 1936 - 1995 3.3 + Prom 1770 - 1829 2.2 6 4 Tu 1 . + CDS 1865 - 2671 560 ## COG2801 Transposase and inactivated derivatives 7 5 Op 1 10/0.000 - CDS 2731 - 4239 1522 ## COG0029 Aspartate oxidase 8 5 Op 2 . - CDS 4291 - 5403 1203 ## COG0379 Quinolinate synthase - Prom 5466 - 5525 5.0 + Prom 5443 - 5502 7.8 9 6 Op 1 2/0.174 + CDS 5560 - 6498 993 ## COG4111 Uncharacterized conserved protein 10 6 Op 2 . + CDS 6575 - 7456 425 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 + Term 7618 - 7658 1.1 - Term 7605 - 7646 5.0 11 7 Op 1 5/0.000 - CDS 7676 - 9766 1765 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 12 7 Op 2 5/0.000 - CDS 9589 - 10482 716 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 13 7 Op 3 . - CDS 10479 - 10691 321 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 14 8 Tu 1 . + CDS 11396 - 11545 101 ## gi|241760474|ref|ZP_04758567.1| hypothetical protein NEIFL0001_1070 + Term 11631 - 11675 2.5 - Term 11413 - 11440 -0.4 15 9 Tu 1 . - CDS 11556 - 12542 986 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - Prom 12576 - 12635 5.3 + Prom 12557 - 12616 5.6 16 10 Tu 1 . + CDS 12640 - 13494 1173 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 13516 - 13561 10.6 - Term 13504 - 13549 14.4 17 11 Tu 1 . - CDS 13666 - 13779 66 ## gi|241760547|ref|ZP_04758640.1| hypothetical protein NEIFL0001_1073 + Prom 13717 - 13776 4.2 18 12 Op 1 . + CDS 13806 - 16004 2687 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 19 12 Op 2 8/0.000 + CDS 16079 - 16870 1044 ## COG4558 ABC-type hemin transport system, periplasmic component 20 12 Op 3 35/0.000 + CDS 17013 - 17954 690 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 21 12 Op 4 1/0.174 + CDS 18001 - 18726 180 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 18825 - 18864 -1.0 + Prom 18913 - 18972 8.5 22 13 Op 1 . + CDS 19001 - 20821 1726 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 20823 - 20859 2.6 + Prom 20825 - 20884 1.9 23 13 Op 2 . + CDS 20914 - 21531 843 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 21643 - 21691 11.3 - Term 21631 - 21679 11.3 24 14 Tu 1 . - CDS 21814 - 22188 193 ## COG3737 Uncharacterized conserved protein - Prom 22329 - 22388 5.7 + Prom 22274 - 22333 2.7 25 15 Op 1 . + CDS 22395 - 23702 1968 ## COG0460 Homoserine dehydrogenase 26 15 Op 2 . + CDS 23695 - 24129 499 ## NMC1129 hypothetical protein + Term 24159 - 24194 6.1 + Prom 24176 - 24235 6.8 27 16 Tu 1 . + CDS 24263 - 24769 343 ## Sterm_3798 hypothetical protein + Term 24779 - 24820 8.9 - Term 24762 - 24813 13.6 28 17 Op 1 . - CDS 24816 - 25532 569 ## COG0005 Purine nucleoside phosphorylase 29 17 Op 2 . - CDS 25598 - 26668 1264 ## COG0628 Predicted permease - Prom 26710 - 26769 6.4 + Prom 26719 - 26778 7.7 30 18 Tu 1 . + CDS 26874 - 27908 1029 ## PROTEIN SUPPORTED gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 + Term 27921 - 27966 8.2 - Term 27916 - 27948 3.2 31 19 Tu 1 . - CDS 27983 - 29194 2041 ## COG0282 Acetate kinase - Prom 29240 - 29299 2.8 - Term 29462 - 29492 -1.0 32 20 Op 1 5/0.000 - CDS 29502 - 30671 1613 ## COG2828 Uncharacterized protein conserved in bacteria 33 20 Op 2 3/0.087 - CDS 30789 - 33395 3568 ## COG1048 Aconitase A - Prom 33534 - 33593 4.3 34 21 Op 1 9/0.000 - CDS 33798 - 34952 1908 ## COG0372 Citrate synthase - Prom 34976 - 35035 2.4 35 21 Op 2 . - CDS 35037 - 35912 1065 ## COG2513 PEP phosphonomutase and related enzymes - Term 36004 - 36059 -0.6 36 22 Tu 1 . - CDS 36237 - 36332 114 ## - Prom 36375 - 36434 12.0 37 23 Op 1 . - CDS 36679 - 37101 360 ## NGO1505 hypothetical protein 38 23 Op 2 2/0.174 - CDS 37103 - 37906 788 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 37956 - 37989 2.8 39 24 Op 1 8/0.000 - CDS 38060 - 38437 690 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 40 24 Op 2 9/0.000 - CDS 38525 - 39253 1126 ## COG0854 Pyridoxal phosphate biosynthesis protein 41 24 Op 3 . - CDS 39322 - 40065 600 ## COG1381 Recombinational DNA repair protein (RecF pathway) - Prom 40088 - 40147 4.6 + Prom 40137 - 40196 5.7 42 25 Op 1 . + CDS 40218 - 41660 1588 ## Asuc_2041 patatin + Prom 41662 - 41721 1.8 43 25 Op 2 . + CDS 41773 - 42507 950 ## COG1636 Uncharacterized protein conserved in bacteria + Term 42516 - 42553 9.1 - Term 42498 - 42544 15.2 44 26 Tu 1 . - CDS 42559 - 42891 441 ## NMC1229 hypothetical protein + Prom 43086 - 43145 3.9 45 27 Op 1 . + CDS 43283 - 45562 3620 ## COG0209 Ribonucleotide reductase, alpha subunit 46 27 Op 2 . + CDS 45617 - 45844 122 ## Cphamn1_2547 hypothetical protein 47 27 Op 3 . + CDS 45886 - 47040 1699 ## COG0208 Ribonucleotide reductase, beta subunit + Term 47047 - 47097 7.2 48 28 Op 1 . + CDS 47116 - 47493 358 ## Clim_0564 hypothetical protein 49 28 Op 2 . + CDS 47555 - 47854 131 ## COG0633 Ferredoxin + Term 47859 - 47929 8.1 - Term 47847 - 47915 8.6 50 29 Tu 1 . - CDS 47931 - 48500 650 ## COG1584 Predicted membrane protein - Prom 48564 - 48623 8.3 - Term 48571 - 48619 14.3 51 30 Op 1 . - CDS 48635 - 49384 622 ## COG0710 3-dehydroquinate dehydratase 52 30 Op 2 . - CDS 49412 - 51253 2111 ## COG0322 Nuclease subunit of the excinuclease complex - Term 51263 - 51303 10.6 53 31 Op 1 . - CDS 51318 - 54089 4177 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 54119 - 54178 2.0 54 31 Op 2 . - CDS 54217 - 54699 589 ## COG1607 Acyl-CoA hydrolase - Prom 54724 - 54783 2.5 55 32 Tu 1 . - CDS 54814 - 55884 1190 ## COG0598 Mg2+ and Co2+ transporters - Prom 55909 - 55968 4.0 - Term 55921 - 55962 11.3 56 33 Tu 1 . - CDS 55986 - 57344 1831 ## NMA1449 putative glutamate--cysteine ligase (EC:6.3.2.2) - Prom 57493 - 57552 5.4 + Prom 57407 - 57466 4.4 57 34 Op 1 . + CDS 57610 - 59019 2288 ## COG0065 3-isopropylmalate dehydratase large subunit 58 34 Op 2 . + CDS 59145 - 59399 520 ## NMC1178 putative lipoprotein + Term 59404 - 59465 13.5 + Prom 59404 - 59463 3.5 59 35 Op 1 . + CDS 59503 - 59868 428 ## COG3324 Predicted enzyme related to lactoylglutathione lyase 60 35 Op 2 . + CDS 59914 - 60555 975 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 60565 - 60611 9.0 61 36 Op 1 . + CDS 60620 - 61081 479 ## COG2731 Beta-galactosidase, beta subunit 62 36 Op 2 . + CDS 61120 - 61983 859 ## Sde_3848 pectate lyase/Amb allergen 63 36 Op 3 . + CDS 62050 - 63120 1649 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 63139 - 63172 2.0 - Term 63181 - 63212 4.1 64 37 Tu 1 . - CDS 63248 - 64642 2223 ## COG0513 Superfamily II DNA and RNA helicases + Prom 64896 - 64955 4.6 65 38 Op 1 . + CDS 64983 - 65378 416 ## gi|241760528|ref|ZP_04758621.1| putative glycosyltransferase 66 38 Op 2 . + CDS 65393 - 66364 1353 ## COG1092 Predicted SAM-dependent methyltransferases + Prom 66406 - 66465 4.3 67 38 Op 3 . + CDS 66486 - 66827 178 ## NMB1350 hypothetical protein + Term 66886 - 66942 20.1 + Prom 66909 - 66968 3.9 68 39 Tu 1 . + CDS 66998 - 68179 1881 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 68239 - 68293 16.1 + Prom 68312 - 68371 2.6 69 40 Op 1 . + CDS 68404 - 69339 800 ## COG0167 Dihydroorotate dehydrogenase + Term 69361 - 69403 13.5 + Prom 69348 - 69407 4.3 70 40 Op 2 . + CDS 69431 - 71431 2706 ## COG0210 Superfamily I DNA and RNA helicases + Term 71437 - 71478 9.6 + Prom 71649 - 71708 7.1 71 41 Tu 1 . + CDS 71738 - 75634 5132 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 75669 - 75732 10.6 + Prom 75814 - 75873 5.8 72 42 Tu 1 . + CDS 75932 - 76750 430 ## COG3440 Predicted restriction endonuclease + Term 76778 - 76841 6.4 + Prom 76832 - 76891 3.5 73 43 Op 1 . + CDS 76935 - 78020 835 ## gi|241760572|ref|ZP_04758665.1| hypothetical protein NEIFL0001_1141 74 43 Op 2 . + CDS 78044 - 78793 1039 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 78818 - 78861 12.0 - Term 78803 - 78852 13.7 75 44 Tu 1 . - CDS 78864 - 80429 2426 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Prom 80512 - 80571 5.3 - Term 80492 - 80545 7.2 76 45 Op 1 . - CDS 80578 - 80904 483 ## gi|284799942|ref|ZP_05985282.2| putative transmembrane protein - Prom 80931 - 80990 3.5 77 45 Op 2 . - CDS 81091 - 81543 724 ## COG0756 dUTPase - Prom 81576 - 81635 7.1 + Prom 81517 - 81576 4.2 78 46 Tu 1 . + CDS 81655 - 82287 844 ## COG0259 Pyridoxamine-phosphate oxidase + Term 82349 - 82385 4.1 79 47 Tu 1 . + CDS 82447 - 83505 1506 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Term 83784 - 83823 9.3 80 48 Tu 1 . - CDS 83895 - 84536 215 ## PM0283 hypothetical protein - Prom 84582 - 84641 5.5 81 49 Tu 1 . - CDS 84764 - 86293 114 ## PM0282 hypothetical protein - Prom 86501 - 86560 4.5 + Prom 86855 - 86914 3.0 82 50 Tu 1 . + CDS 86940 - 87893 1429 ## COG0039 Malate/lactate dehydrogenases + Term 87910 - 87970 20.4 - Term 88180 - 88228 10.5 83 51 Op 1 . - CDS 88241 - 88990 459 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Term 88999 - 89046 9.2 84 51 Op 2 5/0.000 - CDS 89053 - 89361 238 ## COG4541 Predicted membrane protein 85 51 Op 3 . - CDS 89358 - 90068 670 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 90097 - 90156 4.8 + Prom 90085 - 90144 4.9 86 52 Tu 1 . + CDS 90171 - 91145 1839 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase + Term 91163 - 91204 9.6 + Prom 91175 - 91234 6.0 87 53 Tu 1 . + CDS 91267 - 92253 1376 ## COG0039 Malate/lactate dehydrogenases + Term 92260 - 92301 9.6 - Term 92243 - 92293 14.1 88 54 Tu 1 . - CDS 92304 - 93740 1262 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 93954 - 94013 4.0 + Prom 93913 - 93972 4.4 89 55 Tu 1 . + CDS 94070 - 95842 1258 ## COG0358 DNA primase (bacterial type) - Term 95888 - 95924 -0.1 90 56 Tu 1 . - CDS 95927 - 96013 56 ## - Prom 96049 - 96108 2.2 + Prom 95862 - 95921 3.5 91 57 Tu 1 . + CDS 96037 - 97989 2994 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 97992 - 98035 5.4 - Term 97974 - 98025 4.6 92 58 Tu 1 . - CDS 98108 - 99460 1085 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 99621 - 99680 5.0 + Prom 99427 - 99486 6.2 93 59 Op 1 . + CDS 99676 - 99861 417 ## NMO_1274 hypothetical protein 94 59 Op 2 2/0.174 + CDS 99874 - 100542 773 ## COG4122 Predicted O-methyltransferase 95 59 Op 3 2/0.174 + CDS 100557 - 101312 721 ## COG1729 Uncharacterized protein conserved in bacteria + Term 101316 - 101362 7.3 96 60 Op 1 . + CDS 101392 - 101877 823 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase + Term 101900 - 101941 -0.9 + Prom 101879 - 101938 3.7 97 60 Op 2 . + CDS 101974 - 102306 357 ## Coch_0293 hypothetical protein + Term 102335 - 102383 10.4 - Term 102318 - 102377 13.2 98 61 Tu 1 . - CDS 102389 - 104182 2478 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 104233 - 104292 6.9 + Prom 104279 - 104338 3.7 99 62 Tu 1 . + CDS 104409 - 105524 865 ## COG2890 Methylase of polypeptide chain release factors + Term 105527 - 105572 8.3 - Term 105567 - 105602 5.1 100 63 Op 1 2/0.174 - CDS 105646 - 106119 858 ## COG2193 Bacterioferritin (cytochrome b1) 101 63 Op 2 . - CDS 106149 - 106613 836 ## COG2193 Bacterioferritin (cytochrome b1) - Prom 106740 - 106799 7.0 + Prom 106932 - 106991 9.6 102 64 Tu 1 . + CDS 107033 - 108844 2777 ## COG1217 Predicted membrane GTPase involved in stress response + Term 108875 - 108944 10.2 103 65 Tu 1 . - CDS 108946 - 109902 630 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 109953 - 110012 4.0 + Prom 109940 - 109999 3.3 104 66 Tu 1 . + CDS 110031 - 110366 755 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Prom 110396 - 110455 4.3 105 67 Tu 1 . + CDS 110479 - 110847 663 ## COG0607 Rhodanese-related sulfurtransferase + Term 110867 - 110906 9.1 - Term 110853 - 110892 9.1 106 68 Tu 1 . - CDS 110903 - 111241 436 ## DNO_0103 hypothetical protein - Prom 111305 - 111364 3.0 + Prom 111195 - 111254 1.9 107 69 Op 1 2/0.174 + CDS 111340 - 112095 874 ## COG0496 Predicted acid phosphatase + Prom 112097 - 112156 4.5 108 69 Op 2 1/0.174 + CDS 112189 - 113100 1013 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 113128 - 113174 13.8 109 70 Op 1 . + CDS 113179 - 114702 1536 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 110 70 Op 2 . + CDS 114725 - 114920 59 ## gi|241760525|ref|ZP_04758618.1| lipoprotein Predicted protein(s) >gi|241318952|gb|ACQV01000029.1| GENE 1 226 - 537 217 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760520|ref|ZP_04758613.1| ## NR: gi|241760520|ref|ZP_04758613.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 103 1 103 103 181 100.0 1e-44 MNIGNFGSGNLYVSNGGQVIGEFEGTEPTPHFWGWLRDTPEDVTNTVISVTGKGSLLQYP KNAEIRVAASDWSSKTNTVNVLVADESKLTAGTLRVGNGTTNI >gi|241318952|gb|ACQV01000029.1| GENE 2 736 - 813 57 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDISSNVSITNGTLEVGRDSAKLR >gi|241318952|gb|ACQV01000029.1| GENE 3 810 - 1154 422 114 aa, chain + ## HITS:1 COG:no KEGG:NGK_1971 NR:ns ## KEGG: NGK_1971 # Name: not_defined # Def: FMN oxidoreductase CC3083 # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 1 114 290 403 403 207 92.0 1e-52 MIITGGFRSQNAMEDALASGHLDLVGVARPFALVPDLANKMQNGTYQTVQTDRIQTGVAL VDKKAGAMLEMNWYMTQMDLIGQGKQPNPKLSAWKVLLKTLWENGKAGLSTGRA >gi|241318952|gb|ACQV01000029.1| GENE 4 1388 - 1456 62 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWLIYNDHNLLPNSHIDTLLVC >gi|241318952|gb|ACQV01000029.1| GENE 5 1437 - 1790 259 117 aa, chain - ## HITS:1 COG:PM0634 KEGG:ns NR:ns ## COG: PM0634 COG0406 # Protein_GI_number: 15602499 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Pasteurella multocida # 3 116 95 209 216 105 49.0 3e-23 MQIADLRKLTEFKQLTNDPAAYKALSNGGETFEQLAVRAMAALYDIIKVHQSGANILVIS HGHTLRLLLSLLGGATLENHRDEGKSVSLLNTSISIVKYDSESGFHIEQLNNVAHLQ >gi|241318952|gb|ACQV01000029.1| GENE 6 1865 - 2671 560 268 aa, chain + ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 59 259 45 251 263 100 32.0 3e-21 MNMHKNTRLTPHHRQAIWLAYTQGKESVTSLARRYQVSRVTIYRALKAARGRLLKPQTST NNRFKQAKYGMKRLAKVERGIQEKLKRQAKRYNKSYPGELVHLDTKRLPLLKGQKVTDKR NYLFVAIDDFSRELYAAILPDKTADSAAKFLTGHLIDPCPYLIECVYSDNGTKYKGSANH AFSVACYENGIGQKFTRVARPQTNGKAERVIRTLMEMWHEKQLFDSPEHRRKELCRFVNF YNTVKPHRSLNGDTPFEVLQAYFSQPVV >gi|241318952|gb|ACQV01000029.1| GENE 7 2731 - 4239 1522 502 aa, chain - ## HITS:1 COG:NMB0392 KEGG:ns NR:ns ## COG: NMB0392 COG0029 # Protein_GI_number: 15676306 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Neisseria meningitidis MC58 # 1 502 1 502 502 907 95.0 0 MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRHAQGGIAAAWSGEDDIE KHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDRNHNDLHLTREGGHTCRRI AHVADYTGEAVMQSLIAQIRCRPNIRVCERQMALDIQTESGAACGLTVLDCRTQETYCIR ARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCAVENLEFIQFHPTGLARSSENGR TFLISEAVRGEGGILTNQSGERFMPHYDRRAELAPRDIVARAIAAEIAKQTQDFASLDIS HQPAAFVRQHFPSIHRHCLSQCGLDITRQAIPVRPVQHYTCGGIQTDPCGRTSLPQLYAL GETACTGLHGANRLASNSLLECVVTARLAAQTIANGQAFQTAQSQRSSENPTAEADIFSD DLQNTFSRPVLQAFNQRHLGILRNDTGLRRVIAQLRLWKQNQAEPHTASEYENRNLLECS LAVAQAAYRRRQNIGAHFNSDC >gi|241318952|gb|ACQV01000029.1| GENE 8 4291 - 5403 1203 370 aa, chain - ## HITS:1 COG:NMA2090 KEGG:ns NR:ns ## COG: NMA2090 COG0379 # Protein_GI_number: 15794965 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Neisseria meningitidis Z2491 # 1 370 1 370 370 734 97.0 0 MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRLKDEIKALLKEKNAVLV AHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEADTLVVAGVRFMGESAKILCPEKTVL MPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAAVKARADWVVTSSVALEIVSY LKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVHNEFKGQELAALKAEHPDAVVLV HPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVATDLGILHEMQKQAPDKEFIAAPTA GNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEILLDRKLGKAAKLPLQRMLDFAAGLKR GNVFNGMGPA >gi|241318952|gb|ACQV01000029.1| GENE 9 5560 - 6498 993 312 aa, chain + ## HITS:1 COG:NMB0395 KEGG:ns NR:ns ## COG: NMB0395 COG4111 # Protein_GI_number: 15676309 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 312 1 312 312 602 96.0 1e-172 MDAYPETAANTQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGPLSPLRNSLQAGVKPWV AKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREAADSILHPDAKWQDCYDYF PWEDLRTDGGQRDAIVSRLRIWANSADTEEVRQKRLKRIHLCWGVEPENWSEEYVLQRYE MLHESGLIAEAAEPQANFDFALTGQPMRHDHRRVLATALSRLRAKIKYRPVIFELMPPEF TLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSDTGVSGSKGRPAQLYRFRDDVLPDQ LISDIGLPLGSR >gi|241318952|gb|ACQV01000029.1| GENE 10 6575 - 7456 425 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 15 292 11 285 286 168 36 1e-40 MSSENNLLPIPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKTAKLFLVSREDGVIAGM DLARLAFQTMDPSVRFQAEIQDGQAVRAGQTLAAVEGNARALLAAERTALNYLTHLSGIA TATALAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGGVNHRMGLDDAVLIKDNHLAY CGSITQAVRQARQAVGPLTCVEIEVDTLAQLDEAIAAGAERILLDNMDDETLKEAANRCH TQTTHPHTIYCEASGGIGFDRLKRVAQTSVDGIALGYLTHSSRSLDIGLDFVA >gi|241318952|gb|ACQV01000029.1| GENE 11 7676 - 9766 1765 696 aa, chain - ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 321 696 639 989 989 133 29.0 1e-30 MAADMGQTAFLQYRLFMEARGQPLDRFRCTLWTTRTNSKTNTAGGSPGDTVYEDNKFQIA WDEYDRWQKSTPEERRELLDAGFGTPKPPKPETPNTNGRFNTIEGNAYYARNNRTGFQFS NRMKLSDKLSLTLMGDFQNEKLTSRNDFSDELERGGYDKYREELENSTIRANYELNQYGV PRNGKRREYNLGFNFRYEPFRWLTLMAGGRYTNFQLQDKSKRLESGTYKTGYPLEMNRGI KYSIGRVATPQEYADYKAIDDALANGSLDYALYMADEYSEQRKKHKQISLYSFQVNSQYI PTLTDDREKWGNPNEKVDFYWLKDDKGRLNMQDHPLTNGSIPDLHTKVANPVYDSSIPDS PQFVPKYYAASASVYTTPMTEAERQRAMKQKGSGWVPAFSATVNFTDYSRAYLHYTETLR YPSIFEGTYGFSTAAGSFNRMGYGWRPEHAKNWEVGYIHDLTGLLPKMKKADFRINYFHN KTKNVIDRDDNLEFEQFDRQIRSGAELSTRFDTRRVFGSLNVFRSLKNKMCDENFPWTSA TEGMVDSSYFVQNGKTMNRPVCNHGGLTDSGYLASALQPRWSIDAELGSRFLVNKLETGV RFHYHSRVYENRNDAWQPFYDVRNKYLNDNMNPQHNDMRWQPVAVWDAYLRYKIGKNLTA ELVGSNLTNRYYLDPMSRSYMPAPGRTIRIGITGKW >gi|241318952|gb|ACQV01000029.1| GENE 12 9589 - 10482 716 297 aa, chain - ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 4 266 278 484 989 80 27.0 4e-15 MKSGIGGSVALKTIDADDIVPEGQKYGFEVKAEAANNSIKQRANIYEKSVDYRTLDDPTV ALGGIWRAMWDDTDRVSQRFSGRNKFGEDKAYRIAAATKQDNFDAMLAYTYRSKGNYFSG KKGAERYGYIGPWTQETLDELKRRQEEAAAKGKKFYGSENMLGAPDISKIGLFYHPGGEV SNTSLETKSWVGKTTFRLPNRQTLKFGLRHTDSTFGEIMPSRIIGPISWDASVLNKIAEW LQTWVKQRSYNIDYSWKPEGSRWIDFDARFGQRAPIPKPIPQAAHPAIPFMRTTNFK >gi|241318952|gb|ACQV01000029.1| GENE 13 10479 - 10691 321 70 aa, chain - ## HITS:1 COG:PA4897 KEGG:ns NR:ns ## COG: PA4897 COG1629 # Protein_GI_number: 15600090 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 10 70 217 279 989 67 50.0 4e-12 MSGMSGVYSGALDPNIRGVQGQGWIPVTIDGMEQAITVWRGYAGANKGNYVAPNIISSVS IEKALRSAVI >gi|241318952|gb|ACQV01000029.1| GENE 14 11396 - 11545 101 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760474|ref|ZP_04758567.1| ## NR: gi|241760474|ref|ZP_04758567.1| hypothetical protein NEIFL0001_1070 [Neisseria flavescens SK114] # 1 49 1 49 49 91 100.0 2e-17 MRRELDEVNTPALGKYLSDFHVLFRLRQFGGKLGFSGDLRSSPHSGILD >gi|241318952|gb|ACQV01000029.1| GENE 15 11556 - 12542 986 328 aa, chain - ## HITS:1 COG:ECs0399 KEGG:ns NR:ns ## COG: ECs0399 COG4977 # Protein_GI_number: 15829653 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Escherichia coli O157:H7 # 19 326 6 313 317 276 43.0 5e-74 MSSENERNEFRQNQTVPKIVLYAQSGMNDFVFNIPFSVFQTTYRDNPLLDLKICSDDSKD VITALGASIPVHGGLDLTEEADIIVIAGWRNIEEAPTPELSAHLQKAVQRGAHITALCYG TYALAYTGLLDGRTAATHWLAEDDFVRRFPKIHLDTNRLYAEDGNFLTSAGAAGGLDCCL YLIRKIHGATVANDLARTLVAAPHREGGQAQFIHRPVERRTADDKINHLLDELRQNLATP YRLDDLAKKLAVSRRTFIRHFSQATGMNFGEWLTTERLWQAQDLLENTDLPIERIAEQSG FGSAANLRLQFKAKFKINPNAWRKVFGR >gi|241318952|gb|ACQV01000029.1| GENE 16 12640 - 13494 1173 284 aa, chain + ## HITS:1 COG:ECs0400 KEGG:ns NR:ns ## COG: ECs0400 COG2220 # Protein_GI_number: 15829654 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 27 281 9 260 262 238 47.0 1e-62 MKFKKFILATVLGATAFSAWADDSYQHIRNATAKVEYAGQTFLIDPFFAPKHSMNGFAGT FNNQAKMPLVGLPMSVNKILDGVDAVIVTHTHEDHWDETAARSIPKNLPVYVQHQADAAK IRSQGFTDVRVLNGSAVFNGVTISKTGGVHGTEAMYANPQLAEILGDAMGVVFQSSGHKT AYIMGDTVWTADVNKALNRYKPDYLIMNTGYALISGISDGIIMGTADDVLKASQVMPKAK IITVHMDTVNHTAVSRADMRKFIRGQGIESRVNVPEDGEILKLD >gi|241318952|gb|ACQV01000029.1| GENE 17 13666 - 13779 66 37 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760547|ref|ZP_04758640.1| ## NR: gi|241760547|ref|ZP_04758640.1| hypothetical protein NEIFL0001_1073 [Neisseria flavescens SK114] # 1 37 1 37 37 73 100.0 4e-12 MVCIYKINRRFLQVWELQDSTNKGAEHMYSSDYACLL >gi|241318952|gb|ACQV01000029.1| GENE 18 13806 - 16004 2687 732 aa, chain + ## HITS:1 COG:alr2153 KEGG:ns NR:ns ## COG: alr2153 COG1629 # Protein_GI_number: 17229645 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Nostoc sp. PCC 7120 # 27 732 98 802 802 305 31.0 1e-82 MKKKAIACVVGAVFSGQLYAAQMPVAQAEIEPVVVTADRNAQTLDKAAPNVSVVGRKTLN QASAQNLDDIMMYESGVSVPSDNNRRGHAGINIRGIDGNRILMMVDGVRIPESYTGGGSN GAISGRDMVESDTLKQVDIVKGPYSALYGSDALGGVVNMVTLSPSDFVDAGKRGHFGLKH GYRSRDRSHGVTATAAGFHENAEGLLMLTRRQGHETENMGGDKSYSTSRTATNPQKNNAY NILAKGNIGNERHRFETLYEQYYHANDTVLANGLGSQSRGPVTITTSESNARDRIRRQRI EAGYRYTGEGRLKEANLTAYQQKLRTEDDAVDVSITRMGTRQLGNSTRYSDYGFNQTIRG LNGRSVWEFDGAVKQTVVAGAEYKHTETARPRDSLTVDNLNGAVSKVYAGSTYPNKTFPD SKRKTFSVYAQDSLTFGNGIVLTPALRYEKDKLNTSTDQAYLNANPSGTATRFSDSAFTP SLRLSVPMGEQFTGFATYSQGFRTPPFDSATMAFANTTYGYAVIPNANLKSECSNSFELG MKFKNERARAQVTAFYNRYRNFINRTEIGTSTIGGRPIIQYQYQNLDRVKTYGAEASAAY KFLPGWQVSGNIAWMRGEQQDGKPLDSAYPLNGVLGLDYTQEKWGVGTKLRWSKKHSRVS SDTVFQEPGYGVWDVGAWYKPFKNLEIGANIYNVGNKKYWQHADVAGMSRTSVMDLYTET GRNFAATVQLKF >gi|241318952|gb|ACQV01000029.1| GENE 19 16079 - 16870 1044 263 aa, chain + ## HITS:1 COG:PM1078 KEGG:ns NR:ns ## COG: PM1078 COG4558 # Protein_GI_number: 15602943 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Pasteurella multocida # 15 263 16 264 264 308 60.0 6e-84 MKLKLLLLSAFISLTGTAHAQRIVVLTPDTADIVAALGALDEIVGRDQTVQNPALKNKPS IGIHRRLTVEPIVAAKPDIAIGSWMAQPADIFAHLQKAGIKAVNVAPDDSIAAYPQSIRN IGQLIGKSAQADKLASKWQADMKQQPSSGKRYLFSYDGRIVSGKNTAADEIIRRAGGINA AAAIDGLKPMTREAWIAAKPDIIIIADHNTAMIGNVKTFAARPEIAGSPAAKNGKIYLWK ANDMFRYGLDTPQVIQRLHGLAK >gi|241318952|gb|ACQV01000029.1| GENE 20 17013 - 17954 690 313 aa, chain + ## HITS:1 COG:PM1079 KEGG:ns NR:ns ## COG: PM1079 COG0609 # Protein_GI_number: 15602944 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 1 313 1 313 314 297 64.0 2e-80 MKPHILTLCLLLTAAAVYLCCGIGFGAWESPLAMDETVRQIRLPRIYTALLVGAGLSASG AALQALFENPLADPSLIGTSGGAALGVIVLLALGGGAMGVPAAAFLGALGVCLLILAVHK LLGGGTLGLLVLGFVLSAFSGAVVSMILFLSDDLVLRSATTWLSGSLAEAGFSSPVAAIA VMLPGFLILLSAGRRLDVLMTGEDTAASMGVSVAALRVQTVIGAALMTGAAVSLSGIIGF LGMMVPNVLAQTVGGSRRKLIALSAWLGAVFLMVVDGAARWLTYPVDLPVGIVIALLGGP FFMYLFIKPLKSR >gi|241318952|gb|ACQV01000029.1| GENE 21 18001 - 18726 180 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 214 1 226 245 73 28 3e-12 MHTLFQICNLSVRVQDKTLLEIDQLDIPSGMTVIIGPNGAGKSTLLRALIGQTGQGGITL FGEAVAPQIRAGRVAWVGQHGRYNMPMTVREYIALASFVQKGRLNHEWADELLDYFDLTA LADKRIGKLSGGEQQRANIIRALLQNAPVLLLDEPCNHLDIRHQHRLMQYLVGYSNRASS MMVLHDLNLAARYAEHIILMDKGKVVASGKVGEVMRPDLLESVYGWQIRRCEDEAGFYFR S >gi|241318952|gb|ACQV01000029.1| GENE 22 19001 - 20821 1726 606 aa, chain + ## HITS:1 COG:YPO0286 KEGG:ns NR:ns ## COG: YPO0286 COG0635 # Protein_GI_number: 16120625 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 11 428 11 429 437 332 42.0 1e-90 MVQQLVWTPKQSAPKAFPERQALMPVWGGVPMPRPQWQNIWKKKLPHATDVDALAYLHIP FCANHCVFCGFYRNAWKDSQSSVYTDKIIEEMAAEAEVRTDKGKIRAVYFGGGTPTALLT EDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAQACIEAGANRISIGVQTFNTAIRR RLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDDVWQNDIARAAELPLSGLDTYA FNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWEQVSNSHFAYPGRGERN RYNTLIKSDIPCLAFGSGAGGNFGGFSYQVQGDLESYLATPKGEKNIAFMSGHSPNKALL SKVQHDIETGRLNPLLFDGNKAAQKLIAQWQEMQLFKEPDSDGLIRLNTSGRYWSPTLIR KLMLTLPTQEKDQTMQKLSAEQQTMLRQSLEKNPGQVLEMLAAQNQCSFEDVIRCLPEEN VRQTEGSRIVEILQAIAAWDESVTFIAHTPDAIVEVSGKLPNGKVGRGFYNFDHPETDGG VHGHIYYENCASIYLLERPFMGKATCSLNFINRNGGAMFKIFVGRDEAGELKQHQIEAMR KLFDAA >gi|241318952|gb|ACQV01000029.1| GENE 23 20914 - 21531 843 205 aa, chain + ## HITS:1 COG:ECs4385 KEGG:ns NR:ns ## COG: ECs4385 COG0702 # Protein_GI_number: 15833639 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 3 202 5 199 207 84 32.0 1e-16 MQLIFGANGPSGRAYIRTLTDSADTVAVLRRPSEDSFFAAHNIQTVVADALDADALDKAL AQYRPDTVISFVGGKNEEGIRSDALGNINIIAATKAANPQARFVLITSMGCGEQWDMMSE PFKQALGEAVRAKTEAEIYLKQSDLNWTILRPCGLADGEDNAYTLTQNAQEIPQKYMTRN GLAAAVAAIVGQADSKGETYSVGAA >gi|241318952|gb|ACQV01000029.1| GENE 24 21814 - 22188 193 124 aa, chain - ## HITS:1 COG:NMA1394 KEGG:ns NR:ns ## COG: NMA1394 COG3737 # Protein_GI_number: 15794307 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 124 9 131 131 93 38.0 1e-19 MKITENHIDETASFFSSSQGILQIGEQTYSEPICWQDGKISIIPQATIEELNEQIFISAI ETAENRPEVIIIGTGAKQQFLHPKITVALSAYGIGFECMNTASACRTLVLLQGEERSTWA WLWP >gi|241318952|gb|ACQV01000029.1| GENE 25 22395 - 23702 1968 435 aa, chain + ## HITS:1 COG:NMA1395 KEGG:ns NR:ns ## COG: NMA1395 COG0460 # Protein_GI_number: 15794308 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 434 1 434 435 729 91.0 0 MKPVNIGLLGLGTVGGGTATVLQDNAAEISRRLGREVRISAVCDLSEEKAKQICPNAAFI KDPFELVQHQDVDVVVELFGGTGIAKDAVLKAIENGKHIVTANKKLLAEYGNEIFPLAEE KNVMVQFEAAVAGGIPIIKALREGLAANQIRSIAGIINGTSNFILTEMREKGSAFADVLK EAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMNFSACYLEGISKLDSRDIKYAEE LGYRIKLLGITRKTDKGIELRVHPTLIPESRLLANVNGVMNAVRVNADMVGETLYYGAGA GALPTASAVVADIIDIARLIEAETDHRVPHLAFQPSQVQAQNILPMDEITSSYYLRVQAT DEPGTLGQIAALLAKENVSIEALIQKGVINQSTAEIVILTHTTVEHNIKRAIAAIEALSC VDAPITMIRMESLHG >gi|241318952|gb|ACQV01000029.1| GENE 26 23695 - 24129 499 144 aa, chain + ## HITS:1 COG:no KEGG:NMC1129 NR:ns ## KEGG: NMC1129 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 144 1 144 144 169 73.0 2e-41 MAEQQTERPSEEQLAARKKAKAKIRTILIWAWIILSLLALTALLSQCAMNKPQMKQNVVE SCVKNIPFAEKWQADLKAKGLDAQNEKLAQDYCACMWDQPLSKLSDEQIRNFGKISPEEQ LKLLGGAEAFEARDKQCVADLKAE >gi|241318952|gb|ACQV01000029.1| GENE 27 24263 - 24769 343 168 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3798 NR:ns ## KEGG: Sterm_3798 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 2 141 1 137 169 80 36.0 1e-14 MVIAMRYHFPIAVDIYNFLYTGRFDYLEIGQSAESILQMFPAPDCVPKGLLVQKGWNIWL YGDIELHFSDNRLTQIRADFQPDAALSGGRWVKLNPWFFANGCLDVYAVIQRLVQRNIDF IKTETHTNLILQLQSGVELIFEKCRGMQLASFRKQKASLPHWARETAS >gi|241318952|gb|ACQV01000029.1| GENE 28 24816 - 25532 569 238 aa, chain - ## HITS:1 COG:PA3004 KEGG:ns NR:ns ## COG: PA3004 COG0005 # Protein_GI_number: 15598200 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pseudomonas aeruginosa # 3 236 5 229 245 201 45.0 1e-51 MLAIIGGSGLTKLPELEITERKIVRTPYGLTSSPILFGRLGRLDIVFLARHGFSHTIAPH EINYRANIWALHSLGVENIIAISSVVGINPDFENGSLVLPDDLIDYTYGRKDTFFEGQEC PVVHTDFFNPYCDELRQELLNITKAHNVPIYDSAVYGCLQGPRRPTRAEIARYRRDGVDV LGMTGMPEAVLARELKMAYAHFCSVSSIDCFDSGVGTEGCNEQTSMTMTKIRQLLNGL >gi|241318952|gb|ACQV01000029.1| GENE 29 25598 - 26668 1264 356 aa, chain - ## HITS:1 COG:NMA1381 KEGG:ns NR:ns ## COG: NMA1381 COG0628 # Protein_GI_number: 15794302 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Neisseria meningitidis Z2491 # 1 356 1 356 356 448 75.0 1e-126 MYQKKTRGAKPWIIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWLQLKRIRR APASMIIMAFALLVLLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSVSGDYI QIDQESIIAWLQSHTDELSNTLKEWIPTLMRQSGNVISGVSNLALLPLLLYYFLLDWKRW SSGISKLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAI GMIAGILVFIPYLGAFTGLLLATIAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVG DRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVILREGASAYFGSRFYKHK >gi|241318952|gb|ACQV01000029.1| GENE 30 26874 - 27908 1029 344 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 [Marinobacter sp. ELB17] # 4 331 7 333 354 400 58 1e-110 MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFGALVEIGKKYKNPVLVS GTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVARATDV IKGIAQGCEESGCALIGGETAEMPGMYPEGEYDLAGFAVGVVEKERVINGRSIQAGDVVL GLASNGAHSNGYSLVRKIIERDNPDLDAEFDNGKTLREAIIAPTRLYVKPILAALEKFTI KGMAHITGGGITENVPRVLPENTVAQIDAKAWELPKLFQWLQKAGNVETQEMYRTFNCGI GMVVIIAKEDADAVQAFLSEQGETVYRLGAVRERNGDEHQTQVA >gi|241318952|gb|ACQV01000029.1| GENE 31 27983 - 29194 2041 403 aa, chain - ## HITS:1 COG:NMB0435 KEGG:ns NR:ns ## COG: NMB0435 COG0282 # Protein_GI_number: 15676347 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Neisseria meningitidis MC58 # 1 399 1 399 399 761 94.0 0 MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVITFNKDGNKRQVPLTGR NCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYHESVLIDQDVLDELKACIPLAPL HNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTYAVPRELRKKHAFRRYGFHGT SMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIRNGKSVDTSMGFTPIEGLVMGTRC GDIDPGVYSYLTAHAGMNIEQVDEMLNKKSGLLGISELSNDCRTLEIAADEGHEGARLAL EVMTYRLAKYIASMAVACGGVDALVFTGGIGENSRNIRAKTVSYLDFLSLHIDTKANMDK RYGNSGIISPTGSMPAVLVVPTNEELMIAHDTAQLAGFMEEAG >gi|241318952|gb|ACQV01000029.1| GENE 32 29502 - 30671 1613 389 aa, chain - ## HITS:1 COG:NMA2051 KEGG:ns NR:ns ## COG: NMA2051 COG2828 # Protein_GI_number: 15794929 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 389 1 389 389 704 95.0 0 MPQIKIPAVYYRGGTSKGIFFKRTDLPAAAQEAGEARDKILLRVLGSPDPYGKQIDGLGN ASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAIEQGLVDK AKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFELDGVTFPAAEVQIEFLDPAD GEGSMFPTGNLVDELDVPDIGRLKATLINAGIPTVFLNAADLGYTGKELQDDINNDAAAL EKFEKIRAYGALKMGLINDVSEAAARAHTPKVAFVAPAADYTASSGKTVNAADIDLLVRA LSMGKLHHAMMGTASVAIAAAAAVPGTLVNLAAGGGTRNEVRFGHPSGTLRVGAAAECSD GIWAVKKAVMSRSARVIMEGWVRVPDDCF >gi|241318952|gb|ACQV01000029.1| GENE 33 30789 - 33395 3568 868 aa, chain - ## HITS:1 COG:NMA2052 KEGG:ns NR:ns ## COG: NMA2052 COG1048 # Protein_GI_number: 15794930 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Neisseria meningitidis Z2491 # 1 868 1 868 868 1722 98.0 0 MTANQRYRKALPGTDLEYYDARQACEDIKPGSYDKLPYTSRILAENLVNRADKVDLPTLQ SWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDAIAEKGGDPSKVNPVVQTQ LIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWTKTAFENVDVIPAGNGIMHQI NLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVISVGVGGLEAETVMLGRASMMRLP DIVGVELTGKRQPGITATDIVLALTEFLRKERVVGAFVEFFGEGARSLSIGDRATISNMT PEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVETYAKTAGLWADALKTAVYPRVLKFDL SSVTRNMAGPSNPHARFATADLASKGLAKPYEEPSDGQMPDGAVIIAAITSCTNTSNPRN VVAAALLARNANRLGLQRKPWVKSSFAPGSKVAEIYLKEAGLLPEMEKLGFGIVAFACTT CNGMSGALDPKIQKEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYALAGS IRFDIENDVLGVADGKEIRLKDIWPTDEEIDAIVAEYVKPQQFRDVYIPMFDTGTAQKAP SPLYDWRPMSTYIRRPPYWEGALAGERTLRGMRPLAILPDNITTDHLSPSNAILASSAAG EYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVRNEDGSVRQGSLARVEPEG QVMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTN LIGMGVLPLQFKPGTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRL DTAEEVLVYEAGGVLQRFTQDFLEGNAA >gi|241318952|gb|ACQV01000029.1| GENE 34 33798 - 34952 1908 384 aa, chain - ## HITS:1 COG:NMA2054 KEGG:ns NR:ns ## COG: NMA2054 COG0372 # Protein_GI_number: 15794932 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Neisseria meningitidis Z2491 # 1 384 1 384 384 775 98.0 0 MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYDILDLAQKCEFEEVAHL LIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHPMDVMRTGVSMLGCVHPER ESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVESDEETIGGHFLHLLHGKRPSE SHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSCITGAIGALKGPKHGGANEVAYD IQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTISDPRNVVIKEVARGLSKETGDMRLF DIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVPTAMFTPLFVISRTTGWSAHVLEQRKD GKIIRPSANYTGPEDLAFVEIENR >gi|241318952|gb|ACQV01000029.1| GENE 35 35037 - 35912 1065 291 aa, chain - ## HITS:1 COG:NMB0430 KEGG:ns NR:ns ## COG: NMB0430 COG2513 # Protein_GI_number: 15676342 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 291 2 292 292 554 98.0 1e-158 MSQHSAGARFRQAVKESNPLAVVGCVNAYFARLATQSGFKAIYLSGGGVAACSCGIPDLG ITTMEDVLIDARRITDNVNTPLLVDIDVGWGGAFNIARTIRNFERAGVAAVHIEDQVAQK RCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDALAVEGLDAAIERAQACVEAG ADMIFPEAMTDLKMYRQFADAVKVPVLANITEFGSTPLYTQSELAENGVSLVLYPLSSFR AASKAALNVYEAIMRDGTQAAVVDTMQTRAELYEHLNYHAFEQKLDKLFQK >gi|241318952|gb|ACQV01000029.1| GENE 36 36237 - 36332 114 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLYQTTLSCYRFSPVSAAPVAASLLAVPTV >gi|241318952|gb|ACQV01000029.1| GENE 37 36679 - 37101 360 140 aa, chain - ## HITS:1 COG:no KEGG:NGO1505 NR:ns ## KEGG: NGO1505 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae # Pathway: not_defined # 1 140 1 140 140 157 63.0 1e-37 MSKNQKLLIAAVLLIVFAAAKLLLLDWWQRQQSKANVVECSLTQGCVLPDGSKVRATSIN THEPFDIVVENVPKNTGAVSISFSMKNMDMGFNRYNLTQQSPQSWQAAQVRLPFCVEGRH DYTVDITIGKQTFQTAFSAE >gi|241318952|gb|ACQV01000029.1| GENE 38 37103 - 37906 788 267 aa, chain - ## HITS:1 COG:NMB0453 KEGG:ns NR:ns ## COG: NMB0453 COG0494 # Protein_GI_number: 15676364 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 1 264 1 264 269 328 65.0 5e-90 MTEDTRPLVQVVAGILLDQNGRYLLSSRPEGKPYAGYWEFAGGKVEAGETNFQALQREFE EELGIRILAATPWLTKVHSYEHAHVRLHFLWVEADQWTGEIQSREGQKWAWQKAGDFTVA PMLPANSALLRSLSIPRQLQGRLKSGLSGQNSMGEYHVVPYLSAQHQTASAVLLDFADWQ QGKPIEAPSVWPIIENVEQWLQVQNADAVVWKVANEVAAKQVVDILAQGVAMPLIVAAPE SMVSIYREQWQSMGAHAVLTDNDIEAV >gi|241318952|gb|ACQV01000029.1| GENE 39 38060 - 38437 690 125 aa, chain - ## HITS:1 COG:NMB0452 KEGG:ns NR:ns ## COG: NMB0452 COG0736 # Protein_GI_number: 15676363 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Neisseria meningitidis MC58 # 1 125 1 125 125 200 88.0 6e-52 MIYGIGTDIVSLKRIIRLNKKFGLAFAQRILSPEELLEFPQAGKPVNYLAKRFAAKEAFA KAVGTGIRGVVSFRNIGVGHDALGKPELFFAPALTKWLEEQGIRSCHLSMSDEEDTVMAF VIAEK >gi|241318952|gb|ACQV01000029.1| GENE 40 38525 - 39253 1126 242 aa, chain - ## HITS:1 COG:NMA2037 KEGG:ns NR:ns ## COG: NMA2037 COG0854 # Protein_GI_number: 15794917 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Neisseria meningitidis Z2491 # 1 242 1 242 242 427 92.0 1e-120 MLLGVNIDHIATVRNARGTIYPSPVEAALIAETHGADLITMHLREDRRHIKDTDVFAVKN AIRTRLNLEMALTEEMLENALNVMPEDVCLVPEKRQEVTTEGGLDVLAQQDKVAEFTKIL TDAGIRVSLFIDADNAQIQAAHDVGAPVIELHTGAYADAHSHAEQMKQFERIQNGAHYAS DLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLISQALFLGLPEAVRQMKEVMFRARM LP >gi|241318952|gb|ACQV01000029.1| GENE 41 39322 - 40065 600 247 aa, chain - ## HITS:1 COG:NMA2038 KEGG:ns NR:ns ## COG: NMA2038 COG1381 # Protein_GI_number: 15794918 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Neisseria meningitidis Z2491 # 1 243 1 243 264 343 72.0 2e-94 MAQPNRINHEPIFLLASAPWRESSLWVEAFSRRYGRVALLARSARKRQSELRGVLVPFVP VSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLKLTVREDPLPELYDVLAE TMKTICCEANHIAALRRFEWTLLTRLGFAPDLFHDGNGNEINSDETYWLTPEEAVVHLAE ADRFHALNKGVAVLGATLIDLREGSFVHQESLGQALKVTRLLIDNLLPEGIKSRQVLQQL QQFGLGS >gi|241318952|gb|ACQV01000029.1| GENE 42 40218 - 41660 1588 480 aa, chain + ## HITS:1 COG:no KEGG:Asuc_2041 NR:ns ## KEGG: Asuc_2041 # Name: not_defined # Def: patatin # Organism: A.succinogenes # Pathway: not_defined # 8 449 4 448 451 460 51.0 1e-128 MFMPKFPFKSALSLFSAALLSACSLVKYQPIAGIDTVDLQRGYRFETSRLQHHDEDDTLI VLMFSGGGTRAAALGYGVLEQLHKQQVTIGGKKQSLMSNVDVVVGVSGGSVLAAYFALKG EETIPLFYKRFLHQNFQRQVVKQAFSMSNLPRLASPEYGRGDLLQEQFENYLFGKTTFRD LEKNAKGPFAIISATDMGIGERFNFTQEYFDPMCIDLGDLRLARAVAASSSVPMVFAPIT LNNNGGNCHYTPPIQLVADTEVGKKQMQTRKEFFERFQKYSDSKNRLYIHLIDGGLTDNL GMRSLLDMTEMYPEKILTHKIKQNKIRHIVVINVNAQNEVSSNLDKSAAVPGFRDVVSAI VNIPIDQHSQESLRRFRAFVDQWNKDKQNEDIYFSFVSLNLKDLPPSQLRDKVLNIPTSF YLPPEDVDNLRTAAAELMKQLLDYRNLLAEFAAHPNPDTIFAAPPPDAQEFKPLNEKKKQ >gi|241318952|gb|ACQV01000029.1| GENE 43 41773 - 42507 950 244 aa, chain + ## HITS:1 COG:NMB1039 KEGG:ns NR:ns ## COG: NMB1039 COG1636 # Protein_GI_number: 15676926 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 234 1 234 241 464 92.0 1e-131 MTKLNTPIVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAMLASGIDYTIYFYNPNIH PYKEYMLRKEENMRFADKFGIPFVDKDDDYENDRKEWFAKAKGMEFEPERGIRCTMCFDM RFEKAAQYAHENGFHVFTSSLGISRWKDMKQINGCGHRAAEPYDDLVYWDFNWRKGGGSA RMIEISKREHFYQQEYCGCAYSLRDSNAHRKSQGRIPIKLGVLYYGDESTQYEPQAENKI IVEK >gi|241318952|gb|ACQV01000029.1| GENE 44 42559 - 42891 441 110 aa, chain - ## HITS:1 COG:no KEGG:NMC1229 NR:ns ## KEGG: NMC1229 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 10 109 3 103 103 105 59.0 4e-22 MLMLKNLGSALAAVAVLSLGTYSAEAAAKPHGHHVSKHQQVKKYKLHPACKRYLERRAAW YRYKGNKAELRENRKAAKAFRGLPYAEQKIQCQAAYQAFDDFDHGKFRRR >gi|241318952|gb|ACQV01000029.1| GENE 45 43283 - 45562 3620 759 aa, chain + ## HITS:1 COG:NMA1501 KEGG:ns NR:ns ## COG: NMA1501 COG0209 # Protein_GI_number: 15794401 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 759 1 759 759 1470 94.0 0 MNAATNIKVTKRDGRLEDINLDKIHRVVTWAAEGLQNVSVSQVELKSHIQFYNGIRTDDI HETIIKAAADLISQDTPDYQYLAARLAIFHLRKIAYGEFEPPHLYDHVKKLTEAGKYDRH IIADYSREEFDELNAYIDHSRDMTFSYAAVKQLEGKYLVQNRVTRQIYETPQFLYILVAM CLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVRTPTRQFSSCVLIECDDSLDSIN ATTSAIVKYVSQRAGIGINAGRIRGLGSEIRGGEAQHTGCIPFFKMFQAAVKSCSQGGVR GGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQLDYGVQINRLLYTRLIKGGNITLFSP NEVPSLYDAFFADQDEFERLYTKYEQDPNIRKRTLSATDLFSTLMQERAGTGRIYIQNVD HCNTHSPFDPRVAPVHQSNLCMEIALPTKPLDNINDPNGEIALCTLSAFNLGALNSLDEL EGLADLTVRALDALLDYQDYPVEAARTATMNRRTLGIGVINYAYYLAKNGVRYSDDSALG LTHRTFEAMQYYLLKASVNLAKEYGACPLFNQTVYSQGKLPIDTYKKDLDAVCSEPLLCD WESLRADIVKYGLRNSTLTALMPSETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPE FETLKDVYETLWQLPGNEGYLKLVGVMQKFVDQAISANTAYDPGKFEGNKVSMKQMLKDL LTAYKYGVKTLYYHNTRDGADDTQTDIQDDGCSGGACKI >gi|241318952|gb|ACQV01000029.1| GENE 46 45617 - 45844 122 75 aa, chain + ## HITS:1 COG:no KEGG:Cphamn1_2547 NR:ns ## KEGG: Cphamn1_2547 # Name: not_defined # Def: hypothetical protein # Organism: C.phaeobacteroides_BS1 # Pathway: not_defined # 2 75 4 77 77 95 79.0 4e-19 MGKNQHVVPHKDGWAVKGAGNQKATRVVSTQREAINIAQDIARNQHSDTKIHGENGRIRA GNSYGNDPCPPKDKK >gi|241318952|gb|ACQV01000029.1| GENE 47 45886 - 47040 1699 384 aa, chain + ## HITS:1 COG:NMB1288 KEGG:ns NR:ns ## COG: NMB1288 COG0208 # Protein_GI_number: 15677155 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 384 1 384 384 744 94.0 0 MSCEHLVMSYSTFSKTKNDALKEPMFFGQPVNVARYDQQKYEVFEKLIEKQLSFFWRPEE IDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWS FSETIHSRSYTHIIRNIVNDPSVVFDDIVQNKYIIARAEDIACYYDDLIEYTQYYNLLGE GSHNIGGKLVTVSLRELKKKLYLCLMCVNVLEAIRFYVSFACSFAFAERELMEGNAKIIK LIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQEKEWAAYLFK DGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLSSDNVQVAPQEV EISSYLIGQIDSEVSADDLGDFEL >gi|241318952|gb|ACQV01000029.1| GENE 48 47116 - 47493 358 125 aa, chain + ## HITS:1 COG:no KEGG:Clim_0564 NR:ns ## KEGG: Clim_0564 # Name: not_defined # Def: hypothetical protein # Organism: C.limicola # Pathway: not_defined # 24 125 2 104 109 82 42.0 6e-15 MKIYGDIAVKAAESYSKYEDMEQAWTEIAALFPIKESIRKKGCPKNAFLGLCRAGLVKGI NPEKVKTKHSKNGEYAVAAVSLLKNDPEWANQKKSVFWREIVGNEKKYNSQLHVVLALWE KGLII >gi|241318952|gb|ACQV01000029.1| GENE 49 47555 - 47854 131 99 aa, chain + ## HITS:1 COG:HI1309 KEGG:ns NR:ns ## COG: HI1309 COG0633 # Protein_GI_number: 16273221 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Haemophilus influenzae # 7 80 8 81 82 88 56.0 3e-18 MALISTHDKTFQLQQGETLLEGLERTGHEVEYQCRSGYCGSCRVKILDGKVSYDNFPLAF VAPGEILPCCCRVTEDIKLDCRERIKEPDLFDVDLFEDK >gi|241318952|gb|ACQV01000029.1| GENE 50 47931 - 48500 650 189 aa, chain - ## HITS:1 COG:PM1452 KEGG:ns NR:ns ## COG: PM1452 COG1584 # Protein_GI_number: 15603317 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 1 189 1 188 188 232 71.0 3e-61 MTTTKENLANPGPVGLCGFALTTWLLSLINGGFFTAQEGVGLVLGMALAFGGIAQVIAGM FEFKKGNTFGFTAFISYGAFWWTWALFTIFFKGETAPAFIGWYLCAWGMFSLMMFVATLT KPKVLSGIFFFLTLTFFALGIGDGMENHSIVHIGGCLGLVTALGAFYLAAAEVINESFGK TVLPVGERK >gi|241318952|gb|ACQV01000029.1| GENE 51 48635 - 49384 622 249 aa, chain - ## HITS:1 COG:NMB1446 KEGG:ns NR:ns ## COG: NMB1446 COG0710 # Protein_GI_number: 15677303 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Neisseria meningitidis MC58 # 4 248 5 249 254 266 55.0 3e-71 MKPVIIKNIEIGKGLPKIAVPLVAANTQELDQALRVLKDTAFDIIEFRADFFQAALNADF IAEQLGIVRQAFPDKPLLFTFRRAQEGGNTPCSDDYYFDLLEKIIRSKQADIIDIELFAE ESGVKQTIALAHEYQTAALLCNHDFQATPSLADITGRLKTMAEWGADICKIAVMPQSPQD VLTLLQATYNVSQIIDRPIITMSMGKIGAVSRLAGSTFGSAVTFGAAQKTSAPGQINANE LRKILAILG >gi|241318952|gb|ACQV01000029.1| GENE 52 49412 - 51253 2111 613 aa, chain - ## HITS:1 COG:NMA1540 KEGG:ns NR:ns ## COG: NMA1540 COG0322 # Protein_GI_number: 15794433 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Neisseria meningitidis Z2491 # 3 613 18 628 628 1228 96.0 0 MSATEPFDLPLFLKNLPNLPGVYRFFDKDNNVLYVGKAVNLKRRVSSYFQKNDHSPRIAL MVKQVHHIETTITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYY RGTLKKPNQYFGPYPNSNAVRDSIQVLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPC VGHISEEDYRDSVREAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIM QSNQFIDSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQ DYAEAFVAQHYLGKSKPDIIISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAE QNAQMAIAQRRLQQSSQQHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDE QNIQPSQYRRYNITTAKPGDDYAAMREVLTRRYGKMQEAEANGESVKWPDVVLIDGGKGQ IGVAVSVWEELGLHIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDE SHRFAITGHRKKRDKARVTSSLSEIPGIGSKRRQALLTRFGGLRGVIAASREDLEKVEGI SKALAETIYEHLH >gi|241318952|gb|ACQV01000029.1| GENE 53 51318 - 54089 4177 923 aa, chain - ## HITS:1 COG:NMB1384 KEGG:ns NR:ns ## COG: NMB1384 COG0188 # Protein_GI_number: 15677247 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis MC58 # 1 916 1 913 916 1617 91.0 0 MTDATIRNDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAM HELKNNWNSAYKKSARIVGDVIGKYHPHGDIAVYDTIVRMAQDFSMRYVLIDGQGNFGSV DGLAAAAMRYTEIRMEKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPALLVNGSS GIAVGMATNIPPHNLGDTINACLRLLDEPETEIDELINIIQAPDFPTGATIYGLSGVREG YKTGRGRVVMRGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGELVREKTLEGVSD LRDESDKSGMRVVIELKRNENAEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQIL SEFLRHRREVVTRRTLFRLKKARHEGHIAEGKAVALSNIDEIIRLIKESANAPEAKEKLL SRPWRSSLVEDMLSRTDLDLHMMRPEGLPENLGLHSQGYYLSELQADAILRMSLRNLTGL DQEEIVGEYKNLMSKIIDFVDILSKPERVTQIIREELADIKANFGDERRSEINPFGGDIA DEDLIPQREMVVTLTHGGYIKIQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDY LMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFA TAQGMVKKVQLSAFKNVRSQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEY WEKSGNDEAEDADIETENEDSDGLDDENAENALPSGKHGVRPSGRGSGGLRGMRLPADGK IVSLITFAPEAEQSDLQVLTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAA TLVSETDDLMLITSGGVLIRTKVEQIRETGRAAAGVRLINLDEGETLVSLERVAEEAEDE AALENDAAENQAVEAEDTPSQES >gi|241318952|gb|ACQV01000029.1| GENE 54 54217 - 54699 589 160 aa, chain - ## HITS:1 COG:NMB1482 KEGG:ns NR:ns ## COG: NMB1482 COG1607 # Protein_GI_number: 15677335 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 1 159 1 160 160 280 84.0 1e-75 MKPERQLPSHELIMSELMMPYTANFSGNVHGGDLLRLLDQVAYSCACRYSGTYCVTLSVD KVLFKEPIHVGELVTFYASINYTGRTSMEVGIRVEAQNIHTGEVRHTNSCYFTMVAVEDG KPVPVPPLEINTQRQRCRYERAKKRKELSLQAANEDSGCN >gi|241318952|gb|ACQV01000029.1| GENE 55 54814 - 55884 1190 356 aa, chain - ## HITS:1 COG:MA1721 KEGG:ns NR:ns ## COG: MA1721 COG0598 # Protein_GI_number: 20090573 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Methanosarcina acetivorans str.C2A # 57 356 57 356 356 239 39.0 7e-63 MSKPANPVETIDTLQDQAMQRSNTDNAPRSAIHQTLYSADTFVQHDYLAGKNLPVIVRPQ EGQINWLHFVGINDVALLKHALEPYGIHELVIEDILSRKQRPKIEDYGSYVFTAAQVYHY TSTGKLYSDQVYVIIGKDFVLSFQQKPLGLFSHLRRQMHENPHNILNKNTAFLAYCLLDR IVDDYFIVLESYNNRVEVIDKSLFKNENSDILSKIHRLKRDAVRLRRTLLPLRDVFYQLA VRGDFAIFKGESTVYLRDVYDHNMQLIESLDASRDMVLSMMDIYLSFQSNRMNQQMRVLT VITIIFMPLTVITGIYGMNFDNMPELHWHYGYFMVLGVMLCIIIGLLIFFSRRKWL >gi|241318952|gb|ACQV01000029.1| GENE 56 55986 - 57344 1831 452 aa, chain - ## HITS:1 COG:no KEGG:NMA1449 NR:ns ## KEGG: NMA1449 # Name: not_defined # Def: putative glutamate--cysteine ligase (EC:6.3.2.2) # Organism: N.meningitidis_A # Pathway: Glutathione metabolism [PATH:nma00480]; Metabolic pathways [PATH:nma01100] # 1 449 1 449 449 867 94.0 0 MKLPVMAAEYLSQLQAFEAKILCNHAKIEAWFRSQWNEHRPPFYGSVDIRNAGYKISSID MNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPENHTRNTFYLQNVYALSEI LRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTRERVHLADGFSPCVVLLNNDL SAGVPDILKDISQTVLPPLHGGWTTRRKTEHFGAYNQVAADFAKLIDIDEWQINPYFEKI SGLDFQEREGEDALAGAVERVLAKIQAKYDELGITDQPFVIVKADAGTYGMGVMSVKSAD EVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTYETMNGAVCEPVVYMMDRFVIGGFFRV HEGRGADENLNAGGMVFVPLSNSIPTGSGDNSQEAPEACKRVFEQWDSLGMPRSEKDCDV DNEHNRLYVYGVMARLSLLAAALELEKTAPQA >gi|241318952|gb|ACQV01000029.1| GENE 57 57610 - 59019 2288 469 aa, chain + ## HITS:1 COG:NMA1450 KEGG:ns NR:ns ## COG: NMA1450 COG0065 # Protein_GI_number: 15794355 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Neisseria meningitidis Z2491 # 1 469 1 469 469 900 96.0 0 MSAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEGLKMAGRKLWRIDSVVS TADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPFMDKGQGIVHVMGPEQGAT LPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCITAKKSKSMLIAVEGRLKPGV TAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMEGRMTLCNMAIEAGARSGMVAVDQT TIDYVKGKPFAPKGEAWDKAVEYWRTLVSDEGAVFDKEYHFKAEDIEPQVTWGTSPEMVL DISGKVPNPAEETDPVKRSGMERALEYMGLEAGTPLSEIPVDIVFIGSCTNSRIEDLREA AAIAKGRKKADNVQRVLIVPGSGLVKEQAEKEGLHKVFIEAGFEWREPGCSMCLAMNADR LTPGQRCASTSNRNFEGRQGNGGRTHLVSPAMAAAAAVTGHFTDIRTMA >gi|241318952|gb|ACQV01000029.1| GENE 58 59145 - 59399 520 84 aa, chain + ## HITS:1 COG:no KEGG:NMC1178 NR:ns ## KEGG: NMC1178 # Name: not_defined # Def: putative lipoprotein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 84 18 101 101 71 63.0 8e-12 MKKLFALAAAALILSACSSTWSGAKDDTSRNWDKTKETAERVADKTKETAEHVAEKTGEA VKKGGNAVGRGMSHVGEKIEAATE >gi|241318952|gb|ACQV01000029.1| GENE 59 59503 - 59868 428 121 aa, chain + ## HITS:1 COG:PM0279 KEGG:ns NR:ns ## COG: PM0279 COG3324 # Protein_GI_number: 15602144 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Pasteurella multocida # 1 121 1 126 126 115 50.0 3e-26 MSNPSSWFGIHAHDLDRAKAFYESVFDKPLQDVGGNGFRFIIFPADYTQHGTAGMIWHDS NAQPGHGGTTIFFNCPDCAETAEKAVAAGGKLLQEKFRIANGFAAFIEDTEGNRIGLHST R >gi|241318952|gb|ACQV01000029.1| GENE 60 59914 - 60555 975 213 aa, chain + ## HITS:1 COG:NMA1452 KEGG:ns NR:ns ## COG: NMA1452 COG0066 # Protein_GI_number: 15794357 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Neisseria meningitidis Z2491 # 1 213 1 213 213 441 98.0 1e-124 MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFDEWRYLDHGEPGMDNSK RPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDYGFRAVIAPSFADIFFNNC YKNGLLPIVLTEEQVDQLFKEVEANEGYQLSINLAEQTLTTPSGETFTFDITEHRKHCLL NGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG >gi|241318952|gb|ACQV01000029.1| GENE 61 60620 - 61081 479 153 aa, chain + ## HITS:1 COG:CAC0836 KEGG:ns NR:ns ## COG: CAC0836 COG2731 # Protein_GI_number: 15894123 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Clostridium acetobutylicum # 1 148 1 151 152 86 33.0 1e-17 MITDTISNASRYAALHPDFAEAFHLLQTLDFAKLPDSQVPCENPNIRIFIGSEPMRTQGE AQPEAHLKHIDIQTPIDGSETYGWIDRGRLKNGLGYNEKRDIEFFDCDPETWLTLEPGEF ALFYPNDAHAPLVGDRPNIRKVVFKIRVETERL >gi|241318952|gb|ACQV01000029.1| GENE 62 61120 - 61983 859 287 aa, chain + ## HITS:1 COG:no KEGG:Sde_3848 NR:ns ## KEGG: Sde_3848 # Name: not_defined # Def: pectate lyase/Amb allergen # Organism: S.degradans # Pathway: not_defined # 8 284 18 290 290 83 26.0 7e-15 MSFFNRLFRSKPKLMTWQEFVEYFARRIQEELHLEAKIDWGENIASSPIIVHFSEDDEAS FSTYLSNHYTSYLQNPEALEAIVAANLAVIYKIQDTDASVSAQQILPTIKNTIYLENARL ITNTDEAEPADYLVYKPIAGDIMLLYMVDTEESMHTLNREHMEETGIEDEDALYRTAMDN LRQRMNGRVQIHHAEGWSLAQIHLDNDYDASLILLLDEVLRDDPMLPANPVFAVPARNAL LVCSPSDEEALQAMANIALQAFEESAYAISTQLYQYHNGTISVFRAN >gi|241318952|gb|ACQV01000029.1| GENE 63 62050 - 63120 1649 356 aa, chain + ## HITS:1 COG:NMB1031 KEGG:ns NR:ns ## COG: NMB1031 COG0473 # Protein_GI_number: 15676918 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 356 1 356 356 687 97.0 0 MTKHIAILRGDGIGPEIVAETVRVLDKLIEQGLDVSYEYAPLGGEAYDEYGHPYPEFTQN LCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFANLRPAILYKELANASTLK PEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNTMKYSESEIRRIAHVAFQSAQ KRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVGLSHMYVDNAAMQLVRAPKQFDVIA TGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLYEPSHGSAPDIAGQNKANPLATILS LAMLLRYSLNDEARAQQVENAVQKVLQQGLRTGDIYEEGTKLVSCSEMGDAVLAAL >gi|241318952|gb|ACQV01000029.1| GENE 64 63248 - 64642 2223 464 aa, chain - ## HITS:1 COG:NMB1368 KEGG:ns NR:ns ## COG: NMB1368 COG0513 # Protein_GI_number: 15677233 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Neisseria meningitidis MC58 # 1 463 1 457 462 827 94.0 0 MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALDGRDIMASAQTGSGKTAAFLLP TLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNMRWFRTVSIVGGASFGYQT RALSKPVDLIVATPGRLMDLMQSGKVDFDRLEVLILDEADRMLDMGFIDDIETIVEATPS DRQTLLFSATWDGAVGKLARKLTKDPETIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHI LRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFAEVNEYVKVHK IEKYIARKLPELTIEGMEPTRKRKSAGGKPKGKGGWGDRKSGGWRGDKKPAKEGFGGKAR GEGHKKDGFKKDGFKKADGFKKGGEGFKGKRKSNDGFGGKHKKG >gi|241318952|gb|ACQV01000029.1| GENE 65 64983 - 65378 416 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760528|ref|ZP_04758621.1| ## NR: gi|241760528|ref|ZP_04758621.1| putative glycosyltransferase [Neisseria flavescens SK114] # 1 131 1 131 131 250 100.0 2e-65 MKFFKTAVLLPAFAVALLLGACSGSESYRGEWKAVASDGSKAKITFAAKSFTVKDEKGKE TVYEYTQNQYKLESGRTSYGIDIKNASEARIVFPFKGKTDRATMVAPDDTILYMLDRHAY VPADQFWKLPQ >gi|241318952|gb|ACQV01000029.1| GENE 66 65393 - 66364 1353 323 aa, chain + ## HITS:1 COG:NMB1367 KEGG:ns NR:ns ## COG: NMB1367 COG1092 # Protein_GI_number: 15677232 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 314 40 353 354 592 91.0 1e-169 MTDITPFANRLGKNIKHLMKWAKRNNIEAWRIYDRDIPQFPFAIDVYGDQIHLQEYDTGW LMQPEEYEAWLSDVLEAIGFVTGFAPEQIHLKRRERQKGLQQYEKTGKTGDDFVITENGR KFWVNLDKYLDTGLFLDHRNTRKKVGETATGKRFLNLFSYTGSFTVYAATGGAVSSETVD LSNTYLEWAKRNFELNSIDTEQHKIVRADVFQYLQNAADEGKKFDLIVMDPPSFSNSKKM LDILDIQRDHKKLIDGAMSLLASDGILYFSNNLRSFVLDDAVAEQYAVKDISKQSVPDDF RNKKIHQCWEIKHKVAFLIQFMK >gi|241318952|gb|ACQV01000029.1| GENE 67 66486 - 66827 178 113 aa, chain + ## HITS:1 COG:no KEGG:NMB1350 NR:ns ## KEGG: NMB1350 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 113 1 113 113 182 96.0 3e-45 MKNNVKNWTTKEVKQSLDEFNDVLIKNTFLLQYLKKEFSASSAYCLSMLPEEEDIYEILV NGNIIVDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFTLAKEIGKQKNI >gi|241318952|gb|ACQV01000029.1| GENE 68 66998 - 68179 1881 393 aa, chain + ## HITS:1 COG:NMB1371 KEGG:ns NR:ns ## COG: NMB1371 COG4992 # Protein_GI_number: 15677236 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Neisseria meningitidis MC58 # 1 393 1 393 398 673 82.0 0 MQNYLTPNFSFAPMIPERAFGSRVWDTEGREYIDLSGGIAVNALGHCHPDLVAALAEQSQ KLWHISNIYTTQPAQELAKKLVENTFADKVFFCNSGAEANEAALKLARKYGRDHFGEHKT EIISCLNSFHGRTLFTVSVGGQPKYSKDYAPLPAGITHVPFNDVAALEATISDKTCAVII EPIQGESGILPATQEYLQAARRLCDKHGALLILDEVQTGMGHTGKLFAYEHYGVTPDILS SAKALGGGFPIGAILTTEKIAPTFGPGTHGSTFGGNPMACAVGSRAFDIINAPETLAHVK QQGQKLQTALRELGEKTGIFKEVRGMGLLLGCVLADKYAGKASEITAAALKHGLMVLVAG ANVVRFAPSLLLNDEDMAEGLKRFEAALAEWLA >gi|241318952|gb|ACQV01000029.1| GENE 69 68404 - 69339 800 311 aa, chain + ## HITS:1 COG:SP0764 KEGG:ns NR:ns ## COG: SP0764 COG0167 # Protein_GI_number: 15900658 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 309 1 309 311 512 79.0 1e-145 MVSLKTQIAGFSFDNCLMNAAGVSCMTVEELEAVRQSSAGTFITKTATLTPRQGNPEPRY RDVPLGSINSMGLPNQGIDYYLDYLLSLQETHPKSAFFLSLVGMSPDETHMLLKKVQNSG FNGITELNLSCPNVPGKPQVAYDFETTERILSEAFSYFDKPLGIKLPPYFDIVHFDQAAE VFNRHPLKFVNCVNSIGNGMYIEDESVVIRPKNGFGGIGGQYIKPTALANVHAFYQRLDP SIQVIGMGGVYSGRDAFEHILCGASMVQIGTALHQQGVDIFERVSLEFKAIMAQKGYEKL EDFKGKLKYFA >gi|241318952|gb|ACQV01000029.1| GENE 70 69431 - 71431 2706 666 aa, chain + ## HITS:1 COG:NMA1660 KEGG:ns NR:ns ## COG: NMA1660 COG0210 # Protein_GI_number: 15794554 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Neisseria meningitidis Z2491 # 1 665 2 666 671 1234 91.0 0 MKLNPQQQAAVKYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVGYLPHTVAAITFTNKAA TEMQERVSKMLPKSQTRGLTICTFHSLGMKILREEANQIGYKKNFSILDSTDSAKIIGEL LGGTGKEAIFKAQHQISLWKNDLKTPEEAVQTAANVWEQQTARVYASYQETLQSYQAVDF DDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVGDD DQSIYAWRGANMENLRKMQEDYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKLW SQFGEGEIVKVVACQNEQHEADWVVSQIVKQKLVGSDKTQYADFAVLYRGNHQARIFEEA LRSARVPYQLSGGQSFFDKAEIKDVLSYLRLLANPNDDPAFLRAVTTPRRGIGDVTLGKL NTYAHEHECSLYEAAQTEEALALLNNTNRQHLQAFMDMFGSYRAKAETSEAGELINSLLK EIDYENHLLASEEGKAGEIKWRNVSDLTGWLERKGEQDGKNIIELAQTVALMTLLEGKSE EEVDAVKLSTLHASKGLEYPYVFLVGCEEGILPHNDSIEEDNVEEERRLMYVGITRAKRQ LTLTHCLKRKKQGTWQFPEPSRFIDEMPQEDIKILGRKGGEPIVSKEEGKSNLAGLLDML GNKRKG >gi|241318952|gb|ACQV01000029.1| GENE 71 71738 - 75634 5132 1298 aa, chain + ## HITS:1 COG:NMA0445_1 KEGG:ns NR:ns ## COG: NMA0445_1 COG0046 # Protein_GI_number: 15793449 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Neisseria meningitidis Z2491 # 1 971 1 992 1001 1828 91.0 0 MSVVLPLRGVTALSDFRVEKLFQKAAALGLPEVKLSSEFWYFVGSEKALDAATVEKLQAL LAAQSVEQTPEAREGLHLFLVTPRLGTISPWASKATNIAENCGLEGIERIERGMAVWLEG RLNDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLESETFSTVDVLGGGKEALVKANSE MGLALSADEIDYLVENYQSLQRNPSDVELMMFAQANSEHCRHKIFNADFILNGEKQPKSL FGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYPNAAENQGYRFHEEDTHIIMKVETH NHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKAGLTGFTVSNLNIPDLKQPWEQDYGKP EHISSPLDIMIEGPIGGAAFNNEFGRPNLLGYFRTFEEKFDGQVRGYHKPIMIAGGLGSI QAQQTHKDEIPEGALLIQLGGPGMLIGLGGGAASSMNTGTNDASLDFNSVQRGNPEIERR AQEVIDRCWQLGDQNPIISIHDVGAGGLSNAFPELVNDAGRGAVFKLREVPLEEHGLNPL QIWCNESQERYVLSILEKDLDTFRAICERERCPFAVVGTATDDGHLKVRDDLFSNNPVDL PLNVLLGKPPKTTRSDKTVRSSEKPFNAGDIDITEAAYRVLRLPTVASKNFLITIGDRSV GGMTHRDQMVGKYQTPVADCAVTMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAI TNIAAVNIGDIGNIKLSANWMAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSM KTVWQDGEEKKSVVSPLSLIISAFAPVQDVRKTVTPELKNVEDSVLLFIDLGFGKARMGG SAFGQVYNNMSGDAPDLDDTGRLKDFYGVIQQLVAKDKLLAYHDRSDGGLFATLVEMAFA GRCGLNVDLTSLVANQADVNEASIRALFNEELGVVIQIAKQDIAAVEALFKAAALPLHTV ATIGSDEKIVIRNQAGIVLEQTRADLQRAWQETSHAIQKLRDNPACADSEFALIGDNDRS ALFADVKFDVNEDIAAPFVNSGAKPKIAILREQGVNGQIEMAAAFTRAGFDAYDVHMSDL MAGRVHLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPTLRDQFAAFFADPNTLTLGVC NGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKSASLILNEMQGSSLPVVVS HGEGRADFALHGGNISDDLGIALQYVDGQNQVTQTYPLNPNGSPQGIAGVTNADGRITIM MPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKALG >gi|241318952|gb|ACQV01000029.1| GENE 72 75932 - 76750 430 272 aa, chain + ## HITS:1 COG:NMA1036 KEGG:ns NR:ns ## COG: NMA1036 COG3440 # Protein_GI_number: 15793992 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Neisseria meningitidis Z2491 # 152 269 241 365 372 92 44.0 6e-19 MSDIVIFEDMPNDAAFIEWLKNNQNGFVLNINKGKTEPIYPMLHKASSGCGSFPTEKKGK NWTTKGSDYFKVCSNSRKKLSEWSWSEYDRENRCKTCFKKELDEEKTAWLTEEQNFYTNS IPHLGKNIAELENRLASETSPEKQTELKSLIKVRRGQNQFRQDVFKLYPNCPLTGLDIEP LLIASHIKPWSVCNNKERLCRFNGLMLAPNIDALFDSGLITFETDGTIKISPKIDLENQK RLGISRDMKLKIEPESEKYFEYHRNHVFQKEE >gi|241318952|gb|ACQV01000029.1| GENE 73 76935 - 78020 835 361 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760572|ref|ZP_04758665.1| ## NR: gi|241760572|ref|ZP_04758665.1| hypothetical protein NEIFL0001_1141 [Neisseria flavescens SK114] # 1 361 1 361 361 753 100.0 0 MTRQAFILSDCEFPECGEKPYALLTANPTKEHHFIAQTEQRQHAHNPQVSPQNQNVYRLP LSMFHTGKKARGKEQNRSEAISVNIIGNLAAKNLYTLTFVEDSANQYNLESWFNRHESGY EEACNHLRTLPAGRLKTTTANADTVKVPDALWRILRLKFLGILRNPYNHKNLFAHRLHQT LRARLPEVGFEFVRLISKRDPKRIEAIMQDYRFTFLGYVDWLGGLYGMLSEGVAQPSLFE RLFCNIFAEPEAVKIELFRYPENTGLCLFGDSSFCLQASPKLFSVGVNISHDMFAIVHLQ TDRWHAFKNTFHHDAPKLQGQVRIIDGDQTQRLLFNRLCIHQAHEAVFGQSPNIKDYLEA V >gi|241318952|gb|ACQV01000029.1| GENE 74 78044 - 78793 1039 249 aa, chain + ## HITS:1 COG:NMB1997 KEGG:ns NR:ns ## COG: NMB1997 COG0491 # Protein_GI_number: 15677825 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Neisseria meningitidis MC58 # 1 249 1 249 252 425 80.0 1e-119 MKITPIKALNDNYIWMIQEGNHAACVDPSDATPVLKFLVHNRLMLAQTWITHPHPDHTGG AKSLFHGFLESPIYGESDIDVATHTVTAGTQFPFGEGLVTVWATPGHTDRHISYLLENSD GLHVFCGDTLFSAGCGRVFTGTIEQLYDSFHRFNQLPEETLFYPAHEYTASNLRFAQHIE PDNADIQTALTAAEHTPTLPVSLAHERKVNPFFRVHLPQVQARAEELSGRKLNSELEVFA ALRELKNQF >gi|241318952|gb|ACQV01000029.1| GENE 75 78864 - 80429 2426 521 aa, chain - ## HITS:1 COG:NMA0534_2 KEGG:ns NR:ns ## COG: NMA0534_2 COG0519 # Protein_GI_number: 15793529 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Neisseria meningitidis Z2491 # 198 521 1 324 324 662 99.0 0 MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLEEIKAFNPKGIILSGGPNSVY ESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVSPGNQREFGYAQVKTIDSELTRGIQ DDAPNTLDVWMSHGDKVSKLPTGFSVIGDTPSCPIAMMENAEKQFYGIQFHPEVTHTKQG RALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSDEVILGLSGGVDSSVAAALIHRA IGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVRVIHVDAEEQFLAKLAGVTDPEKKRKI IGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPENMKL KLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKKEYADLLRQADDI FIQELRNTTDENGTSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVVALRAVITSDFMTAH WAELPYSLLGRVSNRIINEVKGINRVVYDVSGKPPATIEWE >gi|241318952|gb|ACQV01000029.1| GENE 76 80578 - 80904 483 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284799942|ref|ZP_05985282.2| ## NR: gi|284799942|ref|ZP_05985282.2| putative transmembrane protein [Neisseria subflava NJ9703] # 1 108 19 126 126 172 99.0 7e-42 MSRPSLFLPLFLIIFGAIWFLRATDILPATSTMIAGALIILGLAVLIMDGINKQSIVSGP MLVYIGTAIYLHMSYWIYLSPLLAIGMVVLGCLLLLSRSDMIPEKHTK >gi|241318952|gb|ACQV01000029.1| GENE 77 81091 - 81543 724 150 aa, chain - ## HITS:1 COG:NMB0893 KEGG:ns NR:ns ## COG: NMB0893 COG0756 # Protein_GI_number: 15676789 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Neisseria meningitidis MC58 # 1 148 1 148 150 238 79.0 2e-63 MQTEVELKILNPKMADSLPAYATPGSAGLDLRACLDEAVVLQPGDVYLVPTGLAVHLANP AYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNRGKEAFTIEPMERIAQMVI VPVVQAAFKVVDEFATSERGEGGFGSTGKA >gi|241318952|gb|ACQV01000029.1| GENE 78 81655 - 82287 844 210 aa, chain + ## HITS:1 COG:NMA1572 KEGG:ns NR:ns ## COG: NMA1572 COG0259 # Protein_GI_number: 15794465 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Neisseria meningitidis Z2491 # 1 210 1 210 210 336 84.0 2e-92 MDLHNIREDYSKRELSEAECHADPIVQFEQWLNEAIHAEVNEPTAVNVAAVGEDGRPNSR MVLLKEVNPKGFVFFTNYHSRKGRSYTAHPFAAMTFFWPELERQVRVEGRIEKLDAAASD EYFESRPYTSRIGAWASAQSEVISSKAVLVAKAAAVGVKHPLHVPRPPHWGGYLVIPDRI EFWQGRPSRLHDRIQYRLVDGNWIRERLSP >gi|241318952|gb|ACQV01000029.1| GENE 79 82447 - 83505 1506 352 aa, chain + ## HITS:1 COG:NMB1361 KEGG:ns NR:ns ## COG: NMB1361 COG1187 # Protein_GI_number: 15677226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Neisseria meningitidis MC58 # 1 352 2 350 350 572 90.0 1e-163 MSKQPSSKRQWRDGVSSTAKKPSKPAKSFANKKRPDDERKTSGKPYGQKVSDGPKAQNTA PKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRFEPERLQKVLAASGVGSRREMEEW ISNGWVTVNGRVAQLGEKVTPDDHVTVKGSIIKLKWADRLPRIILYYKQEGEIVSRDDPQ GRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQRFAHPSFEVEREYAVRVLG ELTTEQMRVLTEEGVMLEDGLAKVERIYEQGGEGANKWYNVVIKEGRNREVRRIFESQGL TVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIKWADMLLPGERRRKKS >gi|241318952|gb|ACQV01000029.1| GENE 80 83895 - 84536 215 213 aa, chain - ## HITS:1 COG:no KEGG:PM0283 NR:ns ## KEGG: PM0283 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 1 213 95 310 310 228 51.0 1e-58 MVELYNYCLRNTRSGDVYDKILAFAKNPEIRCPFCGGISNPSQIDHFLPKSRYGHFSVFP YNLIPICKDCNTEFKKEFFPIEKNEQLIHPYLDEDCFFNEQWLYAEYIDDGTEFGTVSYY LVPPSGWSDDKKNKIKFHFEKFHLADRFSEFSSGNLSDILVQMKSHKMNGAFMEDFEKCS IDSVITKERKANHWKKALFQAVKAKLSVIWGRI >gi|241318952|gb|ACQV01000029.1| GENE 81 84764 - 86293 114 509 aa, chain - ## HITS:1 COG:no KEGG:PM0282 NR:ns ## KEGG: PM0282 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 1 506 1 510 517 635 63.0 1e-180 MNFLLLDRNERLPSNARNLVCLTYDNWNDYSYITMFFMNYIDEYGSVHPIGNIKIGFKGQ TPETSTCKKIIEICHGKTFESLPENFFSLAEDVEFYKSIMKLPKESREYILGNLNDVVYK PELFDRFKDEDVFKTSLMRSIRDGTIKEQFRRVLDDKPPLTNFKFSFIRTEKENMGNIQL DFNVIANSTPSTNIHAIIGRNGVGKTTLLNGMIKSFTHQIYEDGGFYTIDWSGQKYKINN DYFSYLVAVSFSIFDPFIPNHEDLKYYSYVGLKESDTQLKSSKEYFEKDFLLTFQECKSF TAKKERWLNAIQNLESDDNFAEMQLSRLIEDRLTQDEILKIIGRMSSGHASVLLIITQLV AKVQEKTLVLLDEPESHLHPPLLSAFVRALSDLLDNRNGVAIIATHSPVVLQEVPRSCVW KIERTGKVTNPYRPNIETFGENVGVLTREVFGLEVIKSGFHKLLTKEVSTGKSYEEILFN FNEQLGTEAKILLKTLVRIRDDRDGGNRQ >gi|241318952|gb|ACQV01000029.1| GENE 82 86940 - 87893 1429 317 aa, chain + ## HITS:1 COG:SA0232 KEGG:ns NR:ns ## COG: SA0232 COG0039 # Protein_GI_number: 15925944 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Staphylococcus aureus N315 # 5 315 6 316 317 367 55.0 1e-101 MKKVGNKVVVVGLGAVGVSYAYSMLNQALCDDMVLIDINRTRAEGEARDFRHGMPYAASP ARIYVGDYDDCSDADIVCICAGAALAPGETRLDLIDKNLRIFHDIVSKVMASGFDGIFLV ASNPVDVLSYAVLRFSGLPKERVIGSGTILDSARFRVCLGNEFDVAPWSVDAMMIGEHGD SIIALWSTANIAGMSVQKMLEQSEDGQARMDKIYNTVRNAAYEVIAAKGSTSHGIGMGLS RISNAILHNQGVVLPVSTLLEGEFGQNGVYIGVPTVVNRQGAVRIIDLQLSDDETERFAR SAELLKSYQHKVDEMVG >gi|241318952|gb|ACQV01000029.1| GENE 83 88241 - 88990 459 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 2 243 4 246 255 181 41 1e-44 MANQRLIYGFHAVNARLWQNPKSITELYIQEGKSDARTRDVLDKAASENVRVHFADADRL NAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPFLLVLDGITDPHNLGACLRTADAM GVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIVGTDMGGN SDLYHCDLPDSVAWVMGNEGEGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETR RQRVLKAEK >gi|241318952|gb|ACQV01000029.1| GENE 84 89053 - 89361 238 102 aa, chain - ## HITS:1 COG:BMEII0516 KEGG:ns NR:ns ## COG: BMEII0516 COG4541 # Protein_GI_number: 17988861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 11 101 8 98 99 95 67.0 3e-20 MKDLLSLQSFLLFLSMLAVTYSTRLIGFFALRNRTLSRRAQVVMEAAPGCVLISVIAPYF VSDKLHELIAIALTVLAASRFSMLVTVLIGVGTSGILGYLMK >gi|241318952|gb|ACQV01000029.1| GENE 85 89358 - 90068 670 236 aa, chain - ## HITS:1 COG:mll2427 KEGG:ns NR:ns ## COG: mll2427 COG1296 # Protein_GI_number: 13472209 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Mesorhizobium loti # 9 231 16 239 244 254 60.0 9e-68 MNHTASPRSEFLRGIKECSPMLIGLLPWALILGMQGGQKGMSWLEMLLMTGMNFAGGSEF AAVNLWANPLPILLIATVTFMINSRHILMGAAIAPYMRDMPLKKAMPALFFMCDESWAMA FAEIQKRKAAGLPAFNMPFYAGVCFILYVTWIGFAAFGAAVGPMFGDVAAWGFGMAFPAV FLVLLRGMWKSFAASRPWFVSLIVACVTYLTVDGAWYVPAGTLSGLLAAYLWGEQK >gi|241318952|gb|ACQV01000029.1| GENE 86 90171 - 91145 1839 324 aa, chain + ## HITS:1 COG:NMB0845 KEGG:ns NR:ns ## COG: NMB0845 COG1702 # Protein_GI_number: 15676741 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Neisseria meningitidis MC58 # 1 315 1 315 317 536 85.0 1e-152 MTHTVHLQFEEIDNTVLQRLCGALDSNLEALGKALDIRISRRFEHFTFMGELAHAGRRAL LSLAEAAEKGDLDDNAISLAAVEAKTADEKHEEKHHDQQYYFRTKRGSIGGRTPRQNGYI RALLNHDVVFGLGPAGTGKTYLAVAAAVDAMEKHQIERIVLVRPAVEAGEKLGFLPGDLA QKVDPYLRPLYDALYDLMGFDRVTKLMEKGLIEIAPLAYMRGRTLNGAYVILDEAQNTTP EQMKMFLTRIGFGAKAVITGDISQIDLPLNIKSGLKDAREKLRDVEGLYFHTFTSEDVVR HPLVQKIVEAYEAAEEQAEKKNGE >gi|241318952|gb|ACQV01000029.1| GENE 87 91267 - 92253 1376 328 aa, chain + ## HITS:1 COG:RSc1998 KEGG:ns NR:ns ## COG: RSc1998 COG0039 # Protein_GI_number: 17546717 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Ralstonia solanacearum # 4 328 3 328 329 426 66.0 1e-119 MTLKPPVRIAVTGAAGQIAYAALFRIAGGIMLGRDQPVILQLLDLPQAQQALRGVIMEMQ DCAFPLLADIFATDDPEVAFKDADIVLLIGARPRTQGMERADLLHANGEIFKVQGAALNK VANRNVKVLVVGNPANTNAYIAMKSAPDIPPENFTALMRLDHHRAVSQIAEKIDRPITSI EQMCVWGNHSPTMYADYRYATSNGESVQDMITEPDWNTEVFMPKIAGRGAAIIAARGSSS AASAANAAIYHLRDWLLGSSGKWITMGVPSDGSYGIPKGLIFGFPVICDEGSYRIVQGLD LSDEFSQKRIAATLAELEEERSAIQDLL >gi|241318952|gb|ACQV01000029.1| GENE 88 92304 - 93740 1262 478 aa, chain - ## HITS:1 COG:NMB1488 KEGG:ns NR:ns ## COG: NMB1488 COG1012 # Protein_GI_number: 15677341 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 477 1 477 477 842 92.0 0 MKTFSQLLNHPDISFSPISDGLKVGNPATGETLAFVRTTHSDDLKLLIQKAEAAQKLWAA KTALERADVLWRWYFLIKENKEELAHIMTMEQGKSLTEARGEMDYAASFVRWFAEEARRI DGDVLTSVKASQKLVVLKQPIGVTAAITPWNFPSAMIARKAAPALAVGCAMIVKPASLTP LSAYALALLAYEAGVPQDLLPVVSGRALEISHEFATNPTVRKISFTGSTEVGAKIFADSA ADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKFRNSGQTCVCTNRVYTQSGIYDEFC RKLSEKVAALKLGNGLEDGVNQGPLIEEKAVEKVEQHIADALAKGASCLTGGKRSALGGT FFEPTVLSGVTAQMAVAREETFGPLCPVFHFETEAEVVEAANNTEYGLAAYLFTSDTARQ WRVGEALEYGMVGINTGLISNEVAPFGGVKRSGLGREGSKYGADEYLELKYLCIDVAE >gi|241318952|gb|ACQV01000029.1| GENE 89 94070 - 95842 1258 590 aa, chain + ## HITS:1 COG:NMA1736 KEGG:ns NR:ns ## COG: NMA1736 COG0358 # Protein_GI_number: 15794629 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Neisseria meningitidis Z2491 # 1 590 1 590 590 1099 93.0 0 MIPSDFIDELLSKVDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFS CGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMTVPKVRGQEDNPEIRAERKKKQQTLEET TAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLAQVFQPYPNTALV DTGMVIDNEGKHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFDKGKN LYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSI YFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSHIRAYGKTQFEDALLN QSKPLSEYFWEHLSDGLNLNTQEGKAELVKTSSPLLAQITAPALGYLLKQKLSELVGIDP DNLAQLLGQEAPKRHVKQKSYKLPPISVKQPTMLTLVQRQIRSLLINPAWASYIDLPDYL ALSGDFACLANLAETIKHHDTTPATAQVLEYMRGSPYEETVNQIFLSTLHSEEMEGDNEE DCESFQIGMKKLLNELKYSQIETLKQKSIQTGLTENEKRLLLSLLTAKQN >gi|241318952|gb|ACQV01000029.1| GENE 90 95927 - 96013 56 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPTVYGDVAVPEGGAELFVVKSDFTLIL >gi|241318952|gb|ACQV01000029.1| GENE 91 96037 - 97989 2994 650 aa, chain + ## HITS:1 COG:NMB1538 KEGG:ns NR:ns ## COG: NMB1538 COG0568 # Protein_GI_number: 15677390 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Neisseria meningitidis MC58 # 1 649 1 641 642 978 88.0 0 MSKNQNYEEYQDQDDNRPLSIEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDAEQI DNIVSMISGLGIQVTEQAPDAEDILLSDNAAAMTDDDAVEEAEAALSSADSEFGRTTDPV RMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILALIEQVRNDEIRV DEVVEAIIDPNEVLLNELGLGHLENAKPDNEEGETDSDDEDGDDEDEDGSGSDSEAISAA HLAELKQKVLEHFAFIESEYGKMIKQLEKHGSQHANYLKHRDAIANKLLEVRFATRQIEN LSSNLRSRVENIRKLEREIRDICIDRVRMERDYFIKNFLPAITDLKWVEEEVAKGRVWAN ALDRFRHAILEKQTELANMEAETRISIEELKEINKNMVLSEKETSAAKQEMIQANLRLVI SIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR TIRIPVHMIETINKMNRISRQYLQETGEEPDSAKLAELMEMPEDKIRKIMKIAKEPISME TPIGDDDDSHLGDFIEDANNVAPAEAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMN TDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEENKS >gi|241318952|gb|ACQV01000029.1| GENE 92 98108 - 99460 1085 450 aa, chain - ## HITS:1 COG:NMA1053 KEGG:ns NR:ns ## COG: NMA1053 COG0617 # Protein_GI_number: 15794003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 1 428 1 429 453 623 71.0 1e-178 MLKKWLHKVLPKKHVKSLPEKEIIPLEQHGIRADMLSFAAEKIAKRLHEAGFQAYVVGGA VRDLLLGVEPKDFDIATDATPEQIRKVFRRSRIIGRRFQIVHVMIGPETIEVTTFRGGDK VQQNAQGRIMKDNTYGSIEEDAMRRDFTCNALYYDPIKEEIWDFHQGVADVADKKLVMIG DPAERYQEDPVRILRAVRLSGKLGFEVEEQTALPIAEYAGRLKNEPVARLFDEILKILFS GHSRACLKRLNELGIPEGIHPLLDALKTAEAADKRMIMLALKNTDERIRADKSVSVGFVL AAVLWPTLNAMWQRNLNHGQKPVPALMDAMNTMRDTVEKGWGVPQRFSATMREIWQFQPQ FDNMRGARPYRLLSQARFRAAYDFLILRSEVGEVDKEMASWWTTFQHADEETRQQMTATN DHKRQKQNGSTDGKPKRRRRRPKKKTTEAE >gi|241318952|gb|ACQV01000029.1| GENE 93 99676 - 99861 417 61 aa, chain + ## HITS:1 COG:no KEGG:NMO_1274 NR:ns ## KEGG: NMO_1274 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 61 1 61 61 75 77.0 5e-13 MYHYKSEATQFLDKLMEDNPEMEAQRLENRHLLWDVTLNPTEQAEFEAAKVNKKPYTYYQ D >gi|241318952|gb|ACQV01000029.1| GENE 94 99874 - 100542 773 222 aa, chain + ## HITS:1 COG:NMA1653 KEGG:ns NR:ns ## COG: NMA1653 COG4122 # Protein_GI_number: 15794547 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 222 355 78.0 5e-98 MTTNTHNTDPALQHYLNSIGQSEHPVLTALRERTQSHRLGKMAIAQEQAAMLVWLAKLLN AKKYLEVGVFTGYSSTAMALALPADGKITACDINVTFTDIARETWQAAGIAHKISLHLQP ALLTLDDLIAQGESESYDLALIDADKPPTPKYFERCLQLVRSGGVIAIDNILLGGRVMNE AAENDPPSLDILRHFNQNLPHDTRIIPITLPVGDGLTLLLKK >gi|241318952|gb|ACQV01000029.1| GENE 95 100557 - 101312 721 251 aa, chain + ## HITS:1 COG:NMB1440 KEGG:ns NR:ns ## COG: NMB1440 COG1729 # Protein_GI_number: 15677298 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 49 238 42 224 237 197 55.0 2e-50 MKTLSHSLFLLPLTLLAASCAVSHPPQSADNPNFVLPDIPREPLHEKNIPYPRLDEQTQI DHLGIQIARLERTVEELNQRLHTLEQQRNIKRTTTSVSNPKAQRLDDRKLKMNYLANGGG VPSETDSAAQNELRLYNQAQKYYQRNNFSAAVAILKEADGGNGSEIARRNMYLLLQSQQR LGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIARSTWRKLIQSFPNSEA AKRASISLKQR >gi|241318952|gb|ACQV01000029.1| GENE 96 101392 - 101877 823 161 aa, chain + ## HITS:1 COG:NMA1651 KEGG:ns NR:ns ## COG: NMA1651 COG0041 # Protein_GI_number: 15794545 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Neisseria meningitidis Z2491 # 1 160 1 160 161 222 91.0 2e-58 MIQVGIIMGSNSDWPVMQQAAQFLKEFGVEYEARVVSAHRTPDLMFEYAETARERGIKAI IAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIVQMPKGVPVATFAIGEAGA ANAALFAISLLANENPELAEKLAAFRAKQEQTVLAMELPEA >gi|241318952|gb|ACQV01000029.1| GENE 97 101974 - 102306 357 110 aa, chain + ## HITS:1 COG:no KEGG:Coch_0293 NR:ns ## KEGG: Coch_0293 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 1 106 1 105 110 67 39.0 1e-10 MKTLAFVLLSTLLCACQSPSTSAQSTATPSQQQAQDTTGNLIIFYNAQTGSAPLLKAVKT SGATLVYEYKNLHGIAIRPSSKTNIEDAIAYFKKVNGVLSVEQDRLLKLQ >gi|241318952|gb|ACQV01000029.1| GENE 98 102389 - 104182 2478 597 aa, chain - ## HITS:1 COG:NMA1270 KEGG:ns NR:ns ## COG: NMA1270 COG0119 # Protein_GI_number: 15794202 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Neisseria meningitidis Z2491 # 81 597 1 517 517 856 87.0 0 MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGSLPLAQLQKLTALAEAQ GRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTMRDGEQSPGASMTKEEKIRIARQLEKM GVDVIEAGFAAASPGDFESVNAIAKIITKSTVCSLARAVENDVRKAGEAVSPAPNKRIHT FIATSPIHMEHKLKMKPQQVIDAAVKAVKIAKEYTDDVEFSAEDAVRSDLDFLAKIFTAV IEAGATTINIPDTVGYSIPSVWYERISNIIKSVPNGDKVVWSTHCHNDLGMAVANSLAAV QAGVRQVECTINGLGERAGNASLEEIVMALKVRHDLFGLETGIDTTQIVPVSKLVSTITG YPIQPNKAVVGANAFAHESGIHQDGVLKHPETYEIMTAESVGWSTNRLTLGKLSGRNAFK TKLADLGIELESEEALNAAFARFKELADKKREIFDEDLHALVSDEMGSLNAESYKFISQK ISTETGEEPRANIVFSIRGEEKHATATGSGPVDAIFKAIESVAQSGATLQIYSVNAVTQG TESQGETSVRLQRGDRVVNGQGADTDVLVATAKAYLSALSKLEFGQAKPKAQGSGMI >gi|241318952|gb|ACQV01000029.1| GENE 99 104409 - 105524 865 371 aa, chain + ## HITS:1 COG:NMA1400 KEGG:ns NR:ns ## COG: NMA1400 COG2890 # Protein_GI_number: 15794312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Neisseria meningitidis Z2491 # 38 369 1 329 331 449 69.0 1e-126 MPHTIPTNRSDIEWRNESTQKPPKQAVYIQEAGAAEILKNAHEQTATVWTGDFHNAKQVL VAMKKRIRRPSEKKKDAPADIQTAFHAHRMKQAQQSRLFNMLAVEIQPNFQLDNARAPDI YAALCDVYDTLNDKPFLLPLNQLLGFIGAHEWHKKGIDIPQLDGKIHVPFGVFSPLRGEY LDLIAQAPLAPNIQTAFDIGTGSGVIAAILTKRGIPNIIATDTNPKAIACATANLKRLGL NKAVNIQSIDLFPKSCADLIVCNPPWLPAKPTSAIETALYDPNHAMLTAFLNGVRKHLNP NGEAWLIISDLAEHLHLHDKDFLNQCFQTASLNVVDILKTKPQHKKAIDETDPLAFARNK ETTYLYRLKTI >gi|241318952|gb|ACQV01000029.1| GENE 100 105646 - 106119 858 157 aa, chain - ## HITS:1 COG:NMA1376 KEGG:ns NR:ns ## COG: NMA1376 COG2193 # Protein_GI_number: 15794297 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis Z2491 # 1 157 1 157 157 256 93.0 2e-68 MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHFFKQSIREMKSADDLIE RILFLEGLPNLQELGKLLIGESTEEIIACDLKKEYEKHDALVAAIALAEEQQDYVSRDLL EKQKDINEEHIDWLETQQELIGKVGLPNYLQTAAQED >gi|241318952|gb|ACQV01000029.1| GENE 101 106149 - 106613 836 154 aa, chain - ## HITS:1 COG:NMB1207 KEGG:ns NR:ns ## COG: NMB1207 COG2193 # Protein_GI_number: 15677080 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 278 96.0 2e-75 MQGNQAVIDYMNELLSGELAARDQYFIHSRMYSEWGYTKLFERLNHEMEEETTHAEDFIR RILMLGGTPKMTRAELNIGTDVISCLKADLNTEYEVRDALKKGIKLCEEAQDYVTRDLMV AQLKDTEEDHAHWLEQQLRLIELVGEGNYYQSQL >gi|241318952|gb|ACQV01000029.1| GENE 102 107033 - 108844 2777 603 aa, chain + ## HITS:1 COG:NMA1370 KEGG:ns NR:ns ## COG: NMA1370 COG1217 # Protein_GI_number: 15794291 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Neisseria meningitidis Z2491 # 1 603 1 603 603 1149 95.0 0 MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNT AIEYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGL KPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLDENDESS DMRPLFETILKHTPPPSGNADATLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMN HEEQVAQGRINQLLGFQGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLS VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRVEDTADADLFRVSGR GELHLTILLENMRREGFELAVGKPRVVFREINGQKCEPYENLTVDVPDENQGAVMEELGR RRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFLTLTRGTGLMSHVFDDYAPVKPDMPG RHNGVLVSQEQGEAVAYALWNLEDRGRMFISPNDKVYEGMIIGIHSRDNDLVVNPLKGKK LTNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFK KLD >gi|241318952|gb|ACQV01000029.1| GENE 103 108946 - 109902 630 318 aa, chain - ## HITS:1 COG:NMA1783 KEGG:ns NR:ns ## COG: NMA1783 COG2207 # Protein_GI_number: 15794676 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Neisseria meningitidis Z2491 # 1 299 1 296 301 374 64.0 1e-103 MDILDRLVELAQVKGSVDVQCLFRGEWYVRHEPKRAHGLVHIVTAGSGYIRIDGEQEARL LSAGDIIFFPRSVGHTLSSDSSCENLGVSVLTSEKGAFKVKQSHAGGDAALHLFCARFEY EAQADIMAGLPDMVLLNINHPSLQYLVALLQYESGQALSGSVAVVDALASVLLVFLLRAS LEKNGEAQLSGLLNGWQDKRLRNLLQAVVDKPEEEWNIEKMTAIANLSRAQLMRVFKQQT GTSPHAFVNSIRLQQGALLLKQTADSVLSVALSVGFQSETHFGKAFKKQYGISPGQYRKN DRTDEAAVQAEEMPIYFI >gi|241318952|gb|ACQV01000029.1| GENE 104 110031 - 110366 755 111 aa, chain + ## HITS:1 COG:NMA1782 KEGG:ns NR:ns ## COG: NMA1782 COG0599 # Protein_GI_number: 15794675 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Neisseria meningitidis Z2491 # 1 111 1 111 111 128 94.0 3e-30 MFKDWPEHTALVKKAFGELGKNHPKMLQAYGALDQAAAAEALDAKTRELIAIAVAITTRC ESCISVHAAAAAKAGATESEIAGALATAIALNAGAAYTYALRALEAVETQR >gi|241318952|gb|ACQV01000029.1| GENE 105 110479 - 110847 663 122 aa, chain + ## HITS:1 COG:NMA0994 KEGG:ns NR:ns ## COG: NMA0994 COG0607 # Protein_GI_number: 15793951 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis Z2491 # 26 122 23 119 119 140 72.0 8e-34 MKKLLTAVLFAAAIATPLAASAASMPKVEKSAAQPAKAKGVWIDVRSAEEFKEGHLQGAL NIPHDQIVDRIKSVSPDKNAPVNLYCRSGRRAEAALTELKKAGYTNVTNHGGYEDLVKKG LK >gi|241318952|gb|ACQV01000029.1| GENE 106 110903 - 111241 436 112 aa, chain - ## HITS:1 COG:no KEGG:DNO_0103 NR:ns ## KEGG: DNO_0103 # Name: not_defined # Def: hypothetical protein # Organism: D.nodosus # Pathway: not_defined # 1 96 1 96 98 100 56.0 2e-20 MKHYELDPKALLGGVIASDGNQEIVQLSLQKDNEIPVYEADAIILLLVLNGKAEIKTVDE VLQTEGLQVIRLEPMEAHSIRALADNTNILVIKQLIHETGLSKRLRFGSCCL >gi|241318952|gb|ACQV01000029.1| GENE 107 111340 - 112095 874 251 aa, chain + ## HITS:1 COG:NMB1484 KEGG:ns NR:ns ## COG: NMB1484 COG0496 # Protein_GI_number: 15677337 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Neisseria meningitidis MC58 # 1 245 1 245 248 417 79.0 1e-117 MNILISNDDGYLAPGLAVLARVCAEFANVRVVAPERDRSGVSNSLTLDRPLQLKQAENGF YYVNGTPTDCIHVGQHALADFKPDLVLSGINNGANMGDDTLYSGTVAAATEAYLMGIPAI AFSLADSSGRYWETAEKAAWILLSYFLKRPISEPILWNINIPAVAPEDIQGIKITRLGRR HHEQSIVPMYNPRGEQIYWIGPVGDVSDSEEGTDFGECASGFITITPLQVDLTAYGQMEQ TASFWSEIPAP >gi|241318952|gb|ACQV01000029.1| GENE 108 112189 - 113100 1013 303 aa, chain + ## HITS:1 COG:NMB1483 KEGG:ns NR:ns ## COG: NMB1483 COG0739 # Protein_GI_number: 15677336 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Neisseria meningitidis MC58 # 89 303 176 415 415 255 63.0 7e-68 MLKKSVSYAGSAALVLLLAACASQQPAPVVVGTQSGGSTTSSTADNPYGAAPYNTNTSPA ADAPYTPPASTPAPTYNSGSTGTYTPSYAPVDINAATHTVVRGDTVYNISKRYNITQDNL RAWNNLADNTISIGQTLRVKPEGYVAPAASASKPSTPTTTTTAPTPSTPANTPTVSTGSS RNVSGITWQRPTTGNVIANFGGSNKGVDIAGTQGQPVVAAADGKVVYAGSGLRGYGNLVI IQHNSSFLSAYGHNQRLLVNENQTVKRGQTIAHMGNTDASRTQLHFEIRQNGKPVNPANY VAF >gi|241318952|gb|ACQV01000029.1| GENE 109 113179 - 114702 1536 507 aa, chain + ## HITS:1 COG:NMB1434 KEGG:ns NR:ns ## COG: NMB1434 COG1502 # Protein_GI_number: 15677292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Neisseria meningitidis MC58 # 21 507 22 508 508 741 75.0 0 MKFHLPFLYTLLLGGCAAFLPSLDERTQSSYLDIPATPRLDSALGIPSASSKTDVSHIYL LNDAHEAFVARAALIESADHTLDLQYYIWHNDISGKLLFNLIHRAAERGVRVRLLLDDNN TNGMDDLLLALDNHPNIEVRLFNPFIFRKWRALGYVADFPRLNRRMHNKSFTADNRATIL GGRNIGDEYFKVNDDTIFADLDILATGRVVTEVSQDFDRYWASHSAYNATSIIKRGNLQK GLAELNYTDKDKNQTLIRYRQSIEHSNLYQKMQSNLMEWQSVSTRLISDDPAKGLDRDRH KPPISERLQDALKQPEKSVYLVSPYFVPTKSGVKAIEKLIHNGVDVTVLTNSLQATDVAA VHSGYVKYRKPLLKAGVKLYELQPNHAVPTSKDRGLTGSSATSLHAKTFIVDEKRIFIGS FNLDPRSARLNTEMGVVIESPEIAGQMQRTLVTTTPSYAYQVTLGNYNKLYWYDPSEKRT YAHEPEAKFWKRMTSKILSILPIEGLL >gi|241318952|gb|ACQV01000029.1| GENE 110 114725 - 114920 59 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760525|ref|ZP_04758618.1| ## NR: gi|241760525|ref|ZP_04758618.1| lipoprotein [Neisseria flavescens SK114] # 1 65 1 65 66 114 100.0 2e-24 MRPEEFKPFRFQRKTLFVCTTGLLLASCDTTGKHKSHKPQTTARKVQPVRISHIDHTQGS QELML Prediction of potential genes in microbial genomes Time: Thu May 26 12:02:14 2011 Seq name: gi|241318756|gb|ACQV01000030.1| Neisseria flavescens SK114 ctg1118407793882, whole genome shotgun sequence Length of sequence - 162809 bp Number of predicted genes - 154, with homology - 152 Number of transcription units - 89, operones - 32 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 5/0.033 + CDS 1 - 291 312 ## COG3039 Transposase and inactivated derivatives, IS5 family 2 2 Tu 1 . + CDS 434 - 775 238 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 906 - 956 -0.6 + Prom 787 - 846 4.8 3 3 Tu 1 . + CDS 1046 - 3958 2027 ## COG3468 Type V secretory pathway, adhesin AidA + Term 3995 - 4043 14.4 + Prom 3965 - 4024 3.7 4 4 Op 1 . + CDS 4131 - 4481 293 ## PROTEIN SUPPORTED gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 5 4 Op 2 . + CDS 4490 - 4978 191 ## COG3335 Transposase and inactivated derivatives + Prom 5035 - 5094 3.9 6 5 Tu 1 . + CDS 5172 - 6176 1327 ## COG0167 Dihydroorotate dehydrogenase + Term 6195 - 6234 9.1 - Term 6181 - 6220 9.1 7 6 Tu 1 . - CDS 6234 - 6827 668 ## COG0164 Ribonuclease HII - Prom 6940 - 6999 4.3 + Prom 6897 - 6956 5.3 8 7 Tu 1 . + CDS 6982 - 8118 1784 ## COG1289 Predicted membrane protein + Term 8184 - 8226 8.8 - TRNA 8288 - 8364 85.0 # Met CAT 0 0 + Prom 8414 - 8473 5.8 9 8 Tu 1 . + CDS 8668 - 10557 2457 ## COG0422 Thiamine biosynthesis protein ThiC + Term 10575 - 10613 10.2 - Term 10563 - 10601 10.2 10 9 Op 1 . - CDS 10649 - 12187 1080 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 11 9 Op 2 11/0.000 - CDS 12197 - 13372 1072 ## COG0763 Lipid A disaccharide synthetase - Prom 13469 - 13528 1.7 - Term 13481 - 13517 8.2 12 10 Op 1 25/0.000 - CDS 13532 - 14308 1394 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 13 10 Op 2 18/0.000 - CDS 14383 - 14832 847 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 14 10 Op 3 15/0.000 - CDS 14906 - 15946 1494 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 15 10 Op 4 17/0.000 - CDS 16048 - 16557 751 ## COG2825 Outer membrane protein - Prom 16593 - 16652 2.7 - Term 16568 - 16616 -0.2 16 10 Op 5 18/0.000 - CDS 16669 - 19065 3587 ## COG4775 Outer membrane protein/protective antigen OMA87 17 10 Op 6 17/0.000 - CDS 19069 - 20409 1301 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 - Prom 20457 - 20516 3.5 18 10 Op 7 . - CDS 20541 - 21722 1297 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 19 11 Op 1 . - CDS 21840 - 22589 857 ## COG2859 Uncharacterized protein conserved in bacteria 20 11 Op 2 32/0.000 - CDS 22623 - 23417 1177 ## COG0575 CDP-diglyceride synthetase 21 11 Op 3 19/0.000 - CDS 23423 - 24058 476 ## COG0020 Undecaprenyl pyrophosphate synthase - Term 24179 - 24213 3.6 22 11 Op 4 . - CDS 24227 - 24784 821 ## COG0233 Ribosome recycling factor - Prom 24989 - 25048 4.2 + Prom 24740 - 24799 7.7 23 12 Tu 1 . + CDS 24989 - 25339 467 ## gi|255067163|ref|ZP_05319018.1| transposase + Prom 25519 - 25578 2.6 24 13 Tu 1 . + CDS 25679 - 26140 418 ## COG2801 Transposase and inactivated derivatives + Term 26167 - 26210 -0.1 - Term 26083 - 26123 3.2 25 14 Tu 1 . - CDS 26225 - 27403 2163 ## COG0126 3-phosphoglycerate kinase - Prom 27573 - 27632 3.3 + Prom 27511 - 27570 3.8 26 15 Op 1 14/0.000 + CDS 27597 - 28946 1802 ## COG0612 Predicted Zn-dependent peptidases 27 15 Op 2 . + CDS 29005 - 30303 2258 ## COG0612 Predicted Zn-dependent peptidases + Term 30321 - 30360 10.0 - Term 30304 - 30352 11.5 28 16 Op 1 . - CDS 30434 - 31816 747 ## COG2931 RTX toxins and related Ca2+-binding proteins 29 16 Op 2 . - CDS 31847 - 32704 375 ## gi|241760608|ref|ZP_04758700.1| hypothetical protein NEIFL0001_2267 + Prom 32761 - 32820 5.6 30 17 Tu 1 . + CDS 33019 - 33135 83 ## - Term 33848 - 33897 10.4 31 18 Op 1 . - CDS 33914 - 35752 2667 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Term 35763 - 35788 -0.5 32 18 Op 2 . - CDS 35858 - 36991 348 ## XCV0617 hypothetical protein 33 18 Op 3 . - CDS 37002 - 37403 107 ## XCV0616 putative secreted protein 34 18 Op 4 . - CDS 37424 - 37906 154 ## Smal_2437 chitinase-like protein 35 18 Op 5 . - CDS 37980 - 38141 150 ## gi|298370536|ref|ZP_06981852.1| chitinase, class I 36 19 Tu 1 . - CDS 38288 - 38578 127 ## ECA2200 hypothetical protein - Prom 38621 - 38680 7.2 37 20 Op 1 . - CDS 38848 - 39372 352 ## gi|241760642|ref|ZP_04758734.1| hypothetical protein NEIFL0001_2274 38 20 Op 2 . - CDS 39420 - 40793 2321 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 39 20 Op 3 . - CDS 40892 - 41176 475 ## NMC0016 hypothetical protein 40 20 Op 4 . - CDS 41237 - 41884 646 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 41917 - 41976 5.9 + Prom 41864 - 41923 5.5 41 21 Tu 1 . + CDS 41949 - 42950 1604 ## COG4143 ABC-type thiamine transport system, periplasmic component + Term 42973 - 43031 18.2 + Prom 42977 - 43036 3.3 42 22 Op 1 2/0.267 + CDS 43063 - 43908 1024 ## COG0668 Small-conductance mechanosensitive channel 43 22 Op 2 . + CDS 43984 - 44451 315 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 44465 - 44513 16.3 - Term 44451 - 44501 12.1 44 23 Op 1 9/0.000 - CDS 44534 - 45799 1670 ## COG2837 Predicted iron-dependent peroxidase - Prom 45871 - 45930 1.6 - Term 45874 - 45922 13.1 45 23 Op 2 7/0.000 - CDS 45934 - 47100 2097 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 46 23 Op 3 . - CDS 47113 - 47937 1040 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 48115 - 48174 8.6 + Prom 48135 - 48194 9.8 47 24 Tu 1 . + CDS 48318 - 49493 1616 ## COG1858 Cytochrome c peroxidase + Term 49512 - 49553 10.0 + Prom 49547 - 49606 3.9 48 25 Tu 1 . + CDS 49636 - 49962 777 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 49987 - 50038 8.0 + Prom 49997 - 50056 3.2 49 26 Tu 1 . + CDS 50089 - 50337 518 ## COG5007 Predicted transcriptional regulator, BolA superfamily + Term 50355 - 50393 10.2 - Term 50410 - 50455 1.0 50 27 Op 1 . - CDS 50483 - 51277 1047 ## COG0500 SAM-dependent methyltransferases - Prom 51299 - 51358 8.3 51 27 Op 2 1/0.333 - CDS 51362 - 51799 250 ## COG0602 Organic radical activating enzymes - Prom 51826 - 51885 1.8 52 28 Op 1 . - CDS 51946 - 53781 505 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 53 28 Op 2 . - CDS 53792 - 54898 1051 ## Pnap_4604 hypothetical protein 54 28 Op 3 . - CDS 54939 - 55436 476 ## gi|241760628|ref|ZP_04758720.1| conserved hypothetical protein 55 28 Op 4 . - CDS 55429 - 57441 1242 ## gi|241760686|ref|ZP_04758778.1| hypothetical protein NEIFL0001_2293 56 28 Op 5 . - CDS 57441 - 61361 2081 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 61384 - 61443 5.0 57 29 Tu 1 . - CDS 61453 - 62199 875 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 62206 - 62265 3.6 58 30 Op 1 3/0.067 + CDS 62417 - 62914 319 ## COG1040 Predicted amidophosphoribosyltransferases 59 30 Op 2 2/0.267 + CDS 62979 - 63443 598 ## COG0219 Predicted rRNA methylase (SpoU class) 60 30 Op 3 . + CDS 63492 - 64211 313 ## PROTEIN SUPPORTED gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) + Term 64250 - 64298 13.0 61 31 Op 1 . + CDS 64310 - 64894 1014 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 62 31 Op 2 . + CDS 64908 - 65141 406 ## gi|241760659|ref|ZP_04758751.1| putative lipoprotein 63 31 Op 3 . + CDS 65196 - 65903 978 ## gi|241760591|ref|ZP_04758683.1| hypothetical protein NEIFL0001_2301 - Term 66115 - 66145 0.2 64 32 Tu 1 . - CDS 66173 - 66355 75 ## gi|254673934|emb|CBA09718.1| hypothetical protein - Term 66361 - 66408 13.2 65 33 Op 1 . - CDS 66427 - 67749 1575 ## COG2821 Membrane-bound lytic murein transglycosylase - Prom 67778 - 67837 2.2 66 33 Op 2 . - CDS 67839 - 68411 487 ## COG1714 Predicted membrane protein/domain - Prom 68607 - 68666 6.5 + Prom 68503 - 68562 5.7 67 34 Tu 1 . + CDS 68655 - 69770 1925 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 69784 - 69827 4.0 - Term 69815 - 69852 9.1 68 35 Tu 1 . - CDS 69860 - 70657 1222 ## D11S_2007 lipoprotein GNA1870 - Prom 70687 - 70746 11.2 + Prom 70774 - 70833 9.6 69 36 Tu 1 . + CDS 70854 - 71336 681 ## COG0262 Dihydrofolate reductase + Term 71346 - 71405 15.6 - Term 71339 - 71389 13.4 70 37 Tu 1 . - CDS 71420 - 71686 450 ## Tmz1t_2017 hypothetical protein - Prom 71804 - 71863 4.1 + Prom 71744 - 71803 6.2 71 38 Tu 1 . + CDS 71854 - 72309 335 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 72318 - 72374 12.3 - Term 72313 - 72355 8.1 72 39 Op 1 . - CDS 72380 - 74530 2261 ## COG1199 Rad3-related DNA helicases - Prom 74557 - 74616 3.6 73 39 Op 2 . - CDS 74695 - 74931 387 ## COG3205 Predicted membrane protein - Prom 74971 - 75030 8.5 + Prom 74911 - 74970 5.6 74 40 Tu 1 . + CDS 75042 - 75992 1292 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 76035 - 76086 15.1 - Term 76181 - 76229 8.6 75 41 Tu 1 . - CDS 76250 - 77698 2287 ## COG0362 6-phosphogluconate dehydrogenase - Prom 77842 - 77901 6.5 + Prom 77968 - 78027 7.3 76 42 Tu 1 . + CDS 78181 - 79950 1697 ## COG0405 Gamma-glutamyltransferase + Term 79973 - 80017 8.1 - Term 79961 - 80003 7.7 77 43 Tu 1 . - CDS 80188 - 81102 1156 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase - Prom 81128 - 81187 5.0 + Prom 81492 - 81551 6.1 78 44 Tu 1 . + CDS 81753 - 82757 1634 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 82782 - 82850 11.0 - Term 82786 - 82823 9.1 79 45 Tu 1 . - CDS 82853 - 83527 519 ## COG1720 Uncharacterized conserved protein - Prom 83648 - 83707 7.3 + Prom 83557 - 83616 7.7 80 46 Op 1 2/0.267 + CDS 83698 - 84333 603 ## COG1335 Amidases related to nicotinamidase 81 46 Op 2 2/0.267 + CDS 84380 - 85348 478 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 85414 - 85448 -0.5 + Prom 85392 - 85451 6.4 82 47 Op 1 29/0.000 + CDS 85533 - 86282 998 ## COG2086 Electron transfer flavoprotein, beta subunit 83 47 Op 2 2/0.267 + CDS 86293 - 87225 1238 ## COG2025 Electron transfer flavoprotein, alpha subunit 84 47 Op 3 . + CDS 87287 - 87898 445 ## COG1739 Uncharacterized conserved protein + Term 87901 - 87955 6.1 85 48 Tu 1 . - CDS 87953 - 88264 428 ## NMO_0026 hypothetical protein - Prom 88361 - 88420 7.3 + Prom 88302 - 88361 4.5 86 49 Op 1 2/0.267 + CDS 88404 - 89675 1446 ## COG0151 Phosphoribosylamine-glycine ligase 87 49 Op 2 . + CDS 89747 - 90316 259 ## COG0009 Putative translation factor (SUA5) - Term 90607 - 90657 11.6 88 50 Tu 1 . - CDS 90702 - 91142 444 ## NMCC_2105 lipoprotein - Prom 91201 - 91260 4.8 + Prom 91251 - 91310 6.6 89 51 Tu 1 . + CDS 91353 - 92723 2201 ## COG0015 Adenylosuccinate lyase + Term 92813 - 92852 10.0 - Term 92795 - 92848 12.2 90 52 Tu 1 . - CDS 92858 - 94426 2032 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 94559 - 94618 5.5 + Prom 94483 - 94542 4.5 91 53 Tu 1 . + CDS 94572 - 96104 686 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 96120 - 96154 1.2 - Term 96213 - 96270 17.3 92 54 Tu 1 . - CDS 96279 - 97505 1348 ## COG0477 Permeases of the major facilitator superfamily - Prom 97529 - 97588 6.7 93 55 Tu 1 . - CDS 97622 - 98020 601 ## gi|241760675|ref|ZP_04758767.1| hypothetical protein NEIFL0001_2340 94 56 Tu 1 . - CDS 98334 - 100379 2929 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 100493 - 100552 10.6 + Prom 100514 - 100573 9.1 95 57 Tu 1 . + CDS 100783 - 101451 833 ## BCAM0075 TetR family regulatory protein + Term 101465 - 101513 13.1 - Term 101453 - 101501 11.5 96 58 Tu 1 . - CDS 101559 - 101819 93 ## gi|619505|emb|CAA77880.1| IS1106 ORF2 - Prom 101866 - 101925 2.2 97 59 Tu 1 . + CDS 101781 - 102170 294 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 102332 - 102379 13.2 - Term 102319 - 102367 15.0 98 60 Op 1 22/0.000 - CDS 102385 - 103281 1154 ## COG0142 Geranylgeranyl pyrophosphate synthase 99 60 Op 2 . - CDS 103265 - 103492 377 ## COG1722 Exonuclease VII small subunit - Prom 103514 - 103573 4.1 100 61 Tu 1 . - CDS 103628 - 105484 2366 ## COG0557 Exoribonuclease R - Prom 105509 - 105568 3.4 - Term 105532 - 105574 10.2 101 62 Op 1 . - CDS 105593 - 106513 1245 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 106538 - 106597 2.6 - Term 106552 - 106605 12.2 102 62 Op 2 . - CDS 106613 - 107230 763 ## COG2979 Uncharacterized protein conserved in bacteria - Prom 107253 - 107312 3.4 + Prom 107300 - 107359 3.7 103 63 Tu 1 . + CDS 107381 - 108247 1277 ## COG1162 Predicted GTPases + Term 108284 - 108321 9.1 - Term 108271 - 108308 9.1 104 64 Op 1 . - CDS 108356 - 108550 268 ## gi|241760667|ref|ZP_04758759.1| hypothetical protein NEIFL0001_2351 105 64 Op 2 . - CDS 108574 - 110631 3094 ## COG0143 Methionyl-tRNA synthetase - Prom 110660 - 110719 4.1 - Term 110679 - 110738 19.1 106 65 Op 1 . - CDS 110758 - 112113 545 ## Smal_2435 putative lipase 107 65 Op 2 . - CDS 112110 - 112829 409 ## Smlt2989 hypothetical protein - Prom 112850 - 112909 3.3 108 65 Op 3 . - CDS 112911 - 113396 31 ## COG2890 Methylase of polypeptide chain release factors - Prom 113559 - 113618 5.8 109 66 Tu 1 . - CDS 113660 - 114913 2181 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 114978 - 115037 6.8 - Term 115056 - 115098 12.6 110 67 Op 1 28/0.000 - CDS 115110 - 116027 1300 ## COG2177 Cell division protein 111 67 Op 2 2/0.267 - CDS 116024 - 116674 299 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 116751 - 116810 6.0 - Term 116841 - 116885 8.1 112 68 Tu 1 . - CDS 116923 - 117405 633 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 117520 - 117579 4.4 + Prom 117491 - 117550 3.3 113 69 Op 1 2/0.267 + CDS 117575 - 117934 552 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 114 69 Op 2 . + CDS 117961 - 118617 766 ## COG1434 Uncharacterized conserved protein + Term 118655 - 118688 -0.9 - Term 118628 - 118672 10.8 115 70 Tu 1 . - CDS 118688 - 118945 297 ## BH0735 hypothetical protein - Prom 118971 - 119030 4.0 116 71 Tu 1 . - CDS 119063 - 119920 1226 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 120135 - 120194 6.9 117 72 Tu 1 . + CDS 120321 - 121715 2417 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 121727 - 121776 14.7 + Prom 122158 - 122217 10.1 118 73 Tu 1 . + CDS 122248 - 123198 459 ## gi|241760685|ref|ZP_04758777.1| hypothetical protein NEIFL0001_2367 + Term 123216 - 123254 10.2 + Prom 123200 - 123259 3.1 119 74 Op 1 . + CDS 123476 - 123814 483 ## NMB0002 hypothetical protein 120 74 Op 2 . + CDS 123874 - 124209 404 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Term 124228 - 124276 10.4 + Prom 124255 - 124314 9.2 121 75 Tu 1 . + CDS 124427 - 126736 2416 ## COG0514 Superfamily II DNA helicase + Term 126818 - 126873 -0.4 + Prom 126765 - 126824 5.4 122 76 Op 1 . + CDS 126961 - 127410 315 ## COG2259 Predicted membrane protein + Prom 127412 - 127471 1.7 123 76 Op 2 . + CDS 127495 - 127812 483 ## gi|225077489|ref|ZP_03720688.1| hypothetical protein NEIFLAOT_02552 + Term 127836 - 127874 4.7 124 77 Op 1 4/0.033 + CDS 127899 - 128741 883 ## COG3220 Uncharacterized protein conserved in bacteria 125 77 Op 2 . + CDS 128731 - 129417 704 ## COG3219 Uncharacterized protein conserved in bacteria + Term 129445 - 129490 -0.3 126 78 Tu 1 . - CDS 129364 - 129558 150 ## - Prom 129756 - 129815 3.9 + Prom 129469 - 129528 4.2 127 79 Op 1 . + CDS 129560 - 130138 756 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 128 79 Op 2 . + CDS 130151 - 130324 106 ## gi|241760676|ref|ZP_04758768.1| conserved hypothetical protein + Term 130335 - 130384 8.5 - Term 130503 - 130556 13.4 129 80 Op 1 16/0.000 - CDS 130564 - 134712 6105 ## COG2911 Uncharacterized protein conserved in bacteria 130 80 Op 2 . - CDS 134793 - 136634 2746 ## COG0729 Outer membrane protein - Prom 136665 - 136724 5.1 + Prom 136986 - 137045 8.7 131 81 Tu 1 . + CDS 137082 - 138305 1922 ## COG3633 Na+/serine symporter + Term 138330 - 138375 14.6 + Prom 138412 - 138471 4.0 132 82 Tu 1 . + CDS 138533 - 140389 235 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 140411 - 140450 10.0 - Term 140392 - 140445 13.2 133 83 Tu 1 . - CDS 140498 - 141226 1059 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 141249 - 141308 4.6 + Prom 141288 - 141347 4.0 134 84 Op 1 . + CDS 141367 - 142083 758 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 142095 - 142154 3.8 135 84 Op 2 . + CDS 142181 - 143284 1554 ## COG1186 Protein chain release factor B + Term 143296 - 143345 17.9 + Prom 143857 - 143916 10.6 136 85 Tu 1 . + CDS 143989 - 145446 1916 ## COG3104 Dipeptide/tripeptide permease + Term 145478 - 145526 13.2 + Prom 145684 - 145743 6.9 137 86 Op 1 30/0.000 + CDS 145783 - 146139 239 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A 138 86 Op 2 34/0.000 + CDS 146130 - 146612 453 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 139 86 Op 3 22/0.000 + CDS 146625 - 147218 859 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 140 86 Op 4 15/0.000 + CDS 147208 - 148464 1979 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 141 86 Op 5 23/0.000 + CDS 148464 - 148937 708 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 142 86 Op 6 12/0.000 + CDS 148995 - 150290 1832 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 143 86 Op 7 18/0.000 + CDS 150349 - 152610 2767 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 144 86 Op 8 . + CDS 152613 - 153689 1842 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 145 86 Op 9 . + CDS 153765 - 154160 429 ## COG3791 Uncharacterized conserved protein 146 86 Op 10 28/0.000 + CDS 154215 - 154694 635 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 147 86 Op 11 30/0.000 + CDS 154706 - 155377 976 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 148 86 Op 12 26/0.000 + CDS 155374 - 155679 527 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 149 86 Op 13 30/0.000 + CDS 155682 - 157706 2609 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit + Prom 157708 - 157767 1.9 150 86 Op 14 22/0.000 + CDS 157802 - 159298 2143 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 151 86 Op 15 . + CDS 159308 - 160750 1791 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 160768 - 160802 3.2 + Prom 160884 - 160943 4.6 152 87 Tu 1 . + CDS 160971 - 161270 399 ## NMCC_1886 hypothetical protein + Term 161284 - 161330 14.5 - Term 161276 - 161314 10.2 153 88 Tu 1 . - CDS 161423 - 162028 522 ## ABBFA_000292 hypothetical protein - Prom 162095 - 162154 6.7 154 89 Tu 1 . - CDS 162458 - 162799 231 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|241318756|gb|ACQV01000030.1| GENE 1 1 - 291 312 96 aa, chain + ## HITS:1 COG:NMB1054 KEGG:ns NR:ns ## COG: NMB1054 COG3039 # Protein_GI_number: 15678004 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 1 85 20 104 311 162 96.0 1e-40 HSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDNTLSELLELINRQLTEKNLKVEKA SAAVIDATIIQTAGSKQRQAIEVDEGRTSQRPNHTE >gi|241318756|gb|ACQV01000030.1| GENE 2 434 - 775 238 113 aa, chain + ## HITS:1 COG:NMA0221 KEGG:ns NR:ns ## COG: NMA0221 COG3039 # Protein_GI_number: 15793244 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 113 223 335 335 210 92.0 6e-55 MLEGIAEGTTVYADKGYDSKENRQHLKEHQLLDGIMRKACRNRPLTEAQTKRNRYLSKTR YVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVCA >gi|241318756|gb|ACQV01000030.1| GENE 3 1046 - 3958 2027 970 aa, chain + ## HITS:1 COG:YPO3984_2 KEGG:ns NR:ns ## COG: YPO3984_2 COG3468 # Protein_GI_number: 16124111 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 520 970 47 476 476 145 28.0 6e-34 MLTYKKEIFRKTLLHTLIASCFSIPALAVAAAGDTSPTMGTEGSGEFWKEPNQNIDGDYK ATLAPNSGEQFARPKGLIVRANNQVEIKGKTNINVTLASEANSGLAVDSNAAYGIAVGYD YAGGNASDTASLTLHNDANITVKNTENTVKSTKNFGGATAPFGHQLSGVKVYRKDGAKPV FNSEKKLTINVEDKTTDKIGDYLVGLYVSGDGAEANLKDSEITVKANGKFSAALKIGKPE LPNTEKPADYKGAVVNSTGRMVLNTEETKDSATVRLFGTKSRLIADSDTSSGEIKSGNSA VVFDTQDYATKVSAFFISDNVSRNEPNKDQEVRLNNTKITTTSDDASLIVADARKESSFA VTFAGNKVASWFNNGEFVAENAKFALKGKDSEAKAAENGWLAETKVAVTKGADLTFTLSD QAKAIGLMQQQSKGNVHSKLDVHVNNQAVWELKQKGDEQRSTINALTLDKGVLDASKNIP NGSTKTDYKVKLVKQDGTEGTLTSNNGEITLANGSYEDKLTVEGNYTANNGVLKVNTHWD SNDANNGKSDLLEITGNAEGTTKVVSLKADGTENMIDGTIGSIAADLAKNSTAVVRVQGE SNLKNFTGIAKTTGAGELQLASKKVGNTTEYFWTVVSTNNDAIYTASVPAYTLIPNLNLE VGYETVGTLHQRRGENQALSWEKSQANNQIWGRIIGKHIALDGKKRLNLSANLAGFQFGH DFDISSSENGGKRLTGGYVGYTHANSKFYDEYRAENGVVLDDKYTGKAKTENLHVGVTHT RYSEDSSYIDFVGQLSWMQNKYNSLNSKAKNHGLGVALSGEVGRPFVLSKEKTNNGDSWI IEPQAQLIYQYLGLNSFTDDMRSVHQDKQHNLRSRIGVRFAYNNLTDHEKVRTLYFTTNV WHNFRNTSASNIGEDNVTEKLAKTWGEVGLGAQFATSSNTHIYADARYEQSLSGTKHQGY KGSIGIKYSW >gi|241318756|gb|ACQV01000030.1| GENE 4 4131 - 4481 293 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984739|ref|ZP_01818007.1| IS630-Spn1, transposase Orf1 [Streptococcus pneumoniae SP3-BS71] # 1 116 1 116 116 117 48 3e-25 IAYSADLRNKALNYYEQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKL DRQKLAQYVEQHQDAYLHEIAKHFDCTPAAVCYALKQLGMTRKKRPPLTKNKTRPK >gi|241318756|gb|ACQV01000030.1| GENE 5 4490 - 4978 191 162 aa, chain + ## HITS:1 COG:NMA2184 KEGG:ns NR:ns ## COG: NMA2184 COG3335 # Protein_GI_number: 15795054 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 94 162 7 75 75 140 97.0 9e-34 MTQPAGFSDYQRVYLDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSLVSAQVGNRL IAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPL APYSPELNPIEKVWANIKRYLRTVLSDYARFDDAIMSYFDFN >gi|241318756|gb|ACQV01000030.1| GENE 6 5172 - 6176 1327 334 aa, chain + ## HITS:1 COG:NMA0042 KEGG:ns NR:ns ## COG: NMA0042 COG0167 # Protein_GI_number: 15793074 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 333 1 333 335 571 86.0 1e-163 MYSLVRPILFRFDAEKAHHFTLNSLRSIEKLGLLPKVDSHTRPTELMGLQLPNPVGLAAG LDKNGECIDAFAALGFGFVEIGTVTPKPQPGNPQPRLFRVPEHQGIINRMGFNNHGIDAM IRNIENSRFKGILGINIGKNAVTPIENAADDYLICLEKAYAHASYITVNISSPNTKNLRA LQGGDELSALLEALKNKQAQLAAAHGKYVPLAVKIAPDLDEAQIDDIAHVVKSVEMDGII ATNTTIDKSSLGSHPLAGEQGGLSGLPVREKSNQVLKLLAERIDGKLPIIGVGGIMNGAD AAEKIRLGASAVQVYSGLIYRGPELIKECLVALK >gi|241318756|gb|ACQV01000030.1| GENE 7 6234 - 6827 668 197 aa, chain - ## HITS:1 COG:NMA0075 KEGG:ns NR:ns ## COG: NMA0075 COG0164 # Protein_GI_number: 15793104 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Neisseria meningitidis Z2491 # 4 195 3 194 194 301 80.0 5e-82 MATVLSAGVDEAGRGPLVGSVFAAAVILPEHFDLPGLTDSKKLSEKKRDILAQLIKEQAV AWSIAFADPDEILQLNILHATMAAMKRSVEGLSVTPDKVWIDGNRVPKDLNVPAEAVVKG DSKIIEISAASVLAKTARDAEMYELAKRYPQYGFDCHKGYGTAQHLAALKQYGVLPEHRR DFAPVKTLLAQGNLFEE >gi|241318756|gb|ACQV01000030.1| GENE 8 6982 - 8118 1784 378 aa, chain + ## HITS:1 COG:NMA0079 KEGG:ns NR:ns ## COG: NMA0079 COG1289 # Protein_GI_number: 15793108 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 5 369 4 368 375 518 77.0 1e-147 MPAQSERLHFSERWLNAYERYRYRRHIHAFRLGLAIVFSTLLAKVFHLQHGEWIGMTVFV VLGMLQFQGAIYSKAVERMLGTAIGLGVGLAVLWLNQHYFQDGVFFYLIIGAASAVAGWS AVGKNGYVAMLAGLTMCMLIGDSSHHWLDSGLMRAMNVLIGAAIAIAAAKLLPLRSTLMW RFMLADNLTDCAKMIAEISNGKRMTRERLEQNMIKMRKINARMVKSRSHLAATSGESHIS NNMMEAMQHAHRKIVTTTELLLTTAAKLRAPTLNESEIRLLDRHFNQLQRELRLTVRLIK GHYAHRIRIDTSLNTELSKPAARLHYDWQGFLWLSTNMRNEIAALVILLQRSRNKWLDKK ELQRLKEYLRNDTDPEQQ >gi|241318756|gb|ACQV01000030.1| GENE 9 8668 - 10557 2457 629 aa, chain + ## HITS:1 COG:NMA0397 KEGG:ns NR:ns ## COG: NMA0397 COG0422 # Protein_GI_number: 15793405 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Neisseria meningitidis Z2491 # 1 629 1 633 633 1245 94.0 0 MTTTKKTGDEARRLSDLSEDIGIRFQYPNSDRVYIPGSRADIRVPLREIRQDDTYTAQGT EANPPIPVYDTSGAYGDPAAHIDLKQGLPHVRTAWLDERCDTEILPKLSSEYGTERAHDP KTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPEMEFVAIRERMKLDELFRRPEYAKL LKQHAGQSFGANIPTHPDQITPEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRVKING NLGNSAVTSSLTEEVEKMVWSLRWGADTIMDLSTGAHIHETREWIIRNAPVPIGTVPIYQ ALEKTGGIAEDLTWDLVRDTLIEQAEQGVDYFTLHAGVLLRYVPMTANRLTGIVSRGGSI MAKWCLAHHQENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIADANDESQFAELHTLGE LTAKAWEHDVQVMIEGPGHVPLQRVKENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITS GIGATNIGWYGTAMLCYVTPKEHLGLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDN ALEPKGFEFRWRDQFRLSLDPERAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVR DYADKQKAQQQGMEEKAVEFVKKGAKLYS >gi|241318756|gb|ACQV01000030.1| GENE 10 10649 - 12187 1080 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 506 5 519 524 420 41 1e-116 MNLLGALAKVGSLTMVSRILGFVRDTIIARAFGAGMATDAFFVAFKLPNLLRRVFAEGAF AQAFVPILAEYKETRSPEATQAFVCHVAGMLSFVLVIVTALGILAAPWVIYVSAPGFAKD ADKFQLSIDLLRVTFPYIFFISLSSFVGSILNSYHKFGIPAFTPTFLNISFIVFSLFFVP YFDPPVMALAWAVFVGGVLQLVFQLPWLAKLGFLKMPKLSFKNAAVNRVMKQMAPAILGV SVAQISLVINTIFASFLQSGSVSWMYYADRLMELPTGVLGVALGTILLPTLSKHAASQDT EQFSGLLDWGLRLCMLLTLPAAVGLAVLSFPLVTTLFMYREFTLHDAQMTQHALIAYSFG LIGLIMIKVLAPGFYARQNIKTPVKVAIFTLICTQLMNLAFISPLKHVGLSLAIGLGACL NAGLLFFLLRKHGIYRPGKGWAAFLVKMVISLVVMGSGLWLAQYYLPFEWVHVGGFKKAG QLCVLIALGGGLYFVSLAALGFRSHHFRRVEK >gi|241318756|gb|ACQV01000030.1| GENE 11 12197 - 13372 1072 391 aa, chain - ## HITS:1 COG:NMA0069 KEGG:ns NR:ns ## COG: NMA0069 COG0763 # Protein_GI_number: 15793098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Neisseria meningitidis Z2491 # 1 383 1 383 384 625 81.0 1e-179 MNPNSSPLIAISVGEASGDLLGAHLIRAIKARCPNARFTGIGGERMKAEGFESLYDQEKL AVRGFVEVIKRLPQILKIRKGLVNDLIRLKPDVFIGIDAPDFNLGVAEKLKQAGIHTIHY VSPSVWAWRRERVNKIVHQVNRVLCLFPMEPQLYIDAGGKAEFVGHPMAQTMPVEADRAA ARQKLGVPADVPVFAILPGSRVSEIDYMAAVFFQTALLLLKRYPQAQFLLPVATAATRKR ISEILAQPEFATLPITLTEKQSDTVCTAADVVLVTSGTATLEVALCKRPMVISYKISPLT YAYVKRKIKVPHVGLPNILLGKAAVPELLQHDAVPEKLAQAVADWYDHPEAVAALEQDFH ALHLLLKKDTAALAAAAVLEEAGFSDGLKDK >gi|241318756|gb|ACQV01000030.1| GENE 12 13532 - 14308 1394 258 aa, chain - ## HITS:1 COG:NMA0090 KEGG:ns NR:ns ## COG: NMA0090 COG1043 # Protein_GI_number: 15793119 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 258 1 258 258 508 94.0 1e-144 MTLIHPTAVIDPKAELDSSVKVGPYSIIGPNVQIGANTEIGPHVVINGHTTIGENNRIFQ FASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGIGETRIGDDNWIMAYCHLA HDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCQIGDYAMTAFAAGVHKDVPPY FMAAGYRAEPAGLNSEGMRRNGFTAEQIASVKDVYKTIYHRGIPFEEAKADILKRAETQS ELAVFKDFFAQSTRGIIR >gi|241318756|gb|ACQV01000030.1| GENE 13 14383 - 14832 847 149 aa, chain - ## HITS:1 COG:NMA0088 KEGG:ns NR:ns ## COG: NMA0088 COG0764 # Protein_GI_number: 15793117 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Neisseria meningitidis Z2491 # 1 149 1 149 149 283 97.0 8e-77 MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVTMNEPQFQGHFPDLPVM PGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDDARFKRQVIPGDQLVFEVELLTNK RGIGKFNAVAKVDGQVAVEAVIMCAKRVV >gi|241318756|gb|ACQV01000030.1| GENE 14 14906 - 15946 1494 346 aa, chain - ## HITS:1 COG:NMA0087 KEGG:ns NR:ns ## COG: NMA0087 COG1044 # Protein_GI_number: 15793116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Neisseria meningitidis Z2491 # 1 345 1 345 347 571 88.0 1e-163 MTSQAYTLSQIVSQLGGEWKGEDIAITAVRPLDQAQAEHISFLANPKYKAEVHDSQAGAV IVSPKAADEFTGRNLIVAADPYLYFAKVARLFSPIVKAQGGVHPTAVVEAGAKVPASCEI GANAYIGANAVLGEGCRILANAVVQHNCTLGDEVVLHPNAVIYYGCTLGNRVEIHSGAVI GADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNIDRGAMSDTTVGNGTKIDNQVQIG HNCKIGSHTVIAAKTGISGSVTIGNYCIIGGGVGTVGHIEIADKTTIGGGTSVTHSITDS GQHLAGIFPMSGYKDWARNAVYIHRLSEMNKRLKTLEKQLADSDEA >gi|241318756|gb|ACQV01000030.1| GENE 15 16048 - 16557 751 169 aa, chain - ## HITS:1 COG:NMA0086 KEGG:ns NR:ns ## COG: NMA0086 COG2825 # Protein_GI_number: 15793115 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 9 168 6 165 166 170 63.0 1e-42 MSKIADTLRVLAVALPGFVLLPQAAADGVQKIGFINTERVYQESKQAQSIQMTLEKEFKS RQTALQKLQQEGEALERKLSGDKLSDSQREAETQKWRNLVQKFRKQQAELAEDYNLRRNE EFAALQQNANRVIVDLAKREGYDFILQDVIYVNGRYDITDSVIKALNAH >gi|241318756|gb|ACQV01000030.1| GENE 16 16669 - 19065 3587 798 aa, chain - ## HITS:1 COG:NMA0085 KEGG:ns NR:ns ## COG: NMA0085 COG4775 # Protein_GI_number: 15793114 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Neisseria meningitidis Z2491 # 1 798 1 797 797 1351 84.0 0 MKLNQIASALMVLSLSPMALADFTIQDIRVEGLQRTEPSTVFNYLPVKVGDNFNDARSEE IIKKLYATGFFDDVRVETMDNQVLLTVIERPTISSLNITGAKMLQNDAIKKNLEAFGLAQ SQYFNQATLNQAVAGLKEEYLSRGKQSVQITPTVTKLARNRVSIDIAIEEGKSTKITDIS FEGNEVYSDRRLMKQMSLSEGGMWTWITKSNQFNEQKFAQDMEKITNFYQNNGYFNFRIL DTDIQTNEDKTKQTIKVTVSEGDRFRWGNVRIEGDTLEVPKEDLEKLLTMKPGKWYERAQ MSNSLEAIQNRMGQAGYAFSEINVQPIPNAETHTVDFVLTVQPGRKIYVNEINITGNNKT RDEVIRRELRQMESAPYDSAKLQRSKERVELLGYFDNVQFDAVPVANTPDQVDLNMSLTE RSTGSLDLSAGWVQDTGLVMSAGVAQDNLFGTGKSVALRASRSKTTVNGSLSFTDPYFTP DGVSLGYDLYGKSYDPRKASSSTKQYKTTTFGGGLRIGIPVTEYDRVNFGLAAERLTVNT YKGAPKRYADFINQYGKGDGSGVGNFKGWLYKGTIGWGRNKTDNALWPTRGYLTGVNGEI ALPGSDLQYYTLTHNQTWFFPLSKDFTLMLGGEVGYGNGYGKTKTMPFFENFYGGGLGSV RGFESGTLGPKVYDEYGEKISYGGNKKANVSAELLFPMPGIKDSRTVRLSLFADAGSVWD GKTYNDGSSSNSNGVSQNVYGVGTTHKSTFKNELRYSAGAAVTWLSPLGPMKFSYAYPIK KKEGDEIQRFQFQLGTTF >gi|241318756|gb|ACQV01000030.1| GENE 17 19069 - 20409 1301 446 aa, chain - ## HITS:1 COG:NMB0183 KEGG:ns NR:ns ## COG: NMB0183 COG0750 # Protein_GI_number: 15676110 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Neisseria meningitidis MC58 # 1 446 1 446 446 704 78.0 0 MQTFLAFIVAILILVSLHEFGHYIVARWCGVKVVRFSVGFGKPFFTRKRGDTEWCLAPIP LGGYVKMVDTREGEVAEADLPYAFDKQHPAKRIAIVAAGPLTNLILAVLLYGLSFSFGVT ELRPYVGMVEPASIAAKAGFQEGDKIVSVNGIAVKDWSDAQTEMVLNLEAGPVKVAVQTA SNTQAIRIIDAAGTPEAGKVAKNQGNIGLLPFRITNRIGKVLANSPAEKAGLKENDKLLT ADGKPIESWQAWTELFRASPGKRIELTYERDGKILATAIRPDSVEQSAGVLVGRAGLAAQ ADKEWDKTIRYRYTPSVAQAFELGWNKTVNYSWTTLKFFGKLVTGNASLNHISGPLTIAD VAGQSAKLGLQSYLEFLALVSISLGVLNLLPVPVLDGGHLVFYTAEWIRGKPLSERIQAA GLRFGLAAMLLMMAVAFFNDINRLFG >gi|241318756|gb|ACQV01000030.1| GENE 18 20541 - 21722 1297 393 aa, chain - ## HITS:1 COG:NMA0083 KEGG:ns NR:ns ## COG: NMA0083 COG0743 # Protein_GI_number: 15793112 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Neisseria meningitidis Z2491 # 1 391 1 391 394 676 87.0 0 MIQQVLTILGSTGSIGESTLDVVSRHPEKFRVFALAGHRQVDKLVAQCKQFRPEYAVVGD AGHAAELEKKLKQEGIDTQVLYGSQALIDVASADEVSGVMCAIVGAAGLPSALAAAQKGK TIYLANKETLVVSGALFMETARQNSATVLPIDSEHNAIFQVLPRDYTGRLNEHGINSIIL TASGGPFLNTDLSTFDSITPEQAVKHPNWSMGRKISVDSASMMNKGLELIEAHWLFNCPP EKLEVVIHPQSVIHSMVRYRDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGELDFGALS ALTFQKPDFDRFPCLKLAYQAMNAGGAAPCVLNAANEVAVAAFLDKRIKFTDIAKVVAHC LAQNFSDGRHDIEGLLAQDAQTRRQAEAFIGKQ >gi|241318756|gb|ACQV01000030.1| GENE 19 21840 - 22589 857 249 aa, chain - ## HITS:1 COG:BBK13 KEGG:ns NR:ns ## COG: BBK13 COG2859 # Protein_GI_number: 11496780 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Borrelia burgdorferi # 29 246 33 235 238 74 26.0 2e-13 MSEQKQISSLSILGVLLALGLMAAAFILGVQFKNLRQPGTITVKGLAEKNFQSDSATWNT GVNAHGESYQEVLDLLTARRKKLSKFLGEQGFAAAEMKVGLPEVSRVFNETRDELGNVTR TPNGYDGDLNIVVNTKKLDKIQAAQRAILNFRAQNEFIRFDNPQYLLGNLETIKRDLITQ ATEDAQKRAAEFAKTGGGKVGAMRSASQGSFNIYADTGSSEDDEYGGSYDKSTVGKQVRL VVTIEYGIE >gi|241318756|gb|ACQV01000030.1| GENE 20 22623 - 23417 1177 264 aa, chain - ## HITS:1 COG:NMA0082 KEGG:ns NR:ns ## COG: NMA0082 COG0575 # Protein_GI_number: 15793111 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Neisseria meningitidis Z2491 # 1 261 1 261 265 367 81.0 1e-101 MLKQRILTALWLLPLMLGMLFYAPMWLWAAFCGLIAMLTLWEYARMSGLDKLKINHYLAS TLVFGVIAYAGGWQLPDLVWYVVLAFWLIVMPWWLKAKWKLNGGWQAYTVGWLLVMPFWF ALVYLRPQSEDALSLLAIMGLVWVADIGAYFCGKSFGKRKIAPTISPGKSWEGAIGGALC VAVYMTIVWKAGWLAFEAGWLKTIFIGLILTVVSVCGDLLESWLKRAAGIKDSSNLLPGH GGVFDRVDSLIAVISIYAAFVYLF >gi|241318756|gb|ACQV01000030.1| GENE 21 23423 - 24058 476 211 aa, chain - ## HITS:1 COG:NMA0081 KEGG:ns NR:ns ## COG: NMA0081 COG0020 # Protein_GI_number: 15793110 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 210 38 247 248 385 89.0 1e-107 MGHKRGLDALENMVKHCAELGVQYLTVFAFSTENWRRPEEEVSFLMGLFLQALQKQVRRL HDNNMRLRIIGSRERFNAEILKGIEAAEALTANNTGLTLSIAADYGGRWDILQAANQLIA EGVTEITEEALSRYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDTLWPDFNE KSLNEAIASFQKRERRFGRTSEQLPVEQQRG >gi|241318756|gb|ACQV01000030.1| GENE 22 24227 - 24784 821 185 aa, chain - ## HITS:1 COG:NMA0080 KEGG:ns NR:ns ## COG: NMA0080 COG0233 # Protein_GI_number: 15793109 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Neisseria meningitidis Z2491 # 1 185 1 185 185 300 96.0 7e-82 MINDIQKTAEGKMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLL DARTIGVKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGE AEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEE DLMAI >gi|241318756|gb|ACQV01000030.1| GENE 23 24989 - 25339 467 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255067163|ref|ZP_05319018.1| ## NR: gi|255067163|ref|ZP_05319018.1| transposase [Neisseria sicca ATCC 29256] # 1 116 251 366 366 229 95.0 5e-59 MSKYTLHFKYQAVLHYLHIRSQQRTADHYGISRTHLRRWIRAYQEGGIGALEHPQSKTMN QHRKNPFIADKPDHEKTQAELIEELCHMRAKVAYLKELKALSQKQTEKDKAKPSKH >gi|241318756|gb|ACQV01000030.1| GENE 24 25679 - 26140 418 153 aa, chain + ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 148 66 213 216 145 50.0 3e-35 MTELKGKDGKLYLSPILDLFNREIVAYAMSRNANSEMVKEMLEKAAPRLTDKGTMLHSDQ GVLYRTAEYRELLAQHSMIQSMSRKANCWDNAPMESFFAVLKTECFYNAGELTVDELMKQ IDDYMDYYNRERCSLKLKKLSPVAHRTQLTQSA >gi|241318756|gb|ACQV01000030.1| GENE 25 26225 - 27403 2163 392 aa, chain - ## HITS:1 COG:NMB0010 KEGG:ns NR:ns ## COG: NMB0010 COG0126 # Protein_GI_number: 15675958 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Neisseria meningitidis MC58 # 1 392 1 403 403 644 93.0 0 MAFLKLTEQNVQGKTVLIRADMNVPFKDGNISDDTRIRASLASIKYCLDNGASVIVMTHL GRPTEGEFHPEDDVAPVAAHLGKLLGKDVKVLNDWRENKPTLNAGDVVMLQNVRINKGEK KNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAPVACAGVLMAGELDALGKALK QPAHPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGIVNTFLLAEGKAIGKSLAEHDLV EESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAVVKDIADVAEDDMILDIGPKSAAAL AELLKAAGTVVWNGPVGVFEFDQFAGGTKVLAEAIAQSDAFSIAGGGDTLAAIAKFGVTD QISYISTGGGAFLEFLEGKELPAVAALEKRGA >gi|241318756|gb|ACQV01000030.1| GENE 26 27597 - 28946 1802 449 aa, chain + ## HITS:1 COG:RSc0387 KEGG:ns NR:ns ## COG: RSc0387 COG0612 # Protein_GI_number: 17545106 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Ralstonia solanacearum # 9 441 48 490 501 290 38.0 3e-78 MLRRIALMLTFALPAASWAQTLSETLPNGLKIIVKEDHRAPVAVSQIWYKIGSVDEKLGK SGLSHALEHMMFKGTKDVPSGEFNRRVSELGGQNNAYTSRNETVYYENVAAANLPEILKL EADRMHNLNFSDKEFLNEMNVIREERRQRTEDTADGKMWEQAYLAAFTQPSMRASVIGYM KDLHTLKADDLRAWYKQYYAPNNAVLVIVGDVDAKQTLQTAANLFGDIPAKAQPPRNKLH TEPYLRKPVTVKATSPVTHQPLIAINFRVPKLQKFDDAMPFALDVLSDILAGNASSRFDK NLVRGKQTALNAGTHYDIISREMPLFSVMAMPAEGVKTDTLIAQLRQEIKDIADNGVSEE ELQRVKTQAAVNEIYAKDSMSSQASMMGRLEARGFQYTDEQEIHRRLQAVSAQEVQAAAR MLTDERMSTVIIEPQKPAAAPSKKAAKRR >gi|241318756|gb|ACQV01000030.1| GENE 27 29005 - 30303 2258 432 aa, chain + ## HITS:1 COG:PA0371 KEGG:ns NR:ns ## COG: PA0371 COG0612 # Protein_GI_number: 15595568 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pseudomonas aeruginosa # 16 419 59 459 495 255 36.0 1e-67 MKPTLLALALLLPLSVQAATDIQRWRNRDGTQILLVERHENPIIDLEVSFKGAGSVANPD GKSQVAEFTAALLTDGTQELDEEAFNAEADNIGAHISSDSNAESASAGFRSLSKADIRDK AANLLNHSLTRPRFDEAVFRRRQIQSITGLQQQETTPDYTATRELTKLIYPNHPYGSGAN VTVDSLKRVSLDDIRAFHRTHYGKDNAIVAIVGDLNRKQAEQLVERVLKDLPAKATATHA IPPVPKQTAQRRDIPFAGTQAQVLLGTSLFKRHDPDYYALVAGNYILGGGGFDSRLMKVL RDQHGYTYGVYSSLAPATEEGTFTVSYSTQKKNTKASLADTQAVIEQFIAEGPTEAELKQ AKANIVGGFPLRYDSNDKLLNYLSLISLYDLPNDYLEAYPKAIDSLTVEQVRDAWQRRVK FKDLNTVVVGAE >gi|241318756|gb|ACQV01000030.1| GENE 28 30434 - 31816 747 460 aa, chain - ## HITS:1 COG:RSp0294 KEGG:ns NR:ns ## COG: RSp0294 COG2931 # Protein_GI_number: 17548515 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Ralstonia solanacearum # 42 240 36 210 589 99 33.0 1e-20 MSDNQKSLAVSDVTVDRILSQYLWNSPIPPKREDMGISITLANRTPVKIDATDYMKNGAG RYATAADFKMFENFFKASNLPARNTPYSFDEIGNKIYGIERFNSWKNGFYSTTPGKGFTV AISQYGIDTSSSDYVERAFIFGSTQVVVTPDDLRKLQFFVRPDGSREIRNLRITPKDDNF DFIGGSSSQDASGRMLKMMVDTANAGFKKVIDPKGIGRAVPLVYTDTDKLPFVNITDKDF KRLQSEKSNQEKPDILMEETGILLFRQGGGLFNKLKKSPALYDKSLLGRWRDIEQNANEK YQKTRDLIEKDPNMMSLDERDERDQYAADIDKPTALTIEDMPQNAQKIYHQGKQIFADFC AQKNIAYDVNSLDNIAMSLASVAYKNKMSGVSLININDNGKVSVGHRAPGLIMASVDMWE AAKTPVEESLSQIQQTAQQIEYEEQQKQIVQSQSHVARLS >gi|241318756|gb|ACQV01000030.1| GENE 29 31847 - 32704 375 285 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760608|ref|ZP_04758700.1| ## NR: gi|241760608|ref|ZP_04758700.1| hypothetical protein NEIFL0001_2267 [Neisseria flavescens SK114] # 1 285 1 285 285 561 100.0 1e-158 MNKTYKYLLAIAALTAAGFGIYQYTAPDKYQYWKELIAKDPKPDGVSEQEYREKLRAGYC WRDRKFYTSAELHRKAMVSFAGRLLGEAEAYKANMTTNQGGRDYSTGADCVRHEKACSVW FVPQDYTNEQWDRMFLAEKDPMDGALLAKYPKKEIRQENDLRNYLEQYDNKGFTLILRGS SKNGANVYGSDCCTVLSKKEAEPIIKKDALITYLEGAAIFPENDIPQNINIQNYGVGNFY FKFTGVDPGLHRWDVNKERTYQQYATEILFMNNCGDVLWQPFYVK >gi|241318756|gb|ACQV01000030.1| GENE 30 33019 - 33135 83 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSTEHHHNCSLRKVLNNLPDEKLFPPYSNRTNLELLP >gi|241318756|gb|ACQV01000030.1| GENE 31 33914 - 35752 2667 612 aa, chain - ## HITS:1 COG:NMA0276 KEGG:ns NR:ns ## COG: NMA0276 COG0449 # Protein_GI_number: 15793294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Neisseria meningitidis Z2491 # 1 612 1 612 612 1078 89.0 0 MCGIVGAIRANHNVVDFLTDGLKRLEYRGYDSSGIAVNADGKIKRVRRVGRVQLMEDAAC EKGVFGHIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGIIENFEAERERLQSLGYTF ESQTDTEVIAHSVNHEYTQNGGKLFEAVRAAIARFHGAYAIAVMAQDKPEEMVVARMGCP LLVALGDQETFIASDVSAVIAFTRRIAYLEDGDIAVLSANGIEKLIDKTGADTQRKVKVS ELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLDGGFEPENFGANAREVFDDIRSIKI LACGTSYYAALTSKYWLESIAKIPTDVEIASEYRYRDVIADPKQLVITISQSGETLDTME ALKYAQSLGHKHSLSICNVMESALPRESELVLYTRAGAEIGVASTKAFTTQLVVLFGLAV TLGKQRGFVSAEKAHEYVEELRQLPGSIQHALNLEPQIAAWAQKFAKKNSALFLGRGIHF PIALEGALKLKEITYIHAEAYPAGELKHGPLALVDENMPVVVIAPNDGLLDKVKANMQEV GARGGELFVFADLDSNFNATDGVHVIRAPRHVGVLSPIVHTIPVQLLSYHAALARGTDVD KPRNLAKSVTVE >gi|241318756|gb|ACQV01000030.1| GENE 32 35858 - 36991 348 377 aa, chain - ## HITS:1 COG:no KEGG:XCV0617 NR:ns ## KEGG: XCV0617 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 10 291 3 299 547 202 40.0 2e-50 MVDSTNQHKTLSKEDFQTIAYFAVGVSSESKSNAYRLVIAANTRDGKLYRIGNSGYSIGT IQTDLGQHPEVAKDLVGAYQKWTLEKKPDWRLSETQEKAIIHDLGRTGKEIIREDRRPLP SEFKSRLNQFLSSKDGITWVHTRDVNQINKIEQNIFIPLQETKLYQELSFDDKTHLVAVT SKLYNQSERWGRKVLQEVKDGKFHSVNEVDSRIDSFIKASGKKDYIETGRKEAVLGATLI SQLNIIEKDNSLFDKWNSVKTTPLDNPAKLEGNKKDNHNEIRNLFIDPEKSINKIKQRED KKVGTQFSYDDFSTLVNNLINDKDGSFTKQLLADNKDIVDAFDAKVQEKIKQEEQQTIAQ EAQREVVEKSFGSRSFS >gi|241318756|gb|ACQV01000030.1| GENE 33 37002 - 37403 107 133 aa, chain - ## HITS:1 COG:no KEGG:XCV0616 NR:ns ## KEGG: XCV0616 # Name: not_defined # Def: putative secreted protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 4 115 16 127 162 72 36.0 4e-12 MKKLIAIFLLIPLAAFSNARPLSFSGTWLYTDQVGDTVGGKELVLKQTGNLVTGIWNEGI STGSGGSGKLKGYVKGNKLFLNYCSDEGNNWYKSCPEYENDGSYFIKKNNKIIEYNITDN KLYKKGNEFILTK >gi|241318756|gb|ACQV01000030.1| GENE 34 37424 - 37906 154 160 aa, chain - ## HITS:1 COG:no KEGG:Smal_2437 NR:ns ## KEGG: Smal_2437 # Name: not_defined # Def: chitinase-like protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 2 83 119 200 335 92 48.0 5e-18 MATKELQIDLINKPELAATSEVAAKIAILYWEKRVPDSHKENVRQATKYINGGLNGLADR QNKYDEYYQKLTPEYLDKIQKGQQHSSNAQYNDFSALVSNLINDKIALFWFYSNALRSKK LDVDMITRINRADIVRCENELCARTSKAGENGYRVIQKRY >gi|241318756|gb|ACQV01000030.1| GENE 35 37980 - 38141 150 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298370536|ref|ZP_06981852.1| ## NR: gi|298370536|ref|ZP_06981852.1| chitinase, class I [Neisseria sp. oral taxon 014 str. F0314] # 1 51 45 95 281 84 94.0 1e-15 MEENLNYSAKRLAQLWPKRYADGNHNPNEKALNIANNPEKIANDVYSNTNGKW >gi|241318756|gb|ACQV01000030.1| GENE 36 38288 - 38578 127 96 aa, chain - ## HITS:1 COG:no KEGG:ECA2200 NR:ns ## KEGG: ECA2200 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 89 152 239 249 63 34.0 2e-09 MVLCKYCGGVSTGDPLVSVEAKRNVFEITQEGGSRERWTSVYRFQYSPKLSTWILRKARL NVYDTVTGKNEIKRKSINSSKPVKLQDFNYDEFFYN >gi|241318756|gb|ACQV01000030.1| GENE 37 38848 - 39372 352 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760642|ref|ZP_04758734.1| ## NR: gi|241760642|ref|ZP_04758734.1| hypothetical protein NEIFL0001_2274 [Neisseria flavescens SK114] # 1 174 1 174 174 294 100.0 2e-78 MEENTDIEQARSLVIETSRLMVAYRDNSEKLVNDVRNELDKSLIEQRRMLVQMIREEVTK EVSQAVYAYVKDMEKARNQMADQVREFNGYLRKVQEENNKISSRSVWVTSLTLATLVIGG IALIWFYSGVIQSKKIDADMVTRINQADIVRCGNDLCARTSKAGENGYRVIKKR >gi|241318756|gb|ACQV01000030.1| GENE 38 39420 - 40793 2321 457 aa, chain - ## HITS:1 COG:NMB0038 KEGG:ns NR:ns ## COG: NMB0038 COG1207 # Protein_GI_number: 15675978 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Neisseria meningitidis MC58 # 1 453 1 453 456 813 93.0 0 MAQTALNIVILAAGKGTRMYSKMPKVLHRIGGLPMVERVIDTAASLNPQNICVVIGHGKE QVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLYGDVPLIDTATLETLLEAA GSEVGLLTDVPADPTGLGRIIRDSQGSVTAIVEEKDANAAQKAVREINTGILVLPNAKLE NWLGSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLAELERIFQT EQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNVVLEGDIEIGDNVEIGANCVIKNA KIGANSKIAPFSHLEDCEVGQNNQIGPYARLRPKARLADDVHVGNFVEIKNASIGKGTKA NHLTYIGDAEVGSKTNFGAGTIIANYDGVNKYKTVIGDEVRIGSNCVLVAPVTLGNKVTT GAGSTITKNVEDNKLALARARQTVIEGWVRPEKGDKK >gi|241318756|gb|ACQV01000030.1| GENE 39 40892 - 41176 475 94 aa, chain - ## HITS:1 COG:no KEGG:NMC0016 NR:ns ## KEGG: NMC0016 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_FAM18 # Pathway: not_defined # 1 89 236 325 325 124 65.0 2e-27 MRKLALILTAAAVLAGCSWETYTNESGRTAVRQKYATGTPIVYQDGTYSKNMNYNQFRPE RRAVQSNQADHAEHGERGQHWQKPQFANQQPATE >gi|241318756|gb|ACQV01000030.1| GENE 40 41237 - 41884 646 215 aa, chain - ## HITS:1 COG:NMB0040 KEGG:ns NR:ns ## COG: NMB0040 COG1011 # Protein_GI_number: 15675980 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Neisseria meningitidis MC58 # 1 214 1 215 237 333 74.0 1e-91 MNHSPVWLFDLDNTLHNAEAGIFYIINRAMTEYMAGRLKLSEEAASHLRQDYWHRYGATL AGLQIHHPEVDIDEFLRESHPLKQILAKVEGMDGTDDVLGRLKGRKAVFSNGPSFYVRAL VEVLGLEAHFDGLFGTDDFGLLYKPNPQAYLNVCRLLGVKPEQCVMVDDSADNLHQAKAL GMKTVWYGEKAHPLPFADGIAKDMQGLLDFAQNLP >gi|241318756|gb|ACQV01000030.1| GENE 41 41949 - 42950 1604 333 aa, chain + ## HITS:1 COG:NMA0287 KEGG:ns NR:ns ## COG: NMA0287 COG4143 # Protein_GI_number: 15793304 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Neisseria meningitidis Z2491 # 1 333 1 333 333 499 78.0 1e-141 MKLKLSAVALLLASANLYAQTEVRLAVHKSFSLPQSVIAQFEKANDAKVSVIKAGSGNEM LNKLILSKANPIADAVYGLDNANIGKAKAAGILAANQPKSAPVTASLPDALAVDYAYVAI NYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPATSSPGLSFLLANIGGMGEEGAFKW WAQMRQNGVKVAKGWSEAYYTDFTQNGGSYPLVVSYATSPAAEVHYSKGKYSTPPTGNLF LKGSTFRQVEGAAVLKGAKQPELAAKLVSWLQSGEVQQALPAEMWVYPAAKNTPLPKVFE FAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR >gi|241318756|gb|ACQV01000030.1| GENE 42 43063 - 43908 1024 281 aa, chain + ## HITS:1 COG:NMB0042 KEGG:ns NR:ns ## COG: NMB0042 COG0668 # Protein_GI_number: 15675982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Neisseria meningitidis MC58 # 3 277 6 280 282 393 74.0 1e-109 MNFDLQVLSPFSGWEQLAQTGMSFGTNLLAALAIFFIGRWVATRVVTLMKAALTRAKVDK TLVSFLGNVANIGLLILIIIAALGKLGIPTTSVTALIGGAGLAVALSLKDQLSNFAAGAL IILFRPFKVGDFIRVNGFEGIVREIKMVQTSLSTPDNEEVVLPNSVVMTNSITNRSSLPL CRAQVVVGVDYACDLKAAKAAVLRAATEHPLCVQTKERPAVVYITNLAASAIEITLWAWT NEADLALFRFGLNEQVVENLREANINIPFPQCDVHLIQPKD >gi|241318756|gb|ACQV01000030.1| GENE 43 43984 - 44451 315 155 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 1 150 749 898 904 125 46 9e-28 MSHLQTIAEHLTSRRQTVTCAESCTGGLLAGALTSLSGSSQWFHQSFVTYSNQAKQERLG VMPDTLLKHGAVSRETVYEMARGAKAVAQADYALSISGIAGPSGGSAAKPVGTVWFGLAT PEGSFEQTALFTGDREAVRAQAVEYALAFLAEHLV >gi|241318756|gb|ACQV01000030.1| GENE 44 44534 - 45799 1670 421 aa, chain - ## HITS:1 COG:NMB0036 KEGG:ns NR:ns ## COG: NMB0036 COG2837 # Protein_GI_number: 15675976 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Neisseria meningitidis MC58 # 5 410 4 410 421 717 86.0 0 MSQNKQPAQPEKRTLFKTALAAGAIGVAGYFAGKKQGEAAAETQNNQHSELAYPCYGEHQ AGIVTPHQLFGIMCAFDVTAKDAKQLENLFRTLTARIEFLTQGGEYQDGDDKLPPAGSGI LGKQFRPDGLTVTVGVGSSLFDDRFGLKDKKPKHLQEMRDFPNDKLQKSWCDGDLSLQIC AFSPETCQAALRDIIKNTAQFAVIRWSIDGWLPKAEPGAIAARNLLGFRDGSGNPKVEDP KVADQVLWTGVAANSLDEPAWAKNGSYQAVRLIRHFVEFWDRTPMQEQTDIFGRRKYSGA PMDGKKEGDTADFAKDPDGKITPKDSHMRIANPRDPEFMKKHLLYRRAFNYSRGLAANGQ LDVGLIFICYQANLADGFIFVQNLLNGEPLEEYISPFGGGYFFVLPGVEKGSFLGKELLG V >gi|241318756|gb|ACQV01000030.1| GENE 45 45934 - 47100 2097 388 aa, chain - ## HITS:1 COG:NMB0035 KEGG:ns NR:ns ## COG: NMB0035 COG2822 # Protein_GI_number: 15675975 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Neisseria meningitidis MC58 # 1 388 1 388 388 616 88.0 1e-176 MKKFNLTALSVMLALGLTACQPPEAEKAAPAASGASAAANADGSVNIGVNDTACEPMELT VPSGQVVFNIKNDSGRKLEWEILKGVMVVDERENIAPGLSDKMTVTLLPGEYEMTCGLLT NPRGKLIVTDSGFKDTANEADLEKLAQPLADYKAYVQAEAKELVAKTKAFTEAVKAGDIE KAKSLFAATRVHYERIEPIAELFNELDPAIDAREDDFKDGANDAAFTGFHRIEHALWVKK DVSDVKEIADKLFKDVESLQKEIDALSFPPSKVVGGAAVLIEEVAGSKISGEEDRYSHTD LSDFQANVEGSKKIVDLFRPLIEAKDKALLEKTDANFKQVEDILAKYKKQDGFELYDKLS EEDRKALQAPINALAEDLAKLRGILGLK >gi|241318756|gb|ACQV01000030.1| GENE 46 47113 - 47937 1040 274 aa, chain - ## HITS:1 COG:NMA0280 KEGG:ns NR:ns ## COG: NMA0280 COG0672 # Protein_GI_number: 15793297 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Neisseria meningitidis Z2491 # 1 274 1 274 279 425 86.0 1e-119 MLIALLIMLREGIEAALIVGIVASFLKQSGHSELMPKVWLGVFLAAAMCLGIGYGIHSVT GEIPQKEQELVVGVIGLVAVAMLTYMILWMKKAARSMKQHLQDSVQTALNHGSGQGWALV GMAFLAVAREGLESVFFLLAVFQQSPTWSMPIGAVLGLLAAVVIGTLIYQGGMRLNLAKF FRWTGAFLIVVAAGLLAGSFRALHEAGVWNAMQDIAFDTSKYLHEDSPLGVLLGGFFGYT DHPTEGEVLIWLLYLVPVMIWFLRGSAPAKTLTK >gi|241318756|gb|ACQV01000030.1| GENE 47 48318 - 49493 1616 391 aa, chain + ## HITS:1 COG:aq_136 KEGG:ns NR:ns ## COG: aq_136 COG1858 # Protein_GI_number: 15605716 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Aquifex aeolicus # 63 389 22 354 355 372 55.0 1e-103 MPRLKLHQIVLALAVSAALTACGEKTAQTTETPQAASAASAADAAASTAAVSAPQNSANV SDEDKALLERAQATFKPLPDAAEMQKVRPFTEEQVKLGQQLWYENRLSKGNTVSCNSCHN LATAGVDNMPTSAGHKSQFGGRNSPTALNAALLGSQFWDGRAADVEEQAGGPLLNPVEMA NATEADAAAKIAGIPEYQEKFKAAFPEDGAVSFKNITTALGAFERTLLTPTRWDDYLKGN VSALSEQERKGVRAFMDNGCIACHSGVNLGGTMFQKFGLVDGPYWKHIDDPKHDKGRADV TKKAEDEFFFRVPGLRNVERTYPYFHNGSVWELDKAVNIMAKAQLGKTLAPEETENIVAF LKALSGNVPESARTMPELPVSTDVKSRPDNK >gi|241318756|gb|ACQV01000030.1| GENE 48 49636 - 49962 777 108 aa, chain + ## HITS:1 COG:NMA0273 KEGG:ns NR:ns ## COG: NMA0273 COG0545 # Protein_GI_number: 15793291 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis Z2491 # 2 108 3 109 109 187 97.0 3e-48 MSLIIEDLQEGHGKEAVKGKEITVHYTGWLEDGTKFDSSLDRRQPLTITLGVGQVIKGWD EGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEVELLKVYE >gi|241318756|gb|ACQV01000030.1| GENE 49 50089 - 50337 518 82 aa, chain + ## HITS:1 COG:NMA0256 KEGG:ns NR:ns ## COG: NMA0256 COG5007 # Protein_GI_number: 15793274 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Neisseria meningitidis Z2491 # 1 80 1 80 82 131 90.0 4e-31 MLLPEQVKTLIEGVTPCEHVEVEGDGHHFFAVIVSSSFEGKARLARHRLIKDGLKPQLES NELHALSISVAATPAEWAAKQA >gi|241318756|gb|ACQV01000030.1| GENE 50 50483 - 51277 1047 264 aa, chain - ## HITS:1 COG:NMB0271 KEGG:ns NR:ns ## COG: NMB0271 COG0500 # Protein_GI_number: 15676195 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 262 1 262 262 382 71.0 1e-106 MNPQDKRWQIHRHLAQDTDERLQLVRNAPKRIMLIGADADISRSLLAARYPDAVFEEYDP NADFLKTAAAARKGGFWQKLTGKTIPQHCQALTAPLPEASANMLWANLSLSRADDILPVL KNWAAALKTDGLLFFTHFGRDSLSELTGRLNHEGIKCEAPTLIDMHDLGDMLADNGFYDP VTDTAKLELSYKKAGTFWQDMETLGLWNALKFSNPQAAKECVDQIFANEGRLNITLETVY GHAVKKLVLPQGENVVQFFPKRQG >gi|241318756|gb|ACQV01000030.1| GENE 51 51362 - 51799 250 145 aa, chain - ## HITS:1 COG:MTH287 KEGG:ns NR:ns ## COG: MTH287 COG0602 # Protein_GI_number: 15678315 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Methanothermobacter thermautotrophicus # 19 112 101 193 237 75 40.0 2e-14 MRSNEIIQLLKNATEKYPLEGLTFLGGEPFLQAEGLADIAEAAHNLNLSVMVFSGYEYTE LSENKFSGSKRLLNSTDLLIDGEFDNTQIETTRNWVGSTNQKFHYLTNRYSDEIETQELS VTNEWRVDSCNNIQSNGLPIKFYPY >gi|241318756|gb|ACQV01000030.1| GENE 52 51946 - 53781 505 611 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 209 582 417 787 815 199 35 9e-50 MNEYINTWLENFERQSMIRRALIISGNIIDLGFNRYNKLMPINRIIEESLKAQGFEQVVF YSRLNGISGVSSQEWDGLNQLGMQAEVGEAYDFDDDGEDNQAISGCIPIQPQDFFATVEQ VMTKTQKKAAFIVDWSNYLFGQINALSETERAWLQQIATGLRDAEQTTTAEAMGQPQSLL VFLCSGNTALPPSVYLNNPLFAEITIPLPNISEREAAILARQTQWKVSDNLSAGSQSLAD FVTLTDTLTLRDIDNLVRLSRQQQAPINIQNLVSLYRYGKRQSPWEKLNYQRLKDAQITL QRRVKGQESAIGAVNKILIRAYTGLSGLQHSVKARMPKGSLFFVGPTGVGKTELAKSLAQ FLFGDEDACIRFDMSEFNHEHADQRLVGAPPGYVGFEEGGQLTNAVKTRPFSLLLFDEIE KAHPRILDKFLQILEDGRLTDGKGETISFADTFIVFTSNIGATNIRPDEDNKENIAEQFK QAVQSHFRDELNRPELLGRIGDANIIPFNFIQDNAVLKDIARAKLKPLPGRLKEKWGLEK LVFENENKALDALIKQVNYQHGGRGVLNVLTKYLFDPLAEFLFEQVEQPHKLKGRTLKVL QAGKYFDFELE >gi|241318756|gb|ACQV01000030.1| GENE 53 53792 - 54898 1051 368 aa, chain - ## HITS:1 COG:no KEGG:Pnap_4604 NR:ns ## KEGG: Pnap_4604 # Name: not_defined # Def: hypothetical protein # Organism: P.naphthalenivorans # Pathway: not_defined # 1 357 1 355 367 127 29.0 7e-28 MSQISENRWQLEREREIREAARKAREAEISQTTEIYLRRYEQQLNDLENSDLAEFALQNI ATIRTEIQRVRHMNAYDGRNRSFAIGQLVQAIRYEAQENKRVAEEHQRLLREEAERAAER LRAEIKNVWIQETSNWENKQARNLAFKPLAILRKRITEENLSIADIKSAIREIKQSAEQQ AEEIRKNFAKTVQDEVAQTQKSDLLRFIETANLPQSESERLKQKIEQENQKDLTEIIQEA HRIEDTVIENEAVRKEMVKAVYQSLKQAGFTVLTPIKQGVGEDSVVVIQASRPQGNRAKF RVRLDGAVHYEFDNYKGQHCKEDMQKVLPKLSEVYGVNLSDERVLWENPDDEHADAKPIN PTHTAKSH >gi|241318756|gb|ACQV01000030.1| GENE 54 54939 - 55436 476 165 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760628|ref|ZP_04758720.1| ## NR: gi|241760628|ref|ZP_04758720.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 165 1 165 165 187 100.0 1e-46 MAKKNNNNQKQQNQIDGQAKPAVEKSPARLALEKQRDELNAQILQVQNQKARLEKEKRDL DLKRQQAEKEKIQAEKSVERLEREAAEIRAAIRKIEELKLAQHTESAEPEILALMGTKAD GQNRNGQNDQTILAVAARYKLNDVVLYTEDKNLKNHATAVGIKTI >gi|241318756|gb|ACQV01000030.1| GENE 55 55429 - 57441 1242 670 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760686|ref|ZP_04758778.1| ## NR: gi|241760686|ref|ZP_04758778.1| hypothetical protein NEIFL0001_2293 [Neisseria flavescens SK114] # 1 670 1 670 670 1275 100.0 0 MDKLLAKKTFSYPIYRVDTEYRYRKIGTPTVFTELLMGLAHNDFPQLADNNLAQIAHKLK LDFTFIRYTLENLNDTGLIEHIDLPDKKDDLDKLSLRDLRLTDNGKKFYHEKKMPGRRRT ENAEFWFNPLLNEYVSKPKQSASNVEDVVELNCSLFPVDEALLQQLSGLESTNQKWFDAE TELEHDGISITCDEDTSLPQTVPVKLTLDGNHYLNIDSSDKLFSHWINTRKPQVIKEVLL EPMIFDAEDAIEWDVDLDLPENGLLSLVLADQESDTRQIGNTVEVKFNGNHDELDDKTPL IVFSNIAEAELHGKHLFIPALLKDSDGLTRIFFRFSDNTLFVEETGYLECYFDHQPYPLP AKILYQESENWLADLPALSQPNMAVLAFMANFVPAADILKKLPEMTITQASDFAELIKKT WNKPFKPEGWAEMIKPLNNEDDLRQFTEYFPKVELGLARLSAEAQRQAFDWAVNNEKSTA RKIPELSDLLAQHKALGRLKPDELKLKDIKQNSLEQIGQWQKNVEAINRTFPAISASNDI AKLSEQLKQWQSAVFQYFEPMDVTQKFVVLDTNFVRKCPSSLSAIQTEGTVILPQTVLNE LDYQKEKFKRDLATAKQALVEKTEQCEAIVSVDIDAQIADCDARLGRLKAELDAVRTQLT QLNDKERPNG >gi|241318756|gb|ACQV01000030.1| GENE 56 57441 - 61361 2081 1306 aa, chain - ## HITS:1 COG:MTH1634 KEGG:ns NR:ns ## COG: MTH1634 COG1112 # Protein_GI_number: 15679629 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Methanothermobacter thermautotrophicus # 950 1248 363 609 642 96 29.0 3e-19 MTGKTVYFRLPETEQKHKNSVTQEMLGKSISRAFRSYKAQFPQYASKEYETVAKQFCEDF FLADEAIIANFANLSLQDNSEKKISLSIRISSHPVFNQHIPHNIAVAVIGYCPTATVSPV FIPERVFLTHGGMDATAYEKQVETHFYQLQENSYPPRSQPNLLSSDFTKSLPAYAAKTKE RLSGWLDFLTFKNKLIKHKTQGLRYLNWQFNEETGQVHFLVIAEDEQVLKKTRAAFSRQS LHTFKTEVSTEPFRFILPKKDTTLVDSAFSQLGQLANQGIKIIQKNNSDKEKLTFCEDFR RESQKKADKNNTFDFSKAVFADVFVDISEELSNHIAKFEDDDNREEGKTRQKKINSLFKN MPESGFISISLVGDLALIERHRRAVKNLQQNEGCYAPYLSSYLFDIENANRPNEIPEITE WENKNLNDKQKSAIQKMLAAPDICLIQGPPGTGKTTVIAEACLQFAKRGETVLLASQAHD ALDNALSRLQNHPELRAVRLAKSANRITEEGKQFTGESILSKHYVSLRNYVAKEYLQPFN ALSEETEKLREWVKQAEFVAHDLQQLREEYRTNQGRLKQAEQALAQAQTEFATQQDAFKQ QSRDVESITQLIGLLKGEDSGEALRHSDFALSETFHPLVEHIITEFNHLKINQPFSYERF LVESENQTAILYALIQRYRRIQAVLPKMEADLARLNSSNGAMGADTKTLLEIERLQQEID EIADKMENDDSDELSTQWKEKRKALRLLKEKPSEGLNSDTYQIFDDAERFTQNNPEAVRP LLMQRIQKLKWFQQQYQSLALATVWDLNNQLQGYDLQLPSDESVREKQADLEALKEDKHQ ITERGRLKKQQAAQILTDGGFSAEADFLKEFAEQQNRLNELENNLQDLQTKNRDFMPLFT RWQEILKEPEKSAEKDWSELEKPFVGSCNLVAITCNENERTLTDNNFDGFDVVIIDEVSK ATPLEMLLPLMRAKKAILVGDHRQLPPIFNEADGLTFEDEVEQNEAQENKQDSDTDLTED NLHKFEKMVTASLFKELFEKAPESLRERLNIQFRMHPDIMKMINYFYERQLTCGNPDAKR PHGIEFKGLLSQKDHVLWIDTTDDEKGKRFSINDGQSNINVLEARMIAKTLVDMNRQLET LGYGKDNKMKVGVVSFYQPQCRVIRDEIRKINKDKLSFSAIDVEINTVIRYQGKEKPIIL LSLVKNNGGDRTQKFRAGRANIARFEFINVAMSRAQNLLLIFGARNMLENREVKLPRMDK AGYDKEMVYKNMFKYLEHWAETGGICDAKEFSAILPNIQPQQKGRR >gi|241318756|gb|ACQV01000030.1| GENE 57 61453 - 62199 875 248 aa, chain - ## HITS:1 COG:NMA2216 KEGG:ns NR:ns ## COG: NMA2216 COG0596 # Protein_GI_number: 15795085 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Neisseria meningitidis Z2491 # 1 248 10 257 312 365 75.0 1e-101 MPHSAKKVYLIHGWAANRHVFDDLIPRLPADWDVRALDLPGHGDAPFAEPFDIAAVAETF AGQIDTPAHILGWSLGGLVALYLTALYPDKIQSLCLTASFARLTADMDYPEGLVQPALGK MVGAFQQDYAKHIKQFLQLQLLHTPNSGEILNRVLPDLARCGTPSALQAALEAVNHADAR PLLPLIQTPSLLVFGQKDAITPPRMGEYLHRHLSDSELVLIDKAAHAPFLSHADEFAEIY RGFVEKVV >gi|241318756|gb|ACQV01000030.1| GENE 58 62417 - 62914 319 165 aa, chain + ## HITS:1 COG:NMA2217 KEGG:ns NR:ns ## COG: NMA2217 COG1040 # Protein_GI_number: 15795086 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 1 165 77 241 241 255 73.0 3e-68 MWASLYYEPPVSSMIRELKHLADLGMSRPLADLMCQNAPDWLATEHFDFVLPMPLSKERR LKRGFNQSEALTDILAKRYGWTLLPRHAVFRRHGKPQSTLKSDERLRNIKNAFEIKAELP KACNILLIDDVFTTGSTLNELAKTLKKSGAGKIFCWSLARPPMKK >gi|241318756|gb|ACQV01000030.1| GENE 59 62979 - 63443 598 154 aa, chain + ## HITS:1 COG:NMB0268 KEGG:ns NR:ns ## COG: NMB0268 COG0219 # Protein_GI_number: 15676192 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Neisseria meningitidis MC58 # 1 154 1 154 154 292 89.0 2e-79 MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSSKMKRAGLDYHEFAKLTVH ENFEDCLKALEGRRIFALTTKGSTRPDEVSFRKGDVLLFGPETRGLPAEVLDSLPAGQKI RLPMMPDSRSMNLSNTVAVILFEAWRQNGFAGGV >gi|241318756|gb|ACQV01000030.1| GENE 60 63492 - 64211 313 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) [Campylobacter curvus 525.92] # 29 223 29 212 270 125 36 2e-27 MTFTKKTLLSLAAATIGVLSINAAVADSVVRVEKLHPSANRSYKVAGKRYTPLTKVSSFS QTGKASWYGNQFHGRKTSSGERYNMNALSAAHKTLPIPSYARVTNMQNGKSVIVRVNDRG PFHGNRVIDVSKAAAQQLGFINQGSANVKVEQIIPGQTAAQTIISPNNKEFFVDLKSFGT QREAQAYLNQAAQSLPSDSKIMLEKRNYEYVVKMGPFSSQERAAEAGERARHLNLASAI >gi|241318756|gb|ACQV01000030.1| GENE 61 64310 - 64894 1014 194 aa, chain + ## HITS:1 COG:NMB0265 KEGG:ns NR:ns ## COG: NMB0265 COG0632 # Protein_GI_number: 15676189 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Neisseria meningitidis MC58 # 1 194 1 194 194 310 84.0 9e-85 MISRLTGKLIEKNPPQVVIDVNGVGYEADVSMQTFYNLPSVGEAVHLYTQLVVREDAHLL FGFASAEERATFRQLVKVSGIGAKTALGILSAMNADELAQAIAEEDVKRLSSAPGIGKKT AERMVLELRGKLVSHTVSDGLFAPDAVADESQDIINTLLALGYNEREAKAAAKGIPKGTE VGEGVRLALKNLLK >gi|241318756|gb|ACQV01000030.1| GENE 62 64908 - 65141 406 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760659|ref|ZP_04758751.1| ## NR: gi|241760659|ref|ZP_04758751.1| putative lipoprotein [Neisseria flavescens SK114] # 1 77 1 77 77 124 100.0 2e-27 MKALALSITLLLSACVYTETPYGRTAVLDLPVHSQTAVNKTVTINAPPGTTVIYQDSQPV HNHPAYPVYPRRVYHYR >gi|241318756|gb|ACQV01000030.1| GENE 63 65196 - 65903 978 235 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760591|ref|ZP_04758683.1| ## NR: gi|241760591|ref|ZP_04758683.1| hypothetical protein NEIFL0001_2301 [Neisseria flavescens SK114] # 1 235 1 235 235 422 100.0 1e-116 MKYILPLLLFLSACTPDTKTTDAASSPKTHGFAHRLTEGEKLLTQALIKQDLAAYFKHET GGAFAEQAPLFSAQQLAEQKNIPKNDAIGVYGKIIKAQGRTAWLQTNKQTLKLDLAEPLQ EAQGEVTLVCQHENTAFQDCQTEENFARRFTEQIFSAVESGRVSAQTDAPAEEIMAGRLI PFLSAASDFTGNFKACATTMTEYCTSRLAREMPESAVRKKAQELGLTEIAFKKKK >gi|241318756|gb|ACQV01000030.1| GENE 64 66173 - 66355 75 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254673934|emb|CBA09718.1| ## NR: gi|254673934|emb|CBA09718.1| hypothetical protein [Neisseria meningitidis serogroup W135] # 14 60 5 51 96 72 76.0 6e-12 MRQVLKTYRGMGTYSSDGKPGSVTDSHSSRHIIAGVLKQPTRTLGEQRHRVLFGLAPNGV >gi|241318756|gb|ACQV01000030.1| GENE 65 66427 - 67749 1575 440 aa, chain - ## HITS:1 COG:NMB0033 KEGG:ns NR:ns ## COG: NMB0033 COG2821 # Protein_GI_number: 15675973 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Neisseria meningitidis MC58 # 1 440 1 441 441 722 82.0 0 MKKHLYRITLVSIAAAILAACPSKSIKNLPETDTSVIKGPDRPAGTPDPIGTTVSGGGAN YTVVSYNELPHWNTQHFAQSLQSFRLGCEKLKNRQGWQDVCIQAMQTPAHHFQAKHFFER YFTAWRVDNGGNPAGTITGYYEPVLHGDDKSTSQSRFPIYGIPNDFVSVPLAANLRGSKA TVRIRQTGPNSGVIDNSGTYTADLSRFPITARSTALKGRFEGSRFVPYHTRSQINGGALN GKAPILGYADDPVELFFMHIQGSGRLKTPSGKYIRVGFADKNEHPYVSIGRYMADKGYLP LGQTSMQGIKAYMKQNPGRLAEVLGQNPSYVFFRELTGSSDSGPVGALGTPLMGEYAGAI DRHYITLGAPLFVATAHPITKKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGEVAGKM KTTGYVWQLLPNGMKPEYRP >gi|241318756|gb|ACQV01000030.1| GENE 66 67839 - 68411 487 190 aa, chain - ## HITS:1 COG:NMB2078 KEGG:ns NR:ns ## COG: NMB2078 COG1714 # Protein_GI_number: 15677899 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Neisseria meningitidis MC58 # 15 187 20 192 193 159 51.0 3e-39 MSEINLSNLPKTEIVDVHIASPGARVTAYLLNNLFNVLIWVPFIVMVVFTFDESEELVSE SSLSNTPDYAVITFFISLAVYLVFGIFQLYYMSRDGQSLGKKIMGIRVLKSDGSNPGFGG TVLIREVAWAFIVGIIIIAVMLAVNETGGDLVSLLMTFINFIMLFSVKRDRRTLYDMLAD TVVVKLPPRR >gi|241318756|gb|ACQV01000030.1| GENE 67 68655 - 69770 1925 371 aa, chain + ## HITS:1 COG:NMA0351 KEGG:ns NR:ns ## COG: NMA0351 COG0136 # Protein_GI_number: 15793362 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 371 1 371 371 739 98.0 0 MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDV AELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLRMKDDAIIVLDPVNRNVID NGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMG AIHTQVADELADPSSAILDIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSK EEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQAITLKLKKNLPVSEIEAILAGAN DWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLEMGGEYISAFTVGDQLLWGAAEPL RRVLRIILGSL >gi|241318756|gb|ACQV01000030.1| GENE 68 69860 - 70657 1222 265 aa, chain - ## HITS:1 COG:no KEGG:D11S_2007 NR:ns ## KEGG: D11S_2007 # Name: not_defined # Def: lipoprotein GNA1870 # Organism: A.actinomycetemcomitans # Pathway: not_defined # 4 265 5 263 263 232 51.0 1e-59 MRTFHVSALTASLSLMLAACGGATSGLSNAVTEPLNPHPKGVLSIELNESVPENGTLELT ANGKTQTLKKGGKLDTGFLKTDKVSSYDYAQKIKVKGQVITLETGDFQVYKQNYSTVAAR YAKQKADDAGKLQNLDTYTFTVGEVQGDETAYRNLPKQGSYQYSGIAFNGDDRSGRLKYT VDFDKKQGYGKISSMASHNNVDLLAAGIANNNGKAAISGKTSLNGVENGRYDLKLFGPQA EEIAGKAQIKVGDSTKEIGLAGKKE >gi|241318756|gb|ACQV01000030.1| GENE 69 70854 - 71336 681 160 aa, chain + ## HITS:1 COG:NMB0308 KEGG:ns NR:ns ## COG: NMB0308 COG0262 # Protein_GI_number: 15676226 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Neisseria meningitidis MC58 # 1 159 1 161 162 208 71.0 3e-54 MPKITLIAAYATRRCIGINNTMPWHLPEDFAFFKSYTTGKPVIMGRKTWESLPRKPLPGR QNIVITRQDYQAEGAQTAASLEDALALCQGVEEVIIMGGAQIYAQALPIATDLRLTEVGL DVDGDAFFPEFSTETWQEASRENHVSAKGIEYAFVHYVKA >gi|241318756|gb|ACQV01000030.1| GENE 70 71420 - 71686 450 88 aa, chain - ## HITS:1 COG:no KEGG:Tmz1t_2017 NR:ns ## KEGG: Tmz1t_2017 # Name: not_defined # Def: hypothetical protein # Organism: Thauera # Pathway: not_defined # 1 54 1 54 70 85 75.0 5e-16 MAKKFPIFPKNPERICWGCDKYCKEDDLQCGNGCERIQHPIELDGRDWYKKGDWSNLLSE EQQIELGLKEAPKPAKPHIKLPLKNKTA >gi|241318756|gb|ACQV01000030.1| GENE 71 71854 - 72309 335 151 aa, chain + ## HITS:1 COG:NMA0248 KEGG:ns NR:ns ## COG: NMA0248 COG0454 # Protein_GI_number: 15793266 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 3 151 12 160 163 202 61.0 2e-52 MNICRLKPEFVEPLALALFEEWHDFAPWSSLDKIRAYYAQCLNGDDLPLAFAAVDNEGRL MGSAALKRFDMACFPEYEYWLGDVFILPQFRGLGVGRQLVSFCLDKAHELGLPHLFLYTP DVQAVYEKFGWKEITQTWHNGETVSVMKLDL >gi|241318756|gb|ACQV01000030.1| GENE 72 72380 - 74530 2261 716 aa, chain - ## HITS:1 COG:NMB0287 KEGG:ns NR:ns ## COG: NMB0287 COG1199 # Protein_GI_number: 15676210 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Neisseria meningitidis MC58 # 1 716 1 716 716 1361 94.0 0 MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAIANAFSRTLTREEGEEAPKREGES IAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQEQLVDRDLPFLVEKSGLEL TFALAKGRGRYLCPYKLYQLTQNNAQQNLLGFEAPEVLWDSKPKPEELNLLRDIADEFSA HRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKAACPNRPECPFYLARDVLETVDVVVANHD LLLADISMGGGVILPAPENSFYCIDEAHHLPKKALSRFAAEHSWNIAVWTLEKLPQLTGK IAALTDKAELANLADEAAISLLDSLHEWQFHLAEEPSLSLGSSENDRRKHNEPTWLWEDG KIPEGLETTVSNTAIAARSLLKHVVGLNDALSAARREKEQDGALIDRLTSEFGLFIARIE QISAVWDLLSTVPIEGEEPLAKWIIRRADDKNDYIFNASPISSASHLANSLWRRAAGAVL TSATLQSLGSFNLILRQTGLLWLPETTTLALESPFNFDTQGELYIPPVHASPKDPDAHTA AIVEWLPKLVSPVEAIGTLVLFSSRKQMQDVALRLPDEYLPLLLVQGELPKAVLLQRHHQ AIAEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPF IEITVPEASIKLIQAVGRLIRTEQDYGRVTILDNRIKTQRYGQQLLACLPPFKRIG >gi|241318756|gb|ACQV01000030.1| GENE 73 74695 - 74931 387 78 aa, chain - ## HITS:1 COG:NMB0028 KEGG:ns NR:ns ## COG: NMB0028 COG3205 # Protein_GI_number: 15675968 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 7 77 1 71 72 105 76.0 2e-23 MYQENSMIKTITFAILHFSVAFSVAYILTGSIGVSSAVALVEPIVNTVVFYFHEKAWNRY EKNKSDKQKLWVPLHQCG >gi|241318756|gb|ACQV01000030.1| GENE 74 75042 - 75992 1292 316 aa, chain + ## HITS:1 COG:NMA0274 KEGG:ns NR:ns ## COG: NMA0274 COG1052 # Protein_GI_number: 15793292 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Neisseria meningitidis Z2491 # 1 316 6 321 322 477 75.0 1e-134 MNPLHIVVLDRDTLVNRPFDFDFPHTLSSYGTTEAHETPERIRGADIVITNKVVISAQAF AENPQLKLVAVTATGVNNVDVEAAKQNGTAVCNIRAYGNESVAEHAFMMMITLMRNLPAY QRDVAAGLWENSPFFCHLGAPMRDLNGKTLAIFGRGNIGKTLATYAQAFKMNVVFAEHKN AQSVRDGYVSFDEAIRSADVVSLNCPLTPQTANMIGEAELQQMKSGAILINCGRGGLVDE AALVAALKYGQIGGAGFDVLTQEPPRDGNPLLKARLPNLIVTPHIAWASQEAANRLFDIL LDNINRFVAGNPQNLV >gi|241318756|gb|ACQV01000030.1| GENE 75 76250 - 77698 2287 482 aa, chain - ## HITS:1 COG:NMB0015 KEGG:ns NR:ns ## COG: NMB0015 COG0362 # Protein_GI_number: 15675963 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 482 1 482 482 923 90.0 0 MKGDIGVIGLAVMGQNLILNMNDRGFKVVAYNRTTAKVDDFLNGAAKGTNIIGAYSLQDL VDKLEKPRKIMMMVRAGSVVDDFIEQLVPLLEQGDIIIDGGNANYPDSTRRTHELAAKGI RFIGAGVSGGEEGARHGPSIMPGGDEAAWPAVKPIFQAIAAKTPQGEPCCDWVGRDGAGH FVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRIFSEWNQTELDSYLIEITAAILG YKDENGEPLVEKILDTAGQKGTGKWTGINALDLGIPLTLISEAVFARCVSAFKDQRVQTS RLFGKTVTPVDGDKAAWVEALRQALLASKIISYAQGFMLIREASENNDWALNYGNTALLW REGCIIRSAFLGNIRDAYEANPDLVFLGSDPYFKGVLENCLPAWRKVVAKAIECGIPMPC MASAITFLDGYTTERLPANLLQAQRDYFGAHTYERTDKPRGEFFHTNWTGKGGDTASTTY DI >gi|241318756|gb|ACQV01000030.1| GENE 76 78181 - 79950 1697 589 aa, chain + ## HITS:1 COG:NMB1057 KEGG:ns NR:ns ## COG: NMB1057 COG0405 # Protein_GI_number: 15676942 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Neisseria meningitidis MC58 # 29 589 48 606 606 718 64.0 0 MKFSFGLNLLAVLVLAACAHQPMQKPDAAPVPTAVDNHAPEQGTGLTEQKLIRAKHYMAA SANPLATEAGYEVLKRGGSAIDVMIAMQTTLGLTEPQSSGLGGGAFLVYWDNKAKKLTTF DARETAPKAATPELFLDENGKPMGFMNAVVGGRSVGVPGIPKLLEDVHKRYGKLPWASLF DKPIALAEQGFTVSPRMAKSIEQNLEPLQRYPQTAAYFLPDGKPLAAGTVLKNPEFARSV RLLAEKGSAPFYQGMQAQNIVRAVTGAVDNPGKISMVDLKNYQVIERKPVCAPYREYEVC GIGAPSSGAIALGEILGVLQNQDMKALGAENIHSWRWIGDASRIAFADRDYYVGDPAFVN VPTRAMISQAYLKPRAEEIRKADKALETIQAGKFDKEYAQGMAVELPSTSHLVVVDKDGN VVSMTTSIENAFGSGLMANGYLLNNELTDFAFNPVGADGKTVANSVAGGKRPRSSMAPTI VMKGGKPYMAVGSPGGSRIIGFVAKTLVAHIDWGMDIQTAISLPNMLNRGSQYEIEEKTA AADKAAALEKLGYKVQIRDLNSGVQGIVIGKDGLLGGADPRREGKVMGD >gi|241318756|gb|ACQV01000030.1| GENE 77 80188 - 81102 1156 304 aa, chain - ## HITS:1 COG:NMA0263 KEGG:ns NR:ns ## COG: NMA0263 COG0774 # Protein_GI_number: 15793281 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Neisseria meningitidis Z2491 # 1 301 1 301 307 552 93.0 1e-157 MLQRTLAKSVSVTGVGLHSGERVALTLHPAEENSGISFRRTDLSGEMGEVIKLNPYLIND TRLSSTIVTDKGVRIGTIEHIMSALSAYGIDNALIELNAPEIPIMDGSSLPFIYLLQDAG VIDQKAQKRFLKILKPIEIKETGKWVRFTPYNGFKVTLTIEFDHPVFNRSAPTFEIDFAG KSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIVIDDMDVLNPEGLRYPDEFVRHK ILDAIGDLYIVGHPIIGAFEGYKSGHAINNALLRAVLANESAYEWVEFADDEDLPSAFHE LPAA >gi|241318756|gb|ACQV01000030.1| GENE 78 81753 - 82757 1634 334 aa, chain + ## HITS:1 COG:NMA0246 KEGG:ns NR:ns ## COG: NMA0246 COG0057 # Protein_GI_number: 15793264 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 334 1 334 334 625 94.0 1e-179 MSIKVAINGFGRIGRLALRQIEKAQGIEVVAVNDLTPADMLLHLFKYDSTQGRFEGSAEL KDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTSKTKAEAHIRAGARKVVIS APGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMAAVLQKEFGIVEGLMTTIHAY TGDQNTLDAPHRKGDFRRARAAALNIVPNSTGAAKAIGLVIPELNGKLDGSAQRVPVATG SLTELVSILERPVTKEEINAAMKAAANDALGYTEDQIVSSDVIGIEYGSLFDATQTRVMT VGDKQLVKTVAWYDNEMSYTCQLVRTLEFFASKI >gi|241318756|gb|ACQV01000030.1| GENE 79 82853 - 83527 519 224 aa, chain - ## HITS:1 COG:NMA0245 KEGG:ns NR:ns ## COG: NMA0245 COG1720 # Protein_GI_number: 15793263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 222 1 222 226 389 84.0 1e-108 MSYSITPIATVHSPYKQKFGIARQPGLVPAAEICIELTPEFTADSVRGLEDFDYVWISFI FHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSLLKLERIETGKPVRIYCSG ADLLDGTPVVDIKPYIPFIESKPDASSGFVSGKPEELNVVWAESTLANHLSTEEKHLIEQ SIAQDPRPAYQDIPERIYVMNIADYEVQFRIENKCATVIKLSTI >gi|241318756|gb|ACQV01000030.1| GENE 80 83698 - 84333 603 211 aa, chain + ## HITS:1 COG:NMA0244 KEGG:ns NR:ns ## COG: NMA0244 COG1335 # Protein_GI_number: 15793262 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Neisseria meningitidis Z2491 # 1 211 1 211 211 397 89.0 1e-111 MIVSIDVDAQKTFTPLCPKELPVAEGHLIADELNAQAVLADLRVMTKDAHHVAAKWLVDN PVDMLKPTGLPDADLTWVSHAMVGTYGYELLDGLPSAKEYDYCVWKGIDPELHPYGACFH DIEEKLSTGLIEWLRCQNADMVIVGGLATDYCVKTTVLQLLKGGAWKVIVNQAACRGITP ETVESAWQEMHSAGAIILENAEEIKKYINNQ >gi|241318756|gb|ACQV01000030.1| GENE 81 84380 - 85348 478 322 aa, chain + ## HITS:1 COG:NMA0243 KEGG:ns NR:ns ## COG: NMA0243 COG0859 # Protein_GI_number: 15793261 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 319 1 319 322 579 85.0 1e-165 MKILLVRLSSMGDLIHTLPAVEDLARQCPEVELHWLCEAGFADIARLHPFVKKVHVMKWR QWRKHLFQAETWREIGRLKTDLQAESFDFVLDSQGLIKSACFAKMAKSPIYGLDKHSARE SLAALAYSKMFAVPKGKNAVWRNRELFAQVFGYTMPETQVSGLSVPESGRLKNLKSPYYV ALHATSRDSKLWPVEHWRALLKKLNEEQQCNVYLPWGNETEKMRAEQIASDLPFASVCDK MNLLQAAFLLKNAEGIIGVDTGLLHLANALEKPVVGIYTDTDPAKTGVQVSAYAKNLGGI AQIPNVDEVYQTLMDCVAAYGK >gi|241318756|gb|ACQV01000030.1| GENE 82 85533 - 86282 998 249 aa, chain + ## HITS:1 COG:NMA0242 KEGG:ns NR:ns ## COG: NMA0242 COG2086 # Protein_GI_number: 15793260 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Neisseria meningitidis Z2491 # 1 249 1 249 249 365 93.0 1e-101 MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVA VSLGEKKCEETLRTALAMGADRAVHVETDAKLEPLAVAKLLKAVADKENPQILLLGKQAI DDDANQVAQMLAALLNAAQGTFASKVQIEGEEALVTREIDGGEETVALKLPAVISADLRL NEPRFVKLPNIMAAKKKPLEKLSPADLAVDISPRLNTVKFAEPKARQAGVKVADVAELVE KLKNEAKVI >gi|241318756|gb|ACQV01000030.1| GENE 83 86293 - 87225 1238 310 aa, chain + ## HITS:1 COG:NMB2154 KEGG:ns NR:ns ## COG: NMB2154 COG2025 # Protein_GI_number: 15677967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Neisseria meningitidis MC58 # 1 310 1 311 311 477 90.0 1e-134 MSVLIIAEHNNQHLNPATLHAVTAAAKLGNVDLLVAGSNAAAVVEEARQVAGVAKVLVAD APYYAEGLAEELAPLVVKLAADYRYVAATATAFGKNLLPRVAALLDVPQVSDLTEVVDNS TFVRPIYAGNAFETIQSNSEKLVLTFRATAFDAAGQGGNAEVVNVEATPAQNLSRFVNRQ LSQSDRPELTQAKVIVSGGRALGSAVKFNEVLTPLADALGAAIGASRAAVDAEYAPNDAQ VGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIVAINKDADAPIFNVADYGLVGDLFEV VPQLTEALKN >gi|241318756|gb|ACQV01000030.1| GENE 84 87287 - 87898 445 203 aa, chain + ## HITS:1 COG:NMA0240 KEGG:ns NR:ns ## COG: NMA0240 COG1739 # Protein_GI_number: 15793258 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 203 1 203 203 396 91.0 1e-110 MITTYKTITNPTQAEFKDKGSRFIAYAYPIRTLSDVKKYLDPLKEEHHKARHWCYAYRLG VDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYFGGTLLGVPGLIHAYKEST AQALAIAEVVEKNVEKTVWLKCEYPVLNEAIRIAKQYQADIVEQDLQLDCKLTVKIALAD YEACIAAWKNTRQIEVNTEKPFE >gi|241318756|gb|ACQV01000030.1| GENE 85 87953 - 88264 428 103 aa, chain - ## HITS:1 COG:no KEGG:NMO_0026 NR:ns ## KEGG: NMO_0026 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 1 101 1 101 105 153 83.0 2e-36 MQKRIDEIQSKYREWCELLPQLEADIARWKHAASLMQDMDDFYTNEYQACHQAIEEVADV DLRTQGEYSIMSEDALWNALGEFHQLAWEHLRSSVNALDRYQG >gi|241318756|gb|ACQV01000030.1| GENE 86 88404 - 89675 1446 423 aa, chain + ## HITS:1 COG:NMB2151 KEGG:ns NR:ns ## COG: NMB2151 COG0151 # Protein_GI_number: 15677964 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Neisseria meningitidis MC58 # 1 423 1 423 423 761 92.0 0 MKLLVIGNGGREHALAWKLAQSSKVETVFVAPGNAGTAIEPKLQNVALTAHQDLIDFCRN ENIAFTVVGPEAPLAAGVVNDFRAAGLKIFGPTQYAAQLESSKDFAKAFMAKYKIPTAQY QTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLDEAHAAIDDMLLGNKMGNAGA RVVIEDFLQGEEASFIVMVDGNHVLPMATSQDHKRLLDDDKGPNTGGMGAYSPAPVVTPD VYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDKTGAPYTIEFNCRFGDPETQPIMSR LDSDLVDLVEAAIDGKLDSVTAEWNPQTAVGVVLAAQNYPDSPKKGDVIFGLDKANQIGK VFHAGTATNEKGEVVTNGGRVLCVVGLGDDVAQAKSKAYEALETIRFDGMQYRKDIADKA INR >gi|241318756|gb|ACQV01000030.1| GENE 87 89747 - 90316 259 189 aa, chain + ## HITS:1 COG:NMA0237 KEGG:ns NR:ns ## COG: NMA0237 COG0009 # Protein_GI_number: 15793255 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Neisseria meningitidis Z2491 # 1 189 12 200 200 292 79.0 2e-79 MMFPRILSAAAQRRLQAHLKKGGLIAYPTESCYGLGCVPTLSKALNQLIHLKKRPQHKGM IVIGHSLEQLQPLLQRPSENIQTMLHEAWPAPKTFLLPASKKVLPSLRGKGRSKLAVRVP AHAGARRLCQVLETPLVSTSCNRAGKRACKTEREVRRQFGRKVWVVGGLIGKQKTPSQII DGETGARLR >gi|241318756|gb|ACQV01000030.1| GENE 88 90702 - 91142 444 146 aa, chain - ## HITS:1 COG:no KEGG:NMCC_2105 NR:ns ## KEGG: NMCC_2105 # Name: not_defined # Def: lipoprotein # Organism: N.meningitidis_053442 # Pathway: not_defined # 12 146 15 146 146 157 58.0 9e-38 MNIKRFSLAATVFAALILSACETTTTSSGGGSWTNIGTISEGNIKVAIDRSSIKRNGALV TFRDKKTVSKLKEERFVNTPAYKTAIGNWEIDCSNKTYRLAALQLMDEHGRVISNQSYTP TSIRPMSVMSGTITEKQYETVCGHKL >gi|241318756|gb|ACQV01000030.1| GENE 89 91353 - 92723 2201 456 aa, chain + ## HITS:1 COG:NMB0284 KEGG:ns NR:ns ## COG: NMB0284 COG0015 # Protein_GI_number: 15676208 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Neisseria meningitidis MC58 # 1 456 1 456 456 843 93.0 0 MINPIAALSPLDGRYAKSVEALRPIFSEYGLMRARVKVELNWLKALAAEPKIVEVPAFSD FTLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKERFSGVPEVAAASEFIHFAC TSEDINNLSHALMLQEAREVVLLPKLAEIIEKLTGMAHELAAVPMMSRTHGQPATPSTLG KEIANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMVAYPDVDWETHCRNFVEISLGLT FNPYTIQIEPHDYMAEFFQAISRVNTILIDFNRDVWGYISLGYFKQKVKAGEVGSSTMPH KVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQRDLTDSTVLRNMGVGVGYTVLGFVAH LRGLNKLEPNPSALAADLDATWELLAEPIQTVMRRYGVANPYEKLKDLTRGKDGITPEVL KLFIESLEIPAEAKAKLLELTPALYVGKAEELAKRI >gi|241318756|gb|ACQV01000030.1| GENE 90 92858 - 94426 2032 522 aa, chain - ## HITS:1 COG:NMA0290_1 KEGG:ns NR:ns ## COG: NMA0290_1 COG0526 # Protein_GI_number: 15793307 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis Z2491 # 1 196 1 196 196 369 90.0 1e-102 MNPRTLFSLCTKFGCLLALGACSSKIMDTEAATVPQALSSLKTPDNRPASVFLKKDKPTL IKFWASWCPLCLSELGQTEKWAQDTKFGSANLITVASPGFLHEKKDGDFQKWYAGLNYPK LPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRDPNADLGRLK NSFYKPDTQKKDSAIMNTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGKTENPSYED VSYRDTGHAETVKVTYDADKLSLDDILQYFFRVVDPTSLNKQGNDTGTQYRSGVYYTDPA EKAVIAAALKREQQKYKQPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRKADEPL PGKTKAAPQGKGFDAATYKKPGAAELKRLLTEEQYQVTQNSATEYAFSHEYDHLFKPGIY VDVVSGEPLFSSADKFDSGCGWPSFTHPINASAVTEHDDFSYNMRRTEVRSHAADSHLGH VFPDGPKDKGGLRYCINGASLKFIPLEQMDAAGYGALKGKVK >gi|241318756|gb|ACQV01000030.1| GENE 91 94572 - 96104 686 510 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 214 508 21 319 336 268 45 9e-71 MFSFFRRKKKQETPAPEEAQVQETAAKVESEVAQVVENIKEDAESLAESVKGHVESVVES AVETVSETVEQVREALTETPSETVEKIEEHVEAAKEAAVETVSETVEQVQETVAEMPSEL AEAAEEAAEQAEAVKEAAVETVSEAVAQVQETVAEMPSEIAEAAEEAAEQAEAVKEEVVE AVSEAVEQFQEAVAETPAEAPAPVEEHKLSWAARLKQGLTKSRDKMAKSLAGVFGGGQID EDLYEELETVLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKDALYDLIKPLEK PLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAW GERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVL QKAMPDAPHEIIVVLDANIGQNAVNQVKAFDEALGLTGLIVTKLDGTAKGGILAALASDR PVPVRYIGVGEGIDDLRPFNAKAFVDALLD >gi|241318756|gb|ACQV01000030.1| GENE 92 96279 - 97505 1348 408 aa, chain - ## HITS:1 COG:all4025 KEGG:ns NR:ns ## COG: all4025 COG0477 # Protein_GI_number: 17231517 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 23 392 15 384 396 99 25.0 8e-21 MSQTPASPAPRDWLLLIGGSTYKFTLTGFYLVALVAILKNHGYSLNQLSWIHLIGGIEAA KVLFAALMERRPAGRFGRFRGWLLAATLGLSAVFGLMACTDITQNFPLLLACCVLLSAMS AVYGCAMLGLSCIVLPHRERGFGGVIQTMAARGGKMIGGALVLWLYQEDGQTAAAGFMLA FSLLMLLQLLCYREPESPTAQGGLTALAARLVSFWRRPETGWRWLVLLFTVAAPYAFAAA TFVPKLADLGFTPKQTGGILAVGIPVACLIVTPLSGWFSRNYPRRKLVFLLYALQLPLLA SMTAIDTLAHVHPWLPPAQIIALSLSYTLLLPMILALVMDKSDRATAALDSSLQFSVVLL GSYAAGFAALRLAKAVGYADAYWAAVGLAILAGGLLYACRSLFDSDEP >gi|241318756|gb|ACQV01000030.1| GENE 93 97622 - 98020 601 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760675|ref|ZP_04758767.1| ## NR: gi|241760675|ref|ZP_04758767.1| hypothetical protein NEIFL0001_2340 [Neisseria flavescens SK114] # 1 132 1 132 132 249 100.0 5e-65 MHYFTPAKTLPEGTIYLTDLTHVADFADWLTEFKTLLNQNARFATVCTPMRRQVSDEQRI ADRKTYIEWIKAHRPQLSERCAAMLLIEPDAAQLQFFREQSSKLAPALGVNYIVEADEQT ALLRAEEALKAV >gi|241318756|gb|ACQV01000030.1| GENE 94 98334 - 100379 2929 681 aa, chain - ## HITS:1 COG:VC2211 KEGG:ns NR:ns ## COG: VC2211 COG1629 # Protein_GI_number: 15642209 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Vibrio cholerae # 2 681 15 687 687 469 38.0 1e-132 MQKPTLRRLPLLLAAAFASEWIYAADAAQDAEQVQLEEVVVTGERTNRSGFETATSNRVF TAPNIDRSGHNLSATDLLKQTVNTVDLGSGNDLPTVRGVDGSGPAVGAVAFFAGTRPRLN LSIDGRSATYNEYAFGTQSLWDMQQVEILRGPQSHVRGQNAVAGAVVMRSKDPTNEWEGA LRLGLGNQKTRNVAGAVSGPIVKNNLAFRLSAERQQRESYEPFVSYEPTGNPRRVENTNV RFKLLLTPENHPDFYSRLTLNHIRSRAPQNEIMGNTASRRFLKEKPVFVTGSTSGIWDVS WQLNDYLKLENKLIYGRYHNERLHLPMTVSPQGVPAELKGRELQWEPVLHFSNKGRLKGL AGLHYFRSKQDEWVDIRSVGGRNTFDDRNSVHALFAETTYSPSEKWDITAAARIEKETHK RSGGSGALHLDLDKGQTVFLPKIDIAFKPTDQWVSGIKAARGYNPGGAGITFGRPVVTYT YEPEYVNNYEWYTRWRSADRRLQLSGNLFLNHYRDMQLPFYLGTNSVVIRNAKKVHTYGA ELAADWQATDSLKLTTGLGLLNTKIKSYPDSGIEGNKLGRAPKYTANIGVKYLNDKGWEA GGDVRFYGGYYSAADNAESGKIGAYNQVNLYTAYNFKQGRISLYADNVFNRRRPIFISSA DRQDALYQRPRSVGVSAEWKF >gi|241318756|gb|ACQV01000030.1| GENE 95 100783 - 101451 833 222 aa, chain + ## HITS:1 COG:no KEGG:BCAM0075 NR:ns ## KEGG: BCAM0075 # Name: not_defined # Def: TetR family regulatory protein # Organism: B.cenocepacia_J2315 # Pathway: not_defined # 16 107 3 94 193 63 33.0 6e-09 MKTLYEQNQNLPTVMTASKQQTIVNTARRLFREHGFSAVSVGGICAEAAVSRVTFYKYYS SKNALLQEIVTEQKNRVRAEFEALLARQCNLREAAEAVFALQRQSFDELYSAAFLRDIEE NTDLELERFFHELNEEKYAFMRSFFHTLQQRRLIQPDLPVELIDLFIRQADILMRHPQLA ALYAAAPQKLPQDVLGLLLHGLAGEEGTGEEIDFLGKMKGIC >gi|241318756|gb|ACQV01000030.1| GENE 96 101559 - 101819 93 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|619505|emb|CAA77880.1| ## NR: gi|619505|emb|CAA77880.1| IS1106 ORF2 [Neisseria meningitidis] # 3 86 98 181 181 123 85.0 4e-27 MVALMGIGEGDVQFLDIAFLIGTGMLFVTEFVKAVFLCPTGIFVFARCGLAVDLSFVIDF YGLTLFAAGGLDNGGVNDGGGCFLYF >gi|241318756|gb|ACQV01000030.1| GENE 97 101781 - 102170 294 129 aa, chain + ## HITS:1 COG:NMA1253 KEGG:ns NR:ns ## COG: NMA1253 COG3039 # Protein_GI_number: 15794187 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 129 207 335 335 233 90.0 6e-62 MHITLANTHECNHLSPLLEGIAEGTTVYADKGYDSKENRQHLKEHQLLDGIMRKAHRNRP LTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAA NRLSAPVSA >gi|241318756|gb|ACQV01000030.1| GENE 98 102385 - 103281 1154 298 aa, chain - ## HITS:1 COG:NMA2226 KEGG:ns NR:ns ## COG: NMA2226 COG0142 # Protein_GI_number: 15795095 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 297 1 297 298 425 82.0 1e-119 MNPANELKTWQQKAQAQTELLLAHFLPSESQVPHTLHEAMRYVTLGGGKRLRPLLVLAAS ELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDA LQTQAFDVLSRPTGLSAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMH SLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADTATLGKT AGKDSDNDKPTYVKLMGLQAARTYAETLIAEAVALIEPFGDKALRLRQLAEFVTARKN >gi|241318756|gb|ACQV01000030.1| GENE 99 103265 - 103492 377 75 aa, chain - ## HITS:1 COG:NMB0262 KEGG:ns NR:ns ## COG: NMB0262 COG1722 # Protein_GI_number: 15676186 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Neisseria meningitidis MC58 # 1 75 1 74 74 84 85.0 7e-17 MKKNAPQSFEEALSRLETLTQAMQSSEMPLEDALAAYQEGNELVRYCQTKLAEVEQKLQV LDAGELKELNLEPGE >gi|241318756|gb|ACQV01000030.1| GENE 100 103628 - 105484 2366 618 aa, chain - ## HITS:1 COG:NMA2205 KEGG:ns NR:ns ## COG: NMA2205 COG0557 # Protein_GI_number: 15795074 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Neisseria meningitidis Z2491 # 1 618 10 627 635 1167 96.0 0 MNIFYEESGQFKVASIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA ADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAIKPGDKMEKNIMERLSTVYFPG GKITMLPENWIAAFSLDAGAYRPSISIYFDVDNEFNVGVPTCKIEAVNIAENLHIQTIEP HFNAETGLDEAGEMMFAHHQDLIWFHQFAVALQKARGKYEPDRAPQYDYSIELDEEGKVS VVRRERGSPIDMLVSEMMILANSTWAQMLHDNDLPGLFRVQPTGKVRMSTKSEPHIGMGV QHYGWFTSPLRRAADYINQKQLISLIDDSAEPLYQNSDAELFAALRDFDAAYTAYADFQR QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL DAEKQFIALNYQKAVLPG >gi|241318756|gb|ACQV01000030.1| GENE 101 105593 - 106513 1245 306 aa, chain - ## HITS:1 COG:NMB2139 KEGG:ns NR:ns ## COG: NMB2139 COG1752 # Protein_GI_number: 15677952 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Neisseria meningitidis MC58 # 35 306 24 297 297 417 82.0 1e-116 MNKLFSTFKTFLATSSVLVLAACPSGNVPQSKPSTQGQNTVSHPAPKPKATVALALGGGA SKGFAHIGIIKVLKENNIPVKIVTGTSAGSIVGSMYASGMSPDRLELEAEILGKTDLVDL TLSTSGFIKGEKLQNYINRKVGNRPMQQFPIKFAAVATDFESGKPVVFNVGNAGQAVRAS ASIPNVFQPVVIGNRKYVDGGLSQPVPVSAAKKMGANFIIAVDISARPAKNVSQGMFSYL DQTFNVMSQTALHQELGQANVVIKPQVLELGSVGGFDQKQRAIQLGEQAARAALPEIKRK LAAYQY >gi|241318756|gb|ACQV01000030.1| GENE 102 106613 - 107230 763 205 aa, chain - ## HITS:1 COG:NMB0286 KEGG:ns NR:ns ## COG: NMB0286 COG2979 # Protein_GI_number: 15676209 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 202 1 202 204 233 69.0 2e-61 MDFSQLLNQVLGAAQKGGKAVADSPLNSFGGGALTGALASMLLKKKNAKKLVKAGSVAAL GFLAYKGYQNWKQNRQQDELPQSAFQPAGLIGENHSRVILQTMIAAAASDGLIDDAERAA IERESGNDAEMAAWLQAEYAQPASIEQIAAAVGSDEALAAETYLAARLVCADLSRKEIVF LSRLSQALNLDDQLVESLEKQLELA >gi|241318756|gb|ACQV01000030.1| GENE 103 107381 - 108247 1277 288 aa, chain + ## HITS:1 COG:NMB0263 KEGG:ns NR:ns ## COG: NMB0263 COG1162 # Protein_GI_number: 15676187 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Neisseria meningitidis MC58 # 1 286 20 305 307 489 84.0 1e-138 MTDTAQIITSYGRRYIVRTPDGQTYDATTRKKRVDFACGDQVRISPINGEQVVIEDYLPR ESLLYRQDAWKTKLIAANVTQLLIVTAASPSPSEALLQRALLAAEAAGIDAVIVLNKADL PETAQWREKLKFYETLGYSVVETNALENADILRPILEGQTNILLGQSGMGKSTLTNALLG NQAARTGDISTALDSGKHTTTHAQLYDLNAETRLIDSPGLQEFGLHHLQAADLLQYFPDL RHLIGQCRFHNCTHRAEPGCAVKAAAESGEAKPERIEFLQRVTDELLR >gi|241318756|gb|ACQV01000030.1| GENE 104 108356 - 108550 268 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760667|ref|ZP_04758759.1| ## NR: gi|241760667|ref|ZP_04758759.1| hypothetical protein NEIFL0001_2351 [Neisseria flavescens SK114] # 1 64 1 64 64 99 100.0 6e-20 MLNLSAPVLKEIELLNDAGLSVGAIVAVLRLKFPVELHDPEDKKIEEAVLLMINPPRKAP SLSR >gi|241318756|gb|ACQV01000030.1| GENE 105 108574 - 110631 3094 685 aa, chain - ## HITS:1 COG:NMA0275_1 KEGG:ns NR:ns ## COG: NMA0275_1 COG0143 # Protein_GI_number: 15793293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 566 1 566 566 1161 96.0 0 MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECHYCCADDTHGTPVMLAA QKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGKIESR VIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKP ELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAEALNKMKEWLGEGEETTLSDWDI SRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGIDFDEYFKADSQTEMYHFI GKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGLNP EWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFLSKRFEGRLKDVS GSALLAKLAAESDTIAEQYENREYARALRDIMALADAVNEYVDANKPWELAKQEGQDERL HEVCSELINAFTMLTAYLAPVLPQTAANAARFLNLDAITWANTRETLGGHAINKYEHLMQ RVEQKQVDDLIEANKQSIQTTPAPAAEESQYEKVAEQASFDDFMKIDMRVAKVLNCEAVE GSTKLLKFDLDFGFEKRIIFSGIATSYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMIL SAATAEGKLKLLDVDAGAQPGDKVG >gi|241318756|gb|ACQV01000030.1| GENE 106 110758 - 112113 545 451 aa, chain - ## HITS:1 COG:no KEGG:Smal_2435 NR:ns ## KEGG: Smal_2435 # Name: not_defined # Def: putative lipase # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 3 431 2 417 442 140 30.0 1e-31 MRALNSQDFALLSDHIYGKKDENGEKKLVFDNEKNKEITLNGIKYAVERISDNPQNGYFG AIYRRLDTNELVVVHRGTEFETRQDREADMRMVKSHTNPQYNDARALTEVANAMAKHNGA TIYQTGHSLGGALAQLCGNRYGQRTETFNAFGAAGLKEALPINPLADRLIINHRMGGDYV SSASNHLGRSILYTTKNEVDNLRKGGFNTQDPSDDKFLANAGFRMPSSWGNWGSASDLYT SHAVSNFTHEHGLSVLSPKSPAHKLAENNMAMIGRFNNYVKEEIRKSPDKFEKYINLADR FIAENQPQYSNPYEQQDRPQYAFLDLQINASKLQNFSPENQKFFNTAMVHLTTYHKTNNL PIDEKKLQNSAMALTALAQSKNITDLTLFSVKNDQYLIGNRNPTLNLASMDIGLSASIPV EKSFNQIQQTAEYEEQQKQLAQSQSRGMSIG >gi|241318756|gb|ACQV01000030.1| GENE 107 112110 - 112829 409 239 aa, chain - ## HITS:1 COG:no KEGG:Smlt2989 NR:ns ## KEGG: Smlt2989 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia # Pathway: not_defined # 17 237 15 215 217 82 32.0 2e-14 MKPFILLFGLCAALSLTACNKEKNVYEEYGFKESDFPTYKLPKGDAPPKDVKINPNRKEH YQAVVKIKDAPLAFQIVTGDELYQSENCKYVTNRWVGATTWPQYRKKLELTKIDNNTYAT DFYSDTPLDEDYYGEGVCKWQFLSAAIVMEPTGKDKRETALIVRIDSEDLKKLTEENPEL KVTNHYEKNLYPIATEFQGNGSIDSGYSDRGIESWHKDVADYKPDSLFTVELTLRKVEK >gi|241318756|gb|ACQV01000030.1| GENE 108 112911 - 113396 31 161 aa, chain - ## HITS:1 COG:NMB2065 KEGG:ns NR:ns ## COG: NMB2065 COG2890 # Protein_GI_number: 15677887 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Neisseria meningitidis MC58 # 21 144 15 133 423 91 39.0 7e-19 MNDSSLTTKKWLTRYGHKLCFFIAIFIWICSLFQNVFTFGKEGQYEGFFVLIIGTIFGPG LGHIGYFAVYANYIWFILIFISLIRPQAKKFIFTLHGLLWVVALLTFTLNEVIVNEAGGH AKPTYGLGLYLWFTAFLLTTIAEFLKQRIYQNLKENTKRIK >gi|241318756|gb|ACQV01000030.1| GENE 109 113660 - 114913 2181 417 aa, chain - ## HITS:1 COG:NMA0258 KEGG:ns NR:ns ## COG: NMA0258 COG0766 # Protein_GI_number: 15793276 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Neisseria meningitidis Z2491 # 1 417 1 417 417 723 91.0 0 MDKLKISANGPLNGEIIVSGAKNAALPLMCAGLLTSGTLRLKNVPMLADVKTTQKLLQGM GARVLTDNISEFEINGGTVNNTCAPYELVKTMRASILVLGPTLARFGEAQVSLPGGCAIG SRPVDQHLKGLETMGAEITIEHGYVKAKGRLKGTRVTMDVVTVGGTENLLMAATLAEGTT ILENCAIEPEVVDLAECLVKMGAKISGIGTATMTIEGVKELHGCEHSVVPDRIEAGTFLC AVAMTGGKVVLRNAAPKTMEVVLNKLTEAGAIIEAGDNWISIDMQQRPKAVDIRTVVHPG FPTDMQAQFMAMNAIAEGSSRVVETIFENRFMHVPELNRMGADITTEGNTAYIKGVEKLS GAVVMATDLRASASLVMAGLVAEGETIVERIYHLDRGYEYIEKKLGGIGAKIERVRG >gi|241318756|gb|ACQV01000030.1| GENE 110 115110 - 116027 1300 305 aa, chain - ## HITS:1 COG:NMA0255 KEGG:ns NR:ns ## COG: NMA0255 COG2177 # Protein_GI_number: 15793273 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Neisseria meningitidis Z2491 # 1 305 1 305 305 523 87.0 1e-148 MSMIHYISLHVESARAALKELLRQPIGTLLTLLMLAVAMTLPLFMYLGIQSGQSVLGKLN ESPQITVYMDTDAASSDADTVKNLLQRDSRIDKVRFISKQEGLEELQTNLDQNLVSMLDG NPLPDVFIVTPDPATSPDQMQAIYKDITKLPRVESATMDTEWVQTLYRINEFIRKILWFL SLTLGMAFVLVAHNTIRLQILSRKEELEITKLLGAPASFIRRPFLYQAMWQSIFSAAVSL GLSAWLLAEVRPLVDAIFKPYGLNIGWRFFTFSEVSLVFGFVIALGIFGAWLATTQHLLG FKAKK >gi|241318756|gb|ACQV01000030.1| GENE 111 116024 - 116674 299 216 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 215 1 217 245 119 30 7e-26 MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTILKLISGITKPTKGKVW FNNQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVILPLRISGYQPRKAEERARI AIEKVGLKGRENDMPITLSGGEQQRLCIARAVVHQPSLLIADEPSASLDRAYALDIMELF KTFHEAGTTVIVAAHDETLMADYGHRVLRLQKGRLA >gi|241318756|gb|ACQV01000030.1| GENE 112 116923 - 117405 633 160 aa, chain - ## HITS:1 COG:NMB0006 KEGG:ns NR:ns ## COG: NMB0006 COG0526 # Protein_GI_number: 15675954 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Neisseria meningitidis MC58 # 1 160 1 160 160 251 78.0 3e-67 MKALTALLLSAAVFTAVPAFAADETAGWQDNKPQSLESLKAPVRVVNLWATWCSPCRKEM PAMSAWYKAQKKGSVDMVGIALDTTDNIGKFLKQTPVSYPIWRYTGANSRNFMKAHGNNV GVLPFTVVEAPKCGYKQTITGEVNEKSLTAAVNLAKTKCK >gi|241318756|gb|ACQV01000030.1| GENE 113 117575 - 117934 552 119 aa, chain + ## HITS:1 COG:NMA0252 KEGG:ns NR:ns ## COG: NMA0252 COG1393 # Protein_GI_number: 15793270 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Neisseria meningitidis Z2491 # 1 118 1 117 117 163 72.0 7e-41 MPSEFTLYHNPRCSKSRAALALLEEKGVAADVVKYLDTAPDLATLQDMFAKLGIESARGM MRTKDDLYKELGLDNPDLDNAALLQAIAEHPALLERPVLVTPTRAAIGRPLENIAALLG >gi|241318756|gb|ACQV01000030.1| GENE 114 117961 - 118617 766 218 aa, chain + ## HITS:1 COG:NMB0004 KEGG:ns NR:ns ## COG: NMB0004 COG1434 # Protein_GI_number: 15675952 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 4 214 5 214 214 291 67.0 8e-79 MISLLKSRNGLRYYLFRGLALSVLLVCGIFLAGTWQIYRTGLQTLPKDAHADAAVVLGAA AWDKRPSPVFRERINHAITLYQSHRVGKIIFTGSTSKKGFMTEAEVGRRYALKQGIPAHN ILFENTSRNTYENLRNIIPIMHANGVGSIIVVSDPYHLARAEEMAADLGLSDAQFSATPT TRFDERSKKAKFLMQESYSLFLYRIGKWSDAVWNWIGG >gi|241318756|gb|ACQV01000030.1| GENE 115 118688 - 118945 297 85 aa, chain - ## HITS:1 COG:no KEGG:BH0735 NR:ns ## KEGG: BH0735 # Name: not_defined # Def: hypothetical protein # Organism: B.halodurans # Pathway: not_defined # 6 76 15 85 93 67 50.0 1e-10 MNGQNQIGHQQAPVVSVKEWLLTNLIMMIPLVNLIMMLVWAFSSNTNPNKANYFKAALIL FAIVMAIYLVLAVVIFGSIAANQYQ >gi|241318756|gb|ACQV01000030.1| GENE 116 119063 - 119920 1226 285 aa, chain - ## HITS:1 COG:YPO1343 KEGG:ns NR:ns ## COG: YPO1343 COG0614 # Protein_GI_number: 16121623 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 2 283 96 374 378 211 39.0 2e-54 MFKQKLPTLQNIADIGNINTGTFSLEKTLALKPDVLILADWQYKAIATHLPRIKAAGIPV VVVDFNAETVARHTRSAEIFGELNGTQARAQKIAAEYARGIADIQKRVARAKQSKPKIYI EFGDKGPSEYSYTFGKDMWGAIADTAGGNNIAAPYVKNWGPINPEKFLTAKPDVIVISGT ENGHKDKPDIMAMGIGISQADAQRRLAGFVKRKGWADIPAVKNKRVYGIYHTASRSLADL ASAQFIAKTLYPQQFADIDPNKTYLDFYRKYLPVVPDGTFYIQLK >gi|241318756|gb|ACQV01000030.1| GENE 117 120321 - 121715 2417 464 aa, chain + ## HITS:1 COG:NMA0250 KEGG:ns NR:ns ## COG: NMA0250 COG0008 # Protein_GI_number: 15793268 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis Z2491 # 1 464 1 464 464 934 96.0 0 MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDTDLARSTAESVNIILDG MKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYCSKEELEAMREKAEKEGTA TYDRRWRPEEGKTLPEIPADVQPVVRFKTPLDGVTEWTDLVKGEISIPNEALDDLIIARA DGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINILKAIGANLPEYGHLPMILNEQG KKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWAHGDDEFFTMEQFIEWFDLKDVSPS PSRMDLKKLYWINGEHIKITANEKLAEMVKPRLALRDIHETSKPALEDVLALVKDRAQDL NTLADECLYFYVKQTPAEADVQKHWDDEAAVRMLRFAERLEGLEDWTAEAIHDLFKPFCD EEGIKMGKLGMPLRLAVCGTAKTPSVDAVLALIGKEEVLKRIRS >gi|241318756|gb|ACQV01000030.1| GENE 118 122248 - 123198 459 316 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760685|ref|ZP_04758777.1| ## NR: gi|241760685|ref|ZP_04758777.1| hypothetical protein NEIFL0001_2367 [Neisseria flavescens SK114] # 1 316 1 316 316 579 100.0 1e-164 MSDYYYSPSTFVSYAVRKANEYGGFAGEDDKRPHNNSYDAYRHALLSAVITQNIQKVAES TLISGSGIVYPVFQDQFHELSKAIGRDRAKAILDDHEDISNKPANMSMEDWRKEVNMDKW NNAVGQKEYFKWEQAKIKGETKDPLEKWIYDAVKRGETINNLKDNRVFTEEMRLSFKNEK EQLLQYSQSFFVSKLQSLAPETQNLFNAVKEHLTEYHEKNGIPIEEAKLQNSAMALTALG YSKKMTDVTLFNVKDGQYLIGERNPILNRVSMDMQTAAYIPIEESLAKVQEATQRFEYEE QQRQYAQSQAQGMSRS >gi|241318756|gb|ACQV01000030.1| GENE 119 123476 - 123814 483 112 aa, chain + ## HITS:1 COG:no KEGG:NMB0002 NR:ns ## KEGG: NMB0002 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis # Pathway: not_defined # 1 110 19 128 131 107 59.0 2e-22 MKKTLLALMMLSAAAAYAGEAEDRLLSVQSVYRAALHEQNSNDSKIISLQSDLESAQRRL QAAQSDIDRLKGEIQTALAQKEQQNAKLQQAGQMLDAAWNAVYGAGGSKAKQ >gi|241318756|gb|ACQV01000030.1| GENE 120 123874 - 124209 404 111 aa, chain + ## HITS:1 COG:NMB0037 KEGG:ns NR:ns ## COG: NMB0037 COG2824 # Protein_GI_number: 15675977 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Neisseria meningitidis MC58 # 1 111 1 109 109 186 84.0 1e-47 MSLPPCPKCHSEYTYEDGAQYVCPECAHEWNKADAAAASDDALEVKDANGTVLQDGDTVV LIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLKSEFVKKA >gi|241318756|gb|ACQV01000030.1| GENE 121 124427 - 126736 2416 769 aa, chain + ## HITS:1 COG:NMA2213 KEGG:ns NR:ns ## COG: NMA2213 COG0514 # Protein_GI_number: 15795082 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Neisseria meningitidis Z2491 # 1 767 1 763 766 1231 80.0 0 MPQPTAKQILYEVFGYPEFRGKQEAIVNALAGGESLMVLMPTGGGKSLCYQIPALMREGV AVVVSPLIALMNDQVASLHVAGIEAAAVNSSTSADEAREIADKLAQGRLKLLYVAPERLV TDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGMLAERYPNIPRIALTATADAA TRADIKHYLHLDNAPEFISSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSR KKVEDVAQFLCENGLEAIPYHAGLSMDVREENQRRFTHEDNIIVVATVAFGMGIDKPDVR FVAHLDMPQSIEHFYQESGRAGRDGLPAVSWLCYGLNDWVLLRERIAEGNSDEVQKQIEM QKLDAMLSVCETAACRRVLLLKHFGEESESCGHCDNCLHPPVRFDGTVLVQKLLSCVYRA GQRFAAGYITNLLRGKSDDWIQRNGHDKLSTFGIGSEQTDKEWRSVIRQCISLGYLTVNV EQHQALQLTEAAKKVLKGETEVMLRPLRREKTATQKPKDDWLRTEREERLWQALRQWRQQ RARAEEVPAYVVCGDKTLRDIVEKMPRSLEDLHQIYGLGEAKINKFGLEILDVCETAEAG TVSTDSTQVIHSLGKREQALKQALETWREQQASSDQVTLGTIFSNESMDDLLTNTPAEPI DLLGVYKLGEKRIEQYGEGILNICRPFSDGLSEEDKRKRRLMRRLLQWNIDTARHEGLEA YQICSKVTLRAIAARRPQDLVELAEIHGMNEEKTDKYGAEIVELCKQAD >gi|241318756|gb|ACQV01000030.1| GENE 122 126961 - 127410 315 149 aa, chain + ## HITS:1 COG:NMB2140 KEGG:ns NR:ns ## COG: NMB2140 COG2259 # Protein_GI_number: 15677953 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 8 143 6 141 149 176 80.0 1e-44 MNTSSNLSWQAAFGLLALRLFAAYEFLESGLEKWNGENWFADINSQFPFPFNLLPDTVNW NLAMWAELVLPALLIVGLATRLSALGLMVVTAVAWSAVHAGLGYNVCDNGYKMALIYLVV LFPVLLQGAGRLSLDALLKKRCCRIKHFL >gi|241318756|gb|ACQV01000030.1| GENE 123 127495 - 127812 483 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225077489|ref|ZP_03720688.1| ## NR: gi|225077489|ref|ZP_03720688.1| hypothetical protein NEIFLAOT_02552 [Neisseria flavescens NRL30031/H210] # 9 105 1 97 97 85 94.0 8e-16 MKKNVAAALAGALSLSLAAGVVAADKPLSSKAGVQKSAQGSCGAVKAGEGSCGASAVSKA SEGKCGEGKCGSTVEKTHAKKGKASKAKAAKVVEGKCGEGKCGSK >gi|241318756|gb|ACQV01000030.1| GENE 124 127899 - 128741 883 280 aa, chain + ## HITS:1 COG:NMA0228 KEGG:ns NR:ns ## COG: NMA0228 COG3220 # Protein_GI_number: 15793250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 280 1 280 280 555 96.0 1e-158 MIQHAGLGYRRDLAEDFLSLSDDSPIRFIEAAPENWLKMGGRARKQFDRVAERLPLALHG LSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGGHLYDLLPLPFTEEMVQHT ARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAVAREADCSIHLDVNNIYVNAV NHGLLSPEAFLENVDAGRVCYIHIAGHDVETPELLIDTHGAAVLPTVWDLLELAYAKLPT IPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEYCRAA >gi|241318756|gb|ACQV01000030.1| GENE 125 128731 - 129417 704 228 aa, chain + ## HITS:1 COG:NMA0229 KEGG:ns NR:ns ## COG: NMA0229 COG3219 # Protein_GI_number: 15793251 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 228 1 228 248 319 69.0 3e-87 MQPETSAKYQHRFAQAIREGKAADGLPQERLNVYIRLIRNNIHSFIDRCYTETLQYFDSE EWGRLKEGFVRDAHAQTPYFQEIPGEFLRYCQSLPLSDDLLALMDFEHTQLLAETAQTDS QTTHADSDDLAYTLSPAAFVRRYQYDVTDELQAVETAVLVWRDKEDDVMYQTLDGFGALL LETLAETPTSLNGLQTMLAEFMPSENVWQDALRQQWTDWREQGILVAA >gi|241318756|gb|ACQV01000030.1| GENE 126 129364 - 129558 150 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYQYEMNDQYASDFTLIRKEHAIESINDFSSIFVLPKPTAPVSDGLDLCRNQNALFPPIR PLLP >gi|241318756|gb|ACQV01000030.1| GENE 127 129560 - 130138 756 192 aa, chain + ## HITS:1 COG:NMB2144 KEGG:ns NR:ns ## COG: NMB2144 COG1595 # Protein_GI_number: 15677957 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Neisseria meningitidis MC58 # 1 191 1 191 195 298 74.0 3e-81 MALPELTDAELAESRKLLLRFAHIQLPDRPDLVEDLVQETMLSAYRAAEGFKGDAQVSSW LFAILKNKITDCLRQIGRQRQVFVTRDEEALDEAFEGHFAADGHWTDEGQPQGWDSPEAS LNNKEFYQVLQTCLYHLPENTARVFTMKEILGFSSDEIREQCGISHANYHTIMHRARETL RQCLQIKWFSHA >gi|241318756|gb|ACQV01000030.1| GENE 128 130151 - 130324 106 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241760676|ref|ZP_04758768.1| ## NR: gi|241760676|ref|ZP_04758768.1| conserved hypothetical protein [Neisseria flavescens SK114] # 1 57 1 57 57 97 100.0 4e-19 MKKCRKITDLISKQQDQVHLGLFNRIALAVHLSLCPRCREYKKQLELISNAMHKMFR >gi|241318756|gb|ACQV01000030.1| GENE 129 130564 - 134712 6105 1382 aa, chain - ## HITS:1 COG:NMB2135 KEGG:ns NR:ns ## COG: NMB2135 COG2911 # Protein_GI_number: 15677948 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 1377 17 1397 1405 1719 64.0 0 MTDTANTSTPSEQQPAPPKRKKRLLRGFVLSALGVLTVSAGAIGWLVGTESGLRFGLYKI PSWFGVKISSDTLKGTLIEGFEGDKWLIETEGADIKISSFRFDWKPSELTRPSLHITEVV AGDIAIVTKRTPPKEEEPSKGLPDSIDLPVTAYLDHLETGKISVGKRFDKQTVYLDHLHA AYHYDKKEHRLHIKTADTPWSSSTGAVVIGLNKPYVLNTAIYTKGQLEGETLHGTVRLWG SLQDVSTDLLLDSDNVHLSAKSTIHPFADSLNETVGEILIKGSNINPQAFLPSLPKARLN FDATTIPSFTNGVALEGSIDLENDQAGFADENHIPVKRILGEFIVDDKGTVMIEDISVDL LKDGSIDVSGSIDTAQDQLKLALGINNTGADDFVRQNIAGRLNGSIDVKGETSSPVVNWN LDSGFARTDGMLFFQTDKQLGQRTLKLDKVRLVPQNGGELNAKGSLELFKDRKLQLDIVS KAFNPARIDPQLPQGSVNGNINLTGILAQEKFAGKMQFAPSTLNGVPLSGKADIAYENKH LARALTDLTLGNNIVKTNGSFGKKGDHLNLNITAPDLSRFGFGLGGLLNARGYISGSFSD GLKTLEADLNGEAHNFKVADTVNIRTLDFKLKGSPDTNRPLSADIKGEHIAVSGGATLID NVNLLISGTGSHHHIRGNSSMAVDNKRYKLDLDATGGLNKDQTQWKGTVDTLDINGAFNL KLQNRLNLEAGSERVSLSSARWAAMGGSLNLQNFVWDKKAGITSKGSAQNLHITELHNFY TPPIEHNLVLGGDWDLAYSQNARGFLNISRQSGDIILPGKDPKNKQPLGLSALALRTRFQ NGRIDSTLEGNTRFGKVNGTLGIAQQFGNNINNAPVSGKVNISVPDLGSLKSFMPATAQG IAGRLNAIATIGGRLSSPTVNSNLDLQTNYGRANGTVNIGQGTSFDTAPLSGKLNLNVAN LEVFRNFLPVGQTLKGRLNAAVNLAGRLNDPQLSGLINGDNLYYRHQTQGLILDNGVLRS RLQGQKWVIDSLKFHRGGTIELKGAVNLANANPDVDVDIVFDKYRTLSRPNRRLQLSGAA KVLYNPGKGVSLNGTLNTDFGRFGSQKSSMPTLDDDVVVLGETPKEATATTPINMNLVLN INDNVRFVGYGADVTIGGKLTLTSRPGETVQGVGTVRVVKGRYKAYGQDLEITKGAVSFV GPLTDPNLNIRAERRLSPVGAGVEVLGSLNNPRVTLVAKEAMSEKDKLSWLILNRASSGS DGDNATLSAAASALLAGQVNDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQLTNN LYAGYEYGISSAEQSVKLVYQLTRAIQAVARIGTRSSGGELKYTIRFDNLFGKDKPEPEE QQ >gi|241318756|gb|ACQV01000030.1| GENE 130 134793 - 136634 2746 613 aa, chain - ## HITS:1 COG:NMA0296 KEGG:ns NR:ns ## COG: NMA0296 COG0729 # Protein_GI_number: 15793311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Neisseria meningitidis Z2491 # 1 613 8 615 615 942 74.0 0 MTKLTYPVLFASLALAYGHALAVDTSVPKAEDYEAVPESEMPKQPKDDQTGKLKPKFPVK IDTQDSEVKEMLEEYLPLITQQQEEELDKEQVGFLAEEAPDNVKTMLRTKGYFNSNVNIQ DHGESYTVNVTPGPRTKVDNVSVAILGDVLNDDNLAEYYQNAMENWQQPVGENFDQDGWS ASKTSVLSAVTRKKYPLAKLTTTQATINPNTQKADLNVIVESNRPIYFGDFQITGTCRYP ESEVSGMARFHPGSPYDLDKILDLQQALEQNGHYSGASVQADFDQLQGDRVPVKINVTEV KRHKLETGIRYDSEYGIGGRIAYDYYNLFNKGYIGSIVWDMDKYETTLAAGISQPRNNRG NYWTSNVSYNRSTTQNLEKRALTSGIWYVRDRNNIDARFGLEFITEDRKVPDTNYDLGRS HATMLTASWKRQSIETELHPQNGYYLDGKIGATLGKFLSSTQMARATARAGYFFTPENKK LGTFIVRGQAGYVYAREGEEVPSSLMFRTGGATSVRGYELDSIGLAGPNGSVLPQRALVV GSLEYQFPVTKSFSGAIFHDVGDAASNFKHMTLKHGTGLGVRWFSPVAPFSFDIAYGHHD KKIRWHISLGTRF >gi|241318756|gb|ACQV01000030.1| GENE 131 137082 - 138305 1922 407 aa, chain + ## HITS:1 COG:NMB2133 KEGG:ns NR:ns ## COG: NMB2133 COG3633 # Protein_GI_number: 15677946 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Neisseria meningitidis MC58 # 1 405 1 405 409 566 85.0 1e-161 MASGNPILNALNRVSLVAQIAIGLVLGIIVGAVSPQVGISAGLLGSLFVGALKAIAPILV FVLVTAAIAQHQKGNQAYIKPILILYIFGTFAAAVVAVIASMAFPTTLILRTAGDVSVAP PSGIVEVLKTLLMNLVANPINALANANYIGILAWALVLGAALRHHGSDTTRQVAADLADT VSTVVKWIIRFAPLGIFGLVSSTIAETGFEALAGYMQLLAVLLGCMLFIALVVNPIIVWS QIRRNPFPLVFTCLRESGIYAFFTRSSAANIPVNMALAKKLGLHEDTYSISIPLGATINM AGAAITITVLAMAAAHTQGITVDFATALLLSLVATVSACGASGVAGGSLLLIPLACSLFG IDNDVAMQVVAVGFIIGVIQDSAETALNSSTDVLFTAAADLGRQRKE >gi|241318756|gb|ACQV01000030.1| GENE 132 138533 - 140389 235 618 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 366 594 132 355 398 95 28 2e-18 MIKKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSNIEGLRKWIAVLAVFTAGIGIMEALL FQFMGKVVDWLGKYTPATLFAEKGWALTAMAGMMVFFALWTFLASNVRLQTLQGVFPMRL RWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALAMRDVVMTVADMVVYVLVYFITSGVIL ISFDGWLLLPFIGWIIGFALVMRFLIPKLGKTAARQADARSLMTGRITDAYSNITTVKLF SHGAREAAYAKQSMEEFMVTVHAQMRLATLLHTCSFIVNSSLTAGTTALGIWLWYHGQVG VGAVATATAMALRVNGLSQYIMWESARLFENIGTVNDGMATLSKPQTILDKPNALPLKVS QGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEKVGLIGRSGAGKSTIVNLLLRFYEPQSGT ISIDGQNVDSVTQESLRAQIGLVTQDTSLLHRSVRDNIVYGRPDATDAEMISAAERAEAA DFIPNLSDAKGRRGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEV EAAIQESLDKMMDGKTVIAIAHRLSTIAAMDRLIVLDKGRIIEEGSHAELLGKQGLYAKL WAHQSGGFLSEHVDWENN >gi|241318756|gb|ACQV01000030.1| GENE 133 140498 - 141226 1059 242 aa, chain - ## HITS:1 COG:NMB0283 KEGG:ns NR:ns ## COG: NMB0283 COG1611 # Protein_GI_number: 15676207 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Neisseria meningitidis MC58 # 12 223 7 205 210 263 60.0 3e-70 MSLLKKLPKPMLPDETRRDIQARESYHVLKIISEFVEAGEELRAIQPAVSIYGSARTPEN HPDYEFTLRLARKLSDAGFSVISGGGPGIMEAANKGAFAGASPAVGLNIVLPHEQKANPY QDLSIKFQHFFPRKVMFVKHAVAYVVMPGGFGTLDELFESLTLVQTGKTPDRPIILVGKA FWAGLLDWIREQLLGRNLILEEDLNLIRVIDDEDEIIEEIFAHYENRLEDLSEHQNAWSL GL >gi|241318756|gb|ACQV01000030.1| GENE 134 141367 - 142083 758 238 aa, chain + ## HITS:1 COG:PM0479 KEGG:ns NR:ns ## COG: PM0479 COG0564 # Protein_GI_number: 15602344 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Pasteurella multocida # 2 226 3 228 243 277 62.0 1e-74 MLDIIHRDSRTIAVNKPAGMLVHRSWLDKHETRFAVQTLRDQIGQHVYPVHRLDRPTSGV LLFALDTEAARLLTQQFENKTIEKTYWAIVRGYLPSDGLIDYALKYMPDKIAEAQTEATL QEAQTAYRCLAQTELPFQSALRYPTSRYSWAELTPYTGRKHQLRRHMKHIFHPIVGDTNY GDLRQNHAVAEHIGTQRLMLHARSLSFQSIEDGSRITVNAPTDNDWRLWMEKFKTEAV >gi|241318756|gb|ACQV01000030.1| GENE 135 142181 - 143284 1554 367 aa, chain + ## HITS:1 COG:NMA0224 KEGG:ns NR:ns ## COG: NMA0224 COG1186 # Protein_GI_number: 15793246 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Neisseria meningitidis Z2491 # 1 367 1 367 367 682 98.0 0 MEAEVINQLNNTLNDLEKRSEDIRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGK ERKILEGIVVTLDNIATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRM FNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINR ATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPAD LRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYEL EMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSRIKDLRTGYEVGNTKAVLDGDLDGFIE ASLKQGV >gi|241318756|gb|ACQV01000030.1| GENE 136 143989 - 145446 1916 485 aa, chain + ## HITS:1 COG:NMB2136 KEGG:ns NR:ns ## COG: NMB2136 COG3104 # Protein_GI_number: 15677949 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Neisseria meningitidis MC58 # 1 485 1 485 485 642 71.0 0 MSGQKPSSAEKTFFGHPLQLSTLFHIELWERFSFYGMQGILLIYLYYAANQGGLGMDKAL AGGIVGAYGGSVYLSTILGAWLADRIWGAERTLFIAGIVVMIGHILLAIVPGLMGLLLGL VFIALGSGGVKSSAGSMVGSLYERDDLRELRDAGFSIFYISINIGGFLGPLLTGILQDRM GFHYGFGAAAVGMAFGLLWYSRGRKDLPHTPAPNPLRPEKVQTAIAVGVLLILVLGSVIA SGALNLENFSRWLLGVVIITVIAYFARLLGSSQVEAANKRYIMAYIPLFLTICMFWAVWF QVYTVATVYFDETVDRTFFGFTVPVSWKDSIQAMWVVLFSGVMAAVWTKMGKRQPKTPLK FALAMLVTGVSYLCFIPYISSGTPMPIIVFMLVLLAITIGELMLSPISLSFSTKIAPSMF KTQMVALNFLALSIGFTLGGVLFKDYYNAQSPLDFYWMLATIGAVTCGILLVLAPVLNRM LKGVD >gi|241318756|gb|ACQV01000030.1| GENE 137 145783 - 146139 239 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 1 118 6 126 129 96 39 6e-19 MLASYFPVLVFILVGLAAGVLFILLGTILGPKRHYAEKDAAYECGFEAFENARMKFDVRY YLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVLTVGFIYEWKKGALEWE >gi|241318756|gb|ACQV01000030.1| GENE 138 146130 - 146612 453 160 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 12 154 17 158 170 179 55 9e-44 MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMHAGMARYDLDRFGIIFR PSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSCANGGGYYHYSYSVVRGAD RVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE >gi|241318756|gb|ACQV01000030.1| GENE 139 146625 - 147218 859 197 aa, chain + ## HITS:1 COG:NMA0017 KEGG:ns NR:ns ## COG: NMA0017 COG0852 # Protein_GI_number: 15793051 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Neisseria meningitidis Z2491 # 1 197 1 197 197 397 100.0 1e-111 MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTALRDHEELHFELLVDLC GVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDDFPVVESVVDIYNSADWYE REAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGYVEMRYDEEQKRVIYQPVTIE PREITPRIVREENYGGQ >gi|241318756|gb|ACQV01000030.1| GENE 140 147208 - 148464 1979 418 aa, chain + ## HITS:1 COG:NMA0016 KEGG:ns NR:ns ## COG: NMA0016 COG0649 # Protein_GI_number: 15793050 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Neisseria meningitidis Z2491 # 1 418 1 418 418 873 99.0 0 MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLLHRGTEKLAETKTYLQA LPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMFAEVTRILNHLMGIGSHAF DIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGVYRDLPDFMPKYESSKFRNAK VLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDNRIWKQRTVGIGVVTPERAMQKG FTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVNGDCYDRYLCRMEEMRQSVRIIKQC SEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLIHHFKLFTEGMHVPEGETYTAVEHPKG EFGVYIISDGANKPYRLKIRAPGFAHLQGMDEMAKGHMLADVVAIIGTQDIVFGEVDR >gi|241318756|gb|ACQV01000030.1| GENE 141 148464 - 148937 708 157 aa, chain + ## HITS:1 COG:NMB0245 KEGG:ns NR:ns ## COG: NMB0245 COG1905 # Protein_GI_number: 15676169 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Neisseria meningitidis MC58 # 1 157 1 157 157 306 97.0 1e-83 MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPETIAFVADYIGITPAQAY EVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMDTGEYLKKKLGIGYGETTPDGKFTLVE GECMGACGDAPVMLVNNHSMCSFMTEEAIDKKLAELK >gi|241318756|gb|ACQV01000030.1| GENE 142 148995 - 150290 1832 431 aa, chain + ## HITS:1 COG:NMB0246 KEGG:ns NR:ns ## COG: NMB0246 COG1894 # Protein_GI_number: 15676170 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Neisseria meningitidis MC58 # 1 430 1 430 433 884 99.0 0 MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENISQTDVIDEVKTSGLRGR GGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDIIMFNPHALIEGMIIAGYAM GAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGSDFEFELFAHHGYGAYICGEE TALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTETFSSVPFIIRDGGQAFADKGIPN AGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGGMRGGKKLKAVIPGGSSAPVLPADI MMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVKALERLSYFYYDESCGQCTPCREGTGW LYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRTICALADAAVFPVRSFTKHFRDEFVHYIE HGGPMKPNKWC >gi|241318756|gb|ACQV01000030.1| GENE 143 150349 - 152610 2767 753 aa, chain + ## HITS:1 COG:NMB0249 KEGG:ns NR:ns ## COG: NMB0249 COG1034 # Protein_GI_number: 15676173 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Neisseria meningitidis MC58 # 1 753 1 753 753 1457 96.0 0 MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAANCRMCLVDVEKAPKPLP ACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCDQGGECQLQDLAMGYGKTT SRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEIAGLQEIAMANRGEHSEIMPF IGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNRRKSVSAHDALGSNLIVQTKDHT VRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKNPKIKQGGEWMDVDWKTALEYVRSA IECIAKDGNQNQVGVWANPMNTVEELYLAKKLANGLGVKNFATRLRQQDKRLSDGLKGAQ WLGQSIESLADNDAVLVVGANLRKEQPLLTARLRRAAKDRMALSVLASSKEELFMPLLSQ EATHPDEWAGRLKNLSADAEHAVTASLKNAEKAAVILGAEVQNHPDYAAIYAVAQELADA TGAVLGILPQAANSVGADVLGVNSGDSVAEMANAPKQAVLLLNVEPEIDTVDGAKAVAAL KQAKSVMAFTPFVSETLLDVCDVLLPIAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPL WKVLRVLGNLFDLQGFEYHDTAAILKDALDAESLPSKLDNRSTWAGEGVQTASNRLVRVG GVGIYHTDSIVRRSAPLQATSHAAVPAARVNPNTLARLGLQDGQTAVAKQNGVSVSVAVK ADAGLPENVVHLPLHTENAALGALMDTIELAGA >gi|241318756|gb|ACQV01000030.1| GENE 144 152613 - 153689 1842 358 aa, chain + ## HITS:1 COG:NMA0009 KEGG:ns NR:ns ## COG: NMA0009 COG1005 # Protein_GI_number: 15793043 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Neisseria meningitidis Z2491 # 1 358 1 358 358 590 99.0 1e-168 MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLR VGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEE WVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVC VVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIFIVYLISAVAETNRAPFDVAEGE SEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSLMFLGGWLSPFPQSWGFIGTPSAFW MFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKVLIPIGFAYIVILGVWMISPLNLWK >gi|241318756|gb|ACQV01000030.1| GENE 145 153765 - 154160 429 131 aa, chain + ## HITS:1 COG:AGc2344 KEGG:ns NR:ns ## COG: AGc2344 COG3791 # Protein_GI_number: 15888600 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 130 10 140 142 84 36.0 5e-17 MKAQCLCGAVSLETAENRELHACHCGKCRVWGGGASFTLAAQSPEITGSEHIAHYQSSEW AQRCFCKHCGTHLFVKVGNDYYINAGLFADNAGFETTSQIFIDCKAPYYDLANDTPKLTE AEFLEMVGAAG >gi|241318756|gb|ACQV01000030.1| GENE 146 154215 - 154694 635 159 aa, chain + ## HITS:1 COG:NMA0008 KEGG:ns NR:ns ## COG: NMA0008 COG1143 # Protein_GI_number: 15793042 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Neisseria meningitidis Z2491 # 1 159 1 159 159 317 100.0 7e-87 MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRFRGLHAQRRYPNGEERC IACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFCGFCEEACPTDAIVETHIF EYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR >gi|241318756|gb|ACQV01000030.1| GENE 147 154706 - 155377 976 223 aa, chain + ## HITS:1 COG:NMB0253 KEGG:ns NR:ns ## COG: NMB0253 COG0839 # Protein_GI_number: 15676177 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Neisseria meningitidis MC58 # 1 223 1 223 223 356 95.0 2e-98 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD QVKVRADQGRMRLVKMEAVKPQVKSFEENEVSDDLKPKEEGKA >gi|241318756|gb|ACQV01000030.1| GENE 148 155374 - 155679 527 101 aa, chain + ## HITS:1 COG:NMA0005 KEGG:ns NR:ns ## COG: NMA0005 COG0713 # Protein_GI_number: 15793039 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Neisseria meningitidis Z2491 # 1 101 1 101 101 146 100.0 1e-35 MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVNFNFIAFSQHLGDTAGQ IFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG >gi|241318756|gb|ACQV01000030.1| GENE 149 155682 - 157706 2609 674 aa, chain + ## HITS:1 COG:NMB0257 KEGG:ns NR:ns ## COG: NMB0257 COG1009 # Protein_GI_number: 15676181 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Neisseria meningitidis MC58 # 1 674 1 674 674 1219 98.0 0 MNDMTLYLIIALVPLAGSLIAGLFGNKIGRVGAHTVTILGVAVSAVLSAYVLWGFIDGSR AKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMVHIYTIGYMHDEKVGYQRF FSYISLFTFSMLMLIMSNNFIQLFFGWESVGLVSYLLIGFYFKRPSATFANLKAFLINRV GDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQTATIQLFPGVEWSLITVTCLLLFVGAM GKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGLFMVSRMSPIYEMSSTALSVIMVIG AITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGASAYSVAMFHVMTHAFFKALLFL AAGSAIIGMHHDQDMRHMGNLRKYMPVTWLTMLIGNLSLIGTPFFSGFYSKDSIIEAAKY STLPGSGFAYFAVLASVFVTAFYAFRQYFMVFHGEEKWRSLPEHHDDHHGEEHHGLGKND NPHESPLVVTLPLILLAIPSVIIGYVAIEPMLYGDFFKDVIFVNADAHPTMHIMKEEFHG ALAMVSHSLHSPVLYLAIAGVLSAWLLYVKLPHLPAKIAQAFRPIYVLFENKYYLDALYF NVFAKGTRALGTFFWKVGDTAIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFG VLVLLGMTFWGLFR >gi|241318756|gb|ACQV01000030.1| GENE 150 157802 - 159298 2143 498 aa, chain + ## HITS:1 COG:NMA2229 KEGG:ns NR:ns ## COG: NMA2229 COG1008 # Protein_GI_number: 15795098 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Neisseria meningitidis Z2491 # 1 498 1 498 498 842 98.0 0 MFSNYLLSLAIWIPIAAGVLVLATGKDSRAPLARVLAFMGALAGFLVTLPLFTQFDRLSG GYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVLAGWEVIQKRPAQYMAAFL MMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPRRVYASVKLFLYTLMGSLLML VAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFLSFAVKVPMFPVHTWLPDAHVEA PTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFAPVIIVLSLIAVIYIGMVALVQTDM KKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKGAIIQMISHGFVSAAMFMCIGVMYDRL HTRNIADYGGVVNVMPKFAAFMMLFGMANAGLPATSGFVGEFMVIMGAVKVNFWVGALAA MTLIYGASYTLWMYKRVIFGAIHNPHVAEMKDINCREFAILAILAVAVLGMGLYPQAFIE VVHQAANDLIAHVAQSKI >gi|241318756|gb|ACQV01000030.1| GENE 151 159308 - 160750 1791 480 aa, chain + ## HITS:1 COG:NMB0259 KEGG:ns NR:ns ## COG: NMB0259 COG1007 # Protein_GI_number: 15676183 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Neisseria meningitidis MC58 # 1 480 1 480 480 679 85.0 0 MNWSDLNLMPAMPEIVLLALLGVVLLADLWICDKNRYLTHLMSLGTVIIVAVTQLAVWEQ GSVDAFHGMYIADGMSRLAKLVLYALTFGLFIYSKPYNQDRQIFKGEFYTLSLFALLGMS VMVSSAHFLTAYIGLELLSLSLYAMIALRRDSGRSAEAALKYFVLGALASGLLLYGISMV YGATGSLDFASVLASAFNEQANEWLLKLGMVFIVVAIAFKLGAVPFHMWVPDVYDGAPTS VTAFVGTAPKIAAVVFAFRILVTGMGTIHSDWAPMLAILAVASLVVGNLAAIMQTNIKRM LAYSTVSHMGFILLAFMAGAVGFTAGLYYAITYALMAAVSFGVLMVLSTKDIECEDIKDL AGLNQRHAWFAFLMLLSMFSMAGIPPLMGFYAKFGVIMALLKQGYVWLSVFAVIMSLIGA FYYLRVIKVIYFDAPDHDQPVGSNYAAKFVLTVNAFLLLLWGIMPQTVIDWCAKALENTL >gi|241318756|gb|ACQV01000030.1| GENE 152 160971 - 161270 399 99 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1886 NR:ns ## KEGG: NMCC_1886 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 99 32 130 130 159 87.0 3e-38 MTASMYILLLLALIFANAPFITTKFFGIIALKRKHIGHHLIELLAGFLLTAILAYILESR AGAVHAQDWEFYATVVCLYLIFAFPCFVWRYFWNERNRE >gi|241318756|gb|ACQV01000030.1| GENE 153 161423 - 162028 522 201 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000292 NR:ns ## KEGG: ABBFA_000292 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 10 186 16 196 197 107 34.0 3e-22 MNKLLILCSALALSACVVPHPYTSTEYQKYKQSDLKIPNQPYPIRLEGEFERNGKSFPKA NPALTKAAQIALNGTKIVTVDPQAQNSLKIHANNIANIGGAVGNGIKTGLTFGLADSTVQ DYYQFYCSYSDGKKELNRSEFNHAIVTTFGLTSTPKELTPHSNLDQAFISVTKDIVVNCL GDLQNKGFLLPEAANTNAGSN >gi|241318756|gb|ACQV01000030.1| GENE 154 162458 - 162799 231 113 aa, chain - ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 108 157 265 269 102 53.0 2e-22 MLEKAAPRLTDKGTMLHSDQGVLYRTAEYRELLAQHSMIQSMSRKANCWDNAPMESFFAV LKTECFYNAGELTVDELMKQIDDYMDYYNRERCSLKLKKPSPVAHRTQLTQSA Prediction of potential genes in microbial genomes Time: Thu May 26 12:05:37 2011 Seq name: gi|241318645|gb|ACQV01000031.1| Neisseria flavescens SK114 ctg1118407793856, whole genome shotgun sequence Length of sequence - 77864 bp Number of predicted genes - 78, with homology - 74 Number of transcription units - 53, operones - 16 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 529 - 918 321 ## COG2852 Uncharacterized protein conserved in bacteria - Prom 1004 - 1063 2.9 2 2 Tu 1 . - CDS 1084 - 1341 502 ## LAR_0168 hypothetical protein - Prom 1400 - 1459 2.3 3 3 Tu 1 . - CDS 1489 - 2616 1603 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 2679 - 2738 9.0 + Prom 2664 - 2723 5.9 4 4 Tu 1 . + CDS 2950 - 6225 2653 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 + Term 6254 - 6306 13.9 - Term 6244 - 6292 7.3 5 5 Tu 1 . - CDS 6501 - 7508 1007 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 7529 - 7588 3.1 6 6 Tu 1 . - CDS 7638 - 8372 1013 ## COG3279 Response regulator of the LytR/AlgR family - Prom 8461 - 8520 3.5 7 7 Tu 1 . - CDS 8611 - 9498 741 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Term 9550 - 9580 3.4 8 8 Tu 1 . - CDS 9651 - 10706 1682 ## COG0176 Transaldolase - Prom 10773 - 10832 3.7 + Prom 10648 - 10707 4.2 9 9 Op 1 13/0.000 + CDS 10841 - 11815 1218 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 10 9 Op 2 11/0.062 + CDS 11882 - 12418 754 ## COG1778 Low specificity phosphatase (HAD superfamily) 11 9 Op 3 12/0.062 + CDS 12415 - 12996 650 ## COG3117 Uncharacterized protein conserved in bacteria 12 9 Op 4 19/0.000 + CDS 12977 - 13507 848 ## COG1934 Uncharacterized protein conserved in bacteria 13 9 Op 5 17/0.000 + CDS 13579 - 14313 273 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 14365 - 14424 6.9 14 9 Op 6 11/0.062 + CDS 14496 - 15851 1306 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 15 9 Op 7 . + CDS 15901 - 16215 271 ## PROTEIN SUPPORTED gi|91774499|ref|YP_544255.1| SSU ribosomal protein S30P / sigma 54 modulation protein + Term 16227 - 16275 8.9 - Term 16222 - 16255 5.4 16 10 Tu 1 . - CDS 16285 - 17562 1320 ## COG0477 Permeases of the major facilitator superfamily - Prom 17584 - 17643 7.9 - Term 17768 - 17807 1.4 17 11 Op 1 . - CDS 17820 - 18005 274 ## gi|241760789|ref|ZP_04758880.1| hypothetical protein NEIFL0001_0158 18 11 Op 2 . - CDS 18084 - 18173 124 ## - Prom 18232 - 18291 6.4 + Prom 18294 - 18353 7.4 19 12 Tu 1 . + CDS 18400 - 18480 60 ## + Prom 18798 - 18857 12.0 20 13 Op 1 2/0.312 + CDS 18917 - 19402 476 ## COG1528 Ferritin-like protein 21 13 Op 2 . + CDS 19419 - 19916 461 ## COG1528 Ferritin-like protein + Term 19928 - 19974 5.5 - Term 19922 - 19957 -0.3 22 14 Tu 1 . - CDS 20088 - 21728 2306 ## COG0166 Glucose-6-phosphate isomerase - Prom 21859 - 21918 7.0 + Prom 21930 - 21989 7.3 23 15 Tu 1 . + CDS 22041 - 23024 627 ## COG1609 Transcriptional regulators + Prom 23101 - 23160 4.3 24 16 Op 1 21/0.000 + CDS 23222 - 23980 662 ## COG0477 Permeases of the major facilitator superfamily + Term 24051 - 24089 2.1 + Prom 23991 - 24050 4.3 25 16 Op 2 . + CDS 24146 - 24544 572 ## COG0477 Permeases of the major facilitator superfamily + Term 24575 - 24621 12.2 + Prom 24666 - 24725 5.8 26 17 Op 1 4/0.062 + CDS 24753 - 27056 2933 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 27 17 Op 2 13/0.000 + CDS 27126 - 28712 1871 ## COG0642 Signal transduction histidine kinase 28 17 Op 3 2/0.312 + CDS 28705 - 30333 2113 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 29 17 Op 4 . + CDS 30382 - 31134 413 ## COG0500 SAM-dependent methyltransferases + Prom 31150 - 31209 2.9 30 17 Op 5 . + CDS 31237 - 31920 1187 ## COG0588 Phosphoglycerate mutase 1 + Term 31929 - 31971 10.5 - Term 32003 - 32033 1.0 31 18 Tu 1 . - CDS 32056 - 32847 973 ## COG1651 Protein-disulfide isomerase - Prom 32927 - 32986 4.3 + Prom 32905 - 32964 5.8 32 19 Tu 1 . + CDS 33193 - 35172 1369 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase + Term 35199 - 35251 8.2 - Term 35194 - 35232 7.1 33 20 Tu 1 . - CDS 35253 - 35927 795 ## NMCC_0504 hypothetical protein - Prom 36156 - 36215 7.0 - Term 36215 - 36254 -1.0 34 21 Tu 1 . - CDS 36258 - 36596 619 ## COG0316 Uncharacterized conserved protein - Prom 36616 - 36675 3.9 35 22 Tu 1 . - CDS 36729 - 37415 912 ## COG2932 Predicted transcriptional regulator - Prom 37462 - 37521 7.2 + Prom 37504 - 37563 6.6 36 23 Tu 1 . + CDS 37677 - 37952 396 ## NGK_1687 hypothetical protein + Term 37969 - 38025 10.5 - Term 37963 - 38006 7.5 37 24 Tu 1 . - CDS 38029 - 39075 1337 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 39193 - 39252 3.5 - Term 39197 - 39235 6.2 38 25 Op 1 . - CDS 39254 - 39925 413 ## gi|241760823|ref|ZP_04758914.1| hypothetical protein NEIFL0001_0178 39 25 Op 2 . - CDS 39929 - 40177 141 ## gi|225076030|ref|ZP_03719229.1| hypothetical protein NEIFLAOT_01057 - Prom 40298 - 40357 3.8 - Term 40741 - 40780 5.2 40 26 Tu 1 . - CDS 40876 - 42588 2323 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components - Prom 42714 - 42773 2.4 41 27 Tu 1 1/0.312 - CDS 42826 - 45045 2497 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 45107 - 45166 2.3 - Term 45078 - 45129 15.1 42 28 Tu 1 . - CDS 45238 - 47445 2702 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 47547 - 47606 8.2 + Prom 47849 - 47908 6.2 43 29 Op 1 . + CDS 47997 - 48281 358 ## COG0560 Phosphoserine phosphatase 44 29 Op 2 . + CDS 48314 - 48826 508 ## COG0560 Phosphoserine phosphatase + Term 48846 - 48907 20.0 45 30 Tu 1 . - CDS 48898 - 49605 1081 ## COG2908 Uncharacterized protein conserved in bacteria - Prom 49628 - 49687 3.5 - Term 49713 - 49753 9.8 46 31 Tu 1 . - CDS 49762 - 51147 1639 ## Pput_4813 LmbE family protein - Prom 51275 - 51334 7.7 - Term 51300 - 51358 18.0 47 32 Op 1 3/0.062 - CDS 51387 - 53195 2717 ## COG0173 Aspartyl-tRNA synthetase 48 32 Op 2 2/0.312 - CDS 53260 - 53961 911 ## COG2928 Uncharacterized conserved protein - Prom 53992 - 54051 4.6 49 33 Tu 1 . - CDS 54113 - 55255 1514 ## COG2829 Outer membrane phospholipase A 50 34 Tu 1 . - CDS 55423 - 55686 415 ## PROTEIN SUPPORTED gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 - Prom 55719 - 55778 5.9 + Prom 55856 - 55915 6.5 51 35 Tu 1 . + CDS 55995 - 57137 1794 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 57160 - 57203 11.7 - Term 56934 - 56980 -1.0 52 36 Op 1 . - CDS 57207 - 57800 293 ## gi|241760800|ref|ZP_04758891.1| hypothetical protein NEIFL0001_0197 53 36 Op 2 . - CDS 57832 - 58206 149 ## gi|241760833|ref|ZP_04758924.1| hypothetical protein NEIFL0001_0198 - Prom 58228 - 58287 4.5 + Prom 58174 - 58233 1.8 54 37 Tu 1 . + CDS 58253 - 58336 164 ## - Term 58231 - 58270 -0.9 55 38 Tu 1 . - CDS 58341 - 58448 79 ## - Prom 58627 - 58686 4.5 - Term 58629 - 58662 -0.4 56 39 Tu 1 . - CDS 58766 - 59197 712 ## COG2510 Predicted membrane protein - Prom 59284 - 59343 3.6 + Prom 59243 - 59302 6.9 57 40 Tu 1 . + CDS 59377 - 61053 2739 ## COG2759 Formyltetrahydrofolate synthetase + Term 61076 - 61127 15.2 - Term 61062 - 61114 17.0 58 41 Op 1 . - CDS 61119 - 61361 337 ## gi|261379274|ref|ZP_05983847.1| glycosyl transferase, group 2 family 59 41 Op 2 11/0.062 - CDS 61325 - 61819 403 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 60 41 Op 3 . - CDS 61842 - 62048 258 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 62081 - 62140 2.0 - Term 62101 - 62156 15.5 61 42 Tu 1 . - CDS 62177 - 63241 1843 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 63279 - 63338 10.3 + Prom 63273 - 63332 7.0 62 43 Op 1 . + CDS 63392 - 63820 263 ## Dbac_1354 esterase 63 43 Op 2 . + CDS 63822 - 64718 735 ## COG4973 Site-specific recombinase XerC + Term 64730 - 64778 15.2 + Prom 64896 - 64955 4.7 64 44 Tu 1 . + CDS 65071 - 66000 775 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Prom 66020 - 66079 4.4 65 45 Op 1 30/0.000 + CDS 66103 - 66762 845 ## COG0811 Biopolymer transport proteins 66 45 Op 2 . + CDS 66766 - 67203 800 ## COG0848 Biopolymer transport protein + Term 67215 - 67276 16.4 67 46 Op 1 . + CDS 67764 - 68996 1460 ## COG0644 Dehydrogenases (flavoproteins) + Term 69025 - 69060 5.1 68 46 Op 2 . + CDS 69080 - 69931 799 ## COG0294 Dihydropteroate synthase and related enzymes + Term 70101 - 70158 15.5 + TRNA 70025 - 70100 81.9 # Met CAT 0 0 - Term 70588 - 70636 13.3 69 47 Tu 1 . - CDS 70729 - 71187 558 ## COG1959 Predicted transcriptional regulator - Prom 71313 - 71372 5.5 + Prom 71225 - 71284 3.5 70 48 Op 1 . + CDS 71334 - 71714 291 ## NMCC_1708 hypothetical protein + Term 71729 - 71773 11.1 + Prom 71722 - 71781 3.4 71 48 Op 2 . + CDS 71801 - 72958 933 ## COG3213 Uncharacterized protein involved in response to NO + Term 72973 - 73021 13.0 - TRNA 73061 - 73135 64.6 # Arg CCT 0 0 - Term 72964 - 73003 9.1 72 49 Op 1 1/0.312 - CDS 73154 - 73600 565 ## COG2707 Predicted membrane protein 73 49 Op 2 . - CDS 73605 - 74579 1533 ## COG0142 Geranylgeranyl pyrophosphate synthase - Prom 74748 - 74807 5.1 + Prom 74734 - 74793 8.6 74 50 Op 1 32/0.000 + CDS 74830 - 75150 522 ## PROTEIN SUPPORTED gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 75 50 Op 2 2/0.312 + CDS 75178 - 75450 462 ## PROTEIN SUPPORTED gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 + Term 75463 - 75509 10.3 + Prom 75574 - 75633 6.2 76 51 Tu 1 . + CDS 75725 - 76909 1596 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 76927 - 76970 7.5 - Term 76915 - 76958 7.5 77 52 Tu 1 . - CDS 76977 - 77654 644 ## COG1738 Uncharacterized conserved protein 78 53 Tu 1 . - CDS 77755 - 77862 175 ## COG0780 Enzyme related to GTP cyclohydrolase I Predicted protein(s) >gi|241318645|gb|ACQV01000031.1| GENE 1 529 - 918 321 129 aa, chain - ## HITS:1 COG:NMA0605 KEGG:ns NR:ns ## COG: NMA0605 COG2852 # Protein_GI_number: 15793595 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 129 1 129 129 229 92.0 7e-61 MNPPEKLLTADNPALRQRAKAMRQEMSEAEAKLWQHLRAGRLNGYKFRRQQPIGNYIVDF MCVTPKLIVEADGGQHTEQAAYDHARTAHLNSLGFTVLRFWNHEILQQTNNVLAEILRVL QELEKQPAR >gi|241318645|gb|ACQV01000031.1| GENE 2 1084 - 1341 502 85 aa, chain - ## HITS:1 COG:no KEGG:LAR_0168 NR:ns ## KEGG: LAR_0168 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 4 83 24 103 106 110 67.0 1e-23 MTEKQMRVLSVVATLTAVGMYVSYIPQIQNNLAGNPGSPLQPLVAAINCTLWVAYGFLKE KRDYPVMLANAPGIILGLITFITSF >gi|241318645|gb|ACQV01000031.1| GENE 3 1489 - 2616 1603 375 aa, chain - ## HITS:1 COG:NMA0608 KEGG:ns NR:ns ## COG: NMA0608 COG0505 # Protein_GI_number: 15793598 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Neisseria meningitidis Z2491 # 1 375 1 375 377 741 96.0 0 MTTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHI GNTGTNAEDEESGSVYAAGLIIRDLPLLHSNFRASESLHDYLVHNKTVAIADIDTRRLTT LLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCKEAYEWTEGEWALGKG FVTPAEQPFHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPG DPEPCTYAIEAVQKLMASGKPIFGICLGHQLISLAIGAKTLKMHFSHHGANHPVQDLDSG KVVITSQNHGFAVDADTLPANARITHKSLFDNTLQGIELTDKPVFCFQGHPEASPGPQDV GYLFDKFIDNMKAAK >gi|241318645|gb|ACQV01000031.1| GENE 4 2950 - 6225 2653 1091 aa, chain + ## HITS:1 COG:NMA0609 KEGG:ns NR:ns ## COG: NMA0609 COG3419 # Protein_GI_number: 15793599 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Neisseria meningitidis Z2491 # 361 1091 318 1037 1037 362 35.0 3e-99 MLESHSEKIKTTSLSVNRRFYENERIMKNKSSRCPGSIRPMIYNIASALALMSGVANAAA GEFAKVPLYLQTESKIDKQPEVKHNIMLFIDDSGSMDEYIGSKTRIQITKDALSKVLEEH GSTFNWALQTLNNSGGSDTPDAKGFTIPATEIANRVKRIKAKGGTPTTSRYFELVSQIVM PNVKYRCQKSYVVLMSDGDANLSCGLDNTGYKWPKSDFKYGDLSRYSDYYRRNISREEPK YREAYNYFGYRQAGSCQKRELGAYDTSWDIDDGLAFFSKKLAEQDFKTDGTDAAGKSWNG DPKDPADYSKQLVQTFTVGFGQGITPTGKRYLQLAASRPEYYYEADKPESLSKVFNDIVE QIKSGTKNVGYDDVGATAPATTSSSLPEMSAVIGLKTNSWSSQIIFQRLGKDGRRSEELK LYPSFANRKTLINTGSSTYFINNIPNNTLNNAYFDIADAANGKNSDEWRDLLNWTGRIGD DKSIQDKSKNTPYSQVYRIREGDQRDLGDILDGSVAAVGKDKYKVGNDTIKRQKYMVAAA NDGMVHLFQTSSDANHPYELKVSYIPSTMERDVADGNNVKTVTLAKVLKNIAKDSYTSSI TNHEYMVNGGFTLRQTSENDTQRVFMFGAMGQGGRGAYALNIGGNVDKATKTGLDVTDTE WNKTVPLFETIKGEKNTLGYTIGTPQIGRVSVSRPADNGRVDIKENIRYAGFLASGYRVE DKADTKNETALYVYEMLGKEVGTGDKRGNDTGKAPGDLLKKIEVQDGVGGLSTPTLVDTD FDGVIDVAYAGDRGGNMYRFDLRGEKPDNWKVVKIFTGSPSKPITSAPAVSRRRANEYVV IFGTGSEIYQNDLTNKDKQSIYGIYEDLTPNQTVTAASESDLQQQEFRPEEKGKEGYIYL TNNQVAKTQKGWKIDLRDGERVNVKPTMILRTAVVTVRRYDSVTEEKSAGADVCLPASTS VKTAAKTSFIGVNADNGGALNARSARFTPDTVIRKLDGFGMQYANGLTQDGVINFTFLNP SKLDDSPVTADGDSGGTGTDKELSVTSSTPNNKCFSNKVTRSLLLNKGESLAVEGGRICG LKRISWRELFF >gi|241318645|gb|ACQV01000031.1| GENE 5 6501 - 7508 1007 335 aa, chain - ## HITS:1 COG:NMA0221 KEGG:ns NR:ns ## COG: NMA0221 COG3039 # Protein_GI_number: 15793244 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis Z2491 # 1 335 1 335 335 623 92.0 1e-178 MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSM FKAVLLGQWHSLSDPELEHSLITRVDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL LELINRQLTEKNLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDKDAR WTKKNGLYRLGYKQHTRTDEEGYIEKLHITPANTHECKHLSPLLESIAEGTTVYADKGYD SKENRQHLKEHQLLDGIMRKAHRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR AAYFGLLKVSAQSHLKAMCLNLLKAANRLSVPVCA >gi|241318645|gb|ACQV01000031.1| GENE 6 7638 - 8372 1013 244 aa, chain - ## HITS:1 COG:XF1626 KEGG:ns NR:ns ## COG: XF1626 COG3279 # Protein_GI_number: 15838227 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Xylella fastidiosa 9a5c # 1 231 1 233 252 109 37.0 6e-24 MPSAIIVEDEVLAAERLRVLLEECNVVLLNVFHHAMPALEWLSVHEVDIVFADIGMPEID GLEFVERIKRTAKRQPEIVFTTAYEEHALRAFELAAADYLLKPIKMTRLQTALDRIIEKN REKADSFTHFKVYNRERMVEIPWQQARYLMAEHKTVYLFTGDGHSYELPKTLVYWEELLG DKVIRIHRNALVFRHTLDSLIRLDDDENDEYASTWGAKILDIPTPLPVSRRQLSTLRKII KNSI >gi|241318645|gb|ACQV01000031.1| GENE 7 8611 - 9498 741 295 aa, chain - ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 1 292 1 292 295 501 82.0 1e-142 MYIGRFAPSPTGLLHIGSLLTAVASYADARVHQGKWLVRIEDLDPPREMPGAAADILRTL EAFGFEWDGEVAYQSRRYDLYQDTLDRLKTARLVYPCYCSRKDWQAAATHGADGFVYNGR CRNPQQRPDTQNKTPAWRIQVPDRMIGFSDGIVGHYAQNLTHDIGDFVLLRADGYWAYQL AVVADDADQGITHIVRGQDLLVSTPRQIYLQQCLGVPTPAYAHLPLLTNSQGQKWSKQTL APALDLNQKEQLLRQVLTYLNLPDAPAVNHPQELLDWAVVHWQMDKIPKSSIITD >gi|241318645|gb|ACQV01000031.1| GENE 8 9651 - 10706 1682 351 aa, chain - ## HITS:1 COG:NMB0351 KEGG:ns NR:ns ## COG: NMB0351 COG0176 # Protein_GI_number: 15676266 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Neisseria meningitidis MC58 # 1 351 1 351 351 577 92.0 1e-164 MTILSDVKALGQQIWLDNLSRSLVQSGELAEMLKQGVCGVTSNPAIFQKAFAGDTLYADE VAALKQQDLTPKQRYETMAVADVQVACDVCLAEHESTGGKTGFVSLEVSPELSKDAQGTV EEARRLHAAIGRKNAMIKVPATDEGIEALETLVSDGISVNLTLLFSRVQTLKAYAAYAHG IAKRLKAGHDVSHIQVVASFFISRVDAALDTTLPDHLKGKVAIALAKAAYQDWAQYFGSS EFAALAEKGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAK ATLTEGTDEAQAQLAETAKLGIDVETLATCLQEDGLKQFEEAFAKLLAPLA >gi|241318645|gb|ACQV01000031.1| GENE 9 10841 - 11815 1218 324 aa, chain + ## HITS:1 COG:NMB0352_1 KEGG:ns NR:ns ## COG: NMB0352_1 COG0794 # Protein_GI_number: 15676267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Neisseria meningitidis MC58 # 1 207 1 207 207 344 91.0 1e-94 MAENTLYLDWARDVLDTEAEGLREIAAALDHDFVRAAEALLHCKGRVVITGMGKSGHIGR KMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNIT LICITAHPTSTMARHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFT PDDFALSHPAGSLGKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDA EGRLKGVFTDGDLRRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGL LVVEENGVLIGALNMHDLLMARIV >gi|241318645|gb|ACQV01000031.1| GENE 10 11882 - 12418 754 178 aa, chain + ## HITS:1 COG:NMA2134 KEGG:ns NR:ns ## COG: NMA2134 COG1778 # Protein_GI_number: 15795005 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Neisseria meningitidis Z2491 # 1 178 1 178 178 305 85.0 3e-83 MQNLSSDLQQRALGIKLLILDVDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQ TAIITGRDAPSVGIRVKQLGINYYFKGIHDKRAAYAQLREQAGVEEHECAFVGDDVVDLP VMVRCGLAVAVPEAHWFTLQYAHYVTRRSGGAGAVREVCDLIMQAQGTLEPALKEYVR >gi|241318645|gb|ACQV01000031.1| GENE 11 12415 - 12996 650 193 aa, chain + ## HITS:1 COG:NMB0354 KEGG:ns NR:ns ## COG: NMB0354 COG3117 # Protein_GI_number: 15676269 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 1 193 1 193 193 287 68.0 7e-78 MKIRWRYGIAFPLVLAVSLGALAAWLGRISEVQVEEVVLNPNEPQYSMKGINGKRFDQEG RLKENLSAVDAVQYPNSADVHLDKPHLSFYRDGSLLYEVGSDKAAYNIQNKKVVFEQNVV LNKAADAKRLAGIVKTERLNVDTEAQYAHTDSPVTFQYGQSGGQANGMTYDHKTGLLNFP SKVKATIYDTKNL >gi|241318645|gb|ACQV01000031.1| GENE 12 12977 - 13507 848 176 aa, chain + ## HITS:1 COG:NMA2132 KEGG:ns NR:ns ## COG: NMA2132 COG1934 # Protein_GI_number: 15795003 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 176 1 176 176 208 76.0 4e-54 MIQKICKTLAFVTVFAASPAFALQSDSKQPIQIEADQGSLDQNNQSTTFSGNVIIKQGTL NIRAGSVTVSRNDKSEQLMKATGSPVKFSQELDGGKGVVNGQANTVTYSSAASLVTLTGN AKVQRGGDVAEGAVITYNTKTEVYTINGSAKSGVKSAAKSGRVSVVIRPSSTQKNK >gi|241318645|gb|ACQV01000031.1| GENE 13 13579 - 14313 273 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 232 4 231 245 109 28 4e-23 MSANNSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAAD AGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQNIRAILEISMKDKSRIDAE LEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMQPRFILLDEPFAGVDPIAVIDIQ KIIEFLKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDLVNNEQVRSVYLGE NFKY >gi|241318645|gb|ACQV01000031.1| GENE 14 14496 - 15851 1306 451 aa, chain + ## HITS:1 COG:NMB0217 KEGG:ns NR:ns ## COG: NMB0217 COG1508 # Protein_GI_number: 15676143 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Neisseria meningitidis MC58 # 1 246 1 243 283 303 64.0 4e-82 MSSLVLKLKQTQQLNQRLQQSLRILQMSGLELEREVEDWLLDNPLLERPETDEFADSGLN RTVTMPRAGQQLSGDDAEDIWSNIAEEEDFKHYLHAQVCEHPLSQVEAAYVHVLIDFLGE QGYLTDSLEEIIDHTPLEWMLDEEALQNAQDILQTFDPPGVAAADLTESLMLQLMRLPAS PARQMAAHLVQSSLQDLGKNRKQNVLRFRKLYPDTDSETIEAALDMIAELNPYPAYGFAS ATPTPYIQPDVWVKEGKDGWEVISNEAAWPKLQLNQEYCDLMKSAEEGALGWKEKINEAK QRIDSLELRKSTVLRLAEYIVKNQEDFFIFGEIGLSPMLMKDAAAELGLAESTISRAANQ KYLSCPRGLFALRYFFTQAVNADDDGEGFSQGAIKAVLSQLIESEDSSKPYSDETLVKLL KQRGIEIARRTVAKYRESLDIPPAHKRKFTE >gi|241318645|gb|ACQV01000031.1| GENE 15 15901 - 16215 271 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|91774499|ref|YP_544255.1| SSU ribosomal protein S30P / sigma 54 modulation protein [Methylobacillus flagellatus KT] # 1 91 1 91 108 108 57 7e-23 MNLKITGLNFDVTEAIKNYVSDKLARINRHADNIISVTITLSVEKVNQKAEADAHLAGKD LHVEAIEQDMYAAIDVLMDKLDRAVLKHKEKSGDVRSTVKPEAE >gi|241318645|gb|ACQV01000031.1| GENE 16 16285 - 17562 1320 425 aa, chain - ## HITS:1 COG:NMB0360 KEGG:ns NR:ns ## COG: NMB0360 COG0477 # Protein_GI_number: 15676275 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis MC58 # 3 425 2 424 427 601 77.0 1e-172 MTTAPQTSTWRKIFSRSMLICIFTGFTSGLPLYFLINLIPAWLRSEHVDLKTIGLMALIG LPFTWKFIWSPVIDLVRLPFLGRRRGWMLVTQIGLLLTLLIYAFLNPAQHLYVIMGLSLV VAFFSASQDIVLDAFRREILSDEELGLGNSIHVNAYRIAALVPGSLSLILADLMPWHNVF IITALFMLPGLLMTLFLAKEPDTPPSASRTFAQTVSDPFSEFFSRKGIKQAILVLLFIFL YKLGDSMATSLATPFYLDMGFSKTDIGLIAKNAGLWPAVIAGIVGGIWMIKLGINRALWI FGVAQWVTILGFAWLANFGKFETITLAEQMMLAAVIGAEAAGVGLGTAAFVAYMARETNP AFTATQLALFTSLSAVPRTFINASAGYLIEAMGYFNFYWLCFALGIPGMLLLFKVAPWNG EKVNN >gi|241318645|gb|ACQV01000031.1| GENE 17 17820 - 18005 274 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760789|ref|ZP_04758880.1| ## NR: gi|241760789|ref|ZP_04758880.1| hypothetical protein NEIFL0001_0158 [Neisseria flavescens SK114] # 1 61 1 61 61 69 100.0 5e-11 MVGGTIGAAVGAAVGAATGMGVAAYEYYQETQPKGTVTVGPISAFAVDKSGNGYTDGTNY H >gi|241318645|gb|ACQV01000031.1| GENE 18 18084 - 18173 124 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIELSIEDLELIYGGGLGERILQGGANGA >gi|241318645|gb|ACQV01000031.1| GENE 19 18400 - 18480 60 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKIYPNQLSNQLPNFFMLSLIEVNQ >gi|241318645|gb|ACQV01000031.1| GENE 20 18917 - 19402 476 161 aa, chain + ## HITS:1 COG:HI1384 KEGG:ns NR:ns ## COG: HI1384 COG1528 # Protein_GI_number: 16273293 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Haemophilus influenzae # 1 161 21 181 182 253 81.0 8e-68 MLSKSITAKLNEQINLELYSSNVYLQMSAWCHKHGYEGAAAFLLRHADEELEHMQKLFTY VSETSGMPLLGKIDAPKHDYASLKEVFETTLEHEKLVTSKINELVESTFAEKDYSTFNFL QWYVAEQHEEEKLFNSIVDKFKLLGESGTALYYIDRELKTL >gi|241318645|gb|ACQV01000031.1| GENE 21 19419 - 19916 461 165 aa, chain + ## HITS:1 COG:PM0667 KEGG:ns NR:ns ## COG: PM0667 COG1528 # Protein_GI_number: 15602532 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Pasteurella multocida # 1 164 1 164 165 258 84.0 2e-69 MLSNSVIKLLNDQMNLEFYSSNLYLQMSAWCEQQGFEGAAKFLSEHAAEEMQHMRKLFTY LNETGALAIITQIDEPPHQFSSLKQVLELTYEHEKLITSKINELVGRTFEEKDYSAFNFL QWYVAEQHEEEKLFSGILDKLNLLGEDGKGLFLVDKDLGALTTNN >gi|241318645|gb|ACQV01000031.1| GENE 22 20088 - 21728 2306 546 aa, chain - ## HITS:1 COG:NMA2154 KEGG:ns NR:ns ## COG: NMA2154 COG0166 # Protein_GI_number: 15795025 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Neisseria meningitidis Z2491 # 1 542 1 542 547 803 69.0 0 MSAYSDAWQALEAHHADTQHVTLRERFAADAERFNNMHEILHGLLFDYSKNRLDENTLDL LCQLAEAADLSQYMRAMSSGEKINTSEHRAVLHTALRLPANAKPVYVDGENIVPNIHHEL NRALEFARQLLDGTHAGITGKPITDLVHIGIGGSDLGPRMATQALQPYWQNIRVHFVSNS DDADLTQTLLGLNPETTVFSIASKSFRTPETLLNAYAARTWYRDAGLPDSGIYRHFCAIS ADVAAAQNFGISPDKVFAMSDWVGGRYSVWSPIGLPLMVAVGEKAFRKMLAGAHAMDTHF FETPFRRNIPVLMALINVWYNNFQHSDGQTVVPYSHNMRLFTPWLNQLDMESLGKQRTSD GQPVSCTTGGIVFGDEGVNCQHAYFQLLHQGTRLIPVDFIVPMTTVYGNHRQHRFTVANA FAQAEALMKGKTLDEVQIELAALPQDERDRLAPQKEFPGNRPSNSLLIDSLTPFNLGMLM AAYEHRTFVQGVIWRINPFDQWGVEYGKELAKTIEPELERGTPAHDSSTNGLIAFYRNCN ARSKAV >gi|241318645|gb|ACQV01000031.1| GENE 23 22041 - 23024 627 327 aa, chain + ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 8 310 27 317 341 152 35.0 6e-37 MINSDAPVSEKTRSKVETAIAALGYIPSSAARIMRSHRSGLVGLITGAISRIGESTGGHG IPDMFLIKGIQQQIRAQGKILMIADIDNKLGQPGQMEPLIRTFMEHRAEGILYVAGFHQE VLLPEVPNRCPMVLVNCFDSVGTPAVLPDDEAGQYGLVRRIIQSGHKRIAYVTLQPGVEA TRLRLAGYRRALADSDIVFDPDLVQTGYPDFSNDSGSLISAILKLLSLPLPPMVICCGND EMAVRVYGILRTRGMRVPEQVSVAGYDNHSAIAETLFPPLTSTELPYLRMGAMAADLLFQ HIEHPTGSVQSVKVVGETIWRQSVINK >gi|241318645|gb|ACQV01000031.1| GENE 24 23222 - 23980 662 252 aa, chain + ## HITS:1 COG:CC2283 KEGG:ns NR:ns ## COG: CC2283 COG0477 # Protein_GI_number: 16126522 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 9 223 44 256 541 164 45.0 1e-40 MKISPQVAMTLRQIMLMNFGFFGIQYSFGLQQTAINPIFSFLHADPSQLPILNMAGPITG LLVQPMIGAMSDRTWVPGLGRRRPYFLIGAIGCSLCLFIYPHVTALWVAVLLLWLLDISN NTAMEPFRAFIADTVPEHQQSTGFLMQSVFTGLGITLANVSLYIFQQIGWLQQTSEAGIP YWVFGSFYIGAVCSIGSVLVTVLTTPEREPSPQEMAAIKAQPRGPVHAVKEIFSAIKEMP KPLWQLASVYLF >gi|241318645|gb|ACQV01000031.1| GENE 25 24146 - 24544 572 132 aa, chain + ## HITS:1 COG:CC2283 KEGG:ns NR:ns ## COG: CC2283 COG0477 # Protein_GI_number: 16126522 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 3 105 413 515 541 59 34.0 1e-09 MWMARKYAAKYVHAFAVTLAALALLTIPHIGNKYLMFAPMIGFGVGWASMMGVPFMIMVG SIPKERYGVYMGIVNMMIVIPMLIETVSFGWVYKTFLGSNPANAMTFAGVFLAIAAALTL TIKTAAKPATTE >gi|241318645|gb|ACQV01000031.1| GENE 26 24753 - 27056 2933 767 aa, chain + ## HITS:1 COG:NMA1802 KEGG:ns NR:ns ## COG: NMA1802 COG0188 # Protein_GI_number: 15794693 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Neisseria meningitidis Z2491 # 8 767 3 762 765 1341 91.0 0 MTEHISAPSPSPIGEDYLLLGQYAERAYLEYAMSVVKGRALPEVSDGQKPVQRRILFAMR DMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTLRYPLIDGIGNFGSRD GDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEPLHLPARLPMVLLNGASG IAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPAPDFAGGGQIITPADELRRI YETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLN QDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSLEGNVSMN LVMMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLKFRLNQVEKRLHILEGRLKVFLHIDE VIKVIRESDDPKADLMAAFGLTEIQAEDILEIRLRQLARLEGFKLEKELNELREEQGRLN ILLGDENEKRKLIIKEMQADMKQFGDARRTLVEEAGRAVLTQTTADEPITLILSEKGWIR SRAGHNLDLSQTAFKEGDRLKQTLEGRTVLPVVILDSLGRTYTLDAAEIPGGRGDGVPVS SLIELQNGAKPVAMLTGQPEQHYLLSGSGGYGFITKLADMVGRVKAGKVVMTVDSGETVL PPVAVYASSLINPDCKVVLASSNHRLLAFSIGELKVMPKGRGLQLMSLAEGASLEHIMVT TSPEFTVVSVGRRGAEHQEKLRIADIDGKRGKKGKVLEISGHLKSLS >gi|241318645|gb|ACQV01000031.1| GENE 27 27126 - 28712 1871 528 aa, chain + ## HITS:1 COG:NMA1803 KEGG:ns NR:ns ## COG: NMA1803 COG0642 # Protein_GI_number: 15794694 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Neisseria meningitidis Z2491 # 4 492 4 491 505 472 49.0 1e-133 MNRANLQELGNLRERIPGVINIARIAIVLPLLVLHAFGSYTGGNLIGVSLPDVAFYIWVT LYFFLIMLSVFRPDWQWQSLDLPNASAVVDITMMMVLVYISGGTASGFGILVLPFVATSC LLSYGHYPMLYAGYTAMLFILNLFLDGSMRFDSFNWDAKSMANSLMLIGAGYLVAMLTSF AARYLEQATESASRHQLAYRRISGLNHLVLNRVQEAVVVIDATQRVWLFNKQAKIYFPSL IIDQQEIVFGELVARWQRQPDKPFETDIHIFQHAMHVRAVPLIQEQTELLMLYVRSLREV AAEAMSTKLTSLGQLTANLAHEIRNPMSAIRHASDLLQEGNEADALKAKLYNIIDSNIQR IDKMLEDVSLFNKRDNISRQPINLMKFWLEFKQEFTLNNPDAIGCLRMNMDGNNLTVLVD PMHLQQVMWNLCNNAWRHSRQDENAITVLIRPSGRMHISIVVADNGKGVPPDVRNHLFEP FYTTEKQGTGLGLYVARELAHANMGQLHYHPEMNGFELILPKEQARDE >gi|241318645|gb|ACQV01000031.1| GENE 28 28705 - 30333 2113 542 aa, chain + ## HITS:1 COG:PA4547 KEGG:ns NR:ns ## COG: PA4547 COG2204 # Protein_GI_number: 15599743 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Pseudomonas aeruginosa # 210 542 134 445 445 325 54.0 1e-88 MNKLQEPVLVVDDEADIRDLMEMTLMKMGLRVDTAAGVEEAKDKLDSNDYSLVLTDMRMP DGSGLEVVQHIDELMLDTPVAVITAFGNADQAVEALKAGAFDYLQKPITLSQLRSLVKSA VSVSDNTAEPTPSEKVKSQPVPVSAALYKPEPQPAKPVVTPPKSVQSEFNRPLIVPEGLN SLKERFSAGSINPALQQDAPILEGEDDMPRLLGTSPQMVEVRHLIRRLAHSLVPVYISGE SGTGKEQAARTIHELSDRADKPFIAVNCGAIPENLMESEFFGYKKGSFTGADQDRLGFFQ HADGGTLFLDEVADLPLAMQVKLLRAIQEKAVRRIGDARETSVDVRIICATHKNLEALVE SGAFRQDLYYRLNVVTLHMPPLREMREDLGALILYLLYKHRHGNQTYKLSPKAQEALLHY SYPGNFRELENILERAVALTVGQVIQVDDLQIQNAPQVKAERSGFSFDDIAEPDARETTL NHSPIPPFDPRTMQIQDYLDQVERSIIEQALQQTRYNRTQAAKLLGISFRSMRYRMERLD IN >gi|241318645|gb|ACQV01000031.1| GENE 29 30382 - 31134 413 250 aa, chain + ## HITS:1 COG:NMA1806 KEGG:ns NR:ns ## COG: NMA1806 COG0500 # Protein_GI_number: 15794696 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 1 244 1 244 250 315 65.0 6e-86 MYKIYFDETSSTELRSLAAPFGLTVINRQPEEGSFLIADESGISLCRAGEKGRVRVDFDG GAAHYRRTKSGGELIAKAVNHTTQPTVWDATGGLGRDSFVLASLGLKVQTFEQNPAVACL LSDGLNRAGQSEETREIAQRITLHFGNAVDLMQKLATQKGRPDVVYLDPMYPERRKTAAV KKEMAYFHDLVGAAQDEAELLDAALNTAKKRIVVKRPRLGEFLDGRKPAYQYTGKSTRFD VYLPTRPSED >gi|241318645|gb|ACQV01000031.1| GENE 30 31237 - 31920 1187 227 aa, chain + ## HITS:1 COG:NMB1604 KEGG:ns NR:ns ## COG: NMB1604 COG0588 # Protein_GI_number: 15677454 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Neisseria meningitidis MC58 # 1 227 1 227 227 434 94.0 1e-122 MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKEKGYEFDIAFTSVLTRA IKTCNIVLEESDQLFVPQIKSWRLNERHYGQLQGMDKKQTAEKYGDEQVHIWRRSYDTLP PLLDPKDPHSAHNDRRYANLPSDVVPDGENLKVTLERVLPFWEDQIAPAILSGKRVLVAA HGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDENLKVIEKFYL >gi|241318645|gb|ACQV01000031.1| GENE 31 32056 - 32847 973 263 aa, chain - ## HITS:1 COG:NMA0730 KEGG:ns NR:ns ## COG: NMA0730 COG1651 # Protein_GI_number: 15793706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Neisseria meningitidis Z2491 # 1 263 1 260 260 438 82.0 1e-123 MKTKLIKILTPFAVLPLLACGQPAVSNANAAPAPAAKAEAPADKSVAASLKARLEKVYAA QDLKVLSVNETPIKGIYEVVVSGKQIIYTDAKGDYMLVGDLINVNTRQSMTEERAADLNK IDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPYCKRLEHEFEKMTDITIYTFMMPIPSLH PDAARKAELLWCQPNPTQAWIDWMRKGKLPSGKANCENPVAETTSLGEQFGFNGTPTVVF PNGRSQSGYSPMPHLKEIIEKNQ >gi|241318645|gb|ACQV01000031.1| GENE 32 33193 - 35172 1369 659 aa, chain + ## HITS:1 COG:NMB0551 KEGG:ns NR:ns ## COG: NMB0551 COG1198 # Protein_GI_number: 15676457 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Neisseria meningitidis MC58 # 1 659 71 729 729 1295 96.0 0 MPQSWRDLLSFTSRYYHYPTGQAVFAALPQGLKETRAVEMPQPPLFYALNEAGRAQTPPP ARFNKKAALWDALLSGGMTMAALKQVNAQAAKLIEDWAEQGWIETTEAAKPVLRSYHGQA SHSEFVLNADQQKASDEIQTAFGKFQPFLLYGITGSGKTEVYFDAMAKVLAQGRQVLFLL PEINLTPQLLKRVENRFADVPTAVLHSQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPL PDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQSGCPVVLGSATPSLESWHKAQSGA YRLLQLTERAHTAAQLPQVDILNVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGF APALFCGDCGHTFGCPNCSAKMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAVGHG TQRVEETLRAFLPKATVVRVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFAR LNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVK AQDYAVFAENELNERQMFAMPPFGFQTAVRADAPRVADAMEFLNTAKETLAPLLPASVSQ FGAAPMLMVRLAERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDVQEA >gi|241318645|gb|ACQV01000031.1| GENE 33 35253 - 35927 795 224 aa, chain - ## HITS:1 COG:no KEGG:NMCC_0504 NR:ns ## KEGG: NMCC_0504 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 85 1 87 151 92 54.0 1e-17 MSKQEKFFDVYVSYPPNTDRERIHACLYENLPENEVESLIQALAERPQAIVAEKCTQDER ENAQHYFGYLGLDVIVRQAMELEAVEEEAVLAVNTPDPIQCPVCMTIIDELDSQECKTCH FDLTEKNELAIQRKRIEWQERISFEHKKQTEIAHKLKYEREQEEKKLRKKIRAELESQLR KELGQNPELAALAARKKTRFLLTMAIVFAVLSLLALGYIAAKFF >gi|241318645|gb|ACQV01000031.1| GENE 34 36258 - 36596 619 112 aa, chain - ## HITS:1 COG:NMA0739 KEGG:ns NR:ns ## COG: NMA0739 COG0316 # Protein_GI_number: 15793715 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 112 213 97.0 5e-56 MSDESPIIFTDSCCTKVADLIAEENNPDLKLRVFVNGGGCSGFQYGFTFDEIKNDDDFEI QKNGLTFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAETTCGCGSSFSV >gi|241318645|gb|ACQV01000031.1| GENE 35 36729 - 37415 912 228 aa, chain - ## HITS:1 COG:NMB0556 KEGG:ns NR:ns ## COG: NMB0556 COG2932 # Protein_GI_number: 15676461 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 1 228 1 228 228 397 82.0 1e-110 MDTFKDRLAFLWKDEARQAKIAADIDMTIAGFSRIWNEGGLPKSETLKKIKQLKGCSIDW LLTGEGSPFPDSEAPKATATDTLGNPVDIDEFVFVPRYDIQAAAGHGQLVGDEQPMFAMA FRRYWIENYVTRDIKNLSVISVKGDSMEGVLNDGDTILINHGQTTPRDGLYVLRLNENLL VKRLQLIPGGIVNVISANEAYPTFEIDLKNPTDDVAIIGRVEWFGRSI >gi|241318645|gb|ACQV01000031.1| GENE 36 37677 - 37952 396 91 aa, chain + ## HITS:1 COG:no KEGG:NGK_1687 NR:ns ## KEGG: NGK_1687 # Name: not_defined # Def: hypothetical protein # Organism: N.gonorrhoeae_NCCP11945 # Pathway: not_defined # 20 91 19 90 90 80 52.0 1e-14 MTRSRKNTFWVLLALVLGFFALPFGSSEAHEADGNLTASECERLGSLSLDQMDGRLLAFA KECDMVEATHDWEQQYGNLNEEEMLAGVVYE >gi|241318645|gb|ACQV01000031.1| GENE 37 38029 - 39075 1337 348 aa, chain - ## HITS:1 COG:NMB1787 KEGG:ns NR:ns ## COG: NMB1787 COG0002 # Protein_GI_number: 15677627 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 348 1 347 347 570 77.0 1e-162 MTTKIKIGIVGATGYTGIELLRLLSSHPNTEVTAVTSRSEAGIAVADYFPSLRGIYDLAF QTPEEAGLDLCDLVFFATPNGVAMKEAPALVKKGVRVIDLSADFRIRDIPTWEKWYKMTH AAPQLVSQAVYGLCELYRDDIAKAMLVANPGCYPTCVSLPLLPLLQAGRLKANAPLIADC KSGVSGAGRKASTHALLCEAGDNFKAYGVGGHRHLPEIRQTLSGLQDHVSDGLIFVPHLV PMIRGMHATLYLHLQEHTDPEALLREYYRDSPFVDILPSGSTPETRSVRGANLCRISVQK APDQDDVWIVLSVIDNLVKGAAGQAVQNMNIMFDLLETTGLTNAPLMP >gi|241318645|gb|ACQV01000031.1| GENE 38 39254 - 39925 413 223 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760823|ref|ZP_04758914.1| ## NR: gi|241760823|ref|ZP_04758914.1| hypothetical protein NEIFL0001_0178 [Neisseria flavescens SK114] # 1 223 1 223 223 427 100.0 1e-118 MNVNKDFFLARDGHPSLKQFYFIGAPFEKALDLYLKRRMDLSDFYQNLKPKLSYLDEEYT LSQKLDFLNPLEITGSSKYLLLETQSDWSLLIGNNRNGTDFSSVPYEALLWKIRLLTMYL RPYFGKDEFGAVSFTLYEGSKQVSRHDCETRNVMLHKETSRVEFMEYGTPLPFEQTEKYT ERLKKNRLTVEMIEEYCKHLGISLFDLDFYQSKAALIEILRNK >gi|241318645|gb|ACQV01000031.1| GENE 39 39929 - 40177 141 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225076030|ref|ZP_03719229.1| ## NR: gi|225076030|ref|ZP_03719229.1| hypothetical protein NEIFLAOT_01057 [Neisseria flavescens NRL30031/H210] # 1 82 1 82 82 136 95.0 5e-31 MQDDVAYLRSMGAEDIRINQQQVNNQMCRVGICRPDVQATLPNSNKRIYIEYDRTSSNRG AGHASRALSNDPDAIVILRTVD >gi|241318645|gb|ACQV01000031.1| GENE 40 40876 - 42588 2323 570 aa, chain - ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 6 566 12 557 564 419 40.0 1e-116 MNILKKFFYLARPFWSGAHGRLQWLMLAVLIGFTLFSITISVWIAAWDKRFYDALAAFDG ASMPSLIVEYLGYMAMVIGCIVCGDWLQKRLIFRWRTHLTEQFQKNWLEGHKHYRLRLTG EPDNPDQRIAEDIYLLADKSIGLFRSFINNIAKFSAFVAVLWTLSGVQTFNIGGYSITVY GYLVWVALIYSIFSTIIAHLVGRKLKNLNIDRQHREADYRAALLRVRDHAEQIAFYNGGE AETGRLKQRYLRIRDNWRRLTNCEFRQETFWATYVRISIFIPILATLPMYLAKTMTFGDM MQTRTSFARVQDSFGWFTDAYRRLIEWAAVVERLSGFQTALEQVEQKGRSPAYEPAPTLN NRHHSGTLALQNLTVHTQTGSPLLTDINLEAHAPEWVLLEGRSGIGKSTLLRALAGLWPY YQGNFALEGSRLFFPQRPYLPADTLRQTVSYPYTACQDDHLIQTILEQVGLSSPTGRLRT LMNDLDTSHEWHGILSGGEQQRLSLARALLHKPQILFLDEATNQLDDESALMLMQTLKQH LPDTLVIGISHQSKIQALFDSSLNLNEKII >gi|241318645|gb|ACQV01000031.1| GENE 41 42826 - 45045 2497 739 aa, chain - ## HITS:1 COG:PA4168 KEGG:ns NR:ns ## COG: PA4168 COG4773 # Protein_GI_number: 15599363 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 42 739 128 802 802 328 32.0 3e-89 MNHPIRYAYLLAAVPLQLSAQTTEQTEHVDLPTVNVTGQSRTASRDSYTVPVMSTATGLP ISPKDTPQSVSVITRKQMDDSGATTLEDALKTTTGLNIYKQGFQTRFQSRGFDIAQISED GVNSTVCTMCGNNPHDAKQLTDTALYDRIEVVRGATGLRKAQSEPGGSINAIRKRPTVAP LLEFDATADRFGTLRSSADVSGFLSRDNGLRGRAVAVLEKNKSWRKNSDGNKGIIYGVID KQVGENDMLTLSAMYHREKDVPSLFGLPANPDGSDLRLPRDSYLGANWNRADYKKANIFA EWKHYFGDRWNLTTSVDYRRNKSVTEYGYVPQRQNISPAGTLSDGYTGRSDRNNNQWTVQ SDLEGKFDWFGREHEFYAGYEYTKEKFDNMWRGTPLKDGNYPVFSWTGDEIAKPDWNTAR NLEIRKTVPDTHTATIATRLNIADKWHILLGTSYSRWRQSQYLSWMKTPDSHYKKGRFIP YAGITYDITPQQNLYASYTSIFKYSGDYYDINDKLLPPVMGNSYEIGWKGAWNNNKLNTT LALFQTEKHNQPTDTWLGKDLATGNIRPWVRGDRAIYTPVRMESRGIDAEIAGNITDDWQ IFAGYTFNKRRYTSTAAAQTAERNGRGVDFSQHTPRHIFRLNTMYRLPGAAHKWTVGGGV NVQSKSSPIVVNGEKQYLGGYAVWHAAVQYEPSKYTKLSLKVDNLTDKRYYESYAHRATY QGHFYGQPRNVTLNFKWKM >gi|241318645|gb|ACQV01000031.1| GENE 42 45238 - 47445 2702 735 aa, chain - ## HITS:1 COG:PA4168 KEGG:ns NR:ns ## COG: PA4168 COG4773 # Protein_GI_number: 15599363 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 49 735 128 802 802 324 33.0 3e-88 MHHSKKLFKLSTLALCLAALPQAAQAAEEVQQAEVEQVTVVGKNKSLRTESQNSYTVSAL RSTTGLVLSPREIPQSVSVITKKQIEDQGITDLEGALQNATGINVFKSGGRTHFMSRGYF IEQFEEDGIATQLGSPGGFGLGGPAGDPTSATDMAMYDHIEVVRGAAGLTQANNEPGGTV NAVRKKPTAKRQLSADLMANSWGKVNSVFDASGTLSQEHGLRGRFVGSVGSNKTFKDQSG GRDILLYGVMDKDIGDNSKLTWGASYLNQTETPDPDGLPMRADGKEWKRSRYLGADWNEA RLKKYNLFTEFEHYFNDNWKLSSKLDWRKNTSSKEYYTLGGTGNGIGTDGLGTTYSFDRY DAGNRQFTFQNNLTGRIFAFGQNHDLFFMHSYSKENVNSSNRWFDDSSTYDADAFNGSEK AKPDWDSATAKARGGDGRYTTHAFGLGARINPTDKLHIIAGGRYTSWKRDFYWDRNLKDG VAGSSDSLKRNRFVPYAGITYDITPKQSVYAAYTSIFKQTMNRDYNDNLLPPIMGRNYEL GWKGEWNEGRLNTSVALYRTDKDNNNQRVNAKPHAYWEPLNQSSRGLDAEISGSLTDRWQ VYAGYTFNRSTNRSSVTGNVESRRKGYNFSSHTPKHMFRLYTSYILPIDDGKWTVGLGVK SSSKTANSYGSIKQGGYTIWNTNVQYRPSKNLQLGLAVNNLTDKRYYENQYSRAANSGNF YGEPRNAVFSLKWKM >gi|241318645|gb|ACQV01000031.1| GENE 43 47997 - 48281 358 94 aa, chain + ## HITS:1 COG:NMB0981 KEGG:ns NR:ns ## COG: NMB0981 COG0560 # Protein_GI_number: 15676873 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 33 94 34 95 277 72 62.0 2e-13 MKKVLVLQHGDLGACDWSAFGGLVSAPSGKSVLRVPVDDDFELTDDMRAALIAQQIDGAV LPDVAFADLGLIVSDMDSTLITIECVDEIAAVSG >gi|241318645|gb|ACQV01000031.1| GENE 44 48314 - 48826 508 170 aa, chain + ## HITS:1 COG:NMB0981 KEGG:ns NR:ns ## COG: NMB0981 COG0560 # Protein_GI_number: 15676873 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Neisseria meningitidis MC58 # 1 170 108 277 277 255 80.0 3e-68 MRGELDFEQSLRKRVALLAGLDERVLEEVYENVLQLSPGAEFLLEECKRNDVKFMLVSGG FTFFTERLQRRLGLDFHFANVLEVENGKLTGRLKERIIDAQAKTDLLREYRERLGLAPWQ VVAMGDGANDIPMIREAGFGIAYRAKPKTEANADACVRFGGLERIRGWFA >gi|241318645|gb|ACQV01000031.1| GENE 45 48898 - 49605 1081 235 aa, chain - ## HITS:1 COG:HI0735 KEGG:ns NR:ns ## COG: HI0735 COG2908 # Protein_GI_number: 16272676 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 4 229 5 230 237 303 63.0 1e-82 MPIYFIADLHLSESHPQLTALFQKFIQEKAVHAQAVYILGDLFDFWIGDDENSPLVQTIK QTIRSLTVRGIACYFIHGNRDFLIGKAFARDTGMTLLPEYAVIDLFGTPTLLCHGDTLCT DDHSYQKFRRTVHQKWLQRLFLLLPLTLRLNIATKIRKQSKQDKQHKTADIMDVNPAFTH ETVQRFHTPLLIHGHTHRENIHRNADYTRIVLGDWRDNYASILEVDAEGYRFIAL >gi|241318645|gb|ACQV01000031.1| GENE 46 49762 - 51147 1639 461 aa, chain - ## HITS:1 COG:no KEGG:Pput_4813 NR:ns ## KEGG: Pput_4813 # Name: not_defined # Def: LmbE family protein # Organism: P.putida_F1 # Pathway: not_defined # 24 396 58 431 476 218 35.0 3e-55 MFLILTGLILTFFVTLFIITSIIHKKQFAYNTHQDYNYPSLPSTAHATLKGGSLTLPATI RGQDTVIAKLRIKSTWAGLLVLPFVETISSKGKWKQYFEYGAKGVRYINLSDTFSDNDKT IRLEGKYLSLPDQEIELSVYPRENLDGKKILVLAPHADDAELSAYGLYEKHAANSMICTL TASEGGSFHYGNLYGKCDCDTQAQYLQKGRMRVWNSLTVPILAGVPSENILQLGYFDSTL TAMRQNPEKEIKSTKIDTADVDIFRRANTSPLAKYLKPGSTWNSLVDNLGYLIETFQPDI IVSPSPNIDTHPDHQHTTLAAIEALRKINYRRGNLFLHTIHYLSDDFPIGKVGSSLSLPP LAEQPFYFQGIYSHPLDKEEQNRKLLALDAMNDIRPNSDGYMRWSTMIFKGLNKLRHHVL HLDKDLVNRFVRSNEFFYTVPISDLYQEETLKQITYQGKAQ >gi|241318645|gb|ACQV01000031.1| GENE 47 51387 - 53195 2717 602 aa, chain - ## HITS:1 COG:NMA2019 KEGG:ns NR:ns ## COG: NMA2019 COG0173 # Protein_GI_number: 15794899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Neisseria meningitidis Z2491 # 1 602 1 602 602 1188 96.0 0 MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATA DSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDENISEN VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFL NEDEIMDITEGMAKQVFQDALGVDLGVFPRMPYAEAMFYYGSDKPDIRINLKFTELTDLM KTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVNDVSN LSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKAKVVNEAIGALRIKVGL EHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASDPENCLA RAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGL AFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDEKQLRELSLRLRQKAVETK EA >gi|241318645|gb|ACQV01000031.1| GENE 48 53260 - 53961 911 233 aa, chain - ## HITS:1 COG:NMB0465 KEGG:ns NR:ns ## COG: NMB0465 COG2928 # Protein_GI_number: 15676376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 228 1 228 233 329 78.0 3e-90 MTEAAAESGKIAKALKKYLITGVLVWLPIAVTIWAMTYIISAADRLISLLPESWQPQHFW GFNIPGLGIVAATVVLFVTGVFAANVLGRRILGAWDSLLGRIPVVKSIYSSVKKVSESLL SDSSRSFKTPVLVPFPHPGIWTIAFVSGHIPDKLKGSLPQDDDYISVYVPTTPNPTGGYY IMVKKSDVRELEMSVDQALKYVISLGMVMPDDLPVKVLPAQKPSEDGDTEHNN >gi|241318645|gb|ACQV01000031.1| GENE 49 54113 - 55255 1514 380 aa, chain - ## HITS:1 COG:NMA2021 KEGG:ns NR:ns ## COG: NMA2021 COG2829 # Protein_GI_number: 15794901 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Neisseria meningitidis Z2491 # 18 380 50 409 409 576 74.0 1e-164 MNKMLKHSLSIGFIAAAPLAAADTAALHCTTIQDNAIRLACYDNIYSAQLPPQSPLPQAQ TETAKTPVDLEQSVRKSIEKKEAAIVFDNPTHPNISDDVLSETADSYTPLSLMYDLDKND IRGLLSVREHNPMYLMPVWYNSSPNYYPESPSRGVTTQEKFSEQKRLETKMQVSFKSKIA EDLFKTRADVWFGYTQKSDWQIFNQGRKSAPFRNTDYEPEIFITQPVKAELPFGGKLRMV GAGFVHQSNGQSRPESRSWNRVYAMAGMEWGKLTVIPRVWMRAFDQKGDDDDNPDINKYM GYGDLKVQYRLNDKQNVYSVLRYNPKSGRGAVEAAYTFPIKGKLKGVVRGFHGYGESLID YNHKQNGIGFGLMFNDWDGI >gi|241318645|gb|ACQV01000031.1| GENE 50 55423 - 55686 415 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15676374|ref|NP_273510.1| 30S ribosomal protein S20 [Neisseria meningitidis MC58] # 1 87 1 87 87 164 100 1e-39 MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR IADKGVFHKNKAARHKSRLSAKVKALA >gi|241318645|gb|ACQV01000031.1| GENE 51 55995 - 57137 1794 380 aa, chain + ## HITS:1 COG:NMB0462 KEGG:ns NR:ns ## COG: NMB0462 COG0687 # Protein_GI_number: 15676373 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Neisseria meningitidis MC58 # 1 380 80 459 459 677 95.0 0 MKKSVLAVLAALSLAACGGGEKKAEQPQAGSAPAANAEAAATDTLNIYNWSNYVDESTVE DFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFLPRQIEAGAYQKINKDLIP NYKNIDPELLKMLETADPGNQYAVPYFSGVNTLAITAKGKELLGGKLPENGWDLLFKPEY TNKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDLKAAAEVLKTIRPDVKRFSPSII DELARGDICLAAGNGGDLNLAKARSEEVKNNVGVEVLTPKGMGFWIESWLIPADAKNIVN AHKYINYTLDPEVAAKNGIAVTFAPASKPAREKMPAELVNTRSIFPNEQDMKDGFVMPQM SADAKKLSVNLWQKIKVGSN >gi|241318645|gb|ACQV01000031.1| GENE 52 57207 - 57800 293 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760800|ref|ZP_04758891.1| ## NR: gi|241760800|ref|ZP_04758891.1| hypothetical protein NEIFL0001_0197 [Neisseria flavescens SK114] # 149 197 1 49 49 99 100.0 2e-19 MRTIKFVSLSIFSIMLSACSATDPGLFKTNQPLTLEHSELHDNLHLPFSEFSNKWLPIGA VNQTVQQISKALSYLSTSRETQGVKNGERLENYAATDSYGNDRHIIQKAKDTFQAWCAHH SGEIGTPNTYQENYINQVMVSKNTPSSGMYYELSDAYSCTKNGKVVATLAYSEGEVQGLS SNYTFPSVLIFVKDWNK >gi|241318645|gb|ACQV01000031.1| GENE 53 57832 - 58206 149 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|241760833|ref|ZP_04758924.1| ## NR: gi|241760833|ref|ZP_04758924.1| hypothetical protein NEIFL0001_0198 [Neisseria flavescens SK114] # 1 124 144 267 267 225 100.0 7e-58 MTEQGNNLLEARKNLKLQEEKEQQRIYQAREECIRESQLKIEKLQDQLISSWRKNLKIGD TINDINLIINTKGKDLVEIQNRSSGKNYWFKRTEIHPSRQIQNEIDKLTLPFKKAIADCK KNLY >gi|241318645|gb|ACQV01000031.1| GENE 54 58253 - 58336 164 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPEQETFTKELYPVKVKDGKTTASEFG >gi|241318645|gb|ACQV01000031.1| GENE 55 58341 - 58448 79 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRFLIGTTRVIDFSTTIYEIGVNKTTEFGHLTSQI >gi|241318645|gb|ACQV01000031.1| GENE 56 58766 - 59197 712 143 aa, chain - ## HITS:1 COG:NMB1840 KEGG:ns NR:ns ## COG: NMB1840 COG2510 # Protein_GI_number: 15677676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 143 1 143 143 220 95.0 7e-58 MSSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVILAALVLFLTYTGKWQG VNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPVDKFSLVLVALMAVVFLDER PSTQEWVGLGLVTVGVLTLALKR >gi|241318645|gb|ACQV01000031.1| GENE 57 59377 - 61053 2739 558 aa, chain + ## HITS:1 COG:NMA0617 KEGG:ns NR:ns ## COG: NMA0617 COG2759 # Protein_GI_number: 15793607 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Neisseria meningitidis Z2491 # 1 558 1 558 558 1035 97.0 0 MSFKTDAEIAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINPAEAFKLPQKQGRLILV TAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPVFGVKGGAAGGGYAQVLPM EDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPKRVLWRRVVDMNDRQLRNIID GMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKERLGNILVAYAKDGSPVYAKDLK ANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANIAHGCNSVTATRLAKHLADYAVTEA GFGADLGAEKFCDIKCRLADLKPDAAVVVATVRALKYNGGVERANLGEENLDALAKGLPN LLKHISNLKNVFGLPVVVAINRFVSDSDAELAMIEKACAEHGVEVSLTEVWGKGGAGGAD LAHKVVNAIENQPNNFSFAYDVELSIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLG LDKMPVCMAKTQYSLSDNAKLLGCPEGFRITVRGITVSSGAGFIVALCGNMMKMPGLPKV PAAEKIDVDAEGVIHGLF >gi|241318645|gb|ACQV01000031.1| GENE 58 61119 - 61361 337 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261379274|ref|ZP_05983847.1| ## NR: gi|261379274|ref|ZP_05983847.1| glycosyl transferase, group 2 family [Neisseria subflava NJ9703] # 1 80 230 309 309 143 91.0 3e-33 MELWFSHLFPELNPVEVTLLSRILHEKQLRLTTEELKTIFAAYDRISKDRSISLFGEDRN TMFGMIDNFFNLLKSRLKFT >gi|241318645|gb|ACQV01000031.1| GENE 59 61325 - 61819 403 164 aa, chain - ## HITS:1 COG:CAC2174 KEGG:ns NR:ns ## COG: CAC2174 COG0463 # Protein_GI_number: 15895443 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 10 143 86 221 336 70 29.0 1e-12 MDMLKDVEVEYVARMDADDICALDRFEKQIQFLDSHLEIDIVGSQATIFFDDQTGREPVL SDLPLLDKDIKAFLSFAAQNMFNPTTMWRHDSIKNLEINYTATETAPDFHMWVQCALHGK TFANLPESLLSYRIHTTQESKKETKSTDPSNTPWNCGSATFSLN >gi|241318645|gb|ACQV01000031.1| GENE 60 61842 - 62048 258 68 aa, chain - ## HITS:1 COG:L16653 KEGG:ns NR:ns ## COG: L16653 COG0463 # Protein_GI_number: 15672197 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 1 68 1 67 333 75 51.0 2e-14 MKLAVILPAYCAEAYLPECLDSVLNQTFRDFFVIAINDASTDKTGEILEAYAAKDSRLQV FHLPENRG >gi|241318645|gb|ACQV01000031.1| GENE 61 62177 - 63241 1843 354 aa, chain - ## HITS:1 COG:NMA0587 KEGG:ns NR:ns ## COG: NMA0587 COG0191 # Protein_GI_number: 15793578 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Neisseria meningitidis Z2491 # 1 354 1 354 354 694 96.0 0 MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAPVIVQASAGARKYAGAP FLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSVMMDGSLMEDGKTPSSYEY NVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGVGAVGKLSHDQMLTSVEDAVR FVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIKEIHQALPNTHIVMHGSSSVPQE WLKVINEHGGKIGETYGVPVEEIVEGIKHGVRKVNIDTDLRLASTGAIRRFMAENPSEFD PRKYLSKTVEAMKQICLDRYLAFGCEGQADKIKPISLEKMATKYAKGELNQIVK >gi|241318645|gb|ACQV01000031.1| GENE 62 63392 - 63820 263 142 aa, chain + ## HITS:1 COG:no KEGG:Dbac_1354 NR:ns ## KEGG: Dbac_1354 # Name: not_defined # Def: esterase # Organism: D.baculatum # Pathway: not_defined # 1 142 1 142 143 137 52.0 1e-31 MDRISVAECDKPLFQTALAVQVGDVNYGGHLANDAVLRLCHEVRMRWLATLGWSEMDAGG VGLIMADAAVQYLAQGHHGDELSVEMGAAGVAGVGFSLLYRIRRISDGLVLAKVQTGMVC FDYGKQRVCRLPSALKTALEAV >gi|241318645|gb|ACQV01000031.1| GENE 63 63822 - 64718 735 298 aa, chain + ## HITS:1 COG:NMA0588 KEGG:ns NR:ns ## COG: NMA0588 COG4973 # Protein_GI_number: 15793579 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Neisseria meningitidis Z2491 # 7 297 6 303 305 359 62.0 3e-99 MAESNHFALHLELYLKTLLQQGKSEHTVSAYRRDLSELMRLLPDNLENGLPTRRDFVAVL KKLSQKGLSESSLVRKLSVWRQYCSWLVQIEVMESDPTFNMKAPRLPERLPKALPQEPLN HILDHAPVDDELDVRDKAMFELMYGSGLRLSEIQGLNLDGIVLDEGWVSVKGKGGKQRQV PLVAKSIAALRDYLAVRIAKEGEQALFTNKNGGRLGQRQIQKRLQAWAVRVGSASHISPH MMRHSYATHLLQASGDIRAVQELLGHSNLSATQVYTKLDFDHLARVYDEAHPRAKRKK >gi|241318645|gb|ACQV01000031.1| GENE 64 65071 - 66000 775 309 aa, chain + ## HITS:1 COG:NMA1985 KEGG:ns NR:ns ## COG: NMA1985 COG0810 # Protein_GI_number: 15794867 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Neisseria meningitidis Z2491 # 1 308 1 279 280 150 53.0 4e-36 MDKKRILTPAVVTSVALIHVGLVALLWHAHKPPPVEMANIEFVDLGDFGGGDGSPEGEGA PAAPEPTPEQPKPKPKPKPKPVEPPKPVIKPVVTKKEKADIVQQKEKPKPIEKPKPEPKP EPKPEPKPEPKPEPKPESKAEPKPSPKASEHSGSKTGPNTAENGKGNGEGKALGGEGKGN GGGTKGTGSGRGEGSGSGSGGAKGEHGSGTGGGGGGSGTGAGSSKGNPAKGTCHIPRPPY PSLSTENGEEGLVVLKVLVGPGGKVDSISVNKSSGYSRLDNAARKAVKDGSCNASVWTEF KVPVKFTLE >gi|241318645|gb|ACQV01000031.1| GENE 65 66103 - 66762 845 219 aa, chain + ## HITS:1 COG:NMA1984 KEGG:ns NR:ns ## COG: NMA1984 COG0811 # Protein_GI_number: 15794866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Neisseria meningitidis Z2491 # 1 219 1 219 220 317 72.0 9e-87 MDLSLVFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYRKAKKGNAQVKELMLNAFTLA DAVQKAKAVEAPMSRVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSLTQTMRQF DYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVGLF VAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD >gi|241318645|gb|ACQV01000031.1| GENE 66 66766 - 67203 800 145 aa, chain + ## HITS:1 COG:NMA1983 KEGG:ns NR:ns ## COG: NMA1983 COG0848 # Protein_GI_number: 15794865 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Neisseria meningitidis Z2491 # 1 145 1 144 144 211 81.0 5e-55 MAFGSMNSGDDAPMSDINVTPLVDVMLVLLIVFMITMPVLTHSIPLELPTASEKAAKEDK QQPKDPLRLSIDASGAYVVGGDSDTKVDLATVTAKLKEAKAKNEDVIVAIAADKAVEYDY VNQALQAAREAGISKIGFVTETKAQ >gi|241318645|gb|ACQV01000031.1| GENE 67 67764 - 68996 1460 410 aa, chain + ## HITS:1 COG:NMA0766 KEGG:ns NR:ns ## COG: NMA0766 COG0644 # Protein_GI_number: 15793741 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Neisseria meningitidis Z2491 # 1 410 176 585 585 844 94.0 0 MLYHEDGSVKGIATGNMGVGKDGEPTDAFQPGMELWAQQTIFAEGCRGSLSKQVIEQFKL DQNSEPQTYGLGIKEIWEVPSEKHQPGLVMHSAGWPLDSKTYGGSFIYHFDENKVAVGFV VGLDYQNPYLSPFEEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVL IGDAAGFLNMPRIKGIHTAMKSAMLAAEAVFPLLENLEEAESFDSGKEATDYQQRFEQSW LYQELYAARNVRPSFKWGVYLGSVYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAECKPI DYPKPDGVLTFDRLSSVFLANLAHEENQPDHLVLKNPQVMIDVNYKEYASPETRYCPAGV YEIVEENGSPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM >gi|241318645|gb|ACQV01000031.1| GENE 68 69080 - 69931 799 283 aa, chain + ## HITS:1 COG:NMB1691 KEGG:ns NR:ns ## COG: NMB1691 COG0294 # Protein_GI_number: 15677539 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Neisseria meningitidis MC58 # 1 282 1 284 285 436 81.0 1e-122 MNTRIWQAGRFEIALDKPKIMGIVNLTPDSLSDGGTYSQNVSTALAHAEQLLKDGADILD IGGESTRPGSDGVSLEEEWARVQPVLAEVAKWNVPVSLDTRHTAIMEKALAQGGVDIIND VAALSDEGAVALLAQQPKTGVCLMHMQGLPKTMQLNPQYQDVVEEVARYLKARAAECVRA GIAPERITLDPGFGFGKNLQHNITLIQHLPELMDATGFPLLIGISRKSMIGELTGEQNAA KRVHGSVAAALATVARGAQIIRVHDVKATSDALKVWEALGISA >gi|241318645|gb|ACQV01000031.1| GENE 69 70729 - 71187 558 152 aa, chain - ## HITS:1 COG:NMA2048 KEGG:ns NR:ns ## COG: NMA2048 COG1959 # Protein_GI_number: 15794926 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis Z2491 # 1 144 1 144 147 253 84.0 9e-68 MYLTQHTDYGLRVLVYTAINDDSLVNISTIAKTYNISKSHLMKVVTSLVKGGFLVSVRGK GGGLRLADVPEKINIGAVVRHLEPMQVVECMGDNNECLITPSCRLTGIITGAIKAFFNHL DQYSLQDLLDKPTYDILYTPRIPINEISRMVD >gi|241318645|gb|ACQV01000031.1| GENE 70 71334 - 71714 291 126 aa, chain + ## HITS:1 COG:no KEGG:NMCC_1708 NR:ns ## KEGG: NMCC_1708 # Name: not_defined # Def: hypothetical protein # Organism: N.meningitidis_053442 # Pathway: not_defined # 1 121 1 121 122 157 74.0 8e-38 MKPLKRHPALIELSREHHGSLSLCVRLLRTPEQSHQEELDPHFAELEPHFLEEETMFAPY WDKVDPALRKRFEGDHAKLRAMMAHPEYMNESWNKDFAVTLRDHARFEERELFPAIEPFL PLPENV >gi|241318645|gb|ACQV01000031.1| GENE 71 71801 - 72958 933 385 aa, chain + ## HITS:1 COG:NMA2046 KEGG:ns NR:ns ## COG: NMA2046 COG3213 # Protein_GI_number: 15794924 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 6 385 21 400 400 546 82.0 1e-155 MNDLFKHPVWAMAFRPFYSLAALYGALSILLWGFGYQGTPELPGLYWHAHEMIWGYAGLV VIAFLLTAVATWTGQPPTRGKALAGLTAFWLLARLCAFIPGWGATASGIFGTIFFWYGAV CMALPVIRSQNKRNYVAVFAIFVLGGTHFAFHMKMQPFDAIALMTGLQSGLIMVAGFIGL IGMRIISFFTSKRLNVPQIPSPQWVAHASLWLPMLTAMMMAHNILPELAALFSIAAGVIF TVQVYRWWYKAVLKEPMLWILFAGYLFTGLGLIAVGLSYWISSFLNLGVHLIGVGGIGVL TLGMMARTALGHTGNSIYPPPKVVPVAFWLMIAATVIRVLATFVSGTAYIHSIRCSAALF AVSLLLYAWKYIPWLIRPRSDGRPG >gi|241318645|gb|ACQV01000031.1| GENE 72 73154 - 73600 565 148 aa, chain - ## HITS:1 COG:NMA2160 KEGG:ns NR:ns ## COG: NMA2160 COG2707 # Protein_GI_number: 15795031 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 1 147 1 147 148 181 84.0 4e-46 MNFSFVPLFLVTLIFLGVISNNNSITISAAVLLLMQQTALSQYLPLVEKHGLHLGIILLT IGVLSPLVSGKIQIPPVSEFINFKMIAAVLIGILVAWLAGRGVPLMSEQPVLVTGLLIGT VIGVAFLGGIPVGPLIAAGLLSFFAGKV >gi|241318645|gb|ACQV01000031.1| GENE 73 73605 - 74579 1533 324 aa, chain - ## HITS:1 COG:NMA2161 KEGG:ns NR:ns ## COG: NMA2161 COG0142 # Protein_GI_number: 15795032 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 1 324 1 324 324 558 91.0 1e-159 MLENLPYFQRHLPDDLAKVNAVINQAVQSDVALISQIGTYIISAGGKRLRPIITILAGKA VGHDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRKTANNLFGNAAAVLVGDFLYTR AFQLMVGSGSMRILEVMADATNIIAEGEVMQLMNIGNTDITEEQYVQVIQYKTAKLFEAA AQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGKNVGDDLAEGKPTL PLIYLMRNGSEQAANDVRHALENADRSYFEKIHDYVVNSDALPYSISEAKKAVDKAIASL DVLPDSEVKEAMIQLAKESLARVS >gi|241318645|gb|ACQV01000031.1| GENE 74 74830 - 75150 522 106 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|194099559|ref|YP_002002689.1| 50S ribosomal protein L21 [Neisseria gonorrhoeae NCCP11945] # 1 106 1 106 106 205 99 5e-52 MELSMYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADGESVKVGAPFIEG AKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA >gi|241318645|gb|ACQV01000031.1| GENE 75 75178 - 75450 462 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15676241|ref|NP_273373.1| 50S ribosomal protein L27 [Neisseria meningitidis MC58] # 1 90 1 90 90 182 100 5e-45 MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTKFHAGDNVGMGKDHTLF AKVDGYVEFKTKGALNRKTVSIRPYTGSEE >gi|241318645|gb|ACQV01000031.1| GENE 76 75725 - 76909 1596 394 aa, chain + ## HITS:1 COG:NMB0323 KEGG:ns NR:ns ## COG: NMB0323 COG0654 # Protein_GI_number: 15676240 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 394 1 394 394 722 90.0 0 MSLHSDILVVGAGPAGLSFAAELAGSDLNITLIERSPLEVLQNPPYDGREIALTHLSREI MQRLGMWDLIPKDEIYPLRDAKVLNGHSDYQLHFPQPTQARGEPADCLGYLISNHNIRKA AYEVVSKLDNVKILTGTNVKEVKTSDNEAQVILESGEVLTGRLLLAADSRFSQTRRQLGI SSDMHDYSRTMFVCRMKHTLSNLHTAYECFHYGRTIALLPLEEHLTNTVITVDSDKAETI KNMSPEELAASVKEQLKGRLGDMELVSTIHNYPLVGMIAQRFYGKRSALIGDAAVGMHPV TAHGFNLGLASADLLAKLVLEAEQRGQDIGAKSLLEKYSTKHMLHAHPIYHGTNMLLKLF TNETAPAKLLRGLVLRASNNFPPLKKLITKQLTG >gi|241318645|gb|ACQV01000031.1| GENE 77 76977 - 77654 644 225 aa, chain - ## HITS:1 COG:NMA2171 KEGG:ns NR:ns ## COG: NMA2171 COG1738 # Protein_GI_number: 15795042 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 216 1 216 228 318 84.0 5e-87 MYEFTAAQQKKALFWLVLFHIFIIAASNYLVQFPFQIFGIFTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFWVMLPALLLSYVFSVLFHEGNWTGWASLTEFNTFVGRIALASFSAYA LGQILDIFVFNRLRRLKSWWVAPTASTIVGNALDTLVFFAVAFYASNDEFMAANWQSIAF VDYLFKLAICTLFFLPAYGIVLSILTKKLTSLNVRQEMPESVLAK >gi|241318645|gb|ACQV01000031.1| GENE 78 77755 - 77862 175 35 aa, chain - ## HITS:1 COG:NMA2170 KEGG:ns NR:ns ## COG: NMA2170 COG0780 # Protein_GI_number: 15795041 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Neisseria meningitidis Z2491 # 1 35 123 157 157 75 100.0 2e-14 TPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ